AM393_RS08695 603ef65ac24ca46aedf4b5d34feed132 901 Hamap MF_01247 HTH-type transcriptional regulator MalT [malT]. 1 899 39.287 T 28-03-2018 IPR023768 Transcriptional regulator HTH-type, MalT AM393_RS08695 603ef65ac24ca46aedf4b5d34feed132 901 Pfam PF13181 Tetratricopeptide repeat 736 759 0.099 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AM393_RS08695 603ef65ac24ca46aedf4b5d34feed132 901 SUPERFAMILY SSF52540 6 226 1.39E-8 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS08695 603ef65ac24ca46aedf4b5d34feed132 901 Gene3D G3DSA:3.40.50.300 14 292 2.9E-7 T 28-03-2018 AM393_RS08695 603ef65ac24ca46aedf4b5d34feed132 901 Pfam PF00196 Bacterial regulatory proteins, luxR family 835 890 4.2E-20 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS08695 603ef65ac24ca46aedf4b5d34feed132 901 SMART SM00421 833 890 1.2E-21 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS08695 603ef65ac24ca46aedf4b5d34feed132 901 ProSitePatterns PS00622 LuxR-type HTH domain signature. 850 877 - T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS08695 603ef65ac24ca46aedf4b5d34feed132 901 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 836 850 9.5E-11 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS08695 603ef65ac24ca46aedf4b5d34feed132 901 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 850 866 9.5E-11 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS08695 603ef65ac24ca46aedf4b5d34feed132 901 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 866 878 9.5E-11 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS08695 603ef65ac24ca46aedf4b5d34feed132 901 Gene3D G3DSA:1.25.40.10 436 808 1.2E-44 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM393_RS08695 603ef65ac24ca46aedf4b5d34feed132 901 SUPERFAMILY SSF48452 439 803 4.87E-154 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM393_RS08695 603ef65ac24ca46aedf4b5d34feed132 901 SUPERFAMILY SSF46894 828 892 3.3E-17 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM393_RS08695 603ef65ac24ca46aedf4b5d34feed132 901 Gene3D G3DSA:1.10.10.10 833 894 8.1E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS03420 c2fc4770672ca6642b21939439c4e99c 233 Hamap MF_01158 DnaA regulatory inactivator Hda [hda]. 5 233 58.836 T 28-03-2018 IPR022864 DnaA regulatory inactivator Hda, Enterobacteriaceae AM393_RS03420 c2fc4770672ca6642b21939439c4e99c 233 Gene3D G3DSA:1.10.8.60 167 233 3.1E-15 T 28-03-2018 AM393_RS03420 c2fc4770672ca6642b21939439c4e99c 233 SUPERFAMILY SSF52540 18 211 9.32E-23 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS03420 c2fc4770672ca6642b21939439c4e99c 233 Pfam PF00308 Bacterial dnaA protein 17 212 3.0E-17 T 28-03-2018 IPR013317 Chromosomal replication initiator protein DnaA AM393_RS03420 c2fc4770672ca6642b21939439c4e99c 233 TIGRFAM TIGR03420 DnaA_homol_Hda: DnaA regulatory inactivator Hda 6 232 8.3E-84 T 28-03-2018 IPR017788 DnaA regulatory inactivator Hda GO:0032297 AM393_RS03420 c2fc4770672ca6642b21939439c4e99c 233 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 131 158 1.3E-7 T 28-03-2018 IPR020591 Chromosomal replication control, initiator DnaA-like AM393_RS03420 c2fc4770672ca6642b21939439c4e99c 233 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 43 63 1.3E-7 T 28-03-2018 IPR020591 Chromosomal replication control, initiator DnaA-like AM393_RS03420 c2fc4770672ca6642b21939439c4e99c 233 Gene3D G3DSA:3.40.50.300 14 164 1.3E-9 T 28-03-2018 AM393_RS15295 3cf60abb77fdb704275c00f4b9769c3b 128 Hamap MF_01519 UPF0325 protein YaeH [yaeH]. 1 126 32.774 T 28-03-2018 IPR020911 Uncharacterised protein family UPF0325 AM393_RS15295 3cf60abb77fdb704275c00f4b9769c3b 128 Pfam PF11944 Protein of unknown function (DUF3461) 1 125 2.4E-55 T 28-03-2018 IPR020911 Uncharacterised protein family UPF0325 AM393_RS15295 3cf60abb77fdb704275c00f4b9769c3b 128 ProDom PD080106 UPF0325 YAEH STRUCTURAL ECA1027 VV11856 YPTB3007 PBPRA2971 VV2560 VF1965 VC2264 1 125 2.0E-66 T 28-03-2018 IPR020911 Uncharacterised protein family UPF0325 AM393_RS19335 a0ab38e03ef917a8d237cff687da94e1 619 Gene3D G3DSA:3.40.50.300 307 595 1.2E-72 T 28-03-2018 AM393_RS19335 a0ab38e03ef917a8d237cff687da94e1 619 Gene3D G3DSA:3.40.50.300 10 299 1.5E-67 T 28-03-2018 AM393_RS19335 a0ab38e03ef917a8d237cff687da94e1 619 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 540 575 1.2E-8 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AM393_RS19335 a0ab38e03ef917a8d237cff687da94e1 619 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 249 280 2.0E-7 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AM393_RS19335 a0ab38e03ef917a8d237cff687da94e1 619 SUPERFAMILY SSF52540 310 560 8.54E-72 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS19335 a0ab38e03ef917a8d237cff687da94e1 619 SUPERFAMILY SSF52540 13 269 7.34E-62 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS19335 a0ab38e03ef917a8d237cff687da94e1 619 ProSitePatterns PS00211 ABC transporters family signature. 170 184 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS19335 a0ab38e03ef917a8d237cff687da94e1 619 ProSitePatterns PS00211 ABC transporters family signature. 461 475 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS19335 a0ab38e03ef917a8d237cff687da94e1 619 Pfam PF00005 ABC transporter 338 487 9.1E-31 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS19335 a0ab38e03ef917a8d237cff687da94e1 619 Pfam PF00005 ABC transporter 34 197 4.6E-26 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS19335 a0ab38e03ef917a8d237cff687da94e1 619 SMART SM00382 42 247 6.4E-19 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS19335 a0ab38e03ef917a8d237cff687da94e1 619 SMART SM00382 346 538 4.4E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS11305 42a39ee867d3ab9395111012ad761ede 420 SUPERFAMILY SSF48179 206 299 1.0E-28 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AM393_RS11305 42a39ee867d3ab9395111012ad761ede 420 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 5 416 3.8E-119 T 28-03-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 AM393_RS11305 42a39ee867d3ab9395111012ad761ede 420 Gene3D G3DSA:1.20.5.170 206 229 1.0E-14 T 28-03-2018 AM393_RS11305 42a39ee867d3ab9395111012ad761ede 420 SUPERFAMILY SSF52413 311 419 1.05E-24 T 28-03-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AM393_RS11305 42a39ee867d3ab9395111012ad761ede 420 PIRSF PIRSF500136 1 420 4.3E-146 T 28-03-2018 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 AM393_RS11305 42a39ee867d3ab9395111012ad761ede 420 SMART SM00984 324 420 5.7E-24 T 28-03-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AM393_RS11305 42a39ee867d3ab9395111012ad761ede 420 SUPERFAMILY SSF51735 5 198 2.77E-44 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS11305 42a39ee867d3ab9395111012ad761ede 420 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 324 419 1.2E-18 T 28-03-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AM393_RS11305 42a39ee867d3ab9395111012ad761ede 420 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 5 188 8.6E-58 T 28-03-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AM393_RS11305 42a39ee867d3ab9395111012ad761ede 420 Gene3D G3DSA:3.40.50.720 4 205 8.7E-44 T 28-03-2018 AM393_RS11305 42a39ee867d3ab9395111012ad761ede 420 Gene3D G3DSA:3.40.50.720 230 420 1.9E-50 T 28-03-2018 AM393_RS11305 42a39ee867d3ab9395111012ad761ede 420 Hamap MF_02029 UDP-N-acetyl-D-mannosamine dehydrogenase [wecC]. 1 420 80.182 T 28-03-2018 IPR032891 UDP-N-acetyl-D-mannosamine dehydrogenase WecC GO:0009246|GO:0089714 KEGG: 00520+1.1.1.336|MetaCyc: PWY-7335 AM393_RS11305 42a39ee867d3ab9395111012ad761ede 420 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 206 293 5.2E-27 T 28-03-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AM393_RS11305 42a39ee867d3ab9395111012ad761ede 420 PIRSF PIRSF000124 4 419 3.1E-76 T 28-03-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 AM393_RS08625 d8521a76d5088ea0467c0daab9e28465 239 SUPERFAMILY SSF46894 132 234 2.07E-26 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM393_RS08625 d8521a76d5088ea0467c0daab9e28465 239 Pfam PF00072 Response regulator receiver domain 7 117 1.3E-29 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM393_RS08625 d8521a76d5088ea0467c0daab9e28465 239 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 232 2.2E-22 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM393_RS08625 d8521a76d5088ea0467c0daab9e28465 239 Gene3D G3DSA:1.10.10.10 126 239 7.0E-29 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS08625 d8521a76d5088ea0467c0daab9e28465 239 SMART SM00448 5 116 8.6E-45 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM393_RS08625 d8521a76d5088ea0467c0daab9e28465 239 Gene3D G3DSA:3.40.50.2300 2 125 2.0E-38 T 28-03-2018 AM393_RS08625 d8521a76d5088ea0467c0daab9e28465 239 SUPERFAMILY SSF52172 3 126 8.4E-42 T 28-03-2018 IPR011006 CheY-like superfamily AM393_RS08625 d8521a76d5088ea0467c0daab9e28465 239 SMART SM00862 156 232 1.7E-23 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM393_RS18690 b3d421f2a8b998babd2c6c6e1c948d19 289 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 236 249 - T 28-03-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site AM393_RS18690 b3d421f2a8b998babd2c6c6e1c948d19 289 PIRSF PIRSF001553 1 289 8.0E-135 T 28-03-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AM393_RS18690 b3d421f2a8b998babd2c6c6e1c948d19 289 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 4 287 3.1E-146 T 28-03-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AM393_RS18690 b3d421f2a8b998babd2c6c6e1c948d19 289 Pfam PF02629 CoA binding domain 6 99 1.5E-31 T 28-03-2018 IPR003781 CoA-binding GO:0048037 AM393_RS18690 b3d421f2a8b998babd2c6c6e1c948d19 289 SMART SM00881 4 100 3.3E-37 T 28-03-2018 IPR003781 CoA-binding GO:0048037 AM393_RS18690 b3d421f2a8b998babd2c6c6e1c948d19 289 Gene3D G3DSA:3.40.50.720 1 119 9.9E-45 T 28-03-2018 AM393_RS18690 b3d421f2a8b998babd2c6c6e1c948d19 289 Pfam PF00549 CoA-ligase 151 271 7.9E-20 T 28-03-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AM393_RS18690 b3d421f2a8b998babd2c6c6e1c948d19 289 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 288 43.391 T 28-03-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AM393_RS18690 b3d421f2a8b998babd2c6c6e1c948d19 289 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 28-03-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site AM393_RS18690 b3d421f2a8b998babd2c6c6e1c948d19 289 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 1.2E-39 T 28-03-2018 AM393_RS18690 b3d421f2a8b998babd2c6c6e1c948d19 289 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 1.2E-39 T 28-03-2018 AM393_RS18690 b3d421f2a8b998babd2c6c6e1c948d19 289 PRINTS PR01798 Succinyl-CoA synthase signature 240 257 1.2E-39 T 28-03-2018 AM393_RS18690 b3d421f2a8b998babd2c6c6e1c948d19 289 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 1.2E-39 T 28-03-2018 AM393_RS18690 b3d421f2a8b998babd2c6c6e1c948d19 289 Gene3D G3DSA:3.40.50.261 120 289 1.5E-56 T 28-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AM393_RS18690 b3d421f2a8b998babd2c6c6e1c948d19 289 SUPERFAMILY SSF52210 123 287 2.62E-57 T 28-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AM393_RS18690 b3d421f2a8b998babd2c6c6e1c948d19 289 SUPERFAMILY SSF51735 1 122 1.55E-43 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS06330 77c82081632be9c63d9e4e53a9a44083 86 Gene3D G3DSA:1.10.3100.10 1 84 6.2E-16 T 28-03-2018 IPR027910 YdiL-like domain AM393_RS06330 77c82081632be9c63d9e4e53a9a44083 86 SUPERFAMILY SSF47413 2 70 3.94E-13 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM393_RS06330 77c82081632be9c63d9e4e53a9a44083 86 Pfam PF01381 Helix-turn-helix 6 64 3.4E-10 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM393_RS06330 77c82081632be9c63d9e4e53a9a44083 86 SMART SM00530 5 64 1.3E-10 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM393_RS23480 67e87062906533a604ec8d78d508c811 299 SUPERFAMILY SSF103481 206 287 3.92E-8 T 28-03-2018 AM393_RS23480 67e87062906533a604ec8d78d508c811 299 SUPERFAMILY SSF103481 42 134 7.45E-11 T 28-03-2018 AM393_RS23480 67e87062906533a604ec8d78d508c811 299 Pfam PF00892 EamA-like transporter family 7 131 2.2E-15 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM393_RS23480 67e87062906533a604ec8d78d508c811 299 Pfam PF00892 EamA-like transporter family 144 286 8.8E-16 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM393_RS26035 0454a8caa3b4265598b9c351fab5bf51 362 Gene3D G3DSA:3.40.190.10 222 303 5.7E-11 T 28-03-2018 AM393_RS26035 0454a8caa3b4265598b9c351fab5bf51 362 Pfam PF13416 Bacterial extracellular solute-binding protein 59 315 3.4E-22 T 28-03-2018 AM393_RS26035 0454a8caa3b4265598b9c351fab5bf51 362 Gene3D G3DSA:3.40.190.10 1 221 2.6E-20 T 28-03-2018 AM393_RS26035 0454a8caa3b4265598b9c351fab5bf51 362 SUPERFAMILY SSF53850 41 341 2.91E-53 T 28-03-2018 AM393_RS07475 bec9b1372543d841f38973f8f144d473 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 22.415 T 28-03-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS07475 bec9b1372543d841f38973f8f144d473 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 10 88 3.0E-37 T 28-03-2018 AM393_RS07475 bec9b1372543d841f38973f8f144d473 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 6 89 2.2E-40 T 28-03-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS07475 bec9b1372543d841f38973f8f144d473 89 Gene3D G3DSA:1.10.287.10 2 89 6.2E-37 T 28-03-2018 AM393_RS07475 bec9b1372543d841f38973f8f144d473 89 SUPERFAMILY SSF47060 3 89 1.68E-35 T 28-03-2018 IPR009068 S15/NS1, RNA-binding AM393_RS07475 bec9b1372543d841f38973f8f144d473 89 Pfam PF00312 Ribosomal protein S15 8 88 6.6E-38 T 28-03-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM393_RS07475 bec9b1372543d841f38973f8f144d473 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 28-03-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM393_RS07475 bec9b1372543d841f38973f8f144d473 89 SMART SM01387 8 88 3.0E-53 T 28-03-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM393_RS13060 69c13c728e830b7adf131f3490f2c62d 341 Pfam PF02653 Branched-chain amino acid transport system / permease component 57 321 1.1E-48 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AM393_RS13060 69c13c728e830b7adf131f3490f2c62d 341 Gene3D G3DSA:1.10.3470.10 44 327 1.9E-27 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AM393_RS26000 0a0a6ccdca3fa9c87a0293ddd0e704c1 207 Pfam PF00005 ABC transporter 20 154 2.3E-26 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS26000 0a0a6ccdca3fa9c87a0293ddd0e704c1 207 SUPERFAMILY SSF52540 2 186 2.17E-38 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS26000 0a0a6ccdca3fa9c87a0293ddd0e704c1 207 Gene3D G3DSA:3.40.50.300 1 188 8.8E-39 T 28-03-2018 AM393_RS26000 0a0a6ccdca3fa9c87a0293ddd0e704c1 207 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 2 189 4.0E-72 T 28-03-2018 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004|GO:0030288 AM393_RS26000 0a0a6ccdca3fa9c87a0293ddd0e704c1 207 SMART SM00382 26 200 1.4E-4 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS14285 c50db1d66b1798648ba6058b498f1019 171 TIGRFAM TIGR00258 TIGR00258: inosine/xanthosine triphosphatase 7 170 6.0E-67 T 28-03-2018 IPR002786 Non-canonical purine NTP phosphatase AM393_RS14285 c50db1d66b1798648ba6058b498f1019 171 SUPERFAMILY SSF52972 2 167 5.23E-56 T 28-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AM393_RS14285 c50db1d66b1798648ba6058b498f1019 171 Hamap MF_00648 Non-canonical purine NTP phosphatase. 2 171 29.428 T 28-03-2018 IPR002786 Non-canonical purine NTP phosphatase AM393_RS14285 c50db1d66b1798648ba6058b498f1019 171 Pfam PF01931 Protein of unknown function DUF84 7 165 1.5E-52 T 28-03-2018 IPR026533 Non-canonical purine NTP phosphatase/PRRC1 AM393_RS14285 c50db1d66b1798648ba6058b498f1019 171 Gene3D G3DSA:3.90.950.10 1 170 1.7E-60 T 28-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AM393_RS04755 a167e28d8618aae92329761ed851f2ee 50 PRINTS PR00281 Hok/Gef cell toxic protein family signature 5 23 1.8E-11 T 28-03-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 AM393_RS04755 a167e28d8618aae92329761ed851f2ee 50 PRINTS PR00281 Hok/Gef cell toxic protein family signature 25 47 1.8E-11 T 28-03-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 AM393_RS04755 a167e28d8618aae92329761ed851f2ee 50 Pfam PF01848 Hok/gef family 5 46 9.4E-20 T 28-03-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 AM393_RS04755 a167e28d8618aae92329761ed851f2ee 50 ProDom PD005979 PLASMID MEMBRANE TRANSMEMBRANE POST-SEGREGATION KILLING INHERITANCE ALTERING PERMEABILITY STABLE MAINTENANCE 1 49 8.0E-17 T 28-03-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 AM393_RS03245 e6e97a19fd30a44dc03e564f752fb672 467 Gene3D G3DSA:3.30.420.40 2 111 0.23 T 28-03-2018 AM393_RS03245 e6e97a19fd30a44dc03e564f752fb672 467 Pfam PF06277 Ethanolamine utilisation protein EutA 5 465 5.6E-174 T 28-03-2018 IPR009377 Ethanolamine utilisation EutA AM393_RS03245 e6e97a19fd30a44dc03e564f752fb672 467 SUPERFAMILY SSF53067 8 100 1.04E-7 T 28-03-2018 AM393_RS03245 e6e97a19fd30a44dc03e564f752fb672 467 SUPERFAMILY SSF53067 127 266 1.04E-7 T 28-03-2018 AM393_RS03245 e6e97a19fd30a44dc03e564f752fb672 467 PIRSF PIRSF012293 2 467 3.9E-199 T 28-03-2018 IPR009377 Ethanolamine utilisation EutA AM393_RS03245 e6e97a19fd30a44dc03e564f752fb672 467 Gene3D G3DSA:3.30.420.150 125 340 1.5E-8 T 28-03-2018 AM393_RS11640 c151cada59b3f324979f1626133f90aa 320 SUPERFAMILY SSF55681 78 268 2.98E-57 T 28-03-2018 AM393_RS11640 c151cada59b3f324979f1626133f90aa 320 Pfam PF02237 Biotin protein ligase C terminal domain 274 317 6.7E-11 T 28-03-2018 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780 AM393_RS11640 c151cada59b3f324979f1626133f90aa 320 TIGRFAM TIGR00122 birA_repr_reg: biotin operon repressor 7 73 8.7E-28 T 28-03-2018 IPR004409 Biotin operon repressor, helix-turn-helix domain GO:0006355 KEGG: 00780+6.3.4.15 AM393_RS11640 c151cada59b3f324979f1626133f90aa 320 Pfam PF03099 Biotin/lipoate A/B protein ligase family 84 208 3.4E-23 T 28-03-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 AM393_RS11640 c151cada59b3f324979f1626133f90aa 320 Gene3D G3DSA:2.30.30.100 272 318 6.1E-14 T 28-03-2018 AM393_RS11640 c151cada59b3f324979f1626133f90aa 320 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 7 317 32.303 T 28-03-2018 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 AM393_RS11640 c151cada59b3f324979f1626133f90aa 320 Pfam PF08279 HTH domain 10 58 1.6E-12 T 28-03-2018 IPR013196 Helix-turn-helix, type 11 AM393_RS11640 c151cada59b3f324979f1626133f90aa 320 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 81 317 7.7E-81 T 28-03-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780 AM393_RS11640 c151cada59b3f324979f1626133f90aa 320 SUPERFAMILY SSF46785 7 60 2.27E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS11640 c151cada59b3f324979f1626133f90aa 320 Gene3D G3DSA:1.10.10.10 2 64 5.0E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS11640 c151cada59b3f324979f1626133f90aa 320 SUPERFAMILY SSF50037 271 317 1.01E-10 T 28-03-2018 IPR008988 Transcriptional repressor, C-terminal AM393_RS11640 c151cada59b3f324979f1626133f90aa 320 Gene3D G3DSA:3.30.930.10 65 270 7.0E-61 T 28-03-2018 AM393_RS24410 8328ecc3b81351ec058419d7a6faf5ef 255 SUPERFAMILY SSF46689 212 253 6.72E-7 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS24410 8328ecc3b81351ec058419d7a6faf5ef 255 Gene3D G3DSA:2.60.120.10 3 88 5.4E-8 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AM393_RS24410 8328ecc3b81351ec058419d7a6faf5ef 255 SUPERFAMILY SSF51182 22 187 5.78E-14 T 28-03-2018 IPR011051 RmlC-like cupin domain AM393_RS24410 8328ecc3b81351ec058419d7a6faf5ef 255 Gene3D G3DSA:1.10.10.60 108 208 3.0E-8 T 28-03-2018 AM393_RS24410 8328ecc3b81351ec058419d7a6faf5ef 255 Pfam PF02311 AraC-like ligand binding domain 25 114 3.1E-9 T 28-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AM393_RS24410 8328ecc3b81351ec058419d7a6faf5ef 255 SMART SM00342 171 253 1.2E-15 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM393_RS24410 8328ecc3b81351ec058419d7a6faf5ef 255 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 206 249 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM393_RS24410 8328ecc3b81351ec058419d7a6faf5ef 255 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 237 253 4.9E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM393_RS24410 8328ecc3b81351ec058419d7a6faf5ef 255 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 222 237 4.9E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM393_RS24410 8328ecc3b81351ec058419d7a6faf5ef 255 Gene3D G3DSA:1.10.10.60 209 253 6.1E-7 T 28-03-2018 AM393_RS24410 8328ecc3b81351ec058419d7a6faf5ef 255 Pfam PF12833 Helix-turn-helix domain 177 252 7.1E-19 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM393_RS04825 7346a4c021375e7db8911e92722210cd 236 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 8 229 7.9E-91 T 28-03-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 AM393_RS04825 7346a4c021375e7db8911e92722210cd 236 SUPERFAMILY SSF53448 8 227 2.6E-60 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM393_RS04825 7346a4c021375e7db8911e92722210cd 236 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 102 109 - T 28-03-2018 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 AM393_RS04825 7346a4c021375e7db8911e92722210cd 236 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 9 227 1.7E-78 T 28-03-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 AM393_RS04825 7346a4c021375e7db8911e92722210cd 236 Gene3D G3DSA:3.90.550.10 1 236 1.8E-51 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM393_RS04825 7346a4c021375e7db8911e92722210cd 236 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 7 227 44.643 T 28-03-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 AM393_RS15625 04901c2a2b71ab09d43a9fe40d097dea 212 Pfam PF02508 Rnf-Nqr subunit, membrane protein 12 198 8.6E-60 T 28-03-2018 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 AM393_RS15625 04901c2a2b71ab09d43a9fe40d097dea 212 TIGRFAM TIGR01939 nqrD: NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit 8 210 2.1E-104 T 28-03-2018 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 AM393_RS15625 04901c2a2b71ab09d43a9fe40d097dea 212 PIRSF PIRSF006102 6 212 6.8E-69 T 28-03-2018 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 AM393_RS15625 04901c2a2b71ab09d43a9fe40d097dea 212 Hamap MF_00428 Na(+)-translocating NADH-quinone reductase subunit D [nqrD]. 5 210 36.247 T 28-03-2018 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 AM393_RS12850 eccd383750a68b7b41bc04322fb27969 243 SUPERFAMILY SSF75217 69 242 2.75E-49 T 28-03-2018 IPR029028 Alpha/beta knot methyltransferases AM393_RS12850 eccd383750a68b7b41bc04322fb27969 243 Gene3D G3DSA:3.40.1280.10 77 243 1.9E-49 T 28-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AM393_RS12850 eccd383750a68b7b41bc04322fb27969 243 SMART SM00967 4 80 1.4E-21 T 28-03-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 AM393_RS12850 eccd383750a68b7b41bc04322fb27969 243 Pfam PF00588 SpoU rRNA Methylase family 96 236 3.3E-40 T 28-03-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AM393_RS12850 eccd383750a68b7b41bc04322fb27969 243 Gene3D G3DSA:3.30.1330.30 1 76 3.2E-18 T 28-03-2018 IPR029064 50S ribosomal protein L30e-like AM393_RS12850 eccd383750a68b7b41bc04322fb27969 243 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 2 243 44.507 T 28-03-2018 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB AM393_RS12850 eccd383750a68b7b41bc04322fb27969 243 SUPERFAMILY SSF55315 2 76 4.59E-21 T 28-03-2018 IPR029064 50S ribosomal protein L30e-like AM393_RS12850 eccd383750a68b7b41bc04322fb27969 243 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 1 242 1.9E-92 T 28-03-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 AM393_RS12850 eccd383750a68b7b41bc04322fb27969 243 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 5 77 3.6E-19 T 28-03-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 AM393_RS00240 7aa93faa121eea1bd7789fb691847583 479 PIRSF PIRSF005522 1 478 9.7E-233 T 28-03-2018 IPR016450 Uncharacterised conserved protein UCP005522 AM393_RS00240 7aa93faa121eea1bd7789fb691847583 479 Pfam PF14403 Circularly permuted ATP-grasp type 2 78 451 2.2E-162 T 28-03-2018 IPR025841 Circularly permuted ATP-grasp type 2 AM393_RS00240 7aa93faa121eea1bd7789fb691847583 479 SUPERFAMILY SSF56059 20 216 2.42E-64 T 28-03-2018 AM393_RS00240 7aa93faa121eea1bd7789fb691847583 479 SUPERFAMILY SSF56059 321 466 2.42E-64 T 28-03-2018 AM393_RS00240 7aa93faa121eea1bd7789fb691847583 479 Gene3D G3DSA:3.30.470.20 43 256 0.24 T 28-03-2018 AM393_RS00240 7aa93faa121eea1bd7789fb691847583 479 Gene3D G3DSA:3.30.470.20 340 467 2.8E-4 T 28-03-2018 AM393_RS27545 03c6743718ea82b403684270b4907939 583 TIGRFAM TIGR00345 GET3_arsA_TRC40: transport-energizing ATPase, TRC40/GET3/ArsA family 12 293 3.9E-96 T 28-03-2018 IPR016300 Arsenical pump ATPase, ArsA/GET3 GO:0005524|GO:0016887 Reactome: R-HSA-381038 AM393_RS27545 03c6743718ea82b403684270b4907939 583 Pfam PF02374 Anion-transporting ATPase 329 476 1.4E-31 T 28-03-2018 IPR025723 Anion-transporting ATPase-like domain Reactome: R-HSA-381038 AM393_RS27545 03c6743718ea82b403684270b4907939 583 Pfam PF02374 Anion-transporting ATPase 483 581 9.3E-7 T 28-03-2018 IPR025723 Anion-transporting ATPase-like domain Reactome: R-HSA-381038 AM393_RS27545 03c6743718ea82b403684270b4907939 583 Pfam PF02374 Anion-transporting ATPase 10 292 1.3E-88 T 28-03-2018 IPR025723 Anion-transporting ATPase-like domain Reactome: R-HSA-381038 AM393_RS27545 03c6743718ea82b403684270b4907939 583 PIRSF PIRSF001327 1 583 5.9E-266 T 28-03-2018 IPR027541 Arsenical pump-driving ATPase GO:0005524|GO:0015446|GO:0016887|GO:0071722 MetaCyc: PWY-4621 AM393_RS27545 03c6743718ea82b403684270b4907939 583 SUPERFAMILY SSF52540 326 575 9.46E-46 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS27545 03c6743718ea82b403684270b4907939 583 TIGRFAM TIGR04291 arsen_driv_ArsA: arsenical pump-driving ATPase 7 570 3.9E-286 T 28-03-2018 IPR027541 Arsenical pump-driving ATPase GO:0005524|GO:0015446|GO:0016887|GO:0071722 MetaCyc: PWY-4621 AM393_RS27545 03c6743718ea82b403684270b4907939 583 SUPERFAMILY SSF52540 7 286 4.73E-53 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS27545 03c6743718ea82b403684270b4907939 583 Gene3D G3DSA:3.40.50.300 1 294 5.3E-65 T 28-03-2018 AM393_RS27545 03c6743718ea82b403684270b4907939 583 Gene3D G3DSA:3.40.50.300 311 582 1.4E-47 T 28-03-2018 AM393_RS12625 314e33d5a74bc5d2e8a15d44e7eca182 428 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 275 296 3.1E-10 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AM393_RS12625 314e33d5a74bc5d2e8a15d44e7eca182 428 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 80 100 3.1E-10 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AM393_RS12625 314e33d5a74bc5d2e8a15d44e7eca182 428 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 309 333 3.1E-10 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AM393_RS12625 314e33d5a74bc5d2e8a15d44e7eca182 428 Gene3D G3DSA:2.40.50.100 68 175 8.4E-10 T 28-03-2018 AM393_RS12625 314e33d5a74bc5d2e8a15d44e7eca182 428 Gene3D G3DSA:2.40.50.100 261 373 9.2E-5 T 28-03-2018 AM393_RS12625 314e33d5a74bc5d2e8a15d44e7eca182 428 SUPERFAMILY SSF51230 67 106 8.79E-5 T 28-03-2018 IPR011053 Single hybrid motif AM393_RS12625 314e33d5a74bc5d2e8a15d44e7eca182 428 ProSitePatterns PS00543 HlyD family secretion proteins signature. 390 412 - T 28-03-2018 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 AM393_RS12625 314e33d5a74bc5d2e8a15d44e7eca182 428 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 255 342 9.6E-8 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AM393_RS12625 314e33d5a74bc5d2e8a15d44e7eca182 428 Pfam PF13533 Biotin-lipoyl like 69 104 1.7E-6 T 28-03-2018 AM393_RS12625 314e33d5a74bc5d2e8a15d44e7eca182 428 Pfam PF00529 HlyD membrane-fusion protein of T1SS 151 401 1.9E-9 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AM393_RS05295 43dd04c2381839e5bb0017e93aceddb0 91 Pfam PF03319 Ethanolamine utilisation protein EutN/carboxysome 1 87 1.2E-30 T 28-03-2018 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml AM393_RS05295 43dd04c2381839e5bb0017e93aceddb0 91 SUPERFAMILY SSF159133 1 89 1.29E-26 T 28-03-2018 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml AM393_RS05295 43dd04c2381839e5bb0017e93aceddb0 91 Gene3D G3DSA:2.40.50.220 1 91 3.4E-31 T 28-03-2018 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml AM393_RS05295 43dd04c2381839e5bb0017e93aceddb0 91 ProDom PD012510 UTILIZATION ETHANOLAMINE CARBOXYSOME CCML PEPTIDE EUTN/CARBOXYSOME STRUCTURAL EUTN A B 11 87 2.0E-30 T 28-03-2018 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml AM393_RS13995 d00bcf7c4971225c0fc362f497fdde1a 287 Gene3D G3DSA:1.10.10.10 1 81 4.2E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS13995 d00bcf7c4971225c0fc362f497fdde1a 287 SUPERFAMILY SSF46689 5 79 8.42E-17 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS13995 d00bcf7c4971225c0fc362f497fdde1a 287 Pfam PF01380 SIS domain 124 252 3.6E-19 T 28-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AM393_RS13995 d00bcf7c4971225c0fc362f497fdde1a 287 Gene3D G3DSA:3.40.50.10490 89 281 9.3E-32 T 28-03-2018 AM393_RS13995 d00bcf7c4971225c0fc362f497fdde1a 287 Pfam PF01418 Helix-turn-helix domain, rpiR family 10 79 3.3E-15 T 28-03-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 AM393_RS13995 d00bcf7c4971225c0fc362f497fdde1a 287 SUPERFAMILY SSF53697 96 277 5.01E-36 T 28-03-2018 AM393_RS22990 a51dc0056e25a0c2e119a586baf825a3 481 PIRSF PIRSF037227 1 481 4.7E-222 T 28-03-2018 IPR017145 Aminobenzoyl-glutamate utilization protein B AM393_RS22990 a51dc0056e25a0c2e119a586baf825a3 481 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 20 433 2.8E-115 T 28-03-2018 IPR017439 Amidohydrolase GO:0016787 AM393_RS22990 a51dc0056e25a0c2e119a586baf825a3 481 SUPERFAMILY SSF53187 300 329 6.62E-56 T 28-03-2018 AM393_RS22990 a51dc0056e25a0c2e119a586baf825a3 481 SUPERFAMILY SSF53187 384 448 6.62E-56 T 28-03-2018 AM393_RS22990 a51dc0056e25a0c2e119a586baf825a3 481 SUPERFAMILY SSF53187 6 200 6.62E-56 T 28-03-2018 AM393_RS22990 a51dc0056e25a0c2e119a586baf825a3 481 Gene3D G3DSA:3.40.630.10 3 300 9.3E-44 T 28-03-2018 AM393_RS22990 a51dc0056e25a0c2e119a586baf825a3 481 Gene3D G3DSA:3.40.630.10 373 465 1.1E-8 T 28-03-2018 AM393_RS22990 a51dc0056e25a0c2e119a586baf825a3 481 SUPERFAMILY SSF55031 192 293 1.21E-17 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain AM393_RS22990 a51dc0056e25a0c2e119a586baf825a3 481 Pfam PF07687 Peptidase dimerisation domain 192 279 4.7E-5 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain AM393_RS20635 f2a31c189288ed832ef8f4222feeab18 306 PIRSF PIRSF026649 2 306 5.7E-109 T 28-03-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 AM393_RS20635 f2a31c189288ed832ef8f4222feeab18 306 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 5 306 6.4E-147 T 28-03-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24 AM393_RS20635 f2a31c189288ed832ef8f4222feeab18 306 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 4 306 51.308 T 28-03-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24 AM393_RS20635 f2a31c189288ed832ef8f4222feeab18 306 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 5 297 2.2E-117 T 28-03-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 AM393_RS07865 4a727059a4652f2364c56b2e813ebdef 193 Hamap MF_00528 Septum formation protein Maf [maf]. 3 189 32.437 T 28-03-2018 IPR003697 Maf-like protein GO:0047429 AM393_RS07865 4a727059a4652f2364c56b2e813ebdef 193 Pfam PF02545 Maf-like protein 4 184 1.4E-59 T 28-03-2018 IPR003697 Maf-like protein GO:0047429 AM393_RS07865 4a727059a4652f2364c56b2e813ebdef 193 SUPERFAMILY SSF52972 2 184 4.58E-64 T 28-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AM393_RS07865 4a727059a4652f2364c56b2e813ebdef 193 TIGRFAM TIGR00172 maf: septum formation protein Maf 2 182 1.0E-70 T 28-03-2018 IPR003697 Maf-like protein GO:0047429 AM393_RS07865 4a727059a4652f2364c56b2e813ebdef 193 PIRSF PIRSF006305 1 191 6.4E-57 T 28-03-2018 IPR003697 Maf-like protein GO:0047429 AM393_RS07865 4a727059a4652f2364c56b2e813ebdef 193 Gene3D G3DSA:3.90.950.10 1 188 3.2E-71 T 28-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AM393_RS18310 5d8cf6c2257b3ead40fa7007f0c1d3dc 370 Pfam PF01098 Cell cycle protein 20 364 7.8E-125 T 28-03-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 AM393_RS18310 5d8cf6c2257b3ead40fa7007f0c1d3dc 370 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 321 345 - T 28-03-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 AM393_RS18310 5d8cf6c2257b3ead40fa7007f0c1d3dc 370 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 17 364 4.8E-137 T 28-03-2018 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 AM393_RS00275 038057f88873318c65238aa65f0c8351 577 Pfam PF02080 TrkA-C domain 421 483 1.0E-10 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AM393_RS00275 038057f88873318c65238aa65f0c8351 577 SUPERFAMILY SSF56176 497 571 4.46E-9 T 28-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AM393_RS00275 038057f88873318c65238aa65f0c8351 577 Pfam PF00999 Sodium/hydrogen exchanger family 15 388 6.7E-59 T 28-03-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AM393_RS00275 038057f88873318c65238aa65f0c8351 577 SUPERFAMILY SSF116726 419 483 3.01E-10 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AM393_RS00275 038057f88873318c65238aa65f0c8351 577 SMART SM01091 492 573 1.6E-14 T 28-03-2018 IPR005170 Transporter-associated domain AM393_RS00275 038057f88873318c65238aa65f0c8351 577 Gene3D G3DSA:3.30.465.10 480 575 3.7E-8 T 28-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AM393_RS00275 038057f88873318c65238aa65f0c8351 577 Hamap MF_01075 K(+)/H(+) antiporter NhaP2 [nhaP2]. 1 576 49.646 T 28-03-2018 IPR023729 K(+)/H(+) antiporter NhaP2 GO:0005451|GO:0006812|GO:0006813|GO:0006884|GO:0016021 AM393_RS00275 038057f88873318c65238aa65f0c8351 577 Pfam PF03471 Transporter associated domain 493 571 6.9E-10 T 28-03-2018 IPR005170 Transporter-associated domain AM393_RS00275 038057f88873318c65238aa65f0c8351 577 Gene3D G3DSA:3.30.70.1450 415 479 1.3E-11 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AM393_RS15660 c1acc742364e3dd40e8965a50958f984 485 PIRSF PIRSF016599 1 485 1.1E-211 T 28-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AM393_RS15660 c1acc742364e3dd40e8965a50958f984 485 TIGRFAM TIGR01893 aa-his-dipept: Xaa-His dipeptidase 8 482 6.7E-182 T 28-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AM393_RS15660 c1acc742364e3dd40e8965a50958f984 485 SUPERFAMILY SSF53187 10 182 7.38E-63 T 28-03-2018 AM393_RS15660 c1acc742364e3dd40e8965a50958f984 485 SUPERFAMILY SSF53187 397 481 7.38E-63 T 28-03-2018 AM393_RS15660 c1acc742364e3dd40e8965a50958f984 485 Pfam PF01546 Peptidase family M20/M25/M40 72 480 8.3E-20 T 28-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 AM393_RS15660 c1acc742364e3dd40e8965a50958f984 485 PRINTS PR00934 X-His dipeptidase (M25) signature 428 444 2.3E-102 T 28-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AM393_RS15660 c1acc742364e3dd40e8965a50958f984 485 PRINTS PR00934 X-His dipeptidase (M25) signature 80 99 2.3E-102 T 28-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AM393_RS15660 c1acc742364e3dd40e8965a50958f984 485 PRINTS PR00934 X-His dipeptidase (M25) signature 450 472 2.3E-102 T 28-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AM393_RS15660 c1acc742364e3dd40e8965a50958f984 485 PRINTS PR00934 X-His dipeptidase (M25) signature 363 381 2.3E-102 T 28-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AM393_RS15660 c1acc742364e3dd40e8965a50958f984 485 PRINTS PR00934 X-His dipeptidase (M25) signature 206 223 2.3E-102 T 28-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AM393_RS15660 c1acc742364e3dd40e8965a50958f984 485 PRINTS PR00934 X-His dipeptidase (M25) signature 101 119 2.3E-102 T 28-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AM393_RS15660 c1acc742364e3dd40e8965a50958f984 485 PRINTS PR00934 X-His dipeptidase (M25) signature 135 152 2.3E-102 T 28-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AM393_RS15660 c1acc742364e3dd40e8965a50958f984 485 PRINTS PR00934 X-His dipeptidase (M25) signature 159 177 2.3E-102 T 28-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AM393_RS15660 c1acc742364e3dd40e8965a50958f984 485 PRINTS PR00934 X-His dipeptidase (M25) signature 251 270 2.3E-102 T 28-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AM393_RS15660 c1acc742364e3dd40e8965a50958f984 485 Gene3D G3DSA:3.40.630.10 5 483 8.2E-50 T 28-03-2018 AM393_RS15660 c1acc742364e3dd40e8965a50958f984 485 Pfam PF07687 Peptidase dimerisation domain 203 293 1.2E-8 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain AM393_RS01660 63eb7ad546ca9dad55d826346d516ddd 355 Gene3D G3DSA:3.40.50.1000 4 157 4.1E-23 T 28-03-2018 IPR023214 HAD-like domain AM393_RS01660 63eb7ad546ca9dad55d826346d516ddd 355 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 319 331 - T 28-03-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 AM393_RS01660 63eb7ad546ca9dad55d826346d516ddd 355 SUPERFAMILY SSF56784 1 156 1.25E-37 T 28-03-2018 IPR023214 HAD-like domain AM393_RS01660 63eb7ad546ca9dad55d826346d516ddd 355 SUPERFAMILY SSF54211 252 342 1.26E-32 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM393_RS01660 63eb7ad546ca9dad55d826346d516ddd 355 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 5 144 3.1E-44 T 28-03-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 AM393_RS01660 63eb7ad546ca9dad55d826346d516ddd 355 Hamap MF_01022 Histidine biosynthesis bifunctional protein HisB [hisB]. 2 355 50.644 T 28-03-2018 IPR020566 Histidine biosynthesis bifunctional protein HisB GO:0000105|GO:0004401|GO:0004424 KEGG: 00340+4.2.1.19+3.1.3.15 AM393_RS01660 63eb7ad546ca9dad55d826346d516ddd 355 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 167 355 37.213 T 28-03-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 AM393_RS01660 63eb7ad546ca9dad55d826346d516ddd 355 Gene3D G3DSA:3.30.230.40 164 253 3.3E-33 T 28-03-2018 AM393_RS01660 63eb7ad546ca9dad55d826346d516ddd 355 Gene3D G3DSA:3.30.230.40 255 355 2.8E-31 T 28-03-2018 AM393_RS01660 63eb7ad546ca9dad55d826346d516ddd 355 SUPERFAMILY SSF54211 167 251 1.26E-30 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM393_RS01660 63eb7ad546ca9dad55d826346d516ddd 355 TIGRFAM TIGR01261 hisB_Nterm: histidinol-phosphatase 3 162 9.6E-78 T 28-03-2018 IPR005954 Histidinol-phosphatase GO:0000105|GO:0004401|GO:0004424|GO:0005737 KEGG: 00340+4.2.1.19+3.1.3.15 AM393_RS01660 63eb7ad546ca9dad55d826346d516ddd 355 Pfam PF08645 Polynucleotide kinase 3 phosphatase 8 132 3.6E-5 T 28-03-2018 IPR013954 Polynucleotide kinase 3 phosphatase Reactome: R-HSA-5649702 AM393_RS01660 63eb7ad546ca9dad55d826346d516ddd 355 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 226 239 - T 28-03-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 AM393_RS01660 63eb7ad546ca9dad55d826346d516ddd 355 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 196 337 1.4E-64 T 28-03-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 AM393_RS01660 63eb7ad546ca9dad55d826346d516ddd 355 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 4 147 3.7E-25 T 28-03-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 AM393_RS14250 b934a5a2172118dcf09edadd6a5d79aa 323 Gene3D G3DSA:1.10.150.210 124 170 2.2E-22 T 28-03-2018 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|Reactome: R-HSA-977347 AM393_RS14250 b934a5a2172118dcf09edadd6a5d79aa 323 Pfam PF12710 haloacid dehalogenase-like hydrolase 144 281 6.0E-18 T 28-03-2018 AM393_RS14250 b934a5a2172118dcf09edadd6a5d79aa 323 Gene3D G3DSA:3.40.50.1000 171 316 5.1E-29 T 28-03-2018 IPR023214 HAD-like domain AM393_RS14250 b934a5a2172118dcf09edadd6a5d79aa 323 SUPERFAMILY SSF56784 110 317 7.05E-49 T 28-03-2018 IPR023214 HAD-like domain AM393_RS14250 b934a5a2172118dcf09edadd6a5d79aa 323 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 98 316 2.1E-93 T 28-03-2018 AM393_RS14250 b934a5a2172118dcf09edadd6a5d79aa 323 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 113 284 1.2E-26 T 28-03-2018 AM393_RS22295 ec08679d9ac08619456f68be2c62624f 163 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 5 158 1.9E-48 T 28-03-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 AM393_RS22295 ec08679d9ac08619456f68be2c62624f 163 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 7 157 8.0E-53 T 28-03-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 AM393_RS22295 ec08679d9ac08619456f68be2c62624f 163 PIRSF PIRSF028301 1 163 9.2E-52 T 28-03-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 AM393_RS00260 3b70c4c38cea18dc5f1b705aebe56d93 706 SUPERFAMILY SSF56935 24 706 1.18E-136 T 28-03-2018 AM393_RS00260 3b70c4c38cea18dc5f1b705aebe56d93 706 Pfam PF07715 TonB-dependent Receptor Plug Domain 64 168 4.9E-24 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM393_RS00260 3b70c4c38cea18dc5f1b705aebe56d93 706 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 35 - T 28-03-2018 IPR010916 TonB box, conserved site AM393_RS00260 3b70c4c38cea18dc5f1b705aebe56d93 706 Gene3D G3DSA:2.170.130.10 21 175 9.9E-33 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM393_RS00260 3b70c4c38cea18dc5f1b705aebe56d93 706 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 689 706 - T 28-03-2018 IPR010917 TonB-dependent receptor, conserved site AM393_RS00260 3b70c4c38cea18dc5f1b705aebe56d93 706 Pfam PF00593 TonB dependent receptor 266 704 1.1E-48 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM393_RS00260 3b70c4c38cea18dc5f1b705aebe56d93 706 Gene3D G3DSA:2.40.170.20 181 706 1.3E-82 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM393_RS00260 3b70c4c38cea18dc5f1b705aebe56d93 706 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 65 706 3.1E-142 T 28-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AM393_RS04255 6d49b961bd1142444f95596ccdc751c3 115 Pfam PF05957 Bacterial protein of unknown function (DUF883) 16 114 1.3E-23 T 28-03-2018 IPR010279 Protein of unknown function DUF883, ElaB AM393_RS04255 6d49b961bd1142444f95596ccdc751c3 115 Gene3D G3DSA:1.10.287.1060 6 85 1.5E-4 T 28-03-2018 AM393_RS15415 2fc5757745f7e5e2f8d4c7d3297dd290 433 Pfam PF01171 PP-loop family 15 191 1.9E-57 T 28-03-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 AM393_RS15415 2fc5757745f7e5e2f8d4c7d3297dd290 433 Pfam PF09179 TilS substrate binding domain 241 308 3.4E-20 T 28-03-2018 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AM393_RS15415 2fc5757745f7e5e2f8d4c7d3297dd290 433 Pfam PF11734 TilS substrate C-terminal domain 356 428 1.3E-23 T 28-03-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AM393_RS15415 2fc5757745f7e5e2f8d4c7d3297dd290 433 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 356 401 4.0E-16 T 28-03-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AM393_RS15415 2fc5757745f7e5e2f8d4c7d3297dd290 433 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 15 196 6.7E-51 T 28-03-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AM393_RS15415 2fc5757745f7e5e2f8d4c7d3297dd290 433 SUPERFAMILY SSF56037 317 428 8.11E-29 T 28-03-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 AM393_RS15415 2fc5757745f7e5e2f8d4c7d3297dd290 433 Gene3D G3DSA:3.40.50.620 7 220 4.5E-40 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM393_RS15415 2fc5757745f7e5e2f8d4c7d3297dd290 433 SUPERFAMILY SSF52402 7 225 1.37E-62 T 28-03-2018 AM393_RS15415 2fc5757745f7e5e2f8d4c7d3297dd290 433 SMART SM00977 356 428 3.6E-23 T 28-03-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AM393_RS15415 2fc5757745f7e5e2f8d4c7d3297dd290 433 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 5 300 23.464 T 28-03-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AM393_RS15415 2fc5757745f7e5e2f8d4c7d3297dd290 433 SUPERFAMILY SSF82829 227 311 3.14E-26 T 28-03-2018 AM393_RS11715 de6ddd0dd22e43848530d61cc6fd9fdd 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 151 225 2.3E-7 T 28-03-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM393_RS11715 de6ddd0dd22e43848530d61cc6fd9fdd 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 340 454 1.3E-15 T 28-03-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM393_RS11715 de6ddd0dd22e43848530d61cc6fd9fdd 1342 Gene3D G3DSA:3.90.1800.10 1267 1313 7.2E-12 T 28-03-2018 AM393_RS11715 de6ddd0dd22e43848530d61cc6fd9fdd 1342 Pfam PF04563 RNA polymerase beta subunit 26 500 3.4E-58 T 28-03-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM393_RS11715 de6ddd0dd22e43848530d61cc6fd9fdd 1342 Gene3D G3DSA:2.40.50.150 814 949 4.1E-29 T 28-03-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM393_RS11715 de6ddd0dd22e43848530d61cc6fd9fdd 1342 Gene3D G3DSA:3.90.1100.10 430 645 1.3E-80 T 28-03-2018 AM393_RS11715 de6ddd0dd22e43848530d61cc6fd9fdd 1342 Gene3D G3DSA:3.90.1100.10 646 713 2.2E-14 T 28-03-2018 AM393_RS11715 de6ddd0dd22e43848530d61cc6fd9fdd 1342 Gene3D G3DSA:2.40.270.10 1020 1242 6.6E-80 T 28-03-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM393_RS11715 de6ddd0dd22e43848530d61cc6fd9fdd 1342 SUPERFAMILY SSF64484 343 939 0.0 T 28-03-2018 AM393_RS11715 de6ddd0dd22e43848530d61cc6fd9fdd 1342 SUPERFAMILY SSF64484 12 226 0.0 T 28-03-2018 AM393_RS11715 de6ddd0dd22e43848530d61cc6fd9fdd 1342 SUPERFAMILY SSF64484 1039 1341 0.0 T 28-03-2018 AM393_RS11715 de6ddd0dd22e43848530d61cc6fd9fdd 1342 Gene3D G3DSA:2.40.50.100 715 795 4.0E-27 T 28-03-2018 AM393_RS11715 de6ddd0dd22e43848530d61cc6fd9fdd 1342 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 8 1339 0.0 T 28-03-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM393_RS11715 de6ddd0dd22e43848530d61cc6fd9fdd 1342 Gene3D G3DSA:3.90.1110.10 148 429 3.0E-67 T 28-03-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM393_RS11715 de6ddd0dd22e43848530d61cc6fd9fdd 1342 Pfam PF10385 RNA polymerase beta subunit external 1 domain 591 656 5.4E-28 T 28-03-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM393_RS11715 de6ddd0dd22e43848530d61cc6fd9fdd 1342 Pfam PF04560 RNA polymerase Rpb2, domain 7 1266 1340 1.9E-27 T 28-03-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM393_RS11715 de6ddd0dd22e43848530d61cc6fd9fdd 1342 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1063 1075 - T 28-03-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM393_RS11715 de6ddd0dd22e43848530d61cc6fd9fdd 1342 Pfam PF04565 RNA polymerase Rpb2, domain 3 513 580 1.5E-30 T 28-03-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM393_RS11715 de6ddd0dd22e43848530d61cc6fd9fdd 1342 Pfam PF00562 RNA polymerase Rpb2, domain 6 717 1264 2.1E-158 T 28-03-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM393_RS11715 de6ddd0dd22e43848530d61cc6fd9fdd 1342 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1342 12.348 T 28-03-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM393_RS26620 2245ab33827c1643267ddbea86beea7a 544 PIRSF PIRSF002741 1 543 9.7E-108 T 28-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AM393_RS26620 2245ab33827c1643267ddbea86beea7a 544 Gene3D G3DSA:3.10.105.10 313 513 5.1E-56 T 28-03-2018 AM393_RS26620 2245ab33827c1643267ddbea86beea7a 544 Gene3D G3DSA:3.90.76.10 63 176 7.1E-35 T 28-03-2018 AM393_RS26620 2245ab33827c1643267ddbea86beea7a 544 SUPERFAMILY SSF53850 35 526 4.29E-145 T 28-03-2018 AM393_RS26620 2245ab33827c1643267ddbea86beea7a 544 Gene3D G3DSA:3.40.190.10 177 312 9.6E-36 T 28-03-2018 AM393_RS26620 2245ab33827c1643267ddbea86beea7a 544 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 83 464 8.0E-86 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain AM393_RS26620 2245ab33827c1643267ddbea86beea7a 544 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 88 109 - T 28-03-2018 IPR023765 Solute-binding protein family 5, conserved site AM393_RS15195 4e9d03c043552091bdf2f52a7f5cb72b 657 PRINTS PR00811 Bacterial general secretion pathway protein D signature 579 593 4.9E-44 T 28-03-2018 IPR001775 GspD/PilQ family AM393_RS15195 4e9d03c043552091bdf2f52a7f5cb72b 657 PRINTS PR00811 Bacterial general secretion pathway protein D signature 458 468 4.9E-44 T 28-03-2018 IPR001775 GspD/PilQ family AM393_RS15195 4e9d03c043552091bdf2f52a7f5cb72b 657 PRINTS PR00811 Bacterial general secretion pathway protein D signature 556 574 4.9E-44 T 28-03-2018 IPR001775 GspD/PilQ family AM393_RS15195 4e9d03c043552091bdf2f52a7f5cb72b 657 PRINTS PR00811 Bacterial general secretion pathway protein D signature 343 353 4.9E-44 T 28-03-2018 IPR001775 GspD/PilQ family AM393_RS15195 4e9d03c043552091bdf2f52a7f5cb72b 657 PRINTS PR00811 Bacterial general secretion pathway protein D signature 423 447 4.9E-44 T 28-03-2018 IPR001775 GspD/PilQ family AM393_RS15195 4e9d03c043552091bdf2f52a7f5cb72b 657 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 30 599 7.6E-166 T 28-03-2018 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 AM393_RS15195 4e9d03c043552091bdf2f52a7f5cb72b 657 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 537 570 - T 28-03-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 AM393_RS15195 4e9d03c043552091bdf2f52a7f5cb72b 657 Pfam PF00263 Bacterial type II and III secretion system protein 427 592 4.3E-50 T 28-03-2018 IPR004846 Type II/III secretion system GO:0009306 AM393_RS15195 4e9d03c043552091bdf2f52a7f5cb72b 657 Pfam PF03958 Bacterial type II/III secretion system short domain 266 343 3.9E-17 T 28-03-2018 IPR005644 NolW-like AM393_RS15195 4e9d03c043552091bdf2f52a7f5cb72b 657 Pfam PF03958 Bacterial type II/III secretion system short domain 126 187 3.5E-10 T 28-03-2018 IPR005644 NolW-like AM393_RS15195 4e9d03c043552091bdf2f52a7f5cb72b 657 Pfam PF03958 Bacterial type II/III secretion system short domain 191 261 3.1E-14 T 28-03-2018 IPR005644 NolW-like AM393_RS27395 89772a21a69168c6e3a8d46b7ab3a585 491 SMART SM00304 208 261 8.0E-7 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM393_RS27395 89772a21a69168c6e3a8d46b7ab3a585 491 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 372 480 1.7E-21 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS27395 89772a21a69168c6e3a8d46b7ab3a585 491 Pfam PF00512 His Kinase A (phospho-acceptor) domain 264 327 1.2E-10 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM393_RS27395 89772a21a69168c6e3a8d46b7ab3a585 491 Gene3D G3DSA:3.30.450.20 37 143 0.0033 T 28-03-2018 AM393_RS27395 89772a21a69168c6e3a8d46b7ab3a585 491 Gene3D G3DSA:3.30.565.10 332 489 4.0E-39 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS27395 89772a21a69168c6e3a8d46b7ab3a585 491 Gene3D G3DSA:1.10.287.130 252 324 5.3E-10 T 28-03-2018 AM393_RS27395 89772a21a69168c6e3a8d46b7ab3a585 491 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 423 6.8E-10 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM393_RS27395 89772a21a69168c6e3a8d46b7ab3a585 491 PRINTS PR00344 Bacterial sensor protein C-terminal signature 427 437 6.8E-10 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM393_RS27395 89772a21a69168c6e3a8d46b7ab3a585 491 PRINTS PR00344 Bacterial sensor protein C-terminal signature 444 462 6.8E-10 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM393_RS27395 89772a21a69168c6e3a8d46b7ab3a585 491 PRINTS PR00344 Bacterial sensor protein C-terminal signature 467 480 6.8E-10 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM393_RS27395 89772a21a69168c6e3a8d46b7ab3a585 491 TIGRFAM TIGR01386 cztS_silS_copS: heavy metal sensor kinase 9 480 2.3E-189 T 28-03-2018 IPR006290 Heavy metal sensor kinase GO:0000160|GO:0004673|GO:0016020 AM393_RS27395 89772a21a69168c6e3a8d46b7ab3a585 491 SUPERFAMILY SSF47384 245 329 5.69E-15 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM393_RS27395 89772a21a69168c6e3a8d46b7ab3a585 491 SMART SM00387 372 483 1.9E-37 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS27395 89772a21a69168c6e3a8d46b7ab3a585 491 SMART SM00388 262 328 1.7E-13 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM393_RS27395 89772a21a69168c6e3a8d46b7ab3a585 491 SUPERFAMILY SSF55874 317 481 3.01E-39 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS07935 a74817b5a73a7ae914fe272639a259d2 483 TIGRFAM TIGR02119 panF: sodium/pantothenate symporter 4 470 8.3E-228 T 28-03-2018 IPR011849 Sodium/pantothenate symporter GO:0015081|GO:0015233|GO:0015887|GO:0016021|GO:0031402|GO:0071436 AM393_RS07935 a74817b5a73a7ae914fe272639a259d2 483 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 414 434 - T 28-03-2018 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 AM393_RS07935 a74817b5a73a7ae914fe272639a259d2 483 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 155 180 - T 28-03-2018 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 AM393_RS07935 a74817b5a73a7ae914fe272639a259d2 483 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 36 432 6.8E-111 T 28-03-2018 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 AM393_RS07935 a74817b5a73a7ae914fe272639a259d2 483 Pfam PF00474 Sodium:solute symporter family 36 432 6.8E-136 T 28-03-2018 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 AM393_RS19260 335b3e71892e2ce39ee9d0fb0e6c124e 238 Gene3D G3DSA:1.10.10.10 1 69 5.5E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS19260 335b3e71892e2ce39ee9d0fb0e6c124e 238 SUPERFAMILY SSF64288 55 229 1.13E-38 T 28-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AM393_RS19260 335b3e71892e2ce39ee9d0fb0e6c124e 238 Pfam PF07702 UTRA domain 96 229 3.0E-29 T 28-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AM393_RS19260 335b3e71892e2ce39ee9d0fb0e6c124e 238 SMART SM00345 8 67 3.6E-14 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM393_RS19260 335b3e71892e2ce39ee9d0fb0e6c124e 238 SMART SM00866 92 231 4.3E-32 T 28-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AM393_RS19260 335b3e71892e2ce39ee9d0fb0e6c124e 238 Gene3D G3DSA:3.40.1410.10 88 231 1.2E-30 T 28-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AM393_RS19260 335b3e71892e2ce39ee9d0fb0e6c124e 238 Pfam PF00392 Bacterial regulatory proteins, gntR family 5 67 9.9E-17 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM393_RS19260 335b3e71892e2ce39ee9d0fb0e6c124e 238 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 41 57 1.5E-6 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM393_RS19260 335b3e71892e2ce39ee9d0fb0e6c124e 238 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 27 41 1.5E-6 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM393_RS19260 335b3e71892e2ce39ee9d0fb0e6c124e 238 SUPERFAMILY SSF46785 4 70 3.08E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS23205 e130a56a7c10ed2b41b36d69486b3807 300 Gene3D G3DSA:1.10.10.10 1 85 8.1E-25 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS23205 e130a56a7c10ed2b41b36d69486b3807 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 2.3E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS23205 e130a56a7c10ed2b41b36d69486b3807 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 2.3E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS23205 e130a56a7c10ed2b41b36d69486b3807 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 2.3E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS23205 e130a56a7c10ed2b41b36d69486b3807 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 4.7E-22 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS23205 e130a56a7c10ed2b41b36d69486b3807 300 SUPERFAMILY SSF53850 90 297 4.03E-40 T 28-03-2018 AM393_RS23205 e130a56a7c10ed2b41b36d69486b3807 300 Gene3D G3DSA:3.40.190.10 90 178 2.6E-21 T 28-03-2018 AM393_RS23205 e130a56a7c10ed2b41b36d69486b3807 300 Gene3D G3DSA:3.40.190.10 179 270 4.9E-27 T 28-03-2018 AM393_RS23205 e130a56a7c10ed2b41b36d69486b3807 300 SUPERFAMILY SSF46785 4 89 2.17E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS23205 e130a56a7c10ed2b41b36d69486b3807 300 Pfam PF03466 LysR substrate binding domain 89 295 2.8E-43 T 28-03-2018 IPR005119 LysR, substrate-binding AM393_RS12455 420de8602f22cbdda6994eacc67f1442 500 Gene3D G3DSA:1.20.1250.20 23 236 1.9E-22 T 28-03-2018 AM393_RS12455 420de8602f22cbdda6994eacc67f1442 500 Pfam PF08946 Osmosensory transporter coiled coil 454 499 8.6E-23 T 28-03-2018 IPR015041 Osmosensory transporter coiled coil AM393_RS12455 420de8602f22cbdda6994eacc67f1442 500 Pfam PF00083 Sugar (and other) transporter 28 448 2.0E-66 T 28-03-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 AM393_RS12455 420de8602f22cbdda6994eacc67f1442 500 SUPERFAMILY SSF103473 24 445 1.02E-67 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS12455 420de8602f22cbdda6994eacc67f1442 500 TIGRFAM TIGR00883 2A0106: MFS transporter, metabolite:H+ symporter (MHS) family protein 33 431 1.5E-142 T 28-03-2018 IPR004736 Citrate-proton symport GO:0005215|GO:0006810|GO:0016021 AM393_RS12455 420de8602f22cbdda6994eacc67f1442 500 Gene3D G3DSA:1.20.1250.20 240 488 5.7E-27 T 28-03-2018 AM393_RS12455 420de8602f22cbdda6994eacc67f1442 500 ProSitePatterns PS00216 Sugar transport proteins signature 1. 315 332 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM393_RS12455 420de8602f22cbdda6994eacc67f1442 500 SUPERFAMILY SSF103661 465 497 7.59E-13 T 28-03-2018 IPR015041 Osmosensory transporter coiled coil AM393_RS24635 8f497acf805f5da72dd87c2229f6cf1b 870 SUPERFAMILY SSF48208 435 838 8.16E-25 T 28-03-2018 IPR008928 Six-hairpin glycosidase-like GO:0003824 AM393_RS24635 8f497acf805f5da72dd87c2229f6cf1b 870 Gene3D G3DSA:1.50.10.10 434 763 9.5E-27 T 28-03-2018 AM393_RS24635 8f497acf805f5da72dd87c2229f6cf1b 870 Gene3D G3DSA:2.60.120.260 91 294 2.7E-27 T 28-03-2018 IPR008979 Galactose-binding domain-like AM393_RS24635 8f497acf805f5da72dd87c2229f6cf1b 870 Gene3D G3DSA:2.60.120.260 295 433 3.1E-17 T 28-03-2018 IPR008979 Galactose-binding domain-like AM393_RS24635 8f497acf805f5da72dd87c2229f6cf1b 870 Gene3D G3DSA:2.60.420.10 764 843 9.0E-14 T 28-03-2018 AM393_RS24635 8f497acf805f5da72dd87c2229f6cf1b 870 Pfam PF17389 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain 436 767 2.3E-42 T 28-03-2018 IPR035396 Alpha-L-rhamnosidase, six-hairpin glycosidase domain AM393_RS24635 8f497acf805f5da72dd87c2229f6cf1b 870 Pfam PF17390 Bacterial alpha-L-rhamnosidase C-terminal domain 782 837 8.4E-9 T 28-03-2018 IPR035398 Alpha-L-rhamnosidase C-terminal domain AM393_RS24635 8f497acf805f5da72dd87c2229f6cf1b 870 Pfam PF08531 Alpha-L-rhamnosidase N-terminal domain 133 297 1.5E-28 T 28-03-2018 IPR013737 Bacterial alpha-L-rhamnosidase N-terminal AM393_RS24635 8f497acf805f5da72dd87c2229f6cf1b 870 Pfam PF05592 Bacterial alpha-L-rhamnosidase concanavalin-like domain 312 430 6.7E-12 T 28-03-2018 IPR008902 Alpha-L-rhamnosidase, concanavalin-like domain AM393_RS10390 3edac06bbbbec9da05de5399fec8ec0b 548 PRINTS PR00701 60kDa inner membrane protein signature 324 344 2.3E-105 T 28-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AM393_RS10390 3edac06bbbbec9da05de5399fec8ec0b 548 PRINTS PR00701 60kDa inner membrane protein signature 415 438 2.3E-105 T 28-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AM393_RS10390 3edac06bbbbec9da05de5399fec8ec0b 548 PRINTS PR00701 60kDa inner membrane protein signature 157 177 2.3E-105 T 28-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AM393_RS10390 3edac06bbbbec9da05de5399fec8ec0b 548 PRINTS PR00701 60kDa inner membrane protein signature 65 86 2.3E-105 T 28-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AM393_RS10390 3edac06bbbbec9da05de5399fec8ec0b 548 PRINTS PR00701 60kDa inner membrane protein signature 2 23 2.3E-105 T 28-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AM393_RS10390 3edac06bbbbec9da05de5399fec8ec0b 548 PRINTS PR00701 60kDa inner membrane protein signature 217 235 2.3E-105 T 28-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AM393_RS10390 3edac06bbbbec9da05de5399fec8ec0b 548 PRINTS PR00701 60kDa inner membrane protein signature 462 484 2.3E-105 T 28-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AM393_RS10390 3edac06bbbbec9da05de5399fec8ec0b 548 PRINTS PR00701 60kDa inner membrane protein signature 499 522 2.3E-105 T 28-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AM393_RS10390 3edac06bbbbec9da05de5399fec8ec0b 548 PRINTS PR00701 60kDa inner membrane protein signature 251 266 2.3E-105 T 28-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AM393_RS10390 3edac06bbbbec9da05de5399fec8ec0b 548 PRINTS PR01900 YidC translocation/secretion protein signature 339 355 3.1E-29 T 28-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AM393_RS10390 3edac06bbbbec9da05de5399fec8ec0b 548 PRINTS PR01900 YidC translocation/secretion protein signature 468 483 3.1E-29 T 28-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AM393_RS10390 3edac06bbbbec9da05de5399fec8ec0b 548 PRINTS PR01900 YidC translocation/secretion protein signature 488 512 3.1E-29 T 28-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AM393_RS10390 3edac06bbbbec9da05de5399fec8ec0b 548 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 353 533 1.3E-68 T 28-03-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal AM393_RS10390 3edac06bbbbec9da05de5399fec8ec0b 548 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 3 352 8.8E-114 T 28-03-2018 IPR028053 Membrane insertase YidC, N-terminal AM393_RS10390 3edac06bbbbec9da05de5399fec8ec0b 548 Pfam PF02096 60Kd inner membrane protein 354 533 3.9E-60 T 28-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AM393_RS10390 3edac06bbbbec9da05de5399fec8ec0b 548 Pfam PF14849 YidC periplasmic domain 60 343 7.2E-87 T 28-03-2018 IPR028053 Membrane insertase YidC, N-terminal AM393_RS10390 3edac06bbbbec9da05de5399fec8ec0b 548 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 4 535 26.461 T 28-03-2018 IPR019998 Membrane insertase YidC GO:0016021|GO:0051205 AM393_RS23855 1b5ed91e52087bfbb088546a418c0255 442 SUPERFAMILY SSF56327 169 441 8.13E-84 T 28-03-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 AM393_RS23855 1b5ed91e52087bfbb088546a418c0255 442 SUPERFAMILY SSF51735 5 165 1.95E-51 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS23855 1b5ed91e52087bfbb088546a418c0255 442 ProSitePatterns PS01324 Glycosyl hydrolases family 4 signature. 139 170 - T 28-03-2018 IPR019802 Glycoside hydrolase, family 4, conserved site GO:0004553|GO:0005975 AM393_RS23855 1b5ed91e52087bfbb088546a418c0255 442 Gene3D G3DSA:3.90.1820.10 3 277 1.4E-60 T 28-03-2018 AM393_RS23855 1b5ed91e52087bfbb088546a418c0255 442 Gene3D G3DSA:3.90.1820.10 278 442 2.7E-43 T 28-03-2018 AM393_RS23855 1b5ed91e52087bfbb088546a418c0255 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 139 156 2.4E-53 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AM393_RS23855 1b5ed91e52087bfbb088546a418c0255 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 6 21 2.4E-53 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AM393_RS23855 1b5ed91e52087bfbb088546a418c0255 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 165 176 2.4E-53 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AM393_RS23855 1b5ed91e52087bfbb088546a418c0255 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 110 130 2.4E-53 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AM393_RS23855 1b5ed91e52087bfbb088546a418c0255 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 96 109 2.4E-53 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AM393_RS23855 1b5ed91e52087bfbb088546a418c0255 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 75 91 2.4E-53 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AM393_RS23855 1b5ed91e52087bfbb088546a418c0255 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 192 204 2.4E-53 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AM393_RS23855 1b5ed91e52087bfbb088546a418c0255 442 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 196 417 8.2E-51 T 28-03-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 AM393_RS23855 1b5ed91e52087bfbb088546a418c0255 442 Pfam PF02056 Family 4 glycosyl hydrolase 7 185 3.2E-59 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AM393_RS11310 377fcc6f54d0918d5210c013623ebf5c 355 Gene3D G3DSA:3.40.50.720 1 194 3.8E-40 T 28-03-2018 AM393_RS11310 377fcc6f54d0918d5210c013623ebf5c 355 SUPERFAMILY SSF51735 3 339 1.38E-93 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS11310 377fcc6f54d0918d5210c013623ebf5c 355 Gene3D G3DSA:3.90.25.10 195 351 3.7E-49 T 28-03-2018 AM393_RS11310 377fcc6f54d0918d5210c013623ebf5c 355 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 4 341 6.3E-161 T 28-03-2018 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|KEGG: 00525+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 AM393_RS11310 377fcc6f54d0918d5210c013623ebf5c 355 Pfam PF16363 GDP-mannose 4,6 dehydratase 5 327 1.4E-97 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS16330 b2fb78fcaab91b3df6443c1c0dd9f8b0 620 Gene3D G3DSA:3.40.50.970 297 485 6.3E-63 T 28-03-2018 AM393_RS16330 b2fb78fcaab91b3df6443c1c0dd9f8b0 620 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 10 620 46.219 T 28-03-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AM393_RS16330 b2fb78fcaab91b3df6443c1c0dd9f8b0 620 SUPERFAMILY SSF52922 492 619 1.44E-32 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AM393_RS16330 b2fb78fcaab91b3df6443c1c0dd9f8b0 620 SMART SM00861 319 484 1.0E-68 T 28-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AM393_RS16330 b2fb78fcaab91b3df6443c1c0dd9f8b0 620 ProSitePatterns PS00802 Transketolase signature 2. 425 441 - T 28-03-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AM393_RS16330 b2fb78fcaab91b3df6443c1c0dd9f8b0 620 Gene3D G3DSA:3.40.50.920 495 620 3.1E-35 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AM393_RS16330 b2fb78fcaab91b3df6443c1c0dd9f8b0 620 Gene3D G3DSA:3.40.50.970 3 296 6.5E-74 T 28-03-2018 AM393_RS16330 b2fb78fcaab91b3df6443c1c0dd9f8b0 620 Pfam PF02779 Transketolase, pyrimidine binding domain 320 480 1.9E-40 T 28-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AM393_RS16330 b2fb78fcaab91b3df6443c1c0dd9f8b0 620 ProSitePatterns PS00801 Transketolase signature 1. 36 55 - T 28-03-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AM393_RS16330 b2fb78fcaab91b3df6443c1c0dd9f8b0 620 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 11 620 0.0 T 28-03-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AM393_RS16330 b2fb78fcaab91b3df6443c1c0dd9f8b0 620 SUPERFAMILY SSF52518 10 199 2.78E-75 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold AM393_RS16330 b2fb78fcaab91b3df6443c1c0dd9f8b0 620 SUPERFAMILY SSF52518 243 381 2.78E-75 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold AM393_RS16330 b2fb78fcaab91b3df6443c1c0dd9f8b0 620 SUPERFAMILY SSF52518 317 504 1.37E-58 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold AM393_RS16330 b2fb78fcaab91b3df6443c1c0dd9f8b0 620 Pfam PF02780 Transketolase, C-terminal domain 495 611 1.5E-26 T 28-03-2018 IPR033248 Transketolase, C-terminal domain AM393_RS16330 b2fb78fcaab91b3df6443c1c0dd9f8b0 620 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 12 282 2.1E-115 T 28-03-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AM393_RS11835 0ee086779994a614954cb0e2ed7162df 529 SUPERFAMILY SSF53927 221 529 2.71E-131 T 28-03-2018 IPR016193 Cytidine deaminase-like GO:0003824 AM393_RS11835 0ee086779994a614954cb0e2ed7162df 529 Gene3D G3DSA:3.40.50.1380 1 196 1.1E-78 T 28-03-2018 IPR011607 Methylglyoxal synthase-like domain AM393_RS11835 0ee086779994a614954cb0e2ed7162df 529 SMART SM00851 19 132 1.5E-62 T 28-03-2018 IPR011607 Methylglyoxal synthase-like domain AM393_RS11835 0ee086779994a614954cb0e2ed7162df 529 PIRSF PIRSF000414 1 529 8.5E-229 T 28-03-2018 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AM393_RS11835 0ee086779994a614954cb0e2ed7162df 529 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 7 529 45.638 T 28-03-2018 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AM393_RS11835 0ee086779994a614954cb0e2ed7162df 529 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 8 529 3.5E-269 T 28-03-2018 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AM393_RS11835 0ee086779994a614954cb0e2ed7162df 529 SMART SM00798 137 461 2.1E-218 T 28-03-2018 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AM393_RS11835 0ee086779994a614954cb0e2ed7162df 529 Pfam PF01808 AICARFT/IMPCHase bienzyme 137 460 2.6E-120 T 28-03-2018 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AM393_RS11835 0ee086779994a614954cb0e2ed7162df 529 Gene3D G3DSA:3.40.140.20 226 374 6.7E-56 T 28-03-2018 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AM393_RS11835 0ee086779994a614954cb0e2ed7162df 529 Pfam PF02142 MGS-like domain 19 132 8.7E-30 T 28-03-2018 IPR011607 Methylglyoxal synthase-like domain AM393_RS11835 0ee086779994a614954cb0e2ed7162df 529 SUPERFAMILY SSF52335 7 197 3.01E-72 T 28-03-2018 IPR011607 Methylglyoxal synthase-like domain AM393_RS11835 0ee086779994a614954cb0e2ed7162df 529 Gene3D G3DSA:3.40.140.20 375 519 4.0E-53 T 28-03-2018 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AM393_RS12110 90cc3f8027baca8b745c6aa678cdd22f 359 Hamap MF_01201 Alanine racemase. 1 358 35.128 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM393_RS12110 90cc3f8027baca8b745c6aa678cdd22f 359 TIGRFAM TIGR00492 alr: alanine racemase 3 359 1.7E-146 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM393_RS12110 90cc3f8027baca8b745c6aa678cdd22f 359 Pfam PF01168 Alanine racemase, N-terminal domain 8 219 1.1E-72 T 28-03-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM393_RS12110 90cc3f8027baca8b745c6aa678cdd22f 359 SUPERFAMILY SSF51419 8 235 5.09E-70 T 28-03-2018 IPR029066 PLP-binding barrel AM393_RS12110 90cc3f8027baca8b745c6aa678cdd22f 359 Gene3D G3DSA:2.40.37.10 217 359 1.6E-52 T 28-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AM393_RS12110 90cc3f8027baca8b745c6aa678cdd22f 359 PRINTS PR00992 Alanine racemase signature 267 282 3.1E-76 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM393_RS12110 90cc3f8027baca8b745c6aa678cdd22f 359 PRINTS PR00992 Alanine racemase signature 288 305 3.1E-76 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM393_RS12110 90cc3f8027baca8b745c6aa678cdd22f 359 PRINTS PR00992 Alanine racemase signature 155 166 3.1E-76 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM393_RS12110 90cc3f8027baca8b745c6aa678cdd22f 359 PRINTS PR00992 Alanine racemase signature 192 219 3.1E-76 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM393_RS12110 90cc3f8027baca8b745c6aa678cdd22f 359 PRINTS PR00992 Alanine racemase signature 26 42 3.1E-76 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM393_RS12110 90cc3f8027baca8b745c6aa678cdd22f 359 PRINTS PR00992 Alanine racemase signature 340 353 3.1E-76 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM393_RS12110 90cc3f8027baca8b745c6aa678cdd22f 359 PRINTS PR00992 Alanine racemase signature 60 78 3.1E-76 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM393_RS12110 90cc3f8027baca8b745c6aa678cdd22f 359 PRINTS PR00992 Alanine racemase signature 120 132 3.1E-76 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM393_RS12110 90cc3f8027baca8b745c6aa678cdd22f 359 PRINTS PR00992 Alanine racemase signature 250 265 3.1E-76 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM393_RS12110 90cc3f8027baca8b745c6aa678cdd22f 359 Gene3D G3DSA:3.20.20.10 1 216 5.0E-47 T 28-03-2018 IPR029066 PLP-binding barrel AM393_RS12110 90cc3f8027baca8b745c6aa678cdd22f 359 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 31 41 - T 28-03-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM393_RS12110 90cc3f8027baca8b745c6aa678cdd22f 359 SUPERFAMILY SSF50621 228 358 4.88E-44 T 28-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AM393_RS12110 90cc3f8027baca8b745c6aa678cdd22f 359 Pfam PF00842 Alanine racemase, C-terminal domain 234 357 1.4E-39 T 28-03-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM393_RS12110 90cc3f8027baca8b745c6aa678cdd22f 359 SMART SM01005 234 358 2.4E-61 T 28-03-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM393_RS05415 d46fa9263464680e75428865fe1f7396 748 Gene3D G3DSA:1.10.274.10 195 307 8.0E-28 T 28-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 AM393_RS05415 d46fa9263464680e75428865fe1f7396 748 SUPERFAMILY SSF52009 293 412 9.68E-25 T 28-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AM393_RS05415 d46fa9263464680e75428865fe1f7396 748 SUPERFAMILY SSF55781 2 159 3.05E-30 T 28-03-2018 IPR029016 GAF domain-like AM393_RS05415 d46fa9263464680e75428865fe1f7396 748 Gene3D G3DSA:3.30.450.40 1 172 4.6E-30 T 28-03-2018 IPR029016 GAF domain-like AM393_RS05415 d46fa9263464680e75428865fe1f7396 748 Pfam PF00391 PEP-utilising enzyme, mobile domain 321 391 9.0E-16 T 28-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AM393_RS05415 d46fa9263464680e75428865fe1f7396 748 Pfam PF05524 PEP-utilising enzyme, N-terminal 174 294 5.5E-23 T 28-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 AM393_RS05415 d46fa9263464680e75428865fe1f7396 748 Gene3D G3DSA:3.20.20.60 421 739 1.0E-86 T 28-03-2018 AM393_RS05415 d46fa9263464680e75428865fe1f7396 748 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 351 362 - T 28-03-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 AM393_RS05415 d46fa9263464680e75428865fe1f7396 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 666 678 2.2E-24 T 28-03-2018 AM393_RS05415 d46fa9263464680e75428865fe1f7396 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 613 628 2.2E-24 T 28-03-2018 AM393_RS05415 d46fa9263464680e75428865fe1f7396 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 459 478 2.2E-24 T 28-03-2018 AM393_RS05415 d46fa9263464680e75428865fe1f7396 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 630 645 2.2E-24 T 28-03-2018 AM393_RS05415 d46fa9263464680e75428865fe1f7396 748 SMART SM00065 17 164 1.8E-28 T 28-03-2018 IPR003018 GAF domain GO:0005515 AM393_RS05415 d46fa9263464680e75428865fe1f7396 748 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 175 729 7.0E-125 T 28-03-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 AM393_RS05415 d46fa9263464680e75428865fe1f7396 748 Gene3D G3DSA:3.50.30.10 308 420 3.2E-19 T 28-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AM393_RS05415 d46fa9263464680e75428865fe1f7396 748 SUPERFAMILY SSF51621 425 714 3.66E-95 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AM393_RS05415 d46fa9263464680e75428865fe1f7396 748 SUPERFAMILY SSF47831 198 309 1.83E-25 T 28-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 AM393_RS05415 d46fa9263464680e75428865fe1f7396 748 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 425 707 6.9E-105 T 28-03-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 AM393_RS05415 d46fa9263464680e75428865fe1f7396 748 Pfam PF01590 GAF domain 18 152 1.8E-16 T 28-03-2018 IPR003018 GAF domain GO:0005515 AM393_RS05415 d46fa9263464680e75428865fe1f7396 748 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 613 631 - T 28-03-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 AM393_RS00965 ea5c957edb4130c049f644a618b220c8 477 ProSitePatterns PS00095 C-5 cytosine-specific DNA methylases C-terminal signature. 437 455 - T 28-03-2018 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site KEGG: 00270+2.1.1.37 AM393_RS00965 ea5c957edb4130c049f644a618b220c8 477 SUPERFAMILY SSF53335 92 456 1.87E-75 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM393_RS00965 ea5c957edb4130c049f644a618b220c8 477 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 94 455 6.5E-102 T 28-03-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 AM393_RS00965 ea5c957edb4130c049f644a618b220c8 477 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 93 109 2.4E-15 T 28-03-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 AM393_RS00965 ea5c957edb4130c049f644a618b220c8 477 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 276 289 2.4E-15 T 28-03-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 AM393_RS00965 ea5c957edb4130c049f644a618b220c8 477 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 222 236 2.4E-15 T 28-03-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 AM393_RS00965 ea5c957edb4130c049f644a618b220c8 477 Gene3D G3DSA:3.90.120.10 311 443 5.3E-23 T 28-03-2018 AM393_RS00965 ea5c957edb4130c049f644a618b220c8 477 ProSitePatterns PS00094 C-5 cytosine-specific DNA methylases active site. 174 186 - T 28-03-2018 IPR018117 DNA methylase, C-5 cytosine-specific, active site KEGG: 00270+2.1.1.37|Reactome: R-HSA-212300|Reactome: R-HSA-5334118 AM393_RS00965 ea5c957edb4130c049f644a618b220c8 477 Pfam PF00145 C-5 cytosine-specific DNA methylase 92 453 1.7E-74 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM393_RS00965 ea5c957edb4130c049f644a618b220c8 477 Gene3D G3DSA:3.40.50.150 84 310 2.6E-57 T 28-03-2018 AM393_RS00250 745f4dc32eba0e106d84d9f6836eee71 452 Pfam PF13347 MFS/sugar transport protein 14 434 1.6E-102 T 28-03-2018 AM393_RS00250 745f4dc32eba0e106d84d9f6836eee71 452 SUPERFAMILY SSF103473 13 416 3.53E-32 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS00250 745f4dc32eba0e106d84d9f6836eee71 452 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 12 446 1.8E-114 T 28-03-2018 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 AM393_RS00250 745f4dc32eba0e106d84d9f6836eee71 452 Gene3D G3DSA:1.20.1250.20 218 424 3.3E-14 T 28-03-2018 AM393_RS00250 745f4dc32eba0e106d84d9f6836eee71 452 Gene3D G3DSA:1.20.1250.20 13 217 3.3E-15 T 28-03-2018 AM393_RS09560 b96abaa036103b18d56fdef22b6152cf 157 TIGRFAM TIGR00185 tRNA_yibK_trmL: tRNA (cytidine(34)-2'-O)-methyltransferase 1 153 2.3E-72 T 28-03-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 AM393_RS09560 b96abaa036103b18d56fdef22b6152cf 157 PIRSF PIRSF029256 1 154 1.4E-69 T 28-03-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 AM393_RS09560 b96abaa036103b18d56fdef22b6152cf 157 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 151 34.192 T 28-03-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 AM393_RS09560 b96abaa036103b18d56fdef22b6152cf 157 Pfam PF00588 SpoU rRNA Methylase family 2 142 1.6E-33 T 28-03-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AM393_RS09560 b96abaa036103b18d56fdef22b6152cf 157 Gene3D G3DSA:3.40.1280.10 1 156 4.7E-37 T 28-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AM393_RS09560 b96abaa036103b18d56fdef22b6152cf 157 SUPERFAMILY SSF75217 1 152 4.45E-45 T 28-03-2018 IPR029028 Alpha/beta knot methyltransferases AM393_RS25190 33f4d38ede4d3fc96c1f6b274920e8f1 337 SMART SM00382 29 212 2.8E-16 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS25190 33f4d38ede4d3fc96c1f6b274920e8f1 337 Pfam PF08402 TOBE domain 257 330 2.9E-14 T 28-03-2018 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 AM393_RS25190 33f4d38ede4d3fc96c1f6b274920e8f1 337 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS25190 33f4d38ede4d3fc96c1f6b274920e8f1 337 Pfam PF00005 ABC transporter 21 162 4.6E-33 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS25190 33f4d38ede4d3fc96c1f6b274920e8f1 337 SUPERFAMILY SSF50331 245 330 1.23E-9 T 28-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal AM393_RS25190 33f4d38ede4d3fc96c1f6b274920e8f1 337 Gene3D G3DSA:3.40.50.300 1 262 2.3E-70 T 28-03-2018 AM393_RS25190 33f4d38ede4d3fc96c1f6b274920e8f1 337 SUPERFAMILY SSF52540 5 242 2.78E-83 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS25190 33f4d38ede4d3fc96c1f6b274920e8f1 337 Gene3D G3DSA:2.40.50.140 263 325 1.9E-7 T 28-03-2018 AM393_RS15560 7ed79e01a4fd54d0ab4a7675abdd32e6 243 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 7 242 9.0E-95 T 28-03-2018 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM393_RS15560 7ed79e01a4fd54d0ab4a7675abdd32e6 243 SMART SM00479 7 184 7.0E-50 T 28-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AM393_RS15560 7ed79e01a4fd54d0ab4a7675abdd32e6 243 Gene3D G3DSA:3.30.420.10 1 191 1.0E-38 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM393_RS15560 7ed79e01a4fd54d0ab4a7675abdd32e6 243 Pfam PF00929 Exonuclease 9 175 9.0E-39 T 28-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AM393_RS15560 7ed79e01a4fd54d0ab4a7675abdd32e6 243 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 6 225 1.2E-95 T 28-03-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM393_RS15560 7ed79e01a4fd54d0ab4a7675abdd32e6 243 SUPERFAMILY SSF53098 7 184 2.51E-51 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM393_RS11635 6d3a1c0d527d1e7fe88dcf8983573a81 342 Gene3D G3DSA:3.90.78.10 221 334 3.5E-41 T 28-03-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM393_RS11635 6d3a1c0d527d1e7fe88dcf8983573a81 342 Gene3D G3DSA:3.30.465.10 69 218 1.6E-48 T 28-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AM393_RS11635 6d3a1c0d527d1e7fe88dcf8983573a81 342 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 206 329 2.4E-33 T 28-03-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM393_RS11635 6d3a1c0d527d1e7fe88dcf8983573a81 342 SUPERFAMILY SSF56176 3 197 1.17E-43 T 28-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AM393_RS11635 6d3a1c0d527d1e7fe88dcf8983573a81 342 SUPERFAMILY SSF56194 202 339 1.44E-51 T 28-03-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM393_RS11635 6d3a1c0d527d1e7fe88dcf8983573a81 342 Gene3D G3DSA:3.30.43.10 3 68 2.1E-18 T 28-03-2018 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 AM393_RS11635 6d3a1c0d527d1e7fe88dcf8983573a81 342 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 5 330 3.5E-114 T 28-03-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM393_RS11635 6d3a1c0d527d1e7fe88dcf8983573a81 342 Pfam PF01565 FAD binding domain 19 148 4.4E-22 T 28-03-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 AM393_RS11635 6d3a1c0d527d1e7fe88dcf8983573a81 342 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 342 88.428 T 28-03-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM393_RS20625 372b0ef995d5c7c6deb73f289f71e353 408 Hamap MF_01528 Multidrug resistance protein MdtG [mdtG]. 1 404 48.719 T 28-03-2018 IPR023692 Multidrug resistance protein MdtG GO:0005215|GO:0005886 AM393_RS20625 372b0ef995d5c7c6deb73f289f71e353 408 Pfam PF07690 Major Facilitator Superfamily 18 259 3.8E-34 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS20625 372b0ef995d5c7c6deb73f289f71e353 408 SUPERFAMILY SSF103473 215 401 2.49E-28 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS20625 372b0ef995d5c7c6deb73f289f71e353 408 PRINTS PR01035 Tetracycline resistance protein signature 311 331 4.3E-11 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AM393_RS20625 372b0ef995d5c7c6deb73f289f71e353 408 PRINTS PR01035 Tetracycline resistance protein signature 346 369 4.3E-11 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AM393_RS20625 372b0ef995d5c7c6deb73f289f71e353 408 PRINTS PR01035 Tetracycline resistance protein signature 85 109 4.3E-11 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AM393_RS20625 372b0ef995d5c7c6deb73f289f71e353 408 PRINTS PR01035 Tetracycline resistance protein signature 142 164 4.3E-11 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AM393_RS20625 372b0ef995d5c7c6deb73f289f71e353 408 PRINTS PR01035 Tetracycline resistance protein signature 112 133 4.3E-11 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AM393_RS20625 372b0ef995d5c7c6deb73f289f71e353 408 PRINTS PR01035 Tetracycline resistance protein signature 23 39 4.3E-11 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AM393_RS20625 372b0ef995d5c7c6deb73f289f71e353 408 Gene3D G3DSA:1.20.1250.20 9 202 6.1E-37 T 28-03-2018 AM393_RS20625 372b0ef995d5c7c6deb73f289f71e353 408 Gene3D G3DSA:1.20.1250.20 205 406 1.1E-27 T 28-03-2018 AM393_RS20625 372b0ef995d5c7c6deb73f289f71e353 408 SUPERFAMILY SSF103473 9 201 1.83E-42 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS05040 6dc7eb674c1bf9aebac27ba2eef5a61e 251 SUPERFAMILY SSF88723 4 159 2.71E-37 T 28-03-2018 IPR029060 PIN domain-like AM393_RS05040 6dc7eb674c1bf9aebac27ba2eef5a61e 251 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 5 150 7.8E-29 T 28-03-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 AM393_RS05040 6dc7eb674c1bf9aebac27ba2eef5a61e 251 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 160 250 9.2E-26 T 28-03-2018 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 AM393_RS05040 6dc7eb674c1bf9aebac27ba2eef5a61e 251 Gene3D G3DSA:1.10.150.20 174 251 3.8E-24 T 28-03-2018 AM393_RS05040 6dc7eb674c1bf9aebac27ba2eef5a61e 251 SMART SM00475 3 250 6.2E-98 T 28-03-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 AM393_RS05040 6dc7eb674c1bf9aebac27ba2eef5a61e 251 Gene3D G3DSA:3.40.50.1010 3 173 1.3E-40 T 28-03-2018 IPR029060 PIN domain-like AM393_RS05040 6dc7eb674c1bf9aebac27ba2eef5a61e 251 Hamap MF_01192 Flap endonuclease Xni [xni]. 2 251 45.384 T 28-03-2018 IPR022895 Flap endonuclease Xni GO:0048256 AM393_RS05040 6dc7eb674c1bf9aebac27ba2eef5a61e 251 SUPERFAMILY SSF47807 160 243 5.98E-24 T 28-03-2018 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 AM393_RS05040 6dc7eb674c1bf9aebac27ba2eef5a61e 251 SMART SM00279 162 197 3.1E-12 T 28-03-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 AM393_RS05490 676f04c971bf3adb3e8b5de8f6da6ff6 336 Gene3D G3DSA:3.40.50.2300 55 175 8.5E-31 T 28-03-2018 AM393_RS05490 676f04c971bf3adb3e8b5de8f6da6ff6 336 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 8.2E-20 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM393_RS05490 676f04c971bf3adb3e8b5de8f6da6ff6 336 Gene3D G3DSA:1.10.260.40 2 54 2.8E-23 T 28-03-2018 AM393_RS05490 676f04c971bf3adb3e8b5de8f6da6ff6 336 Gene3D G3DSA:3.40.50.2300 176 312 2.5E-42 T 28-03-2018 AM393_RS05490 676f04c971bf3adb3e8b5de8f6da6ff6 336 SUPERFAMILY SSF47413 1 59 1.49E-18 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM393_RS05490 676f04c971bf3adb3e8b5de8f6da6ff6 336 SUPERFAMILY SSF53822 61 331 6.06E-76 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AM393_RS05490 676f04c971bf3adb3e8b5de8f6da6ff6 336 Pfam PF13377 Periplasmic binding protein-like domain 169 329 5.4E-31 T 28-03-2018 AM393_RS05490 676f04c971bf3adb3e8b5de8f6da6ff6 336 SMART SM00354 1 71 1.6E-32 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM393_RS10600 e4469759dbc16e0af58f8932fd892e98 309 Hamap MF_01987 Ribokinase [rbsK]. 5 304 25.767 T 28-03-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 AM393_RS10600 e4469759dbc16e0af58f8932fd892e98 309 Pfam PF00294 pfkB family carbohydrate kinase 6 297 9.3E-73 T 28-03-2018 IPR011611 Carbohydrate kinase PfkB AM393_RS10600 e4469759dbc16e0af58f8932fd892e98 309 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 249 262 - T 28-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AM393_RS10600 e4469759dbc16e0af58f8932fd892e98 309 Gene3D G3DSA:3.40.1190.20 1 309 8.4E-84 T 28-03-2018 IPR029056 Ribokinase-like AM393_RS10600 e4469759dbc16e0af58f8932fd892e98 309 TIGRFAM TIGR02152 D_ribokin_bact: ribokinase 8 302 1.5E-109 T 28-03-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 AM393_RS10600 e4469759dbc16e0af58f8932fd892e98 309 PRINTS PR00990 Ribokinase signature 36 55 2.7E-38 T 28-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AM393_RS10600 e4469759dbc16e0af58f8932fd892e98 309 PRINTS PR00990 Ribokinase signature 9 30 2.7E-38 T 28-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AM393_RS10600 e4469759dbc16e0af58f8932fd892e98 309 PRINTS PR00990 Ribokinase signature 220 231 2.7E-38 T 28-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AM393_RS10600 e4469759dbc16e0af58f8932fd892e98 309 PRINTS PR00990 Ribokinase signature 108 121 2.7E-38 T 28-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AM393_RS10600 e4469759dbc16e0af58f8932fd892e98 309 PRINTS PR00990 Ribokinase signature 176 191 2.7E-38 T 28-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AM393_RS10600 e4469759dbc16e0af58f8932fd892e98 309 SUPERFAMILY SSF53613 6 307 3.9E-82 T 28-03-2018 IPR029056 Ribokinase-like AM393_RS12125 4d0efbd7cfd1f7d829ab41e15568a382 138 SUPERFAMILY SSF111038 1 138 7.98E-47 T 28-03-2018 IPR001602 Uncharacterised protein family UPF0047 AM393_RS12125 4d0efbd7cfd1f7d829ab41e15568a382 138 Gene3D G3DSA:2.60.120.460 1 138 2.9E-57 T 28-03-2018 IPR001602 Uncharacterised protein family UPF0047 AM393_RS12125 4d0efbd7cfd1f7d829ab41e15568a382 138 TIGRFAM TIGR00149 TIGR00149_YjbQ: secondary thiamine-phosphate synthase enzyme 5 138 1.7E-46 T 28-03-2018 IPR001602 Uncharacterised protein family UPF0047 AM393_RS12125 4d0efbd7cfd1f7d829ab41e15568a382 138 ProSitePatterns PS01314 Uncharacterized protein family UPF0047 signature. 99 117 - T 28-03-2018 IPR001602 Uncharacterised protein family UPF0047 AM393_RS12125 4d0efbd7cfd1f7d829ab41e15568a382 138 Pfam PF01894 Uncharacterised protein family UPF0047 19 134 1.5E-35 T 28-03-2018 IPR001602 Uncharacterised protein family UPF0047 AM393_RS12125 4d0efbd7cfd1f7d829ab41e15568a382 138 PIRSF PIRSF004681 1 138 3.6E-43 T 28-03-2018 IPR001602 Uncharacterised protein family UPF0047 AM393_RS08175 130258815b53457cc880d577de936fd6 137 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 84 92 1.7E-14 T 28-03-2018 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 AM393_RS08175 130258815b53457cc880d577de936fd6 137 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 93 102 1.7E-14 T 28-03-2018 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 AM393_RS08175 130258815b53457cc880d577de936fd6 137 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 6 20 1.7E-14 T 28-03-2018 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 AM393_RS08175 130258815b53457cc880d577de936fd6 137 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 3 133 4.6E-59 T 28-03-2018 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 AM393_RS08175 130258815b53457cc880d577de936fd6 137 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 3 134 30.95 T 28-03-2018 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 AM393_RS08175 130258815b53457cc880d577de936fd6 137 ProSitePatterns PS01327 Large-conductance mechanosensitive channels mscL family signature. 13 26 - T 28-03-2018 IPR019823 Large-conductance mechanosensitive channel, conserved site AM393_RS08175 130258815b53457cc880d577de936fd6 137 SUPERFAMILY SSF81330 12 127 1.2E-36 T 28-03-2018 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 AM393_RS08175 130258815b53457cc880d577de936fd6 137 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 3 131 1.3E-46 T 28-03-2018 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 AM393_RS26875 ed4b7b7d77a1f493061ab5497d48fc29 194 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 3 182 36.351 T 28-03-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 AM393_RS26875 ed4b7b7d77a1f493061ab5497d48fc29 194 Gene3D G3DSA:3.40.50.1470 1 194 2.0E-69 T 28-03-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 AM393_RS26875 ed4b7b7d77a1f493061ab5497d48fc29 194 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 16 29 - T 28-03-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 AM393_RS26875 ed4b7b7d77a1f493061ab5497d48fc29 194 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 110 120 - T 28-03-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 AM393_RS26875 ed4b7b7d77a1f493061ab5497d48fc29 194 Pfam PF01195 Peptidyl-tRNA hydrolase 5 188 6.8E-54 T 28-03-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 AM393_RS26875 ed4b7b7d77a1f493061ab5497d48fc29 194 SUPERFAMILY SSF53178 3 192 5.1E-71 T 28-03-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 AM393_RS26875 ed4b7b7d77a1f493061ab5497d48fc29 194 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 3 189 2.0E-71 T 28-03-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 AM393_RS15100 c7658f9e5a24452a6ba1f16b51e2df37 263 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 1 263 1.4E-123 T 28-03-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 AM393_RS15100 c7658f9e5a24452a6ba1f16b51e2df37 263 SUPERFAMILY SSF51621 4 262 1.62E-103 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AM393_RS15100 c7658f9e5a24452a6ba1f16b51e2df37 263 Pfam PF02548 Ketopantoate hydroxymethyltransferase 4 257 3.1E-104 T 28-03-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 AM393_RS15100 c7658f9e5a24452a6ba1f16b51e2df37 263 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 4 262 41.961 T 28-03-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 AM393_RS15100 c7658f9e5a24452a6ba1f16b51e2df37 263 Gene3D G3DSA:3.20.20.60 1 262 1.1E-82 T 28-03-2018 AM393_RS15100 c7658f9e5a24452a6ba1f16b51e2df37 263 PIRSF PIRSF000388 1 263 8.8E-98 T 28-03-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 AM393_RS23910 2b6cc9f5ee5096e245d7f7a901915459 396 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 87 105 - T 28-03-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 AM393_RS23910 2b6cc9f5ee5096e245d7f7a901915459 396 ProSitePatterns PS00737 Thiolases signature 2. 340 356 - T 28-03-2018 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 AM393_RS23910 2b6cc9f5ee5096e245d7f7a901915459 396 Pfam PF00108 Thiolase, N-terminal domain 7 263 2.7E-80 T 28-03-2018 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 AM393_RS23910 2b6cc9f5ee5096e245d7f7a901915459 396 SUPERFAMILY SSF53901 272 393 3.99E-40 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM393_RS23910 2b6cc9f5ee5096e245d7f7a901915459 396 PIRSF PIRSF000429 1 395 5.1E-123 T 28-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 AM393_RS23910 2b6cc9f5ee5096e245d7f7a901915459 396 Pfam PF02803 Thiolase, C-terminal domain 272 393 5.8E-42 T 28-03-2018 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 AM393_RS23910 2b6cc9f5ee5096e245d7f7a901915459 396 SUPERFAMILY SSF53901 6 271 3.58E-78 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM393_RS23910 2b6cc9f5ee5096e245d7f7a901915459 396 ProSitePatterns PS00099 Thiolases active site. 375 388 - T 28-03-2018 IPR020610 Thiolase, active site GO:0008152|GO:0016747 AM393_RS23910 2b6cc9f5ee5096e245d7f7a901915459 396 Gene3D G3DSA:3.40.47.10 267 391 5.2E-30 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM393_RS23910 2b6cc9f5ee5096e245d7f7a901915459 396 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 9 392 3.0E-135 T 28-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 AM393_RS23910 2b6cc9f5ee5096e245d7f7a901915459 396 Gene3D G3DSA:3.40.47.10 1 266 2.9E-58 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM393_RS14910 1b929b7981b989fa5d788e9cc3d0ab32 206 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 2 192 27.271 T 28-03-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 AM393_RS14910 1b929b7981b989fa5d788e9cc3d0ab32 206 SUPERFAMILY SSF52540 1 192 2.42E-43 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS14910 1b929b7981b989fa5d788e9cc3d0ab32 206 Pfam PF01121 Dephospho-CoA kinase 4 177 1.8E-71 T 28-03-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 AM393_RS14910 1b929b7981b989fa5d788e9cc3d0ab32 206 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 5 190 7.8E-63 T 28-03-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 AM393_RS14910 1b929b7981b989fa5d788e9cc3d0ab32 206 Gene3D G3DSA:3.40.50.300 1 206 7.7E-46 T 28-03-2018 AM393_RS20750 8bb1a970869697087699e5a073c24b47 309 Gene3D G3DSA:3.40.366.10 1 183 1.6E-50 T 28-03-2018 AM393_RS20750 8bb1a970869697087699e5a073c24b47 309 Pfam PF00698 Acyl transferase domain 6 282 3.1E-39 T 28-03-2018 IPR014043 Acyl transferase AM393_RS20750 8bb1a970869697087699e5a073c24b47 309 Gene3D G3DSA:3.40.366.10 184 309 4.8E-31 T 28-03-2018 AM393_RS20750 8bb1a970869697087699e5a073c24b47 309 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 7 308 2.5E-39 T 28-03-2018 IPR020801 Polyketide synthase, acyl transferase domain AM393_RS20750 8bb1a970869697087699e5a073c24b47 309 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 3 291 3.7E-131 T 28-03-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 AM393_RS20750 8bb1a970869697087699e5a073c24b47 309 PIRSF PIRSF000446 1 309 1.4E-141 T 28-03-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 AM393_RS20750 8bb1a970869697087699e5a073c24b47 309 SUPERFAMILY SSF55048 128 197 6.54E-18 T 28-03-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 AM393_RS20750 8bb1a970869697087699e5a073c24b47 309 SUPERFAMILY SSF52151 190 307 1.05E-80 T 28-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 AM393_RS20750 8bb1a970869697087699e5a073c24b47 309 SUPERFAMILY SSF52151 4 122 1.05E-80 T 28-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 AM393_RS07490 562004b5d2d3152f8e0ae42d7bd932df 896 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 399 554 2.0E-33 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AM393_RS07490 562004b5d2d3152f8e0ae42d7bd932df 896 Pfam PF00009 Elongation factor Tu GTP binding domain 400 556 7.5E-35 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM393_RS07490 562004b5d2d3152f8e0ae42d7bd932df 896 SUPERFAMILY SSF52540 395 563 4.83E-53 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS07490 562004b5d2d3152f8e0ae42d7bd932df 896 Gene3D G3DSA:3.40.50.10050 698 774 4.9E-25 T 28-03-2018 IPR023115 Translation initiation factor IF- 2, domain 3 AM393_RS07490 562004b5d2d3152f8e0ae42d7bd932df 896 SUPERFAMILY SSF46955 3 50 8.24E-13 T 28-03-2018 IPR009061 Putative DNA-binding domain AM393_RS07490 562004b5d2d3152f8e0ae42d7bd932df 896 Gene3D G3DSA:2.40.30.10 568 697 3.2E-30 T 28-03-2018 AM393_RS07490 562004b5d2d3152f8e0ae42d7bd932df 896 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 1 51 5.8E-8 T 28-03-2018 IPR006847 Translation initiation factor IF-2, N-terminal AM393_RS07490 562004b5d2d3152f8e0ae42d7bd932df 896 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 320 370 7.3E-15 T 28-03-2018 IPR006847 Translation initiation factor IF-2, N-terminal AM393_RS07490 562004b5d2d3152f8e0ae42d7bd932df 896 SUPERFAMILY SSF50447 568 650 8.32E-23 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain AM393_RS07490 562004b5d2d3152f8e0ae42d7bd932df 896 Gene3D G3DSA:3.40.50.300 391 567 5.6E-39 T 28-03-2018 AM393_RS07490 562004b5d2d3152f8e0ae42d7bd932df 896 Pfam PF11987 Translation-initiation factor 2 680 785 4.0E-36 T 28-03-2018 IPR023115 Translation initiation factor IF- 2, domain 3 AM393_RS07490 562004b5d2d3152f8e0ae42d7bd932df 896 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 893 17.65 T 28-03-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 AM393_RS07490 562004b5d2d3152f8e0ae42d7bd932df 896 ProSitePatterns PS01176 Initiation factor 2 signature. 846 868 - T 28-03-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 AM393_RS07490 562004b5d2d3152f8e0ae42d7bd932df 896 Gene3D G3DSA:2.40.30.10 796 894 3.1E-31 T 28-03-2018 AM393_RS07490 562004b5d2d3152f8e0ae42d7bd932df 896 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 312 895 4.3E-298 T 28-03-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 AM393_RS07490 562004b5d2d3152f8e0ae42d7bd932df 896 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 57 95 5.2E-16 T 28-03-2018 IPR013575 Initiation factor 2 associated domain, bacterial AM393_RS07490 562004b5d2d3152f8e0ae42d7bd932df 896 Gene3D G3DSA:3.30.56.50 322 363 5.8E-10 T 28-03-2018 AM393_RS07490 562004b5d2d3152f8e0ae42d7bd932df 896 Gene3D G3DSA:3.30.56.50 4 45 4.9E-10 T 28-03-2018 AM393_RS07490 562004b5d2d3152f8e0ae42d7bd932df 896 SUPERFAMILY SSF50447 797 893 4.71E-34 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain AM393_RS07490 562004b5d2d3152f8e0ae42d7bd932df 896 SUPERFAMILY SSF52156 673 802 3.66E-37 T 28-03-2018 IPR023115 Translation initiation factor IF- 2, domain 3 AM393_RS00925 51db571794cce9a7ce20bb6730ff67f3 143 Pfam PF13987 YedD-like protein 25 129 3.7E-53 T 28-03-2018 IPR025596 YedD-like protein AM393_RS19065 940b1327407c046bc26a041fa56eaba3 170 PIRSF PIRSF006443 1 165 8.4E-62 T 28-03-2018 IPR012245 Molybdenum cofactor biosynthesis protein MoaB GO:0006777 AM393_RS19065 940b1327407c046bc26a041fa56eaba3 170 SMART SM00852 14 158 7.4E-31 T 28-03-2018 IPR001453 MoaB/Mog domain AM393_RS19065 940b1327407c046bc26a041fa56eaba3 170 SUPERFAMILY SSF53218 8 168 2.36E-46 T 28-03-2018 IPR001453 MoaB/Mog domain AM393_RS19065 940b1327407c046bc26a041fa56eaba3 170 Pfam PF00994 Probable molybdopterin binding domain 14 156 4.4E-33 T 28-03-2018 IPR001453 MoaB/Mog domain AM393_RS19065 940b1327407c046bc26a041fa56eaba3 170 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 12 153 1.3E-38 T 28-03-2018 IPR001453 MoaB/Mog domain AM393_RS19065 940b1327407c046bc26a041fa56eaba3 170 Gene3D G3DSA:3.40.980.10 3 170 7.6E-37 T 28-03-2018 IPR001453 MoaB/Mog domain AM393_RS19065 940b1327407c046bc26a041fa56eaba3 170 TIGRFAM TIGR02667 moaB_proteo: molybdenum cofactor biosynthesis protein B 7 169 4.5E-82 T 28-03-2018 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria GO:0006777 AM393_RS19065 940b1327407c046bc26a041fa56eaba3 170 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 72 85 - T 28-03-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 AM393_RS08635 269bc45ffd5326037b9151e1e89721db 776 Gene3D G3DSA:1.10.3500.10 360 498 2.2E-39 T 28-03-2018 IPR023323 Tex-like domain AM393_RS08635 269bc45ffd5326037b9151e1e89721db 776 SMART SM00316 649 720 5.6E-25 T 28-03-2018 IPR022967 RNA-binding domain, S1 AM393_RS08635 269bc45ffd5326037b9151e1e89721db 776 SUPERFAMILY SSF53098 323 469 1.01E-48 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM393_RS08635 269bc45ffd5326037b9151e1e89721db 776 Pfam PF12836 Helix-hairpin-helix motif 491 555 1.6E-28 T 28-03-2018 AM393_RS08635 269bc45ffd5326037b9151e1e89721db 776 Pfam PF16921 Tex protein YqgF-like domain 328 451 1.6E-50 T 28-03-2018 IPR032639 Tex protein, YqgF-like domain AM393_RS08635 269bc45ffd5326037b9151e1e89721db 776 Gene3D G3DSA:2.40.50.140 652 757 1.2E-24 T 28-03-2018 AM393_RS08635 269bc45ffd5326037b9151e1e89721db 776 SUPERFAMILY SSF47781 560 632 6.0E-20 T 28-03-2018 IPR010994 RuvA domain 2-like AM393_RS08635 269bc45ffd5326037b9151e1e89721db 776 Gene3D G3DSA:1.10.10.650 3 102 3.7E-34 T 28-03-2018 IPR023319 Tex-like protein, HTH domain AM393_RS08635 269bc45ffd5326037b9151e1e89721db 776 SUPERFAMILY SSF47781 470 558 5.0E-28 T 28-03-2018 IPR010994 RuvA domain 2-like AM393_RS08635 269bc45ffd5326037b9151e1e89721db 776 SMART SM00732 327 424 7.9E-36 T 28-03-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 AM393_RS08635 269bc45ffd5326037b9151e1e89721db 776 Pfam PF09371 Tex-like protein N-terminal domain 10 194 9.4E-71 T 28-03-2018 IPR018974 Tex-like protein, N-terminal AM393_RS08635 269bc45ffd5326037b9151e1e89721db 776 Pfam PF00575 S1 RNA binding domain 651 720 9.9E-22 T 28-03-2018 IPR003029 S1 domain GO:0003676 AM393_RS08635 269bc45ffd5326037b9151e1e89721db 776 SUPERFAMILY SSF50249 638 722 1.79E-24 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM393_RS08635 269bc45ffd5326037b9151e1e89721db 776 Gene3D G3DSA:1.10.150.310 499 630 3.0E-44 T 28-03-2018 AM393_RS08635 269bc45ffd5326037b9151e1e89721db 776 SUPERFAMILY SSF158832 2 322 3.4E-120 T 28-03-2018 AM393_RS08635 269bc45ffd5326037b9151e1e89721db 776 Gene3D G3DSA:1.10.3500.10 103 359 1.8E-77 T 28-03-2018 IPR023323 Tex-like domain AM393_RS18640 e34c6d5cb53b9c8838f0cf679d8af1f5 263 SMART SM00898 2 110 1.5E-12 T 28-03-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 AM393_RS18640 e34c6d5cb53b9c8838f0cf679d8af1f5 263 SUPERFAMILY SSF46946 126 214 5.1E-17 T 28-03-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 AM393_RS18640 e34c6d5cb53b9c8838f0cf679d8af1f5 263 SUPERFAMILY SSF57716 226 262 1.58E-10 T 28-03-2018 AM393_RS18640 e34c6d5cb53b9c8838f0cf679d8af1f5 263 Gene3D G3DSA:3.20.190.10 2 124 1.3E-22 T 28-03-2018 AM393_RS18640 e34c6d5cb53b9c8838f0cf679d8af1f5 263 SUPERFAMILY SSF81624 2 125 1.07E-24 T 28-03-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 AM393_RS18640 e34c6d5cb53b9c8838f0cf679d8af1f5 263 Pfam PF06827 Zinc finger found in FPG and IleRS 235 263 1.1E-7 T 28-03-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 AM393_RS18640 e34c6d5cb53b9c8838f0cf679d8af1f5 263 Hamap MF_01253 Endonuclease 8 [nei]. 1 263 59.44 T 28-03-2018 IPR023713 Endonuclease VIII GO:0003684|GO:0004519|GO:0006284|GO:0008270 AM393_RS18640 e34c6d5cb53b9c8838f0cf679d8af1f5 263 Gene3D G3DSA:1.10.8.50 125 263 5.7E-35 T 28-03-2018 AM393_RS18640 e34c6d5cb53b9c8838f0cf679d8af1f5 263 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 104 6.9E-10 T 28-03-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 AM393_RS18640 e34c6d5cb53b9c8838f0cf679d8af1f5 263 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 127 205 2.1E-11 T 28-03-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 AM393_RS18640 e34c6d5cb53b9c8838f0cf679d8af1f5 263 ProSitePatterns PS01242 Zinc finger FPG-type signature. 238 262 - T 28-03-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 AM393_RS18640 e34c6d5cb53b9c8838f0cf679d8af1f5 263 SMART SM01232 126 221 2.7E-16 T 28-03-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 AM393_RS07000 4c58b24867ec0db7420aab926dff6efb 607 SUPERFAMILY SSF53067 411 604 1.06E-31 T 28-03-2018 AM393_RS07000 4c58b24867ec0db7420aab926dff6efb 607 TIGRFAM TIGR04491 reactive_PduG: diol dehydratase reactivase alpha subunit 3 603 9.9E-295 T 28-03-2018 IPR009191 Diol dehydratase-reactivating factor alpha subunit AM393_RS07000 4c58b24867ec0db7420aab926dff6efb 607 Gene3D G3DSA:3.30.420.40 506 607 1.5E-18 T 28-03-2018 AM393_RS07000 4c58b24867ec0db7420aab926dff6efb 607 Gene3D G3DSA:3.30.420.40 313 410 0.0034 T 28-03-2018 AM393_RS07000 4c58b24867ec0db7420aab926dff6efb 607 Gene3D G3DSA:3.30.420.40 1 107 5.6E-11 T 28-03-2018 AM393_RS07000 4c58b24867ec0db7420aab926dff6efb 607 SUPERFAMILY SSF53067 250 405 5.76E-44 T 28-03-2018 AM393_RS07000 4c58b24867ec0db7420aab926dff6efb 607 PIRSF PIRSF011502 1 607 0.0 T 28-03-2018 IPR009191 Diol dehydratase-reactivating factor alpha subunit AM393_RS07000 4c58b24867ec0db7420aab926dff6efb 607 Pfam PF08841 Diol dehydratase reactivase ATPase-like domain 278 602 3.3E-155 T 28-03-2018 IPR030994 Diol dehydratase reactivase ATPase-like domain AM393_RS07000 4c58b24867ec0db7420aab926dff6efb 607 Gene3D G3DSA:2.40.50.140 468 505 8.1E-22 T 28-03-2018 AM393_RS07000 4c58b24867ec0db7420aab926dff6efb 607 SUPERFAMILY SSF82317 92 256 7.59E-68 T 28-03-2018 IPR028975 Diol dehydratase-reactivating factor, alpha subunit, swiveling domain AM393_RS07000 4c58b24867ec0db7420aab926dff6efb 607 Gene3D G3DSA:3.50.30.70 108 249 1.4E-62 T 28-03-2018 IPR028975 Diol dehydratase-reactivating factor, alpha subunit, swiveling domain AM393_RS22010 dcd74117dc264a872eaa40d229085f7f 236 Pfam PF09669 Phage regulatory protein Rha (Phage_pRha) 13 95 9.3E-16 T 28-03-2018 IPR014054 Bacteriophage regulatory protein, Rha family AM393_RS22010 dcd74117dc264a872eaa40d229085f7f 236 Gene3D G3DSA:1.10.10.10 3 86 5.2E-4 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS18305 204717844fdac3d1397c1c308b57724b 382 Gene3D G3DSA:2.40.40.10 56 169 2.3E-14 T 28-03-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain AM393_RS18305 204717844fdac3d1397c1c308b57724b 382 Pfam PF03330 Lytic transglycolase 78 166 6.6E-19 T 28-03-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain AM393_RS18305 204717844fdac3d1397c1c308b57724b 382 SUPERFAMILY SSF110997 307 379 3.4E-14 T 28-03-2018 IPR007730 Sporulation-related domain GO:0042834 AM393_RS18305 204717844fdac3d1397c1c308b57724b 382 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 11 169 20.61 T 28-03-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 AM393_RS18305 204717844fdac3d1397c1c308b57724b 382 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 81 180 1.7E-27 T 28-03-2018 IPR012997 Rare lipoprotein A AM393_RS18305 204717844fdac3d1397c1c308b57724b 382 Gene3D G3DSA:3.30.70.1070 309 382 5.7E-15 T 28-03-2018 IPR007730 Sporulation-related domain GO:0042834 AM393_RS18305 204717844fdac3d1397c1c308b57724b 382 Pfam PF05036 Sporulation related domain 307 379 4.7E-14 T 28-03-2018 IPR007730 Sporulation-related domain GO:0042834 AM393_RS18305 204717844fdac3d1397c1c308b57724b 382 SUPERFAMILY SSF50685 77 160 3.66E-5 T 28-03-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain AM393_RS28385 1977642bace41834d7db8c68db4c2a16 101 Pfam PF01845 CcdB protein 2 100 1.8E-27 T 28-03-2018 IPR002712 Toxin CcdB GO:0006276|GO:0008657 AM393_RS28385 1977642bace41834d7db8c68db4c2a16 101 SUPERFAMILY SSF50118 1 101 1.31E-27 T 28-03-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor AM393_RS28385 1977642bace41834d7db8c68db4c2a16 101 Gene3D G3DSA:2.30.30.110 2 100 9.2E-21 T 28-03-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor AM393_RS28385 1977642bace41834d7db8c68db4c2a16 101 ProDom PD012578 PLASMID TOXIN CCDB CYTOTOXIC LETB POST-SEGREGATION SYSTEM CCDB-LIKE GYRASE FUSED-CCDB 10 100 3.0E-29 T 28-03-2018 IPR002712 Toxin CcdB GO:0006276|GO:0008657 AM393_RS09480 ebbab5542d00516eec999f86b3851aaa 418 Gene3D G3DSA:3.40.640.10 69 298 8.6E-36 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM393_RS09480 ebbab5542d00516eec999f86b3851aaa 418 SUPERFAMILY SSF53383 17 408 4.4E-59 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM393_RS09480 ebbab5542d00516eec999f86b3851aaa 418 Gene3D G3DSA:3.90.1150.10 299 412 3.1E-16 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM393_RS09480 ebbab5542d00516eec999f86b3851aaa 418 Pfam PF00155 Aminotransferase class I and II 71 394 1.4E-20 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AM393_RS19120 47d54b8faab07a3d2fc0483dcffe4d9d 579 SUPERFAMILY SSF52540 4 228 2.37E-53 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS19120 47d54b8faab07a3d2fc0483dcffe4d9d 579 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS19120 47d54b8faab07a3d2fc0483dcffe4d9d 579 Gene3D G3DSA:3.40.50.300 2 282 2.1E-52 T 28-03-2018 AM393_RS19120 47d54b8faab07a3d2fc0483dcffe4d9d 579 Gene3D G3DSA:3.40.50.300 326 563 1.4E-60 T 28-03-2018 AM393_RS19120 47d54b8faab07a3d2fc0483dcffe4d9d 579 Pfam PF00005 ABC transporter 346 489 6.1E-28 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS19120 47d54b8faab07a3d2fc0483dcffe4d9d 579 Pfam PF00005 ABC transporter 26 165 3.0E-25 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS19120 47d54b8faab07a3d2fc0483dcffe4d9d 579 SMART SM00382 354 535 9.2E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS19120 47d54b8faab07a3d2fc0483dcffe4d9d 579 SMART SM00382 32 266 1.0E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS19120 47d54b8faab07a3d2fc0483dcffe4d9d 579 SUPERFAMILY SSF52540 325 548 1.96E-60 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS12920 6070a4fbc79a56ed08bad58321dcb095 91 Gene3D G3DSA:3.30.1660.10 20 91 6.6E-17 T 28-03-2018 IPR025543 Dodecin-like AM393_RS12920 6070a4fbc79a56ed08bad58321dcb095 91 Pfam PF07338 Protein of unknown function (DUF1471) 36 91 2.9E-16 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 AM393_RS12920 6070a4fbc79a56ed08bad58321dcb095 91 SUPERFAMILY SSF159871 1 91 1.83E-20 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 AM393_RS19395 670ca7a3818c91372fd08c5771f067e9 197 SUPERFAMILY SSF48317 3 195 3.79E-37 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AM393_RS19395 670ca7a3818c91372fd08c5771f067e9 197 Gene3D G3DSA:1.20.144.10 2 179 5.4E-25 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AM393_RS19395 670ca7a3818c91372fd08c5771f067e9 197 Pfam PF01569 PAP2 superfamily 56 168 7.5E-14 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AM393_RS19395 670ca7a3818c91372fd08c5771f067e9 197 SMART SM00014 57 164 3.5E-26 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AM393_RS27210 6223ec9ecb7e17e7fd30438bea069cea 187 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 113 125 7.3E-6 T 28-03-2018 AM393_RS27210 6223ec9ecb7e17e7fd30438bea069cea 187 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 54 68 7.3E-6 T 28-03-2018 AM393_RS27210 6223ec9ecb7e17e7fd30438bea069cea 187 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 30 46 7.3E-6 T 28-03-2018 AM393_RS27210 6223ec9ecb7e17e7fd30438bea069cea 187 Pfam PF05175 Methyltransferase small domain 42 148 1.4E-8 T 28-03-2018 IPR007848 Methyltransferase small domain GO:0008168 AM393_RS27210 6223ec9ecb7e17e7fd30438bea069cea 187 SUPERFAMILY SSF53335 32 184 1.21E-26 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM393_RS27210 6223ec9ecb7e17e7fd30438bea069cea 187 Gene3D G3DSA:3.40.50.150 10 181 3.0E-22 T 28-03-2018 AM393_RS27210 6223ec9ecb7e17e7fd30438bea069cea 187 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 116 122 - T 28-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AM393_RS12650 fa1210f3efb3be007c8a1841bffbcfbc 228 Gene3D G3DSA:2.60.40.10 143 228 2.9E-20 T 28-03-2018 IPR013783 Immunoglobulin-like fold AM393_RS12650 fa1210f3efb3be007c8a1841bffbcfbc 228 Gene3D G3DSA:2.60.40.10 24 138 5.2E-31 T 28-03-2018 IPR013783 Immunoglobulin-like fold AM393_RS12650 fa1210f3efb3be007c8a1841bffbcfbc 228 SUPERFAMILY SSF49584 135 222 2.09E-18 T 28-03-2018 IPR016148 Pili assembly chaperone, C-terminal AM393_RS12650 fa1210f3efb3be007c8a1841bffbcfbc 228 PRINTS PR00969 Pili chaperone signature 96 113 1.8E-30 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM393_RS12650 fa1210f3efb3be007c8a1841bffbcfbc 228 PRINTS PR00969 Pili chaperone signature 67 88 1.8E-30 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM393_RS12650 fa1210f3efb3be007c8a1841bffbcfbc 228 PRINTS PR00969 Pili chaperone signature 158 173 1.8E-30 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM393_RS12650 fa1210f3efb3be007c8a1841bffbcfbc 228 PRINTS PR00969 Pili chaperone signature 24 33 1.8E-30 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM393_RS12650 fa1210f3efb3be007c8a1841bffbcfbc 228 PRINTS PR00969 Pili chaperone signature 122 137 1.8E-30 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM393_RS12650 fa1210f3efb3be007c8a1841bffbcfbc 228 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 23 140 2.0E-37 T 28-03-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 AM393_RS12650 fa1210f3efb3be007c8a1841bffbcfbc 228 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 163 220 5.8E-13 T 28-03-2018 IPR016148 Pili assembly chaperone, C-terminal AM393_RS12650 fa1210f3efb3be007c8a1841bffbcfbc 228 SUPERFAMILY SSF49354 18 140 1.96E-36 T 28-03-2018 IPR008962 PapD-like AM393_RS10310 115117f3c8f659b172cb66d71e03863b 445 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 37 420 3.5E-126 T 28-03-2018 AM393_RS10310 115117f3c8f659b172cb66d71e03863b 445 PIRSF PIRSF002808 7 444 2.7E-34 T 28-03-2018 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 AM393_RS10310 115117f3c8f659b172cb66d71e03863b 445 Gene3D G3DSA:1.20.1250.20 235 444 7.7E-27 T 28-03-2018 AM393_RS10310 115117f3c8f659b172cb66d71e03863b 445 Pfam PF07690 Major Facilitator Superfamily 36 404 1.0E-59 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS10310 115117f3c8f659b172cb66d71e03863b 445 SUPERFAMILY SSF103473 23 441 4.58E-85 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS10310 115117f3c8f659b172cb66d71e03863b 445 Gene3D G3DSA:1.20.1250.20 21 222 2.5E-38 T 28-03-2018 AM393_RS10310 115117f3c8f659b172cb66d71e03863b 445 TIGRFAM TIGR00893 2A0114: D-galactonate transporter 38 438 2.2E-145 T 28-03-2018 IPR004744 D-galactonate transporter GO:0005215|GO:0006810|GO:0016021 AM393_RS08685 6007be66cc35dd0905d921f70e98215a 796 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 638 650 - T 28-03-2018 IPR035090 Phosphorylase pyridoxal-phosphate attachment site KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 AM393_RS08685 6007be66cc35dd0905d921f70e98215a 796 SUPERFAMILY SSF53756 5 794 9.42E-296 T 28-03-2018 AM393_RS08685 6007be66cc35dd0905d921f70e98215a 796 Gene3D G3DSA:3.40.50.2000 465 779 2.0E-135 T 28-03-2018 AM393_RS08685 6007be66cc35dd0905d921f70e98215a 796 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 8 793 0.0 T 28-03-2018 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 AM393_RS08685 6007be66cc35dd0905d921f70e98215a 796 Gene3D G3DSA:3.40.50.2000 1 464 8.3E-172 T 28-03-2018 AM393_RS08685 6007be66cc35dd0905d921f70e98215a 796 Pfam PF00343 Carbohydrate phosphorylase 93 793 0.0 T 28-03-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 AM393_RS08685 6007be66cc35dd0905d921f70e98215a 796 PIRSF PIRSF000460 1 796 1.3E-208 T 28-03-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 AM393_RS21215 a4ebfc8ae13de30e247e8bed8d37b7b7 293 Gene3D G3DSA:3.40.190.10 92 291 5.1E-20 T 28-03-2018 AM393_RS21215 a4ebfc8ae13de30e247e8bed8d37b7b7 293 SUPERFAMILY SSF53850 92 287 5.79E-27 T 28-03-2018 AM393_RS21215 a4ebfc8ae13de30e247e8bed8d37b7b7 293 Gene3D G3DSA:1.10.10.10 2 89 3.4E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS21215 a4ebfc8ae13de30e247e8bed8d37b7b7 293 SUPERFAMILY SSF46785 5 113 1.47E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS21215 a4ebfc8ae13de30e247e8bed8d37b7b7 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 1.2E-16 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS21215 a4ebfc8ae13de30e247e8bed8d37b7b7 293 Pfam PF03466 LysR substrate binding domain 90 282 1.2E-22 T 28-03-2018 IPR005119 LysR, substrate-binding AM393_RS09935 1bac37da37843155d63613ce72f7027e 232 Pfam PF15977 Winged helix-turn-helix DNA binding 162 229 3.8E-29 T 28-03-2018 AM393_RS09935 1bac37da37843155d63613ce72f7027e 232 Gene3D G3DSA:1.10.10.10 121 226 3.0E-4 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS01120 f97c1261d7d9d7b29376dcef44de7c52 309 SUPERFAMILY SSF55620 23 176 3.22E-21 T 28-03-2018 AM393_RS01120 f97c1261d7d9d7b29376dcef44de7c52 309 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 47 94 1.5E-4 T 28-03-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein Reactome: R-HSA-1474151 AM393_RS01120 f97c1261d7d9d7b29376dcef44de7c52 309 Gene3D G3DSA:3.30.479.10 31 168 5.5E-18 T 28-03-2018 AM393_RS01120 f97c1261d7d9d7b29376dcef44de7c52 309 Gene3D G3DSA:3.30.479.10 169 309 4.6E-24 T 28-03-2018 AM393_RS01120 f97c1261d7d9d7b29376dcef44de7c52 309 SUPERFAMILY SSF55620 172 308 2.17E-22 T 28-03-2018 AM393_RS23705 f989545c08e7f87a9b5e3ecd2d8eb852 342 Pfam PF03171 2OG-Fe(II) oxygenase superfamily 176 273 3.2E-19 T 28-03-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 AM393_RS23705 f989545c08e7f87a9b5e3ecd2d8eb852 342 Gene3D G3DSA:2.60.120.330 3 338 6.7E-89 T 28-03-2018 IPR027443 Isopenicillin N synthase-like AM393_RS23705 f989545c08e7f87a9b5e3ecd2d8eb852 342 PRINTS PR00682 Isopenicillin N synthase signature 234 260 1.4E-12 T 28-03-2018 AM393_RS23705 f989545c08e7f87a9b5e3ecd2d8eb852 342 PRINTS PR00682 Isopenicillin N synthase signature 27 44 1.4E-12 T 28-03-2018 AM393_RS23705 f989545c08e7f87a9b5e3ecd2d8eb852 342 PRINTS PR00682 Isopenicillin N synthase signature 198 219 1.4E-12 T 28-03-2018 AM393_RS23705 f989545c08e7f87a9b5e3ecd2d8eb852 342 Pfam PF14226 non-haem dioxygenase in morphine synthesis N-terminal 6 128 1.4E-37 T 28-03-2018 IPR026992 Non-haem dioxygenase N-terminal domain AM393_RS23705 f989545c08e7f87a9b5e3ecd2d8eb852 342 SUPERFAMILY SSF51197 2 283 6.52E-82 T 28-03-2018 AM393_RS12795 8ab3cd8230790aaeb0f11c33f79e304f 619 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 1 311 4.6E-105 T 28-03-2018 IPR002099 DNA mismatch repair protein family GO:0005524|GO:0006298|GO:0030983 AM393_RS12795 8ab3cd8230790aaeb0f11c33f79e304f 619 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 1 616 25.567 T 28-03-2018 IPR020667 DNA mismatch repair protein, MutL GO:0006298 AM393_RS12795 8ab3cd8230790aaeb0f11c33f79e304f 619 SUPERFAMILY SSF54211 191 331 4.17E-34 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM393_RS12795 8ab3cd8230790aaeb0f11c33f79e304f 619 Pfam PF08676 MutL C terminal dimerisation domain 439 568 6.4E-26 T 28-03-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 AM393_RS12795 8ab3cd8230790aaeb0f11c33f79e304f 619 SUPERFAMILY SSF118116 438 617 2.22E-43 T 28-03-2018 AM393_RS12795 8ab3cd8230790aaeb0f11c33f79e304f 619 SMART SM01340 212 331 3.6E-53 T 28-03-2018 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 AM393_RS12795 8ab3cd8230790aaeb0f11c33f79e304f 619 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 214 330 1.5E-34 T 28-03-2018 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 AM393_RS12795 8ab3cd8230790aaeb0f11c33f79e304f 619 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 24 122 3.6E-13 T 28-03-2018 AM393_RS12795 8ab3cd8230790aaeb0f11c33f79e304f 619 SUPERFAMILY SSF55874 1 200 1.3E-56 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS12795 8ab3cd8230790aaeb0f11c33f79e304f 619 Gene3D G3DSA:3.30.230.10 217 330 3.0E-28 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AM393_RS12795 8ab3cd8230790aaeb0f11c33f79e304f 619 Gene3D G3DSA:3.30.565.10 1 216 2.3E-34 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS12795 8ab3cd8230790aaeb0f11c33f79e304f 619 SMART SM00853 442 577 1.4E-17 T 28-03-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 AM393_RS12795 8ab3cd8230790aaeb0f11c33f79e304f 619 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 93 99 - T 28-03-2018 IPR014762 DNA mismatch repair, conserved site AM393_RS03970 d0528fad008327cbe2719d52cc0b222a 152 Pfam PF11162 Protein of unknown function (DUF2946) 16 145 1.3E-17 T 28-03-2018 IPR021333 Protein of unknown function DUF2946 AM393_RS25130 b93dc7011b33bf48ffab3a7a1192f448 77 Pfam PF10735 Protein of unknown function (DUF2526) 1 77 7.9E-44 T 28-03-2018 IPR019671 Protein of unknown function DUF2526 AM393_RS21880 4cd2910a3d66d5ab545914de159b1b1d 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 1.9E-18 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS21880 4cd2910a3d66d5ab545914de159b1b1d 293 SUPERFAMILY SSF53850 84 293 1.34E-38 T 28-03-2018 AM393_RS21880 4cd2910a3d66d5ab545914de159b1b1d 293 Pfam PF03466 LysR substrate binding domain 84 293 7.9E-36 T 28-03-2018 IPR005119 LysR, substrate-binding AM393_RS21880 4cd2910a3d66d5ab545914de159b1b1d 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 17 28 3.1E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS21880 4cd2910a3d66d5ab545914de159b1b1d 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 28 38 3.1E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS21880 4cd2910a3d66d5ab545914de159b1b1d 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 38 49 3.1E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS21880 4cd2910a3d66d5ab545914de159b1b1d 293 Gene3D G3DSA:1.10.10.10 2 83 8.2E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS21880 4cd2910a3d66d5ab545914de159b1b1d 293 Gene3D G3DSA:3.40.190.10 84 172 2.8E-18 T 28-03-2018 AM393_RS21880 4cd2910a3d66d5ab545914de159b1b1d 293 SUPERFAMILY SSF46785 4 108 7.27E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS21880 4cd2910a3d66d5ab545914de159b1b1d 293 Gene3D G3DSA:3.40.190.10 173 261 3.5E-16 T 28-03-2018 AM393_RS23660 752dc1edcc99f948d9956234b22211cd 395 SUPERFAMILY SSF103473 14 390 1.11E-45 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS23660 752dc1edcc99f948d9956234b22211cd 395 Gene3D G3DSA:1.20.1250.20 4 199 3.2E-17 T 28-03-2018 AM393_RS23660 752dc1edcc99f948d9956234b22211cd 395 Gene3D G3DSA:1.20.1250.20 210 395 5.7E-18 T 28-03-2018 AM393_RS23660 752dc1edcc99f948d9956234b22211cd 395 Pfam PF07690 Major Facilitator Superfamily 19 240 3.5E-14 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS24760 eb403d9d34a2890c55592a67babbc915 46 Pfam PF08136 30S ribosomal protein subunit S22 family 1 44 7.1E-33 T 28-03-2018 IPR012607 Ribosomal protein S22 GO:0003735|GO:0005840|GO:0006412 AM393_RS24760 eb403d9d34a2890c55592a67babbc915 46 ProDom PD049510 RIBOSOMAL S22 30S RIBONUCLEOPROTEIN SUBUNIT D RIBOSOME- SEQUENCING DIRECT ASSOCIATED 1 45 6.0E-9 T 28-03-2018 IPR012607 Ribosomal protein S22 GO:0003735|GO:0005840|GO:0006412 AM393_RS13560 69ef4e0682665d73a0073ba2773468fc 559 SUPERFAMILY SSF75005 4 320 3.71E-93 T 28-03-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain AM393_RS13560 69ef4e0682665d73a0073ba2773468fc 559 Gene3D G3DSA:2.60.120.200 331 540 1.3E-37 T 28-03-2018 AM393_RS13560 69ef4e0682665d73a0073ba2773468fc 559 Pfam PF04616 Glycosyl hydrolases family 43 4 305 5.2E-93 T 28-03-2018 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 AM393_RS13560 69ef4e0682665d73a0073ba2773468fc 559 SUPERFAMILY SSF49899 333 538 4.35E-56 T 28-03-2018 IPR013320 Concanavalin A-like lectin/glucanase domain AM393_RS13560 69ef4e0682665d73a0073ba2773468fc 559 Gene3D G3DSA:2.115.10.20 2 322 1.6E-68 T 28-03-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain AM393_RS21425 6d32622c9cf7d060926af85ff0617c2b 268 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 4 259 3.5E-21 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase AM393_RS21425 6d32622c9cf7d060926af85ff0617c2b 268 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 27 36 - T 28-03-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 AM393_RS21425 6d32622c9cf7d060926af85ff0617c2b 268 Gene3D G3DSA:3.60.10.10 1 267 3.9E-52 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase AM393_RS21425 6d32622c9cf7d060926af85ff0617c2b 268 ProSitePatterns PS00728 AP endonucleases family 1 signature 3. 223 234 - T 28-03-2018 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 Reactome: R-HSA-110357|Reactome: R-HSA-110362|Reactome: R-HSA-110373|Reactome: R-HSA-5651801|Reactome: R-HSA-73930|Reactome: R-HSA-73933 AM393_RS21425 6d32622c9cf7d060926af85ff0617c2b 268 SUPERFAMILY SSF56219 1 267 5.1E-88 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase AM393_RS21425 6d32622c9cf7d060926af85ff0617c2b 268 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 266 1.5E-109 T 28-03-2018 AM393_RS21425 6d32622c9cf7d060926af85ff0617c2b 268 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 266 1.1E-93 T 28-03-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 AM393_RS21545 ce170f7b79a7b819edf55d958ed37e48 727 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 710 727 - T 28-03-2018 IPR010917 TonB-dependent receptor, conserved site AM393_RS21545 ce170f7b79a7b819edf55d958ed37e48 727 SUPERFAMILY SSF56935 32 727 1.24E-130 T 28-03-2018 AM393_RS21545 ce170f7b79a7b819edf55d958ed37e48 727 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 52 727 3.5E-78 T 28-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AM393_RS21545 ce170f7b79a7b819edf55d958ed37e48 727 Pfam PF07715 TonB-dependent Receptor Plug Domain 51 165 3.4E-29 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM393_RS21545 ce170f7b79a7b819edf55d958ed37e48 727 Gene3D G3DSA:2.170.130.10 42 178 2.1E-36 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM393_RS21545 ce170f7b79a7b819edf55d958ed37e48 727 Pfam PF00593 TonB dependent receptor 256 725 1.2E-54 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM393_RS21545 ce170f7b79a7b819edf55d958ed37e48 727 Gene3D G3DSA:2.40.170.20 179 727 3.0E-78 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM393_RS24955 8cc74473855ffbebe8c7cd671d5a5a6f 551 Gene3D G3DSA:1.10.3720.10 286 551 3.1E-31 T 28-03-2018 AM393_RS24955 8cc74473855ffbebe8c7cd671d5a5a6f 551 Gene3D G3DSA:1.10.3720.10 4 271 2.8E-31 T 28-03-2018 AM393_RS24955 8cc74473855ffbebe8c7cd671d5a5a6f 551 SUPERFAMILY SSF161098 5 265 1.68E-39 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS24955 8cc74473855ffbebe8c7cd671d5a5a6f 551 SUPERFAMILY SSF161098 288 547 1.74E-44 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS24955 8cc74473855ffbebe8c7cd671d5a5a6f 551 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 77 265 4.1E-13 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS24955 8cc74473855ffbebe8c7cd671d5a5a6f 551 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 366 550 1.8E-13 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS16105 e12ea772f00ca6131c244aa041f9ea1f 471 PRINTS PR00113 Alkaline phosphatase signature 121 136 4.0E-49 T 28-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AM393_RS16105 e12ea772f00ca6131c244aa041f9ea1f 471 PRINTS PR00113 Alkaline phosphatase signature 320 349 4.0E-49 T 28-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AM393_RS16105 e12ea772f00ca6131c244aa041f9ea1f 471 PRINTS PR00113 Alkaline phosphatase signature 64 84 4.0E-49 T 28-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AM393_RS16105 e12ea772f00ca6131c244aa041f9ea1f 471 PRINTS PR00113 Alkaline phosphatase signature 221 231 4.0E-49 T 28-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AM393_RS16105 e12ea772f00ca6131c244aa041f9ea1f 471 PRINTS PR00113 Alkaline phosphatase signature 158 178 4.0E-49 T 28-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AM393_RS16105 e12ea772f00ca6131c244aa041f9ea1f 471 SMART SM00098 65 471 1.0E-224 T 28-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AM393_RS16105 e12ea772f00ca6131c244aa041f9ea1f 471 Pfam PF00245 Alkaline phosphatase 64 431 3.9E-131 T 28-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AM393_RS16105 e12ea772f00ca6131c244aa041f9ea1f 471 SUPERFAMILY SSF53649 37 470 9.6E-140 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AM393_RS16105 e12ea772f00ca6131c244aa041f9ea1f 471 Gene3D G3DSA:3.40.720.10 24 471 8.7E-130 T 28-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AM393_RS16105 e12ea772f00ca6131c244aa041f9ea1f 471 ProSitePatterns PS00123 Alkaline phosphatase active site. 121 129 - T 28-03-2018 IPR018299 Alkaline phosphatase, active site GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AM393_RS04475 0e27435cf1f409e37e5bd0380d20a915 321 Gene3D G3DSA:3.40.50.10490 3 194 9.5E-48 T 28-03-2018 AM393_RS04475 0e27435cf1f409e37e5bd0380d20a915 321 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 43 311 9.4E-126 T 28-03-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 AM393_RS04475 0e27435cf1f409e37e5bd0380d20a915 321 Gene3D G3DSA:3.10.580.10 195 318 3.1E-21 T 28-03-2018 AM393_RS04475 0e27435cf1f409e37e5bd0380d20a915 321 Pfam PF01380 SIS domain 39 169 1.4E-31 T 28-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AM393_RS04475 0e27435cf1f409e37e5bd0380d20a915 321 SUPERFAMILY SSF53697 6 255 2.18E-54 T 28-03-2018 AM393_RS04475 0e27435cf1f409e37e5bd0380d20a915 321 Pfam PF00571 CBS domain 199 256 8.5E-6 T 28-03-2018 IPR000644 CBS domain AM393_RS04475 0e27435cf1f409e37e5bd0380d20a915 321 Pfam PF00571 CBS domain 266 312 1.2E-6 T 28-03-2018 IPR000644 CBS domain AM393_RS04475 0e27435cf1f409e37e5bd0380d20a915 321 SMART SM00116 208 256 2.3 T 28-03-2018 IPR000644 CBS domain AM393_RS04475 0e27435cf1f409e37e5bd0380d20a915 321 SMART SM00116 272 320 0.074 T 28-03-2018 IPR000644 CBS domain AM393_RS04475 0e27435cf1f409e37e5bd0380d20a915 321 PIRSF PIRSF004692 1 321 7.3E-121 T 28-03-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 AM393_RS04475 0e27435cf1f409e37e5bd0380d20a915 321 SUPERFAMILY SSF54631 264 316 2.58E-9 T 28-03-2018 AM393_RS07025 8a774c42ea975a5829722a48ca194594 387 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 264 284 - T 28-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 AM393_RS07025 8a774c42ea975a5829722a48ca194594 387 Gene3D G3DSA:3.40.50.1970 11 186 3.7E-43 T 28-03-2018 AM393_RS07025 8a774c42ea975a5829722a48ca194594 387 SUPERFAMILY SSF56796 4 386 4.84E-134 T 28-03-2018 AM393_RS07025 8a774c42ea975a5829722a48ca194594 387 Pfam PF00465 Iron-containing alcohol dehydrogenase 11 379 1.0E-128 T 28-03-2018 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 AM393_RS07025 8a774c42ea975a5829722a48ca194594 387 Gene3D G3DSA:1.20.1090.10 188 387 6.8E-70 T 28-03-2018 AM393_RS07025 8a774c42ea975a5829722a48ca194594 387 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 177 205 - T 28-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 AM393_RS21005 6c4269f955b26b566e8857a3293a1382 75 Pfam PF06906 Protein of unknown function (DUF1272) 1 57 1.1E-30 T 28-03-2018 IPR010696 Protein of unknown function DUF1272 AM393_RS13655 63aa049f2117960143a997e05952629c 461 SUPERFAMILY SSF56954 3 460 2.62E-98 T 28-03-2018 AM393_RS13655 63aa049f2117960143a997e05952629c 461 Gene3D G3DSA:1.20.1600.10 19 461 2.1E-88 T 28-03-2018 AM393_RS13655 63aa049f2117960143a997e05952629c 461 Pfam PF02321 Outer membrane efflux protein 278 456 3.7E-26 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AM393_RS13655 63aa049f2117960143a997e05952629c 461 Pfam PF02321 Outer membrane efflux protein 66 248 2.9E-21 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AM393_RS13655 63aa049f2117960143a997e05952629c 461 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 13 458 8.7E-111 T 28-03-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 AM393_RS20010 dc80a0c956a95642678bcaf9a4e5bc39 409 Pfam PF06224 Winged helix DNA-binding domain 38 381 7.4E-80 T 28-03-2018 IPR009351 Protein of unknown function DUF1006 AM393_RS27890 bd296ef0620fc51aada0c311945c923a 102 SUPERFAMILY SSF53098 1 86 4.4E-18 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM393_RS27890 bd296ef0620fc51aada0c311945c923a 102 Gene3D G3DSA:3.30.420.10 1 97 4.9E-19 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM393_RS27890 bd296ef0620fc51aada0c311945c923a 102 Pfam PF00665 Integrase core domain 1 46 7.3E-13 T 28-03-2018 IPR001584 Integrase, catalytic core GO:0015074 AM393_RS07495 b1ffe04ec69f16c9c1940ef548225b65 495 SUPERFAMILY SSF69705 1 126 1.22E-41 T 28-03-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 AM393_RS07495 b1ffe04ec69f16c9c1940ef548225b65 495 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 410 29.202 T 28-03-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 AM393_RS07495 b1ffe04ec69f16c9c1940ef548225b65 495 Gene3D G3DSA:3.30.300.20 199 276 2.1E-32 T 28-03-2018 IPR015946 K homology domain-like, alpha/beta AM393_RS07495 b1ffe04ec69f16c9c1940ef548225b65 495 Gene3D G3DSA:1.10.150.20 427 495 1.2E-17 T 28-03-2018 AM393_RS07495 b1ffe04ec69f16c9c1940ef548225b65 495 Gene3D G3DSA:1.10.150.20 352 421 1.3E-15 T 28-03-2018 AM393_RS07495 b1ffe04ec69f16c9c1940ef548225b65 495 Gene3D G3DSA:3.30.300.20 278 347 1.9E-12 T 28-03-2018 IPR015946 K homology domain-like, alpha/beta AM393_RS07495 b1ffe04ec69f16c9c1940ef548225b65 495 Pfam PF13184 NusA-like KH domain 230 297 1.6E-27 T 28-03-2018 IPR025249 KH domain, NusA-like GO:0003723 AM393_RS07495 b1ffe04ec69f16c9c1940ef548225b65 495 Pfam PF00575 S1 RNA binding domain 134 195 9.3E-5 T 28-03-2018 IPR003029 S1 domain GO:0003676 AM393_RS07495 b1ffe04ec69f16c9c1940ef548225b65 495 SUPERFAMILY SSF54814 279 343 3.18E-15 T 28-03-2018 IPR009019 K homology domain, prokaryotic type GO:0003723 AM393_RS07495 b1ffe04ec69f16c9c1940ef548225b65 495 SMART SM00316 133 200 3.7E-9 T 28-03-2018 IPR022967 RNA-binding domain, S1 AM393_RS07495 b1ffe04ec69f16c9c1940ef548225b65 495 Gene3D G3DSA:2.40.50.140 129 198 2.6E-13 T 28-03-2018 AM393_RS07495 b1ffe04ec69f16c9c1940ef548225b65 495 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 4 342 2.7E-130 T 28-03-2018 IPR010213 Transcription termination factor NusA GO:0003723 AM393_RS07495 b1ffe04ec69f16c9c1940ef548225b65 495 SUPERFAMILY SSF54814 201 278 1.05E-28 T 28-03-2018 IPR009019 K homology domain, prokaryotic type GO:0003723 AM393_RS07495 b1ffe04ec69f16c9c1940ef548225b65 495 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 440 489 1.8E-18 T 28-03-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication AM393_RS07495 b1ffe04ec69f16c9c1940ef548225b65 495 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 365 414 1.9E-20 T 28-03-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication AM393_RS07495 b1ffe04ec69f16c9c1940ef548225b65 495 Pfam PF14520 Helix-hairpin-helix domain 432 486 4.3E-10 T 28-03-2018 AM393_RS07495 b1ffe04ec69f16c9c1940ef548225b65 495 Gene3D G3DSA:3.30.1480.10 1 128 5.3E-46 T 28-03-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 AM393_RS07495 b1ffe04ec69f16c9c1940ef548225b65 495 SUPERFAMILY SSF47794 429 492 3.3E-18 T 28-03-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 AM393_RS07495 b1ffe04ec69f16c9c1940ef548225b65 495 Pfam PF08529 NusA N-terminal domain 4 123 9.7E-38 T 28-03-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 AM393_RS07495 b1ffe04ec69f16c9c1940ef548225b65 495 SUPERFAMILY SSF47794 355 415 4.55E-17 T 28-03-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 AM393_RS07495 b1ffe04ec69f16c9c1940ef548225b65 495 SUPERFAMILY SSF50249 132 199 2.81E-17 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM393_RS03930 942ed67344cf3bc37b74a6c5bb9e3372 386 SMART SM00830 11 91 5.5E-25 T 28-03-2018 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AM393_RS03930 942ed67344cf3bc37b74a6c5bb9e3372 386 ProSitePatterns PS00857 Prephenate dehydratase signature 1. 261 283 - T 28-03-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 AM393_RS03930 942ed67344cf3bc37b74a6c5bb9e3372 386 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 325 332 - T 28-03-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 AM393_RS03930 942ed67344cf3bc37b74a6c5bb9e3372 386 TIGRFAM TIGR01797 CM_P_1: chorismate mutase 7 89 4.4E-40 T 28-03-2018 IPR010952 Chorismate mutase, gammaproteobacteria GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626 AM393_RS03930 942ed67344cf3bc37b74a6c5bb9e3372 386 PIRSF PIRSF001500 1 380 4.2E-142 T 28-03-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 AM393_RS03930 942ed67344cf3bc37b74a6c5bb9e3372 386 SUPERFAMILY SSF53850 105 291 7.82E-55 T 28-03-2018 AM393_RS03930 942ed67344cf3bc37b74a6c5bb9e3372 386 Pfam PF00800 Prephenate dehydratase 106 286 1.5E-60 T 28-03-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 AM393_RS03930 942ed67344cf3bc37b74a6c5bb9e3372 386 Gene3D G3DSA:3.40.190.10 198 273 2.1E-23 T 28-03-2018 AM393_RS03930 942ed67344cf3bc37b74a6c5bb9e3372 386 SUPERFAMILY SSF55021 280 377 5.95E-22 T 28-03-2018 AM393_RS03930 942ed67344cf3bc37b74a6c5bb9e3372 386 SUPERFAMILY SSF48600 6 93 2.56E-22 T 28-03-2018 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AM393_RS03930 942ed67344cf3bc37b74a6c5bb9e3372 386 Gene3D G3DSA:3.40.190.10 113 197 4.2E-31 T 28-03-2018 AM393_RS03930 942ed67344cf3bc37b74a6c5bb9e3372 386 Gene3D G3DSA:3.30.70.260 294 381 2.5E-23 T 28-03-2018 AM393_RS03930 942ed67344cf3bc37b74a6c5bb9e3372 386 Gene3D G3DSA:1.20.59.10 1 112 7.4E-30 T 28-03-2018 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AM393_RS03930 942ed67344cf3bc37b74a6c5bb9e3372 386 Pfam PF01817 Chorismate mutase type II 11 89 1.9E-17 T 28-03-2018 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AM393_RS15890 4098830d89db593e1d4c1afe3b1216c4 221 SUPERFAMILY SSF56784 4 202 2.24E-25 T 28-03-2018 IPR023214 HAD-like domain AM393_RS15890 4098830d89db593e1d4c1afe3b1216c4 221 Pfam PF12710 haloacid dehalogenase-like hydrolase 7 188 2.6E-34 T 28-03-2018 AM393_RS15890 4098830d89db593e1d4c1afe3b1216c4 221 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 6 203 1.5E-48 T 28-03-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like AM393_RS15890 4098830d89db593e1d4c1afe3b1216c4 221 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 5 190 2.2E-24 T 28-03-2018 AM393_RS15890 4098830d89db593e1d4c1afe3b1216c4 221 Gene3D G3DSA:3.40.50.1000 82 214 1.0E-8 T 28-03-2018 IPR023214 HAD-like domain AM393_RS15890 4098830d89db593e1d4c1afe3b1216c4 221 Gene3D G3DSA:1.20.1440.100 18 81 3.7E-21 T 28-03-2018 AM393_RS04950 5d015f082189c0e7704edde0fa381610 264 Gene3D G3DSA:3.30.2350.10 1 237 3.4E-59 T 28-03-2018 AM393_RS04950 5d015f082189c0e7704edde0fa381610 264 SUPERFAMILY SSF55120 2 237 7.52E-61 T 28-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM393_RS04950 5d015f082189c0e7704edde0fa381610 264 Pfam PF00849 RNA pseudouridylate synthase 11 170 1.3E-28 T 28-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM393_RS04950 5d015f082189c0e7704edde0fa381610 264 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 50 64 - T 28-03-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM393_RS23475 adba88a00dffc7b7cdcb9e58eef11840 398 Gene3D G3DSA:1.20.1250.20 197 393 1.3E-13 T 28-03-2018 AM393_RS23475 adba88a00dffc7b7cdcb9e58eef11840 398 Pfam PF07690 Major Facilitator Superfamily 13 341 7.5E-29 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS23475 adba88a00dffc7b7cdcb9e58eef11840 398 SUPERFAMILY SSF103473 6 382 6.93E-47 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS23475 adba88a00dffc7b7cdcb9e58eef11840 398 Gene3D G3DSA:1.20.1250.20 3 192 1.5E-26 T 28-03-2018 AM393_RS17195 0e575e6bddca90bf5b9528ee17efbe07 56 SUPERFAMILY SSF47598 8 52 9.45E-13 T 28-03-2018 IPR010985 Ribbon-helix-helix GO:0006355 AM393_RS17195 0e575e6bddca90bf5b9528ee17efbe07 56 Pfam PF03869 Arc-like DNA binding domain 8 51 4.6E-12 T 28-03-2018 IPR005569 Arc-like DNA binding domain GO:0003677 AM393_RS17195 0e575e6bddca90bf5b9528ee17efbe07 56 Gene3D G3DSA:1.10.1220.10 2 56 2.6E-14 T 28-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 AM393_RS05980 99a30a1f95a94f9367db542722c257d1 410 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 200 222 - T 28-03-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AM393_RS05980 99a30a1f95a94f9367db542722c257d1 410 SUPERFAMILY SSF51735 108 295 1.01E-58 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS05980 99a30a1f95a94f9367db542722c257d1 410 Gene3D G3DSA:3.40.50.720 1 136 1.4E-41 T 28-03-2018 AM393_RS05980 99a30a1f95a94f9367db542722c257d1 410 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 154 181 - T 28-03-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 AM393_RS05980 99a30a1f95a94f9367db542722c257d1 410 SUPERFAMILY SSF52283 7 138 9.36E-50 T 28-03-2018 AM393_RS05980 99a30a1f95a94f9367db542722c257d1 410 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 14 326 1.4E-36 T 28-03-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 AM393_RS05980 99a30a1f95a94f9367db542722c257d1 410 Gene3D G3DSA:3.30.70.260 328 409 6.8E-17 T 28-03-2018 AM393_RS05980 99a30a1f95a94f9367db542722c257d1 410 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 229 245 - T 28-03-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AM393_RS05980 99a30a1f95a94f9367db542722c257d1 410 SUPERFAMILY SSF55021 328 409 1.68E-19 T 28-03-2018 AM393_RS05980 99a30a1f95a94f9367db542722c257d1 410 Pfam PF01842 ACT domain 345 401 2.0E-6 T 28-03-2018 IPR002912 ACT domain AM393_RS05980 99a30a1f95a94f9367db542722c257d1 410 Gene3D G3DSA:3.40.50.720 137 295 8.8E-43 T 28-03-2018 AM393_RS05980 99a30a1f95a94f9367db542722c257d1 410 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 119 294 4.4E-52 T 28-03-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AM393_RS23285 70429bac1f83df376016c6f4ba577092 228 SMART SM00895 85 209 5.6E-15 T 28-03-2018 IPR011711 GntR, C-terminal AM393_RS23285 70429bac1f83df376016c6f4ba577092 228 Gene3D G3DSA:1.10.10.10 1 71 3.8E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS23285 70429bac1f83df376016c6f4ba577092 228 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 75 1.1E-16 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM393_RS23285 70429bac1f83df376016c6f4ba577092 228 SUPERFAMILY SSF48008 82 213 1.57E-24 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AM393_RS23285 70429bac1f83df376016c6f4ba577092 228 Pfam PF07729 FCD domain 89 208 6.4E-23 T 28-03-2018 IPR011711 GntR, C-terminal AM393_RS23285 70429bac1f83df376016c6f4ba577092 228 SMART SM00345 17 75 7.0E-22 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM393_RS23285 70429bac1f83df376016c6f4ba577092 228 SUPERFAMILY SSF46785 8 99 2.2E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS23285 70429bac1f83df376016c6f4ba577092 228 Gene3D G3DSA:1.20.120.530 72 228 6.4E-27 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AM393_RS17785 4c78fb587dd36690f4266ba85f98b077 371 TIGRFAM TIGR02050 gshA_cyan_rel: carboxylate-amine ligase, YbdK family 13 296 2.3E-101 T 28-03-2018 IPR011793 Putative glutamate--cysteine ligase YbdK GO:0016879 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 AM393_RS17785 4c78fb587dd36690f4266ba85f98b077 371 SUPERFAMILY SSF55931 4 369 5.04E-99 T 28-03-2018 AM393_RS17785 4c78fb587dd36690f4266ba85f98b077 371 Pfam PF04107 Glutamate-cysteine ligase family 2(GCS2) 14 292 2.6E-68 T 28-03-2018 IPR006336 Glutamate--cysteine ligase, GCS2 GO:0004357|GO:0042398 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 AM393_RS17785 4c78fb587dd36690f4266ba85f98b077 371 Hamap MF_01609 Glutamate--cysteine ligase [gshA]. 1 371 88.915 T 28-03-2018 IPR011793 Putative glutamate--cysteine ligase YbdK GO:0016879 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 AM393_RS06775 02f1eb503720fc7e1bdcdd70e9064291 631 Gene3D G3DSA:3.30.565.10 18 217 2.9E-65 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS06775 02f1eb503720fc7e1bdcdd70e9064291 631 SUPERFAMILY SSF56719 389 622 2.51E-77 T 28-03-2018 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 AM393_RS06775 02f1eb503720fc7e1bdcdd70e9064291 631 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 3 629 47.167 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AM393_RS06775 02f1eb503720fc7e1bdcdd70e9064291 631 PRINTS PR01098 Topoisomerase IV subunit B signature 175 192 7.1E-154 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AM393_RS06775 02f1eb503720fc7e1bdcdd70e9064291 631 PRINTS PR01098 Topoisomerase IV subunit B signature 193 214 7.1E-154 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AM393_RS06775 02f1eb503720fc7e1bdcdd70e9064291 631 PRINTS PR01098 Topoisomerase IV subunit B signature 312 327 7.1E-154 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AM393_RS06775 02f1eb503720fc7e1bdcdd70e9064291 631 PRINTS PR01098 Topoisomerase IV subunit B signature 150 165 7.1E-154 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AM393_RS06775 02f1eb503720fc7e1bdcdd70e9064291 631 PRINTS PR01098 Topoisomerase IV subunit B signature 504 520 7.1E-154 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AM393_RS06775 02f1eb503720fc7e1bdcdd70e9064291 631 PRINTS PR01098 Topoisomerase IV subunit B signature 470 482 7.1E-154 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AM393_RS06775 02f1eb503720fc7e1bdcdd70e9064291 631 PRINTS PR01098 Topoisomerase IV subunit B signature 136 150 7.1E-154 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AM393_RS06775 02f1eb503720fc7e1bdcdd70e9064291 631 PRINTS PR01098 Topoisomerase IV subunit B signature 239 262 7.1E-154 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AM393_RS06775 02f1eb503720fc7e1bdcdd70e9064291 631 PRINTS PR01098 Topoisomerase IV subunit B signature 449 470 7.1E-154 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AM393_RS06775 02f1eb503720fc7e1bdcdd70e9064291 631 PRINTS PR01098 Topoisomerase IV subunit B signature 27 40 7.1E-154 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AM393_RS06775 02f1eb503720fc7e1bdcdd70e9064291 631 PRINTS PR01098 Topoisomerase IV subunit B signature 295 311 7.1E-154 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AM393_RS06775 02f1eb503720fc7e1bdcdd70e9064291 631 PRINTS PR01098 Topoisomerase IV subunit B signature 538 560 7.1E-154 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AM393_RS06775 02f1eb503720fc7e1bdcdd70e9064291 631 PRINTS PR01098 Topoisomerase IV subunit B signature 339 362 7.1E-154 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AM393_RS06775 02f1eb503720fc7e1bdcdd70e9064291 631 PRINTS PR01098 Topoisomerase IV subunit B signature 363 388 7.1E-154 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AM393_RS06775 02f1eb503720fc7e1bdcdd70e9064291 631 SUPERFAMILY SSF54211 218 383 3.41E-47 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM393_RS06775 02f1eb503720fc7e1bdcdd70e9064291 631 SMART SM00387 28 174 1.4E-19 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS06775 02f1eb503720fc7e1bdcdd70e9064291 631 SUPERFAMILY SSF55874 6 216 3.73E-68 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS06775 02f1eb503720fc7e1bdcdd70e9064291 631 PRINTS PR00418 DNA topoisomerase II family signature 498 515 5.5E-59 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM393_RS06775 02f1eb503720fc7e1bdcdd70e9064291 631 PRINTS PR00418 DNA topoisomerase II family signature 110 124 5.5E-59 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM393_RS06775 02f1eb503720fc7e1bdcdd70e9064291 631 PRINTS PR00418 DNA topoisomerase II family signature 67 80 5.5E-59 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM393_RS06775 02f1eb503720fc7e1bdcdd70e9064291 631 PRINTS PR00418 DNA topoisomerase II family signature 267 280 5.5E-59 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM393_RS06775 02f1eb503720fc7e1bdcdd70e9064291 631 PRINTS PR00418 DNA topoisomerase II family signature 480 496 5.5E-59 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM393_RS06775 02f1eb503720fc7e1bdcdd70e9064291 631 PRINTS PR00418 DNA topoisomerase II family signature 32 47 5.5E-59 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM393_RS06775 02f1eb503720fc7e1bdcdd70e9064291 631 PRINTS PR00418 DNA topoisomerase II family signature 518 530 5.5E-59 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM393_RS06775 02f1eb503720fc7e1bdcdd70e9064291 631 PRINTS PR00418 DNA topoisomerase II family signature 561 577 5.5E-59 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM393_RS06775 02f1eb503720fc7e1bdcdd70e9064291 631 PRINTS PR00418 DNA topoisomerase II family signature 415 429 5.5E-59 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM393_RS06775 02f1eb503720fc7e1bdcdd70e9064291 631 Gene3D G3DSA:3.30.230.10 218 392 3.1E-39 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AM393_RS06775 02f1eb503720fc7e1bdcdd70e9064291 631 Pfam PF00204 DNA gyrase B 219 385 2.0E-39 T 28-03-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM393_RS06775 02f1eb503720fc7e1bdcdd70e9064291 631 ProSitePatterns PS00177 DNA topoisomerase II signature. 417 425 - T 28-03-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM393_RS06775 02f1eb503720fc7e1bdcdd70e9064291 631 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 29 172 2.0E-16 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS06775 02f1eb503720fc7e1bdcdd70e9064291 631 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 557 621 2.1E-24 T 28-03-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 AM393_RS06775 02f1eb503720fc7e1bdcdd70e9064291 631 SMART SM00433 35 625 7.8E-209 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM393_RS06775 02f1eb503720fc7e1bdcdd70e9064291 631 Gene3D G3DSA:3.40.50.670 397 628 2.0E-78 T 28-03-2018 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM393_RS06775 02f1eb503720fc7e1bdcdd70e9064291 631 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 5 626 0.0 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AM393_RS06775 02f1eb503720fc7e1bdcdd70e9064291 631 Pfam PF01751 Toprim domain 414 522 2.7E-12 T 28-03-2018 IPR006171 TOPRIM domain AM393_RS13670 fb1dd5b598a1a55286d160e4e01cb23e 477 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 368 476 1.8E-19 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS13670 fb1dd5b598a1a55286d160e4e01cb23e 477 SUPERFAMILY SSF158472 207 255 1.1E-5 T 28-03-2018 AM393_RS13670 fb1dd5b598a1a55286d160e4e01cb23e 477 Gene3D G3DSA:3.30.565.10 328 477 3.0E-36 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS13670 fb1dd5b598a1a55286d160e4e01cb23e 477 PRINTS PR00344 Bacterial sensor protein C-terminal signature 423 433 2.1E-9 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM393_RS13670 fb1dd5b598a1a55286d160e4e01cb23e 477 PRINTS PR00344 Bacterial sensor protein C-terminal signature 405 419 2.1E-9 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM393_RS13670 fb1dd5b598a1a55286d160e4e01cb23e 477 PRINTS PR00344 Bacterial sensor protein C-terminal signature 440 458 2.1E-9 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM393_RS13670 fb1dd5b598a1a55286d160e4e01cb23e 477 PRINTS PR00344 Bacterial sensor protein C-terminal signature 463 476 2.1E-9 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM393_RS13670 fb1dd5b598a1a55286d160e4e01cb23e 477 SUPERFAMILY SSF47384 241 325 1.29E-16 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM393_RS13670 fb1dd5b598a1a55286d160e4e01cb23e 477 SUPERFAMILY SSF55874 313 477 8.64E-39 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS13670 fb1dd5b598a1a55286d160e4e01cb23e 477 SMART SM00304 204 257 6.4E-9 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM393_RS13670 fb1dd5b598a1a55286d160e4e01cb23e 477 SMART SM00388 258 324 9.8E-15 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM393_RS13670 fb1dd5b598a1a55286d160e4e01cb23e 477 TIGRFAM TIGR01386 cztS_silS_copS: heavy metal sensor kinase 6 476 2.7E-156 T 28-03-2018 IPR006290 Heavy metal sensor kinase GO:0000160|GO:0004673|GO:0016020 AM393_RS13670 fb1dd5b598a1a55286d160e4e01cb23e 477 SMART SM00387 368 477 1.5E-32 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS13670 fb1dd5b598a1a55286d160e4e01cb23e 477 Pfam PF00512 His Kinase A (phospho-acceptor) domain 259 323 1.6E-11 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM393_RS13670 fb1dd5b598a1a55286d160e4e01cb23e 477 Pfam PF00672 HAMP domain 208 253 2.1E-7 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM393_RS13670 fb1dd5b598a1a55286d160e4e01cb23e 477 Gene3D G3DSA:1.10.287.130 248 320 1.6E-11 T 28-03-2018 AM393_RS13615 2c5ca2c568e97f6d7e197ddc322901db 239 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 126 154 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM393_RS13615 2c5ca2c568e97f6d7e197ddc322901db 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 139 158 1.3E-16 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS13615 2c5ca2c568e97f6d7e197ddc322901db 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 1.3E-16 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS13615 2c5ca2c568e97f6d7e197ddc322901db 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 113 129 1.3E-16 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS13615 2c5ca2c568e97f6d7e197ddc322901db 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 177 1.3E-16 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS13615 2c5ca2c568e97f6d7e197ddc322901db 239 SUPERFAMILY SSF51735 3 236 3.36E-51 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS13615 2c5ca2c568e97f6d7e197ddc322901db 239 Pfam PF00106 short chain dehydrogenase 3 180 2.0E-36 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS13615 2c5ca2c568e97f6d7e197ddc322901db 239 Gene3D G3DSA:3.40.50.720 149 219 1.1E-9 T 28-03-2018 AM393_RS13615 2c5ca2c568e97f6d7e197ddc322901db 239 Gene3D G3DSA:3.40.50.720 2 148 7.5E-39 T 28-03-2018 AM393_RS14810 37ebbd4f1906873860fc501a72793cdd 313 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 1 310 2.1E-132 T 28-03-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AM393_RS14810 37ebbd4f1906873860fc501a72793cdd 313 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 7 311 39.227 T 28-03-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AM393_RS14810 37ebbd4f1906873860fc501a72793cdd 313 SUPERFAMILY SSF81799 114 213 2.35E-35 T 28-03-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AM393_RS14810 37ebbd4f1906873860fc501a72793cdd 313 Gene3D G3DSA:3.40.50.150 209 296 0.066 T 28-03-2018 AM393_RS14810 37ebbd4f1906873860fc501a72793cdd 313 Gene3D G3DSA:1.10.150.170 112 208 9.2E-37 T 28-03-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AM393_RS14810 37ebbd4f1906873860fc501a72793cdd 313 SUPERFAMILY SSF53335 7 113 2.69E-46 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM393_RS14810 37ebbd4f1906873860fc501a72793cdd 313 SUPERFAMILY SSF53335 213 310 2.69E-46 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM393_RS14810 37ebbd4f1906873860fc501a72793cdd 313 PIRSF PIRSF004486 1 312 1.9E-103 T 28-03-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AM393_RS14810 37ebbd4f1906873860fc501a72793cdd 313 Pfam PF01795 MraW methylase family 5 310 5.2E-121 T 28-03-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AM393_RS04855 84b295cde25ad3789cff8ff4f8b2d22c 471 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 217 426 8.7E-52 T 28-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AM393_RS04855 84b295cde25ad3789cff8ff4f8b2d22c 471 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 215 448 1.9E-90 T 28-03-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AM393_RS04855 84b295cde25ad3789cff8ff4f8b2d22c 471 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 295 328 - T 28-03-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AM393_RS04855 84b295cde25ad3789cff8ff4f8b2d22c 471 Gene3D G3DSA:3.30.950.10 340 469 5.6E-39 T 28-03-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AM393_RS04855 84b295cde25ad3789cff8ff4f8b2d22c 471 Pfam PF13241 Putative NAD(P)-binding 6 115 2.3E-28 T 28-03-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AM393_RS04855 84b295cde25ad3789cff8ff4f8b2d22c 471 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 220 234 - T 28-03-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AM393_RS04855 84b295cde25ad3789cff8ff4f8b2d22c 471 SUPERFAMILY SSF53790 212 457 1.44E-81 T 28-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AM393_RS04855 84b295cde25ad3789cff8ff4f8b2d22c 471 Pfam PF10414 Sirohaem synthase dimerisation region 150 207 1.6E-19 T 28-03-2018 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AM393_RS04855 84b295cde25ad3789cff8ff4f8b2d22c 471 Gene3D G3DSA:3.30.160.110 121 148 1.1E-15 T 28-03-2018 AM393_RS04855 84b295cde25ad3789cff8ff4f8b2d22c 471 Gene3D G3DSA:3.40.1010.10 214 339 2.7E-37 T 28-03-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AM393_RS04855 84b295cde25ad3789cff8ff4f8b2d22c 471 Hamap MF_01646 Siroheme synthase [cysG]. 1 457 50.712 T 28-03-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AM393_RS04855 84b295cde25ad3789cff8ff4f8b2d22c 471 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 207 1.9E-76 T 28-03-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AM393_RS04855 84b295cde25ad3789cff8ff4f8b2d22c 471 Gene3D G3DSA:3.40.50.720 3 120 1.9E-20 T 28-03-2018 AM393_RS04855 84b295cde25ad3789cff8ff4f8b2d22c 471 Pfam PF14824 Sirohaem biosynthesis protein central 119 145 1.7E-8 T 28-03-2018 IPR028281 Siroheme synthase, central domain KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AM393_RS04855 84b295cde25ad3789cff8ff4f8b2d22c 471 SUPERFAMILY SSF51735 2 113 7.32E-22 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS04855 84b295cde25ad3789cff8ff4f8b2d22c 471 Gene3D G3DSA:1.10.8.210 151 208 2.3E-19 T 28-03-2018 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AM393_RS04855 84b295cde25ad3789cff8ff4f8b2d22c 471 PIRSF PIRSF036426 1 464 8.0E-200 T 28-03-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AM393_RS04855 84b295cde25ad3789cff8ff4f8b2d22c 471 SUPERFAMILY SSF75615 114 208 1.27E-27 T 28-03-2018 AM393_RS07750 871e2a2be53ec589cd3561ac96663470 472 Gene3D G3DSA:3.40.50.20 145 239 5.5E-17 T 28-03-2018 AM393_RS07750 871e2a2be53ec589cd3561ac96663470 472 Gene3D G3DSA:1.10.1060.10 2 144 7.1E-41 T 28-03-2018 AM393_RS07750 871e2a2be53ec589cd3561ac96663470 472 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 148 459 8.8E-24 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS07750 871e2a2be53ec589cd3561ac96663470 472 SUPERFAMILY SSF51971 145 401 4.3E-68 T 28-03-2018 AM393_RS07750 871e2a2be53ec589cd3561ac96663470 472 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 6 472 7.3E-267 T 28-03-2018 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 AM393_RS07750 871e2a2be53ec589cd3561ac96663470 472 SUPERFAMILY SSF46548 7 157 2.14E-41 T 28-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AM393_RS07750 871e2a2be53ec589cd3561ac96663470 472 Gene3D G3DSA:3.50.50.60 240 312 1.6E-19 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS07750 871e2a2be53ec589cd3561ac96663470 472 Gene3D G3DSA:3.50.50.60 313 401 4.8E-17 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS07750 871e2a2be53ec589cd3561ac96663470 472 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 25 134 6.1E-38 T 28-03-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 AM393_RS07750 871e2a2be53ec589cd3561ac96663470 472 Gene3D G3DSA:3.50.50.60 403 472 8.5E-8 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS07750 871e2a2be53ec589cd3561ac96663470 472 PRINTS PR00419 Adrenodoxin reductase family signature 324 337 3.0E-37 T 28-03-2018 AM393_RS07750 871e2a2be53ec589cd3561ac96663470 472 PRINTS PR00419 Adrenodoxin reductase family signature 148 170 3.0E-37 T 28-03-2018 AM393_RS07750 871e2a2be53ec589cd3561ac96663470 472 PRINTS PR00419 Adrenodoxin reductase family signature 171 184 3.0E-37 T 28-03-2018 AM393_RS07750 871e2a2be53ec589cd3561ac96663470 472 PRINTS PR00419 Adrenodoxin reductase family signature 290 304 3.0E-37 T 28-03-2018 AM393_RS07750 871e2a2be53ec589cd3561ac96663470 472 PRINTS PR00419 Adrenodoxin reductase family signature 213 223 3.0E-37 T 28-03-2018 AM393_RS09335 8e4801aa429cce1ac7adeaab5928c771 220 ProSitePatterns PS01068 OmpA-like domain. 148 192 - T 28-03-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 AM393_RS09335 8e4801aa429cce1ac7adeaab5928c771 220 Pfam PF00691 OmpA family 115 210 3.3E-23 T 28-03-2018 IPR006665 OmpA-like domain AM393_RS09335 8e4801aa429cce1ac7adeaab5928c771 220 PRINTS PR01021 OMPA domain signature 146 161 5.5E-14 T 28-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AM393_RS09335 8e4801aa429cce1ac7adeaab5928c771 220 PRINTS PR01021 OMPA domain signature 116 138 5.5E-14 T 28-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AM393_RS09335 8e4801aa429cce1ac7adeaab5928c771 220 PRINTS PR01021 OMPA domain signature 161 177 5.5E-14 T 28-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AM393_RS09335 8e4801aa429cce1ac7adeaab5928c771 220 Pfam PF13488 Glycine zipper 37 85 7.8E-13 T 28-03-2018 AM393_RS09335 8e4801aa429cce1ac7adeaab5928c771 220 SUPERFAMILY SSF103088 103 218 1.02E-38 T 28-03-2018 IPR006665 OmpA-like domain AM393_RS09335 8e4801aa429cce1ac7adeaab5928c771 220 Gene3D G3DSA:3.30.1330.60 83 220 2.9E-43 T 28-03-2018 IPR006665 OmpA-like domain AM393_RS09335 8e4801aa429cce1ac7adeaab5928c771 220 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 179 198 2.4E-7 T 28-03-2018 AM393_RS09335 8e4801aa429cce1ac7adeaab5928c771 220 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 161 178 2.4E-7 T 28-03-2018 AM393_RS09335 8e4801aa429cce1ac7adeaab5928c771 220 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 199 219 2.4E-7 T 28-03-2018 AM393_RS09335 8e4801aa429cce1ac7adeaab5928c771 220 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 132 158 2.4E-7 T 28-03-2018 AM393_RS12170 d76f82eb53957c2f7de8e3fccd503df0 807 Gene3D G3DSA:3.10.20.310 92 173 2.2E-14 T 28-03-2018 AM393_RS12170 d76f82eb53957c2f7de8e3fccd503df0 807 Gene3D G3DSA:3.10.20.310 174 265 7.0E-21 T 28-03-2018 AM393_RS12170 d76f82eb53957c2f7de8e3fccd503df0 807 Pfam PF07244 Surface antigen variable number repeat 92 172 5.1E-12 T 28-03-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 AM393_RS12170 d76f82eb53957c2f7de8e3fccd503df0 807 Pfam PF07244 Surface antigen variable number repeat 176 263 4.2E-15 T 28-03-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 AM393_RS12170 d76f82eb53957c2f7de8e3fccd503df0 807 Pfam PF07244 Surface antigen variable number repeat 347 421 6.4E-13 T 28-03-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 AM393_RS12170 d76f82eb53957c2f7de8e3fccd503df0 807 Gene3D G3DSA:3.10.20.310 350 386 0.061 T 28-03-2018 AM393_RS12170 d76f82eb53957c2f7de8e3fccd503df0 807 PIRSF PIRSF006076 1 807 5.6E-243 T 28-03-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 AM393_RS12170 d76f82eb53957c2f7de8e3fccd503df0 807 Gene3D G3DSA:3.10.20.310 266 346 5.5E-5 T 28-03-2018 AM393_RS12170 d76f82eb53957c2f7de8e3fccd503df0 807 Gene3D G3DSA:3.10.20.310 20 91 3.3E-10 T 28-03-2018 AM393_RS12170 d76f82eb53957c2f7de8e3fccd503df0 807 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 25 807 2.0E-269 T 28-03-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 AM393_RS12170 d76f82eb53957c2f7de8e3fccd503df0 807 Gene3D G3DSA:2.40.160.50 387 807 4.5E-83 T 28-03-2018 AM393_RS12170 d76f82eb53957c2f7de8e3fccd503df0 807 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 7 807 24.649 T 28-03-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 AM393_RS12170 d76f82eb53957c2f7de8e3fccd503df0 807 Pfam PF01103 Surface antigen 448 807 1.4E-90 T 28-03-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 AM393_RS01675 53dc0a3c50292d7998d85021973264b6 258 Gene3D G3DSA:3.20.20.70 4 252 6.6E-57 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM393_RS01675 53dc0a3c50292d7998d85021973264b6 258 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 256 44.625 T 28-03-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 AM393_RS01675 53dc0a3c50292d7998d85021973264b6 258 SUPERFAMILY SSF51366 1 257 5.1E-72 T 28-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AM393_RS01675 53dc0a3c50292d7998d85021973264b6 258 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 256 9.4E-117 T 28-03-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 AM393_RS01675 53dc0a3c50292d7998d85021973264b6 258 Pfam PF00977 Histidine biosynthesis protein 5 239 3.5E-77 T 28-03-2018 IPR006062 Histidine biosynthesis GO:0000105 AM393_RS18550 944b41de981184058badbb950ed676ff 546 SUPERFAMILY SSF55957 433 544 1.92E-19 T 28-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM393_RS18550 944b41de981184058badbb950ed676ff 546 Gene3D G3DSA:3.40.120.10 214 332 1.2E-20 T 28-03-2018 AM393_RS18550 944b41de981184058badbb950ed676ff 546 Gene3D G3DSA:3.30.310.50 443 546 8.4E-20 T 28-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM393_RS18550 944b41de981184058badbb950ed676ff 546 Gene3D G3DSA:3.40.120.10 333 442 1.4E-27 T 28-03-2018 AM393_RS18550 944b41de981184058badbb950ed676ff 546 Gene3D G3DSA:3.40.120.10 12 213 4.9E-45 T 28-03-2018 AM393_RS18550 944b41de981184058badbb950ed676ff 546 TIGRFAM TIGR01132 pgm: phosphoglucomutase, alpha-D-glucose phosphate-specific 1 544 0.0 T 28-03-2018 IPR005852 Phosphoglucomutase, alpha-D-glucose specific GO:0004614|GO:0005975 KEGG: 00010+5.4.2.2|KEGG: 00030+5.4.2.2|KEGG: 00052+5.4.2.2|KEGG: 00230+5.4.2.2|KEGG: 00500+5.4.2.2|KEGG: 00520+5.4.2.2|KEGG: 00521+5.4.2.2|MetaCyc: PWY-2723|MetaCyc: PWY-3801|MetaCyc: PWY-5384|MetaCyc: PWY-5661|MetaCyc: PWY-5940|MetaCyc: PWY-5941|MetaCyc: PWY-622|MetaCyc: PWY-6317|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|MetaCyc: PWY-7343 AM393_RS18550 944b41de981184058badbb950ed676ff 546 SUPERFAMILY SSF53738 26 235 3.53E-49 T 28-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM393_RS18550 944b41de981184058badbb950ed676ff 546 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 40 180 2.3E-35 T 28-03-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM393_RS18550 944b41de981184058badbb950ed676ff 546 SUPERFAMILY SSF53738 305 446 1.55E-32 T 28-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM393_RS18550 944b41de981184058badbb950ed676ff 546 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 486 538 3.3E-7 T 28-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM393_RS18550 944b41de981184058badbb950ed676ff 546 SUPERFAMILY SSF53738 209 317 3.3E-8 T 28-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM393_RS18550 944b41de981184058badbb950ed676ff 546 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 140 149 - T 28-03-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM393_RS18550 944b41de981184058badbb950ed676ff 546 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 210 317 2.8E-20 T 28-03-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM393_RS18550 944b41de981184058badbb950ed676ff 546 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 320 440 1.0E-30 T 28-03-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM393_RS09465 d90728a5f7a8d10ed0674dc137292507 272 SMART SM00047 128 254 2.6E-27 T 28-03-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 AM393_RS09465 d90728a5f7a8d10ed0674dc137292507 272 Gene3D G3DSA:1.10.530.10 71 270 3.8E-23 T 28-03-2018 AM393_RS09465 d90728a5f7a8d10ed0674dc137292507 272 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 142 265 5.2E-17 T 28-03-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 AM393_RS14580 a673a3e7a1505b5cc86edfb935a97081 159 PIRSF PIRSF000194 1 159 8.0E-58 T 28-03-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 AM393_RS14580 a673a3e7a1505b5cc86edfb935a97081 159 PRINTS PR00070 Dihydrofolate reductase signature 27 35 1.4E-14 T 28-03-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 AM393_RS14580 a673a3e7a1505b5cc86edfb935a97081 159 PRINTS PR00070 Dihydrofolate reductase signature 40 51 1.4E-14 T 28-03-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 AM393_RS14580 a673a3e7a1505b5cc86edfb935a97081 159 PRINTS PR00070 Dihydrofolate reductase signature 90 104 1.4E-14 T 28-03-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 AM393_RS14580 a673a3e7a1505b5cc86edfb935a97081 159 PRINTS PR00070 Dihydrofolate reductase signature 13 23 1.4E-14 T 28-03-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 AM393_RS14580 a673a3e7a1505b5cc86edfb935a97081 159 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 13 35 - T 28-03-2018 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-1474151|Reactome: R-HSA-196757|Reactome: R-HSA-539107 AM393_RS14580 a673a3e7a1505b5cc86edfb935a97081 159 Gene3D G3DSA:3.40.430.10 1 159 3.4E-53 T 28-03-2018 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 AM393_RS14580 a673a3e7a1505b5cc86edfb935a97081 159 SUPERFAMILY SSF53597 1 159 3.14E-56 T 28-03-2018 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 AM393_RS14580 a673a3e7a1505b5cc86edfb935a97081 159 Pfam PF00186 Dihydrofolate reductase 1 158 7.1E-59 T 28-03-2018 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0006545|GO:0009165|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 AM393_RS02495 8116dff24829e10e0dadb90b7bb130e2 877 Gene3D G3DSA:3.90.199.10 285 374 4.0E-9 T 28-03-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 AM393_RS02495 8116dff24829e10e0dadb90b7bb130e2 877 Gene3D G3DSA:2.120.10.90 533 856 1.9E-135 T 28-03-2018 AM393_RS02495 8116dff24829e10e0dadb90b7bb130e2 877 SUPERFAMILY SSF101904 533 851 2.35E-112 T 28-03-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal AM393_RS02495 8116dff24829e10e0dadb90b7bb130e2 877 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 8 840 0.0 T 28-03-2018 AM393_RS02495 8116dff24829e10e0dadb90b7bb130e2 877 SMART SM00434 11 499 7.7E-296 T 28-03-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM393_RS02495 8116dff24829e10e0dadb90b7bb130e2 877 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 645 688 1.6E-8 T 28-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AM393_RS02495 8116dff24829e10e0dadb90b7bb130e2 877 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 538 584 9.2E-10 T 28-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AM393_RS02495 8116dff24829e10e0dadb90b7bb130e2 877 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 692 737 3.8E-16 T 28-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AM393_RS02495 8116dff24829e10e0dadb90b7bb130e2 877 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 744 789 4.4E-14 T 28-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AM393_RS02495 8116dff24829e10e0dadb90b7bb130e2 877 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 793 839 8.6E-13 T 28-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AM393_RS02495 8116dff24829e10e0dadb90b7bb130e2 877 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 588 637 3.5E-11 T 28-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AM393_RS02495 8116dff24829e10e0dadb90b7bb130e2 877 Gene3D G3DSA:3.90.199.10 34 284 1.0E-113 T 28-03-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 AM393_RS02495 8116dff24829e10e0dadb90b7bb130e2 877 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 506 2.9E-152 T 28-03-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM393_RS02495 8116dff24829e10e0dadb90b7bb130e2 877 Gene3D G3DSA:1.10.268.10 375 497 2.7E-50 T 28-03-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM393_RS02495 8116dff24829e10e0dadb90b7bb130e2 877 SUPERFAMILY SSF56719 30 521 1.16E-180 T 28-03-2018 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 AM393_RS02495 8116dff24829e10e0dadb90b7bb130e2 877 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 1 841 24.537 T 28-03-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AM393_RS26650 951dd280cc3402e9521d3c1fab6b91c7 300 Gene3D G3DSA:3.90.550.10 1 300 5.1E-61 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM393_RS26650 951dd280cc3402e9521d3c1fab6b91c7 300 SUPERFAMILY SSF53448 8 293 4.06E-64 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM393_RS26650 951dd280cc3402e9521d3c1fab6b91c7 300 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 8 275 1.1E-115 T 28-03-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 AM393_RS26650 951dd280cc3402e9521d3c1fab6b91c7 300 Pfam PF00483 Nucleotidyl transferase 10 276 2.0E-26 T 28-03-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 AM393_RS03810 a99f691cd97ca0cb2741bfbf86bd71ee 191 Pfam PF08281 Sigma-70, region 4 129 180 4.5E-19 T 28-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM393_RS03810 a99f691cd97ca0cb2741bfbf86bd71ee 191 SUPERFAMILY SSF88946 2 104 2.83E-31 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM393_RS03810 a99f691cd97ca0cb2741bfbf86bd71ee 191 Gene3D G3DSA:1.10.10.10 116 187 2.8E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS03810 a99f691cd97ca0cb2741bfbf86bd71ee 191 Pfam PF04542 Sigma-70 region 2 25 91 1.1E-17 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM393_RS03810 a99f691cd97ca0cb2741bfbf86bd71ee 191 Gene3D G3DSA:1.10.1740.10 1 115 3.7E-30 T 28-03-2018 AM393_RS03810 a99f691cd97ca0cb2741bfbf86bd71ee 191 SUPERFAMILY SSF88659 122 183 9.53E-19 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM393_RS03810 a99f691cd97ca0cb2741bfbf86bd71ee 191 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 183 9.7E-32 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM393_RS03810 a99f691cd97ca0cb2741bfbf86bd71ee 191 TIGRFAM TIGR02939 RpoE_Sigma70: RNA polymerase sigma factor RpoE 1 189 6.5E-98 T 28-03-2018 IPR014286 RNA polymerase sigma-70 RpoE type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM393_RS11400 7a1cd15da17a1ded6345e98afb84a8e2 106 Gene3D G3DSA:3.30.920.10 1 106 6.4E-35 T 28-03-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AM393_RS11400 7a1cd15da17a1ded6345e98afb84a8e2 106 ProSitePatterns PS01344 Frataxin family signature. 50 64 - T 28-03-2018 IPR020895 Frataxin conserved site Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AM393_RS11400 7a1cd15da17a1ded6345e98afb84a8e2 106 SUPERFAMILY SSF55387 1 105 2.09E-40 T 28-03-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AM393_RS11400 7a1cd15da17a1ded6345e98afb84a8e2 106 Pfam PF01491 Frataxin-like domain 1 102 1.6E-30 T 28-03-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AM393_RS11400 7a1cd15da17a1ded6345e98afb84a8e2 106 SMART SM01219 1 106 7.5E-57 T 28-03-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AM393_RS11400 7a1cd15da17a1ded6345e98afb84a8e2 106 Hamap MF_00142 Protein CyaY [cyaY]. 1 105 29.069 T 28-03-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AM393_RS11400 7a1cd15da17a1ded6345e98afb84a8e2 106 TIGRFAM TIGR03421 FeS_CyaY: iron donor protein CyaY 2 105 8.1E-44 T 28-03-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AM393_RS23880 5b78e023a74278ffed92b98552052959 291 Gene3D G3DSA:3.40.50.720 3 174 3.1E-28 T 28-03-2018 AM393_RS23880 5b78e023a74278ffed92b98552052959 291 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 167 284 5.0E-14 T 28-03-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 AM393_RS23880 5b78e023a74278ffed92b98552052959 291 Gene3D G3DSA:1.10.1040.10 175 290 2.6E-21 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AM393_RS23880 5b78e023a74278ffed92b98552052959 291 SUPERFAMILY SSF48179 165 286 6.91E-24 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AM393_RS23880 5b78e023a74278ffed92b98552052959 291 PIRSF PIRSF000103 1 291 3.5E-67 T 28-03-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 AM393_RS23880 5b78e023a74278ffed92b98552052959 291 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 6 162 1.3E-34 T 28-03-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 AM393_RS23880 5b78e023a74278ffed92b98552052959 291 SUPERFAMILY SSF51735 6 165 1.23E-33 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS10555 a7ca5ac8e23ca8a6b8f02995a49c93ea 152 SUPERFAMILY SSF46785 4 66 2.69E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS10555 a7ca5ac8e23ca8a6b8f02995a49c93ea 152 SMART SM00344 6 113 3.9E-42 T 28-03-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AM393_RS10555 a7ca5ac8e23ca8a6b8f02995a49c93ea 152 Pfam PF01037 Lrp/AsnC ligand binding domain 76 143 1.8E-17 T 28-03-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AM393_RS10555 a7ca5ac8e23ca8a6b8f02995a49c93ea 152 Pfam PF13404 AsnC-type helix-turn-helix domain 6 47 1.4E-12 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AM393_RS10555 a7ca5ac8e23ca8a6b8f02995a49c93ea 152 Gene3D G3DSA:1.10.10.10 1 57 4.9E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS10555 a7ca5ac8e23ca8a6b8f02995a49c93ea 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 22 33 1.4E-11 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AM393_RS10555 a7ca5ac8e23ca8a6b8f02995a49c93ea 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 33 52 1.4E-11 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AM393_RS10555 a7ca5ac8e23ca8a6b8f02995a49c93ea 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 6 22 1.4E-11 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AM393_RS10555 a7ca5ac8e23ca8a6b8f02995a49c93ea 152 Gene3D G3DSA:3.30.70.920 59 150 3.2E-20 T 28-03-2018 AM393_RS10555 a7ca5ac8e23ca8a6b8f02995a49c93ea 152 SUPERFAMILY SSF54909 68 152 4.56E-19 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel AM393_RS26435 3c7342a06052e10eb7d9e4433f9ef493 277 Pfam PF03618 Kinase/pyrophosphorylase 9 267 8.3E-72 T 28-03-2018 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 AM393_RS26435 3c7342a06052e10eb7d9e4433f9ef493 277 Gene3D G3DSA:3.40.50.300 191 277 4.7E-4 T 28-03-2018 AM393_RS26435 3c7342a06052e10eb7d9e4433f9ef493 277 Hamap MF_01062 Phosphoenolpyruvate synthase regulatory protein [ppsR]. 6 276 72.091 T 28-03-2018 IPR026530 Phosphoenolpyruvate synthase regulatory protein AM393_RS26435 3c7342a06052e10eb7d9e4433f9ef493 277 Gene3D G3DSA:3.40.50.300 151 190 0.25 T 28-03-2018 AM393_RS16275 b346df36156938975bb9832f90f8df94 121 SUPERFAMILY SSF54593 2 120 2.26E-19 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM393_RS16275 b346df36156938975bb9832f90f8df94 121 Gene3D G3DSA:3.10.180.10 2 121 1.6E-14 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM393_RS16275 b346df36156938975bb9832f90f8df94 121 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 115 3.4E-7 T 28-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AM393_RS02905 d13ba2a66b56ba86d02689fcc93105a7 361 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 28-03-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AM393_RS02905 d13ba2a66b56ba86d02689fcc93105a7 361 TIGRFAM TIGR00033 aroC: chorismate synthase 10 350 3.7E-137 T 28-03-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AM393_RS02905 d13ba2a66b56ba86d02689fcc93105a7 361 Pfam PF01264 Chorismate synthase 10 345 1.4E-140 T 28-03-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AM393_RS02905 d13ba2a66b56ba86d02689fcc93105a7 361 SUPERFAMILY SSF103263 4 352 2.09E-146 T 28-03-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AM393_RS02905 d13ba2a66b56ba86d02689fcc93105a7 361 PIRSF PIRSF001456 3 360 6.7E-140 T 28-03-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AM393_RS02905 d13ba2a66b56ba86d02689fcc93105a7 361 Hamap MF_00300 Chorismate synthase [aroC]. 10 352 37.229 T 28-03-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AM393_RS02905 d13ba2a66b56ba86d02689fcc93105a7 361 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 28-03-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AM393_RS02905 d13ba2a66b56ba86d02689fcc93105a7 361 Gene3D G3DSA:3.60.150.10 3 359 6.0E-159 T 28-03-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AM393_RS02905 d13ba2a66b56ba86d02689fcc93105a7 361 ProSitePatterns PS00789 Chorismate synthase signature 3. 319 335 - T 28-03-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AM393_RS17580 9c85f283edc8d43929a980e990b427e3 494 Gene3D G3DSA:3.40.309.10 283 476 2.7E-62 T 28-03-2018 AM393_RS17580 9c85f283edc8d43929a980e990b427e3 494 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 266 273 - T 28-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 AM393_RS17580 9c85f283edc8d43929a980e990b427e3 494 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 294 305 - T 28-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 AM393_RS17580 9c85f283edc8d43929a980e990b427e3 494 Gene3D G3DSA:3.40.605.10 8 282 7.7E-96 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AM393_RS17580 9c85f283edc8d43929a980e990b427e3 494 Pfam PF00171 Aldehyde dehydrogenase family 32 490 5.2E-156 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AM393_RS17580 9c85f283edc8d43929a980e990b427e3 494 SUPERFAMILY SSF53720 10 494 5.89E-157 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AM393_RS20715 3d189e9811f972d4f1fb73d19d3c8a0a 1077 Pfam PF10150 Ribonuclease E/G family 121 391 3.1E-93 T 28-03-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 AM393_RS20715 3d189e9811f972d4f1fb73d19d3c8a0a 1077 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 425 1.4E-171 T 28-03-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 AM393_RS20715 3d189e9811f972d4f1fb73d19d3c8a0a 1077 Gene3D G3DSA:2.40.50.140 33 124 2.8E-31 T 28-03-2018 AM393_RS20715 3d189e9811f972d4f1fb73d19d3c8a0a 1077 SMART SM00316 37 119 9.9E-12 T 28-03-2018 IPR022967 RNA-binding domain, S1 AM393_RS20715 3d189e9811f972d4f1fb73d19d3c8a0a 1077 Pfam PF00575 S1 RNA binding domain 36 118 3.6E-16 T 28-03-2018 IPR003029 S1 domain GO:0003676 AM393_RS20715 3d189e9811f972d4f1fb73d19d3c8a0a 1077 Pfam PF12111 Polyribonucleotide phosphorylase C terminal 1038 1074 6.2E-16 T 28-03-2018 IPR021968 Polyribonucleotide phosphorylase C-terminal AM393_RS20715 3d189e9811f972d4f1fb73d19d3c8a0a 1077 Hamap MF_00970 Ribonuclease E [rne]. 1 1063 38.939 T 28-03-2018 IPR028878 Ribonuclease E GO:0006396|GO:0008995 AM393_RS20715 3d189e9811f972d4f1fb73d19d3c8a0a 1077 SUPERFAMILY SSF50249 40 124 1.43E-20 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM393_RS16140 656202065427dfec5946fd28bbcb5b71 226 Pfam PF07302 AroM protein 6 225 1.1E-69 T 28-03-2018 IPR010843 Uncharacterised protein family AroM AM393_RS16140 656202065427dfec5946fd28bbcb5b71 226 ProDom PD037589 AROM ARO OPERON REGULATED BY AROR BIOSYNTHESIS TRANSCRIPTION AMINO AROMATIC 6 224 7.0E-68 T 28-03-2018 IPR010843 Uncharacterised protein family AroM AM393_RS16140 656202065427dfec5946fd28bbcb5b71 226 Gene3D G3DSA:3.40.50.1860 117 211 2.7E-4 T 28-03-2018 AM393_RS11045 0c69d682da0a3abb53b872483dbbf4a2 293 SUPERFAMILY SSF103481 42 142 2.48E-15 T 28-03-2018 AM393_RS11045 0c69d682da0a3abb53b872483dbbf4a2 293 Pfam PF00892 EamA-like transporter family 150 287 8.2E-25 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM393_RS11045 0c69d682da0a3abb53b872483dbbf4a2 293 Pfam PF00892 EamA-like transporter family 14 139 3.5E-21 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM393_RS11045 0c69d682da0a3abb53b872483dbbf4a2 293 SUPERFAMILY SSF103481 187 290 2.88E-14 T 28-03-2018 AM393_RS24045 8cdac7185f8cdab5a3f896c304422bd8 669 SMART SM00387 558 664 2.0E-23 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS24045 8cdac7185f8cdab5a3f896c304422bd8 669 Gene3D G3DSA:1.10.287.130 407 512 2.7E-6 T 28-03-2018 AM393_RS24045 8cdac7185f8cdab5a3f896c304422bd8 669 Gene3D G3DSA:3.30.565.10 518 669 3.3E-28 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS24045 8cdac7185f8cdab5a3f896c304422bd8 669 SUPERFAMILY SSF47384 444 512 1.96E-7 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM393_RS24045 8cdac7185f8cdab5a3f896c304422bd8 669 SMART SM00388 448 516 2.8E-6 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM393_RS24045 8cdac7185f8cdab5a3f896c304422bd8 669 PIRSF PIRSF037119 403 666 4.2E-118 T 28-03-2018 IPR017116 Signal transduction histidine kinase, PgtB AM393_RS24045 8cdac7185f8cdab5a3f896c304422bd8 669 PIRSF PIRSF037119 6 408 3.6E-130 T 28-03-2018 IPR017116 Signal transduction histidine kinase, PgtB AM393_RS24045 8cdac7185f8cdab5a3f896c304422bd8 669 Pfam PF00512 His Kinase A (phospho-acceptor) domain 450 513 3.6E-8 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM393_RS24045 8cdac7185f8cdab5a3f896c304422bd8 669 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 558 662 1.0E-15 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS24045 8cdac7185f8cdab5a3f896c304422bd8 669 SUPERFAMILY SSF55874 515 660 3.01E-29 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS24045 8cdac7185f8cdab5a3f896c304422bd8 669 SMART SM00304 365 417 5.6E-6 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM393_RS22440 c5a6412117e0d93ff69118d6654ddf4b 309 Gene3D G3DSA:3.40.50.720 2 165 3.0E-8 T 28-03-2018 AM393_RS22440 c5a6412117e0d93ff69118d6654ddf4b 309 Pfam PF05368 NmrA-like family 13 246 1.8E-16 T 28-03-2018 IPR008030 NmrA-like domain Reactome: R-HSA-70635 AM393_RS22440 c5a6412117e0d93ff69118d6654ddf4b 309 SUPERFAMILY SSF51735 11 263 1.83E-22 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS22440 c5a6412117e0d93ff69118d6654ddf4b 309 Gene3D G3DSA:3.90.25.10 166 295 5.7E-12 T 28-03-2018 AM393_RS07665 e70fc8ce3172991ad593ec3f172e53e5 191 PIRSF PIRSF028513 1 186 9.9E-41 T 28-03-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 AM393_RS07665 e70fc8ce3172991ad593ec3f172e53e5 191 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 10 183 6.2E-56 T 28-03-2018 IPR010664 Lipopolysaccharide assembly, LptC-related AM393_RS07665 e70fc8ce3172991ad593ec3f172e53e5 191 Hamap MF_01915 Lipopolysaccharide export system protein LptC [lptC]. 4 185 27.887 T 28-03-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 AM393_RS07665 e70fc8ce3172991ad593ec3f172e53e5 191 Gene3D G3DSA:2.60.450.10 46 150 5.4E-6 T 28-03-2018 AM393_RS07665 e70fc8ce3172991ad593ec3f172e53e5 191 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 6 182 2.3E-55 T 28-03-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 AM393_RS02555 7da0385ac264dce7058645b62cec2545 267 SUPERFAMILY SSF51621 5 257 6.85E-81 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AM393_RS02555 7da0385ac264dce7058645b62cec2545 267 Gene3D G3DSA:3.20.20.60 1 267 4.2E-55 T 28-03-2018 AM393_RS02555 7da0385ac264dce7058645b62cec2545 267 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 19 244 1.1E-65 T 28-03-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 AM393_RS02555 7da0385ac264dce7058645b62cec2545 267 Hamap MF_01290 2-keto-3-deoxy-L-rhamnonate aldolase [rhmA]. 1 267 66.339 T 28-03-2018 IPR023593 2-keto-3-deoxy-L-rhamnonate aldolase GO:0016832 KEGG: 00051+4.1.2.53|MetaCyc: PWY-6713 AM393_RS02230 d7e6537f294dad752ecb4f725273d84d 564 Gene3D G3DSA:3.40.50.2300 105 202 2.4E-37 T 28-03-2018 AM393_RS02230 d7e6537f294dad752ecb4f725273d84d 564 Gene3D G3DSA:3.40.50.2300 2 84 0.39 T 28-03-2018 AM393_RS02230 d7e6537f294dad752ecb4f725273d84d 564 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 108 194 1.2E-18 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AM393_RS02230 d7e6537f294dad752ecb4f725273d84d 564 SUPERFAMILY SSF52794 105 206 2.27E-35 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AM393_RS02230 d7e6537f294dad752ecb4f725273d84d 564 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 107 190 8.6E-39 T 28-03-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202|KEGG: 00230+2.7.1.20|MetaCyc: PWY-6619 AM393_RS02230 d7e6537f294dad752ecb4f725273d84d 564 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 215 551 3.7E-147 T 28-03-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 AM393_RS02230 d7e6537f294dad752ecb4f725273d84d 564 SUPERFAMILY SSF52794 4 88 4.97E-8 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AM393_RS02230 d7e6537f294dad752ecb4f725273d84d 564 Pfam PF02378 Phosphotransferase system, EIIC 232 495 6.6E-17 T 28-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AM393_RS01900 94a4bc23308fa1aa40c427a0c8ad269a 492 Gene3D G3DSA:3.30.565.10 333 490 1.5E-36 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS01900 94a4bc23308fa1aa40c427a0c8ad269a 492 SMART SM00387 374 486 3.4E-32 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS01900 94a4bc23308fa1aa40c427a0c8ad269a 492 Pfam PF00672 HAMP domain 213 261 1.4E-12 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM393_RS01900 94a4bc23308fa1aa40c427a0c8ad269a 492 SUPERFAMILY SSF47384 248 329 3.53E-14 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM393_RS01900 94a4bc23308fa1aa40c427a0c8ad269a 492 SMART SM00304 212 264 1.2E-14 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM393_RS01900 94a4bc23308fa1aa40c427a0c8ad269a 492 SUPERFAMILY SSF158472 213 261 7.19E-10 T 28-03-2018 AM393_RS01900 94a4bc23308fa1aa40c427a0c8ad269a 492 PRINTS PR00344 Bacterial sensor protein C-terminal signature 470 483 8.6E-10 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM393_RS01900 94a4bc23308fa1aa40c427a0c8ad269a 492 PRINTS PR00344 Bacterial sensor protein C-terminal signature 411 425 8.6E-10 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM393_RS01900 94a4bc23308fa1aa40c427a0c8ad269a 492 PRINTS PR00344 Bacterial sensor protein C-terminal signature 446 464 8.6E-10 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM393_RS01900 94a4bc23308fa1aa40c427a0c8ad269a 492 PRINTS PR00344 Bacterial sensor protein C-terminal signature 429 439 8.6E-10 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM393_RS01900 94a4bc23308fa1aa40c427a0c8ad269a 492 SUPERFAMILY SSF55874 318 484 3.54E-37 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS01900 94a4bc23308fa1aa40c427a0c8ad269a 492 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 374 485 1.2E-18 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS01900 94a4bc23308fa1aa40c427a0c8ad269a 492 Gene3D G3DSA:1.10.287.130 255 324 1.6E-12 T 28-03-2018 AM393_RS01900 94a4bc23308fa1aa40c427a0c8ad269a 492 Pfam PF00512 His Kinase A (phospho-acceptor) domain 265 329 5.8E-12 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM393_RS01900 94a4bc23308fa1aa40c427a0c8ad269a 492 SMART SM00388 265 329 3.3E-14 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM393_RS03470 b0063de5d389926e2b4d5c49d7b8d4eb 63 Pfam PF11119 Protein of unknown function (DUF2633) 9 60 1.4E-28 T 28-03-2018 IPR022576 Protein of unknown function DUF2633 AM393_RS03470 b0063de5d389926e2b4d5c49d7b8d4eb 63 ProDom PD053432 MEMBRANE TRANSMEMBRANE YFGG INNER EXPORTED Y1396 PRECURSOR SIGNAL 1 57 2.0E-22 T 28-03-2018 IPR022576 Protein of unknown function DUF2633 AM393_RS17410 9faaf54affb3f2845e4e9638e1f0be81 339 Pfam PF00356 Bacterial regulatory proteins, lacI family 9 46 1.7E-8 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM393_RS17410 9faaf54affb3f2845e4e9638e1f0be81 339 Gene3D G3DSA:3.40.50.2300 59 168 5.6E-16 T 28-03-2018 AM393_RS17410 9faaf54affb3f2845e4e9638e1f0be81 339 Gene3D G3DSA:3.40.50.2300 169 339 5.7E-20 T 28-03-2018 AM393_RS17410 9faaf54affb3f2845e4e9638e1f0be81 339 Pfam PF13407 Periplasmic binding protein domain 62 315 1.1E-33 T 28-03-2018 IPR025997 Periplasmic binding protein AM393_RS17410 9faaf54affb3f2845e4e9638e1f0be81 339 SUPERFAMILY SSF47413 2 46 2.31E-8 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM393_RS17410 9faaf54affb3f2845e4e9638e1f0be81 339 SMART SM00354 3 56 0.0017 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM393_RS17410 9faaf54affb3f2845e4e9638e1f0be81 339 Gene3D G3DSA:1.10.260.40 3 57 5.8E-11 T 28-03-2018 AM393_RS17410 9faaf54affb3f2845e4e9638e1f0be81 339 SUPERFAMILY SSF53822 58 321 3.73E-35 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AM393_RS26295 78b4fefb91483d9a9475b57bdb8834a4 424 SUPERFAMILY SSF101960 12 421 5.75E-111 T 28-03-2018 AM393_RS26295 78b4fefb91483d9a9475b57bdb8834a4 424 Pfam PF01458 Uncharacterized protein family (UPF0051) 171 394 3.2E-70 T 28-03-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 AM393_RS26295 78b4fefb91483d9a9475b57bdb8834a4 424 TIGRFAM TIGR01981 sufD: FeS assembly protein SufD 133 410 9.8E-86 T 28-03-2018 IPR011542 SUF system FeS cluster assembly, SufD GO:0016226 AM393_RS16665 bba971a3cf326ad3020e35e407a2ab1e 46 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 9 41 7.0E-8 T 28-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS16665 bba971a3cf326ad3020e35e407a2ab1e 46 Pfam PF00444 Ribosomal protein L36 1 41 6.0E-16 T 28-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS16665 bba971a3cf326ad3020e35e407a2ab1e 46 SUPERFAMILY SSF57840 8 41 1.7E-13 T 28-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS16665 bba971a3cf326ad3020e35e407a2ab1e 46 ProSitePatterns PS00828 Ribosomal protein L36 signature. 14 40 - T 28-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS16665 bba971a3cf326ad3020e35e407a2ab1e 46 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 16 41 0.006 T 28-03-2018 AM393_RS16665 bba971a3cf326ad3020e35e407a2ab1e 46 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 41 16.226 T 28-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS25205 6e472cabec7dbae977748cc4f5d9a44c 465 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 9 437 1.3E-165 T 28-03-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 AM393_RS25205 6e472cabec7dbae977748cc4f5d9a44c 465 PIRSF PIRSF006446 2 457 1.2E-222 T 28-03-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 AM393_RS25555 73bc0ed5b1b8e3b4ae9983a72a4c4f85 341 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 1.7E-5 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM393_RS25555 73bc0ed5b1b8e3b4ae9983a72a4c4f85 341 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 1.7E-5 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM393_RS25555 73bc0ed5b1b8e3b4ae9983a72a4c4f85 341 Hamap MF_01277 HTH-type transcriptional repressor PurR [purR]. 1 335 58.633 T 28-03-2018 IPR023588 Transcription regulator HTH, PurR GO:0006355 AM393_RS25555 73bc0ed5b1b8e3b4ae9983a72a4c4f85 341 SUPERFAMILY SSF47413 1 59 1.29E-16 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM393_RS25555 73bc0ed5b1b8e3b4ae9983a72a4c4f85 341 Gene3D G3DSA:3.40.50.2300 55 176 1.6E-29 T 28-03-2018 AM393_RS25555 73bc0ed5b1b8e3b4ae9983a72a4c4f85 341 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 28-03-2018 AM393_RS25555 73bc0ed5b1b8e3b4ae9983a72a4c4f85 341 SUPERFAMILY SSF53822 60 338 5.69E-94 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AM393_RS25555 73bc0ed5b1b8e3b4ae9983a72a4c4f85 341 Pfam PF13377 Periplasmic binding protein-like domain 171 331 2.2E-40 T 28-03-2018 AM393_RS25555 73bc0ed5b1b8e3b4ae9983a72a4c4f85 341 Gene3D G3DSA:3.40.50.2300 177 308 4.6E-48 T 28-03-2018 AM393_RS25555 73bc0ed5b1b8e3b4ae9983a72a4c4f85 341 Gene3D G3DSA:1.10.260.40 2 54 9.4E-20 T 28-03-2018 AM393_RS25555 73bc0ed5b1b8e3b4ae9983a72a4c4f85 341 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 5.4E-19 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM393_RS25555 73bc0ed5b1b8e3b4ae9983a72a4c4f85 341 SMART SM00354 1 71 3.0E-37 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM393_RS11645 837e7f6a1f136478e47137c20cb68f27 316 PIRSF PIRSF000545 1 316 5.3E-149 T 28-03-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 AM393_RS11645 837e7f6a1f136478e47137c20cb68f27 316 Gene3D G3DSA:3.40.50.300 9 316 4.2E-54 T 28-03-2018 AM393_RS11645 837e7f6a1f136478e47137c20cb68f27 316 SUPERFAMILY SSF52540 10 315 3.22E-79 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS11645 837e7f6a1f136478e47137c20cb68f27 316 TIGRFAM TIGR00554 panK_bact: pantothenate kinase 10 316 3.0E-174 T 28-03-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 AM393_RS11645 837e7f6a1f136478e47137c20cb68f27 316 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 90 245 2.2E-13 T 28-03-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 Reactome: R-HSA-73614 AM393_RS11645 837e7f6a1f136478e47137c20cb68f27 316 Hamap MF_00215 Pantothenate kinase [coaA]. 1 316 189.628 T 28-03-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 AM393_RS10410 6fdfaa77d40e9bfdb3f4f2258bc47b63 319 Hamap MF_01607 HTH-type transcriptional regulator YidZ [yidZ]. 1 319 71.656 T 28-03-2018 IPR023746 Transcription regulator HTH, YidZ GO:0003700|GO:0006355 AM393_RS10410 6fdfaa77d40e9bfdb3f4f2258bc47b63 319 Gene3D G3DSA:3.40.190.10 195 282 2.8E-11 T 28-03-2018 AM393_RS10410 6fdfaa77d40e9bfdb3f4f2258bc47b63 319 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 66 5.0E-12 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS10410 6fdfaa77d40e9bfdb3f4f2258bc47b63 319 SUPERFAMILY SSF46785 7 86 1.44E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS10410 6fdfaa77d40e9bfdb3f4f2258bc47b63 319 Pfam PF03466 LysR substrate binding domain 114 313 4.6E-13 T 28-03-2018 IPR005119 LysR, substrate-binding AM393_RS10410 6fdfaa77d40e9bfdb3f4f2258bc47b63 319 Gene3D G3DSA:3.40.190.10 98 194 1.2E-6 T 28-03-2018 AM393_RS10410 6fdfaa77d40e9bfdb3f4f2258bc47b63 319 Gene3D G3DSA:1.10.10.10 2 90 8.6E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS10410 6fdfaa77d40e9bfdb3f4f2258bc47b63 319 SUPERFAMILY SSF53850 97 313 4.19E-24 T 28-03-2018 AM393_RS24850 c380883d14262950e746c8bb7835e4bc 108 Gene3D G3DSA:2.30.30.110 5 106 8.1E-15 T 28-03-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor AM393_RS24850 c380883d14262950e746c8bb7835e4bc 108 SUPERFAMILY SSF50118 5 106 1.37E-14 T 28-03-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor AM393_RS24850 c380883d14262950e746c8bb7835e4bc 108 Pfam PF01845 CcdB protein 5 106 1.7E-27 T 28-03-2018 IPR002712 Toxin CcdB GO:0006276|GO:0008657 AM393_RS24850 c380883d14262950e746c8bb7835e4bc 108 ProDom PD012578 PLASMID TOXIN CCDB CYTOTOXIC LETB POST-SEGREGATION SYSTEM CCDB-LIKE GYRASE FUSED-CCDB 21 107 9.0E-4 T 28-03-2018 IPR002712 Toxin CcdB GO:0006276|GO:0008657 AM393_RS08085 b543f3e1c76048af21b7b6b40665a600 1036 Gene3D G3DSA:3.30.70.1430 567 668 1.2E-21 T 28-03-2018 AM393_RS08085 b543f3e1c76048af21b7b6b40665a600 1036 Gene3D G3DSA:3.30.2090.10 180 275 7.5E-16 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM393_RS08085 b543f3e1c76048af21b7b6b40665a600 1036 SUPERFAMILY SSF82866 296 497 2.09E-48 T 28-03-2018 AM393_RS08085 b543f3e1c76048af21b7b6b40665a600 1036 Gene3D G3DSA:1.20.1640.10 287 510 2.9E-45 T 28-03-2018 AM393_RS08085 b543f3e1c76048af21b7b6b40665a600 1036 Gene3D G3DSA:3.30.2090.10 722 810 8.2E-19 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM393_RS08085 b543f3e1c76048af21b7b6b40665a600 1036 SUPERFAMILY SSF82714 182 271 3.66E-20 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM393_RS08085 b543f3e1c76048af21b7b6b40665a600 1036 SUPERFAMILY SSF82866 838 1028 1.83E-44 T 28-03-2018 AM393_RS08085 b543f3e1c76048af21b7b6b40665a600 1036 Gene3D G3DSA:1.20.1640.10 827 1031 7.4E-38 T 28-03-2018 AM393_RS08085 b543f3e1c76048af21b7b6b40665a600 1036 SUPERFAMILY SSF82693 565 669 1.1E-32 T 28-03-2018 AM393_RS08085 b543f3e1c76048af21b7b6b40665a600 1036 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 1.3E-112 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS08085 b543f3e1c76048af21b7b6b40665a600 1036 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 1.3E-112 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS08085 b543f3e1c76048af21b7b6b40665a600 1036 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 1.3E-112 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS08085 b543f3e1c76048af21b7b6b40665a600 1036 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 1.3E-112 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS08085 b543f3e1c76048af21b7b6b40665a600 1036 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 1.3E-112 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS08085 b543f3e1c76048af21b7b6b40665a600 1036 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 1.3E-112 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS08085 b543f3e1c76048af21b7b6b40665a600 1036 PRINTS PR00702 Acriflavin resistance protein family signature 621 635 1.3E-112 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS08085 b543f3e1c76048af21b7b6b40665a600 1036 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 1.3E-112 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS08085 b543f3e1c76048af21b7b6b40665a600 1036 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 1.3E-112 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS08085 b543f3e1c76048af21b7b6b40665a600 1036 SUPERFAMILY SSF82693 136 182 5.49E-28 T 28-03-2018 AM393_RS08085 b543f3e1c76048af21b7b6b40665a600 1036 SUPERFAMILY SSF82693 274 330 5.49E-28 T 28-03-2018 AM393_RS08085 b543f3e1c76048af21b7b6b40665a600 1036 Pfam PF00873 AcrB/AcrD/AcrF family 1 1028 0.0 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS08085 b543f3e1c76048af21b7b6b40665a600 1036 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1034 0.0 T 28-03-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 AM393_RS08085 b543f3e1c76048af21b7b6b40665a600 1036 SUPERFAMILY SSF82693 38 132 1.43E-28 T 28-03-2018 AM393_RS08085 b543f3e1c76048af21b7b6b40665a600 1036 Gene3D G3DSA:3.30.70.1430 38 140 2.8E-30 T 28-03-2018 AM393_RS08085 b543f3e1c76048af21b7b6b40665a600 1036 SUPERFAMILY SSF82693 672 722 3.14E-25 T 28-03-2018 AM393_RS08085 b543f3e1c76048af21b7b6b40665a600 1036 SUPERFAMILY SSF82693 809 857 3.14E-25 T 28-03-2018 AM393_RS08085 b543f3e1c76048af21b7b6b40665a600 1036 SUPERFAMILY SSF82714 723 809 3.92E-23 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM393_RS07180 398960c84d4c7b6c496925844f703e0c 415 SUPERFAMILY SSF118215 19 400 7.45E-95 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM393_RS07180 398960c84d4c7b6c496925844f703e0c 415 PRINTS PR00173 Glutamate-aspartate symporter signature 326 345 6.6E-14 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM393_RS07180 398960c84d4c7b6c496925844f703e0c 415 PRINTS PR00173 Glutamate-aspartate symporter signature 13 33 6.6E-14 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM393_RS07180 398960c84d4c7b6c496925844f703e0c 415 PRINTS PR00173 Glutamate-aspartate symporter signature 291 317 6.6E-14 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM393_RS07180 398960c84d4c7b6c496925844f703e0c 415 PRINTS PR00173 Glutamate-aspartate symporter signature 353 373 6.6E-14 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM393_RS07180 398960c84d4c7b6c496925844f703e0c 415 PRINTS PR00173 Glutamate-aspartate symporter signature 189 208 6.6E-14 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM393_RS07180 398960c84d4c7b6c496925844f703e0c 415 Hamap MF_01582 Serine/threonine transporter SstT [sstT]. 7 408 35.954 T 28-03-2018 IPR023025 Serine/threonine transporter SstT GO:0015293|GO:0015826|GO:0032329 AM393_RS07180 398960c84d4c7b6c496925844f703e0c 415 Gene3D G3DSA:1.10.3860.10 10 407 2.0E-73 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM393_RS07180 398960c84d4c7b6c496925844f703e0c 415 Pfam PF00375 Sodium:dicarboxylate symporter family 19 398 3.7E-63 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM393_RS05160 5adb2e9fbe1e3aa9e545c4cce1445b6e 93 Hamap MF_00330 Cobalt transport protein CbiN [cbiN]. 1 93 44.73 T 28-03-2018 IPR003705 Cobalt transport protein CbiN GO:0006824|GO:0009236|GO:0015087|GO:0016020 AM393_RS05160 5adb2e9fbe1e3aa9e545c4cce1445b6e 93 Pfam PF02553 Cobalt transport protein component CbiN 5 69 9.0E-29 T 28-03-2018 IPR003705 Cobalt transport protein CbiN GO:0006824|GO:0009236|GO:0015087|GO:0016020 AM393_RS05160 5adb2e9fbe1e3aa9e545c4cce1445b6e 93 TIGRFAM TIGR01165 cbiN: cobalt transport protein 1 85 1.8E-38 T 28-03-2018 IPR003705 Cobalt transport protein CbiN GO:0006824|GO:0009236|GO:0015087|GO:0016020 AM393_RS03005 745a99ae356b785a91398184781589bb 321 SUPERFAMILY SSF53067 4 318 4.37E-61 T 28-03-2018 AM393_RS03005 745a99ae356b785a91398184781589bb 321 Hamap MF_00524 Glucokinase [glk]. 4 316 35.541 T 28-03-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 AM393_RS03005 745a99ae356b785a91398184781589bb 321 TIGRFAM TIGR00749 glk: glucokinase 6 310 6.4E-148 T 28-03-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 AM393_RS03005 745a99ae356b785a91398184781589bb 321 Gene3D G3DSA:3.30.420.40 1 109 4.4E-15 T 28-03-2018 AM393_RS03005 745a99ae356b785a91398184781589bb 321 Pfam PF02685 Glucokinase 6 315 1.7E-121 T 28-03-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 AM393_RS03005 745a99ae356b785a91398184781589bb 321 Gene3D G3DSA:3.40.367.20 110 299 2.6E-31 T 28-03-2018 AM393_RS18080 da1e37f02498f9faab9e043abaaf811e 500 Gene3D G3DSA:3.40.50.300 258 498 4.7E-33 T 28-03-2018 AM393_RS18080 da1e37f02498f9faab9e043abaaf811e 500 SUPERFAMILY SSF52540 268 487 9.52E-40 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS18080 da1e37f02498f9faab9e043abaaf811e 500 SUPERFAMILY SSF52540 5 231 7.73E-52 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS18080 da1e37f02498f9faab9e043abaaf811e 500 Gene3D G3DSA:3.40.50.300 2 238 8.4E-49 T 28-03-2018 AM393_RS18080 da1e37f02498f9faab9e043abaaf811e 500 SMART SM00382 30 228 6.6E-6 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS18080 da1e37f02498f9faab9e043abaaf811e 500 SMART SM00382 281 482 2.5E-5 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS18080 da1e37f02498f9faab9e043abaaf811e 500 Pfam PF00005 ABC transporter 21 172 3.3E-22 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS18080 da1e37f02498f9faab9e043abaaf811e 500 Pfam PF00005 ABC transporter 272 426 3.9E-18 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS18080 da1e37f02498f9faab9e043abaaf811e 500 ProSitePatterns PS00211 ABC transporters family signature. 399 413 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS25680 0568b3226eac15134c4a5814fa3a6cac 319 Gene3D G3DSA:1.10.3720.10 1 305 5.3E-44 T 28-03-2018 AM393_RS25680 0568b3226eac15134c4a5814fa3a6cac 319 SUPERFAMILY SSF161098 88 299 6.35E-17 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS25680 0568b3226eac15134c4a5814fa3a6cac 319 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 111 316 4.7E-42 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS10580 d1b4f6324ecaa13937e262deaf1416a3 139 SUPERFAMILY SSF102546 1 139 2.22E-44 T 28-03-2018 IPR023750 RbsD-like domain GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 AM393_RS10580 d1b4f6324ecaa13937e262deaf1416a3 139 Gene3D G3DSA:3.40.1650.10 1 139 8.4E-40 T 28-03-2018 IPR023750 RbsD-like domain GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 AM393_RS10580 d1b4f6324ecaa13937e262deaf1416a3 139 Pfam PF05025 RbsD / FucU transport protein family 1 138 1.6E-47 T 28-03-2018 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 AM393_RS10580 d1b4f6324ecaa13937e262deaf1416a3 139 Hamap MF_01661 D-ribose pyranase [rbsD]. 1 139 33.081 T 28-03-2018 IPR023064 D-ribose pyranase GO:0016872 AM393_RS22325 f58e09d1bba09693671f53e8dfb97b88 884 SUPERFAMILY SSF81923 13 124 6.15E-20 T 28-03-2018 IPR004176 Clp, N-terminal GO:0019538 AM393_RS22325 f58e09d1bba09693671f53e8dfb97b88 884 Pfam PF07724 AAA domain (Cdc48 subfamily) 610 775 4.4E-38 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AM393_RS22325 f58e09d1bba09693671f53e8dfb97b88 884 SMART SM00382 233 378 6.5E-13 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS22325 f58e09d1bba09693671f53e8dfb97b88 884 SMART SM00382 610 783 8.6E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS22325 f58e09d1bba09693671f53e8dfb97b88 884 SMART SM01086 781 873 3.3E-9 T 28-03-2018 IPR019489 Clp ATPase, C-terminal AM393_RS22325 f58e09d1bba09693671f53e8dfb97b88 884 Gene3D G3DSA:3.40.50.300 192 377 5.0E-23 T 28-03-2018 AM393_RS22325 f58e09d1bba09693671f53e8dfb97b88 884 Gene3D G3DSA:1.10.8.60 781 880 2.3E-11 T 28-03-2018 AM393_RS22325 f58e09d1bba09693671f53e8dfb97b88 884 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 238 350 1.3E-9 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AM393_RS22325 f58e09d1bba09693671f53e8dfb97b88 884 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 614 632 1.3E-31 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 AM393_RS22325 f58e09d1bba09693671f53e8dfb97b88 884 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 688 706 1.3E-31 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 AM393_RS22325 f58e09d1bba09693671f53e8dfb97b88 884 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 659 677 1.3E-31 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 AM393_RS22325 f58e09d1bba09693671f53e8dfb97b88 884 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 721 735 1.3E-31 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 AM393_RS22325 f58e09d1bba09693671f53e8dfb97b88 884 Gene3D G3DSA:3.40.50.300 565 780 1.9E-37 T 28-03-2018 AM393_RS22325 f58e09d1bba09693671f53e8dfb97b88 884 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 784 855 1.1E-11 T 28-03-2018 IPR019489 Clp ATPase, C-terminal AM393_RS22325 f58e09d1bba09693671f53e8dfb97b88 884 Gene3D G3DSA:1.10.1780.10 1 159 3.0E-30 T 28-03-2018 IPR004176 Clp, N-terminal GO:0019538 AM393_RS22325 f58e09d1bba09693671f53e8dfb97b88 884 Gene3D G3DSA:1.10.8.60 379 560 8.5E-37 T 28-03-2018 AM393_RS22325 f58e09d1bba09693671f53e8dfb97b88 884 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 329 341 - T 28-03-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 AM393_RS22325 f58e09d1bba09693671f53e8dfb97b88 884 SUPERFAMILY SSF52540 194 518 7.18E-69 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS22325 f58e09d1bba09693671f53e8dfb97b88 884 SUPERFAMILY SSF52540 559 852 5.48E-63 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS22325 f58e09d1bba09693671f53e8dfb97b88 884 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 22 65 0.011 T 28-03-2018 IPR004176 Clp, N-terminal GO:0019538 AM393_RS22325 f58e09d1bba09693671f53e8dfb97b88 884 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 11 864 0.0 T 28-03-2018 IPR017729 Type VI secretion system, ATPase ClpV1 AM393_RS05150 83aea40c1d5b54784184e25e0dcfeb89 274 Pfam PF00005 ABC transporter 17 165 2.0E-29 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS05150 83aea40c1d5b54784184e25e0dcfeb89 274 SMART SM00382 26 212 1.0E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS05150 83aea40c1d5b54784184e25e0dcfeb89 274 TIGRFAM TIGR01166 cbiO: cobalt ABC transporter, ATP-binding protein 11 199 3.9E-86 T 28-03-2018 IPR005876 Cobalt transport protein ATP-binding subunit GO:0006824 AM393_RS05150 83aea40c1d5b54784184e25e0dcfeb89 274 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS05150 83aea40c1d5b54784184e25e0dcfeb89 274 Gene3D G3DSA:3.40.50.300 1 238 2.3E-59 T 28-03-2018 AM393_RS05150 83aea40c1d5b54784184e25e0dcfeb89 274 SUPERFAMILY SSF52540 3 230 2.13E-55 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS20155 3bb459d421ed857cdb13f1d34669ccb8 180 Pfam PF07126 Cell-division protein ZapC 3 170 1.1E-68 T 28-03-2018 IPR009809 Cell division protein ZapC AM393_RS20155 3bb459d421ed857cdb13f1d34669ccb8 180 PIRSF PIRSF010252 1 178 4.1E-63 T 28-03-2018 IPR009809 Cell division protein ZapC AM393_RS20155 3bb459d421ed857cdb13f1d34669ccb8 180 Hamap MF_00906 Cell division protein ZapC [zapC]. 2 178 40.475 T 28-03-2018 IPR009809 Cell division protein ZapC AM393_RS17870 dc6454a10fb51c4992c2759e6ff652a3 554 Pfam PF00732 GMC oxidoreductase 3 300 1.1E-103 T 28-03-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AM393_RS17870 dc6454a10fb51c4992c2759e6ff652a3 554 SUPERFAMILY SSF51905 2 293 1.02E-87 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS17870 dc6454a10fb51c4992c2759e6ff652a3 554 SUPERFAMILY SSF51905 476 535 1.02E-87 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS17870 dc6454a10fb51c4992c2759e6ff652a3 554 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 82 105 - T 28-03-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AM393_RS17870 dc6454a10fb51c4992c2759e6ff652a3 554 PIRSF PIRSF000137 1 538 3.7E-139 T 28-03-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AM393_RS17870 dc6454a10fb51c4992c2759e6ff652a3 554 TIGRFAM TIGR01810 betA: choline dehydrogenase 4 537 7.3E-302 T 28-03-2018 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494 AM393_RS17870 dc6454a10fb51c4992c2759e6ff652a3 554 Pfam PF05199 GMC oxidoreductase 393 527 6.3E-42 T 28-03-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 AM393_RS17870 dc6454a10fb51c4992c2759e6ff652a3 554 Hamap MF_00750 Oxygen-dependent choline dehydrogenase [betA]. 1 554 61.047 T 28-03-2018 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494 AM393_RS17870 dc6454a10fb51c4992c2759e6ff652a3 554 Gene3D G3DSA:4.10.450.10 38 102 7.0E-25 T 28-03-2018 AM393_RS17870 dc6454a10fb51c4992c2759e6ff652a3 554 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 259 273 - T 28-03-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AM393_RS17870 dc6454a10fb51c4992c2759e6ff652a3 554 SUPERFAMILY SSF54373 295 477 5.98E-67 T 28-03-2018 AM393_RS17870 dc6454a10fb51c4992c2759e6ff652a3 554 Gene3D G3DSA:3.30.560.10 103 490 8.6E-102 T 28-03-2018 AM393_RS06045 b6f642f45b47896f5ea174298b6d8f90 489 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 276 287 - T 28-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 AM393_RS06045 b6f642f45b47896f5ea174298b6d8f90 489 SUPERFAMILY SSF53720 4 479 2.62E-158 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AM393_RS06045 b6f642f45b47896f5ea174298b6d8f90 489 Pfam PF00171 Aldehyde dehydrogenase family 18 476 2.1E-164 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AM393_RS06045 b6f642f45b47896f5ea174298b6d8f90 489 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 248 255 - T 28-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 AM393_RS06045 b6f642f45b47896f5ea174298b6d8f90 489 Gene3D G3DSA:3.40.309.10 267 462 2.7E-69 T 28-03-2018 AM393_RS06045 b6f642f45b47896f5ea174298b6d8f90 489 Gene3D G3DSA:3.40.605.10 1 266 1.8E-89 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AM393_RS25400 8dad27d004d6d253123ed06d52e003d7 753 Pfam PF12838 4Fe-4S dicluster domain 377 430 2.4E-8 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM393_RS25400 8dad27d004d6d253123ed06d52e003d7 753 Pfam PF10531 SLBB domain 296 344 7.3E-13 T 28-03-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM393_RS25400 8dad27d004d6d253123ed06d52e003d7 753 Gene3D G3DSA:3.30.70.20 387 485 1.1E-16 T 28-03-2018 AM393_RS25400 8dad27d004d6d253123ed06d52e003d7 753 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 416 427 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM393_RS25400 8dad27d004d6d253123ed06d52e003d7 753 TIGRFAM TIGR01945 rnfC: electron transport complex, RnfABCDGE type, C subunit 13 445 6.2E-180 T 28-03-2018 IPR010208 Electron transport complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 AM393_RS25400 8dad27d004d6d253123ed06d52e003d7 753 Gene3D G3DSA:1.10.1060.10 355 386 0.045 T 28-03-2018 AM393_RS25400 8dad27d004d6d253123ed06d52e003d7 753 SUPERFAMILY SSF46548 336 444 1.92E-19 T 28-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AM393_RS25400 8dad27d004d6d253123ed06d52e003d7 753 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 139 283 4.5E-46 T 28-03-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM393_RS25400 8dad27d004d6d253123ed06d52e003d7 753 Pfam PF13375 RnfC Barrel sandwich hybrid domain 14 115 9.5E-33 T 28-03-2018 IPR026902 RnfC Barrel sandwich hybrid domain AM393_RS25400 8dad27d004d6d253123ed06d52e003d7 753 SUPERFAMILY SSF142019 94 303 1.57E-60 T 28-03-2018 AM393_RS25400 8dad27d004d6d253123ed06d52e003d7 753 Hamap MF_00461 Electron transport complex subunit RsxC [rsxC]. 1 723 268.702 T 28-03-2018 IPR010208 Electron transport complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 AM393_RS24100 0b021866c650ca43326f108921652a0b 290 Hamap MF_01987 Ribokinase [rbsK]. 1 283 18.493 T 28-03-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 AM393_RS24100 0b021866c650ca43326f108921652a0b 290 Gene3D G3DSA:3.40.1190.20 1 290 5.0E-64 T 28-03-2018 IPR029056 Ribokinase-like AM393_RS24100 0b021866c650ca43326f108921652a0b 290 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 37 61 - T 28-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AM393_RS24100 0b021866c650ca43326f108921652a0b 290 Pfam PF00294 pfkB family carbohydrate kinase 23 272 1.0E-36 T 28-03-2018 IPR011611 Carbohydrate kinase PfkB AM393_RS24100 0b021866c650ca43326f108921652a0b 290 PRINTS PR00990 Ribokinase signature 5 26 3.6E-17 T 28-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AM393_RS24100 0b021866c650ca43326f108921652a0b 290 PRINTS PR00990 Ribokinase signature 197 208 3.6E-17 T 28-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AM393_RS24100 0b021866c650ca43326f108921652a0b 290 PRINTS PR00990 Ribokinase signature 103 116 3.6E-17 T 28-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AM393_RS24100 0b021866c650ca43326f108921652a0b 290 PRINTS PR00990 Ribokinase signature 171 186 3.6E-17 T 28-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AM393_RS24100 0b021866c650ca43326f108921652a0b 290 PRINTS PR00990 Ribokinase signature 32 51 3.6E-17 T 28-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AM393_RS24100 0b021866c650ca43326f108921652a0b 290 SUPERFAMILY SSF53613 1 284 3.9E-56 T 28-03-2018 IPR029056 Ribokinase-like AM393_RS08585 793c76123e0bd90b49732e8d22a24d54 852 Pfam PF00912 Transglycosylase 55 229 5.3E-65 T 28-03-2018 IPR001264 Glycosyl transferase, family 51 AM393_RS08585 793c76123e0bd90b49732e8d22a24d54 852 Gene3D G3DSA:1.10.3810.10 47 246 5.0E-84 T 28-03-2018 IPR001264 Glycosyl transferase, family 51 AM393_RS08585 793c76123e0bd90b49732e8d22a24d54 852 SUPERFAMILY SSF56601 422 610 6.02E-110 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AM393_RS08585 793c76123e0bd90b49732e8d22a24d54 852 SUPERFAMILY SSF56601 211 233 6.02E-110 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AM393_RS08585 793c76123e0bd90b49732e8d22a24d54 852 SUPERFAMILY SSF56601 262 313 6.02E-110 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AM393_RS08585 793c76123e0bd90b49732e8d22a24d54 852 SUPERFAMILY SSF56601 673 832 6.02E-110 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AM393_RS08585 793c76123e0bd90b49732e8d22a24d54 852 SUPERFAMILY SSF53955 43 257 8.15E-81 T 28-03-2018 IPR023346 Lysozyme-like domain AM393_RS08585 793c76123e0bd90b49732e8d22a24d54 852 Gene3D G3DSA:3.40.710.10 410 800 1.4E-91 T 28-03-2018 AM393_RS08585 793c76123e0bd90b49732e8d22a24d54 852 Pfam PF00905 Penicillin binding protein transpeptidase domain 429 603 4.0E-23 T 28-03-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AM393_RS08585 793c76123e0bd90b49732e8d22a24d54 852 Gene3D G3DSA:2.40.50.140 348 409 1.4E-22 T 28-03-2018 AM393_RS08585 793c76123e0bd90b49732e8d22a24d54 852 Pfam PF17092 Penicillin-binding protein OB-like domain 316 425 3.8E-29 T 28-03-2018 IPR031376 Penicillin-binding protein, OB-like domain AM393_RS08585 793c76123e0bd90b49732e8d22a24d54 852 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 65 786 9.9E-174 T 28-03-2018 AM393_RS04175 cc74c9c8efeed5fde2546e0e8cd0d128 851 SUPERFAMILY SSF141729 71 183 1.44E-31 T 28-03-2018 AM393_RS04175 cc74c9c8efeed5fde2546e0e8cd0d128 851 Pfam PF13953 PapC C-terminal domain 762 831 1.1E-17 T 28-03-2018 IPR025949 PapC-like, C-terminal domain AM393_RS04175 cc74c9c8efeed5fde2546e0e8cd0d128 851 Pfam PF00577 Outer membrane usher protein 208 752 2.5E-183 T 28-03-2018 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 AM393_RS04175 cc74c9c8efeed5fde2546e0e8cd0d128 851 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 319 329 - T 28-03-2018 IPR018030 Fimbrial membrane usher, conserved site AM393_RS04175 cc74c9c8efeed5fde2546e0e8cd0d128 851 Pfam PF13954 PapC N-terminal domain 46 191 3.8E-41 T 28-03-2018 IPR025885 PapC, N-terminal domain GO:0005515 AM393_RS18835 e5717037595d303a88d617c1efabb862 348 TIGRFAM TIGR00209 galT_1: galactose-1-phosphate uridylyltransferase 2 347 9.5E-208 T 28-03-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-70370 AM393_RS18835 e5717037595d303a88d617c1efabb862 348 PIRSF PIRSF000808 1 341 1.6E-129 T 28-03-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-70370 AM393_RS18835 e5717037595d303a88d617c1efabb862 348 Pfam PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain 183 345 5.5E-71 T 28-03-2018 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-70370 AM393_RS18835 e5717037595d303a88d617c1efabb862 348 Pfam PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain 5 176 4.1E-71 T 28-03-2018 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-70370 AM393_RS18835 e5717037595d303a88d617c1efabb862 348 ProSitePatterns PS00117 Galactose-1-phosphate uridyl transferase family 1 active site signature. 151 168 - T 28-03-2018 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-70370 AM393_RS18835 e5717037595d303a88d617c1efabb862 348 SUPERFAMILY SSF54197 179 345 2.94E-57 T 28-03-2018 IPR011146 HIT-like domain GO:0003824 AM393_RS18835 e5717037595d303a88d617c1efabb862 348 Gene3D G3DSA:3.30.428.10 165 345 1.7E-58 T 28-03-2018 IPR011146 HIT-like domain GO:0003824 AM393_RS18835 e5717037595d303a88d617c1efabb862 348 Gene3D G3DSA:3.30.428.10 45 164 9.7E-52 T 28-03-2018 IPR011146 HIT-like domain GO:0003824 AM393_RS18835 e5717037595d303a88d617c1efabb862 348 SUPERFAMILY SSF54197 4 177 1.45E-74 T 28-03-2018 IPR011146 HIT-like domain GO:0003824 AM393_RS18465 1e6fa4b2c217d4276163c900b4d7c0de 554 Gene3D G3DSA:3.60.20.10 2 193 1.8E-49 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AM393_RS18465 1e6fa4b2c217d4276163c900b4d7c0de 554 SUPERFAMILY SSF56235 1 196 1.54E-57 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AM393_RS18465 1e6fa4b2c217d4276163c900b4d7c0de 554 PIRSF PIRSF001589 1 368 5.3E-111 T 28-03-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 AM393_RS18465 1e6fa4b2c217d4276163c900b4d7c0de 554 PIRSF PIRSF001589 361 507 6.7E-29 T 28-03-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 AM393_RS18465 1e6fa4b2c217d4276163c900b4d7c0de 554 Pfam PF13537 Glutamine amidotransferase domain 48 165 3.3E-42 T 28-03-2018 IPR017932 Glutamine amidotransferase type 2 domain AM393_RS18465 1e6fa4b2c217d4276163c900b4d7c0de 554 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 373 4.3E-126 T 28-03-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 AM393_RS18465 1e6fa4b2c217d4276163c900b4d7c0de 554 SUPERFAMILY SSF52402 210 479 1.23E-75 T 28-03-2018 AM393_RS18465 1e6fa4b2c217d4276163c900b4d7c0de 554 Pfam PF00733 Asparagine synthase 211 366 6.3E-60 T 28-03-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 AM393_RS18465 1e6fa4b2c217d4276163c900b4d7c0de 554 Gene3D G3DSA:3.40.50.620 194 514 1.4E-90 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM393_RS20465 17b3365f2a9bda64480e80c2a1732451 363 Gene3D G3DSA:3.20.20.30 1 361 7.4E-68 T 28-03-2018 AM393_RS20465 17b3365f2a9bda64480e80c2a1732451 363 TIGRFAM TIGR03612 RutA: pyrimidine utilization protein A 1 355 1.5E-218 T 28-03-2018 IPR019914 Pyrimidine monooxygenase RutA GO:0004497|GO:0006212|GO:0055114 KEGG: 00240+1.14.99.46 AM393_RS20465 17b3365f2a9bda64480e80c2a1732451 363 Hamap MF_01699 Pyrimidine monooxygenase RutA [rutA]. 1 360 70.734 T 28-03-2018 IPR019914 Pyrimidine monooxygenase RutA GO:0004497|GO:0006212|GO:0055114 KEGG: 00240+1.14.99.46 AM393_RS20465 17b3365f2a9bda64480e80c2a1732451 363 SUPERFAMILY SSF51679 1 352 1.77E-80 T 28-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AM393_RS20465 17b3365f2a9bda64480e80c2a1732451 363 Pfam PF00296 Luciferase-like monooxygenase 1 320 2.2E-69 T 28-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AM393_RS10305 71604c940e650aa08cda6c61660909eb 406 Gene3D G3DSA:2.140.10.30 2 403 2.9E-21 T 28-03-2018 AM393_RS10305 71604c940e650aa08cda6c61660909eb 406 Pfam PF12566 Protein of unknown function (DUF3748) 63 179 2.7E-54 T 28-03-2018 IPR022223 Protein of unknown function DUF3748 AM393_RS10305 71604c940e650aa08cda6c61660909eb 406 Pfam PF07676 WD40-like Beta Propeller Repeat 375 401 9.8E-4 T 28-03-2018 IPR011659 WD40-like Beta Propeller AM393_RS10305 71604c940e650aa08cda6c61660909eb 406 SUPERFAMILY SSF82171 18 145 1.77E-19 T 28-03-2018 AM393_RS10305 71604c940e650aa08cda6c61660909eb 406 SUPERFAMILY SSF82171 266 401 1.77E-19 T 28-03-2018 AM393_RS10305 71604c940e650aa08cda6c61660909eb 406 SUPERFAMILY SSF82171 228 239 1.77E-19 T 28-03-2018 AM393_RS19625 65fae2a65a39d181717a07bb3bf4316b 171 Pfam PF04985 Phage tail tube protein FII 4 170 5.9E-60 T 28-03-2018 IPR006498 Tail tube protein AM393_RS19625 65fae2a65a39d181717a07bb3bf4316b 171 TIGRFAM TIGR01611 tail_tube: phage major tail tube protein 3 171 1.6E-48 T 28-03-2018 IPR006498 Tail tube protein AM393_RS25115 682918f8ae1b93a3fcf09872de281dcc 193 SUPERFAMILY SSF47413 8 74 2.95E-17 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM393_RS25115 682918f8ae1b93a3fcf09872de281dcc 193 Gene3D G3DSA:1.10.260.40 1 74 9.1E-18 T 28-03-2018 AM393_RS25115 682918f8ae1b93a3fcf09872de281dcc 193 SUPERFAMILY SSF51182 55 187 4.63E-16 T 28-03-2018 IPR011051 RmlC-like cupin domain AM393_RS25115 682918f8ae1b93a3fcf09872de281dcc 193 Pfam PF01381 Helix-turn-helix 16 69 8.4E-13 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM393_RS25115 682918f8ae1b93a3fcf09872de281dcc 193 SMART SM00530 15 70 4.3E-15 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM393_RS25115 682918f8ae1b93a3fcf09872de281dcc 193 Gene3D G3DSA:2.60.120.10 75 192 1.5E-11 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AM393_RS03990 324d350442e5a49c1a08d7cd984b595d 82 Gene3D G3DSA:3.30.1320.10 1 79 3.1E-33 T 28-03-2018 IPR023803 Ribosomal protein S16 domain Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS03990 324d350442e5a49c1a08d7cd984b595d 82 ProSitePatterns PS00732 Ribosomal protein S16 signature. 2 11 - T 28-03-2018 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM393_RS03990 324d350442e5a49c1a08d7cd984b595d 82 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 79 1.9E-28 T 28-03-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS03990 324d350442e5a49c1a08d7cd984b595d 82 Pfam PF00886 Ribosomal protein S16 8 68 2.3E-24 T 28-03-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS03990 324d350442e5a49c1a08d7cd984b595d 82 SUPERFAMILY SSF54565 1 79 1.57E-29 T 28-03-2018 IPR023803 Ribosomal protein S16 domain Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS03990 324d350442e5a49c1a08d7cd984b595d 82 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 24.134 T 28-03-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS03945 2868911d9d85f00b2f14bed4fae09ea3 356 SUPERFAMILY SSF51569 8 345 1.57E-135 T 28-03-2018 AM393_RS03945 2868911d9d85f00b2f14bed4fae09ea3 356 PIRSF PIRSF001361 1 354 3.0E-164 T 28-03-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 AM393_RS03945 2868911d9d85f00b2f14bed4fae09ea3 356 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 9 349 8.3E-173 T 28-03-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 AM393_RS03945 2868911d9d85f00b2f14bed4fae09ea3 356 Gene3D G3DSA:3.20.20.70 9 355 1.8E-129 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM393_RS03945 2868911d9d85f00b2f14bed4fae09ea3 356 Pfam PF00793 DAHP synthetase I family 38 340 2.5E-107 T 28-03-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AM393_RS14200 80514da598a2f9f024e9acb69c4021b1 357 Pfam PF01734 Patatin-like phospholipase 27 195 8.7E-19 T 28-03-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 AM393_RS14200 80514da598a2f9f024e9acb69c4021b1 357 SUPERFAMILY SSF52151 21 279 1.28E-42 T 28-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 AM393_RS14200 80514da598a2f9f024e9acb69c4021b1 357 Gene3D G3DSA:3.40.1090.10 17 279 6.2E-31 T 28-03-2018 AM393_RS15165 908dccceeefbc91589e601ed60eb9f62 198 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site AM393_RS15165 908dccceeefbc91589e601ed60eb9f62 198 Gene3D G3DSA:2.10.70.20 148 198 1.3E-17 T 28-03-2018 AM393_RS15165 908dccceeefbc91589e601ed60eb9f62 198 TIGRFAM TIGR01711 gspJ: type II secretion system protein J 6 192 4.4E-54 T 28-03-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 AM393_RS15165 908dccceeefbc91589e601ed60eb9f62 198 Pfam PF07963 Prokaryotic N-terminal methylation motif 4 27 3.3E-7 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site AM393_RS15165 908dccceeefbc91589e601ed60eb9f62 198 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 28 3.9E-7 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site AM393_RS15165 908dccceeefbc91589e601ed60eb9f62 198 Pfam PF11612 Type II secretion system (T2SS), protein J 59 190 1.7E-36 T 28-03-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 AM393_RS15165 908dccceeefbc91589e601ed60eb9f62 198 Gene3D G3DSA:3.10.610.10 38 144 1.8E-28 T 28-03-2018 AM393_RS15165 908dccceeefbc91589e601ed60eb9f62 198 SUPERFAMILY SSF54523 41 194 1.1E-47 T 28-03-2018 AM393_RS24445 32726a07b34a5872c2de2f5276a22eb6 418 SMART SM00091 129 198 0.041 T 28-03-2018 IPR000014 PAS domain AM393_RS24445 32726a07b34a5872c2de2f5276a22eb6 418 SMART SM00091 3 70 1.0 T 28-03-2018 IPR000014 PAS domain AM393_RS24445 32726a07b34a5872c2de2f5276a22eb6 418 Pfam PF08448 PAS fold 149 243 2.3E-7 T 28-03-2018 IPR013656 PAS fold-4 AM393_RS24445 32726a07b34a5872c2de2f5276a22eb6 418 SUPERFAMILY SSF55785 149 250 4.89E-11 T 28-03-2018 IPR000014 PAS domain AM393_RS24445 32726a07b34a5872c2de2f5276a22eb6 418 Pfam PF00990 Diguanylate cyclase, GGDEF domain 253 399 2.9E-36 T 28-03-2018 IPR000160 GGDEF domain AM393_RS24445 32726a07b34a5872c2de2f5276a22eb6 418 SMART SM00267 242 403 9.5E-52 T 28-03-2018 IPR000160 GGDEF domain AM393_RS24445 32726a07b34a5872c2de2f5276a22eb6 418 Gene3D G3DSA:3.30.450.20 123 257 3.0E-15 T 28-03-2018 AM393_RS24445 32726a07b34a5872c2de2f5276a22eb6 418 Pfam PF13188 PAS domain 7 38 0.019 T 28-03-2018 IPR000014 PAS domain AM393_RS24445 32726a07b34a5872c2de2f5276a22eb6 418 SUPERFAMILY SSF55073 258 401 1.33E-42 T 28-03-2018 IPR029787 Nucleotide cyclase AM393_RS24445 32726a07b34a5872c2de2f5276a22eb6 418 Gene3D G3DSA:3.30.450.20 5 105 0.0079 T 28-03-2018 AM393_RS24445 32726a07b34a5872c2de2f5276a22eb6 418 Gene3D G3DSA:3.30.70.270 258 403 9.6E-48 T 28-03-2018 AM393_RS24445 32726a07b34a5872c2de2f5276a22eb6 418 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 249 401 3.6E-39 T 28-03-2018 IPR000160 GGDEF domain AM393_RS24445 32726a07b34a5872c2de2f5276a22eb6 418 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 130 249 3.1E-8 T 28-03-2018 IPR000014 PAS domain AM393_RS15270 cf7bafde091e942298a0f7fdab7d9a8a 266 Gene3D G3DSA:3.40.50.1980 141 266 1.4E-24 T 28-03-2018 AM393_RS15270 cf7bafde091e942298a0f7fdab7d9a8a 266 Hamap MF_01000 Vitamin B12-binding protein [btuF]. 2 266 46.009 T 28-03-2018 IPR023544 ABC transporter, vitamin B12-binding protein GO:0015889|GO:0031419|GO:0042597 AM393_RS15270 cf7bafde091e942298a0f7fdab7d9a8a 266 Gene3D G3DSA:3.40.50.1980 22 140 3.4E-28 T 28-03-2018 AM393_RS15270 cf7bafde091e942298a0f7fdab7d9a8a 266 Pfam PF01497 Periplasmic binding protein 26 223 7.6E-30 T 28-03-2018 IPR002491 ABC transporter periplasmic binding domain GO:0005488 AM393_RS15270 cf7bafde091e942298a0f7fdab7d9a8a 266 SUPERFAMILY SSF53807 25 262 2.75E-58 T 28-03-2018 AM393_RS17670 8dfc6a0e6d28bb4b44e19a640b38810c 475 Pfam PF07690 Major Facilitator Superfamily 17 419 2.6E-37 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS17670 8dfc6a0e6d28bb4b44e19a640b38810c 475 SUPERFAMILY SSF103473 254 468 1.44E-52 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS17670 8dfc6a0e6d28bb4b44e19a640b38810c 475 SUPERFAMILY SSF103473 13 205 1.44E-52 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS17670 8dfc6a0e6d28bb4b44e19a640b38810c 475 Gene3D G3DSA:1.20.1250.20 264 472 3.2E-15 T 28-03-2018 AM393_RS17670 8dfc6a0e6d28bb4b44e19a640b38810c 475 Gene3D G3DSA:1.20.1250.20 9 207 1.2E-25 T 28-03-2018 AM393_RS08820 edbed408a74cb1f92a30211c5d639a57 356 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS08820 edbed408a74cb1f92a30211c5d639a57 356 Pfam PF08402 TOBE domain 278 348 2.2E-7 T 28-03-2018 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 AM393_RS08820 edbed408a74cb1f92a30211c5d639a57 356 Gene3D G3DSA:2.40.50.140 289 341 3.3E-14 T 28-03-2018 AM393_RS08820 edbed408a74cb1f92a30211c5d639a57 356 SUPERFAMILY SSF50331 237 355 1.87E-29 T 28-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal AM393_RS08820 edbed408a74cb1f92a30211c5d639a57 356 Gene3D G3DSA:3.40.50.300 2 239 3.3E-67 T 28-03-2018 AM393_RS08820 edbed408a74cb1f92a30211c5d639a57 356 Pfam PF00005 ABC transporter 21 162 4.2E-30 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS08820 edbed408a74cb1f92a30211c5d639a57 356 SMART SM00382 29 326 3.8E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS08820 edbed408a74cb1f92a30211c5d639a57 356 SUPERFAMILY SSF52540 4 243 5.18E-83 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS08820 edbed408a74cb1f92a30211c5d639a57 356 Gene3D G3DSA:2.40.50.100 240 288 3.9E-12 T 28-03-2018 AM393_RS22860 95c3512f7ef5879463fa95808a7ac06a 342 SUPERFAMILY SSF143865 18 271 1.05E-37 T 28-03-2018 AM393_RS22860 95c3512f7ef5879463fa95808a7ac06a 342 Gene3D G3DSA:3.30.460.20 7 152 4.9E-17 T 28-03-2018 AM393_RS22860 95c3512f7ef5879463fa95808a7ac06a 342 Gene3D G3DSA:1.20.58.340 274 342 9.4E-15 T 28-03-2018 AM393_RS22860 95c3512f7ef5879463fa95808a7ac06a 342 Pfam PF01544 CorA-like Mg2+ transporter protein 52 334 9.8E-48 T 28-03-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 AM393_RS22860 95c3512f7ef5879463fa95808a7ac06a 342 Gene3D G3DSA:1.20.58.340 153 273 1.0E-9 T 28-03-2018 AM393_RS22860 95c3512f7ef5879463fa95808a7ac06a 342 SUPERFAMILY SSF144083 277 338 9.42E-15 T 28-03-2018 AM393_RS07295 e2e8c8533960870e0130c796c2903bf2 443 Gene3D G3DSA:1.20.1250.20 239 443 2.1E-24 T 28-03-2018 AM393_RS07295 e2e8c8533960870e0130c796c2903bf2 443 PIRSF PIRSF002808 9 443 1.2E-33 T 28-03-2018 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 AM393_RS07295 e2e8c8533960870e0130c796c2903bf2 443 Gene3D G3DSA:1.20.1250.20 14 215 9.8E-34 T 28-03-2018 AM393_RS07295 e2e8c8533960870e0130c796c2903bf2 443 SUPERFAMILY SSF103473 5 442 9.42E-76 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS07295 e2e8c8533960870e0130c796c2903bf2 443 Pfam PF07690 Major Facilitator Superfamily 23 364 1.4E-47 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS07295 e2e8c8533960870e0130c796c2903bf2 443 TIGRFAM TIGR00893 2A0114: D-galactonate transporter 25 433 6.0E-136 T 28-03-2018 IPR004744 D-galactonate transporter GO:0005215|GO:0006810|GO:0016021 AM393_RS21245 2b7dfd1865aa71624e621f82cb743368 248 Pfam PF06629 MltA-interacting protein MipA 28 248 1.8E-51 T 28-03-2018 IPR010583 MltA-interacting MipA AM393_RS21245 2b7dfd1865aa71624e621f82cb743368 248 Gene3D G3DSA:2.40.160.20 8 248 1.8E-14 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AM393_RS26425 b247599740171b18d09114262b133f9a 792 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 9 792 0.0 T 28-03-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484 AM393_RS26425 b247599740171b18d09114262b133f9a 792 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 416 427 - T 28-03-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 AM393_RS26425 b247599740171b18d09114262b133f9a 792 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 484 784 1.4E-59 T 28-03-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 AM393_RS26425 b247599740171b18d09114262b133f9a 792 Pfam PF00391 PEP-utilising enzyme, mobile domain 386 457 1.8E-26 T 28-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AM393_RS26425 b247599740171b18d09114262b133f9a 792 Gene3D G3DSA:3.50.30.10 360 475 2.4E-35 T 28-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AM393_RS26425 b247599740171b18d09114262b133f9a 792 Gene3D G3DSA:3.30.1490.20 6 197 5.9E-53 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AM393_RS26425 b247599740171b18d09114262b133f9a 792 Gene3D G3DSA:3.20.20.60 480 792 8.1E-103 T 28-03-2018 AM393_RS26425 b247599740171b18d09114262b133f9a 792 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 696 714 - T 28-03-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 AM393_RS26425 b247599740171b18d09114262b133f9a 792 PIRSF PIRSF000854 4 792 0.0 T 28-03-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484 AM393_RS26425 b247599740171b18d09114262b133f9a 792 Gene3D G3DSA:3.30.470.20 198 359 8.3E-45 T 28-03-2018 AM393_RS26425 b247599740171b18d09114262b133f9a 792 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 22 350 2.1E-120 T 28-03-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 AM393_RS26425 b247599740171b18d09114262b133f9a 792 SUPERFAMILY SSF52009 350 468 9.42E-35 T 28-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AM393_RS26425 b247599740171b18d09114262b133f9a 792 SUPERFAMILY SSF56059 7 386 1.24E-109 T 28-03-2018 AM393_RS26425 b247599740171b18d09114262b133f9a 792 SUPERFAMILY SSF51621 474 790 7.85E-95 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AM393_RS18290 d1dc40c361cb623bcd9da180d854ed4f 214 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 71 86 - T 28-03-2018 IPR020605 Octanoyltransferase, conserved site GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 AM393_RS18290 d1dc40c361cb623bcd9da180d854ed4f 214 SUPERFAMILY SSF55681 4 205 7.87E-68 T 28-03-2018 AM393_RS18290 d1dc40c361cb623bcd9da180d854ed4f 214 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 75 128 7.0E-22 T 28-03-2018 AM393_RS18290 d1dc40c361cb623bcd9da180d854ed4f 214 Gene3D G3DSA:3.30.930.10 1 204 4.3E-60 T 28-03-2018 AM393_RS18290 d1dc40c361cb623bcd9da180d854ed4f 214 Hamap MF_00013 Octanoyltransferase [lipB]. 5 206 37.437 T 28-03-2018 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AM393_RS18290 d1dc40c361cb623bcd9da180d854ed4f 214 Pfam PF03099 Biotin/lipoate A/B protein ligase family 63 159 8.3E-7 T 28-03-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 AM393_RS18290 d1dc40c361cb623bcd9da180d854ed4f 214 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 27 204 1.3E-78 T 28-03-2018 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AM393_RS18290 d1dc40c361cb623bcd9da180d854ed4f 214 PIRSF PIRSF016262 1 209 5.0E-58 T 28-03-2018 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AM393_RS01850 a92b41eb5b0fd0112834fe2257d0b2c2 282 Pfam PF06029 AlkA N-terminal domain 3 112 1.1E-29 T 28-03-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal AM393_RS01850 a92b41eb5b0fd0112834fe2257d0b2c2 282 Gene3D G3DSA:1.10.340.30 100 240 7.7E-27 T 28-03-2018 AM393_RS01850 a92b41eb5b0fd0112834fe2257d0b2c2 282 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 118 239 1.6E-9 T 28-03-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 AM393_RS01850 a92b41eb5b0fd0112834fe2257d0b2c2 282 SMART SM00478 130 276 7.1E-21 T 28-03-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 AM393_RS01850 a92b41eb5b0fd0112834fe2257d0b2c2 282 SUPERFAMILY SSF48150 101 275 1.27E-44 T 28-03-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 AM393_RS01850 a92b41eb5b0fd0112834fe2257d0b2c2 282 Gene3D G3DSA:1.10.1670.10 241 280 5.3E-9 T 28-03-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 AM393_RS01850 a92b41eb5b0fd0112834fe2257d0b2c2 282 SUPERFAMILY SSF55945 2 97 2.67E-28 T 28-03-2018 AM393_RS01850 a92b41eb5b0fd0112834fe2257d0b2c2 282 Gene3D G3DSA:3.30.310.20 1 99 2.4E-30 T 28-03-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal AM393_RS01850 a92b41eb5b0fd0112834fe2257d0b2c2 282 ProSitePatterns PS00516 Alkylbase DNA glycosidases alkA family signature. 214 238 - T 28-03-2018 IPR000035 Alkylbase DNA glycosidase, conserved site GO:0003905|GO:0006281 AM393_RS01850 a92b41eb5b0fd0112834fe2257d0b2c2 282 SMART SM01009 1 112 7.4E-46 T 28-03-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal AM393_RS14785 1408157740dd2e5b0175eb1a17d55b96 574 Gene3D G3DSA:3.40.50.970 1 184 3.9E-64 T 28-03-2018 AM393_RS14785 1408157740dd2e5b0175eb1a17d55b96 574 SUPERFAMILY SSF52518 370 567 1.79E-68 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold AM393_RS14785 1408157740dd2e5b0175eb1a17d55b96 574 SUPERFAMILY SSF52467 189 362 4.82E-63 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AM393_RS14785 1408157740dd2e5b0175eb1a17d55b96 574 Gene3D G3DSA:3.40.50.970 356 558 1.6E-52 T 28-03-2018 AM393_RS14785 1408157740dd2e5b0175eb1a17d55b96 574 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 196 330 2.5E-46 T 28-03-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 AM393_RS14785 1408157740dd2e5b0175eb1a17d55b96 574 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 394 545 2.8E-49 T 28-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AM393_RS14785 1408157740dd2e5b0175eb1a17d55b96 574 Gene3D G3DSA:3.40.50.1220 191 355 4.4E-55 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AM393_RS14785 1408157740dd2e5b0175eb1a17d55b96 574 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 431 450 - T 28-03-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 AM393_RS14785 1408157740dd2e5b0175eb1a17d55b96 574 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 4 569 1.4E-278 T 28-03-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 AM393_RS14785 1408157740dd2e5b0175eb1a17d55b96 574 SUPERFAMILY SSF52518 2 178 4.98E-63 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold AM393_RS14785 1408157740dd2e5b0175eb1a17d55b96 574 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 5 167 6.0E-57 T 28-03-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 AM393_RS07510 398d11ab26dab88a1eabcca49037a64e 447 Hamap MF_00581 Argininosuccinate synthase [argG]. 1 443 76.193 T 28-03-2018 IPR023437 Argininosuccinate synthase, type 2 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AM393_RS07510 398d11ab26dab88a1eabcca49037a64e 447 SUPERFAMILY SSF52402 3 186 1.28E-34 T 28-03-2018 AM393_RS07510 398d11ab26dab88a1eabcca49037a64e 447 TIGRFAM TIGR00032 argG: argininosuccinate synthase 13 419 9.5E-167 T 28-03-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AM393_RS07510 398d11ab26dab88a1eabcca49037a64e 447 Gene3D G3DSA:3.90.1260.10 179 374 2.3E-55 T 28-03-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AM393_RS07510 398d11ab26dab88a1eabcca49037a64e 447 Gene3D G3DSA:3.40.50.620 2 178 1.6E-18 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM393_RS07510 398d11ab26dab88a1eabcca49037a64e 447 Gene3D G3DSA:1.10.287.400 378 437 9.4E-28 T 28-03-2018 IPR024073 Argininosuccinate synthetase mutimerisation domain, C-terminal tail GO:0042803 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AM393_RS07510 398d11ab26dab88a1eabcca49037a64e 447 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 17 25 - T 28-03-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AM393_RS07510 398d11ab26dab88a1eabcca49037a64e 447 Pfam PF00764 Arginosuccinate synthase 16 408 4.3E-56 T 28-03-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AM393_RS07510 398d11ab26dab88a1eabcca49037a64e 447 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 129 140 - T 28-03-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AM393_RS07510 398d11ab26dab88a1eabcca49037a64e 447 SUPERFAMILY SSF69864 190 444 6.93E-80 T 28-03-2018 AM393_RS03505 c8634a91538dea757679fa157435d7d4 463 Pfam PF02601 Exonuclease VII, large subunit 126 440 2.3E-103 T 28-03-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 AM393_RS03505 c8634a91538dea757679fa157435d7d4 463 Gene3D G3DSA:2.40.50.140 7 105 2.0E-9 T 28-03-2018 AM393_RS03505 c8634a91538dea757679fa157435d7d4 463 Gene3D G3DSA:3.90.226.10 109 406 0.0066 T 28-03-2018 AM393_RS03505 c8634a91538dea757679fa157435d7d4 463 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 7 443 30.525 T 28-03-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 AM393_RS03505 c8634a91538dea757679fa157435d7d4 463 Pfam PF13742 OB-fold nucleic acid binding domain 10 103 9.9E-33 T 28-03-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 AM393_RS03505 c8634a91538dea757679fa157435d7d4 463 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 11 358 2.7E-140 T 28-03-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 AM393_RS04785 825007343cc9191da08e2a299aef41e7 400 SUPERFAMILY SSF103473 3 386 1.44E-64 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS04785 825007343cc9191da08e2a299aef41e7 400 Pfam PF07690 Major Facilitator Superfamily 12 235 6.9E-35 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS04785 825007343cc9191da08e2a299aef41e7 400 Gene3D G3DSA:1.20.1250.20 1 190 3.2E-30 T 28-03-2018 AM393_RS04785 825007343cc9191da08e2a299aef41e7 400 Gene3D G3DSA:1.20.1250.20 195 388 1.7E-23 T 28-03-2018 AM393_RS26025 820f19d51e010c31d7f83e9a408edbe4 356 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS26025 820f19d51e010c31d7f83e9a408edbe4 356 SUPERFAMILY SSF50331 243 353 6.8E-7 T 28-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal AM393_RS26025 820f19d51e010c31d7f83e9a408edbe4 356 SUPERFAMILY SSF52540 4 249 2.34E-81 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS26025 820f19d51e010c31d7f83e9a408edbe4 356 SMART SM00382 28 217 1.4E-15 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS26025 820f19d51e010c31d7f83e9a408edbe4 356 Pfam PF00005 ABC transporter 19 167 3.6E-35 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS26025 820f19d51e010c31d7f83e9a408edbe4 356 Gene3D G3DSA:3.40.50.300 3 266 2.2E-72 T 28-03-2018 AM393_RS25920 c8e815bffb9668a06a1b1745a146edfe 311 Pfam PF14305 TupA-like ATPgrasp 51 294 3.0E-48 T 28-03-2018 IPR029465 TupA-like ATPgrasp protein AM393_RS02275 9665de66a6ba5a805120c191736d448f 325 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 6 161 8.3E-39 T 28-03-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain AM393_RS02275 9665de66a6ba5a805120c191736d448f 325 Gene3D G3DSA:3.40.50.300 1 196 1.9E-27 T 28-03-2018 AM393_RS02275 9665de66a6ba5a805120c191736d448f 325 SUPERFAMILY SSF52540 6 166 3.75E-25 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS02275 9665de66a6ba5a805120c191736d448f 325 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 242 321 4.1E-6 T 28-03-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AM393_RS02275 9665de66a6ba5a805120c191736d448f 325 SMART SM00833 240 323 0.0014 T 28-03-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AM393_RS00130 993c219891090a7989a8808acb43f27b 431 Pfam PF07690 Major Facilitator Superfamily 22 368 1.5E-24 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS00130 993c219891090a7989a8808acb43f27b 431 SUPERFAMILY SSF103473 15 422 3.01E-62 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS00130 993c219891090a7989a8808acb43f27b 431 Gene3D G3DSA:1.20.1250.20 4 217 2.4E-23 T 28-03-2018 AM393_RS00130 993c219891090a7989a8808acb43f27b 431 Gene3D G3DSA:1.20.1250.20 225 430 8.0E-20 T 28-03-2018 AM393_RS00130 993c219891090a7989a8808acb43f27b 431 ProSitePatterns PS00217 Sugar transport proteins signature 2. 126 151 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM393_RS00130 993c219891090a7989a8808acb43f27b 431 ProSitePatterns PS00216 Sugar transport proteins signature 1. 294 311 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM393_RS00130 993c219891090a7989a8808acb43f27b 431 TIGRFAM TIGR00883 2A0106: MFS transporter, metabolite:H+ symporter (MHS) family protein 23 413 7.2E-144 T 28-03-2018 IPR004736 Citrate-proton symport GO:0005215|GO:0006810|GO:0016021 AM393_RS00130 993c219891090a7989a8808acb43f27b 431 ProSitePatterns PS00216 Sugar transport proteins signature 1. 76 92 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM393_RS20865 b23ad42f00644d03e725adbb1617f391 1148 Pfam PF02559 CarD-like/TRCF domain 477 572 8.1E-25 T 28-03-2018 IPR003711 CarD-like/TRCF domain AM393_RS20865 b23ad42f00644d03e725adbb1617f391 1148 SMART SM00982 1005 1105 5.4E-50 T 28-03-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 AM393_RS20865 b23ad42f00644d03e725adbb1617f391 1148 SUPERFAMILY SSF52540 351 463 1.06E-26 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS20865 b23ad42f00644d03e725adbb1617f391 1148 Gene3D G3DSA:3.40.50.300 785 953 9.9E-26 T 28-03-2018 AM393_RS20865 b23ad42f00644d03e725adbb1617f391 1148 SUPERFAMILY SSF52540 779 987 5.44E-49 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS20865 b23ad42f00644d03e725adbb1617f391 1148 Pfam PF00270 DEAD/DEAH box helicase 602 762 1.3E-20 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AM393_RS20865 b23ad42f00644d03e725adbb1617f391 1148 SUPERFAMILY SSF143517 992 1144 1.09E-45 T 28-03-2018 AM393_RS20865 b23ad42f00644d03e725adbb1617f391 1148 Pfam PF03461 TRCF domain 1006 1097 4.3E-30 T 28-03-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 AM393_RS20865 b23ad42f00644d03e725adbb1617f391 1148 SMART SM00487 597 787 1.9E-35 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AM393_RS20865 b23ad42f00644d03e725adbb1617f391 1148 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 31 1125 28.716 T 28-03-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 AM393_RS20865 b23ad42f00644d03e725adbb1617f391 1148 Gene3D G3DSA:3.40.50.300 547 774 3.0E-43 T 28-03-2018 AM393_RS20865 b23ad42f00644d03e725adbb1617f391 1148 SMART SM00490 823 907 1.9E-19 T 28-03-2018 IPR001650 Helicase, C-terminal AM393_RS20865 b23ad42f00644d03e725adbb1617f391 1148 SUPERFAMILY SSF52540 520 780 1.32E-63 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS20865 b23ad42f00644d03e725adbb1617f391 1148 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 148 1079 0.0 T 28-03-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 AM393_RS20865 b23ad42f00644d03e725adbb1617f391 1148 Pfam PF00271 Helicase conserved C-terminal domain 802 906 6.5E-18 T 28-03-2018 IPR001650 Helicase, C-terminal AM393_RS20865 b23ad42f00644d03e725adbb1617f391 1148 SMART SM01058 476 573 8.4E-50 T 28-03-2018 IPR003711 CarD-like/TRCF domain AM393_RS20865 b23ad42f00644d03e725adbb1617f391 1148 SUPERFAMILY SSF52540 9 340 1.44E-98 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS20865 b23ad42f00644d03e725adbb1617f391 1148 Gene3D G3DSA:3.30.2060.10 130 190 3.1E-5 T 28-03-2018 AM393_RS20865 b23ad42f00644d03e725adbb1617f391 1148 SUPERFAMILY SSF141259 467 545 1.57E-23 T 28-03-2018 IPR003711 CarD-like/TRCF domain AM393_RS06230 e0507ed9a276eacb56940da5fd6375b6 239 Gene3D G3DSA:3.40.50.150 30 239 3.1E-28 T 28-03-2018 AM393_RS06230 e0507ed9a276eacb56940da5fd6375b6 239 SUPERFAMILY SSF53335 18 237 2.43E-39 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM393_RS06230 e0507ed9a276eacb56940da5fd6375b6 239 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 50 238 1.9E-72 T 28-03-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 AM393_RS06230 e0507ed9a276eacb56940da5fd6375b6 239 Pfam PF02390 Putative methyltransferase 64 233 8.9E-62 T 28-03-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 AM393_RS06230 e0507ed9a276eacb56940da5fd6375b6 239 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 24 238 30.7 T 28-03-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 AM393_RS09005 01ada9b11d2dcb8ff1d13298558c915f 167 Pfam PF05870 Phenolic acid decarboxylase (PAD) 9 165 1.2E-86 T 28-03-2018 IPR008729 Phenolic acid decarboxylase, bacterial GO:0016831 AM393_RS09005 01ada9b11d2dcb8ff1d13298558c915f 167 PIRSF PIRSF011561 2 167 4.1E-80 T 28-03-2018 IPR008729 Phenolic acid decarboxylase, bacterial GO:0016831 AM393_RS09005 01ada9b11d2dcb8ff1d13298558c915f 167 ProDom PD022010 DECARBOXYLASE ACID PHENOLIC P-COUMARIC LYASE 4.1.1.- PAD PADC FERULATE PROBABLE 9 153 5.0E-69 T 28-03-2018 IPR008729 Phenolic acid decarboxylase, bacterial GO:0016831 AM393_RS09005 01ada9b11d2dcb8ff1d13298558c915f 167 SUPERFAMILY SSF50814 3 166 8.03E-73 T 28-03-2018 IPR012674 Calycin AM393_RS09005 01ada9b11d2dcb8ff1d13298558c915f 167 Gene3D G3DSA:2.40.128.20 10 162 6.5E-60 T 28-03-2018 IPR012674 Calycin AM393_RS04800 17246787d068d4f319ef1647c3049e94 378 Gene3D G3DSA:2.70.70.10 234 378 7.2E-38 T 28-03-2018 AM393_RS04800 17246787d068d4f319ef1647c3049e94 378 Gene3D G3DSA:3.10.350.10 109 199 3.0E-11 T 28-03-2018 AM393_RS04800 17246787d068d4f319ef1647c3049e94 378 SUPERFAMILY SSF51261 115 375 1.99E-52 T 28-03-2018 IPR011055 Duplicated hybrid motif AM393_RS04800 17246787d068d4f319ef1647c3049e94 378 SMART SM00257 115 159 5.4E-10 T 28-03-2018 IPR018392 LysM domain AM393_RS04800 17246787d068d4f319ef1647c3049e94 378 Pfam PF01476 LysM domain 116 158 6.8E-10 T 28-03-2018 IPR018392 LysM domain AM393_RS04800 17246787d068d4f319ef1647c3049e94 378 Pfam PF01551 Peptidase family M23 278 371 1.2E-31 T 28-03-2018 IPR016047 Peptidase M23 AM393_RS24400 b40e246e0bf3f7db325a672491fb7c07 206 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 197 2.8E-50 T 28-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AM393_RS24400 b40e246e0bf3f7db325a672491fb7c07 206 SUPERFAMILY SSF53254 1 204 6.0E-52 T 28-03-2018 IPR029033 Histidine phosphatase superfamily AM393_RS24400 b40e246e0bf3f7db325a672491fb7c07 206 PIRSF PIRSF000709 2 178 6.4E-15 T 28-03-2018 AM393_RS24400 b40e246e0bf3f7db325a672491fb7c07 206 SMART SM00855 3 159 1.6E-17 T 28-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AM393_RS24400 b40e246e0bf3f7db325a672491fb7c07 206 Gene3D G3DSA:3.40.50.1240 1 206 3.3E-50 T 28-03-2018 IPR029033 Histidine phosphatase superfamily AM393_RS24490 c6cd97885b029b0fecfe2cb4eb95169f 461 SUPERFAMILY SSF53383 31 453 2.11E-125 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM393_RS24490 c6cd97885b029b0fecfe2cb4eb95169f 461 TIGRFAM TIGR00709 dat: 2,4-diaminobutyrate 4-transaminase 22 455 1.2E-211 T 28-03-2018 IPR004637 2,4-diaminobutyrate 4-transaminase GO:0008483|GO:0009058 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|MetaCyc: PWY-7855 AM393_RS24490 c6cd97885b029b0fecfe2cb4eb95169f 461 Gene3D G3DSA:3.40.640.10 67 329 5.9E-69 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM393_RS24490 c6cd97885b029b0fecfe2cb4eb95169f 461 PIRSF PIRSF000521 24 149 9.5E-8 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM393_RS24490 c6cd97885b029b0fecfe2cb4eb95169f 461 PIRSF PIRSF000521 142 456 7.5E-36 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM393_RS24490 c6cd97885b029b0fecfe2cb4eb95169f 461 Pfam PF00202 Aminotransferase class-III 40 453 2.9E-100 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM393_RS24490 c6cd97885b029b0fecfe2cb4eb95169f 461 Gene3D G3DSA:3.90.1150.10 330 459 3.2E-29 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM393_RS24490 c6cd97885b029b0fecfe2cb4eb95169f 461 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 263 300 - T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM393_RS12155 436e8339deef00c2cde4efd9a2387914 122 SMART SM00342 31 115 3.9E-31 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM393_RS12155 436e8339deef00c2cde4efd9a2387914 122 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 99 115 2.9E-6 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM393_RS12155 436e8339deef00c2cde4efd9a2387914 122 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 84 99 2.9E-6 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM393_RS12155 436e8339deef00c2cde4efd9a2387914 122 Gene3D G3DSA:1.10.10.60 6 67 7.0E-15 T 28-03-2018 AM393_RS12155 436e8339deef00c2cde4efd9a2387914 122 Gene3D G3DSA:1.10.10.60 68 122 4.7E-12 T 28-03-2018 AM393_RS12155 436e8339deef00c2cde4efd9a2387914 122 Pfam PF12833 Helix-turn-helix domain 38 115 8.1E-23 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM393_RS12155 436e8339deef00c2cde4efd9a2387914 122 SUPERFAMILY SSF46689 68 118 1.61E-12 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS12155 436e8339deef00c2cde4efd9a2387914 122 SUPERFAMILY SSF46689 16 66 8.06E-11 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS14500 54b12a00409470fd12a19889fbb188f0 594 SUPERFAMILY SSF51230 519 593 1.11E-21 T 28-03-2018 IPR011053 Single hybrid motif AM393_RS14500 54b12a00409470fd12a19889fbb188f0 594 TIGRFAM TIGR01108 oadA: oxaloacetate decarboxylase alpha subunit 5 590 3.8E-300 T 28-03-2018 IPR005776 Oxaloacetate decarboxylase, alpha subunit GO:0006814|GO:0008948 AM393_RS14500 54b12a00409470fd12a19889fbb188f0 594 Gene3D G3DSA:1.10.10.60 397 451 1.7E-11 T 28-03-2018 AM393_RS14500 54b12a00409470fd12a19889fbb188f0 594 Pfam PF00682 HMGL-like 3 268 7.5E-73 T 28-03-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 AM393_RS14500 54b12a00409470fd12a19889fbb188f0 594 Gene3D G3DSA:3.20.20.70 1 282 4.2E-74 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM393_RS14500 54b12a00409470fd12a19889fbb188f0 594 Pfam PF02436 Conserved carboxylase domain 290 489 5.4E-55 T 28-03-2018 IPR003379 Carboxylase, conserved domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 AM393_RS14500 54b12a00409470fd12a19889fbb188f0 594 Gene3D G3DSA:2.40.50.100 525 594 5.4E-21 T 28-03-2018 AM393_RS14500 54b12a00409470fd12a19889fbb188f0 594 SUPERFAMILY SSF51569 3 298 7.87E-89 T 28-03-2018 AM393_RS14500 54b12a00409470fd12a19889fbb188f0 594 Pfam PF00364 Biotin-requiring enzyme 528 593 1.0E-17 T 28-03-2018 IPR000089 Biotin/lipoyl attachment AM393_RS14500 54b12a00409470fd12a19889fbb188f0 594 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 550 567 - T 28-03-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AM393_RS14500 54b12a00409470fd12a19889fbb188f0 594 SUPERFAMILY SSF89000 295 455 5.89E-47 T 28-03-2018 AM393_RS02015 5af973eaf8d10a3314a0cd1ef4ea33d7 369 ProSitePatterns PS01215 Mrp family signature. 213 229 - T 28-03-2018 IPR000808 Mrp, conserved site GO:0005524 AM393_RS02015 5af973eaf8d10a3314a0cd1ef4ea33d7 369 SUPERFAMILY SSF117916 16 90 3.92E-6 T 28-03-2018 IPR034904 Fe-S cluster assembly domain AM393_RS02015 5af973eaf8d10a3314a0cd1ef4ea33d7 369 Gene3D G3DSA:3.40.50.300 106 358 5.6E-61 T 28-03-2018 AM393_RS02015 5af973eaf8d10a3314a0cd1ef4ea33d7 369 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 106 349 1.5E-100 T 28-03-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 AM393_RS02015 5af973eaf8d10a3314a0cd1ef4ea33d7 369 Gene3D G3DSA:3.30.300.130 11 101 3.4E-4 T 28-03-2018 IPR034904 Fe-S cluster assembly domain AM393_RS02015 5af973eaf8d10a3314a0cd1ef4ea33d7 369 SUPERFAMILY SSF52540 108 354 3.12E-56 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS02015 5af973eaf8d10a3314a0cd1ef4ea33d7 369 Hamap MF_02040 Iron-sulfur cluster carrier protein. 101 350 37.34 T 28-03-2018 IPR019591 Mrp/NBP35 ATP-binding protein AM393_RS16285 bf6dbd4c92dfa2d56d49f8a1b381ac58 294 Gene3D G3DSA:2.40.230.20 26 294 1.7E-77 T 28-03-2018 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 AM393_RS16285 bf6dbd4c92dfa2d56d49f8a1b381ac58 294 Pfam PF03502 Nucleoside-specific channel-forming protein, Tsx 32 294 2.4E-81 T 28-03-2018 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 AM393_RS16285 bf6dbd4c92dfa2d56d49f8a1b381ac58 294 SUPERFAMILY SSF111364 32 294 6.02E-87 T 28-03-2018 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 AM393_RS16285 bf6dbd4c92dfa2d56d49f8a1b381ac58 294 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 182 205 1.8E-115 T 28-03-2018 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 AM393_RS16285 bf6dbd4c92dfa2d56d49f8a1b381ac58 294 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 270 293 1.8E-115 T 28-03-2018 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 AM393_RS16285 bf6dbd4c92dfa2d56d49f8a1b381ac58 294 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 55 79 1.8E-115 T 28-03-2018 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 AM393_RS16285 bf6dbd4c92dfa2d56d49f8a1b381ac58 294 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 150 175 1.8E-115 T 28-03-2018 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 AM393_RS16285 bf6dbd4c92dfa2d56d49f8a1b381ac58 294 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 115 135 1.8E-115 T 28-03-2018 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 AM393_RS16285 bf6dbd4c92dfa2d56d49f8a1b381ac58 294 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 240 259 1.8E-115 T 28-03-2018 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 AM393_RS16285 bf6dbd4c92dfa2d56d49f8a1b381ac58 294 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 28 50 1.8E-115 T 28-03-2018 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 AM393_RS16285 bf6dbd4c92dfa2d56d49f8a1b381ac58 294 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 89 110 1.8E-115 T 28-03-2018 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 AM393_RS00620 f94d2b51426f7211f5547f4d89ab76af 392 Gene3D G3DSA:3.40.50.20 8 129 7.7E-21 T 28-03-2018 AM393_RS00620 f94d2b51426f7211f5547f4d89ab76af 392 Hamap MF_01643 Phosphoribosylglycinamide formyltransferase 2 [purT]. 8 391 51.53 T 28-03-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 AM393_RS00620 f94d2b51426f7211f5547f4d89ab76af 392 Gene3D G3DSA:3.30.1490.20 130 197 7.2E-21 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AM393_RS00620 f94d2b51426f7211f5547f4d89ab76af 392 TIGRFAM TIGR01142 purT: phosphoribosylglycinamide formyltransferase 2 14 390 6.5E-189 T 28-03-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 AM393_RS00620 f94d2b51426f7211f5547f4d89ab76af 392 Gene3D G3DSA:3.30.470.20 198 392 6.6E-36 T 28-03-2018 AM393_RS00620 f94d2b51426f7211f5547f4d89ab76af 392 SUPERFAMILY SSF56059 113 314 5.83E-56 T 28-03-2018 AM393_RS00620 f94d2b51426f7211f5547f4d89ab76af 392 SUPERFAMILY SSF52440 3 112 2.45E-35 T 28-03-2018 IPR016185 Pre-ATP-grasp domain AM393_RS00620 f94d2b51426f7211f5547f4d89ab76af 392 Pfam PF02222 ATP-grasp domain 123 295 2.4E-56 T 28-03-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type AM393_RS00620 f94d2b51426f7211f5547f4d89ab76af 392 SUPERFAMILY SSF51246 319 391 1.16E-17 T 28-03-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 AM393_RS13475 8f8731714d988540a5b021c007fb0f83 81 Pfam PF04606 Ogr/Delta-like zinc finger 3 49 1.5E-19 T 28-03-2018 IPR007684 Zinc finger, Ogr/Delta-type AM393_RS20780 5415c92c639d45d4f8076fc32809c1a9 213 Pfam PF02223 Thymidylate kinase 8 200 4.6E-57 T 28-03-2018 AM393_RS20780 5415c92c639d45d4f8076fc32809c1a9 213 Gene3D G3DSA:3.40.50.300 1 211 5.3E-48 T 28-03-2018 AM393_RS20780 5415c92c639d45d4f8076fc32809c1a9 213 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 2 200 2.9E-65 T 28-03-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 AM393_RS20780 5415c92c639d45d4f8076fc32809c1a9 213 SUPERFAMILY SSF52540 1 208 3.26E-51 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS20780 5415c92c639d45d4f8076fc32809c1a9 213 Hamap MF_00165 Thymidylate kinase [tmk]. 4 208 28.609 T 28-03-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 AM393_RS20780 5415c92c639d45d4f8076fc32809c1a9 213 ProSitePatterns PS01331 Thymidylate kinase signature. 97 109 - T 28-03-2018 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 AM393_RS27430 18cb8a1c36b3cc8059ad48ec6d360639 815 SUPERFAMILY SSF47240 25 87 3.49E-5 T 28-03-2018 IPR009078 Ferritin-like superfamily AM393_RS27430 18cb8a1c36b3cc8059ad48ec6d360639 815 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 224 808 1.1E-187 T 28-03-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 AM393_RS27430 18cb8a1c36b3cc8059ad48ec6d360639 815 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 502 508 - T 28-03-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 AM393_RS27430 18cb8a1c36b3cc8059ad48ec6d360639 815 Pfam PF04945 YHS domain 30 76 3.4E-19 T 28-03-2018 IPR007029 YHS domain AM393_RS27430 18cb8a1c36b3cc8059ad48ec6d360639 815 Pfam PF00122 E1-E2 ATPase 298 479 8.0E-58 T 28-03-2018 AM393_RS27430 18cb8a1c36b3cc8059ad48ec6d360639 815 PRINTS PR00943 Copper-transporting ATPase signature 676 693 3.1E-11 T 28-03-2018 AM393_RS27430 18cb8a1c36b3cc8059ad48ec6d360639 815 PRINTS PR00943 Copper-transporting ATPase signature 267 286 3.1E-11 T 28-03-2018 AM393_RS27430 18cb8a1c36b3cc8059ad48ec6d360639 815 PRINTS PR00943 Copper-transporting ATPase signature 483 498 3.1E-11 T 28-03-2018 AM393_RS27430 18cb8a1c36b3cc8059ad48ec6d360639 815 PRINTS PR00943 Copper-transporting ATPase signature 287 305 3.1E-11 T 28-03-2018 AM393_RS27430 18cb8a1c36b3cc8059ad48ec6d360639 815 PRINTS PR00943 Copper-transporting ATPase signature 421 435 3.1E-11 T 28-03-2018 AM393_RS27430 18cb8a1c36b3cc8059ad48ec6d360639 815 PRINTS PR00943 Copper-transporting ATPase signature 209 228 3.1E-11 T 28-03-2018 AM393_RS27430 18cb8a1c36b3cc8059ad48ec6d360639 815 SMART SM00746 32 70 8.9E-9 T 28-03-2018 IPR011017 TRASH domain AM393_RS27430 18cb8a1c36b3cc8059ad48ec6d360639 815 Gene3D G3DSA:3.40.50.1000 626 763 4.4E-41 T 28-03-2018 IPR023214 HAD-like domain AM393_RS27430 18cb8a1c36b3cc8059ad48ec6d360639 815 Gene3D G3DSA:1.10.620.20 3 128 1.1E-18 T 28-03-2018 AM393_RS27430 18cb8a1c36b3cc8059ad48ec6d360639 815 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 348 362 7.5E-31 T 28-03-2018 AM393_RS27430 18cb8a1c36b3cc8059ad48ec6d360639 815 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 646 656 7.5E-31 T 28-03-2018 AM393_RS27430 18cb8a1c36b3cc8059ad48ec6d360639 815 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 699 718 7.5E-31 T 28-03-2018 AM393_RS27430 18cb8a1c36b3cc8059ad48ec6d360639 815 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 500 514 7.5E-31 T 28-03-2018 AM393_RS27430 18cb8a1c36b3cc8059ad48ec6d360639 815 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 722 734 7.5E-31 T 28-03-2018 AM393_RS27430 18cb8a1c36b3cc8059ad48ec6d360639 815 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 624 635 7.5E-31 T 28-03-2018 AM393_RS27430 18cb8a1c36b3cc8059ad48ec6d360639 815 Gene3D G3DSA:1.20.1110.10 254 516 4.3E-47 T 28-03-2018 AM393_RS27430 18cb8a1c36b3cc8059ad48ec6d360639 815 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 269 777 9.1E-91 T 28-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AM393_RS27430 18cb8a1c36b3cc8059ad48ec6d360639 815 SUPERFAMILY SSF56784 557 806 8.25E-55 T 28-03-2018 IPR023214 HAD-like domain AM393_RS27430 18cb8a1c36b3cc8059ad48ec6d360639 815 SUPERFAMILY SSF56784 498 518 8.25E-55 T 28-03-2018 IPR023214 HAD-like domain AM393_RS27430 18cb8a1c36b3cc8059ad48ec6d360639 815 Gene3D G3DSA:3.40.1110.10 517 625 3.5E-30 T 28-03-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 AM393_RS27430 18cb8a1c36b3cc8059ad48ec6d360639 815 SUPERFAMILY SSF81653 302 398 3.79E-28 T 28-03-2018 IPR008250 P-type ATPase, A domain Reactome: R-HSA-936837 AM393_RS27430 18cb8a1c36b3cc8059ad48ec6d360639 815 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 206 809 4.4E-177 T 28-03-2018 AM393_RS27430 18cb8a1c36b3cc8059ad48ec6d360639 815 Pfam PF00702 haloacid dehalogenase-like hydrolase 496 713 1.3E-44 T 28-03-2018 AM393_RS27430 18cb8a1c36b3cc8059ad48ec6d360639 815 SUPERFAMILY SSF81665 249 301 6.93E-13 T 28-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 AM393_RS27430 18cb8a1c36b3cc8059ad48ec6d360639 815 SUPERFAMILY SSF81665 399 493 6.93E-13 T 28-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 AM393_RS04790 ebe7ac33118a6ca505144b25c17381e1 125 SUPERFAMILY SSF54427 2 124 1.62E-35 T 28-03-2018 IPR032710 NTF2-like domain AM393_RS04790 ebe7ac33118a6ca505144b25c17381e1 125 PIRSF PIRSF029394 1 125 1.4E-42 T 28-03-2018 IPR016918 Uncharacterised conserved protein UCP029394 AM393_RS04790 ebe7ac33118a6ca505144b25c17381e1 125 Gene3D G3DSA:3.10.450.50 3 123 2.0E-31 T 28-03-2018 AM393_RS03040 d965e1437006e897dd95b509d9391102 723 Gene3D G3DSA:3.20.20.450 475 723 9.1E-66 T 28-03-2018 IPR001633 EAL domain AM393_RS03040 d965e1437006e897dd95b509d9391102 723 Pfam PF00563 EAL domain 494 718 3.3E-56 T 28-03-2018 IPR001633 EAL domain AM393_RS03040 d965e1437006e897dd95b509d9391102 723 SUPERFAMILY SSF55073 329 444 8.63E-8 T 28-03-2018 IPR029787 Nucleotide cyclase AM393_RS03040 d965e1437006e897dd95b509d9391102 723 SMART SM00267 313 471 5.5E-14 T 28-03-2018 IPR000160 GGDEF domain AM393_RS03040 d965e1437006e897dd95b509d9391102 723 Gene3D G3DSA:3.30.70.270 307 465 1.1E-12 T 28-03-2018 AM393_RS03040 d965e1437006e897dd95b509d9391102 723 SMART SM00052 485 723 2.0E-74 T 28-03-2018 IPR001633 EAL domain AM393_RS03040 d965e1437006e897dd95b509d9391102 723 SUPERFAMILY SSF141868 493 722 8.37E-65 T 28-03-2018 IPR001633 EAL domain AM393_RS03040 d965e1437006e897dd95b509d9391102 723 Pfam PF05231 MASE1 14 307 5.5E-33 T 28-03-2018 IPR007895 MASE1 AM393_RS03040 d965e1437006e897dd95b509d9391102 723 Pfam PF00990 Diguanylate cyclase, GGDEF domain 326 431 5.3E-6 T 28-03-2018 IPR000160 GGDEF domain AM393_RS17510 9a8468eea65b2e52b248e90ce456e7ab 258 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 6 250 7.3E-80 T 28-03-2018 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter GO:0006810|GO:0030288 AM393_RS17510 9a8468eea65b2e52b248e90ce456e7ab 258 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 25 251 5.1E-61 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM393_RS17510 9a8468eea65b2e52b248e90ce456e7ab 258 Gene3D G3DSA:3.40.190.10 168 256 6.1E-12 T 28-03-2018 AM393_RS17510 9a8468eea65b2e52b248e90ce456e7ab 258 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 47 60 - T 28-03-2018 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 AM393_RS17510 9a8468eea65b2e52b248e90ce456e7ab 258 SMART SM00062 24 253 7.3E-63 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM393_RS17510 9a8468eea65b2e52b248e90ce456e7ab 258 Gene3D G3DSA:3.40.190.10 14 167 9.2E-37 T 28-03-2018 AM393_RS17510 9a8468eea65b2e52b248e90ce456e7ab 258 SUPERFAMILY SSF53850 1 254 2.74E-64 T 28-03-2018 AM393_RS28965 442a511fa1e91b4780c3b6cd9960561c 423 Gene3D G3DSA:3.30.1490.100 247 362 5.0E-26 T 28-03-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AM393_RS28965 442a511fa1e91b4780c3b6cd9960561c 423 SUPERFAMILY SSF100879 246 345 4.32E-7 T 28-03-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AM393_RS28965 442a511fa1e91b4780c3b6cd9960561c 423 Gene3D G3DSA:3.30.70.270 37 112 7.0E-15 T 28-03-2018 AM393_RS28965 442a511fa1e91b4780c3b6cd9960561c 423 Gene3D G3DSA:3.30.70.270 113 172 1.6E-8 T 28-03-2018 AM393_RS28965 442a511fa1e91b4780c3b6cd9960561c 423 Pfam PF13438 Domain of unknown function (DUF4113) 372 419 3.0E-20 T 28-03-2018 IPR025188 Domain of unknown function DUF4113 AM393_RS28965 442a511fa1e91b4780c3b6cd9960561c 423 Pfam PF00817 impB/mucB/samB family 6 148 4.6E-33 T 28-03-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AM393_RS28965 442a511fa1e91b4780c3b6cd9960561c 423 Gene3D G3DSA:1.10.150.20 173 246 1.5E-15 T 28-03-2018 AM393_RS28965 442a511fa1e91b4780c3b6cd9960561c 423 Pfam PF11799 impB/mucB/samB family C-terminal domain 239 354 7.3E-19 T 28-03-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AM393_RS28965 442a511fa1e91b4780c3b6cd9960561c 423 SUPERFAMILY SSF56672 1 237 8.09E-61 T 28-03-2018 AM393_RS04885 0f9487dedb0130124827504b4211ed97 223 Pfam PF04055 Radical SAM superfamily 27 183 2.2E-9 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AM393_RS04885 0f9487dedb0130124827504b4211ed97 223 TIGRFAM TIGR04322 rSAM_QueE_Ecoli: putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 9 223 7.7E-111 T 28-03-2018 IPR027609 Putative 7-carboxy-7-deazaguanine synthase QueE, Proteobacteria KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 AM393_RS04885 0f9487dedb0130124827504b4211ed97 223 Gene3D G3DSA:3.20.20.70 24 199 5.2E-12 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM393_RS04885 0f9487dedb0130124827504b4211ed97 223 PIRSF PIRSF000370 1 223 3.2E-73 T 28-03-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 AM393_RS04885 0f9487dedb0130124827504b4211ed97 223 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 3 223 39.694 T 28-03-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 AM393_RS04885 0f9487dedb0130124827504b4211ed97 223 SUPERFAMILY SSF102114 24 119 4.32E-7 T 28-03-2018 AM393_RS04885 0f9487dedb0130124827504b4211ed97 223 Pfam PF13394 4Fe-4S single cluster domain 24 128 8.3E-13 T 28-03-2018 AM393_RS20650 066b57d7781d0d3287d6ec24b496d382 372 Gene3D G3DSA:3.50.50.60 1 372 6.5E-35 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS20650 066b57d7781d0d3287d6ec24b496d382 372 Pfam PF01266 FAD dependent oxidoreductase 4 350 1.4E-45 T 28-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AM393_RS20650 066b57d7781d0d3287d6ec24b496d382 372 SUPERFAMILY SSF51905 313 370 2.82E-44 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS20650 066b57d7781d0d3287d6ec24b496d382 372 SUPERFAMILY SSF51905 2 216 2.82E-44 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS20650 066b57d7781d0d3287d6ec24b496d382 372 SUPERFAMILY SSF54373 212 312 2.67E-17 T 28-03-2018 AM393_RS20650 066b57d7781d0d3287d6ec24b496d382 372 Hamap MF_00515 N-methyl-L-tryptophan oxidase [solA]. 1 371 74.004 T 28-03-2018 IPR023493 N-methyl-L-tryptophan oxidase MTOX GO:0050131|GO:0050660|GO:0055114 AM393_RS05810 c8a4fc06df526d7fc4b90b9bfc563731 309 SUPERFAMILY SSF46785 3 82 1.56E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS05810 c8a4fc06df526d7fc4b90b9bfc563731 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 6.2E-13 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS05810 c8a4fc06df526d7fc4b90b9bfc563731 309 Pfam PF03466 LysR substrate binding domain 93 295 5.0E-24 T 28-03-2018 IPR005119 LysR, substrate-binding AM393_RS05810 c8a4fc06df526d7fc4b90b9bfc563731 309 Gene3D G3DSA:3.40.190.10 94 179 4.9E-12 T 28-03-2018 AM393_RS05810 c8a4fc06df526d7fc4b90b9bfc563731 309 SUPERFAMILY SSF53850 89 295 1.77E-38 T 28-03-2018 AM393_RS05810 c8a4fc06df526d7fc4b90b9bfc563731 309 Gene3D G3DSA:1.10.10.10 1 88 2.0E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS05810 c8a4fc06df526d7fc4b90b9bfc563731 309 Gene3D G3DSA:3.40.190.10 180 268 9.2E-20 T 28-03-2018 AM393_RS01600 9b529810209dd1bf2c07371f55dfdd59 494 Gene3D G3DSA:3.30.70.270 106 364 4.4E-31 T 28-03-2018 AM393_RS01600 9b529810209dd1bf2c07371f55dfdd59 494 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 80 450 7.5E-113 T 28-03-2018 IPR030931 Group II intron reverse transcriptase/maturase AM393_RS01600 9b529810209dd1bf2c07371f55dfdd59 494 SUPERFAMILY SSF56672 54 414 2.6E-63 T 28-03-2018 AM393_RS01600 9b529810209dd1bf2c07371f55dfdd59 494 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 134 364 7.5E-51 T 28-03-2018 IPR000477 Reverse transcriptase domain AM393_RS27265 9b529810209dd1bf2c07371f55dfdd59 494 Gene3D G3DSA:3.30.70.270 106 364 4.4E-31 T 28-03-2018 AM393_RS27265 9b529810209dd1bf2c07371f55dfdd59 494 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 80 450 7.5E-113 T 28-03-2018 IPR030931 Group II intron reverse transcriptase/maturase AM393_RS27265 9b529810209dd1bf2c07371f55dfdd59 494 SUPERFAMILY SSF56672 54 414 2.6E-63 T 28-03-2018 AM393_RS27265 9b529810209dd1bf2c07371f55dfdd59 494 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 134 364 7.5E-51 T 28-03-2018 IPR000477 Reverse transcriptase domain AM393_RS28980 9b529810209dd1bf2c07371f55dfdd59 494 Gene3D G3DSA:3.30.70.270 106 364 4.4E-31 T 28-03-2018 AM393_RS28980 9b529810209dd1bf2c07371f55dfdd59 494 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 80 450 7.5E-113 T 28-03-2018 IPR030931 Group II intron reverse transcriptase/maturase AM393_RS28980 9b529810209dd1bf2c07371f55dfdd59 494 SUPERFAMILY SSF56672 54 414 2.6E-63 T 28-03-2018 AM393_RS28980 9b529810209dd1bf2c07371f55dfdd59 494 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 134 364 7.5E-51 T 28-03-2018 IPR000477 Reverse transcriptase domain AM393_RS21185 9b529810209dd1bf2c07371f55dfdd59 494 Gene3D G3DSA:3.30.70.270 106 364 4.4E-31 T 28-03-2018 AM393_RS21185 9b529810209dd1bf2c07371f55dfdd59 494 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 80 450 7.5E-113 T 28-03-2018 IPR030931 Group II intron reverse transcriptase/maturase AM393_RS21185 9b529810209dd1bf2c07371f55dfdd59 494 SUPERFAMILY SSF56672 54 414 2.6E-63 T 28-03-2018 AM393_RS21185 9b529810209dd1bf2c07371f55dfdd59 494 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 134 364 7.5E-51 T 28-03-2018 IPR000477 Reverse transcriptase domain AM393_RS01760 9b529810209dd1bf2c07371f55dfdd59 494 Gene3D G3DSA:3.30.70.270 106 364 4.4E-31 T 28-03-2018 AM393_RS01760 9b529810209dd1bf2c07371f55dfdd59 494 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 80 450 7.5E-113 T 28-03-2018 IPR030931 Group II intron reverse transcriptase/maturase AM393_RS01760 9b529810209dd1bf2c07371f55dfdd59 494 SUPERFAMILY SSF56672 54 414 2.6E-63 T 28-03-2018 AM393_RS01760 9b529810209dd1bf2c07371f55dfdd59 494 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 134 364 7.5E-51 T 28-03-2018 IPR000477 Reverse transcriptase domain AM393_RS19435 9b529810209dd1bf2c07371f55dfdd59 494 Gene3D G3DSA:3.30.70.270 106 364 4.4E-31 T 28-03-2018 AM393_RS19435 9b529810209dd1bf2c07371f55dfdd59 494 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 80 450 7.5E-113 T 28-03-2018 IPR030931 Group II intron reverse transcriptase/maturase AM393_RS19435 9b529810209dd1bf2c07371f55dfdd59 494 SUPERFAMILY SSF56672 54 414 2.6E-63 T 28-03-2018 AM393_RS19435 9b529810209dd1bf2c07371f55dfdd59 494 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 134 364 7.5E-51 T 28-03-2018 IPR000477 Reverse transcriptase domain AM393_RS15005 f8c4d6d7f6ef2880e40db873e9f46ad7 865 Pfam PF00330 Aconitase family (aconitate hydratase) 472 818 1.3E-38 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM393_RS15005 f8c4d6d7f6ef2880e40db873e9f46ad7 865 Gene3D G3DSA:3.20.19.10 162 363 3.7E-34 T 28-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AM393_RS15005 f8c4d6d7f6ef2880e40db873e9f46ad7 865 Pfam PF06434 Aconitate hydratase 2 N-terminus 168 382 4.2E-98 T 28-03-2018 IPR015929 Aconitase B, swivel GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 AM393_RS15005 f8c4d6d7f6ef2880e40db873e9f46ad7 865 PIRSF PIRSF036687 1 859 0.0 T 28-03-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 AM393_RS15005 f8c4d6d7f6ef2880e40db873e9f46ad7 865 SUPERFAMILY SSF52016 162 371 2.88E-72 T 28-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AM393_RS15005 f8c4d6d7f6ef2880e40db873e9f46ad7 865 SUPERFAMILY SSF53732 379 859 2.35E-149 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM393_RS15005 f8c4d6d7f6ef2880e40db873e9f46ad7 865 ProSitePatterns PS00450 Aconitase family signature 1. 702 719 - T 28-03-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 AM393_RS15005 f8c4d6d7f6ef2880e40db873e9f46ad7 865 Gene3D G3DSA:3.40.1060.10 521 682 1.1E-26 T 28-03-2018 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33 AM393_RS15005 f8c4d6d7f6ef2880e40db873e9f46ad7 865 Gene3D G3DSA:3.30.499.10 683 865 3.8E-53 T 28-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 AM393_RS15005 f8c4d6d7f6ef2880e40db873e9f46ad7 865 Pfam PF11791 Aconitate B N-terminal domain 4 156 7.9E-68 T 28-03-2018 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 AM393_RS15005 f8c4d6d7f6ef2880e40db873e9f46ad7 865 Gene3D G3DSA:3.30.499.10 402 520 4.2E-10 T 28-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 AM393_RS15005 f8c4d6d7f6ef2880e40db873e9f46ad7 865 ProSitePatterns PS01244 Aconitase family signature 2. 761 774 - T 28-03-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 AM393_RS15005 f8c4d6d7f6ef2880e40db873e9f46ad7 865 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 1 854 0.0 T 28-03-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 AM393_RS15005 f8c4d6d7f6ef2880e40db873e9f46ad7 865 SUPERFAMILY SSF74778 2 160 1.14E-68 T 28-03-2018 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 AM393_RS17910 a40438c1f3ae9dfd5ca7eb676166c8f6 201 SUPERFAMILY SSF52833 1 83 8.24E-15 T 28-03-2018 IPR012336 Thioredoxin-like fold AM393_RS17910 a40438c1f3ae9dfd5ca7eb676166c8f6 201 SUPERFAMILY SSF47616 79 198 7.73E-6 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like AM393_RS17910 a40438c1f3ae9dfd5ca7eb676166c8f6 201 Gene3D G3DSA:3.40.30.10 1 85 2.1E-13 T 28-03-2018 AM393_RS17910 a40438c1f3ae9dfd5ca7eb676166c8f6 201 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 75 8.7E-15 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AM393_RS17910 a40438c1f3ae9dfd5ca7eb676166c8f6 201 Gene3D G3DSA:1.20.1050.10 86 199 7.6E-10 T 28-03-2018 AM393_RS20815 87ae99f8bb60486ca55c3cf58f229e05 275 Gene3D G3DSA:3.90.1200.10 45 274 4.5E-20 T 28-03-2018 AM393_RS20815 87ae99f8bb60486ca55c3cf58f229e05 275 Pfam PF01636 Phosphotransferase enzyme family 30 221 1.0E-12 T 28-03-2018 IPR002575 Aminoglycoside phosphotransferase AM393_RS20815 87ae99f8bb60486ca55c3cf58f229e05 275 Hamap MF_01604 Thiamine kinase [thiK]. 2 269 39.77 T 28-03-2018 IPR014093 Thiamine kinase GO:0006772|GO:0016310|GO:0019165 KEGG: 00730+2.7.1.89|MetaCyc: PWY-6896 AM393_RS20815 87ae99f8bb60486ca55c3cf58f229e05 275 SUPERFAMILY SSF56112 12 255 1.14E-28 T 28-03-2018 IPR011009 Protein kinase-like domain AM393_RS08525 4377b9934cc5c86c661522601c5e2ea0 253 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 126 205 8.8E-11 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM393_RS08525 4377b9934cc5c86c661522601c5e2ea0 253 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 7 18 3.7E-13 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM393_RS08525 4377b9934cc5c86c661522601c5e2ea0 253 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 173 193 3.7E-13 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM393_RS08525 4377b9934cc5c86c661522601c5e2ea0 253 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 155 171 3.7E-13 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM393_RS08525 4377b9934cc5c86c661522601c5e2ea0 253 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 124 137 3.7E-13 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM393_RS08525 4377b9934cc5c86c661522601c5e2ea0 253 SUPERFAMILY SSF56784 4 240 1.24E-57 T 28-03-2018 IPR023214 HAD-like domain AM393_RS08525 4377b9934cc5c86c661522601c5e2ea0 253 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 89 210 1.7E-13 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM393_RS08525 4377b9934cc5c86c661522601c5e2ea0 253 Gene3D G3DSA:3.40.50.1000 101 248 6.5E-36 T 28-03-2018 IPR023214 HAD-like domain AM393_RS08525 4377b9934cc5c86c661522601c5e2ea0 253 Hamap MF_00495 Phosphoglycolate phosphatase [gph]. 7 241 35.77 T 28-03-2018 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 AM393_RS08525 4377b9934cc5c86c661522601c5e2ea0 253 Gene3D G3DSA:3.40.50.1000 4 33 0.13 T 28-03-2018 IPR023214 HAD-like domain AM393_RS08525 4377b9934cc5c86c661522601c5e2ea0 253 Gene3D G3DSA:1.10.150.240 34 100 2.5E-22 T 28-03-2018 IPR023198 Phosphoglycolate phosphatase, domain 2 AM393_RS08525 4377b9934cc5c86c661522601c5e2ea0 253 Pfam PF13419 Haloacid dehalogenase-like hydrolase 10 209 3.0E-35 T 28-03-2018 IPR023214 HAD-like domain AM393_RS08525 4377b9934cc5c86c661522601c5e2ea0 253 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 10 240 3.0E-91 T 28-03-2018 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 AM393_RS21365 92468de25b4a2041459359f151022f31 648 Gene3D G3DSA:1.10.460.10 483 613 1.2E-16 T 28-03-2018 AM393_RS21365 92468de25b4a2041459359f151022f31 648 Pfam PF01751 Toprim domain 3 135 1.1E-16 T 28-03-2018 IPR006171 TOPRIM domain AM393_RS21365 92468de25b4a2041459359f151022f31 648 Hamap MF_00953 DNA topoisomerase 3 [topB]. 1 643 68.405 T 28-03-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 AM393_RS21365 92468de25b4a2041459359f151022f31 648 TIGRFAM TIGR01056 topB: DNA topoisomerase III 1 627 2.1E-293 T 28-03-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 AM393_RS21365 92468de25b4a2041459359f151022f31 648 Gene3D G3DSA:1.10.460.10 157 366 2.6E-39 T 28-03-2018 AM393_RS21365 92468de25b4a2041459359f151022f31 648 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 402 418 1.2E-25 T 28-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AM393_RS21365 92468de25b4a2041459359f151022f31 648 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 323 332 1.2E-25 T 28-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AM393_RS21365 92468de25b4a2041459359f151022f31 648 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 193 211 1.2E-25 T 28-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AM393_RS21365 92468de25b4a2041459359f151022f31 648 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 521 535 1.2E-25 T 28-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AM393_RS21365 92468de25b4a2041459359f151022f31 648 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 98 111 1.2E-25 T 28-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AM393_RS21365 92468de25b4a2041459359f151022f31 648 SMART SM00436 128 223 1.9E-36 T 28-03-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 AM393_RS21365 92468de25b4a2041459359f151022f31 648 SMART SM00493 1 124 9.3E-29 T 28-03-2018 IPR006171 TOPRIM domain AM393_RS21365 92468de25b4a2041459359f151022f31 648 Gene3D G3DSA:2.70.20.10 367 482 2.1E-23 T 28-03-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 AM393_RS21365 92468de25b4a2041459359f151022f31 648 SUPERFAMILY SSF56712 1 607 4.97E-186 T 28-03-2018 IPR023405 DNA topoisomerase, type IA, core domain AM393_RS21365 92468de25b4a2041459359f151022f31 648 SMART SM00437 280 558 4.0E-107 T 28-03-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 AM393_RS21365 92468de25b4a2041459359f151022f31 648 Gene3D G3DSA:3.40.50.140 1 156 6.0E-40 T 28-03-2018 AM393_RS21365 92468de25b4a2041459359f151022f31 648 Pfam PF01131 DNA topoisomerase 158 593 4.5E-112 T 28-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AM393_RS21365 92468de25b4a2041459359f151022f31 648 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 317 332 - T 28-03-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 AM393_RS28655 58b5656cdecb74421a15127d681533b7 190 SMART SM00857 3 139 1.9E-49 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AM393_RS28655 58b5656cdecb74421a15127d681533b7 190 ProSitePatterns PS00397 Site-specific recombinases active site. 6 14 - T 28-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 AM393_RS28655 58b5656cdecb74421a15127d681533b7 190 Pfam PF00239 Resolvase, N terminal domain 4 137 3.0E-40 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AM393_RS28655 58b5656cdecb74421a15127d681533b7 190 Gene3D G3DSA:1.20.5.40 109 137 1.3E-12 T 28-03-2018 AM393_RS28655 58b5656cdecb74421a15127d681533b7 190 SUPERFAMILY SSF46689 141 181 2.06E-9 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS28655 58b5656cdecb74421a15127d681533b7 190 Pfam PF02796 Helix-turn-helix domain of resolvase 141 181 7.2E-13 T 28-03-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 AM393_RS28655 58b5656cdecb74421a15127d681533b7 190 Gene3D G3DSA:1.10.10.60 139 183 2.1E-11 T 28-03-2018 AM393_RS28655 58b5656cdecb74421a15127d681533b7 190 ProSitePatterns PS00398 Site-specific recombinases signature 2. 58 70 - T 28-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 AM393_RS28655 58b5656cdecb74421a15127d681533b7 190 SUPERFAMILY SSF53041 1 138 4.05E-42 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AM393_RS28655 58b5656cdecb74421a15127d681533b7 190 Gene3D G3DSA:3.40.50.1390 1 108 9.2E-36 T 28-03-2018 AM393_RS23030 af7cfa689c286ade6034d8f7c3f69214 450 Gene3D G3DSA:1.10.40.30 369 440 9.7E-22 T 28-03-2018 AM393_RS23030 af7cfa689c286ade6034d8f7c3f69214 450 Pfam PF00206 Lyase 11 297 3.1E-53 T 28-03-2018 IPR022761 Fumarate lyase, N-terminal AM393_RS23030 af7cfa689c286ade6034d8f7c3f69214 450 Gene3D G3DSA:1.20.200.10 101 368 1.7E-77 T 28-03-2018 AM393_RS23030 af7cfa689c286ade6034d8f7c3f69214 450 TIGRFAM TIGR02426 protocat_pcaB: 3-carboxy-cis,cis-muconate cycloisomerase 10 345 3.7E-124 T 28-03-2018 IPR012789 3-carboxy-cis,cis-muconate cycloisomerase GO:0019619|GO:0047472 KEGG: 00362+5.5.1.2 AM393_RS23030 af7cfa689c286ade6034d8f7c3f69214 450 SMART SM00998 361 440 2.2E-23 T 28-03-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AM393_RS23030 af7cfa689c286ade6034d8f7c3f69214 450 PRINTS PR00149 Fumarate lyase superfamily signature 143 161 3.4E-22 T 28-03-2018 IPR000362 Fumarate lyase family AM393_RS23030 af7cfa689c286ade6034d8f7c3f69214 450 PRINTS PR00149 Fumarate lyase superfamily signature 228 255 3.4E-22 T 28-03-2018 IPR000362 Fumarate lyase family AM393_RS23030 af7cfa689c286ade6034d8f7c3f69214 450 PRINTS PR00149 Fumarate lyase superfamily signature 273 289 3.4E-22 T 28-03-2018 IPR000362 Fumarate lyase family AM393_RS23030 af7cfa689c286ade6034d8f7c3f69214 450 PRINTS PR00149 Fumarate lyase superfamily signature 98 116 3.4E-22 T 28-03-2018 IPR000362 Fumarate lyase family AM393_RS23030 af7cfa689c286ade6034d8f7c3f69214 450 SUPERFAMILY SSF48557 9 446 5.34E-113 T 28-03-2018 IPR008948 L-Aspartase-like GO:0003824 AM393_RS23030 af7cfa689c286ade6034d8f7c3f69214 450 PRINTS PR00145 Argininosuccinate lyase family signature 273 289 1.2E-10 T 28-03-2018 AM393_RS23030 af7cfa689c286ade6034d8f7c3f69214 450 PRINTS PR00145 Argininosuccinate lyase family signature 138 158 1.2E-10 T 28-03-2018 AM393_RS23030 af7cfa689c286ade6034d8f7c3f69214 450 PRINTS PR00145 Argininosuccinate lyase family signature 97 119 1.2E-10 T 28-03-2018 AM393_RS23030 af7cfa689c286ade6034d8f7c3f69214 450 PRINTS PR00145 Argininosuccinate lyase family signature 228 252 1.2E-10 T 28-03-2018 AM393_RS23030 af7cfa689c286ade6034d8f7c3f69214 450 Gene3D G3DSA:1.10.275.10 1 100 1.3E-17 T 28-03-2018 IPR024083 Fumarase/histidase, N-terminal AM393_RS23030 af7cfa689c286ade6034d8f7c3f69214 450 Pfam PF10397 Adenylosuccinate lyase C-terminus 362 439 3.6E-17 T 28-03-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AM393_RS23030 af7cfa689c286ade6034d8f7c3f69214 450 ProSitePatterns PS00163 Fumarate lyases signature. 273 282 - T 28-03-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 AM393_RS01360 b34c86608db19aae59b45828b46d059c 341 Gene3D G3DSA:3.40.50.300 156 315 1.1E-6 T 28-03-2018 AM393_RS01360 b34c86608db19aae59b45828b46d059c 341 Gene3D G3DSA:3.30.450.90 12 113 1.2E-19 T 28-03-2018 AM393_RS01360 b34c86608db19aae59b45828b46d059c 341 Pfam PF00437 Type II/IV secretion system protein 19 279 6.1E-40 T 28-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 AM393_RS01360 b34c86608db19aae59b45828b46d059c 341 SUPERFAMILY SSF52540 16 319 4.76E-41 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS01360 b34c86608db19aae59b45828b46d059c 341 TIGRFAM TIGR02788 VirB11: P-type DNA transfer ATPase VirB11 19 327 1.4E-89 T 28-03-2018 IPR014155 Type IV secretion system protein VirB11 GO:0005737|GO:0006810|GO:0009405 AM393_RS05530 eba6e5f616f219971bf211608d621aea 428 Gene3D G3DSA:3.40.190.10 189 366 1.0E-5 T 28-03-2018 AM393_RS05530 eba6e5f616f219971bf211608d621aea 428 SUPERFAMILY SSF53850 24 423 2.54E-63 T 28-03-2018 AM393_RS05530 eba6e5f616f219971bf211608d621aea 428 Gene3D G3DSA:3.40.190.10 17 188 3.6E-32 T 28-03-2018 AM393_RS05530 eba6e5f616f219971bf211608d621aea 428 Pfam PF01547 Bacterial extracellular solute-binding protein 45 331 6.5E-29 T 28-03-2018 IPR006059 Solute-binding family 1 GO:0006810 AM393_RS25010 a83d91824be4643ce86fb9582569eab3 75 SUPERFAMILY SSF55331 2 74 4.93E-19 T 28-03-2018 IPR014347 Tautomerase/MIF superfamily AM393_RS25010 a83d91824be4643ce86fb9582569eab3 75 Pfam PF01361 Tautomerase enzyme 2 54 2.4E-14 T 28-03-2018 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 AM393_RS25010 a83d91824be4643ce86fb9582569eab3 75 PIRSF PIRSF037799 1 75 4.2E-30 T 28-03-2018 IPR017284 Tautomerase PptA GO:0005737|GO:0016862 AM393_RS25010 a83d91824be4643ce86fb9582569eab3 75 Gene3D G3DSA:3.30.429.10 2 65 1.0E-17 T 28-03-2018 AM393_RS25010 a83d91824be4643ce86fb9582569eab3 75 Hamap MF_00718 Tautomerase PptA [pptA]. 1 75 28.783 T 28-03-2018 IPR017284 Tautomerase PptA GO:0005737|GO:0016862 AM393_RS08425 9ddec46560064d6258a577b3c6eb7010 634 Gene3D G3DSA:3.40.50.300 308 563 8.2E-51 T 28-03-2018 AM393_RS08425 9ddec46560064d6258a577b3c6eb7010 634 ProSitePatterns PS00211 ABC transporters family signature. 431 445 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS08425 9ddec46560064d6258a577b3c6eb7010 634 Pfam PF00005 ABC transporter 17 178 7.1E-23 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS08425 9ddec46560064d6258a577b3c6eb7010 634 Pfam PF00005 ABC transporter 328 459 1.7E-25 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS08425 9ddec46560064d6258a577b3c6eb7010 634 SMART SM00382 337 506 1.8E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS08425 9ddec46560064d6258a577b3c6eb7010 634 SMART SM00382 26 223 5.8E-15 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS08425 9ddec46560064d6258a577b3c6eb7010 634 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS08425 9ddec46560064d6258a577b3c6eb7010 634 Gene3D G3DSA:1.10.287.380 564 618 8.5E-4 T 28-03-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 AM393_RS08425 9ddec46560064d6258a577b3c6eb7010 634 Pfam PF12848 ABC transporter 217 297 4.7E-29 T 28-03-2018 IPR032781 ABC-transporter extension domain AM393_RS08425 9ddec46560064d6258a577b3c6eb7010 634 Gene3D G3DSA:3.40.50.300 2 279 3.6E-53 T 28-03-2018 AM393_RS08425 9ddec46560064d6258a577b3c6eb7010 634 SUPERFAMILY SSF52540 119 253 2.3E-46 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS08425 9ddec46560064d6258a577b3c6eb7010 634 SUPERFAMILY SSF52540 2 92 2.3E-46 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS08425 9ddec46560064d6258a577b3c6eb7010 634 SUPERFAMILY SSF52540 294 516 2.02E-47 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS00720 c94c8b31ec6f00a9500b8da641116153 272 SUPERFAMILY SSF117396 1 252 2.09E-64 T 28-03-2018 IPR002763 Protein of unknown function DUF72 AM393_RS00720 c94c8b31ec6f00a9500b8da641116153 272 Pfam PF01904 Protein of unknown function DUF72 21 248 1.6E-50 T 28-03-2018 IPR002763 Protein of unknown function DUF72 AM393_RS00720 c94c8b31ec6f00a9500b8da641116153 272 Gene3D G3DSA:3.20.20.410 1 256 3.2E-59 T 28-03-2018 IPR002763 Protein of unknown function DUF72 AM393_RS10520 971c0d3f5039c382354b2c8e3ab61801 156 Gene3D G3DSA:1.20.5.620 62 122 1.2E-15 T 28-03-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain AM393_RS10520 971c0d3f5039c382354b2c8e3ab61801 156 Pfam PF00430 ATP synthase B/B' CF(0) 6 137 2.4E-40 T 28-03-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 AM393_RS10520 971c0d3f5039c382354b2c8e3ab61801 156 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 138 13.257 T 28-03-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 AM393_RS10520 971c0d3f5039c382354b2c8e3ab61801 156 SUPERFAMILY SSF81573 63 121 1.96E-15 T 28-03-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain AM393_RS10520 971c0d3f5039c382354b2c8e3ab61801 156 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 156 5.9E-62 T 28-03-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 AM393_RS12940 1e9eab64d041a9b9522e7f6e7eeabb48 149 SUPERFAMILY SSF55658 1 57 4.01E-19 T 28-03-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal AM393_RS12940 1e9eab64d041a9b9522e7f6e7eeabb48 149 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 149 25.489 T 28-03-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM393_RS12940 1e9eab64d041a9b9522e7f6e7eeabb48 149 Gene3D G3DSA:3.40.5.10 1 49 1.1E-22 T 28-03-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS12940 1e9eab64d041a9b9522e7f6e7eeabb48 149 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 148 1.9E-24 T 28-03-2018 IPR020069 Ribosomal protein L9, C-terminal AM393_RS12940 1e9eab64d041a9b9522e7f6e7eeabb48 149 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 45 5.4E-22 T 28-03-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS12940 1e9eab64d041a9b9522e7f6e7eeabb48 149 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 149 1.9E-57 T 28-03-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM393_RS12940 1e9eab64d041a9b9522e7f6e7eeabb48 149 SUPERFAMILY SSF55653 60 149 2.88E-25 T 28-03-2018 IPR020069 Ribosomal protein L9, C-terminal AM393_RS12940 1e9eab64d041a9b9522e7f6e7eeabb48 149 Gene3D G3DSA:3.10.430.100 63 148 4.8E-25 T 28-03-2018 IPR020069 Ribosomal protein L9, C-terminal AM393_RS12940 1e9eab64d041a9b9522e7f6e7eeabb48 149 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 28-03-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS10330 b8400c6063bf02118ca97e8c5f291b17 229 SUPERFAMILY SSF48008 98 227 6.54E-25 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AM393_RS10330 b8400c6063bf02118ca97e8c5f291b17 229 Gene3D G3DSA:1.10.10.10 2 70 1.4E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS10330 b8400c6063bf02118ca97e8c5f291b17 229 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 42 58 4.5E-5 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM393_RS10330 b8400c6063bf02118ca97e8c5f291b17 229 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 28 42 4.5E-5 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM393_RS10330 b8400c6063bf02118ca97e8c5f291b17 229 Pfam PF07729 FCD domain 99 218 9.4E-26 T 28-03-2018 IPR011711 GntR, C-terminal AM393_RS10330 b8400c6063bf02118ca97e8c5f291b17 229 Pfam PF00392 Bacterial regulatory proteins, gntR family 7 68 6.1E-15 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM393_RS10330 b8400c6063bf02118ca97e8c5f291b17 229 SUPERFAMILY SSF46785 4 72 1.38E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS10330 b8400c6063bf02118ca97e8c5f291b17 229 SMART SM00345 9 68 9.6E-12 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM393_RS10330 b8400c6063bf02118ca97e8c5f291b17 229 SMART SM00895 97 220 9.2E-18 T 28-03-2018 IPR011711 GntR, C-terminal AM393_RS10330 b8400c6063bf02118ca97e8c5f291b17 229 Gene3D G3DSA:1.20.120.530 84 229 5.2E-28 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AM393_RS09075 5f1b62082b3915226001328dacbf2c59 250 SUPERFAMILY SSF53335 10 246 4.35E-74 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM393_RS09075 5f1b62082b3915226001328dacbf2c59 250 Pfam PF04445 Putative SAM-dependent methyltransferase 19 246 1.9E-105 T 28-03-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 AM393_RS09075 5f1b62082b3915226001328dacbf2c59 250 Gene3D G3DSA:3.40.1630.10 3 56 1.2E-21 T 28-03-2018 AM393_RS09075 5f1b62082b3915226001328dacbf2c59 250 Gene3D G3DSA:3.40.50.150 57 250 1.3E-31 T 28-03-2018 AM393_RS09075 5f1b62082b3915226001328dacbf2c59 250 Hamap MF_01523 Ribosomal RNA small subunit methyltransferase J [rsmJ]. 3 248 37.798 T 28-03-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 AM393_RS15375 23b94cc64c9bf4b84c63498158e4eecf 151 SUPERFAMILY SSF54637 7 146 1.73E-51 T 28-03-2018 IPR029069 HotDog domain AM393_RS15375 23b94cc64c9bf4b84c63498158e4eecf 151 Pfam PF07977 FabA-like domain 17 141 8.9E-41 T 28-03-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AM393_RS15375 23b94cc64c9bf4b84c63498158e4eecf 151 Gene3D G3DSA:3.10.129.10 1 149 2.0E-56 T 28-03-2018 AM393_RS15375 23b94cc64c9bf4b84c63498158e4eecf 151 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 8 146 9.8E-61 T 28-03-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AM393_RS15375 23b94cc64c9bf4b84c63498158e4eecf 151 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 8 149 37.777 T 28-03-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AM393_RS28480 789f0981bac4caa2b144daf57c838cf1 184 Gene3D G3DSA:3.40.630.30 1 184 7.5E-33 T 28-03-2018 AM393_RS28480 789f0981bac4caa2b144daf57c838cf1 184 Pfam PF13523 Acetyltransferase (GNAT) domain 15 161 1.2E-40 T 28-03-2018 AM393_RS28480 789f0981bac4caa2b144daf57c838cf1 184 SUPERFAMILY SSF55729 5 175 2.13E-47 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM393_RS28480 789f0981bac4caa2b144daf57c838cf1 184 TIGRFAM TIGR04431 N6_acetyl_AAC6: aminoglycoside N(6')-acetyltransferase, AacA4 family 2 184 1.3E-116 T 28-03-2018 IPR030971 Aminoglycoside N(6')-acetyltransferase, AacA4 type AM393_RS19990 28d28804bf73df539d4206c9781686e5 95 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 1 94 30.637 T 28-03-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 AM393_RS19990 28d28804bf73df539d4206c9781686e5 95 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 1 94 2.8E-53 T 28-03-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 AM393_RS19990 28d28804bf73df539d4206c9781686e5 95 Gene3D G3DSA:4.10.520.10 1 93 4.7E-32 T 28-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 AM393_RS19990 28d28804bf73df539d4206c9781686e5 95 SUPERFAMILY SSF47729 1 91 6.92E-30 T 28-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 AM393_RS19990 28d28804bf73df539d4206c9781686e5 95 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 28-03-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 AM393_RS19990 28d28804bf73df539d4206c9781686e5 95 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 3.3E-19 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AM393_RS19990 28d28804bf73df539d4206c9781686e5 95 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 3.3E-19 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AM393_RS19990 28d28804bf73df539d4206c9781686e5 95 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 3.3E-19 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AM393_RS19990 28d28804bf73df539d4206c9781686e5 95 Pfam PF00216 Bacterial DNA-binding protein 1 91 3.0E-30 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AM393_RS19990 28d28804bf73df539d4206c9781686e5 95 SMART SM00411 1 91 1.6E-43 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AM393_RS27800 59551c66690166432546e4d1cf768530 225 SUPERFAMILY SSF48498 78 210 2.45E-35 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AM393_RS27800 59551c66690166432546e4d1cf768530 225 Pfam PF02909 Tetracyclin repressor, C-terminal all-alpha domain 78 210 1.4E-40 T 28-03-2018 IPR004111 Tetracycline transcriptional regulator, TetR, C-terminal GO:0045892 AM393_RS27800 59551c66690166432546e4d1cf768530 225 SUPERFAMILY SSF46689 16 74 8.72E-15 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS27800 59551c66690166432546e4d1cf768530 225 Gene3D G3DSA:1.10.260.40 45 71 5.7E-6 T 28-03-2018 AM393_RS27800 59551c66690166432546e4d1cf768530 225 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 64 1.4E-15 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM393_RS27800 59551c66690166432546e4d1cf768530 225 PRINTS PR00400 Tetracycline repressor protein signature 193 207 1.9E-51 T 28-03-2018 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 AM393_RS27800 59551c66690166432546e4d1cf768530 225 PRINTS PR00400 Tetracycline repressor protein signature 104 127 1.9E-51 T 28-03-2018 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 AM393_RS27800 59551c66690166432546e4d1cf768530 225 PRINTS PR00400 Tetracycline repressor protein signature 84 103 1.9E-51 T 28-03-2018 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 AM393_RS27800 59551c66690166432546e4d1cf768530 225 PRINTS PR00400 Tetracycline repressor protein signature 30 53 1.9E-51 T 28-03-2018 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 AM393_RS27800 59551c66690166432546e4d1cf768530 225 PRINTS PR00400 Tetracycline repressor protein signature 139 158 1.9E-51 T 28-03-2018 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 AM393_RS27800 59551c66690166432546e4d1cf768530 225 Gene3D G3DSA:1.10.10.60 13 44 7.8E-12 T 28-03-2018 AM393_RS27800 59551c66690166432546e4d1cf768530 225 Gene3D G3DSA:1.10.357.10 72 212 8.6E-26 T 28-03-2018 AM393_RS27800 59551c66690166432546e4d1cf768530 225 ProSitePatterns PS01081 TetR-type HTH domain signature. 30 61 - T 28-03-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AM393_RS27800 59551c66690166432546e4d1cf768530 225 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 18 31 2.7E-10 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM393_RS27800 59551c66690166432546e4d1cf768530 225 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 39 62 2.7E-10 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM393_RS08170 b115dc82f2c20f7463441afede8cc1c8 458 SUPERFAMILY SSF51735 232 376 3.48E-32 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS08170 b115dc82f2c20f7463441afede8cc1c8 458 Gene3D G3DSA:3.30.70.1450 367 458 4.3E-14 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AM393_RS08170 b115dc82f2c20f7463441afede8cc1c8 458 Gene3D G3DSA:3.30.70.1450 140 232 9.1E-14 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AM393_RS08170 b115dc82f2c20f7463441afede8cc1c8 458 Pfam PF02254 TrkA-N domain 3 112 6.5E-29 T 28-03-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AM393_RS08170 b115dc82f2c20f7463441afede8cc1c8 458 Pfam PF02254 TrkA-N domain 235 350 2.6E-26 T 28-03-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AM393_RS08170 b115dc82f2c20f7463441afede8cc1c8 458 Gene3D G3DSA:3.40.50.720 2 139 1.1E-26 T 28-03-2018 AM393_RS08170 b115dc82f2c20f7463441afede8cc1c8 458 Pfam PF02080 TrkA-C domain 390 451 4.0E-11 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AM393_RS08170 b115dc82f2c20f7463441afede8cc1c8 458 Pfam PF02080 TrkA-C domain 157 225 1.3E-10 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AM393_RS08170 b115dc82f2c20f7463441afede8cc1c8 458 Gene3D G3DSA:3.40.50.720 233 366 7.1E-24 T 28-03-2018 AM393_RS08170 b115dc82f2c20f7463441afede8cc1c8 458 PRINTS PR00335 TrkA potassium uptake protein signature 49 59 4.7E-36 T 28-03-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 AM393_RS08170 b115dc82f2c20f7463441afede8cc1c8 458 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 4.7E-36 T 28-03-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 AM393_RS08170 b115dc82f2c20f7463441afede8cc1c8 458 PRINTS PR00335 TrkA potassium uptake protein signature 60 70 4.7E-36 T 28-03-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 AM393_RS08170 b115dc82f2c20f7463441afede8cc1c8 458 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 4.7E-36 T 28-03-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 AM393_RS08170 b115dc82f2c20f7463441afede8cc1c8 458 PRINTS PR00335 TrkA potassium uptake protein signature 73 87 4.7E-36 T 28-03-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 AM393_RS08170 b115dc82f2c20f7463441afede8cc1c8 458 SUPERFAMILY SSF116726 148 226 1.1E-8 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AM393_RS08170 b115dc82f2c20f7463441afede8cc1c8 458 SUPERFAMILY SSF116726 390 451 1.7E-7 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AM393_RS08170 b115dc82f2c20f7463441afede8cc1c8 458 SUPERFAMILY SSF51735 1 152 2.75E-35 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS18880 fd3d5f1cde9c2482764123572d9cfb7a 272 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 267 3.4E-61 T 28-03-2018 IPR023214 HAD-like domain AM393_RS18880 fd3d5f1cde9c2482764123572d9cfb7a 272 ProSitePatterns PS01228 Hypothetical cof family signature 1. 5 16 - T 28-03-2018 AM393_RS18880 fd3d5f1cde9c2482764123572d9cfb7a 272 ProSitePatterns PS01229 Hypothetical cof family signature 2. 221 243 - T 28-03-2018 AM393_RS18880 fd3d5f1cde9c2482764123572d9cfb7a 272 SUPERFAMILY SSF56784 1 271 1.31E-62 T 28-03-2018 IPR023214 HAD-like domain AM393_RS18880 fd3d5f1cde9c2482764123572d9cfb7a 272 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 267 7.3E-65 T 28-03-2018 IPR000150 Cof family GO:0016787 AM393_RS18880 fd3d5f1cde9c2482764123572d9cfb7a 272 Gene3D G3DSA:3.40.50.1000 1 116 3.9E-18 T 28-03-2018 IPR023214 HAD-like domain AM393_RS18880 fd3d5f1cde9c2482764123572d9cfb7a 272 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 6 240 5.4E-22 T 28-03-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 AM393_RS18880 fd3d5f1cde9c2482764123572d9cfb7a 272 Gene3D G3DSA:3.40.50.1000 135 271 2.1E-22 T 28-03-2018 IPR023214 HAD-like domain AM393_RS23920 da33afbf070324a06ae7ab0663e25a9a 530 SMART SM00882 5 243 4.3E-56 T 28-03-2018 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 Reactome: R-HSA-77108 AM393_RS23920 da33afbf070324a06ae7ab0663e25a9a 530 SUPERFAMILY SSF100950 2 247 5.3E-74 T 28-03-2018 AM393_RS23920 da33afbf070324a06ae7ab0663e25a9a 530 Gene3D G3DSA:3.40.1080.10 276 525 1.6E-46 T 28-03-2018 AM393_RS23920 da33afbf070324a06ae7ab0663e25a9a 530 Pfam PF01144 Coenzyme A transferase 8 242 3.9E-28 T 28-03-2018 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 Reactome: R-HSA-77108 AM393_RS23920 da33afbf070324a06ae7ab0663e25a9a 530 PIRSF PIRSF000858 1 525 7.7E-175 T 28-03-2018 IPR014388 3-oxoacid CoA-transferase GO:0008410|GO:0046952 Reactome: R-HSA-77108 AM393_RS23920 da33afbf070324a06ae7ab0663e25a9a 530 Gene3D G3DSA:3.40.1080.10 1 269 3.4E-69 T 28-03-2018 AM393_RS23920 da33afbf070324a06ae7ab0663e25a9a 530 SUPERFAMILY SSF100950 277 519 3.72E-64 T 28-03-2018 AM393_RS13270 770539cba48cf5bf1fcfd2a87bcebe6b 334 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 7 147 6.4E-49 T 28-03-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 AM393_RS13270 770539cba48cf5bf1fcfd2a87bcebe6b 334 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 52 59 - T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AM393_RS13270 770539cba48cf5bf1fcfd2a87bcebe6b 334 SUPERFAMILY SSF53671 2 333 5.37E-99 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AM393_RS13270 770539cba48cf5bf1fcfd2a87bcebe6b 334 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 7 332 8.7E-136 T 28-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AM393_RS13270 770539cba48cf5bf1fcfd2a87bcebe6b 334 Gene3D G3DSA:3.40.50.1370 164 334 7.8E-51 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AM393_RS13270 770539cba48cf5bf1fcfd2a87bcebe6b 334 Gene3D G3DSA:3.40.50.1370 5 163 2.4E-57 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AM393_RS13270 770539cba48cf5bf1fcfd2a87bcebe6b 334 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 6 333 82.918 T 28-03-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 AM393_RS13270 770539cba48cf5bf1fcfd2a87bcebe6b 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 229 239 6.1E-32 T 28-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AM393_RS13270 770539cba48cf5bf1fcfd2a87bcebe6b 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 83 96 6.1E-32 T 28-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AM393_RS13270 770539cba48cf5bf1fcfd2a87bcebe6b 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 123 137 6.1E-32 T 28-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AM393_RS13270 770539cba48cf5bf1fcfd2a87bcebe6b 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 50 64 6.1E-32 T 28-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AM393_RS13270 770539cba48cf5bf1fcfd2a87bcebe6b 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 311 322 6.1E-32 T 28-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AM393_RS13270 770539cba48cf5bf1fcfd2a87bcebe6b 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 52 71 1.2E-25 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AM393_RS13270 770539cba48cf5bf1fcfd2a87bcebe6b 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 134 145 1.2E-25 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AM393_RS13270 770539cba48cf5bf1fcfd2a87bcebe6b 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 297 320 1.2E-25 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AM393_RS13270 770539cba48cf5bf1fcfd2a87bcebe6b 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 267 276 1.2E-25 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AM393_RS13270 770539cba48cf5bf1fcfd2a87bcebe6b 334 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 156 330 1.2E-53 T 28-03-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 AM393_RS28675 8638a2780b81bcce825d151af07009bc 214 SUPERFAMILY SSF141571 20 212 1.31E-41 T 28-03-2018 AM393_RS28675 8638a2780b81bcce825d151af07009bc 214 Pfam PF00805 Pentapeptide repeats (8 copies) 26 45 2.7E-4 T 28-03-2018 IPR001646 Pentapeptide repeat AM393_RS28675 8638a2780b81bcce825d151af07009bc 214 Pfam PF00805 Pentapeptide repeats (8 copies) 53 78 6.2E-4 T 28-03-2018 IPR001646 Pentapeptide repeat AM393_RS28675 8638a2780b81bcce825d151af07009bc 214 Pfam PF13599 Pentapeptide repeats (9 copies) 94 171 7.2E-16 T 28-03-2018 IPR001646 Pentapeptide repeat AM393_RS28675 8638a2780b81bcce825d151af07009bc 214 Gene3D G3DSA:2.160.20.80 1 214 4.5E-52 T 28-03-2018 AM393_RS24285 1518a79ca2301259a115c7e9dde17886 413 Gene3D G3DSA:3.90.1150.10 285 413 1.6E-31 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM393_RS24285 1518a79ca2301259a115c7e9dde17886 413 PIRSF PIRSF000524 8 412 1.5E-105 T 28-03-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661 AM393_RS24285 1518a79ca2301259a115c7e9dde17886 413 Pfam PF00266 Aminotransferase class-V 16 359 2.2E-26 T 28-03-2018 IPR000192 Aminotransferase class V domain AM393_RS24285 1518a79ca2301259a115c7e9dde17886 413 Gene3D G3DSA:3.40.640.10 12 284 1.8E-43 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM393_RS24285 1518a79ca2301259a115c7e9dde17886 413 SUPERFAMILY SSF53383 6 391 6.46E-91 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM393_RS25755 99e50fbfa3124c7f09df6e8f030399c4 299 Gene3D G3DSA:3.40.190.10 89 177 2.9E-21 T 28-03-2018 AM393_RS25755 99e50fbfa3124c7f09df6e8f030399c4 299 SUPERFAMILY SSF53850 85 295 4.27E-37 T 28-03-2018 AM393_RS25755 99e50fbfa3124c7f09df6e8f030399c4 299 SUPERFAMILY SSF46785 6 113 1.2E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS25755 99e50fbfa3124c7f09df6e8f030399c4 299 Gene3D G3DSA:1.10.10.10 5 88 3.4E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS25755 99e50fbfa3124c7f09df6e8f030399c4 299 Gene3D G3DSA:3.40.190.10 178 269 7.6E-17 T 28-03-2018 AM393_RS25755 99e50fbfa3124c7f09df6e8f030399c4 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 64 5.7E-17 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS25755 99e50fbfa3124c7f09df6e8f030399c4 299 Pfam PF03466 LysR substrate binding domain 90 292 9.6E-38 T 28-03-2018 IPR005119 LysR, substrate-binding AM393_RS10115 eea61429a4035f505489f60be7d379d1 459 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 357 452 0.002 T 28-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 AM393_RS10115 eea61429a4035f505489f60be7d379d1 459 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 108 207 9.0E-45 T 28-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 AM393_RS10115 eea61429a4035f505489f60be7d379d1 459 Pfam PF02264 LamB porin 82 459 1.4E-79 T 28-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 AM393_RS10115 eea61429a4035f505489f60be7d379d1 459 SUPERFAMILY SSF56935 80 459 3.02E-90 T 28-03-2018 AM393_RS10115 eea61429a4035f505489f60be7d379d1 459 Gene3D G3DSA:2.40.170.10 80 459 2.5E-79 T 28-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 AM393_RS04210 b0f0481935d232452e004076a9cd6971 99 SMART SM00418 16 95 1.1E-24 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM393_RS04210 b0f0481935d232452e004076a9cd6971 99 Gene3D G3DSA:1.10.10.10 2 96 8.6E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS04210 b0f0481935d232452e004076a9cd6971 99 Pfam PF01022 Bacterial regulatory protein, arsR family 23 70 1.9E-15 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM393_RS04210 b0f0481935d232452e004076a9cd6971 99 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 18 33 4.1E-9 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM393_RS04210 b0f0481935d232452e004076a9cd6971 99 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 51 66 4.1E-9 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM393_RS04210 b0f0481935d232452e004076a9cd6971 99 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 66 81 4.1E-9 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM393_RS04210 b0f0481935d232452e004076a9cd6971 99 SUPERFAMILY SSF46785 13 98 1.98E-25 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS07365 c5b03ae41edd70b60f93bf231d05f7e5 333 Pfam PF02661 Fic/DOC family 101 196 1.5E-20 T 28-03-2018 IPR003812 Fido domain AM393_RS07365 c5b03ae41edd70b60f93bf231d05f7e5 333 SUPERFAMILY SSF46785 273 330 2.86E-9 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS07365 c5b03ae41edd70b60f93bf231d05f7e5 333 SUPERFAMILY SSF140931 79 262 6.02E-41 T 28-03-2018 IPR003812 Fido domain AM393_RS07365 c5b03ae41edd70b60f93bf231d05f7e5 333 Gene3D G3DSA:1.10.3290.10 13 264 2.0E-51 T 28-03-2018 IPR003812 Fido domain AM393_RS07365 c5b03ae41edd70b60f93bf231d05f7e5 333 Pfam PF08279 HTH domain 278 327 3.5E-9 T 28-03-2018 IPR013196 Helix-turn-helix, type 11 AM393_RS07365 c5b03ae41edd70b60f93bf231d05f7e5 333 Gene3D G3DSA:1.10.10.10 265 333 2.2E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS12105 33070bcfda71669f94920e6466a7de47 471 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 27 464 3.7E-175 T 28-03-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 AM393_RS12105 33070bcfda71669f94920e6466a7de47 471 SMART SM00382 223 429 3.6E-4 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS12105 33070bcfda71669f94920e6466a7de47 471 Gene3D G3DSA:1.10.860.10 18 169 6.4E-49 T 28-03-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal AM393_RS12105 33070bcfda71669f94920e6466a7de47 471 Pfam PF03796 DnaB-like helicase C terminal domain 206 462 3.4E-111 T 28-03-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 AM393_RS12105 33070bcfda71669f94920e6466a7de47 471 Gene3D G3DSA:3.40.50.300 187 471 3.4E-64 T 28-03-2018 AM393_RS12105 33070bcfda71669f94920e6466a7de47 471 SUPERFAMILY SSF48024 25 136 1.23E-39 T 28-03-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 AM393_RS12105 33070bcfda71669f94920e6466a7de47 471 SUPERFAMILY SSF52540 204 275 4.7E-52 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS12105 33070bcfda71669f94920e6466a7de47 471 SUPERFAMILY SSF52540 302 456 4.7E-52 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS12105 33070bcfda71669f94920e6466a7de47 471 Pfam PF00772 DnaB-like helicase N terminal domain 27 128 3.1E-37 T 28-03-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 AM393_RS01945 d31babfc33a4e5ad5788d1fb710abeab 333 Pfam PF00356 Bacterial regulatory proteins, lacI family 5 53 8.2E-16 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM393_RS01945 d31babfc33a4e5ad5788d1fb710abeab 333 Gene3D G3DSA:3.40.50.2300 59 176 3.3E-22 T 28-03-2018 AM393_RS01945 d31babfc33a4e5ad5788d1fb710abeab 333 SUPERFAMILY SSF53822 64 329 2.78E-29 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AM393_RS01945 d31babfc33a4e5ad5788d1fb710abeab 333 ProSitePatterns PS00356 LacI-type HTH domain signature. 6 24 - T 28-03-2018 AM393_RS01945 d31babfc33a4e5ad5788d1fb710abeab 333 Gene3D G3DSA:3.40.50.2300 177 316 2.9E-16 T 28-03-2018 AM393_RS01945 d31babfc33a4e5ad5788d1fb710abeab 333 Pfam PF13407 Periplasmic binding protein domain 67 275 4.7E-12 T 28-03-2018 IPR025997 Periplasmic binding protein AM393_RS01945 d31babfc33a4e5ad5788d1fb710abeab 333 SMART SM00354 3 76 6.4E-28 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM393_RS01945 d31babfc33a4e5ad5788d1fb710abeab 333 SUPERFAMILY SSF47413 4 61 2.18E-12 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM393_RS01945 d31babfc33a4e5ad5788d1fb710abeab 333 Gene3D G3DSA:1.10.260.40 4 58 2.5E-14 T 28-03-2018 AM393_RS18270 e6fcb635db65c6a269fab6bca3205802 262 Pfam PF00795 Carbon-nitrogen hydrolase 3 245 1.4E-36 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AM393_RS18270 e6fcb635db65c6a269fab6bca3205802 262 SUPERFAMILY SSF56317 1 257 1.7E-61 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AM393_RS18270 e6fcb635db65c6a269fab6bca3205802 262 Gene3D G3DSA:3.60.110.10 1 260 1.3E-63 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AM393_RS18270 e6fcb635db65c6a269fab6bca3205802 262 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 143 163 - T 28-03-2018 IPR001110 Uncharacterised protein family UPF0012, conserved site AM393_RS20435 5bff243fc3447c41438cfda06383534d 440 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 27 423 2.8E-116 T 28-03-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 AM393_RS20435 5bff243fc3447c41438cfda06383534d 440 Pfam PF00860 Permease family 30 400 2.8E-100 T 28-03-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 AM393_RS20435 5bff243fc3447c41438cfda06383534d 440 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 348 368 - T 28-03-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 AM393_RS20435 5bff243fc3447c41438cfda06383534d 440 TIGRFAM TIGR03616 RutG: pyrimidine utilization transport protein G 1 427 5.4E-245 T 28-03-2018 IPR019918 Pyrimidine permease RutG, predicted GO:0006864|GO:0015218 AM393_RS21335 053aa42054016ae79d40cfe9a0184379 617 SUPERFAMILY SSF52096 323 439 2.12E-43 T 28-03-2018 IPR029045 ClpP/crotonase-like domain AM393_RS21335 053aa42054016ae79d40cfe9a0184379 617 SUPERFAMILY SSF52096 467 529 2.12E-43 T 28-03-2018 IPR029045 ClpP/crotonase-like domain AM393_RS21335 053aa42054016ae79d40cfe9a0184379 617 PIRSF PIRSF001217 8 617 8.0E-229 T 28-03-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 AM393_RS21335 053aa42054016ae79d40cfe9a0184379 617 SUPERFAMILY SSF52096 34 180 7.75E-30 T 28-03-2018 IPR029045 ClpP/crotonase-like domain AM393_RS21335 053aa42054016ae79d40cfe9a0184379 617 SUPERFAMILY SSF52096 211 286 7.75E-30 T 28-03-2018 IPR029045 ClpP/crotonase-like domain AM393_RS21335 053aa42054016ae79d40cfe9a0184379 617 Gene3D G3DSA:3.90.226.10 318 611 8.7E-52 T 28-03-2018 AM393_RS21335 053aa42054016ae79d40cfe9a0184379 617 Pfam PF01343 Peptidase family S49 391 542 2.1E-51 T 28-03-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 AM393_RS21335 053aa42054016ae79d40cfe9a0184379 617 Pfam PF01343 Peptidase family S49 140 296 7.2E-44 T 28-03-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 AM393_RS21335 053aa42054016ae79d40cfe9a0184379 617 Gene3D G3DSA:3.40.1750.10 199 292 1.8E-24 T 28-03-2018 AM393_RS21335 053aa42054016ae79d40cfe9a0184379 617 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 327 540 1.2E-53 T 28-03-2018 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 AM393_RS21335 053aa42054016ae79d40cfe9a0184379 617 Gene3D G3DSA:3.20.20.80 21 198 0.04 T 28-03-2018 AM393_RS21335 053aa42054016ae79d40cfe9a0184379 617 TIGRFAM TIGR00705 SppA_67K: signal peptide peptidase SppA, 67K type 16 608 1.6E-260 T 28-03-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 AM393_RS23715 0cc459745dc28ae5e73996da96d9acf9 103 Pfam PF06052 3-hydroxyanthranilic acid dioxygenase 39 100 4.3E-5 T 28-03-2018 IPR010329 3-hydroxyanthranilic acid dioxygenase GO:0000334|GO:0005506|GO:0055114 KEGG: 00380+1.13.11.6|MetaCyc: PWY-5647|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-6505|Reactome: R-HSA-71240 AM393_RS23715 0cc459745dc28ae5e73996da96d9acf9 103 Gene3D G3DSA:2.60.120.10 2 102 4.7E-9 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AM393_RS23715 0cc459745dc28ae5e73996da96d9acf9 103 SUPERFAMILY SSF51182 20 97 3.13E-11 T 28-03-2018 IPR011051 RmlC-like cupin domain AM393_RS13630 22026cf81e6c08e17d8361b3d9d800af 177 ProSitePatterns PS00213 Lipocalin signature. 33 46 - T 28-03-2018 IPR022272 Lipocalin family conserved site AM393_RS13630 22026cf81e6c08e17d8361b3d9d800af 177 PIRSF PIRSF036893 2 177 1.2E-48 T 28-03-2018 IPR022271 Lipocalin, ApoD type AM393_RS13630 22026cf81e6c08e17d8361b3d9d800af 177 Gene3D G3DSA:2.40.128.20 2 176 2.0E-43 T 28-03-2018 IPR012674 Calycin AM393_RS13630 22026cf81e6c08e17d8361b3d9d800af 177 SUPERFAMILY SSF50814 12 176 8.11E-49 T 28-03-2018 IPR012674 Calycin AM393_RS13630 22026cf81e6c08e17d8361b3d9d800af 177 PRINTS PR01171 Bacterial lipocalin signature 51 67 4.9E-44 T 28-03-2018 IPR002446 Lipocalin, bacterial GO:0005215 AM393_RS13630 22026cf81e6c08e17d8361b3d9d800af 177 PRINTS PR01171 Bacterial lipocalin signature 70 79 4.9E-44 T 28-03-2018 IPR002446 Lipocalin, bacterial GO:0005215 AM393_RS13630 22026cf81e6c08e17d8361b3d9d800af 177 PRINTS PR01171 Bacterial lipocalin signature 104 118 4.9E-44 T 28-03-2018 IPR002446 Lipocalin, bacterial GO:0005215 AM393_RS13630 22026cf81e6c08e17d8361b3d9d800af 177 PRINTS PR01171 Bacterial lipocalin signature 163 173 4.9E-44 T 28-03-2018 IPR002446 Lipocalin, bacterial GO:0005215 AM393_RS13630 22026cf81e6c08e17d8361b3d9d800af 177 PRINTS PR01171 Bacterial lipocalin signature 136 147 4.9E-44 T 28-03-2018 IPR002446 Lipocalin, bacterial GO:0005215 AM393_RS13630 22026cf81e6c08e17d8361b3d9d800af 177 PRINTS PR01171 Bacterial lipocalin signature 121 129 4.9E-44 T 28-03-2018 IPR002446 Lipocalin, bacterial GO:0005215 AM393_RS13630 22026cf81e6c08e17d8361b3d9d800af 177 PRINTS PR01171 Bacterial lipocalin signature 34 48 4.9E-44 T 28-03-2018 IPR002446 Lipocalin, bacterial GO:0005215 AM393_RS13630 22026cf81e6c08e17d8361b3d9d800af 177 Pfam PF08212 Lipocalin-like domain 35 174 6.8E-45 T 28-03-2018 IPR000566 Lipocalin/cytosolic fatty-acid binding domain AM393_RS26205 aabd10771c6ca62685cd55238356304d 314 SUPERFAMILY SSF53213 5 185 4.05E-71 T 28-03-2018 AM393_RS26205 aabd10771c6ca62685cd55238356304d 314 SUPERFAMILY SSF53213 230 309 4.05E-71 T 28-03-2018 AM393_RS26205 aabd10771c6ca62685cd55238356304d 314 Gene3D G3DSA:3.40.830.10 3 313 1.1E-48 T 28-03-2018 AM393_RS26205 aabd10771c6ca62685cd55238356304d 314 Hamap MF_01653 2,3-dihydroxyphenylpropionate/2,3-dihydroxicinnamic acid 1,2-dioxygenase [mhpB]. 1 313 54.139 T 28-03-2018 IPR023789 2,3-dihydroxyphenylpropionate/2,3-dihydroxicinnamic acid 1,2-dioxygenase GO:0005506|GO:0019439|GO:0047070|GO:0055114 KEGG: 00360+1.13.11.16|MetaCyc: PWY-6690 AM393_RS26205 aabd10771c6ca62685cd55238356304d 314 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 4 306 2.1E-82 T 28-03-2018 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 AM393_RS14965 17a450864d674a49eb5d8adff80d7175 259 SMART SM00895 99 227 2.1E-16 T 28-03-2018 IPR011711 GntR, C-terminal AM393_RS14965 17a450864d674a49eb5d8adff80d7175 259 Pfam PF07729 FCD domain 99 226 2.1E-17 T 28-03-2018 IPR011711 GntR, C-terminal AM393_RS14965 17a450864d674a49eb5d8adff80d7175 259 SUPERFAMILY SSF48008 95 234 6.28E-20 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AM393_RS14965 17a450864d674a49eb5d8adff80d7175 259 SMART SM00345 15 74 3.0E-29 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM393_RS14965 17a450864d674a49eb5d8adff80d7175 259 SUPERFAMILY SSF46785 6 77 3.8E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS14965 17a450864d674a49eb5d8adff80d7175 259 Gene3D G3DSA:1.20.120.530 79 245 5.1E-23 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AM393_RS14965 17a450864d674a49eb5d8adff80d7175 259 Gene3D G3DSA:1.10.10.10 2 76 5.4E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS14965 17a450864d674a49eb5d8adff80d7175 259 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 74 1.6E-25 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM393_RS14965 17a450864d674a49eb5d8adff80d7175 259 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 3.0E-11 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM393_RS14965 17a450864d674a49eb5d8adff80d7175 259 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 3.0E-11 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM393_RS23720 7c307dd74ad6aafc4e7e2fe6cf5e372e 251 Gene3D G3DSA:3.10.180.10 1 147 1.7E-13 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM393_RS23720 7c307dd74ad6aafc4e7e2fe6cf5e372e 251 Gene3D G3DSA:3.10.180.10 148 246 8.2E-4 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM393_RS23720 7c307dd74ad6aafc4e7e2fe6cf5e372e 251 SUPERFAMILY SSF54593 2 223 1.72E-12 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM393_RS23720 7c307dd74ad6aafc4e7e2fe6cf5e372e 251 Pfam PF13468 Glyoxalase-like domain 6 197 6.0E-39 T 28-03-2018 IPR025870 Glyoxalase-like domain AM393_RS09785 2e1a7a820dca6bf8ca636bac26f9fdb1 558 SMART SM00532 28 425 2.2E-65 T 28-03-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 AM393_RS09785 2e1a7a820dca6bf8ca636bac26f9fdb1 558 SUPERFAMILY SSF50249 311 388 5.82E-15 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM393_RS09785 2e1a7a820dca6bf8ca636bac26f9fdb1 558 SUPERFAMILY SSF47781 400 550 2.23E-21 T 28-03-2018 IPR010994 RuvA domain 2-like AM393_RS09785 2e1a7a820dca6bf8ca636bac26f9fdb1 558 Gene3D G3DSA:1.10.150.20 500 542 4.8E-5 T 28-03-2018 AM393_RS09785 2e1a7a820dca6bf8ca636bac26f9fdb1 558 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 30 282 7.8E-21 T 28-03-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 AM393_RS09785 2e1a7a820dca6bf8ca636bac26f9fdb1 558 Gene3D G3DSA:1.10.287.610 21 89 7.3E-12 T 28-03-2018 AM393_RS09785 2e1a7a820dca6bf8ca636bac26f9fdb1 558 Gene3D G3DSA:3.30.470.30 128 264 4.0E-16 T 28-03-2018 AM393_RS09785 2e1a7a820dca6bf8ca636bac26f9fdb1 558 Gene3D G3DSA:2.40.50.140 308 380 1.2E-15 T 28-03-2018 AM393_RS09785 2e1a7a820dca6bf8ca636bac26f9fdb1 558 Hamap MF_01587 DNA ligase B [ligB]. 6 558 53.729 T 28-03-2018 IPR020923 DNA ligase B GO:0003911|GO:0006259 AM393_RS09785 2e1a7a820dca6bf8ca636bac26f9fdb1 558 SUPERFAMILY SSF56091 24 306 8.49E-63 T 28-03-2018 AM393_RS09785 2e1a7a820dca6bf8ca636bac26f9fdb1 558 Gene3D G3DSA:1.10.150.20 409 482 3.5E-9 T 28-03-2018 AM393_RS09785 2e1a7a820dca6bf8ca636bac26f9fdb1 558 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 313 386 2.5E-16 T 28-03-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 AM393_RS28995 a393e27e9aad0a34a1bd845306700d77 175 Gene3D G3DSA:3.30.870.10 37 174 1.8E-29 T 28-03-2018 AM393_RS28995 a393e27e9aad0a34a1bd845306700d77 175 Pfam PF13091 PLD-like domain 44 165 7.7E-29 T 28-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 AM393_RS28995 a393e27e9aad0a34a1bd845306700d77 175 SUPERFAMILY SSF56024 32 171 9.64E-37 T 28-03-2018 AM393_RS28995 a393e27e9aad0a34a1bd845306700d77 175 SMART SM00155 109 136 2.7E-4 T 28-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AM393_RS03020 4a6f754bc6cd1131b81f06f79dae557d 330 Gene3D G3DSA:3.20.20.100 15 329 5.1E-89 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM393_RS03020 4a6f754bc6cd1131b81f06f79dae557d 330 Pfam PF00248 Aldo/keto reductase family 28 328 2.7E-66 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM393_RS03020 4a6f754bc6cd1131b81f06f79dae557d 330 SUPERFAMILY SSF51430 13 327 1.31E-90 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM393_RS13190 6210cd42cb9859596b2d79f93338a67e 450 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 11 433 4.7E-149 T 28-03-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 AM393_RS13190 6210cd42cb9859596b2d79f93338a67e 450 TIGRFAM TIGR00359 cello_pts_IIC: PTS system, cellobiose-specific IIC component 11 433 4.7E-149 T 28-03-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 AM393_RS13190 6210cd42cb9859596b2d79f93338a67e 450 Pfam PF02378 Phosphotransferase system, EIIC 28 358 4.4E-60 T 28-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AM393_RS13190 6210cd42cb9859596b2d79f93338a67e 450 PIRSF PIRSF006351 2 443 5.0E-140 T 28-03-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 AM393_RS18210 57ea3e0fc152ea865fcf77e6a525703a 407 Gene3D G3DSA:3.40.50.620 8 237 5.1E-33 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM393_RS18210 57ea3e0fc152ea865fcf77e6a525703a 407 Pfam PF11922 Domain of unknown function (DUF3440) 237 339 1.9E-27 T 28-03-2018 IPR021845 Protein of unknown function DUF3440 AM393_RS18210 57ea3e0fc152ea865fcf77e6a525703a 407 Pfam PF11922 Domain of unknown function (DUF3440) 342 385 2.3E-8 T 28-03-2018 IPR021845 Protein of unknown function DUF3440 AM393_RS18210 57ea3e0fc152ea865fcf77e6a525703a 407 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 30 234 1.8E-17 T 28-03-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 Reactome: R-HSA-196843 AM393_RS18210 57ea3e0fc152ea865fcf77e6a525703a 407 SUPERFAMILY SSF52402 12 232 4.63E-44 T 28-03-2018 AM393_RS17760 6765c05cdb7c1fda622e4adaa1107607 904 SUPERFAMILY SSF81653 129 237 4.58E-31 T 28-03-2018 IPR008250 P-type ATPase, A domain Reactome: R-HSA-936837 AM393_RS17760 6765c05cdb7c1fda622e4adaa1107607 904 Gene3D G3DSA:3.40.1110.10 302 536 8.9E-39 T 28-03-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 AM393_RS17760 6765c05cdb7c1fda622e4adaa1107607 904 Pfam PF00689 Cation transporting ATPase, C-terminus 725 896 8.3E-40 T 28-03-2018 IPR006068 Cation-transporting P-type ATPase, C-terminal Reactome: R-HSA-936837 AM393_RS17760 6765c05cdb7c1fda622e4adaa1107607 904 Gene3D G3DSA:2.70.150.10 26 238 2.9E-48 T 28-03-2018 AM393_RS17760 6765c05cdb7c1fda622e4adaa1107607 904 Pfam PF00122 E1-E2 ATPase 125 318 1.6E-53 T 28-03-2018 AM393_RS17760 6765c05cdb7c1fda622e4adaa1107607 904 Gene3D G3DSA:1.20.1110.10 661 903 9.5E-60 T 28-03-2018 AM393_RS17760 6765c05cdb7c1fda622e4adaa1107607 904 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 664 676 5.5E-40 T 28-03-2018 AM393_RS17760 6765c05cdb7c1fda622e4adaa1107607 904 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 640 659 5.5E-40 T 28-03-2018 AM393_RS17760 6765c05cdb7c1fda622e4adaa1107607 904 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 175 189 5.5E-40 T 28-03-2018 AM393_RS17760 6765c05cdb7c1fda622e4adaa1107607 904 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 338 352 5.5E-40 T 28-03-2018 AM393_RS17760 6765c05cdb7c1fda622e4adaa1107607 904 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 539 550 5.5E-40 T 28-03-2018 AM393_RS17760 6765c05cdb7c1fda622e4adaa1107607 904 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 561 571 5.5E-40 T 28-03-2018 AM393_RS17760 6765c05cdb7c1fda622e4adaa1107607 904 Pfam PF00702 haloacid dehalogenase-like hydrolase 334 654 1.7E-19 T 28-03-2018 AM393_RS17760 6765c05cdb7c1fda622e4adaa1107607 904 SUPERFAMILY SSF56784 336 356 2.92E-57 T 28-03-2018 IPR023214 HAD-like domain AM393_RS17760 6765c05cdb7c1fda622e4adaa1107607 904 SUPERFAMILY SSF56784 494 743 2.92E-57 T 28-03-2018 IPR023214 HAD-like domain AM393_RS17760 6765c05cdb7c1fda622e4adaa1107607 904 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 340 346 - T 28-03-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 AM393_RS17760 6765c05cdb7c1fda622e4adaa1107607 904 Pfam PF00690 Cation transporter/ATPase, N-terminus 19 84 1.5E-18 T 28-03-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 AM393_RS17760 6765c05cdb7c1fda622e4adaa1107607 904 SMART SM00831 17 90 1.4E-29 T 28-03-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 AM393_RS17760 6765c05cdb7c1fda622e4adaa1107607 904 SUPERFAMILY SSF81660 345 543 1.01E-44 T 28-03-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 AM393_RS17760 6765c05cdb7c1fda622e4adaa1107607 904 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 96 358 2.0E-38 T 28-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AM393_RS17760 6765c05cdb7c1fda622e4adaa1107607 904 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 608 733 2.0E-35 T 28-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AM393_RS17760 6765c05cdb7c1fda622e4adaa1107607 904 SUPERFAMILY SSF81665 238 332 1.07E-115 T 28-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 AM393_RS17760 6765c05cdb7c1fda622e4adaa1107607 904 SUPERFAMILY SSF81665 690 902 1.07E-115 T 28-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 AM393_RS17760 6765c05cdb7c1fda622e4adaa1107607 904 SUPERFAMILY SSF81665 17 128 1.07E-115 T 28-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 AM393_RS17760 6765c05cdb7c1fda622e4adaa1107607 904 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 640 656 7.2E-21 T 28-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AM393_RS17760 6765c05cdb7c1fda622e4adaa1107607 904 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 497 515 7.2E-21 T 28-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AM393_RS17760 6765c05cdb7c1fda622e4adaa1107607 904 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 612 628 7.2E-21 T 28-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AM393_RS17760 6765c05cdb7c1fda622e4adaa1107607 904 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 809 830 7.2E-21 T 28-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AM393_RS17760 6765c05cdb7c1fda622e4adaa1107607 904 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 672 697 7.2E-21 T 28-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AM393_RS17760 6765c05cdb7c1fda622e4adaa1107607 904 Gene3D G3DSA:3.40.50.1000 537 660 8.4E-21 T 28-03-2018 IPR023214 HAD-like domain AM393_RS06785 bbce71eb3c311f9dde1cc39ff631c77a 275 ProDom PD587589 PHOSPHODIESTERASE ICC METALLOPHOSPHOESTERASE CYCLIC REGULATOR LACZ AMP HYDROLASE 3'5'-CYCLIC-NUCLEOTIDE EXPRESSION 206 261 9.0E-23 T 28-03-2018 IPR013622 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA, C-terminal KEGG: 00230+3.1.4.53 AM393_RS06785 bbce71eb3c311f9dde1cc39ff631c77a 275 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 15 261 41.885 T 28-03-2018 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 AM393_RS06785 bbce71eb3c311f9dde1cc39ff631c77a 275 SUPERFAMILY SSF56300 16 270 1.46E-60 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like AM393_RS06785 bbce71eb3c311f9dde1cc39ff631c77a 275 Gene3D G3DSA:3.60.21.10 8 272 6.9E-41 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like AM393_RS06785 bbce71eb3c311f9dde1cc39ff631c77a 275 Pfam PF00149 Calcineurin-like phosphoesterase 16 206 4.0E-19 T 28-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AM393_RS15360 7b019cab3205a1e3be7e3f0fd6b5d07f 809 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 2 809 26.236 T 28-03-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 AM393_RS15360 7b019cab3205a1e3be7e3f0fd6b5d07f 809 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 24 809 6.5E-288 T 28-03-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 AM393_RS15360 7b019cab3205a1e3be7e3f0fd6b5d07f 809 Gene3D G3DSA:3.10.20.310 18 91 3.0E-8 T 28-03-2018 AM393_RS15360 7b019cab3205a1e3be7e3f0fd6b5d07f 809 Gene3D G3DSA:3.10.20.310 350 386 0.015 T 28-03-2018 AM393_RS15360 7b019cab3205a1e3be7e3f0fd6b5d07f 809 Pfam PF07244 Surface antigen variable number repeat 347 421 2.5E-13 T 28-03-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 AM393_RS15360 7b019cab3205a1e3be7e3f0fd6b5d07f 809 Pfam PF07244 Surface antigen variable number repeat 176 263 2.1E-15 T 28-03-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 AM393_RS15360 7b019cab3205a1e3be7e3f0fd6b5d07f 809 Pfam PF07244 Surface antigen variable number repeat 92 172 6.9E-11 T 28-03-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 AM393_RS15360 7b019cab3205a1e3be7e3f0fd6b5d07f 809 Pfam PF07244 Surface antigen variable number repeat 266 344 3.3E-12 T 28-03-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 AM393_RS15360 7b019cab3205a1e3be7e3f0fd6b5d07f 809 Gene3D G3DSA:3.10.20.310 175 266 3.6E-21 T 28-03-2018 AM393_RS15360 7b019cab3205a1e3be7e3f0fd6b5d07f 809 Gene3D G3DSA:2.40.160.50 387 809 2.6E-86 T 28-03-2018 AM393_RS15360 7b019cab3205a1e3be7e3f0fd6b5d07f 809 Gene3D G3DSA:3.10.20.310 92 174 4.2E-12 T 28-03-2018 AM393_RS15360 7b019cab3205a1e3be7e3f0fd6b5d07f 809 Gene3D G3DSA:3.10.20.310 267 346 9.2E-13 T 28-03-2018 AM393_RS15360 7b019cab3205a1e3be7e3f0fd6b5d07f 809 PIRSF PIRSF006076 1 809 1.3E-257 T 28-03-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 AM393_RS15360 7b019cab3205a1e3be7e3f0fd6b5d07f 809 Pfam PF01103 Surface antigen 448 809 1.0E-100 T 28-03-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 AM393_RS26500 57dfa813bd08192eb696cad40ba0fd16 99 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 1 97 31.158 T 28-03-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 AM393_RS26500 57dfa813bd08192eb696cad40ba0fd16 99 PRINTS PR01727 Prokaryotic integration host factor signature 76 90 3.1E-17 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AM393_RS26500 57dfa813bd08192eb696cad40ba0fd16 99 PRINTS PR01727 Prokaryotic integration host factor signature 42 57 3.1E-17 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AM393_RS26500 57dfa813bd08192eb696cad40ba0fd16 99 PRINTS PR01727 Prokaryotic integration host factor signature 60 73 3.1E-17 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AM393_RS26500 57dfa813bd08192eb696cad40ba0fd16 99 Pfam PF00216 Bacterial DNA-binding protein 3 91 2.7E-30 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AM393_RS26500 57dfa813bd08192eb696cad40ba0fd16 99 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 2 97 4.6E-55 T 28-03-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 AM393_RS26500 57dfa813bd08192eb696cad40ba0fd16 99 Gene3D G3DSA:4.10.520.10 1 99 2.7E-33 T 28-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 AM393_RS26500 57dfa813bd08192eb696cad40ba0fd16 99 SUPERFAMILY SSF47729 3 93 1.16E-31 T 28-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 AM393_RS26500 57dfa813bd08192eb696cad40ba0fd16 99 SMART SM00411 3 92 1.2E-43 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AM393_RS26500 57dfa813bd08192eb696cad40ba0fd16 99 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 48 67 - T 28-03-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 AM393_RS20450 c91ff5db81cf18f0220f513fa30913a4 267 SUPERFAMILY SSF53474 10 254 9.7E-49 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AM393_RS20450 c91ff5db81cf18f0220f513fa30913a4 267 PRINTS PR00111 Alpha/beta hydrolase fold signature 99 112 4.0E-8 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM393_RS20450 c91ff5db81cf18f0220f513fa30913a4 267 PRINTS PR00111 Alpha/beta hydrolase fold signature 202 216 4.0E-8 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM393_RS20450 c91ff5db81cf18f0220f513fa30913a4 267 PRINTS PR00111 Alpha/beta hydrolase fold signature 85 98 4.0E-8 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM393_RS20450 c91ff5db81cf18f0220f513fa30913a4 267 PRINTS PR00111 Alpha/beta hydrolase fold signature 40 55 4.0E-8 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM393_RS20450 c91ff5db81cf18f0220f513fa30913a4 267 Pfam PF00561 alpha/beta hydrolase fold 15 240 1.4E-17 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM393_RS20450 c91ff5db81cf18f0220f513fa30913a4 267 Gene3D G3DSA:3.40.50.1820 1 266 2.2E-53 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AM393_RS20450 c91ff5db81cf18f0220f513fa30913a4 267 TIGRFAM TIGR03611 RutD: pyrimidine utilization protein D 2 258 6.1E-104 T 28-03-2018 IPR019913 Pyrimidine utilisation protein RutD GO:0006212|GO:0016811 AM393_RS20450 c91ff5db81cf18f0220f513fa30913a4 267 Hamap MF_00832 Putative aminoacrylate hydrolase RutD [rutD]. 2 259 50.842 T 28-03-2018 IPR019913 Pyrimidine utilisation protein RutD GO:0006212|GO:0016811 AM393_RS13290 e7954312b76688ef66c200454f50b9fb 951 TIGRFAM TIGR00422 valS: valine--tRNA ligase 1 932 0.0 T 28-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AM393_RS13290 e7954312b76688ef66c200454f50b9fb 951 SUPERFAMILY SSF52374 364 571 2.82E-136 T 28-03-2018 AM393_RS13290 e7954312b76688ef66c200454f50b9fb 951 SUPERFAMILY SSF52374 1 192 2.82E-136 T 28-03-2018 AM393_RS13290 e7954312b76688ef66c200454f50b9fb 951 SUPERFAMILY SSF52374 609 641 2.82E-136 T 28-03-2018 AM393_RS13290 e7954312b76688ef66c200454f50b9fb 951 SUPERFAMILY SSF46589 884 947 6.28E-16 T 28-03-2018 IPR010978 tRNA-binding arm GO:0000166 AM393_RS13290 e7954312b76688ef66c200454f50b9fb 951 Gene3D G3DSA:3.40.50.620 2 630 4.3E-135 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM393_RS13290 e7954312b76688ef66c200454f50b9fb 951 SUPERFAMILY SSF50677 191 365 6.54E-57 T 28-03-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 AM393_RS13290 e7954312b76688ef66c200454f50b9fb 951 Gene3D G3DSA:1.10.287.380 877 946 2.5E-23 T 28-03-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 AM393_RS13290 e7954312b76688ef66c200454f50b9fb 951 SUPERFAMILY SSF47323 642 899 1.79E-69 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM393_RS13290 e7954312b76688ef66c200454f50b9fb 951 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 28-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM393_RS13290 e7954312b76688ef66c200454f50b9fb 951 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 14 631 3.7E-232 T 28-03-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM393_RS13290 e7954312b76688ef66c200454f50b9fb 951 PRINTS PR00986 Valyl-tRNA synthetase signature 469 490 1.4E-35 T 28-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AM393_RS13290 e7954312b76688ef66c200454f50b9fb 951 PRINTS PR00986 Valyl-tRNA synthetase signature 35 46 1.4E-35 T 28-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AM393_RS13290 e7954312b76688ef66c200454f50b9fb 951 PRINTS PR00986 Valyl-tRNA synthetase signature 236 253 1.4E-35 T 28-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AM393_RS13290 e7954312b76688ef66c200454f50b9fb 951 PRINTS PR00986 Valyl-tRNA synthetase signature 500 518 1.4E-35 T 28-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AM393_RS13290 e7954312b76688ef66c200454f50b9fb 951 PRINTS PR00986 Valyl-tRNA synthetase signature 369 382 1.4E-35 T 28-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AM393_RS13290 e7954312b76688ef66c200454f50b9fb 951 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 886 944 2.6E-16 T 28-03-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 AM393_RS13290 e7954312b76688ef66c200454f50b9fb 951 Gene3D G3DSA:1.10.730.10 631 816 3.8E-55 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM393_RS13290 e7954312b76688ef66c200454f50b9fb 951 Pfam PF08264 Anticodon-binding domain of tRNA 674 824 7.1E-42 T 28-03-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 AM393_RS13290 e7954312b76688ef66c200454f50b9fb 951 Hamap MF_02004 Valine--tRNA ligase [valS]. 1 949 16.196 T 28-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AM393_RS10265 d9310d98fb9f0c6182b4cabb0aa750ca 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 138 155 6.1E-59 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AM393_RS10265 d9310d98fb9f0c6182b4cabb0aa750ca 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 191 203 6.1E-59 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AM393_RS10265 d9310d98fb9f0c6182b4cabb0aa750ca 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 5 20 6.1E-59 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AM393_RS10265 d9310d98fb9f0c6182b4cabb0aa750ca 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 74 90 6.1E-59 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AM393_RS10265 d9310d98fb9f0c6182b4cabb0aa750ca 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 95 108 6.1E-59 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AM393_RS10265 d9310d98fb9f0c6182b4cabb0aa750ca 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 164 175 6.1E-59 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AM393_RS10265 d9310d98fb9f0c6182b4cabb0aa750ca 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 109 129 6.1E-59 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AM393_RS10265 d9310d98fb9f0c6182b4cabb0aa750ca 440 SUPERFAMILY SSF51735 3 164 3.75E-53 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS10265 d9310d98fb9f0c6182b4cabb0aa750ca 440 SUPERFAMILY SSF56327 168 439 6.48E-95 T 28-03-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 AM393_RS10265 d9310d98fb9f0c6182b4cabb0aa750ca 440 Gene3D G3DSA:3.90.1820.10 1 272 1.2E-61 T 28-03-2018 AM393_RS10265 d9310d98fb9f0c6182b4cabb0aa750ca 440 Gene3D G3DSA:3.90.1820.10 273 440 1.3E-44 T 28-03-2018 AM393_RS10265 d9310d98fb9f0c6182b4cabb0aa750ca 440 ProSitePatterns PS01324 Glycosyl hydrolases family 4 signature. 138 169 - T 28-03-2018 IPR019802 Glycoside hydrolase, family 4, conserved site GO:0004553|GO:0005975 AM393_RS10265 d9310d98fb9f0c6182b4cabb0aa750ca 440 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 195 415 1.7E-51 T 28-03-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 AM393_RS10265 d9310d98fb9f0c6182b4cabb0aa750ca 440 Pfam PF02056 Family 4 glycosyl hydrolase 6 184 1.9E-65 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AM393_RS06075 a228385edf77804c1bc8c80cb35c105d 398 Gene3D G3DSA:3.50.50.60 101 237 1.4E-25 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS06075 a228385edf77804c1bc8c80cb35c105d 398 SUPERFAMILY SSF55424 308 397 5.36E-18 T 28-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 AM393_RS06075 a228385edf77804c1bc8c80cb35c105d 398 SUPERFAMILY SSF51905 2 303 1.59E-37 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS06075 a228385edf77804c1bc8c80cb35c105d 398 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 283 1.1E-52 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS06075 a228385edf77804c1bc8c80cb35c105d 398 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 229 245 3.5E-18 T 28-03-2018 AM393_RS06075 a228385edf77804c1bc8c80cb35c105d 398 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 100 118 3.5E-18 T 28-03-2018 AM393_RS06075 a228385edf77804c1bc8c80cb35c105d 398 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 254 276 3.5E-18 T 28-03-2018 AM393_RS06075 a228385edf77804c1bc8c80cb35c105d 398 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 3.5E-18 T 28-03-2018 AM393_RS06075 a228385edf77804c1bc8c80cb35c105d 398 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 145 163 3.5E-18 T 28-03-2018 AM393_RS06075 a228385edf77804c1bc8c80cb35c105d 398 Pfam PF14759 Reductase C-terminal 315 397 6.6E-19 T 28-03-2018 IPR028202 Reductase, C-terminal AM393_RS06075 a228385edf77804c1bc8c80cb35c105d 398 Gene3D G3DSA:3.50.50.60 238 319 1.1E-7 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS06075 a228385edf77804c1bc8c80cb35c105d 398 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 2.1E-14 T 28-03-2018 AM393_RS06075 a228385edf77804c1bc8c80cb35c105d 398 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 269 276 2.1E-14 T 28-03-2018 AM393_RS06075 a228385edf77804c1bc8c80cb35c105d 398 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 230 244 2.1E-14 T 28-03-2018 AM393_RS06075 a228385edf77804c1bc8c80cb35c105d 398 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 145 170 2.1E-14 T 28-03-2018 AM393_RS06075 a228385edf77804c1bc8c80cb35c105d 398 Gene3D G3DSA:3.50.50.60 1 100 2.3E-10 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS06075 a228385edf77804c1bc8c80cb35c105d 398 Gene3D G3DSA:3.30.390.30 320 398 5.2E-18 T 28-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 AM393_RS16650 ff3f824ff7e0b090de71850f75a56916 423 Hamap MF_01301 Maltoporin [lamB]. 2 423 43.856 T 28-03-2018 IPR023738 Maltoporin GO:0009279|GO:0015481|GO:0015768|GO:0042956|GO:0042958 AM393_RS16650 ff3f824ff7e0b090de71850f75a56916 423 Pfam PF02264 LamB porin 33 423 1.2E-110 T 28-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 AM393_RS16650 ff3f824ff7e0b090de71850f75a56916 423 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 38 418 0.0 T 28-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 AM393_RS16650 ff3f824ff7e0b090de71850f75a56916 423 Gene3D G3DSA:2.40.170.10 31 423 6.2E-118 T 28-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 AM393_RS16650 ff3f824ff7e0b090de71850f75a56916 423 SUPERFAMILY SSF56935 31 423 2.5E-109 T 28-03-2018 AM393_RS14070 6fef8a3993aed045380e9703f2b3c70e 763 Pfam PF00884 Sulfatase 163 446 4.1E-22 T 28-03-2018 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 AM393_RS14070 6fef8a3993aed045380e9703f2b3c70e 763 Gene3D G3DSA:3.40.720.10 151 449 4.0E-29 T 28-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AM393_RS14070 6fef8a3993aed045380e9703f2b3c70e 763 SUPERFAMILY SSF53649 162 469 4.8E-30 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AM393_RS12575 0c06510670262ff987a2c4ab4ebdeb30 433 PIRSF PIRSF004539 1 433 3.6E-180 T 28-03-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 AM393_RS12575 0c06510670262ff987a2c4ab4ebdeb30 433 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 5 365 6.3E-154 T 28-03-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 AM393_RS12575 0c06510670262ff987a2c4ab4ebdeb30 433 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 5 433 4.6E-197 T 28-03-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 AM393_RS16050 5afc7861a7d7b0a0633d011a7a63e1b5 324 SUPERFAMILY SSF51569 4 319 3.08E-129 T 28-03-2018 AM393_RS16050 5afc7861a7d7b0a0633d011a7a63e1b5 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 265 280 2.1E-54 T 28-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AM393_RS16050 5afc7861a7d7b0a0633d011a7a63e1b5 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 151 170 2.1E-54 T 28-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AM393_RS16050 5afc7861a7d7b0a0633d011a7a63e1b5 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 295 314 2.1E-54 T 28-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AM393_RS16050 5afc7861a7d7b0a0633d011a7a63e1b5 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 240 256 2.1E-54 T 28-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AM393_RS16050 5afc7861a7d7b0a0633d011a7a63e1b5 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 189 208 2.1E-54 T 28-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AM393_RS16050 5afc7861a7d7b0a0633d011a7a63e1b5 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 121 135 2.1E-54 T 28-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AM393_RS16050 5afc7861a7d7b0a0633d011a7a63e1b5 324 Pfam PF00490 Delta-aminolevulinic acid dehydratase 6 319 5.8E-134 T 28-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AM393_RS16050 5afc7861a7d7b0a0633d011a7a63e1b5 324 SMART SM01004 3 321 4.7E-208 T 28-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AM393_RS16050 5afc7861a7d7b0a0633d011a7a63e1b5 324 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 240 252 - T 28-03-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AM393_RS16050 5afc7861a7d7b0a0633d011a7a63e1b5 324 PIRSF PIRSF001415 1 323 9.5E-146 T 28-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AM393_RS16050 5afc7861a7d7b0a0633d011a7a63e1b5 324 Gene3D G3DSA:3.20.20.70 1 321 1.1E-136 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM393_RS02340 9bb94742aecf240adda419247fcf26db 295 Pfam PF03466 LysR substrate binding domain 97 247 2.8E-7 T 28-03-2018 IPR005119 LysR, substrate-binding AM393_RS02340 9bb94742aecf240adda419247fcf26db 295 Gene3D G3DSA:1.10.10.10 1 86 1.3E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS02340 9bb94742aecf240adda419247fcf26db 295 SUPERFAMILY SSF53850 92 280 9.95E-12 T 28-03-2018 AM393_RS02340 9bb94742aecf240adda419247fcf26db 295 SUPERFAMILY SSF46785 6 87 5.82E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS02340 9bb94742aecf240adda419247fcf26db 295 Gene3D G3DSA:3.40.190.10 87 209 1.7E-5 T 28-03-2018 AM393_RS02340 9bb94742aecf240adda419247fcf26db 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 6.1E-13 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS00305 83e5ff4da231c19765ac2bda5abe8f68 176 Pfam PF02600 Disulfide bond formation protein DsbB 12 159 1.8E-45 T 28-03-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 AM393_RS00305 83e5ff4da231c19765ac2bda5abe8f68 176 Gene3D G3DSA:1.20.1550.10 1 176 4.5E-57 T 28-03-2018 IPR023380 Disulphide bond formation protein DsbB-like domain AM393_RS00305 83e5ff4da231c19765ac2bda5abe8f68 176 Hamap MF_00286 Disulfide bond formation protein B [dsbB]. 7 167 22.263 T 28-03-2018 IPR022920 Disulphide bond formation protein DsbB AM393_RS00305 83e5ff4da231c19765ac2bda5abe8f68 176 SUPERFAMILY SSF158442 15 160 8.5E-46 T 28-03-2018 IPR023380 Disulphide bond formation protein DsbB-like domain AM393_RS08370 aba59d240f69efb5e29c3f3ffc6844e4 124 SUPERFAMILY SSF50249 3 123 9.42E-52 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM393_RS08370 aba59d240f69efb5e29c3f3ffc6844e4 124 PRINTS PR01034 Ribosomal protein S12 signature 110 122 5.2E-60 T 28-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM393_RS08370 aba59d240f69efb5e29c3f3ffc6844e4 124 PRINTS PR01034 Ribosomal protein S12 signature 94 110 5.2E-60 T 28-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM393_RS08370 aba59d240f69efb5e29c3f3ffc6844e4 124 PRINTS PR01034 Ribosomal protein S12 signature 58 77 5.2E-60 T 28-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM393_RS08370 aba59d240f69efb5e29c3f3ffc6844e4 124 PRINTS PR01034 Ribosomal protein S12 signature 27 42 5.2E-60 T 28-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM393_RS08370 aba59d240f69efb5e29c3f3ffc6844e4 124 PRINTS PR01034 Ribosomal protein S12 signature 77 94 5.2E-60 T 28-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM393_RS08370 aba59d240f69efb5e29c3f3ffc6844e4 124 PRINTS PR01034 Ribosomal protein S12 signature 42 57 5.2E-60 T 28-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM393_RS08370 aba59d240f69efb5e29c3f3ffc6844e4 124 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 124 1.1E-70 T 28-03-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS08370 aba59d240f69efb5e29c3f3ffc6844e4 124 PIRSF PIRSF002133 1 124 5.9E-54 T 28-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM393_RS08370 aba59d240f69efb5e29c3f3ffc6844e4 124 Gene3D G3DSA:2.40.50.140 1 124 4.9E-64 T 28-03-2018 AM393_RS08370 aba59d240f69efb5e29c3f3ffc6844e4 124 Pfam PF00164 Ribosomal protein S12/S23 12 123 5.1E-43 T 28-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM393_RS08370 aba59d240f69efb5e29c3f3ffc6844e4 124 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 38.747 T 28-03-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS08370 aba59d240f69efb5e29c3f3ffc6844e4 124 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 28-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM393_RS11340 88d14d24602640542d30bd8350a81419 448 Hamap MF_01003 Probable ECA polymerase [wzyE]. 1 448 40.422 T 28-03-2018 IPR010691 Probable ECA polymerase WzyE GO:0009246|GO:0016021 AM393_RS11340 88d14d24602640542d30bd8350a81419 448 Pfam PF06899 WzyE protein, O-antigen assembly polymerase 1 443 1.1E-251 T 28-03-2018 IPR010691 Probable ECA polymerase WzyE GO:0009246|GO:0016021 AM393_RS06835 3868257e91864cc7ddba5af56494b144 65 ProDom PD054490 GLYCOGEN GLGS SYNTHESIS BIOSYNTHESIS DEPENDENT BIOSYNTHESIS RPOS 3D-STRUCTURE 3 58 7.0E-21 T 28-03-2018 IPR015065 Surface composition regulator AM393_RS06835 3868257e91864cc7ddba5af56494b144 65 SUPERFAMILY SSF109747 3 59 4.97E-30 T 28-03-2018 IPR015065 Surface composition regulator AM393_RS06835 3868257e91864cc7ddba5af56494b144 65 Hamap MF_00525 Surface composition regulator [glgS]. 1 60 20.212 T 28-03-2018 IPR015065 Surface composition regulator AM393_RS06835 3868257e91864cc7ddba5af56494b144 65 Gene3D G3DSA:1.20.970.20 10 59 1.8E-27 T 28-03-2018 AM393_RS06835 3868257e91864cc7ddba5af56494b144 65 Pfam PF08971 Glycogen synthesis protein 3 59 4.0E-32 T 28-03-2018 IPR015065 Surface composition regulator AM393_RS27940 b29039489c839d19a4f1fbd0e3d5b4b8 326 Pfam PF05598 Transposase domain (DUF772) 51 124 1.6E-22 T 28-03-2018 IPR008490 Transposase InsH, N-terminal AM393_RS27940 b29039489c839d19a4f1fbd0e3d5b4b8 326 Pfam PF01609 Transposase DDE domain 138 312 5.3E-29 T 28-03-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AM393_RS07540 07139d7a1c68bfe875684d2d7a7dcf9d 445 SUPERFAMILY SSF53738 2 181 1.14E-47 T 28-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM393_RS07540 07139d7a1c68bfe875684d2d7a7dcf9d 445 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 258 366 1.1E-30 T 28-03-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM393_RS07540 07139d7a1c68bfe875684d2d7a7dcf9d 445 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 157 254 7.7E-20 T 28-03-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM393_RS07540 07139d7a1c68bfe875684d2d7a7dcf9d 445 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 4 136 1.5E-44 T 28-03-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM393_RS07540 07139d7a1c68bfe875684d2d7a7dcf9d 445 SUPERFAMILY SSF55957 357 444 1.96E-21 T 28-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM393_RS07540 07139d7a1c68bfe875684d2d7a7dcf9d 445 Gene3D G3DSA:3.30.310.50 374 445 2.9E-17 T 28-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM393_RS07540 07139d7a1c68bfe875684d2d7a7dcf9d 445 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 174 193 1.1E-13 T 28-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM393_RS07540 07139d7a1c68bfe875684d2d7a7dcf9d 445 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 95 109 1.1E-13 T 28-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM393_RS07540 07139d7a1c68bfe875684d2d7a7dcf9d 445 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 234 249 1.1E-13 T 28-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM393_RS07540 07139d7a1c68bfe875684d2d7a7dcf9d 445 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 7 443 2.2E-196 T 28-03-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM393_RS07540 07139d7a1c68bfe875684d2d7a7dcf9d 445 SUPERFAMILY SSF53738 258 365 1.26E-29 T 28-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM393_RS07540 07139d7a1c68bfe875684d2d7a7dcf9d 445 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 96 105 - T 28-03-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM393_RS07540 07139d7a1c68bfe875684d2d7a7dcf9d 445 Gene3D G3DSA:3.40.120.10 155 267 4.3E-33 T 28-03-2018 AM393_RS07540 07139d7a1c68bfe875684d2d7a7dcf9d 445 Gene3D G3DSA:3.40.120.10 3 154 3.3E-48 T 28-03-2018 AM393_RS07540 07139d7a1c68bfe875684d2d7a7dcf9d 445 SUPERFAMILY SSF53738 156 256 1.18E-29 T 28-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM393_RS07540 07139d7a1c68bfe875684d2d7a7dcf9d 445 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 3 445 47.386 T 28-03-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM393_RS07540 07139d7a1c68bfe875684d2d7a7dcf9d 445 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 373 442 2.6E-15 T 28-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM393_RS07540 07139d7a1c68bfe875684d2d7a7dcf9d 445 Gene3D G3DSA:3.40.120.10 268 373 2.2E-27 T 28-03-2018 AM393_RS20250 01093638d9b751b15837356484bd6807 152 Pfam PF02142 MGS-like domain 26 118 1.5E-18 T 28-03-2018 IPR011607 Methylglyoxal synthase-like domain AM393_RS20250 01093638d9b751b15837356484bd6807 152 TIGRFAM TIGR00160 MGSA: methylglyoxal synthase 11 151 3.8E-71 T 28-03-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 AM393_RS20250 01093638d9b751b15837356484bd6807 152 Hamap MF_00549 Methylglyoxal synthase [mgsA]. 12 131 40.039 T 28-03-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 AM393_RS20250 01093638d9b751b15837356484bd6807 152 PIRSF PIRSF006614 8 151 1.5E-64 T 28-03-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 AM393_RS20250 01093638d9b751b15837356484bd6807 152 SMART SM00851 25 118 3.3E-24 T 28-03-2018 IPR011607 Methylglyoxal synthase-like domain AM393_RS20250 01093638d9b751b15837356484bd6807 152 SUPERFAMILY SSF52335 2 147 1.31E-57 T 28-03-2018 IPR011607 Methylglyoxal synthase-like domain AM393_RS20250 01093638d9b751b15837356484bd6807 152 ProSitePatterns PS01335 Methylglyoxal synthase active site. 65 73 - T 28-03-2018 IPR018148 Methylglyoxal synthase, active site GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 AM393_RS20250 01093638d9b751b15837356484bd6807 152 Gene3D G3DSA:3.40.50.1380 1 152 4.4E-43 T 28-03-2018 IPR011607 Methylglyoxal synthase-like domain AM393_RS13930 9f8d40dc7b8f3cb70cfc4ad38c22c0a8 210 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 5 204 2.1E-41 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AM393_RS13930 9f8d40dc7b8f3cb70cfc4ad38c22c0a8 210 SUPERFAMILY SSF56529 2 204 2.49E-53 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AM393_RS13930 9f8d40dc7b8f3cb70cfc4ad38c22c0a8 210 TIGRFAM TIGR02305 HpaG-N-term: 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, N-terminal subunit 3 203 2.1E-86 T 28-03-2018 IPR012686 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, N-terminal subunit GO:0008704|GO:0018800 KEGG: 00350+5.3.3.10+4.1.1.68 AM393_RS13930 9f8d40dc7b8f3cb70cfc4ad38c22c0a8 210 Gene3D G3DSA:3.90.850.10 1 210 4.3E-46 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AM393_RS10985 1182617361c458fcb1d09fb086068754 322 TIGRFAM TIGR02223 ftsN: cell division protein FtsN 2 318 3.3E-93 T 28-03-2018 IPR011930 Cell division protein FtsN GO:0005515 AM393_RS10985 1182617361c458fcb1d09fb086068754 322 Pfam PF05036 Sporulation related domain 249 315 9.2E-16 T 28-03-2018 IPR007730 Sporulation-related domain GO:0042834 AM393_RS10985 1182617361c458fcb1d09fb086068754 322 SUPERFAMILY SSF110997 247 317 1.83E-18 T 28-03-2018 IPR007730 Sporulation-related domain GO:0042834 AM393_RS10985 1182617361c458fcb1d09fb086068754 322 Gene3D G3DSA:3.30.70.1070 244 319 2.4E-14 T 28-03-2018 IPR007730 Sporulation-related domain GO:0042834 AM393_RS10985 1182617361c458fcb1d09fb086068754 322 Hamap MF_02039 Cell division protein FtsN [ftsN]. 39 322 33.249 T 28-03-2018 IPR011930 Cell division protein FtsN GO:0005515 AM393_RS01575 50ebc355068eca4a4445d6b7b4f91b48 355 SUPERFAMILY SSF52733 5 346 6.67E-108 T 28-03-2018 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 AM393_RS01575 50ebc355068eca4a4445d6b7b4f91b48 355 Hamap MF_00230 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [cobT]. 13 348 32.732 T 28-03-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 AM393_RS01575 50ebc355068eca4a4445d6b7b4f91b48 355 Gene3D G3DSA:3.40.50.10210 73 329 3.4E-93 T 28-03-2018 AM393_RS01575 50ebc355068eca4a4445d6b7b4f91b48 355 Pfam PF02277 Phosphoribosyltransferase 11 345 2.7E-116 T 28-03-2018 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 AM393_RS01575 50ebc355068eca4a4445d6b7b4f91b48 355 Gene3D G3DSA:1.10.1610.10 5 72 5.3E-28 T 28-03-2018 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 AM393_RS01575 50ebc355068eca4a4445d6b7b4f91b48 355 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 15 346 6.5E-114 T 28-03-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 AM393_RS01700 e173f0ebb56a474c3b59c92eec833937 384 SUPERFAMILY SSF54373 248 316 2.16E-26 T 28-03-2018 AM393_RS01700 e173f0ebb56a474c3b59c92eec833937 384 Pfam PF03275 UDP-galactopyranose mutase 150 349 1.5E-76 T 28-03-2018 IPR015899 UDP-galactopyranose mutase, C-terminal GO:0008767 KEGG: 00052+5.4.99.9|KEGG: 00520+5.4.99.9|MetaCyc: PWY-6397|MetaCyc: PWY-7328|MetaCyc: PWY-7622 AM393_RS01700 e173f0ebb56a474c3b59c92eec833937 384 Pfam PF13450 NAD(P)-binding Rossmann-like domain 8 75 6.3E-17 T 28-03-2018 AM393_RS01700 e173f0ebb56a474c3b59c92eec833937 384 Gene3D G3DSA:3.40.50.720 1 295 3.3E-42 T 28-03-2018 AM393_RS01700 e173f0ebb56a474c3b59c92eec833937 384 Gene3D G3DSA:3.40.50.720 296 373 2.8E-10 T 28-03-2018 AM393_RS01700 e173f0ebb56a474c3b59c92eec833937 384 TIGRFAM TIGR00031 UDP-GALP_mutase: UDP-galactopyranose mutase 5 365 1.3E-97 T 28-03-2018 IPR004379 UDP-galactopyranose mutase GO:0008767 KEGG: 00052+5.4.99.9|KEGG: 00520+5.4.99.9|MetaCyc: PWY-6397|MetaCyc: PWY-7328|MetaCyc: PWY-7622 AM393_RS01700 e173f0ebb56a474c3b59c92eec833937 384 SUPERFAMILY SSF51971 334 373 9.06E-54 T 28-03-2018 AM393_RS01700 e173f0ebb56a474c3b59c92eec833937 384 SUPERFAMILY SSF51971 2 265 9.06E-54 T 28-03-2018 AM393_RS00295 d99400392a5080add937dd82dbbf2b5d 239 TIGRFAM TIGR02812 fadR_gamma: fatty acid metabolism transcriptional regulator FadR 2 235 8.8E-123 T 28-03-2018 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 AM393_RS00295 d99400392a5080add937dd82dbbf2b5d 239 Gene3D G3DSA:1.20.120.530 80 239 6.9E-24 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AM393_RS00295 d99400392a5080add937dd82dbbf2b5d 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 2.7E-9 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM393_RS00295 d99400392a5080add937dd82dbbf2b5d 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 2.7E-9 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM393_RS00295 d99400392a5080add937dd82dbbf2b5d 239 Hamap MF_00696 Fatty acid metabolism regulator protein [fadR]. 1 239 163.125 T 28-03-2018 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 AM393_RS00295 d99400392a5080add937dd82dbbf2b5d 239 SMART SM00345 12 71 1.0E-22 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM393_RS00295 d99400392a5080add937dd82dbbf2b5d 239 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 71 5.3E-20 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM393_RS00295 d99400392a5080add937dd82dbbf2b5d 239 SUPERFAMILY SSF46785 11 87 3.29E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS00295 d99400392a5080add937dd82dbbf2b5d 239 Pfam PF07840 FadR C-terminal domain 72 234 2.7E-72 T 28-03-2018 IPR028374 FadR, C-terminal domain GO:0000062|GO:0019217 AM393_RS00295 d99400392a5080add937dd82dbbf2b5d 239 SUPERFAMILY SSF48008 79 230 2.88E-64 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AM393_RS00295 d99400392a5080add937dd82dbbf2b5d 239 Gene3D G3DSA:1.10.10.10 1 79 7.9E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS08365 d46d92b46e33cc2464677bde02d23f00 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 1.4E-64 T 28-03-2018 IPR023798 Ribosomal protein S7 domain AM393_RS08365 d46d92b46e33cc2464677bde02d23f00 156 PIRSF PIRSF002122 3 156 4.1E-63 T 28-03-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 AM393_RS08365 d46d92b46e33cc2464677bde02d23f00 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 3.9E-71 T 28-03-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 AM393_RS08365 d46d92b46e33cc2464677bde02d23f00 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 35.304 T 28-03-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 AM393_RS08365 d46d92b46e33cc2464677bde02d23f00 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 28-03-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM393_RS08365 d46d92b46e33cc2464677bde02d23f00 156 SUPERFAMILY SSF47973 6 149 7.72E-60 T 28-03-2018 IPR023798 Ribosomal protein S7 domain AM393_RS08365 d46d92b46e33cc2464677bde02d23f00 156 Gene3D G3DSA:1.10.455.10 6 156 5.1E-61 T 28-03-2018 IPR023798 Ribosomal protein S7 domain AM393_RS17460 ccbac6e1fe405ae505f74551c1f0ca0d 255 Gene3D G3DSA:2.60.120.10 79 184 2.6E-4 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AM393_RS17460 ccbac6e1fe405ae505f74551c1f0ca0d 255 Pfam PF15977 Winged helix-turn-helix DNA binding 203 253 1.6E-14 T 28-03-2018 AM393_RS17460 ccbac6e1fe405ae505f74551c1f0ca0d 255 Gene3D G3DSA:1.10.10.10 185 248 5.3E-4 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS25735 f533d2a7542b85814daf914716e42145 142 SUPERFAMILY SSF51316 2 118 1.0E-29 T 28-03-2018 IPR011057 Mss4-like AM393_RS25735 f533d2a7542b85814daf914716e42145 142 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 22 103 2.0E-15 T 28-03-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 AM393_RS25735 f533d2a7542b85814daf914716e42145 142 Gene3D G3DSA:3.90.1590.10 1 129 6.0E-25 T 28-03-2018 AM393_RS03630 c7b05d7bb29eea5af5b660e07165a641 244 PIRSF PIRSF004808 1 244 2.8E-79 T 28-03-2018 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 AM393_RS03630 c7b05d7bb29eea5af5b660e07165a641 244 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 1 242 1.5E-94 T 28-03-2018 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 AM393_RS03630 c7b05d7bb29eea5af5b660e07165a641 244 SUPERFAMILY SSF75217 4 175 1.31E-39 T 28-03-2018 IPR029028 Alpha/beta knot methyltransferases AM393_RS03630 c7b05d7bb29eea5af5b660e07165a641 244 Pfam PF00588 SpoU rRNA Methylase family 5 154 2.8E-33 T 28-03-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AM393_RS03630 c7b05d7bb29eea5af5b660e07165a641 244 Gene3D G3DSA:3.40.1280.10 1 165 8.6E-44 T 28-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AM393_RS23280 44e19f7bf0c7bfa45236659681944027 143 SUPERFAMILY SSF52402 1 143 4.27E-29 T 28-03-2018 AM393_RS23280 44e19f7bf0c7bfa45236659681944027 143 PIRSF PIRSF006276 1 143 9.8E-19 T 28-03-2018 IPR006015 Universal stress protein A AM393_RS23280 44e19f7bf0c7bfa45236659681944027 143 Pfam PF00582 Universal stress protein family 1 143 4.8E-26 T 28-03-2018 IPR006016 UspA GO:0006950 AM393_RS23280 44e19f7bf0c7bfa45236659681944027 143 PRINTS PR01438 Universal stress protein signature 2 20 4.0E-14 T 28-03-2018 IPR006015 Universal stress protein A AM393_RS23280 44e19f7bf0c7bfa45236659681944027 143 PRINTS PR01438 Universal stress protein signature 104 116 4.0E-14 T 28-03-2018 IPR006015 Universal stress protein A AM393_RS23280 44e19f7bf0c7bfa45236659681944027 143 PRINTS PR01438 Universal stress protein signature 121 143 4.0E-14 T 28-03-2018 IPR006015 Universal stress protein A AM393_RS23280 44e19f7bf0c7bfa45236659681944027 143 Gene3D G3DSA:3.40.50.620 2 143 5.0E-28 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM393_RS14660 8e851a2f3dbbde6f3b2acf47e085c847 785 ProSitePatterns PS00116 DNA polymerase family B signature. 545 553 - T 28-03-2018 IPR017964 DNA-directed DNA polymerase, family B, conserved site GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM393_RS14660 8e851a2f3dbbde6f3b2acf47e085c847 785 Gene3D G3DSA:3.90.1600.10 398 602 6.6E-51 T 28-03-2018 IPR023211 DNA polymerase, palm domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM393_RS14660 8e851a2f3dbbde6f3b2acf47e085c847 785 SMART SM00486 150 557 5.0E-72 T 28-03-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM393_RS14660 8e851a2f3dbbde6f3b2acf47e085c847 785 SUPERFAMILY SSF53098 6 391 6.75E-94 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM393_RS14660 8e851a2f3dbbde6f3b2acf47e085c847 785 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 543 551 7.1E-10 T 28-03-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM393_RS14660 8e851a2f3dbbde6f3b2acf47e085c847 785 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 491 503 7.1E-10 T 28-03-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM393_RS14660 8e851a2f3dbbde6f3b2acf47e085c847 785 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 417 430 7.1E-10 T 28-03-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM393_RS14660 8e851a2f3dbbde6f3b2acf47e085c847 785 Pfam PF03104 DNA polymerase family B, exonuclease domain 206 298 2.6E-6 T 28-03-2018 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM393_RS14660 8e851a2f3dbbde6f3b2acf47e085c847 785 Gene3D G3DSA:3.30.420.10 153 349 4.2E-39 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM393_RS14660 8e851a2f3dbbde6f3b2acf47e085c847 785 Pfam PF00136 DNA polymerase family B 400 738 2.6E-40 T 28-03-2018 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain GO:0000166|GO:0003677 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM393_RS14660 8e851a2f3dbbde6f3b2acf47e085c847 785 SUPERFAMILY SSF56672 387 779 4.95E-112 T 28-03-2018 AM393_RS01270 1fbcaea0f967a7316ec9f952ce1e1878 525 Pfam PF13193 AMP-binding enzyme C-terminal domain 431 506 8.6E-14 T 28-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain AM393_RS01270 1fbcaea0f967a7316ec9f952ce1e1878 525 Gene3D G3DSA:3.40.50.980 15 178 4.9E-28 T 28-03-2018 AM393_RS01270 1fbcaea0f967a7316ec9f952ce1e1878 525 ProSitePatterns PS00455 Putative AMP-binding domain signature. 174 185 - T 28-03-2018 IPR020845 AMP-binding, conserved site AM393_RS01270 1fbcaea0f967a7316ec9f952ce1e1878 525 Gene3D G3DSA:3.30.300.30 417 525 3.3E-23 T 28-03-2018 AM393_RS01270 1fbcaea0f967a7316ec9f952ce1e1878 525 Gene3D G3DSA:2.30.38.10 333 415 1.3E-20 T 28-03-2018 AM393_RS01270 1fbcaea0f967a7316ec9f952ce1e1878 525 Pfam PF00501 AMP-binding enzyme 21 422 1.0E-78 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AM393_RS01270 1fbcaea0f967a7316ec9f952ce1e1878 525 SUPERFAMILY SSF56801 9 518 4.32E-126 T 28-03-2018 AM393_RS01270 1fbcaea0f967a7316ec9f952ce1e1878 525 Gene3D G3DSA:3.40.50.980 179 332 1.5E-34 T 28-03-2018 AM393_RS07355 6f9979dd42eef49fa2b3d2d7249095f7 347 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 58 72 - T 28-03-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 AM393_RS07355 6f9979dd42eef49fa2b3d2d7249095f7 347 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 130 1.5E-27 T 28-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AM393_RS07355 6f9979dd42eef49fa2b3d2d7249095f7 347 Gene3D G3DSA:3.40.50.720 154 320 7.7E-27 T 28-03-2018 AM393_RS07355 6f9979dd42eef49fa2b3d2d7249095f7 347 Gene3D G3DSA:3.90.180.10 1 153 2.9E-43 T 28-03-2018 AM393_RS07355 6f9979dd42eef49fa2b3d2d7249095f7 347 SUPERFAMILY SSF51735 140 313 9.29E-32 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS07355 6f9979dd42eef49fa2b3d2d7249095f7 347 SMART SM00829 10 344 4.7E-5 T 28-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AM393_RS07355 6f9979dd42eef49fa2b3d2d7249095f7 347 SUPERFAMILY SSF50129 1 170 6.85E-47 T 28-03-2018 IPR011032 GroES-like AM393_RS07355 6f9979dd42eef49fa2b3d2d7249095f7 347 Pfam PF00107 Zinc-binding dehydrogenase 172 306 3.9E-22 T 28-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AM393_RS22690 17f62414a4175a05acec0116c5db21a5 473 Gene3D G3DSA:1.10.1040.10 187 290 1.7E-23 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AM393_RS22690 17f62414a4175a05acec0116c5db21a5 473 Gene3D G3DSA:1.10.1040.10 385 472 5.2E-17 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AM393_RS22690 17f62414a4175a05acec0116c5db21a5 473 SUPERFAMILY SSF48179 187 288 1.02E-26 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AM393_RS22690 17f62414a4175a05acec0116c5db21a5 473 SUPERFAMILY SSF51735 6 187 1.39E-56 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS22690 17f62414a4175a05acec0116c5db21a5 473 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 7 184 5.4E-64 T 28-03-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 AM393_RS22690 17f62414a4175a05acec0116c5db21a5 473 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 188 285 6.0E-28 T 28-03-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 AM393_RS22690 17f62414a4175a05acec0116c5db21a5 473 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 387 466 6.6E-17 T 28-03-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 AM393_RS22690 17f62414a4175a05acec0116c5db21a5 473 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 185 210 - T 28-03-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 AM393_RS22690 17f62414a4175a05acec0116c5db21a5 473 TIGRFAM TIGR02279 PaaC-3OHAcCoADH: 3-hydroxyacyl-CoA dehydrogenase PaaC 3 470 1.9E-215 T 28-03-2018 IPR011967 3-hydroxyacyl-CoA dehydrogenase PaaC GO:0008691|GO:0010124 AM393_RS22690 17f62414a4175a05acec0116c5db21a5 473 Gene3D G3DSA:3.40.50.720 2 186 5.2E-57 T 28-03-2018 AM393_RS22690 17f62414a4175a05acec0116c5db21a5 473 SUPERFAMILY SSF48179 384 464 9.35E-19 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AM393_RS01695 40f477d2d02e235c219e71d48a8e3c22 297 SUPERFAMILY SSF53448 1 274 3.75E-31 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM393_RS01695 40f477d2d02e235c219e71d48a8e3c22 297 Gene3D G3DSA:3.90.550.10 4 224 2.4E-24 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM393_RS01695 40f477d2d02e235c219e71d48a8e3c22 297 Pfam PF00535 Glycosyl transferase family 2 5 118 5.9E-17 T 28-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AM393_RS19810 feff5b5ad393b0c4ee7b2cd8bdf71798 322 SUPERFAMILY SSF52343 109 227 2.36E-24 T 28-03-2018 AM393_RS19810 feff5b5ad393b0c4ee7b2cd8bdf71798 322 Gene3D G3DSA:2.40.30.10 8 105 3.5E-17 T 28-03-2018 AM393_RS19810 feff5b5ad393b0c4ee7b2cd8bdf71798 322 Gene3D G3DSA:3.40.50.80 106 219 1.2E-18 T 28-03-2018 AM393_RS19810 feff5b5ad393b0c4ee7b2cd8bdf71798 322 SUPERFAMILY SSF63380 9 105 9.36E-21 T 28-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AM393_RS19810 feff5b5ad393b0c4ee7b2cd8bdf71798 322 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 248 315 8.2E-14 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AM393_RS19810 feff5b5ad393b0c4ee7b2cd8bdf71798 322 Pfam PF00970 Oxidoreductase FAD-binding domain 35 104 2.0E-7 T 28-03-2018 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 AM393_RS19810 feff5b5ad393b0c4ee7b2cd8bdf71798 322 Gene3D G3DSA:3.10.20.30 220 322 9.7E-22 T 28-03-2018 IPR012675 Beta-grasp domain AM393_RS19810 feff5b5ad393b0c4ee7b2cd8bdf71798 322 Pfam PF00175 Oxidoreductase NAD-binding domain 116 211 2.9E-7 T 28-03-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AM393_RS19810 feff5b5ad393b0c4ee7b2cd8bdf71798 322 SUPERFAMILY SSF54292 221 321 5.51E-25 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AM393_RS19810 feff5b5ad393b0c4ee7b2cd8bdf71798 322 PRINTS PR00409 Phthalate dioxygenase reductase family signature 115 134 4.5E-6 T 28-03-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 AM393_RS19810 feff5b5ad393b0c4ee7b2cd8bdf71798 322 PRINTS PR00409 Phthalate dioxygenase reductase family signature 197 205 4.5E-6 T 28-03-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 AM393_RS19810 feff5b5ad393b0c4ee7b2cd8bdf71798 322 PRINTS PR00409 Phthalate dioxygenase reductase family signature 55 69 4.5E-6 T 28-03-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 AM393_RS03710 adcd9cf61fc5d408085135f3bdf6ebbd 445 Gene3D G3DSA:1.10.8.60 310 382 2.8E-21 T 28-03-2018 AM393_RS03710 adcd9cf61fc5d408085135f3bdf6ebbd 445 SUPERFAMILY SSF46689 350 438 3.85E-8 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS03710 adcd9cf61fc5d408085135f3bdf6ebbd 445 Pfam PF00072 Response regulator receiver domain 10 118 1.4E-29 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM393_RS03710 adcd9cf61fc5d408085135f3bdf6ebbd 445 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 350 359 - T 28-03-2018 IPR025944 Sigma-54 interaction domain, conserved site AM393_RS03710 adcd9cf61fc5d408085135f3bdf6ebbd 445 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 161 174 - T 28-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AM393_RS03710 adcd9cf61fc5d408085135f3bdf6ebbd 445 Gene3D G3DSA:3.40.50.300 137 309 8.1E-25 T 28-03-2018 AM393_RS03710 adcd9cf61fc5d408085135f3bdf6ebbd 445 SUPERFAMILY SSF52172 5 181 6.69E-44 T 28-03-2018 IPR011006 CheY-like superfamily AM393_RS03710 adcd9cf61fc5d408085135f3bdf6ebbd 445 SUPERFAMILY SSF52540 137 380 5.71E-70 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS03710 adcd9cf61fc5d408085135f3bdf6ebbd 445 Gene3D G3DSA:1.10.10.60 383 440 9.9E-9 T 28-03-2018 AM393_RS03710 adcd9cf61fc5d408085135f3bdf6ebbd 445 SMART SM00382 157 300 2.6E-10 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS03710 adcd9cf61fc5d408085135f3bdf6ebbd 445 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 223 238 - T 28-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AM393_RS03710 adcd9cf61fc5d408085135f3bdf6ebbd 445 Pfam PF00158 Sigma-54 interaction domain 137 303 9.8E-72 T 28-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AM393_RS03710 adcd9cf61fc5d408085135f3bdf6ebbd 445 SMART SM00448 7 118 7.9E-34 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM393_RS03710 adcd9cf61fc5d408085135f3bdf6ebbd 445 Gene3D G3DSA:3.40.50.2300 1 136 1.1E-34 T 28-03-2018 AM393_RS04300 9a030ae2b96fa42f9c2b119cbe9316e8 332 Gene3D G3DSA:3.40.190.10 156 327 1.1E-36 T 28-03-2018 AM393_RS04300 9a030ae2b96fa42f9c2b119cbe9316e8 332 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 31 314 6.1E-57 T 28-03-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 AM393_RS04300 9a030ae2b96fa42f9c2b119cbe9316e8 332 SUPERFAMILY SSF53850 25 330 1.47E-95 T 28-03-2018 AM393_RS04300 9a030ae2b96fa42f9c2b119cbe9316e8 332 Gene3D G3DSA:3.40.190.10 23 155 7.0E-19 T 28-03-2018 AM393_RS17990 f9a6b3ff1bac5dff21e55a15a202cdcd 67 SMART SM00923 5 55 1.6E-25 T 28-03-2018 IPR005153 MbtH-like protein AM393_RS17990 f9a6b3ff1bac5dff21e55a15a202cdcd 67 Gene3D G3DSA:3.90.820.10 4 63 1.4E-25 T 28-03-2018 AM393_RS17990 f9a6b3ff1bac5dff21e55a15a202cdcd 67 SUPERFAMILY SSF160582 3 65 2.48E-24 T 28-03-2018 AM393_RS17990 f9a6b3ff1bac5dff21e55a15a202cdcd 67 Pfam PF03621 MbtH-like protein 4 53 1.1E-22 T 28-03-2018 IPR005153 MbtH-like protein AM393_RS09995 becdc2964b7802726f539cee6bf2ac4f 497 Gene3D G3DSA:1.20.1250.20 254 497 1.4E-35 T 28-03-2018 AM393_RS09995 becdc2964b7802726f539cee6bf2ac4f 497 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 16 432 4.6E-80 T 28-03-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 AM393_RS09995 becdc2964b7802726f539cee6bf2ac4f 497 SUPERFAMILY SSF103473 250 422 2.35E-73 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS09995 becdc2964b7802726f539cee6bf2ac4f 497 SUPERFAMILY SSF103473 12 198 2.35E-73 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS09995 becdc2964b7802726f539cee6bf2ac4f 497 SUPERFAMILY SSF103473 462 488 2.35E-73 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS09995 becdc2964b7802726f539cee6bf2ac4f 497 Gene3D G3DSA:1.20.1250.20 14 203 2.6E-36 T 28-03-2018 AM393_RS09995 becdc2964b7802726f539cee6bf2ac4f 497 Pfam PF07690 Major Facilitator Superfamily 20 412 2.0E-54 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS09995 becdc2964b7802726f539cee6bf2ac4f 497 PRINTS PR01036 Tetracycline resistance protein TetB signature 109 129 1.4E-10 T 28-03-2018 AM393_RS09995 becdc2964b7802726f539cee6bf2ac4f 497 PRINTS PR01036 Tetracycline resistance protein TetB signature 204 222 1.4E-10 T 28-03-2018 AM393_RS09995 becdc2964b7802726f539cee6bf2ac4f 497 PRINTS PR01036 Tetracycline resistance protein TetB signature 19 43 1.4E-10 T 28-03-2018 AM393_RS09995 becdc2964b7802726f539cee6bf2ac4f 497 PRINTS PR01036 Tetracycline resistance protein TetB signature 139 163 1.4E-10 T 28-03-2018 AM393_RS01615 97c71c1f1f7780ccbc628d904a4b9902 474 SUPERFAMILY SSF53098 9 473 1.11E-133 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM393_RS01615 97c71c1f1f7780ccbc628d904a4b9902 474 Gene3D G3DSA:3.30.420.10 1 200 7.4E-28 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM393_RS01615 97c71c1f1f7780ccbc628d904a4b9902 474 PIRSF PIRSF000977 2 474 1.2E-198 T 28-03-2018 IPR023607 Exodeoxyribonuclease I GO:0004529 AM393_RS01615 97c71c1f1f7780ccbc628d904a4b9902 474 Pfam PF08411 Exonuclease C-terminal 211 471 1.2E-100 T 28-03-2018 IPR013620 Exodeoxyribonuclease I, C-terminal GO:0006281|GO:0008852 AM393_RS01615 97c71c1f1f7780ccbc628d904a4b9902 474 SMART SM00479 9 202 0.0016 T 28-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AM393_RS01615 97c71c1f1f7780ccbc628d904a4b9902 474 Pfam PF00929 Exonuclease 12 189 4.9E-29 T 28-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AM393_RS03870 2f2c0e2adc43ca4d29d9bbb4c480a77f 107 PIRSF PIRSF034456 1 106 4.0E-57 T 28-03-2018 IPR017028 Uncharacterised conserved protein UCP034456 AM393_RS03870 2f2c0e2adc43ca4d29d9bbb4c480a77f 107 Pfam PF10043 Predicted periplasmic lipoprotein (DUF2279) 24 99 1.2E-9 T 28-03-2018 IPR018736 Protein of unknown function DUF2279, periplasmic lipoprotein AM393_RS23385 bc86685c971832e3432abfa87a1edcba 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 1.7E-7 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM393_RS23385 bc86685c971832e3432abfa87a1edcba 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 1.7E-7 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM393_RS23385 bc86685c971832e3432abfa87a1edcba 253 SMART SM01134 73 233 2.0E-67 T 28-03-2018 AM393_RS23385 bc86685c971832e3432abfa87a1edcba 253 Pfam PF00455 DeoR C terminal sensor domain 75 232 2.3E-50 T 28-03-2018 IPR014036 DeoR C-terminal sensor domain AM393_RS23385 bc86685c971832e3432abfa87a1edcba 253 SUPERFAMILY SSF46785 5 69 6.52E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS23385 bc86685c971832e3432abfa87a1edcba 253 Pfam PF08220 DeoR-like helix-turn-helix domain 6 60 1.1E-17 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM393_RS23385 bc86685c971832e3432abfa87a1edcba 253 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 28-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 AM393_RS23385 bc86685c971832e3432abfa87a1edcba 253 Gene3D G3DSA:3.40.50.1360 66 232 3.9E-34 T 28-03-2018 AM393_RS23385 bc86685c971832e3432abfa87a1edcba 253 SMART SM00420 6 58 2.6E-22 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM393_RS23385 bc86685c971832e3432abfa87a1edcba 253 SUPERFAMILY SSF100950 75 233 3.24E-28 T 28-03-2018 AM393_RS23385 bc86685c971832e3432abfa87a1edcba 253 Gene3D G3DSA:1.10.10.10 3 64 6.9E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS02355 2a71d854ed9132aa495b64f658dda89a 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 1.3E-9 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM393_RS02355 2a71d854ed9132aa495b64f658dda89a 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 1.3E-9 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM393_RS02355 2a71d854ed9132aa495b64f658dda89a 253 SUPERFAMILY SSF100950 73 230 6.59E-25 T 28-03-2018 AM393_RS02355 2a71d854ed9132aa495b64f658dda89a 253 Pfam PF08220 DeoR-like helix-turn-helix domain 6 57 2.2E-15 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM393_RS02355 2a71d854ed9132aa495b64f658dda89a 253 SMART SM00420 6 58 2.8E-14 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM393_RS02355 2a71d854ed9132aa495b64f658dda89a 253 SUPERFAMILY SSF46785 4 60 6.08E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS02355 2a71d854ed9132aa495b64f658dda89a 253 Gene3D G3DSA:1.10.10.10 1 59 3.6E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS02355 2a71d854ed9132aa495b64f658dda89a 253 Gene3D G3DSA:3.40.50.1360 63 251 3.9E-35 T 28-03-2018 AM393_RS02355 2a71d854ed9132aa495b64f658dda89a 253 Pfam PF00455 DeoR C terminal sensor domain 74 230 1.3E-42 T 28-03-2018 IPR014036 DeoR C-terminal sensor domain AM393_RS02355 2a71d854ed9132aa495b64f658dda89a 253 SMART SM01134 71 232 4.8E-59 T 28-03-2018 AM393_RS12665 6dec546eaac3755bb7a08cfc81f42789 342 TIGRFAM TIGR00238 TIGR00238: KamA family protein 3 328 2.5E-145 T 28-03-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase AM393_RS12665 6dec546eaac3755bb7a08cfc81f42789 342 TIGRFAM TIGR03821 EFP_modif_epmB: EF-P beta-lysylation protein EpmB 15 335 1.4E-157 T 28-03-2018 IPR022462 Lysine-2,3-aminomutase-like AM393_RS12665 6dec546eaac3755bb7a08cfc81f42789 342 Gene3D G3DSA:3.20.20.70 101 329 1.4E-20 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM393_RS12665 6dec546eaac3755bb7a08cfc81f42789 342 SUPERFAMILY SSF102114 102 324 1.7E-27 T 28-03-2018 AM393_RS12665 6dec546eaac3755bb7a08cfc81f42789 342 Pfam PF13353 4Fe-4S single cluster domain 111 176 5.6E-6 T 28-03-2018 AM393_RS12665 6dec546eaac3755bb7a08cfc81f42789 342 PIRSF PIRSF004911 1 342 4.4E-125 T 28-03-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase AM393_RS12665 6dec546eaac3755bb7a08cfc81f42789 342 Pfam PF04055 Radical SAM superfamily 118 263 1.9E-8 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AM393_RS02070 64d2a24052946516c30fa3e65b86f124 581 PIRSF PIRSF000101 4 569 8.1E-304 T 28-03-2018 IPR012256 D-lactate dehydrogenase GO:0004457|GO:0005887|GO:0006089|GO:0050660|GO:0051287 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 AM393_RS02070 64d2a24052946516c30fa3e65b86f124 581 Gene3D G3DSA:3.30.465.10 107 268 1.4E-78 T 28-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AM393_RS02070 64d2a24052946516c30fa3e65b86f124 581 Gene3D G3DSA:3.30.43.10 1 103 1.1E-11 T 28-03-2018 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 AM393_RS02070 64d2a24052946516c30fa3e65b86f124 581 Gene3D G3DSA:3.30.1370.20 435 518 1.2E-43 T 28-03-2018 IPR016173 D-lactate dehydrogenase, C-terminal subdomain 2 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 AM393_RS02070 64d2a24052946516c30fa3e65b86f124 581 Gene3D G3DSA:3.30.70.610 349 434 2.1E-30 T 28-03-2018 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 AM393_RS02070 64d2a24052946516c30fa3e65b86f124 581 Gene3D G3DSA:3.30.70.610 269 348 7.0E-22 T 28-03-2018 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 AM393_RS02070 64d2a24052946516c30fa3e65b86f124 581 SUPERFAMILY SSF56176 10 271 3.41E-75 T 28-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AM393_RS02070 64d2a24052946516c30fa3e65b86f124 581 Pfam PF01565 FAD binding domain 47 170 1.4E-8 T 28-03-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 AM393_RS02070 64d2a24052946516c30fa3e65b86f124 581 SUPERFAMILY SSF55103 276 567 9.59E-118 T 28-03-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 AM393_RS02070 64d2a24052946516c30fa3e65b86f124 581 Pfam PF09330 D-lactate dehydrogenase, membrane binding 278 567 4.4E-149 T 28-03-2018 IPR015409 D-lactate dehydrogenase, membrane binding, C-terminal GO:0050660|GO:0055085 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 AM393_RS10945 1fb60aacfa11268c3b16c090308a60cc 232 SMART SM00862 152 228 2.1E-22 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM393_RS10945 1fb60aacfa11268c3b16c090308a60cc 232 Gene3D G3DSA:1.10.10.10 120 232 7.3E-27 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS10945 1fb60aacfa11268c3b16c090308a60cc 232 SMART SM00448 2 111 2.6E-45 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM393_RS10945 1fb60aacfa11268c3b16c090308a60cc 232 Pfam PF00072 Response regulator receiver domain 4 112 3.3E-29 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM393_RS10945 1fb60aacfa11268c3b16c090308a60cc 232 Gene3D G3DSA:3.40.50.2300 2 119 2.9E-38 T 28-03-2018 AM393_RS10945 1fb60aacfa11268c3b16c090308a60cc 232 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 228 2.5E-21 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM393_RS10945 1fb60aacfa11268c3b16c090308a60cc 232 SUPERFAMILY SSF52172 2 188 6.55E-41 T 28-03-2018 IPR011006 CheY-like superfamily AM393_RS12535 877bf8172f137f367cf095e4ba18fb6f 822 Gene3D G3DSA:1.25.40.10 61 225 2.2E-7 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM393_RS12535 877bf8172f137f367cf095e4ba18fb6f 822 Gene3D G3DSA:2.40.160.40 549 802 0.0013 T 28-03-2018 AM393_RS12535 877bf8172f137f367cf095e4ba18fb6f 822 Pfam PF04575 Protein of unknown function (DUF560) 619 724 1.0E-4 T 28-03-2018 IPR007655 Protein of unknown function DUF560 AM393_RS12535 877bf8172f137f367cf095e4ba18fb6f 822 TIGRFAM TIGR03939 PGA_TPR_OMP: poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA 25 822 9.5E-292 T 28-03-2018 IPR023870 Poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA GO:0022891|GO:0042710 AM393_RS12535 877bf8172f137f367cf095e4ba18fb6f 822 Gene3D G3DSA:1.25.20.10 291 537 4.2E-5 T 28-03-2018 AM393_RS05510 ea67d887924c23547098066633c3252c 108 PIRSF PIRSF029883 1 108 9.5E-36 T 28-03-2018 IPR025499 Pectin degradation protein KdgF AM393_RS05510 ea67d887924c23547098066633c3252c 108 SUPERFAMILY SSF51182 9 100 4.46E-25 T 28-03-2018 IPR011051 RmlC-like cupin domain AM393_RS05510 ea67d887924c23547098066633c3252c 108 Gene3D G3DSA:2.60.120.10 1 108 1.6E-25 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AM393_RS05510 ea67d887924c23547098066633c3252c 108 Pfam PF07883 Cupin domain 33 88 1.2E-14 T 28-03-2018 IPR013096 Cupin 2, conserved barrel AM393_RS27875 4cc359db6f401bb185db4e63de3de989 1911 SUPERFAMILY SSF52980 1671 1782 1.72E-17 T 28-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AM393_RS27875 4cc359db6f401bb185db4e63de3de989 1911 Pfam PF04480 Protein of unknown function (DUF559) 1701 1780 3.4E-5 T 28-03-2018 IPR007569 Domain of unknown function DUF559 AM393_RS27875 4cc359db6f401bb185db4e63de3de989 1911 SUPERFAMILY SSF52540 1378 1635 3.93E-24 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS27875 4cc359db6f401bb185db4e63de3de989 1911 Gene3D G3DSA:3.40.50.300 1458 1653 3.0E-17 T 28-03-2018 AM393_RS27875 4cc359db6f401bb185db4e63de3de989 1911 SMART SM00952 1726 1780 0.0025 T 28-03-2018 IPR013584 RAP domain AM393_RS27875 4cc359db6f401bb185db4e63de3de989 1911 Pfam PF13086 AAA domain 1378 1420 1.5E-7 T 28-03-2018 AM393_RS27875 4cc359db6f401bb185db4e63de3de989 1911 SUPERFAMILY SSF52540 918 962 2.67E-16 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS27875 4cc359db6f401bb185db4e63de3de989 1911 SUPERFAMILY SSF52540 427 614 2.67E-16 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS27875 4cc359db6f401bb185db4e63de3de989 1911 Pfam PF13087 AAA domain 1456 1637 7.5E-11 T 28-03-2018 AM393_RS27875 4cc359db6f401bb185db4e63de3de989 1911 Gene3D G3DSA:3.40.50.300 425 1422 8.6E-42 T 28-03-2018 AM393_RS27875 4cc359db6f401bb185db4e63de3de989 1911 Pfam PF13195 Protein of unknown function (DUF4011) 30 308 1.2E-41 T 28-03-2018 IPR025103 Protein of unknown function DUF4011 AM393_RS27875 4cc359db6f401bb185db4e63de3de989 1911 Gene3D G3DSA:3.40.960.10 1680 1792 1.9E-28 T 28-03-2018 AM393_RS25875 b6d5079368aa92538266c0c16eca3778 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 2.6E-40 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS25875 b6d5079368aa92538266c0c16eca3778 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 2.6E-40 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS25875 b6d5079368aa92538266c0c16eca3778 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 2.6E-40 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS25875 b6d5079368aa92538266c0c16eca3778 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 2.6E-40 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS25875 b6d5079368aa92538266c0c16eca3778 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 2.6E-40 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS25875 b6d5079368aa92538266c0c16eca3778 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 2.6E-40 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS25875 b6d5079368aa92538266c0c16eca3778 256 SUPERFAMILY SSF51735 2 254 3.78E-82 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS25875 b6d5079368aa92538266c0c16eca3778 256 Pfam PF00106 short chain dehydrogenase 3 196 5.7E-63 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS25875 b6d5079368aa92538266c0c16eca3778 256 TIGRFAM TIGR02415 23BDH: acetoin reductases 3 256 5.2E-128 T 28-03-2018 IPR014007 Acetoin reductase GO:0019152|GO:0045150|GO:0055114 KEGG: 00072+1.1.1.30|KEGG: 00650+1.1.1.304+1.1.1.30|MetaCyc: PWY-6389 AM393_RS25875 b6d5079368aa92538266c0c16eca3778 256 Gene3D G3DSA:3.40.50.720 1 39 2.1E-8 T 28-03-2018 AM393_RS25875 b6d5079368aa92538266c0c16eca3778 256 Gene3D G3DSA:3.40.50.720 40 256 8.5E-64 T 28-03-2018 AM393_RS25875 b6d5079368aa92538266c0c16eca3778 256 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 183 0.0075 T 28-03-2018 AM393_RS25875 b6d5079368aa92538266c0c16eca3778 256 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM393_RS25875 b6d5079368aa92538266c0c16eca3778 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 6.2E-11 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS25875 b6d5079368aa92538266c0c16eca3778 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 6.2E-11 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS25875 b6d5079368aa92538266c0c16eca3778 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 6.2E-11 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS14930 c0a2a94509ce6808df4f461f2a021e2e 143 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 25 1.5E-10 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site AM393_RS14930 c0a2a94509ce6808df4f461f2a021e2e 143 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 27 1.7E-9 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site AM393_RS14930 c0a2a94509ce6808df4f461f2a021e2e 143 Gene3D G3DSA:3.30.700.10 7 139 3.4E-25 T 28-03-2018 AM393_RS14930 c0a2a94509ce6808df4f461f2a021e2e 143 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site AM393_RS14930 c0a2a94509ce6808df4f461f2a021e2e 143 PRINTS PR00813 Bacterial general secretion pathway protein G signature 6 31 5.5E-7 T 28-03-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 AM393_RS14930 c0a2a94509ce6808df4f461f2a021e2e 143 PRINTS PR00813 Bacterial general secretion pathway protein G signature 42 60 5.5E-7 T 28-03-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 AM393_RS14930 c0a2a94509ce6808df4f461f2a021e2e 143 SUPERFAMILY SSF54523 7 113 1.67E-23 T 28-03-2018 AM393_RS22895 a632f2b8951ab2489127d368263a97b5 466 Pfam PF10415 Fumarase C C-terminus 408 461 1.0E-24 T 28-03-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AM393_RS22895 a632f2b8951ab2489127d368263a97b5 466 Hamap MF_00743 Fumarate hydratase class II [fumC]. 4 462 91.876 T 28-03-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AM393_RS22895 a632f2b8951ab2489127d368263a97b5 466 Gene3D G3DSA:1.10.40.30 418 462 4.8E-25 T 28-03-2018 AM393_RS22895 a632f2b8951ab2489127d368263a97b5 466 Pfam PF00206 Lyase 12 342 6.9E-121 T 28-03-2018 IPR022761 Fumarate lyase, N-terminal AM393_RS22895 a632f2b8951ab2489127d368263a97b5 466 ProSitePatterns PS00163 Fumarate lyases signature. 317 326 - T 28-03-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 AM393_RS22895 a632f2b8951ab2489127d368263a97b5 466 SUPERFAMILY SSF48557 5 459 2.67E-157 T 28-03-2018 IPR008948 L-Aspartase-like GO:0003824 AM393_RS22895 a632f2b8951ab2489127d368263a97b5 466 Gene3D G3DSA:1.20.200.10 139 417 1.7E-88 T 28-03-2018 AM393_RS22895 a632f2b8951ab2489127d368263a97b5 466 Gene3D G3DSA:1.10.275.10 2 138 1.6E-60 T 28-03-2018 IPR024083 Fumarase/histidase, N-terminal AM393_RS22895 a632f2b8951ab2489127d368263a97b5 466 PRINTS PR00149 Fumarate lyase superfamily signature 134 152 5.4E-34 T 28-03-2018 IPR000362 Fumarate lyase family AM393_RS22895 a632f2b8951ab2489127d368263a97b5 466 PRINTS PR00149 Fumarate lyase superfamily signature 271 298 5.4E-34 T 28-03-2018 IPR000362 Fumarate lyase family AM393_RS22895 a632f2b8951ab2489127d368263a97b5 466 PRINTS PR00149 Fumarate lyase superfamily signature 180 198 5.4E-34 T 28-03-2018 IPR000362 Fumarate lyase family AM393_RS22895 a632f2b8951ab2489127d368263a97b5 466 PRINTS PR00149 Fumarate lyase superfamily signature 317 333 5.4E-34 T 28-03-2018 IPR000362 Fumarate lyase family AM393_RS22895 a632f2b8951ab2489127d368263a97b5 466 TIGRFAM TIGR00979 fumC_II: fumarate hydratase, class II 4 461 5.4E-248 T 28-03-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AM393_RS18075 a8c5a9539467418d9041d73e10872a8b 362 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 152 180 - T 28-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 AM393_RS18075 a8c5a9539467418d9041d73e10872a8b 362 Gene3D G3DSA:1.20.1090.10 162 362 2.3E-29 T 28-03-2018 AM393_RS18075 a8c5a9539467418d9041d73e10872a8b 362 PIRSF PIRSF000112 2 362 1.3E-118 T 28-03-2018 AM393_RS18075 a8c5a9539467418d9041d73e10872a8b 362 Pfam PF00465 Iron-containing alcohol dehydrogenase 12 348 3.7E-46 T 28-03-2018 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 AM393_RS18075 a8c5a9539467418d9041d73e10872a8b 362 Gene3D G3DSA:3.40.50.1970 1 159 1.3E-18 T 28-03-2018 AM393_RS18075 a8c5a9539467418d9041d73e10872a8b 362 SUPERFAMILY SSF56796 11 358 2.09E-57 T 28-03-2018 AM393_RS17505 18af83fcf8c56a67d475ea8ebb5dc334 392 Pfam PF07687 Peptidase dimerisation domain 188 285 6.4E-10 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain AM393_RS17505 18af83fcf8c56a67d475ea8ebb5dc334 392 Gene3D G3DSA:3.40.630.10 2 226 2.6E-47 T 28-03-2018 AM393_RS17505 18af83fcf8c56a67d475ea8ebb5dc334 392 Gene3D G3DSA:3.40.630.10 227 392 6.9E-21 T 28-03-2018 AM393_RS17505 18af83fcf8c56a67d475ea8ebb5dc334 392 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 16 379 1.5E-108 T 28-03-2018 IPR017439 Amidohydrolase GO:0016787 AM393_RS17505 18af83fcf8c56a67d475ea8ebb5dc334 392 SUPERFAMILY SSF55031 187 290 8.9E-29 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain AM393_RS17505 18af83fcf8c56a67d475ea8ebb5dc334 392 SUPERFAMILY SSF53187 301 390 4.71E-86 T 28-03-2018 AM393_RS17505 18af83fcf8c56a67d475ea8ebb5dc334 392 SUPERFAMILY SSF53187 4 200 4.71E-86 T 28-03-2018 AM393_RS17505 18af83fcf8c56a67d475ea8ebb5dc334 392 PIRSF PIRSF005962 1 392 1.4E-127 T 28-03-2018 IPR017439 Amidohydrolase GO:0016787 AM393_RS17505 18af83fcf8c56a67d475ea8ebb5dc334 392 Pfam PF01546 Peptidase family M20/M25/M40 75 388 7.7E-34 T 28-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 AM393_RS05580 e2d4041327ce33c30e22cadb3a369b45 289 Gene3D G3DSA:3.40.190.10 183 259 2.7E-10 T 28-03-2018 AM393_RS05580 e2d4041327ce33c30e22cadb3a369b45 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 6.8E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS05580 e2d4041327ce33c30e22cadb3a369b45 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 6.8E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS05580 e2d4041327ce33c30e22cadb3a369b45 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 6.8E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS05580 e2d4041327ce33c30e22cadb3a369b45 289 Pfam PF03466 LysR substrate binding domain 89 287 7.8E-25 T 28-03-2018 IPR005119 LysR, substrate-binding AM393_RS05580 e2d4041327ce33c30e22cadb3a369b45 289 SUPERFAMILY SSF46785 6 88 4.38E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS05580 e2d4041327ce33c30e22cadb3a369b45 289 Gene3D G3DSA:1.10.10.10 1 84 3.5E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS05580 e2d4041327ce33c30e22cadb3a369b45 289 SUPERFAMILY SSF53850 91 287 7.6E-28 T 28-03-2018 AM393_RS05580 e2d4041327ce33c30e22cadb3a369b45 289 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 5.2E-19 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS05580 e2d4041327ce33c30e22cadb3a369b45 289 Gene3D G3DSA:3.40.190.10 90 182 1.9E-12 T 28-03-2018 AM393_RS05880 d5adc52926d6096bd93aa3d987b9022a 327 PIRSF PIRSF006487 20 287 1.6E-10 T 28-03-2018 AM393_RS05880 d5adc52926d6096bd93aa3d987b9022a 327 SUPERFAMILY SSF101790 244 325 6.28E-26 T 28-03-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain AM393_RS05880 d5adc52926d6096bd93aa3d987b9022a 327 SUPERFAMILY SSF103025 8 242 1.35E-67 T 28-03-2018 AM393_RS05880 d5adc52926d6096bd93aa3d987b9022a 327 Gene3D G3DSA:3.30.70.1400 27 240 2.5E-25 T 28-03-2018 AM393_RS05880 d5adc52926d6096bd93aa3d987b9022a 327 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 187 252 4.7E-26 T 28-03-2018 IPR017703 YgfZ/GcvT conserved site AM393_RS05880 d5adc52926d6096bd93aa3d987b9022a 327 Hamap MF_01175 tRNA-modifying protein YgfZ [ygfZ]. 1 321 48.022 T 28-03-2018 IPR023758 tRNA-modifying protein YgfZ GO:0005542|GO:0009451 AM393_RS05880 d5adc52926d6096bd93aa3d987b9022a 327 Pfam PF01571 Aminomethyltransferase folate-binding domain 31 137 2.1E-9 T 28-03-2018 IPR006222 Glycine cleavage T-protein-like, N-terminal AM393_RS11325 ef8e99cac3df7c5d1bea337a046d9f10 376 Gene3D G3DSA:3.90.1150.10 243 376 5.9E-24 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM393_RS11325 ef8e99cac3df7c5d1bea337a046d9f10 376 SUPERFAMILY SSF53383 2 375 4.03E-99 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM393_RS11325 ef8e99cac3df7c5d1bea337a046d9f10 376 PIRSF PIRSF000390 1 376 8.5E-119 T 28-03-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase AM393_RS11325 ef8e99cac3df7c5d1bea337a046d9f10 376 TIGRFAM TIGR02379 ECA_wecE: TDP-4-keto-6-deoxy-D-glucose transaminase 1 376 5.0E-219 T 28-03-2018 IPR012749 dTDP-4-amino-4,6-dideoxygalactose transaminase WecE-like MetaCyc: PWY-7315 AM393_RS11325 ef8e99cac3df7c5d1bea337a046d9f10 376 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 13 371 1.2E-84 T 28-03-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase AM393_RS11325 ef8e99cac3df7c5d1bea337a046d9f10 376 Hamap MF_02026 dTDP-4-amino-4,6-dideoxygalactose transaminase [wecE]. 1 376 78.183 T 28-03-2018 IPR032894 dTDP-4-amino-4,6-dideoxygalactose transaminase WecE GO:0009246|GO:0019180 MetaCyc: PWY-7315 AM393_RS11325 ef8e99cac3df7c5d1bea337a046d9f10 376 Gene3D G3DSA:3.40.640.10 1 242 2.6E-45 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM393_RS11445 f32adff1f6658194de581beae5a3997f 297 Pfam PF00892 EamA-like transporter family 8 142 5.6E-16 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM393_RS11445 f32adff1f6658194de581beae5a3997f 297 SUPERFAMILY SSF103481 42 145 1.44E-14 T 28-03-2018 AM393_RS11445 f32adff1f6658194de581beae5a3997f 297 SUPERFAMILY SSF103481 208 284 2.88E-7 T 28-03-2018 AM393_RS11445 f32adff1f6658194de581beae5a3997f 297 TIGRFAM TIGR00688 rarD: protein RarD 9 261 2.9E-108 T 28-03-2018 IPR004626 RarD protein GO:0005215|GO:0005887|GO:0006810 AM393_RS23405 72a3fdc7d64d3cf5a0eaa0fbc6eeac42 421 Gene3D G3DSA:1.20.1250.20 211 419 4.2E-19 T 28-03-2018 AM393_RS23405 72a3fdc7d64d3cf5a0eaa0fbc6eeac42 421 PRINTS PR00174 LacY proton/sugar symporter family signature 73 102 1.4E-97 T 28-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 AM393_RS23405 72a3fdc7d64d3cf5a0eaa0fbc6eeac42 421 PRINTS PR00174 LacY proton/sugar symporter family signature 265 286 1.4E-97 T 28-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 AM393_RS23405 72a3fdc7d64d3cf5a0eaa0fbc6eeac42 421 PRINTS PR00174 LacY proton/sugar symporter family signature 219 247 1.4E-97 T 28-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 AM393_RS23405 72a3fdc7d64d3cf5a0eaa0fbc6eeac42 421 PRINTS PR00174 LacY proton/sugar symporter family signature 289 315 1.4E-97 T 28-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 AM393_RS23405 72a3fdc7d64d3cf5a0eaa0fbc6eeac42 421 PRINTS PR00174 LacY proton/sugar symporter family signature 320 339 1.4E-97 T 28-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 AM393_RS23405 72a3fdc7d64d3cf5a0eaa0fbc6eeac42 421 PRINTS PR00174 LacY proton/sugar symporter family signature 351 371 1.4E-97 T 28-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 AM393_RS23405 72a3fdc7d64d3cf5a0eaa0fbc6eeac42 421 PRINTS PR00174 LacY proton/sugar symporter family signature 108 130 1.4E-97 T 28-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 AM393_RS23405 72a3fdc7d64d3cf5a0eaa0fbc6eeac42 421 PRINTS PR00174 LacY proton/sugar symporter family signature 150 168 1.4E-97 T 28-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 AM393_RS23405 72a3fdc7d64d3cf5a0eaa0fbc6eeac42 421 Gene3D G3DSA:1.20.1250.20 9 206 7.6E-26 T 28-03-2018 AM393_RS23405 72a3fdc7d64d3cf5a0eaa0fbc6eeac42 421 TIGRFAM TIGR00882 2A0105: oligosaccharide:H+ symporter 12 405 3.3E-199 T 28-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 AM393_RS23405 72a3fdc7d64d3cf5a0eaa0fbc6eeac42 421 ProSitePatterns PS00896 LacY family proton/sugar symporters signature 1. 69 83 - T 28-03-2018 IPR018457 LacY/RafB permease family, conserved site GO:0006810|GO:0016020 AM393_RS23405 72a3fdc7d64d3cf5a0eaa0fbc6eeac42 421 Pfam PF01306 LacY proton/sugar symporter 7 409 1.2E-206 T 28-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 AM393_RS23405 72a3fdc7d64d3cf5a0eaa0fbc6eeac42 421 SUPERFAMILY SSF103473 9 406 9.42E-49 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS26725 aec117f1e7a12d4b7404553d2054b049 511 Gene3D G3DSA:3.30.70.20 198 236 1.6E-19 T 28-03-2018 AM393_RS26725 aec117f1e7a12d4b7404553d2054b049 511 Gene3D G3DSA:3.30.70.20 237 364 3.2E-31 T 28-03-2018 AM393_RS26725 aec117f1e7a12d4b7404553d2054b049 511 Gene3D G3DSA:3.30.70.20 365 466 4.5E-31 T 28-03-2018 AM393_RS26725 aec117f1e7a12d4b7404553d2054b049 511 Gene3D G3DSA:3.30.70.20 5 197 1.6E-28 T 28-03-2018 AM393_RS26725 aec117f1e7a12d4b7404553d2054b049 511 Pfam PF13247 4Fe-4S dicluster domain 175 271 2.0E-37 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM393_RS26725 aec117f1e7a12d4b7404553d2054b049 511 SUPERFAMILY SSF54862 1 503 6.49E-184 T 28-03-2018 AM393_RS26725 aec117f1e7a12d4b7404553d2054b049 511 TIGRFAM TIGR01660 narH: nitrate reductase, beta subunit 1 492 0.0 T 28-03-2018 IPR006547 Nitrate reductase, beta subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.99.4 AM393_RS26725 aec117f1e7a12d4b7404553d2054b049 511 Pfam PF14711 Respiratory nitrate reductase beta C-terminal 358 436 4.4E-30 T 28-03-2018 IPR029263 Respiratory nitrate reductase beta, C-terminal KEGG: 00910+1.7.99.4 AM393_RS08420 3f56b97810f307005741b71ce4f741dd 187 Gene3D G3DSA:3.40.50.360 1 181 8.5E-31 T 28-03-2018 IPR029039 Flavoprotein-like domain AM393_RS08420 3f56b97810f307005741b71ce4f741dd 187 Hamap MF_01415 Glutathione-regulated potassium-efflux system ancillary protein KefG [kefG]. 2 182 46.484 T 28-03-2018 IPR023947 Glutathione-regulated potassium-efflux system ancillary protein KefG GO:0006813 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 AM393_RS08420 3f56b97810f307005741b71ce4f741dd 187 SUPERFAMILY SSF52218 7 176 6.98E-46 T 28-03-2018 IPR029039 Flavoprotein-like domain AM393_RS08420 3f56b97810f307005741b71ce4f741dd 187 Pfam PF02525 Flavodoxin-like fold 7 168 2.1E-37 T 28-03-2018 IPR003680 Flavodoxin-like fold AM393_RS18845 6d0ba91387dbf271c016b3fda4594e2e 490 Pfam PF00005 ABC transporter 277 429 1.3E-25 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS18845 6d0ba91387dbf271c016b3fda4594e2e 490 Pfam PF00005 ABC transporter 23 163 5.3E-18 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS18845 6d0ba91387dbf271c016b3fda4594e2e 490 Gene3D G3DSA:3.40.50.300 2 236 2.3E-33 T 28-03-2018 AM393_RS18845 6d0ba91387dbf271c016b3fda4594e2e 490 Gene3D G3DSA:3.40.50.300 248 488 7.7E-41 T 28-03-2018 AM393_RS18845 6d0ba91387dbf271c016b3fda4594e2e 490 SUPERFAMILY SSF52540 4 225 1.55E-36 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS18845 6d0ba91387dbf271c016b3fda4594e2e 490 SUPERFAMILY SSF52540 260 475 1.18E-38 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS18845 6d0ba91387dbf271c016b3fda4594e2e 490 SMART SM00382 285 479 1.2E-7 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS18845 6d0ba91387dbf271c016b3fda4594e2e 490 SMART SM00382 28 218 1.7E-7 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS15020 4a1f674b0300b2844125dae1ec060cb3 286 Gene3D G3DSA:3.40.50.150 55 286 3.0E-45 T 28-03-2018 AM393_RS15020 4a1f674b0300b2844125dae1ec060cb3 286 ProSitePatterns PS01330 Polyamine biosynthesis (PABS) domain signature. 81 94 - T 28-03-2018 IPR030373 Polyamine biosynthesis domain, conserved site KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 AM393_RS15020 4a1f674b0300b2844125dae1ec060cb3 286 SUPERFAMILY SSF53335 7 283 1.91E-90 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM393_RS15020 4a1f674b0300b2844125dae1ec060cb3 286 Pfam PF01564 Spermine/spermidine synthase domain 60 239 3.5E-66 T 28-03-2018 AM393_RS15020 4a1f674b0300b2844125dae1ec060cb3 286 Gene3D G3DSA:2.30.140.10 2 54 2.7E-16 T 28-03-2018 IPR035246 Spermidine synthase, tetramerisation domain KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 AM393_RS15020 4a1f674b0300b2844125dae1ec060cb3 286 TIGRFAM TIGR00417 speE: spermidine synthase 7 278 6.5E-122 T 28-03-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 AM393_RS15020 4a1f674b0300b2844125dae1ec060cb3 286 Hamap MF_00198 Polyamine aminopropyltransferase [speE]. 6 284 39.0 T 28-03-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 AM393_RS15020 4a1f674b0300b2844125dae1ec060cb3 286 Pfam PF17284 Spermidine synthase tetramerisation domain 6 57 9.8E-20 T 28-03-2018 IPR035246 Spermidine synthase, tetramerisation domain KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 AM393_RS01255 3bc76440bc87433108561e7a1fba5c85 3163 Gene3D G3DSA:3.40.366.10 734 854 5.5E-23 T 28-03-2018 AM393_RS01255 3bc76440bc87433108561e7a1fba5c85 3163 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 404 515 1.4E-13 T 28-03-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 AM393_RS01255 3bc76440bc87433108561e7a1fba5c85 3163 SUPERFAMILY SSF53335 1060 1250 1.36E-29 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM393_RS01255 3bc76440bc87433108561e7a1fba5c85 3163 SUPERFAMILY SSF53335 2575 2750 4.8E-23 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM393_RS01255 3bc76440bc87433108561e7a1fba5c85 3163 SUPERFAMILY SSF51735 1557 1786 2.7E-29 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS01255 3bc76440bc87433108561e7a1fba5c85 3163 SUPERFAMILY SSF52151 550 677 2.04E-60 T 28-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 AM393_RS01255 3bc76440bc87433108561e7a1fba5c85 3163 SUPERFAMILY SSF52151 738 835 2.04E-60 T 28-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 AM393_RS01255 3bc76440bc87433108561e7a1fba5c85 3163 Gene3D G3DSA:3.30.70.250 682 733 5.8E-13 T 28-03-2018 AM393_RS01255 3bc76440bc87433108561e7a1fba5c85 3163 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 553 844 1.5E-78 T 28-03-2018 IPR020801 Polyketide synthase, acyl transferase domain AM393_RS01255 3bc76440bc87433108561e7a1fba5c85 3163 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 285 401 1.1E-39 T 28-03-2018 IPR014031 Beta-ketoacyl synthase, C-terminal AM393_RS01255 3bc76440bc87433108561e7a1fba5c85 3163 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1848 1863 - T 28-03-2018 IPR006162 Phosphopantetheine attachment site AM393_RS01255 3bc76440bc87433108561e7a1fba5c85 3163 SUPERFAMILY SSF47336 1817 1928 7.85E-13 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain AM393_RS01255 3bc76440bc87433108561e7a1fba5c85 3163 SUPERFAMILY SSF52777 1911 2109 3.78E-23 T 28-03-2018 AM393_RS01255 3bc76440bc87433108561e7a1fba5c85 3163 Gene3D G3DSA:3.40.47.10 19 288 3.5E-67 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM393_RS01255 3bc76440bc87433108561e7a1fba5c85 3163 Gene3D G3DSA:3.40.50.1820 2903 3158 1.4E-18 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AM393_RS01255 3bc76440bc87433108561e7a1fba5c85 3163 SMART SM00823 Phosphopantetheine attachment site 2830 2898 0.0025 T 28-03-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 AM393_RS01255 3bc76440bc87433108561e7a1fba5c85 3163 SMART SM00823 Phosphopantetheine attachment site 1821 1893 8.8E-4 T 28-03-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 AM393_RS01255 3bc76440bc87433108561e7a1fba5c85 3163 SUPERFAMILY SSF55048 675 736 1.44E-6 T 28-03-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 AM393_RS01255 3bc76440bc87433108561e7a1fba5c85 3163 Pfam PF08659 KR domain 1560 1729 4.7E-37 T 28-03-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 AM393_RS01255 3bc76440bc87433108561e7a1fba5c85 3163 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 27 276 2.2E-74 T 28-03-2018 IPR014030 Beta-ketoacyl synthase, N-terminal AM393_RS01255 3bc76440bc87433108561e7a1fba5c85 3163 Gene3D G3DSA:1.10.1200.10 1814 1902 7.6E-11 T 28-03-2018 AM393_RS01255 3bc76440bc87433108561e7a1fba5c85 3163 Gene3D G3DSA:3.40.366.10 550 681 1.7E-34 T 28-03-2018 AM393_RS01255 3bc76440bc87433108561e7a1fba5c85 3163 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 189 205 - T 28-03-2018 IPR018201 Beta-ketoacyl synthase, active site AM393_RS01255 3bc76440bc87433108561e7a1fba5c85 3163 SUPERFAMILY SSF51735 1384 1540 9.45E-11 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS01255 3bc76440bc87433108561e7a1fba5c85 3163 Pfam PF00698 Acyl transferase domain 551 846 1.9E-52 T 28-03-2018 IPR014043 Acyl transferase AM393_RS01255 3bc76440bc87433108561e7a1fba5c85 3163 Gene3D G3DSA:1.10.1200.10 2827 2902 7.4E-17 T 28-03-2018 AM393_RS01255 3bc76440bc87433108561e7a1fba5c85 3163 SMART SM00824 Thioesterase 2918 3152 6.1E-4 T 28-03-2018 IPR020802 Polyketide synthase, thioesterase domain GO:0009058|GO:0016788 AM393_RS01255 3bc76440bc87433108561e7a1fba5c85 3163 Gene3D G3DSA:3.40.50.150 1019 1259 1.7E-25 T 28-03-2018 AM393_RS01255 3bc76440bc87433108561e7a1fba5c85 3163 Gene3D G3DSA:3.40.50.150 2444 2761 8.5E-22 T 28-03-2018 AM393_RS01255 3bc76440bc87433108561e7a1fba5c85 3163 Gene3D G3DSA:3.40.50.720 1554 1798 1.7E-32 T 28-03-2018 AM393_RS01255 3bc76440bc87433108561e7a1fba5c85 3163 Pfam PF08242 Methyltransferase domain 1093 1194 1.2E-20 T 28-03-2018 IPR013217 Methyltransferase type 12 AM393_RS01255 3bc76440bc87433108561e7a1fba5c85 3163 Pfam PF08242 Methyltransferase domain 2593 2693 1.7E-16 T 28-03-2018 IPR013217 Methyltransferase type 12 AM393_RS01255 3bc76440bc87433108561e7a1fba5c85 3163 Gene3D G3DSA:3.40.47.10 291 450 2.7E-55 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM393_RS01255 3bc76440bc87433108561e7a1fba5c85 3163 Pfam PF00550 Phosphopantetheine attachment site 2832 2894 3.8E-13 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain AM393_RS01255 3bc76440bc87433108561e7a1fba5c85 3163 Pfam PF00550 Phosphopantetheine attachment site 1823 1889 4.1E-8 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain AM393_RS01255 3bc76440bc87433108561e7a1fba5c85 3163 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 1558 1731 5.1E-26 T 28-03-2018 AM393_RS01255 3bc76440bc87433108561e7a1fba5c85 3163 SMART SM00825 Beta-ketoacyl synthase 29 452 1.8E-182 T 28-03-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AM393_RS01255 3bc76440bc87433108561e7a1fba5c85 3163 Gene3D G3DSA:3.30.559.10 1903 2102 2.6E-21 T 28-03-2018 AM393_RS01255 3bc76440bc87433108561e7a1fba5c85 3163 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2853 2868 - T 28-03-2018 IPR006162 Phosphopantetheine attachment site AM393_RS01255 3bc76440bc87433108561e7a1fba5c85 3163 SUPERFAMILY SSF53901 427 447 1.12E-78 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM393_RS01255 3bc76440bc87433108561e7a1fba5c85 3163 SUPERFAMILY SSF53901 172 397 1.12E-78 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM393_RS01255 3bc76440bc87433108561e7a1fba5c85 3163 SUPERFAMILY SSF53901 23 143 1.12E-78 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM393_RS01255 3bc76440bc87433108561e7a1fba5c85 3163 Pfam PF00668 Condensation domain 1948 2262 9.9E-33 T 28-03-2018 IPR001242 Condensation domain AM393_RS01255 3bc76440bc87433108561e7a1fba5c85 3163 Pfam PF00975 Thioesterase domain 2915 3006 2.7E-20 T 28-03-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 AM393_RS01255 3bc76440bc87433108561e7a1fba5c85 3163 SUPERFAMILY SSF47336 2828 2894 1.44E-12 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain AM393_RS01255 3bc76440bc87433108561e7a1fba5c85 3163 SUPERFAMILY SSF52777 2098 2343 9.23E-44 T 28-03-2018 AM393_RS01255 3bc76440bc87433108561e7a1fba5c85 3163 SUPERFAMILY SSF53474 2898 3152 2.85E-44 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AM393_RS26375 d045b4f14116741d852835b0d06b6b74 410 Pfam PF07690 Major Facilitator Superfamily 19 361 5.0E-26 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS26375 d045b4f14116741d852835b0d06b6b74 410 SUPERFAMILY SSF103473 17 405 3.92E-39 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS26375 d045b4f14116741d852835b0d06b6b74 410 Gene3D G3DSA:1.20.1250.20 204 405 1.4E-11 T 28-03-2018 AM393_RS26375 d045b4f14116741d852835b0d06b6b74 410 Gene3D G3DSA:1.20.1250.20 15 203 4.4E-25 T 28-03-2018 AM393_RS18125 7d4b7f7bb5271dc4c71c5f81764e5c71 327 SUPERFAMILY SSF47413 6 64 5.23E-15 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM393_RS18125 7d4b7f7bb5271dc4c71c5f81764e5c71 327 SUPERFAMILY SSF53822 64 320 6.71E-46 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AM393_RS18125 7d4b7f7bb5271dc4c71c5f81764e5c71 327 Pfam PF00356 Bacterial regulatory proteins, lacI family 10 53 2.8E-13 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM393_RS18125 7d4b7f7bb5271dc4c71c5f81764e5c71 327 SMART SM00354 6 76 4.1E-15 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM393_RS18125 7d4b7f7bb5271dc4c71c5f81764e5c71 327 Gene3D G3DSA:3.40.50.2300 177 319 7.0E-28 T 28-03-2018 AM393_RS18125 7d4b7f7bb5271dc4c71c5f81764e5c71 327 Gene3D G3DSA:1.10.260.40 7 60 1.6E-17 T 28-03-2018 AM393_RS18125 7d4b7f7bb5271dc4c71c5f81764e5c71 327 Pfam PF13377 Periplasmic binding protein-like domain 175 325 4.8E-17 T 28-03-2018 AM393_RS18125 7d4b7f7bb5271dc4c71c5f81764e5c71 327 Gene3D G3DSA:3.40.50.2300 61 176 2.2E-22 T 28-03-2018 AM393_RS19185 42efc41c1728d304edae1ed790d14a3a 96 Gene3D G3DSA:3.30.1660.10 42 96 2.7E-14 T 28-03-2018 IPR025543 Dodecin-like AM393_RS19185 42efc41c1728d304edae1ed790d14a3a 96 SUPERFAMILY SSF159871 10 96 1.44E-19 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 AM393_RS19185 42efc41c1728d304edae1ed790d14a3a 96 Pfam PF07338 Protein of unknown function (DUF1471) 44 95 7.3E-14 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 AM393_RS06420 c0e8b19fb71343f3ae532b8786bd3667 924 Pfam PF11130 F pilus assembly Type-IV secretion system for plasmid transfer 47 310 7.6E-73 T 28-03-2018 IPR025955 Type-IV secretion system protein TraC/Conjugative transfer ATPase AM393_RS06420 c0e8b19fb71343f3ae532b8786bd3667 924 TIGRFAM TIGR03744 traC_PFL_4706: conjugative transfer ATPase, PFL_4706 family 35 921 0.0 T 28-03-2018 IPR022303 Conjugative transfer ATPase AM393_RS06420 c0e8b19fb71343f3ae532b8786bd3667 924 Gene3D G3DSA:3.40.50.300 353 919 7.5E-19 T 28-03-2018 AM393_RS06420 c0e8b19fb71343f3ae532b8786bd3667 924 SUPERFAMILY SSF52540 617 852 1.33E-34 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS06420 c0e8b19fb71343f3ae532b8786bd3667 924 SUPERFAMILY SSF52540 454 576 1.33E-34 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS03340 296907291156d9b141418091d4f028e9 1037 Gene3D G3DSA:3.30.2090.10 180 273 3.5E-19 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM393_RS03340 296907291156d9b141418091d4f028e9 1037 Gene3D G3DSA:1.20.1640.10 274 500 2.0E-43 T 28-03-2018 AM393_RS03340 296907291156d9b141418091d4f028e9 1037 Gene3D G3DSA:1.20.1640.10 822 1030 1.9E-36 T 28-03-2018 AM393_RS03340 296907291156d9b141418091d4f028e9 1037 SUPERFAMILY SSF82866 296 497 7.59E-48 T 28-03-2018 AM393_RS03340 296907291156d9b141418091d4f028e9 1037 SUPERFAMILY SSF82693 566 672 1.36E-29 T 28-03-2018 AM393_RS03340 296907291156d9b141418091d4f028e9 1037 Gene3D G3DSA:3.30.70.1430 38 141 6.5E-29 T 28-03-2018 AM393_RS03340 296907291156d9b141418091d4f028e9 1037 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 4.0E-109 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS03340 296907291156d9b141418091d4f028e9 1037 PRINTS PR00702 Acriflavin resistance protein family signature 553 570 4.0E-109 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS03340 296907291156d9b141418091d4f028e9 1037 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 4.0E-109 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS03340 296907291156d9b141418091d4f028e9 1037 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 4.0E-109 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS03340 296907291156d9b141418091d4f028e9 1037 PRINTS PR00702 Acriflavin resistance protein family signature 622 636 4.0E-109 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS03340 296907291156d9b141418091d4f028e9 1037 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 4.0E-109 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS03340 296907291156d9b141418091d4f028e9 1037 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 4.0E-109 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS03340 296907291156d9b141418091d4f028e9 1037 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 4.0E-109 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS03340 296907291156d9b141418091d4f028e9 1037 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 4.0E-109 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS03340 296907291156d9b141418091d4f028e9 1037 Pfam PF00873 AcrB/AcrD/AcrF family 1 1027 0.0 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS03340 296907291156d9b141418091d4f028e9 1037 SUPERFAMILY SSF82714 723 809 9.29E-24 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM393_RS03340 296907291156d9b141418091d4f028e9 1037 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1035 0.0 T 28-03-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 AM393_RS03340 296907291156d9b141418091d4f028e9 1037 SUPERFAMILY SSF82693 138 182 6.28E-24 T 28-03-2018 AM393_RS03340 296907291156d9b141418091d4f028e9 1037 SUPERFAMILY SSF82693 274 330 6.28E-24 T 28-03-2018 AM393_RS03340 296907291156d9b141418091d4f028e9 1037 SUPERFAMILY SSF82714 182 272 1.44E-21 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM393_RS03340 296907291156d9b141418091d4f028e9 1037 SUPERFAMILY SSF82866 807 1030 1.7E-44 T 28-03-2018 AM393_RS03340 296907291156d9b141418091d4f028e9 1037 Gene3D G3DSA:3.30.70.1440 673 769 3.0E-20 T 28-03-2018 AM393_RS03340 296907291156d9b141418091d4f028e9 1037 Gene3D G3DSA:3.30.70.1430 568 672 1.2E-24 T 28-03-2018 AM393_RS03340 296907291156d9b141418091d4f028e9 1037 SUPERFAMILY SSF82693 39 132 9.94E-27 T 28-03-2018 AM393_RS17730 f17eb19b3429ed65e08e805c2087d912 122 Pfam PF04237 YjbR 15 105 2.0E-20 T 28-03-2018 IPR007351 Uncharacterised protein YjbR AM393_RS17730 f17eb19b3429ed65e08e805c2087d912 122 SUPERFAMILY SSF142906 11 120 2.22E-36 T 28-03-2018 AM393_RS01170 ee7229a0f9488fa52a6a654e09fec312 407 SMART SM00833 266 381 2.3E-45 T 28-03-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AM393_RS01170 ee7229a0f9488fa52a6a654e09fec312 407 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 15 220 1.7E-59 T 28-03-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain AM393_RS01170 ee7229a0f9488fa52a6a654e09fec312 407 SUPERFAMILY SSF52540 11 328 1.38E-47 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS01170 ee7229a0f9488fa52a6a654e09fec312 407 Gene3D G3DSA:3.40.50.300 11 239 8.1E-54 T 28-03-2018 AM393_RS01170 ee7229a0f9488fa52a6a654e09fec312 407 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 266 381 5.7E-28 T 28-03-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AM393_RS01170 ee7229a0f9488fa52a6a654e09fec312 407 Gene3D G3DSA:3.30.1220.10 250 381 2.2E-30 T 28-03-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AM393_RS19665 be98ddf8a9af751c8a05f95b17799b98 127 ProDom PD079046 MEMBRANE INNER YBJM TRANSMEMBRANE 1 113 8.0E-32 T 28-03-2018 IPR020368 Uncharacterised protein family YbjM GO:0016021 AM393_RS19665 be98ddf8a9af751c8a05f95b17799b98 127 Pfam PF11045 Putative inner membrane protein of Enterobacteriaceae 4 115 1.7E-39 T 28-03-2018 IPR020368 Uncharacterised protein family YbjM GO:0016021 AM393_RS15975 f9229a9a2016a35b67984d0b4280f482 231 Pfam PF00005 ABC transporter 17 159 1.6E-24 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS15975 f9229a9a2016a35b67984d0b4280f482 231 ProSitePatterns PS00211 ABC transporters family signature. 132 146 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS15975 f9229a9a2016a35b67984d0b4280f482 231 SUPERFAMILY SSF52540 2 229 9.55E-53 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS15975 f9229a9a2016a35b67984d0b4280f482 231 SMART SM00382 26 210 1.0E-6 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS15975 f9229a9a2016a35b67984d0b4280f482 231 Gene3D G3DSA:3.40.50.300 1 231 6.3E-51 T 28-03-2018 AM393_RS06495 d8ec2d94c3a9b4604b750fcff67bfa61 189 Gene3D G3DSA:1.10.530.10 17 183 4.2E-13 T 28-03-2018 AM393_RS06495 d8ec2d94c3a9b4604b750fcff67bfa61 189 SUPERFAMILY SSF53955 95 171 2.3E-15 T 28-03-2018 IPR023346 Lysozyme-like domain AM393_RS06495 d8ec2d94c3a9b4604b750fcff67bfa61 189 SUPERFAMILY SSF53955 26 67 2.3E-15 T 28-03-2018 IPR023346 Lysozyme-like domain AM393_RS06495 d8ec2d94c3a9b4604b750fcff67bfa61 189 Pfam PF01464 Transglycosylase SLT domain 28 150 5.4E-5 T 28-03-2018 IPR008258 Transglycosylase SLT domain 1 AM393_RS23055 a62a401bd5c7e907faf385d496004948 535 SUPERFAMILY SSF82689 419 506 1.02E-7 T 28-03-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 AM393_RS23055 a62a401bd5c7e907faf385d496004948 535 Gene3D G3DSA:3.30.70.100 412 507 1.3E-6 T 28-03-2018 AM393_RS23055 a62a401bd5c7e907faf385d496004948 535 Gene3D G3DSA:2.30.30.60 361 410 1.8E-12 T 28-03-2018 AM393_RS23055 a62a401bd5c7e907faf385d496004948 535 SUPERFAMILY SSF50182 345 409 1.83E-12 T 28-03-2018 IPR010920 LSM domain AM393_RS23055 a62a401bd5c7e907faf385d496004948 535 Pfam PF00924 Mechanosensitive ion channel 301 502 1.3E-27 T 28-03-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AM393_RS15090 3ef05d64109fe3d33b073d9343451ebb 126 PIRSF PIRSF006246 1 125 1.9E-50 T 28-03-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 AM393_RS15090 3ef05d64109fe3d33b073d9343451ebb 126 ProDom PD009294 ASPARTATE 1-DECARBOXYLASE DECARBOXYLASE CHAIN LYASE ALPHA ALPHA- CONTAINS: PRECURSOR BETA 5 123 1.0E-60 T 28-03-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 AM393_RS15090 3ef05d64109fe3d33b073d9343451ebb 126 Gene3D G3DSA:2.40.40.20 1 117 6.7E-51 T 28-03-2018 AM393_RS15090 3ef05d64109fe3d33b073d9343451ebb 126 Pfam PF02261 Aspartate decarboxylase 1 114 1.2E-46 T 28-03-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 AM393_RS15090 3ef05d64109fe3d33b073d9343451ebb 126 SUPERFAMILY SSF50692 1 121 1.74E-46 T 28-03-2018 IPR009010 Aspartate decarboxylase-like domain AM393_RS15090 3ef05d64109fe3d33b073d9343451ebb 126 Hamap MF_00446 Aspartate 1-decarboxylase [panD]. 1 126 69.637 T 28-03-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 AM393_RS15090 3ef05d64109fe3d33b073d9343451ebb 126 TIGRFAM TIGR00223 panD: aspartate 1-decarboxylase 1 126 3.8E-65 T 28-03-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 AM393_RS08355 c8440012d2093a797005318ecbb844f0 394 Gene3D G3DSA:3.40.50.300 2 74 5.7E-11 T 28-03-2018 AM393_RS08355 c8440012d2093a797005318ecbb844f0 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 28-03-2018 IPR031157 Tr-type G domain, conserved site AM393_RS08355 c8440012d2093a797005318ecbb844f0 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 2 393 1.0E-238 T 28-03-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AM393_RS08355 c8440012d2093a797005318ecbb844f0 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 2.4E-17 T 28-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AM393_RS08355 c8440012d2093a797005318ecbb844f0 394 SUPERFAMILY SSF50447 205 301 1.61E-30 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain AM393_RS08355 c8440012d2093a797005318ecbb844f0 394 Gene3D G3DSA:2.40.30.10 300 393 2.7E-33 T 28-03-2018 AM393_RS08355 c8440012d2093a797005318ecbb844f0 394 SUPERFAMILY SSF50465 298 393 4.89E-36 T 28-03-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal AM393_RS08355 c8440012d2093a797005318ecbb844f0 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.5E-24 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM393_RS08355 c8440012d2093a797005318ecbb844f0 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.5E-24 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM393_RS08355 c8440012d2093a797005318ecbb844f0 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.5E-24 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM393_RS08355 c8440012d2093a797005318ecbb844f0 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.5E-24 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM393_RS08355 c8440012d2093a797005318ecbb844f0 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.5E-24 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM393_RS08355 c8440012d2093a797005318ecbb844f0 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 1.1E-14 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AM393_RS08355 c8440012d2093a797005318ecbb844f0 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 4.8E-58 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM393_RS08355 c8440012d2093a797005318ecbb844f0 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 61.066 T 28-03-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AM393_RS08355 c8440012d2093a797005318ecbb844f0 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 2.6E-33 T 28-03-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal AM393_RS08355 c8440012d2093a797005318ecbb844f0 394 Gene3D G3DSA:2.40.30.10 206 299 6.9E-33 T 28-03-2018 AM393_RS08355 c8440012d2093a797005318ecbb844f0 394 Gene3D G3DSA:3.40.50.300 75 203 2.7E-31 T 28-03-2018 AM393_RS08355 c8440012d2093a797005318ecbb844f0 394 SUPERFAMILY SSF52540 6 219 2.27E-60 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS09110 4346a02eaf7b0b0e8f545d4f39c50c0b 550 Gene3D G3DSA:1.50.10.10 56 550 1.9E-137 T 28-03-2018 AM393_RS09110 4346a02eaf7b0b0e8f545d4f39c50c0b 550 ProSitePatterns PS00928 Trehalase signature 2. 459 468 - T 28-03-2018 IPR018232 Glycoside hydrolase, family 37, conserved site GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 AM393_RS09110 4346a02eaf7b0b0e8f545d4f39c50c0b 550 Hamap MF_01059 Cytoplasmic trehalase [treF]. 34 549 77.558 T 28-03-2018 IPR023715 Trehalase, cytoplasmic GO:0004555|GO:0005737|GO:0005993|GO:0071474 KEGG: 00500+3.2.1.28 AM393_RS09110 4346a02eaf7b0b0e8f545d4f39c50c0b 550 PRINTS PR00744 Glycosyl hydrolase family 37 signature 452 468 1.4E-45 T 28-03-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 AM393_RS09110 4346a02eaf7b0b0e8f545d4f39c50c0b 550 PRINTS PR00744 Glycosyl hydrolase family 37 signature 389 405 1.4E-45 T 28-03-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 AM393_RS09110 4346a02eaf7b0b0e8f545d4f39c50c0b 550 PRINTS PR00744 Glycosyl hydrolase family 37 signature 346 363 1.4E-45 T 28-03-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 AM393_RS09110 4346a02eaf7b0b0e8f545d4f39c50c0b 550 PRINTS PR00744 Glycosyl hydrolase family 37 signature 281 298 1.4E-45 T 28-03-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 AM393_RS09110 4346a02eaf7b0b0e8f545d4f39c50c0b 550 PRINTS PR00744 Glycosyl hydrolase family 37 signature 314 331 1.4E-45 T 28-03-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 AM393_RS09110 4346a02eaf7b0b0e8f545d4f39c50c0b 550 PRINTS PR00744 Glycosyl hydrolase family 37 signature 530 543 1.4E-45 T 28-03-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 AM393_RS09110 4346a02eaf7b0b0e8f545d4f39c50c0b 550 PRINTS PR00744 Glycosyl hydrolase family 37 signature 207 225 1.4E-45 T 28-03-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 AM393_RS09110 4346a02eaf7b0b0e8f545d4f39c50c0b 550 SUPERFAMILY SSF48208 55 547 2.21E-150 T 28-03-2018 IPR008928 Six-hairpin glycosidase-like GO:0003824 AM393_RS09110 4346a02eaf7b0b0e8f545d4f39c50c0b 550 Pfam PF01204 Trehalase 71 546 7.4E-163 T 28-03-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 AM393_RS09110 4346a02eaf7b0b0e8f545d4f39c50c0b 550 ProSitePatterns PS00927 Trehalase signature 1. 165 178 - T 28-03-2018 IPR018232 Glycoside hydrolase, family 37, conserved site GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 AM393_RS20960 33de1169db3b289b3706435c054c247a 456 Gene3D G3DSA:1.10.275.10 1 117 3.6E-42 T 28-03-2018 IPR024083 Fumarase/histidase, N-terminal AM393_RS20960 33de1169db3b289b3706435c054c247a 456 Pfam PF08328 Adenylosuccinate lyase C-terminal 331 445 1.6E-52 T 28-03-2018 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234 AM393_RS20960 33de1169db3b289b3706435c054c247a 456 SUPERFAMILY SSF48557 10 454 1.3E-106 T 28-03-2018 IPR008948 L-Aspartase-like GO:0003824 AM393_RS20960 33de1169db3b289b3706435c054c247a 456 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 12 455 4.1E-156 T 28-03-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AM393_RS20960 33de1169db3b289b3706435c054c247a 456 Gene3D G3DSA:1.20.200.10 118 390 9.1E-85 T 28-03-2018 AM393_RS20960 33de1169db3b289b3706435c054c247a 456 Gene3D G3DSA:1.10.40.30 391 445 1.8E-31 T 28-03-2018 AM393_RS20960 33de1169db3b289b3706435c054c247a 456 Pfam PF00206 Lyase 14 312 9.2E-82 T 28-03-2018 IPR022761 Fumarate lyase, N-terminal AM393_RS20960 33de1169db3b289b3706435c054c247a 456 ProSitePatterns PS00163 Fumarate lyases signature. 294 303 - T 28-03-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 AM393_RS20960 33de1169db3b289b3706435c054c247a 456 PRINTS PR00149 Fumarate lyase superfamily signature 163 181 2.6E-17 T 28-03-2018 IPR000362 Fumarate lyase family AM393_RS20960 33de1169db3b289b3706435c054c247a 456 PRINTS PR00149 Fumarate lyase superfamily signature 294 310 2.6E-17 T 28-03-2018 IPR000362 Fumarate lyase family AM393_RS20960 33de1169db3b289b3706435c054c247a 456 PRINTS PR00149 Fumarate lyase superfamily signature 117 135 2.6E-17 T 28-03-2018 IPR000362 Fumarate lyase family AM393_RS20960 33de1169db3b289b3706435c054c247a 456 PRINTS PR00149 Fumarate lyase superfamily signature 251 278 2.6E-17 T 28-03-2018 IPR000362 Fumarate lyase family AM393_RS13405 7dbe452af77d67305ad2fd562239893f 357 Gene3D G3DSA:2.40.50.100 237 289 8.2E-7 T 28-03-2018 AM393_RS13405 7dbe452af77d67305ad2fd562239893f 357 Pfam PF08402 TOBE domain 270 342 9.2E-11 T 28-03-2018 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 AM393_RS13405 7dbe452af77d67305ad2fd562239893f 357 Gene3D G3DSA:3.40.50.300 1 234 1.7E-74 T 28-03-2018 AM393_RS13405 7dbe452af77d67305ad2fd562239893f 357 ProSitePatterns PS00211 ABC transporters family signature. 132 146 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS13405 7dbe452af77d67305ad2fd562239893f 357 SUPERFAMILY SSF50331 234 350 3.89E-22 T 28-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal AM393_RS13405 7dbe452af77d67305ad2fd562239893f 357 Gene3D G3DSA:2.40.50.100 290 350 1.3E-6 T 28-03-2018 AM393_RS13405 7dbe452af77d67305ad2fd562239893f 357 Pfam PF00005 ABC transporter 17 159 1.2E-34 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS13405 7dbe452af77d67305ad2fd562239893f 357 SUPERFAMILY SSF52540 1 240 1.52E-84 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS13405 7dbe452af77d67305ad2fd562239893f 357 SMART SM00382 26 209 6.5E-15 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS04750 6f2a31a445e5806c8b8d1b4d9340d7fb 853 Pfam PF05192 MutS domain III 272 559 4.8E-39 T 28-03-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 AM393_RS04750 6f2a31a445e5806c8b8d1b4d9340d7fb 853 Gene3D G3DSA:3.40.1170.10 2 134 3.9E-48 T 28-03-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 AM393_RS04750 6f2a31a445e5806c8b8d1b4d9340d7fb 853 Pfam PF01624 MutS domain I 11 122 2.5E-43 T 28-03-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 AM393_RS04750 6f2a31a445e5806c8b8d1b4d9340d7fb 853 SUPERFAMILY SSF52540 567 798 4.68E-61 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS04750 6f2a31a445e5806c8b8d1b4d9340d7fb 853 Pfam PF00488 MutS domain V 610 797 3.1E-88 T 28-03-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 AM393_RS04750 6f2a31a445e5806c8b8d1b4d9340d7fb 853 Gene3D G3DSA:1.10.1420.10 266 407 4.3E-37 T 28-03-2018 AM393_RS04750 6f2a31a445e5806c8b8d1b4d9340d7fb 853 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 688 704 - T 28-03-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 AM393_RS04750 6f2a31a445e5806c8b8d1b4d9340d7fb 853 Pfam PF05188 MutS domain II 131 256 4.7E-34 T 28-03-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 AM393_RS04750 6f2a31a445e5806c8b8d1b4d9340d7fb 853 SUPERFAMILY SSF53150 117 269 7.72E-43 T 28-03-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 AM393_RS04750 6f2a31a445e5806c8b8d1b4d9340d7fb 853 PIRSF PIRSF037677 210 833 1.6E-126 T 28-03-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 AM393_RS04750 6f2a31a445e5806c8b8d1b4d9340d7fb 853 PIRSF PIRSF037677 4 192 3.6E-29 T 28-03-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 AM393_RS04750 6f2a31a445e5806c8b8d1b4d9340d7fb 853 SUPERFAMILY SSF55271 5 116 1.18E-43 T 28-03-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 AM393_RS04750 6f2a31a445e5806c8b8d1b4d9340d7fb 853 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 10 850 0.0 T 28-03-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 AM393_RS04750 6f2a31a445e5806c8b8d1b4d9340d7fb 853 SUPERFAMILY SSF48334 270 566 7.19E-90 T 28-03-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 AM393_RS04750 6f2a31a445e5806c8b8d1b4d9340d7fb 853 SMART SM00534 607 794 2.5E-123 T 28-03-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 AM393_RS04750 6f2a31a445e5806c8b8d1b4d9340d7fb 853 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 10 845 25.477 T 28-03-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 AM393_RS04750 6f2a31a445e5806c8b8d1b4d9340d7fb 853 Gene3D G3DSA:3.40.50.300 567 825 4.6E-42 T 28-03-2018 AM393_RS04750 6f2a31a445e5806c8b8d1b4d9340d7fb 853 Gene3D G3DSA:3.30.420.110 135 265 1.5E-27 T 28-03-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 AM393_RS04750 6f2a31a445e5806c8b8d1b4d9340d7fb 853 SMART SM00533 286 591 1.2E-108 T 28-03-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 AM393_RS04750 6f2a31a445e5806c8b8d1b4d9340d7fb 853 Pfam PF05190 MutS family domain IV 428 517 2.6E-28 T 28-03-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 AM393_RS04750 6f2a31a445e5806c8b8d1b4d9340d7fb 853 Gene3D G3DSA:1.10.1420.10 408 535 6.3E-31 T 28-03-2018 AM393_RS10950 a9beec258f47c8137f45aa930098756b 167 Pfam PF07813 LTXXQ motif family protein 40 136 7.1E-22 T 28-03-2018 IPR012899 LTXXQ motif family protein GO:0042597 AM393_RS10950 a9beec258f47c8137f45aa930098756b 167 PIRSF PIRSF034445 2 146 6.5E-31 T 28-03-2018 IPR012899 LTXXQ motif family protein GO:0042597 AM393_RS19720 8a441ec29bf97c5984ae86d7f13f5fe2 375 SUPERFAMILY SSF53335 3 373 2.47E-54 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM393_RS19720 8a441ec29bf97c5984ae86d7f13f5fe2 375 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 207 373 1.1E-16 T 28-03-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 AM393_RS19720 8a441ec29bf97c5984ae86d7f13f5fe2 375 Gene3D G3DSA:3.40.50.150 1 372 1.1E-44 T 28-03-2018 AM393_RS19720 8a441ec29bf97c5984ae86d7f13f5fe2 375 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 306 337 - T 28-03-2018 IPR030390 RNA methyltransferase TrmA, active site AM393_RS19720 8a441ec29bf97c5984ae86d7f13f5fe2 375 TIGRFAM TIGR02085 meth_trns_rumB: 23S rRNA (uracil-5-)-methyltransferase RumB 2 373 2.6E-204 T 28-03-2018 IPR011825 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC GO:0016070|GO:0016436 AM393_RS19720 8a441ec29bf97c5984ae86d7f13f5fe2 375 Hamap MF_01012 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC [rlmC]. 1 374 78.377 T 28-03-2018 IPR011825 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC GO:0016070|GO:0016436 AM393_RS19720 8a441ec29bf97c5984ae86d7f13f5fe2 375 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 356 366 - T 28-03-2018 IPR030391 RNA methyltransferase TrmA, conserved site AM393_RS01130 884425e9e3afe24bf40afa08baa99c71 311 Pfam PF02649 Type I GTP cyclohydrolase folE2 14 300 9.6E-68 T 28-03-2018 IPR003801 GTP cyclohydrolase FolE2/MptA GO:0003933 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852 AM393_RS01130 884425e9e3afe24bf40afa08baa99c71 311 Hamap MF_01527_B GTP cyclohydrolase FolE2 [folE2]. 14 305 32.236 T 28-03-2018 IPR022838 GTP cyclohydrolase FolE2 GO:0003934|GO:0035998 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852 AM393_RS01130 884425e9e3afe24bf40afa08baa99c71 311 Gene3D G3DSA:3.10.270.10 13 303 7.5E-77 T 28-03-2018 AM393_RS07545 e7c22a6dff91d4da316563eef5f02d3b 282 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 17 32 - T 28-03-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM393_RS07545 e7c22a6dff91d4da316563eef5f02d3b 282 Gene3D G3DSA:3.20.20.20 2 282 4.3E-111 T 28-03-2018 AM393_RS07545 e7c22a6dff91d4da316563eef5f02d3b 282 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 17 271 2.1E-104 T 28-03-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 AM393_RS07545 e7c22a6dff91d4da316563eef5f02d3b 282 Pfam PF00809 Pterin binding enzyme 18 257 2.1E-91 T 28-03-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM393_RS07545 e7c22a6dff91d4da316563eef5f02d3b 282 SUPERFAMILY SSF51717 7 273 1.03E-105 T 28-03-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM393_RS07545 e7c22a6dff91d4da316563eef5f02d3b 282 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 51 64 - T 28-03-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM393_RS24450 4fdec9606553cc8db7e8f57cca5474c2 346 Gene3D G3DSA:1.10.260.40 6 63 8.0E-14 T 28-03-2018 AM393_RS24450 4fdec9606553cc8db7e8f57cca5474c2 346 Pfam PF13407 Periplasmic binding protein domain 115 324 2.8E-20 T 28-03-2018 IPR025997 Periplasmic binding protein AM393_RS24450 4fdec9606553cc8db7e8f57cca5474c2 346 ProSitePatterns PS00356 LacI-type HTH domain signature. 10 28 - T 28-03-2018 AM393_RS24450 4fdec9606553cc8db7e8f57cca5474c2 346 SUPERFAMILY SSF53822 68 342 5.18E-28 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AM393_RS24450 4fdec9606553cc8db7e8f57cca5474c2 346 SUPERFAMILY SSF47413 7 63 2.95E-11 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM393_RS24450 4fdec9606553cc8db7e8f57cca5474c2 346 Gene3D G3DSA:3.40.50.2300 64 187 2.3E-10 T 28-03-2018 AM393_RS24450 4fdec9606553cc8db7e8f57cca5474c2 346 SMART SM00354 7 80 7.8E-7 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM393_RS24450 4fdec9606553cc8db7e8f57cca5474c2 346 Gene3D G3DSA:3.40.50.2300 188 323 2.8E-17 T 28-03-2018 AM393_RS24450 4fdec9606553cc8db7e8f57cca5474c2 346 Pfam PF00356 Bacterial regulatory proteins, lacI family 9 52 3.2E-11 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM393_RS06855 70ef25316f74fe29d3888fdd3998de14 206 Gene3D G3DSA:1.20.5.50 90 170 2.6E-6 T 28-03-2018 AM393_RS06855 70ef25316f74fe29d3888fdd3998de14 206 Pfam PF08239 Bacterial SH3 domain 35 85 6.9E-10 T 28-03-2018 IPR003646 SH3-like domain, bacterial-type AM393_RS06855 70ef25316f74fe29d3888fdd3998de14 206 SMART SM00287 23 89 1.8E-14 T 28-03-2018 IPR003646 SH3-like domain, bacterial-type AM393_RS06855 70ef25316f74fe29d3888fdd3998de14 206 PIRSF PIRSF006158 1 205 1.9E-70 T 28-03-2018 IPR016476 SH3 domain protein AM393_RS06855 70ef25316f74fe29d3888fdd3998de14 206 TIGRFAM TIGR04211 SH3_and_anchor: SH3 domain protein 27 204 4.2E-53 T 28-03-2018 IPR016476 SH3 domain protein AM393_RS06855 70ef25316f74fe29d3888fdd3998de14 206 Gene3D G3DSA:2.30.30.410 13 89 1.0E-11 T 28-03-2018 AM393_RS09165 ad8512905fb97f4b9856aa5e78588883 676 SUPERFAMILY SSF55073 257 408 2.28E-15 T 28-03-2018 IPR029787 Nucleotide cyclase AM393_RS09165 ad8512905fb97f4b9856aa5e78588883 676 SMART SM00267 239 406 1.1E-20 T 28-03-2018 IPR000160 GGDEF domain AM393_RS09165 ad8512905fb97f4b9856aa5e78588883 676 Gene3D G3DSA:3.30.70.270 247 413 1.3E-21 T 28-03-2018 AM393_RS09165 ad8512905fb97f4b9856aa5e78588883 676 Pfam PF00563 EAL domain 423 654 9.7E-56 T 28-03-2018 IPR001633 EAL domain AM393_RS09165 ad8512905fb97f4b9856aa5e78588883 676 Pfam PF17154 Gammaproteobacterial periplasmic sensor domain 44 162 1.9E-50 T 28-03-2018 IPR033419 Gammaproteobacterial periplasmic sensor domain GAPES3 AM393_RS09165 ad8512905fb97f4b9856aa5e78588883 676 SMART SM00052 416 661 8.7E-94 T 28-03-2018 IPR001633 EAL domain AM393_RS09165 ad8512905fb97f4b9856aa5e78588883 676 SMART SM00304 188 244 0.0035 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM393_RS09165 ad8512905fb97f4b9856aa5e78588883 676 Pfam PF00672 HAMP domain 188 241 7.6E-8 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM393_RS09165 ad8512905fb97f4b9856aa5e78588883 676 Gene3D G3DSA:3.20.20.450 414 665 6.7E-78 T 28-03-2018 IPR001633 EAL domain AM393_RS09165 ad8512905fb97f4b9856aa5e78588883 676 Pfam PF00990 Diguanylate cyclase, GGDEF domain 255 402 9.2E-8 T 28-03-2018 IPR000160 GGDEF domain AM393_RS09165 ad8512905fb97f4b9856aa5e78588883 676 SUPERFAMILY SSF141868 421 668 2.09E-68 T 28-03-2018 IPR001633 EAL domain AM393_RS03850 624e878a5962d204e91e568cd07edd4e 141 TIGRFAM TIGR01068 thioredoxin: thioredoxin 46 137 2.7E-35 T 28-03-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 AM393_RS03850 624e878a5962d204e91e568cd07edd4e 141 ProSitePatterns PS00194 Thioredoxin family active site. 56 74 - T 28-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AM393_RS03850 624e878a5962d204e91e568cd07edd4e 141 Gene3D G3DSA:3.40.30.10 32 141 4.1E-33 T 28-03-2018 AM393_RS03850 624e878a5962d204e91e568cd07edd4e 141 PIRSF PIRSF000077 36 138 1.5E-31 T 28-03-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 AM393_RS03850 624e878a5962d204e91e568cd07edd4e 141 SUPERFAMILY SSF52833 25 138 4.05E-37 T 28-03-2018 IPR012336 Thioredoxin-like fold AM393_RS03850 624e878a5962d204e91e568cd07edd4e 141 PRINTS PR00421 Thioredoxin family signature 63 72 7.5E-9 T 28-03-2018 AM393_RS03850 624e878a5962d204e91e568cd07edd4e 141 PRINTS PR00421 Thioredoxin family signature 55 63 7.5E-9 T 28-03-2018 AM393_RS03850 624e878a5962d204e91e568cd07edd4e 141 PRINTS PR00421 Thioredoxin family signature 103 114 7.5E-9 T 28-03-2018 AM393_RS03850 624e878a5962d204e91e568cd07edd4e 141 Pfam PF00085 Thioredoxin 38 137 6.8E-27 T 28-03-2018 IPR013766 Thioredoxin domain GO:0045454 AM393_RS23315 b1354a62e6a889b5c8bce3c2ba906b47 211 SUPERFAMILY SSF46894 137 198 1.33E-12 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM393_RS23315 b1354a62e6a889b5c8bce3c2ba906b47 211 Gene3D G3DSA:1.10.10.10 52 208 1.4E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS23315 b1354a62e6a889b5c8bce3c2ba906b47 211 Pfam PF00196 Bacterial regulatory proteins, luxR family 144 198 1.4E-12 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS23315 b1354a62e6a889b5c8bce3c2ba906b47 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 159 175 1.4E-8 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS23315 b1354a62e6a889b5c8bce3c2ba906b47 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 175 187 1.4E-8 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS23315 b1354a62e6a889b5c8bce3c2ba906b47 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 145 159 1.4E-8 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS23315 b1354a62e6a889b5c8bce3c2ba906b47 211 SMART SM00421 142 199 5.8E-8 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS23315 b1354a62e6a889b5c8bce3c2ba906b47 211 ProSitePatterns PS00622 LuxR-type HTH domain signature. 159 186 - T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS09100 c6bd73dd6ea0c58de52ca8db4cc41262 207 Gene3D G3DSA:1.20.1050.10 98 202 4.3E-23 T 28-03-2018 AM393_RS09100 c6bd73dd6ea0c58de52ca8db4cc41262 207 Pfam PF02798 Glutathione S-transferase, N-terminal domain 2 75 5.3E-15 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AM393_RS09100 c6bd73dd6ea0c58de52ca8db4cc41262 207 SUPERFAMILY SSF47616 72 200 1.39E-25 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like AM393_RS09100 c6bd73dd6ea0c58de52ca8db4cc41262 207 SUPERFAMILY SSF52833 1 84 8.7E-22 T 28-03-2018 IPR012336 Thioredoxin-like fold AM393_RS09100 c6bd73dd6ea0c58de52ca8db4cc41262 207 Gene3D G3DSA:3.40.30.10 1 97 8.9E-28 T 28-03-2018 AM393_RS09100 c6bd73dd6ea0c58de52ca8db4cc41262 207 Pfam PF00043 Glutathione S-transferase, C-terminal domain 139 196 4.8E-5 T 28-03-2018 IPR004046 Glutathione S-transferase, C-terminal AM393_RS22420 10eff00e17c90ec28f90cf06f77cb4a8 197 Pfam PF00440 Bacterial regulatory proteins, tetR family 22 65 3.4E-10 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM393_RS22420 10eff00e17c90ec28f90cf06f77cb4a8 197 Gene3D G3DSA:1.10.10.60 6 67 5.7E-18 T 28-03-2018 AM393_RS22420 10eff00e17c90ec28f90cf06f77cb4a8 197 SUPERFAMILY SSF48498 88 188 5.78E-9 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AM393_RS22420 10eff00e17c90ec28f90cf06f77cb4a8 197 SUPERFAMILY SSF46689 8 89 1.16E-13 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS22420 10eff00e17c90ec28f90cf06f77cb4a8 197 ProSitePatterns PS01081 TetR-type HTH domain signature. 33 63 - T 28-03-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AM393_RS22420 10eff00e17c90ec28f90cf06f77cb4a8 197 Gene3D G3DSA:1.10.357.10 68 192 2.3E-9 T 28-03-2018 AM393_RS14410 afc4cbb24b50cfa600b10046d1b63f0c 377 Pfam PF00684 DnaJ central domain 145 205 1.0E-15 T 28-03-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 AM393_RS14410 afc4cbb24b50cfa600b10046d1b63f0c 377 Gene3D G3DSA:2.60.260.20 253 363 5.2E-27 T 28-03-2018 AM393_RS14410 afc4cbb24b50cfa600b10046d1b63f0c 377 Gene3D G3DSA:2.10.230.10 142 201 3.7E-21 T 28-03-2018 AM393_RS14410 afc4cbb24b50cfa600b10046d1b63f0c 377 Gene3D G3DSA:1.10.287.110 1 116 7.8E-38 T 28-03-2018 IPR001623 DnaJ domain AM393_RS14410 afc4cbb24b50cfa600b10046d1b63f0c 377 SMART SM00271 4 62 5.0E-31 T 28-03-2018 IPR001623 DnaJ domain AM393_RS14410 afc4cbb24b50cfa600b10046d1b63f0c 377 SUPERFAMILY SSF57938 132 209 9.55E-24 T 28-03-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 AM393_RS14410 afc4cbb24b50cfa600b10046d1b63f0c 377 Gene3D G3DSA:2.60.260.20 202 252 6.1E-12 T 28-03-2018 AM393_RS14410 afc4cbb24b50cfa600b10046d1b63f0c 377 Pfam PF01556 DnaJ C terminal domain 119 331 4.6E-46 T 28-03-2018 IPR002939 Chaperone DnaJ, C-terminal AM393_RS14410 afc4cbb24b50cfa600b10046d1b63f0c 377 SUPERFAMILY SSF46565 1 107 2.88E-36 T 28-03-2018 IPR001623 DnaJ domain AM393_RS14410 afc4cbb24b50cfa600b10046d1b63f0c 377 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 348 3.7E-143 T 28-03-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 AM393_RS14410 afc4cbb24b50cfa600b10046d1b63f0c 377 PRINTS PR00625 DnaJ domain signature 7 25 1.4E-33 T 28-03-2018 IPR001623 DnaJ domain AM393_RS14410 afc4cbb24b50cfa600b10046d1b63f0c 377 PRINTS PR00625 DnaJ domain signature 42 62 1.4E-33 T 28-03-2018 IPR001623 DnaJ domain AM393_RS14410 afc4cbb24b50cfa600b10046d1b63f0c 377 PRINTS PR00625 DnaJ domain signature 62 81 1.4E-33 T 28-03-2018 IPR001623 DnaJ domain AM393_RS14410 afc4cbb24b50cfa600b10046d1b63f0c 377 PRINTS PR00625 DnaJ domain signature 25 40 1.4E-33 T 28-03-2018 IPR001623 DnaJ domain AM393_RS14410 afc4cbb24b50cfa600b10046d1b63f0c 377 Pfam PF00226 DnaJ domain 5 67 1.2E-28 T 28-03-2018 IPR001623 DnaJ domain AM393_RS14410 afc4cbb24b50cfa600b10046d1b63f0c 377 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 28-03-2018 IPR018253 DnaJ domain, conserved site AM393_RS14410 afc4cbb24b50cfa600b10046d1b63f0c 377 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 371 42.822 T 28-03-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 AM393_RS14410 afc4cbb24b50cfa600b10046d1b63f0c 377 SUPERFAMILY SSF49493 257 342 3.53E-21 T 28-03-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 AM393_RS14410 afc4cbb24b50cfa600b10046d1b63f0c 377 SUPERFAMILY SSF49493 112 167 1.29E-20 T 28-03-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 AM393_RS14410 afc4cbb24b50cfa600b10046d1b63f0c 377 SUPERFAMILY SSF49493 211 260 1.29E-20 T 28-03-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 AM393_RS04890 45cbef42f835d402fbca9f120dfcaaa0 369 SUPERFAMILY SSF51735 325 354 1.0E-30 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS04890 45cbef42f835d402fbca9f120dfcaaa0 369 SUPERFAMILY SSF51735 1 292 1.0E-30 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS04890 45cbef42f835d402fbca9f120dfcaaa0 369 Pfam PF07993 Male sterility protein 6 237 2.9E-37 T 28-03-2018 IPR013120 Male sterility, NAD-binding Reactome: R-HSA-8848584 AM393_RS04890 45cbef42f835d402fbca9f120dfcaaa0 369 Gene3D G3DSA:3.40.50.720 2 358 8.0E-32 T 28-03-2018 AM393_RS27690 666a93917fe44a94f92e630826536979 182 Pfam PF13098 Thioredoxin-like domain 53 180 2.6E-15 T 28-03-2018 IPR012336 Thioredoxin-like fold AM393_RS27690 666a93917fe44a94f92e630826536979 182 SUPERFAMILY SSF52833 49 181 2.4E-17 T 28-03-2018 IPR012336 Thioredoxin-like fold AM393_RS27690 666a93917fe44a94f92e630826536979 182 Gene3D G3DSA:3.40.30.10 44 182 2.6E-10 T 28-03-2018 AM393_RS01885 d4b67f412987d1faf0820dbad17a6a86 1040 SUPERFAMILY SSF82693 565 660 5.58E-17 T 28-03-2018 AM393_RS01885 d4b67f412987d1faf0820dbad17a6a86 1040 SUPERFAMILY SSF82693 49 138 5.23E-23 T 28-03-2018 AM393_RS01885 d4b67f412987d1faf0820dbad17a6a86 1040 SUPERFAMILY SSF82714 192 275 6.54E-17 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM393_RS01885 d4b67f412987d1faf0820dbad17a6a86 1040 SUPERFAMILY SSF82866 299 498 1.57E-45 T 28-03-2018 AM393_RS01885 d4b67f412987d1faf0820dbad17a6a86 1040 Gene3D G3DSA:1.20.1640.10 823 1025 9.8E-37 T 28-03-2018 AM393_RS01885 d4b67f412987d1faf0820dbad17a6a86 1040 Gene3D G3DSA:1.20.1640.10 277 501 2.9E-44 T 28-03-2018 AM393_RS01885 d4b67f412987d1faf0820dbad17a6a86 1040 Gene3D G3DSA:3.30.2090.10 717 802 1.8E-19 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM393_RS01885 d4b67f412987d1faf0820dbad17a6a86 1040 SUPERFAMILY SSF82693 146 191 5.55E-22 T 28-03-2018 AM393_RS01885 d4b67f412987d1faf0820dbad17a6a86 1040 SUPERFAMILY SSF82693 277 333 5.55E-22 T 28-03-2018 AM393_RS01885 d4b67f412987d1faf0820dbad17a6a86 1040 Pfam PF00873 AcrB/AcrD/AcrF family 13 1022 0.0 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS01885 d4b67f412987d1faf0820dbad17a6a86 1040 PRINTS PR00702 Acriflavin resistance protein family signature 47 65 9.2E-80 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS01885 d4b67f412987d1faf0820dbad17a6a86 1040 PRINTS PR00702 Acriflavin resistance protein family signature 447 470 9.2E-80 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS01885 d4b67f412987d1faf0820dbad17a6a86 1040 PRINTS PR00702 Acriflavin resistance protein family signature 366 387 9.2E-80 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS01885 d4b67f412987d1faf0820dbad17a6a86 1040 PRINTS PR00702 Acriflavin resistance protein family signature 394 418 9.2E-80 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS01885 d4b67f412987d1faf0820dbad17a6a86 1040 PRINTS PR00702 Acriflavin resistance protein family signature 619 633 9.2E-80 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS01885 d4b67f412987d1faf0820dbad17a6a86 1040 PRINTS PR00702 Acriflavin resistance protein family signature 339 362 9.2E-80 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS01885 d4b67f412987d1faf0820dbad17a6a86 1040 PRINTS PR00702 Acriflavin resistance protein family signature 472 495 9.2E-80 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS01885 d4b67f412987d1faf0820dbad17a6a86 1040 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 9.2E-80 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS01885 d4b67f412987d1faf0820dbad17a6a86 1040 PRINTS PR00702 Acriflavin resistance protein family signature 19 43 9.2E-80 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS01885 d4b67f412987d1faf0820dbad17a6a86 1040 SUPERFAMILY SSF82714 719 800 2.35E-17 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM393_RS01885 d4b67f412987d1faf0820dbad17a6a86 1040 Gene3D G3DSA:3.30.70.1430 49 151 7.4E-24 T 28-03-2018 AM393_RS01885 d4b67f412987d1faf0820dbad17a6a86 1040 Gene3D G3DSA:3.30.70.1430 567 666 4.9E-15 T 28-03-2018 AM393_RS01885 d4b67f412987d1faf0820dbad17a6a86 1040 SUPERFAMILY SSF82866 802 1025 2.49E-46 T 28-03-2018 AM393_RS01885 d4b67f412987d1faf0820dbad17a6a86 1040 Hamap MF_01423 Multidrug resistance protein MdtB [mdtB]. 1 1040 33.617 T 28-03-2018 IPR022831 Multidrug resistance protein MdtB AM393_RS01885 d4b67f412987d1faf0820dbad17a6a86 1040 Gene3D G3DSA:3.30.2090.10 190 276 4.6E-17 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM393_RS08225 d8363c37241cb491bf04a2a6af17ffc1 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 370 388 2.0E-98 T 28-03-2018 AM393_RS08225 d8363c37241cb491bf04a2a6af17ffc1 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 180 203 2.0E-98 T 28-03-2018 AM393_RS08225 d8363c37241cb491bf04a2a6af17ffc1 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 272 291 2.0E-98 T 28-03-2018 AM393_RS08225 d8363c37241cb491bf04a2a6af17ffc1 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 315 337 2.0E-98 T 28-03-2018 AM393_RS08225 d8363c37241cb491bf04a2a6af17ffc1 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 402 420 2.0E-98 T 28-03-2018 AM393_RS08225 d8363c37241cb491bf04a2a6af17ffc1 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 154 179 2.0E-98 T 28-03-2018 AM393_RS08225 d8363c37241cb491bf04a2a6af17ffc1 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 23 41 2.0E-98 T 28-03-2018 AM393_RS08225 d8363c37241cb491bf04a2a6af17ffc1 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 75 95 2.0E-98 T 28-03-2018 AM393_RS08225 d8363c37241cb491bf04a2a6af17ffc1 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 116 139 2.0E-98 T 28-03-2018 AM393_RS08225 d8363c37241cb491bf04a2a6af17ffc1 443 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 20 429 6.3E-141 T 28-03-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AM393_RS08225 d8363c37241cb491bf04a2a6af17ffc1 443 Hamap MF_01465 Protein translocase subunit SecY [secY]. 10 433 29.881 T 28-03-2018 IPR026593 Protein translocase subunit SecY AM393_RS08225 d8363c37241cb491bf04a2a6af17ffc1 443 ProSitePatterns PS00755 Protein secY signature 1. 76 95 - T 28-03-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AM393_RS08225 d8363c37241cb491bf04a2a6af17ffc1 443 Pfam PF00344 SecY translocase 76 417 4.9E-119 T 28-03-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AM393_RS08225 d8363c37241cb491bf04a2a6af17ffc1 443 SUPERFAMILY SSF103491 16 424 1.44E-133 T 28-03-2018 IPR023201 SecY subunit domain Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AM393_RS08225 d8363c37241cb491bf04a2a6af17ffc1 443 Gene3D G3DSA:1.10.3370.10 12 439 6.8E-160 T 28-03-2018 AM393_RS08225 d8363c37241cb491bf04a2a6af17ffc1 443 PIRSF PIRSF004557 11 441 3.0E-123 T 28-03-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AM393_RS08225 d8363c37241cb491bf04a2a6af17ffc1 443 ProSitePatterns PS00756 Protein secY signature 2. 173 190 - T 28-03-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AM393_RS01680 71a2b825fc7a62b441e33efea027ba56 199 Gene3D G3DSA:1.10.287.1080 108 199 1.8E-20 T 28-03-2018 AM393_RS01680 71a2b825fc7a62b441e33efea027ba56 199 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 4 199 37.979 T 28-03-2018 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19 AM393_RS01680 71a2b825fc7a62b441e33efea027ba56 199 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 111 194 4.6E-30 T 28-03-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 AM393_RS01680 71a2b825fc7a62b441e33efea027ba56 199 SUPERFAMILY SSF101386 111 198 4.8E-24 T 28-03-2018 AM393_RS01680 71a2b825fc7a62b441e33efea027ba56 199 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 52 101 4.0E-24 T 28-03-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 AM393_RS01680 71a2b825fc7a62b441e33efea027ba56 199 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 112 197 1.3E-17 T 28-03-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 AM393_RS01680 71a2b825fc7a62b441e33efea027ba56 199 SUPERFAMILY SSF141734 4 117 6.15E-47 T 28-03-2018 AM393_RS01680 71a2b825fc7a62b441e33efea027ba56 199 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 29 101 5.8E-32 T 28-03-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 AM393_RS01680 71a2b825fc7a62b441e33efea027ba56 199 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 108 194 18.413 T 28-03-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 AM393_RS09545 7f5e4c29cef0dc38f7421161cca976cc 551 Pfam PF02652 L-lactate permease 16 542 8.3E-229 T 28-03-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 AM393_RS09545 7f5e4c29cef0dc38f7421161cca976cc 551 TIGRFAM TIGR00795 lctP: transporter, lactate permease (LctP) family 6 544 2.4E-236 T 28-03-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 AM393_RS00820 53474227735a2e3fd3376b5a2e50190e 473 SUPERFAMILY SSF103473 17 202 1.7E-58 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS00820 53474227735a2e3fd3376b5a2e50190e 473 SUPERFAMILY SSF103473 250 460 1.7E-58 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS00820 53474227735a2e3fd3376b5a2e50190e 473 Pfam PF07690 Major Facilitator Superfamily 21 411 1.7E-44 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS00820 53474227735a2e3fd3376b5a2e50190e 473 Gene3D G3DSA:1.20.1250.20 11 204 4.1E-31 T 28-03-2018 AM393_RS00820 53474227735a2e3fd3376b5a2e50190e 473 Gene3D G3DSA:1.20.1250.20 261 473 4.0E-19 T 28-03-2018 AM393_RS00820 53474227735a2e3fd3376b5a2e50190e 473 PRINTS PR01036 Tetracycline resistance protein TetB signature 140 164 7.4E-5 T 28-03-2018 AM393_RS00820 53474227735a2e3fd3376b5a2e50190e 473 PRINTS PR01036 Tetracycline resistance protein TetB signature 400 419 7.4E-5 T 28-03-2018 AM393_RS00820 53474227735a2e3fd3376b5a2e50190e 473 PRINTS PR01036 Tetracycline resistance protein TetB signature 19 43 7.4E-5 T 28-03-2018 AM393_RS00820 53474227735a2e3fd3376b5a2e50190e 473 PRINTS PR01036 Tetracycline resistance protein TetB signature 110 130 7.4E-5 T 28-03-2018 AM393_RS12395 ad7bcd41b1918b8e6965bafceee194ab 187 TIGRFAM TIGR02322 phosphon_PhnN: phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN 3 177 8.3E-67 T 28-03-2018 IPR012699 Ribose 1,5-bisphosphate phosphokinase PhnN GO:0006015|GO:0033863 KEGG: 00030+2.7.4.23|MetaCyc: PWY-7805|MetaCyc: PWY-7807 AM393_RS12395 ad7bcd41b1918b8e6965bafceee194ab 187 Gene3D G3DSA:3.40.50.300 4 186 3.2E-23 T 28-03-2018 AM393_RS12395 ad7bcd41b1918b8e6965bafceee194ab 187 Pfam PF13238 AAA domain 6 137 7.7E-7 T 28-03-2018 AM393_RS12395 ad7bcd41b1918b8e6965bafceee194ab 187 SUPERFAMILY SSF52540 3 179 2.34E-31 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS12395 ad7bcd41b1918b8e6965bafceee194ab 187 SMART SM00072 2 179 1.7E-23 T 28-03-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit AM393_RS12395 ad7bcd41b1918b8e6965bafceee194ab 187 Hamap MF_00836 Ribose 1,5-bisphosphate phosphokinase PhnN [phnN]. 2 176 32.967 T 28-03-2018 IPR012699 Ribose 1,5-bisphosphate phosphokinase PhnN GO:0006015|GO:0033863 KEGG: 00030+2.7.4.23|MetaCyc: PWY-7805|MetaCyc: PWY-7807 AM393_RS23210 d8837df7df871810160766f3956df5cd 406 Gene3D G3DSA:1.10.10.10 11 82 3.7E-8 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS23210 d8837df7df871810160766f3956df5cd 406 Gene3D G3DSA:3.30.420.40 227 374 1.0E-27 T 28-03-2018 AM393_RS23210 d8837df7df871810160766f3956df5cd 406 SUPERFAMILY SSF53067 86 394 7.02E-44 T 28-03-2018 AM393_RS23210 d8837df7df871810160766f3956df5cd 406 Gene3D G3DSA:3.30.420.40 83 226 7.1E-28 T 28-03-2018 AM393_RS23210 d8837df7df871810160766f3956df5cd 406 SUPERFAMILY SSF46785 12 77 5.52E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS23210 d8837df7df871810160766f3956df5cd 406 Pfam PF00480 ROK family 87 389 5.4E-51 T 28-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 AM393_RS14955 c1386e35de4d9540cc730ae608bfcd52 468 Gene3D G3DSA:1.20.1250.20 213 467 9.3E-19 T 28-03-2018 AM393_RS14955 c1386e35de4d9540cc730ae608bfcd52 468 SUPERFAMILY SSF103473 13 415 2.35E-41 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS14955 c1386e35de4d9540cc730ae608bfcd52 468 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 11 446 6.3E-125 T 28-03-2018 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 AM393_RS14955 c1386e35de4d9540cc730ae608bfcd52 468 Pfam PF13347 MFS/sugar transport protein 13 432 1.2E-104 T 28-03-2018 AM393_RS14955 c1386e35de4d9540cc730ae608bfcd52 468 Gene3D G3DSA:1.20.1250.20 12 212 4.2E-19 T 28-03-2018 AM393_RS08385 5f99506775f90ad5432ded4760d3fc28 128 Hamap MF_00390 Sulfurtransferase TusD [tusD]. 1 128 39.106 T 28-03-2018 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 AM393_RS08385 5f99506775f90ad5432ded4760d3fc28 128 Pfam PF02635 DsrE/DsrF-like family 1 128 1.6E-27 T 28-03-2018 IPR003787 Sulphur relay, DsrE/F-like protein AM393_RS08385 5f99506775f90ad5432ded4760d3fc28 128 SUPERFAMILY SSF75169 1 128 2.02E-36 T 28-03-2018 IPR027396 DsrEFH-like AM393_RS08385 5f99506775f90ad5432ded4760d3fc28 128 TIGRFAM TIGR03012 sulf_tusD_dsrE: sulfur relay protein TusD/DsrE 2 128 6.5E-54 T 28-03-2018 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 AM393_RS08385 5f99506775f90ad5432ded4760d3fc28 128 Gene3D G3DSA:3.40.1260.10 1 128 4.7E-30 T 28-03-2018 AM393_RS12030 d3a2bd24402a317b75c76d7fb033ed51 369 SMART SM00382 28 211 6.9E-13 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS12030 d3a2bd24402a317b75c76d7fb033ed51 369 Gene3D G3DSA:2.40.50.100 252 293 1.4E-11 T 28-03-2018 AM393_RS12030 d3a2bd24402a317b75c76d7fb033ed51 369 Gene3D G3DSA:2.40.50.140 294 346 8.8E-10 T 28-03-2018 AM393_RS12030 d3a2bd24402a317b75c76d7fb033ed51 369 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS12030 d3a2bd24402a317b75c76d7fb033ed51 369 SUPERFAMILY SSF50331 236 364 8.99E-32 T 28-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal AM393_RS12030 d3a2bd24402a317b75c76d7fb033ed51 369 Pfam PF00005 ABC transporter 20 161 1.3E-31 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS12030 d3a2bd24402a317b75c76d7fb033ed51 369 Pfam PF08402 TOBE domain 281 353 5.3E-12 T 28-03-2018 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 AM393_RS12030 d3a2bd24402a317b75c76d7fb033ed51 369 Gene3D G3DSA:3.40.50.300 1 251 5.5E-70 T 28-03-2018 AM393_RS12030 d3a2bd24402a317b75c76d7fb033ed51 369 SUPERFAMILY SSF52540 4 243 6.88E-85 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS05100 2bd8ac930abfd9733e646ab22d15889f 401 Gene3D G3DSA:3.90.1150.10 279 395 7.4E-35 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM393_RS05100 2bd8ac930abfd9733e646ab22d15889f 401 SUPERFAMILY SSF53383 5 397 2.29E-106 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM393_RS05100 2bd8ac930abfd9733e646ab22d15889f 401 TIGRFAM TIGR03392 FeS_syn_CsdA: cysteine desulfurase, catalytic subunit CsdA 4 401 6.1E-223 T 28-03-2018 IPR022471 Cysteine desulphurase, catalytic subunit, CsdA GO:0016226|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 AM393_RS05100 2bd8ac930abfd9733e646ab22d15889f 401 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 213 232 - T 28-03-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site AM393_RS05100 2bd8ac930abfd9733e646ab22d15889f 401 Gene3D G3DSA:3.40.640.10 32 278 1.2E-57 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM393_RS05100 2bd8ac930abfd9733e646ab22d15889f 401 Pfam PF00266 Aminotransferase class-V 21 388 2.9E-135 T 28-03-2018 IPR000192 Aminotransferase class V domain AM393_RS28055 c359b7858f5a43fa0cb6fe7cb3bcd67b 212 Gene3D G3DSA:3.20.20.70 2 212 3.8E-66 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM393_RS28055 c359b7858f5a43fa0cb6fe7cb3bcd67b 212 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 5 205 2.3E-44 T 28-03-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 AM393_RS28055 c359b7858f5a43fa0cb6fe7cb3bcd67b 212 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 3 212 37.199 T 28-03-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 AM393_RS28055 c359b7858f5a43fa0cb6fe7cb3bcd67b 212 SUPERFAMILY SSF51366 4 209 3.92E-56 T 28-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AM393_RS25445 af10192afa53047cbf33195596657110 424 SMART SM00363 358 419 6.4E-7 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AM393_RS25445 af10192afa53047cbf33195596657110 424 Gene3D G3DSA:3.10.290.10 331 424 2.8E-20 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AM393_RS25445 af10192afa53047cbf33195596657110 424 Gene3D G3DSA:3.40.50.620 1 227 1.8E-70 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM393_RS25445 af10192afa53047cbf33195596657110 424 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 4 423 46.682 T 28-03-2018 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 AM393_RS25445 af10192afa53047cbf33195596657110 424 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 2 424 4.5E-148 T 28-03-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AM393_RS25445 af10192afa53047cbf33195596657110 424 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 52 - T 28-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM393_RS25445 af10192afa53047cbf33195596657110 424 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 46 68 1.7E-32 T 28-03-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AM393_RS25445 af10192afa53047cbf33195596657110 424 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 188 210 1.7E-32 T 28-03-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AM393_RS25445 af10192afa53047cbf33195596657110 424 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 167 182 1.7E-32 T 28-03-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AM393_RS25445 af10192afa53047cbf33195596657110 424 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 221 233 1.7E-32 T 28-03-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AM393_RS25445 af10192afa53047cbf33195596657110 424 Gene3D G3DSA:1.10.240.10 228 330 4.6E-33 T 28-03-2018 AM393_RS25445 af10192afa53047cbf33195596657110 424 SUPERFAMILY SSF52374 4 328 3.47E-109 T 28-03-2018 AM393_RS25445 af10192afa53047cbf33195596657110 424 Pfam PF00579 tRNA synthetases class I (W and Y) 31 328 2.1E-92 T 28-03-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM393_RS25445 af10192afa53047cbf33195596657110 424 SUPERFAMILY SSF55174 327 423 4.84E-20 T 28-03-2018 AM393_RS19140 5a03c5d08455ee31b88dd33a75cf3241 443 Gene3D G3DSA:1.20.1250.20 10 213 2.8E-35 T 28-03-2018 AM393_RS19140 5a03c5d08455ee31b88dd33a75cf3241 443 Pfam PF07690 Major Facilitator Superfamily 25 379 1.7E-53 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS19140 5a03c5d08455ee31b88dd33a75cf3241 443 Gene3D G3DSA:1.20.1250.20 249 443 1.5E-32 T 28-03-2018 AM393_RS19140 5a03c5d08455ee31b88dd33a75cf3241 443 SUPERFAMILY SSF103473 12 439 3.79E-86 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS19140 5a03c5d08455ee31b88dd33a75cf3241 443 PIRSF PIRSF002808 6 441 3.0E-47 T 28-03-2018 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 AM393_RS11185 58fafb08185bc622468aa97431aa770d 506 Pfam PF01078 Magnesium chelatase, subunit ChlI 189 386 2.0E-90 T 28-03-2018 IPR000523 Magnesium chelatase ChlI domain AM393_RS11185 58fafb08185bc622468aa97431aa770d 506 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 6 492 4.9E-226 T 28-03-2018 IPR004482 Mg chelatase-related protein AM393_RS11185 58fafb08185bc622468aa97431aa770d 506 Gene3D G3DSA:3.30.230.10 2 186 1.9E-38 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AM393_RS11185 58fafb08185bc622468aa97431aa770d 506 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 288 302 5.8E-5 T 28-03-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 AM393_RS11185 58fafb08185bc622468aa97431aa770d 506 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 316 329 5.8E-5 T 28-03-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 AM393_RS11185 58fafb08185bc622468aa97431aa770d 506 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 208 223 5.8E-5 T 28-03-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 AM393_RS11185 58fafb08185bc622468aa97431aa770d 506 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 142 7.3E-44 T 28-03-2018 AM393_RS11185 58fafb08185bc622468aa97431aa770d 506 SUPERFAMILY SSF52540 189 499 1.58E-44 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS11185 58fafb08185bc622468aa97431aa770d 506 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 401 492 6.2E-29 T 28-03-2018 IPR025158 Mg chelatase-related protein, C-terminal domain AM393_RS11185 58fafb08185bc622468aa97431aa770d 506 SMART SM00382 209 389 9.4E-8 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS11185 58fafb08185bc622468aa97431aa770d 506 Gene3D G3DSA:3.40.50.300 187 452 3.9E-25 T 28-03-2018 AM393_RS11185 58fafb08185bc622468aa97431aa770d 506 SUPERFAMILY SSF54211 10 169 4.55E-31 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM393_RS21085 d5b81aa4e474d038627549ac3dfcb2ff 347 Gene3D G3DSA:3.40.50.40 239 347 1.2E-26 T 28-03-2018 IPR027473 L-asparaginase, C-terminal domain Reactome: R-HSA-70614 AM393_RS21085 d5b81aa4e474d038627549ac3dfcb2ff 347 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 29 37 - T 28-03-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 AM393_RS21085 d5b81aa4e474d038627549ac3dfcb2ff 347 Pfam PF00710 Asparaginase, N-terminal 26 217 3.4E-58 T 28-03-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 AM393_RS21085 d5b81aa4e474d038627549ac3dfcb2ff 347 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 108 118 - T 28-03-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 AM393_RS21085 d5b81aa4e474d038627549ac3dfcb2ff 347 Gene3D G3DSA:3.40.50.1170 22 235 2.1E-54 T 28-03-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 AM393_RS21085 d5b81aa4e474d038627549ac3dfcb2ff 347 SMART SM00870 26 341 6.2E-136 T 28-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AM393_RS21085 d5b81aa4e474d038627549ac3dfcb2ff 347 PIRSF PIRSF001220 21 347 2.1E-82 T 28-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AM393_RS21085 d5b81aa4e474d038627549ac3dfcb2ff 347 PRINTS PR00139 Asparaginase/glutaminase family signature 286 304 6.5E-22 T 28-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AM393_RS21085 d5b81aa4e474d038627549ac3dfcb2ff 347 PRINTS PR00139 Asparaginase/glutaminase family signature 27 38 6.5E-22 T 28-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AM393_RS21085 d5b81aa4e474d038627549ac3dfcb2ff 347 PRINTS PR00139 Asparaginase/glutaminase family signature 107 125 6.5E-22 T 28-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AM393_RS21085 d5b81aa4e474d038627549ac3dfcb2ff 347 PIRSF PIRSF500176 23 347 1.0E-69 T 28-03-2018 AM393_RS21085 d5b81aa4e474d038627549ac3dfcb2ff 347 SUPERFAMILY SSF53774 24 346 9.16E-99 T 28-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AM393_RS21085 d5b81aa4e474d038627549ac3dfcb2ff 347 TIGRFAM TIGR00520 asnASE_II: L-asparaginase, type II 7 347 7.8E-133 T 28-03-2018 IPR004550 L-asparaginase, type II GO:0004067|GO:0006528 AM393_RS14675 e2dda274ce4e633eefe34bb31b04f513 569 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 291 501 1.5E-37 T 28-03-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 AM393_RS14675 e2dda274ce4e633eefe34bb31b04f513 569 SUPERFAMILY SSF53067 285 542 1.55E-43 T 28-03-2018 AM393_RS14675 e2dda274ce4e633eefe34bb31b04f513 569 SUPERFAMILY SSF53067 5 284 2.04E-21 T 28-03-2018 AM393_RS14675 e2dda274ce4e633eefe34bb31b04f513 569 Gene3D G3DSA:3.30.420.40 1 273 1.5E-38 T 28-03-2018 AM393_RS14675 e2dda274ce4e633eefe34bb31b04f513 569 TIGRFAM TIGR01234 L-ribulokinase: ribulokinase 2 550 1.2E-263 T 28-03-2018 IPR005929 Ribulokinase GO:0005524|GO:0008741|GO:0019569 KEGG: 00040+2.7.1.16 AM393_RS14675 e2dda274ce4e633eefe34bb31b04f513 569 Hamap MF_00520 Ribulokinase [araB]. 1 558 58.587 T 28-03-2018 IPR005929 Ribulokinase GO:0005524|GO:0008741|GO:0019569 KEGG: 00040+2.7.1.16 AM393_RS14675 e2dda274ce4e633eefe34bb31b04f513 569 Gene3D G3DSA:3.30.420.40 274 550 2.2E-52 T 28-03-2018 AM393_RS01705 63a01bfac638092905afc7918dac28a2 631 Pfam PF01501 Glycosyl transferase family 8 280 546 8.0E-43 T 28-03-2018 IPR002495 Glycosyl transferase, family 8 GO:0016757 AM393_RS01705 63a01bfac638092905afc7918dac28a2 631 Pfam PF14393 Domain of unknown function (DUF4422) 6 244 1.3E-73 T 28-03-2018 IPR025536 Domain of unknown function DUF4422 AM393_RS01705 63a01bfac638092905afc7918dac28a2 631 SUPERFAMILY SSF53448 278 566 2.31E-56 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM393_RS01705 63a01bfac638092905afc7918dac28a2 631 Gene3D G3DSA:3.90.550.10 278 573 2.9E-50 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM393_RS19880 9d1976d46f8ca8602c2874877b88012e 588 SMART SM00382 375 560 5.7E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS19880 9d1976d46f8ca8602c2874877b88012e 588 Gene3D G3DSA:3.40.50.300 335 588 5.5E-58 T 28-03-2018 AM393_RS19880 9d1976d46f8ca8602c2874877b88012e 588 SUPERFAMILY SSF90123 11 331 1.05E-54 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AM393_RS19880 9d1976d46f8ca8602c2874877b88012e 588 SUPERFAMILY SSF52540 351 582 1.36E-59 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS19880 9d1976d46f8ca8602c2874877b88012e 588 ProSitePatterns PS00211 ABC transporters family signature. 486 500 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS19880 9d1976d46f8ca8602c2874877b88012e 588 Pfam PF00005 ABC transporter 369 513 3.4E-25 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS19880 9d1976d46f8ca8602c2874877b88012e 588 Pfam PF00664 ABC transporter transmembrane region 25 292 2.2E-47 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AM393_RS19880 9d1976d46f8ca8602c2874877b88012e 588 TIGRFAM TIGR02857 CydD: thiol reductant ABC exporter, CydD subunit 21 556 1.4E-187 T 28-03-2018 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD GO:0005524|GO:0016020|GO:0042883 AM393_RS19880 9d1976d46f8ca8602c2874877b88012e 588 Gene3D G3DSA:1.20.1560.10 6 334 4.9E-42 T 28-03-2018 AM393_RS24880 4ca57b3308c20f13c9a6ad89fea7b15e 338 PRINTS PR00410 Phenol hydroxylase reductase family signature 194 203 5.0E-27 T 28-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AM393_RS24880 4ca57b3308c20f13c9a6ad89fea7b15e 338 PRINTS PR00410 Phenol hydroxylase reductase family signature 234 243 5.0E-27 T 28-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AM393_RS24880 4ca57b3308c20f13c9a6ad89fea7b15e 338 PRINTS PR00410 Phenol hydroxylase reductase family signature 298 306 5.0E-27 T 28-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AM393_RS24880 4ca57b3308c20f13c9a6ad89fea7b15e 338 PRINTS PR00410 Phenol hydroxylase reductase family signature 134 146 5.0E-27 T 28-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AM393_RS24880 4ca57b3308c20f13c9a6ad89fea7b15e 338 PRINTS PR00410 Phenol hydroxylase reductase family signature 209 228 5.0E-27 T 28-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AM393_RS24880 4ca57b3308c20f13c9a6ad89fea7b15e 338 PRINTS PR00410 Phenol hydroxylase reductase family signature 151 158 5.0E-27 T 28-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AM393_RS24880 4ca57b3308c20f13c9a6ad89fea7b15e 338 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 10 86 2.3E-13 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AM393_RS24880 4ca57b3308c20f13c9a6ad89fea7b15e 338 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 40 48 - T 28-03-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AM393_RS24880 4ca57b3308c20f13c9a6ad89fea7b15e 338 Gene3D G3DSA:3.10.20.30 1 102 5.0E-22 T 28-03-2018 IPR012675 Beta-grasp domain AM393_RS24880 4ca57b3308c20f13c9a6ad89fea7b15e 338 SUPERFAMILY SSF63380 78 203 2.38E-24 T 28-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AM393_RS24880 4ca57b3308c20f13c9a6ad89fea7b15e 338 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 209 228 2.4E-7 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AM393_RS24880 4ca57b3308c20f13c9a6ad89fea7b15e 338 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 298 306 2.4E-7 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AM393_RS24880 4ca57b3308c20f13c9a6ad89fea7b15e 338 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 151 158 2.4E-7 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AM393_RS24880 4ca57b3308c20f13c9a6ad89fea7b15e 338 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 134 144 2.4E-7 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AM393_RS24880 4ca57b3308c20f13c9a6ad89fea7b15e 338 SUPERFAMILY SSF52343 200 332 4.45E-33 T 28-03-2018 AM393_RS24880 4ca57b3308c20f13c9a6ad89fea7b15e 338 Pfam PF00175 Oxidoreductase NAD-binding domain 210 312 1.6E-20 T 28-03-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AM393_RS24880 4ca57b3308c20f13c9a6ad89fea7b15e 338 Gene3D G3DSA:3.40.50.80 200 330 2.2E-24 T 28-03-2018 AM393_RS24880 4ca57b3308c20f13c9a6ad89fea7b15e 338 Gene3D G3DSA:2.40.30.10 105 199 2.8E-21 T 28-03-2018 AM393_RS24880 4ca57b3308c20f13c9a6ad89fea7b15e 338 SUPERFAMILY SSF54292 5 94 2.1E-24 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AM393_RS24880 4ca57b3308c20f13c9a6ad89fea7b15e 338 Pfam PF00970 Oxidoreductase FAD-binding domain 110 200 8.3E-15 T 28-03-2018 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 AM393_RS08840 9d00bebc9a2c4f04b76ec61e49ef7dfe 122 Gene3D G3DSA:1.10.3290.10 4 108 1.0E-10 T 28-03-2018 IPR003812 Fido domain AM393_RS08840 9d00bebc9a2c4f04b76ec61e49ef7dfe 122 SUPERFAMILY SSF140931 4 92 4.45E-10 T 28-03-2018 IPR003812 Fido domain AM393_RS08840 9d00bebc9a2c4f04b76ec61e49ef7dfe 122 Pfam PF02661 Fic/DOC family 12 86 7.3E-8 T 28-03-2018 IPR003812 Fido domain AM393_RS08840 9d00bebc9a2c4f04b76ec61e49ef7dfe 122 PIRSF PIRSF018297 2 122 1.1E-30 T 28-03-2018 IPR006440 Death on curing protein GO:0016301 AM393_RS08840 9d00bebc9a2c4f04b76ec61e49ef7dfe 122 TIGRFAM TIGR01550 DOC_P1: death-on-curing family protein 6 116 2.9E-22 T 28-03-2018 IPR006440 Death on curing protein GO:0016301 AM393_RS04020 1c5987b9aa19e44dc336b970bb9ff8c6 292 SUPERFAMILY SSF111331 7 289 1.44E-91 T 28-03-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain AM393_RS04020 1c5987b9aa19e44dc336b970bb9ff8c6 292 Pfam PF01513 ATP-NAD kinase 8 271 1.4E-75 T 28-03-2018 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 AM393_RS04020 1c5987b9aa19e44dc336b970bb9ff8c6 292 Gene3D G3DSA:3.40.50.10330 1 141 3.7E-38 T 28-03-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 AM393_RS04020 1c5987b9aa19e44dc336b970bb9ff8c6 292 Hamap MF_00361 NAD kinase [nadK]. 6 287 33.099 T 28-03-2018 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 AM393_RS04020 1c5987b9aa19e44dc336b970bb9ff8c6 292 Gene3D G3DSA:2.60.200.30 142 264 1.3E-40 T 28-03-2018 IPR017437 ATP-NAD kinase, PpnK-type, all-beta GO:0003951|GO:0008152|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 AM393_RS04990 0214af03f7bd414568e7ca96e285468a 407 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 22 117 1.3E-4 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AM393_RS04990 0214af03f7bd414568e7ca96e285468a 407 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 130 209 3.3E-9 T 28-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AM393_RS04990 0214af03f7bd414568e7ca96e285468a 407 Gene3D G3DSA:1.10.540.10 4 119 1.6E-13 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AM393_RS04990 0214af03f7bd414568e7ca96e285468a 407 SUPERFAMILY SSF56645 7 218 2.49E-43 T 28-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AM393_RS04990 0214af03f7bd414568e7ca96e285468a 407 Gene3D G3DSA:2.40.110.10 120 218 6.7E-17 T 28-03-2018 AM393_RS04990 0214af03f7bd414568e7ca96e285468a 407 SUPERFAMILY SSF47203 232 375 1.1E-7 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AM393_RS04990 0214af03f7bd414568e7ca96e285468a 407 PIRSF PIRSF016578 130 393 3.1E-16 T 28-03-2018 AM393_RS04990 0214af03f7bd414568e7ca96e285468a 407 PIRSF PIRSF016578 4 83 8.6E-8 T 28-03-2018 AM393_RS04990 0214af03f7bd414568e7ca96e285468a 407 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 250 374 7.6E-6 T 28-03-2018 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain AM393_RS04990 0214af03f7bd414568e7ca96e285468a 407 Gene3D G3DSA:1.20.140.10 219 399 3.6E-13 T 28-03-2018 AM393_RS04925 e2722abd3829a201f52648123563feb6 379 Pfam PF02595 Glycerate kinase family 3 373 1.5E-151 T 28-03-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 AM393_RS04925 e2722abd3829a201f52648123563feb6 379 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 2 375 2.2E-167 T 28-03-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 AM393_RS04925 e2722abd3829a201f52648123563feb6 379 SUPERFAMILY SSF110738 1 375 1.31E-143 T 28-03-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 AM393_RS04925 e2722abd3829a201f52648123563feb6 379 PIRSF PIRSF006078 1 377 5.5E-140 T 28-03-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 AM393_RS04925 e2722abd3829a201f52648123563feb6 379 Gene3D G3DSA:3.90.1510.10 42 276 2.2E-98 T 28-03-2018 IPR018193 Glycerate kinase, flavodoxin-like domain GO:0008887|GO:0031388 AM393_RS21070 cca98a37e65e04b77a2ef481bbde0838 296 SUPERFAMILY SSF46785 1 84 3.52E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS21070 cca98a37e65e04b77a2ef481bbde0838 296 Gene3D G3DSA:3.40.190.10 179 270 2.4E-22 T 28-03-2018 AM393_RS21070 cca98a37e65e04b77a2ef481bbde0838 296 SUPERFAMILY SSF53850 88 293 3.26E-36 T 28-03-2018 AM393_RS21070 cca98a37e65e04b77a2ef481bbde0838 296 Gene3D G3DSA:1.10.10.10 1 82 5.4E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS21070 cca98a37e65e04b77a2ef481bbde0838 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 6.2E-11 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS21070 cca98a37e65e04b77a2ef481bbde0838 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 6.2E-11 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS21070 cca98a37e65e04b77a2ef481bbde0838 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 6.2E-11 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS21070 cca98a37e65e04b77a2ef481bbde0838 296 Gene3D G3DSA:3.40.190.10 88 178 1.8E-19 T 28-03-2018 AM393_RS21070 cca98a37e65e04b77a2ef481bbde0838 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.4E-21 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS21070 cca98a37e65e04b77a2ef481bbde0838 296 Pfam PF03466 LysR substrate binding domain 87 292 1.0E-41 T 28-03-2018 IPR005119 LysR, substrate-binding AM393_RS04615 4daaf514f387e8149ccc3d14642455fa 466 Gene3D G3DSA:3.20.20.80 3 466 2.6E-128 T 28-03-2018 AM393_RS04615 4daaf514f387e8149ccc3d14642455fa 466 Pfam PF00232 Glycosyl hydrolase family 1 3 462 2.8E-110 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AM393_RS04615 4daaf514f387e8149ccc3d14642455fa 466 PRINTS PR00131 Glycosyl hydrolase family 1 signature 431 443 1.2E-9 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AM393_RS04615 4daaf514f387e8149ccc3d14642455fa 466 PRINTS PR00131 Glycosyl hydrolase family 1 signature 407 424 1.2E-9 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AM393_RS04615 4daaf514f387e8149ccc3d14642455fa 466 PRINTS PR00131 Glycosyl hydrolase family 1 signature 289 303 1.2E-9 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AM393_RS04615 4daaf514f387e8149ccc3d14642455fa 466 PRINTS PR00131 Glycosyl hydrolase family 1 signature 386 397 1.2E-9 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AM393_RS04615 4daaf514f387e8149ccc3d14642455fa 466 SUPERFAMILY SSF51445 4 462 2.99E-136 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily AM393_RS14280 357c3071278ec7b424ea319c232de26c 109 Gene3D G3DSA:1.10.1270.10 8 108 5.0E-28 T 28-03-2018 AM393_RS14280 357c3071278ec7b424ea319c232de26c 109 SUPERFAMILY SSF48295 5 104 3.45E-29 T 28-03-2018 IPR010921 Trp repressor/replication initiator GO:0043565 AM393_RS14280 357c3071278ec7b424ea319c232de26c 109 ProDom PD012582 REPRESSOR TRANSCRIPTION TRP OPERON DNA-BINDING REGULATION HOMOLOG AROH FOR TRYPTOPHAN 10 101 6.0E-40 T 28-03-2018 IPR013335 Trp repressor, bacterial GO:0006355 AM393_RS14280 357c3071278ec7b424ea319c232de26c 109 Hamap MF_00475 Trp operon repressor [trpR]. 15 108 24.03 T 28-03-2018 IPR013335 Trp repressor, bacterial GO:0006355 AM393_RS14280 357c3071278ec7b424ea319c232de26c 109 TIGRFAM TIGR01321 TrpR: trp operon repressor 12 104 2.9E-40 T 28-03-2018 IPR013335 Trp repressor, bacterial GO:0006355 AM393_RS14280 357c3071278ec7b424ea319c232de26c 109 PIRSF PIRSF003196 1 109 1.9E-40 T 28-03-2018 IPR013335 Trp repressor, bacterial GO:0006355 AM393_RS14280 357c3071278ec7b424ea319c232de26c 109 Pfam PF01371 Trp repressor protein 17 103 2.1E-28 T 28-03-2018 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 AM393_RS01735 c2b53c741c523f2fb11445fcde8179a9 471 Gene3D G3DSA:2.60.120.10 339 448 1.6E-29 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AM393_RS01735 c2b53c741c523f2fb11445fcde8179a9 471 Gene3D G3DSA:3.90.550.10 1 338 5.7E-98 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM393_RS01735 c2b53c741c523f2fb11445fcde8179a9 471 Pfam PF01050 Mannose-6-phosphate isomerase 316 466 4.2E-64 T 28-03-2018 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 AM393_RS01735 c2b53c741c523f2fb11445fcde8179a9 471 SUPERFAMILY SSF51182 186 470 1.46E-83 T 28-03-2018 IPR011051 RmlC-like cupin domain AM393_RS01735 c2b53c741c523f2fb11445fcde8179a9 471 TIGRFAM TIGR01479 GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 2 470 3.2E-224 T 28-03-2018 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GO:0000271|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 AM393_RS01735 c2b53c741c523f2fb11445fcde8179a9 471 SUPERFAMILY SSF53448 2 282 6.08E-76 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM393_RS01735 c2b53c741c523f2fb11445fcde8179a9 471 Pfam PF00483 Nucleotidyl transferase 4 288 1.3E-75 T 28-03-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 AM393_RS24860 79524a512f38602237e43a56da901d0d 294 Pfam PF12800 4Fe-4S binding domain 38 50 0.14 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM393_RS24860 79524a512f38602237e43a56da901d0d 294 Gene3D G3DSA:1.20.5.480 256 291 4.4E-22 T 28-03-2018 AM393_RS24860 79524a512f38602237e43a56da901d0d 294 Gene3D G3DSA:3.30.70.20 43 113 2.7E-20 T 28-03-2018 AM393_RS24860 79524a512f38602237e43a56da901d0d 294 SUPERFAMILY SSF54862 26 262 2.72E-71 T 28-03-2018 AM393_RS24860 79524a512f38602237e43a56da901d0d 294 Gene3D G3DSA:3.30.70.20 9 42 0.014 T 28-03-2018 AM393_RS24860 79524a512f38602237e43a56da901d0d 294 Gene3D G3DSA:3.30.70.20 114 152 2.5E-16 T 28-03-2018 AM393_RS24860 79524a512f38602237e43a56da901d0d 294 PIRSF PIRSF036298 1 294 1.5E-160 T 28-03-2018 IPR014603 Formate dehydrogenase iron-sulphur subunit GO:0015944|GO:0045333|GO:0051539 AM393_RS24860 79524a512f38602237e43a56da901d0d 294 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 133 144 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM393_RS24860 79524a512f38602237e43a56da901d0d 294 Pfam PF09163 Formate dehydrogenase N, transmembrane 246 289 7.3E-19 T 28-03-2018 IPR015246 Formate dehydrogenase, transmembrane AM393_RS24860 79524a512f38602237e43a56da901d0d 294 Gene3D G3DSA:3.30.70.20 153 255 1.3E-23 T 28-03-2018 AM393_RS24860 79524a512f38602237e43a56da901d0d 294 TIGRFAM TIGR01582 FDH-beta: formate dehydrogenase, beta subunit 7 290 2.0E-146 T 28-03-2018 IPR006470 Formate dehydrogenase iron-sulphur subunit, Proteobacteria GO:0015944|GO:0016021|GO:0045333|GO:0051539 AM393_RS24860 79524a512f38602237e43a56da901d0d 294 Pfam PF13247 4Fe-4S dicluster domain 92 188 1.1E-25 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM393_RS24060 071a426b06c76297c057dded3bebc28e 240 Pfam PF07690 Major Facilitator Superfamily 34 135 1.4E-13 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS24060 071a426b06c76297c057dded3bebc28e 240 SUPERFAMILY SSF103473 12 140 5.23E-23 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS24060 071a426b06c76297c057dded3bebc28e 240 Gene3D G3DSA:1.20.1250.20 18 174 1.4E-19 T 28-03-2018 AM393_RS11985 a5e8502cad049bfe460ccdd19cdf7e85 126 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 2 124 4.2E-48 T 28-03-2018 IPR006056 RidA family AM393_RS11985 a5e8502cad049bfe460ccdd19cdf7e85 126 Pfam PF01042 Endoribonuclease L-PSP 6 123 8.0E-41 T 28-03-2018 IPR006175 YjgF/YER057c/UK114 family AM393_RS11985 a5e8502cad049bfe460ccdd19cdf7e85 126 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 101 119 - T 28-03-2018 IPR019897 RidA, conserved site AM393_RS11985 a5e8502cad049bfe460ccdd19cdf7e85 126 Gene3D G3DSA:3.30.1330.40 1 126 2.9E-42 T 28-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AM393_RS11985 a5e8502cad049bfe460ccdd19cdf7e85 126 SUPERFAMILY SSF55298 2 124 2.67E-40 T 28-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AM393_RS05430 ac0178f548c2e1f6bbd4687e498a0b7d 237 Pfam PF03741 Integral membrane protein TerC family 17 203 1.9E-53 T 28-03-2018 IPR005496 Integral membrane protein TerC GO:0016021 AM393_RS24115 e70c8e0e26d6bc6c3d5acfbbbf0be243 260 Pfam PF00005 ABC transporter 26 180 1.8E-32 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS24115 e70c8e0e26d6bc6c3d5acfbbbf0be243 260 Gene3D G3DSA:3.40.50.300 8 241 1.6E-55 T 28-03-2018 AM393_RS24115 e70c8e0e26d6bc6c3d5acfbbbf0be243 260 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS24115 e70c8e0e26d6bc6c3d5acfbbbf0be243 260 SUPERFAMILY SSF52540 10 235 5.8E-61 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS24115 e70c8e0e26d6bc6c3d5acfbbbf0be243 260 SMART SM00382 35 228 7.0E-16 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS09040 fbaba00285ad3356a4009c3762f82a62 132 Pfam PF01402 Ribbon-helix-helix protein, copG family 3 42 3.0E-10 T 28-03-2018 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 AM393_RS09040 fbaba00285ad3356a4009c3762f82a62 132 Pfam PF08753 NikR C terminal nickel binding domain 54 127 7.9E-28 T 28-03-2018 IPR014864 Transcription factor, NikR, nickel binding C-terminal AM393_RS09040 fbaba00285ad3356a4009c3762f82a62 132 Hamap MF_00476 Nickel-responsive regulator [nikR]. 1 131 26.803 T 28-03-2018 IPR022988 Nickel-responsive transcriptional regulator NikR GO:0003677|GO:0006355|GO:0010045|GO:0016151 AM393_RS09040 fbaba00285ad3356a4009c3762f82a62 132 Gene3D G3DSA:1.10.1220.10 1 36 6.0E-12 T 28-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 AM393_RS09040 fbaba00285ad3356a4009c3762f82a62 132 Gene3D G3DSA:3.30.70.1150 37 127 9.3E-32 T 28-03-2018 AM393_RS09040 fbaba00285ad3356a4009c3762f82a62 132 SUPERFAMILY SSF47598 1 43 3.72E-10 T 28-03-2018 IPR010985 Ribbon-helix-helix GO:0006355 AM393_RS09040 fbaba00285ad3356a4009c3762f82a62 132 TIGRFAM TIGR02793 nikR: nickel-responsive transcriptional regulator NikR 2 129 2.2E-60 T 28-03-2018 IPR014160 Nickel-responsive transcriptional regulator NikR, proteobacteria GO:0010045|GO:0016151 AM393_RS09040 fbaba00285ad3356a4009c3762f82a62 132 SUPERFAMILY SSF55021 53 129 2.75E-25 T 28-03-2018 AM393_RS03205 ec794ec62df92c66e3fcf0d6b52102c2 141 SUPERFAMILY SSF55729 1 129 9.16E-31 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM393_RS03205 ec794ec62df92c66e3fcf0d6b52102c2 141 Hamap MF_01127 Acetyltransferase YpeA [ypeA]. 1 141 48.062 T 28-03-2018 IPR023072 Acetyltransferase, YpeA GO:0016747 AM393_RS03205 ec794ec62df92c66e3fcf0d6b52102c2 141 PIRSF PIRSF037663 1 133 8.1E-11 T 28-03-2018 IPR017255 Acetyltransferase, GNAT, predicted AM393_RS03205 ec794ec62df92c66e3fcf0d6b52102c2 141 Gene3D G3DSA:3.40.630.30 1 141 3.1E-35 T 28-03-2018 AM393_RS03205 ec794ec62df92c66e3fcf0d6b52102c2 141 Pfam PF00583 Acetyltransferase (GNAT) family 15 123 3.1E-20 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AM393_RS15860 72a2e08fe8e828dd4daeda8280e992d1 417 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 323 344 - T 28-03-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AM393_RS15860 72a2e08fe8e828dd4daeda8280e992d1 417 Pfam PF00171 Aldehyde dehydrogenase family 8 280 3.5E-16 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AM393_RS15860 72a2e08fe8e828dd4daeda8280e992d1 417 Gene3D G3DSA:3.40.605.10 2 237 1.2E-42 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AM393_RS15860 72a2e08fe8e828dd4daeda8280e992d1 417 Gene3D G3DSA:3.40.605.10 238 417 2.4E-38 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AM393_RS15860 72a2e08fe8e828dd4daeda8280e992d1 417 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 1 416 41.64 T 28-03-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AM393_RS15860 72a2e08fe8e828dd4daeda8280e992d1 417 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 9 406 3.5E-191 T 28-03-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AM393_RS15860 72a2e08fe8e828dd4daeda8280e992d1 417 SUPERFAMILY SSF53720 3 415 1.17E-115 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AM393_RS15860 72a2e08fe8e828dd4daeda8280e992d1 417 PIRSF PIRSF000151 1 417 4.8E-176 T 28-03-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 AM393_RS22320 39963f3cbaa96913583021ad1aa09799 163 SUPERFAMILY SSF141452 2 160 1.83E-44 T 28-03-2018 IPR008514 Type VI secretion system effector, Hcp AM393_RS22320 39963f3cbaa96913583021ad1aa09799 163 Pfam PF05638 Type VI secretion system effector, Hcp 6 146 4.4E-37 T 28-03-2018 IPR008514 Type VI secretion system effector, Hcp AM393_RS22320 39963f3cbaa96913583021ad1aa09799 163 Gene3D G3DSA:2.30.110.20 1 163 3.3E-52 T 28-03-2018 IPR008514 Type VI secretion system effector, Hcp AM393_RS22320 39963f3cbaa96913583021ad1aa09799 163 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 160 3.1E-50 T 28-03-2018 IPR008514 Type VI secretion system effector, Hcp AM393_RS25995 4ff8f42101841344f8f7e7d3a48ad29c 219 Pfam PF03379 CcmB protein 2 215 6.1E-83 T 28-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM393_RS25995 4ff8f42101841344f8f7e7d3a48ad29c 219 PIRSF PIRSF002764 1 219 8.9E-79 T 28-03-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria AM393_RS25995 4ff8f42101841344f8f7e7d3a48ad29c 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 52 69 2.7E-67 T 28-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM393_RS25995 4ff8f42101841344f8f7e7d3a48ad29c 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 131 154 2.7E-67 T 28-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM393_RS25995 4ff8f42101841344f8f7e7d3a48ad29c 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 100 118 2.7E-67 T 28-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM393_RS25995 4ff8f42101841344f8f7e7d3a48ad29c 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 26 47 2.7E-67 T 28-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM393_RS25995 4ff8f42101841344f8f7e7d3a48ad29c 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 75 98 2.7E-67 T 28-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM393_RS25995 4ff8f42101841344f8f7e7d3a48ad29c 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 192 215 2.7E-67 T 28-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM393_RS25995 4ff8f42101841344f8f7e7d3a48ad29c 219 TIGRFAM TIGR01190 ccmB: heme exporter protein CcmB 5 215 3.6E-87 T 28-03-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria AM393_RS13470 3655ad7a3c3a588d71e9e74703c76312 188 Pfam PF07455 Phage polarity suppression protein (Psu) 6 186 2.9E-65 T 28-03-2018 IPR010006 Bacteriophage P4, Psu, polarity suppression protein AM393_RS13470 3655ad7a3c3a588d71e9e74703c76312 188 ProDom PD037484 CAPSID DETERMINATION SIZE HEAD GLYCOPROTEIN SID MORPHOGENESIS CP-933I ENCODED LATE 62 173 5.0E-5 T 28-03-2018 AM393_RS21795 bab2a89791c8a3762a0bb3987b2e275a 269 Pfam PF00005 ABC transporter 31 178 3.0E-32 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS21795 bab2a89791c8a3762a0bb3987b2e275a 269 SUPERFAMILY SSF52540 5 251 6.25E-57 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS21795 bab2a89791c8a3762a0bb3987b2e275a 269 SMART SM00382 39 228 1.1E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS21795 bab2a89791c8a3762a0bb3987b2e275a 269 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS21795 bab2a89791c8a3762a0bb3987b2e275a 269 Gene3D G3DSA:3.40.50.300 2 257 5.5E-66 T 28-03-2018 AM393_RS13145 92536b39f24c07cb7c3ee8b431f615fa 384 Gene3D G3DSA:2.130.10.10 172 384 1.3E-29 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 AM393_RS13145 92536b39f24c07cb7c3ee8b431f615fa 384 SUPERFAMILY SSF51004 44 377 1.2E-41 T 28-03-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain AM393_RS13145 92536b39f24c07cb7c3ee8b431f615fa 384 Pfam PF10282 Lactonase, 7-bladed beta-propeller 27 379 1.2E-105 T 28-03-2018 IPR019405 Lactonase, 7-bladed beta propeller AM393_RS13145 92536b39f24c07cb7c3ee8b431f615fa 384 Gene3D G3DSA:2.130.10.10 14 171 1.5E-16 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 AM393_RS10505 9d595bd5502ebeb375015001beadd600 287 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 273 286 - T 28-03-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM393_RS10505 9d595bd5502ebeb375015001beadd600 287 PRINTS PR00126 ATP synthase gamma subunit signature 166 183 2.8E-37 T 28-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM393_RS10505 9d595bd5502ebeb375015001beadd600 287 PRINTS PR00126 ATP synthase gamma subunit signature 234 253 2.8E-37 T 28-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM393_RS10505 9d595bd5502ebeb375015001beadd600 287 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 2.8E-37 T 28-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM393_RS10505 9d595bd5502ebeb375015001beadd600 287 PRINTS PR00126 ATP synthase gamma subunit signature 265 286 2.8E-37 T 28-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM393_RS10505 9d595bd5502ebeb375015001beadd600 287 Pfam PF00231 ATP synthase 5 286 1.8E-96 T 28-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM393_RS10505 9d595bd5502ebeb375015001beadd600 287 Gene3D G3DSA:1.10.287.80 240 282 1.7E-14 T 28-03-2018 AM393_RS10505 9d595bd5502ebeb375015001beadd600 287 Gene3D G3DSA:1.10.287.80 2 41 3.4E-18 T 28-03-2018 AM393_RS10505 9d595bd5502ebeb375015001beadd600 287 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 287 1.6E-112 T 28-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM393_RS10505 9d595bd5502ebeb375015001beadd600 287 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 287 36.464 T 28-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM393_RS10505 9d595bd5502ebeb375015001beadd600 287 SUPERFAMILY SSF52943 2 287 4.05E-97 T 28-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM393_RS10505 9d595bd5502ebeb375015001beadd600 287 Gene3D G3DSA:3.40.1380.10 42 239 4.4E-75 T 28-03-2018 AM393_RS18915 7a971e7dd0c608e6478fcd4bde8b1a94 184 ProSitePatterns PS00622 LuxR-type HTH domain signature. 131 158 - T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS18915 7a971e7dd0c608e6478fcd4bde8b1a94 184 Gene3D G3DSA:1.10.10.10 46 177 4.2E-8 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS18915 7a971e7dd0c608e6478fcd4bde8b1a94 184 Pfam PF00196 Bacterial regulatory proteins, luxR family 116 167 9.5E-9 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS18915 7a971e7dd0c608e6478fcd4bde8b1a94 184 SUPERFAMILY SSF46894 107 170 4.76E-11 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM393_RS18915 7a971e7dd0c608e6478fcd4bde8b1a94 184 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 117 131 2.0E-5 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS18915 7a971e7dd0c608e6478fcd4bde8b1a94 184 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 131 147 2.0E-5 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS18915 7a971e7dd0c608e6478fcd4bde8b1a94 184 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 147 159 2.0E-5 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS18915 7a971e7dd0c608e6478fcd4bde8b1a94 184 SMART SM00421 114 171 1.4E-8 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS18205 35e2479f31d58d91db9fbec1a44f2966 208 SMART SM00470 47 145 9.9E-5 T 28-03-2018 IPR003115 ParB/Sulfiredoxin AM393_RS18205 35e2479f31d58d91db9fbec1a44f2966 208 Pfam PF02195 ParB-like nuclease domain 48 144 4.4E-12 T 28-03-2018 IPR003115 ParB/Sulfiredoxin AM393_RS18205 35e2479f31d58d91db9fbec1a44f2966 208 SUPERFAMILY SSF110849 45 178 1.1E-21 T 28-03-2018 IPR003115 ParB/Sulfiredoxin AM393_RS18205 35e2479f31d58d91db9fbec1a44f2966 208 Gene3D G3DSA:3.90.1530.10 40 149 1.1E-10 T 28-03-2018 AM393_RS03445 4e150bec11ff7bd40028f4c5f1c8d28d 345 Gene3D G3DSA:3.30.1330.10 31 161 6.9E-53 T 28-03-2018 IPR016188 PurM-like, N-terminal domain AM393_RS03445 4e150bec11ff7bd40028f4c5f1c8d28d 345 SUPERFAMILY SSF56042 171 342 3.89E-64 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain AM393_RS03445 4e150bec11ff7bd40028f4c5f1c8d28d 345 SUPERFAMILY SSF55326 7 170 4.19E-53 T 28-03-2018 IPR016188 PurM-like, N-terminal domain AM393_RS03445 4e150bec11ff7bd40028f4c5f1c8d28d 345 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 7 344 47.352 T 28-03-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AM393_RS03445 4e150bec11ff7bd40028f4c5f1c8d28d 345 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 7 335 1.6E-153 T 28-03-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AM393_RS03445 4e150bec11ff7bd40028f4c5f1c8d28d 345 Gene3D G3DSA:3.90.650.10 171 345 3.0E-63 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain AM393_RS03445 4e150bec11ff7bd40028f4c5f1c8d28d 345 Pfam PF00586 AIR synthase related protein, N-terminal domain 59 164 3.1E-15 T 28-03-2018 IPR016188 PurM-like, N-terminal domain AM393_RS03445 4e150bec11ff7bd40028f4c5f1c8d28d 345 Pfam PF02769 AIR synthase related protein, C-terminal domain 177 341 8.1E-38 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain AM393_RS14840 7fa882b46bd7c3bfbe7abdf8c9b6c2dc 438 Gene3D G3DSA:3.40.1190.10 95 299 8.3E-62 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AM393_RS14840 7fa882b46bd7c3bfbe7abdf8c9b6c2dc 438 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 8 435 9.3E-130 T 28-03-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM393_RS14840 7fa882b46bd7c3bfbe7abdf8c9b6c2dc 438 SUPERFAMILY SSF51984 3 94 7.46E-24 T 28-03-2018 AM393_RS14840 7fa882b46bd7c3bfbe7abdf8c9b6c2dc 438 Gene3D G3DSA:3.90.190.20 300 434 1.0E-35 T 28-03-2018 AM393_RS14840 7fa882b46bd7c3bfbe7abdf8c9b6c2dc 438 Pfam PF02875 Mur ligase family, glutamate ligase domain 301 360 7.1E-8 T 28-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AM393_RS14840 7fa882b46bd7c3bfbe7abdf8c9b6c2dc 438 Gene3D G3DSA:3.40.50.720 1 94 3.0E-14 T 28-03-2018 AM393_RS14840 7fa882b46bd7c3bfbe7abdf8c9b6c2dc 438 SUPERFAMILY SSF53244 299 437 3.66E-51 T 28-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AM393_RS14840 7fa882b46bd7c3bfbe7abdf8c9b6c2dc 438 SUPERFAMILY SSF53623 95 297 7.59E-58 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AM393_RS14840 7fa882b46bd7c3bfbe7abdf8c9b6c2dc 438 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 7 437 35.141 T 28-03-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM393_RS14840 7fa882b46bd7c3bfbe7abdf8c9b6c2dc 438 Pfam PF08245 Mur ligase middle domain 110 280 9.4E-29 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AM393_RS14350 632049de213c0e1f4c4a7ced70522648 309 SUPERFAMILY SSF54211 1 160 2.73E-31 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM393_RS14350 632049de213c0e1f4c4a7ced70522648 309 PIRSF PIRSF000676 1 309 2.6E-86 T 28-03-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 AM393_RS14350 632049de213c0e1f4c4a7ced70522648 309 Gene3D G3DSA:3.30.230.10 1 165 3.8E-26 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AM393_RS14350 632049de213c0e1f4c4a7ced70522648 309 Hamap MF_00384 Homoserine kinase [thrB]. 2 307 30.94 T 28-03-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 AM393_RS14350 632049de213c0e1f4c4a7ced70522648 309 Pfam PF00288 GHMP kinases N terminal domain 85 150 5.5E-15 T 28-03-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 AM393_RS14350 632049de213c0e1f4c4a7ced70522648 309 PRINTS PR00958 Homoserine kinase signature 175 192 1.6E-33 T 28-03-2018 AM393_RS14350 632049de213c0e1f4c4a7ced70522648 309 PRINTS PR00958 Homoserine kinase signature 254 269 1.6E-33 T 28-03-2018 AM393_RS14350 632049de213c0e1f4c4a7ced70522648 309 PRINTS PR00958 Homoserine kinase signature 137 150 1.6E-33 T 28-03-2018 AM393_RS14350 632049de213c0e1f4c4a7ced70522648 309 PRINTS PR00958 Homoserine kinase signature 9 24 1.6E-33 T 28-03-2018 AM393_RS14350 632049de213c0e1f4c4a7ced70522648 309 PRINTS PR00958 Homoserine kinase signature 97 112 1.6E-33 T 28-03-2018 AM393_RS14350 632049de213c0e1f4c4a7ced70522648 309 Gene3D G3DSA:3.30.70.890 168 309 1.5E-30 T 28-03-2018 IPR013750 GHMP kinase, C-terminal domain AM393_RS14350 632049de213c0e1f4c4a7ced70522648 309 SUPERFAMILY SSF55060 172 289 7.19E-34 T 28-03-2018 IPR013750 GHMP kinase, C-terminal domain AM393_RS14350 632049de213c0e1f4c4a7ced70522648 309 TIGRFAM TIGR00191 thrB: homoserine kinase 2 308 1.7E-119 T 28-03-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 AM393_RS14350 632049de213c0e1f4c4a7ced70522648 309 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 90 101 - T 28-03-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 AM393_RS14350 632049de213c0e1f4c4a7ced70522648 309 Pfam PF08544 GHMP kinases C terminal 212 284 6.7E-10 T 28-03-2018 IPR013750 GHMP kinase, C-terminal domain AM393_RS01720 d14b62735593d4bc67d4d8223994b8fd 334 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 323 9.6E-59 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS01720 d14b62735593d4bc67d4d8223994b8fd 334 PRINTS PR01713 Nucleotide sugar epimerase signature 294 311 2.7E-29 T 28-03-2018 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-70370 AM393_RS01720 d14b62735593d4bc67d4d8223994b8fd 334 PRINTS PR01713 Nucleotide sugar epimerase signature 29 45 2.7E-29 T 28-03-2018 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-70370 AM393_RS01720 d14b62735593d4bc67d4d8223994b8fd 334 PRINTS PR01713 Nucleotide sugar epimerase signature 215 230 2.7E-29 T 28-03-2018 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-70370 AM393_RS01720 d14b62735593d4bc67d4d8223994b8fd 334 PRINTS PR01713 Nucleotide sugar epimerase signature 255 270 2.7E-29 T 28-03-2018 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-70370 AM393_RS01720 d14b62735593d4bc67d4d8223994b8fd 334 Gene3D G3DSA:3.40.50.720 2 194 4.0E-39 T 28-03-2018 AM393_RS01720 d14b62735593d4bc67d4d8223994b8fd 334 SUPERFAMILY SSF51735 1 332 2.05E-92 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS01720 d14b62735593d4bc67d4d8223994b8fd 334 Gene3D G3DSA:3.90.25.10 195 334 4.2E-35 T 28-03-2018 AM393_RS02605 06fee418297da5624547d0ebdab80897 321 Pfam PF13378 Enolase C-terminal domain-like 123 281 7.8E-18 T 28-03-2018 IPR029065 Enolase C-terminal domain-like AM393_RS02605 06fee418297da5624547d0ebdab80897 321 Hamap MF_00470 o-succinylbenzoate synthase [menC]. 4 318 23.891 T 28-03-2018 IPR010196 o-Succinylbenzoate synthase, MenC type1 GO:0000287|GO:0009234|GO:0016836 KEGG: 00010+4.2.1.11|KEGG: 00130+4.2.1.113|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-5837|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM393_RS02605 06fee418297da5624547d0ebdab80897 321 SUPERFAMILY SSF51604 107 307 9.69E-52 T 28-03-2018 IPR029065 Enolase C-terminal domain-like AM393_RS02605 06fee418297da5624547d0ebdab80897 321 Gene3D G3DSA:3.30.390.10 2 109 5.0E-16 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM393_RS02605 06fee418297da5624547d0ebdab80897 321 Gene3D G3DSA:3.20.20.120 110 295 1.1E-40 T 28-03-2018 IPR029065 Enolase C-terminal domain-like AM393_RS02605 06fee418297da5624547d0ebdab80897 321 SMART SM00922 115 210 4.1E-12 T 28-03-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal AM393_RS02605 06fee418297da5624547d0ebdab80897 321 SUPERFAMILY SSF54826 1 99 1.14E-25 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM393_RS02605 06fee418297da5624547d0ebdab80897 321 TIGRFAM TIGR01927 menC_gamma/gm+: o-succinylbenzoate synthase 7 307 5.4E-119 T 28-03-2018 AM393_RS26865 0ea4adc1f57521a6aea2b4bf2b170faf 348 Gene3D G3DSA:1.10.1660.10 59 129 1.1E-8 T 28-03-2018 AM393_RS26865 0ea4adc1f57521a6aea2b4bf2b170faf 348 Gene3D G3DSA:1.10.490.50 148 232 3.0E-11 T 28-03-2018 AM393_RS26865 0ea4adc1f57521a6aea2b4bf2b170faf 348 Gene3D G3DSA:1.10.490.50 256 340 4.8E-8 T 28-03-2018 AM393_RS26865 0ea4adc1f57521a6aea2b4bf2b170faf 348 SUPERFAMILY SSF46955 5 110 1.76E-26 T 28-03-2018 IPR009061 Putative DNA-binding domain AM393_RS26865 0ea4adc1f57521a6aea2b4bf2b170faf 348 Pfam PF13411 MerR HTH family regulatory protein 5 71 1.5E-18 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM393_RS26865 0ea4adc1f57521a6aea2b4bf2b170faf 348 Gene3D G3DSA:1.10.1660.10 1 58 3.7E-21 T 28-03-2018 AM393_RS26865 0ea4adc1f57521a6aea2b4bf2b170faf 348 SMART SM00422 3 72 3.2E-28 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM393_RS26865 0ea4adc1f57521a6aea2b4bf2b170faf 348 Pfam PF07739 TipAS antibiotic-recognition domain 147 229 9.2E-8 T 28-03-2018 IPR012925 TipAS antibiotic-recognition domain AM393_RS26865 0ea4adc1f57521a6aea2b4bf2b170faf 348 ProSitePatterns PS00552 MerR-type HTH domain signature. 6 28 - T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM393_RS26865 0ea4adc1f57521a6aea2b4bf2b170faf 348 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 4 15 2.9E-10 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM393_RS26865 0ea4adc1f57521a6aea2b4bf2b170faf 348 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 39 59 2.9E-10 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM393_RS26865 0ea4adc1f57521a6aea2b4bf2b170faf 348 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 15 28 2.9E-10 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM393_RS02930 a7d938aa067105579f637672360ea8d8 436 Gene3D G3DSA:3.40.47.10 7 299 2.1E-43 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM393_RS02930 a7d938aa067105579f637672360ea8d8 436 ProSitePatterns PS00099 Thiolases active site. 417 430 - T 28-03-2018 IPR020610 Thiolase, active site GO:0008152|GO:0016747 AM393_RS02930 a7d938aa067105579f637672360ea8d8 436 Gene3D G3DSA:3.40.47.10 300 433 1.8E-24 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM393_RS02930 a7d938aa067105579f637672360ea8d8 436 PIRSF PIRSF000429 9 436 3.3E-124 T 28-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 AM393_RS02930 a7d938aa067105579f637672360ea8d8 436 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 95 113 - T 28-03-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 AM393_RS02930 a7d938aa067105579f637672360ea8d8 436 Pfam PF02803 Thiolase, C-terminal domain 296 434 2.1E-36 T 28-03-2018 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 AM393_RS02930 a7d938aa067105579f637672360ea8d8 436 TIGRFAM TIGR02446 FadI: acetyl-CoA C-acyltransferase FadI 8 436 7.1E-261 T 28-03-2018 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 AM393_RS02930 a7d938aa067105579f637672360ea8d8 436 Hamap MF_01618 3-ketoacyl-CoA thiolase [fadI]. 2 436 72.494 T 28-03-2018 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 AM393_RS02930 a7d938aa067105579f637672360ea8d8 436 SUPERFAMILY SSF53901 15 295 4.91E-61 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM393_RS02930 a7d938aa067105579f637672360ea8d8 436 ProSitePatterns PS00737 Thiolases signature 2. 382 398 - T 28-03-2018 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 AM393_RS02930 a7d938aa067105579f637672360ea8d8 436 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 17 434 5.6E-132 T 28-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 AM393_RS02930 a7d938aa067105579f637672360ea8d8 436 Pfam PF00108 Thiolase, N-terminal domain 15 288 1.0E-59 T 28-03-2018 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 AM393_RS02930 a7d938aa067105579f637672360ea8d8 436 SUPERFAMILY SSF53901 297 434 2.14E-32 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM393_RS16765 507137ee157020e4224e8e3124ae09b7 214 TIGRFAM TIGR01351 adk: adenylate kinase 2 213 1.9E-76 T 28-03-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 AM393_RS16765 507137ee157020e4224e8e3124ae09b7 214 Pfam PF05191 Adenylate kinase, active site lid 123 158 2.5E-16 T 28-03-2018 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 AM393_RS16765 507137ee157020e4224e8e3124ae09b7 214 Hamap MF_00235 Adenylate kinase [adk]. 1 214 53.585 T 28-03-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AM393_RS16765 507137ee157020e4224e8e3124ae09b7 214 Pfam PF00406 Adenylate kinase 5 186 1.0E-60 T 28-03-2018 AM393_RS16765 507137ee157020e4224e8e3124ae09b7 214 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 28-03-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AM393_RS16765 507137ee157020e4224e8e3124ae09b7 214 Gene3D G3DSA:3.40.50.300 1 214 3.7E-68 T 28-03-2018 AM393_RS16765 507137ee157020e4224e8e3124ae09b7 214 PRINTS PR00094 Adenylate kinase signature 173 187 9.7E-36 T 28-03-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AM393_RS16765 507137ee157020e4224e8e3124ae09b7 214 PRINTS PR00094 Adenylate kinase signature 81 97 9.7E-36 T 28-03-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AM393_RS16765 507137ee157020e4224e8e3124ae09b7 214 PRINTS PR00094 Adenylate kinase signature 4 17 9.7E-36 T 28-03-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AM393_RS16765 507137ee157020e4224e8e3124ae09b7 214 PRINTS PR00094 Adenylate kinase signature 32 46 9.7E-36 T 28-03-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AM393_RS16765 507137ee157020e4224e8e3124ae09b7 214 PRINTS PR00094 Adenylate kinase signature 156 171 9.7E-36 T 28-03-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AM393_RS16765 507137ee157020e4224e8e3124ae09b7 214 SUPERFAMILY SSF52540 1 212 4.7E-46 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS04045 e076c6bfc6c71b9bb170284ce6b52310 160 TIGRFAM TIGR00086 smpB: SsrA-binding protein 14 156 2.6E-53 T 28-03-2018 IPR000037 SsrA-binding protein GO:0003723 AM393_RS04045 e076c6bfc6c71b9bb170284ce6b52310 160 Hamap MF_00023 SsrA-binding protein [smpB]. 1 160 71.044 T 28-03-2018 IPR000037 SsrA-binding protein GO:0003723 AM393_RS04045 e076c6bfc6c71b9bb170284ce6b52310 160 SUPERFAMILY SSF74982 8 138 3.79E-50 T 28-03-2018 IPR023620 Small protein B AM393_RS04045 e076c6bfc6c71b9bb170284ce6b52310 160 ProSitePatterns PS01317 SsrA-binding protein. 32 44 - T 28-03-2018 IPR020081 SsrA-binding protein, conserved site AM393_RS04045 e076c6bfc6c71b9bb170284ce6b52310 160 Pfam PF01668 SmpB protein 14 157 8.5E-56 T 28-03-2018 IPR000037 SsrA-binding protein GO:0003723 AM393_RS04045 e076c6bfc6c71b9bb170284ce6b52310 160 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 14 138 5.0E-67 T 28-03-2018 IPR000037 SsrA-binding protein GO:0003723 AM393_RS04045 e076c6bfc6c71b9bb170284ce6b52310 160 Gene3D G3DSA:2.40.280.10 14 133 3.2E-45 T 28-03-2018 IPR023620 Small protein B AM393_RS21315 d06b0e7f5dd14ee8209441d4029ce18b 252 SMART SM01134 74 234 2.3E-56 T 28-03-2018 AM393_RS21315 d06b0e7f5dd14ee8209441d4029ce18b 252 SMART SM00420 6 58 7.4E-23 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM393_RS21315 d06b0e7f5dd14ee8209441d4029ce18b 252 Gene3D G3DSA:3.40.50.1360 77 234 5.6E-34 T 28-03-2018 AM393_RS21315 d06b0e7f5dd14ee8209441d4029ce18b 252 Gene3D G3DSA:1.10.10.10 4 76 1.3E-10 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS21315 d06b0e7f5dd14ee8209441d4029ce18b 252 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 28-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 AM393_RS21315 d06b0e7f5dd14ee8209441d4029ce18b 252 Pfam PF08220 DeoR-like helix-turn-helix domain 6 61 6.8E-17 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM393_RS21315 d06b0e7f5dd14ee8209441d4029ce18b 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 8.4E-9 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM393_RS21315 d06b0e7f5dd14ee8209441d4029ce18b 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 8.4E-9 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM393_RS21315 d06b0e7f5dd14ee8209441d4029ce18b 252 SUPERFAMILY SSF46785 4 71 1.08E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS21315 d06b0e7f5dd14ee8209441d4029ce18b 252 Pfam PF00455 DeoR C terminal sensor domain 78 232 3.8E-47 T 28-03-2018 IPR014036 DeoR C-terminal sensor domain AM393_RS21315 d06b0e7f5dd14ee8209441d4029ce18b 252 SUPERFAMILY SSF100950 76 234 1.78E-29 T 28-03-2018 AM393_RS25985 a144e8a580a74f036d45c7c08c9dbddd 76 TIGRFAM TIGR03141 cytochro_ccmD: heme exporter protein CcmD 12 57 1.4E-16 T 28-03-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 AM393_RS25985 a144e8a580a74f036d45c7c08c9dbddd 76 Pfam PF04995 Heme exporter protein D (CcmD) 15 58 2.9E-15 T 28-03-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 AM393_RS25285 c9691316273b230a73c9f7b23e0789d6 551 Hamap MF_01068 Glucans biosynthesis protein D [mdoD]. 1 544 59.728 T 28-03-2018 IPR023724 Glucan biosynthesis, MdoD AM393_RS25285 c9691316273b230a73c9f7b23e0789d6 551 Pfam PF04349 Periplasmic glucan biosynthesis protein, MdoG 45 534 5.2E-181 T 28-03-2018 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal GO:0016051|GO:0042597 AM393_RS25285 c9691316273b230a73c9f7b23e0789d6 551 PIRSF PIRSF006281 1 538 1.9E-202 T 28-03-2018 IPR014438 Glucan biosynthesis, periplasmic, MdoG/D AM393_RS25285 c9691316273b230a73c9f7b23e0789d6 551 Gene3D G3DSA:2.70.98.10 45 419 2.0E-156 T 28-03-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 AM393_RS25285 c9691316273b230a73c9f7b23e0789d6 551 SUPERFAMILY SSF74650 45 422 1.13E-146 T 28-03-2018 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 AM393_RS25285 c9691316273b230a73c9f7b23e0789d6 551 SUPERFAMILY SSF81296 423 537 3.22E-27 T 28-03-2018 IPR014756 Immunoglobulin E-set AM393_RS25285 c9691316273b230a73c9f7b23e0789d6 551 Gene3D G3DSA:2.60.40.10 423 538 3.1E-26 T 28-03-2018 IPR013783 Immunoglobulin-like fold AM393_RS09460 6ab47242040c6aa3267af1b9112295c8 392 Gene3D G3DSA:3.40.50.2300 1 108 1.0E-8 T 28-03-2018 AM393_RS09460 6ab47242040c6aa3267af1b9112295c8 392 SUPERFAMILY SSF53822 10 299 1.33E-46 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AM393_RS09460 6ab47242040c6aa3267af1b9112295c8 392 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 338 380 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM393_RS09460 6ab47242040c6aa3267af1b9112295c8 392 SUPERFAMILY SSF46689 284 331 8.51E-5 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS09460 6ab47242040c6aa3267af1b9112295c8 392 Gene3D G3DSA:1.10.10.60 341 389 4.5E-13 T 28-03-2018 AM393_RS09460 6ab47242040c6aa3267af1b9112295c8 392 SMART SM00342 301 384 5.2E-31 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM393_RS09460 6ab47242040c6aa3267af1b9112295c8 392 Gene3D G3DSA:3.40.50.2300 109 280 2.5E-30 T 28-03-2018 AM393_RS09460 6ab47242040c6aa3267af1b9112295c8 392 Pfam PF12833 Helix-turn-helix domain 309 386 3.0E-19 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM393_RS09460 6ab47242040c6aa3267af1b9112295c8 392 Pfam PF13377 Periplasmic binding protein-like domain 113 277 6.7E-36 T 28-03-2018 AM393_RS09460 6ab47242040c6aa3267af1b9112295c8 392 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 353 368 3.6E-6 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM393_RS09460 6ab47242040c6aa3267af1b9112295c8 392 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 368 384 3.6E-6 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM393_RS09460 6ab47242040c6aa3267af1b9112295c8 392 SUPERFAMILY SSF46689 338 387 2.93E-13 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS09460 6ab47242040c6aa3267af1b9112295c8 392 Gene3D G3DSA:1.10.10.60 281 340 6.0E-8 T 28-03-2018 AM393_RS06840 5c28f67334c9b039e7ec6cd372a626ad 477 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 332 473 1.0E-64 T 28-03-2018 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167 AM393_RS06840 5c28f67334c9b039e7ec6cd372a626ad 477 SUPERFAMILY SSF52374 340 471 8.45E-22 T 28-03-2018 AM393_RS06840 5c28f67334c9b039e7ec6cd372a626ad 477 Hamap MF_01603 Bifunctional protein HldE [hldE]. 4 474 43.698 T 28-03-2018 IPR023030 Bifunctional protein HldE GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167 AM393_RS06840 5c28f67334c9b039e7ec6cd372a626ad 477 Gene3D G3DSA:3.40.50.620 318 477 1.3E-26 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM393_RS06840 5c28f67334c9b039e7ec6cd372a626ad 477 SUPERFAMILY SSF53613 12 310 2.65E-59 T 28-03-2018 IPR029056 Ribokinase-like AM393_RS06840 5c28f67334c9b039e7ec6cd372a626ad 477 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 51 74 - T 28-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AM393_RS06840 5c28f67334c9b039e7ec6cd372a626ad 477 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 5 312 1.0E-128 T 28-03-2018 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167 AM393_RS06840 5c28f67334c9b039e7ec6cd372a626ad 477 Pfam PF00294 pfkB family carbohydrate kinase 13 305 5.0E-55 T 28-03-2018 IPR011611 Carbohydrate kinase PfkB AM393_RS06840 5c28f67334c9b039e7ec6cd372a626ad 477 Pfam PF01467 Cytidylyltransferase-like 345 435 9.2E-15 T 28-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AM393_RS06840 5c28f67334c9b039e7ec6cd372a626ad 477 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 342 408 5.4E-18 T 28-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AM393_RS06840 5c28f67334c9b039e7ec6cd372a626ad 477 Gene3D G3DSA:3.40.1190.20 2 310 8.4E-60 T 28-03-2018 IPR029056 Ribokinase-like AM393_RS28935 551f2b6883bb4fadd39ca5f3bb4f4586 291 ProSitePatterns PS00146 Beta-lactamase class-A active site. 69 84 - T 28-03-2018 IPR023650 Beta-lactamase, class-A active site KEGG: 00311+3.5.2.6 AM393_RS28935 551f2b6883bb4fadd39ca5f3bb4f4586 291 PRINTS PR00118 Beta-lactamase class A signature 207 222 6.5E-72 T 28-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 AM393_RS28935 551f2b6883bb4fadd39ca5f3bb4f4586 291 PRINTS PR00118 Beta-lactamase class A signature 145 169 6.5E-72 T 28-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 AM393_RS28935 551f2b6883bb4fadd39ca5f3bb4f4586 291 PRINTS PR00118 Beta-lactamase class A signature 36 60 6.5E-72 T 28-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 AM393_RS28935 551f2b6883bb4fadd39ca5f3bb4f4586 291 PRINTS PR00118 Beta-lactamase class A signature 224 239 6.5E-72 T 28-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 AM393_RS28935 551f2b6883bb4fadd39ca5f3bb4f4586 291 PRINTS PR00118 Beta-lactamase class A signature 109 134 6.5E-72 T 28-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 AM393_RS28935 551f2b6883bb4fadd39ca5f3bb4f4586 291 PRINTS PR00118 Beta-lactamase class A signature 67 84 6.5E-72 T 28-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 AM393_RS28935 551f2b6883bb4fadd39ca5f3bb4f4586 291 PRINTS PR00118 Beta-lactamase class A signature 171 196 6.5E-72 T 28-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 AM393_RS28935 551f2b6883bb4fadd39ca5f3bb4f4586 291 SUPERFAMILY SSF56601 32 289 3.48E-81 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AM393_RS28935 551f2b6883bb4fadd39ca5f3bb4f4586 291 Gene3D G3DSA:3.40.710.10 30 290 6.3E-36 T 28-03-2018 AM393_RS28935 551f2b6883bb4fadd39ca5f3bb4f4586 291 Pfam PF13354 Beta-lactamase enzyme family 57 263 1.6E-41 T 28-03-2018 AM393_RS12800 af70912f08f3f98e1efd0d76ee4eafd7 316 Gene3D G3DSA:3.40.50.300 9 203 2.0E-61 T 28-03-2018 AM393_RS12800 af70912f08f3f98e1efd0d76ee4eafd7 316 Gene3D G3DSA:1.10.287.890 207 289 9.4E-25 T 28-03-2018 AM393_RS12800 af70912f08f3f98e1efd0d76ee4eafd7 316 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 12 309 30.095 T 28-03-2018 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 AM393_RS12800 af70912f08f3f98e1efd0d76ee4eafd7 316 SUPERFAMILY SSF52540 13 157 1.23E-17 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS12800 af70912f08f3f98e1efd0d76ee4eafd7 316 Pfam PF01715 IPP transferase 46 290 5.2E-87 T 28-03-2018 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 AM393_RS12800 af70912f08f3f98e1efd0d76ee4eafd7 316 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 12 300 6.0E-123 T 28-03-2018 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 AM393_RS12980 3d7aff5d34019bb203b7051699fc24a4 123 SUPERFAMILY SSF46785 14 118 2.69E-32 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS12980 3d7aff5d34019bb203b7051699fc24a4 123 Pfam PF01638 HxlR-like helix-turn-helix 29 115 4.6E-31 T 28-03-2018 IPR002577 Helix-turn-helix, HxlR type AM393_RS12980 3d7aff5d34019bb203b7051699fc24a4 123 Gene3D G3DSA:1.10.10.10 2 123 3.5E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS11240 0098b82582d211b6edfe65d5f2c2dde1 673 TIGRFAM TIGR01074 rep: ATP-dependent DNA helicase Rep 2 667 0.0 T 28-03-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 AM393_RS11240 0098b82582d211b6edfe65d5f2c2dde1 673 Gene3D G3DSA:3.40.50.300 276 376 1.9E-21 T 28-03-2018 AM393_RS11240 0098b82582d211b6edfe65d5f2c2dde1 673 Gene3D G3DSA:1.10.486.10 377 551 1.3E-37 T 28-03-2018 AM393_RS11240 0098b82582d211b6edfe65d5f2c2dde1 673 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 1 668 40.987 T 28-03-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 AM393_RS11240 0098b82582d211b6edfe65d5f2c2dde1 673 Pfam PF13361 UvrD-like helicase C-terminal domain 271 613 8.2E-72 T 28-03-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 AM393_RS11240 0098b82582d211b6edfe65d5f2c2dde1 673 Pfam PF00580 UvrD/REP helicase N-terminal domain 3 265 4.6E-73 T 28-03-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 AM393_RS11240 0098b82582d211b6edfe65d5f2c2dde1 673 SUPERFAMILY SSF52540 2 636 4.24E-163 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS11240 0098b82582d211b6edfe65d5f2c2dde1 673 Gene3D G3DSA:3.40.50.300 136 275 3.1E-28 T 28-03-2018 AM393_RS11240 0098b82582d211b6edfe65d5f2c2dde1 673 Gene3D G3DSA:3.40.50.300 1 135 2.7E-24 T 28-03-2018 AM393_RS09675 d326011f48e34ab702617a94c3e6df1c 424 Gene3D G3DSA:3.40.50.2000 43 219 1.0E-4 T 28-03-2018 AM393_RS09675 d326011f48e34ab702617a94c3e6df1c 424 Gene3D G3DSA:3.40.50.2000 220 403 8.1E-15 T 28-03-2018 AM393_RS09675 d326011f48e34ab702617a94c3e6df1c 424 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 32 210 2.6E-66 T 28-03-2018 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 AM393_RS09675 d326011f48e34ab702617a94c3e6df1c 424 SUPERFAMILY SSF53756 56 418 1.21E-18 T 28-03-2018 AM393_RS09675 d326011f48e34ab702617a94c3e6df1c 424 Pfam PF00534 Glycosyl transferases group 1 247 397 7.4E-11 T 28-03-2018 IPR001296 Glycosyl transferase, family 1 AM393_RS01530 2562d5874abd2d335ee03c8c8d349968 636 Gene3D G3DSA:3.20.20.450 388 636 9.9E-100 T 28-03-2018 IPR001633 EAL domain AM393_RS01530 2562d5874abd2d335ee03c8c8d349968 636 Pfam PF00990 Diguanylate cyclase, GGDEF domain 226 379 4.1E-39 T 28-03-2018 IPR000160 GGDEF domain AM393_RS01530 2562d5874abd2d335ee03c8c8d349968 636 SUPERFAMILY SSF55073 231 387 5.57E-41 T 28-03-2018 IPR029787 Nucleotide cyclase AM393_RS01530 2562d5874abd2d335ee03c8c8d349968 636 SUPERFAMILY SSF141868 400 635 1.31E-91 T 28-03-2018 IPR001633 EAL domain AM393_RS01530 2562d5874abd2d335ee03c8c8d349968 636 Gene3D G3DSA:3.30.70.270 219 387 2.0E-48 T 28-03-2018 AM393_RS01530 2562d5874abd2d335ee03c8c8d349968 636 SMART SM00267 215 385 5.3E-48 T 28-03-2018 IPR000160 GGDEF domain AM393_RS01530 2562d5874abd2d335ee03c8c8d349968 636 SMART SM00052 395 636 2.3E-107 T 28-03-2018 IPR001633 EAL domain AM393_RS01530 2562d5874abd2d335ee03c8c8d349968 636 Pfam PF00563 EAL domain 401 632 1.3E-78 T 28-03-2018 IPR001633 EAL domain AM393_RS01530 2562d5874abd2d335ee03c8c8d349968 636 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 222 384 3.0E-36 T 28-03-2018 IPR000160 GGDEF domain AM393_RS14265 f35bd963a423234a8acb487d85402f16 555 SMART SM00382 348 522 6.0E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS14265 f35bd963a423234a8acb487d85402f16 555 SMART SM00382 31 236 3.0E-8 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS14265 f35bd963a423234a8acb487d85402f16 555 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS14265 f35bd963a423234a8acb487d85402f16 555 Gene3D G3DSA:3.40.50.300 290 551 1.3E-56 T 28-03-2018 AM393_RS14265 f35bd963a423234a8acb487d85402f16 555 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 2 553 7.0E-295 T 28-03-2018 IPR022374 ABC transporter, ATP-binding protein, ChvD AM393_RS14265 f35bd963a423234a8acb487d85402f16 555 SUPERFAMILY SSF52540 11 243 6.19E-49 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS14265 f35bd963a423234a8acb487d85402f16 555 Pfam PF12848 ABC transporter 230 306 3.4E-12 T 28-03-2018 IPR032781 ABC-transporter extension domain AM393_RS14265 f35bd963a423234a8acb487d85402f16 555 Gene3D G3DSA:3.40.50.300 12 289 2.0E-56 T 28-03-2018 AM393_RS14265 f35bd963a423234a8acb487d85402f16 555 Pfam PF00005 ABC transporter 22 191 2.5E-32 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS14265 f35bd963a423234a8acb487d85402f16 555 Pfam PF00005 ABC transporter 340 473 5.2E-24 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS14265 f35bd963a423234a8acb487d85402f16 555 SUPERFAMILY SSF52540 302 526 2.37E-47 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS06730 ef34aa3393bdcf8855913832ad3f3f00 470 Gene3D G3DSA:2.60.40.420 28 164 1.9E-18 T 28-03-2018 IPR008972 Cupredoxin AM393_RS06730 ef34aa3393bdcf8855913832ad3f3f00 470 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 27 2.7E-4 T 28-03-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AM393_RS06730 ef34aa3393bdcf8855913832ad3f3f00 470 Gene3D G3DSA:2.60.40.420 168 298 1.0E-23 T 28-03-2018 IPR008972 Cupredoxin AM393_RS06730 ef34aa3393bdcf8855913832ad3f3f00 470 Pfam PF07731 Multicopper oxidase 359 468 1.4E-12 T 28-03-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 AM393_RS06730 ef34aa3393bdcf8855913832ad3f3f00 470 Hamap MF_00915 Cell division protein FtsP [ftsP]. 1 467 57.72 T 28-03-2018 IPR026589 Cell division protein FtsP GO:0043093 AM393_RS06730 ef34aa3393bdcf8855913832ad3f3f00 470 SUPERFAMILY SSF49503 3 165 2.22E-21 T 28-03-2018 IPR008972 Cupredoxin AM393_RS06730 ef34aa3393bdcf8855913832ad3f3f00 470 Gene3D G3DSA:2.60.40.420 346 470 1.6E-15 T 28-03-2018 IPR008972 Cupredoxin AM393_RS06730 ef34aa3393bdcf8855913832ad3f3f00 470 SUPERFAMILY SSF49503 314 466 9.81E-19 T 28-03-2018 IPR008972 Cupredoxin AM393_RS06730 ef34aa3393bdcf8855913832ad3f3f00 470 Pfam PF07732 Multicopper oxidase 52 166 4.5E-23 T 28-03-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 AM393_RS06730 ef34aa3393bdcf8855913832ad3f3f00 470 SUPERFAMILY SSF49503 172 310 2.49E-28 T 28-03-2018 IPR008972 Cupredoxin AM393_RS21700 d0cbbfdea87f56b2bbc4eb3b7ed3b4ba 865 SUPERFAMILY SSF57783 702 743 2.3E-7 T 28-03-2018 AM393_RS21700 d0cbbfdea87f56b2bbc4eb3b7ed3b4ba 865 SUPERFAMILY SSF57783 809 864 3.23E-23 T 28-03-2018 AM393_RS21700 d0cbbfdea87f56b2bbc4eb3b7ed3b4ba 865 Gene3D G3DSA:1.10.460.10 164 346 1.6E-45 T 28-03-2018 AM393_RS21700 d0cbbfdea87f56b2bbc4eb3b7ed3b4ba 865 SMART SM00437 272 527 1.1E-124 T 28-03-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 AM393_RS21700 d0cbbfdea87f56b2bbc4eb3b7ed3b4ba 865 Gene3D G3DSA:2.20.25.10 809 863 6.5E-31 T 28-03-2018 AM393_RS21700 d0cbbfdea87f56b2bbc4eb3b7ed3b4ba 865 Pfam PF08272 Topoisomerase I zinc-ribbon-like 758 793 2.9E-12 T 28-03-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 AM393_RS21700 d0cbbfdea87f56b2bbc4eb3b7ed3b4ba 865 Pfam PF08272 Topoisomerase I zinc-ribbon-like 824 863 1.9E-22 T 28-03-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 AM393_RS21700 d0cbbfdea87f56b2bbc4eb3b7ed3b4ba 865 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 635 1.1E-262 T 28-03-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 AM393_RS21700 d0cbbfdea87f56b2bbc4eb3b7ed3b4ba 865 Gene3D G3DSA:2.70.20.10 347 473 3.4E-38 T 28-03-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 AM393_RS21700 d0cbbfdea87f56b2bbc4eb3b7ed3b4ba 865 SMART SM00493 3 132 9.8E-34 T 28-03-2018 IPR006171 TOPRIM domain AM393_RS21700 d0cbbfdea87f56b2bbc4eb3b7ed3b4ba 865 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 314 323 5.9E-37 T 28-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AM393_RS21700 d0cbbfdea87f56b2bbc4eb3b7ed3b4ba 865 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 106 119 5.9E-37 T 28-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AM393_RS21700 d0cbbfdea87f56b2bbc4eb3b7ed3b4ba 865 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 490 504 5.9E-37 T 28-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AM393_RS21700 d0cbbfdea87f56b2bbc4eb3b7ed3b4ba 865 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 390 406 5.9E-37 T 28-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AM393_RS21700 d0cbbfdea87f56b2bbc4eb3b7ed3b4ba 865 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 191 209 5.9E-37 T 28-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AM393_RS21700 d0cbbfdea87f56b2bbc4eb3b7ed3b4ba 865 Pfam PF01131 DNA topoisomerase 157 564 4.3E-128 T 28-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AM393_RS21700 d0cbbfdea87f56b2bbc4eb3b7ed3b4ba 865 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 708 745 2.5E-11 T 28-03-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 AM393_RS21700 d0cbbfdea87f56b2bbc4eb3b7ed3b4ba 865 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 597 622 7.4E-6 T 28-03-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 AM393_RS21700 d0cbbfdea87f56b2bbc4eb3b7ed3b4ba 865 Gene3D G3DSA:3.30.65.10 746 807 1.2E-9 T 28-03-2018 AM393_RS21700 d0cbbfdea87f56b2bbc4eb3b7ed3b4ba 865 Gene3D G3DSA:3.30.65.10 700 745 9.7E-10 T 28-03-2018 AM393_RS21700 d0cbbfdea87f56b2bbc4eb3b7ed3b4ba 865 Gene3D G3DSA:3.30.65.10 577 645 2.1E-11 T 28-03-2018 AM393_RS21700 d0cbbfdea87f56b2bbc4eb3b7ed3b4ba 865 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 723 54.817 T 28-03-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 AM393_RS21700 d0cbbfdea87f56b2bbc4eb3b7ed3b4ba 865 SUPERFAMILY SSF57783 744 807 1.87E-19 T 28-03-2018 AM393_RS21700 d0cbbfdea87f56b2bbc4eb3b7ed3b4ba 865 SMART SM00436 133 221 4.0E-49 T 28-03-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 AM393_RS21700 d0cbbfdea87f56b2bbc4eb3b7ed3b4ba 865 Pfam PF01751 Toprim domain 5 142 4.4E-34 T 28-03-2018 IPR006171 TOPRIM domain AM393_RS21700 d0cbbfdea87f56b2bbc4eb3b7ed3b4ba 865 Gene3D G3DSA:3.40.50.140 1 163 2.8E-51 T 28-03-2018 AM393_RS21700 d0cbbfdea87f56b2bbc4eb3b7ed3b4ba 865 SUPERFAMILY SSF56712 3 609 3.79E-205 T 28-03-2018 IPR023405 DNA topoisomerase, type IA, core domain AM393_RS21700 d0cbbfdea87f56b2bbc4eb3b7ed3b4ba 865 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 309 323 - T 28-03-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 AM393_RS15130 7eb627de0991c40e61c888823f828ef6 178 Gene3D G3DSA:3.90.1140.10 1 178 1.3E-30 T 28-03-2018 AM393_RS15130 7eb627de0991c40e61c888823f828ef6 178 Pfam PF02834 LigT like Phosphoesterase 92 166 1.5E-7 T 28-03-2018 IPR014051 Phosphoesterase, HXTX AM393_RS15130 7eb627de0991c40e61c888823f828ef6 178 Pfam PF02834 LigT like Phosphoesterase 11 89 3.0E-13 T 28-03-2018 IPR014051 Phosphoesterase, HXTX AM393_RS15130 7eb627de0991c40e61c888823f828ef6 178 Hamap MF_01940 RNA 2',3'-cyclic phosphodiesterase [thpR]. 5 174 22.153 T 28-03-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 AM393_RS15130 7eb627de0991c40e61c888823f828ef6 178 TIGRFAM TIGR02258 2_5_ligase: 2'-5' RNA ligase 6 173 1.1E-39 T 28-03-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 AM393_RS15130 7eb627de0991c40e61c888823f828ef6 178 SUPERFAMILY SSF55144 5 175 7.85E-45 T 28-03-2018 IPR009097 Cyclic phosphodiesterase AM393_RS22525 fa7173a3d9745db79919b241eb2b8d1b 354 Gene3D G3DSA:3.30.360.10 137 353 7.4E-42 T 28-03-2018 AM393_RS22525 fa7173a3d9745db79919b241eb2b8d1b 354 Gene3D G3DSA:3.40.50.720 1 136 6.8E-42 T 28-03-2018 AM393_RS22525 fa7173a3d9745db79919b241eb2b8d1b 354 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 6 122 5.5E-25 T 28-03-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 AM393_RS22525 fa7173a3d9745db79919b241eb2b8d1b 354 SUPERFAMILY SSF51735 2 199 2.14E-51 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS22525 fa7173a3d9745db79919b241eb2b8d1b 354 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 135 240 2.5E-14 T 28-03-2018 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 AM393_RS08505 4970fdfe7b5aff1bc563ab72936c94d2 847 PRINTS PR00397 Sirohaem Fe-binding site signature 679 697 7.9E-6 T 28-03-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM393_RS08505 4970fdfe7b5aff1bc563ab72936c94d2 847 PRINTS PR00397 Sirohaem Fe-binding site signature 636 654 7.9E-6 T 28-03-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM393_RS08505 4970fdfe7b5aff1bc563ab72936c94d2 847 Gene3D G3DSA:3.50.50.60 1 120 5.1E-12 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS08505 4970fdfe7b5aff1bc563ab72936c94d2 847 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 633 766 3.5E-15 T 28-03-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM393_RS08505 4970fdfe7b5aff1bc563ab72936c94d2 847 SUPERFAMILY SSF51905 2 189 2.18E-40 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS08505 4970fdfe7b5aff1bc563ab72936c94d2 847 Gene3D G3DSA:3.50.50.60 254 324 4.4E-9 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS08505 4970fdfe7b5aff1bc563ab72936c94d2 847 SUPERFAMILY SSF51905 144 310 1.3E-28 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS08505 4970fdfe7b5aff1bc563ab72936c94d2 847 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 283 2.4E-15 T 28-03-2018 AM393_RS08505 4970fdfe7b5aff1bc563ab72936c94d2 847 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 2.4E-15 T 28-03-2018 AM393_RS08505 4970fdfe7b5aff1bc563ab72936c94d2 847 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 2.4E-15 T 28-03-2018 AM393_RS08505 4970fdfe7b5aff1bc563ab72936c94d2 847 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 2.4E-15 T 28-03-2018 AM393_RS08505 4970fdfe7b5aff1bc563ab72936c94d2 847 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 234 250 2.4E-15 T 28-03-2018 AM393_RS08505 4970fdfe7b5aff1bc563ab72936c94d2 847 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 560 622 1.8E-10 T 28-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM393_RS08505 4970fdfe7b5aff1bc563ab72936c94d2 847 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 6 801 0.0 T 28-03-2018 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 AM393_RS08505 4970fdfe7b5aff1bc563ab72936c94d2 847 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 276 283 3.0E-11 T 28-03-2018 AM393_RS08505 4970fdfe7b5aff1bc563ab72936c94d2 847 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 235 249 3.0E-11 T 28-03-2018 AM393_RS08505 4970fdfe7b5aff1bc563ab72936c94d2 847 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 172 3.0E-11 T 28-03-2018 AM393_RS08505 4970fdfe7b5aff1bc563ab72936c94d2 847 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 105 114 3.0E-11 T 28-03-2018 AM393_RS08505 4970fdfe7b5aff1bc563ab72936c94d2 847 Gene3D G3DSA:3.30.413.10 631 816 4.7E-37 T 28-03-2018 AM393_RS08505 4970fdfe7b5aff1bc563ab72936c94d2 847 PIRSF PIRSF037149 1 835 0.0 T 28-03-2018 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 AM393_RS08505 4970fdfe7b5aff1bc563ab72936c94d2 847 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 679 695 - T 28-03-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM393_RS08505 4970fdfe7b5aff1bc563ab72936c94d2 847 Pfam PF04324 BFD-like [2Fe-2S] binding domain 424 471 1.2E-14 T 28-03-2018 IPR007419 BFD-like [2Fe-2S]-binding domain AM393_RS08505 4970fdfe7b5aff1bc563ab72936c94d2 847 SUPERFAMILY SSF55124 502 627 8.58E-31 T 28-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM393_RS08505 4970fdfe7b5aff1bc563ab72936c94d2 847 Gene3D G3DSA:3.90.480.10 447 629 7.7E-7 T 28-03-2018 AM393_RS08505 4970fdfe7b5aff1bc563ab72936c94d2 847 SUPERFAMILY SSF56014 633 808 1.44E-46 T 28-03-2018 AM393_RS08505 4970fdfe7b5aff1bc563ab72936c94d2 847 Gene3D G3DSA:3.50.50.60 121 253 1.5E-26 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS08505 4970fdfe7b5aff1bc563ab72936c94d2 847 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 292 6.8E-53 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS26730 4d6c3b89f5192de9dd4c560b34d8777c 1247 Pfam PF00384 Molybdopterin oxidoreductase 108 833 3.4E-189 T 28-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM393_RS26730 4d6c3b89f5192de9dd4c560b34d8777c 1247 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 777 794 - T 28-03-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 AM393_RS26730 4d6c3b89f5192de9dd4c560b34d8777c 1247 Gene3D G3DSA:4.10.1200.10 1 26 6.6E-15 T 28-03-2018 AM393_RS26730 4d6c3b89f5192de9dd4c560b34d8777c 1247 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 48 66 - T 28-03-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 AM393_RS26730 4d6c3b89f5192de9dd4c560b34d8777c 1247 Gene3D G3DSA:3.40.228.10 225 660 1.5E-103 T 28-03-2018 AM393_RS26730 4d6c3b89f5192de9dd4c560b34d8777c 1247 Gene3D G3DSA:3.40.50.740 108 213 1.7E-4 T 28-03-2018 AM393_RS26730 4d6c3b89f5192de9dd4c560b34d8777c 1247 Pfam PF14710 Respiratory nitrate reductase alpha N-terminal 3 40 8.2E-17 T 28-03-2018 IPR028189 Nitrate reductase, alpha subunit, N-terminal KEGG: 00910+1.7.99.4 AM393_RS26730 4d6c3b89f5192de9dd4c560b34d8777c 1247 Gene3D G3DSA:2.40.40.20 1048 1238 1.1E-47 T 28-03-2018 AM393_RS26730 4d6c3b89f5192de9dd4c560b34d8777c 1247 Gene3D G3DSA:3.30.2070.10 795 835 4.0E-6 T 28-03-2018 AM393_RS26730 4d6c3b89f5192de9dd4c560b34d8777c 1247 SUPERFAMILY SSF50692 1082 1235 4.29E-48 T 28-03-2018 IPR009010 Aspartate decarboxylase-like domain AM393_RS26730 4d6c3b89f5192de9dd4c560b34d8777c 1247 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 1125 1152 - T 28-03-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 AM393_RS26730 4d6c3b89f5192de9dd4c560b34d8777c 1247 Pfam PF01568 Molydopterin dinucleotide binding domain 1088 1202 1.8E-22 T 28-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 AM393_RS26730 4d6c3b89f5192de9dd4c560b34d8777c 1247 SUPERFAMILY SSF53706 4 1070 0.0 T 28-03-2018 AM393_RS26730 4d6c3b89f5192de9dd4c560b34d8777c 1247 SMART SM00926 43 105 6.6E-8 T 28-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM393_RS26730 4d6c3b89f5192de9dd4c560b34d8777c 1247 Gene3D G3DSA:2.20.25.90 55 98 1.3E-28 T 28-03-2018 AM393_RS26730 4d6c3b89f5192de9dd4c560b34d8777c 1247 TIGRFAM TIGR01580 narG: nitrate reductase, alpha subunit 2 1235 0.0 T 28-03-2018 IPR006468 Nitrate reductase, alpha subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.99.4 AM393_RS23765 ddf4fae6ad982be236e35effd50f0aa8 108 Gene3D G3DSA:2.60.40.180 1 108 4.6E-30 T 28-03-2018 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 AM393_RS23765 ddf4fae6ad982be236e35effd50f0aa8 108 Pfam PF00576 HIUase/Transthyretin family 4 107 3.2E-24 T 28-03-2018 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 AM393_RS23765 ddf4fae6ad982be236e35effd50f0aa8 108 ProSitePatterns PS00768 Transthyretin signature 1. 7 22 - T 28-03-2018 IPR023418 Transthyretin, thyroxine binding site Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 AM393_RS23765 ddf4fae6ad982be236e35effd50f0aa8 108 TIGRFAM TIGR02962 hdxy_isourate: hydroxyisourate hydrolase 2 108 1.2E-26 T 28-03-2018 IPR014306 Hydroxyisourate hydrolase GO:0006144|GO:0033971 KEGG: 00230+3.5.2.17|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 AM393_RS23765 ddf4fae6ad982be236e35effd50f0aa8 108 SUPERFAMILY SSF49472 1 108 1.2E-28 T 28-03-2018 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 AM393_RS20505 65c02fc1c9dbd148b2eeb6a439277dcc 375 Pfam PF13473 Cupredoxin-like domain 13 115 1.6E-24 T 28-03-2018 IPR028096 EfeO-type cupredoxin-like domain AM393_RS20505 65c02fc1c9dbd148b2eeb6a439277dcc 375 SUPERFAMILY SSF49503 14 115 1.03E-5 T 28-03-2018 IPR008972 Cupredoxin AM393_RS20505 65c02fc1c9dbd148b2eeb6a439277dcc 375 Gene3D G3DSA:3.90.20.10 154 370 3.7E-5 T 28-03-2018 AM393_RS20505 65c02fc1c9dbd148b2eeb6a439277dcc 375 Pfam PF09375 Imelysin 135 367 3.7E-44 T 28-03-2018 IPR018976 Peptidase M75, Imelysin AM393_RS11070 e86b7e170911563d058463d796d4a97f 883 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 134 145 - T 28-03-2018 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AM393_RS11070 e86b7e170911563d058463d796d4a97f 883 Pfam PF00311 Phosphoenolpyruvate carboxylase 129 883 3.5E-294 T 28-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AM393_RS11070 e86b7e170911563d058463d796d4a97f 883 SUPERFAMILY SSF51621 6 883 0.0 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AM393_RS11070 e86b7e170911563d058463d796d4a97f 883 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 709 735 2.3E-68 T 28-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AM393_RS11070 e86b7e170911563d058463d796d4a97f 883 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 577 606 2.3E-68 T 28-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AM393_RS11070 e86b7e170911563d058463d796d4a97f 883 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 245 260 2.3E-68 T 28-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AM393_RS11070 e86b7e170911563d058463d796d4a97f 883 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 386 406 2.3E-68 T 28-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AM393_RS11070 e86b7e170911563d058463d796d4a97f 883 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 186 202 2.3E-68 T 28-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AM393_RS11070 e86b7e170911563d058463d796d4a97f 883 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 535 555 2.3E-68 T 28-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AM393_RS11070 e86b7e170911563d058463d796d4a97f 883 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 133 146 2.3E-68 T 28-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AM393_RS11070 e86b7e170911563d058463d796d4a97f 883 Gene3D G3DSA:3.20.20.60 382 594 6.1E-5 T 28-03-2018 AM393_RS11070 e86b7e170911563d058463d796d4a97f 883 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 1 883 18.36 T 28-03-2018 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AM393_RS11070 e86b7e170911563d058463d796d4a97f 883 Gene3D G3DSA:1.20.1440.90 274 381 5.3E-26 T 28-03-2018 AM393_RS11070 e86b7e170911563d058463d796d4a97f 883 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 537 549 - T 28-03-2018 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AM393_RS02250 6ba74aef7a9af3b103f722acf90bb72b 393 TIGRFAM TIGR00899 2A0120: sugar efflux transporter 19 392 1.1E-187 T 28-03-2018 IPR004750 Sugar efflux GO:0008643|GO:0015542|GO:0016021 AM393_RS02250 6ba74aef7a9af3b103f722acf90bb72b 393 SUPERFAMILY SSF103473 18 390 4.19E-50 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS02250 6ba74aef7a9af3b103f722acf90bb72b 393 Pfam PF07690 Major Facilitator Superfamily 21 346 2.1E-35 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS02250 6ba74aef7a9af3b103f722acf90bb72b 393 Gene3D G3DSA:1.20.1250.20 14 204 9.6E-20 T 28-03-2018 AM393_RS02250 6ba74aef7a9af3b103f722acf90bb72b 393 Gene3D G3DSA:1.20.1250.20 213 392 4.5E-23 T 28-03-2018 AM393_RS07610 b05b3d9bc47afc0e31697ddef52ffa71 419 Gene3D G3DSA:3.65.10.10 21 219 6.8E-53 T 28-03-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 AM393_RS07610 b05b3d9bc47afc0e31697ddef52ffa71 419 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 6 406 6.7E-132 T 28-03-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 AM393_RS07610 b05b3d9bc47afc0e31697ddef52ffa71 419 Gene3D G3DSA:3.65.10.10 220 418 6.5E-50 T 28-03-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 AM393_RS07610 b05b3d9bc47afc0e31697ddef52ffa71 419 SUPERFAMILY SSF55205 1 418 4.58E-148 T 28-03-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 AM393_RS07610 b05b3d9bc47afc0e31697ddef52ffa71 419 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 416 44.45 T 28-03-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM393_RS07610 b05b3d9bc47afc0e31697ddef52ffa71 419 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 415 1.2E-185 T 28-03-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM393_RS13015 8f9b91399f92de685c8d611196b74ead 212 Pfam PF01625 Peptide methionine sulfoxide reductase 46 199 6.0E-68 T 28-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AM393_RS13015 8f9b91399f92de685c8d611196b74ead 212 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 43 205 39.002 T 28-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AM393_RS13015 8f9b91399f92de685c8d611196b74ead 212 SUPERFAMILY SSF55068 5 208 8.63E-86 T 28-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AM393_RS13015 8f9b91399f92de685c8d611196b74ead 212 Gene3D G3DSA:3.30.1060.10 29 209 5.8E-80 T 28-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AM393_RS13015 8f9b91399f92de685c8d611196b74ead 212 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 45 199 2.6E-71 T 28-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AM393_RS11825 3f733d5de1dc7caa2726ab57f15bd839 443 SMART SM00382 161 304 2.2E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS11825 3f733d5de1dc7caa2726ab57f15bd839 443 SUPERFAMILY SSF52172 5 185 7.83E-47 T 28-03-2018 IPR011006 CheY-like superfamily AM393_RS11825 3f733d5de1dc7caa2726ab57f15bd839 443 Gene3D G3DSA:1.10.10.60 398 443 1.0E-15 T 28-03-2018 AM393_RS11825 3f733d5de1dc7caa2726ab57f15bd839 443 SMART SM00448 6 117 6.0E-38 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM393_RS11825 3f733d5de1dc7caa2726ab57f15bd839 443 Gene3D G3DSA:3.40.50.300 138 313 6.8E-32 T 28-03-2018 AM393_RS11825 3f733d5de1dc7caa2726ab57f15bd839 443 Pfam PF00072 Response regulator receiver domain 8 116 4.1E-29 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM393_RS11825 3f733d5de1dc7caa2726ab57f15bd839 443 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 227 242 - T 28-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AM393_RS11825 3f733d5de1dc7caa2726ab57f15bd839 443 SUPERFAMILY SSF52540 141 385 1.14E-75 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS11825 3f733d5de1dc7caa2726ab57f15bd839 443 SUPERFAMILY SSF46689 401 442 1.49E-9 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS11825 3f733d5de1dc7caa2726ab57f15bd839 443 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 354 363 - T 28-03-2018 IPR025944 Sigma-54 interaction domain, conserved site AM393_RS11825 3f733d5de1dc7caa2726ab57f15bd839 443 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 410 427 2.9E-12 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM393_RS11825 3f733d5de1dc7caa2726ab57f15bd839 443 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 427 443 2.9E-12 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM393_RS11825 3f733d5de1dc7caa2726ab57f15bd839 443 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 165 178 - T 28-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AM393_RS11825 3f733d5de1dc7caa2726ab57f15bd839 443 Pfam PF00158 Sigma-54 interaction domain 141 307 6.1E-72 T 28-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AM393_RS11825 3f733d5de1dc7caa2726ab57f15bd839 443 Gene3D G3DSA:1.10.8.60 314 389 8.3E-27 T 28-03-2018 AM393_RS11825 3f733d5de1dc7caa2726ab57f15bd839 443 Pfam PF02954 Bacterial regulatory protein, Fis family 405 443 3.8E-15 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM393_RS11825 3f733d5de1dc7caa2726ab57f15bd839 443 Gene3D G3DSA:3.40.50.2300 1 137 9.9E-39 T 28-03-2018 AM393_RS15440 591ee1ef8e0ee4b808fbac5a541d01e4 232 Pfam PF17185 NlpE C-terminal OB domain 143 231 1.0E-32 T 28-03-2018 IPR033450 NlpE, C-terminal OB domain AM393_RS15440 591ee1ef8e0ee4b808fbac5a541d01e4 232 Pfam PF04170 NlpE N-terminal domain 44 128 9.9E-26 T 28-03-2018 IPR007298 Copper resistance lipoprotein NlpE AM393_RS28345 7d9819883fce2d2257947d7497e86087 326 SUPERFAMILY SSF53067 162 317 5.57E-14 T 28-03-2018 AM393_RS28345 7d9819883fce2d2257947d7497e86087 326 SUPERFAMILY SSF53067 1 159 4.14E-43 T 28-03-2018 AM393_RS28345 7d9819883fce2d2257947d7497e86087 326 Gene3D G3DSA:3.30.420.40 171 304 9.5E-13 T 28-03-2018 AM393_RS28345 7d9819883fce2d2257947d7497e86087 326 Pfam PF06406 StbA protein 1 319 8.9E-136 T 28-03-2018 IPR009440 Plasmid segregation protein ParM/StbA AM393_RS28345 7d9819883fce2d2257947d7497e86087 326 Gene3D G3DSA:3.30.420.40 1 170 8.2E-30 T 28-03-2018 AM393_RS17690 ad5465e28a4558b34ddfc7053e77f305 909 Pfam PF00158 Sigma-54 interaction domain 102 268 1.4E-44 T 28-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AM393_RS17690 ad5465e28a4558b34ddfc7053e77f305 909 Gene3D G3DSA:1.10.1790.10 803 906 8.6E-12 T 28-03-2018 IPR011608 PRD domain GO:0006355 AM393_RS17690 ad5465e28a4558b34ddfc7053e77f305 909 SUPERFAMILY SSF52540 102 336 3.95E-40 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS17690 ad5465e28a4558b34ddfc7053e77f305 909 Gene3D G3DSA:3.40.50.2300 681 776 3.3E-5 T 28-03-2018 AM393_RS17690 ad5465e28a4558b34ddfc7053e77f305 909 Gene3D G3DSA:3.40.50.510 529 680 5.8E-18 T 28-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 AM393_RS17690 ad5465e28a4558b34ddfc7053e77f305 909 SMART SM00382 125 276 2.8E-8 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS17690 ad5465e28a4558b34ddfc7053e77f305 909 Gene3D G3DSA:1.10.8.60 286 443 0.0012 T 28-03-2018 AM393_RS17690 ad5465e28a4558b34ddfc7053e77f305 909 Pfam PF03610 PTS system fructose IIA component 552 650 1.5E-4 T 28-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 AM393_RS17690 ad5465e28a4558b34ddfc7053e77f305 909 SUPERFAMILY SSF63520 807 900 6.02E-15 T 28-03-2018 IPR011608 PRD domain GO:0006355 AM393_RS17690 ad5465e28a4558b34ddfc7053e77f305 909 Gene3D G3DSA:3.40.50.300 108 285 1.2E-18 T 28-03-2018 AM393_RS17690 ad5465e28a4558b34ddfc7053e77f305 909 Pfam PF00874 PRD domain 815 900 6.4E-14 T 28-03-2018 IPR011608 PRD domain GO:0006355 AM393_RS17690 ad5465e28a4558b34ddfc7053e77f305 909 SUPERFAMILY SSF53062 549 670 1.59E-12 T 28-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 AM393_RS17690 ad5465e28a4558b34ddfc7053e77f305 909 Gene3D G3DSA:1.10.10.10 2 67 6.5E-7 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS21480 0d06acfb58a6943a99a5349911ebdd67 452 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 12 440 1.0E-163 T 28-03-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 AM393_RS21480 0d06acfb58a6943a99a5349911ebdd67 452 TIGRFAM TIGR00359 cello_pts_IIC: PTS system, cellobiose-specific IIC component 12 440 1.0E-163 T 28-03-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 AM393_RS21480 0d06acfb58a6943a99a5349911ebdd67 452 Pfam PF02378 Phosphotransferase system, EIIC 30 363 2.0E-47 T 28-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AM393_RS21480 0d06acfb58a6943a99a5349911ebdd67 452 PIRSF PIRSF006351 1 448 1.6E-130 T 28-03-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 AM393_RS05355 66fa18181e09aedeae33b3bace74918a 443 Gene3D G3DSA:3.40.1160.10 7 294 4.6E-56 T 28-03-2018 AM393_RS05355 66fa18181e09aedeae33b3bace74918a 443 PIRSF PIRSF000423 1 442 2.1E-209 T 28-03-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 AM393_RS05355 66fa18181e09aedeae33b3bace74918a 443 Hamap MF_01105 Amino-acid acetyltransferase [argA]. 1 442 235.415 T 28-03-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 AM393_RS05355 66fa18181e09aedeae33b3bace74918a 443 Gene3D G3DSA:3.40.630.30 297 442 6.3E-21 T 28-03-2018 AM393_RS05355 66fa18181e09aedeae33b3bace74918a 443 TIGRFAM TIGR01890 N-Ac-Glu-synth: amino-acid N-acetyltransferase 9 442 3.4E-198 T 28-03-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 AM393_RS05355 66fa18181e09aedeae33b3bace74918a 443 Pfam PF00583 Acetyltransferase (GNAT) family 336 413 5.3E-8 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AM393_RS05355 66fa18181e09aedeae33b3bace74918a 443 SUPERFAMILY SSF55729 229 418 3.9E-19 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM393_RS05355 66fa18181e09aedeae33b3bace74918a 443 Pfam PF00696 Amino acid kinase family 26 268 1.0E-33 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase AM393_RS05355 66fa18181e09aedeae33b3bace74918a 443 SUPERFAMILY SSF53633 5 291 1.14E-69 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase AM393_RS07555 2d1bcfa9156aa37655bb2be3ce9d36e6 209 Gene3D G3DSA:3.40.50.150 1 209 5.7E-58 T 28-03-2018 AM393_RS07555 2d1bcfa9156aa37655bb2be3ce9d36e6 209 Pfam PF01728 FtsJ-like methyltransferase 31 206 6.7E-58 T 28-03-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 AM393_RS07555 2d1bcfa9156aa37655bb2be3ce9d36e6 209 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 15 208 27.941 T 28-03-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 AM393_RS07555 2d1bcfa9156aa37655bb2be3ce9d36e6 209 TIGRFAM TIGR00438 rrmJ: ribosomal RNA large subunit methyltransferase J 20 206 1.8E-94 T 28-03-2018 IPR004512 Ribosomal RNA methyltransferase E, gammaproteobacteria GO:0006364|GO:0016436 KEGG: 00564+2.1.1.16 AM393_RS07555 2d1bcfa9156aa37655bb2be3ce9d36e6 209 SUPERFAMILY SSF53335 31 208 9.49E-44 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM393_RS07555 2d1bcfa9156aa37655bb2be3ce9d36e6 209 PIRSF PIRSF005461 1 209 4.0E-82 T 28-03-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 AM393_RS15775 5c91ddad10a19162f02302e0456d56dd 511 SUPERFAMILY SSF52777 267 503 4.14E-80 T 28-03-2018 AM393_RS15775 5c91ddad10a19162f02302e0456d56dd 511 Gene3D G3DSA:2.40.50.100 4 63 2.9E-12 T 28-03-2018 AM393_RS15775 5c91ddad10a19162f02302e0456d56dd 511 Pfam PF02817 e3 binding domain 221 255 1.1E-8 T 28-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 AM393_RS15775 5c91ddad10a19162f02302e0456d56dd 511 Pfam PF02817 e3 binding domain 154 188 5.1E-6 T 28-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 AM393_RS15775 5c91ddad10a19162f02302e0456d56dd 511 Gene3D G3DSA:3.30.559.10 270 511 5.0E-91 T 28-03-2018 AM393_RS15775 5c91ddad10a19162f02302e0456d56dd 511 SUPERFAMILY SSF51230 4 92 1.83E-20 T 28-03-2018 IPR011053 Single hybrid motif AM393_RS15775 5c91ddad10a19162f02302e0456d56dd 511 Gene3D G3DSA:3.90.1170.30 64 151 0.4 T 28-03-2018 AM393_RS15775 5c91ddad10a19162f02302e0456d56dd 511 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 29 58 - T 28-03-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 AM393_RS15775 5c91ddad10a19162f02302e0456d56dd 511 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 278 503 4.2E-84 T 28-03-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 AM393_RS15775 5c91ddad10a19162f02302e0456d56dd 511 Pfam PF00364 Biotin-requiring enzyme 6 76 1.1E-16 T 28-03-2018 IPR000089 Biotin/lipoyl attachment AM393_RS15775 5c91ddad10a19162f02302e0456d56dd 511 SUPERFAMILY SSF47005 152 190 4.97E-6 T 28-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 AM393_RS15775 5c91ddad10a19162f02302e0456d56dd 511 SUPERFAMILY SSF47005 214 257 8.5E-9 T 28-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 AM393_RS15775 5c91ddad10a19162f02302e0456d56dd 511 Gene3D G3DSA:4.10.320.10 152 209 6.5E-8 T 28-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 AM393_RS15775 5c91ddad10a19162f02302e0456d56dd 511 Gene3D G3DSA:4.10.320.10 211 269 3.5E-12 T 28-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 AM393_RS00185 c8577bd125d39bf8c2cacccf7cae52d0 402 Gene3D G3DSA:3.30.420.40 6 191 1.1E-59 T 28-03-2018 AM393_RS00185 c8577bd125d39bf8c2cacccf7cae52d0 402 Pfam PF00871 Acetokinase family 7 386 1.2E-150 T 28-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AM393_RS00185 c8577bd125d39bf8c2cacccf7cae52d0 402 SUPERFAMILY SSF53067 5 191 3.5E-62 T 28-03-2018 AM393_RS00185 c8577bd125d39bf8c2cacccf7cae52d0 402 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 199 216 - T 28-03-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AM393_RS00185 c8577bd125d39bf8c2cacccf7cae52d0 402 Hamap MF_00020 Acetate kinase [ackA]. 1 396 157.534 T 28-03-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AM393_RS00185 c8577bd125d39bf8c2cacccf7cae52d0 402 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 7 18 - T 28-03-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AM393_RS00185 c8577bd125d39bf8c2cacccf7cae52d0 402 PIRSF PIRSF000722 4 396 1.7E-128 T 28-03-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AM393_RS00185 c8577bd125d39bf8c2cacccf7cae52d0 402 Gene3D G3DSA:3.30.420.40 193 400 9.9E-74 T 28-03-2018 AM393_RS00185 c8577bd125d39bf8c2cacccf7cae52d0 402 Hamap MF_01881 Propionate kinase [tdcD]. 1 402 67.486 T 28-03-2018 IPR024917 Propionate kinase KEGG: 00640+2.7.2.15|MetaCyc: PWY-5437|MetaCyc: PWY-7013 AM393_RS00185 c8577bd125d39bf8c2cacccf7cae52d0 402 TIGRFAM TIGR00016 ackA: acetate kinase 4 392 9.0E-155 T 28-03-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AM393_RS00185 c8577bd125d39bf8c2cacccf7cae52d0 402 PRINTS PR00471 Acetate kinase family signature 199 220 5.2E-47 T 28-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AM393_RS00185 c8577bd125d39bf8c2cacccf7cae52d0 402 PRINTS PR00471 Acetate kinase family signature 296 309 5.2E-47 T 28-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AM393_RS00185 c8577bd125d39bf8c2cacccf7cae52d0 402 PRINTS PR00471 Acetate kinase family signature 374 386 5.2E-47 T 28-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AM393_RS00185 c8577bd125d39bf8c2cacccf7cae52d0 402 PRINTS PR00471 Acetate kinase family signature 318 334 5.2E-47 T 28-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AM393_RS00185 c8577bd125d39bf8c2cacccf7cae52d0 402 PRINTS PR00471 Acetate kinase family signature 169 182 5.2E-47 T 28-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AM393_RS00185 c8577bd125d39bf8c2cacccf7cae52d0 402 PRINTS PR00471 Acetate kinase family signature 7 18 5.2E-47 T 28-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AM393_RS00185 c8577bd125d39bf8c2cacccf7cae52d0 402 SUPERFAMILY SSF53067 153 392 4.9E-83 T 28-03-2018 AM393_RS18120 fda54550ecd37daad7d273088ed1ff56 269 Gene3D G3DSA:3.40.190.80 159 269 7.8E-14 T 28-03-2018 AM393_RS18120 fda54550ecd37daad7d273088ed1ff56 269 Pfam PF00459 Inositol monophosphatase family 11 240 1.6E-48 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AM393_RS18120 fda54550ecd37daad7d273088ed1ff56 269 Gene3D G3DSA:3.30.540.10 7 158 2.3E-44 T 28-03-2018 AM393_RS18120 fda54550ecd37daad7d273088ed1ff56 269 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 90 103 - T 28-03-2018 IPR020583 Inositol monophosphatase, metal-binding site AM393_RS18120 fda54550ecd37daad7d273088ed1ff56 269 PRINTS PR00377 Inositol monophosphatase superfamily signature 90 106 5.6E-29 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AM393_RS18120 fda54550ecd37daad7d273088ed1ff56 269 PRINTS PR00377 Inositol monophosphatase superfamily signature 215 239 5.6E-29 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AM393_RS18120 fda54550ecd37daad7d273088ed1ff56 269 PRINTS PR00377 Inositol monophosphatase superfamily signature 48 68 5.6E-29 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AM393_RS18120 fda54550ecd37daad7d273088ed1ff56 269 PRINTS PR00377 Inositol monophosphatase superfamily signature 139 162 5.6E-29 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AM393_RS18120 fda54550ecd37daad7d273088ed1ff56 269 PRINTS PR00377 Inositol monophosphatase superfamily signature 184 205 5.6E-29 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AM393_RS18120 fda54550ecd37daad7d273088ed1ff56 269 PRINTS PR00377 Inositol monophosphatase superfamily signature 70 86 5.6E-29 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AM393_RS18120 fda54550ecd37daad7d273088ed1ff56 269 SUPERFAMILY SSF56655 10 265 2.75E-65 T 28-03-2018 AM393_RS10270 81401129bb66c3de6a39b967f5cf56a5 540 Pfam PF02378 Phosphotransferase system, EIIC 10 346 5.0E-71 T 28-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AM393_RS10270 81401129bb66c3de6a39b967f5cf56a5 540 Pfam PF00367 phosphotransferase system, EIIB 454 483 2.1E-12 T 28-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AM393_RS10270 81401129bb66c3de6a39b967f5cf56a5 540 Gene3D G3DSA:3.30.1360.60 449 524 5.4E-24 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AM393_RS10270 81401129bb66c3de6a39b967f5cf56a5 540 TIGRFAM TIGR02005 PTS-IIBC-alpha: PTS system, alpha-glucoside-specific IIBC component 2 524 7.4E-272 T 28-03-2018 IPR010975 Phosphotransferase system, alpha-glucoside-specific IIBC component GO:0008982|GO:0009401 AM393_RS10270 81401129bb66c3de6a39b967f5cf56a5 540 SUPERFAMILY SSF55604 451 524 2.88E-19 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AM393_RS10270 81401129bb66c3de6a39b967f5cf56a5 540 TIGRFAM TIGR00852 pts-Glc: PTS system, maltose and glucose-specific subfamily, IIC component 60 358 5.6E-89 T 28-03-2018 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component GO:0008982|GO:0009401|GO:0016021 AM393_RS10270 81401129bb66c3de6a39b967f5cf56a5 540 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 409 510 1.4E-27 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AM393_RS10270 81401129bb66c3de6a39b967f5cf56a5 540 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 463 480 - T 28-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AM393_RS15945 caa40b9933576c86af83c8228b2c8878 236 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 28 155 1.7E-5 T 28-03-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 AM393_RS15945 caa40b9933576c86af83c8228b2c8878 236 Gene3D G3DSA:2.60.40.10 27 156 5.7E-16 T 28-03-2018 IPR013783 Immunoglobulin-like fold AM393_RS15945 caa40b9933576c86af83c8228b2c8878 236 SUPERFAMILY SSF49354 24 127 3.4E-9 T 28-03-2018 IPR008962 PapD-like AM393_RS20745 1e7d6c8562726e9c2a24a11b127b90f9 317 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 1 317 1.3E-146 T 28-03-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AM393_RS20745 1e7d6c8562726e9c2a24a11b127b90f9 317 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 1 317 69.806 T 28-03-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AM393_RS20745 1e7d6c8562726e9c2a24a11b127b90f9 317 Gene3D G3DSA:3.40.47.10 2 162 2.4E-41 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM393_RS20745 1e7d6c8562726e9c2a24a11b127b90f9 317 SUPERFAMILY SSF53901 3 317 1.71E-69 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM393_RS20745 1e7d6c8562726e9c2a24a11b127b90f9 317 Gene3D G3DSA:3.40.47.10 163 317 7.5E-42 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM393_RS20745 1e7d6c8562726e9c2a24a11b127b90f9 317 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 106 183 8.1E-29 T 28-03-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AM393_RS20745 1e7d6c8562726e9c2a24a11b127b90f9 317 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 228 316 5.4E-36 T 28-03-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AM393_RS08805 442b265c9575637c6e71a24263cd547a 581 Pfam PF01019 Gamma-glutamyltranspeptidase 65 573 2.0E-191 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AM393_RS08805 442b265c9575637c6e71a24263cd547a 581 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 50 572 2.3E-228 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AM393_RS08805 442b265c9575637c6e71a24263cd547a 581 ProSitePatterns PS00462 Gamma-glutamyltranspeptidase signature. 392 416 - T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AM393_RS08805 442b265c9575637c6e71a24263cd547a 581 SUPERFAMILY SSF56235 42 574 1.81E-197 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AM393_RS08805 442b265c9575637c6e71a24263cd547a 581 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 392 410 4.2E-81 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AM393_RS08805 442b265c9575637c6e71a24263cd547a 581 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 416 434 4.2E-81 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AM393_RS08805 442b265c9575637c6e71a24263cd547a 581 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 72 97 4.2E-81 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AM393_RS08805 442b265c9575637c6e71a24263cd547a 581 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 481 498 4.2E-81 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AM393_RS08805 442b265c9575637c6e71a24263cd547a 581 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 262 278 4.2E-81 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AM393_RS08805 442b265c9575637c6e71a24263cd547a 581 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 292 311 4.2E-81 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AM393_RS08805 442b265c9575637c6e71a24263cd547a 581 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 145 163 4.2E-81 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AM393_RS08805 442b265c9575637c6e71a24263cd547a 581 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 457 472 4.2E-81 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AM393_RS08805 442b265c9575637c6e71a24263cd547a 581 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 163 182 4.2E-81 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AM393_RS25785 d993d119c0fa07701c41c55b205c94fd 327 Gene3D G3DSA:3.40.190.10 25 324 6.2E-31 T 28-03-2018 AM393_RS25785 d993d119c0fa07701c41c55b205c94fd 327 SUPERFAMILY SSF53850 30 241 2.25E-19 T 28-03-2018 AM393_RS25785 d993d119c0fa07701c41c55b205c94fd 327 Pfam PF09084 NMT1/THI5 like 39 242 1.6E-25 T 28-03-2018 IPR015168 SsuA/THI5-like AM393_RS26005 726fc46a1b71023436c6b7439f2bf94a 445 PRINTS PR00605 Class IC cytochrome C signature 379 401 7.7E-6 T 28-03-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 AM393_RS26005 726fc46a1b71023436c6b7439f2bf94a 445 PRINTS PR00605 Class IC cytochrome C signature 326 337 7.7E-6 T 28-03-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 AM393_RS26005 726fc46a1b71023436c6b7439f2bf94a 445 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 316 401 9.3E-11 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM393_RS26005 726fc46a1b71023436c6b7439f2bf94a 445 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 29 127 2.5E-5 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM393_RS26005 726fc46a1b71023436c6b7439f2bf94a 445 Gene3D G3DSA:1.10.760.10 164 308 3.6E-18 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM393_RS26005 726fc46a1b71023436c6b7439f2bf94a 445 SUPERFAMILY SSF46626 179 297 3.1E-17 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM393_RS26005 726fc46a1b71023436c6b7439f2bf94a 445 PIRSF PIRSF000018 1 438 1.4E-169 T 28-03-2018 IPR014353 Membrane-bound alcohol dehydrogenase, cytochrome c subunit GO:0005506|GO:0016020|GO:0016614|GO:0020037 AM393_RS26005 726fc46a1b71023436c6b7439f2bf94a 445 SUPERFAMILY SSF46626 319 425 2.15E-25 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM393_RS26005 726fc46a1b71023436c6b7439f2bf94a 445 Gene3D G3DSA:1.10.760.10 309 432 9.3E-23 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM393_RS26005 726fc46a1b71023436c6b7439f2bf94a 445 Gene3D G3DSA:1.10.760.10 13 144 5.2E-18 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM393_RS26005 726fc46a1b71023436c6b7439f2bf94a 445 SUPERFAMILY SSF46626 20 155 6.3E-23 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM393_RS09390 9a3a5df7175bb21207be00568131f36f 70 Pfam PF01848 Hok/gef family 25 66 1.9E-21 T 28-03-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 AM393_RS09390 9a3a5df7175bb21207be00568131f36f 70 PRINTS PR00281 Hok/Gef cell toxic protein family signature 45 67 2.3E-12 T 28-03-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 AM393_RS09390 9a3a5df7175bb21207be00568131f36f 70 PRINTS PR00281 Hok/Gef cell toxic protein family signature 25 43 2.3E-12 T 28-03-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 AM393_RS09390 9a3a5df7175bb21207be00568131f36f 70 ProSitePatterns PS00556 Hok/gef family cell toxic proteins signature. 30 49 - T 28-03-2018 IPR018084 Hok/gef cell toxic protein, conserved site GO:0016020 AM393_RS09390 9a3a5df7175bb21207be00568131f36f 70 ProDom PD005979 PLASMID MEMBRANE TRANSMEMBRANE POST-SEGREGATION KILLING INHERITANCE ALTERING PERMEABILITY STABLE MAINTENANCE 21 66 3.0E-13 T 28-03-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 AM393_RS16410 1d2020d4b5144fb94ac302ec7a2cae17 252 Gene3D G3DSA:1.10.10.10 6 77 5.7E-9 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS16410 1d2020d4b5144fb94ac302ec7a2cae17 252 SUPERFAMILY SSF55781 75 248 2.35E-41 T 28-03-2018 IPR029016 GAF domain-like AM393_RS16410 1d2020d4b5144fb94ac302ec7a2cae17 252 Gene3D G3DSA:3.30.450.40 78 250 1.1E-42 T 28-03-2018 IPR029016 GAF domain-like AM393_RS16410 1d2020d4b5144fb94ac302ec7a2cae17 252 SUPERFAMILY SSF46785 14 82 5.22E-9 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS16410 1d2020d4b5144fb94ac302ec7a2cae17 252 Pfam PF01614 Bacterial transcriptional regulator 130 243 4.7E-24 T 28-03-2018 IPR014757 Transcription regulator IclR, C-terminal AM393_RS16410 1d2020d4b5144fb94ac302ec7a2cae17 252 Pfam PF09339 IclR helix-turn-helix domain 14 64 2.3E-9 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AM393_RS16410 1d2020d4b5144fb94ac302ec7a2cae17 252 SMART SM00346 11 99 7.9E-16 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AM393_RS16655 43ce34c5bab842bd4f608cb2f567d3ca 356 SUPERFAMILY SSF53822 63 327 9.28E-51 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AM393_RS16655 43ce34c5bab842bd4f608cb2f567d3ca 356 Gene3D G3DSA:3.40.50.2300 59 180 6.7E-20 T 28-03-2018 AM393_RS16655 43ce34c5bab842bd4f608cb2f567d3ca 356 Gene3D G3DSA:3.40.50.2300 181 304 1.0E-36 T 28-03-2018 AM393_RS16655 43ce34c5bab842bd4f608cb2f567d3ca 356 Pfam PF13377 Periplasmic binding protein-like domain 173 330 1.4E-29 T 28-03-2018 AM393_RS16655 43ce34c5bab842bd4f608cb2f567d3ca 356 SUPERFAMILY SSF47413 5 63 8.85E-18 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM393_RS16655 43ce34c5bab842bd4f608cb2f567d3ca 356 Gene3D G3DSA:1.10.260.40 6 58 2.6E-21 T 28-03-2018 AM393_RS16655 43ce34c5bab842bd4f608cb2f567d3ca 356 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 17 27 1.3E-5 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM393_RS16655 43ce34c5bab842bd4f608cb2f567d3ca 356 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 7 17 1.3E-5 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM393_RS16655 43ce34c5bab842bd4f608cb2f567d3ca 356 ProSitePatterns PS00356 LacI-type HTH domain signature. 8 26 - T 28-03-2018 AM393_RS16655 43ce34c5bab842bd4f608cb2f567d3ca 356 Pfam PF00356 Bacterial regulatory proteins, lacI family 7 52 2.8E-18 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM393_RS16655 43ce34c5bab842bd4f608cb2f567d3ca 356 SMART SM00354 5 75 8.0E-28 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM393_RS11925 2823805f31fc56dc13a5e7e9a7df1eca 164 Pfam PF03830 PTS system sorbose subfamily IIB component 3 149 1.1E-52 T 28-03-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 AM393_RS11925 2823805f31fc56dc13a5e7e9a7df1eca 164 TIGRFAM TIGR00854 pts-sorbose: PTS system, mannose/fructose/sorbose family, IIB component 2 152 1.8E-73 T 28-03-2018 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup GO:0005737|GO:0008982|GO:0009401 AM393_RS11925 2823805f31fc56dc13a5e7e9a7df1eca 164 SUPERFAMILY SSF52728 1 161 2.49E-54 T 28-03-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 AM393_RS11925 2823805f31fc56dc13a5e7e9a7df1eca 164 Gene3D G3DSA:3.40.35.10 2 158 5.3E-59 T 28-03-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 AM393_RS25430 931d0c9868aeb8e03e4bb4a6262a7c19 501 Gene3D G3DSA:1.20.1250.20 9 210 2.9E-25 T 28-03-2018 AM393_RS25430 931d0c9868aeb8e03e4bb4a6262a7c19 501 Gene3D G3DSA:1.20.1250.20 270 497 1.0E-16 T 28-03-2018 AM393_RS25430 931d0c9868aeb8e03e4bb4a6262a7c19 501 Pfam PF00854 POT family 89 446 1.4E-89 T 28-03-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-427975 AM393_RS25430 931d0c9868aeb8e03e4bb4a6262a7c19 501 Hamap MF_01878 Dipeptide and tripeptide permease A [dtpA]. 1 489 50.394 T 28-03-2018 IPR023517 Amino acid/peptide transporter family, dipeptide and tripeptide permease A GO:0006857|GO:0015197|GO:0016020 AM393_RS25430 931d0c9868aeb8e03e4bb4a6262a7c19 501 SUPERFAMILY SSF103473 257 485 3.14E-29 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS25430 931d0c9868aeb8e03e4bb4a6262a7c19 501 SUPERFAMILY SSF103473 14 212 3.14E-29 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS25430 931d0c9868aeb8e03e4bb4a6262a7c19 501 ProSitePatterns PS01022 PTR2 family proton/oligopeptide symporters signature 1. 77 101 - T 28-03-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 AM393_RS25430 931d0c9868aeb8e03e4bb4a6262a7c19 501 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 152 164 - T 28-03-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 AM393_RS25430 931d0c9868aeb8e03e4bb4a6262a7c19 501 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 17 485 1.4E-140 T 28-03-2018 IPR005279 Dipeptide/tripeptide permease GO:0015197|GO:0015833|GO:0016020 AM393_RS24470 f9ab15d7a317e2542bb32790bff6dd79 231 Gene3D G3DSA:1.20.910.10 4 231 5.6E-61 T 28-03-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 AM393_RS24470 f9ab15d7a317e2542bb32790bff6dd79 231 SUPERFAMILY SSF48613 5 222 1.05E-68 T 28-03-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 AM393_RS24470 f9ab15d7a317e2542bb32790bff6dd79 231 TIGRFAM TIGR04306 salvage_TenA: thiaminase II 20 223 1.9E-39 T 28-03-2018 IPR027574 Thiaminase II GO:0006772|GO:0050334 KEGG: 00730+3.5.99.2|MetaCyc: PWY-6899|MetaCyc: PWY-7356 AM393_RS24470 f9ab15d7a317e2542bb32790bff6dd79 231 Pfam PF03070 TENA/THI-4/PQQC family 21 224 2.6E-47 T 28-03-2018 IPR004305 Thiaminase-2/PQQC AM393_RS23970 b4a27b16ea1c9bd79b3c40cacdc919d5 304 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 248 290 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM393_RS23970 b4a27b16ea1c9bd79b3c40cacdc919d5 304 SUPERFAMILY SSF46689 195 244 3.64E-10 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS23970 b4a27b16ea1c9bd79b3c40cacdc919d5 304 Pfam PF12833 Helix-turn-helix domain 217 291 3.8E-22 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM393_RS23970 b4a27b16ea1c9bd79b3c40cacdc919d5 304 Gene3D G3DSA:1.10.10.60 250 304 2.9E-14 T 28-03-2018 AM393_RS23970 b4a27b16ea1c9bd79b3c40cacdc919d5 304 Gene3D G3DSA:1.10.10.60 181 249 4.0E-13 T 28-03-2018 AM393_RS23970 b4a27b16ea1c9bd79b3c40cacdc919d5 304 SUPERFAMILY SSF46689 247 293 6.27E-10 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS23970 b4a27b16ea1c9bd79b3c40cacdc919d5 304 Pfam PF06719 AraC-type transcriptional regulator N-terminus 31 181 1.0E-41 T 28-03-2018 IPR009594 Transcription regulator HTH, AraC, N-terminal AM393_RS23970 b4a27b16ea1c9bd79b3c40cacdc919d5 304 SMART SM00342 211 294 1.8E-25 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM393_RS23110 535a35bb2a36aa961d4d9dfab92d3124 308 Gene3D G3DSA:3.40.190.10 188 275 4.5E-17 T 28-03-2018 AM393_RS23110 535a35bb2a36aa961d4d9dfab92d3124 308 Pfam PF03466 LysR substrate binding domain 97 296 1.7E-34 T 28-03-2018 IPR005119 LysR, substrate-binding AM393_RS23110 535a35bb2a36aa961d4d9dfab92d3124 308 SUPERFAMILY SSF46785 9 89 3.08E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS23110 535a35bb2a36aa961d4d9dfab92d3124 308 Gene3D G3DSA:3.40.190.10 99 187 7.8E-14 T 28-03-2018 AM393_RS23110 535a35bb2a36aa961d4d9dfab92d3124 308 Gene3D G3DSA:1.10.10.10 4 91 5.8E-10 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS23110 535a35bb2a36aa961d4d9dfab92d3124 308 SUPERFAMILY SSF53850 98 297 8.51E-29 T 28-03-2018 AM393_RS23110 535a35bb2a36aa961d4d9dfab92d3124 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 64 1.8E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS13370 9406509c4e6c14cd43eec48cf8da6c6a 285 SUPERFAMILY SSF46689 13 86 2.69E-19 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS13370 9406509c4e6c14cd43eec48cf8da6c6a 285 Pfam PF01418 Helix-turn-helix domain, rpiR family 12 82 1.4E-12 T 28-03-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 AM393_RS13370 9406509c4e6c14cd43eec48cf8da6c6a 285 Gene3D G3DSA:3.40.50.10490 82 285 1.5E-28 T 28-03-2018 AM393_RS13370 9406509c4e6c14cd43eec48cf8da6c6a 285 SUPERFAMILY SSF53697 111 272 1.5E-25 T 28-03-2018 AM393_RS13370 9406509c4e6c14cd43eec48cf8da6c6a 285 Pfam PF01380 SIS domain 144 269 1.9E-24 T 28-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AM393_RS13370 9406509c4e6c14cd43eec48cf8da6c6a 285 Gene3D G3DSA:1.10.10.10 6 81 5.3E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS00700 b89f2ede0ab0ea307bead19a9d5f26cf 246 Gene3D G3DSA:3.30.70.980 83 176 5.1E-32 T 28-03-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM393_RS00700 b89f2ede0ab0ea307bead19a9d5f26cf 246 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 238 36.585 T 28-03-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM393_RS00700 b89f2ede0ab0ea307bead19a9d5f26cf 246 Gene3D G3DSA:3.30.70.980 177 246 2.8E-12 T 28-03-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM393_RS00700 b89f2ede0ab0ea307bead19a9d5f26cf 246 Pfam PF01709 Transcriptional regulator 5 235 1.6E-94 T 28-03-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM393_RS00700 b89f2ede0ab0ea307bead19a9d5f26cf 246 SUPERFAMILY SSF75625 3 244 5.23E-97 T 28-03-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM393_RS00700 b89f2ede0ab0ea307bead19a9d5f26cf 246 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 236 1.1E-106 T 28-03-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM393_RS00700 b89f2ede0ab0ea307bead19a9d5f26cf 246 Gene3D G3DSA:1.10.10.200 1 78 2.4E-30 T 28-03-2018 IPR017856 Integrase, N-terminal zinc-binding domain-like AM393_RS22095 e7162943929802e034de2a401f964c9a 176 SUPERFAMILY SSF53955 9 171 3.73E-33 T 28-03-2018 IPR023346 Lysozyme-like domain AM393_RS22095 e7162943929802e034de2a401f964c9a 176 Gene3D G3DSA:1.10.530.40 1 175 7.8E-44 T 28-03-2018 IPR023347 Lysozyme domain GO:0003796 AM393_RS22095 e7162943929802e034de2a401f964c9a 176 Pfam PF00959 Phage lysozyme 47 165 3.7E-26 T 28-03-2018 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 AM393_RS27420 c1fbb7a326b440232872cb27af6e988d 1048 Gene3D G3DSA:3.30.2090.10 183 271 5.3E-19 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM393_RS27420 c1fbb7a326b440232872cb27af6e988d 1048 SUPERFAMILY SSF82714 723 806 5.75E-17 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM393_RS27420 c1fbb7a326b440232872cb27af6e988d 1048 Gene3D G3DSA:1.20.1640.10 287 517 1.8E-43 T 28-03-2018 AM393_RS27420 c1fbb7a326b440232872cb27af6e988d 1048 Gene3D G3DSA:1.20.1640.10 823 1047 9.3E-29 T 28-03-2018 AM393_RS27420 c1fbb7a326b440232872cb27af6e988d 1048 Pfam PF00873 AcrB/AcrD/AcrF family 6 1038 4.2E-238 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS27420 c1fbb7a326b440232872cb27af6e988d 1048 SUPERFAMILY SSF82866 294 505 5.23E-40 T 28-03-2018 AM393_RS27420 c1fbb7a326b440232872cb27af6e988d 1048 SUPERFAMILY SSF82714 185 269 2.88E-20 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM393_RS27420 c1fbb7a326b440232872cb27af6e988d 1048 PRINTS PR00702 Acriflavin resistance protein family signature 389 413 3.2E-22 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS27420 c1fbb7a326b440232872cb27af6e988d 1048 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 3.2E-22 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS27420 c1fbb7a326b440232872cb27af6e988d 1048 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 3.2E-22 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS27420 c1fbb7a326b440232872cb27af6e988d 1048 PRINTS PR00702 Acriflavin resistance protein family signature 334 357 3.2E-22 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS27420 c1fbb7a326b440232872cb27af6e988d 1048 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 3.2E-22 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS27420 c1fbb7a326b440232872cb27af6e988d 1048 PRINTS PR00702 Acriflavin resistance protein family signature 361 382 3.2E-22 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS27420 c1fbb7a326b440232872cb27af6e988d 1048 Gene3D G3DSA:3.30.70.1430 45 140 3.6E-21 T 28-03-2018 AM393_RS27420 c1fbb7a326b440232872cb27af6e988d 1048 SUPERFAMILY SSF82693 46 127 2.14E-20 T 28-03-2018 AM393_RS27420 c1fbb7a326b440232872cb27af6e988d 1048 Gene3D G3DSA:3.30.70.1430 567 665 9.5E-9 T 28-03-2018 AM393_RS27420 c1fbb7a326b440232872cb27af6e988d 1048 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1046 0.0 T 28-03-2018 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 AM393_RS27420 c1fbb7a326b440232872cb27af6e988d 1048 Gene3D G3DSA:3.30.2090.10 723 809 4.2E-19 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM393_RS27420 c1fbb7a326b440232872cb27af6e988d 1048 SUPERFAMILY SSF82693 138 184 5.75E-21 T 28-03-2018 AM393_RS27420 c1fbb7a326b440232872cb27af6e988d 1048 SUPERFAMILY SSF82693 271 328 5.75E-21 T 28-03-2018 AM393_RS27420 c1fbb7a326b440232872cb27af6e988d 1048 SUPERFAMILY SSF82866 805 1044 1.15E-43 T 28-03-2018 AM393_RS10905 4a0d6cd7265fe3c30e25ea67f10fe41d 488 TIGRFAM TIGR02627 rhamnulo_kin: rhamnulokinase 7 459 1.1E-227 T 28-03-2018 IPR013449 Rhamnulokinase GO:0008993|GO:0019301 KEGG: 00040+2.7.1.5|KEGG: 00051+2.7.1.5 AM393_RS10905 4a0d6cd7265fe3c30e25ea67f10fe41d 488 SUPERFAMILY SSF53067 251 471 8.55E-31 T 28-03-2018 AM393_RS10905 4a0d6cd7265fe3c30e25ea67f10fe41d 488 Gene3D G3DSA:3.30.420.40 1 235 2.4E-48 T 28-03-2018 AM393_RS10905 4a0d6cd7265fe3c30e25ea67f10fe41d 488 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 7 243 4.7E-29 T 28-03-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 AM393_RS10905 4a0d6cd7265fe3c30e25ea67f10fe41d 488 SUPERFAMILY SSF53067 6 245 8.42E-50 T 28-03-2018 AM393_RS10905 4a0d6cd7265fe3c30e25ea67f10fe41d 488 Gene3D G3DSA:3.30.420.40 236 484 2.4E-38 T 28-03-2018 AM393_RS10905 4a0d6cd7265fe3c30e25ea67f10fe41d 488 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 253 439 3.1E-26 T 28-03-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 AM393_RS10905 4a0d6cd7265fe3c30e25ea67f10fe41d 488 Hamap MF_01535 Rhamnulokinase [rhaB]. 6 483 52.767 T 28-03-2018 IPR013449 Rhamnulokinase GO:0008993|GO:0019301 KEGG: 00040+2.7.1.5|KEGG: 00051+2.7.1.5 AM393_RS28240 5dbf0ef1971913d9be0bddb82c388ff4 384 Gene3D G3DSA:3.40.30.10 223 384 2.0E-13 T 28-03-2018 AM393_RS28240 5dbf0ef1971913d9be0bddb82c388ff4 384 Pfam PF13098 Thioredoxin-like domain 230 361 2.3E-7 T 28-03-2018 IPR012336 Thioredoxin-like fold AM393_RS28240 5dbf0ef1971913d9be0bddb82c388ff4 384 SUPERFAMILY SSF52833 215 376 1.78E-14 T 28-03-2018 IPR012336 Thioredoxin-like fold AM393_RS22655 6df93546a92ff077374fcf67cd4244cb 340 Pfam PF05138 Phenylacetic acid catabolic protein 48 322 1.4E-99 T 28-03-2018 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C GO:0010124 AM393_RS22655 6df93546a92ff077374fcf67cd4244cb 340 SUPERFAMILY SSF47240 58 300 1.53E-81 T 28-03-2018 IPR009078 Ferritin-like superfamily AM393_RS22655 6df93546a92ff077374fcf67cd4244cb 340 Gene3D G3DSA:1.10.620.20 19 322 2.2E-79 T 28-03-2018 AM393_RS22655 6df93546a92ff077374fcf67cd4244cb 340 TIGRFAM TIGR02156 PA_CoA_Oxy1: phenylacetate-CoA oxygenase, PaaG subunit 38 326 3.1E-156 T 28-03-2018 IPR011881 1,2-phenylacetyl-CoA epoxidase, subunit A GO:0010124|GO:0097266 KEGG: 00360+1.14.13.14+1.14.13.149|KEGG: 00940+1.14.13.14|MetaCyc: PWY-5176 AM393_RS21530 6d53f3b8b17ae8056fb80d7bdc8f8fa1 222 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 88 191 9.4E-13 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM393_RS21530 6d53f3b8b17ae8056fb80d7bdc8f8fa1 222 SUPERFAMILY SSF56784 7 216 3.07E-51 T 28-03-2018 IPR023214 HAD-like domain AM393_RS21530 6d53f3b8b17ae8056fb80d7bdc8f8fa1 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 7 18 1.0E-7 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM393_RS21530 6d53f3b8b17ae8056fb80d7bdc8f8fa1 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 153 173 1.0E-7 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM393_RS21530 6d53f3b8b17ae8056fb80d7bdc8f8fa1 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 104 117 1.0E-7 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM393_RS21530 6d53f3b8b17ae8056fb80d7bdc8f8fa1 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 135 151 1.0E-7 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM393_RS21530 6d53f3b8b17ae8056fb80d7bdc8f8fa1 222 Gene3D G3DSA:3.40.50.1000 77 200 7.2E-27 T 28-03-2018 IPR023214 HAD-like domain AM393_RS21530 6d53f3b8b17ae8056fb80d7bdc8f8fa1 222 Gene3D G3DSA:1.10.150.240 32 76 3.4E-17 T 28-03-2018 IPR023198 Phosphoglycolate phosphatase, domain 2 AM393_RS21530 6d53f3b8b17ae8056fb80d7bdc8f8fa1 222 Pfam PF13419 Haloacid dehalogenase-like hydrolase 11 191 7.8E-24 T 28-03-2018 IPR023214 HAD-like domain AM393_RS21530 6d53f3b8b17ae8056fb80d7bdc8f8fa1 222 Gene3D G3DSA:3.40.50.1000 1 31 0.056 T 28-03-2018 IPR023214 HAD-like domain AM393_RS22685 c3a2dff22b0a59803ca2ae4dd75f6a54 262 Gene3D G3DSA:3.90.226.10 1 222 1.2E-64 T 28-03-2018 AM393_RS22685 c3a2dff22b0a59803ca2ae4dd75f6a54 262 Pfam PF00378 Enoyl-CoA hydratase/isomerase 10 261 1.7E-60 T 28-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 AM393_RS22685 c3a2dff22b0a59803ca2ae4dd75f6a54 262 Gene3D G3DSA:1.10.12.10 223 262 4.1E-14 T 28-03-2018 IPR014748 Crontonase, C-terminal AM393_RS22685 c3a2dff22b0a59803ca2ae4dd75f6a54 262 TIGRFAM TIGR02280 PaaB1: phenylacetate degradation probable enoyl-CoA hydratase PaaB 5 262 6.5E-137 T 28-03-2018 IPR011968 Phenylacetate degradation probable enoyl-CoA hydratase PaaB GO:0010124 KEGG: 00360+5.3.3.18 AM393_RS22685 c3a2dff22b0a59803ca2ae4dd75f6a54 262 SUPERFAMILY SSF52096 4 261 9.23E-84 T 28-03-2018 IPR029045 ClpP/crotonase-like domain AM393_RS12000 23665fd6f5ff15c6f3e2ba5a431f92ea 425 PIRSF PIRSF006054 1 425 5.0E-146 T 28-03-2018 IPR021144 Uncharacterised protein family UPF0597 AM393_RS12000 23665fd6f5ff15c6f3e2ba5a431f92ea 425 Hamap MF_01845 UPF0597 protein YhaM [yhaM]. 5 424 32.936 T 28-03-2018 IPR021144 Uncharacterised protein family UPF0597 AM393_RS12000 23665fd6f5ff15c6f3e2ba5a431f92ea 425 Gene3D G3DSA:3.40.50.720 74 154 0.001 T 28-03-2018 AM393_RS12000 23665fd6f5ff15c6f3e2ba5a431f92ea 425 Gene3D G3DSA:1.10.4100.10 259 389 1.8E-8 T 28-03-2018 AM393_RS12000 23665fd6f5ff15c6f3e2ba5a431f92ea 425 Pfam PF03313 Serine dehydratase alpha chain 164 419 9.3E-45 T 28-03-2018 IPR005130 Serine dehydratase-like, alpha subunit AM393_RS03635 93662622ddccbff49b51964e0c4cf45f 267 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 81 94 - T 28-03-2018 IPR020583 Inositol monophosphatase, metal-binding site AM393_RS03635 93662622ddccbff49b51964e0c4cf45f 267 Gene3D G3DSA:3.30.540.10 1 145 6.1E-50 T 28-03-2018 AM393_RS03635 93662622ddccbff49b51964e0c4cf45f 267 Pfam PF00459 Inositol monophosphatase family 2 260 5.8E-75 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AM393_RS03635 93662622ddccbff49b51964e0c4cf45f 267 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 211 225 - T 28-03-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 AM393_RS03635 93662622ddccbff49b51964e0c4cf45f 267 SUPERFAMILY SSF56655 1 259 3.8E-86 T 28-03-2018 AM393_RS03635 93662622ddccbff49b51964e0c4cf45f 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 156 182 2.8E-36 T 28-03-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 AM393_RS03635 93662622ddccbff49b51964e0c4cf45f 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 17 39 2.8E-36 T 28-03-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 AM393_RS03635 93662622ddccbff49b51964e0c4cf45f 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 104 123 2.8E-36 T 28-03-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 AM393_RS03635 93662622ddccbff49b51964e0c4cf45f 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 198 210 2.8E-36 T 28-03-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 AM393_RS03635 93662622ddccbff49b51964e0c4cf45f 267 Gene3D G3DSA:3.40.190.80 146 267 9.7E-37 T 28-03-2018 AM393_RS03635 93662622ddccbff49b51964e0c4cf45f 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 38 58 2.0E-60 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AM393_RS03635 93662622ddccbff49b51964e0c4cf45f 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 130 153 2.0E-60 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AM393_RS03635 93662622ddccbff49b51964e0c4cf45f 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 81 97 2.0E-60 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AM393_RS03635 93662622ddccbff49b51964e0c4cf45f 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 208 232 2.0E-60 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AM393_RS03635 93662622ddccbff49b51964e0c4cf45f 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 177 198 2.0E-60 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AM393_RS03635 93662622ddccbff49b51964e0c4cf45f 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 60 76 2.0E-60 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AM393_RS17370 83b2598676cc1a2c5f68dd80d37a5260 491 Gene3D G3DSA:1.20.1250.20 2 190 2.8E-26 T 28-03-2018 AM393_RS17370 83b2598676cc1a2c5f68dd80d37a5260 491 ProSitePatterns PS01022 PTR2 family proton/oligopeptide symporters signature 1. 64 88 - T 28-03-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 AM393_RS17370 83b2598676cc1a2c5f68dd80d37a5260 491 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 139 151 - T 28-03-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 AM393_RS17370 83b2598676cc1a2c5f68dd80d37a5260 491 SUPERFAMILY SSF103473 254 476 4.27E-29 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS17370 83b2598676cc1a2c5f68dd80d37a5260 491 SUPERFAMILY SSF103473 4 212 4.27E-29 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS17370 83b2598676cc1a2c5f68dd80d37a5260 491 Gene3D G3DSA:1.20.1250.20 260 482 1.4E-6 T 28-03-2018 AM393_RS17370 83b2598676cc1a2c5f68dd80d37a5260 491 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 6 459 9.3E-85 T 28-03-2018 IPR005279 Dipeptide/tripeptide permease GO:0015197|GO:0015833|GO:0016020 AM393_RS17370 83b2598676cc1a2c5f68dd80d37a5260 491 Pfam PF00854 POT family 76 440 1.9E-83 T 28-03-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-427975 AM393_RS12690 20afe08ea2bcf6182d4fd74d2ca414fb 177 PIRSF PIRSF036893 1 177 3.4E-43 T 28-03-2018 IPR022271 Lipocalin, ApoD type AM393_RS12690 20afe08ea2bcf6182d4fd74d2ca414fb 177 Pfam PF08212 Lipocalin-like domain 34 174 3.6E-40 T 28-03-2018 IPR000566 Lipocalin/cytosolic fatty-acid binding domain AM393_RS12690 20afe08ea2bcf6182d4fd74d2ca414fb 177 Gene3D G3DSA:2.40.128.20 2 175 1.2E-41 T 28-03-2018 IPR012674 Calycin AM393_RS12690 20afe08ea2bcf6182d4fd74d2ca414fb 177 SUPERFAMILY SSF50814 12 174 7.17E-45 T 28-03-2018 IPR012674 Calycin AM393_RS12690 20afe08ea2bcf6182d4fd74d2ca414fb 177 PRINTS PR01171 Bacterial lipocalin signature 51 67 3.5E-41 T 28-03-2018 IPR002446 Lipocalin, bacterial GO:0005215 AM393_RS12690 20afe08ea2bcf6182d4fd74d2ca414fb 177 PRINTS PR01171 Bacterial lipocalin signature 70 79 3.5E-41 T 28-03-2018 IPR002446 Lipocalin, bacterial GO:0005215 AM393_RS12690 20afe08ea2bcf6182d4fd74d2ca414fb 177 PRINTS PR01171 Bacterial lipocalin signature 121 129 3.5E-41 T 28-03-2018 IPR002446 Lipocalin, bacterial GO:0005215 AM393_RS12690 20afe08ea2bcf6182d4fd74d2ca414fb 177 PRINTS PR01171 Bacterial lipocalin signature 34 48 3.5E-41 T 28-03-2018 IPR002446 Lipocalin, bacterial GO:0005215 AM393_RS12690 20afe08ea2bcf6182d4fd74d2ca414fb 177 PRINTS PR01171 Bacterial lipocalin signature 104 118 3.5E-41 T 28-03-2018 IPR002446 Lipocalin, bacterial GO:0005215 AM393_RS12690 20afe08ea2bcf6182d4fd74d2ca414fb 177 PRINTS PR01171 Bacterial lipocalin signature 163 173 3.5E-41 T 28-03-2018 IPR002446 Lipocalin, bacterial GO:0005215 AM393_RS12690 20afe08ea2bcf6182d4fd74d2ca414fb 177 PRINTS PR01171 Bacterial lipocalin signature 136 147 3.5E-41 T 28-03-2018 IPR002446 Lipocalin, bacterial GO:0005215 AM393_RS12690 20afe08ea2bcf6182d4fd74d2ca414fb 177 ProSitePatterns PS00213 Lipocalin signature. 35 46 - T 28-03-2018 IPR022272 Lipocalin family conserved site AM393_RS05965 03de20628e4bdf4e4e006cee29279637 109 Gene3D G3DSA:1.20.120.290 12 55 0.027 T 28-03-2018 AM393_RS05965 03de20628e4bdf4e4e006cee29279637 109 Pfam PF05164 Cell division protein ZapA 6 90 6.9E-20 T 28-03-2018 IPR007838 Cell division protein ZapA-like AM393_RS05965 03de20628e4bdf4e4e006cee29279637 109 SUPERFAMILY SSF102829 6 94 1.96E-25 T 28-03-2018 IPR007838 Cell division protein ZapA-like AM393_RS05965 03de20628e4bdf4e4e006cee29279637 109 Hamap MF_02012 Cell division protein ZapA [zapA]. 1 109 37.852 T 28-03-2018 IPR023771 Cell division protein ZapA, eubacteria AM393_RS02675 6c42794abdf93465982adb6a3e632032 908 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 103 115 - T 28-03-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM393_RS02675 6c42794abdf93465982adb6a3e632032 908 Pfam PF01568 Molydopterin dinucleotide binding domain 828 901 1.3E-5 T 28-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 AM393_RS02675 6c42794abdf93465982adb6a3e632032 908 Gene3D G3DSA:3.10.20.30 1 154 8.6E-11 T 28-03-2018 IPR012675 Beta-grasp domain AM393_RS02675 6c42794abdf93465982adb6a3e632032 908 SUPERFAMILY SSF54292 1 77 1.09E-18 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AM393_RS02675 6c42794abdf93465982adb6a3e632032 908 Pfam PF00384 Molybdopterin oxidoreductase 554 638 1.1E-8 T 28-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM393_RS02675 6c42794abdf93465982adb6a3e632032 908 Gene3D G3DSA:2.40.40.20 824 902 5.6E-12 T 28-03-2018 AM393_RS02675 6c42794abdf93465982adb6a3e632032 908 SUPERFAMILY SSF53706 219 688 1.48E-84 T 28-03-2018 AM393_RS02675 6c42794abdf93465982adb6a3e632032 908 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 31 48 - T 28-03-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM393_RS02675 6c42794abdf93465982adb6a3e632032 908 Gene3D G3DSA:3.40.50.740 280 419 4.9E-10 T 28-03-2018 AM393_RS02675 6c42794abdf93465982adb6a3e632032 908 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 221 274 9.3E-11 T 28-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM393_RS02675 6c42794abdf93465982adb6a3e632032 908 SMART SM00929 88 128 1.9E-19 T 28-03-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM393_RS02675 6c42794abdf93465982adb6a3e632032 908 Gene3D G3DSA:2.20.25.90 235 275 6.8E-10 T 28-03-2018 AM393_RS02675 6c42794abdf93465982adb6a3e632032 908 SUPERFAMILY SSF50692 814 902 6.33E-13 T 28-03-2018 IPR009010 Aspartate decarboxylase-like domain AM393_RS02675 6c42794abdf93465982adb6a3e632032 908 Gene3D G3DSA:3.30.70.20 155 234 3.7E-4 T 28-03-2018 AM393_RS02675 6c42794abdf93465982adb6a3e632032 908 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 3 78 2.2E-11 T 28-03-2018 AM393_RS02675 6c42794abdf93465982adb6a3e632032 908 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 150 160 - T 28-03-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM393_RS02675 6c42794abdf93465982adb6a3e632032 908 SMART SM00926 221 275 3.3E-10 T 28-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM393_RS02675 6c42794abdf93465982adb6a3e632032 908 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 88 124 1.1E-14 T 28-03-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM393_RS02675 6c42794abdf93465982adb6a3e632032 908 SUPERFAMILY SSF54862 81 213 2.64E-34 T 28-03-2018 AM393_RS02675 6c42794abdf93465982adb6a3e632032 908 Gene3D G3DSA:3.40.50.740 460 702 1.1E-21 T 28-03-2018 AM393_RS02675 6c42794abdf93465982adb6a3e632032 908 TIGRFAM TIGR01973 NuoG: NADH dehydrogenase (quinone), G subunit 4 655 2.8E-204 T 28-03-2018 IPR010228 NADH:ubiquinone oxidoreductase, subunit G GO:0016651|GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM393_RS10740 6d59599e4a9a34b730bad5792fe8b7cc 145 SUPERFAMILY SSF69500 1 144 9.68E-57 T 28-03-2018 IPR023509 D-Tyr tRNAtyr deacylase-like domain AM393_RS10740 6d59599e4a9a34b730bad5792fe8b7cc 145 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 3 143 6.7E-55 T 28-03-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 AM393_RS10740 6d59599e4a9a34b730bad5792fe8b7cc 145 Gene3D G3DSA:3.50.80.10 1 145 1.1E-55 T 28-03-2018 IPR023509 D-Tyr tRNAtyr deacylase-like domain AM393_RS10740 6d59599e4a9a34b730bad5792fe8b7cc 145 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 1 145 6.2E-75 T 28-03-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 AM393_RS10740 6d59599e4a9a34b730bad5792fe8b7cc 145 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 145 34.876 T 28-03-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 AM393_RS27400 37b22dee13a2b2e0d12af988d8ce6c80 226 SUPERFAMILY SSF52172 1 177 4.38E-39 T 28-03-2018 IPR011006 CheY-like superfamily AM393_RS27400 37b22dee13a2b2e0d12af988d8ce6c80 226 TIGRFAM TIGR01387 cztR_silR_copR: heavy metal response regulator 3 221 3.5E-96 T 28-03-2018 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response GO:0003677|GO:0006355 AM393_RS27400 37b22dee13a2b2e0d12af988d8ce6c80 226 SMART SM00862 146 221 4.9E-25 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM393_RS27400 37b22dee13a2b2e0d12af988d8ce6c80 226 Gene3D G3DSA:3.40.50.2300 1 122 5.0E-33 T 28-03-2018 AM393_RS27400 37b22dee13a2b2e0d12af988d8ce6c80 226 Pfam PF00072 Response regulator receiver domain 3 113 2.0E-26 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM393_RS27400 37b22dee13a2b2e0d12af988d8ce6c80 226 Gene3D G3DSA:1.10.10.10 123 226 9.9E-30 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS27400 37b22dee13a2b2e0d12af988d8ce6c80 226 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 221 6.4E-25 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM393_RS27400 37b22dee13a2b2e0d12af988d8ce6c80 226 SMART SM00448 1 112 9.9E-41 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM393_RS05300 2667fdf03e27f05baaa8c2246046c998 338 Pfam PF03928 Haem-degrading 206 329 1.9E-27 T 28-03-2018 IPR005624 Haem-degrading AM393_RS05300 2667fdf03e27f05baaa8c2246046c998 338 SUPERFAMILY SSF143744 201 332 1.44E-36 T 28-03-2018 AM393_RS05300 2667fdf03e27f05baaa8c2246046c998 338 Gene3D G3DSA:3.40.50.970 170 288 0.002 T 28-03-2018 AM393_RS05300 2667fdf03e27f05baaa8c2246046c998 338 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 9 156 2.0E-58 T 28-03-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741 AM393_RS05300 2667fdf03e27f05baaa8c2246046c998 338 Gene3D G3DSA:1.20.1200.10 12 169 6.7E-49 T 28-03-2018 AM393_RS05300 2667fdf03e27f05baaa8c2246046c998 338 PIRSF PIRSF036411 1 335 9.2E-92 T 28-03-2018 IPR009221 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase, bifunctional PduO AM393_RS05300 2667fdf03e27f05baaa8c2246046c998 338 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 4 173 4.1E-50 T 28-03-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741 AM393_RS05300 2667fdf03e27f05baaa8c2246046c998 338 Pfam PF01923 Cobalamin adenosyltransferase 3 166 1.0E-51 T 28-03-2018 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741 AM393_RS05300 2667fdf03e27f05baaa8c2246046c998 338 SUPERFAMILY SSF89028 2 172 2.75E-52 T 28-03-2018 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741 AM393_RS00325 39d0375622db6bfd612235f7ba80ac68 93 ProDom PD030374 YCGL UNCHARACTERIZED SIMILAR BACTERIA HI1446 Y2231 HYDROLASE CYTOPLASMIC YPO2080 SO2575 1 82 6.0E-37 T 28-03-2018 IPR027354 YcgL domain AM393_RS00325 39d0375622db6bfd612235f7ba80ac68 93 Hamap MF_01866 Protein YcgL [ycgL]. 1 88 27.344 T 28-03-2018 IPR027354 YcgL domain AM393_RS00325 39d0375622db6bfd612235f7ba80ac68 93 SUPERFAMILY SSF160191 1 91 3.66E-40 T 28-03-2018 AM393_RS00325 39d0375622db6bfd612235f7ba80ac68 93 Pfam PF05166 YcgL domain 3 75 7.1E-33 T 28-03-2018 IPR027354 YcgL domain AM393_RS02840 f591275c773f354b8b8d7323535c68ee 306 Pfam PF01039 Carboxyl transferase domain 92 239 2.4E-16 T 28-03-2018 IPR034733 Acetyl-CoA carboxylase KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388|Reactome: R-HSA-196780 AM393_RS02840 f591275c773f354b8b8d7323535c68ee 306 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 281 4.9E-152 T 28-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AM393_RS02840 f591275c773f354b8b8d7323535c68ee 306 SUPERFAMILY SSF52096 23 280 4.97E-90 T 28-03-2018 IPR029045 ClpP/crotonase-like domain AM393_RS02840 f591275c773f354b8b8d7323535c68ee 306 Gene3D G3DSA:3.90.226.10 11 285 5.6E-72 T 28-03-2018 AM393_RS02840 f591275c773f354b8b8d7323535c68ee 306 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 279 39.043 T 28-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AM393_RS02840 f591275c773f354b8b8d7323535c68ee 306 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 227 238 3.4E-39 T 28-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AM393_RS02840 f591275c773f354b8b8d7323535c68ee 306 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 198 215 3.4E-39 T 28-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AM393_RS02840 f591275c773f354b8b8d7323535c68ee 306 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 161 179 3.4E-39 T 28-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AM393_RS02840 f591275c773f354b8b8d7323535c68ee 306 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 249 258 3.4E-39 T 28-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AM393_RS02840 f591275c773f354b8b8d7323535c68ee 306 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 127 141 3.4E-39 T 28-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AM393_RS11290 bdcb330a7afad6f8b0b200495cfe5dc6 367 Hamap MF_02030 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase [wecA]. 9 353 28.281 T 28-03-2018 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase GO:0000287|GO:0009103|GO:0009276|GO:0016021|GO:0016780|GO:0030145 MetaCyc: PWY-7290|MetaCyc: PWY-7530|MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7819 AM393_RS11290 bdcb330a7afad6f8b0b200495cfe5dc6 367 TIGRFAM TIGR02380 ECA_wecA: undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase 8 350 4.5E-167 T 28-03-2018 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase GO:0000287|GO:0009103|GO:0009276|GO:0016021|GO:0016780|GO:0030145 MetaCyc: PWY-7290|MetaCyc: PWY-7530|MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7819 AM393_RS11290 bdcb330a7afad6f8b0b200495cfe5dc6 367 Pfam PF00953 Glycosyl transferase family 4 76 232 7.8E-30 T 28-03-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193 AM393_RS06435 ccde37a60b9bb84b43a8b0583916a778 281 TIGRFAM TIGR03749 conj_TIGR03749: integrating conjugative element protein, PFL_4704 family 9 268 3.9E-102 T 28-03-2018 IPR021844 Integrating conjugative element protein, PFL4704 AM393_RS06435 ccde37a60b9bb84b43a8b0583916a778 281 Pfam PF11920 Protein of unknown function (DUF3438) 5 275 6.2E-111 T 28-03-2018 IPR021844 Integrating conjugative element protein, PFL4704 AM393_RS18985 45bca0bcefdeaf5b77944be3553ba131 429 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 242 279 - T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM393_RS18985 45bca0bcefdeaf5b77944be3553ba131 429 SUPERFAMILY SSF53383 1 422 3.74E-135 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM393_RS18985 45bca0bcefdeaf5b77944be3553ba131 429 Gene3D G3DSA:3.90.1150.10 260 424 1.3E-42 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM393_RS18985 45bca0bcefdeaf5b77944be3553ba131 429 Pfam PF00202 Aminotransferase class-III 26 420 1.9E-126 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM393_RS18985 45bca0bcefdeaf5b77944be3553ba131 429 Gene3D G3DSA:3.90.1150.10 4 169 1.4E-46 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM393_RS18985 45bca0bcefdeaf5b77944be3553ba131 429 PIRSF PIRSF000521 31 423 2.9E-25 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM393_RS18985 45bca0bcefdeaf5b77944be3553ba131 429 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 13 421 3.4E-180 T 28-03-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 AM393_RS18985 45bca0bcefdeaf5b77944be3553ba131 429 Hamap MF_00834 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [bioA]. 1 424 50.663 T 28-03-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 AM393_RS18985 45bca0bcefdeaf5b77944be3553ba131 429 Gene3D G3DSA:3.90.1150.10 191 259 0.013 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM393_RS10085 779771c35796974efb4a010887fae1b8 420 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 8 270 2.3E-61 T 28-03-2018 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 AM393_RS10085 779771c35796974efb4a010887fae1b8 420 Gene3D G3DSA:1.10.700.10 300 413 5.4E-39 T 28-03-2018 IPR011986 Extradiol ring-cleavage dioxygenase LigAB, LigA subunit AM393_RS10085 779771c35796974efb4a010887fae1b8 420 SUPERFAMILY SSF53213 2 296 1.83E-90 T 28-03-2018 AM393_RS10085 779771c35796974efb4a010887fae1b8 420 Gene3D G3DSA:3.40.830.10 3 274 4.2E-49 T 28-03-2018 AM393_RS10085 779771c35796974efb4a010887fae1b8 420 Pfam PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit 323 409 1.2E-33 T 28-03-2018 IPR011986 Extradiol ring-cleavage dioxygenase LigAB, LigA subunit AM393_RS10085 779771c35796974efb4a010887fae1b8 420 SUPERFAMILY SSF48076 294 419 4.71E-44 T 28-03-2018 IPR011986 Extradiol ring-cleavage dioxygenase LigAB, LigA subunit AM393_RS10000 94b837c5f8117253a1e306d855654013 215 Gene3D G3DSA:1.10.357.10 78 214 1.4E-12 T 28-03-2018 AM393_RS10000 94b837c5f8117253a1e306d855654013 215 Pfam PF00440 Bacterial regulatory proteins, tetR family 29 73 7.1E-13 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM393_RS10000 94b837c5f8117253a1e306d855654013 215 SUPERFAMILY SSF46689 18 95 3.18E-17 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS10000 94b837c5f8117253a1e306d855654013 215 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 29 42 3.3E-7 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM393_RS10000 94b837c5f8117253a1e306d855654013 215 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 50 73 3.3E-7 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM393_RS10000 94b837c5f8117253a1e306d855654013 215 Gene3D G3DSA:1.10.10.60 1 77 5.9E-20 T 28-03-2018 AM393_RS10000 94b837c5f8117253a1e306d855654013 215 SUPERFAMILY SSF48498 96 213 1.29E-13 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AM393_RS21625 a8c32f0f0f47bcfd88d150ba1a32b6d4 397 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 2 391 49.514 T 28-03-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AM393_RS21625 a8c32f0f0f47bcfd88d150ba1a32b6d4 397 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 8 389 6.3E-189 T 28-03-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AM393_RS21625 a8c32f0f0f47bcfd88d150ba1a32b6d4 397 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 52 375 4.4E-49 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AM393_RS21625 a8c32f0f0f47bcfd88d150ba1a32b6d4 397 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 80 94 - T 28-03-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AM393_RS21625 a8c32f0f0f47bcfd88d150ba1a32b6d4 397 Gene3D G3DSA:3.40.50.1100 9 192 1.5E-44 T 28-03-2018 AM393_RS21625 a8c32f0f0f47bcfd88d150ba1a32b6d4 397 PIRSF PIRSF001413 1 397 2.0E-172 T 28-03-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AM393_RS21625 a8c32f0f0f47bcfd88d150ba1a32b6d4 397 Gene3D G3DSA:3.40.50.1100 193 397 2.0E-37 T 28-03-2018 AM393_RS21625 a8c32f0f0f47bcfd88d150ba1a32b6d4 397 SUPERFAMILY SSF53686 6 390 1.44E-142 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AM393_RS25795 fdeef6e7d51d8117d22ac6ad96a2dda9 271 Gene3D G3DSA:1.10.3720.10 58 260 1.8E-25 T 28-03-2018 AM393_RS25795 fdeef6e7d51d8117d22ac6ad96a2dda9 271 SUPERFAMILY SSF161098 63 246 1.18E-26 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS25795 fdeef6e7d51d8117d22ac6ad96a2dda9 271 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 82 257 5.7E-25 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS04445 c650315913fc457d7a45577458724a11 187 TIGRFAM TIGR00821 EII-GUT: PTS system, glucitol/sorbitol-specific, IIC component 1 181 1.9E-110 T 28-03-2018 IPR004699 Phosphotransferase system, enzyme II sorbitol-specific factor GO:0009401|GO:0016021 AM393_RS04445 c650315913fc457d7a45577458724a11 187 PIRSF PIRSF038321 2 182 5.5E-88 T 28-03-2018 IPR004699 Phosphotransferase system, enzyme II sorbitol-specific factor GO:0009401|GO:0016021 AM393_RS04445 c650315913fc457d7a45577458724a11 187 Pfam PF03608 PTS system enzyme II sorbitol-specific factor 6 170 4.3E-76 T 28-03-2018 IPR004699 Phosphotransferase system, enzyme II sorbitol-specific factor GO:0009401|GO:0016021 AM393_RS01150 52ab207568acae8af0332bea576ae55e 460 SUPERFAMILY SSF47323 319 459 6.41E-35 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM393_RS01150 52ab207568acae8af0332bea576ae55e 460 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 2 458 7.8E-170 T 28-03-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 AM393_RS01150 52ab207568acae8af0332bea576ae55e 460 Gene3D G3DSA:1.20.120.640 306 391 5.7E-20 T 28-03-2018 AM393_RS01150 52ab207568acae8af0332bea576ae55e 460 Pfam PF09190 DALR domain 340 401 6.7E-23 T 28-03-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 AM393_RS01150 52ab207568acae8af0332bea576ae55e 460 Gene3D G3DSA:3.40.50.620 1 305 3.5E-91 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM393_RS01150 52ab207568acae8af0332bea576ae55e 460 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 2 460 37.223 T 28-03-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 AM393_RS01150 52ab207568acae8af0332bea576ae55e 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 61 70 2.6E-30 T 28-03-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 AM393_RS01150 52ab207568acae8af0332bea576ae55e 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 222 243 2.6E-30 T 28-03-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 AM393_RS01150 52ab207568acae8af0332bea576ae55e 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 25 36 2.6E-30 T 28-03-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 AM393_RS01150 52ab207568acae8af0332bea576ae55e 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 191 209 2.6E-30 T 28-03-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 AM393_RS01150 52ab207568acae8af0332bea576ae55e 460 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 16 312 7.3E-133 T 28-03-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 AM393_RS01150 52ab207568acae8af0332bea576ae55e 460 SMART SM00840 340 401 1.0E-26 T 28-03-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 AM393_RS01150 52ab207568acae8af0332bea576ae55e 460 SUPERFAMILY SSF52374 2 309 3.22E-97 T 28-03-2018 AM393_RS18000 7ad6c49ab218dbc1b695952699be8194 264 Pfam PF00005 ABC transporter 25 171 6.0E-33 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS18000 7ad6c49ab218dbc1b695952699be8194 264 SMART SM00382 32 229 7.0E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS18000 7ad6c49ab218dbc1b695952699be8194 264 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS18000 7ad6c49ab218dbc1b695952699be8194 264 SUPERFAMILY SSF52540 8 233 1.74E-58 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS18000 7ad6c49ab218dbc1b695952699be8194 264 Gene3D G3DSA:3.40.50.300 6 244 1.5E-57 T 28-03-2018 AM393_RS07775 7e83a2f8447b1a959eb026f7a47d4917 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 34.138 T 28-03-2018 IPR023035 Ribosomal protein S9, bacterial/plastid AM393_RS07775 7e83a2f8447b1a959eb026f7a47d4917 130 SUPERFAMILY SSF54211 5 130 1.59E-49 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM393_RS07775 7e83a2f8447b1a959eb026f7a47d4917 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 1.3E-46 T 28-03-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 AM393_RS07775 7e83a2f8447b1a959eb026f7a47d4917 130 Gene3D G3DSA:3.30.230.10 3 130 1.2E-52 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AM393_RS07775 7e83a2f8447b1a959eb026f7a47d4917 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 28-03-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 AM393_RS19155 9616c4c9eaded45caa8e82421ab738bf 330 SUPERFAMILY SSF52922 193 329 4.32E-31 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AM393_RS19155 9616c4c9eaded45caa8e82421ab738bf 330 SUPERFAMILY SSF52518 4 187 4.02E-48 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold AM393_RS19155 9616c4c9eaded45caa8e82421ab738bf 330 Gene3D G3DSA:3.40.50.970 4 198 7.6E-38 T 28-03-2018 AM393_RS19155 9616c4c9eaded45caa8e82421ab738bf 330 SMART SM00861 23 187 2.4E-42 T 28-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AM393_RS19155 9616c4c9eaded45caa8e82421ab738bf 330 Pfam PF02779 Transketolase, pyrimidine binding domain 27 186 4.2E-32 T 28-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AM393_RS19155 9616c4c9eaded45caa8e82421ab738bf 330 Pfam PF02780 Transketolase, C-terminal domain 199 321 1.5E-27 T 28-03-2018 IPR033248 Transketolase, C-terminal domain AM393_RS19155 9616c4c9eaded45caa8e82421ab738bf 330 Gene3D G3DSA:3.40.50.920 199 330 2.4E-32 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AM393_RS28835 f617c3a5aa6cfdafe95cd52a16b92b0b 160 SUPERFAMILY SSF53597 5 159 4.97E-43 T 28-03-2018 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 AM393_RS28835 f617c3a5aa6cfdafe95cd52a16b92b0b 160 Pfam PF00186 Dihydrofolate reductase 6 158 4.5E-39 T 28-03-2018 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0006545|GO:0009165|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 AM393_RS28835 f617c3a5aa6cfdafe95cd52a16b92b0b 160 Gene3D G3DSA:3.40.430.10 1 158 2.9E-32 T 28-03-2018 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 AM393_RS28835 f617c3a5aa6cfdafe95cd52a16b92b0b 160 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 17 39 - T 28-03-2018 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-1474151|Reactome: R-HSA-196757|Reactome: R-HSA-539107 AM393_RS28835 f617c3a5aa6cfdafe95cd52a16b92b0b 160 PRINTS PR00070 Dihydrofolate reductase signature 44 55 1.3E-11 T 28-03-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 AM393_RS28835 f617c3a5aa6cfdafe95cd52a16b92b0b 160 PRINTS PR00070 Dihydrofolate reductase signature 17 27 1.3E-11 T 28-03-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 AM393_RS28835 f617c3a5aa6cfdafe95cd52a16b92b0b 160 PRINTS PR00070 Dihydrofolate reductase signature 31 39 1.3E-11 T 28-03-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 AM393_RS28835 f617c3a5aa6cfdafe95cd52a16b92b0b 160 PRINTS PR00070 Dihydrofolate reductase signature 96 110 1.3E-11 T 28-03-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 AM393_RS22495 d394e92f1555522c02baed91fd873c5e 399 PRINTS PR00799 Aspartate aminotransferase signature 342 360 1.2E-36 T 28-03-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AM393_RS22495 d394e92f1555522c02baed91fd873c5e 399 PRINTS PR00799 Aspartate aminotransferase signature 176 195 1.2E-36 T 28-03-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AM393_RS22495 d394e92f1555522c02baed91fd873c5e 399 PRINTS PR00799 Aspartate aminotransferase signature 274 299 1.2E-36 T 28-03-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AM393_RS22495 d394e92f1555522c02baed91fd873c5e 399 PRINTS PR00799 Aspartate aminotransferase signature 207 219 1.2E-36 T 28-03-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AM393_RS22495 d394e92f1555522c02baed91fd873c5e 399 Pfam PF00155 Aminotransferase class I and II 27 392 1.9E-79 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AM393_RS22495 d394e92f1555522c02baed91fd873c5e 399 Gene3D G3DSA:3.40.640.10 69 295 2.5E-28 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM393_RS22495 d394e92f1555522c02baed91fd873c5e 399 SUPERFAMILY SSF53383 1 399 9.11E-120 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM393_RS22495 d394e92f1555522c02baed91fd873c5e 399 Gene3D G3DSA:3.90.1150.10 296 399 5.6E-26 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM393_RS22495 d394e92f1555522c02baed91fd873c5e 399 Gene3D G3DSA:3.90.1150.10 1 68 7.8E-12 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM393_RS22495 d394e92f1555522c02baed91fd873c5e 399 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 244 257 - T 28-03-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 AM393_RS06610 dc5e26b039fa71f327d4525b53d1c590 382 Gene3D G3DSA:3.90.1150.10 248 382 4.4E-52 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM393_RS06610 dc5e26b039fa71f327d4525b53d1c590 382 PIRSF PIRSF001434 1 382 5.7E-138 T 28-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AM393_RS06610 dc5e26b039fa71f327d4525b53d1c590 382 Gene3D G3DSA:3.40.640.10 2 247 1.6E-55 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM393_RS06610 dc5e26b039fa71f327d4525b53d1c590 382 SUPERFAMILY SSF53383 13 380 2.86E-112 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM393_RS06610 dc5e26b039fa71f327d4525b53d1c590 382 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 6 379 9.4E-143 T 28-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AM393_RS06610 dc5e26b039fa71f327d4525b53d1c590 382 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 188 202 - T 28-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AM393_RS19730 f804c848ecdc17b963b62dc91a9ff037 490 Gene3D G3DSA:3.30.450.20 29 163 1.5E-9 T 28-03-2018 AM393_RS19730 f804c848ecdc17b963b62dc91a9ff037 490 Gene3D G3DSA:3.30.565.10 340 490 5.6E-36 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS19730 f804c848ecdc17b963b62dc91a9ff037 490 Gene3D G3DSA:1.10.287.130 259 332 3.3E-16 T 28-03-2018 AM393_RS19730 f804c848ecdc17b963b62dc91a9ff037 490 SUPERFAMILY SSF55874 326 490 2.49E-34 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS19730 f804c848ecdc17b963b62dc91a9ff037 490 Pfam PF00512 His Kinase A (phospho-acceptor) domain 269 336 1.1E-17 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM393_RS19730 f804c848ecdc17b963b62dc91a9ff037 490 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 433 3.0E-8 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM393_RS19730 f804c848ecdc17b963b62dc91a9ff037 490 PRINTS PR00344 Bacterial sensor protein C-terminal signature 453 471 3.0E-8 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM393_RS19730 f804c848ecdc17b963b62dc91a9ff037 490 PRINTS PR00344 Bacterial sensor protein C-terminal signature 476 489 3.0E-8 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM393_RS19730 f804c848ecdc17b963b62dc91a9ff037 490 SMART SM00388 268 336 2.2E-19 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM393_RS19730 f804c848ecdc17b963b62dc91a9ff037 490 SMART SM00387 382 490 1.1E-22 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS19730 f804c848ecdc17b963b62dc91a9ff037 490 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 384 490 4.8E-17 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS19730 f804c848ecdc17b963b62dc91a9ff037 490 SUPERFAMILY SSF47384 251 337 6.08E-19 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM393_RS26825 2d10f839f46c6566cbdf45bc05360a90 282 Pfam PF13847 Methyltransferase domain 110 246 1.9E-21 T 28-03-2018 IPR025714 Methyltransferase domain AM393_RS26825 2d10f839f46c6566cbdf45bc05360a90 282 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 180 186 - T 28-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AM393_RS26825 2d10f839f46c6566cbdf45bc05360a90 282 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 2 275 5.1E-94 T 28-03-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 AM393_RS26825 2d10f839f46c6566cbdf45bc05360a90 282 Gene3D G3DSA:1.10.8.10 1 84 6.1E-23 T 28-03-2018 AM393_RS26825 2d10f839f46c6566cbdf45bc05360a90 282 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 3 275 46.499 T 28-03-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 AM393_RS26825 2d10f839f46c6566cbdf45bc05360a90 282 SUPERFAMILY SSF53335 4 273 2.2E-62 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM393_RS26825 2d10f839f46c6566cbdf45bc05360a90 282 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 23 271 8.6E-91 T 28-03-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 AM393_RS26825 2d10f839f46c6566cbdf45bc05360a90 282 Gene3D G3DSA:3.40.50.150 85 276 5.9E-48 T 28-03-2018 AM393_RS24940 1445ae5f4e02bc350d75d61fb5f0fe1d 231 TIGRFAM TIGR00684 narJ: nitrate reductase molybdenum cofactor assembly chaperone 9 154 5.5E-36 T 28-03-2018 IPR003765 Nitrate reductase chaperone, NarJ GO:0051082|GO:0051131 AM393_RS24940 1445ae5f4e02bc350d75d61fb5f0fe1d 231 Pfam PF02613 Nitrate reductase delta subunit 44 151 2.7E-11 T 28-03-2018 IPR020945 DMSO/Nitrate reductase chaperone AM393_RS24940 1445ae5f4e02bc350d75d61fb5f0fe1d 231 Gene3D G3DSA:1.10.3480.10 17 219 9.4E-33 T 28-03-2018 IPR020945 DMSO/Nitrate reductase chaperone AM393_RS24940 1445ae5f4e02bc350d75d61fb5f0fe1d 231 SUPERFAMILY SSF89155 2 157 4.71E-31 T 28-03-2018 IPR020945 DMSO/Nitrate reductase chaperone AM393_RS09360 b1b827b0892532b9c74ff130d56a1c7f 323 SUPERFAMILY SSF52283 1 134 3.02E-28 T 28-03-2018 AM393_RS09360 b1b827b0892532b9c74ff130d56a1c7f 323 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 5 319 1.3E-29 T 28-03-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 AM393_RS09360 b1b827b0892532b9c74ff130d56a1c7f 323 Gene3D G3DSA:3.40.50.720 1 113 6.4E-28 T 28-03-2018 AM393_RS09360 b1b827b0892532b9c74ff130d56a1c7f 323 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 226 242 - T 28-03-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AM393_RS09360 b1b827b0892532b9c74ff130d56a1c7f 323 SUPERFAMILY SSF51735 100 288 6.7E-59 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS09360 b1b827b0892532b9c74ff130d56a1c7f 323 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 197 219 - T 28-03-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AM393_RS09360 b1b827b0892532b9c74ff130d56a1c7f 323 Hamap MF_01667 Glyoxylate/hydroxypyruvate reductase B [ghrB]. 1 323 70.443 T 28-03-2018 IPR023756 Glyoxylate/hydroxypyruvate reductase B GO:0016618|GO:0030267|GO:0055114 KEGG: 00260+1.1.1.81|KEGG: 00620+1.1.1.79|KEGG: 00630+1.1.1.79+1.1.1.81|MetaCyc: PWY-1622 AM393_RS09360 b1b827b0892532b9c74ff130d56a1c7f 323 Gene3D G3DSA:3.40.50.720 114 290 1.2E-57 T 28-03-2018 AM393_RS09360 b1b827b0892532b9c74ff130d56a1c7f 323 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 108 287 4.3E-63 T 28-03-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AM393_RS06085 972fa0a5c98eddfe8afb338793a7a707 262 Gene3D G3DSA:1.10.10.10 1 72 8.4E-10 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS06085 972fa0a5c98eddfe8afb338793a7a707 262 SUPERFAMILY SSF55781 77 258 2.49E-40 T 28-03-2018 IPR029016 GAF domain-like AM393_RS06085 972fa0a5c98eddfe8afb338793a7a707 262 Pfam PF01614 Bacterial transcriptional regulator 132 252 4.0E-20 T 28-03-2018 IPR014757 Transcription regulator IclR, C-terminal AM393_RS06085 972fa0a5c98eddfe8afb338793a7a707 262 Pfam PF09339 IclR helix-turn-helix domain 14 63 1.7E-15 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AM393_RS06085 972fa0a5c98eddfe8afb338793a7a707 262 Gene3D G3DSA:3.30.450.40 79 262 5.1E-41 T 28-03-2018 IPR029016 GAF domain-like AM393_RS06085 972fa0a5c98eddfe8afb338793a7a707 262 SUPERFAMILY SSF46785 11 84 7.94E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS06085 972fa0a5c98eddfe8afb338793a7a707 262 SMART SM00346 11 101 7.2E-28 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AM393_RS10345 8475e44bcbd98ce0409a2773c2decc9c 270 Gene3D G3DSA:3.40.50.1000 1 270 2.6E-48 T 28-03-2018 IPR023214 HAD-like domain AM393_RS10345 8475e44bcbd98ce0409a2773c2decc9c 270 ProSitePatterns PS01228 Hypothetical cof family signature 1. 5 16 - T 28-03-2018 AM393_RS10345 8475e44bcbd98ce0409a2773c2decc9c 270 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 264 9.6E-67 T 28-03-2018 IPR023214 HAD-like domain AM393_RS10345 8475e44bcbd98ce0409a2773c2decc9c 270 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 237 4.1E-32 T 28-03-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 AM393_RS10345 8475e44bcbd98ce0409a2773c2decc9c 270 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 264 4.1E-75 T 28-03-2018 IPR000150 Cof family GO:0016787 AM393_RS10345 8475e44bcbd98ce0409a2773c2decc9c 270 SUPERFAMILY SSF56784 1 269 8.94E-76 T 28-03-2018 IPR023214 HAD-like domain AM393_RS10345 8475e44bcbd98ce0409a2773c2decc9c 270 ProSitePatterns PS01229 Hypothetical cof family signature 2. 218 240 - T 28-03-2018 AM393_RS26835 b59048b88fb44521e68b4f4488c39b60 418 SUPERFAMILY SSF69075 317 417 5.89E-28 T 28-03-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AM393_RS26835 b59048b88fb44521e68b4f4488c39b60 418 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 156 8.4E-48 T 28-03-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AM393_RS26835 b59048b88fb44521e68b4f4488c39b60 418 SUPERFAMILY SSF51735 162 315 2.16E-36 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS26835 b59048b88fb44521e68b4f4488c39b60 418 SUPERFAMILY SSF69742 1 158 1.96E-45 T 28-03-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AM393_RS26835 b59048b88fb44521e68b4f4488c39b60 418 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 172 306 4.0E-50 T 28-03-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase AM393_RS26835 b59048b88fb44521e68b4f4488c39b60 418 PIRSF PIRSF000445 1 418 2.2E-156 T 28-03-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AM393_RS26835 b59048b88fb44521e68b4f4488c39b60 418 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 99 122 - T 28-03-2018 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AM393_RS26835 b59048b88fb44521e68b4f4488c39b60 418 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 320 416 9.6E-25 T 28-03-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AM393_RS26835 b59048b88fb44521e68b4f4488c39b60 418 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 418 31.11 T 28-03-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AM393_RS26835 b59048b88fb44521e68b4f4488c39b60 418 Gene3D G3DSA:3.40.50.720 161 313 3.9E-25 T 28-03-2018 AM393_RS26835 b59048b88fb44521e68b4f4488c39b60 418 Gene3D G3DSA:1.10.1200.70 332 418 2.3E-23 T 28-03-2018 AM393_RS26835 b59048b88fb44521e68b4f4488c39b60 418 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 418 1.1E-165 T 28-03-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AM393_RS13215 7f764fcf4997bbaa69c57a1cfa009ed7 902 SUPERFAMILY SSF56784 536 687 1.67E-37 T 28-03-2018 IPR023214 HAD-like domain AM393_RS13215 7f764fcf4997bbaa69c57a1cfa009ed7 902 Gene3D G3DSA:1.20.1110.10 563 898 1.9E-57 T 28-03-2018 AM393_RS13215 7f764fcf4997bbaa69c57a1cfa009ed7 902 SUPERFAMILY SSF81653 172 274 1.57E-27 T 28-03-2018 IPR008250 P-type ATPase, A domain Reactome: R-HSA-936837 AM393_RS13215 7f764fcf4997bbaa69c57a1cfa009ed7 902 TIGRFAM TIGR01524 ATPase-IIIB_Mg: magnesium-translocating P-type ATPase 39 902 0.0 T 28-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 AM393_RS13215 7f764fcf4997bbaa69c57a1cfa009ed7 902 SUPERFAMILY SSF81660 370 551 3.49E-40 T 28-03-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 AM393_RS13215 7f764fcf4997bbaa69c57a1cfa009ed7 902 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 377 383 - T 28-03-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 AM393_RS13215 7f764fcf4997bbaa69c57a1cfa009ed7 902 Pfam PF00122 E1-E2 ATPase 161 355 4.2E-45 T 28-03-2018 AM393_RS13215 7f764fcf4997bbaa69c57a1cfa009ed7 902 Pfam PF00702 haloacid dehalogenase-like hydrolase 371 657 2.2E-18 T 28-03-2018 AM393_RS13215 7f764fcf4997bbaa69c57a1cfa009ed7 902 Gene3D G3DSA:2.70.150.10 59 276 3.3E-41 T 28-03-2018 AM393_RS13215 7f764fcf4997bbaa69c57a1cfa009ed7 902 SMART SM00831 48 121 9.0E-9 T 28-03-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 AM393_RS13215 7f764fcf4997bbaa69c57a1cfa009ed7 902 Gene3D G3DSA:3.40.1110.10 332 550 5.0E-39 T 28-03-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 AM393_RS13215 7f764fcf4997bbaa69c57a1cfa009ed7 902 Pfam PF00690 Cation transporter/ATPase, N-terminus 51 116 5.5E-15 T 28-03-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 AM393_RS13215 7f764fcf4997bbaa69c57a1cfa009ed7 902 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 127 408 1.7E-35 T 28-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AM393_RS13215 7f764fcf4997bbaa69c57a1cfa009ed7 902 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 610 732 2.6E-31 T 28-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AM393_RS13215 7f764fcf4997bbaa69c57a1cfa009ed7 902 PRINTS PR01836 Magnesium-transporting ATPase signature 751 764 8.5E-86 T 28-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 AM393_RS13215 7f764fcf4997bbaa69c57a1cfa009ed7 902 PRINTS PR01836 Magnesium-transporting ATPase signature 806 827 8.5E-86 T 28-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 AM393_RS13215 7f764fcf4997bbaa69c57a1cfa009ed7 902 PRINTS PR01836 Magnesium-transporting ATPase signature 856 877 8.5E-86 T 28-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 AM393_RS13215 7f764fcf4997bbaa69c57a1cfa009ed7 902 PRINTS PR01836 Magnesium-transporting ATPase signature 305 324 8.5E-86 T 28-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 AM393_RS13215 7f764fcf4997bbaa69c57a1cfa009ed7 902 PRINTS PR01836 Magnesium-transporting ATPase signature 771 787 8.5E-86 T 28-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 AM393_RS13215 7f764fcf4997bbaa69c57a1cfa009ed7 902 PRINTS PR01836 Magnesium-transporting ATPase signature 288 304 8.5E-86 T 28-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 AM393_RS13215 7f764fcf4997bbaa69c57a1cfa009ed7 902 PRINTS PR01836 Magnesium-transporting ATPase signature 701 716 8.5E-86 T 28-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 AM393_RS13215 7f764fcf4997bbaa69c57a1cfa009ed7 902 PRINTS PR01836 Magnesium-transporting ATPase signature 409 422 8.5E-86 T 28-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 AM393_RS13215 7f764fcf4997bbaa69c57a1cfa009ed7 902 PRINTS PR01836 Magnesium-transporting ATPase signature 719 730 8.5E-86 T 28-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 AM393_RS13215 7f764fcf4997bbaa69c57a1cfa009ed7 902 SUPERFAMILY SSF81665 276 369 2.09E-102 T 28-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 AM393_RS13215 7f764fcf4997bbaa69c57a1cfa009ed7 902 SUPERFAMILY SSF81665 692 900 2.09E-102 T 28-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 AM393_RS13215 7f764fcf4997bbaa69c57a1cfa009ed7 902 SUPERFAMILY SSF81665 49 159 2.09E-102 T 28-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 AM393_RS13215 7f764fcf4997bbaa69c57a1cfa009ed7 902 Pfam PF00689 Cation transporting ATPase, C-terminus 726 892 7.8E-14 T 28-03-2018 IPR006068 Cation-transporting P-type ATPase, C-terminal Reactome: R-HSA-936837 AM393_RS11130 4e84e9d70200045beda57ccac821372d 612 Gene3D G3DSA:2.40.170.20 152 612 2.9E-63 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM393_RS11130 4e84e9d70200045beda57ccac821372d 612 SUPERFAMILY SSF56935 26 612 1.07E-110 T 28-03-2018 AM393_RS11130 4e84e9d70200045beda57ccac821372d 612 TIGRFAM TIGR01779 TonB-B12: TonB-dependent vitamin B12 receptor 2 612 4.1E-203 T 28-03-2018 IPR010101 TonB-dependent vitamin B12 transporter BtuB GO:0004872|GO:0015235|GO:0015889|GO:0016020 AM393_RS11130 4e84e9d70200045beda57ccac821372d 612 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 595 612 - T 28-03-2018 IPR010917 TonB-dependent receptor, conserved site AM393_RS11130 4e84e9d70200045beda57ccac821372d 612 Pfam PF07715 TonB-dependent Receptor Plug Domain 41 146 6.4E-28 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM393_RS11130 4e84e9d70200045beda57ccac821372d 612 Hamap MF_01531 Vitamin B12 transporter BtuB [btuB]. 2 612 35.073 T 28-03-2018 IPR010101 TonB-dependent vitamin B12 transporter BtuB GO:0004872|GO:0015235|GO:0015889|GO:0016020 AM393_RS11130 4e84e9d70200045beda57ccac821372d 612 Gene3D G3DSA:2.170.130.10 19 151 3.2E-33 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM393_RS11130 4e84e9d70200045beda57ccac821372d 612 Pfam PF00593 TonB dependent receptor 170 611 3.2E-39 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM393_RS11130 4e84e9d70200045beda57ccac821372d 612 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 33 - T 28-03-2018 IPR010916 TonB box, conserved site AM393_RS04520 4e65acb02c6751975c1a820b3219a4b3 480 Gene3D G3DSA:3.30.1360.60 6 82 1.8E-27 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AM393_RS04520 4e65acb02c6751975c1a820b3219a4b3 480 Pfam PF00367 phosphotransferase system, EIIB 10 43 3.8E-16 T 28-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AM393_RS04520 4e65acb02c6751975c1a820b3219a4b3 480 Pfam PF02378 Phosphotransferase system, EIIC 113 396 2.0E-40 T 28-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AM393_RS04520 4e65acb02c6751975c1a820b3219a4b3 480 SUPERFAMILY SSF55604 8 82 9.81E-23 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AM393_RS04520 4e65acb02c6751975c1a820b3219a4b3 480 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 21 38 - T 28-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AM393_RS15140 f835cdad65aa0bc06729018ba700047e 266 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 132 149 4.5E-26 T 28-03-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial AM393_RS15140 f835cdad65aa0bc06729018ba700047e 266 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 200 211 4.5E-26 T 28-03-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial AM393_RS15140 f835cdad65aa0bc06729018ba700047e 266 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 189 199 4.5E-26 T 28-03-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial AM393_RS15140 f835cdad65aa0bc06729018ba700047e 266 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 212 227 4.5E-26 T 28-03-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial AM393_RS15140 f835cdad65aa0bc06729018ba700047e 266 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 21 109 3.5E-29 T 28-03-2018 IPR010627 Peptidase A24A, N-terminal AM393_RS15140 f835cdad65aa0bc06729018ba700047e 266 Pfam PF01478 Type IV leader peptidase family 123 231 4.2E-25 T 28-03-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 AM393_RS20140 a858b4c8915fc25e9f9bb7b10bdf9ba9 320 Gene3D G3DSA:3.40.190.10 25 129 4.8E-17 T 28-03-2018 AM393_RS20140 a858b4c8915fc25e9f9bb7b10bdf9ba9 320 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 30 310 6.6E-84 T 28-03-2018 IPR010067 Aliphatic sulfonates-binding protein GO:0016020|GO:0042626 AM393_RS20140 a858b4c8915fc25e9f9bb7b10bdf9ba9 320 SMART SM00062 29 254 4.2E-29 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM393_RS20140 a858b4c8915fc25e9f9bb7b10bdf9ba9 320 Gene3D G3DSA:3.40.190.10 130 316 2.3E-36 T 28-03-2018 AM393_RS20140 a858b4c8915fc25e9f9bb7b10bdf9ba9 320 SUPERFAMILY SSF53850 29 307 4.54E-51 T 28-03-2018 AM393_RS20140 a858b4c8915fc25e9f9bb7b10bdf9ba9 320 Pfam PF09084 NMT1/THI5 like 66 183 1.1E-11 T 28-03-2018 IPR015168 SsuA/THI5-like AM393_RS09690 892efc0112327906b910696f98bd7b46 269 SMART SM01232 129 221 2.2E-48 T 28-03-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 AM393_RS09690 892efc0112327906b910696f98bd7b46 269 SUPERFAMILY SSF57716 217 269 1.4E-16 T 28-03-2018 AM393_RS09690 892efc0112327906b910696f98bd7b46 269 Pfam PF06827 Zinc finger found in FPG and IleRS 241 269 7.5E-8 T 28-03-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 AM393_RS09690 892efc0112327906b910696f98bd7b46 269 ProSitePatterns PS01242 Zinc finger FPG-type signature. 244 268 - T 28-03-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 AM393_RS09690 892efc0112327906b910696f98bd7b46 269 Gene3D G3DSA:1.10.8.50 131 269 1.0E-50 T 28-03-2018 AM393_RS09690 892efc0112327906b910696f98bd7b46 269 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 114 8.6E-32 T 28-03-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 AM393_RS09690 892efc0112327906b910696f98bd7b46 269 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 129 218 1.4E-31 T 28-03-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 AM393_RS09690 892efc0112327906b910696f98bd7b46 269 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 268 9.2E-106 T 28-03-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 AM393_RS09690 892efc0112327906b910696f98bd7b46 269 SUPERFAMILY SSF46946 130 222 5.1E-31 T 28-03-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 AM393_RS09690 892efc0112327906b910696f98bd7b46 269 SMART SM00898 2 115 1.7E-53 T 28-03-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 AM393_RS09690 892efc0112327906b910696f98bd7b46 269 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 269 44.501 T 28-03-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 AM393_RS09690 892efc0112327906b910696f98bd7b46 269 Gene3D G3DSA:3.20.190.10 1 130 1.3E-37 T 28-03-2018 AM393_RS09690 892efc0112327906b910696f98bd7b46 269 SUPERFAMILY SSF81624 2 138 1.03E-43 T 28-03-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 AM393_RS26125 1e42f39179a246222a2ad25d294343da 690 SUPERFAMILY SSF56935 12 690 4.97E-124 T 28-03-2018 AM393_RS26125 1e42f39179a246222a2ad25d294343da 690 Pfam PF00593 TonB dependent receptor 224 688 1.3E-62 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM393_RS26125 1e42f39179a246222a2ad25d294343da 690 Gene3D G3DSA:2.170.130.10 6 153 2.7E-21 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM393_RS26125 1e42f39179a246222a2ad25d294343da 690 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 673 690 - T 28-03-2018 IPR010917 TonB-dependent receptor, conserved site AM393_RS26125 1e42f39179a246222a2ad25d294343da 690 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 50 690 6.6E-111 T 28-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AM393_RS26125 1e42f39179a246222a2ad25d294343da 690 Pfam PF07715 TonB-dependent Receptor Plug Domain 49 145 4.2E-14 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM393_RS26125 1e42f39179a246222a2ad25d294343da 690 Gene3D G3DSA:2.40.170.20 154 690 3.3E-86 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM393_RS01830 e80c42dc8f8969cefe092542bc503e62 527 SMART SM01091 439 518 1.5E-27 T 28-03-2018 IPR005170 Transporter-associated domain AM393_RS01830 e80c42dc8f8969cefe092542bc503e62 527 Pfam PF00571 CBS domain 302 358 0.0012 T 28-03-2018 IPR000644 CBS domain AM393_RS01830 e80c42dc8f8969cefe092542bc503e62 527 Pfam PF00571 CBS domain 373 422 1.0E-7 T 28-03-2018 IPR000644 CBS domain AM393_RS01830 e80c42dc8f8969cefe092542bc503e62 527 Pfam PF03471 Transporter associated domain 441 515 5.9E-20 T 28-03-2018 IPR005170 Transporter-associated domain AM393_RS01830 e80c42dc8f8969cefe092542bc503e62 527 SUPERFAMILY SSF56176 437 521 9.54E-23 T 28-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AM393_RS01830 e80c42dc8f8969cefe092542bc503e62 527 SUPERFAMILY SSF54631 291 431 1.77E-25 T 28-03-2018 AM393_RS01830 e80c42dc8f8969cefe092542bc503e62 527 Gene3D G3DSA:3.30.465.10 434 516 9.9E-24 T 28-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AM393_RS01830 e80c42dc8f8969cefe092542bc503e62 527 Gene3D G3DSA:3.10.580.10 283 433 1.2E-25 T 28-03-2018 AM393_RS01830 e80c42dc8f8969cefe092542bc503e62 527 Pfam PF03741 Integral membrane protein TerC family 14 203 3.4E-50 T 28-03-2018 IPR005496 Integral membrane protein TerC GO:0016021 AM393_RS02485 6183dea067f1b4b1003ac579f393a46f 216 SUPERFAMILY SSF52172 3 135 3.98E-21 T 28-03-2018 IPR011006 CheY-like superfamily AM393_RS02485 6183dea067f1b4b1003ac579f393a46f 216 Pfam PF00072 Response regulator receiver domain 6 120 1.0E-24 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM393_RS02485 6183dea067f1b4b1003ac579f393a46f 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 151 165 4.0E-8 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS02485 6183dea067f1b4b1003ac579f393a46f 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 181 4.0E-8 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS02485 6183dea067f1b4b1003ac579f393a46f 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 193 4.0E-8 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS02485 6183dea067f1b4b1003ac579f393a46f 216 SUPERFAMILY SSF46894 142 207 1.73E-16 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM393_RS02485 6183dea067f1b4b1003ac579f393a46f 216 Gene3D G3DSA:3.40.50.2300 3 131 1.4E-21 T 28-03-2018 AM393_RS02485 6183dea067f1b4b1003ac579f393a46f 216 Hamap MF_00981 Transcriptional regulatory protein RcsB [rcsB]. 1 214 51.921 T 28-03-2018 IPR030864 Transcriptional regulatory protein RcsB GO:0000160|GO:0006355 AM393_RS02485 6183dea067f1b4b1003ac579f393a46f 216 SMART SM00448 4 120 5.1E-15 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM393_RS02485 6183dea067f1b4b1003ac579f393a46f 216 SMART SM00421 148 205 4.2E-16 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS02485 6183dea067f1b4b1003ac579f393a46f 216 Gene3D G3DSA:1.10.10.10 132 215 1.1E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS02485 6183dea067f1b4b1003ac579f393a46f 216 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 204 1.1E-18 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS02485 6183dea067f1b4b1003ac579f393a46f 216 ProSitePatterns PS00622 LuxR-type HTH domain signature. 165 192 - T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS26140 6a1fdfe2bcf00bdd742019ba3e601d57 345 Pfam PF13379 NMT1-like family 47 273 5.9E-17 T 28-03-2018 AM393_RS26140 6a1fdfe2bcf00bdd742019ba3e601d57 345 Gene3D G3DSA:3.40.190.10 148 345 2.9E-22 T 28-03-2018 AM393_RS26140 6a1fdfe2bcf00bdd742019ba3e601d57 345 Gene3D G3DSA:3.40.190.10 47 145 3.7E-13 T 28-03-2018 AM393_RS26140 6a1fdfe2bcf00bdd742019ba3e601d57 345 SUPERFAMILY SSF53850 49 276 2.65E-35 T 28-03-2018 AM393_RS12885 9563ca828bae63a7e2f8e402bf34de43 466 Pfam PF03611 PTS system sugar-specific permease component 15 410 1.5E-121 T 28-03-2018 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 AM393_RS20360 471116f1e08ac4b514002449ceb9ded9 495 Gene3D G3DSA:3.40.309.10 283 475 7.5E-67 T 28-03-2018 AM393_RS20360 471116f1e08ac4b514002449ceb9ded9 495 Gene3D G3DSA:3.40.605.10 6 282 1.9E-102 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AM393_RS20360 471116f1e08ac4b514002449ceb9ded9 495 Pfam PF00171 Aldehyde dehydrogenase family 33 489 1.3E-171 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AM393_RS20360 471116f1e08ac4b514002449ceb9ded9 495 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 266 273 - T 28-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 AM393_RS20360 471116f1e08ac4b514002449ceb9ded9 495 SUPERFAMILY SSF53720 9 491 1.13E-166 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AM393_RS20360 471116f1e08ac4b514002449ceb9ded9 495 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 295 306 - T 28-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 AM393_RS08325 ba5d5c50e8abc816c84ba4851d83c791 209 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 3 204 4.2E-92 T 28-03-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS08325 ba5d5c50e8abc816c84ba4851d83c791 209 Pfam PF00297 Ribosomal protein L3 26 182 1.8E-14 T 28-03-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM393_RS08325 ba5d5c50e8abc816c84ba4851d83c791 209 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 1 207 40.675 T 28-03-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS08325 ba5d5c50e8abc816c84ba4851d83c791 209 ProSitePatterns PS00474 Ribosomal protein L3 signature. 101 124 - T 28-03-2018 IPR019926 Ribosomal protein L3, conserved site AM393_RS08325 ba5d5c50e8abc816c84ba4851d83c791 209 SUPERFAMILY SSF50447 1 208 3.27E-80 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain AM393_RS08325 ba5d5c50e8abc816c84ba4851d83c791 209 Gene3D G3DSA:4.10.960.10 57 165 6.7E-35 T 28-03-2018 AM393_RS26505 20df5d680474fb1f7207dd5ef44a9cdd 795 Pfam PF03483 B3/4 domain 212 385 1.0E-71 T 28-03-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 AM393_RS26505 20df5d680474fb1f7207dd5ef44a9cdd 795 SUPERFAMILY SSF50249 35 197 3.92E-52 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM393_RS26505 20df5d680474fb1f7207dd5ef44a9cdd 795 SMART SM00896 701 794 1.7E-44 T 28-03-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 AM393_RS26505 20df5d680474fb1f7207dd5ef44a9cdd 795 Pfam PF03484 tRNA synthetase B5 domain 406 471 4.5E-21 T 28-03-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 AM393_RS26505 20df5d680474fb1f7207dd5ef44a9cdd 795 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 794 1.3E-296 T 28-03-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 AM393_RS26505 20df5d680474fb1f7207dd5ef44a9cdd 795 Gene3D G3DSA:3.30.70.380 698 794 5.3E-23 T 28-03-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 AM393_RS26505 20df5d680474fb1f7207dd5ef44a9cdd 795 Pfam PF03147 Ferredoxin-fold anticodon binding domain 701 794 1.3E-27 T 28-03-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 AM393_RS26505 20df5d680474fb1f7207dd5ef44a9cdd 795 Gene3D G3DSA:2.40.50.140 54 140 5.9E-45 T 28-03-2018 AM393_RS26505 20df5d680474fb1f7207dd5ef44a9cdd 795 SUPERFAMILY SSF55681 467 690 2.78E-54 T 28-03-2018 AM393_RS26505 20df5d680474fb1f7207dd5ef44a9cdd 795 SUPERFAMILY SSF54991 696 794 4.32E-30 T 28-03-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 AM393_RS26505 20df5d680474fb1f7207dd5ef44a9cdd 795 SUPERFAMILY SSF46955 404 475 5.49E-21 T 28-03-2018 IPR009061 Putative DNA-binding domain AM393_RS26505 20df5d680474fb1f7207dd5ef44a9cdd 795 SMART SM00873 212 385 8.0E-101 T 28-03-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 AM393_RS26505 20df5d680474fb1f7207dd5ef44a9cdd 795 Gene3D G3DSA:3.30.56.10 401 475 1.6E-25 T 28-03-2018 AM393_RS26505 20df5d680474fb1f7207dd5ef44a9cdd 795 Gene3D G3DSA:3.30.56.10 1 53 6.3E-12 T 28-03-2018 AM393_RS26505 20df5d680474fb1f7207dd5ef44a9cdd 795 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 788 49.273 T 28-03-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 AM393_RS26505 20df5d680474fb1f7207dd5ef44a9cdd 795 SUPERFAMILY SSF56037 195 396 1.57E-78 T 28-03-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 AM393_RS26505 20df5d680474fb1f7207dd5ef44a9cdd 795 Gene3D G3DSA:3.30.56.10 141 184 1.1E-8 T 28-03-2018 AM393_RS26505 20df5d680474fb1f7207dd5ef44a9cdd 795 SMART SM00874 403 471 1.5E-31 T 28-03-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 AM393_RS26505 20df5d680474fb1f7207dd5ef44a9cdd 795 Gene3D G3DSA:3.50.40.10 195 395 8.0E-75 T 28-03-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 AM393_RS26505 20df5d680474fb1f7207dd5ef44a9cdd 795 Pfam PF01588 Putative tRNA binding domain 45 145 4.0E-28 T 28-03-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 AM393_RS26505 20df5d680474fb1f7207dd5ef44a9cdd 795 Gene3D G3DSA:3.30.930.10 490 690 4.5E-37 T 28-03-2018 AM393_RS02050 cd47392db1ecf4d8652053124a1ea677 315 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS02050 cd47392db1ecf4d8652053124a1ea677 315 SUPERFAMILY SSF54631 266 308 1.97E-7 T 28-03-2018 AM393_RS02050 cd47392db1ecf4d8652053124a1ea677 315 Gene3D G3DSA:3.10.580.10 238 308 7.6E-7 T 28-03-2018 AM393_RS02050 cd47392db1ecf4d8652053124a1ea677 315 Pfam PF00005 ABC transporter 18 162 1.2E-31 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS02050 cd47392db1ecf4d8652053124a1ea677 315 Pfam PF00571 CBS domain 266 306 5.2E-5 T 28-03-2018 IPR000644 CBS domain AM393_RS02050 cd47392db1ecf4d8652053124a1ea677 315 Gene3D G3DSA:3.40.50.300 1 237 3.4E-73 T 28-03-2018 AM393_RS02050 cd47392db1ecf4d8652053124a1ea677 315 SUPERFAMILY SSF52540 1 239 1.21E-74 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS02050 cd47392db1ecf4d8652053124a1ea677 315 SMART SM00382 26 212 2.1E-15 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS05065 9ae095119f7df3badf75f7a6a796419c 472 Gene3D G3DSA:3.30.420.40 246 471 2.8E-39 T 28-03-2018 AM393_RS05065 9ae095119f7df3badf75f7a6a796419c 472 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 351 371 - T 28-03-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AM393_RS05065 9ae095119f7df3badf75f7a6a796419c 472 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 259 438 2.5E-22 T 28-03-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 AM393_RS05065 9ae095119f7df3badf75f7a6a796419c 472 Gene3D G3DSA:3.30.420.40 1 245 8.8E-59 T 28-03-2018 AM393_RS05065 9ae095119f7df3badf75f7a6a796419c 472 TIGRFAM TIGR02628 fuculo_kin_coli: L-fuculokinase 5 463 2.5E-225 T 28-03-2018 IPR013450 L-fuculokinase GO:0005975|GO:0008737 KEGG: 00051+2.7.1.51 AM393_RS05065 9ae095119f7df3badf75f7a6a796419c 472 SUPERFAMILY SSF53067 5 252 1.92E-59 T 28-03-2018 AM393_RS05065 9ae095119f7df3badf75f7a6a796419c 472 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 134 146 - T 28-03-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AM393_RS05065 9ae095119f7df3badf75f7a6a796419c 472 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 5 249 6.0E-79 T 28-03-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 AM393_RS05065 9ae095119f7df3badf75f7a6a796419c 472 SUPERFAMILY SSF53067 256 468 3.2E-42 T 28-03-2018 AM393_RS05065 9ae095119f7df3badf75f7a6a796419c 472 Hamap MF_00986 L-fuculokinase [fucK]. 3 464 62.45 T 28-03-2018 IPR013450 L-fuculokinase GO:0005975|GO:0008737 KEGG: 00051+2.7.1.51 AM393_RS05065 9ae095119f7df3badf75f7a6a796419c 472 PIRSF PIRSF000538 3 472 1.8E-79 T 28-03-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AM393_RS19035 ad03760415832eea21a91aa7541eb4f5 365 Gene3D G3DSA:1.10.287.130 35 187 8.4E-7 T 28-03-2018 AM393_RS19035 ad03760415832eea21a91aa7541eb4f5 365 SUPERFAMILY SSF47384 127 201 1.65E-11 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM393_RS19035 ad03760415832eea21a91aa7541eb4f5 365 Pfam PF00512 His Kinase A (phospho-acceptor) domain 145 201 6.0E-9 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM393_RS19035 ad03760415832eea21a91aa7541eb4f5 365 SMART SM00387 250 358 3.5E-21 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS19035 ad03760415832eea21a91aa7541eb4f5 365 SUPERFAMILY SSF55874 215 355 3.01E-26 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS19035 ad03760415832eea21a91aa7541eb4f5 365 Gene3D G3DSA:3.30.565.10 188 356 2.7E-27 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS19035 ad03760415832eea21a91aa7541eb4f5 365 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 253 355 2.9E-12 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS19035 ad03760415832eea21a91aa7541eb4f5 365 SMART SM00388 143 203 1.4E-9 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM393_RS19035 ad03760415832eea21a91aa7541eb4f5 365 PRINTS PR00344 Bacterial sensor protein C-terminal signature 286 300 6.0E-7 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM393_RS19035 ad03760415832eea21a91aa7541eb4f5 365 PRINTS PR00344 Bacterial sensor protein C-terminal signature 342 355 6.0E-7 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM393_RS19035 ad03760415832eea21a91aa7541eb4f5 365 PRINTS PR00344 Bacterial sensor protein C-terminal signature 317 335 6.0E-7 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM393_RS19035 ad03760415832eea21a91aa7541eb4f5 365 SMART SM00304 90 142 0.0044 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM393_RS10615 fdb76285bef4d6ef8823eadb9c63ef6b 233 SUPERFAMILY SSF46785 11 81 1.99E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS10615 fdb76285bef4d6ef8823eadb9c63ef6b 233 SUPERFAMILY SSF48008 107 225 9.94E-19 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AM393_RS10615 fdb76285bef4d6ef8823eadb9c63ef6b 233 Gene3D G3DSA:1.20.120.530 100 230 4.6E-21 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AM393_RS10615 fdb76285bef4d6ef8823eadb9c63ef6b 233 Pfam PF00392 Bacterial regulatory proteins, gntR family 18 77 1.2E-18 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM393_RS10615 fdb76285bef4d6ef8823eadb9c63ef6b 233 Gene3D G3DSA:1.10.10.10 1 79 7.2E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS10615 fdb76285bef4d6ef8823eadb9c63ef6b 233 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 37 51 7.3E-10 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM393_RS10615 fdb76285bef4d6ef8823eadb9c63ef6b 233 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 51 67 7.3E-10 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM393_RS10615 fdb76285bef4d6ef8823eadb9c63ef6b 233 Pfam PF07729 FCD domain 108 226 1.4E-20 T 28-03-2018 IPR011711 GntR, C-terminal AM393_RS10615 fdb76285bef4d6ef8823eadb9c63ef6b 233 SMART SM00345 18 77 4.1E-19 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM393_RS10615 fdb76285bef4d6ef8823eadb9c63ef6b 233 SMART SM00895 106 227 2.8E-17 T 28-03-2018 IPR011711 GntR, C-terminal AM393_RS03900 36e22c6138f5c18aaeb11040e1054aa9 857 SUPERFAMILY SSF81923 4 156 4.58E-42 T 28-03-2018 IPR004176 Clp, N-terminal GO:0019538 AM393_RS03900 36e22c6138f5c18aaeb11040e1054aa9 857 Gene3D G3DSA:1.10.8.60 766 856 1.0E-23 T 28-03-2018 AM393_RS03900 36e22c6138f5c18aaeb11040e1054aa9 857 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 203 337 1.5E-13 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AM393_RS03900 36e22c6138f5c18aaeb11040e1054aa9 857 SUPERFAMILY SSF52540 159 545 1.76E-99 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS03900 36e22c6138f5c18aaeb11040e1054aa9 857 Pfam PF07724 AAA domain (Cdc48 subfamily) 596 760 3.4E-55 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AM393_RS03900 36e22c6138f5c18aaeb11040e1054aa9 857 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 294 306 - T 28-03-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 AM393_RS03900 36e22c6138f5c18aaeb11040e1054aa9 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 646 664 4.3E-42 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 AM393_RS03900 36e22c6138f5c18aaeb11040e1054aa9 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 708 722 4.3E-42 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 AM393_RS03900 36e22c6138f5c18aaeb11040e1054aa9 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 675 693 4.3E-42 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 AM393_RS03900 36e22c6138f5c18aaeb11040e1054aa9 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 601 619 4.3E-42 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 AM393_RS03900 36e22c6138f5c18aaeb11040e1054aa9 857 SMART SM00382 597 748 5.9E-10 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS03900 36e22c6138f5c18aaeb11040e1054aa9 857 SMART SM00382 198 343 3.9E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS03900 36e22c6138f5c18aaeb11040e1054aa9 857 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 766 845 2.0E-28 T 28-03-2018 IPR019489 Clp ATPase, C-terminal AM393_RS03900 36e22c6138f5c18aaeb11040e1054aa9 857 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 854 0.0 T 28-03-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0016485 AM393_RS03900 36e22c6138f5c18aaeb11040e1054aa9 857 Gene3D G3DSA:3.40.50.300 552 765 2.0E-54 T 28-03-2018 AM393_RS03900 36e22c6138f5c18aaeb11040e1054aa9 857 Gene3D G3DSA:1.10.1780.10 1 151 5.0E-32 T 28-03-2018 IPR004176 Clp, N-terminal GO:0019538 AM393_RS03900 36e22c6138f5c18aaeb11040e1054aa9 857 Gene3D G3DSA:1.10.8.60 343 547 2.6E-45 T 28-03-2018 AM393_RS03900 36e22c6138f5c18aaeb11040e1054aa9 857 SUPERFAMILY SSF52540 546 853 1.92E-86 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS03900 36e22c6138f5c18aaeb11040e1054aa9 857 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 631 649 - T 28-03-2018 IPR028299 ClpA/B, conserved site 2 AM393_RS03900 36e22c6138f5c18aaeb11040e1054aa9 857 SMART SM01086 766 855 5.1E-37 T 28-03-2018 IPR019489 Clp ATPase, C-terminal AM393_RS03900 36e22c6138f5c18aaeb11040e1054aa9 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 94 145 9.9E-11 T 28-03-2018 IPR004176 Clp, N-terminal GO:0019538 AM393_RS03900 36e22c6138f5c18aaeb11040e1054aa9 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 68 7.1E-14 T 28-03-2018 IPR004176 Clp, N-terminal GO:0019538 AM393_RS03900 36e22c6138f5c18aaeb11040e1054aa9 857 Gene3D G3DSA:3.40.50.300 157 342 2.8E-25 T 28-03-2018 AM393_RS16005 26ae285e84864611951f018745dfc657 462 Gene3D G3DSA:1.10.220.70 55 139 2.4E-38 T 28-03-2018 AM393_RS16005 26ae285e84864611951f018745dfc657 462 PIRSF PIRSF018788 1 456 8.5E-234 T 28-03-2018 IPR010628 Ethanolamine ammonia lyase large subunit GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 AM393_RS16005 26ae285e84864611951f018745dfc657 462 Pfam PF06751 Ethanolamine ammonia lyase large subunit (EutB) 11 443 1.2E-221 T 28-03-2018 IPR010628 Ethanolamine ammonia lyase large subunit GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 AM393_RS16005 26ae285e84864611951f018745dfc657 462 Gene3D G3DSA:3.20.20.70 142 448 2.6E-161 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM393_RS16005 26ae285e84864611951f018745dfc657 462 Gene3D G3DSA:2.30.170.30 1 52 1.2E-24 T 28-03-2018 AM393_RS24080 b76bffbc5caee9c0e5a78d1053415a2f 149 Pfam PF01476 LysM domain 99 147 2.4E-12 T 28-03-2018 IPR018392 LysM domain AM393_RS24080 b76bffbc5caee9c0e5a78d1053415a2f 149 Pfam PF04972 BON domain 24 90 2.7E-10 T 28-03-2018 IPR007055 BON domain AM393_RS24080 b76bffbc5caee9c0e5a78d1053415a2f 149 Gene3D G3DSA:3.10.350.10 92 149 1.4E-16 T 28-03-2018 AM393_RS24080 b76bffbc5caee9c0e5a78d1053415a2f 149 SMART SM00257 98 147 3.0E-12 T 28-03-2018 IPR018392 LysM domain AM393_RS24080 b76bffbc5caee9c0e5a78d1053415a2f 149 SUPERFAMILY SSF54106 97 147 2.75E-8 T 28-03-2018 IPR018392 LysM domain AM393_RS04595 5c515ee9f7c2e5d5fa2fbecd80ba7b33 90 TIGRFAM TIGR00074 hypC_hupF: hydrogenase assembly chaperone HypC/HupF 1 84 1.8E-31 T 28-03-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC AM393_RS04595 5c515ee9f7c2e5d5fa2fbecd80ba7b33 90 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 62 74 1.6E-22 T 28-03-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC AM393_RS04595 5c515ee9f7c2e5d5fa2fbecd80ba7b33 90 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 2 9 1.6E-22 T 28-03-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC AM393_RS04595 5c515ee9f7c2e5d5fa2fbecd80ba7b33 90 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 17 33 1.6E-22 T 28-03-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC AM393_RS04595 5c515ee9f7c2e5d5fa2fbecd80ba7b33 90 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 44 60 1.6E-22 T 28-03-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC AM393_RS04595 5c515ee9f7c2e5d5fa2fbecd80ba7b33 90 SUPERFAMILY SSF159127 1 86 7.19E-28 T 28-03-2018 AM393_RS04595 5c515ee9f7c2e5d5fa2fbecd80ba7b33 90 ProSitePatterns PS01097 Hydrogenases expression/synthesis hupF/hypC family signature. 1 9 - T 28-03-2018 IPR019812 Hydrogenase assembly chaperone, conserved site AM393_RS04595 5c515ee9f7c2e5d5fa2fbecd80ba7b33 90 Pfam PF01455 HupF/HypC family 1 71 1.6E-25 T 28-03-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC AM393_RS22940 b866edc59ba37e38187e666d8b58ab1a 316 Gene3D G3DSA:3.30.1660.10 249 316 2.4E-21 T 28-03-2018 IPR025543 Dodecin-like AM393_RS22940 b866edc59ba37e38187e666d8b58ab1a 316 SUPERFAMILY SSF159871 3 94 1.03E-23 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 AM393_RS22940 b866edc59ba37e38187e666d8b58ab1a 316 Pfam PF07338 Protein of unknown function (DUF1471) 34 90 1.7E-19 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 AM393_RS22940 b866edc59ba37e38187e666d8b58ab1a 316 Pfam PF07338 Protein of unknown function (DUF1471) 261 316 5.2E-19 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 AM393_RS22940 b866edc59ba37e38187e666d8b58ab1a 316 Pfam PF07338 Protein of unknown function (DUF1471) 119 174 1.1E-16 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 AM393_RS22940 b866edc59ba37e38187e666d8b58ab1a 316 PIRSF PIRSF014774 1 316 6.9E-181 T 28-03-2018 IPR025539 YdgH protein AM393_RS22940 b866edc59ba37e38187e666d8b58ab1a 316 SUPERFAMILY SSF159871 241 316 1.44E-17 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 AM393_RS22940 b866edc59ba37e38187e666d8b58ab1a 316 Gene3D G3DSA:3.30.1660.10 108 174 1.9E-16 T 28-03-2018 IPR025543 Dodecin-like AM393_RS22940 b866edc59ba37e38187e666d8b58ab1a 316 Gene3D G3DSA:3.30.1660.10 22 90 2.2E-21 T 28-03-2018 IPR025543 Dodecin-like AM393_RS22940 b866edc59ba37e38187e666d8b58ab1a 316 SUPERFAMILY SSF159871 108 177 1.7E-16 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 AM393_RS15175 a43b7f9e74bb83ddf1c6497db3e0d5dc 171 TIGRFAM TIGR01708 typeII_sec_gspH: type II secretion system protein H 3 150 2.5E-20 T 28-03-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 AM393_RS15175 a43b7f9e74bb83ddf1c6497db3e0d5dc 171 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 4 24 - T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site AM393_RS15175 a43b7f9e74bb83ddf1c6497db3e0d5dc 171 Gene3D G3DSA:3.55.40.10 35 167 6.0E-21 T 28-03-2018 AM393_RS15175 a43b7f9e74bb83ddf1c6497db3e0d5dc 171 SUPERFAMILY SSF54523 6 140 4.63E-11 T 28-03-2018 AM393_RS15175 a43b7f9e74bb83ddf1c6497db3e0d5dc 171 PRINTS PR00885 Bacterial general secretion pathway protein H signature 131 146 2.1E-20 T 28-03-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 AM393_RS15175 a43b7f9e74bb83ddf1c6497db3e0d5dc 171 PRINTS PR00885 Bacterial general secretion pathway protein H signature 1 15 2.1E-20 T 28-03-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 AM393_RS15175 a43b7f9e74bb83ddf1c6497db3e0d5dc 171 PRINTS PR00885 Bacterial general secretion pathway protein H signature 16 30 2.1E-20 T 28-03-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 AM393_RS15175 a43b7f9e74bb83ddf1c6497db3e0d5dc 171 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 26 3.1E-6 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site AM393_RS15175 a43b7f9e74bb83ddf1c6497db3e0d5dc 171 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 3 26 1.9E-7 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site AM393_RS27845 7c31f1be3c495011d422da29b2ec7d09 516 Gene3D G3DSA:1.20.120.230 109 286 3.3E-7 T 28-03-2018 AM393_RS27845 7c31f1be3c495011d422da29b2ec7d09 516 SUPERFAMILY SSF55785 11 105 5.41E-25 T 28-03-2018 IPR000014 PAS domain AM393_RS27845 7c31f1be3c495011d422da29b2ec7d09 516 SMART SM00283 251 512 1.6E-95 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AM393_RS27845 7c31f1be3c495011d422da29b2ec7d09 516 Gene3D G3DSA:3.40.50.10600 1 108 3.8E-29 T 28-03-2018 AM393_RS27845 7c31f1be3c495011d422da29b2ec7d09 516 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 316 477 6.4E-44 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AM393_RS27845 7c31f1be3c495011d422da29b2ec7d09 516 SMART SM00304 184 236 1.7E-4 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM393_RS27845 7c31f1be3c495011d422da29b2ec7d09 516 Pfam PF08447 PAS fold 22 105 3.1E-16 T 28-03-2018 IPR013655 PAS fold-3 GO:0005515 AM393_RS27845 7c31f1be3c495011d422da29b2ec7d09 516 Gene3D G3DSA:1.10.287.950 287 515 5.2E-48 T 28-03-2018 AM393_RS27845 7c31f1be3c495011d422da29b2ec7d09 516 SUPERFAMILY SSF58104 206 512 1.57E-74 T 28-03-2018 AM393_RS27845 7c31f1be3c495011d422da29b2ec7d09 516 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 11 100 1.5E-12 T 28-03-2018 IPR000014 PAS domain AM393_RS18705 d0f0aeb8933aa9cb91f4ae0dcaed1f49 379 PIRSF PIRSF000267 2 378 5.6E-133 T 28-03-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 AM393_RS18705 d0f0aeb8933aa9cb91f4ae0dcaed1f49 379 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 1 379 2.5E-200 T 28-03-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 AM393_RS18705 d0f0aeb8933aa9cb91f4ae0dcaed1f49 379 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 7 362 4.3E-111 T 28-03-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 AM393_RS11690 d18b7883241b81c7a7774478b4b9211d 142 SUPERFAMILY SSF54747 3 73 7.72E-30 T 28-03-2018 IPR020784 Ribosomal protein L11, N-terminal AM393_RS11690 d18b7883241b81c7a7774478b4b9211d 142 Gene3D G3DSA:3.30.1550.10 3 72 2.9E-34 T 28-03-2018 IPR020784 Ribosomal protein L11, N-terminal AM393_RS11690 d18b7883241b81c7a7774478b4b9211d 142 SMART SM00649 9 141 1.1E-83 T 28-03-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 AM393_RS11690 d18b7883241b81c7a7774478b4b9211d 142 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 30.571 T 28-03-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 AM393_RS11690 d18b7883241b81c7a7774478b4b9211d 142 SUPERFAMILY SSF46906 68 141 1.09E-25 T 28-03-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 AM393_RS11690 d18b7883241b81c7a7774478b4b9211d 142 Gene3D G3DSA:1.10.10.250 73 141 6.7E-24 T 28-03-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 AM393_RS11690 d18b7883241b81c7a7774478b4b9211d 142 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 74 2.0E-16 T 28-03-2018 AM393_RS11690 d18b7883241b81c7a7774478b4b9211d 142 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 1.2E-29 T 28-03-2018 IPR020784 Ribosomal protein L11, N-terminal AM393_RS11690 d18b7883241b81c7a7774478b4b9211d 142 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 142 3.0E-65 T 28-03-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS11690 d18b7883241b81c7a7774478b4b9211d 142 ProSitePatterns PS00359 Ribosomal protein L11 signature. 127 142 - T 28-03-2018 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM393_RS11690 d18b7883241b81c7a7774478b4b9211d 142 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 4.5E-24 T 28-03-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 AM393_RS15515 be0d723a4fd33787634dae4e53f7d45c 267 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 29 46 - T 28-03-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 AM393_RS15515 be0d723a4fd33787634dae4e53f7d45c 267 PRINTS PR00069 Aldo-keto reductase signature 81 99 9.8E-46 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM393_RS15515 be0d723a4fd33787634dae4e53f7d45c 267 PRINTS PR00069 Aldo-keto reductase signature 149 178 9.8E-46 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM393_RS15515 be0d723a4fd33787634dae4e53f7d45c 267 PRINTS PR00069 Aldo-keto reductase signature 186 210 9.8E-46 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM393_RS15515 be0d723a4fd33787634dae4e53f7d45c 267 PRINTS PR00069 Aldo-keto reductase signature 114 131 9.8E-46 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM393_RS15515 be0d723a4fd33787634dae4e53f7d45c 267 PRINTS PR00069 Aldo-keto reductase signature 25 49 9.8E-46 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM393_RS15515 be0d723a4fd33787634dae4e53f7d45c 267 SUPERFAMILY SSF51430 2 257 5.11E-85 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM393_RS15515 be0d723a4fd33787634dae4e53f7d45c 267 PIRSF PIRSF000097 1 265 4.0E-68 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM393_RS15515 be0d723a4fd33787634dae4e53f7d45c 267 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 114 131 - T 28-03-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 AM393_RS15515 be0d723a4fd33787634dae4e53f7d45c 267 Gene3D G3DSA:3.20.20.100 1 263 3.8E-87 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM393_RS15515 be0d723a4fd33787634dae4e53f7d45c 267 Pfam PF00248 Aldo/keto reductase family 8 250 7.0E-52 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM393_RS05825 f91ff1d1f840e60c3b8df126050f71c1 237 Gene3D G3DSA:2.70.70.10 97 236 2.3E-36 T 28-03-2018 AM393_RS05825 f91ff1d1f840e60c3b8df126050f71c1 237 SMART SM00257 29 73 3.2E-16 T 28-03-2018 IPR018392 LysM domain AM393_RS05825 f91ff1d1f840e60c3b8df126050f71c1 237 Pfam PF01476 LysM domain 30 72 9.3E-16 T 28-03-2018 IPR018392 LysM domain AM393_RS05825 f91ff1d1f840e60c3b8df126050f71c1 237 Gene3D G3DSA:3.10.350.10 22 89 1.3E-18 T 28-03-2018 AM393_RS05825 f91ff1d1f840e60c3b8df126050f71c1 237 Pfam PF01551 Peptidase family M23 131 224 2.3E-30 T 28-03-2018 IPR016047 Peptidase M23 AM393_RS05825 f91ff1d1f840e60c3b8df126050f71c1 237 SUPERFAMILY SSF51261 30 228 3.98E-47 T 28-03-2018 IPR011055 Duplicated hybrid motif AM393_RS06080 184371beb35c4821aa6cbb852e60dd67 308 SUPERFAMILY SSF54593 1 276 1.81E-32 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM393_RS06080 184371beb35c4821aa6cbb852e60dd67 308 Gene3D G3DSA:3.10.180.10 205 302 0.001 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM393_RS06080 184371beb35c4821aa6cbb852e60dd67 308 Gene3D G3DSA:3.10.180.10 2 204 9.4E-26 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM393_RS06080 184371beb35c4821aa6cbb852e60dd67 308 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 149 262 5.4E-13 T 28-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AM393_RS01970 8380bd94f60b7dde1a6eee1449d7b2a7 266 SUPERFAMILY SSF53613 5 265 4.05E-79 T 28-03-2018 IPR029056 Ribokinase-like AM393_RS01970 8380bd94f60b7dde1a6eee1449d7b2a7 266 Gene3D G3DSA:3.40.1190.20 1 266 1.4E-62 T 28-03-2018 IPR029056 Ribokinase-like AM393_RS01970 8380bd94f60b7dde1a6eee1449d7b2a7 266 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 6 262 1.6E-105 T 28-03-2018 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AM393_RS01970 8380bd94f60b7dde1a6eee1449d7b2a7 266 Pfam PF08543 Phosphomethylpyrimidine kinase 13 260 2.6E-93 T 28-03-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 AM393_RS10365 6bebc680eea50852a6fb0c2cf805ee54 467 SUPERFAMILY SSF48295 363 466 3.66E-38 T 28-03-2018 IPR010921 Trp repressor/replication initiator GO:0043565 AM393_RS10365 6bebc680eea50852a6fb0c2cf805ee54 467 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 6 465 5.9E-187 T 28-03-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 AM393_RS10365 6bebc680eea50852a6fb0c2cf805ee54 467 Pfam PF00308 Bacterial dnaA protein 133 349 6.8E-99 T 28-03-2018 IPR013317 Chromosomal replication initiator protein DnaA AM393_RS10365 6bebc680eea50852a6fb0c2cf805ee54 467 Gene3D G3DSA:1.10.8.60 298 369 7.0E-28 T 28-03-2018 AM393_RS10365 6bebc680eea50852a6fb0c2cf805ee54 467 ProSitePatterns PS01008 DnaA protein signature. 425 444 - T 28-03-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 AM393_RS10365 6bebc680eea50852a6fb0c2cf805ee54 467 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 3 466 34.412 T 28-03-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 AM393_RS10365 6bebc680eea50852a6fb0c2cf805ee54 467 SMART SM00760 375 444 6.1E-45 T 28-03-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 AM393_RS10365 6bebc680eea50852a6fb0c2cf805ee54 467 Pfam PF11638 DnaA N-terminal domain 4 64 2.7E-20 T 28-03-2018 IPR024633 DnaA N-terminal domain AM393_RS10365 6bebc680eea50852a6fb0c2cf805ee54 467 SUPERFAMILY SSF52540 133 343 2.18E-44 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS10365 6bebc680eea50852a6fb0c2cf805ee54 467 Gene3D G3DSA:1.10.1750.10 370 466 1.5E-36 T 28-03-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 AM393_RS10365 6bebc680eea50852a6fb0c2cf805ee54 467 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 425 444 1.7E-54 T 28-03-2018 IPR020591 Chromosomal replication control, initiator DnaA-like AM393_RS10365 6bebc680eea50852a6fb0c2cf805ee54 467 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 197 211 1.7E-54 T 28-03-2018 IPR020591 Chromosomal replication control, initiator DnaA-like AM393_RS10365 6bebc680eea50852a6fb0c2cf805ee54 467 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 263 290 1.7E-54 T 28-03-2018 IPR020591 Chromosomal replication control, initiator DnaA-like AM393_RS10365 6bebc680eea50852a6fb0c2cf805ee54 467 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 229 243 1.7E-54 T 28-03-2018 IPR020591 Chromosomal replication control, initiator DnaA-like AM393_RS10365 6bebc680eea50852a6fb0c2cf805ee54 467 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 165 185 1.7E-54 T 28-03-2018 IPR020591 Chromosomal replication control, initiator DnaA-like AM393_RS10365 6bebc680eea50852a6fb0c2cf805ee54 467 Gene3D G3DSA:3.40.50.300 129 296 2.4E-21 T 28-03-2018 AM393_RS10365 6bebc680eea50852a6fb0c2cf805ee54 467 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 376 444 1.0E-32 T 28-03-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 AM393_RS10365 6bebc680eea50852a6fb0c2cf805ee54 467 SMART SM00382 164 366 3.4E-7 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS03860 6274f4821a756fb2088819e9996d7058 883 SUPERFAMILY SSF51735 2 136 2.07E-31 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS03860 6274f4821a756fb2088819e9996d7058 883 Gene3D G3DSA:3.40.50.261 285 452 3.0E-33 T 28-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AM393_RS03860 6274f4821a756fb2088819e9996d7058 883 Pfam PF13549 ATP-grasp domain 472 692 2.0E-75 T 28-03-2018 AM393_RS03860 6274f4821a756fb2088819e9996d7058 883 Gene3D G3DSA:3.40.630.30 717 882 2.1E-23 T 28-03-2018 AM393_RS03860 6274f4821a756fb2088819e9996d7058 883 Gene3D G3DSA:3.30.470.20 562 697 7.1E-26 T 28-03-2018 AM393_RS03860 6274f4821a756fb2088819e9996d7058 883 SUPERFAMILY SSF52210 125 286 3.66E-35 T 28-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AM393_RS03860 6274f4821a756fb2088819e9996d7058 883 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 147 280 1.0E-45 T 28-03-2018 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain AM393_RS03860 6274f4821a756fb2088819e9996d7058 883 Gene3D G3DSA:3.30.1490.20 500 561 1.2E-26 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AM393_RS03860 6274f4821a756fb2088819e9996d7058 883 SUPERFAMILY SSF56059 481 685 2.16E-28 T 28-03-2018 AM393_RS03860 6274f4821a756fb2088819e9996d7058 883 SMART SM00881 9 104 2.6E-24 T 28-03-2018 IPR003781 CoA-binding GO:0048037 AM393_RS03860 6274f4821a756fb2088819e9996d7058 883 Gene3D G3DSA:3.40.50.720 9 126 1.1E-28 T 28-03-2018 AM393_RS03860 6274f4821a756fb2088819e9996d7058 883 Pfam PF13302 Acetyltransferase (GNAT) domain 725 864 6.2E-8 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AM393_RS03860 6274f4821a756fb2088819e9996d7058 883 SUPERFAMILY SSF52210 287 447 5.89E-35 T 28-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AM393_RS03860 6274f4821a756fb2088819e9996d7058 883 Gene3D G3DSA:3.40.50.261 127 284 1.0E-38 T 28-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AM393_RS03860 6274f4821a756fb2088819e9996d7058 883 Pfam PF13380 CoA binding domain 13 129 1.5E-20 T 28-03-2018 IPR003781 CoA-binding GO:0048037 AM393_RS03860 6274f4821a756fb2088819e9996d7058 883 SUPERFAMILY SSF55729 615 866 2.27E-23 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM393_RS00750 06f40850f55678aff2fda5e420a7e0d1 577 Pfam PF00750 tRNA synthetases class I (R) 96 446 2.0E-172 T 28-03-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 AM393_RS00750 06f40850f55678aff2fda5e420a7e0d1 577 Gene3D G3DSA:1.10.730.10 441 577 1.3E-42 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM393_RS00750 06f40850f55678aff2fda5e420a7e0d1 577 SMART SM00836 460 577 3.7E-35 T 28-03-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 AM393_RS00750 06f40850f55678aff2fda5e420a7e0d1 577 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 7 87 3.9E-22 T 28-03-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 AM393_RS00750 06f40850f55678aff2fda5e420a7e0d1 577 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 122 133 - T 28-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM393_RS00750 06f40850f55678aff2fda5e420a7e0d1 577 Gene3D G3DSA:3.30.1360.70 1 106 6.3E-30 T 28-03-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 AM393_RS00750 06f40850f55678aff2fda5e420a7e0d1 577 Pfam PF05746 DALR anticodon binding domain 460 577 1.8E-33 T 28-03-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 AM393_RS00750 06f40850f55678aff2fda5e420a7e0d1 577 SUPERFAMILY SSF47323 454 577 2.03E-34 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM393_RS00750 06f40850f55678aff2fda5e420a7e0d1 577 Gene3D G3DSA:3.40.50.620 107 440 4.3E-60 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM393_RS00750 06f40850f55678aff2fda5e420a7e0d1 577 SUPERFAMILY SSF52374 109 454 8.09E-98 T 28-03-2018 AM393_RS00750 06f40850f55678aff2fda5e420a7e0d1 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 153 166 1.5E-25 T 28-03-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AM393_RS00750 06f40850f55678aff2fda5e420a7e0d1 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 129 145 1.5E-25 T 28-03-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AM393_RS00750 06f40850f55678aff2fda5e420a7e0d1 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 114 129 1.5E-25 T 28-03-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AM393_RS00750 06f40850f55678aff2fda5e420a7e0d1 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 303 324 1.5E-25 T 28-03-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AM393_RS00750 06f40850f55678aff2fda5e420a7e0d1 577 SUPERFAMILY SSF55190 2 101 6.54E-24 T 28-03-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 AM393_RS00750 06f40850f55678aff2fda5e420a7e0d1 577 Hamap MF_00123 Arginine--tRNA ligase [argS]. 5 577 29.218 T 28-03-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AM393_RS00750 06f40850f55678aff2fda5e420a7e0d1 577 SMART SM01016 5 87 4.2E-29 T 28-03-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 AM393_RS00750 06f40850f55678aff2fda5e420a7e0d1 577 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 3 577 6.5E-214 T 28-03-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AM393_RS21845 15989135b70a80788f24870cbfff8ed9 324 Gene3D G3DSA:1.10.8.60 180 239 6.2E-18 T 28-03-2018 AM393_RS21845 15989135b70a80788f24870cbfff8ed9 324 TIGRFAM TIGR02974 phageshock_pspF: psp operon transcriptional activator 8 322 1.8E-157 T 28-03-2018 IPR014317 Transcription activator PspF AM393_RS21845 15989135b70a80788f24870cbfff8ed9 324 SUPERFAMILY SSF46689 222 324 2.42E-7 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS21845 15989135b70a80788f24870cbfff8ed9 324 Pfam PF02954 Bacterial regulatory protein, Fis family 285 321 9.0E-7 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM393_RS21845 15989135b70a80788f24870cbfff8ed9 324 Gene3D G3DSA:3.40.50.300 1 179 6.0E-28 T 28-03-2018 AM393_RS21845 15989135b70a80788f24870cbfff8ed9 324 SUPERFAMILY SSF52540 9 248 5.9E-65 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS21845 15989135b70a80788f24870cbfff8ed9 324 SMART SM00382 28 180 1.1E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS21845 15989135b70a80788f24870cbfff8ed9 324 Gene3D G3DSA:1.10.10.60 240 324 4.7E-9 T 28-03-2018 AM393_RS21845 15989135b70a80788f24870cbfff8ed9 324 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 94 109 - T 28-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AM393_RS21845 15989135b70a80788f24870cbfff8ed9 324 Pfam PF00158 Sigma-54 interaction domain 9 170 6.2E-62 T 28-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AM393_RS21845 15989135b70a80788f24870cbfff8ed9 324 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 288 305 8.2E-7 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM393_RS21845 15989135b70a80788f24870cbfff8ed9 324 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 305 324 8.2E-7 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM393_RS21845 15989135b70a80788f24870cbfff8ed9 324 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 222 231 - T 28-03-2018 IPR025944 Sigma-54 interaction domain, conserved site AM393_RS04670 435d20d1911b83be43f9c9aadd58bef2 273 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS04670 435d20d1911b83be43f9c9aadd58bef2 273 SUPERFAMILY SSF52540 8 234 1.28E-56 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS04670 435d20d1911b83be43f9c9aadd58bef2 273 SMART SM00382 33 249 1.7E-10 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS04670 435d20d1911b83be43f9c9aadd58bef2 273 Gene3D G3DSA:3.40.50.300 1 250 5.4E-57 T 28-03-2018 AM393_RS04670 435d20d1911b83be43f9c9aadd58bef2 273 Pfam PF00005 ABC transporter 24 171 5.3E-28 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS01635 9a1828cdeb484ff12cb7732d191315b2 296 Gene3D G3DSA:3.40.190.10 182 258 5.0E-9 T 28-03-2018 AM393_RS01635 9a1828cdeb484ff12cb7732d191315b2 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 1.9E-14 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS01635 9a1828cdeb484ff12cb7732d191315b2 296 Pfam PF03466 LysR substrate binding domain 89 268 1.7E-23 T 28-03-2018 IPR005119 LysR, substrate-binding AM393_RS01635 9a1828cdeb484ff12cb7732d191315b2 296 SUPERFAMILY SSF53850 89 284 9.05E-28 T 28-03-2018 AM393_RS01635 9a1828cdeb484ff12cb7732d191315b2 296 SUPERFAMILY SSF46785 5 88 2.56E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS01635 9a1828cdeb484ff12cb7732d191315b2 296 Gene3D G3DSA:3.40.190.10 90 181 3.6E-15 T 28-03-2018 AM393_RS01635 9a1828cdeb484ff12cb7732d191315b2 296 Gene3D G3DSA:1.10.10.10 4 84 5.5E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS02855 e00c7ae1ed20acdf8a410d45174b56b4 337 SUPERFAMILY SSF51735 5 157 4.24E-44 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS02855 e00c7ae1ed20acdf8a410d45174b56b4 337 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 141 317 1.9E-37 T 28-03-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AM393_RS02855 e00c7ae1ed20acdf8a410d45174b56b4 337 Gene3D G3DSA:3.30.360.10 144 314 1.4E-42 T 28-03-2018 AM393_RS02855 e00c7ae1ed20acdf8a410d45174b56b4 337 PIRSF PIRSF000148 4 337 2.7E-96 T 28-03-2018 AM393_RS02855 e00c7ae1ed20acdf8a410d45174b56b4 337 SMART SM00859 6 121 3.5E-32 T 28-03-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AM393_RS02855 e00c7ae1ed20acdf8a410d45174b56b4 337 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 6 115 1.4E-24 T 28-03-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AM393_RS02855 e00c7ae1ed20acdf8a410d45174b56b4 337 Gene3D G3DSA:3.40.50.720 1 143 7.6E-29 T 28-03-2018 AM393_RS02855 e00c7ae1ed20acdf8a410d45174b56b4 337 SUPERFAMILY SSF55347 131 319 1.84E-48 T 28-03-2018 AM393_RS25865 bb563f76a6cd484c8cb3cddab0e5b66f 259 Gene3D G3DSA:3.30.1330.80 117 223 3.6E-45 T 28-03-2018 AM393_RS25865 bb563f76a6cd484c8cb3cddab0e5b66f 259 SUPERFAMILY SSF117856 28 258 2.41E-87 T 28-03-2018 AM393_RS25865 bb563f76a6cd484c8cb3cddab0e5b66f 259 PIRSF PIRSF001332 10 259 8.4E-99 T 28-03-2018 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939 AM393_RS25865 bb563f76a6cd484c8cb3cddab0e5b66f 259 Pfam PF03306 Alpha-acetolactate decarboxylase 29 246 2.6E-85 T 28-03-2018 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939 AM393_RS25865 bb563f76a6cd484c8cb3cddab0e5b66f 259 TIGRFAM TIGR01252 acetolac_decarb: alpha-acetolactate decarboxylase 28 256 1.2E-88 T 28-03-2018 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939 AM393_RS25865 bb563f76a6cd484c8cb3cddab0e5b66f 259 Gene3D G3DSA:3.30.1330.80 26 116 6.7E-37 T 28-03-2018 AM393_RS13975 eec9155e3f69e0569c48385b7b35ed24 130 SUPERFAMILY SSF55298 17 125 7.7E-30 T 28-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AM393_RS13975 eec9155e3f69e0569c48385b7b35ed24 130 Gene3D G3DSA:3.30.1330.40 16 130 1.8E-29 T 28-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AM393_RS13975 eec9155e3f69e0569c48385b7b35ed24 130 Pfam PF01042 Endoribonuclease L-PSP 20 123 3.7E-23 T 28-03-2018 IPR006175 YjgF/YER057c/UK114 family AM393_RS08315 173fb2cdaacd3678a7968e3a88b6734e 100 Pfam PF00276 Ribosomal protein L23 9 95 5.9E-31 T 28-03-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 AM393_RS08315 173fb2cdaacd3678a7968e3a88b6734e 100 SUPERFAMILY SSF54189 6 97 2.84E-30 T 28-03-2018 IPR012678 Ribosomal protein L23/L15e core domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM393_RS08315 173fb2cdaacd3678a7968e3a88b6734e 100 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 8 98 22.535 T 28-03-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 AM393_RS08315 173fb2cdaacd3678a7968e3a88b6734e 100 ProSitePatterns PS00050 Ribosomal protein L23 signature. 81 96 - T 28-03-2018 IPR001014 Ribosomal protein L23/L25, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM393_RS08315 173fb2cdaacd3678a7968e3a88b6734e 100 Gene3D G3DSA:3.30.70.330 6 100 2.0E-30 T 28-03-2018 AM393_RS23905 2b31322b3ae3fd9ae5cdaa5fc3694eae 445 Pfam PF07690 Major Facilitator Superfamily 29 392 3.9E-38 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS23905 2b31322b3ae3fd9ae5cdaa5fc3694eae 445 Gene3D G3DSA:1.20.1250.20 239 432 2.5E-21 T 28-03-2018 AM393_RS23905 2b31322b3ae3fd9ae5cdaa5fc3694eae 445 Gene3D G3DSA:1.20.1250.20 13 222 3.4E-34 T 28-03-2018 AM393_RS23905 2b31322b3ae3fd9ae5cdaa5fc3694eae 445 SUPERFAMILY SSF103473 16 427 1.96E-78 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS03655 4be085c8657a2b2269b3400a339b7c63 425 Pfam PF00874 PRD domain 131 215 2.0E-4 T 28-03-2018 IPR011608 PRD domain GO:0006355 AM393_RS03655 4be085c8657a2b2269b3400a339b7c63 425 Pfam PF00874 PRD domain 241 328 2.6E-10 T 28-03-2018 IPR011608 PRD domain GO:0006355 AM393_RS03655 4be085c8657a2b2269b3400a339b7c63 425 SUPERFAMILY SSF63520 234 332 5.1E-14 T 28-03-2018 IPR011608 PRD domain GO:0006355 AM393_RS03655 4be085c8657a2b2269b3400a339b7c63 425 Gene3D G3DSA:1.10.1790.10 123 222 0.29 T 28-03-2018 IPR011608 PRD domain GO:0006355 AM393_RS03655 4be085c8657a2b2269b3400a339b7c63 425 Gene3D G3DSA:1.10.1790.10 232 333 2.1E-11 T 28-03-2018 IPR011608 PRD domain GO:0006355 AM393_RS21970 89da6f64ba37c41314b4986e6411edc8 253 SUPERFAMILY SSF51735 6 252 4.6E-67 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS21970 89da6f64ba37c41314b4986e6411edc8 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 7.5E-33 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS21970 89da6f64ba37c41314b4986e6411edc8 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 7.5E-33 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS21970 89da6f64ba37c41314b4986e6411edc8 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 7.5E-33 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS21970 89da6f64ba37c41314b4986e6411edc8 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 87 98 7.5E-33 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS21970 89da6f64ba37c41314b4986e6411edc8 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 7.5E-33 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS21970 89da6f64ba37c41314b4986e6411edc8 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 7.5E-33 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS21970 89da6f64ba37c41314b4986e6411edc8 253 Gene3D G3DSA:3.40.50.720 42 253 1.8E-49 T 28-03-2018 AM393_RS21970 89da6f64ba37c41314b4986e6411edc8 253 Gene3D G3DSA:3.40.50.720 1 41 3.1E-8 T 28-03-2018 AM393_RS21970 89da6f64ba37c41314b4986e6411edc8 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 251 2.3E-50 T 28-03-2018 AM393_RS21970 89da6f64ba37c41314b4986e6411edc8 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 5.7E-7 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS21970 89da6f64ba37c41314b4986e6411edc8 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 5.7E-7 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS21970 89da6f64ba37c41314b4986e6411edc8 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 87 98 5.7E-7 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS26490 91e4355d1d35a861fb683ee2ff0abf93 417 SUPERFAMILY SSF54373 271 360 1.96E-11 T 28-03-2018 AM393_RS26490 91e4355d1d35a861fb683ee2ff0abf93 417 Pfam PF01266 FAD dependent oxidoreductase 4 394 2.1E-58 T 28-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AM393_RS26490 91e4355d1d35a861fb683ee2ff0abf93 417 Gene3D G3DSA:3.50.50.60 1 413 1.4E-39 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS26490 91e4355d1d35a861fb683ee2ff0abf93 417 SUPERFAMILY SSF51905 3 56 2.59E-43 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS26490 91e4355d1d35a861fb683ee2ff0abf93 417 SUPERFAMILY SSF51905 112 269 2.59E-43 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS26490 91e4355d1d35a861fb683ee2ff0abf93 417 SUPERFAMILY SSF51905 360 415 2.59E-43 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS05695 cb391df5f52fe25033a65e19c12dc570 870 Pfam PF13953 PapC C-terminal domain 791 855 6.3E-24 T 28-03-2018 IPR025949 PapC-like, C-terminal domain AM393_RS05695 cb391df5f52fe25033a65e19c12dc570 870 Pfam PF00577 Outer membrane usher protein 200 782 4.4E-220 T 28-03-2018 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 AM393_RS05695 cb391df5f52fe25033a65e19c12dc570 870 SUPERFAMILY SSF141729 63 176 5.75E-37 T 28-03-2018 AM393_RS05695 cb391df5f52fe25033a65e19c12dc570 870 Pfam PF13954 PapC N-terminal domain 40 184 1.8E-50 T 28-03-2018 IPR025885 PapC, N-terminal domain GO:0005515 AM393_RS05695 cb391df5f52fe25033a65e19c12dc570 870 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 317 327 - T 28-03-2018 IPR018030 Fimbrial membrane usher, conserved site AM393_RS21430 09633148e466fdb86a69996d7653bb89 406 Gene3D G3DSA:3.40.640.10 175 289 1.5E-43 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM393_RS21430 09633148e466fdb86a69996d7653bb89 406 Gene3D G3DSA:3.90.1150.10 2 174 3.5E-49 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM393_RS21430 09633148e466fdb86a69996d7653bb89 406 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 220 257 - T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM393_RS21430 09633148e466fdb86a69996d7653bb89 406 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 13 397 1.1E-160 T 28-03-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 AM393_RS21430 09633148e466fdb86a69996d7653bb89 406 Gene3D G3DSA:3.90.1150.10 290 405 1.7E-18 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM393_RS21430 09633148e466fdb86a69996d7653bb89 406 TIGRFAM TIGR03246 arg_catab_astC: succinylornithine transaminase family 5 401 7.2E-222 T 28-03-2018 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria GO:0006520|GO:0008483|GO:0030170 AM393_RS21430 09633148e466fdb86a69996d7653bb89 406 Pfam PF00202 Aminotransferase class-III 22 396 2.1E-124 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM393_RS21430 09633148e466fdb86a69996d7653bb89 406 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 11 398 45.339 T 28-03-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 AM393_RS21430 09633148e466fdb86a69996d7653bb89 406 PIRSF PIRSF000521 26 158 3.8E-6 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM393_RS21430 09633148e466fdb86a69996d7653bb89 406 PIRSF PIRSF000521 159 400 5.5E-37 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM393_RS21430 09633148e466fdb86a69996d7653bb89 406 SUPERFAMILY SSF53383 11 397 1.21E-126 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM393_RS28405 46eb42cd0407a16514f5055e2621dd9a 143 Pfam PF00717 Peptidase S24-like 59 122 1.6E-12 T 28-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AM393_RS28405 46eb42cd0407a16514f5055e2621dd9a 143 SUPERFAMILY SSF51306 17 137 1.7E-31 T 28-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AM393_RS28405 46eb42cd0407a16514f5055e2621dd9a 143 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 54 64 2.3E-8 T 28-03-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 AM393_RS28405 46eb42cd0407a16514f5055e2621dd9a 143 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 93 105 2.3E-8 T 28-03-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 AM393_RS28405 46eb42cd0407a16514f5055e2621dd9a 143 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 65 76 2.3E-8 T 28-03-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 AM393_RS28405 46eb42cd0407a16514f5055e2621dd9a 143 Gene3D G3DSA:2.10.109.10 23 139 7.6E-25 T 28-03-2018 AM393_RS23195 2679debe059b5142212001f7efce79b9 495 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 446 464 2.1E-43 T 28-03-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 AM393_RS23195 2679debe059b5142212001f7efce79b9 495 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 264 283 2.1E-43 T 28-03-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 AM393_RS23195 2679debe059b5142212001f7efce79b9 495 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 331 350 2.1E-43 T 28-03-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 AM393_RS23195 2679debe059b5142212001f7efce79b9 495 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 244 263 2.1E-43 T 28-03-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 AM393_RS23195 2679debe059b5142212001f7efce79b9 495 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 401 422 2.1E-43 T 28-03-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 AM393_RS23195 2679debe059b5142212001f7efce79b9 495 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 291 307 2.1E-43 T 28-03-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 AM393_RS23195 2679debe059b5142212001f7efce79b9 495 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 148 168 2.1E-43 T 28-03-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 AM393_RS23195 2679debe059b5142212001f7efce79b9 495 Pfam PF02074 Carboxypeptidase Taq (M32) metallopeptidase 13 494 1.5E-99 T 28-03-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 AM393_RS23195 2679debe059b5142212001f7efce79b9 495 SUPERFAMILY SSF55486 4 495 7.08E-123 T 28-03-2018 AM393_RS23195 2679debe059b5142212001f7efce79b9 495 PIRSF PIRSF006615 2 495 1.6E-192 T 28-03-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 AM393_RS23195 2679debe059b5142212001f7efce79b9 495 Gene3D G3DSA:1.10.1370.10 45 494 5.3E-27 T 28-03-2018 AM393_RS10485 f872a8c1ad8a3ee32fcaa9d1f5565c73 609 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 609 41.281 T 28-03-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 AM393_RS10485 f872a8c1ad8a3ee32fcaa9d1f5565c73 609 SUPERFAMILY SSF56235 2 232 4.98E-75 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AM393_RS10485 f872a8c1ad8a3ee32fcaa9d1f5565c73 609 SUPERFAMILY SSF53697 245 609 1.34E-112 T 28-03-2018 AM393_RS10485 f872a8c1ad8a3ee32fcaa9d1f5565c73 609 Pfam PF13522 Glutamine amidotransferase domain 58 182 7.1E-21 T 28-03-2018 AM393_RS10485 f872a8c1ad8a3ee32fcaa9d1f5565c73 609 Pfam PF01380 SIS domain 462 591 8.1E-29 T 28-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AM393_RS10485 f872a8c1ad8a3ee32fcaa9d1f5565c73 609 Pfam PF01380 SIS domain 289 418 3.3E-33 T 28-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AM393_RS10485 f872a8c1ad8a3ee32fcaa9d1f5565c73 609 Gene3D G3DSA:3.40.50.10490 240 457 1.5E-60 T 28-03-2018 AM393_RS10485 f872a8c1ad8a3ee32fcaa9d1f5565c73 609 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 609 5.0E-267 T 28-03-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 AM393_RS10485 f872a8c1ad8a3ee32fcaa9d1f5565c73 609 Gene3D G3DSA:3.40.50.10490 458 607 5.6E-53 T 28-03-2018 AM393_RS10485 f872a8c1ad8a3ee32fcaa9d1f5565c73 609 Gene3D G3DSA:3.60.20.10 2 239 4.8E-69 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AM393_RS18965 12f6c01f8b5fa2966f339de7c03b36a6 508 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 139 155 - T 28-03-2018 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 AM393_RS18965 12f6c01f8b5fa2966f339de7c03b36a6 508 Gene3D G3DSA:1.20.200.10 200 506 8.2E-117 T 28-03-2018 AM393_RS18965 12f6c01f8b5fa2966f339de7c03b36a6 508 Pfam PF00221 Aromatic amino acid lyase 11 472 3.1E-183 T 28-03-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 AM393_RS18965 12f6c01f8b5fa2966f339de7c03b36a6 508 SUPERFAMILY SSF48557 5 504 5.73E-188 T 28-03-2018 IPR008948 L-Aspartase-like GO:0003824 AM393_RS18965 12f6c01f8b5fa2966f339de7c03b36a6 508 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 6 504 2.7E-215 T 28-03-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AM393_RS18965 12f6c01f8b5fa2966f339de7c03b36a6 508 Hamap MF_00229 Histidine ammonia-lyase [hutH]. 3 505 44.426 T 28-03-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AM393_RS18965 12f6c01f8b5fa2966f339de7c03b36a6 508 Gene3D G3DSA:1.10.275.10 2 198 6.8E-71 T 28-03-2018 IPR024083 Fumarase/histidase, N-terminal AM393_RS26745 45802a7e0b2965737dbf626482186ec4 216 Gene3D G3DSA:3.40.50.2300 6 138 4.1E-38 T 28-03-2018 AM393_RS26745 45802a7e0b2965737dbf626482186ec4 216 ProSitePatterns PS00622 LuxR-type HTH domain signature. 170 197 - T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS26745 45802a7e0b2965737dbf626482186ec4 216 Gene3D G3DSA:1.10.10.10 139 215 6.6E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS26745 45802a7e0b2965737dbf626482186ec4 216 Pfam PF00072 Response regulator receiver domain 9 120 1.2E-30 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM393_RS26745 45802a7e0b2965737dbf626482186ec4 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 156 170 1.1E-13 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS26745 45802a7e0b2965737dbf626482186ec4 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 186 198 1.1E-13 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS26745 45802a7e0b2965737dbf626482186ec4 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 170 186 1.1E-13 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS26745 45802a7e0b2965737dbf626482186ec4 216 SMART SM00448 7 120 2.5E-36 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM393_RS26745 45802a7e0b2965737dbf626482186ec4 216 SUPERFAMILY SSF52172 7 135 7.4E-36 T 28-03-2018 IPR011006 CheY-like superfamily AM393_RS26745 45802a7e0b2965737dbf626482186ec4 216 SMART SM00421 153 210 1.2E-25 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS26745 45802a7e0b2965737dbf626482186ec4 216 Pfam PF00196 Bacterial regulatory proteins, luxR family 155 209 8.2E-23 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS26745 45802a7e0b2965737dbf626482186ec4 216 SUPERFAMILY SSF46894 146 213 1.33E-20 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM393_RS11590 d85bb3209b5d7f0ee7f1c5435cc957d2 204 ProSitePatterns PS00910 Uncharacterized protein family UPF0029 signature. 80 109 - T 28-03-2018 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site AM393_RS11590 d85bb3209b5d7f0ee7f1c5435cc957d2 204 Pfam PF01205 Uncharacterized protein family UPF0029 18 125 1.4E-26 T 28-03-2018 IPR001498 Impact, N-terminal AM393_RS11590 d85bb3209b5d7f0ee7f1c5435cc957d2 204 SUPERFAMILY SSF54211 3 131 2.5E-41 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM393_RS11590 d85bb3209b5d7f0ee7f1c5435cc957d2 204 SUPERFAMILY SSF54980 136 203 4.6E-17 T 28-03-2018 IPR035647 EF-G domain III/V-like AM393_RS11590 d85bb3209b5d7f0ee7f1c5435cc957d2 204 Pfam PF09186 Domain of unknown function (DUF1949) 141 195 2.0E-17 T 28-03-2018 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal AM393_RS11590 d85bb3209b5d7f0ee7f1c5435cc957d2 204 Gene3D G3DSA:3.30.230.30 7 134 2.5E-37 T 28-03-2018 IPR001498 Impact, N-terminal AM393_RS11590 d85bb3209b5d7f0ee7f1c5435cc957d2 204 TIGRFAM TIGR00257 IMPACT_YIGZ: uncharacterized protein, YigZ family 1 203 1.1E-80 T 28-03-2018 IPR015796 Impact family, bacterial/archaeal AM393_RS11590 d85bb3209b5d7f0ee7f1c5435cc957d2 204 Gene3D G3DSA:3.30.70.240 136 199 3.4E-20 T 28-03-2018 AM393_RS02065 1eabe2ad4a321704ab7e4c265a5334ab 765 SMART SM01217 685 754 6.1E-32 T 28-03-2018 IPR026891 Fibronectin type III-like domain AM393_RS02065 1eabe2ad4a321704ab7e4c265a5334ab 765 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 273 290 - T 28-03-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 AM393_RS02065 1eabe2ad4a321704ab7e4c265a5334ab 765 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 395 648 6.6E-62 T 28-03-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 AM393_RS02065 1eabe2ad4a321704ab7e4c265a5334ab 765 Gene3D G3DSA:3.20.20.300 32 375 1.4E-101 T 28-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AM393_RS02065 1eabe2ad4a321704ab7e4c265a5334ab 765 SUPERFAMILY SSF52279 395 464 1.14E-58 T 28-03-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 AM393_RS02065 1eabe2ad4a321704ab7e4c265a5334ab 765 SUPERFAMILY SSF52279 495 651 1.14E-58 T 28-03-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 AM393_RS02065 1eabe2ad4a321704ab7e4c265a5334ab 765 Gene3D G3DSA:3.40.50.1700 380 648 1.1E-85 T 28-03-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 AM393_RS02065 1eabe2ad4a321704ab7e4c265a5334ab 765 SUPERFAMILY SSF51445 33 394 3.58E-97 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily AM393_RS02065 1eabe2ad4a321704ab7e4c265a5334ab 765 PRINTS PR00133 Glycosyl hydrolase family 3 signature 120 139 1.3E-21 T 28-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AM393_RS02065 1eabe2ad4a321704ab7e4c265a5334ab 765 PRINTS PR00133 Glycosyl hydrolase family 3 signature 273 291 1.3E-21 T 28-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AM393_RS02065 1eabe2ad4a321704ab7e4c265a5334ab 765 PRINTS PR00133 Glycosyl hydrolase family 3 signature 166 182 1.3E-21 T 28-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AM393_RS02065 1eabe2ad4a321704ab7e4c265a5334ab 765 PRINTS PR00133 Glycosyl hydrolase family 3 signature 203 219 1.3E-21 T 28-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AM393_RS02065 1eabe2ad4a321704ab7e4c265a5334ab 765 PRINTS PR00133 Glycosyl hydrolase family 3 signature 101 117 1.3E-21 T 28-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AM393_RS02065 1eabe2ad4a321704ab7e4c265a5334ab 765 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 46 352 1.5E-98 T 28-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AM393_RS02065 1eabe2ad4a321704ab7e4c265a5334ab 765 Pfam PF14310 Fibronectin type III-like domain 686 753 7.1E-23 T 28-03-2018 IPR026891 Fibronectin type III-like domain AM393_RS02065 1eabe2ad4a321704ab7e4c265a5334ab 765 Gene3D G3DSA:2.60.40.10 649 764 1.9E-35 T 28-03-2018 IPR013783 Immunoglobulin-like fold AM393_RS03125 4fa7e8caa81cc83f6adad99da67a0679 85 Gene3D G3DSA:3.30.1340.10 1 85 3.7E-32 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like AM393_RS03125 4fa7e8caa81cc83f6adad99da67a0679 85 SUPERFAMILY SSF55594 1 82 2.36E-27 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like AM393_RS03125 4fa7e8caa81cc83f6adad99da67a0679 85 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 28-03-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site AM393_RS03125 4fa7e8caa81cc83f6adad99da67a0679 85 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 82 4.4E-31 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like AM393_RS03125 4fa7e8caa81cc83f6adad99da67a0679 85 PRINTS PR00107 Phosphocarrier protein signature 53 70 4.5E-20 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like AM393_RS03125 4fa7e8caa81cc83f6adad99da67a0679 85 PRINTS PR00107 Phosphocarrier protein signature 38 53 4.5E-20 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like AM393_RS03125 4fa7e8caa81cc83f6adad99da67a0679 85 PRINTS PR00107 Phosphocarrier protein signature 13 29 4.5E-20 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like AM393_RS03125 4fa7e8caa81cc83f6adad99da67a0679 85 Pfam PF00381 PTS HPr component phosphorylation site 3 82 2.2E-28 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like AM393_RS03125 4fa7e8caa81cc83f6adad99da67a0679 85 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 28-03-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site AM393_RS21400 a6356714d3079d332e628263f800146f 511 Gene3D G3DSA:1.10.3720.10 283 511 5.8E-12 T 28-03-2018 AM393_RS21400 a6356714d3079d332e628263f800146f 511 Gene3D G3DSA:1.10.3720.10 5 271 2.5E-22 T 28-03-2018 AM393_RS21400 a6356714d3079d332e628263f800146f 511 SUPERFAMILY SSF161098 7 255 1.57E-20 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS21400 a6356714d3079d332e628263f800146f 511 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 348 484 2.9E-8 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS21400 a6356714d3079d332e628263f800146f 511 SUPERFAMILY SSF161098 307 496 4.32E-18 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS01390 71692c23489325143e9229414aa7458e 619 Gene3D G3DSA:3.40.50.300 90 554 7.7E-20 T 28-03-2018 AM393_RS01390 71692c23489325143e9229414aa7458e 619 Pfam PF12696 TraM recognition site of TraD and TraG 418 515 2.1E-5 T 28-03-2018 IPR032689 TraD/TraG, TraM recognition site AM393_RS01390 71692c23489325143e9229414aa7458e 619 PIRSF PIRSF003273 1 605 7.7E-287 T 28-03-2018 IPR016387 Mobilization, MobA AM393_RS01390 71692c23489325143e9229414aa7458e 619 SUPERFAMILY SSF52540 149 535 1.33E-35 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS26150 9a07bf08db77aa9424e568685fb2176d 364 Gene3D G3DSA:2.40.110.10 102 194 7.1E-20 T 28-03-2018 AM393_RS26150 9a07bf08db77aa9424e568685fb2176d 364 Gene3D G3DSA:1.20.140.10 195 364 8.8E-21 T 28-03-2018 AM393_RS26150 9a07bf08db77aa9424e568685fb2176d 364 SUPERFAMILY SSF56645 2 203 5.89E-38 T 28-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AM393_RS26150 9a07bf08db77aa9424e568685fb2176d 364 Gene3D G3DSA:1.10.540.10 1 83 6.7E-9 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AM393_RS26150 9a07bf08db77aa9424e568685fb2176d 364 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 237 345 2.4E-11 T 28-03-2018 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain AM393_RS26150 9a07bf08db77aa9424e568685fb2176d 364 PIRSF PIRSF016578 1 363 1.6E-23 T 28-03-2018 AM393_RS26150 9a07bf08db77aa9424e568685fb2176d 364 SUPERFAMILY SSF47203 228 359 3.38E-21 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AM393_RS26150 9a07bf08db77aa9424e568685fb2176d 364 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 105 195 1.2E-9 T 28-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AM393_RS26150 9a07bf08db77aa9424e568685fb2176d 364 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 2 64 1.9E-4 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AM393_RS19850 e874032aad41cb58254e862a09982083 73 PRINTS PR00050 Cold shock protein signature 4 19 8.2E-16 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM393_RS19850 e874032aad41cb58254e862a09982083 73 PRINTS PR00050 Cold shock protein signature 25 34 8.2E-16 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM393_RS19850 e874032aad41cb58254e862a09982083 73 PRINTS PR00050 Cold shock protein signature 40 58 8.2E-16 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM393_RS19850 e874032aad41cb58254e862a09982083 73 SMART SM00357 3 67 4.1E-28 T 28-03-2018 IPR011129 Cold shock domain GO:0003676 AM393_RS19850 e874032aad41cb58254e862a09982083 73 PIRSF PIRSF002599 1 73 1.0E-22 T 28-03-2018 IPR012156 Cold shock, CspA GO:0003676 AM393_RS19850 e874032aad41cb58254e862a09982083 73 Gene3D G3DSA:2.40.50.140 1 73 1.7E-26 T 28-03-2018 AM393_RS19850 e874032aad41cb58254e862a09982083 73 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 28-03-2018 IPR019844 Cold-shock conserved site AM393_RS19850 e874032aad41cb58254e862a09982083 73 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 2.7E-28 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM393_RS19850 e874032aad41cb58254e862a09982083 73 SUPERFAMILY SSF50249 1 66 4.65E-23 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM393_RS19850 e874032aad41cb58254e862a09982083 73 TIGRFAM TIGR02381 cspD: cold shock domain protein CspD 1 68 1.1E-42 T 28-03-2018 IPR012751 CspD, cold shock GO:0003676|GO:0005737|GO:0006355|GO:0006950 AM393_RS06215 4657cd2b686a54494a6b381c21359336 378 Pfam PF06969 HemN C-terminal domain 304 364 1.3E-9 T 28-03-2018 IPR010723 HemN, C-terminal AM393_RS06215 4657cd2b686a54494a6b381c21359336 378 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 7 368 2.4E-139 T 28-03-2018 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related GO:0004109|GO:0005737|GO:0006779|GO:0055114 AM393_RS06215 4657cd2b686a54494a6b381c21359336 378 SUPERFAMILY SSF102114 5 376 2.49E-109 T 28-03-2018 AM393_RS06215 4657cd2b686a54494a6b381c21359336 378 Gene3D G3DSA:3.20.20.70 5 317 1.3E-47 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM393_RS06215 4657cd2b686a54494a6b381c21359336 378 SMART SM00729 6 223 1.9E-54 T 28-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AM393_RS06215 4657cd2b686a54494a6b381c21359336 378 Pfam PF04055 Radical SAM superfamily 11 179 1.3E-19 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AM393_RS24125 996189fecc359a4a5121bfdcab46e550 359 SUPERFAMILY SSF51556 18 58 4.99E-89 T 28-03-2018 IPR032466 Metal-dependent hydrolase AM393_RS24125 996189fecc359a4a5121bfdcab46e550 359 SUPERFAMILY SSF51556 85 358 4.99E-89 T 28-03-2018 IPR032466 Metal-dependent hydrolase AM393_RS24125 996189fecc359a4a5121bfdcab46e550 359 PIRSF PIRSF016839 72 359 2.1E-53 T 28-03-2018 AM393_RS24125 996189fecc359a4a5121bfdcab46e550 359 PIRSF PIRSF016839 18 74 0.6 T 28-03-2018 AM393_RS24125 996189fecc359a4a5121bfdcab46e550 359 ProSitePatterns PS01322 Phosphotriesterase family signature 1. 34 42 - T 28-03-2018 IPR017947 Aryldialkylphosphatase, zinc-binding site GO:0008270|GO:0009056|GO:0016788 AM393_RS24125 996189fecc359a4a5121bfdcab46e550 359 Gene3D G3DSA:3.20.20.140 17 359 1.1E-66 T 28-03-2018 AM393_RS24125 996189fecc359a4a5121bfdcab46e550 359 Pfam PF02126 Phosphotriesterase family 31 357 4.0E-69 T 28-03-2018 IPR001559 Phosphotriesterase GO:0008270|GO:0009056 AM393_RS20775 2a047937ead513f2c207229b00f3d1e4 337 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 4 334 6.4E-142 T 28-03-2018 IPR003770 Endolytic murein transglycosylase AM393_RS20775 2a047937ead513f2c207229b00f3d1e4 337 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 4 329 32.514 T 28-03-2018 IPR003770 Endolytic murein transglycosylase AM393_RS20775 2a047937ead513f2c207229b00f3d1e4 337 Gene3D G3DSA:3.30.160.60 71 105 2.2E-18 T 28-03-2018 AM393_RS20775 2a047937ead513f2c207229b00f3d1e4 337 Gene3D G3DSA:3.30.160.60 300 334 1.7E-14 T 28-03-2018 AM393_RS20775 2a047937ead513f2c207229b00f3d1e4 337 Pfam PF02618 YceG-like family 40 325 1.2E-79 T 28-03-2018 IPR003770 Endolytic murein transglycosylase AM393_RS05375 a81ee069549425abca427e53880bdd76 961 Pfam PF00675 Insulinase (Peptidase family M16) 54 191 4.2E-38 T 28-03-2018 IPR011765 Peptidase M16, N-terminal AM393_RS05375 a81ee069549425abca427e53880bdd76 961 SUPERFAMILY SSF63411 33 262 2.65E-50 T 28-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AM393_RS05375 a81ee069549425abca427e53880bdd76 961 Gene3D G3DSA:3.30.830.10 22 268 3.4E-68 T 28-03-2018 AM393_RS05375 a81ee069549425abca427e53880bdd76 961 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 75 98 - T 28-03-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 AM393_RS05375 a81ee069549425abca427e53880bdd76 961 Pfam PF16187 Middle or third domain of peptidase_M16 400 673 9.5E-52 T 28-03-2018 IPR032632 Peptidase M16, middle/third domain AM393_RS05375 a81ee069549425abca427e53880bdd76 961 SUPERFAMILY SSF63411 737 957 1.41E-43 T 28-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AM393_RS05375 a81ee069549425abca427e53880bdd76 961 Gene3D G3DSA:3.30.830.10 748 948 1.9E-25 T 28-03-2018 AM393_RS05375 a81ee069549425abca427e53880bdd76 961 SUPERFAMILY SSF63411 265 502 3.85E-66 T 28-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AM393_RS05375 a81ee069549425abca427e53880bdd76 961 Gene3D G3DSA:3.30.830.10 503 747 8.3E-27 T 28-03-2018 AM393_RS05375 a81ee069549425abca427e53880bdd76 961 Gene3D G3DSA:3.30.830.10 272 502 4.0E-58 T 28-03-2018 AM393_RS05375 a81ee069549425abca427e53880bdd76 961 Pfam PF05193 Peptidase M16 inactive domain 215 392 7.1E-17 T 28-03-2018 IPR007863 Peptidase M16, C-terminal AM393_RS05375 a81ee069549425abca427e53880bdd76 961 Pfam PF05193 Peptidase M16 inactive domain 681 856 1.3E-11 T 28-03-2018 IPR007863 Peptidase M16, C-terminal AM393_RS05375 a81ee069549425abca427e53880bdd76 961 SUPERFAMILY SSF63411 504 729 3.32E-44 T 28-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AM393_RS14385 f980ae9fec05463aa03e5d7eaaa56349 434 Gene3D G3DSA:1.20.1250.20 235 427 3.6E-16 T 28-03-2018 AM393_RS14385 f980ae9fec05463aa03e5d7eaaa56349 434 SUPERFAMILY SSF103473 11 420 1.44E-58 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS14385 f980ae9fec05463aa03e5d7eaaa56349 434 Pfam PF07690 Major Facilitator Superfamily 59 381 1.5E-26 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS14385 f980ae9fec05463aa03e5d7eaaa56349 434 Gene3D G3DSA:1.20.1250.20 14 228 1.5E-25 T 28-03-2018 AM393_RS12135 03221dc3d6f539ceb70a6752e0cfbb2c 941 Gene3D G3DSA:3.40.50.300 412 614 1.8E-20 T 28-03-2018 AM393_RS12135 03221dc3d6f539ceb70a6752e0cfbb2c 941 Gene3D G3DSA:3.40.50.300 35 132 1.6E-4 T 28-03-2018 AM393_RS12135 03221dc3d6f539ceb70a6752e0cfbb2c 941 Pfam PF00005 ABC transporter 806 860 1.1E-5 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS12135 03221dc3d6f539ceb70a6752e0cfbb2c 941 Hamap MF_00205 UvrABC system protein A [uvrA]. 1 940 23.121 T 28-03-2018 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 AM393_RS12135 03221dc3d6f539ceb70a6752e0cfbb2c 941 Gene3D G3DSA:3.30.190.20 133 248 2.8E-42 T 28-03-2018 AM393_RS12135 03221dc3d6f539ceb70a6752e0cfbb2c 941 Gene3D G3DSA:3.40.50.300 3 34 0.0015 T 28-03-2018 AM393_RS12135 03221dc3d6f539ceb70a6752e0cfbb2c 941 ProSitePatterns PS00211 ABC transporters family signature. 830 844 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS12135 03221dc3d6f539ceb70a6752e0cfbb2c 941 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 3 925 0.0 T 28-03-2018 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 AM393_RS12135 03221dc3d6f539ceb70a6752e0cfbb2c 941 SUPERFAMILY SSF52540 4 204 1.17E-43 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS12135 03221dc3d6f539ceb70a6752e0cfbb2c 941 SUPERFAMILY SSF52540 430 569 1.17E-43 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS12135 03221dc3d6f539ceb70a6752e0cfbb2c 941 SUPERFAMILY SSF52540 613 911 5.8E-54 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS12135 03221dc3d6f539ceb70a6752e0cfbb2c 941 ProSitePatterns PS00211 ABC transporters family signature. 487 501 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS12135 03221dc3d6f539ceb70a6752e0cfbb2c 941 Gene3D G3DSA:3.40.50.300 615 939 6.4E-55 T 28-03-2018 AM393_RS12135 03221dc3d6f539ceb70a6752e0cfbb2c 941 Gene3D G3DSA:1.10.8.280 285 405 2.4E-38 T 28-03-2018 AM393_RS09485 8376c496a2540023118f040766cc44a2 161 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 89 100 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM393_RS09485 8376c496a2540023118f040766cc44a2 161 Gene3D G3DSA:3.30.70.20 64 95 2.2E-11 T 28-03-2018 AM393_RS09485 8376c496a2540023118f040766cc44a2 161 Pfam PF13247 4Fe-4S dicluster domain 56 141 8.5E-13 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM393_RS09485 8376c496a2540023118f040766cc44a2 161 Gene3D G3DSA:3.30.70.20 2 21 0.023 T 28-03-2018 AM393_RS09485 8376c496a2540023118f040766cc44a2 161 Gene3D G3DSA:3.30.70.20 96 124 7.0E-12 T 28-03-2018 AM393_RS09485 8376c496a2540023118f040766cc44a2 161 Gene3D G3DSA:3.30.70.20 22 63 1.3E-7 T 28-03-2018 AM393_RS09485 8376c496a2540023118f040766cc44a2 161 Pfam PF12800 4Fe-4S binding domain 10 22 0.021 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM393_RS09485 8376c496a2540023118f040766cc44a2 161 Gene3D G3DSA:3.30.70.20 125 159 1.6E-5 T 28-03-2018 AM393_RS09485 8376c496a2540023118f040766cc44a2 161 SUPERFAMILY SSF54862 2 157 1.57E-41 T 28-03-2018 AM393_RS29015 a297bf89f6d2eec029ae0c1d77112e66 91 TIGRFAM TIGR02052 MerP: mercuric transport protein periplasmic component 1 90 1.9E-44 T 28-03-2018 IPR011795 Mercuric transport protein periplasmic component GO:0015097|GO:0015694|GO:0042597|GO:0045340|GO:0046689 AM393_RS29015 a297bf89f6d2eec029ae0c1d77112e66 91 Pfam PF00403 Heavy-metal-associated domain 25 85 1.8E-17 T 28-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AM393_RS29015 a297bf89f6d2eec029ae0c1d77112e66 91 Gene3D G3DSA:3.30.70.100 20 91 7.8E-24 T 28-03-2018 AM393_RS29015 a297bf89f6d2eec029ae0c1d77112e66 91 ProSitePatterns PS01047 Heavy-metal-associated domain. 28 57 - T 28-03-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 AM393_RS29015 a297bf89f6d2eec029ae0c1d77112e66 91 PRINTS PR00946 Mercury scavenger protein signature 31 47 5.8E-57 T 28-03-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 AM393_RS29015 a297bf89f6d2eec029ae0c1d77112e66 91 PRINTS PR00946 Mercury scavenger protein signature 20 31 5.8E-57 T 28-03-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 AM393_RS29015 a297bf89f6d2eec029ae0c1d77112e66 91 PRINTS PR00946 Mercury scavenger protein signature 47 62 5.8E-57 T 28-03-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 AM393_RS29015 a297bf89f6d2eec029ae0c1d77112e66 91 PRINTS PR00946 Mercury scavenger protein signature 76 90 5.8E-57 T 28-03-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 AM393_RS29015 a297bf89f6d2eec029ae0c1d77112e66 91 PRINTS PR00946 Mercury scavenger protein signature 2 20 5.8E-57 T 28-03-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 AM393_RS29015 a297bf89f6d2eec029ae0c1d77112e66 91 PRINTS PR00946 Mercury scavenger protein signature 62 76 5.8E-57 T 28-03-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 AM393_RS29015 a297bf89f6d2eec029ae0c1d77112e66 91 SUPERFAMILY SSF55008 17 88 6.15E-22 T 28-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AM393_RS18480 1cfd85e312cc3206848f047d053926fd 382 PIRSF PIRSF038994 1 382 3.0E-115 T 28-03-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 AM393_RS18480 1cfd85e312cc3206848f047d053926fd 382 SUPERFAMILY SSF51338 1 53 4.32E-17 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM393_RS18480 1cfd85e312cc3206848f047d053926fd 382 SUPERFAMILY SSF51556 54 350 8.9E-103 T 28-03-2018 IPR032466 Metal-dependent hydrolase AM393_RS18480 1cfd85e312cc3206848f047d053926fd 382 Gene3D G3DSA:3.20.20.140 68 350 1.4E-92 T 28-03-2018 AM393_RS18480 1cfd85e312cc3206848f047d053926fd 382 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 1 377 2.4E-173 T 28-03-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 AM393_RS18480 1cfd85e312cc3206848f047d053926fd 382 Pfam PF01979 Amidohydrolase family 50 379 3.4E-47 T 28-03-2018 IPR006680 Amidohydrolase-related GO:0016787 AM393_RS18480 1cfd85e312cc3206848f047d053926fd 382 Gene3D G3DSA:2.30.40.10 2 67 8.4E-9 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM393_RS08605 41587604526001af2dfa070397a82e97 133 Pfam PF01479 S4 domain 9 52 7.0E-13 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AM393_RS08605 41587604526001af2dfa070397a82e97 133 SUPERFAMILY SSF55174 8 103 3.01E-29 T 28-03-2018 AM393_RS08605 41587604526001af2dfa070397a82e97 133 SMART SM00363 9 70 6.6E-8 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AM393_RS08605 41587604526001af2dfa070397a82e97 133 Gene3D G3DSA:3.10.290.10 2 105 4.0E-26 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AM393_RS08605 41587604526001af2dfa070397a82e97 133 PIRSF PIRSF016821 6 133 1.0E-40 T 28-03-2018 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 AM393_RS10095 c47e9dc1067e734f5045f11a0929c685 313 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 2.9E-5 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM393_RS10095 c47e9dc1067e734f5045f11a0929c685 313 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 2.9E-5 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM393_RS10095 c47e9dc1067e734f5045f11a0929c685 313 Pfam PF13377 Periplasmic binding protein-like domain 161 299 1.6E-8 T 28-03-2018 AM393_RS10095 c47e9dc1067e734f5045f11a0929c685 313 Gene3D G3DSA:1.10.260.40 2 53 3.0E-22 T 28-03-2018 AM393_RS10095 c47e9dc1067e734f5045f11a0929c685 313 SUPERFAMILY SSF47413 2 59 3.6E-17 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM393_RS10095 c47e9dc1067e734f5045f11a0929c685 313 Gene3D G3DSA:3.40.50.2300 54 164 1.4E-9 T 28-03-2018 AM393_RS10095 c47e9dc1067e734f5045f11a0929c685 313 SUPERFAMILY SSF53822 59 300 2.36E-18 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AM393_RS10095 c47e9dc1067e734f5045f11a0929c685 313 Gene3D G3DSA:3.40.50.2300 165 298 1.0E-14 T 28-03-2018 AM393_RS10095 c47e9dc1067e734f5045f11a0929c685 313 SMART SM00354 1 71 1.4E-25 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM393_RS10095 c47e9dc1067e734f5045f11a0929c685 313 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 6.1E-18 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM393_RS04895 76d868ea7b71fcc7828410584218867c 432 SUPERFAMILY SSF51604 143 427 1.7E-128 T 28-03-2018 IPR029065 Enolase C-terminal domain-like AM393_RS04895 76d868ea7b71fcc7828410584218867c 432 Pfam PF03952 Enolase, N-terminal domain 4 134 1.4E-57 T 28-03-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM393_RS04895 76d868ea7b71fcc7828410584218867c 432 Gene3D G3DSA:3.30.390.10 3 127 1.1E-50 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM393_RS04895 76d868ea7b71fcc7828410584218867c 432 Gene3D G3DSA:3.20.20.120 128 431 8.4E-105 T 28-03-2018 IPR029065 Enolase C-terminal domain-like AM393_RS04895 76d868ea7b71fcc7828410584218867c 432 Pfam PF00113 Enolase, C-terminal TIM barrel domain 144 429 2.0E-142 T 28-03-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM393_RS04895 76d868ea7b71fcc7828410584218867c 432 PRINTS PR00148 Enolase signature 339 353 4.7E-44 T 28-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM393_RS04895 76d868ea7b71fcc7828410584218867c 432 PRINTS PR00148 Enolase signature 368 385 4.7E-44 T 28-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM393_RS04895 76d868ea7b71fcc7828410584218867c 432 PRINTS PR00148 Enolase signature 37 51 4.7E-44 T 28-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM393_RS04895 76d868ea7b71fcc7828410584218867c 432 PRINTS PR00148 Enolase signature 316 327 4.7E-44 T 28-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM393_RS04895 76d868ea7b71fcc7828410584218867c 432 PRINTS PR00148 Enolase signature 107 123 4.7E-44 T 28-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM393_RS04895 76d868ea7b71fcc7828410584218867c 432 PRINTS PR00148 Enolase signature 165 178 4.7E-44 T 28-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM393_RS04895 76d868ea7b71fcc7828410584218867c 432 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 428 3.2E-206 T 28-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM393_RS04895 76d868ea7b71fcc7828410584218867c 432 Hamap MF_00318 Enolase [eno]. 2 416 44.272 T 28-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM393_RS04895 76d868ea7b71fcc7828410584218867c 432 SUPERFAMILY SSF54826 3 138 1.59E-55 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM393_RS04895 76d868ea7b71fcc7828410584218867c 432 SMART SM01192 143 430 1.3E-215 T 28-03-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM393_RS04895 76d868ea7b71fcc7828410584218867c 432 SMART SM01193 4 134 7.6E-93 T 28-03-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM393_RS04895 76d868ea7b71fcc7828410584218867c 432 ProSitePatterns PS00164 Enolase signature. 339 352 - T 28-03-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM393_RS04895 76d868ea7b71fcc7828410584218867c 432 PIRSF PIRSF001400 1 430 1.3E-192 T 28-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM393_RS24135 c76d529ab22007a5153a2f9303c05996 380 Pfam PF01546 Peptidase family M20/M25/M40 67 366 6.2E-31 T 28-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 AM393_RS24135 c76d529ab22007a5153a2f9303c05996 380 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 66 75 - T 28-03-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 AM393_RS24135 c76d529ab22007a5153a2f9303c05996 380 Pfam PF07687 Peptidase dimerisation domain 170 271 1.6E-22 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain AM393_RS24135 c76d529ab22007a5153a2f9303c05996 380 SUPERFAMILY SSF55031 174 270 1.5E-21 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain AM393_RS24135 c76d529ab22007a5153a2f9303c05996 380 TIGRFAM TIGR01910 DapE-ArgE: peptidase, ArgE/DapE family 6 356 5.0E-66 T 28-03-2018 IPR010182 N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine deformylase/Succinyl-diaminopimelate desuccinylase AM393_RS24135 c76d529ab22007a5153a2f9303c05996 380 Gene3D G3DSA:3.40.630.10 2 274 2.9E-60 T 28-03-2018 AM393_RS24135 c76d529ab22007a5153a2f9303c05996 380 SUPERFAMILY SSF53187 3 173 3.14E-54 T 28-03-2018 AM393_RS24135 c76d529ab22007a5153a2f9303c05996 380 SUPERFAMILY SSF53187 284 368 3.14E-54 T 28-03-2018 AM393_RS17650 56e3e6d5db5fde668d9484e07c3f339b 205 SUPERFAMILY SSF46894 143 200 9.52E-7 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM393_RS17650 56e3e6d5db5fde668d9484e07c3f339b 205 SMART SM00421 148 205 0.006 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS17650 56e3e6d5db5fde668d9484e07c3f339b 205 Gene3D G3DSA:1.10.1270.10 98 202 3.9E-6 T 28-03-2018 AM393_RS17650 56e3e6d5db5fde668d9484e07c3f339b 205 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 200 9.2E-7 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS17650 56e3e6d5db5fde668d9484e07c3f339b 205 ProDom PD116027 TRANSCRIPTION DNA-BINDING REGULATION RMBA YQEH ORF3-QACEDELTA1 FUSION CYTOPLASMIC ECS3703 TRANSMEMBRANE 1 194 4.0E-29 T 28-03-2018 AM393_RS16905 3edf8acf459a0cd8d4c5bedf7de080af 461 Gene3D G3DSA:1.20.120.640 306 392 6.5E-23 T 28-03-2018 AM393_RS16905 3edf8acf459a0cd8d4c5bedf7de080af 461 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 222 243 3.6E-30 T 28-03-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 AM393_RS16905 3edf8acf459a0cd8d4c5bedf7de080af 461 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 25 36 3.6E-30 T 28-03-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 AM393_RS16905 3edf8acf459a0cd8d4c5bedf7de080af 461 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 61 70 3.6E-30 T 28-03-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 AM393_RS16905 3edf8acf459a0cd8d4c5bedf7de080af 461 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 191 209 3.6E-30 T 28-03-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 AM393_RS16905 3edf8acf459a0cd8d4c5bedf7de080af 461 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 15 313 5.2E-145 T 28-03-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 AM393_RS16905 3edf8acf459a0cd8d4c5bedf7de080af 461 SMART SM00840 341 402 1.4E-29 T 28-03-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 AM393_RS16905 3edf8acf459a0cd8d4c5bedf7de080af 461 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 2 460 5.3E-200 T 28-03-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 AM393_RS16905 3edf8acf459a0cd8d4c5bedf7de080af 461 SUPERFAMILY SSF52374 1 313 8.45E-105 T 28-03-2018 AM393_RS16905 3edf8acf459a0cd8d4c5bedf7de080af 461 Pfam PF09190 DALR domain 341 402 3.5E-26 T 28-03-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 AM393_RS16905 3edf8acf459a0cd8d4c5bedf7de080af 461 Gene3D G3DSA:3.40.50.620 1 305 5.1E-93 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM393_RS16905 3edf8acf459a0cd8d4c5bedf7de080af 461 SUPERFAMILY SSF47323 316 460 1.57E-44 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM393_RS16905 3edf8acf459a0cd8d4c5bedf7de080af 461 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 2 461 39.766 T 28-03-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 AM393_RS07715 1adc366a35f31bb64db473698d682ba7 779 SUPERFAMILY SSF55785 142 267 1.34E-19 T 28-03-2018 IPR000014 PAS domain AM393_RS07715 1adc366a35f31bb64db473698d682ba7 779 SMART SM00388 282 347 4.8E-19 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM393_RS07715 1adc366a35f31bb64db473698d682ba7 779 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 152 276 2.2E-15 T 28-03-2018 IPR000014 PAS domain AM393_RS07715 1adc366a35f31bb64db473698d682ba7 779 Pfam PF00512 His Kinase A (phospho-acceptor) domain 283 346 1.8E-15 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM393_RS07715 1adc366a35f31bb64db473698d682ba7 779 SUPERFAMILY SSF47226 664 774 1.2E-27 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AM393_RS07715 1adc366a35f31bb64db473698d682ba7 779 SMART SM00448 527 640 2.2E-25 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM393_RS07715 1adc366a35f31bb64db473698d682ba7 779 SMART SM00387 394 508 8.5E-36 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS07715 1adc366a35f31bb64db473698d682ba7 779 SUPERFAMILY SSF47384 269 347 3.92E-17 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM393_RS07715 1adc366a35f31bb64db473698d682ba7 779 SMART SM00073 676 773 1.4E-17 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AM393_RS07715 1adc366a35f31bb64db473698d682ba7 779 SMART SM00091 155 221 3.9E-7 T 28-03-2018 IPR000014 PAS domain AM393_RS07715 1adc366a35f31bb64db473698d682ba7 779 Gene3D G3DSA:3.40.50.2300 514 646 1.1E-29 T 28-03-2018 AM393_RS07715 1adc366a35f31bb64db473698d682ba7 779 SUPERFAMILY SSF55874 336 504 9.69E-43 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS07715 1adc366a35f31bb64db473698d682ba7 779 Pfam PF00989 PAS fold 156 266 2.1E-17 T 28-03-2018 IPR013767 PAS fold GO:0006355 AM393_RS07715 1adc366a35f31bb64db473698d682ba7 779 Pfam PF01627 Hpt domain 687 761 1.2E-10 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AM393_RS07715 1adc366a35f31bb64db473698d682ba7 779 SUPERFAMILY SSF52172 527 645 2.85E-27 T 28-03-2018 IPR011006 CheY-like superfamily AM393_RS07715 1adc366a35f31bb64db473698d682ba7 779 PRINTS PR00344 Bacterial sensor protein C-terminal signature 492 505 1.2E-13 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM393_RS07715 1adc366a35f31bb64db473698d682ba7 779 PRINTS PR00344 Bacterial sensor protein C-terminal signature 450 460 1.2E-13 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM393_RS07715 1adc366a35f31bb64db473698d682ba7 779 PRINTS PR00344 Bacterial sensor protein C-terminal signature 468 486 1.2E-13 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM393_RS07715 1adc366a35f31bb64db473698d682ba7 779 PRINTS PR00344 Bacterial sensor protein C-terminal signature 432 446 1.2E-13 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM393_RS07715 1adc366a35f31bb64db473698d682ba7 779 Gene3D G3DSA:3.30.565.10 342 507 2.5E-45 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS07715 1adc366a35f31bb64db473698d682ba7 779 Gene3D G3DSA:1.10.287.970 3 88 1.2E-39 T 28-03-2018 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain AM393_RS07715 1adc366a35f31bb64db473698d682ba7 779 Gene3D G3DSA:1.10.287.130 278 341 1.3E-17 T 28-03-2018 AM393_RS07715 1adc366a35f31bb64db473698d682ba7 779 Gene3D G3DSA:3.30.450.20 136 277 4.0E-23 T 28-03-2018 AM393_RS07715 1adc366a35f31bb64db473698d682ba7 779 PIRSF PIRSF003182 1 779 0.0 T 28-03-2018 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB GO:0000155|GO:0000160|GO:0004673|GO:0016021 AM393_RS07715 1adc366a35f31bb64db473698d682ba7 779 Pfam PF00072 Response regulator receiver domain 529 640 9.3E-22 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM393_RS07715 1adc366a35f31bb64db473698d682ba7 779 Gene3D G3DSA:1.20.120.160 647 764 1.4E-17 T 28-03-2018 AM393_RS07715 1adc366a35f31bb64db473698d682ba7 779 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 395 505 1.2E-28 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS02310 19317c2d1a66530c23fb9c13521d87de 529 Gene3D G3DSA:3.40.50.300 2 267 1.3E-68 T 28-03-2018 AM393_RS02310 19317c2d1a66530c23fb9c13521d87de 529 Gene3D G3DSA:3.40.50.300 273 528 2.7E-68 T 28-03-2018 AM393_RS02310 19317c2d1a66530c23fb9c13521d87de 529 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS02310 19317c2d1a66530c23fb9c13521d87de 529 ProSitePatterns PS00211 ABC transporters family signature. 426 440 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS02310 19317c2d1a66530c23fb9c13521d87de 529 Pfam PF00005 ABC transporter 26 184 2.2E-25 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS02310 19317c2d1a66530c23fb9c13521d87de 529 Pfam PF00005 ABC transporter 303 454 3.3E-29 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS02310 19317c2d1a66530c23fb9c13521d87de 529 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 236 264 1.6E-4 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AM393_RS02310 19317c2d1a66530c23fb9c13521d87de 529 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 505 526 0.012 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AM393_RS02310 19317c2d1a66530c23fb9c13521d87de 529 SMART SM00382 34 234 3.2E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS02310 19317c2d1a66530c23fb9c13521d87de 529 SMART SM00382 311 502 6.3E-17 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS02310 19317c2d1a66530c23fb9c13521d87de 529 SUPERFAMILY SSF52540 276 525 1.15E-63 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS02310 19317c2d1a66530c23fb9c13521d87de 529 SUPERFAMILY SSF52540 5 256 3.26E-63 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS22995 aa1bc498405c9efb4c401b9c75804913 436 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 15 419 1.1E-124 T 28-03-2018 IPR017439 Amidohydrolase GO:0016787 AM393_RS22995 aa1bc498405c9efb4c401b9c75804913 436 SUPERFAMILY SSF55031 228 335 2.62E-22 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain AM393_RS22995 aa1bc498405c9efb4c401b9c75804913 436 PIRSF PIRSF005962 1 435 2.4E-125 T 28-03-2018 IPR017439 Amidohydrolase GO:0016787 AM393_RS22995 aa1bc498405c9efb4c401b9c75804913 436 Pfam PF07687 Peptidase dimerisation domain 231 320 1.1E-10 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain AM393_RS22995 aa1bc498405c9efb4c401b9c75804913 436 Gene3D G3DSA:3.40.630.10 1 311 1.3E-55 T 28-03-2018 AM393_RS22995 aa1bc498405c9efb4c401b9c75804913 436 Gene3D G3DSA:3.40.630.10 312 433 2.5E-13 T 28-03-2018 AM393_RS22995 aa1bc498405c9efb4c401b9c75804913 436 SUPERFAMILY SSF53187 341 430 3.18E-54 T 28-03-2018 AM393_RS22995 aa1bc498405c9efb4c401b9c75804913 436 SUPERFAMILY SSF53187 94 242 3.18E-54 T 28-03-2018 AM393_RS22995 aa1bc498405c9efb4c401b9c75804913 436 SUPERFAMILY SSF53187 3 54 3.18E-54 T 28-03-2018 AM393_RS22995 aa1bc498405c9efb4c401b9c75804913 436 Pfam PF01546 Peptidase family M20/M25/M40 112 428 1.1E-30 T 28-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 AM393_RS28155 df1689d15f163bbef6d3bf4d8db3845d 395 Gene3D G3DSA:3.40.50.300 142 393 2.8E-21 T 28-03-2018 AM393_RS28155 df1689d15f163bbef6d3bf4d8db3845d 395 SUPERFAMILY SSF52540 25 382 3.63E-42 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS28155 df1689d15f163bbef6d3bf4d8db3845d 395 Pfam PF00437 Type II/IV secretion system protein 35 315 2.5E-33 T 28-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 AM393_RS28155 df1689d15f163bbef6d3bf4d8db3845d 395 TIGRFAM TIGR02525 plasmid_TraJ: plasmid transfer ATPase TraJ 17 385 6.8E-161 T 28-03-2018 IPR013364 ATPase, plasmid transfer, TraJ AM393_RS28155 df1689d15f163bbef6d3bf4d8db3845d 395 Gene3D G3DSA:3.30.450.90 27 141 5.6E-10 T 28-03-2018 AM393_RS07815 696121f7522379888c7f580c95713095 87 SUPERFAMILY SSF159871 3 87 7.32E-27 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 AM393_RS07815 696121f7522379888c7f580c95713095 87 Gene3D G3DSA:3.30.1660.10 21 87 3.3E-24 T 28-03-2018 IPR025543 Dodecin-like AM393_RS07815 696121f7522379888c7f580c95713095 87 Pfam PF07338 Protein of unknown function (DUF1471) 35 87 7.1E-22 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 AM393_RS14375 c5988379644354b0fd315ba6df86e4b6 317 TIGRFAM TIGR00874 talAB: transaldolase 4 316 5.0E-165 T 28-03-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 AM393_RS14375 c5988379644354b0fd315ba6df86e4b6 317 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 14 313 8.0E-102 T 28-03-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 AM393_RS14375 c5988379644354b0fd315ba6df86e4b6 317 ProSitePatterns PS00958 Transaldolase active site. 129 146 - T 28-03-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 AM393_RS14375 c5988379644354b0fd315ba6df86e4b6 317 SUPERFAMILY SSF51569 1 316 3.45E-117 T 28-03-2018 AM393_RS14375 c5988379644354b0fd315ba6df86e4b6 317 ProSitePatterns PS01054 Transaldolase signature 1. 31 39 - T 28-03-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 AM393_RS14375 c5988379644354b0fd315ba6df86e4b6 317 Hamap MF_00492 Transaldolase [tal]. 2 317 52.226 T 28-03-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 AM393_RS14375 c5988379644354b0fd315ba6df86e4b6 317 Gene3D G3DSA:3.20.20.70 2 317 1.3E-122 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM393_RS27955 7bc3887fedc2d3f4bd8816c21e5d37ce 241 TIGRFAM TIGR02755 TraX_Ftype: type-F conjugative transfer system pilin acetylase TraX 18 239 3.5E-70 T 28-03-2018 IPR014125 Type-F conjugative transfer system pilin acetylase TraX AM393_RS27955 7bc3887fedc2d3f4bd8816c21e5d37ce 241 Pfam PF05857 TraX protein 25 239 2.5E-56 T 28-03-2018 IPR008875 TraX AM393_RS05895 89114e2bd8647e7d0cceb4e658940714 242 SUPERFAMILY SSF46689 7 73 4.3E-20 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS05895 89114e2bd8647e7d0cceb4e658940714 242 Gene3D G3DSA:1.10.10.10 4 69 2.1E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS05895 89114e2bd8647e7d0cceb4e658940714 242 Pfam PF01418 Helix-turn-helix domain, rpiR family 9 71 7.4E-15 T 28-03-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 AM393_RS05895 89114e2bd8647e7d0cceb4e658940714 242 Gene3D G3DSA:3.40.50.10490 70 241 3.1E-26 T 28-03-2018 AM393_RS05895 89114e2bd8647e7d0cceb4e658940714 242 SUPERFAMILY SSF53697 86 230 1.44E-30 T 28-03-2018 AM393_RS05895 89114e2bd8647e7d0cceb4e658940714 242 Pfam PF01380 SIS domain 109 224 1.5E-13 T 28-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AM393_RS05895 89114e2bd8647e7d0cceb4e658940714 242 ProSitePatterns PS00356 LacI-type HTH domain signature. 33 51 - T 28-03-2018 AM393_RS06935 e0f63aa874b218a4c9d359851efe3e90 71 Gene3D G3DSA:1.20.5.1150 16 52 1.0E-17 T 28-03-2018 AM393_RS06935 e0f63aa874b218a4c9d359851efe3e90 71 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 28-03-2018 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM393_RS06935 e0f63aa874b218a4c9d359851efe3e90 71 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 21.283 T 28-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS06935 e0f63aa874b218a4c9d359851efe3e90 71 Pfam PF01165 Ribosomal protein S21 4 56 6.3E-22 T 28-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS06935 e0f63aa874b218a4c9d359851efe3e90 71 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 2.8E-17 T 28-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS06935 e0f63aa874b218a4c9d359851efe3e90 71 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 2.8E-17 T 28-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS06935 e0f63aa874b218a4c9d359851efe3e90 71 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 2.8E-17 T 28-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS06935 e0f63aa874b218a4c9d359851efe3e90 71 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 2.8E-17 T 28-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS06935 e0f63aa874b218a4c9d359851efe3e90 71 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 4.1E-24 T 28-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS06935 e0f63aa874b218a4c9d359851efe3e90 71 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 15 56 1.0E-15 T 28-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS04665 603d12e46e5b6fa945b6a31ee77e32b9 305 Pfam PF01297 Zinc-uptake complex component A periplasmic 32 295 2.1E-72 T 28-03-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 AM393_RS04665 603d12e46e5b6fa945b6a31ee77e32b9 305 Gene3D G3DSA:3.40.50.1980 30 174 4.3E-43 T 28-03-2018 AM393_RS04665 603d12e46e5b6fa945b6a31ee77e32b9 305 Gene3D G3DSA:3.40.50.1980 175 298 8.9E-30 T 28-03-2018 AM393_RS04665 603d12e46e5b6fa945b6a31ee77e32b9 305 SUPERFAMILY SSF53807 25 298 9.32E-89 T 28-03-2018 AM393_RS04665 603d12e46e5b6fa945b6a31ee77e32b9 305 PRINTS PR00691 Adhesin B signature 184 201 6.5E-35 T 28-03-2018 IPR006129 Adhesin B GO:0007155 AM393_RS04665 603d12e46e5b6fa945b6a31ee77e32b9 305 PRINTS PR00691 Adhesin B signature 73 92 6.5E-35 T 28-03-2018 IPR006129 Adhesin B GO:0007155 AM393_RS04665 603d12e46e5b6fa945b6a31ee77e32b9 305 PRINTS PR00691 Adhesin B signature 233 250 6.5E-35 T 28-03-2018 IPR006129 Adhesin B GO:0007155 AM393_RS04665 603d12e46e5b6fa945b6a31ee77e32b9 305 PRINTS PR00691 Adhesin B signature 29 50 6.5E-35 T 28-03-2018 IPR006129 Adhesin B GO:0007155 AM393_RS04665 603d12e46e5b6fa945b6a31ee77e32b9 305 PRINTS PR00691 Adhesin B signature 210 228 6.5E-35 T 28-03-2018 IPR006129 Adhesin B GO:0007155 AM393_RS04665 603d12e46e5b6fa945b6a31ee77e32b9 305 PRINTS PR00691 Adhesin B signature 255 273 6.5E-35 T 28-03-2018 IPR006129 Adhesin B GO:0007155 AM393_RS04665 603d12e46e5b6fa945b6a31ee77e32b9 305 PRINTS PR00691 Adhesin B signature 54 72 6.5E-35 T 28-03-2018 IPR006129 Adhesin B GO:0007155 AM393_RS04665 603d12e46e5b6fa945b6a31ee77e32b9 305 PRINTS PR00690 Adhesin family signature 263 282 3.4E-41 T 28-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 AM393_RS04665 603d12e46e5b6fa945b6a31ee77e32b9 305 PRINTS PR00690 Adhesin family signature 237 255 3.4E-41 T 28-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 AM393_RS04665 603d12e46e5b6fa945b6a31ee77e32b9 305 PRINTS PR00690 Adhesin family signature 29 47 3.4E-41 T 28-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 AM393_RS04665 603d12e46e5b6fa945b6a31ee77e32b9 305 PRINTS PR00690 Adhesin family signature 60 73 3.4E-41 T 28-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 AM393_RS04665 603d12e46e5b6fa945b6a31ee77e32b9 305 PRINTS PR00690 Adhesin family signature 73 90 3.4E-41 T 28-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 AM393_RS04665 603d12e46e5b6fa945b6a31ee77e32b9 305 PRINTS PR00690 Adhesin family signature 184 205 3.4E-41 T 28-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 AM393_RS11870 2e2f915b0517611e95eb8d14515ef8cd 309 PIRSF PIRSF000450 1 308 1.8E-147 T 28-03-2018 IPR033752 MetA family KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46 AM393_RS11870 2e2f915b0517611e95eb8d14515ef8cd 309 Hamap MF_00295 Homoserine O-succinyltransferase [metA]. 1 301 52.826 T 28-03-2018 IPR005697 Homoserine O-succinyltransferase MetA GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46 AM393_RS11870 2e2f915b0517611e95eb8d14515ef8cd 309 Pfam PF04204 Homoserine O-succinyltransferase 2 299 1.4E-132 T 28-03-2018 IPR033752 MetA family KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46 AM393_RS11870 2e2f915b0517611e95eb8d14515ef8cd 309 TIGRFAM TIGR01001 metA: homoserine O-succinyltransferase 1 302 1.3E-164 T 28-03-2018 IPR005697 Homoserine O-succinyltransferase MetA GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46 AM393_RS11870 2e2f915b0517611e95eb8d14515ef8cd 309 SUPERFAMILY SSF52317 17 297 4.23E-101 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AM393_RS11870 2e2f915b0517611e95eb8d14515ef8cd 309 Gene3D G3DSA:3.40.50.880 34 301 2.2E-47 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AM393_RS11870 2e2f915b0517611e95eb8d14515ef8cd 309 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 36 289 7.0E-144 T 28-03-2018 AM393_RS10250 e6e7e704ce73569f965c82c149f406e8 140 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 1 140 5.0E-32 T 28-03-2018 AM393_RS09815 9a4b15abb9f6b05b7150cfeb358665da 336 SUPERFAMILY SSF56655 1 325 2.44E-111 T 28-03-2018 AM393_RS09815 9a4b15abb9f6b05b7150cfeb358665da 336 PIRSF PIRSF004532 1 333 9.6E-142 T 28-03-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 AM393_RS09815 9a4b15abb9f6b05b7150cfeb358665da 336 TIGRFAM TIGR00330 glpX: fructose-1,6-bisphosphatase, class II 1 333 1.1E-183 T 28-03-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 AM393_RS09815 9a4b15abb9f6b05b7150cfeb358665da 336 Gene3D G3DSA:3.30.540.10 153 336 1.9E-54 T 28-03-2018 AM393_RS09815 9a4b15abb9f6b05b7150cfeb358665da 336 Gene3D G3DSA:3.30.540.10 1 152 8.2E-59 T 28-03-2018 AM393_RS09815 9a4b15abb9f6b05b7150cfeb358665da 336 Pfam PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded 3 322 1.5E-133 T 28-03-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 AM393_RS24040 973a94de5263bc5a185216f8544d38a7 416 Pfam PF14532 Sigma-54 interaction domain 143 277 1.2E-17 T 28-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AM393_RS24040 973a94de5263bc5a185216f8544d38a7 416 SUPERFAMILY SSF52172 4 185 1.08E-37 T 28-03-2018 IPR011006 CheY-like superfamily AM393_RS24040 973a94de5263bc5a185216f8544d38a7 416 Gene3D G3DSA:3.40.50.2300 2 139 6.0E-30 T 28-03-2018 AM393_RS24040 973a94de5263bc5a185216f8544d38a7 416 SMART SM00448 6 117 1.9E-27 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM393_RS24040 973a94de5263bc5a185216f8544d38a7 416 Pfam PF00072 Response regulator receiver domain 8 117 6.4E-27 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM393_RS24040 973a94de5263bc5a185216f8544d38a7 416 Pfam PF02954 Bacterial regulatory protein, Fis family 366 406 9.4E-10 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM393_RS24040 973a94de5263bc5a185216f8544d38a7 416 SUPERFAMILY SSF52540 141 341 5.13E-26 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS24040 973a94de5263bc5a185216f8544d38a7 416 Gene3D G3DSA:3.40.50.300 140 284 5.7E-7 T 28-03-2018 AM393_RS24040 973a94de5263bc5a185216f8544d38a7 416 Gene3D G3DSA:1.10.10.60 367 413 3.2E-15 T 28-03-2018 AM393_RS24040 973a94de5263bc5a185216f8544d38a7 416 SUPERFAMILY SSF46689 353 409 9.68E-11 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS24040 973a94de5263bc5a185216f8544d38a7 416 Gene3D G3DSA:1.10.8.60 285 366 1.1E-16 T 28-03-2018 AM393_RS14875 82e5eb5db2c56c8962a9b9da7b437f5b 383 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 7 338 8.1E-142 T 28-03-2018 IPR000158 Cell division protein FtsZ GO:0005525 AM393_RS14875 82e5eb5db2c56c8962a9b9da7b437f5b 383 SUPERFAMILY SSF55307 203 319 7.33E-43 T 28-03-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 AM393_RS14875 82e5eb5db2c56c8962a9b9da7b437f5b 383 SMART SM00865 206 324 3.4E-56 T 28-03-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-1445148|Reactome: R-HSA-190840|Reactome: R-HSA-190861|Reactome: R-HSA-2132295|Reactome: R-HSA-2467813|Reactome: R-HSA-2500257|Reactome: R-HSA-3371497|Reactome: R-HSA-380320|Reactome: R-HSA-437239|Reactome: R-HSA-5617833|Reactome: R-HSA-5626467|Reactome: R-HSA-5663220|Reactome: R-HSA-6807878|Reactome: R-HSA-6811434|Reactome: R-HSA-6811436|Reactome: R-HSA-68877|Reactome: R-HSA-8852276|Reactome: R-HSA-8955332|Reactome: R-HSA-983189 AM393_RS14875 82e5eb5db2c56c8962a9b9da7b437f5b 383 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 13 172 8.1E-42 T 28-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AM393_RS14875 82e5eb5db2c56c8962a9b9da7b437f5b 383 Pfam PF12327 FtsZ family, C-terminal domain 221 315 2.4E-37 T 28-03-2018 IPR024757 Cell division protein FtsZ, C-terminal AM393_RS14875 82e5eb5db2c56c8962a9b9da7b437f5b 383 ProSitePatterns PS01134 FtsZ protein signature 1. 43 77 - T 28-03-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 AM393_RS14875 82e5eb5db2c56c8962a9b9da7b437f5b 383 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 8 343 38.192 T 28-03-2018 IPR000158 Cell division protein FtsZ GO:0005525 AM393_RS14875 82e5eb5db2c56c8962a9b9da7b437f5b 383 SUPERFAMILY SSF52490 12 207 2.09E-69 T 28-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AM393_RS14875 82e5eb5db2c56c8962a9b9da7b437f5b 383 ProSitePatterns PS01135 FtsZ protein signature 2. 96 117 - T 28-03-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 AM393_RS14875 82e5eb5db2c56c8962a9b9da7b437f5b 383 SMART SM00864 12 204 6.3E-111 T 28-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AM393_RS14875 82e5eb5db2c56c8962a9b9da7b437f5b 383 Gene3D G3DSA:3.40.50.1440 8 213 1.6E-42 T 28-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AM393_RS14875 82e5eb5db2c56c8962a9b9da7b437f5b 383 PRINTS PR00423 Cell division protein FtsZ signature 188 210 2.5E-52 T 28-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AM393_RS14875 82e5eb5db2c56c8962a9b9da7b437f5b 383 PRINTS PR00423 Cell division protein FtsZ signature 97 117 2.5E-52 T 28-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AM393_RS14875 82e5eb5db2c56c8962a9b9da7b437f5b 383 PRINTS PR00423 Cell division protein FtsZ signature 211 232 2.5E-52 T 28-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AM393_RS14875 82e5eb5db2c56c8962a9b9da7b437f5b 383 PRINTS PR00423 Cell division protein FtsZ signature 125 146 2.5E-52 T 28-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AM393_RS14875 82e5eb5db2c56c8962a9b9da7b437f5b 383 Gene3D G3DSA:3.30.1330.20 214 324 1.0E-44 T 28-03-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-1445148|Reactome: R-HSA-190840|Reactome: R-HSA-190861|Reactome: R-HSA-2132295|Reactome: R-HSA-2467813|Reactome: R-HSA-2500257|Reactome: R-HSA-3371497|Reactome: R-HSA-380320|Reactome: R-HSA-437239|Reactome: R-HSA-5617833|Reactome: R-HSA-5626467|Reactome: R-HSA-5663220|Reactome: R-HSA-6807878|Reactome: R-HSA-6811434|Reactome: R-HSA-6811436|Reactome: R-HSA-68877|Reactome: R-HSA-8852276|Reactome: R-HSA-8955332|Reactome: R-HSA-983189 AM393_RS15695 4617598918c437558a32c23e8fdc4160 482 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 282 293 - T 28-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 AM393_RS15695 4617598918c437558a32c23e8fdc4160 482 Pfam PF00171 Aldehyde dehydrogenase family 19 477 2.7E-176 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AM393_RS15695 4617598918c437558a32c23e8fdc4160 482 Gene3D G3DSA:3.40.605.10 6 273 1.4E-108 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AM393_RS15695 4617598918c437558a32c23e8fdc4160 482 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 30 476 3.1E-242 T 28-03-2018 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 Reactome: R-HSA-916853 AM393_RS15695 4617598918c437558a32c23e8fdc4160 482 Gene3D G3DSA:3.40.309.10 274 448 2.1E-73 T 28-03-2018 AM393_RS15695 4617598918c437558a32c23e8fdc4160 482 SUPERFAMILY SSF53720 5 481 2.75E-178 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AM393_RS15695 4617598918c437558a32c23e8fdc4160 482 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 254 261 - T 28-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 AM393_RS02235 2d9ca16a7ddd250a389ed751f72464c1 312 SUPERFAMILY SSF53613 7 291 4.83E-69 T 28-03-2018 IPR029056 Ribokinase-like AM393_RS02235 2d9ca16a7ddd250a389ed751f72464c1 312 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 249 262 - T 28-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AM393_RS02235 2d9ca16a7ddd250a389ed751f72464c1 312 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 5 308 3.5E-99 T 28-03-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 AM393_RS02235 2d9ca16a7ddd250a389ed751f72464c1 312 TIGRFAM TIGR03828 pfkB: 1-phosphofructokinase 5 308 1.6E-101 T 28-03-2018 IPR022463 Fructose 1-phosphate kinase GO:0008662 KEGG: 00051+2.7.1.56 AM393_RS02235 2d9ca16a7ddd250a389ed751f72464c1 312 Gene3D G3DSA:2.20.150.10 12 46 1.5E-10 T 28-03-2018 IPR023314 Tagatose-6-phosphate kinase/1-phosphofructokinase N-terminal domain AM393_RS02235 2d9ca16a7ddd250a389ed751f72464c1 312 Pfam PF00294 pfkB family carbohydrate kinase 14 293 3.4E-68 T 28-03-2018 IPR011611 Carbohydrate kinase PfkB AM393_RS02235 2d9ca16a7ddd250a389ed751f72464c1 312 PIRSF PIRSF000535 2 311 7.3E-117 T 28-03-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 AM393_RS02235 2d9ca16a7ddd250a389ed751f72464c1 312 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 39 63 - T 28-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AM393_RS02235 2d9ca16a7ddd250a389ed751f72464c1 312 Gene3D G3DSA:3.40.1190.20 47 312 7.0E-54 T 28-03-2018 IPR029056 Ribokinase-like AM393_RS04155 9c236d26dbd185182c3f4d453ac7f5d1 222 PRINTS PR00969 Pili chaperone signature 117 132 9.1E-30 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM393_RS04155 9c236d26dbd185182c3f4d453ac7f5d1 222 PRINTS PR00969 Pili chaperone signature 20 29 9.1E-30 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM393_RS04155 9c236d26dbd185182c3f4d453ac7f5d1 222 PRINTS PR00969 Pili chaperone signature 152 167 9.1E-30 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM393_RS04155 9c236d26dbd185182c3f4d453ac7f5d1 222 PRINTS PR00969 Pili chaperone signature 66 87 9.1E-30 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM393_RS04155 9c236d26dbd185182c3f4d453ac7f5d1 222 PRINTS PR00969 Pili chaperone signature 94 111 9.1E-30 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM393_RS04155 9c236d26dbd185182c3f4d453ac7f5d1 222 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 20 135 2.2E-38 T 28-03-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 AM393_RS04155 9c236d26dbd185182c3f4d453ac7f5d1 222 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 158 216 2.6E-7 T 28-03-2018 IPR016148 Pili assembly chaperone, C-terminal AM393_RS04155 9c236d26dbd185182c3f4d453ac7f5d1 222 SUPERFAMILY SSF49354 16 135 3.4E-39 T 28-03-2018 IPR008962 PapD-like AM393_RS04155 9c236d26dbd185182c3f4d453ac7f5d1 222 SUPERFAMILY SSF49584 139 218 6.93E-14 T 28-03-2018 IPR016148 Pili assembly chaperone, C-terminal AM393_RS04155 9c236d26dbd185182c3f4d453ac7f5d1 222 Gene3D G3DSA:2.60.40.10 138 220 5.6E-14 T 28-03-2018 IPR013783 Immunoglobulin-like fold AM393_RS04155 9c236d26dbd185182c3f4d453ac7f5d1 222 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 93 110 - T 28-03-2018 IPR018046 Pili assembly chaperone, conserved site AM393_RS04155 9c236d26dbd185182c3f4d453ac7f5d1 222 Gene3D G3DSA:2.60.40.10 19 136 7.1E-36 T 28-03-2018 IPR013783 Immunoglobulin-like fold AM393_RS10980 f9360873d03520b897935a4da2fb1fca 176 Gene3D G3DSA:3.60.20.10 2 172 9.7E-32 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AM393_RS10980 f9360873d03520b897935a4da2fb1fca 176 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 1 172 41.801 T 28-03-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 AM393_RS10980 f9360873d03520b897935a4da2fb1fca 176 PIRSF PIRSF039093 1 175 7.0E-88 T 28-03-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 AM393_RS10980 f9360873d03520b897935a4da2fb1fca 176 SUPERFAMILY SSF56235 2 172 1.06E-58 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AM393_RS10980 f9360873d03520b897935a4da2fb1fca 176 Pfam PF00227 Proteasome subunit 2 167 5.2E-23 T 28-03-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-446652|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8941858|Reactome: R-HSA-8951664|Reactome: R-HSA-983168 AM393_RS10980 f9360873d03520b897935a4da2fb1fca 176 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 2 172 1.5E-86 T 28-03-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 AM393_RS05860 be514936035a62e7adc876c8c00f5d36 298 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 6 298 59.729 T 28-03-2018 IPR023009 Tyrosine recombinase XerC/XerD AM393_RS05860 be514936035a62e7adc876c8c00f5d36 298 Gene3D G3DSA:1.10.150.130 4 111 2.6E-22 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal AM393_RS05860 be514936035a62e7adc876c8c00f5d36 298 Gene3D G3DSA:1.10.443.10 112 292 4.3E-51 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM393_RS05860 be514936035a62e7adc876c8c00f5d36 298 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 8 90 9.5E-26 T 28-03-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 AM393_RS05860 be514936035a62e7adc876c8c00f5d36 298 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 4 298 65.285 T 28-03-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 AM393_RS05860 be514936035a62e7adc876c8c00f5d36 298 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 9 298 9.5E-120 T 28-03-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 AM393_RS05860 be514936035a62e7adc876c8c00f5d36 298 Pfam PF00589 Phage integrase family 113 284 6.1E-56 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM393_RS05860 be514936035a62e7adc876c8c00f5d36 298 SUPERFAMILY SSF56349 7 290 6.47E-60 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AM393_RS14715 2c92024b7cf0f3d1d71f98d3e1bce549 394 SUPERFAMILY SSF103473 13 389 1.44E-45 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS14715 2c92024b7cf0f3d1d71f98d3e1bce549 394 Pfam PF07690 Major Facilitator Superfamily 19 304 4.5E-27 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS14715 2c92024b7cf0f3d1d71f98d3e1bce549 394 TIGRFAM TIGR00899 2A0120: sugar efflux transporter 17 393 6.2E-166 T 28-03-2018 IPR004750 Sugar efflux GO:0008643|GO:0015542|GO:0016021 AM393_RS14715 2c92024b7cf0f3d1d71f98d3e1bce549 394 Gene3D G3DSA:1.20.1250.20 217 393 8.8E-22 T 28-03-2018 AM393_RS14715 2c92024b7cf0f3d1d71f98d3e1bce549 394 Gene3D G3DSA:1.20.1250.20 2 216 4.2E-18 T 28-03-2018 AM393_RS13010 1069dbb3315b909c9843588c0f2365d8 445 Gene3D G3DSA:3.10.580.10 193 343 3.7E-21 T 28-03-2018 AM393_RS13010 1069dbb3315b909c9843588c0f2365d8 445 Pfam PF01595 Domain of unknown function DUF21 7 197 7.4E-40 T 28-03-2018 IPR002550 Domain of unknown function DUF21 AM393_RS13010 1069dbb3315b909c9843588c0f2365d8 445 Pfam PF03471 Transporter associated domain 347 425 2.9E-22 T 28-03-2018 IPR005170 Transporter-associated domain AM393_RS13010 1069dbb3315b909c9843588c0f2365d8 445 SUPERFAMILY SSF54631 200 335 2.51E-22 T 28-03-2018 AM393_RS13010 1069dbb3315b909c9843588c0f2365d8 445 Pfam PF00571 CBS domain 284 333 0.0025 T 28-03-2018 IPR000644 CBS domain AM393_RS13010 1069dbb3315b909c9843588c0f2365d8 445 SMART SM01091 346 426 4.4E-29 T 28-03-2018 IPR005170 Transporter-associated domain AM393_RS13010 1069dbb3315b909c9843588c0f2365d8 445 SUPERFAMILY SSF56176 344 428 4.91E-24 T 28-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AM393_RS13010 1069dbb3315b909c9843588c0f2365d8 445 Gene3D G3DSA:3.30.465.10 344 426 3.6E-24 T 28-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AM393_RS06035 3afe06291b4eb93d78f7fa6940212d32 422 Pfam PF03573 outer membrane porin, OprD family 27 420 2.9E-124 T 28-03-2018 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 AM393_RS06035 3afe06291b4eb93d78f7fa6940212d32 422 Gene3D G3DSA:2.40.160.10 1 422 1.5E-112 T 28-03-2018 AM393_RS14165 02cb7aacc66a84480a1f8dbb1a9c23a9 342 Hamap MF_01862 Ribosomal RNA small subunit methyltransferase C [rsmC]. 4 336 45.728 T 28-03-2018 IPR023543 rRNA small subunit methyltransferase C GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AM393_RS14165 02cb7aacc66a84480a1f8dbb1a9c23a9 342 Gene3D G3DSA:3.40.50.150 159 342 2.1E-35 T 28-03-2018 AM393_RS14165 02cb7aacc66a84480a1f8dbb1a9c23a9 342 Pfam PF08468 Methyltransferase small domain N-terminal 8 162 1.5E-56 T 28-03-2018 IPR013675 Methyltransferase small, N-terminal GO:0006364|GO:0008990 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AM393_RS14165 02cb7aacc66a84480a1f8dbb1a9c23a9 342 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 265 271 - T 28-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AM393_RS14165 02cb7aacc66a84480a1f8dbb1a9c23a9 342 Pfam PF05175 Methyltransferase small domain 166 333 5.7E-61 T 28-03-2018 IPR007848 Methyltransferase small domain GO:0008168 AM393_RS14165 02cb7aacc66a84480a1f8dbb1a9c23a9 342 SUPERFAMILY SSF53335 107 325 5.53E-32 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM393_RS26340 860a4145fc29b321224afb62bbd617e5 369 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 59 261 1.2E-12 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AM393_RS26340 860a4145fc29b321224afb62bbd617e5 369 SUPERFAMILY SSF111369 51 261 7.32E-20 T 28-03-2018 AM393_RS26340 860a4145fc29b321224afb62bbd617e5 369 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 37 356 5.1E-59 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AM393_RS26340 860a4145fc29b321224afb62bbd617e5 369 Gene3D G3DSA:3.90.1170.30 38 108 5.4E-4 T 28-03-2018 AM393_RS26340 860a4145fc29b321224afb62bbd617e5 369 Gene3D G3DSA:1.10.287.470 109 161 1.3E-9 T 28-03-2018 AM393_RS26340 860a4145fc29b321224afb62bbd617e5 369 Gene3D G3DSA:2.40.50.100 169 344 6.3E-6 T 28-03-2018 AM393_RS24795 5019e7dd6d59687157ad29d83b18f870 336 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 131 1.2E-29 T 28-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AM393_RS24795 5019e7dd6d59687157ad29d83b18f870 336 SUPERFAMILY SSF51735 135 302 4.76E-39 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS24795 5019e7dd6d59687157ad29d83b18f870 336 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 57 71 - T 28-03-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 AM393_RS24795 5019e7dd6d59687157ad29d83b18f870 336 Pfam PF00107 Zinc-binding dehydrogenase 172 298 1.4E-27 T 28-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AM393_RS24795 5019e7dd6d59687157ad29d83b18f870 336 SMART SM00829 7 332 2.8E-7 T 28-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AM393_RS24795 5019e7dd6d59687157ad29d83b18f870 336 SUPERFAMILY SSF50129 1 169 1.83E-46 T 28-03-2018 IPR011032 GroES-like AM393_RS24795 5019e7dd6d59687157ad29d83b18f870 336 Gene3D G3DSA:3.90.180.10 1 144 3.6E-44 T 28-03-2018 AM393_RS24795 5019e7dd6d59687157ad29d83b18f870 336 Gene3D G3DSA:3.40.50.720 145 327 3.0E-33 T 28-03-2018 AM393_RS09770 7584fba11ac6676c0a4d3a90a07672af 352 PIRSF PIRSF000409 1 351 6.9E-136 T 28-03-2018 IPR016221 Bifunctional regulatory protein Ada AM393_RS09770 7584fba11ac6676c0a4d3a90a07672af 352 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 266 345 3.8E-27 T 28-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 AM393_RS09770 7584fba11ac6676c0a4d3a90a07672af 352 Gene3D G3DSA:1.10.10.60 77 132 2.3E-4 T 28-03-2018 AM393_RS09770 7584fba11ac6676c0a4d3a90a07672af 352 SMART SM00342 99 180 2.9E-10 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM393_RS09770 7584fba11ac6676c0a4d3a90a07672af 352 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 189 260 9.9E-8 T 28-03-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 AM393_RS09770 7584fba11ac6676c0a4d3a90a07672af 352 Pfam PF02805 Metal binding domain of Ada 13 74 3.8E-26 T 28-03-2018 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 AM393_RS09770 7584fba11ac6676c0a4d3a90a07672af 352 Gene3D G3DSA:1.10.10.60 133 177 1.0E-4 T 28-03-2018 AM393_RS09770 7584fba11ac6676c0a4d3a90a07672af 352 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 315 321 - T 28-03-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 AM393_RS09770 7584fba11ac6676c0a4d3a90a07672af 352 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 266 344 6.1E-33 T 28-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 AM393_RS09770 7584fba11ac6676c0a4d3a90a07672af 352 SUPERFAMILY SSF53155 185 261 1.84E-15 T 28-03-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 AM393_RS09770 7584fba11ac6676c0a4d3a90a07672af 352 SUPERFAMILY SSF57884 1 88 6.02E-30 T 28-03-2018 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 AM393_RS09770 7584fba11ac6676c0a4d3a90a07672af 352 Gene3D G3DSA:3.40.10.10 1 76 2.8E-21 T 28-03-2018 IPR035451 Ada-like domain AM393_RS09770 7584fba11ac6676c0a4d3a90a07672af 352 Pfam PF12833 Helix-turn-helix domain 106 180 7.7E-14 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM393_RS09770 7584fba11ac6676c0a4d3a90a07672af 352 Gene3D G3DSA:3.30.160.70 178 260 1.1E-19 T 28-03-2018 AM393_RS09770 7584fba11ac6676c0a4d3a90a07672af 352 SUPERFAMILY SSF46689 135 182 3.52E-6 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS09770 7584fba11ac6676c0a4d3a90a07672af 352 Gene3D G3DSA:1.10.10.10 261 347 7.9E-29 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS09770 7584fba11ac6676c0a4d3a90a07672af 352 SUPERFAMILY SSF46767 264 345 5.49E-26 T 28-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 AM393_RS09330 eec94b7ad99a07e762103aec908824ba 776 Gene3D G3DSA:3.40.228.10 537 619 8.7E-11 T 28-03-2018 AM393_RS09330 eec94b7ad99a07e762103aec908824ba 776 Gene3D G3DSA:3.40.228.10 151 411 1.2E-57 T 28-03-2018 AM393_RS09330 eec94b7ad99a07e762103aec908824ba 776 TIGRFAM TIGR00509 bisC_fam: molybdopterin guanine dinucleotide-containing S/N-oxide reductases 13 775 0.0 T 28-03-2018 IPR006658 Molybdopterin guanine dinucleotide-containing S/N-oxide reductase GO:0016491|GO:0055114 AM393_RS09330 eec94b7ad99a07e762103aec908824ba 776 Pfam PF00384 Molybdopterin oxidoreductase 56 517 3.9E-104 T 28-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM393_RS09330 eec94b7ad99a07e762103aec908824ba 776 Gene3D G3DSA:3.40.228.10 412 514 3.9E-6 T 28-03-2018 AM393_RS09330 eec94b7ad99a07e762103aec908824ba 776 SUPERFAMILY SSF53706 14 628 5.89E-157 T 28-03-2018 AM393_RS09330 eec94b7ad99a07e762103aec908824ba 776 Pfam PF01568 Molydopterin dinucleotide binding domain 636 748 1.2E-26 T 28-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 AM393_RS09330 eec94b7ad99a07e762103aec908824ba 776 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 459 476 - T 28-03-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 AM393_RS09330 eec94b7ad99a07e762103aec908824ba 776 Gene3D G3DSA:3.90.55.10 7 92 1.1E-10 T 28-03-2018 AM393_RS09330 eec94b7ad99a07e762103aec908824ba 776 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 675 702 - T 28-03-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 AM393_RS09330 eec94b7ad99a07e762103aec908824ba 776 SUPERFAMILY SSF50692 629 773 4.29E-42 T 28-03-2018 IPR009010 Aspartate decarboxylase-like domain AM393_RS09330 eec94b7ad99a07e762103aec908824ba 776 Gene3D G3DSA:2.40.40.20 620 770 2.1E-33 T 28-03-2018 AM393_RS07705 b7ddc67660e2461249a8ba6d0f1f26c8 241 Hamap MF_00766 Monofunctional biosynthetic peptidoglycan transglycosylase [mtgA]. 7 232 43.282 T 28-03-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 AM393_RS07705 b7ddc67660e2461249a8ba6d0f1f26c8 241 TIGRFAM TIGR02070 mono_pep_trsgly: monofunctional biosynthetic peptidoglycan transglycosylase 15 230 2.9E-85 T 28-03-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 AM393_RS07705 b7ddc67660e2461249a8ba6d0f1f26c8 241 Gene3D G3DSA:1.10.3810.10 48 236 2.2E-57 T 28-03-2018 IPR001264 Glycosyl transferase, family 51 AM393_RS07705 b7ddc67660e2461249a8ba6d0f1f26c8 241 Pfam PF00912 Transglycosylase 61 226 5.6E-51 T 28-03-2018 IPR001264 Glycosyl transferase, family 51 AM393_RS07705 b7ddc67660e2461249a8ba6d0f1f26c8 241 SUPERFAMILY SSF53955 53 230 3.66E-62 T 28-03-2018 IPR023346 Lysozyme-like domain AM393_RS14975 6131357282a51a8293647f996368e771 632 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 401 631 8.2E-79 T 28-03-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 AM393_RS14975 6131357282a51a8293647f996368e771 632 SUPERFAMILY SSF51230 106 198 1.16E-23 T 28-03-2018 IPR011053 Single hybrid motif AM393_RS14975 6131357282a51a8293647f996368e771 632 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 25 54 - T 28-03-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 AM393_RS14975 6131357282a51a8293647f996368e771 632 SUPERFAMILY SSF47005 322 367 2.22E-13 T 28-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 AM393_RS14975 6131357282a51a8293647f996368e771 632 Gene3D G3DSA:3.30.559.10 388 632 6.3E-79 T 28-03-2018 AM393_RS14975 6131357282a51a8293647f996368e771 632 Gene3D G3DSA:4.10.320.10 326 382 1.6E-20 T 28-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 AM393_RS14975 6131357282a51a8293647f996368e771 632 SUPERFAMILY SSF52777 390 631 5.34E-80 T 28-03-2018 AM393_RS14975 6131357282a51a8293647f996368e771 632 Gene3D G3DSA:2.40.50.100 248 325 3.4E-9 T 28-03-2018 AM393_RS14975 6131357282a51a8293647f996368e771 632 Pfam PF00364 Biotin-requiring enzyme 4 73 4.8E-22 T 28-03-2018 IPR000089 Biotin/lipoyl attachment AM393_RS14975 6131357282a51a8293647f996368e771 632 Pfam PF00364 Biotin-requiring enzyme 107 177 4.7E-22 T 28-03-2018 IPR000089 Biotin/lipoyl attachment AM393_RS14975 6131357282a51a8293647f996368e771 632 Pfam PF00364 Biotin-requiring enzyme 208 277 5.8E-22 T 28-03-2018 IPR000089 Biotin/lipoyl attachment AM393_RS14975 6131357282a51a8293647f996368e771 632 Pfam PF02817 e3 binding domain 328 363 2.1E-15 T 28-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 AM393_RS14975 6131357282a51a8293647f996368e771 632 SUPERFAMILY SSF51230 206 298 1.96E-23 T 28-03-2018 IPR011053 Single hybrid motif AM393_RS14975 6131357282a51a8293647f996368e771 632 TIGRFAM TIGR01348 PDHac_trf_long: dihydrolipoyllysine-residue acetyltransferase 190 632 3.1E-231 T 28-03-2018 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex GO:0004742|GO:0006096|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 AM393_RS14975 6131357282a51a8293647f996368e771 632 Gene3D G3DSA:3.90.1170.30 1 43 3.1E-9 T 28-03-2018 AM393_RS14975 6131357282a51a8293647f996368e771 632 Gene3D G3DSA:3.90.1170.30 44 147 3.1E-23 T 28-03-2018 AM393_RS14975 6131357282a51a8293647f996368e771 632 Gene3D G3DSA:3.90.1170.30 148 247 1.2E-22 T 28-03-2018 AM393_RS14975 6131357282a51a8293647f996368e771 632 SUPERFAMILY SSF51230 1 93 6.15E-23 T 28-03-2018 IPR011053 Single hybrid motif AM393_RS14975 6131357282a51a8293647f996368e771 632 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 229 258 - T 28-03-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 AM393_RS14975 6131357282a51a8293647f996368e771 632 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 129 158 - T 28-03-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 AM393_RS16930 716174208d1d88565727b5d77e4b4704 387 Pfam PF00589 Phage integrase family 185 353 4.9E-41 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM393_RS16930 716174208d1d88565727b5d77e4b4704 387 Gene3D G3DSA:1.10.150.130 55 185 1.6E-11 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal AM393_RS16930 716174208d1d88565727b5d77e4b4704 387 Gene3D G3DSA:1.10.443.10 186 367 8.3E-40 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM393_RS16930 716174208d1d88565727b5d77e4b4704 387 SUPERFAMILY SSF56349 58 111 5.89E-50 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AM393_RS16930 716174208d1d88565727b5d77e4b4704 387 SUPERFAMILY SSF56349 139 361 5.89E-50 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AM393_RS27060 73b9fa0ed94d556b48c8fb4f290d8260 161 Pfam PF01464 Transglycosylase SLT domain 22 137 5.2E-23 T 28-03-2018 IPR008258 Transglycosylase SLT domain 1 AM393_RS27060 73b9fa0ed94d556b48c8fb4f290d8260 161 SUPERFAMILY SSF53955 18 141 1.21E-29 T 28-03-2018 IPR023346 Lysozyme-like domain AM393_RS27060 73b9fa0ed94d556b48c8fb4f290d8260 161 Gene3D G3DSA:1.10.530.10 15 160 1.9E-21 T 28-03-2018 AM393_RS13855 738c4c04c898cafb35b07481be322dec 318 Gene3D G3DSA:3.30.1220.10 209 318 5.2E-20 T 28-03-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AM393_RS13855 738c4c04c898cafb35b07481be322dec 318 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 224 315 1.3E-18 T 28-03-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AM393_RS13855 738c4c04c898cafb35b07481be322dec 318 Gene3D G3DSA:3.40.50.300 1 202 3.5E-46 T 28-03-2018 AM393_RS13855 738c4c04c898cafb35b07481be322dec 318 SUPERFAMILY SSF52540 3 201 2.86E-45 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS13855 738c4c04c898cafb35b07481be322dec 318 SUPERFAMILY SSF90002 224 315 5.23E-25 T 28-03-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AM393_RS13855 738c4c04c898cafb35b07481be322dec 318 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 6 182 8.2E-51 T 28-03-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain AM393_RS13855 738c4c04c898cafb35b07481be322dec 318 SMART SM00833 224 317 2.7E-10 T 28-03-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AM393_RS21250 abee8c334ef7b374c1644fcc9604dbae 284 PRINTS PR00069 Aldo-keto reductase signature 206 230 4.4E-14 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM393_RS21250 abee8c334ef7b374c1644fcc9604dbae 284 PRINTS PR00069 Aldo-keto reductase signature 97 115 4.4E-14 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM393_RS21250 abee8c334ef7b374c1644fcc9604dbae 284 PRINTS PR00069 Aldo-keto reductase signature 127 144 4.4E-14 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM393_RS21250 abee8c334ef7b374c1644fcc9604dbae 284 Gene3D G3DSA:3.20.20.100 2 284 3.9E-86 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM393_RS21250 abee8c334ef7b374c1644fcc9604dbae 284 PIRSF PIRSF000097 1 283 2.8E-39 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM393_RS21250 abee8c334ef7b374c1644fcc9604dbae 284 SUPERFAMILY SSF51430 4 274 2.88E-82 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM393_RS21250 abee8c334ef7b374c1644fcc9604dbae 284 Pfam PF00248 Aldo/keto reductase family 17 271 5.3E-57 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM393_RS03825 b3e6a86219d163849af5584a42d73e2f 443 Gene3D G3DSA:3.40.50.300 228 440 1.2E-46 T 28-03-2018 AM393_RS03825 b3e6a86219d163849af5584a42d73e2f 443 Pfam PF00271 Helicase conserved C-terminal domain 235 343 3.1E-30 T 28-03-2018 IPR001650 Helicase, C-terminal AM393_RS03825 b3e6a86219d163849af5584a42d73e2f 443 Hamap MF_00967 ATP-dependent RNA helicase SrmB [srmB]. 4 427 50.406 T 28-03-2018 IPR028621 ATP-dependent RNA helicase SrmB GO:0000027|GO:0004004 AM393_RS03825 b3e6a86219d163849af5584a42d73e2f 443 SMART SM00490 262 343 7.3E-32 T 28-03-2018 IPR001650 Helicase, C-terminal AM393_RS03825 b3e6a86219d163849af5584a42d73e2f 443 Pfam PF00270 DEAD/DEAH box helicase 28 198 1.9E-46 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AM393_RS03825 b3e6a86219d163849af5584a42d73e2f 443 SMART SM00487 23 223 8.9E-59 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AM393_RS03825 b3e6a86219d163849af5584a42d73e2f 443 SUPERFAMILY SSF52540 76 358 2.79E-68 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS03825 b3e6a86219d163849af5584a42d73e2f 443 Gene3D G3DSA:3.40.50.300 1 227 2.4E-59 T 28-03-2018 AM393_RS03825 b3e6a86219d163849af5584a42d73e2f 443 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 155 163 - T 28-03-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AM393_RS18885 b8093a0efae723a51e776713de2a74df 331 Hamap MF_01605 6-phosphogluconolactonase [pgl]. 1 331 55.897 T 28-03-2018 IPR022528 6-phosphogluconolactonase, YbhE-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31 AM393_RS18885 b8093a0efae723a51e776713de2a74df 331 SUPERFAMILY SSF50974 68 330 3.14E-52 T 28-03-2018 IPR011045 Nitrous oxide reductase, N-terminal Reactome: R-HSA-114608 AM393_RS18885 b8093a0efae723a51e776713de2a74df 331 Pfam PF10282 Lactonase, 7-bladed beta-propeller 6 327 1.4E-87 T 28-03-2018 IPR019405 Lactonase, 7-bladed beta propeller AM393_RS18885 b8093a0efae723a51e776713de2a74df 331 Gene3D G3DSA:2.130.10.10 2 331 2.2E-51 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 AM393_RS18885 b8093a0efae723a51e776713de2a74df 331 SUPERFAMILY SSF50974 3 73 4.45E-6 T 28-03-2018 IPR011045 Nitrous oxide reductase, N-terminal Reactome: R-HSA-114608 AM393_RS11895 b97638c057ec6fa1529c04df5c1dbbfe 1227 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 938 1208 2.1E-126 T 28-03-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM393_RS11895 b97638c057ec6fa1529c04df5c1dbbfe 1227 SUPERFAMILY SSF47644 653 739 7.85E-29 T 28-03-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM393_RS11895 b97638c057ec6fa1529c04df5c1dbbfe 1227 Gene3D G3DSA:3.20.20.20 345 644 3.4E-75 T 28-03-2018 AM393_RS11895 b97638c057ec6fa1529c04df5c1dbbfe 1227 TIGRFAM TIGR02082 metH: methionine synthase 12 1192 0.0 T 28-03-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM393_RS11895 b97638c057ec6fa1529c04df5c1dbbfe 1227 Pfam PF02607 B12 binding domain 660 733 3.5E-25 T 28-03-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM393_RS11895 b97638c057ec6fa1529c04df5c1dbbfe 1227 SUPERFAMILY SSF56507 903 1226 4.84E-134 T 28-03-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM393_RS11895 b97638c057ec6fa1529c04df5c1dbbfe 1227 SMART SM01018 657 740 7.7E-45 T 28-03-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM393_RS11895 b97638c057ec6fa1529c04df5c1dbbfe 1227 SUPERFAMILY SSF52242 742 894 6.15E-48 T 28-03-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 AM393_RS11895 b97638c057ec6fa1529c04df5c1dbbfe 1227 SUPERFAMILY SSF82282 7 399 8.5E-120 T 28-03-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 AM393_RS11895 b97638c057ec6fa1529c04df5c1dbbfe 1227 Gene3D G3DSA:1.10.1240.10 652 737 1.2E-37 T 28-03-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM393_RS11895 b97638c057ec6fa1529c04df5c1dbbfe 1227 Pfam PF00809 Pterin binding enzyme 360 598 8.6E-63 T 28-03-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM393_RS11895 b97638c057ec6fa1529c04df5c1dbbfe 1227 Pfam PF02310 B12 binding domain 748 840 3.4E-18 T 28-03-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 AM393_RS11895 b97638c057ec6fa1529c04df5c1dbbfe 1227 PIRSF PIRSF000381 1 1195 0.0 T 28-03-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM393_RS11895 b97638c057ec6fa1529c04df5c1dbbfe 1227 Gene3D G3DSA:3.20.20.330 1 341 8.2E-113 T 28-03-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 AM393_RS11895 b97638c057ec6fa1529c04df5c1dbbfe 1227 Gene3D G3DSA:3.40.50.280 743 895 7.4E-56 T 28-03-2018 AM393_RS11895 b97638c057ec6fa1529c04df5c1dbbfe 1227 Pfam PF02574 Homocysteine S-methyltransferase 17 325 1.6E-80 T 28-03-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 AM393_RS11895 b97638c057ec6fa1529c04df5c1dbbfe 1227 SUPERFAMILY SSF51717 356 630 4.06E-89 T 28-03-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM393_RS11895 b97638c057ec6fa1529c04df5c1dbbfe 1227 Gene3D G3DSA:3.10.196.10 956 1080 8.4E-46 T 28-03-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM393_RS11895 b97638c057ec6fa1529c04df5c1dbbfe 1227 Gene3D G3DSA:3.10.196.10 1081 1227 1.2E-63 T 28-03-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM393_RS05625 015548979a4ee480c4ee6ab7ccd83d92 828 SUPERFAMILY SSF141729 60 172 4.97E-24 T 28-03-2018 AM393_RS05625 015548979a4ee480c4ee6ab7ccd83d92 828 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 311 321 - T 28-03-2018 IPR018030 Fimbrial membrane usher, conserved site AM393_RS05625 015548979a4ee480c4ee6ab7ccd83d92 828 Pfam PF13953 PapC C-terminal domain 761 816 4.4E-8 T 28-03-2018 IPR025949 PapC-like, C-terminal domain AM393_RS05625 015548979a4ee480c4ee6ab7ccd83d92 828 Pfam PF00577 Outer membrane usher protein 198 751 1.9E-188 T 28-03-2018 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 AM393_RS05625 015548979a4ee480c4ee6ab7ccd83d92 828 Pfam PF13954 PapC N-terminal domain 37 181 1.2E-35 T 28-03-2018 IPR025885 PapC, N-terminal domain GO:0005515 AM393_RS09015 308885b6c64a64ba166bfca6aca3ccf2 522 Gene3D G3DSA:3.10.105.10 276 491 1.8E-52 T 28-03-2018 AM393_RS09015 308885b6c64a64ba166bfca6aca3ccf2 522 SUPERFAMILY SSF53850 26 508 1.43E-122 T 28-03-2018 AM393_RS09015 308885b6c64a64ba166bfca6aca3ccf2 522 Gene3D G3DSA:3.90.76.10 33 177 6.0E-29 T 28-03-2018 AM393_RS09015 308885b6c64a64ba166bfca6aca3ccf2 522 Gene3D G3DSA:3.40.190.10 178 275 2.8E-24 T 28-03-2018 AM393_RS09015 308885b6c64a64ba166bfca6aca3ccf2 522 TIGRFAM TIGR02294 nickel_nikA: nickel ABC transporter, nickel/metallophore periplasmic binding protein 22 517 8.8E-219 T 28-03-2018 IPR011980 Nickel ABC transporter, substrate-binding protein NikA GO:0015675|GO:0016151|GO:0020037 AM393_RS09015 308885b6c64a64ba166bfca6aca3ccf2 522 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 66 431 1.7E-86 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain AM393_RS09015 308885b6c64a64ba166bfca6aca3ccf2 522 PIRSF PIRSF002741 19 517 1.3E-85 T 28-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AM393_RS00940 428d520b01af68385080580e32966b69 74 Pfam PF10733 Protein of unknown function (DUF2525) 17 74 7.5E-31 T 28-03-2018 IPR019669 Uncharacterised bacterial stress protein YodD AM393_RS25175 910e19a79101684170b0616a54bd3166 475 Gene3D G3DSA:3.40.605.10 1 259 3.2E-94 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AM393_RS25175 910e19a79101684170b0616a54bd3166 475 Gene3D G3DSA:3.40.309.10 260 456 1.0E-64 T 28-03-2018 AM393_RS25175 910e19a79101684170b0616a54bd3166 475 Pfam PF00171 Aldehyde dehydrogenase family 13 470 4.3E-164 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AM393_RS25175 910e19a79101684170b0616a54bd3166 475 Hamap MF_01275 Gamma-aminobutyraldehyde dehydrogenase [prr]. 1 474 78.289 T 28-03-2018 IPR017749 1-pyrroline dehydrogenase GO:0009447|GO:0019145|GO:0051287|GO:0055114 KEGG: 00330+1.2.1.19|KEGG: 00410+1.2.1.19|MetaCyc: PWY-2|MetaCyc: PWY-3 AM393_RS25175 910e19a79101684170b0616a54bd3166 475 SUPERFAMILY SSF53720 2 473 6.68E-156 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AM393_RS25175 910e19a79101684170b0616a54bd3166 475 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 245 252 - T 28-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 AM393_RS25175 910e19a79101684170b0616a54bd3166 475 TIGRFAM TIGR03374 ABALDH: 1-pyrroline dehydrogenase 2 473 4.9E-294 T 28-03-2018 IPR017749 1-pyrroline dehydrogenase GO:0009447|GO:0019145|GO:0051287|GO:0055114 KEGG: 00330+1.2.1.19|KEGG: 00410+1.2.1.19|MetaCyc: PWY-2|MetaCyc: PWY-3 AM393_RS07570 4b8140b1f6c3582fab27d375dc26833e 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 83 157 1.0E-29 T 28-03-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 AM393_RS07570 4b8140b1f6c3582fab27d375dc26833e 158 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 28-03-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 AM393_RS07570 4b8140b1f6c3582fab27d375dc26833e 158 Gene3D G3DSA:1.10.287.180 3 75 1.2E-33 T 28-03-2018 AM393_RS07570 4b8140b1f6c3582fab27d375dc26833e 158 Gene3D G3DSA:3.10.50.30 76 158 3.3E-29 T 28-03-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 AM393_RS07570 4b8140b1f6c3582fab27d375dc26833e 158 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 156 1.3E-61 T 28-03-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 AM393_RS07570 4b8140b1f6c3582fab27d375dc26833e 158 Pfam PF03449 Transcription elongation factor, N-terminal 4 74 1.6E-32 T 28-03-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 AM393_RS07570 4b8140b1f6c3582fab27d375dc26833e 158 SUPERFAMILY SSF54534 81 157 4.71E-25 T 28-03-2018 AM393_RS07570 4b8140b1f6c3582fab27d375dc26833e 158 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 156 34.249 T 28-03-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 AM393_RS07570 4b8140b1f6c3582fab27d375dc26833e 158 PIRSF PIRSF006092 1 158 2.3E-56 T 28-03-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 AM393_RS07570 4b8140b1f6c3582fab27d375dc26833e 158 SUPERFAMILY SSF46557 3 78 1.57E-29 T 28-03-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 AM393_RS07570 4b8140b1f6c3582fab27d375dc26833e 158 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 121 137 - T 28-03-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 AM393_RS00395 7ce64bb6b057a2429a4052f56c364e44 527 Gene3D G3DSA:3.20.20.450 261 520 6.7E-72 T 28-03-2018 IPR001633 EAL domain AM393_RS00395 7ce64bb6b057a2429a4052f56c364e44 527 SMART SM00052 265 506 7.2E-95 T 28-03-2018 IPR001633 EAL domain AM393_RS00395 7ce64bb6b057a2429a4052f56c364e44 527 SUPERFAMILY SSF141868 272 514 5.49E-71 T 28-03-2018 IPR001633 EAL domain AM393_RS00395 7ce64bb6b057a2429a4052f56c364e44 527 Pfam PF00563 EAL domain 272 501 5.9E-58 T 28-03-2018 IPR001633 EAL domain AM393_RS00395 7ce64bb6b057a2429a4052f56c364e44 527 Pfam PF12792 CSS motif domain associated with EAL 47 236 7.4E-28 T 28-03-2018 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain AM393_RS13240 effbf9dfa34b46af1499792331e3c77a 150 Gene3D G3DSA:2.60.120.370 1 150 3.9E-53 T 28-03-2018 IPR004375 YhcH/YjgK/YiaL family AM393_RS13240 effbf9dfa34b46af1499792331e3c77a 150 Pfam PF04074 Domain of unknown function (DUF386) 1 147 6.4E-45 T 28-03-2018 IPR004375 YhcH/YjgK/YiaL family AM393_RS13240 effbf9dfa34b46af1499792331e3c77a 150 TIGRFAM TIGR00022 TIGR00022: YhcH/YjgK/YiaL family protein 1 149 4.0E-58 T 28-03-2018 IPR004375 YhcH/YjgK/YiaL family AM393_RS13240 effbf9dfa34b46af1499792331e3c77a 150 SUPERFAMILY SSF51197 1 149 1.51E-41 T 28-03-2018 AM393_RS25630 b7ced428b33c035282a64e54d71a6880 278 SMART SM00849 55 257 1.5E-21 T 28-03-2018 IPR001279 Metallo-beta-lactamase AM393_RS25630 b7ced428b33c035282a64e54d71a6880 278 Gene3D G3DSA:3.60.15.10 2 278 1.7E-52 T 28-03-2018 IPR001279 Metallo-beta-lactamase AM393_RS25630 b7ced428b33c035282a64e54d71a6880 278 Pfam PF00753 Metallo-beta-lactamase superfamily 58 257 2.8E-26 T 28-03-2018 IPR001279 Metallo-beta-lactamase AM393_RS25630 b7ced428b33c035282a64e54d71a6880 278 SUPERFAMILY SSF56281 5 269 4.06E-45 T 28-03-2018 IPR001279 Metallo-beta-lactamase AM393_RS21460 2b7c73e0aa76c2b29a7aa28c46887b8f 287 SUPERFAMILY SSF82771 34 111 7.06E-10 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily AM393_RS21460 2b7c73e0aa76c2b29a7aa28c46887b8f 287 Gene3D G3DSA:3.40.1440.10 20 115 7.3E-17 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily AM393_RS21460 2b7c73e0aa76c2b29a7aa28c46887b8f 287 SMART SM00465 34 112 1.6E-14 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily AM393_RS08940 d1f4cf6357c392a323a0832530837879 736 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 437 451 8.7E-28 T 28-03-2018 AM393_RS08940 d1f4cf6357c392a323a0832530837879 736 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 629 648 8.7E-28 T 28-03-2018 AM393_RS08940 d1f4cf6357c392a323a0832530837879 736 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 286 300 8.7E-28 T 28-03-2018 AM393_RS08940 d1f4cf6357c392a323a0832530837879 736 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 578 588 8.7E-28 T 28-03-2018 AM393_RS08940 d1f4cf6357c392a323a0832530837879 736 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 556 567 8.7E-28 T 28-03-2018 AM393_RS08940 d1f4cf6357c392a323a0832530837879 736 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 652 664 8.7E-28 T 28-03-2018 AM393_RS08940 d1f4cf6357c392a323a0832530837879 736 Pfam PF00403 Heavy-metal-associated domain 54 111 9.0E-12 T 28-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AM393_RS08940 d1f4cf6357c392a323a0832530837879 736 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 186 733 3.0E-160 T 28-03-2018 AM393_RS08940 d1f4cf6357c392a323a0832530837879 736 SUPERFAMILY SSF55008 51 113 2.09E-15 T 28-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AM393_RS08940 d1f4cf6357c392a323a0832530837879 736 SUPERFAMILY SSF56784 436 455 4.42E-50 T 28-03-2018 IPR023214 HAD-like domain AM393_RS08940 d1f4cf6357c392a323a0832530837879 736 SUPERFAMILY SSF56784 528 729 4.42E-50 T 28-03-2018 IPR023214 HAD-like domain AM393_RS08940 d1f4cf6357c392a323a0832530837879 736 SUPERFAMILY SSF81653 239 336 7.32E-22 T 28-03-2018 IPR008250 P-type ATPase, A domain Reactome: R-HSA-936837 AM393_RS08940 d1f4cf6357c392a323a0832530837879 736 Gene3D G3DSA:3.40.50.1000 559 696 3.8E-35 T 28-03-2018 IPR023214 HAD-like domain AM393_RS08940 d1f4cf6357c392a323a0832530837879 736 Pfam PF00122 E1-E2 ATPase 237 417 3.0E-46 T 28-03-2018 AM393_RS08940 d1f4cf6357c392a323a0832530837879 736 SUPERFAMILY SSF81665 188 240 1.22E-17 T 28-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 AM393_RS08940 d1f4cf6357c392a323a0832530837879 736 SUPERFAMILY SSF81665 678 717 1.22E-17 T 28-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 AM393_RS08940 d1f4cf6357c392a323a0832530837879 736 SUPERFAMILY SSF81665 337 431 1.22E-17 T 28-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 AM393_RS08940 d1f4cf6357c392a323a0832530837879 736 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 186 731 7.2E-176 T 28-03-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 AM393_RS08940 d1f4cf6357c392a323a0832530837879 736 ProSitePatterns PS01047 Heavy-metal-associated domain. 55 84 - T 28-03-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 AM393_RS08940 d1f4cf6357c392a323a0832530837879 736 Gene3D G3DSA:3.30.70.100 47 118 3.0E-16 T 28-03-2018 AM393_RS08940 d1f4cf6357c392a323a0832530837879 736 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 439 445 - T 28-03-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 AM393_RS08940 d1f4cf6357c392a323a0832530837879 736 Gene3D G3DSA:1.20.1110.10 188 460 2.3E-28 T 28-03-2018 AM393_RS08940 d1f4cf6357c392a323a0832530837879 736 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 209 708 1.8E-78 T 28-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AM393_RS08940 d1f4cf6357c392a323a0832530837879 736 Gene3D G3DSA:3.40.1110.10 461 558 4.1E-28 T 28-03-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 AM393_RS08940 d1f4cf6357c392a323a0832530837879 736 Pfam PF00702 haloacid dehalogenase-like hydrolase 436 642 1.3E-37 T 28-03-2018 AM393_RS08405 c1d701ea53a34573b5004391a9e5abd4 195 Gene3D G3DSA:3.10.50.40 1 164 9.5E-30 T 28-03-2018 AM393_RS08405 c1d701ea53a34573b5004391a9e5abd4 195 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 5 136 2.1E-9 T 28-03-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AM393_RS08405 c1d701ea53a34573b5004391a9e5abd4 195 SUPERFAMILY SSF54534 2 140 1.96E-33 T 28-03-2018 AM393_RS21635 fbf1fd02ecfdd8da2604ae8642a408d9 531 Pfam PF02885 Glycosyl transferase family, helical bundle domain 202 262 2.7E-15 T 28-03-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 AM393_RS21635 fbf1fd02ecfdd8da2604ae8642a408d9 531 SUPERFAMILY SSF52317 3 191 4.03E-44 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AM393_RS21635 fbf1fd02ecfdd8da2604ae8642a408d9 531 SUPERFAMILY SSF47648 200 266 4.71E-16 T 28-03-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 AM393_RS21635 fbf1fd02ecfdd8da2604ae8642a408d9 531 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 4 186 1.2E-53 T 28-03-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AM393_RS21635 fbf1fd02ecfdd8da2604ae8642a408d9 531 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 79 95 2.1E-5 T 28-03-2018 AM393_RS21635 fbf1fd02ecfdd8da2604ae8642a408d9 531 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 49 63 2.1E-5 T 28-03-2018 AM393_RS21635 fbf1fd02ecfdd8da2604ae8642a408d9 531 PRINTS PR00097 Anthranilate synthase component II signature 124 136 1.1E-33 T 28-03-2018 AM393_RS21635 fbf1fd02ecfdd8da2604ae8642a408d9 531 PRINTS PR00097 Anthranilate synthase component II signature 4 18 1.1E-33 T 28-03-2018 AM393_RS21635 fbf1fd02ecfdd8da2604ae8642a408d9 531 PRINTS PR00097 Anthranilate synthase component II signature 79 90 1.1E-33 T 28-03-2018 AM393_RS21635 fbf1fd02ecfdd8da2604ae8642a408d9 531 PRINTS PR00097 Anthranilate synthase component II signature 104 112 1.1E-33 T 28-03-2018 AM393_RS21635 fbf1fd02ecfdd8da2604ae8642a408d9 531 PRINTS PR00097 Anthranilate synthase component II signature 166 179 1.1E-33 T 28-03-2018 AM393_RS21635 fbf1fd02ecfdd8da2604ae8642a408d9 531 PRINTS PR00097 Anthranilate synthase component II signature 52 61 1.1E-33 T 28-03-2018 AM393_RS21635 fbf1fd02ecfdd8da2604ae8642a408d9 531 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 204 528 4.0E-128 T 28-03-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 AM393_RS21635 fbf1fd02ecfdd8da2604ae8642a408d9 531 Gene3D G3DSA:3.40.50.880 1 192 2.7E-45 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AM393_RS21635 fbf1fd02ecfdd8da2604ae8642a408d9 531 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 202 530 38.477 T 28-03-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 AM393_RS21635 fbf1fd02ecfdd8da2604ae8642a408d9 531 Gene3D G3DSA:3.40.1030.10 277 530 1.5E-90 T 28-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AM393_RS21635 fbf1fd02ecfdd8da2604ae8642a408d9 531 Gene3D G3DSA:1.20.970.10 193 276 1.8E-16 T 28-03-2018 AM393_RS21635 fbf1fd02ecfdd8da2604ae8642a408d9 531 SUPERFAMILY SSF52418 269 527 1.83E-90 T 28-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AM393_RS21635 fbf1fd02ecfdd8da2604ae8642a408d9 531 PRINTS PR00096 Glutamine amidotransferase superfamily signature 52 61 4.5E-13 T 28-03-2018 AM393_RS21635 fbf1fd02ecfdd8da2604ae8642a408d9 531 PRINTS PR00096 Glutamine amidotransferase superfamily signature 166 179 4.5E-13 T 28-03-2018 AM393_RS21635 fbf1fd02ecfdd8da2604ae8642a408d9 531 PRINTS PR00096 Glutamine amidotransferase superfamily signature 79 90 4.5E-13 T 28-03-2018 AM393_RS21635 fbf1fd02ecfdd8da2604ae8642a408d9 531 Pfam PF00117 Glutamine amidotransferase class-I 6 186 8.1E-44 T 28-03-2018 IPR017926 Glutamine amidotransferase AM393_RS21635 fbf1fd02ecfdd8da2604ae8642a408d9 531 Pfam PF00591 Glycosyl transferase family, a/b domain 273 521 1.1E-100 T 28-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AM393_RS25835 ca136de6447b79a8a0a039b6b764729c 218 Pfam PF01144 Coenzyme A transferase 5 200 3.7E-40 T 28-03-2018 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 Reactome: R-HSA-77108 AM393_RS25835 ca136de6447b79a8a0a039b6b764729c 218 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 3 207 1.5E-98 T 28-03-2018 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 Reactome: R-HSA-77108 AM393_RS25835 ca136de6447b79a8a0a039b6b764729c 218 SMART SM00882 5 201 3.6E-71 T 28-03-2018 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 Reactome: R-HSA-77108 AM393_RS25835 ca136de6447b79a8a0a039b6b764729c 218 Gene3D G3DSA:3.40.1080.10 2 213 4.1E-67 T 28-03-2018 AM393_RS25835 ca136de6447b79a8a0a039b6b764729c 218 ProSitePatterns PS01274 Coenzyme A transferases signature 2. 43 51 - T 28-03-2018 IPR004164 Coenzyme A transferase active site GO:0008152|GO:0008410 Reactome: R-HSA-77108 AM393_RS25835 ca136de6447b79a8a0a039b6b764729c 218 SUPERFAMILY SSF100950 3 216 3.49E-75 T 28-03-2018 AM393_RS24000 a8618a06242a8260def0c9dc774dbb09 467 Gene3D G3DSA:3.30.420.10 131 308 1.7E-18 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM393_RS24000 a8618a06242a8260def0c9dc774dbb09 467 Gene3D G3DSA:1.10.10.10 9 70 4.4E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS24000 a8618a06242a8260def0c9dc774dbb09 467 SUPERFAMILY SSF46689 12 121 2.15E-13 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS24000 a8618a06242a8260def0c9dc774dbb09 467 SUPERFAMILY SSF53098 137 296 4.17E-14 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM393_RS24000 a8618a06242a8260def0c9dc774dbb09 467 Pfam PF13518 Helix-turn-helix domain 16 63 6.5E-9 T 28-03-2018 AM393_RS27640 a8618a06242a8260def0c9dc774dbb09 467 Gene3D G3DSA:3.30.420.10 131 308 1.7E-18 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM393_RS27640 a8618a06242a8260def0c9dc774dbb09 467 Gene3D G3DSA:1.10.10.10 9 70 4.4E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS27640 a8618a06242a8260def0c9dc774dbb09 467 SUPERFAMILY SSF46689 12 121 2.15E-13 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS27640 a8618a06242a8260def0c9dc774dbb09 467 SUPERFAMILY SSF53098 137 296 4.17E-14 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM393_RS27640 a8618a06242a8260def0c9dc774dbb09 467 Pfam PF13518 Helix-turn-helix domain 16 63 6.5E-9 T 28-03-2018 AM393_RS22125 a8618a06242a8260def0c9dc774dbb09 467 Gene3D G3DSA:3.30.420.10 131 308 1.7E-18 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM393_RS22125 a8618a06242a8260def0c9dc774dbb09 467 Gene3D G3DSA:1.10.10.10 9 70 4.4E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS22125 a8618a06242a8260def0c9dc774dbb09 467 SUPERFAMILY SSF46689 12 121 2.15E-13 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS22125 a8618a06242a8260def0c9dc774dbb09 467 SUPERFAMILY SSF53098 137 296 4.17E-14 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM393_RS22125 a8618a06242a8260def0c9dc774dbb09 467 Pfam PF13518 Helix-turn-helix domain 16 63 6.5E-9 T 28-03-2018 AM393_RS26335 0e1f9fd0aae90fc4eff6e646f83b455d 1030 Gene3D G3DSA:1.20.1640.10 800 1026 6.2E-35 T 28-03-2018 AM393_RS26335 0e1f9fd0aae90fc4eff6e646f83b455d 1030 Gene3D G3DSA:1.20.1640.10 300 505 8.0E-30 T 28-03-2018 AM393_RS26335 0e1f9fd0aae90fc4eff6e646f83b455d 1030 PRINTS PR00702 Acriflavin resistance protein family signature 43 61 7.2E-17 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS26335 0e1f9fd0aae90fc4eff6e646f83b455d 1030 PRINTS PR00702 Acriflavin resistance protein family signature 442 465 7.2E-17 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS26335 0e1f9fd0aae90fc4eff6e646f83b455d 1030 PRINTS PR00702 Acriflavin resistance protein family signature 389 413 7.2E-17 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS26335 0e1f9fd0aae90fc4eff6e646f83b455d 1030 PRINTS PR00702 Acriflavin resistance protein family signature 361 382 7.2E-17 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS26335 0e1f9fd0aae90fc4eff6e646f83b455d 1030 PRINTS PR00702 Acriflavin resistance protein family signature 467 490 7.2E-17 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS26335 0e1f9fd0aae90fc4eff6e646f83b455d 1030 Gene3D G3DSA:3.30.2090.10 709 796 3.0E-13 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM393_RS26335 0e1f9fd0aae90fc4eff6e646f83b455d 1030 Gene3D G3DSA:3.30.2090.10 186 272 1.1E-14 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM393_RS26335 0e1f9fd0aae90fc4eff6e646f83b455d 1030 SUPERFAMILY SSF82866 795 1017 7.06E-42 T 28-03-2018 AM393_RS26335 0e1f9fd0aae90fc4eff6e646f83b455d 1030 Gene3D G3DSA:3.30.70.1430 558 660 1.6E-14 T 28-03-2018 AM393_RS26335 0e1f9fd0aae90fc4eff6e646f83b455d 1030 SUPERFAMILY SSF82714 710 795 4.84E-14 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM393_RS26335 0e1f9fd0aae90fc4eff6e646f83b455d 1030 SUPERFAMILY SSF82693 45 140 1.83E-17 T 28-03-2018 AM393_RS26335 0e1f9fd0aae90fc4eff6e646f83b455d 1030 SUPERFAMILY SSF82866 302 494 6.15E-33 T 28-03-2018 AM393_RS26335 0e1f9fd0aae90fc4eff6e646f83b455d 1030 Gene3D G3DSA:3.30.70.1430 45 149 1.2E-27 T 28-03-2018 AM393_RS26335 0e1f9fd0aae90fc4eff6e646f83b455d 1030 SUPERFAMILY SSF82693 273 329 6.02E-15 T 28-03-2018 AM393_RS26335 0e1f9fd0aae90fc4eff6e646f83b455d 1030 SUPERFAMILY SSF82693 144 187 6.02E-15 T 28-03-2018 AM393_RS26335 0e1f9fd0aae90fc4eff6e646f83b455d 1030 SUPERFAMILY SSF82693 557 606 9.59E-6 T 28-03-2018 AM393_RS26335 0e1f9fd0aae90fc4eff6e646f83b455d 1030 Pfam PF00873 AcrB/AcrD/AcrF family 9 1011 1.4E-148 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS26335 0e1f9fd0aae90fc4eff6e646f83b455d 1030 SUPERFAMILY SSF82714 191 271 2.75E-12 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM393_RS08995 76a8b41e3400f5a2c372cedfa9bc3fc1 327 Pfam PF00535 Glycosyl transferase family 2 11 171 1.5E-32 T 28-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AM393_RS08995 76a8b41e3400f5a2c372cedfa9bc3fc1 327 Gene3D G3DSA:3.90.550.10 2 231 5.7E-31 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM393_RS08995 76a8b41e3400f5a2c372cedfa9bc3fc1 327 Hamap MF_01164 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [arnC]. 2 327 62.443 T 28-03-2018 IPR022857 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase GO:0016780 KEGG: 00520+2.4.2.53 AM393_RS08995 76a8b41e3400f5a2c372cedfa9bc3fc1 327 SUPERFAMILY SSF53448 7 234 6.1E-38 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM393_RS05815 0b99f55a45072ceda5adef4ca052780a 462 Gene3D G3DSA:1.20.1250.20 266 460 1.6E-25 T 28-03-2018 AM393_RS05815 0b99f55a45072ceda5adef4ca052780a 462 Gene3D G3DSA:1.20.1250.20 16 203 6.1E-25 T 28-03-2018 AM393_RS05815 0b99f55a45072ceda5adef4ca052780a 462 SUPERFAMILY SSF103473 12 202 1.31E-55 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS05815 0b99f55a45072ceda5adef4ca052780a 462 SUPERFAMILY SSF103473 254 454 1.31E-55 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS05815 0b99f55a45072ceda5adef4ca052780a 462 Pfam PF07690 Major Facilitator Superfamily 27 416 4.6E-38 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS05815 0b99f55a45072ceda5adef4ca052780a 462 PRINTS PR01036 Tetracycline resistance protein TetB signature 24 48 5.9E-9 T 28-03-2018 AM393_RS05815 0b99f55a45072ceda5adef4ca052780a 462 PRINTS PR01036 Tetracycline resistance protein TetB signature 115 135 5.9E-9 T 28-03-2018 AM393_RS05815 0b99f55a45072ceda5adef4ca052780a 462 PRINTS PR01036 Tetracycline resistance protein TetB signature 145 169 5.9E-9 T 28-03-2018 AM393_RS05815 0b99f55a45072ceda5adef4ca052780a 462 PRINTS PR01036 Tetracycline resistance protein TetB signature 308 332 5.9E-9 T 28-03-2018 AM393_RS03565 7495df910cc05a35caa70c4bb4828a02 1649 Gene3D G3DSA:2.60.40.10 383 477 3.8E-7 T 28-03-2018 IPR013783 Immunoglobulin-like fold AM393_RS03565 7495df910cc05a35caa70c4bb4828a02 1649 Gene3D G3DSA:2.60.40.10 1016 1118 1.8E-4 T 28-03-2018 IPR013783 Immunoglobulin-like fold AM393_RS03565 7495df910cc05a35caa70c4bb4828a02 1649 Gene3D G3DSA:2.60.40.10 754 815 0.74 T 28-03-2018 IPR013783 Immunoglobulin-like fold AM393_RS03565 7495df910cc05a35caa70c4bb4828a02 1649 Pfam PF01835 MG2 domain 385 476 2.1E-20 T 28-03-2018 IPR002890 Alpha-2-macroglobulin, N-terminal GO:0004866 AM393_RS03565 7495df910cc05a35caa70c4bb4828a02 1649 SMART SM01360 965 1054 1.2E-20 T 28-03-2018 IPR001599 Alpha-2-macroglobulin GO:0004866 AM393_RS03565 7495df910cc05a35caa70c4bb4828a02 1649 Pfam PF07703 Alpha-2-macroglobulin family N-terminal region 756 903 1.7E-14 T 28-03-2018 IPR011625 Alpha-2-macroglobulin, N-terminal 2 AM393_RS03565 7495df910cc05a35caa70c4bb4828a02 1649 Gene3D G3DSA:2.60.40.10 858 1014 0.25 T 28-03-2018 IPR013783 Immunoglobulin-like fold AM393_RS03565 7495df910cc05a35caa70c4bb4828a02 1649 Gene3D G3DSA:3.40.190.10 1 196 0.003 T 28-03-2018 AM393_RS03565 7495df910cc05a35caa70c4bb4828a02 1649 Gene3D G3DSA:1.50.10.20 1164 1430 8.1E-28 T 28-03-2018 AM393_RS03565 7495df910cc05a35caa70c4bb4828a02 1649 Pfam PF11974 Alpha-2-macroglobulin MG1 domain 286 378 3.5E-20 T 28-03-2018 AM393_RS03565 7495df910cc05a35caa70c4bb4828a02 1649 SUPERFAMILY SSF48239 1174 1430 1.66E-42 T 28-03-2018 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid AM393_RS03565 7495df910cc05a35caa70c4bb4828a02 1649 PIRSF PIRSF038980 1 1649 0.0 T 28-03-2018 IPR026284 Alpha-2-macroglobulin domain protein, bacteria AM393_RS03565 7495df910cc05a35caa70c4bb4828a02 1649 Pfam PF00207 Alpha-2-macroglobulin family 973 1054 6.1E-8 T 28-03-2018 IPR001599 Alpha-2-macroglobulin GO:0004866 AM393_RS03565 7495df910cc05a35caa70c4bb4828a02 1649 SMART SM01359 755 903 7.3E-35 T 28-03-2018 IPR011625 Alpha-2-macroglobulin, N-terminal 2 AM393_RS06940 4d23a43ab83eae28f0647d03296861b5 581 Gene3D G3DSA:3.90.580.10 1 102 5.8E-35 T 28-03-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 AM393_RS06940 4d23a43ab83eae28f0647d03296861b5 581 Pfam PF13155 Toprim-like 263 348 6.7E-14 T 28-03-2018 AM393_RS06940 4d23a43ab83eae28f0647d03296861b5 581 Gene3D G3DSA:3.40.1360.10 241 367 3.0E-31 T 28-03-2018 AM393_RS06940 4d23a43ab83eae28f0647d03296861b5 581 SMART SM00400 36 90 7.6E-38 T 28-03-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 AM393_RS06940 4d23a43ab83eae28f0647d03296861b5 581 SMART SM00766 450 575 1.0E-47 T 28-03-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 AM393_RS06940 4d23a43ab83eae28f0647d03296861b5 581 Gene3D G3DSA:1.20.50.20 368 417 4.1E-21 T 28-03-2018 AM393_RS06940 4d23a43ab83eae28f0647d03296861b5 581 SUPERFAMILY SSF56731 116 428 8.55E-114 T 28-03-2018 AM393_RS06940 4d23a43ab83eae28f0647d03296861b5 581 SMART SM00493 259 330 1.4E-19 T 28-03-2018 IPR006171 TOPRIM domain AM393_RS06940 4d23a43ab83eae28f0647d03296861b5 581 SUPERFAMILY SSF57783 4 100 7.14E-36 T 28-03-2018 AM393_RS06940 4d23a43ab83eae28f0647d03296861b5 581 Pfam PF08278 DNA primase DnaG DnaB-binding 451 573 1.8E-32 T 28-03-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 AM393_RS06940 4d23a43ab83eae28f0647d03296861b5 581 PIRSF PIRSF002811 2 580 1.8E-145 T 28-03-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 AM393_RS06940 4d23a43ab83eae28f0647d03296861b5 581 Pfam PF08275 DNA primase catalytic core, N-terminal domain 126 251 7.2E-43 T 28-03-2018 IPR013264 DNA primase, catalytic core, N-terminal AM393_RS06940 4d23a43ab83eae28f0647d03296861b5 581 Pfam PF10410 DnaB-helicase binding domain of primase 370 424 3.6E-12 T 28-03-2018 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 AM393_RS06940 4d23a43ab83eae28f0647d03296861b5 581 Gene3D G3DSA:3.90.980.10 109 240 1.9E-45 T 28-03-2018 IPR013264 DNA primase, catalytic core, N-terminal AM393_RS06940 4d23a43ab83eae28f0647d03296861b5 581 Hamap MF_00974 DNA primase [dnaG]. 4 576 30.199 T 28-03-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 AM393_RS06940 4d23a43ab83eae28f0647d03296861b5 581 TIGRFAM TIGR01391 dnaG: DNA primase 5 419 8.1E-150 T 28-03-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 AM393_RS06940 4d23a43ab83eae28f0647d03296861b5 581 SUPERFAMILY SSF117023 447 578 7.32E-43 T 28-03-2018 AM393_RS06940 4d23a43ab83eae28f0647d03296861b5 581 Gene3D G3DSA:1.10.860.10 434 581 2.9E-38 T 28-03-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal AM393_RS06940 4d23a43ab83eae28f0647d03296861b5 581 Pfam PF01807 CHC2 zinc finger 7 100 6.5E-41 T 28-03-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 AM393_RS06120 1f884d31f763cfdfd3868b5b9bacb7bf 306 Gene3D G3DSA:3.40.800.10 4 306 7.0E-93 T 28-03-2018 AM393_RS06120 1f884d31f763cfdfd3868b5b9bacb7bf 306 SUPERFAMILY SSF52768 13 301 1.39E-91 T 28-03-2018 AM393_RS06120 1f884d31f763cfdfd3868b5b9bacb7bf 306 Pfam PF00491 Arginase family 34 297 7.6E-86 T 28-03-2018 IPR006035 Ureohydrolase GO:0046872 AM393_RS06120 1f884d31f763cfdfd3868b5b9bacb7bf 306 TIGRFAM TIGR01230 agmatinase: agmatinase 22 299 9.4E-117 T 28-03-2018 IPR005925 Agmatinase-related KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305|Reactome: R-HSA-351143 AM393_RS06120 1f884d31f763cfdfd3868b5b9bacb7bf 306 ProSitePatterns PS01053 Arginase family signature. 228 249 - T 28-03-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 AM393_RS06120 1f884d31f763cfdfd3868b5b9bacb7bf 306 Hamap MF_01418 Agmatinase [speB]. 1 304 70.134 T 28-03-2018 IPR023694 Agmatinase GO:0008783|GO:0009446|GO:0030145 KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305 AM393_RS06120 1f884d31f763cfdfd3868b5b9bacb7bf 306 PIRSF PIRSF036979 13 304 1.3E-100 T 28-03-2018 IPR006035 Ureohydrolase GO:0046872 AM393_RS10165 d58d5fe29212b4344723f23e39605986 119 Pfam PF06296 RelE toxin of RelE / RelB toxin-antitoxin system 1 113 2.5E-40 T 28-03-2018 IPR009387 Toxin HigB-2 AM393_RS10165 d58d5fe29212b4344723f23e39605986 119 PIRSF PIRSF018634 1 117 9.1E-45 T 28-03-2018 IPR009387 Toxin HigB-2 AM393_RS07780 520a2c1404b524f38f573351016bd892 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 4 142 5.6E-68 T 28-03-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS07780 520a2c1404b524f38f573351016bd892 142 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 28-03-2018 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 AM393_RS07780 520a2c1404b524f38f573351016bd892 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 28.709 T 28-03-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 AM393_RS07780 520a2c1404b524f38f573351016bd892 142 PIRSF PIRSF002181 1 142 1.0E-51 T 28-03-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 AM393_RS07780 520a2c1404b524f38f573351016bd892 142 SUPERFAMILY SSF52161 1 140 1.15E-60 T 28-03-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 AM393_RS07780 520a2c1404b524f38f573351016bd892 142 Pfam PF00572 Ribosomal protein L13 15 138 3.0E-57 T 28-03-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 AM393_RS07780 520a2c1404b524f38f573351016bd892 142 Gene3D G3DSA:3.90.1180.10 1 142 6.4E-63 T 28-03-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 AM393_RS03115 5685a7a544931f50ac6107cc806247b8 253 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 15 231 2.2E-41 T 28-03-2018 AM393_RS03115 5685a7a544931f50ac6107cc806247b8 253 Hamap MF_00468 Sulfate transporter CysZ [cysZ]. 9 249 28.727 T 28-03-2018 IPR022985 Sulfate transporter CysZ GO:0000103|GO:0005887|GO:0015116 AM393_RS10675 40a6f28acc34073e8bdfe4bdd804257b 930 SMART SM00475 7 268 1.4E-141 T 28-03-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 AM393_RS10675 40a6f28acc34073e8bdfe4bdd804257b 930 Pfam PF00476 DNA polymerase family A 554 927 4.4E-160 T 28-03-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM393_RS10675 40a6f28acc34073e8bdfe4bdd804257b 930 SUPERFAMILY SSF56672 525 930 8.89E-163 T 28-03-2018 AM393_RS10675 40a6f28acc34073e8bdfe4bdd804257b 930 SMART SM00474 332 519 4.0E-45 T 28-03-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 AM393_RS10675 40a6f28acc34073e8bdfe4bdd804257b 930 SMART SM00482 688 894 4.6E-127 T 28-03-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM393_RS10675 40a6f28acc34073e8bdfe4bdd804257b 930 Pfam PF01612 3'-5' exonuclease 332 519 2.2E-42 T 28-03-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 AM393_RS10675 40a6f28acc34073e8bdfe4bdd804257b 930 SUPERFAMILY SSF88723 7 170 1.13E-57 T 28-03-2018 IPR029060 PIN domain-like AM393_RS10675 40a6f28acc34073e8bdfe4bdd804257b 930 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 171 271 1.3E-30 T 28-03-2018 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 AM393_RS10675 40a6f28acc34073e8bdfe4bdd804257b 930 Gene3D G3DSA:3.40.50.1010 7 184 8.3E-68 T 28-03-2018 IPR029060 PIN domain-like AM393_RS10675 40a6f28acc34073e8bdfe4bdd804257b 930 Gene3D G3DSA:3.30.70.370 756 930 2.7E-53 T 28-03-2018 AM393_RS10675 40a6f28acc34073e8bdfe4bdd804257b 930 Gene3D G3DSA:3.30.70.370 659 754 4.4E-18 T 28-03-2018 AM393_RS10675 40a6f28acc34073e8bdfe4bdd804257b 930 SUPERFAMILY SSF53098 329 520 4.45E-54 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM393_RS10675 40a6f28acc34073e8bdfe4bdd804257b 930 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 9 170 2.9E-54 T 28-03-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 AM393_RS10675 40a6f28acc34073e8bdfe4bdd804257b 930 Gene3D G3DSA:1.10.150.20 185 269 1.3E-24 T 28-03-2018 AM393_RS10675 40a6f28acc34073e8bdfe4bdd804257b 930 Gene3D G3DSA:1.20.1060.10 545 658 9.3E-33 T 28-03-2018 AM393_RS10675 40a6f28acc34073e8bdfe4bdd804257b 930 TIGRFAM TIGR00593 pola: DNA polymerase I 9 930 6.8E-288 T 28-03-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM393_RS10675 40a6f28acc34073e8bdfe4bdd804257b 930 ProSitePatterns PS00447 DNA polymerase family A signature. 756 775 - T 28-03-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM393_RS10675 40a6f28acc34073e8bdfe4bdd804257b 930 SUPERFAMILY SSF47807 171 291 8.22E-30 T 28-03-2018 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 AM393_RS10675 40a6f28acc34073e8bdfe4bdd804257b 930 PRINTS PR00868 DNA-polymerase family A (pol I) signature 702 725 1.6E-80 T 28-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM393_RS10675 40a6f28acc34073e8bdfe4bdd804257b 930 PRINTS PR00868 DNA-polymerase family A (pol I) signature 756 781 1.6E-80 T 28-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM393_RS10675 40a6f28acc34073e8bdfe4bdd804257b 930 PRINTS PR00868 DNA-polymerase family A (pol I) signature 732 745 1.6E-80 T 28-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM393_RS10675 40a6f28acc34073e8bdfe4bdd804257b 930 PRINTS PR00868 DNA-polymerase family A (pol I) signature 793 804 1.6E-80 T 28-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM393_RS10675 40a6f28acc34073e8bdfe4bdd804257b 930 PRINTS PR00868 DNA-polymerase family A (pol I) signature 877 890 1.6E-80 T 28-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM393_RS10675 40a6f28acc34073e8bdfe4bdd804257b 930 PRINTS PR00868 DNA-polymerase family A (pol I) signature 657 679 1.6E-80 T 28-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM393_RS10675 40a6f28acc34073e8bdfe4bdd804257b 930 PRINTS PR00868 DNA-polymerase family A (pol I) signature 815 826 1.6E-80 T 28-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM393_RS10675 40a6f28acc34073e8bdfe4bdd804257b 930 PRINTS PR00868 DNA-polymerase family A (pol I) signature 847 863 1.6E-80 T 28-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM393_RS10675 40a6f28acc34073e8bdfe4bdd804257b 930 PRINTS PR00868 DNA-polymerase family A (pol I) signature 680 695 1.6E-80 T 28-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM393_RS10675 40a6f28acc34073e8bdfe4bdd804257b 930 Gene3D G3DSA:3.30.420.10 323 544 1.0E-48 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM393_RS10675 40a6f28acc34073e8bdfe4bdd804257b 930 SMART SM00279 173 208 1.2E-13 T 28-03-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 AM393_RS04900 5cada2cbcfe67fd5c6b6a2f234a2641c 545 Hamap MF_01227 CTP synthase [pyrG]. 3 540 51.517 T 28-03-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 AM393_RS04900 5cada2cbcfe67fd5c6b6a2f234a2641c 545 Pfam PF06418 CTP synthase N-terminus 5 266 7.1E-126 T 28-03-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 AM393_RS04900 5cada2cbcfe67fd5c6b6a2f234a2641c 545 Gene3D G3DSA:3.40.50.300 1 285 7.0E-129 T 28-03-2018 AM393_RS04900 5cada2cbcfe67fd5c6b6a2f234a2641c 545 SUPERFAMILY SSF52317 289 542 5.42E-89 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AM393_RS04900 5cada2cbcfe67fd5c6b6a2f234a2641c 545 Pfam PF00117 Glutamine amidotransferase class-I 301 535 1.2E-65 T 28-03-2018 IPR017926 Glutamine amidotransferase AM393_RS04900 5cada2cbcfe67fd5c6b6a2f234a2641c 545 TIGRFAM TIGR00337 PyrG: CTP synthase 2 535 5.0E-267 T 28-03-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 AM393_RS04900 5cada2cbcfe67fd5c6b6a2f234a2641c 545 SUPERFAMILY SSF52540 3 269 3.1E-122 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS04900 5cada2cbcfe67fd5c6b6a2f234a2641c 545 Gene3D G3DSA:3.40.50.880 286 543 1.3E-77 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AM393_RS19965 f46aa9748955b12d8e0ff2488c6a0260 230 Pfam PF04239 Protein of unknown function (DUF421) 104 168 1.5E-15 T 28-03-2018 IPR007353 Protein of unknown function DUF421 AM393_RS19965 f46aa9748955b12d8e0ff2488c6a0260 230 Gene3D G3DSA:3.30.240.20 97 166 1.6E-18 T 28-03-2018 IPR023090 Uncharacterised domain UPF0702, alpha/beta domain AM393_RS03365 9f82f44735b012ae032c4f00643fe46b 667 SUPERFAMILY SSF55729 369 416 2.93E-12 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM393_RS03365 9f82f44735b012ae032c4f00643fe46b 667 SUPERFAMILY SSF55729 452 511 2.93E-12 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM393_RS03365 9f82f44735b012ae032c4f00643fe46b 667 Gene3D G3DSA:3.40.630.30 348 521 1.3E-16 T 28-03-2018 AM393_RS03365 9f82f44735b012ae032c4f00643fe46b 667 Pfam PF08351 Domain of unknown function (DUF1726) 64 144 1.8E-4 T 28-03-2018 IPR013562 tRNA(Met) cytidine acetyltransferase TmcA, N-terminal Reactome: R-HSA-6790901 AM393_RS03365 9f82f44735b012ae032c4f00643fe46b 667 Pfam PF13718 GNAT acetyltransferase 2 367 479 1.7E-15 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AM393_RS03365 9f82f44735b012ae032c4f00643fe46b 667 Pfam PF13718 GNAT acetyltransferase 2 484 531 1.2E-7 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AM393_RS03365 9f82f44735b012ae032c4f00643fe46b 667 Gene3D G3DSA:3.40.50.300 172 287 3.7E-6 T 28-03-2018 AM393_RS03365 9f82f44735b012ae032c4f00643fe46b 667 Hamap MF_01886 tRNA(Met) cytidine acetyltransferase TmcA [tmcA]. 16 649 47.711 T 28-03-2018 IPR024914 tRNA(Met) cytidine acetyltransferase TmcA GO:0000049|GO:0002101|GO:0051391|GO:0051392 KEGG: 00650+2.3.1.19 AM393_RS03365 9f82f44735b012ae032c4f00643fe46b 667 SUPERFAMILY SSF52540 171 281 3.51E-11 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS03365 9f82f44735b012ae032c4f00643fe46b 667 Pfam PF05127 Helicase 195 335 7.4E-41 T 28-03-2018 IPR007807 Helicase domain Reactome: R-HSA-6790901 AM393_RS03365 9f82f44735b012ae032c4f00643fe46b 667 Pfam PF17176 tRNA-binding domain 535 651 9.7E-37 T 28-03-2018 IPR033442 tRNA(Met) cytidine acetyltransferase TmcA, tRNA-binding domain KEGG: 00650+2.3.1.19 AM393_RS29005 5204afaa252b7d9f88291a91da04c2e3 151 TIGRFAM TIGR02051 MerR: Hg(II)-responsive transcriptional regulator 9 132 9.3E-56 T 28-03-2018 IPR011794 Hg(II)-responsive transcriptional regulator GO:0003677|GO:0006355|GO:0045340|GO:0046689 AM393_RS29005 5204afaa252b7d9f88291a91da04c2e3 151 Pfam PF00376 MerR family regulatory protein 9 46 1.1E-11 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM393_RS29005 5204afaa252b7d9f88291a91da04c2e3 151 SMART SM00422 8 77 1.7E-30 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM393_RS29005 5204afaa252b7d9f88291a91da04c2e3 151 Gene3D G3DSA:1.10.1660.10 4 63 1.8E-21 T 28-03-2018 AM393_RS29005 5204afaa252b7d9f88291a91da04c2e3 151 Gene3D G3DSA:1.10.1660.10 64 142 1.8E-20 T 28-03-2018 AM393_RS29005 5204afaa252b7d9f88291a91da04c2e3 151 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 44 64 3.9E-26 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM393_RS29005 5204afaa252b7d9f88291a91da04c2e3 151 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 9 20 3.9E-26 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM393_RS29005 5204afaa252b7d9f88291a91da04c2e3 151 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 20 33 3.9E-26 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM393_RS29005 5204afaa252b7d9f88291a91da04c2e3 151 Pfam PF09278 MerR, DNA binding 51 113 4.3E-18 T 28-03-2018 IPR015358 Transcription regulator MerR, DNA binding AM393_RS29005 5204afaa252b7d9f88291a91da04c2e3 151 ProSitePatterns PS00552 MerR-type HTH domain signature. 11 33 - T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM393_RS29005 5204afaa252b7d9f88291a91da04c2e3 151 SUPERFAMILY SSF46955 8 129 1.5E-29 T 28-03-2018 IPR009061 Putative DNA-binding domain AM393_RS18390 5469865375cdf7675e7cbd9695870ca9 303 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 43 272 2.9E-46 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM393_RS18390 5469865375cdf7675e7cbd9695870ca9 303 SMART SM00062 42 274 4.2E-67 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM393_RS18390 5469865375cdf7675e7cbd9695870ca9 303 Gene3D G3DSA:3.40.190.10 2 170 2.2E-31 T 28-03-2018 AM393_RS18390 5469865375cdf7675e7cbd9695870ca9 303 Gene3D G3DSA:3.40.190.10 171 303 3.6E-18 T 28-03-2018 AM393_RS18390 5469865375cdf7675e7cbd9695870ca9 303 SUPERFAMILY SSF53850 5 275 1.63E-63 T 28-03-2018 AM393_RS14220 863f59854cc364a023c011dc88304312 440 SUPERFAMILY SSF54680 337 439 2.35E-32 T 28-03-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AM393_RS14220 863f59854cc364a023c011dc88304312 440 Pfam PF00591 Glycosyl transferase family, a/b domain 79 309 2.4E-53 T 28-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AM393_RS14220 863f59854cc364a023c011dc88304312 440 SMART SM00941 350 424 2.3E-29 T 28-03-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AM393_RS14220 863f59854cc364a023c011dc88304312 440 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 113 128 - T 28-03-2018 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AM393_RS14220 863f59854cc364a023c011dc88304312 440 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 350 423 4.8E-25 T 28-03-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AM393_RS14220 863f59854cc364a023c011dc88304312 440 Gene3D G3DSA:3.90.1170.30 343 429 1.5E-29 T 28-03-2018 AM393_RS14220 863f59854cc364a023c011dc88304312 440 Hamap MF_01628 Thymidine phosphorylase [deoA]. 2 438 47.25 T 28-03-2018 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181 AM393_RS14220 863f59854cc364a023c011dc88304312 440 Gene3D G3DSA:3.40.1030.10 69 342 1.4E-82 T 28-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AM393_RS14220 863f59854cc364a023c011dc88304312 440 Gene3D G3DSA:1.20.970.10 3 67 1.0E-20 T 28-03-2018 AM393_RS14220 863f59854cc364a023c011dc88304312 440 SUPERFAMILY SSF47648 3 70 3.66E-21 T 28-03-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 AM393_RS14220 863f59854cc364a023c011dc88304312 440 Pfam PF02885 Glycosyl transferase family, helical bundle domain 6 67 1.4E-18 T 28-03-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 AM393_RS14220 863f59854cc364a023c011dc88304312 440 TIGRFAM TIGR02644 Y_phosphoryl: pyrimidine-nucleoside phosphorylase 5 423 4.7E-169 T 28-03-2018 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic GO:0006213|GO:0016154 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|Reactome: R-HSA-73614|Reactome: R-HSA-73621 AM393_RS14220 863f59854cc364a023c011dc88304312 440 PIRSF PIRSF000478 1 439 1.3E-152 T 28-03-2018 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AM393_RS14220 863f59854cc364a023c011dc88304312 440 TIGRFAM TIGR02643 T_phosphoryl: thymidine phosphorylase 2 438 1.3E-236 T 28-03-2018 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181 AM393_RS14220 863f59854cc364a023c011dc88304312 440 SUPERFAMILY SSF52418 74 334 2.09E-88 T 28-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AM393_RS10010 6f4afeaae4e04c5f1e7c4e8ade1163f8 138 Pfam PF00583 Acetyltransferase (GNAT) family 46 115 6.4E-12 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AM393_RS10010 6f4afeaae4e04c5f1e7c4e8ade1163f8 138 SUPERFAMILY SSF55729 7 134 4.15E-23 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM393_RS10010 6f4afeaae4e04c5f1e7c4e8ade1163f8 138 Gene3D G3DSA:3.40.630.30 14 138 1.2E-18 T 28-03-2018 AM393_RS08200 4db4e244ba50bb188b209700dbad63f2 329 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 60 156 1.8E-23 T 28-03-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM393_RS08200 4db4e244ba50bb188b209700dbad63f2 329 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 24 316 9.4E-113 T 28-03-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM393_RS08200 4db4e244ba50bb188b209700dbad63f2 329 SUPERFAMILY SSF47789 251 325 1.27E-25 T 28-03-2018 AM393_RS08200 4db4e244ba50bb188b209700dbad63f2 329 SMART SM00662 23 234 2.5E-105 T 28-03-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM393_RS08200 4db4e244ba50bb188b209700dbad63f2 329 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 245 308 7.5E-24 T 28-03-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM393_RS08200 4db4e244ba50bb188b209700dbad63f2 329 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 256 329 2.0E-36 T 28-03-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM393_RS08200 4db4e244ba50bb188b209700dbad63f2 329 SUPERFAMILY SSF55257 179 231 1.57E-30 T 28-03-2018 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM393_RS08200 4db4e244ba50bb188b209700dbad63f2 329 SUPERFAMILY SSF55257 6 53 1.57E-30 T 28-03-2018 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM393_RS08200 4db4e244ba50bb188b209700dbad63f2 329 Gene3D G3DSA:3.30.1360.10 4 90 3.1E-19 T 28-03-2018 AM393_RS08200 4db4e244ba50bb188b209700dbad63f2 329 Gene3D G3DSA:3.30.1360.10 119 231 5.9E-28 T 28-03-2018 AM393_RS08200 4db4e244ba50bb188b209700dbad63f2 329 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 29 228 3.9E-24 T 28-03-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM393_RS08200 4db4e244ba50bb188b209700dbad63f2 329 Gene3D G3DSA:1.10.150.20 245 328 7.6E-29 T 28-03-2018 AM393_RS08200 4db4e244ba50bb188b209700dbad63f2 329 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 5 317 34.587 T 28-03-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM393_RS08200 4db4e244ba50bb188b209700dbad63f2 329 SUPERFAMILY SSF56553 53 178 3.31E-41 T 28-03-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM393_RS28410 c6fd14fc89e6c7cf277ce79447be3049 423 SUPERFAMILY SSF56672 1 237 1.33E-60 T 28-03-2018 AM393_RS28410 c6fd14fc89e6c7cf277ce79447be3049 423 Pfam PF11799 impB/mucB/samB family C-terminal domain 239 354 6.1E-19 T 28-03-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AM393_RS28410 c6fd14fc89e6c7cf277ce79447be3049 423 Gene3D G3DSA:3.30.70.270 37 113 2.5E-15 T 28-03-2018 AM393_RS28410 c6fd14fc89e6c7cf277ce79447be3049 423 Gene3D G3DSA:3.30.70.270 114 172 4.5E-8 T 28-03-2018 AM393_RS28410 c6fd14fc89e6c7cf277ce79447be3049 423 Pfam PF13438 Domain of unknown function (DUF4113) 372 420 2.9E-20 T 28-03-2018 IPR025188 Domain of unknown function DUF4113 AM393_RS28410 c6fd14fc89e6c7cf277ce79447be3049 423 SUPERFAMILY SSF100879 246 345 8.24E-7 T 28-03-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AM393_RS28410 c6fd14fc89e6c7cf277ce79447be3049 423 Gene3D G3DSA:3.30.1490.100 247 362 8.2E-26 T 28-03-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AM393_RS28410 c6fd14fc89e6c7cf277ce79447be3049 423 Pfam PF00817 impB/mucB/samB family 6 148 1.0E-32 T 28-03-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AM393_RS28410 c6fd14fc89e6c7cf277ce79447be3049 423 Gene3D G3DSA:1.10.150.20 173 246 8.8E-16 T 28-03-2018 AM393_RS03975 0a6f72d7a81887c5ff6d9820e11cd695 115 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 3 113 3.1E-53 T 28-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS03975 0a6f72d7a81887c5ff6d9820e11cd695 115 SUPERFAMILY SSF50104 2 114 1.0E-47 T 28-03-2018 IPR008991 Translation protein SH3-like domain AM393_RS03975 0a6f72d7a81887c5ff6d9820e11cd695 115 Pfam PF01245 Ribosomal protein L19 3 113 9.2E-50 T 28-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS03975 0a6f72d7a81887c5ff6d9820e11cd695 115 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 2 114 30.413 T 28-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS03975 0a6f72d7a81887c5ff6d9820e11cd695 115 PRINTS PR00061 Ribosomal protein L19 signature 34 63 9.8E-43 T 28-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS03975 0a6f72d7a81887c5ff6d9820e11cd695 115 PRINTS PR00061 Ribosomal protein L19 signature 88 113 9.8E-43 T 28-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS03975 0a6f72d7a81887c5ff6d9820e11cd695 115 PRINTS PR00061 Ribosomal protein L19 signature 4 33 9.8E-43 T 28-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS03975 0a6f72d7a81887c5ff6d9820e11cd695 115 PIRSF PIRSF002191 1 115 2.3E-50 T 28-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS03975 0a6f72d7a81887c5ff6d9820e11cd695 115 ProSitePatterns PS01015 Ribosomal protein L19 signature. 86 101 - T 28-03-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM393_RS12915 9b9ebaa162a4713143d02b7efbe375be 397 Pfam PF07690 Major Facilitator Superfamily 251 385 3.4E-15 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS12915 9b9ebaa162a4713143d02b7efbe375be 397 Pfam PF07690 Major Facilitator Superfamily 23 229 2.7E-22 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS12915 9b9ebaa162a4713143d02b7efbe375be 397 Gene3D G3DSA:1.20.1250.20 213 397 1.6E-23 T 28-03-2018 AM393_RS12915 9b9ebaa162a4713143d02b7efbe375be 397 Gene3D G3DSA:1.20.1250.20 5 209 4.7E-24 T 28-03-2018 AM393_RS12915 9b9ebaa162a4713143d02b7efbe375be 397 SUPERFAMILY SSF103473 13 391 1.7E-55 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS23265 9bbf1f939c316bbf90c4781108c22f0e 108 SUPERFAMILY SSF103481 8 105 2.75E-6 T 28-03-2018 AM393_RS23265 9bbf1f939c316bbf90c4781108c22f0e 108 Pfam PF02694 Uncharacterised BCR, YnfA/UPF0060 family 1 107 2.8E-45 T 28-03-2018 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 AM393_RS23265 9bbf1f939c316bbf90c4781108c22f0e 108 Hamap MF_00010 UPF0060 membrane protein YnfA [ynfA]. 2 106 22.467 T 28-03-2018 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 AM393_RS09990 3952c523f1caeee71e4cc0dcf0674ce4 304 Pfam PF03466 LysR substrate binding domain 88 292 2.2E-39 T 28-03-2018 IPR005119 LysR, substrate-binding AM393_RS09990 3952c523f1caeee71e4cc0dcf0674ce4 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 5.0E-17 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS09990 3952c523f1caeee71e4cc0dcf0674ce4 304 Gene3D G3DSA:3.40.190.10 89 173 1.6E-14 T 28-03-2018 AM393_RS09990 3952c523f1caeee71e4cc0dcf0674ce4 304 SUPERFAMILY SSF53850 88 297 1.56E-40 T 28-03-2018 AM393_RS09990 3952c523f1caeee71e4cc0dcf0674ce4 304 Gene3D G3DSA:3.40.190.10 174 261 1.0E-19 T 28-03-2018 AM393_RS09990 3952c523f1caeee71e4cc0dcf0674ce4 304 Gene3D G3DSA:1.10.10.10 3 84 4.4E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS09990 3952c523f1caeee71e4cc0dcf0674ce4 304 SUPERFAMILY SSF46785 4 112 1.01E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS24800 1147e90131dc38328c884d39160d8b00 540 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 74 443 1.7E-70 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain AM393_RS24800 1147e90131dc38328c884d39160d8b00 540 Gene3D G3DSA:3.10.105.10 298 508 1.2E-39 T 28-03-2018 AM393_RS24800 1147e90131dc38328c884d39160d8b00 540 PIRSF PIRSF002741 5 539 6.0E-69 T 28-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AM393_RS24800 1147e90131dc38328c884d39160d8b00 540 SUPERFAMILY SSF53850 27 538 6.7E-105 T 28-03-2018 AM393_RS24800 1147e90131dc38328c884d39160d8b00 540 Gene3D G3DSA:3.40.190.10 153 297 4.2E-24 T 28-03-2018 AM393_RS24800 1147e90131dc38328c884d39160d8b00 540 TIGRFAM TIGR04028 SBP_KPN_01854: ABC transporter substrate binding protein, KPN_01854 family 32 538 1.5E-266 T 28-03-2018 IPR023920 ABC transporter, substrate-binding protein, KPN01854 AM393_RS24800 1147e90131dc38328c884d39160d8b00 540 Gene3D G3DSA:3.90.76.10 53 152 1.8E-26 T 28-03-2018 AM393_RS12365 f45ad7076a1e4f1c3b0d860f1802610e 313 Pfam PF13407 Periplasmic binding protein domain 30 285 9.5E-56 T 28-03-2018 IPR025997 Periplasmic binding protein AM393_RS12365 f45ad7076a1e4f1c3b0d860f1802610e 313 SUPERFAMILY SSF53822 9 307 8.25E-80 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AM393_RS12365 f45ad7076a1e4f1c3b0d860f1802610e 313 Gene3D G3DSA:3.40.50.2300 28 133 2.7E-23 T 28-03-2018 AM393_RS12365 f45ad7076a1e4f1c3b0d860f1802610e 313 Gene3D G3DSA:3.40.50.2300 134 311 5.5E-38 T 28-03-2018 AM393_RS00730 abe663cf62443c6ca104e9ed7fe156ac 247 Pfam PF13649 Methyltransferase domain 60 158 1.5E-13 T 28-03-2018 AM393_RS00730 abe663cf62443c6ca104e9ed7fe156ac 247 Hamap MF_01589 Carboxy-S-adenosyl-L-methionine synthase [cmoA]. 3 242 42.714 T 28-03-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 AM393_RS00730 abe663cf62443c6ca104e9ed7fe156ac 247 SUPERFAMILY SSF53335 20 242 1.34E-41 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM393_RS00730 abe663cf62443c6ca104e9ed7fe156ac 247 PIRSF PIRSF006325 1 243 1.8E-130 T 28-03-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 AM393_RS00730 abe663cf62443c6ca104e9ed7fe156ac 247 Gene3D G3DSA:3.40.50.150 18 247 1.1E-42 T 28-03-2018 AM393_RS00730 abe663cf62443c6ca104e9ed7fe156ac 247 TIGRFAM TIGR00740 TIGR00740: tRNA (cmo5U34)-methyltransferase 4 242 1.4E-130 T 28-03-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 AM393_RS10925 6efa3ee2473f0bf11a4d915ea19d6cbb 344 TIGRFAM TIGR00776 RhaT: RhaT L-rhamnose-proton symporter family protein 7 342 3.7E-111 T 28-03-2018 AM393_RS10925 6efa3ee2473f0bf11a4d915ea19d6cbb 344 Hamap MF_01532 L-rhamnose-proton symporter [rhaT]. 1 344 46.034 T 28-03-2018 IPR004673 L-rhamnose-proton symport, RhaT GO:0008645|GO:0015153|GO:0016021 AM393_RS10925 6efa3ee2473f0bf11a4d915ea19d6cbb 344 Pfam PF06379 L-rhamnose-proton symport protein (RhaT) 1 344 1.1E-214 T 28-03-2018 IPR004673 L-rhamnose-proton symport, RhaT GO:0008645|GO:0015153|GO:0016021 AM393_RS16510 3968088cc1dd35ce649288ae6f3c6877 233 Gene3D G3DSA:3.40.50.620 1 231 1.4E-54 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM393_RS16510 3968088cc1dd35ce649288ae6f3c6877 233 SUPERFAMILY SSF52402 1 214 3.97E-70 T 28-03-2018 AM393_RS16510 3968088cc1dd35ce649288ae6f3c6877 233 PIRSF PIRSF006293 1 225 7.6E-85 T 28-03-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 AM393_RS16510 3968088cc1dd35ce649288ae6f3c6877 233 Pfam PF06508 Queuosine biosynthesis protein QueC 3 213 1.8E-83 T 28-03-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 AM393_RS16510 3968088cc1dd35ce649288ae6f3c6877 233 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 2 219 51.397 T 28-03-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 AM393_RS16510 3968088cc1dd35ce649288ae6f3c6877 233 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 4 206 9.0E-86 T 28-03-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 AM393_RS00945 cd919edde78423b8a20f555af590e58e 559 SMART SM00267 382 556 3.4E-65 T 28-03-2018 IPR000160 GGDEF domain AM393_RS00945 cd919edde78423b8a20f555af590e58e 559 Pfam PF00990 Diguanylate cyclase, GGDEF domain 393 552 2.4E-46 T 28-03-2018 IPR000160 GGDEF domain AM393_RS00945 cd919edde78423b8a20f555af590e58e 559 Gene3D G3DSA:3.30.450.20 225 344 1.2E-6 T 28-03-2018 AM393_RS00945 cd919edde78423b8a20f555af590e58e 559 Gene3D G3DSA:3.30.70.270 384 557 3.8E-53 T 28-03-2018 AM393_RS00945 cd919edde78423b8a20f555af590e58e 559 Pfam PF17151 Periplasmic sensor domain 37 221 3.3E-79 T 28-03-2018 IPR033416 Periplasmic sensor domain CHASE7 AM393_RS00945 cd919edde78423b8a20f555af590e58e 559 SUPERFAMILY SSF55073 398 556 2.35E-46 T 28-03-2018 IPR029787 Nucleotide cyclase AM393_RS00945 cd919edde78423b8a20f555af590e58e 559 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 389 554 4.3E-55 T 28-03-2018 IPR000160 GGDEF domain AM393_RS04150 91157f89d316a34c3db76d937e70b885 182 Pfam PF00419 Fimbrial protein 28 179 3.3E-17 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM393_RS04150 91157f89d316a34c3db76d937e70b885 182 SUPERFAMILY SSF49401 26 179 3.33E-23 T 28-03-2018 IPR008966 Adhesion domain AM393_RS04150 91157f89d316a34c3db76d937e70b885 182 Gene3D G3DSA:2.60.40.1090 25 180 2.8E-26 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM393_RS17665 e84d89dcb093ae1a87ea18ac7faae26e 414 Gene3D G3DSA:2.30.30.60 201 251 9.4E-10 T 28-03-2018 AM393_RS17665 e84d89dcb093ae1a87ea18ac7faae26e 414 SUPERFAMILY SSF82689 322 396 1.57E-5 T 28-03-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 AM393_RS17665 e84d89dcb093ae1a87ea18ac7faae26e 414 Pfam PF00924 Mechanosensitive ion channel 142 396 1.2E-65 T 28-03-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AM393_RS17665 e84d89dcb093ae1a87ea18ac7faae26e 414 SUPERFAMILY SSF50182 186 252 4.58E-12 T 28-03-2018 IPR010920 LSM domain AM393_RS03995 aca751389b6ca8baaceb62c9854ce11d 454 Gene3D G3DSA:3.40.50.300 92 297 9.1E-40 T 28-03-2018 AM393_RS03995 aca751389b6ca8baaceb62c9854ce11d 454 SUPERFAMILY SSF47446 329 431 4.58E-39 T 28-03-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 AM393_RS03995 aca751389b6ca8baaceb62c9854ce11d 454 SMART SM00382 99 247 1.1E-7 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS03995 aca751389b6ca8baaceb62c9854ce11d 454 Pfam PF02978 Signal peptide binding domain 329 427 5.8E-33 T 28-03-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 AM393_RS03995 aca751389b6ca8baaceb62c9854ce11d 454 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 28-03-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AM393_RS03995 aca751389b6ca8baaceb62c9854ce11d 454 Gene3D G3DSA:1.20.120.140 1 91 6.1E-30 T 28-03-2018 AM393_RS03995 aca751389b6ca8baaceb62c9854ce11d 454 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 5.9E-22 T 28-03-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AM393_RS03995 aca751389b6ca8baaceb62c9854ce11d 454 Gene3D G3DSA:1.10.260.30 328 433 1.1E-38 T 28-03-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 AM393_RS03995 aca751389b6ca8baaceb62c9854ce11d 454 SMART SM00962 100 296 2.2E-119 T 28-03-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AM393_RS03995 aca751389b6ca8baaceb62c9854ce11d 454 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 429 1.4E-180 T 28-03-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 AM393_RS03995 aca751389b6ca8baaceb62c9854ce11d 454 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 440 34.716 T 28-03-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 AM393_RS03995 aca751389b6ca8baaceb62c9854ce11d 454 SMART SM00963 1 86 1.6E-36 T 28-03-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AM393_RS03995 aca751389b6ca8baaceb62c9854ce11d 454 SUPERFAMILY SSF52540 42 354 3.19E-58 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS03995 aca751389b6ca8baaceb62c9854ce11d 454 Pfam PF00448 SRP54-type protein, GTPase domain 100 296 1.7E-75 T 28-03-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AM393_RS07820 52cf345ce286ee078d89d13776483308 88 Gene3D G3DSA:3.30.1660.10 23 88 8.6E-27 T 28-03-2018 IPR025543 Dodecin-like AM393_RS07820 52cf345ce286ee078d89d13776483308 88 SUPERFAMILY SSF159871 5 88 2.75E-25 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 AM393_RS07820 52cf345ce286ee078d89d13776483308 88 Pfam PF07338 Protein of unknown function (DUF1471) 35 88 4.0E-23 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 AM393_RS18710 38d976d3392eaa089ba2c12d9c1135a8 38 TIGRFAM TIGR02106 cyd_oper_ybgT: cyd operon protein YbgT 1 30 2.2E-20 T 28-03-2018 IPR011724 Cyd operon protein YbgT MetaCyc: PWY-7545 AM393_RS18710 38d976d3392eaa089ba2c12d9c1135a8 38 Pfam PF08173 Membrane bound YbgT-like protein 1 26 1.7E-14 T 28-03-2018 IPR012994 Membrane bound YbgT-like AM393_RS12725 362074756c9ef4b5f14a3f0b89e4e77f 1109 Pfam PF00924 Mechanosensitive ion channel 875 1074 1.3E-52 T 28-03-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AM393_RS12725 362074756c9ef4b5f14a3f0b89e4e77f 1109 SUPERFAMILY SSF82689 985 1083 6.54E-16 T 28-03-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 AM393_RS12725 362074756c9ef4b5f14a3f0b89e4e77f 1109 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 947 981 - T 28-03-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 AM393_RS12725 362074756c9ef4b5f14a3f0b89e4e77f 1109 SUPERFAMILY SSF82861 834 916 2.75E-8 T 28-03-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 AM393_RS12725 362074756c9ef4b5f14a3f0b89e4e77f 1109 SUPERFAMILY SSF50182 918 983 1.01E-16 T 28-03-2018 IPR010920 LSM domain AM393_RS12725 362074756c9ef4b5f14a3f0b89e4e77f 1109 Gene3D G3DSA:3.30.70.100 985 1079 5.7E-11 T 28-03-2018 AM393_RS12725 362074756c9ef4b5f14a3f0b89e4e77f 1109 Gene3D G3DSA:2.30.30.60 933 982 2.7E-12 T 28-03-2018 AM393_RS12725 362074756c9ef4b5f14a3f0b89e4e77f 1109 Gene3D G3DSA:1.20.5.110 206 800 8.2E-4 T 28-03-2018 AM393_RS12725 362074756c9ef4b5f14a3f0b89e4e77f 1109 Pfam PF12795 Mechanosensitive ion channel porin domain 31 255 6.0E-55 T 28-03-2018 IPR024393 Mechanosensitive ion channel MscS, porin domain AM393_RS12725 362074756c9ef4b5f14a3f0b89e4e77f 1109 Pfam PF12794 Mechanosensitive ion channel inner membrane domain 1 478 814 3.4E-113 T 28-03-2018 IPR025692 Mechanosensitive ion channel inner membrane domain 1 AM393_RS16185 03c5ba1e7dccf01dea2dc43dbd00fd8b 457 Pfam PF00324 Amino acid permease 15 451 6.8E-106 T 28-03-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 AM393_RS16185 03c5ba1e7dccf01dea2dc43dbd00fd8b 457 ProSitePatterns PS00218 Amino acid permeases signature. 40 70 - T 28-03-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 AM393_RS16185 03c5ba1e7dccf01dea2dc43dbd00fd8b 457 PIRSF PIRSF006060 1 456 1.2E-75 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AM393_RS04095 864d121b31633e0afe015027fb5d7617 316 Gene3D G3DSA:3.40.800.10 8 312 1.6E-95 T 28-03-2018 AM393_RS04095 864d121b31633e0afe015027fb5d7617 316 PRINTS PR00116 Arginase signature 122 137 1.5E-12 T 28-03-2018 IPR006035 Ureohydrolase GO:0046872 AM393_RS04095 864d121b31633e0afe015027fb5d7617 316 PRINTS PR00116 Arginase signature 235 264 1.5E-12 T 28-03-2018 IPR006035 Ureohydrolase GO:0046872 AM393_RS04095 864d121b31633e0afe015027fb5d7617 316 TIGRFAM TIGR01230 agmatinase: agmatinase 36 308 7.7E-58 T 28-03-2018 IPR005925 Agmatinase-related KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305|Reactome: R-HSA-351143 AM393_RS04095 864d121b31633e0afe015027fb5d7617 316 Pfam PF00491 Arginase family 36 307 1.5E-82 T 28-03-2018 IPR006035 Ureohydrolase GO:0046872 AM393_RS04095 864d121b31633e0afe015027fb5d7617 316 ProSitePatterns PS01053 Arginase family signature. 238 259 - T 28-03-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 AM393_RS04095 864d121b31633e0afe015027fb5d7617 316 SUPERFAMILY SSF52768 14 309 5.22E-97 T 28-03-2018 AM393_RS04095 864d121b31633e0afe015027fb5d7617 316 PIRSF PIRSF036979 14 313 4.2E-97 T 28-03-2018 IPR006035 Ureohydrolase GO:0046872 AM393_RS01925 d8b5eacb68bad1306f26c0a99c2ec9d5 425 Gene3D G3DSA:1.20.1250.20 8 211 2.5E-18 T 28-03-2018 AM393_RS01925 d8b5eacb68bad1306f26c0a99c2ec9d5 425 Gene3D G3DSA:1.20.1250.20 217 422 1.4E-21 T 28-03-2018 AM393_RS01925 d8b5eacb68bad1306f26c0a99c2ec9d5 425 TIGRFAM TIGR00897 2A0118: polyol permease 1 406 1.6E-204 T 28-03-2018 IPR004748 Polyol permease GO:0005215|GO:0006810|GO:0016021 AM393_RS01925 d8b5eacb68bad1306f26c0a99c2ec9d5 425 Pfam PF07690 Major Facilitator Superfamily 25 313 8.7E-20 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS01925 d8b5eacb68bad1306f26c0a99c2ec9d5 425 SUPERFAMILY SSF103473 6 415 4.45E-45 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS28340 49c0f384d97b55d98dc6dbf69f61f084 142 Pfam PF10784 Plasmid stability protein 8 79 4.6E-24 T 28-03-2018 IPR019720 Plasmid stability protein, StbB AM393_RS20510 301bf27cbcf7fc8dddd4575bc2724b5c 427 TIGRFAM TIGR01412 tat_substr_1: Tat-translocated enzyme 7 426 5.6E-181 T 28-03-2018 IPR006313 Deferrochelatase/peroxidase EfeB GO:0004601|GO:0015684|GO:0020037|GO:0033212 AM393_RS20510 301bf27cbcf7fc8dddd4575bc2724b5c 427 SUPERFAMILY SSF54909 58 419 3.4E-97 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel AM393_RS20510 301bf27cbcf7fc8dddd4575bc2724b5c 427 Pfam PF04261 Dyp-type peroxidase family 65 413 1.1E-117 T 28-03-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 AM393_RS20510 301bf27cbcf7fc8dddd4575bc2724b5c 427 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 65 413 2.9E-104 T 28-03-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 AM393_RS20510 301bf27cbcf7fc8dddd4575bc2724b5c 427 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 13 39 4.2E-4 T 28-03-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AM393_RS28040 6fed3e749ad0da9877d1682752df1832 201 SUPERFAMILY SSF53041 4 148 1.44E-39 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AM393_RS28040 6fed3e749ad0da9877d1682752df1832 201 Gene3D G3DSA:1.20.5.40 119 146 5.1E-15 T 28-03-2018 AM393_RS28040 6fed3e749ad0da9877d1682752df1832 201 SUPERFAMILY SSF46689 156 199 6.27E-7 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS28040 6fed3e749ad0da9877d1682752df1832 201 SMART SM00857 5 148 5.7E-52 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AM393_RS28040 6fed3e749ad0da9877d1682752df1832 201 Gene3D G3DSA:3.40.50.1390 1 118 1.7E-34 T 28-03-2018 AM393_RS28040 6fed3e749ad0da9877d1682752df1832 201 Gene3D G3DSA:1.10.10.60 148 198 2.1E-10 T 28-03-2018 AM393_RS28040 6fed3e749ad0da9877d1682752df1832 201 ProSitePatterns PS00397 Site-specific recombinases active site. 8 16 - T 28-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 AM393_RS28040 6fed3e749ad0da9877d1682752df1832 201 Pfam PF13384 Homeodomain-like domain 166 198 1.3E-5 T 28-03-2018 AM393_RS28040 6fed3e749ad0da9877d1682752df1832 201 Pfam PF00239 Resolvase, N terminal domain 5 147 5.6E-41 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AM393_RS05780 06ee29598269e5fef153f1a8522458c4 190 SUPERFAMILY SSF49899 2 179 3.24E-33 T 28-03-2018 IPR013320 Concanavalin A-like lectin/glucanase domain AM393_RS05780 06ee29598269e5fef153f1a8522458c4 190 Pfam PF07081 Protein of unknown function (DUF1349) 7 180 5.1E-66 T 28-03-2018 IPR009784 Protein of unknown function DUF1349 AM393_RS05780 06ee29598269e5fef153f1a8522458c4 190 PIRSF PIRSF022704 2 190 2.6E-67 T 28-03-2018 IPR015987 Uncharacterised conserved protein UCP022704 AM393_RS05780 06ee29598269e5fef153f1a8522458c4 190 Gene3D G3DSA:2.60.120.200 1 181 2.7E-36 T 28-03-2018 AM393_RS21260 74fe3b1f05739b8322255d5768c045fc 331 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 324 2.2E-135 T 28-03-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM393_RS21260 74fe3b1f05739b8322255d5768c045fc 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 144 162 5.1E-48 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM393_RS21260 74fe3b1f05739b8322255d5768c045fc 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 171 187 5.1E-48 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM393_RS21260 74fe3b1f05739b8322255d5768c045fc 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 109 122 5.1E-48 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM393_RS21260 74fe3b1f05739b8322255d5768c045fc 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 268 283 5.1E-48 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM393_RS21260 74fe3b1f05739b8322255d5768c045fc 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 228 245 5.1E-48 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM393_RS21260 74fe3b1f05739b8322255d5768c045fc 331 Gene3D G3DSA:3.40.50.720 1 159 8.6E-79 T 28-03-2018 AM393_RS21260 74fe3b1f05739b8322255d5768c045fc 331 SUPERFAMILY SSF55347 149 312 4.46E-83 T 28-03-2018 AM393_RS21260 74fe3b1f05739b8322255d5768c045fc 331 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 155 312 3.6E-73 T 28-03-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM393_RS21260 74fe3b1f05739b8322255d5768c045fc 331 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 102 1.1E-41 T 28-03-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM393_RS21260 74fe3b1f05739b8322255d5768c045fc 331 SMART SM00846 3 150 5.1E-95 T 28-03-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM393_RS21260 74fe3b1f05739b8322255d5768c045fc 331 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 148 155 - T 28-03-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM393_RS21260 74fe3b1f05739b8322255d5768c045fc 331 Gene3D G3DSA:3.30.360.10 160 314 4.1E-84 T 28-03-2018 AM393_RS21260 74fe3b1f05739b8322255d5768c045fc 331 SUPERFAMILY SSF51735 3 166 4.17E-67 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS21260 74fe3b1f05739b8322255d5768c045fc 331 PIRSF PIRSF000149 1 331 5.8E-137 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM393_RS05450 6dc74bd5b240a022472f1ee70f1f9e70 719 Pfam PF01553 Acyltransferase 16 137 1.1E-16 T 28-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AM393_RS05450 6dc74bd5b240a022472f1ee70f1f9e70 719 Gene3D G3DSA:3.40.50.980 376 525 6.7E-45 T 28-03-2018 AM393_RS05450 6dc74bd5b240a022472f1ee70f1f9e70 719 ProSitePatterns PS00455 Putative AMP-binding domain signature. 370 381 - T 28-03-2018 IPR020845 AMP-binding, conserved site AM393_RS05450 6dc74bd5b240a022472f1ee70f1f9e70 719 SUPERFAMILY SSF56801 203 713 8.77E-99 T 28-03-2018 AM393_RS05450 6dc74bd5b240a022472f1ee70f1f9e70 719 Gene3D G3DSA:3.40.1130.10 5 209 6.6E-24 T 28-03-2018 AM393_RS05450 6dc74bd5b240a022472f1ee70f1f9e70 719 Hamap MF_01162 Bifunctional protein Aas [aas]. 1 717 49.484 T 28-03-2018 IPR023775 Bifunctional protein Aas GO:0006631|GO:0008654|GO:0008779|GO:0008922 KEGG: 00071+6.2.1.20|KEGG: 00564+2.3.1.40|MetaCyc: PWY-6622|MetaCyc: PWY-7032 AM393_RS05450 6dc74bd5b240a022472f1ee70f1f9e70 719 Gene3D G3DSA:3.30.300.30 613 717 4.9E-10 T 28-03-2018 AM393_RS05450 6dc74bd5b240a022472f1ee70f1f9e70 719 SUPERFAMILY SSF69593 10 170 7.19E-18 T 28-03-2018 AM393_RS05450 6dc74bd5b240a022472f1ee70f1f9e70 719 Gene3D G3DSA:2.30.38.10 526 612 1.4E-14 T 28-03-2018 AM393_RS05450 6dc74bd5b240a022472f1ee70f1f9e70 719 SMART SM00563 30 140 3.4E-26 T 28-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AM393_RS05450 6dc74bd5b240a022472f1ee70f1f9e70 719 Pfam PF00501 AMP-binding enzyme 231 619 1.1E-68 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AM393_RS05450 6dc74bd5b240a022472f1ee70f1f9e70 719 Gene3D G3DSA:3.40.50.980 210 375 8.2E-22 T 28-03-2018 AM393_RS06575 ec609813c2f24349a0bd99b51dfcd6b4 290 Pfam PF13614 AAA domain 1 146 1.2E-20 T 28-03-2018 IPR025669 AAA domain AM393_RS06575 ec609813c2f24349a0bd99b51dfcd6b4 290 Gene3D G3DSA:3.40.50.300 1 281 1.1E-30 T 28-03-2018 AM393_RS06575 ec609813c2f24349a0bd99b51dfcd6b4 290 SUPERFAMILY SSF52540 1 275 7.98E-31 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS21770 90242137b78136680ea4d21b7262a9e7 644 ProSitePatterns PS01175 Ribonuclease II family signature. 484 508 - T 28-03-2018 IPR022966 Ribonuclease II/R, conserved site AM393_RS21770 90242137b78136680ea4d21b7262a9e7 644 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 6 641 1.5E-242 T 28-03-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 AM393_RS21770 90242137b78136680ea4d21b7262a9e7 644 SUPERFAMILY SSF50249 176 556 9.42E-115 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM393_RS21770 90242137b78136680ea4d21b7262a9e7 644 Gene3D G3DSA:2.40.50.140 22 74 0.32 T 28-03-2018 AM393_RS21770 90242137b78136680ea4d21b7262a9e7 644 SUPERFAMILY SSF50249 8 80 2.19E-15 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM393_RS21770 90242137b78136680ea4d21b7262a9e7 644 Hamap MF_01036 Exoribonuclease 2 [rnb]. 1 643 45.073 T 28-03-2018 IPR011804 Ribonuclease II GO:0003723|GO:0006401|GO:0008859 AM393_RS21770 90242137b78136680ea4d21b7262a9e7 644 SUPERFAMILY SSF50249 83 171 2.48E-32 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM393_RS21770 90242137b78136680ea4d21b7262a9e7 644 SUPERFAMILY SSF50249 560 641 1.71E-19 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM393_RS21770 90242137b78136680ea4d21b7262a9e7 644 SMART SM00357 23 79 2.2E-14 T 28-03-2018 IPR011129 Cold shock domain GO:0003676 AM393_RS21770 90242137b78136680ea4d21b7262a9e7 644 Pfam PF08206 Ribonuclease B OB domain 24 80 7.5E-19 T 28-03-2018 IPR013223 Ribonuclease B, N-terminal OB domain AM393_RS21770 90242137b78136680ea4d21b7262a9e7 644 Pfam PF00575 S1 RNA binding domain 559 636 3.1E-10 T 28-03-2018 IPR003029 S1 domain GO:0003676 AM393_RS21770 90242137b78136680ea4d21b7262a9e7 644 Pfam PF00773 RNB domain 189 516 3.1E-84 T 28-03-2018 AM393_RS21770 90242137b78136680ea4d21b7262a9e7 644 TIGRFAM TIGR02062 RNase_B: exoribonuclease II 1 642 0.0 T 28-03-2018 IPR011804 Ribonuclease II GO:0003723|GO:0006401|GO:0008859 AM393_RS21770 90242137b78136680ea4d21b7262a9e7 644 SMART SM00955 189 517 4.9E-126 T 28-03-2018 AM393_RS21770 90242137b78136680ea4d21b7262a9e7 644 Gene3D G3DSA:2.40.50.140 558 644 3.9E-7 T 28-03-2018 AM393_RS20995 31e761becfa66dd5c21e79d2ee5b4c96 130 Gene3D G3DSA:3.30.2130.10 67 122 2.8E-4 T 28-03-2018 AM393_RS20995 31e761becfa66dd5c21e79d2ee5b4c96 130 SUPERFAMILY SSF55021 4 67 1.02E-6 T 28-03-2018 AM393_RS20995 31e761becfa66dd5c21e79d2ee5b4c96 130 SUPERFAMILY SSF55021 75 123 3.67E-5 T 28-03-2018 AM393_RS20995 31e761becfa66dd5c21e79d2ee5b4c96 130 Gene3D G3DSA:3.30.70.260 1 61 3.7E-4 T 28-03-2018 AM393_RS15875 7ca5ae418f1ef0d85aae55e5052977fd 188 Pfam PF00877 NlpC/P60 family 61 165 3.7E-23 T 28-03-2018 IPR000064 Endopeptidase, NLPC/P60 domain AM393_RS15875 7ca5ae418f1ef0d85aae55e5052977fd 188 SUPERFAMILY SSF54001 49 171 1.31E-32 T 28-03-2018 AM393_RS15875 7ca5ae418f1ef0d85aae55e5052977fd 188 Gene3D G3DSA:3.90.1720.10 48 178 1.9E-31 T 28-03-2018 AM393_RS04480 90911aa5bd84e2fc1db4168cbd3b0d7d 516 SMART SM00065 20 167 1.0E-17 T 28-03-2018 IPR003018 GAF domain GO:0005515 AM393_RS04480 90911aa5bd84e2fc1db4168cbd3b0d7d 516 Gene3D G3DSA:1.10.8.60 360 434 2.7E-19 T 28-03-2018 AM393_RS04480 90911aa5bd84e2fc1db4168cbd3b0d7d 516 Pfam PF00158 Sigma-54 interaction domain 187 353 1.3E-66 T 28-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AM393_RS04480 90911aa5bd84e2fc1db4168cbd3b0d7d 516 SUPERFAMILY SSF46689 453 505 5.38E-8 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS04480 90911aa5bd84e2fc1db4168cbd3b0d7d 516 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 273 288 - T 28-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AM393_RS04480 90911aa5bd84e2fc1db4168cbd3b0d7d 516 Gene3D G3DSA:3.40.50.300 182 359 8.2E-27 T 28-03-2018 AM393_RS04480 90911aa5bd84e2fc1db4168cbd3b0d7d 516 SUPERFAMILY SSF52540 186 421 7.57E-67 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS04480 90911aa5bd84e2fc1db4168cbd3b0d7d 516 Gene3D G3DSA:3.30.450.40 6 172 5.3E-17 T 28-03-2018 IPR029016 GAF domain-like AM393_RS04480 90911aa5bd84e2fc1db4168cbd3b0d7d 516 Pfam PF01590 GAF domain 25 161 6.2E-9 T 28-03-2018 IPR003018 GAF domain GO:0005515 AM393_RS04480 90911aa5bd84e2fc1db4168cbd3b0d7d 516 Hamap MF_01314 Anaerobic nitric oxide reductase transcription regulator NorR [norR]. 1 506 61.89 T 28-03-2018 IPR023944 Anaerobic nitric oxide reductase transcription regulator GO:0003700|GO:0006355 AM393_RS04480 90911aa5bd84e2fc1db4168cbd3b0d7d 516 Gene3D G3DSA:1.10.10.60 435 508 5.1E-11 T 28-03-2018 AM393_RS04480 90911aa5bd84e2fc1db4168cbd3b0d7d 516 SUPERFAMILY SSF55781 23 170 3.93E-16 T 28-03-2018 IPR029016 GAF domain-like AM393_RS04480 90911aa5bd84e2fc1db4168cbd3b0d7d 516 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 211 224 - T 28-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AM393_RS04480 90911aa5bd84e2fc1db4168cbd3b0d7d 516 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 400 409 - T 28-03-2018 IPR025944 Sigma-54 interaction domain, conserved site AM393_RS04480 90911aa5bd84e2fc1db4168cbd3b0d7d 516 SMART SM00382 207 350 1.7E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS16740 9c707f7d55f1d432dd643ea15fd77868 183 Gene3D G3DSA:3.40.50.2020 4 180 2.1E-43 T 28-03-2018 AM393_RS16740 9c707f7d55f1d432dd643ea15fd77868 183 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 11 178 8.9E-73 T 28-03-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 AM393_RS16740 9c707f7d55f1d432dd643ea15fd77868 183 SUPERFAMILY SSF53271 13 180 9.66E-53 T 28-03-2018 IPR029057 Phosphoribosyltransferase-like AM393_RS16740 9c707f7d55f1d432dd643ea15fd77868 183 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 11 180 38.107 T 28-03-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 AM393_RS16740 9c707f7d55f1d432dd643ea15fd77868 183 Pfam PF00156 Phosphoribosyl transferase domain 31 155 2.4E-15 T 28-03-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 AM393_RS09820 60ab8d6f7ea62ccb4085aa9059abf690 248 Gene3D G3DSA:3.40.50.80 97 248 1.3E-24 T 28-03-2018 AM393_RS09820 60ab8d6f7ea62ccb4085aa9059abf690 248 Pfam PF00175 Oxidoreductase NAD-binding domain 111 222 3.2E-18 T 28-03-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AM393_RS09820 60ab8d6f7ea62ccb4085aa9059abf690 248 SUPERFAMILY SSF63380 3 100 1.97E-25 T 28-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AM393_RS09820 60ab8d6f7ea62ccb4085aa9059abf690 248 Gene3D G3DSA:2.40.30.10 1 95 1.1E-16 T 28-03-2018 AM393_RS09820 60ab8d6f7ea62ccb4085aa9059abf690 248 SUPERFAMILY SSF52343 104 248 2.62E-36 T 28-03-2018 AM393_RS09820 60ab8d6f7ea62ccb4085aa9059abf690 248 Pfam PF00970 Oxidoreductase FAD-binding domain 20 88 9.0E-6 T 28-03-2018 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 AM393_RS20640 9e90c7bdfe72cd5819ea0b01cbc96bca 354 Pfam PF00581 Rhodanese-like domain 138 232 1.5E-13 T 28-03-2018 IPR001763 Rhodanese-like domain AM393_RS20640 9e90c7bdfe72cd5819ea0b01cbc96bca 354 Pfam PF12368 Rhodanase C-terminal 246 307 1.9E-19 T 28-03-2018 IPR022111 Rhodanase, C-terminal AM393_RS20640 9e90c7bdfe72cd5819ea0b01cbc96bca 354 Hamap MF_00469 UPF0176 protein YceA [yceA]. 22 277 39.197 T 28-03-2018 IPR020936 Uncharacterised protein family UPF0176 AM393_RS20640 9e90c7bdfe72cd5819ea0b01cbc96bca 354 Gene3D G3DSA:3.40.250.10 130 243 1.4E-28 T 28-03-2018 IPR001763 Rhodanese-like domain AM393_RS20640 9e90c7bdfe72cd5819ea0b01cbc96bca 354 SMART SM00450 136 237 1.2E-24 T 28-03-2018 IPR001763 Rhodanese-like domain AM393_RS20640 9e90c7bdfe72cd5819ea0b01cbc96bca 354 SUPERFAMILY SSF52821 115 257 6.42E-32 T 28-03-2018 IPR001763 Rhodanese-like domain AM393_RS21080 f297c08a185a9f449c8ec450590c1979 402 SMART SM00471 19 139 4.1E-5 T 28-03-2018 IPR003607 HD/PDEase domain AM393_RS21080 f297c08a185a9f449c8ec450590c1979 402 SMART SM00471 216 351 1.9E-12 T 28-03-2018 IPR003607 HD/PDEase domain AM393_RS21080 f297c08a185a9f449c8ec450590c1979 402 Pfam PF01966 HD domain 221 341 5.4E-18 T 28-03-2018 IPR006674 HD domain AM393_RS21080 f297c08a185a9f449c8ec450590c1979 402 Pfam PF01966 HD domain 25 129 1.2E-8 T 28-03-2018 IPR006674 HD domain AM393_RS21080 f297c08a185a9f449c8ec450590c1979 402 TIGRFAM TIGR00277 HDIG: HDIG domain 220 311 1.1E-7 T 28-03-2018 IPR006675 HDIG domain AM393_RS21080 f297c08a185a9f449c8ec450590c1979 402 SUPERFAMILY SSF109604 211 363 1.17E-27 T 28-03-2018 AM393_RS21080 f297c08a185a9f449c8ec450590c1979 402 Gene3D G3DSA:1.10.3210.10 1 178 4.0E-18 T 28-03-2018 AM393_RS21080 f297c08a185a9f449c8ec450590c1979 402 Gene3D G3DSA:1.10.3210.10 182 393 6.1E-40 T 28-03-2018 AM393_RS21080 f297c08a185a9f449c8ec450590c1979 402 SUPERFAMILY SSF109604 18 156 2.17E-14 T 28-03-2018 AM393_RS12430 934efe3ae212d9c01b435ccfd2d6d073 150 TIGRFAM TIGR03293 PhnG_redo: phosphonate C-P lyase system protein PhnG 6 148 6.2E-52 T 28-03-2018 IPR009609 Phosphonate metabolism PhnG GO:0015716|GO:0019634 KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 AM393_RS12430 934efe3ae212d9c01b435ccfd2d6d073 150 Pfam PF06754 Phosphonate metabolism protein PhnG 7 147 2.4E-51 T 28-03-2018 IPR009609 Phosphonate metabolism PhnG GO:0015716|GO:0019634 KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 AM393_RS05350 63b8dcc8c4f71fbd949bba08f454d0da 417 Pfam PF11741 AMIN domain 39 142 3.5E-26 T 28-03-2018 IPR021731 AMIN domain AM393_RS05350 63b8dcc8c4f71fbd949bba08f454d0da 417 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 190 404 1.1E-49 T 28-03-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 AM393_RS05350 63b8dcc8c4f71fbd949bba08f454d0da 417 Gene3D G3DSA:3.40.630.40 187 409 3.5E-56 T 28-03-2018 AM393_RS05350 63b8dcc8c4f71fbd949bba08f454d0da 417 SMART SM00646 250 404 6.1E-69 T 28-03-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 AM393_RS05350 63b8dcc8c4f71fbd949bba08f454d0da 417 SUPERFAMILY SSF53187 188 284 5.34E-52 T 28-03-2018 AM393_RS05350 63b8dcc8c4f71fbd949bba08f454d0da 417 SUPERFAMILY SSF53187 331 407 5.34E-52 T 28-03-2018 AM393_RS17770 f8cfe768c9f2ab03d7d44ba7eb327dbe 1030 SUPERFAMILY SSF82693 562 664 7.32E-27 T 28-03-2018 AM393_RS17770 f8cfe768c9f2ab03d7d44ba7eb327dbe 1030 Gene3D G3DSA:1.20.1640.10 803 1022 3.1E-39 T 28-03-2018 AM393_RS17770 f8cfe768c9f2ab03d7d44ba7eb327dbe 1030 SUPERFAMILY SSF82693 801 850 1.03E-22 T 28-03-2018 AM393_RS17770 f8cfe768c9f2ab03d7d44ba7eb327dbe 1030 SUPERFAMILY SSF82693 665 714 1.03E-22 T 28-03-2018 AM393_RS17770 f8cfe768c9f2ab03d7d44ba7eb327dbe 1030 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1022 0.0 T 28-03-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 AM393_RS17770 f8cfe768c9f2ab03d7d44ba7eb327dbe 1030 Gene3D G3DSA:1.20.1640.10 288 507 2.6E-46 T 28-03-2018 AM393_RS17770 f8cfe768c9f2ab03d7d44ba7eb327dbe 1030 Gene3D G3DSA:3.30.70.1430 564 664 7.6E-21 T 28-03-2018 AM393_RS17770 f8cfe768c9f2ab03d7d44ba7eb327dbe 1030 SUPERFAMILY SSF82714 715 801 4.58E-19 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM393_RS17770 f8cfe768c9f2ab03d7d44ba7eb327dbe 1030 Pfam PF00873 AcrB/AcrD/AcrF family 1 1020 0.0 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS17770 f8cfe768c9f2ab03d7d44ba7eb327dbe 1030 SUPERFAMILY SSF82866 824 1020 2.22E-44 T 28-03-2018 AM393_RS17770 f8cfe768c9f2ab03d7d44ba7eb327dbe 1030 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 9.1E-84 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS17770 f8cfe768c9f2ab03d7d44ba7eb327dbe 1030 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 9.1E-84 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS17770 f8cfe768c9f2ab03d7d44ba7eb327dbe 1030 PRINTS PR00702 Acriflavin resistance protein family signature 337 360 9.1E-84 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS17770 f8cfe768c9f2ab03d7d44ba7eb327dbe 1030 PRINTS PR00702 Acriflavin resistance protein family signature 392 416 9.1E-84 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS17770 f8cfe768c9f2ab03d7d44ba7eb327dbe 1030 PRINTS PR00702 Acriflavin resistance protein family signature 618 632 9.1E-84 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS17770 f8cfe768c9f2ab03d7d44ba7eb327dbe 1030 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 9.1E-84 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS17770 f8cfe768c9f2ab03d7d44ba7eb327dbe 1030 PRINTS PR00702 Acriflavin resistance protein family signature 549 566 9.1E-84 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS17770 f8cfe768c9f2ab03d7d44ba7eb327dbe 1030 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 9.1E-84 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS17770 f8cfe768c9f2ab03d7d44ba7eb327dbe 1030 PRINTS PR00702 Acriflavin resistance protein family signature 364 385 9.1E-84 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS17770 f8cfe768c9f2ab03d7d44ba7eb327dbe 1030 SUPERFAMILY SSF82866 298 498 1.1E-47 T 28-03-2018 AM393_RS17770 f8cfe768c9f2ab03d7d44ba7eb327dbe 1030 Gene3D G3DSA:3.30.2090.10 714 802 8.3E-19 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM393_RS17770 f8cfe768c9f2ab03d7d44ba7eb327dbe 1030 SUPERFAMILY SSF82693 136 182 2.27E-22 T 28-03-2018 AM393_RS17770 f8cfe768c9f2ab03d7d44ba7eb327dbe 1030 SUPERFAMILY SSF82693 275 331 2.27E-22 T 28-03-2018 AM393_RS17770 f8cfe768c9f2ab03d7d44ba7eb327dbe 1030 Gene3D G3DSA:3.30.2090.10 181 276 1.0E-18 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM393_RS17770 f8cfe768c9f2ab03d7d44ba7eb327dbe 1030 SUPERFAMILY SSF82714 183 272 4.58E-20 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM393_RS17770 f8cfe768c9f2ab03d7d44ba7eb327dbe 1030 Gene3D G3DSA:3.30.70.1430 38 140 1.3E-26 T 28-03-2018 AM393_RS17770 f8cfe768c9f2ab03d7d44ba7eb327dbe 1030 SUPERFAMILY SSF82693 38 131 8.37E-26 T 28-03-2018 AM393_RS26710 b855aa36371d5708b7f0d3dfcf4d9e4d 298 SUPERFAMILY SSF103481 183 281 7.32E-14 T 28-03-2018 AM393_RS26710 b855aa36371d5708b7f0d3dfcf4d9e4d 298 Pfam PF00892 EamA-like transporter family 6 135 1.1E-12 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM393_RS26710 b855aa36371d5708b7f0d3dfcf4d9e4d 298 Pfam PF00892 EamA-like transporter family 149 276 5.6E-17 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM393_RS26710 b855aa36371d5708b7f0d3dfcf4d9e4d 298 SUPERFAMILY SSF103481 37 137 2.62E-14 T 28-03-2018 AM393_RS00660 d3d5805be0ece5c462861b296ad42522 324 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 12 305 3.7E-100 T 28-03-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 AM393_RS00660 d3d5805be0ece5c462861b296ad42522 324 Hamap MF_01944 Lipid A biosynthesis myristoyltransferase [lpxM]. 4 310 52.26 T 28-03-2018 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243|KEGG: 00600+2.3.1.24 AM393_RS00660 d3d5805be0ece5c462861b296ad42522 324 TIGRFAM TIGR02208 lipid_A_msbB: lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 10 314 1.1E-142 T 28-03-2018 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243|KEGG: 00600+2.3.1.24 AM393_RS00660 d3d5805be0ece5c462861b296ad42522 324 PIRSF PIRSF026649 9 314 2.1E-96 T 28-03-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 AM393_RS04680 44d754b6a5fa9f849339b3187a18fe19 284 Gene3D G3DSA:1.10.3470.10 1 278 2.6E-25 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AM393_RS04680 44d754b6a5fa9f849339b3187a18fe19 284 Pfam PF00950 ABC 3 transport family 10 264 1.2E-74 T 28-03-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 AM393_RS04680 44d754b6a5fa9f849339b3187a18fe19 284 SUPERFAMILY SSF81345 4 261 3.27E-35 T 28-03-2018 IPR029022 ABC transporter, BtuC-like AM393_RS11285 e350b95a8abdb5805e0e2d553c848264 419 Gene3D G3DSA:2.40.50.140 49 116 6.0E-32 T 28-03-2018 AM393_RS11285 e350b95a8abdb5805e0e2d553c848264 419 SMART SM00382 170 355 5.0E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS11285 e350b95a8abdb5805e0e2d553c848264 419 SUPERFAMILY SSF50249 48 125 9.0E-30 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM393_RS11285 e350b95a8abdb5805e0e2d553c848264 419 Gene3D G3DSA:1.10.720.10 1 43 4.6E-13 T 28-03-2018 AM393_RS11285 e350b95a8abdb5805e0e2d553c848264 419 SUPERFAMILY SSF68912 1 46 5.49E-12 T 28-03-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 AM393_RS11285 e350b95a8abdb5805e0e2d553c848264 419 SMART SM00959 5 47 2.8E-17 T 28-03-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 AM393_RS11285 e350b95a8abdb5805e0e2d553c848264 419 Pfam PF07498 Rho termination factor, N-terminal domain 5 47 1.9E-16 T 28-03-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 AM393_RS11285 e350b95a8abdb5805e0e2d553c848264 419 SMART SM00357 52 118 9.6E-19 T 28-03-2018 IPR011129 Cold shock domain GO:0003676 AM393_RS11285 e350b95a8abdb5805e0e2d553c848264 419 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 419 251.853 T 28-03-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 AM393_RS11285 e350b95a8abdb5805e0e2d553c848264 419 Pfam PF07497 Rho termination factor, RNA-binding domain 52 125 2.7E-32 T 28-03-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 AM393_RS11285 e350b95a8abdb5805e0e2d553c848264 419 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 417 9.5E-223 T 28-03-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 AM393_RS11285 e350b95a8abdb5805e0e2d553c848264 419 Gene3D G3DSA:3.40.50.300 129 419 5.9E-58 T 28-03-2018 AM393_RS11285 e350b95a8abdb5805e0e2d553c848264 419 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 160 363 8.1E-23 T 28-03-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AM393_RS11285 e350b95a8abdb5805e0e2d553c848264 419 SUPERFAMILY SSF52540 90 371 1.22E-68 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS20980 0c56a2bcb69eb5cf18c4dbcfdf3d8ff5 216 Gene3D G3DSA:3.30.70.1560 120 202 1.6E-24 T 28-03-2018 AM393_RS20980 0c56a2bcb69eb5cf18c4dbcfdf3d8ff5 216 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 45 214 8.9E-58 T 28-03-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 AM393_RS20980 0c56a2bcb69eb5cf18c4dbcfdf3d8ff5 216 SUPERFAMILY SSF55120 40 213 1.44E-40 T 28-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM393_RS20980 0c56a2bcb69eb5cf18c4dbcfdf3d8ff5 216 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 76 90 - T 28-03-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 AM393_RS20980 0c56a2bcb69eb5cf18c4dbcfdf3d8ff5 216 Pfam PF00849 RNA pseudouridylate synthase 41 186 5.4E-13 T 28-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM393_RS20980 0c56a2bcb69eb5cf18c4dbcfdf3d8ff5 216 Gene3D G3DSA:3.30.70.580 34 119 2.5E-14 T 28-03-2018 AM393_RS05015 3b2790f4f204463badb4fdae35febb44 340 SMART SM00382 31 227 5.1E-18 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS05015 3b2790f4f204463badb4fdae35febb44 340 SUPERFAMILY SSF52540 1 237 9.98E-72 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS05015 3b2790f4f204463badb4fdae35febb44 340 Gene3D G3DSA:3.30.70.260 249 332 6.5E-10 T 28-03-2018 AM393_RS05015 3b2790f4f204463badb4fdae35febb44 340 Pfam PF00005 ABC transporter 22 170 4.0E-33 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS05015 3b2790f4f204463badb4fdae35febb44 340 Gene3D G3DSA:3.40.50.300 1 248 9.5E-73 T 28-03-2018 AM393_RS05015 3b2790f4f204463badb4fdae35febb44 340 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS06710 cbbe7e6f79d92ed1c10ec2d114b1f840 387 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 264 284 - T 28-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 AM393_RS06710 cbbe7e6f79d92ed1c10ec2d114b1f840 387 Pfam PF00465 Iron-containing alcohol dehydrogenase 9 359 1.0E-94 T 28-03-2018 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 AM393_RS06710 cbbe7e6f79d92ed1c10ec2d114b1f840 387 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 173 201 - T 28-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 AM393_RS06710 cbbe7e6f79d92ed1c10ec2d114b1f840 387 Gene3D G3DSA:1.20.1090.10 184 387 5.8E-43 T 28-03-2018 AM393_RS06710 cbbe7e6f79d92ed1c10ec2d114b1f840 387 SUPERFAMILY SSF56796 1 385 5.63E-109 T 28-03-2018 AM393_RS06710 cbbe7e6f79d92ed1c10ec2d114b1f840 387 Gene3D G3DSA:3.40.50.1970 9 183 1.8E-43 T 28-03-2018 AM393_RS08205 64578c72e4c6cb22f7602e5b7290d5e5 206 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 95 1.8E-32 T 28-03-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 AM393_RS08205 64578c72e4c6cb22f7602e5b7290d5e5 206 Pfam PF01479 S4 domain 97 143 1.0E-18 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AM393_RS08205 64578c72e4c6cb22f7602e5b7290d5e5 206 Gene3D G3DSA:3.10.290.10 101 145 9.4E-16 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AM393_RS08205 64578c72e4c6cb22f7602e5b7290d5e5 206 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 206 36.377 T 28-03-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 AM393_RS08205 64578c72e4c6cb22f7602e5b7290d5e5 206 ProSitePatterns PS00632 Ribosomal protein S4 signature. 94 118 - T 28-03-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM393_RS08205 64578c72e4c6cb22f7602e5b7290d5e5 206 SUPERFAMILY SSF55174 3 206 3.93E-73 T 28-03-2018 AM393_RS08205 64578c72e4c6cb22f7602e5b7290d5e5 206 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 206 3.3E-87 T 28-03-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 AM393_RS08205 64578c72e4c6cb22f7602e5b7290d5e5 206 Gene3D G3DSA:1.10.1050.10 1 100 2.1E-41 T 28-03-2018 AM393_RS08205 64578c72e4c6cb22f7602e5b7290d5e5 206 Gene3D G3DSA:1.10.1050.10 146 206 4.0E-18 T 28-03-2018 AM393_RS08205 64578c72e4c6cb22f7602e5b7290d5e5 206 SMART SM01390 3 95 1.2E-49 T 28-03-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 AM393_RS08205 64578c72e4c6cb22f7602e5b7290d5e5 206 SMART SM00363 96 160 8.7E-21 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AM393_RS02440 3e1af36064471c200b3d5edebaef5ddb 544 Hamap MF_00212 Probable malate:quinone oxidoreductase [mqo]. 24 514 52.745 T 28-03-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 AM393_RS02440 3e1af36064471c200b3d5edebaef5ddb 544 TIGRFAM TIGR01320 mal_quin_oxido: malate dehydrogenase (acceptor) 28 512 5.5E-209 T 28-03-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 AM393_RS02440 3e1af36064471c200b3d5edebaef5ddb 544 SUPERFAMILY SSF51905 19 87 5.61E-23 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS02440 3e1af36064471c200b3d5edebaef5ddb 544 SUPERFAMILY SSF51905 120 354 5.61E-23 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS02440 3e1af36064471c200b3d5edebaef5ddb 544 Gene3D G3DSA:3.50.50.60 20 481 3.2E-18 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS02440 3e1af36064471c200b3d5edebaef5ddb 544 Pfam PF06039 Malate:quinone oxidoreductase (Mqo) 27 514 1.8E-230 T 28-03-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 AM393_RS07360 ea993338d85d336c6733a63a4f8bece6 257 SMART SM00420 6 58 7.0E-19 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM393_RS07360 ea993338d85d336c6733a63a4f8bece6 257 SMART SM01134 78 238 1.6E-67 T 28-03-2018 AM393_RS07360 ea993338d85d336c6733a63a4f8bece6 257 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 28-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 AM393_RS07360 ea993338d85d336c6733a63a4f8bece6 257 SUPERFAMILY SSF100950 80 240 5.59E-35 T 28-03-2018 AM393_RS07360 ea993338d85d336c6733a63a4f8bece6 257 SUPERFAMILY SSF46785 5 62 6.41E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS07360 ea993338d85d336c6733a63a4f8bece6 257 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 4.2E-7 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM393_RS07360 ea993338d85d336c6733a63a4f8bece6 257 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 4.2E-7 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM393_RS07360 ea993338d85d336c6733a63a4f8bece6 257 Pfam PF00455 DeoR C terminal sensor domain 82 236 1.9E-50 T 28-03-2018 IPR014036 DeoR C-terminal sensor domain AM393_RS07360 ea993338d85d336c6733a63a4f8bece6 257 Pfam PF08220 DeoR-like helix-turn-helix domain 6 58 7.2E-17 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM393_RS07360 ea993338d85d336c6733a63a4f8bece6 257 Gene3D G3DSA:3.40.50.1360 70 236 5.3E-42 T 28-03-2018 AM393_RS07360 ea993338d85d336c6733a63a4f8bece6 257 Gene3D G3DSA:1.10.10.10 1 58 5.4E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS05540 6e807c159ef4d4be9e2c7badc44f0c9b 477 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 28 329 1.9E-105 T 28-03-2018 IPR013148 Glycosyl hydrolase family 32, N-terminal AM393_RS05540 6e807c159ef4d4be9e2c7badc44f0c9b 477 SMART SM00640 28 440 1.4E-141 T 28-03-2018 IPR001362 Glycoside hydrolase, family 32 GO:0004553|GO:0005975 AM393_RS05540 6e807c159ef4d4be9e2c7badc44f0c9b 477 Pfam PF08244 Glycosyl hydrolases family 32 C terminal 349 474 6.1E-22 T 28-03-2018 IPR013189 Glycosyl hydrolase family 32, C-terminal AM393_RS05540 6e807c159ef4d4be9e2c7badc44f0c9b 477 Gene3D G3DSA:2.60.120.560 356 477 3.9E-24 T 28-03-2018 AM393_RS05540 6e807c159ef4d4be9e2c7badc44f0c9b 477 TIGRFAM TIGR01322 scrB_fam: sucrose-6-phosphate hydrolase 13 451 1.4E-139 T 28-03-2018 IPR006232 Sucrose-6-phosphate hydrolase GO:0004564|GO:0005737|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 AM393_RS05540 6e807c159ef4d4be9e2c7badc44f0c9b 477 SUPERFAMILY SSF49899 329 477 2.14E-29 T 28-03-2018 IPR013320 Concanavalin A-like lectin/glucanase domain AM393_RS05540 6e807c159ef4d4be9e2c7badc44f0c9b 477 Gene3D G3DSA:2.115.10.20 33 355 1.1E-108 T 28-03-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain AM393_RS05540 6e807c159ef4d4be9e2c7badc44f0c9b 477 SUPERFAMILY SSF75005 20 329 2.04E-112 T 28-03-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain AM393_RS17415 6e30e505e9c99a2f252bef925a417f17 307 Gene3D G3DSA:3.40.50.2300 25 131 9.4E-23 T 28-03-2018 AM393_RS17415 6e30e505e9c99a2f252bef925a417f17 307 SUPERFAMILY SSF53822 23 301 5.15E-87 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AM393_RS17415 6e30e505e9c99a2f252bef925a417f17 307 Pfam PF13407 Periplasmic binding protein domain 27 281 3.9E-61 T 28-03-2018 IPR025997 Periplasmic binding protein AM393_RS17415 6e30e505e9c99a2f252bef925a417f17 307 Gene3D G3DSA:3.40.50.2300 132 307 1.4E-48 T 28-03-2018 AM393_RS02970 aa6794ff0b7d6123e300b24fba32f016 302 Gene3D G3DSA:3.40.190.10 176 260 7.2E-20 T 28-03-2018 AM393_RS02970 aa6794ff0b7d6123e300b24fba32f016 302 SUPERFAMILY SSF53850 90 290 2.96E-45 T 28-03-2018 AM393_RS02970 aa6794ff0b7d6123e300b24fba32f016 302 Gene3D G3DSA:3.40.190.10 92 175 1.7E-25 T 28-03-2018 AM393_RS02970 aa6794ff0b7d6123e300b24fba32f016 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 9.8E-25 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS02970 aa6794ff0b7d6123e300b24fba32f016 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 5.2E-10 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS02970 aa6794ff0b7d6123e300b24fba32f016 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 5.2E-10 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS02970 aa6794ff0b7d6123e300b24fba32f016 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 5.2E-10 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS02970 aa6794ff0b7d6123e300b24fba32f016 302 Pfam PF03466 LysR substrate binding domain 89 289 5.9E-48 T 28-03-2018 IPR005119 LysR, substrate-binding AM393_RS02970 aa6794ff0b7d6123e300b24fba32f016 302 SUPERFAMILY SSF46785 3 110 7.55E-26 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS02970 aa6794ff0b7d6123e300b24fba32f016 302 Gene3D G3DSA:1.10.10.10 1 91 1.5E-26 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS17350 e67a2844388bb795d0fde3a5759310e7 90 Pfam PF07338 Protein of unknown function (DUF1471) 33 90 1.5E-20 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 AM393_RS17350 e67a2844388bb795d0fde3a5759310e7 90 Gene3D G3DSA:3.30.1660.10 19 90 1.8E-22 T 28-03-2018 IPR025543 Dodecin-like AM393_RS17350 e67a2844388bb795d0fde3a5759310e7 90 SUPERFAMILY SSF159871 2 90 6.02E-25 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 AM393_RS00495 2f378e8c8048cf0f731295ab1680835d 682 Gene3D G3DSA:3.30.750.44 156 245 1.6E-21 T 28-03-2018 AM393_RS00495 2f378e8c8048cf0f731295ab1680835d 682 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 194 551 6.5E-127 T 28-03-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 AM393_RS00495 2f378e8c8048cf0f731295ab1680835d 682 Pfam PF03572 Peptidase family S41 356 528 3.0E-52 T 28-03-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 AM393_RS00495 2f378e8c8048cf0f731295ab1680835d 682 Pfam PF11818 C-terminal domain of tail specific protease (DUF3340) 537 667 4.0E-42 T 28-03-2018 IPR020992 Tail specific protease, C-terminal AM393_RS00495 2f378e8c8048cf0f731295ab1680835d 682 SMART SM00245 326 531 7.8E-77 T 28-03-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 AM393_RS00495 2f378e8c8048cf0f731295ab1680835d 682 SUPERFAMILY SSF50156 219 343 3.69E-16 T 28-03-2018 IPR001478 PDZ domain GO:0005515 AM393_RS00495 2f378e8c8048cf0f731295ab1680835d 682 SUPERFAMILY SSF52096 350 538 3.48E-68 T 28-03-2018 IPR029045 ClpP/crotonase-like domain AM393_RS00495 2f378e8c8048cf0f731295ab1680835d 682 SUPERFAMILY SSF52096 194 264 3.48E-68 T 28-03-2018 IPR029045 ClpP/crotonase-like domain AM393_RS00495 2f378e8c8048cf0f731295ab1680835d 682 SMART SM00228 246 323 3.5E-10 T 28-03-2018 IPR001478 PDZ domain GO:0005515 AM393_RS00495 2f378e8c8048cf0f731295ab1680835d 682 Gene3D G3DSA:3.90.226.10 330 594 7.2E-58 T 28-03-2018 AM393_RS00495 2f378e8c8048cf0f731295ab1680835d 682 Gene3D G3DSA:2.30.42.10 246 329 9.0E-15 T 28-03-2018 AM393_RS00495 2f378e8c8048cf0f731295ab1680835d 682 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 240 320 1.3E-14 T 28-03-2018 IPR001478 PDZ domain GO:0005515 AM393_RS15395 f459a3fb0b7708f9d5333ecc54b7caba 1160 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 292 735 6.0E-178 T 28-03-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM393_RS15395 f459a3fb0b7708f9d5333ecc54b7caba 1160 Gene3D G3DSA:1.10.150.280 780 894 1.2E-8 T 28-03-2018 AM393_RS15395 f459a3fb0b7708f9d5333ecc54b7caba 1160 SUPERFAMILY SSF89550 6 263 9.61E-15 T 28-03-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 AM393_RS15395 f459a3fb0b7708f9d5333ecc54b7caba 1160 Gene3D G3DSA:2.40.50.140 979 1074 4.8E-16 T 28-03-2018 AM393_RS15395 f459a3fb0b7708f9d5333ecc54b7caba 1160 SMART SM00481 7 74 2.7E-24 T 28-03-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal AM393_RS15395 f459a3fb0b7708f9d5333ecc54b7caba 1160 Pfam PF02811 PHP domain 8 171 8.0E-38 T 28-03-2018 IPR004013 PHP domain GO:0003824 AM393_RS15395 f459a3fb0b7708f9d5333ecc54b7caba 1160 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 6 1031 0.0 T 28-03-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM393_RS15395 f459a3fb0b7708f9d5333ecc54b7caba 1160 Gene3D G3DSA:3.20.20.140 1 246 1.3E-36 T 28-03-2018 AM393_RS15395 f459a3fb0b7708f9d5333ecc54b7caba 1160 Pfam PF01336 OB-fold nucleic acid binding domain 1000 1072 1.8E-8 T 28-03-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 AM393_RS15395 f459a3fb0b7708f9d5333ecc54b7caba 1160 Pfam PF14579 Helix-hairpin-helix motif 808 897 6.2E-25 T 28-03-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM393_RS07845 dc069db4e7163edcfe3c14dbd313801d 309 Gene3D G3DSA:3.40.190.10 174 260 1.5E-20 T 28-03-2018 AM393_RS07845 dc069db4e7163edcfe3c14dbd313801d 309 Pfam PF03466 LysR substrate binding domain 90 291 1.6E-41 T 28-03-2018 IPR005119 LysR, substrate-binding AM393_RS07845 dc069db4e7163edcfe3c14dbd313801d 309 Gene3D G3DSA:1.10.10.10 3 84 2.1E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS07845 dc069db4e7163edcfe3c14dbd313801d 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 7.3E-20 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS07845 dc069db4e7163edcfe3c14dbd313801d 309 Gene3D G3DSA:3.40.190.10 89 173 2.7E-15 T 28-03-2018 AM393_RS07845 dc069db4e7163edcfe3c14dbd313801d 309 SUPERFAMILY SSF53850 90 292 3.1E-42 T 28-03-2018 AM393_RS07845 dc069db4e7163edcfe3c14dbd313801d 309 SUPERFAMILY SSF46785 4 109 3.23E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS09795 4181cf83cf26ea2fecc18adef347d76c 91 SUPERFAMILY SSF63562 1 79 8.2E-25 T 28-03-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 AM393_RS09795 4181cf83cf26ea2fecc18adef347d76c 91 Gene3D G3DSA:3.90.940.10 1 91 5.9E-28 T 28-03-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 AM393_RS09795 4181cf83cf26ea2fecc18adef347d76c 91 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 60 1.7E-30 T 28-03-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM393_RS09795 4181cf83cf26ea2fecc18adef347d76c 91 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 62 16.321 T 28-03-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM393_RS09795 4181cf83cf26ea2fecc18adef347d76c 91 SMART SM01409 8 61 1.3E-15 T 28-03-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 AM393_RS09795 4181cf83cf26ea2fecc18adef347d76c 91 Pfam PF01192 RNA polymerase Rpb6 10 59 1.9E-15 T 28-03-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 AM393_RS09625 094c415814933bca3c9bcbb9237bdd3d 352 Gene3D G3DSA:3.40.50.2000 163 348 3.1E-44 T 28-03-2018 AM393_RS09625 094c415814933bca3c9bcbb9237bdd3d 352 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 69 324 4.7E-86 T 28-03-2018 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 AM393_RS09625 094c415814933bca3c9bcbb9237bdd3d 352 TIGRFAM TIGR02195 heptsyl_trn_II: lipopolysaccharide heptosyltransferase II 2 343 1.9E-167 T 28-03-2018 IPR011910 ADP-heptose--LPS heptosyltransferase 2 GO:0009103|GO:0016757 AM393_RS09625 094c415814933bca3c9bcbb9237bdd3d 352 SUPERFAMILY SSF53756 1 345 3.39E-101 T 28-03-2018 AM393_RS09625 094c415814933bca3c9bcbb9237bdd3d 352 Gene3D G3DSA:3.40.50.2000 1 147 2.5E-33 T 28-03-2018 AM393_RS11480 45d292c61ba4b19fc4dd0d8a7439682b 330 Pfam PF12146 Serine aminopeptidase, S33 52 312 3.2E-56 T 28-03-2018 IPR022742 Serine aminopeptidase, S33 AM393_RS11480 45d292c61ba4b19fc4dd0d8a7439682b 330 SUPERFAMILY SSF53474 17 329 2.32E-31 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AM393_RS11480 45d292c61ba4b19fc4dd0d8a7439682b 330 Gene3D G3DSA:3.40.50.1820 17 330 2.1E-28 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AM393_RS05265 3704fa542cd86912c9c31f9eecd2a4a2 610 Pfam PF08841 Diol dehydratase reactivase ATPase-like domain 275 602 3.5E-161 T 28-03-2018 IPR030994 Diol dehydratase reactivase ATPase-like domain AM393_RS05265 3704fa542cd86912c9c31f9eecd2a4a2 610 Gene3D G3DSA:2.40.50.140 466 509 4.3E-24 T 28-03-2018 AM393_RS05265 3704fa542cd86912c9c31f9eecd2a4a2 610 TIGRFAM TIGR04491 reactive_PduG: diol dehydratase reactivase alpha subunit 3 601 4.4E-289 T 28-03-2018 IPR009191 Diol dehydratase-reactivating factor alpha subunit AM393_RS05265 3704fa542cd86912c9c31f9eecd2a4a2 610 SUPERFAMILY SSF53067 407 600 2.66E-33 T 28-03-2018 AM393_RS05265 3704fa542cd86912c9c31f9eecd2a4a2 610 Gene3D G3DSA:3.50.30.70 108 247 3.6E-68 T 28-03-2018 IPR028975 Diol dehydratase-reactivating factor, alpha subunit, swiveling domain AM393_RS05265 3704fa542cd86912c9c31f9eecd2a4a2 610 Gene3D G3DSA:3.30.420.40 1 107 8.6E-16 T 28-03-2018 AM393_RS05265 3704fa542cd86912c9c31f9eecd2a4a2 610 Gene3D G3DSA:3.30.420.40 310 410 0.048 T 28-03-2018 AM393_RS05265 3704fa542cd86912c9c31f9eecd2a4a2 610 Gene3D G3DSA:3.30.420.40 514 610 8.2E-16 T 28-03-2018 AM393_RS05265 3704fa542cd86912c9c31f9eecd2a4a2 610 SUPERFAMILY SSF53067 251 403 1.55E-39 T 28-03-2018 AM393_RS05265 3704fa542cd86912c9c31f9eecd2a4a2 610 SUPERFAMILY SSF82317 93 254 1.44E-67 T 28-03-2018 IPR028975 Diol dehydratase-reactivating factor, alpha subunit, swiveling domain AM393_RS05265 3704fa542cd86912c9c31f9eecd2a4a2 610 PIRSF PIRSF011502 1 608 0.0 T 28-03-2018 IPR009191 Diol dehydratase-reactivating factor alpha subunit AM393_RS18795 d15a7423f0080de0c725960dc33bfc79 347 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 27 341 4.1E-122 T 28-03-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 AM393_RS18795 d15a7423f0080de0c725960dc33bfc79 347 Gene3D G3DSA:3.40.50.10800 210 323 2.0E-31 T 28-03-2018 AM393_RS18795 d15a7423f0080de0c725960dc33bfc79 347 Hamap MF_00567 Quinolinate synthase A [nadA]. 1 347 70.579 T 28-03-2018 IPR023513 Quinolinate synthase A, type 1 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342 AM393_RS18795 d15a7423f0080de0c725960dc33bfc79 347 Pfam PF02445 Quinolinate synthetase A protein 31 340 2.3E-102 T 28-03-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 AM393_RS18795 d15a7423f0080de0c725960dc33bfc79 347 SUPERFAMILY SSF142754 29 341 2.35E-106 T 28-03-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 AM393_RS18795 d15a7423f0080de0c725960dc33bfc79 347 Gene3D G3DSA:3.40.50.10800 25 110 8.3E-18 T 28-03-2018 AM393_RS18795 d15a7423f0080de0c725960dc33bfc79 347 Gene3D G3DSA:3.40.50.10800 118 209 9.4E-19 T 28-03-2018 AM393_RS08380 16f98769bcb5c84b86b6793b0b0897a1 119 TIGRFAM TIGR03010 sulf_tusC_dsrF: sulfur relay protein TusC/DsrF 4 119 1.6E-43 T 28-03-2018 IPR017462 Sulphur relay, TusC/DsrF AM393_RS08380 16f98769bcb5c84b86b6793b0b0897a1 119 SUPERFAMILY SSF75169 1 119 1.3E-33 T 28-03-2018 IPR027396 DsrEFH-like AM393_RS08380 16f98769bcb5c84b86b6793b0b0897a1 119 Hamap MF_00389 Protein TusC [tusC]. 1 119 34.121 T 28-03-2018 IPR017462 Sulphur relay, TusC/DsrF AM393_RS08380 16f98769bcb5c84b86b6793b0b0897a1 119 Pfam PF02635 DsrE/DsrF-like family 2 119 1.5E-22 T 28-03-2018 IPR003787 Sulphur relay, DsrE/F-like protein AM393_RS08380 16f98769bcb5c84b86b6793b0b0897a1 119 Gene3D G3DSA:3.40.1260.10 1 119 3.7E-19 T 28-03-2018 AM393_RS04265 1286a58de1509c26ab25998c29d74517 143 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 31 77 2.4E-13 T 28-03-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AM393_RS04265 1286a58de1509c26ab25998c29d74517 143 Pfam PF02627 Carboxymuconolactone decarboxylase family 21 94 4.8E-19 T 28-03-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AM393_RS04265 1286a58de1509c26ab25998c29d74517 143 SUPERFAMILY SSF69118 11 142 4.21E-40 T 28-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AM393_RS04265 1286a58de1509c26ab25998c29d74517 143 Gene3D G3DSA:1.20.1290.10 1 143 1.8E-35 T 28-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AM393_RS15110 18d2bcc8ca093c313a62ca3607c92421 464 Gene3D G3DSA:1.10.3090.10 191 434 4.0E-44 T 28-03-2018 AM393_RS15110 18d2bcc8ca093c313a62ca3607c92421 464 Pfam PF12626 Polymerase A arginine-rich C-terminus 338 456 6.2E-42 T 28-03-2018 IPR025866 Polymerase A arginine-rich C-terminal domain AM393_RS15110 18d2bcc8ca093c313a62ca3607c92421 464 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 220 280 2.1E-19 T 28-03-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 AM393_RS15110 18d2bcc8ca093c313a62ca3607c92421 464 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 31 458 3.0E-156 T 28-03-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 AM393_RS15110 18d2bcc8ca093c313a62ca3607c92421 464 SUPERFAMILY SSF81891 191 428 1.44E-51 T 28-03-2018 AM393_RS15110 18d2bcc8ca093c313a62ca3607c92421 464 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 25 460 38.72 T 28-03-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 AM393_RS15110 18d2bcc8ca093c313a62ca3607c92421 464 Pfam PF01743 Poly A polymerase head domain 63 193 9.1E-39 T 28-03-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 AM393_RS15110 18d2bcc8ca093c313a62ca3607c92421 464 SUPERFAMILY SSF81301 34 189 2.62E-39 T 28-03-2018 AM393_RS15110 18d2bcc8ca093c313a62ca3607c92421 464 Gene3D G3DSA:3.30.460.10 28 190 2.9E-52 T 28-03-2018 AM393_RS26440 24cc3bca92b4851d21f641ad54d43302 348 Gene3D G3DSA:3.20.20.70 7 348 1.4E-120 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM393_RS26440 24cc3bca92b4851d21f641ad54d43302 348 SUPERFAMILY SSF51569 7 345 9.16E-130 T 28-03-2018 AM393_RS26440 24cc3bca92b4851d21f641ad54d43302 348 PIRSF PIRSF001361 1 348 1.4E-155 T 28-03-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 AM393_RS26440 24cc3bca92b4851d21f641ad54d43302 348 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 5 347 7.9E-169 T 28-03-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 AM393_RS26440 24cc3bca92b4851d21f641ad54d43302 348 Pfam PF00793 DAHP synthetase I family 39 337 1.0E-104 T 28-03-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AM393_RS11695 13f166d19d7115b38b65f53590065065 234 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 28-03-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM393_RS11695 13f166d19d7115b38b65f53590065065 234 Pfam PF00687 Ribosomal protein L1p/L10e family 30 219 9.3E-53 T 28-03-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein AM393_RS11695 13f166d19d7115b38b65f53590065065 234 PIRSF PIRSF002155 1 227 6.7E-79 T 28-03-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM393_RS11695 13f166d19d7115b38b65f53590065065 234 Gene3D G3DSA:3.30.190.20 150 228 1.2E-21 T 28-03-2018 AM393_RS11695 13f166d19d7115b38b65f53590065065 234 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 227 8.1E-108 T 28-03-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 AM393_RS11695 13f166d19d7115b38b65f53590065065 234 SUPERFAMILY SSF56808 6 225 2.35E-83 T 28-03-2018 IPR023674 Ribosomal protein L1-like AM393_RS11695 13f166d19d7115b38b65f53590065065 234 Gene3D G3DSA:3.40.50.790 68 149 4.0E-35 T 28-03-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich AM393_RS11695 13f166d19d7115b38b65f53590065065 234 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 43.585 T 28-03-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 AM393_RS18540 b08ee023f9ca42db78a6534fa13d527e 257 Pfam PF12697 Alpha/beta hydrolase family 19 246 2.4E-18 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM393_RS18540 b08ee023f9ca42db78a6534fa13d527e 257 SUPERFAMILY SSF53474 12 252 5.63E-49 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AM393_RS18540 b08ee023f9ca42db78a6534fa13d527e 257 Gene3D G3DSA:3.40.50.1820 1 254 1.1E-53 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AM393_RS05370 5cc8d3fac7cdcb052c32e8e34fff6666 1178 SUPERFAMILY SSF52980 896 1171 6.97E-92 T 28-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AM393_RS05370 5cc8d3fac7cdcb052c32e8e34fff6666 1178 TIGRFAM TIGR00609 recB: exodeoxyribonuclease V, beta subunit 8 1169 0.0 T 28-03-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 AM393_RS05370 5cc8d3fac7cdcb052c32e8e34fff6666 1178 SUPERFAMILY SSF52540 325 826 3.23E-109 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS05370 5cc8d3fac7cdcb052c32e8e34fff6666 1178 SUPERFAMILY SSF52540 118 202 3.23E-109 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS05370 5cc8d3fac7cdcb052c32e8e34fff6666 1178 SUPERFAMILY SSF52540 19 80 3.23E-109 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS05370 5cc8d3fac7cdcb052c32e8e34fff6666 1178 Pfam PF13361 UvrD-like helicase C-terminal domain 550 809 7.7E-17 T 28-03-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 AM393_RS05370 5cc8d3fac7cdcb052c32e8e34fff6666 1178 Hamap MF_01485 RecBCD enzyme subunit RecB [recB]. 6 1170 23.168 T 28-03-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 AM393_RS05370 5cc8d3fac7cdcb052c32e8e34fff6666 1178 Gene3D G3DSA:3.40.50.300 594 877 1.7E-26 T 28-03-2018 AM393_RS05370 5cc8d3fac7cdcb052c32e8e34fff6666 1178 Gene3D G3DSA:3.40.50.300 444 590 2.7E-18 T 28-03-2018 AM393_RS05370 5cc8d3fac7cdcb052c32e8e34fff6666 1178 Gene3D G3DSA:3.90.320.10 886 1177 7.5E-88 T 28-03-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal GO:0003677|GO:0004518 AM393_RS05370 5cc8d3fac7cdcb052c32e8e34fff6666 1178 Pfam PF00580 UvrD/REP helicase N-terminal domain 15 436 1.4E-61 T 28-03-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 AM393_RS05370 5cc8d3fac7cdcb052c32e8e34fff6666 1178 Pfam PF12705 PD-(D/E)XK nuclease superfamily 949 1140 8.7E-5 T 28-03-2018 AM393_RS05370 5cc8d3fac7cdcb052c32e8e34fff6666 1178 Gene3D G3DSA:1.10.3170.10 155 349 2.3E-59 T 28-03-2018 AM393_RS17845 3be033f5c472675e3d421c179f8bd308 278 SUPERFAMILY SSF52540 5 238 9.32E-53 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS17845 3be033f5c472675e3d421c179f8bd308 278 Gene3D G3DSA:3.40.50.300 3 274 4.2E-57 T 28-03-2018 AM393_RS17845 3be033f5c472675e3d421c179f8bd308 278 Pfam PF00005 ABC transporter 22 177 3.1E-22 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS17845 3be033f5c472675e3d421c179f8bd308 278 SMART SM00382 29 226 1.1E-13 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS16340 66118308a3186d69fa572786c3dfb4b1 80 Pfam PF02609 Exonuclease VII small subunit 11 62 2.1E-21 T 28-03-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AM393_RS16340 66118308a3186d69fa572786c3dfb4b1 80 Gene3D G3DSA:1.10.287.1040 8 75 1.0E-26 T 28-03-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AM393_RS16340 66118308a3186d69fa572786c3dfb4b1 80 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 10 70 16.726 T 28-03-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AM393_RS16340 66118308a3186d69fa572786c3dfb4b1 80 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 10 65 2.4E-24 T 28-03-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AM393_RS16340 66118308a3186d69fa572786c3dfb4b1 80 SUPERFAMILY SSF116842 3 74 1.83E-22 T 28-03-2018 AM393_RS16340 66118308a3186d69fa572786c3dfb4b1 80 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 1 50 4.0E-19 T 28-03-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AM393_RS16340 66118308a3186d69fa572786c3dfb4b1 80 PIRSF PIRSF006488 1 80 4.1E-25 T 28-03-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AM393_RS12100 42a68a19e2b9359fc294e57841a1cb2e 327 Pfam PF00107 Zinc-binding dehydrogenase 152 259 5.8E-30 T 28-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AM393_RS12100 42a68a19e2b9359fc294e57841a1cb2e 327 SMART SM00829 11 325 1.2E-29 T 28-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AM393_RS12100 42a68a19e2b9359fc294e57841a1cb2e 327 SUPERFAMILY SSF50129 10 142 1.49E-32 T 28-03-2018 IPR011032 GroES-like AM393_RS12100 42a68a19e2b9359fc294e57841a1cb2e 327 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 141 162 - T 28-03-2018 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 AM393_RS12100 42a68a19e2b9359fc294e57841a1cb2e 327 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 88 3.4E-10 T 28-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AM393_RS12100 42a68a19e2b9359fc294e57841a1cb2e 327 SUPERFAMILY SSF51735 113 275 7.32E-49 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS12100 42a68a19e2b9359fc294e57841a1cb2e 327 Gene3D G3DSA:3.90.180.10 1 142 5.3E-36 T 28-03-2018 AM393_RS12100 42a68a19e2b9359fc294e57841a1cb2e 327 Gene3D G3DSA:3.90.180.10 257 326 0.052 T 28-03-2018 AM393_RS12100 42a68a19e2b9359fc294e57841a1cb2e 327 Gene3D G3DSA:3.40.50.720 143 256 5.7E-22 T 28-03-2018 AM393_RS12905 10603b44a5d58e12c4d10e89dfb29319 284 Gene3D G3DSA:3.20.20.150 1 284 1.0E-62 T 28-03-2018 AM393_RS12905 10603b44a5d58e12c4d10e89dfb29319 284 SUPERFAMILY SSF51658 21 278 4.98E-56 T 28-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AM393_RS12905 10603b44a5d58e12c4d10e89dfb29319 284 TIGRFAM TIGR00542 hxl6Piso_put: putative hexulose-6-phosphate isomerase 5 281 4.3E-149 T 28-03-2018 IPR004560 L-ribulose-5-phosphate 3-epimerase GO:0005975|GO:0016861 KEGG: 00053+5.1.3.22|MetaCyc: PWY-6961 AM393_RS12905 10603b44a5d58e12c4d10e89dfb29319 284 Pfam PF01261 Xylose isomerase-like TIM barrel 25 230 1.1E-34 T 28-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AM393_RS18990 d464bc17d5d85eacde3b4f072a1358a8 346 SMART SM00876 220 312 1.5E-48 T 28-03-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AM393_RS18990 d464bc17d5d85eacde3b4f072a1358a8 346 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 220 310 2.2E-20 T 28-03-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AM393_RS18990 d464bc17d5d85eacde3b4f072a1358a8 346 PIRSF PIRSF001619 1 319 2.4E-140 T 28-03-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AM393_RS18990 d464bc17d5d85eacde3b4f072a1358a8 346 TIGRFAM TIGR00433 bioB: biotin synthase 14 310 1.3E-124 T 28-03-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AM393_RS18990 d464bc17d5d85eacde3b4f072a1358a8 346 Gene3D G3DSA:3.20.20.70 4 315 8.0E-61 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM393_RS18990 d464bc17d5d85eacde3b4f072a1358a8 346 Hamap MF_01694 Biotin synthase [bioB]. 5 313 41.907 T 28-03-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AM393_RS18990 d464bc17d5d85eacde3b4f072a1358a8 346 SUPERFAMILY SSF102114 6 313 2.22E-94 T 28-03-2018 AM393_RS18990 d464bc17d5d85eacde3b4f072a1358a8 346 Pfam PF04055 Radical SAM superfamily 50 202 4.4E-18 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AM393_RS18990 d464bc17d5d85eacde3b4f072a1358a8 346 SMART SM00729 43 255 1.9E-43 T 28-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AM393_RS01515 44b5e9c64a2d20acb33cfe8cce08a824 304 Gene3D G3DSA:1.10.10.10 8 89 5.3E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS01515 44b5e9c64a2d20acb33cfe8cce08a824 304 Pfam PF03466 LysR substrate binding domain 96 293 9.5E-31 T 28-03-2018 IPR005119 LysR, substrate-binding AM393_RS01515 44b5e9c64a2d20acb33cfe8cce08a824 304 SUPERFAMILY SSF53850 96 295 2.17E-32 T 28-03-2018 AM393_RS01515 44b5e9c64a2d20acb33cfe8cce08a824 304 Gene3D G3DSA:3.40.190.10 179 265 4.9E-16 T 28-03-2018 AM393_RS01515 44b5e9c64a2d20acb33cfe8cce08a824 304 Gene3D G3DSA:3.40.190.10 95 178 7.0E-15 T 28-03-2018 AM393_RS01515 44b5e9c64a2d20acb33cfe8cce08a824 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 68 2.5E-18 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS01515 44b5e9c64a2d20acb33cfe8cce08a824 304 SUPERFAMILY SSF46785 7 115 6.9E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS20075 151385c516c14ab99b86bcec040a5d06 396 Gene3D G3DSA:3.90.1150.10 1 76 1.7E-20 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM393_RS20075 151385c516c14ab99b86bcec040a5d06 396 Pfam PF00155 Aminotransferase class I and II 27 392 2.1E-93 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AM393_RS20075 151385c516c14ab99b86bcec040a5d06 396 SUPERFAMILY SSF53383 1 396 1.17E-115 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM393_RS20075 151385c516c14ab99b86bcec040a5d06 396 PRINTS PR00799 Aspartate aminotransferase signature 175 194 1.6E-39 T 28-03-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AM393_RS20075 151385c516c14ab99b86bcec040a5d06 396 PRINTS PR00799 Aspartate aminotransferase signature 341 359 1.6E-39 T 28-03-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AM393_RS20075 151385c516c14ab99b86bcec040a5d06 396 PRINTS PR00799 Aspartate aminotransferase signature 273 298 1.6E-39 T 28-03-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AM393_RS20075 151385c516c14ab99b86bcec040a5d06 396 PRINTS PR00799 Aspartate aminotransferase signature 206 218 1.6E-39 T 28-03-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AM393_RS20075 151385c516c14ab99b86bcec040a5d06 396 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 243 256 - T 28-03-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 AM393_RS20075 151385c516c14ab99b86bcec040a5d06 396 Gene3D G3DSA:3.40.640.10 77 299 3.6E-32 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM393_RS20075 151385c516c14ab99b86bcec040a5d06 396 Gene3D G3DSA:3.90.1150.10 300 396 4.6E-27 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM393_RS24590 8b6655a31c4d74c79f5c97466f229782 353 SUPERFAMILY SSF52540 56 186 1.36E-12 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS24590 8b6655a31c4d74c79f5c97466f229782 353 Pfam PF03969 AFG1-like ATPase 57 349 3.0E-86 T 28-03-2018 IPR005654 ATPase, AFG1-like GO:0005524 AM393_RS24590 8b6655a31c4d74c79f5c97466f229782 353 Gene3D G3DSA:3.40.50.300 38 184 9.6E-12 T 28-03-2018 AM393_RS16305 726e62e250bbd136faca4fd18d794103 156 SUPERFAMILY SSF52121 4 154 7.85E-59 T 28-03-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AM393_RS16305 726e62e250bbd136faca4fd18d794103 156 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 14 150 3.3E-60 T 28-03-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AM393_RS16305 726e62e250bbd136faca4fd18d794103 156 Gene3D G3DSA:3.40.50.960 1 155 1.2E-64 T 28-03-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AM393_RS16305 726e62e250bbd136faca4fd18d794103 156 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 8 154 31.65 T 28-03-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AM393_RS16305 726e62e250bbd136faca4fd18d794103 156 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 13 151 1.4E-55 T 28-03-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AM393_RS24110 04f0a99240ff33f27229c21710e42080 340 Gene3D G3DSA:3.40.50.2300 183 314 1.1E-43 T 28-03-2018 AM393_RS24110 04f0a99240ff33f27229c21710e42080 340 Pfam PF00356 Bacterial regulatory proteins, lacI family 12 56 5.2E-11 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM393_RS24110 04f0a99240ff33f27229c21710e42080 340 Gene3D G3DSA:3.40.50.2300 64 182 2.8E-34 T 28-03-2018 AM393_RS24110 04f0a99240ff33f27229c21710e42080 340 SMART SM00354 9 79 2.0E-20 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM393_RS24110 04f0a99240ff33f27229c21710e42080 340 SUPERFAMILY SSF47413 8 67 1.21E-12 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM393_RS24110 04f0a99240ff33f27229c21710e42080 340 SUPERFAMILY SSF53822 69 338 5.57E-77 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AM393_RS24110 04f0a99240ff33f27229c21710e42080 340 Gene3D G3DSA:1.10.260.40 10 63 2.1E-14 T 28-03-2018 AM393_RS24110 04f0a99240ff33f27229c21710e42080 340 Pfam PF13377 Periplasmic binding protein-like domain 176 336 4.1E-38 T 28-03-2018 AM393_RS15335 894a16ae05c199401d4f4d61dcbf4b80 400 Pfam PF13288 DXP reductoisomerase C-terminal domain 271 387 1.8E-39 T 28-03-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 AM393_RS15335 894a16ae05c199401d4f4d61dcbf4b80 400 PIRSF PIRSF006205 1 399 7.4E-157 T 28-03-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 AM393_RS15335 894a16ae05c199401d4f4d61dcbf4b80 400 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 146 239 3.7E-36 T 28-03-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 AM393_RS15335 894a16ae05c199401d4f4d61dcbf4b80 400 SUPERFAMILY SSF51735 2 150 7.38E-48 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS15335 894a16ae05c199401d4f4d61dcbf4b80 400 SUPERFAMILY SSF55347 126 274 3.6E-62 T 28-03-2018 AM393_RS15335 894a16ae05c199401d4f4d61dcbf4b80 400 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 132 1.2E-48 T 28-03-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 AM393_RS15335 894a16ae05c199401d4f4d61dcbf4b80 400 SUPERFAMILY SSF69055 301 395 1.7E-30 T 28-03-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 AM393_RS15335 894a16ae05c199401d4f4d61dcbf4b80 400 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1 397 2.4E-182 T 28-03-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 AM393_RS15335 894a16ae05c199401d4f4d61dcbf4b80 400 Gene3D G3DSA:1.10.1740.10 312 396 7.8E-29 T 28-03-2018 AM393_RS15335 894a16ae05c199401d4f4d61dcbf4b80 400 Gene3D G3DSA:3.40.50.720 1 150 1.2E-53 T 28-03-2018 AM393_RS15335 894a16ae05c199401d4f4d61dcbf4b80 400 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 4 392 46.955 T 28-03-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 AM393_RS16700 5717a453dd6b676820028b3b9ded9095 1048 Gene3D G3DSA:3.30.2090.10 180 275 1.4E-17 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM393_RS16700 5717a453dd6b676820028b3b9ded9095 1048 Gene3D G3DSA:1.20.1640.10 828 1032 5.0E-38 T 28-03-2018 AM393_RS16700 5717a453dd6b676820028b3b9ded9095 1048 Pfam PF00873 AcrB/AcrD/AcrF family 1 1029 0.0 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS16700 5717a453dd6b676820028b3b9ded9095 1048 PRINTS PR00702 Acriflavin resistance protein family signature 553 570 1.5E-114 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS16700 5717a453dd6b676820028b3b9ded9095 1048 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 1.5E-114 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS16700 5717a453dd6b676820028b3b9ded9095 1048 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 1.5E-114 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS16700 5717a453dd6b676820028b3b9ded9095 1048 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 1.5E-114 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS16700 5717a453dd6b676820028b3b9ded9095 1048 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 1.5E-114 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS16700 5717a453dd6b676820028b3b9ded9095 1048 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 1.5E-114 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS16700 5717a453dd6b676820028b3b9ded9095 1048 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 1.5E-114 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS16700 5717a453dd6b676820028b3b9ded9095 1048 PRINTS PR00702 Acriflavin resistance protein family signature 622 636 1.5E-114 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS16700 5717a453dd6b676820028b3b9ded9095 1048 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 1.5E-114 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS16700 5717a453dd6b676820028b3b9ded9095 1048 SUPERFAMILY SSF82866 296 497 4.58E-49 T 28-03-2018 AM393_RS16700 5717a453dd6b676820028b3b9ded9095 1048 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1048 0.0 T 28-03-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 AM393_RS16700 5717a453dd6b676820028b3b9ded9095 1048 SUPERFAMILY SSF82714 724 811 3.53E-22 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM393_RS16700 5717a453dd6b676820028b3b9ded9095 1048 SUPERFAMILY SSF82693 135 182 1.7E-27 T 28-03-2018 AM393_RS16700 5717a453dd6b676820028b3b9ded9095 1048 SUPERFAMILY SSF82693 274 330 1.7E-27 T 28-03-2018 AM393_RS16700 5717a453dd6b676820028b3b9ded9095 1048 SUPERFAMILY SSF82693 566 670 1.26E-33 T 28-03-2018 AM393_RS16700 5717a453dd6b676820028b3b9ded9095 1048 Gene3D G3DSA:3.30.70.1430 568 669 5.7E-20 T 28-03-2018 AM393_RS16700 5717a453dd6b676820028b3b9ded9095 1048 SUPERFAMILY SSF82714 182 271 2.88E-22 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM393_RS16700 5717a453dd6b676820028b3b9ded9095 1048 Gene3D G3DSA:3.30.70.1430 38 140 3.9E-29 T 28-03-2018 AM393_RS16700 5717a453dd6b676820028b3b9ded9095 1048 SUPERFAMILY SSF82866 808 1034 2.22E-45 T 28-03-2018 AM393_RS16700 5717a453dd6b676820028b3b9ded9095 1048 Gene3D G3DSA:1.20.1640.10 287 509 5.3E-44 T 28-03-2018 AM393_RS16700 5717a453dd6b676820028b3b9ded9095 1048 Gene3D G3DSA:3.30.70.1440 673 770 9.6E-20 T 28-03-2018 AM393_RS16700 5717a453dd6b676820028b3b9ded9095 1048 SUPERFAMILY SSF82693 38 133 6.98E-27 T 28-03-2018 AM393_RS09125 f82714a8120d3cec68a4152d143f7f95 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 4.7E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS09125 f82714a8120d3cec68a4152d143f7f95 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 4.7E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS09125 f82714a8120d3cec68a4152d143f7f95 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 4.7E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS09125 f82714a8120d3cec68a4152d143f7f95 299 Gene3D G3DSA:3.40.190.10 178 265 2.8E-23 T 28-03-2018 AM393_RS09125 f82714a8120d3cec68a4152d143f7f95 299 SUPERFAMILY SSF46785 4 84 1.53E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS09125 f82714a8120d3cec68a4152d143f7f95 299 Gene3D G3DSA:1.10.10.10 3 83 7.9E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS09125 f82714a8120d3cec68a4152d143f7f95 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 1.9E-19 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS09125 f82714a8120d3cec68a4152d143f7f95 299 SUPERFAMILY SSF53850 90 296 5.12E-47 T 28-03-2018 AM393_RS09125 f82714a8120d3cec68a4152d143f7f95 299 Gene3D G3DSA:3.40.190.10 89 177 6.9E-16 T 28-03-2018 AM393_RS09125 f82714a8120d3cec68a4152d143f7f95 299 Pfam PF03466 LysR substrate binding domain 89 291 3.1E-43 T 28-03-2018 IPR005119 LysR, substrate-binding AM393_RS16520 e581d6a2ef48766cde14847c32baff48 272 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 229 8.8E-46 T 28-03-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 AM393_RS16520 e581d6a2ef48766cde14847c32baff48 272 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 28-03-2018 AM393_RS16520 e581d6a2ef48766cde14847c32baff48 272 ProSitePatterns PS01229 Hypothetical cof family signature 2. 210 232 - T 28-03-2018 AM393_RS16520 e581d6a2ef48766cde14847c32baff48 272 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 258 2.3E-59 T 28-03-2018 IPR000150 Cof family GO:0016787 AM393_RS16520 e581d6a2ef48766cde14847c32baff48 272 SUPERFAMILY SSF56784 1 262 7.44E-62 T 28-03-2018 IPR023214 HAD-like domain AM393_RS16520 e581d6a2ef48766cde14847c32baff48 272 Gene3D G3DSA:3.40.50.1000 1 267 4.7E-31 T 28-03-2018 IPR023214 HAD-like domain AM393_RS16520 e581d6a2ef48766cde14847c32baff48 272 Hamap MF_01847 HMP-PP phosphatase [cof]. 1 272 62.37 T 28-03-2018 IPR023938 HMP-PP phosphatase GO:0016818 AM393_RS16520 e581d6a2ef48766cde14847c32baff48 272 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 258 2.5E-53 T 28-03-2018 IPR023214 HAD-like domain AM393_RS26145 68397c7aac07d834add39fa1497b2472 320 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 31 311 1.4E-61 T 28-03-2018 IPR010067 Aliphatic sulfonates-binding protein GO:0016020|GO:0042626 AM393_RS26145 68397c7aac07d834add39fa1497b2472 320 SMART SM00062 29 254 9.0E-4 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM393_RS26145 68397c7aac07d834add39fa1497b2472 320 Gene3D G3DSA:3.40.190.10 24 127 6.1E-14 T 28-03-2018 AM393_RS26145 68397c7aac07d834add39fa1497b2472 320 SUPERFAMILY SSF53850 28 243 3.63E-42 T 28-03-2018 AM393_RS26145 68397c7aac07d834add39fa1497b2472 320 Gene3D G3DSA:3.40.190.10 128 315 2.4E-30 T 28-03-2018 AM393_RS26145 68397c7aac07d834add39fa1497b2472 320 Pfam PF09084 NMT1/THI5 like 68 187 1.2E-15 T 28-03-2018 IPR015168 SsuA/THI5-like AM393_RS24745 cbbd49c7d6c9e8b2292835dd07b2fb1c 81 Pfam PF10820 Protein of unknown function (DUF2543) 1 81 1.2E-47 T 28-03-2018 IPR020251 Uncharacterised protein family, YmjA AM393_RS24745 cbbd49c7d6c9e8b2292835dd07b2fb1c 81 ProDom PD059807 YMJA ECS1872 1 81 2.0E-23 T 28-03-2018 IPR020251 Uncharacterised protein family, YmjA AM393_RS24745 cbbd49c7d6c9e8b2292835dd07b2fb1c 81 Gene3D G3DSA:1.10.1790.10 1 80 9.0E-4 T 28-03-2018 IPR011608 PRD domain GO:0006355 AM393_RS19815 576ba3a9f6becc32481d11af37983794 550 Gene3D G3DSA:1.20.1270.20 150 232 6.0E-21 T 28-03-2018 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 AM393_RS19815 576ba3a9f6becc32481d11af37983794 550 Pfam PF03063 Prismane/CO dehydrogenase family 1 545 2.9E-155 T 28-03-2018 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase GO:0016491|GO:0055114 KEGG: 00910+1.7.99.1 AM393_RS19815 576ba3a9f6becc32481d11af37983794 550 PIRSF PIRSF000076 1 550 6.7E-239 T 28-03-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 AM393_RS19815 576ba3a9f6becc32481d11af37983794 550 TIGRFAM TIGR01703 hybrid_clust: hydroxylamine reductase 1 548 5.3E-231 T 28-03-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 AM393_RS19815 576ba3a9f6becc32481d11af37983794 550 Gene3D G3DSA:1.20.1270.20 1 146 2.3E-35 T 28-03-2018 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 AM393_RS19815 576ba3a9f6becc32481d11af37983794 550 Hamap MF_00069 Hydroxylamine reductase [hcp]. 1 549 21.388 T 28-03-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 AM393_RS19815 576ba3a9f6becc32481d11af37983794 550 Gene3D G3DSA:3.40.50.2030 376 550 5.8E-59 T 28-03-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 AM393_RS19815 576ba3a9f6becc32481d11af37983794 550 SUPERFAMILY SSF56821 1 548 7.33E-189 T 28-03-2018 IPR011254 Prismane-like GO:0003824|GO:0016491|GO:0055114 AM393_RS19815 576ba3a9f6becc32481d11af37983794 550 Gene3D G3DSA:3.40.50.2030 235 375 2.0E-63 T 28-03-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 AM393_RS12985 3899f68b46e22fd4259692dffc4a8b40 647 Gene3D G3DSA:3.60.21.10 13 345 1.2E-77 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like AM393_RS12985 3899f68b46e22fd4259692dffc4a8b40 647 Pfam PF00149 Calcineurin-like phosphoesterase 24 259 2.8E-12 T 28-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AM393_RS12985 3899f68b46e22fd4259692dffc4a8b40 647 PRINTS PR01607 Apyrase family signature 530 549 2.6E-32 T 28-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM393_RS12985 3899f68b46e22fd4259692dffc4a8b40 647 PRINTS PR01607 Apyrase family signature 243 266 2.6E-32 T 28-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM393_RS12985 3899f68b46e22fd4259692dffc4a8b40 647 PRINTS PR01607 Apyrase family signature 283 303 2.6E-32 T 28-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM393_RS12985 3899f68b46e22fd4259692dffc4a8b40 647 PRINTS PR01607 Apyrase family signature 22 40 2.6E-32 T 28-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM393_RS12985 3899f68b46e22fd4259692dffc4a8b40 647 PRINTS PR01607 Apyrase family signature 215 232 2.6E-32 T 28-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM393_RS12985 3899f68b46e22fd4259692dffc4a8b40 647 PRINTS PR01607 Apyrase family signature 428 451 2.6E-32 T 28-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM393_RS12985 3899f68b46e22fd4259692dffc4a8b40 647 SUPERFAMILY SSF56300 19 353 4.34E-86 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like AM393_RS12985 3899f68b46e22fd4259692dffc4a8b40 647 Gene3D G3DSA:3.90.780.10 346 605 6.0E-50 T 28-03-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM393_RS12985 3899f68b46e22fd4259692dffc4a8b40 647 TIGRFAM TIGR01390 CycNucDiestase: 2',3'-cyclic-nucleotide 2'-phosphodiesterase 22 647 0.0 T 28-03-2018 IPR006294 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase GO:0008663|GO:0009117 KEGG: 00230+3.1.4.16+3.1.3.6|KEGG: 00240+3.1.4.16+3.1.3.6 AM393_RS12985 3899f68b46e22fd4259692dffc4a8b40 647 Pfam PF02872 5'-nucleotidase, C-terminal domain 355 550 2.1E-22 T 28-03-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM393_RS12985 3899f68b46e22fd4259692dffc4a8b40 647 ProSitePatterns PS00786 5'-nucleotidase signature 2. 109 120 - T 28-03-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM393_RS12985 3899f68b46e22fd4259692dffc4a8b40 647 ProSitePatterns PS00785 5'-nucleotidase signature 1. 24 36 - T 28-03-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM393_RS12985 3899f68b46e22fd4259692dffc4a8b40 647 SUPERFAMILY SSF55816 355 597 1.31E-38 T 28-03-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM393_RS19775 5abea6917e5c486137c6c6425fe51a19 276 SMART SM00644 32 178 3.3E-35 T 28-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 AM393_RS19775 5abea6917e5c486137c6c6425fe51a19 276 SUPERFAMILY SSF47090 198 273 1.1E-19 T 28-03-2018 IPR002477 Peptidoglycan binding-like AM393_RS19775 5abea6917e5c486137c6c6425fe51a19 276 Gene3D G3DSA:3.40.80.10 42 192 5.6E-42 T 28-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 AM393_RS19775 5abea6917e5c486137c6c6425fe51a19 276 Gene3D G3DSA:1.10.101.10 193 276 4.6E-8 T 28-03-2018 IPR002477 Peptidoglycan binding-like AM393_RS19775 5abea6917e5c486137c6c6425fe51a19 276 SUPERFAMILY SSF55846 23 194 2.88E-51 T 28-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 AM393_RS19775 5abea6917e5c486137c6c6425fe51a19 276 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 42 179 2.6E-25 T 28-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 AM393_RS14670 4294c14712bcac92d715364bbdc0e924 500 Pfam PF02610 L-arabinose isomerase 5 359 7.1E-179 T 28-03-2018 IPR003762 L-arabinose isomerase GO:0008152|GO:0008733 KEGG: 00040+5.3.1.4 AM393_RS14670 4294c14712bcac92d715364bbdc0e924 500 Hamap MF_00519 L-arabinose isomerase [araA]. 1 477 65.127 T 28-03-2018 IPR003762 L-arabinose isomerase GO:0008152|GO:0008733 KEGG: 00040+5.3.1.4 AM393_RS14670 4294c14712bcac92d715364bbdc0e924 500 Pfam PF11762 L-arabinose isomerase C-terminal domain 363 476 1.6E-46 T 28-03-2018 IPR024664 L-arabinose isomerase, C-terminal KEGG: 00040+5.3.1.4 AM393_RS14670 4294c14712bcac92d715364bbdc0e924 500 ProDom PD018364 ISOMERASE L-ARABINOSE ARABINOSE METABOLISM CARBOHYDRATE CATABOLISM ARAA 1 303 3.0E-173 T 28-03-2018 IPR003762 L-arabinose isomerase GO:0008152|GO:0008733 KEGG: 00040+5.3.1.4 AM393_RS14670 4294c14712bcac92d715364bbdc0e924 500 SUPERFAMILY SSF53743 1 326 2.88E-125 T 28-03-2018 IPR009015 L-fucose isomerase, N-terminal/central domain GO:0005737|GO:0005996|GO:0016861 AM393_RS14670 4294c14712bcac92d715364bbdc0e924 500 SUPERFAMILY SSF50443 329 496 3.4E-72 T 28-03-2018 IPR004216 L-fucose/L-arabinose isomerase, C-terminal AM393_RS14670 4294c14712bcac92d715364bbdc0e924 500 PIRSF PIRSF001478 1 500 5.5E-258 T 28-03-2018 IPR003762 L-arabinose isomerase GO:0008152|GO:0008733 KEGG: 00040+5.3.1.4 AM393_RS22275 feb85012ca1d0d4c6be80065b4646ae6 243 SUPERFAMILY SSF49899 63 227 4.75E-8 T 28-03-2018 IPR013320 Concanavalin A-like lectin/glucanase domain AM393_RS22275 feb85012ca1d0d4c6be80065b4646ae6 243 Gene3D G3DSA:2.60.120.200 14 236 1.1E-8 T 28-03-2018 AM393_RS22275 feb85012ca1d0d4c6be80065b4646ae6 243 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 112 225 1.8E-7 T 28-03-2018 AM393_RS20480 9a416e892915804255170fd311edf856 1320 Gene3D G3DSA:3.20.20.220 178 610 3.7E-111 T 28-03-2018 IPR029041 FAD-linked oxidoreductase-like AM393_RS20480 9a416e892915804255170fd311edf856 1320 Gene3D G3DSA:1.10.1220.10 2 49 8.7E-6 T 28-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 AM393_RS20480 9a416e892915804255170fd311edf856 1320 SUPERFAMILY SSF81935 88 261 2.48E-66 T 28-03-2018 IPR024089 Proline dehydrogenase PutA, domain I/II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 AM393_RS20480 9a416e892915804255170fd311edf856 1320 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 910 921 - T 28-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 AM393_RS20480 9a416e892915804255170fd311edf856 1320 Pfam PF14850 DNA-binding domain of Proline dehydrogenase 147 259 1.6E-46 T 28-03-2018 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 AM393_RS20480 9a416e892915804255170fd311edf856 1320 TIGRFAM TIGR01238 D1pyr5carbox3: delta-1-pyrroline-5-carboxylate dehydrogenase 610 1113 8.2E-280 T 28-03-2018 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 GO:0003842|GO:0006561|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 AM393_RS20480 9a416e892915804255170fd311edf856 1320 SUPERFAMILY SSF51730 262 618 3.92E-124 T 28-03-2018 IPR029041 FAD-linked oxidoreductase-like AM393_RS20480 9a416e892915804255170fd311edf856 1320 SUPERFAMILY SSF47598 3 45 1.78E-10 T 28-03-2018 IPR010985 Ribbon-helix-helix GO:0006355 AM393_RS20480 9a416e892915804255170fd311edf856 1320 Gene3D G3DSA:1.20.5.550 89 137 9.4E-20 T 28-03-2018 IPR024090 Proline dehydrogenase PutA, domain I GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 AM393_RS20480 9a416e892915804255170fd311edf856 1320 Pfam PF00171 Aldehyde dehydrogenase family 659 1106 2.8E-112 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AM393_RS20480 9a416e892915804255170fd311edf856 1320 PIRSF PIRSF000197 74 1320 0.0 T 28-03-2018 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 AM393_RS20480 9a416e892915804255170fd311edf856 1320 Gene3D G3DSA:3.40.309.10 902 1094 1.5E-45 T 28-03-2018 AM393_RS20480 9a416e892915804255170fd311edf856 1320 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 882 889 - T 28-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 AM393_RS20480 9a416e892915804255170fd311edf856 1320 Pfam PF01619 Proline dehydrogenase 270 569 4.0E-100 T 28-03-2018 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|Reactome: R-HSA-70688 AM393_RS20480 9a416e892915804255170fd311edf856 1320 Gene3D G3DSA:3.40.605.10 650 901 1.2E-71 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AM393_RS20480 9a416e892915804255170fd311edf856 1320 SUPERFAMILY SSF53720 656 1112 5.11E-125 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AM393_RS13275 6cd345d561dee7ed59951c3db2546569 140 Gene3D G3DSA:3.30.70.970 3 116 1.3E-42 T 28-03-2018 IPR009671 Regulator of ribonuclease activity B domain AM393_RS13275 6cd345d561dee7ed59951c3db2546569 140 Hamap MF_01888 Regulator of ribonuclease activity B [rraB]. 4 117 31.419 T 28-03-2018 IPR016716 Regulator of ribonuclease activity B AM393_RS13275 6cd345d561dee7ed59951c3db2546569 140 Pfam PF06877 Regulator of ribonuclease activity B 12 113 1.4E-34 T 28-03-2018 IPR009671 Regulator of ribonuclease activity B domain AM393_RS13275 6cd345d561dee7ed59951c3db2546569 140 PIRSF PIRSF018193 1 140 3.7E-67 T 28-03-2018 IPR016716 Regulator of ribonuclease activity B AM393_RS13275 6cd345d561dee7ed59951c3db2546569 140 SUPERFAMILY SSF89946 2 122 5.23E-42 T 28-03-2018 IPR009671 Regulator of ribonuclease activity B domain AM393_RS20765 6de83df88a1b80877edcb8a5c8a2ad10 413 SUPERFAMILY SSF53901 3 252 1.05E-77 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM393_RS20765 6de83df88a1b80877edcb8a5c8a2ad10 413 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 28-03-2018 IPR018201 Beta-ketoacyl synthase, active site AM393_RS20765 6de83df88a1b80877edcb8a5c8a2ad10 413 Gene3D G3DSA:3.40.47.10 261 413 1.8E-52 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM393_RS20765 6de83df88a1b80877edcb8a5c8a2ad10 413 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 369 6.4E-40 T 28-03-2018 IPR014031 Beta-ketoacyl synthase, C-terminal AM393_RS20765 6de83df88a1b80877edcb8a5c8a2ad10 413 PIRSF PIRSF000447 1 413 6.0E-204 T 28-03-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 AM393_RS20765 6de83df88a1b80877edcb8a5c8a2ad10 413 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 247 2.2E-63 T 28-03-2018 IPR014030 Beta-ketoacyl synthase, N-terminal AM393_RS20765 6de83df88a1b80877edcb8a5c8a2ad10 413 SMART SM00825 Beta-ketoacyl synthase 6 413 2.5E-14 T 28-03-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AM393_RS20765 6de83df88a1b80877edcb8a5c8a2ad10 413 Gene3D G3DSA:3.40.47.10 6 260 7.8E-82 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM393_RS20765 6de83df88a1b80877edcb8a5c8a2ad10 413 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 4 411 4.4E-196 T 28-03-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 AM393_RS20765 6de83df88a1b80877edcb8a5c8a2ad10 413 SUPERFAMILY SSF53901 215 412 3.38E-74 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM393_RS00875 88a028ac0c3eefb10560f8b5949e1829 182 Pfam PF01066 CDP-alcohol phosphatidyltransferase 4 71 3.5E-17 T 28-03-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AM393_RS00875 88a028ac0c3eefb10560f8b5949e1829 182 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 3 180 3.3E-62 T 28-03-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 AM393_RS00875 88a028ac0c3eefb10560f8b5949e1829 182 Hamap MF_01437 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [pgsA]. 1 182 34.164 T 28-03-2018 IPR023762 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, bacterial GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 AM393_RS00875 88a028ac0c3eefb10560f8b5949e1829 182 PIRSF PIRSF000847 1 177 2.0E-43 T 28-03-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 AM393_RS00875 88a028ac0c3eefb10560f8b5949e1829 182 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 49 71 - T 28-03-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AM393_RS17175 ef54bb631d9e1bff0731330394321a29 251 SUPERFAMILY SSF54616 19 104 5.89E-6 T 28-03-2018 IPR003163 Transcription regulator HTH, APSES-type DNA-binding domain GO:0003677 AM393_RS17175 ef54bb631d9e1bff0731330394321a29 251 Pfam PF10546 P63C domain 128 205 2.5E-10 T 28-03-2018 IPR018874 Bacteriophage Mx8, p63, C-terminal AM393_RS17175 ef54bb631d9e1bff0731330394321a29 251 Pfam PF04383 KilA-N domain 8 110 1.5E-16 T 28-03-2018 IPR018004 KilA, N-terminal/APSES-type HTH, DNA-binding AM393_RS17175 ef54bb631d9e1bff0731330394321a29 251 SMART SM01252 10 113 2.1E-16 T 28-03-2018 IPR018004 KilA, N-terminal/APSES-type HTH, DNA-binding AM393_RS20760 10c00c0561de7dcf4030f0d748031d11 78 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 41 76 4.0E-4 T 28-03-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 AM393_RS20760 10c00c0561de7dcf4030f0d748031d11 78 Pfam PF00550 Phosphopantetheine attachment site 6 73 7.7E-17 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain AM393_RS20760 10c00c0561de7dcf4030f0d748031d11 78 SUPERFAMILY SSF47336 2 77 1.44E-24 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain AM393_RS20760 10c00c0561de7dcf4030f0d748031d11 78 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 22.327 T 28-03-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 AM393_RS20760 10c00c0561de7dcf4030f0d748031d11 78 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 28-03-2018 IPR006162 Phosphopantetheine attachment site AM393_RS20760 10c00c0561de7dcf4030f0d748031d11 78 Gene3D G3DSA:1.10.1200.10 1 78 8.2E-29 T 28-03-2018 AM393_RS20760 10c00c0561de7dcf4030f0d748031d11 78 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 77 1.1E-38 T 28-03-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 AM393_RS00520 439a2df5abeb3583885c6dc1d0ac3d81 477 Pfam PF13636 RNA-binding PUA-like domain of methyltransferase RsmF 419 468 7.2E-12 T 28-03-2018 IPR027391 rRNA small subunit methyltransferase F, RNA-binding PUA-like domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AM393_RS00520 439a2df5abeb3583885c6dc1d0ac3d81 477 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 293 310 5.5E-28 T 28-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AM393_RS00520 439a2df5abeb3583885c6dc1d0ac3d81 477 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 122 132 5.5E-28 T 28-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AM393_RS00520 439a2df5abeb3583885c6dc1d0ac3d81 477 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 189 201 5.5E-28 T 28-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AM393_RS00520 439a2df5abeb3583885c6dc1d0ac3d81 477 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 91 105 5.5E-28 T 28-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AM393_RS00520 439a2df5abeb3583885c6dc1d0ac3d81 477 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 239 255 5.5E-28 T 28-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AM393_RS00520 439a2df5abeb3583885c6dc1d0ac3d81 477 Hamap MF_01579 Ribosomal RNA small subunit methyltransferase F [rsmF]. 6 473 64.322 T 28-03-2018 IPR023545 rRNA small subunit methyltransferase F GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AM393_RS00520 439a2df5abeb3583885c6dc1d0ac3d81 477 SUPERFAMILY SSF53335 8 310 8.2E-69 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM393_RS00520 439a2df5abeb3583885c6dc1d0ac3d81 477 Gene3D G3DSA:3.30.70.1170 29 100 6.1E-21 T 28-03-2018 AM393_RS00520 439a2df5abeb3583885c6dc1d0ac3d81 477 Pfam PF01189 16S rRNA methyltransferase RsmB/F 115 309 4.6E-47 T 28-03-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AM393_RS00520 439a2df5abeb3583885c6dc1d0ac3d81 477 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 188 199 - T 28-03-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AM393_RS00520 439a2df5abeb3583885c6dc1d0ac3d81 477 Gene3D G3DSA:3.40.50.150 101 317 1.6E-62 T 28-03-2018 AM393_RS00520 439a2df5abeb3583885c6dc1d0ac3d81 477 Pfam PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF 8 105 4.3E-28 T 28-03-2018 IPR031341 Ribosomal RNA small subunit methyltransferase F, N-terminal KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-6790901|Reactome: R-HSA-8869496 AM393_RS00520 439a2df5abeb3583885c6dc1d0ac3d81 477 TIGRFAM TIGR00446 nop2p: NOL1/NOP2/sun family putative RNA methylase 41 310 3.9E-111 T 28-03-2018 IPR011023 Nop2p GO:0003723|GO:0006364|GO:0008757 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-6790901|Reactome: R-HSA-8869496 AM393_RS18015 874f4f8578ea19cbf36992d9e8e73aef 413 Gene3D G3DSA:1.20.1250.20 214 412 3.6E-15 T 28-03-2018 AM393_RS18015 874f4f8578ea19cbf36992d9e8e73aef 413 Pfam PF05977 Transmembrane secretion effector 16 403 1.3E-22 T 28-03-2018 IPR010290 Transmembrane secretion effector AM393_RS18015 874f4f8578ea19cbf36992d9e8e73aef 413 SUPERFAMILY SSF103473 16 407 2.88E-43 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS18015 874f4f8578ea19cbf36992d9e8e73aef 413 Gene3D G3DSA:1.20.1250.20 9 211 1.7E-24 T 28-03-2018 AM393_RS10140 4aa8e1d57fe7310774c23cbcc5f5d5f3 239 SMART SM00345 14 73 2.3E-20 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM393_RS10140 4aa8e1d57fe7310774c23cbcc5f5d5f3 239 TIGRFAM TIGR03337 phnR: phosphonate utilization transcriptional regulator PhnR 9 239 1.2E-116 T 28-03-2018 IPR017722 Phosphonate utilization transcriptional regulator PhnR AM393_RS10140 4aa8e1d57fe7310774c23cbcc5f5d5f3 239 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 73 4.6E-20 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM393_RS10140 4aa8e1d57fe7310774c23cbcc5f5d5f3 239 Gene3D G3DSA:3.40.1410.10 73 239 2.3E-32 T 28-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AM393_RS10140 4aa8e1d57fe7310774c23cbcc5f5d5f3 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 33 47 5.1E-9 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM393_RS10140 4aa8e1d57fe7310774c23cbcc5f5d5f3 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 63 5.1E-9 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM393_RS10140 4aa8e1d57fe7310774c23cbcc5f5d5f3 239 Pfam PF07702 UTRA domain 94 232 1.4E-34 T 28-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AM393_RS10140 4aa8e1d57fe7310774c23cbcc5f5d5f3 239 SMART SM00866 94 233 1.5E-30 T 28-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AM393_RS10140 4aa8e1d57fe7310774c23cbcc5f5d5f3 239 Gene3D G3DSA:1.10.10.10 2 72 1.4E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS10140 4aa8e1d57fe7310774c23cbcc5f5d5f3 239 SUPERFAMILY SSF64288 61 237 2.98E-40 T 28-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AM393_RS10140 4aa8e1d57fe7310774c23cbcc5f5d5f3 239 SUPERFAMILY SSF46785 1 77 1.8E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS18745 9504824b82312fe62de723dd33790e8e 174 SUPERFAMILY SSF103088 61 173 6.54E-35 T 28-03-2018 IPR006665 OmpA-like domain AM393_RS18745 9504824b82312fe62de723dd33790e8e 174 PRINTS PR01021 OMPA domain signature 104 119 6.5E-17 T 28-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AM393_RS18745 9504824b82312fe62de723dd33790e8e 174 PRINTS PR01021 OMPA domain signature 119 135 6.5E-17 T 28-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AM393_RS18745 9504824b82312fe62de723dd33790e8e 174 PRINTS PR01021 OMPA domain signature 74 96 6.5E-17 T 28-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AM393_RS18745 9504824b82312fe62de723dd33790e8e 174 ProSitePatterns PS01068 OmpA-like domain. 106 150 - T 28-03-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 AM393_RS18745 9504824b82312fe62de723dd33790e8e 174 Gene3D G3DSA:3.30.1330.60 45 174 8.7E-35 T 28-03-2018 IPR006665 OmpA-like domain AM393_RS18745 9504824b82312fe62de723dd33790e8e 174 Pfam PF00691 OmpA family 73 168 1.1E-21 T 28-03-2018 IPR006665 OmpA-like domain AM393_RS18745 9504824b82312fe62de723dd33790e8e 174 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 72 174 4.5E-47 T 28-03-2018 IPR014169 Peptidoglycan-associated lipoprotein GO:0009279 AM393_RS19465 204d7734d0c6442f164cad3b81d86a69 113 Pfam PF17282 Family of unknown function (DUF5347) 10 111 9.6E-40 T 28-03-2018 IPR035232 Protein of unknown function DUF5347 AM393_RS19465 204d7734d0c6442f164cad3b81d86a69 113 ProDom PD073252 TRANSPOSABLE STY4640 FELS-2 RETRON ORFC C0938 ELEMENT STY3664 EC67 PHAGE-RELATED 1 111 1.0E-58 T 28-03-2018 IPR035232 Protein of unknown function DUF5347 AM393_RS06975 f932e98696da19f29e52b0cb87656e38 1080 SMART SM00387 709 823 1.5E-32 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS06975 f932e98696da19f29e52b0cb87656e38 1080 SUPERFAMILY SSF53850 302 518 4.51E-27 T 28-03-2018 AM393_RS06975 f932e98696da19f29e52b0cb87656e38 1080 Pfam PF00072 Response regulator receiver domain 846 953 1.4E-24 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM393_RS06975 f932e98696da19f29e52b0cb87656e38 1080 SMART SM00388 596 662 1.7E-20 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM393_RS06975 f932e98696da19f29e52b0cb87656e38 1080 Gene3D G3DSA:3.40.190.10 285 398 2.3E-11 T 28-03-2018 AM393_RS06975 f932e98696da19f29e52b0cb87656e38 1080 Gene3D G3DSA:3.40.190.10 39 169 5.9E-14 T 28-03-2018 AM393_RS06975 f932e98696da19f29e52b0cb87656e38 1080 Gene3D G3DSA:3.40.50.2300 828 968 5.8E-34 T 28-03-2018 AM393_RS06975 f932e98696da19f29e52b0cb87656e38 1080 SUPERFAMILY SSF53850 48 275 4.13E-27 T 28-03-2018 AM393_RS06975 f932e98696da19f29e52b0cb87656e38 1080 PRINTS PR00344 Bacterial sensor protein C-terminal signature 750 764 3.6E-13 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM393_RS06975 f932e98696da19f29e52b0cb87656e38 1080 PRINTS PR00344 Bacterial sensor protein C-terminal signature 783 801 3.6E-13 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM393_RS06975 f932e98696da19f29e52b0cb87656e38 1080 PRINTS PR00344 Bacterial sensor protein C-terminal signature 807 820 3.6E-13 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM393_RS06975 f932e98696da19f29e52b0cb87656e38 1080 Gene3D G3DSA:3.40.190.10 171 280 0.039 T 28-03-2018 AM393_RS06975 f932e98696da19f29e52b0cb87656e38 1080 SMART SM00448 844 955 1.7E-25 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM393_RS06975 f932e98696da19f29e52b0cb87656e38 1080 Pfam PF01627 Hpt domain 989 1058 4.7E-10 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AM393_RS06975 f932e98696da19f29e52b0cb87656e38 1080 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 710 821 2.6E-26 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS06975 f932e98696da19f29e52b0cb87656e38 1080 SUPERFAMILY SSF55874 652 821 4.98E-41 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS06975 f932e98696da19f29e52b0cb87656e38 1080 SMART SM00062 301 520 2.5E-20 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM393_RS06975 f932e98696da19f29e52b0cb87656e38 1080 SMART SM00062 55 277 2.2E-4 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM393_RS06975 f932e98696da19f29e52b0cb87656e38 1080 SMART SM00073 979 1078 4.3E-4 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AM393_RS06975 f932e98696da19f29e52b0cb87656e38 1080 Gene3D G3DSA:3.40.190.10 399 473 1.2E-5 T 28-03-2018 AM393_RS06975 f932e98696da19f29e52b0cb87656e38 1080 Pfam PF00512 His Kinase A (phospho-acceptor) domain 596 662 5.7E-15 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM393_RS06975 f932e98696da19f29e52b0cb87656e38 1080 SUPERFAMILY SSF52172 843 959 6.12E-31 T 28-03-2018 IPR011006 CheY-like superfamily AM393_RS06975 f932e98696da19f29e52b0cb87656e38 1080 SUPERFAMILY SSF47226 938 1046 2.49E-15 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AM393_RS06975 f932e98696da19f29e52b0cb87656e38 1080 SUPERFAMILY SSF47384 580 663 1.77E-17 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM393_RS06975 f932e98696da19f29e52b0cb87656e38 1080 Gene3D G3DSA:3.30.565.10 667 827 2.5E-42 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS06975 f932e98696da19f29e52b0cb87656e38 1080 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 57 275 4.5E-15 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM393_RS06975 f932e98696da19f29e52b0cb87656e38 1080 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 303 516 9.8E-19 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM393_RS06975 f932e98696da19f29e52b0cb87656e38 1080 Gene3D G3DSA:1.20.120.160 969 1078 3.8E-13 T 28-03-2018 AM393_RS06975 f932e98696da19f29e52b0cb87656e38 1080 Gene3D G3DSA:1.10.287.130 587 658 2.3E-15 T 28-03-2018 AM393_RS21805 8fb809e3b52cfb532855e079293d2b87 296 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 16 66 4.3E-9 T 28-03-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain AM393_RS21805 8fb809e3b52cfb532855e079293d2b87 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 292 1.9E-19 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS21805 8fb809e3b52cfb532855e079293d2b87 296 SUPERFAMILY SSF161098 90 276 1.83E-20 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS21805 8fb809e3b52cfb532855e079293d2b87 296 Gene3D G3DSA:1.10.3720.10 15 285 4.7E-28 T 28-03-2018 AM393_RS21920 3376b8597499fd1c252a1c0bbacae4d4 128 Gene3D G3DSA:3.10.180.10 11 123 3.7E-7 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM393_RS21920 3376b8597499fd1c252a1c0bbacae4d4 128 SUPERFAMILY SSF54593 12 116 9.49E-10 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM393_RS08960 6b001b0a891eef8f5a8ffb329607c19c 406 Gene3D G3DSA:1.20.1250.20 212 395 3.2E-17 T 28-03-2018 AM393_RS08960 6b001b0a891eef8f5a8ffb329607c19c 406 Gene3D G3DSA:1.20.1250.20 13 211 9.3E-18 T 28-03-2018 AM393_RS08960 6b001b0a891eef8f5a8ffb329607c19c 406 Pfam PF07690 Major Facilitator Superfamily 225 400 1.3E-12 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS08960 6b001b0a891eef8f5a8ffb329607c19c 406 SUPERFAMILY SSF103473 17 394 4.71E-46 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS05960 63c3a467b15f67fc8878b6c2f0115f9a 192 Pfam PF03695 Uncharacterised protein family (UPF0149) 13 177 9.6E-40 T 28-03-2018 IPR011978 Uncharacterised protein family UPF0149 AM393_RS05960 63c3a467b15f67fc8878b6c2f0115f9a 192 Hamap MF_00346 UPF0149 protein YgfB [ygfB]. 6 190 37.183 T 28-03-2018 IPR011978 Uncharacterised protein family UPF0149 AM393_RS05960 63c3a467b15f67fc8878b6c2f0115f9a 192 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 15 166 2.4E-13 T 28-03-2018 IPR011978 Uncharacterised protein family UPF0149 AM393_RS05960 63c3a467b15f67fc8878b6c2f0115f9a 192 SUPERFAMILY SSF101327 7 176 9.94E-52 T 28-03-2018 IPR011978 Uncharacterised protein family UPF0149 AM393_RS13135 6efd03e953f8dd4b8ee7e0740f87dacd 372 Pfam PF03841 L-seryl-tRNA selenium transferase 14 269 1.3E-12 T 28-03-2018 IPR018319 L-seryl-tRNA selenium transferase-like KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 AM393_RS13135 6efd03e953f8dd4b8ee7e0740f87dacd 372 Gene3D G3DSA:3.40.640.10 42 247 1.7E-20 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM393_RS13135 6efd03e953f8dd4b8ee7e0740f87dacd 372 SUPERFAMILY SSF53383 6 368 8.73E-37 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM393_RS13135 6efd03e953f8dd4b8ee7e0740f87dacd 372 TIGRFAM TIGR01437 selA_rel: uncharacterized pyridoxal phosphate-dependent enzyme 4 365 6.3E-184 T 28-03-2018 IPR006337 Pyridoxal phosphate-dependent enzyme, SelA-like KEGG: 00030+4.3.1.29|MetaCyc: PWY-7310 AM393_RS04610 f22b2943ba2a399f65174c8ebb10d316 690 Pfam PF01590 GAF domain 202 344 8.1E-13 T 28-03-2018 IPR003018 GAF domain GO:0005515 AM393_RS04610 f22b2943ba2a399f65174c8ebb10d316 690 Pfam PF02954 Bacterial regulatory protein, Fis family 643 682 7.4E-5 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM393_RS04610 f22b2943ba2a399f65174c8ebb10d316 690 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 405 418 - T 28-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AM393_RS04610 f22b2943ba2a399f65174c8ebb10d316 690 Gene3D G3DSA:3.30.450.40 10 171 5.5E-14 T 28-03-2018 IPR029016 GAF domain-like AM393_RS04610 f22b2943ba2a399f65174c8ebb10d316 690 Gene3D G3DSA:3.40.50.300 387 553 5.9E-31 T 28-03-2018 AM393_RS04610 f22b2943ba2a399f65174c8ebb10d316 690 Pfam PF00158 Sigma-54 interaction domain 381 548 5.5E-70 T 28-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AM393_RS04610 f22b2943ba2a399f65174c8ebb10d316 690 SMART SM00065 26 174 1.7E-9 T 28-03-2018 IPR003018 GAF domain GO:0005515 AM393_RS04610 f22b2943ba2a399f65174c8ebb10d316 690 SMART SM00065 202 354 5.0E-23 T 28-03-2018 IPR003018 GAF domain GO:0005515 AM393_RS04610 f22b2943ba2a399f65174c8ebb10d316 690 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 594 603 - T 28-03-2018 IPR025944 Sigma-54 interaction domain, conserved site AM393_RS04610 f22b2943ba2a399f65174c8ebb10d316 690 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 603 620 7.6E-5 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM393_RS04610 f22b2943ba2a399f65174c8ebb10d316 690 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 665 685 7.6E-5 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM393_RS04610 f22b2943ba2a399f65174c8ebb10d316 690 SUPERFAMILY SSF46689 593 684 5.38E-7 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS04610 f22b2943ba2a399f65174c8ebb10d316 690 SUPERFAMILY SSF55781 184 360 3.49E-22 T 28-03-2018 IPR029016 GAF domain-like AM393_RS04610 f22b2943ba2a399f65174c8ebb10d316 690 Gene3D G3DSA:1.10.10.60 611 686 2.1E-9 T 28-03-2018 AM393_RS04610 f22b2943ba2a399f65174c8ebb10d316 690 SMART SM00382 401 545 5.6E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS04610 f22b2943ba2a399f65174c8ebb10d316 690 Gene3D G3DSA:1.10.8.60 554 610 3.5E-21 T 28-03-2018 AM393_RS04610 f22b2943ba2a399f65174c8ebb10d316 690 Gene3D G3DSA:3.30.450.40 176 386 1.8E-25 T 28-03-2018 IPR029016 GAF domain-like AM393_RS04610 f22b2943ba2a399f65174c8ebb10d316 690 SUPERFAMILY SSF52540 380 618 6.49E-72 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS04610 f22b2943ba2a399f65174c8ebb10d316 690 SUPERFAMILY SSF55781 26 168 1.57E-11 T 28-03-2018 IPR029016 GAF domain-like AM393_RS13255 4a39eea6a3932bfc49dbbb0474d532eb 521 SUPERFAMILY SSF51338 477 519 2.95E-17 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM393_RS13255 4a39eea6a3932bfc49dbbb0474d532eb 521 SUPERFAMILY SSF51338 3 66 2.95E-17 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM393_RS13255 4a39eea6a3932bfc49dbbb0474d532eb 521 Gene3D G3DSA:2.30.40.10 461 520 1.6E-11 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM393_RS13255 4a39eea6a3932bfc49dbbb0474d532eb 521 Gene3D G3DSA:3.20.20.140 181 460 2.5E-39 T 28-03-2018 AM393_RS13255 4a39eea6a3932bfc49dbbb0474d532eb 521 Gene3D G3DSA:2.30.40.10 1 180 3.8E-11 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM393_RS13255 4a39eea6a3932bfc49dbbb0474d532eb 521 Pfam PF07969 Amidohydrolase family 55 517 3.3E-58 T 28-03-2018 IPR013108 Amidohydrolase 3 AM393_RS13255 4a39eea6a3932bfc49dbbb0474d532eb 521 SUPERFAMILY SSF51556 65 126 6.81E-25 T 28-03-2018 IPR032466 Metal-dependent hydrolase AM393_RS13255 4a39eea6a3932bfc49dbbb0474d532eb 521 SUPERFAMILY SSF51556 180 478 6.81E-25 T 28-03-2018 IPR032466 Metal-dependent hydrolase AM393_RS05690 5cf7b8f6f7cc49ceda7ed4715c59cabf 241 SUPERFAMILY SSF49354 37 156 1.7E-40 T 28-03-2018 IPR008962 PapD-like AM393_RS05690 5cf7b8f6f7cc49ceda7ed4715c59cabf 241 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 179 233 6.4E-11 T 28-03-2018 IPR016148 Pili assembly chaperone, C-terminal AM393_RS05690 5cf7b8f6f7cc49ceda7ed4715c59cabf 241 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 37 156 3.4E-38 T 28-03-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 AM393_RS05690 5cf7b8f6f7cc49ceda7ed4715c59cabf 241 SUPERFAMILY SSF49584 159 234 7.85E-20 T 28-03-2018 IPR016148 Pili assembly chaperone, C-terminal AM393_RS05690 5cf7b8f6f7cc49ceda7ed4715c59cabf 241 Gene3D G3DSA:2.60.40.10 158 241 5.7E-24 T 28-03-2018 IPR013783 Immunoglobulin-like fold AM393_RS05690 5cf7b8f6f7cc49ceda7ed4715c59cabf 241 PRINTS PR00969 Pili chaperone signature 138 153 3.4E-37 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM393_RS05690 5cf7b8f6f7cc49ceda7ed4715c59cabf 241 PRINTS PR00969 Pili chaperone signature 83 104 3.4E-37 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM393_RS05690 5cf7b8f6f7cc49ceda7ed4715c59cabf 241 PRINTS PR00969 Pili chaperone signature 38 47 3.4E-37 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM393_RS05690 5cf7b8f6f7cc49ceda7ed4715c59cabf 241 PRINTS PR00969 Pili chaperone signature 173 188 3.4E-37 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM393_RS05690 5cf7b8f6f7cc49ceda7ed4715c59cabf 241 PRINTS PR00969 Pili chaperone signature 112 129 3.4E-37 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM393_RS05690 5cf7b8f6f7cc49ceda7ed4715c59cabf 241 Gene3D G3DSA:2.60.40.10 38 154 5.3E-34 T 28-03-2018 IPR013783 Immunoglobulin-like fold AM393_RS05690 5cf7b8f6f7cc49ceda7ed4715c59cabf 241 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 111 128 - T 28-03-2018 IPR018046 Pili assembly chaperone, conserved site AM393_RS16310 93fca80ee1d59d75370dc7582f1b3766 139 Gene3D G3DSA:1.10.940.10 1 138 4.4E-43 T 28-03-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 AM393_RS16310 93fca80ee1d59d75370dc7582f1b3766 139 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 6 131 7.4E-46 T 28-03-2018 IPR011605 NusB antitermination factor GO:0006353 AM393_RS16310 93fca80ee1d59d75370dc7582f1b3766 139 SUPERFAMILY SSF48013 3 132 6.67E-43 T 28-03-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 AM393_RS16310 93fca80ee1d59d75370dc7582f1b3766 139 Pfam PF01029 NusB family 7 131 1.0E-35 T 28-03-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 AM393_RS16310 93fca80ee1d59d75370dc7582f1b3766 139 Hamap MF_00073 N utilization substance protein B homolog [nusB]. 4 135 23.687 T 28-03-2018 IPR011605 NusB antitermination factor GO:0006353 AM393_RS23865 fb5fc9a2f11cc727af04a02e63e920ab 232 Pfam PF00392 Bacterial regulatory proteins, gntR family 3 65 9.6E-21 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM393_RS23865 fb5fc9a2f11cc727af04a02e63e920ab 232 Pfam PF07702 UTRA domain 90 224 8.1E-33 T 28-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AM393_RS23865 fb5fc9a2f11cc727af04a02e63e920ab 232 Gene3D G3DSA:3.40.1410.10 88 227 6.2E-32 T 28-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AM393_RS23865 fb5fc9a2f11cc727af04a02e63e920ab 232 SUPERFAMILY SSF64288 54 227 1.15E-37 T 28-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AM393_RS23865 fb5fc9a2f11cc727af04a02e63e920ab 232 Gene3D G3DSA:1.10.10.10 2 73 1.2E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS23865 fb5fc9a2f11cc727af04a02e63e920ab 232 SMART SM00345 6 65 2.6E-20 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM393_RS23865 fb5fc9a2f11cc727af04a02e63e920ab 232 SMART SM00866 86 225 5.7E-32 T 28-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AM393_RS23865 fb5fc9a2f11cc727af04a02e63e920ab 232 SUPERFAMILY SSF46785 2 69 2.05E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS17480 fe41f1d943754ce03796556bf1635bde 360 Gene3D G3DSA:1.10.3470.10 25 360 2.1E-75 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AM393_RS17480 fe41f1d943754ce03796556bf1635bde 360 SUPERFAMILY SSF81345 23 355 1.22E-82 T 28-03-2018 IPR029022 ABC transporter, BtuC-like AM393_RS17480 fe41f1d943754ce03796556bf1635bde 360 Pfam PF01032 FecCD transport family 40 355 2.3E-88 T 28-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 AM393_RS12215 155be166d71fedffb55eb3ee3c2b66b0 285 SUPERFAMILY SSF161098 22 281 5.1E-50 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS12215 155be166d71fedffb55eb3ee3c2b66b0 285 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 102 279 5.5E-17 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS12215 155be166d71fedffb55eb3ee3c2b66b0 285 Gene3D G3DSA:1.10.3720.10 12 273 2.3E-42 T 28-03-2018 AM393_RS26180 6c9f8acdb4f73cc18c6ab63e71d43f84 398 Pfam PF07690 Major Facilitator Superfamily 20 296 8.9E-34 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS26180 6c9f8acdb4f73cc18c6ab63e71d43f84 398 SUPERFAMILY SSF103473 10 394 1.31E-64 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS26180 6c9f8acdb4f73cc18c6ab63e71d43f84 398 ProSitePatterns PS00217 Sugar transport proteins signature 2. 111 136 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM393_RS26180 6c9f8acdb4f73cc18c6ab63e71d43f84 398 Gene3D G3DSA:1.20.1250.20 10 199 8.4E-32 T 28-03-2018 AM393_RS26180 6c9f8acdb4f73cc18c6ab63e71d43f84 398 Gene3D G3DSA:1.20.1250.20 200 394 1.6E-18 T 28-03-2018 AM393_RS06485 be4b12ba405af59c1bbf31b5e67ea2d9 699 Pfam PF10412 Type IV secretion-system coupling protein DNA-binding domain 182 225 1.3E-4 T 28-03-2018 IPR019476 Type IV secretion system coupling protein TraD, DNA-binding domain AM393_RS06485 be4b12ba405af59c1bbf31b5e67ea2d9 699 TIGRFAM TIGR03743 SXT_TraD: conjugative coupling factor TraD, SXT/TOL subfamily 7 650 4.4E-266 T 28-03-2018 IPR022458 Conjugative coupling factor TraG/TraD AM393_RS06485 be4b12ba405af59c1bbf31b5e67ea2d9 699 Gene3D G3DSA:3.40.50.300 127 662 3.0E-30 T 28-03-2018 AM393_RS06485 be4b12ba405af59c1bbf31b5e67ea2d9 699 TIGRFAM TIGR03754 conj_TOL_TraD: conjugative coupling factor TraD, PFGI-1 class 7 650 0.0 T 28-03-2018 IPR022503 Conjugative coupling factor TraG/TraD, PFGI-1 AM393_RS06485 be4b12ba405af59c1bbf31b5e67ea2d9 699 SUPERFAMILY SSF52540 393 645 3.15E-56 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS06485 be4b12ba405af59c1bbf31b5e67ea2d9 699 SUPERFAMILY SSF52540 143 335 3.15E-56 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS06485 be4b12ba405af59c1bbf31b5e67ea2d9 699 Pfam PF12696 TraM recognition site of TraD and TraG 501 629 2.6E-11 T 28-03-2018 IPR032689 TraD/TraG, TraM recognition site AM393_RS16730 198354a97c98680e7fbf96a918eccc9d 175 Pfam PF07445 Primosomal replication protein priC 8 172 9.5E-47 T 28-03-2018 IPR010890 Primosomal replication PriB/PriC AM393_RS09200 db377e6a28eabcbc60aaa06251ce826e 517 Pfam PF10995 GGDEF I-site like or GIL domain 161 467 8.9E-126 T 28-03-2018 IPR017745 Cellulose biosynthesis protein BcsE AM393_RS09200 db377e6a28eabcbc60aaa06251ce826e 517 TIGRFAM TIGR03369 cellulose_bcsE: cellulose biosynthesis protein BcsE 156 470 2.4E-126 T 28-03-2018 IPR017745 Cellulose biosynthesis protein BcsE AM393_RS13915 810fd65872432bf82ed33cad31ee36a8 285 TIGRFAM TIGR02298 HpaD_Fe: 3,4-dihydroxyphenylacetate 2,3-dioxygenase 1 281 7.5E-163 T 28-03-2018 IPR011984 3,4-dihydroxyphenylacetate 2,3-dioxygenase GO:0008687 KEGG: 00350+1.13.11.15 AM393_RS13915 810fd65872432bf82ed33cad31ee36a8 285 SUPERFAMILY SSF53213 12 279 2.22E-52 T 28-03-2018 AM393_RS13915 810fd65872432bf82ed33cad31ee36a8 285 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 7 279 1.0E-84 T 28-03-2018 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 AM393_RS13915 810fd65872432bf82ed33cad31ee36a8 285 Gene3D G3DSA:3.40.830.10 2 276 1.7E-54 T 28-03-2018 AM393_RS28625 5475ac97c9fee8f414c2884b6ae92183 117 SUPERFAMILY SSF46785 6 104 2.15E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS28625 5475ac97c9fee8f414c2884b6ae92183 117 Gene3D G3DSA:1.10.10.10 3 108 5.1E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS28625 5475ac97c9fee8f414c2884b6ae92183 117 SMART SM00418 8 86 2.3E-30 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM393_RS28625 5475ac97c9fee8f414c2884b6ae92183 117 ProSitePatterns PS00846 Bacterial regulatory proteins, arsR family signature. 32 50 - T 28-03-2018 IPR018334 ArsR-type transcription regulator, HTH motif GO:0003700|GO:0005622|GO:0006355 AM393_RS28625 5475ac97c9fee8f414c2884b6ae92183 117 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 30 41 9.8E-26 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM393_RS28625 5475ac97c9fee8f414c2884b6ae92183 117 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 58 73 9.8E-26 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM393_RS28625 5475ac97c9fee8f414c2884b6ae92183 117 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 43 58 9.8E-26 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM393_RS28625 5475ac97c9fee8f414c2884b6ae92183 117 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 10 25 9.8E-26 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM393_RS28625 5475ac97c9fee8f414c2884b6ae92183 117 Pfam PF01022 Bacterial regulatory protein, arsR family 15 60 2.4E-17 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM393_RS23645 c7737a3ad10ae49c140126d63eddaba0 106 Gene3D G3DSA:1.20.1290.10 2 104 3.3E-30 T 28-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AM393_RS23645 c7737a3ad10ae49c140126d63eddaba0 106 Pfam PF02627 Carboxymuconolactone decarboxylase family 16 99 8.0E-20 T 28-03-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AM393_RS23645 c7737a3ad10ae49c140126d63eddaba0 106 SUPERFAMILY SSF69118 9 100 3.93E-28 T 28-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AM393_RS00790 5a084df8202e8eead0ce8f7de7d10b6b 326 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 26 319 4.2E-88 T 28-03-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain AM393_RS00790 5a084df8202e8eead0ce8f7de7d10b6b 326 SUPERFAMILY SSF53822 26 324 8.05E-69 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AM393_RS00790 5a084df8202e8eead0ce8f7de7d10b6b 326 Gene3D G3DSA:3.40.50.2300 148 322 2.3E-15 T 28-03-2018 AM393_RS00790 5a084df8202e8eead0ce8f7de7d10b6b 326 Gene3D G3DSA:3.40.50.2300 21 147 1.7E-11 T 28-03-2018 AM393_RS00790 5a084df8202e8eead0ce8f7de7d10b6b 326 PIRSF PIRSF002816 1 326 4.9E-155 T 28-03-2018 IPR026266 L-arabinose-binding periplasmic protein GO:0042882 AM393_RS10605 98c0b1a642e73ab57fb71533ca5b999e 330 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 2.2E-18 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM393_RS10605 98c0b1a642e73ab57fb71533ca5b999e 330 SUPERFAMILY SSF53822 60 329 1.46E-90 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AM393_RS10605 98c0b1a642e73ab57fb71533ca5b999e 330 Gene3D G3DSA:3.40.50.2300 55 176 3.8E-31 T 28-03-2018 AM393_RS10605 98c0b1a642e73ab57fb71533ca5b999e 330 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 4.8E-6 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM393_RS10605 98c0b1a642e73ab57fb71533ca5b999e 330 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 4.8E-6 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM393_RS10605 98c0b1a642e73ab57fb71533ca5b999e 330 SUPERFAMILY SSF47413 2 59 7.19E-16 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM393_RS10605 98c0b1a642e73ab57fb71533ca5b999e 330 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 28-03-2018 AM393_RS10605 98c0b1a642e73ab57fb71533ca5b999e 330 Pfam PF13377 Periplasmic binding protein-like domain 169 329 8.9E-43 T 28-03-2018 AM393_RS10605 98c0b1a642e73ab57fb71533ca5b999e 330 Gene3D G3DSA:1.10.260.40 2 54 1.5E-19 T 28-03-2018 AM393_RS10605 98c0b1a642e73ab57fb71533ca5b999e 330 SMART SM00354 1 71 4.1E-32 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM393_RS10605 98c0b1a642e73ab57fb71533ca5b999e 330 Gene3D G3DSA:3.40.50.2300 177 313 7.6E-47 T 28-03-2018 AM393_RS24425 5f1c1079c72ecfeb58506827f6ec06f9 247 Gene3D G3DSA:3.40.50.1860 108 205 3.5E-13 T 28-03-2018 AM393_RS24425 5f1c1079c72ecfeb58506827f6ec06f9 247 Pfam PF01177 Asp/Glu/Hydantoin racemase 8 211 5.1E-11 T 28-03-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM393_RS24425 5f1c1079c72ecfeb58506827f6ec06f9 247 Gene3D G3DSA:3.40.50.1860 5 107 1.0E-6 T 28-03-2018 AM393_RS24380 a413e2041efd9a599a9bacd7897e8e4d 257 SUPERFAMILY SSF51182 22 185 2.58E-13 T 28-03-2018 IPR011051 RmlC-like cupin domain AM393_RS24380 a413e2041efd9a599a9bacd7897e8e4d 257 Gene3D G3DSA:1.10.10.60 129 214 1.6E-7 T 28-03-2018 AM393_RS24380 a413e2041efd9a599a9bacd7897e8e4d 257 SUPERFAMILY SSF46689 213 255 2.8E-7 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS24380 a413e2041efd9a599a9bacd7897e8e4d 257 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 211 252 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM393_RS24380 a413e2041efd9a599a9bacd7897e8e4d 257 Pfam PF02311 AraC-like ligand binding domain 31 142 2.5E-10 T 28-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AM393_RS24380 a413e2041efd9a599a9bacd7897e8e4d 257 Pfam PF12833 Helix-turn-helix domain 181 255 1.2E-17 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM393_RS24380 a413e2041efd9a599a9bacd7897e8e4d 257 Gene3D G3DSA:1.10.10.60 215 256 8.6E-7 T 28-03-2018 AM393_RS24380 a413e2041efd9a599a9bacd7897e8e4d 257 SMART SM00342 174 256 7.8E-17 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM393_RS24380 a413e2041efd9a599a9bacd7897e8e4d 257 Gene3D G3DSA:2.60.120.10 5 128 5.0E-9 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AM393_RS20710 29282248dfe3a872ce78d581409d76f3 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 69 5.4E-17 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS20710 29282248dfe3a872ce78d581409d76f3 311 Pfam PF03466 LysR substrate binding domain 95 297 5.2E-37 T 28-03-2018 IPR005119 LysR, substrate-binding AM393_RS20710 29282248dfe3a872ce78d581409d76f3 311 SUPERFAMILY SSF53850 96 302 2.71E-40 T 28-03-2018 AM393_RS20710 29282248dfe3a872ce78d581409d76f3 311 Gene3D G3DSA:3.40.190.10 97 183 4.8E-12 T 28-03-2018 AM393_RS20710 29282248dfe3a872ce78d581409d76f3 311 Gene3D G3DSA:1.10.10.10 2 93 9.1E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS20710 29282248dfe3a872ce78d581409d76f3 311 Gene3D G3DSA:3.40.190.10 184 270 1.5E-20 T 28-03-2018 AM393_RS20710 29282248dfe3a872ce78d581409d76f3 311 SUPERFAMILY SSF46785 8 114 4.3E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS21785 663e081ced6ca8498a426acf68525599 180 SUPERFAMILY SSF51182 1 171 1.84E-44 T 28-03-2018 IPR011051 RmlC-like cupin domain AM393_RS21785 663e081ced6ca8498a426acf68525599 180 Pfam PF05962 HutD 10 163 1.0E-42 T 28-03-2018 IPR010282 Uncharacterised protein family HutD/Ves AM393_RS21785 663e081ced6ca8498a426acf68525599 180 Gene3D G3DSA:2.60.120.10 108 178 8.6E-6 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AM393_RS21785 663e081ced6ca8498a426acf68525599 180 Gene3D G3DSA:2.60.120.10 7 107 9.6E-29 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AM393_RS18145 22752a3b6a6b3171cebb0504a1e7de7b 202 SUPERFAMILY SSF53639 2 197 2.94E-43 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal AM393_RS18145 22752a3b6a6b3171cebb0504a1e7de7b 202 SMART SM01007 7 195 5.9E-48 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal AM393_RS18145 22752a3b6a6b3171cebb0504a1e7de7b 202 Hamap MF_01677 Methylthioribulose-1-phosphate dehydratase [mtnB]. 1 202 119.162 T 28-03-2018 IPR017714 Methylthioribulose-1-phosphate dehydratase GO:0005737|GO:0019509|GO:0046872 KEGG: 00270+4.2.1.109|KEGG: 00400+4.2.1.10|MetaCyc: PWY-4361|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|Reactome: R-HSA-1237112 AM393_RS18145 22752a3b6a6b3171cebb0504a1e7de7b 202 Gene3D G3DSA:3.40.225.10 1 201 6.3E-46 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal AM393_RS18145 22752a3b6a6b3171cebb0504a1e7de7b 202 TIGRFAM TIGR03328 salvage_mtnB: methylthioribulose-1-phosphate dehydratase 9 199 5.5E-66 T 28-03-2018 IPR017714 Methylthioribulose-1-phosphate dehydratase GO:0005737|GO:0019509|GO:0046872 KEGG: 00270+4.2.1.109|KEGG: 00400+4.2.1.10|MetaCyc: PWY-4361|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|Reactome: R-HSA-1237112 AM393_RS18145 22752a3b6a6b3171cebb0504a1e7de7b 202 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 8 194 5.2E-41 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal AM393_RS15920 b327f2df594ec031dcb7801d6ac6a187 180 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 143 159 2.1E-7 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS15920 b327f2df594ec031dcb7801d6ac6a187 180 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 129 143 2.1E-7 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS15920 b327f2df594ec031dcb7801d6ac6a187 180 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 159 171 2.1E-7 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS15920 b327f2df594ec031dcb7801d6ac6a187 180 Gene3D G3DSA:1.10.10.10 63 180 8.8E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS15920 b327f2df594ec031dcb7801d6ac6a187 180 Pfam PF00196 Bacterial regulatory proteins, luxR family 129 171 1.9E-11 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS15920 b327f2df594ec031dcb7801d6ac6a187 180 ProDom PD116027 TRANSCRIPTION DNA-BINDING REGULATION RMBA YQEH ORF3-QACEDELTA1 FUSION CYTOPLASMIC ECS3703 TRANSMEMBRANE 1 178 1.0E-9 T 28-03-2018 AM393_RS15920 b327f2df594ec031dcb7801d6ac6a187 180 SUPERFAMILY SSF46894 123 171 1.12E-11 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM393_RS15920 b327f2df594ec031dcb7801d6ac6a187 180 SMART SM00421 126 175 0.0049 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS02795 fd022d986e29f8bf57a59922926de72f 238 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 21 122 2.2E-13 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AM393_RS02795 fd022d986e29f8bf57a59922926de72f 238 Gene3D G3DSA:1.10.3720.10 6 231 1.5E-30 T 28-03-2018 AM393_RS02795 fd022d986e29f8bf57a59922926de72f 238 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 37 220 2.4E-13 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS02795 fd022d986e29f8bf57a59922926de72f 238 SUPERFAMILY SSF161098 17 220 1.57E-35 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS00760 f89fbc100bde81465cdff14ab5b874e8 527 Pfam PF13347 MFS/sugar transport protein 13 451 1.2E-52 T 28-03-2018 AM393_RS00760 f89fbc100bde81465cdff14ab5b874e8 527 SUPERFAMILY SSF103473 10 445 1.83E-30 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS00760 f89fbc100bde81465cdff14ab5b874e8 527 Gene3D G3DSA:1.20.1250.20 234 451 5.2E-10 T 28-03-2018 AM393_RS00760 f89fbc100bde81465cdff14ab5b874e8 527 Gene3D G3DSA:1.20.1250.20 2 222 4.8E-20 T 28-03-2018 AM393_RS01840 fd8b497b2ca720a606ca352d373cd5ef 193 Hamap MF_00146 dCTP deaminase [dcd]. 1 190 33.962 T 28-03-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187 AM393_RS01840 fd8b497b2ca720a606ca352d373cd5ef 193 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 2 190 1.2E-66 T 28-03-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187 AM393_RS01840 fd8b497b2ca720a606ca352d373cd5ef 193 Gene3D G3DSA:2.70.40.10 2 168 2.2E-44 T 28-03-2018 AM393_RS01840 fd8b497b2ca720a606ca352d373cd5ef 193 Pfam PF00692 dUTPase 79 185 5.6E-8 T 28-03-2018 IPR029054 dUTPase-like AM393_RS01840 fd8b497b2ca720a606ca352d373cd5ef 193 SUPERFAMILY SSF51283 1 193 2.75E-59 T 28-03-2018 IPR029054 dUTPase-like AM393_RS13140 abf35b747c2d7572131f75a52f0b05c6 246 TIGRFAM TIGR03581 EF_0839: conserved hypothetical protein EF_0839/AHA_3917 8 243 2.2E-123 T 28-03-2018 IPR010763 2-dehydro-3-deoxy-phosphogluconate aldolase KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AM393_RS13140 abf35b747c2d7572131f75a52f0b05c6 246 SUPERFAMILY SSF51569 50 205 1.44E-7 T 28-03-2018 AM393_RS13140 abf35b747c2d7572131f75a52f0b05c6 246 Gene3D G3DSA:3.20.20.70 4 245 1.2E-119 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM393_RS13140 abf35b747c2d7572131f75a52f0b05c6 246 Pfam PF07071 KDGP aldolase 8 225 5.3E-111 T 28-03-2018 IPR010763 2-dehydro-3-deoxy-phosphogluconate aldolase KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AM393_RS25510 4bbe83aca3d82161a081efc9dd792ac8 199 SUPERFAMILY SSF48498 81 194 1.89E-24 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AM393_RS25510 4bbe83aca3d82161a081efc9dd792ac8 199 Gene3D G3DSA:1.10.357.10 60 195 8.8E-25 T 28-03-2018 AM393_RS25510 4bbe83aca3d82161a081efc9dd792ac8 199 Gene3D G3DSA:1.10.10.60 2 59 7.8E-13 T 28-03-2018 AM393_RS25510 4bbe83aca3d82161a081efc9dd792ac8 199 SUPERFAMILY SSF46689 8 79 4.46E-15 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS25510 4bbe83aca3d82161a081efc9dd792ac8 199 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 54 1.1E-10 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM393_RS25510 4bbe83aca3d82161a081efc9dd792ac8 199 Pfam PF16925 Bacterial transcriptional repressor C-terminal 84 188 1.5E-12 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AM393_RS23690 99f61c5b9c8b5e1c166cefe842bf0e25 223 SUPERFAMILY SSF161098 11 205 4.19E-43 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS23690 99f61c5b9c8b5e1c166cefe842bf0e25 223 Gene3D G3DSA:1.10.3720.10 6 222 5.0E-34 T 28-03-2018 AM393_RS23690 99f61c5b9c8b5e1c166cefe842bf0e25 223 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 48 221 4.9E-20 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS03830 1b5b3cc178506abc02736878c56433e8 127 ProSitePatterns PS00850 Glycine radical domain signature. 97 105 - T 28-03-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site AM393_RS03830 1b5b3cc178506abc02736878c56433e8 127 Hamap MF_00806 Autonomous glycyl radical cofactor [grcA]. 1 127 42.329 T 28-03-2018 IPR011140 Autonomous glycyl radical cofactor GrcA AM393_RS03830 1b5b3cc178506abc02736878c56433e8 127 Gene3D G3DSA:3.20.70.20 7 127 4.4E-30 T 28-03-2018 AM393_RS03830 1b5b3cc178506abc02736878c56433e8 127 SUPERFAMILY SSF51998 46 125 1.74E-24 T 28-03-2018 AM393_RS03830 1b5b3cc178506abc02736878c56433e8 127 TIGRFAM TIGR04365 spare_glycyl: autonomous glycyl radical cofactor GrcA 2 127 4.3E-69 T 28-03-2018 IPR011140 Autonomous glycyl radical cofactor GrcA AM393_RS03830 1b5b3cc178506abc02736878c56433e8 127 Pfam PF01228 Glycine radical 16 108 4.7E-23 T 28-03-2018 IPR001150 Glycine radical domain GO:0003824|GO:0008152 AM393_RS03830 1b5b3cc178506abc02736878c56433e8 127 PIRSF PIRSF000378 2 127 2.1E-55 T 28-03-2018 IPR011140 Autonomous glycyl radical cofactor GrcA AM393_RS06950 0611a25aded46a48ed368e75e6604b5d 168 SMART SM00986 3 159 4.8E-4 T 28-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AM393_RS06950 0611a25aded46a48ed368e75e6604b5d 168 Hamap MF_01956 G/U mismatch-specific DNA glycosylase [mug]. 1 168 47.608 T 28-03-2018 IPR023502 G/U mismatch-specific DNA glycosylase, bacterial GO:0006281|GO:0019104 AM393_RS06950 0611a25aded46a48ed368e75e6604b5d 168 Pfam PF03167 Uracil DNA glycosylase superfamily 6 159 2.1E-24 T 28-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AM393_RS06950 0611a25aded46a48ed368e75e6604b5d 168 SUPERFAMILY SSF52141 2 161 3.75E-46 T 28-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AM393_RS06950 0611a25aded46a48ed368e75e6604b5d 168 SMART SM00987 3 159 4.8E-4 T 28-03-2018 AM393_RS06950 0611a25aded46a48ed368e75e6604b5d 168 Gene3D G3DSA:3.40.470.10 4 168 1.1E-51 T 28-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AM393_RS06190 00148d9c7f6738fb8254d85f34cd6354 326 SUPERFAMILY SSF52540 4 324 9.32E-60 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS06190 00148d9c7f6738fb8254d85f34cd6354 326 SMART SM00382 119 244 3.9E-4 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS06190 00148d9c7f6738fb8254d85f34cd6354 326 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 190 204 - T 28-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 AM393_RS06190 00148d9c7f6738fb8254d85f34cd6354 326 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 2 325 1.8E-129 T 28-03-2018 IPR006321 Pilus retraction protein PilT GO:0005524|GO:0006810 AM393_RS06190 00148d9c7f6738fb8254d85f34cd6354 326 Gene3D G3DSA:3.30.450.90 1 97 1.2E-14 T 28-03-2018 AM393_RS06190 00148d9c7f6738fb8254d85f34cd6354 326 Gene3D G3DSA:3.40.50.300 270 326 4.4E-7 T 28-03-2018 AM393_RS06190 00148d9c7f6738fb8254d85f34cd6354 326 Gene3D G3DSA:3.40.50.300 114 269 2.8E-25 T 28-03-2018 AM393_RS06190 00148d9c7f6738fb8254d85f34cd6354 326 Pfam PF00437 Type II/IV secretion system protein 12 257 6.4E-41 T 28-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 AM393_RS07125 87b810c7fd96926f6dec2025ecf6d541 344 Pfam PF02653 Branched-chain amino acid transport system / permease component 37 300 6.8E-46 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AM393_RS07125 87b810c7fd96926f6dec2025ecf6d541 344 Gene3D G3DSA:1.10.3470.10 26 306 5.4E-32 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AM393_RS19910 0b74e27d495451d8bb37385bb189891d 447 Gene3D G3DSA:1.20.272.10 252 346 3.7E-37 T 28-03-2018 AM393_RS19910 0b74e27d495451d8bb37385bb189891d 447 Gene3D G3DSA:3.40.50.300 2 153 3.2E-30 T 28-03-2018 AM393_RS19910 0b74e27d495451d8bb37385bb189891d 447 Pfam PF16193 AAA C-terminal domain 188 267 1.9E-23 T 28-03-2018 IPR032423 AAA C-terminal domain AM393_RS19910 0b74e27d495451d8bb37385bb189891d 447 SMART SM00382 49 165 5.5E-18 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS19910 0b74e27d495451d8bb37385bb189891d 447 Gene3D G3DSA:1.10.8.60 154 243 5.7E-20 T 28-03-2018 AM393_RS19910 0b74e27d495451d8bb37385bb189891d 447 SUPERFAMILY SSF48019 252 434 1.08E-72 T 28-03-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 AM393_RS19910 0b74e27d495451d8bb37385bb189891d 447 Gene3D G3DSA:1.10.3710.10 348 447 7.1E-35 T 28-03-2018 AM393_RS19910 0b74e27d495451d8bb37385bb189891d 447 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 159 3.6E-17 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AM393_RS19910 0b74e27d495451d8bb37385bb189891d 447 SUPERFAMILY SSF52540 7 234 2.72E-45 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS19910 0b74e27d495451d8bb37385bb189891d 447 Pfam PF12002 MgsA AAA+ ATPase C terminal 268 434 2.5E-66 T 28-03-2018 IPR021886 MgsA AAA+ ATPase C-terminal AM393_RS13205 917da701f5f177d6b9d91953108a5bd6 315 Pfam PF13377 Periplasmic binding protein-like domain 168 312 5.9E-18 T 28-03-2018 AM393_RS13205 917da701f5f177d6b9d91953108a5bd6 315 Gene3D G3DSA:3.40.50.2300 173 304 8.8E-22 T 28-03-2018 AM393_RS13205 917da701f5f177d6b9d91953108a5bd6 315 ProSitePatterns PS00356 LacI-type HTH domain signature. 7 25 - T 28-03-2018 AM393_RS13205 917da701f5f177d6b9d91953108a5bd6 315 TIGRFAM TIGR02405 trehalos_R_Ecol: trehalose operon repressor 4 314 1.1E-162 T 28-03-2018 IPR012771 Trehalose operon repressor GO:0003677|GO:0005991|GO:0045892 AM393_RS13205 917da701f5f177d6b9d91953108a5bd6 315 SUPERFAMILY SSF53822 63 314 1.69E-57 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AM393_RS13205 917da701f5f177d6b9d91953108a5bd6 315 Pfam PF00356 Bacterial regulatory proteins, lacI family 6 51 4.5E-21 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM393_RS13205 917da701f5f177d6b9d91953108a5bd6 315 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 6 16 6.2E-6 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM393_RS13205 917da701f5f177d6b9d91953108a5bd6 315 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 16 26 6.2E-6 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM393_RS13205 917da701f5f177d6b9d91953108a5bd6 315 Gene3D G3DSA:1.10.10.10 1 19 0.044 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS13205 917da701f5f177d6b9d91953108a5bd6 315 Gene3D G3DSA:1.10.260.40 20 56 8.2E-22 T 28-03-2018 AM393_RS13205 917da701f5f177d6b9d91953108a5bd6 315 SUPERFAMILY SSF47413 3 60 9.6E-17 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM393_RS13205 917da701f5f177d6b9d91953108a5bd6 315 SMART SM00354 4 74 1.8E-33 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM393_RS13205 917da701f5f177d6b9d91953108a5bd6 315 Gene3D G3DSA:3.40.50.2300 57 172 3.6E-18 T 28-03-2018 AM393_RS13980 f37390108525775a0d3b9db70c4aabdd 495 Pfam PF00474 Sodium:solute symporter family 34 419 8.1E-41 T 28-03-2018 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 AM393_RS19305 50886512aae4f28d3d501d76c236e9ca 271 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 6 232 1.1E-18 T 28-03-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 AM393_RS19305 50886512aae4f28d3d501d76c236e9ca 271 Gene3D G3DSA:3.40.50.1000 1 268 1.8E-35 T 28-03-2018 IPR023214 HAD-like domain AM393_RS19305 50886512aae4f28d3d501d76c236e9ca 271 SUPERFAMILY SSF56784 1 262 5.05E-63 T 28-03-2018 IPR023214 HAD-like domain AM393_RS19305 50886512aae4f28d3d501d76c236e9ca 271 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 259 2.5E-51 T 28-03-2018 IPR023214 HAD-like domain AM393_RS19305 50886512aae4f28d3d501d76c236e9ca 271 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 259 2.1E-60 T 28-03-2018 IPR000150 Cof family GO:0016787 AM393_RS05930 765cc48eef8fb7a47dab62b184f7c020 957 Gene3D G3DSA:3.90.1150.10 775 906 9.2E-45 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM393_RS05930 765cc48eef8fb7a47dab62b184f7c020 957 Gene3D G3DSA:3.40.640.10 96 342 2.8E-34 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM393_RS05930 765cc48eef8fb7a47dab62b184f7c020 957 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 8 956 25.587 T 28-03-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 AM393_RS05930 765cc48eef8fb7a47dab62b184f7c020 957 Pfam PF02347 Glycine cleavage system P-protein 461 739 6.3E-9 T 28-03-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 AM393_RS05930 765cc48eef8fb7a47dab62b184f7c020 957 Pfam PF02347 Glycine cleavage system P-protein 16 438 2.1E-190 T 28-03-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 AM393_RS05930 765cc48eef8fb7a47dab62b184f7c020 957 SUPERFAMILY SSF53383 929 951 4.03E-101 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM393_RS05930 765cc48eef8fb7a47dab62b184f7c020 957 SUPERFAMILY SSF53383 463 889 4.03E-101 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM393_RS05930 765cc48eef8fb7a47dab62b184f7c020 957 Gene3D G3DSA:3.40.640.10 530 774 2.1E-42 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM393_RS05930 765cc48eef8fb7a47dab62b184f7c020 957 Gene3D G3DSA:3.90.1150.10 343 441 4.7E-21 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM393_RS05930 765cc48eef8fb7a47dab62b184f7c020 957 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 17 950 0.0 T 28-03-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 AM393_RS05930 765cc48eef8fb7a47dab62b184f7c020 957 SUPERFAMILY SSF53383 17 440 6.7E-97 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM393_RS07920 a0dff8067935aadfc92a7e6070eae0a3 155 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 116 129 1.4E-18 T 28-03-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 AM393_RS07920 a0dff8067935aadfc92a7e6070eae0a3 155 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 101 115 1.4E-18 T 28-03-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 AM393_RS07920 a0dff8067935aadfc92a7e6070eae0a3 155 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 84 97 1.4E-18 T 28-03-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 AM393_RS07920 a0dff8067935aadfc92a7e6070eae0a3 155 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 111 128 - T 28-03-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AM393_RS07920 a0dff8067935aadfc92a7e6070eae0a3 155 SUPERFAMILY SSF51230 80 155 6.54E-26 T 28-03-2018 IPR011053 Single hybrid motif AM393_RS07920 a0dff8067935aadfc92a7e6070eae0a3 155 Pfam PF00364 Biotin-requiring enzyme 82 154 2.9E-25 T 28-03-2018 IPR000089 Biotin/lipoyl attachment AM393_RS07920 a0dff8067935aadfc92a7e6070eae0a3 155 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 155 1.3E-68 T 28-03-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 AM393_RS07920 a0dff8067935aadfc92a7e6070eae0a3 155 Gene3D G3DSA:2.40.50.100 92 155 1.4E-18 T 28-03-2018 AM393_RS03865 ff56d724ae9b62425ff73f24a8939675 451 Gene3D G3DSA:3.30.870.10 14 226 9.3E-18 T 28-03-2018 AM393_RS03865 ff56d724ae9b62425ff73f24a8939675 451 SMART SM00155 133 159 0.072 T 28-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AM393_RS03865 ff56d724ae9b62425ff73f24a8939675 451 SMART SM00155 352 379 1.1E-4 T 28-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AM393_RS03865 ff56d724ae9b62425ff73f24a8939675 451 Gene3D G3DSA:3.30.870.10 249 417 3.6E-17 T 28-03-2018 AM393_RS03865 ff56d724ae9b62425ff73f24a8939675 451 SUPERFAMILY SSF56024 253 393 5.34E-18 T 28-03-2018 AM393_RS03865 ff56d724ae9b62425ff73f24a8939675 451 SUPERFAMILY SSF56024 9 215 2.7E-27 T 28-03-2018 AM393_RS03865 ff56d724ae9b62425ff73f24a8939675 451 Pfam PF13091 PLD-like domain 257 394 4.1E-21 T 28-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 AM393_RS03865 ff56d724ae9b62425ff73f24a8939675 451 PIRSF PIRSF000850 1 451 2.2E-258 T 28-03-2018 AM393_RS08990 b6de143ef7470aa65365ad40d3fb6940 661 SUPERFAMILY SSF53328 1 202 1.96E-57 T 28-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AM393_RS08990 b6de143ef7470aa65365ad40d3fb6940 661 Pfam PF01370 NAD dependent epimerase/dehydratase family 318 566 1.0E-43 T 28-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 AM393_RS08990 b6de143ef7470aa65365ad40d3fb6940 661 SUPERFAMILY SSF51735 317 652 1.97E-72 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS08990 b6de143ef7470aa65365ad40d3fb6940 661 Gene3D G3DSA:3.40.50.720 314 659 2.8E-46 T 28-03-2018 AM393_RS08990 b6de143ef7470aa65365ad40d3fb6940 661 Pfam PF02911 Formyl transferase, C-terminal domain 202 294 5.0E-18 T 28-03-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AM393_RS08990 b6de143ef7470aa65365ad40d3fb6940 661 Gene3D G3DSA:3.10.25.10 203 305 1.8E-22 T 28-03-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AM393_RS08990 b6de143ef7470aa65365ad40d3fb6940 661 SUPERFAMILY SSF50486 204 302 3.3E-24 T 28-03-2018 IPR011034 Formyl transferase, C-terminal-like GO:0003824 AM393_RS08990 b6de143ef7470aa65365ad40d3fb6940 661 Pfam PF00551 Formyl transferase 28 177 2.7E-25 T 28-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AM393_RS08990 b6de143ef7470aa65365ad40d3fb6940 661 Gene3D G3DSA:3.40.50.170 1 202 2.3E-50 T 28-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AM393_RS08990 b6de143ef7470aa65365ad40d3fb6940 661 PIRSF PIRSF036506 1 660 0.0 T 28-03-2018 IPR021168 Bifunctional polymyxin resistance protein, ArnA GO:0016742|GO:0055114 KEGG: 00072+1.1.1.30|KEGG: 00520+2.1.2.13+1.1.1.305|KEGG: 00650+1.1.1.30 AM393_RS08990 b6de143ef7470aa65365ad40d3fb6940 661 Hamap MF_01166 Bifunctional polymyxin resistance protein ArnA [arnA]. 1 660 64.668 T 28-03-2018 IPR021168 Bifunctional polymyxin resistance protein, ArnA GO:0016742|GO:0055114 KEGG: 00072+1.1.1.30|KEGG: 00520+2.1.2.13+1.1.1.305|KEGG: 00650+1.1.1.30 AM393_RS19920 8a0e8c39a792c1c7273f504047722b47 812 Pfam PF00384 Molybdopterin oxidoreductase 117 574 3.3E-108 T 28-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM393_RS19920 8a0e8c39a792c1c7273f504047722b47 812 Gene3D G3DSA:3.30.2070.10 532 579 1.8E-6 T 28-03-2018 AM393_RS19920 8a0e8c39a792c1c7273f504047722b47 812 SUPERFAMILY SSF50692 639 811 2.71E-39 T 28-03-2018 IPR009010 Aspartate decarboxylase-like domain AM393_RS19920 8a0e8c39a792c1c7273f504047722b47 812 Gene3D G3DSA:2.40.40.20 675 812 1.2E-35 T 28-03-2018 AM393_RS19920 8a0e8c39a792c1c7273f504047722b47 812 Gene3D G3DSA:2.20.25.90 48 119 3.4E-18 T 28-03-2018 AM393_RS19920 8a0e8c39a792c1c7273f504047722b47 812 SMART SM00926 54 114 8.4E-9 T 28-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM393_RS19920 8a0e8c39a792c1c7273f504047722b47 812 SUPERFAMILY SSF53706 55 695 1.44E-178 T 28-03-2018 AM393_RS19920 8a0e8c39a792c1c7273f504047722b47 812 Gene3D G3DSA:3.40.228.10 589 674 2.5E-13 T 28-03-2018 AM393_RS19920 8a0e8c39a792c1c7273f504047722b47 812 Gene3D G3DSA:3.40.228.10 203 487 2.6E-63 T 28-03-2018 AM393_RS19920 8a0e8c39a792c1c7273f504047722b47 812 Pfam PF01568 Molydopterin dinucleotide binding domain 693 804 4.9E-28 T 28-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 AM393_RS19920 8a0e8c39a792c1c7273f504047722b47 812 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 515 532 - T 28-03-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 AM393_RS19920 8a0e8c39a792c1c7273f504047722b47 812 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 59 77 - T 28-03-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 AM393_RS19920 8a0e8c39a792c1c7273f504047722b47 812 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 54 114 8.2E-18 T 28-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM393_RS19920 8a0e8c39a792c1c7273f504047722b47 812 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 729 756 - T 28-03-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 AM393_RS19920 8a0e8c39a792c1c7273f504047722b47 812 TIGRFAM TIGR02166 dmsA_ynfE: anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family 14 811 0.0 T 28-03-2018 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE GO:0009389|GO:0030151|GO:0051539|GO:0055114 AM393_RS02325 11cc1a8b462b6d991f775b3511dd329c 239 SUPERFAMILY SSF55120 61 227 1.85E-46 T 28-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM393_RS02325 11cc1a8b462b6d991f775b3511dd329c 239 Pfam PF01479 S4 domain 1 47 1.7E-10 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AM393_RS02325 11cc1a8b462b6d991f775b3511dd329c 239 Pfam PF00849 RNA pseudouridylate synthase 62 192 1.3E-17 T 28-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM393_RS02325 11cc1a8b462b6d991f775b3511dd329c 239 Gene3D G3DSA:3.30.2350.10 63 231 3.6E-36 T 28-03-2018 AM393_RS02325 11cc1a8b462b6d991f775b3511dd329c 239 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 66 224 3.9E-57 T 28-03-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 AM393_RS02325 11cc1a8b462b6d991f775b3511dd329c 239 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 99 113 - T 28-03-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 AM393_RS02325 11cc1a8b462b6d991f775b3511dd329c 239 SMART SM00363 1 60 2.8E-12 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AM393_RS02325 11cc1a8b462b6d991f775b3511dd329c 239 Gene3D G3DSA:3.10.290.10 1 62 3.2E-15 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AM393_RS02325 11cc1a8b462b6d991f775b3511dd329c 239 SUPERFAMILY SSF55174 1 81 9.13E-14 T 28-03-2018 AM393_RS12735 ffebf441c443910afd379f985ad0028b 353 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 73 335 2.7E-97 T 28-03-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 AM393_RS12735 ffebf441c443910afd379f985ad0028b 353 Hamap MF_01820 Putative ribosome biogenesis GTPase RsgA [rsgA]. 40 341 37.523 T 28-03-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 AM393_RS12735 ffebf441c443910afd379f985ad0028b 353 Gene3D G3DSA:1.10.40.50 278 346 3.4E-22 T 28-03-2018 AM393_RS12735 ffebf441c443910afd379f985ad0028b 353 Gene3D G3DSA:3.40.50.300 115 276 1.0E-23 T 28-03-2018 AM393_RS12735 ffebf441c443910afd379f985ad0028b 353 SUPERFAMILY SSF52540 114 340 7.78E-56 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS12735 ffebf441c443910afd379f985ad0028b 353 Gene3D G3DSA:2.40.50.140 35 102 1.4E-19 T 28-03-2018 AM393_RS12735 ffebf441c443910afd379f985ad0028b 353 Pfam PF03193 RsgA GTPase 100 277 2.5E-55 T 28-03-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 AM393_RS14295 d63056c8c4fa61f757fd193b5849850f 289 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 55 100 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM393_RS14295 d63056c8c4fa61f757fd193b5849850f 289 Gene3D G3DSA:1.10.10.60 58 121 1.7E-12 T 28-03-2018 AM393_RS14295 d63056c8c4fa61f757fd193b5849850f 289 Gene3D G3DSA:3.20.80.10 122 289 1.3E-23 T 28-03-2018 IPR011256 Regulatory factor, effector binding domain AM393_RS14295 d63056c8c4fa61f757fd193b5849850f 289 Pfam PF12833 Helix-turn-helix domain 27 105 1.6E-19 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM393_RS14295 d63056c8c4fa61f757fd193b5849850f 289 Gene3D G3DSA:1.10.10.60 1 57 2.3E-13 T 28-03-2018 AM393_RS14295 d63056c8c4fa61f757fd193b5849850f 289 SMART SM00871 126 288 8.4E-15 T 28-03-2018 IPR010499 Bacterial transcription activator, effector binding AM393_RS14295 d63056c8c4fa61f757fd193b5849850f 289 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 88 104 2.3E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM393_RS14295 d63056c8c4fa61f757fd193b5849850f 289 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 73 88 2.3E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM393_RS14295 d63056c8c4fa61f757fd193b5849850f 289 Pfam PF06445 GyrI-like small molecule binding domain 127 288 1.5E-18 T 28-03-2018 IPR029442 GyrI-like small molecule binding domain AM393_RS14295 d63056c8c4fa61f757fd193b5849850f 289 SUPERFAMILY SSF55136 122 288 1.7E-49 T 28-03-2018 AM393_RS14295 d63056c8c4fa61f757fd193b5849850f 289 SMART SM00342 21 104 4.8E-31 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM393_RS14295 d63056c8c4fa61f757fd193b5849850f 289 SUPERFAMILY SSF46689 6 55 2.39E-11 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS14295 d63056c8c4fa61f757fd193b5849850f 289 SUPERFAMILY SSF46689 57 109 8.96E-12 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS08395 45b47cbfb4f83933a94aaab3ce4e6031 276 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 161 247 9.3E-28 T 28-03-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AM393_RS08395 45b47cbfb4f83933a94aaab3ce4e6031 276 Gene3D G3DSA:3.10.50.40 135 251 1.9E-42 T 28-03-2018 AM393_RS08395 45b47cbfb4f83933a94aaab3ce4e6031 276 SUPERFAMILY SSF54534 42 250 1.3E-64 T 28-03-2018 AM393_RS08395 45b47cbfb4f83933a94aaab3ce4e6031 276 Gene3D G3DSA:1.10.287.460 27 134 8.2E-28 T 28-03-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 AM393_RS08395 45b47cbfb4f83933a94aaab3ce4e6031 276 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 33 153 1.3E-35 T 28-03-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 AM393_RS20955 cda107b1f6fd63856b33ce9b34813778 120 Gene3D G3DSA:2.60.120.10 1 100 3.9E-20 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AM393_RS20955 cda107b1f6fd63856b33ce9b34813778 120 Pfam PF07883 Cupin domain 39 96 9.8E-11 T 28-03-2018 IPR013096 Cupin 2, conserved barrel AM393_RS20955 cda107b1f6fd63856b33ce9b34813778 120 SUPERFAMILY SSF51182 2 106 3.67E-22 T 28-03-2018 IPR011051 RmlC-like cupin domain AM393_RS21190 0090fe0df8b4b29537b4ac15247a1612 139 Pfam PF00717 Peptidase S24-like 57 119 8.6E-12 T 28-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AM393_RS21190 0090fe0df8b4b29537b4ac15247a1612 139 SUPERFAMILY SSF51306 13 136 2.27E-33 T 28-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AM393_RS21190 0090fe0df8b4b29537b4ac15247a1612 139 Gene3D G3DSA:2.10.109.10 21 138 4.2E-25 T 28-03-2018 AM393_RS21190 0090fe0df8b4b29537b4ac15247a1612 139 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 63 74 3.9E-9 T 28-03-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 AM393_RS21190 0090fe0df8b4b29537b4ac15247a1612 139 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 91 103 3.9E-9 T 28-03-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 AM393_RS21190 0090fe0df8b4b29537b4ac15247a1612 139 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 52 62 3.9E-9 T 28-03-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 AM393_RS14110 d937de999db73c1073529289cd516c56 293 Gene3D G3DSA:1.10.10.60 240 292 1.1E-12 T 28-03-2018 AM393_RS14110 d937de999db73c1073529289cd516c56 293 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 254 269 7.5E-6 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM393_RS14110 d937de999db73c1073529289cd516c56 293 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 269 285 7.5E-6 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM393_RS14110 d937de999db73c1073529289cd516c56 293 Gene3D G3DSA:2.60.120.280 22 174 2.4E-15 T 28-03-2018 AM393_RS14110 d937de999db73c1073529289cd516c56 293 SUPERFAMILY SSF46689 240 288 4.93E-11 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS14110 d937de999db73c1073529289cd516c56 293 SMART SM00342 202 285 1.2E-21 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM393_RS14110 d937de999db73c1073529289cd516c56 293 Pfam PF12833 Helix-turn-helix domain 208 286 2.0E-18 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM393_RS14110 d937de999db73c1073529289cd516c56 293 Gene3D G3DSA:1.10.10.60 177 238 3.2E-8 T 28-03-2018 AM393_RS14110 d937de999db73c1073529289cd516c56 293 SUPERFAMILY SSF51182 41 116 1.33E-7 T 28-03-2018 IPR011051 RmlC-like cupin domain AM393_RS08705 8e0d398b0659d3fcfa73b2500765c64d 276 Pfam PF01694 Rhomboid family 132 267 3.4E-27 T 28-03-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 AM393_RS08705 8e0d398b0659d3fcfa73b2500765c64d 276 SUPERFAMILY SSF144091 92 267 1.57E-43 T 28-03-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 AM393_RS08705 8e0d398b0659d3fcfa73b2500765c64d 276 Gene3D G3DSA:1.20.1540.10 91 268 6.6E-37 T 28-03-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 AM393_RS08705 8e0d398b0659d3fcfa73b2500765c64d 276 Pfam PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease 1 82 1.4E-29 T 28-03-2018 IPR022732 Peptidase S54, GlpG peptidase, N-terminal GO:0004252|GO:0016021 AM393_RS08705 8e0d398b0659d3fcfa73b2500765c64d 276 TIGRFAM TIGR04239 rhombo_GlpG: rhomboid family protease GlpG 4 270 2.8E-115 T 28-03-2018 IPR023662 Rhomboid protease GlpG GO:0004252|GO:0006508|GO:0016021 AM393_RS08705 8e0d398b0659d3fcfa73b2500765c64d 276 Hamap MF_01594 Rhomboid protease GlpG [glpG]. 1 274 45.315 T 28-03-2018 IPR023662 Rhomboid protease GlpG GO:0004252|GO:0006508|GO:0016021 AM393_RS28920 a47e7568518d6227d24c732f328a36ac 234 Pfam PF13610 DDE domain 75 212 8.6E-49 T 28-03-2018 IPR032874 DDE domain AM393_RS28920 a47e7568518d6227d24c732f328a36ac 234 SUPERFAMILY SSF53098 75 191 3.29E-7 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM393_RS28920 a47e7568518d6227d24c732f328a36ac 234 Gene3D G3DSA:3.30.420.10 72 210 1.3E-12 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM393_RS28920 a47e7568518d6227d24c732f328a36ac 234 Gene3D G3DSA:1.10.10.10 4 61 5.2E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS28900 a47e7568518d6227d24c732f328a36ac 234 Pfam PF13610 DDE domain 75 212 8.6E-49 T 28-03-2018 IPR032874 DDE domain AM393_RS28900 a47e7568518d6227d24c732f328a36ac 234 SUPERFAMILY SSF53098 75 191 3.29E-7 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM393_RS28900 a47e7568518d6227d24c732f328a36ac 234 Gene3D G3DSA:3.30.420.10 72 210 1.3E-12 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM393_RS28900 a47e7568518d6227d24c732f328a36ac 234 Gene3D G3DSA:1.10.10.10 4 61 5.2E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS27810 a47e7568518d6227d24c732f328a36ac 234 Pfam PF13610 DDE domain 75 212 8.6E-49 T 28-03-2018 IPR032874 DDE domain AM393_RS27810 a47e7568518d6227d24c732f328a36ac 234 SUPERFAMILY SSF53098 75 191 3.29E-7 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM393_RS27810 a47e7568518d6227d24c732f328a36ac 234 Gene3D G3DSA:3.30.420.10 72 210 1.3E-12 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM393_RS27810 a47e7568518d6227d24c732f328a36ac 234 Gene3D G3DSA:1.10.10.10 4 61 5.2E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS11805 dd21064b923ca067c4a3b444e58a075c 90 SUPERFAMILY SSF47729 1 90 8.1E-33 T 28-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 AM393_RS11805 dd21064b923ca067c4a3b444e58a075c 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 6.8E-33 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AM393_RS11805 dd21064b923ca067c4a3b444e58a075c 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 2.0E-19 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AM393_RS11805 dd21064b923ca067c4a3b444e58a075c 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 2.0E-19 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AM393_RS11805 dd21064b923ca067c4a3b444e58a075c 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 2.0E-19 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AM393_RS11805 dd21064b923ca067c4a3b444e58a075c 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 28-03-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 AM393_RS11805 dd21064b923ca067c4a3b444e58a075c 90 Gene3D G3DSA:4.10.520.10 1 90 9.1E-34 T 28-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 AM393_RS11805 dd21064b923ca067c4a3b444e58a075c 90 SMART SM00411 1 90 4.2E-44 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AM393_RS10540 59c87da9c5db944434d7bde2921fbee5 207 Gene3D G3DSA:3.40.50.150 1 207 9.2E-38 T 28-03-2018 AM393_RS10540 59c87da9c5db944434d7bde2921fbee5 207 PIRSF PIRSF003078 1 207 2.9E-66 T 28-03-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 AM393_RS10540 59c87da9c5db944434d7bde2921fbee5 207 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 25 203 4.2E-58 T 28-03-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 AM393_RS10540 59c87da9c5db944434d7bde2921fbee5 207 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 13 201 28.419 T 28-03-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 AM393_RS10540 59c87da9c5db944434d7bde2921fbee5 207 Pfam PF02527 rRNA small subunit methyltransferase G 20 200 8.3E-64 T 28-03-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 AM393_RS10540 59c87da9c5db944434d7bde2921fbee5 207 SUPERFAMILY SSF53335 4 205 7.67E-44 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM393_RS03385 25c38eee339d0d85a6acb21279d840f8 292 SMART SM01130 1 290 1.8E-143 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AM393_RS03385 25c38eee339d0d85a6acb21279d840f8 292 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 38 55 - T 28-03-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AM393_RS03385 25c38eee339d0d85a6acb21279d840f8 292 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 4 288 6.3E-124 T 28-03-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AM393_RS03385 25c38eee339d0d85a6acb21279d840f8 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 35 56 3.8E-35 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AM393_RS03385 25c38eee339d0d85a6acb21279d840f8 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 128 145 3.8E-35 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AM393_RS03385 25c38eee339d0d85a6acb21279d840f8 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 71 89 3.8E-35 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AM393_RS03385 25c38eee339d0d85a6acb21279d840f8 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 103 119 3.8E-35 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AM393_RS03385 25c38eee339d0d85a6acb21279d840f8 292 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 1 288 65.806 T 28-03-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AM393_RS03385 25c38eee339d0d85a6acb21279d840f8 292 SUPERFAMILY SSF51569 1 292 9.42E-101 T 28-03-2018 AM393_RS03385 25c38eee339d0d85a6acb21279d840f8 292 Gene3D G3DSA:3.20.20.70 1 292 7.2E-93 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM393_RS03385 25c38eee339d0d85a6acb21279d840f8 292 PIRSF PIRSF001365 1 292 1.2E-96 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AM393_RS03385 25c38eee339d0d85a6acb21279d840f8 292 Pfam PF00701 Dihydrodipicolinate synthetase family 2 288 2.0E-121 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AM393_RS03385 25c38eee339d0d85a6acb21279d840f8 292 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 133 163 - T 28-03-2018 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 AM393_RS08305 707f49a5e41dfbeb219aeb4bac8402d7 92 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 28-03-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM393_RS08305 707f49a5e41dfbeb219aeb4bac8402d7 92 Pfam PF00203 Ribosomal protein S19 3 83 2.2E-35 T 28-03-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM393_RS08305 707f49a5e41dfbeb219aeb4bac8402d7 92 PIRSF PIRSF002144 1 92 3.5E-31 T 28-03-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM393_RS08305 707f49a5e41dfbeb219aeb4bac8402d7 92 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 91 1.6E-45 T 28-03-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 AM393_RS08305 707f49a5e41dfbeb219aeb4bac8402d7 92 SUPERFAMILY SSF54570 3 84 6.02E-35 T 28-03-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM393_RS08305 707f49a5e41dfbeb219aeb4bac8402d7 92 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 1.1E-24 T 28-03-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM393_RS08305 707f49a5e41dfbeb219aeb4bac8402d7 92 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 1.1E-24 T 28-03-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM393_RS08305 707f49a5e41dfbeb219aeb4bac8402d7 92 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 1.1E-24 T 28-03-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM393_RS08305 707f49a5e41dfbeb219aeb4bac8402d7 92 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.439 T 28-03-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM393_RS08305 707f49a5e41dfbeb219aeb4bac8402d7 92 Gene3D G3DSA:3.30.860.10 1 92 6.8E-40 T 28-03-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM393_RS17315 2d3cfe8d2f512b62c5c513eff7b08f22 220 SMART SM00421 143 200 8.9E-4 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS17315 2d3cfe8d2f512b62c5c513eff7b08f22 220 Gene3D G3DSA:1.10.10.10 85 199 8.0E-6 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS17315 2d3cfe8d2f512b62c5c513eff7b08f22 220 SUPERFAMILY SSF46894 138 201 2.01E-8 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM393_RS17315 2d3cfe8d2f512b62c5c513eff7b08f22 220 Pfam PF00196 Bacterial regulatory proteins, luxR family 145 198 9.3E-6 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS24875 31ec1d762c58a21550e6427a76a4d062 257 SUPERFAMILY SSF51735 5 254 1.01E-66 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS24875 31ec1d762c58a21550e6427a76a4d062 257 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 254 5.2E-52 T 28-03-2018 AM393_RS24875 31ec1d762c58a21550e6427a76a4d062 257 Gene3D G3DSA:3.40.50.720 1 255 4.2E-59 T 28-03-2018 AM393_RS24875 31ec1d762c58a21550e6427a76a4d062 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.5E-38 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS24875 31ec1d762c58a21550e6427a76a4d062 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 1.5E-38 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS24875 31ec1d762c58a21550e6427a76a4d062 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 1.5E-38 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS24875 31ec1d762c58a21550e6427a76a4d062 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 219 239 1.5E-38 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS24875 31ec1d762c58a21550e6427a76a4d062 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 1.5E-38 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS24875 31ec1d762c58a21550e6427a76a4d062 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 1.5E-38 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS24875 31ec1d762c58a21550e6427a76a4d062 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 8.7E-13 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS24875 31ec1d762c58a21550e6427a76a4d062 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 8.7E-13 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS24875 31ec1d762c58a21550e6427a76a4d062 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 8.7E-13 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS24875 31ec1d762c58a21550e6427a76a4d062 257 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM393_RS24875 31ec1d762c58a21550e6427a76a4d062 257 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 185 0.004 T 28-03-2018 AM393_RS06795 828c98038a57e6a15050074866f24dee 210 Gene3D G3DSA:3.90.79.10 1 209 4.3E-45 T 28-03-2018 AM393_RS06795 828c98038a57e6a15050074866f24dee 210 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 14 199 1.1E-80 T 28-03-2018 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 Reactome: R-HSA-480985 AM393_RS06795 828c98038a57e6a15050074866f24dee 210 ProSitePatterns PS00893 Nudix box signature. 97 118 - T 28-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AM393_RS06795 828c98038a57e6a15050074866f24dee 210 Pfam PF00293 NUDIX domain 59 179 2.9E-12 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AM393_RS06795 828c98038a57e6a15050074866f24dee 210 SUPERFAMILY SSF55811 6 208 1.62E-52 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 AM393_RS02185 2fbe8826af4571daabe63b30e5f67be7 222 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 40 220 1.2E-85 T 28-03-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 AM393_RS02185 2fbe8826af4571daabe63b30e5f67be7 222 Pfam PF01227 GTP cyclohydrolase I 41 218 1.1E-62 T 28-03-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 AM393_RS02185 2fbe8826af4571daabe63b30e5f67be7 222 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 98 114 - T 28-03-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 AM393_RS02185 2fbe8826af4571daabe63b30e5f67be7 222 SUPERFAMILY SSF55620 4 221 1.63E-76 T 28-03-2018 AM393_RS02185 2fbe8826af4571daabe63b30e5f67be7 222 Gene3D G3DSA:3.30.1130.10 89 221 3.8E-46 T 28-03-2018 AM393_RS02185 2fbe8826af4571daabe63b30e5f67be7 222 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 36 219 33.674 T 28-03-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 AM393_RS02185 2fbe8826af4571daabe63b30e5f67be7 222 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 146 156 - T 28-03-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 AM393_RS02185 2fbe8826af4571daabe63b30e5f67be7 222 Gene3D G3DSA:1.10.286.10 7 85 2.7E-20 T 28-03-2018 AM393_RS05575 a334d1a6af187aea98d8185b3e2c3473 392 Pfam PF00108 Thiolase, N-terminal domain 4 261 2.0E-102 T 28-03-2018 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 AM393_RS05575 a334d1a6af187aea98d8185b3e2c3473 392 Gene3D G3DSA:3.40.47.10 1 162 2.3E-40 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM393_RS05575 a334d1a6af187aea98d8185b3e2c3473 392 ProSitePatterns PS00737 Thiolases signature 2. 338 354 - T 28-03-2018 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 AM393_RS05575 a334d1a6af187aea98d8185b3e2c3473 392 SUPERFAMILY SSF53901 3 269 5.76E-84 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM393_RS05575 a334d1a6af187aea98d8185b3e2c3473 392 Pfam PF02803 Thiolase, C-terminal domain 270 391 7.1E-51 T 28-03-2018 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 AM393_RS05575 a334d1a6af187aea98d8185b3e2c3473 392 ProSitePatterns PS00099 Thiolases active site. 373 386 - T 28-03-2018 IPR020610 Thiolase, active site GO:0008152|GO:0016747 AM393_RS05575 a334d1a6af187aea98d8185b3e2c3473 392 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 390 1.9E-143 T 28-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 AM393_RS05575 a334d1a6af187aea98d8185b3e2c3473 392 Gene3D G3DSA:3.40.47.10 163 262 1.2E-22 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM393_RS05575 a334d1a6af187aea98d8185b3e2c3473 392 Gene3D G3DSA:3.40.47.10 263 389 9.8E-36 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM393_RS05575 a334d1a6af187aea98d8185b3e2c3473 392 PIRSF PIRSF000429 1 392 6.4E-131 T 28-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 AM393_RS05575 a334d1a6af187aea98d8185b3e2c3473 392 SUPERFAMILY SSF53901 271 391 4.14E-43 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM393_RS05575 a334d1a6af187aea98d8185b3e2c3473 392 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 28-03-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 AM393_RS12200 dd1fa83e22f83625d43a3cfc2caf4463 343 SMART SM00382 28 211 3.0E-16 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS12200 dd1fa83e22f83625d43a3cfc2caf4463 343 Pfam PF00005 ABC transporter 19 161 1.3E-33 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS12200 dd1fa83e22f83625d43a3cfc2caf4463 343 Gene3D G3DSA:3.40.50.300 1 275 6.7E-74 T 28-03-2018 AM393_RS12200 dd1fa83e22f83625d43a3cfc2caf4463 343 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS12200 dd1fa83e22f83625d43a3cfc2caf4463 343 SUPERFAMILY SSF52540 4 239 1.09E-81 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS25095 7bbee45327bcd9c3f7374222f1156c0f 99 TIGRFAM TIGR00743 TIGR00743: conserved hypothetical protein 4 96 5.0E-28 T 28-03-2018 IPR005272 Conserved hypothetical protein CHP00743 AM393_RS25095 7bbee45327bcd9c3f7374222f1156c0f 99 Pfam PF04175 Protein of unknown function (DUF406) 5 96 1.3E-29 T 28-03-2018 IPR005272 Conserved hypothetical protein CHP00743 AM393_RS25095 7bbee45327bcd9c3f7374222f1156c0f 99 Gene3D G3DSA:3.30.70.860 15 96 2.3E-24 T 28-03-2018 IPR035571 UPF0234/UPF0381 domain AM393_RS08645 d7dd42cd95d9075397c4be1d707e423a 772 Pfam PF07670 Nucleoside recognition 512 689 4.1E-37 T 28-03-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 AM393_RS08645 d7dd42cd95d9075397c4be1d707e423a 772 Pfam PF07670 Nucleoside recognition 353 443 6.2E-13 T 28-03-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 AM393_RS08645 d7dd42cd95d9075397c4be1d707e423a 772 Pfam PF02421 Ferrous iron transport protein B 5 160 8.2E-64 T 28-03-2018 IPR030389 FeoB-type guanine nucleotide-binding (G) domain GO:0005525 AM393_RS08645 d7dd42cd95d9075397c4be1d707e423a 772 Pfam PF07664 Ferrous iron transport protein B C terminus 455 507 5.8E-22 T 28-03-2018 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 AM393_RS08645 d7dd42cd95d9075397c4be1d707e423a 772 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 27 45 2.2E-6 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 AM393_RS08645 d7dd42cd95d9075397c4be1d707e423a 772 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 6 26 2.2E-6 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 AM393_RS08645 d7dd42cd95d9075397c4be1d707e423a 772 Gene3D G3DSA:3.40.50.300 2 311 2.6E-34 T 28-03-2018 AM393_RS08645 d7dd42cd95d9075397c4be1d707e423a 772 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 10 687 3.4E-241 T 28-03-2018 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 AM393_RS08645 d7dd42cd95d9075397c4be1d707e423a 772 SUPERFAMILY SSF52540 4 167 1.01E-39 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS05745 0c4e596c5e98c7eeb1233be33a423373 482 Gene3D G3DSA:1.20.1600.10 25 482 8.3E-66 T 28-03-2018 AM393_RS05745 0c4e596c5e98c7eeb1233be33a423373 482 Pfam PF02321 Outer membrane efflux protein 71 268 3.8E-20 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AM393_RS05745 0c4e596c5e98c7eeb1233be33a423373 482 Pfam PF02321 Outer membrane efflux protein 297 475 2.5E-14 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AM393_RS05745 0c4e596c5e98c7eeb1233be33a423373 482 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 18 478 2.7E-82 T 28-03-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 AM393_RS05745 0c4e596c5e98c7eeb1233be33a423373 482 SUPERFAMILY SSF56954 3 479 3.27E-78 T 28-03-2018 AM393_RS17820 ad4b2884305a6e59f4a69e9ff8334269 253 PIRSF PIRSF039085 3 253 5.1E-112 T 28-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 AM393_RS17820 ad4b2884305a6e59f4a69e9ff8334269 253 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS17820 ad4b2884305a6e59f4a69e9ff8334269 253 SUPERFAMILY SSF52540 7 248 1.24E-75 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS17820 ad4b2884305a6e59f4a69e9ff8334269 253 SMART SM00382 31 226 1.1E-13 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS17820 ad4b2884305a6e59f4a69e9ff8334269 253 Pfam PF00005 ABC transporter 22 178 5.7E-35 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS17820 ad4b2884305a6e59f4a69e9ff8334269 253 Gene3D G3DSA:3.40.50.300 4 253 8.8E-71 T 28-03-2018 AM393_RS23000 aa04cf9c63ef7d9cdc2b91db44877d61 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 1.1E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS23000 aa04cf9c63ef7d9cdc2b91db44877d61 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 1.1E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS23000 aa04cf9c63ef7d9cdc2b91db44877d61 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 1.1E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS23000 aa04cf9c63ef7d9cdc2b91db44877d61 302 SUPERFAMILY SSF46785 5 114 8.18E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS23000 aa04cf9c63ef7d9cdc2b91db44877d61 302 Gene3D G3DSA:3.40.190.10 184 269 2.4E-15 T 28-03-2018 AM393_RS23000 aa04cf9c63ef7d9cdc2b91db44877d61 302 SUPERFAMILY SSF53850 92 300 3.8E-39 T 28-03-2018 AM393_RS23000 aa04cf9c63ef7d9cdc2b91db44877d61 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 7.4E-19 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS23000 aa04cf9c63ef7d9cdc2b91db44877d61 302 Pfam PF03466 LysR substrate binding domain 91 296 2.3E-37 T 28-03-2018 IPR005119 LysR, substrate-binding AM393_RS23000 aa04cf9c63ef7d9cdc2b91db44877d61 302 Gene3D G3DSA:3.40.190.10 96 183 4.6E-19 T 28-03-2018 AM393_RS23000 aa04cf9c63ef7d9cdc2b91db44877d61 302 Gene3D G3DSA:1.10.10.10 5 95 3.7E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS15745 b7f086629cb214d8afed03f0226c7e5b 512 Gene3D G3DSA:3.30.420.40 1 248 7.2E-61 T 28-03-2018 AM393_RS15745 b7f086629cb214d8afed03f0226c7e5b 512 SUPERFAMILY SSF53067 5 254 4.27E-56 T 28-03-2018 AM393_RS15745 b7f086629cb214d8afed03f0226c7e5b 512 Gene3D G3DSA:3.30.420.40 249 511 6.4E-46 T 28-03-2018 AM393_RS15745 b7f086629cb214d8afed03f0226c7e5b 512 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 366 386 - T 28-03-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AM393_RS15745 b7f086629cb214d8afed03f0226c7e5b 512 SUPERFAMILY SSF53067 261 495 3.24E-49 T 28-03-2018 AM393_RS15745 b7f086629cb214d8afed03f0226c7e5b 512 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 262 454 6.6E-29 T 28-03-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 AM393_RS15745 b7f086629cb214d8afed03f0226c7e5b 512 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 5 250 7.5E-63 T 28-03-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 AM393_RS15745 b7f086629cb214d8afed03f0226c7e5b 512 PIRSF PIRSF000538 3 506 1.3E-97 T 28-03-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AM393_RS27965 c5dc2a073a4b5a1cea91196b87f0bf33 769 SUPERFAMILY SSF52540 185 572 1.95E-58 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS27965 c5dc2a073a4b5a1cea91196b87f0bf33 769 Pfam PF10412 Type IV secretion-system coupling protein DNA-binding domain 172 560 2.2E-122 T 28-03-2018 IPR019476 Type IV secretion system coupling protein TraD, DNA-binding domain AM393_RS27965 c5dc2a073a4b5a1cea91196b87f0bf33 769 Gene3D G3DSA:3.40.50.300 131 574 9.9E-39 T 28-03-2018 AM393_RS27965 c5dc2a073a4b5a1cea91196b87f0bf33 769 TIGRFAM TIGR02759 TraD_Ftype: type IV conjugative transfer system coupling protein TraD 8 576 1.7E-240 T 28-03-2018 IPR014128 Type IV conjugative transfer system, coupling protein TraD GO:0000746 AM393_RS27965 c5dc2a073a4b5a1cea91196b87f0bf33 769 Pfam PF12615 F sex factor protein N terminal 31 128 1.2E-29 T 28-03-2018 IPR022585 TraD coupling protein, N-terminal AM393_RS11515 c53cc9334b8d95c468faddd8d025bf55 482 Gene3D G3DSA:1.20.5.340 148 299 6.0E-24 T 28-03-2018 AM393_RS11515 c53cc9334b8d95c468faddd8d025bf55 482 Pfam PF02646 RmuC family 137 433 1.4E-106 T 28-03-2018 IPR003798 DNA recombination RmuC AM393_RS06025 013de8c96365d37da043a5298742f467 663 ProSitePatterns PS00801 Transketolase signature 1. 12 32 - T 28-03-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AM393_RS06025 013de8c96365d37da043a5298742f467 663 SUPERFAMILY SSF52518 5 331 1.18E-122 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold AM393_RS06025 013de8c96365d37da043a5298742f467 663 Gene3D G3DSA:3.40.50.970 364 540 4.5E-41 T 28-03-2018 AM393_RS06025 013de8c96365d37da043a5298742f467 663 Pfam PF02780 Transketolase, C-terminal domain 540 655 2.5E-20 T 28-03-2018 IPR033248 Transketolase, C-terminal domain AM393_RS06025 013de8c96365d37da043a5298742f467 663 SMART SM00861 355 525 1.2E-65 T 28-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AM393_RS06025 013de8c96365d37da043a5298742f467 663 SUPERFAMILY SSF52922 533 663 3.53E-44 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AM393_RS06025 013de8c96365d37da043a5298742f467 663 Pfam PF02779 Transketolase, pyrimidine binding domain 354 524 5.6E-44 T 28-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AM393_RS06025 013de8c96365d37da043a5298742f467 663 TIGRFAM TIGR00232 tktlase_bact: transketolase 5 662 0.0 T 28-03-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 AM393_RS06025 013de8c96365d37da043a5298742f467 663 Gene3D G3DSA:3.40.50.970 1 363 1.7E-128 T 28-03-2018 AM393_RS06025 013de8c96365d37da043a5298742f467 663 Gene3D G3DSA:3.40.50.920 541 663 2.8E-33 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AM393_RS06025 013de8c96365d37da043a5298742f467 663 SUPERFAMILY SSF52518 336 526 3.04E-67 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold AM393_RS06025 013de8c96365d37da043a5298742f467 663 ProSitePatterns PS00802 Transketolase signature 2. 467 483 - T 28-03-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AM393_RS06025 013de8c96365d37da043a5298742f467 663 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 4 334 4.5E-173 T 28-03-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AM393_RS21865 37f959809b89225e221bb2d45900e453 72 Pfam PF09584 Phage shock protein PspD (Phageshock_PspD) 11 70 7.0E-32 T 28-03-2018 IPR014321 Phage shock protein, PspD AM393_RS21865 37f959809b89225e221bb2d45900e453 72 TIGRFAM TIGR02979 phageshock_pspD: phage shock protein PspD 13 69 1.1E-29 T 28-03-2018 IPR014321 Phage shock protein, PspD AM393_RS04470 0791aa8581afddbd9e044da67c8fcbf8 257 Gene3D G3DSA:3.40.50.1360 72 239 8.7E-39 T 28-03-2018 AM393_RS04470 0791aa8581afddbd9e044da67c8fcbf8 257 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 6.8E-5 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM393_RS04470 0791aa8581afddbd9e044da67c8fcbf8 257 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 6.8E-5 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM393_RS04470 0791aa8581afddbd9e044da67c8fcbf8 257 Pfam PF00455 DeoR C terminal sensor domain 74 231 7.5E-52 T 28-03-2018 IPR014036 DeoR C-terminal sensor domain AM393_RS04470 0791aa8581afddbd9e044da67c8fcbf8 257 SMART SM01134 72 233 9.5E-73 T 28-03-2018 AM393_RS04470 0791aa8581afddbd9e044da67c8fcbf8 257 SMART SM00420 6 58 3.6E-22 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM393_RS04470 0791aa8581afddbd9e044da67c8fcbf8 257 SUPERFAMILY SSF100950 73 233 1.26E-36 T 28-03-2018 AM393_RS04470 0791aa8581afddbd9e044da67c8fcbf8 257 Pfam PF08220 DeoR-like helix-turn-helix domain 6 60 1.1E-20 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM393_RS04470 0791aa8581afddbd9e044da67c8fcbf8 257 Gene3D G3DSA:1.10.10.10 1 59 2.4E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS04470 0791aa8581afddbd9e044da67c8fcbf8 257 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 28-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 AM393_RS04470 0791aa8581afddbd9e044da67c8fcbf8 257 SUPERFAMILY SSF46785 4 64 6.72E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS20950 0bd5d8c1e11f59db4a221528cafc331b 268 SUPERFAMILY SSF46689 217 265 4.03E-7 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS20950 0bd5d8c1e11f59db4a221528cafc331b 268 SUPERFAMILY SSF46689 165 214 1.84E-7 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS20950 0bd5d8c1e11f59db4a221528cafc331b 268 Gene3D G3DSA:1.10.10.60 177 222 3.3E-7 T 28-03-2018 AM393_RS20950 0bd5d8c1e11f59db4a221528cafc331b 268 Pfam PF02311 AraC-like ligand binding domain 20 145 2.9E-22 T 28-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AM393_RS20950 0bd5d8c1e11f59db4a221528cafc331b 268 SMART SM00342 181 263 4.1E-13 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM393_RS20950 0bd5d8c1e11f59db4a221528cafc331b 268 Pfam PF12833 Helix-turn-helix domain 189 264 1.7E-16 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM393_RS20950 0bd5d8c1e11f59db4a221528cafc331b 268 SUPERFAMILY SSF51215 23 131 9.55E-20 T 28-03-2018 AM393_RS20950 0bd5d8c1e11f59db4a221528cafc331b 268 Gene3D G3DSA:2.60.120.280 17 176 8.4E-9 T 28-03-2018 AM393_RS20950 0bd5d8c1e11f59db4a221528cafc331b 268 Gene3D G3DSA:1.10.10.60 223 268 4.1E-11 T 28-03-2018 AM393_RS09865 d36f24e48f13958992460bad0fd96997 503 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 262 451 4.5E-62 T 28-03-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 AM393_RS09865 d36f24e48f13958992460bad0fd96997 503 Hamap MF_00186 Glycerol kinase [glpK]. 4 498 60.164 T 28-03-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 AM393_RS09865 d36f24e48f13958992460bad0fd96997 503 SUPERFAMILY SSF53067 256 498 1.05E-87 T 28-03-2018 AM393_RS09865 d36f24e48f13958992460bad0fd96997 503 Gene3D G3DSA:3.30.420.40 250 503 1.9E-80 T 28-03-2018 AM393_RS09865 d36f24e48f13958992460bad0fd96997 503 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 136 148 - T 28-03-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AM393_RS09865 d36f24e48f13958992460bad0fd96997 503 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 6 253 3.0E-93 T 28-03-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 AM393_RS09865 d36f24e48f13958992460bad0fd96997 503 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 5 497 2.4E-231 T 28-03-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 AM393_RS09865 d36f24e48f13958992460bad0fd96997 503 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 363 383 - T 28-03-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AM393_RS09865 d36f24e48f13958992460bad0fd96997 503 Gene3D G3DSA:3.30.420.40 1 249 5.5E-90 T 28-03-2018 AM393_RS09865 d36f24e48f13958992460bad0fd96997 503 PIRSF PIRSF000538 4 503 3.4E-179 T 28-03-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AM393_RS09865 d36f24e48f13958992460bad0fd96997 503 SUPERFAMILY SSF53067 5 256 4.53E-97 T 28-03-2018 AM393_RS25440 dba529fb317933924c75bbe317a0aca5 286 SUPERFAMILY SSF53613 1 278 9.67E-76 T 28-03-2018 IPR029056 Ribokinase-like AM393_RS25440 dba529fb317933924c75bbe317a0aca5 286 Pfam PF08543 Phosphomethylpyrimidine kinase 74 259 1.9E-15 T 28-03-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 AM393_RS25440 dba529fb317933924c75bbe317a0aca5 286 TIGRFAM TIGR00687 pyridox_kin: pyridoxal kinase 1 285 6.9E-138 T 28-03-2018 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-6798695|Reactome: R-HSA-964975 AM393_RS25440 dba529fb317933924c75bbe317a0aca5 286 Gene3D G3DSA:3.40.1190.20 1 286 1.9E-63 T 28-03-2018 IPR029056 Ribokinase-like AM393_RS25440 dba529fb317933924c75bbe317a0aca5 286 Hamap MF_01639 Pyridoxal kinase PdxY [pdxY]. 1 286 54.049 T 28-03-2018 IPR023685 Pyridoxal kinase PdxY GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282 AM393_RS08460 c9b73d94c2816acb50d358a803904515 210 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 71 89 - T 28-03-2018 IPR018488 Cyclic nucleotide-binding, conserved site AM393_RS08460 c9b73d94c2816acb50d358a803904515 210 SMART SM00100 2 122 1.1E-26 T 28-03-2018 IPR000595 Cyclic nucleotide-binding domain AM393_RS08460 c9b73d94c2816acb50d358a803904515 210 SUPERFAMILY SSF51206 8 136 1.03E-35 T 28-03-2018 IPR018490 Cyclic nucleotide-binding-like AM393_RS08460 c9b73d94c2816acb50d358a803904515 210 ProSitePatterns PS00042 Crp-type HTH domain signature. 168 191 - T 28-03-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 AM393_RS08460 c9b73d94c2816acb50d358a803904515 210 Pfam PF00325 Bacterial regulatory proteins, crp family 166 197 1.8E-15 T 28-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AM393_RS08460 c9b73d94c2816acb50d358a803904515 210 Gene3D G3DSA:1.10.10.10 145 210 9.9E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS08460 c9b73d94c2816acb50d358a803904515 210 ProSitePatterns PS00888 Cyclic nucleotide-binding domain signature 1. 30 46 - T 28-03-2018 IPR018488 Cyclic nucleotide-binding, conserved site AM393_RS08460 c9b73d94c2816acb50d358a803904515 210 SUPERFAMILY SSF46785 139 207 3.64E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS08460 c9b73d94c2816acb50d358a803904515 210 Pfam PF00027 Cyclic nucleotide-binding domain 23 109 6.5E-24 T 28-03-2018 IPR000595 Cyclic nucleotide-binding domain AM393_RS08460 c9b73d94c2816acb50d358a803904515 210 Gene3D G3DSA:2.60.120.10 4 144 6.0E-34 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AM393_RS08460 c9b73d94c2816acb50d358a803904515 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 166 182 8.8E-11 T 28-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AM393_RS08460 c9b73d94c2816acb50d358a803904515 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 182 197 8.8E-11 T 28-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AM393_RS08460 c9b73d94c2816acb50d358a803904515 210 SMART SM00419 160 208 4.5E-17 T 28-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AM393_RS23740 092bc1ed69335063b7ea69d6614d654d 345 Gene3D G3DSA:3.90.380.10 127 338 3.1E-38 T 28-03-2018 AM393_RS23740 092bc1ed69335063b7ea69d6614d654d 345 ProSitePatterns PS00570 Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 65 87 - T 28-03-2018 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site GO:0005506|GO:0016705|GO:0051537|GO:0055114 AM393_RS23740 092bc1ed69335063b7ea69d6614d654d 345 SUPERFAMILY SSF55961 133 338 5.27E-26 T 28-03-2018 AM393_RS23740 092bc1ed69335063b7ea69d6614d654d 345 Pfam PF00355 Rieske [2Fe-2S] domain 26 104 6.0E-17 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AM393_RS23740 092bc1ed69335063b7ea69d6614d654d 345 SUPERFAMILY SSF50022 14 134 6.81E-32 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AM393_RS23740 092bc1ed69335063b7ea69d6614d654d 345 Gene3D G3DSA:2.102.10.10 23 126 5.1E-26 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AM393_RS16175 c3232d03013c1a2c655a73121ccf12ce 431 Gene3D G3DSA:3.30.565.10 274 431 4.2E-39 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS16175 c3232d03013c1a2c655a73121ccf12ce 431 Pfam PF00512 His Kinase A (phospho-acceptor) domain 203 268 5.6E-19 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM393_RS16175 c3232d03013c1a2c655a73121ccf12ce 431 SMART SM00387 313 425 1.9E-38 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS16175 c3232d03013c1a2c655a73121ccf12ce 431 Pfam PF00989 PAS fold 99 194 1.1E-8 T 28-03-2018 IPR013767 PAS fold GO:0006355 AM393_RS16175 c3232d03013c1a2c655a73121ccf12ce 431 SUPERFAMILY SSF55874 259 423 2.1E-42 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS16175 c3232d03013c1a2c655a73121ccf12ce 431 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 96 420 2.3E-137 T 28-03-2018 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 AM393_RS16175 c3232d03013c1a2c655a73121ccf12ce 431 Pfam PF11808 Domain of unknown function (DUF3329) 6 91 3.5E-27 T 28-03-2018 IPR021766 Protein of unknown function DUF3329 GO:0004673 AM393_RS16175 c3232d03013c1a2c655a73121ccf12ce 431 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 313 423 6.0E-25 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS16175 c3232d03013c1a2c655a73121ccf12ce 431 Gene3D G3DSA:1.10.287.130 209 265 2.6E-19 T 28-03-2018 AM393_RS16175 c3232d03013c1a2c655a73121ccf12ce 431 SMART SM00388 203 269 2.4E-23 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM393_RS16175 c3232d03013c1a2c655a73121ccf12ce 431 Gene3D G3DSA:3.30.450.20 97 208 5.9E-13 T 28-03-2018 AM393_RS16175 c3232d03013c1a2c655a73121ccf12ce 431 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 422 4.1E-15 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM393_RS16175 c3232d03013c1a2c655a73121ccf12ce 431 PRINTS PR00344 Bacterial sensor protein C-terminal signature 368 378 4.1E-15 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM393_RS16175 c3232d03013c1a2c655a73121ccf12ce 431 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 403 4.1E-15 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM393_RS16175 c3232d03013c1a2c655a73121ccf12ce 431 PRINTS PR00344 Bacterial sensor protein C-terminal signature 350 364 4.1E-15 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM393_RS16175 c3232d03013c1a2c655a73121ccf12ce 431 SUPERFAMILY SSF55785 87 195 8.72E-9 T 28-03-2018 IPR000014 PAS domain AM393_RS16175 c3232d03013c1a2c655a73121ccf12ce 431 SMART SM00091 98 166 1.3E-4 T 28-03-2018 IPR000014 PAS domain AM393_RS16175 c3232d03013c1a2c655a73121ccf12ce 431 SUPERFAMILY SSF47384 190 268 3.73E-20 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM393_RS17535 07551fd5df51d7fbf25bd22f3d1b4391 577 Pfam PF00884 Sulfatase 26 428 1.0E-65 T 28-03-2018 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 AM393_RS17535 07551fd5df51d7fbf25bd22f3d1b4391 577 SUPERFAMILY SSF53649 24 532 1.18E-128 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AM393_RS17535 07551fd5df51d7fbf25bd22f3d1b4391 577 Gene3D G3DSA:3.30.1120.10 457 544 6.5E-15 T 28-03-2018 AM393_RS17535 07551fd5df51d7fbf25bd22f3d1b4391 577 ProSitePatterns PS00523 Sulfatases signature 1. 70 82 - T 28-03-2018 IPR024607 Sulfatase, conserved site AM393_RS17535 07551fd5df51d7fbf25bd22f3d1b4391 577 ProSitePatterns PS00149 Sulfatases signature 2. 124 134 - T 28-03-2018 IPR024607 Sulfatase, conserved site AM393_RS17535 07551fd5df51d7fbf25bd22f3d1b4391 577 Gene3D G3DSA:3.40.720.10 22 456 3.1E-101 T 28-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AM393_RS24440 4b8cb1fdc2c42664311c60ed846da445 436 Gene3D G3DSA:2.30.40.10 16 86 1.6E-9 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM393_RS24440 4b8cb1fdc2c42664311c60ed846da445 436 Gene3D G3DSA:3.20.20.140 87 375 2.0E-67 T 28-03-2018 AM393_RS24440 4b8cb1fdc2c42664311c60ed846da445 436 Pfam PF01979 Amidohydrolase family 71 432 1.4E-68 T 28-03-2018 IPR006680 Amidohydrolase-related GO:0016787 AM393_RS24440 4b8cb1fdc2c42664311c60ed846da445 436 TIGRFAM TIGR02967 guan_deamin: guanine deaminase 30 429 8.1E-176 T 28-03-2018 IPR014311 Guanine deaminase GO:0006147|GO:0008270|GO:0008892 KEGG: 00230+3.5.4.3|MetaCyc: PWY-5497|MetaCyc: PWY-6606|MetaCyc: PWY-6608|MetaCyc: PWY-7442|Reactome: R-HSA-74259 AM393_RS24440 4b8cb1fdc2c42664311c60ed846da445 436 SUPERFAMILY SSF51556 73 376 1.68E-98 T 28-03-2018 IPR032466 Metal-dependent hydrolase AM393_RS24440 4b8cb1fdc2c42664311c60ed846da445 436 SUPERFAMILY SSF51338 31 73 2.8E-8 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM393_RS24440 4b8cb1fdc2c42664311c60ed846da445 436 SUPERFAMILY SSF51338 375 433 2.8E-8 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM393_RS00220 d189142c5eeed40648c953e373661a48 337 Pfam PF00487 Fatty acid desaturase 64 291 6.2E-29 T 28-03-2018 IPR005804 Fatty acid desaturase domain GO:0006629 AM393_RS08240 8d714cd34298b982f5ed699eaa9952ac 167 SUPERFAMILY SSF54768 9 75 5.13E-24 T 28-03-2018 AM393_RS08240 8d714cd34298b982f5ed699eaa9952ac 167 Pfam PF03719 Ribosomal protein S5, C-terminal domain 87 157 2.9E-30 T 28-03-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 AM393_RS08240 8d714cd34298b982f5ed699eaa9952ac 167 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 10 163 3.4E-71 T 28-03-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 AM393_RS08240 8d714cd34298b982f5ed699eaa9952ac 167 ProSitePatterns PS00585 Ribosomal protein S5 signature. 28 60 - T 28-03-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site AM393_RS08240 8d714cd34298b982f5ed699eaa9952ac 167 Gene3D G3DSA:3.30.230.10 76 166 5.8E-34 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AM393_RS08240 8d714cd34298b982f5ed699eaa9952ac 167 SUPERFAMILY SSF54211 79 159 7.08E-27 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM393_RS08240 8d714cd34298b982f5ed699eaa9952ac 167 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 163 34.977 T 28-03-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 AM393_RS08240 8d714cd34298b982f5ed699eaa9952ac 167 Pfam PF00333 Ribosomal protein S5, N-terminal domain 11 74 1.7E-29 T 28-03-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 AM393_RS08240 8d714cd34298b982f5ed699eaa9952ac 167 Gene3D G3DSA:3.30.160.20 10 72 4.2E-28 T 28-03-2018 AM393_RS13230 49e864aeb7dd4f537df0a2ab215cd030 311 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 8 305 2.1E-123 T 28-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AM393_RS13230 49e864aeb7dd4f537df0a2ab215cd030 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 39 61 3.6E-36 T 28-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AM393_RS13230 49e864aeb7dd4f537df0a2ab215cd030 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 79 88 3.6E-36 T 28-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AM393_RS13230 49e864aeb7dd4f537df0a2ab215cd030 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 226 235 3.6E-36 T 28-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AM393_RS13230 49e864aeb7dd4f537df0a2ab215cd030 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 134 151 3.6E-36 T 28-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AM393_RS13230 49e864aeb7dd4f537df0a2ab215cd030 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 286 300 3.6E-36 T 28-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AM393_RS13230 49e864aeb7dd4f537df0a2ab215cd030 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 264 269 3.6E-36 T 28-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AM393_RS13230 49e864aeb7dd4f537df0a2ab215cd030 311 Gene3D G3DSA:3.40.50.1370 147 292 2.2E-47 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AM393_RS13230 49e864aeb7dd4f537df0a2ab215cd030 311 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 2.1E-47 T 28-03-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 AM393_RS13230 49e864aeb7dd4f537df0a2ab215cd030 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 270 293 2.4E-25 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AM393_RS13230 49e864aeb7dd4f537df0a2ab215cd030 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 49 68 2.4E-25 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AM393_RS13230 49e864aeb7dd4f537df0a2ab215cd030 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 260 269 2.4E-25 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AM393_RS13230 49e864aeb7dd4f537df0a2ab215cd030 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 2.4E-25 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AM393_RS13230 49e864aeb7dd4f537df0a2ab215cd030 311 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 49 56 - T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AM393_RS13230 49e864aeb7dd4f537df0a2ab215cd030 311 SUPERFAMILY SSF53671 4 306 8.31E-100 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AM393_RS13230 49e864aeb7dd4f537df0a2ab215cd030 311 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 155 303 2.3E-28 T 28-03-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 AM393_RS13230 49e864aeb7dd4f537df0a2ab215cd030 311 Gene3D G3DSA:3.40.50.1370 1 146 1.4E-52 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AM393_RS13230 49e864aeb7dd4f537df0a2ab215cd030 311 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 7 307 37.93 T 28-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AM393_RS04115 30900a52dbeab018c8f12b2ee7c64364 506 SUPERFAMILY SSF52540 261 482 1.41E-71 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS04115 30900a52dbeab018c8f12b2ee7c64364 506 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 14 115 4.1E-18 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AM393_RS04115 30900a52dbeab018c8f12b2ee7c64364 506 Pfam PF00005 ABC transporter 276 429 6.7E-32 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS04115 30900a52dbeab018c8f12b2ee7c64364 506 SUPERFAMILY SSF161098 16 212 1.83E-32 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS04115 30900a52dbeab018c8f12b2ee7c64364 506 ProSitePatterns PS00211 ABC transporters family signature. 401 415 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS04115 30900a52dbeab018c8f12b2ee7c64364 506 SMART SM00382 285 477 1.4E-15 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS04115 30900a52dbeab018c8f12b2ee7c64364 506 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 35 220 7.7E-15 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS04115 30900a52dbeab018c8f12b2ee7c64364 506 Gene3D G3DSA:1.10.3720.10 1 226 3.7E-33 T 28-03-2018 AM393_RS04115 30900a52dbeab018c8f12b2ee7c64364 506 Gene3D G3DSA:3.40.50.300 257 501 1.4E-67 T 28-03-2018 AM393_RS22970 46c7eeedb4212338d57379e6d8c3eb03 250 SUPERFAMILY SSF46785 165 244 5.58E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS22970 46c7eeedb4212338d57379e6d8c3eb03 250 Gene3D G3DSA:2.60.120.10 24 165 1.6E-18 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AM393_RS22970 46c7eeedb4212338d57379e6d8c3eb03 250 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 209 224 2.2E-12 T 28-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AM393_RS22970 46c7eeedb4212338d57379e6d8c3eb03 250 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 193 209 2.2E-12 T 28-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AM393_RS22970 46c7eeedb4212338d57379e6d8c3eb03 250 SUPERFAMILY SSF51206 23 162 2.23E-31 T 28-03-2018 IPR018490 Cyclic nucleotide-binding-like AM393_RS22970 46c7eeedb4212338d57379e6d8c3eb03 250 SMART SM00419 187 235 2.8E-13 T 28-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AM393_RS22970 46c7eeedb4212338d57379e6d8c3eb03 250 Pfam PF13545 Crp-like helix-turn-helix domain 168 241 1.4E-15 T 28-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AM393_RS22970 46c7eeedb4212338d57379e6d8c3eb03 250 ProSitePatterns PS00042 Crp-type HTH domain signature. 195 218 - T 28-03-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 AM393_RS22970 46c7eeedb4212338d57379e6d8c3eb03 250 Gene3D G3DSA:1.10.10.10 166 250 6.2E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS22970 46c7eeedb4212338d57379e6d8c3eb03 250 Pfam PF00027 Cyclic nucleotide-binding domain 51 132 1.7E-15 T 28-03-2018 IPR000595 Cyclic nucleotide-binding domain AM393_RS22970 46c7eeedb4212338d57379e6d8c3eb03 250 SMART SM00100 30 151 5.2E-22 T 28-03-2018 IPR000595 Cyclic nucleotide-binding domain AM393_RS07290 777b5c3db7d6c792564d50c54a4d79f4 256 SUPERFAMILY SSF51621 4 255 9.11E-83 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AM393_RS07290 777b5c3db7d6c792564d50c54a4d79f4 256 TIGRFAM TIGR03239 GarL: 2-dehydro-3-deoxyglucarate aldolase 8 256 6.7E-144 T 28-03-2018 IPR017648 5-keto-4-deoxy-D-glucarate aldolase GO:0008672|GO:0019394 KEGG: 00053+4.1.2.20 AM393_RS07290 777b5c3db7d6c792564d50c54a4d79f4 256 Hamap MF_01291 5-keto-4-deoxy-D-glucarate aldolase [garL]. 1 256 68.104 T 28-03-2018 IPR017648 5-keto-4-deoxy-D-glucarate aldolase GO:0008672|GO:0019394 KEGG: 00053+4.1.2.20 AM393_RS07290 777b5c3db7d6c792564d50c54a4d79f4 256 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 20 245 8.1E-62 T 28-03-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 AM393_RS07290 777b5c3db7d6c792564d50c54a4d79f4 256 Gene3D G3DSA:3.20.20.60 3 255 3.6E-42 T 28-03-2018 AM393_RS08785 d0b05cf65f8cd2552ba695ba0bf5b964 345 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 3 120 3.8E-28 T 28-03-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 AM393_RS08785 d0b05cf65f8cd2552ba695ba0bf5b964 345 SUPERFAMILY SSF51735 3 195 2.19E-43 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS08785 d0b05cf65f8cd2552ba695ba0bf5b964 345 Gene3D G3DSA:3.30.360.10 135 335 1.7E-27 T 28-03-2018 AM393_RS08785 d0b05cf65f8cd2552ba695ba0bf5b964 345 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 135 238 9.5E-14 T 28-03-2018 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 AM393_RS08785 d0b05cf65f8cd2552ba695ba0bf5b964 345 Gene3D G3DSA:3.40.50.720 1 134 3.3E-31 T 28-03-2018 AM393_RS18035 17648d08e3a2f8d75bfd3df0b853dabd 283 SUPERFAMILY SSF47336 214 278 3.27E-7 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain AM393_RS18035 17648d08e3a2f8d75bfd3df0b853dabd 283 PRINTS PR01398 Isochorismatase signature 2 14 4.3E-52 T 28-03-2018 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 AM393_RS18035 17648d08e3a2f8d75bfd3df0b853dabd 283 PRINTS PR01398 Isochorismatase signature 80 99 4.3E-52 T 28-03-2018 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 AM393_RS18035 17648d08e3a2f8d75bfd3df0b853dabd 283 PRINTS PR01398 Isochorismatase signature 186 203 4.3E-52 T 28-03-2018 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 AM393_RS18035 17648d08e3a2f8d75bfd3df0b853dabd 283 PRINTS PR01398 Isochorismatase signature 112 134 4.3E-52 T 28-03-2018 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 AM393_RS18035 17648d08e3a2f8d75bfd3df0b853dabd 283 PRINTS PR01398 Isochorismatase signature 63 80 4.3E-52 T 28-03-2018 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 AM393_RS18035 17648d08e3a2f8d75bfd3df0b853dabd 283 PRINTS PR01398 Isochorismatase signature 168 186 4.3E-52 T 28-03-2018 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 AM393_RS18035 17648d08e3a2f8d75bfd3df0b853dabd 283 Gene3D G3DSA:3.40.50.850 1 208 1.8E-50 T 28-03-2018 AM393_RS18035 17648d08e3a2f8d75bfd3df0b853dabd 283 Pfam PF00857 Isochorismatase family 32 205 5.6E-39 T 28-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AM393_RS18035 17648d08e3a2f8d75bfd3df0b853dabd 283 Pfam PF00550 Phosphopantetheine attachment site 215 274 1.2E-7 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain AM393_RS18035 17648d08e3a2f8d75bfd3df0b853dabd 283 SUPERFAMILY SSF52499 1 208 3.01E-65 T 28-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AM393_RS18035 17648d08e3a2f8d75bfd3df0b853dabd 283 Gene3D G3DSA:1.10.1200.10 209 283 1.9E-8 T 28-03-2018 AM393_RS18035 17648d08e3a2f8d75bfd3df0b853dabd 283 PIRSF PIRSF001111 1 283 2.0E-132 T 28-03-2018 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 AM393_RS26790 91aec381ea96d3b87c79a272f14042d7 80 Pfam PF08980 Domain of unknown function (DUF1883) 13 79 1.7E-5 T 28-03-2018 IPR015073 Atu1913-like AM393_RS26790 91aec381ea96d3b87c79a272f14042d7 80 SUPERFAMILY SSF141099 1 80 3.4E-23 T 28-03-2018 IPR015073 Atu1913-like AM393_RS26790 91aec381ea96d3b87c79a272f14042d7 80 Gene3D G3DSA:4.10.1210.10 1 80 5.3E-20 T 28-03-2018 IPR015073 Atu1913-like AM393_RS25690 5a9c7ba8b97d6f33d70059519ded8081 326 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS25690 5a9c7ba8b97d6f33d70059519ded8081 326 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 234 317 1.5E-25 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AM393_RS25690 5a9c7ba8b97d6f33d70059519ded8081 326 Pfam PF00005 ABC transporter 26 184 1.3E-28 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS25690 5a9c7ba8b97d6f33d70059519ded8081 326 SUPERFAMILY SSF52540 5 255 7.66E-65 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS25690 5a9c7ba8b97d6f33d70059519ded8081 326 Gene3D G3DSA:3.40.50.300 2 322 1.2E-77 T 28-03-2018 AM393_RS25690 5a9c7ba8b97d6f33d70059519ded8081 326 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 236 300 3.4E-19 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AM393_RS25690 5a9c7ba8b97d6f33d70059519ded8081 326 SMART SM00382 34 234 1.2E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS14515 95bf3184690a5c1475afd37fdf26170c 342 Pfam PF00583 Acetyltransferase (GNAT) family 21 103 2.3E-4 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AM393_RS14515 95bf3184690a5c1475afd37fdf26170c 342 Pfam PF08218 Citrate lyase ligase C-terminal domain 146 331 2.6E-82 T 28-03-2018 IPR013166 Citrate lyase ligase, C-terminal GO:0008771 AM393_RS14515 95bf3184690a5c1475afd37fdf26170c 342 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 110 339 3.0E-135 T 28-03-2018 AM393_RS14515 95bf3184690a5c1475afd37fdf26170c 342 SMART SM00764 146 331 8.0E-132 T 28-03-2018 IPR013166 Citrate lyase ligase, C-terminal GO:0008771 AM393_RS14515 95bf3184690a5c1475afd37fdf26170c 342 PIRSF PIRSF005751 1 342 8.9E-138 T 28-03-2018 IPR005216 Citrate lyase ligase GO:0008771 AM393_RS14515 95bf3184690a5c1475afd37fdf26170c 342 SUPERFAMILY SSF55729 15 116 4.69E-11 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM393_RS14515 95bf3184690a5c1475afd37fdf26170c 342 Gene3D G3DSA:3.40.630.30 8 132 1.5E-9 T 28-03-2018 AM393_RS14515 95bf3184690a5c1475afd37fdf26170c 342 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 146 203 2.3E-11 T 28-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AM393_RS14515 95bf3184690a5c1475afd37fdf26170c 342 Gene3D G3DSA:3.40.50.620 133 336 3.0E-26 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM393_RS14515 95bf3184690a5c1475afd37fdf26170c 342 TIGRFAM TIGR00124 cit_ly_ligase: [citrate (pro-3S)-lyase] ligase 5 340 8.4E-174 T 28-03-2018 IPR005216 Citrate lyase ligase GO:0008771 AM393_RS14515 95bf3184690a5c1475afd37fdf26170c 342 SUPERFAMILY SSF52374 145 262 1.88E-23 T 28-03-2018 AM393_RS14515 95bf3184690a5c1475afd37fdf26170c 342 SUPERFAMILY SSF52374 298 333 1.88E-23 T 28-03-2018 AM393_RS23735 84de82b9756200c6f55d961ff41058c8 324 Pfam PF00175 Oxidoreductase NAD-binding domain 111 203 2.7E-4 T 28-03-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AM393_RS23735 84de82b9756200c6f55d961ff41058c8 324 SUPERFAMILY SSF54292 211 322 3.54E-25 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AM393_RS23735 84de82b9756200c6f55d961ff41058c8 324 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 270 278 - T 28-03-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AM393_RS23735 84de82b9756200c6f55d961ff41058c8 324 PRINTS PR00409 Phthalate dioxygenase reductase family signature 29 39 5.4E-32 T 28-03-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 AM393_RS23735 84de82b9756200c6f55d961ff41058c8 324 PRINTS PR00409 Phthalate dioxygenase reductase family signature 51 65 5.4E-32 T 28-03-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 AM393_RS23735 84de82b9756200c6f55d961ff41058c8 324 PRINTS PR00409 Phthalate dioxygenase reductase family signature 110 129 5.4E-32 T 28-03-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 AM393_RS23735 84de82b9756200c6f55d961ff41058c8 324 PRINTS PR00409 Phthalate dioxygenase reductase family signature 189 197 5.4E-32 T 28-03-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 AM393_RS23735 84de82b9756200c6f55d961ff41058c8 324 PRINTS PR00409 Phthalate dioxygenase reductase family signature 75 89 5.4E-32 T 28-03-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 AM393_RS23735 84de82b9756200c6f55d961ff41058c8 324 PRINTS PR00409 Phthalate dioxygenase reductase family signature 39 51 5.4E-32 T 28-03-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 AM393_RS23735 84de82b9756200c6f55d961ff41058c8 324 PRINTS PR00409 Phthalate dioxygenase reductase family signature 135 144 5.4E-32 T 28-03-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 AM393_RS23735 84de82b9756200c6f55d961ff41058c8 324 Gene3D G3DSA:3.10.20.30 222 323 1.6E-21 T 28-03-2018 IPR012675 Beta-grasp domain AM393_RS23735 84de82b9756200c6f55d961ff41058c8 324 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 245 310 1.3E-11 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AM393_RS23735 84de82b9756200c6f55d961ff41058c8 324 Gene3D G3DSA:3.40.50.80 101 221 1.2E-23 T 28-03-2018 AM393_RS23735 84de82b9756200c6f55d961ff41058c8 324 SUPERFAMILY SSF52343 97 226 1.31E-26 T 28-03-2018 AM393_RS23735 84de82b9756200c6f55d961ff41058c8 324 SUPERFAMILY SSF63380 2 99 1.0E-23 T 28-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AM393_RS23735 84de82b9756200c6f55d961ff41058c8 324 Gene3D G3DSA:2.40.30.10 11 100 1.0E-13 T 28-03-2018 AM393_RS05195 330bf51761b1fa58aadac84259f8943a 257 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 83 116 - T 28-03-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AM393_RS05195 330bf51761b1fa58aadac84259f8943a 257 SUPERFAMILY SSF53790 6 255 4.19E-68 T 28-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AM393_RS05195 330bf51761b1fa58aadac84259f8943a 257 TIGRFAM TIGR01465 cobM_cbiF: precorrin-4 C11-methyltransferase 10 255 1.6E-99 T 28-03-2018 IPR006362 Cobalamin (vitamin B12) biosynthesis CobM/CbiF, precorrin-4 C11-methyltransferase GO:0009236|GO:0046026 AM393_RS05195 330bf51761b1fa58aadac84259f8943a 257 Gene3D G3DSA:3.40.1010.10 8 128 2.1E-28 T 28-03-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AM393_RS05195 330bf51761b1fa58aadac84259f8943a 257 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 10 215 6.3E-45 T 28-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AM393_RS05195 330bf51761b1fa58aadac84259f8943a 257 Gene3D G3DSA:3.30.950.10 129 250 2.8E-29 T 28-03-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AM393_RS05195 330bf51761b1fa58aadac84259f8943a 257 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 13 27 - T 28-03-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AM393_RS02475 291897486a3c92b2e43ddcd3f6dc4c4e 367 PRINTS PR00183 E.coli/Salmonella-type porin signature 95 117 6.3E-73 T 28-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 AM393_RS02475 291897486a3c92b2e43ddcd3f6dc4c4e 367 PRINTS PR00183 E.coli/Salmonella-type porin signature 51 69 6.3E-73 T 28-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 AM393_RS02475 291897486a3c92b2e43ddcd3f6dc4c4e 367 PRINTS PR00183 E.coli/Salmonella-type porin signature 22 38 6.3E-73 T 28-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 AM393_RS02475 291897486a3c92b2e43ddcd3f6dc4c4e 367 PRINTS PR00183 E.coli/Salmonella-type porin signature 275 294 6.3E-73 T 28-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 AM393_RS02475 291897486a3c92b2e43ddcd3f6dc4c4e 367 PRINTS PR00183 E.coli/Salmonella-type porin signature 149 171 6.3E-73 T 28-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 AM393_RS02475 291897486a3c92b2e43ddcd3f6dc4c4e 367 PRINTS PR00183 E.coli/Salmonella-type porin signature 246 263 6.3E-73 T 28-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 AM393_RS02475 291897486a3c92b2e43ddcd3f6dc4c4e 367 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 52 63 1.0E-18 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 AM393_RS02475 291897486a3c92b2e43ddcd3f6dc4c4e 367 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 95 105 1.0E-18 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 AM393_RS02475 291897486a3c92b2e43ddcd3f6dc4c4e 367 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 319 336 1.0E-18 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 AM393_RS02475 291897486a3c92b2e43ddcd3f6dc4c4e 367 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 240 252 1.0E-18 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 AM393_RS02475 291897486a3c92b2e43ddcd3f6dc4c4e 367 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 151 162 1.0E-18 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 AM393_RS02475 291897486a3c92b2e43ddcd3f6dc4c4e 367 SUPERFAMILY SSF56935 22 367 1.23E-84 T 28-03-2018 AM393_RS02475 291897486a3c92b2e43ddcd3f6dc4c4e 367 Gene3D G3DSA:2.40.160.10 10 367 3.5E-53 T 28-03-2018 AM393_RS02475 291897486a3c92b2e43ddcd3f6dc4c4e 367 ProSitePatterns PS00576 General diffusion Gram-negative porins signature. 319 335 - T 28-03-2018 IPR013793 Porin, Gram-negative type, conserved site AM393_RS02475 291897486a3c92b2e43ddcd3f6dc4c4e 367 Pfam PF00267 Gram-negative porin 27 367 3.1E-156 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 AM393_RS24650 294116d36805b8c39d965da97af38cb2 766 PIRSF PIRSF000144 1 759 0.0 T 28-03-2018 AM393_RS24650 294116d36805b8c39d965da97af38cb2 766 Gene3D G3DSA:3.40.50.740 115 332 2.5E-35 T 28-03-2018 AM393_RS24650 294116d36805b8c39d965da97af38cb2 766 SUPERFAMILY SSF50692 637 753 8.14E-20 T 28-03-2018 IPR009010 Aspartate decarboxylase-like domain AM393_RS24650 294116d36805b8c39d965da97af38cb2 766 TIGRFAM TIGR01701 Fdhalpha-like: oxidoreductase alpha (molybdopterin) subunit 18 753 4.0E-291 T 28-03-2018 IPR010046 Oxidoreductase alpha (molybdopterin) subunit GO:0008863|GO:0030151|GO:0051539 AM393_RS24650 294116d36805b8c39d965da97af38cb2 766 Pfam PF01568 Molydopterin dinucleotide binding domain 642 749 4.3E-16 T 28-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 AM393_RS24650 294116d36805b8c39d965da97af38cb2 766 SUPERFAMILY SSF53706 52 625 3.93E-145 T 28-03-2018 AM393_RS24650 294116d36805b8c39d965da97af38cb2 766 Pfam PF00384 Molybdopterin oxidoreductase 114 437 8.4E-22 T 28-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM393_RS24650 294116d36805b8c39d965da97af38cb2 766 Gene3D G3DSA:2.40.40.20 605 754 1.3E-25 T 28-03-2018 AM393_RS24650 294116d36805b8c39d965da97af38cb2 766 Gene3D G3DSA:3.40.50.740 333 604 2.1E-46 T 28-03-2018 AM393_RS04195 41f5a49e3e94a651d422308876fa2425 595 SMART SM00382 314 467 5.1E-8 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS04195 41f5a49e3e94a651d422308876fa2425 595 Pfam PF02954 Bacterial regulatory protein, Fis family 556 586 1.2E-9 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM393_RS04195 41f5a49e3e94a651d422308876fa2425 595 Gene3D G3DSA:3.30.450.40 121 195 0.0039 T 28-03-2018 IPR029016 GAF domain-like AM393_RS04195 41f5a49e3e94a651d422308876fa2425 595 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 556 573 3.5E-7 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM393_RS04195 41f5a49e3e94a651d422308876fa2425 595 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 573 593 3.5E-7 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM393_RS04195 41f5a49e3e94a651d422308876fa2425 595 Gene3D G3DSA:3.40.50.300 299 464 6.4E-21 T 28-03-2018 AM393_RS04195 41f5a49e3e94a651d422308876fa2425 595 SUPERFAMILY SSF46689 548 590 1.16E-8 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS04195 41f5a49e3e94a651d422308876fa2425 595 Gene3D G3DSA:1.10.10.60 535 575 5.9E-11 T 28-03-2018 AM393_RS04195 41f5a49e3e94a651d422308876fa2425 595 SUPERFAMILY SSF55781 45 190 1.37E-7 T 28-03-2018 IPR029016 GAF domain-like AM393_RS04195 41f5a49e3e94a651d422308876fa2425 595 SUPERFAMILY SSF52540 308 537 2.28E-52 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS04195 41f5a49e3e94a651d422308876fa2425 595 Pfam PF00158 Sigma-54 interaction domain 310 460 9.7E-57 T 28-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AM393_RS04195 41f5a49e3e94a651d422308876fa2425 595 Gene3D G3DSA:1.10.8.60 465 534 1.1E-10 T 28-03-2018 AM393_RS04195 41f5a49e3e94a651d422308876fa2425 595 Pfam PF01590 GAF domain 55 188 2.9E-5 T 28-03-2018 IPR003018 GAF domain GO:0005515 AM393_RS04195 41f5a49e3e94a651d422308876fa2425 595 Gene3D G3DSA:1.10.10.10 576 595 0.0011 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS04195 41f5a49e3e94a651d422308876fa2425 595 Gene3D G3DSA:3.30.450.40 44 120 0.11 T 28-03-2018 IPR029016 GAF domain-like AM393_RS26215 405d48bfd2577e83886abf5474a2c936 270 Pfam PF01614 Bacterial transcriptional regulator 135 258 2.9E-13 T 28-03-2018 IPR014757 Transcription regulator IclR, C-terminal AM393_RS26215 405d48bfd2577e83886abf5474a2c936 270 Pfam PF09339 IclR helix-turn-helix domain 15 64 1.8E-11 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AM393_RS26215 405d48bfd2577e83886abf5474a2c936 270 SUPERFAMILY SSF55781 84 260 5.1E-29 T 28-03-2018 IPR029016 GAF domain-like AM393_RS26215 405d48bfd2577e83886abf5474a2c936 270 SMART SM00346 12 102 4.5E-24 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AM393_RS26215 405d48bfd2577e83886abf5474a2c936 270 SUPERFAMILY SSF46785 13 81 2.38E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS26215 405d48bfd2577e83886abf5474a2c936 270 Gene3D G3DSA:3.30.450.40 84 266 1.2E-32 T 28-03-2018 IPR029016 GAF domain-like AM393_RS26215 405d48bfd2577e83886abf5474a2c936 270 Gene3D G3DSA:1.10.10.10 3 83 9.7E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS25675 5b954fc99e3b062483b59604eef9506c 567 Gene3D G3DSA:3.90.76.10 79 195 1.2E-30 T 28-03-2018 AM393_RS25675 5b954fc99e3b062483b59604eef9506c 567 SUPERFAMILY SSF53850 60 555 1.66E-117 T 28-03-2018 AM393_RS25675 5b954fc99e3b062483b59604eef9506c 567 Gene3D G3DSA:3.40.190.10 196 333 1.0E-24 T 28-03-2018 AM393_RS25675 5b954fc99e3b062483b59604eef9506c 567 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 104 486 5.1E-81 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain AM393_RS25675 5b954fc99e3b062483b59604eef9506c 567 PIRSF PIRSF002741 20 559 9.5E-100 T 28-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AM393_RS25675 5b954fc99e3b062483b59604eef9506c 567 Gene3D G3DSA:3.10.105.10 334 534 1.1E-52 T 28-03-2018 AM393_RS15905 ebd79b47f5e3de2a34e5666152bcbc67 290 Gene3D G3DSA:1.10.3720.10 14 280 1.1E-22 T 28-03-2018 AM393_RS15905 ebd79b47f5e3de2a34e5666152bcbc67 290 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 277 3.4E-13 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS15905 ebd79b47f5e3de2a34e5666152bcbc67 290 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 19 285 1.1E-87 T 28-03-2018 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 AM393_RS15905 ebd79b47f5e3de2a34e5666152bcbc67 290 SUPERFAMILY SSF161098 91 278 4.45E-31 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS26220 98183fb951614526c35c64c2a1b16958 352 Gene3D G3DSA:3.40.50.1980 24 182 1.2E-24 T 28-03-2018 AM393_RS26220 98183fb951614526c35c64c2a1b16958 352 SUPERFAMILY SSF53807 26 325 1.73E-55 T 28-03-2018 AM393_RS26220 98183fb951614526c35c64c2a1b16958 352 Gene3D G3DSA:3.40.50.1980 190 350 1.8E-41 T 28-03-2018 AM393_RS26220 98183fb951614526c35c64c2a1b16958 352 Pfam PF01497 Periplasmic binding protein 45 298 3.8E-29 T 28-03-2018 IPR002491 ABC transporter periplasmic binding domain GO:0005488 AM393_RS11725 d10c1903f33e10220b2ea085e98b4315 446 PIRSF PIRSF004539 1 444 8.9E-196 T 28-03-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 AM393_RS11725 d10c1903f33e10220b2ea085e98b4315 446 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 6 376 1.5E-148 T 28-03-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 AM393_RS11725 d10c1903f33e10220b2ea085e98b4315 446 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 6 443 1.5E-198 T 28-03-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 AM393_RS18665 96a34a1566ac4e3041b910de3cbf2f30 588 SUPERFAMILY SSF56425 236 356 4.64E-42 T 28-03-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM393_RS18665 96a34a1566ac4e3041b910de3cbf2f30 588 SUPERFAMILY SSF51905 4 259 2.0E-75 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS18665 96a34a1566ac4e3041b910de3cbf2f30 588 SUPERFAMILY SSF51905 359 439 2.0E-75 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS18665 96a34a1566ac4e3041b910de3cbf2f30 588 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 6 588 3.6E-278 T 28-03-2018 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM393_RS18665 96a34a1566ac4e3041b910de3cbf2f30 588 PIRSF PIRSF000171 1 579 1.2E-46 T 28-03-2018 AM393_RS18665 96a34a1566ac4e3041b910de3cbf2f30 588 Gene3D G3DSA:1.20.58.100 431 540 4.7E-36 T 28-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM393_RS18665 96a34a1566ac4e3041b910de3cbf2f30 588 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 10 29 7.0E-5 T 28-03-2018 AM393_RS18665 96a34a1566ac4e3041b910de3cbf2f30 588 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 368 390 7.0E-5 T 28-03-2018 AM393_RS18665 96a34a1566ac4e3041b910de3cbf2f30 588 Pfam PF02910 Fumarate reductase flavoprotein C-term 460 588 1.7E-35 T 28-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM393_RS18665 96a34a1566ac4e3041b910de3cbf2f30 588 Pfam PF00890 FAD binding domain 9 405 7.1E-119 T 28-03-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM393_RS18665 96a34a1566ac4e3041b910de3cbf2f30 588 Gene3D G3DSA:3.50.50.60 302 430 9.2E-18 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS18665 96a34a1566ac4e3041b910de3cbf2f30 588 Gene3D G3DSA:3.50.50.60 3 294 1.5E-48 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS18665 96a34a1566ac4e3041b910de3cbf2f30 588 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 9 588 7.3E-242 T 28-03-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM393_RS18665 96a34a1566ac4e3041b910de3cbf2f30 588 SUPERFAMILY SSF46977 452 588 2.88E-46 T 28-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM393_RS18665 96a34a1566ac4e3041b910de3cbf2f30 588 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 28-03-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM393_RS18665 96a34a1566ac4e3041b910de3cbf2f30 588 Gene3D G3DSA:4.10.80.40 541 588 5.2E-12 T 28-03-2018 AM393_RS08745 5c3fbe093f1477208548d5e6d5a9e82a 658 Hamap MF_01248 Glycogen debranching enzyme [glgX]. 1 657 70.745 T 28-03-2018 IPR022844 Glycogen debranching enzyme, bacterial GO:0004553|GO:0005977 AM393_RS08745 5c3fbe093f1477208548d5e6d5a9e82a 658 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 7 634 2.4E-270 T 28-03-2018 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 AM393_RS08745 5c3fbe093f1477208548d5e6d5a9e82a 658 SMART SM00642 130 558 2.3E-7 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AM393_RS08745 5c3fbe093f1477208548d5e6d5a9e82a 658 Gene3D G3DSA:2.60.40.10 1 133 1.9E-42 T 28-03-2018 IPR013783 Immunoglobulin-like fold AM393_RS08745 5c3fbe093f1477208548d5e6d5a9e82a 658 Gene3D G3DSA:2.60.40.1180 573 657 8.0E-9 T 28-03-2018 AM393_RS08745 5c3fbe093f1477208548d5e6d5a9e82a 658 Pfam PF00128 Alpha amylase, catalytic domain 185 358 1.2E-8 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AM393_RS08745 5c3fbe093f1477208548d5e6d5a9e82a 658 SUPERFAMILY SSF81296 7 144 5.6E-42 T 28-03-2018 IPR014756 Immunoglobulin E-set AM393_RS08745 5c3fbe093f1477208548d5e6d5a9e82a 658 SUPERFAMILY SSF51445 135 463 2.83E-127 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily AM393_RS08745 5c3fbe093f1477208548d5e6d5a9e82a 658 SUPERFAMILY SSF51445 492 565 2.83E-127 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily AM393_RS08745 5c3fbe093f1477208548d5e6d5a9e82a 658 Gene3D G3DSA:3.20.20.80 134 572 9.9E-112 T 28-03-2018 AM393_RS08745 5c3fbe093f1477208548d5e6d5a9e82a 658 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 11 96 1.0E-17 T 28-03-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077 AM393_RS02240 ada02b9b3fc7133a2310dd914d73252f 376 Pfam PF00381 PTS HPr component phosphorylation site 287 368 1.6E-25 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like AM393_RS02240 ada02b9b3fc7133a2310dd914d73252f 376 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 297 304 - T 28-03-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site AM393_RS02240 ada02b9b3fc7133a2310dd914d73252f 376 SUPERFAMILY SSF55804 150 276 1.96E-13 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 AM393_RS02240 ada02b9b3fc7133a2310dd914d73252f 376 SUPERFAMILY SSF55594 287 375 1.44E-24 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like AM393_RS02240 ada02b9b3fc7133a2310dd914d73252f 376 Gene3D G3DSA:3.30.1340.10 282 369 1.3E-26 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like AM393_RS02240 ada02b9b3fc7133a2310dd914d73252f 376 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 286 368 4.5E-22 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like AM393_RS02240 ada02b9b3fc7133a2310dd914d73252f 376 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 326 341 - T 28-03-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site AM393_RS02240 ada02b9b3fc7133a2310dd914d73252f 376 Gene3D G3DSA:3.40.930.10 145 279 2.1E-5 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 AM393_RS02240 ada02b9b3fc7133a2310dd914d73252f 376 Gene3D G3DSA:3.40.930.10 3 143 1.4E-33 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 AM393_RS02240 ada02b9b3fc7133a2310dd914d73252f 376 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 139 1.6E-28 T 28-03-2018 IPR002178 PTS EIIA type-2 domain AM393_RS02240 ada02b9b3fc7133a2310dd914d73252f 376 SUPERFAMILY SSF55804 2 140 1.31E-38 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 AM393_RS02240 ada02b9b3fc7133a2310dd914d73252f 376 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 47 63 - T 28-03-2018 IPR002178 PTS EIIA type-2 domain AM393_RS02240 ada02b9b3fc7133a2310dd914d73252f 376 PRINTS PR00107 Phosphocarrier protein signature 325 340 2.1E-18 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like AM393_RS02240 ada02b9b3fc7133a2310dd914d73252f 376 PRINTS PR00107 Phosphocarrier protein signature 297 313 2.1E-18 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like AM393_RS02240 ada02b9b3fc7133a2310dd914d73252f 376 PRINTS PR00107 Phosphocarrier protein signature 340 357 2.1E-18 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like AM393_RS27280 3f3a7dbfdb9ed4f1fb6e776face7e173 423 SUPERFAMILY SSF56672 1 238 3.56E-63 T 28-03-2018 AM393_RS27280 3f3a7dbfdb9ed4f1fb6e776face7e173 423 Gene3D G3DSA:3.30.70.270 37 114 2.2E-15 T 28-03-2018 AM393_RS27280 3f3a7dbfdb9ed4f1fb6e776face7e173 423 Gene3D G3DSA:3.30.70.270 115 173 1.9E-6 T 28-03-2018 AM393_RS27280 3f3a7dbfdb9ed4f1fb6e776face7e173 423 SUPERFAMILY SSF100879 246 341 3.4E-6 T 28-03-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AM393_RS27280 3f3a7dbfdb9ed4f1fb6e776face7e173 423 Gene3D G3DSA:3.30.1490.100 251 364 1.7E-26 T 28-03-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AM393_RS27280 3f3a7dbfdb9ed4f1fb6e776face7e173 423 Pfam PF00817 impB/mucB/samB family 6 149 3.9E-34 T 28-03-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AM393_RS27280 3f3a7dbfdb9ed4f1fb6e776face7e173 423 Pfam PF13438 Domain of unknown function (DUF4113) 373 421 2.9E-21 T 28-03-2018 IPR025188 Domain of unknown function DUF4113 AM393_RS27280 3f3a7dbfdb9ed4f1fb6e776face7e173 423 Pfam PF11799 impB/mucB/samB family C-terminal domain 240 354 5.3E-18 T 28-03-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AM393_RS27280 3f3a7dbfdb9ed4f1fb6e776face7e173 423 Gene3D G3DSA:1.10.150.20 174 250 4.3E-14 T 28-03-2018 AM393_RS00920 7fd62c6a6a3f847bbe1f85dc6cd0f7ab 495 SUPERFAMILY SSF51445 6 374 1.16E-89 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily AM393_RS00920 7fd62c6a6a3f847bbe1f85dc6cd0f7ab 495 Pfam PF00128 Alpha amylase, catalytic domain 31 367 2.6E-23 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AM393_RS00920 7fd62c6a6a3f847bbe1f85dc6cd0f7ab 495 Gene3D G3DSA:3.20.20.80 4 385 2.5E-70 T 28-03-2018 AM393_RS00920 7fd62c6a6a3f847bbe1f85dc6cd0f7ab 495 Gene3D G3DSA:2.60.40.1180 407 495 2.0E-30 T 28-03-2018 AM393_RS00920 7fd62c6a6a3f847bbe1f85dc6cd0f7ab 495 PIRSF PIRSF001021 1 494 5.1E-207 T 28-03-2018 IPR013776 Alpha-amylase, thermostable GO:0004553|GO:0005509|GO:0005975 KEGG: 00500+3.2.1.1 AM393_RS00920 7fd62c6a6a3f847bbe1f85dc6cd0f7ab 495 SUPERFAMILY SSF51011 405 491 7.71E-28 T 28-03-2018 AM393_RS00920 7fd62c6a6a3f847bbe1f85dc6cd0f7ab 495 SMART SM00642 4 402 1.2E-54 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AM393_RS00920 7fd62c6a6a3f847bbe1f85dc6cd0f7ab 495 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 415 491 6.0E-6 T 28-03-2018 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622 AM393_RS26410 b9fa1dfa8f864b015b0ee307e501be12 1018 Pfam PF13183 4Fe-4S dicluster domain 576 687 1.5E-12 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM393_RS26410 b9fa1dfa8f864b015b0ee307e501be12 1018 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 673 684 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM393_RS26410 b9fa1dfa8f864b015b0ee307e501be12 1018 SUPERFAMILY SSF46548 655 691 1.44E-7 T 28-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AM393_RS26410 b9fa1dfa8f864b015b0ee307e501be12 1018 SUPERFAMILY SSF46548 516 622 1.44E-7 T 28-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AM393_RS26410 b9fa1dfa8f864b015b0ee307e501be12 1018 Pfam PF01565 FAD binding domain 52 192 2.0E-37 T 28-03-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 AM393_RS26410 b9fa1dfa8f864b015b0ee307e501be12 1018 Gene3D G3DSA:1.10.45.10 473 539 3.2E-9 T 28-03-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 AM393_RS26410 b9fa1dfa8f864b015b0ee307e501be12 1018 Gene3D G3DSA:1.10.1060.10 542 703 7.8E-12 T 28-03-2018 AM393_RS26410 b9fa1dfa8f864b015b0ee307e501be12 1018 Gene3D G3DSA:3.30.465.10 105 304 5.4E-44 T 28-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AM393_RS26410 b9fa1dfa8f864b015b0ee307e501be12 1018 SUPERFAMILY SSF55103 257 542 1.05E-53 T 28-03-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 AM393_RS26410 b9fa1dfa8f864b015b0ee307e501be12 1018 Pfam PF02913 FAD linked oxidases, C-terminal domain 281 539 3.5E-65 T 28-03-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 AM393_RS26410 b9fa1dfa8f864b015b0ee307e501be12 1018 Gene3D G3DSA:3.30.43.10 4 104 4.8E-17 T 28-03-2018 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 AM393_RS26410 b9fa1dfa8f864b015b0ee307e501be12 1018 SUPERFAMILY SSF56176 250 282 9.81E-54 T 28-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AM393_RS26410 b9fa1dfa8f864b015b0ee307e501be12 1018 SUPERFAMILY SSF56176 21 192 9.81E-54 T 28-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AM393_RS13130 c739071da8ca805aea5bf4da91fb2de2 377 TIGRFAM TIGR03583 EF_0837: putative amidohydrolase, EF_0837/AHA_3915 family 3 364 2.3E-172 T 28-03-2018 IPR020043 Amidohydrolase EF0837/AHA3915, putative AM393_RS13130 c739071da8ca805aea5bf4da91fb2de2 377 Gene3D G3DSA:3.20.20.140 66 315 7.7E-44 T 28-03-2018 AM393_RS13130 c739071da8ca805aea5bf4da91fb2de2 377 SUPERFAMILY SSF51556 51 316 4.54E-70 T 28-03-2018 IPR032466 Metal-dependent hydrolase AM393_RS13130 c739071da8ca805aea5bf4da91fb2de2 377 Pfam PF01979 Amidohydrolase family 47 334 4.4E-8 T 28-03-2018 IPR006680 Amidohydrolase-related GO:0016787 AM393_RS13130 c739071da8ca805aea5bf4da91fb2de2 377 SUPERFAMILY SSF51338 1 59 6.82E-13 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM393_RS13130 c739071da8ca805aea5bf4da91fb2de2 377 PIRSF PIRSF039004 1 375 2.7E-131 T 28-03-2018 IPR020043 Amidohydrolase EF0837/AHA3915, putative AM393_RS13130 c739071da8ca805aea5bf4da91fb2de2 377 Gene3D G3DSA:2.30.40.10 1 65 1.2E-9 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM393_RS10865 929e2179555789fc25f53e10229c458e 104 SUPERFAMILY SSF54909 1 103 1.66E-37 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel AM393_RS10865 929e2179555789fc25f53e10229c458e 104 TIGRFAM TIGR02625 YiiL_rotase: L-rhamnose mutarotase 3 103 7.9E-56 T 28-03-2018 IPR013448 L-rhamnose mutarotase GO:0005737|GO:0016857|GO:0019299 AM393_RS10865 929e2179555789fc25f53e10229c458e 104 Hamap MF_01663 L-rhamnose mutarotase [rhaM]. 1 104 32.123 T 28-03-2018 IPR013448 L-rhamnose mutarotase GO:0005737|GO:0016857|GO:0019299 AM393_RS10865 929e2179555789fc25f53e10229c458e 104 Gene3D G3DSA:3.30.70.100 1 95 3.0E-5 T 28-03-2018 AM393_RS10865 929e2179555789fc25f53e10229c458e 104 Pfam PF05336 L-rhamnose mutarotase 3 103 8.0E-29 T 28-03-2018 IPR008000 Rhamnose/fucose mutarotase GO:0005737|GO:0016857 AM393_RS25030 d99f85fdd409b46921b03b9c5814f1a9 308 SUPERFAMILY SSF161098 52 265 4.19E-39 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS25030 d99f85fdd409b46921b03b9c5814f1a9 308 Gene3D G3DSA:1.10.3720.10 14 279 3.3E-42 T 28-03-2018 AM393_RS25030 d99f85fdd409b46921b03b9c5814f1a9 308 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 53 168 3.4E-15 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AM393_RS25030 d99f85fdd409b46921b03b9c5814f1a9 308 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 74 273 2.3E-16 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS16610 2e9d3fdb9b234a55d8a008f2b723916e 519 SMART SM00052 267 507 4.3E-106 T 28-03-2018 IPR001633 EAL domain AM393_RS16610 2e9d3fdb9b234a55d8a008f2b723916e 519 Gene3D G3DSA:3.20.20.450 270 519 3.8E-84 T 28-03-2018 IPR001633 EAL domain AM393_RS16610 2e9d3fdb9b234a55d8a008f2b723916e 519 Pfam PF12792 CSS motif domain associated with EAL 38 243 3.1E-40 T 28-03-2018 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain AM393_RS16610 2e9d3fdb9b234a55d8a008f2b723916e 519 Pfam PF00563 EAL domain 274 501 2.5E-64 T 28-03-2018 IPR001633 EAL domain AM393_RS16610 2e9d3fdb9b234a55d8a008f2b723916e 519 SUPERFAMILY SSF141868 273 514 2.48E-78 T 28-03-2018 IPR001633 EAL domain AM393_RS08230 2f57517eb48de5b2988b9c688139f7e6 144 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 143 1.5E-32 T 28-03-2018 IPR021131 Ribosomal protein L18e/L15P AM393_RS08230 2f57517eb48de5b2988b9c688139f7e6 144 Gene3D G3DSA:3.100.10.10 42 144 1.4E-25 T 28-03-2018 AM393_RS08230 2f57517eb48de5b2988b9c688139f7e6 144 SUPERFAMILY SSF52080 4 143 3.14E-47 T 28-03-2018 IPR021131 Ribosomal protein L18e/L15P AM393_RS08230 2f57517eb48de5b2988b9c688139f7e6 144 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 144 19.553 T 28-03-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 AM393_RS08230 2f57517eb48de5b2988b9c688139f7e6 144 ProSitePatterns PS00475 Ribosomal protein L15 signature. 109 139 - T 28-03-2018 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM393_RS08230 2f57517eb48de5b2988b9c688139f7e6 144 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 143 1.7E-51 T 28-03-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS05335 7005dde32dd2c3274b2e0625285e84d3 404 Gene3D G3DSA:3.30.420.40 4 195 2.6E-72 T 28-03-2018 AM393_RS05335 7005dde32dd2c3274b2e0625285e84d3 404 TIGRFAM TIGR00016 ackA: acetate kinase 3 393 7.7E-154 T 28-03-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AM393_RS05335 7005dde32dd2c3274b2e0625285e84d3 404 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 5 16 - T 28-03-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AM393_RS05335 7005dde32dd2c3274b2e0625285e84d3 404 PIRSF PIRSF000722 1 396 7.1E-147 T 28-03-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AM393_RS05335 7005dde32dd2c3274b2e0625285e84d3 404 PRINTS PR00471 Acetate kinase family signature 203 224 2.2E-41 T 28-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AM393_RS05335 7005dde32dd2c3274b2e0625285e84d3 404 PRINTS PR00471 Acetate kinase family signature 322 338 2.2E-41 T 28-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AM393_RS05335 7005dde32dd2c3274b2e0625285e84d3 404 PRINTS PR00471 Acetate kinase family signature 5 16 2.2E-41 T 28-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AM393_RS05335 7005dde32dd2c3274b2e0625285e84d3 404 PRINTS PR00471 Acetate kinase family signature 374 386 2.2E-41 T 28-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AM393_RS05335 7005dde32dd2c3274b2e0625285e84d3 404 PRINTS PR00471 Acetate kinase family signature 173 186 2.2E-41 T 28-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AM393_RS05335 7005dde32dd2c3274b2e0625285e84d3 404 PRINTS PR00471 Acetate kinase family signature 300 313 2.2E-41 T 28-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AM393_RS05335 7005dde32dd2c3274b2e0625285e84d3 404 SUPERFAMILY SSF53067 4 195 1.1E-64 T 28-03-2018 AM393_RS05335 7005dde32dd2c3274b2e0625285e84d3 404 Hamap MF_00020 Acetate kinase [ackA]. 1 398 181.336 T 28-03-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AM393_RS05335 7005dde32dd2c3274b2e0625285e84d3 404 SUPERFAMILY SSF53067 157 392 8.57E-87 T 28-03-2018 AM393_RS05335 7005dde32dd2c3274b2e0625285e84d3 404 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 203 220 - T 28-03-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AM393_RS05335 7005dde32dd2c3274b2e0625285e84d3 404 Gene3D G3DSA:3.30.420.40 197 401 2.3E-79 T 28-03-2018 AM393_RS05335 7005dde32dd2c3274b2e0625285e84d3 404 Hamap MF_01882 Probable propionate kinase [pduW]. 1 392 77.671 T 28-03-2018 IPR024896 Propionate kinase PduW GO:0008980|GO:0019543|GO:0051144 KEGG: 00640+2.7.2.15|MetaCyc: PWY-5437|MetaCyc: PWY-7013 AM393_RS05335 7005dde32dd2c3274b2e0625285e84d3 404 Pfam PF00871 Acetokinase family 4 387 6.7E-148 T 28-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AM393_RS14525 14666c159a6cf585b53b1349ad4acad9 289 Gene3D G3DSA:3.20.20.360 1 262 1.3E-51 T 28-03-2018 AM393_RS14525 14666c159a6cf585b53b1349ad4acad9 289 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 5 223 2.2E-77 T 28-03-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 AM393_RS14525 14666c159a6cf585b53b1349ad4acad9 289 TIGRFAM TIGR01588 citE: citrate (pro-3S)-lyase, beta subunit 2 287 3.3E-157 T 28-03-2018 IPR006475 Citrate lyase, beta subunit, bacteria GO:0005737|GO:0006084|GO:0008816|GO:0009346 KEGG: 00720+4.1.3.34|MetaCyc: PWY-5392|MetaCyc: PWY-6038 AM393_RS14525 14666c159a6cf585b53b1349ad4acad9 289 PIRSF PIRSF015582 1 289 5.1E-76 T 28-03-2018 IPR011206 Citrate lyase beta subunit-like AM393_RS14525 14666c159a6cf585b53b1349ad4acad9 289 SUPERFAMILY SSF51621 2 233 2.79E-62 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AM393_RS25570 8a89085ff56fc097e5aedf59f4afbd80 382 Gene3D G3DSA:3.40.50.150 105 372 5.5E-66 T 28-03-2018 AM393_RS25570 8a89085ff56fc097e5aedf59f4afbd80 382 SUPERFAMILY SSF53335 117 373 3.41E-81 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM393_RS25570 8a89085ff56fc097e5aedf59f4afbd80 382 Pfam PF02353 Mycolic acid cyclopropane synthetase 108 368 9.5E-102 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM393_RS25570 8a89085ff56fc097e5aedf59f4afbd80 382 PIRSF PIRSF003085 2 381 2.3E-127 T 28-03-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 AM393_RS02020 62319fd35e2dc6c25a6115045c8c5cfd 677 Gene3D G3DSA:3.40.50.620 250 372 3.0E-22 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM393_RS02020 62319fd35e2dc6c25a6115045c8c5cfd 677 Gene3D G3DSA:2.40.50.140 567 677 1.8E-24 T 28-03-2018 AM393_RS02020 62319fd35e2dc6c25a6115045c8c5cfd 677 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 8 536 8.7E-207 T 28-03-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AM393_RS02020 62319fd35e2dc6c25a6115045c8c5cfd 677 SUPERFAMILY SSF57770 142 176 8.24E-13 T 28-03-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AM393_RS02020 62319fd35e2dc6c25a6115045c8c5cfd 677 SUPERFAMILY SSF50249 570 676 1.59E-28 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM393_RS02020 62319fd35e2dc6c25a6115045c8c5cfd 677 Pfam PF09334 tRNA synthetases class I (M) 8 397 1.1E-165 T 28-03-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM393_RS02020 62319fd35e2dc6c25a6115045c8c5cfd 677 Gene3D G3DSA:3.40.50.620 4 79 3.2E-23 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM393_RS02020 62319fd35e2dc6c25a6115045c8c5cfd 677 SUPERFAMILY SSF47323 391 548 1.33E-45 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM393_RS02020 62319fd35e2dc6c25a6115045c8c5cfd 677 Hamap MF_00098 Methionine--tRNA ligase [metG]. 6 546 41.823 T 28-03-2018 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AM393_RS02020 62319fd35e2dc6c25a6115045c8c5cfd 677 SUPERFAMILY SSF52374 176 388 1.38E-106 T 28-03-2018 AM393_RS02020 62319fd35e2dc6c25a6115045c8c5cfd 677 SUPERFAMILY SSF52374 6 141 1.38E-106 T 28-03-2018 AM393_RS02020 62319fd35e2dc6c25a6115045c8c5cfd 677 Gene3D G3DSA:2.20.28.20 142 175 9.5E-16 T 28-03-2018 AM393_RS02020 62319fd35e2dc6c25a6115045c8c5cfd 677 Gene3D G3DSA:1.10.730.10 374 537 1.5E-35 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM393_RS02020 62319fd35e2dc6c25a6115045c8c5cfd 677 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 543 677 1.2E-46 T 28-03-2018 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AM393_RS02020 62319fd35e2dc6c25a6115045c8c5cfd 677 Gene3D G3DSA:2.170.220.10 181 249 1.4E-15 T 28-03-2018 AM393_RS02020 62319fd35e2dc6c25a6115045c8c5cfd 677 PRINTS PR01041 Methionyl-tRNA synthetase signature 292 307 7.1E-26 T 28-03-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AM393_RS02020 62319fd35e2dc6c25a6115045c8c5cfd 677 PRINTS PR01041 Methionyl-tRNA synthetase signature 42 56 7.1E-26 T 28-03-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AM393_RS02020 62319fd35e2dc6c25a6115045c8c5cfd 677 PRINTS PR01041 Methionyl-tRNA synthetase signature 90 101 7.1E-26 T 28-03-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AM393_RS02020 62319fd35e2dc6c25a6115045c8c5cfd 677 PRINTS PR01041 Methionyl-tRNA synthetase signature 10 23 7.1E-26 T 28-03-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AM393_RS02020 62319fd35e2dc6c25a6115045c8c5cfd 677 PRINTS PR01041 Methionyl-tRNA synthetase signature 251 262 7.1E-26 T 28-03-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AM393_RS02020 62319fd35e2dc6c25a6115045c8c5cfd 677 PRINTS PR01041 Methionyl-tRNA synthetase signature 385 396 7.1E-26 T 28-03-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AM393_RS02020 62319fd35e2dc6c25a6115045c8c5cfd 677 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 15 26 - T 28-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM393_RS02020 62319fd35e2dc6c25a6115045c8c5cfd 677 Pfam PF01588 Putative tRNA binding domain 581 674 2.7E-21 T 28-03-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 AM393_RS11970 a26c3ae726f3fef17aa859c1ea85b63c 549 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 265 278 - T 28-03-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM393_RS11970 a26c3ae726f3fef17aa859c1ea85b63c 549 Gene3D G3DSA:3.40.50.10490 259 512 2.9E-125 T 28-03-2018 AM393_RS11970 a26c3ae726f3fef17aa859c1ea85b63c 549 Gene3D G3DSA:3.40.50.10490 137 258 1.5E-53 T 28-03-2018 AM393_RS11970 a26c3ae726f3fef17aa859c1ea85b63c 549 Gene3D G3DSA:3.40.50.10490 7 135 1.3E-44 T 28-03-2018 AM393_RS11970 a26c3ae726f3fef17aa859c1ea85b63c 549 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 46 524 42.917 T 28-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM393_RS11970 a26c3ae726f3fef17aa859c1ea85b63c 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 338 359 2.3E-55 T 28-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM393_RS11970 a26c3ae726f3fef17aa859c1ea85b63c 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 497 510 2.3E-55 T 28-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM393_RS11970 a26c3ae726f3fef17aa859c1ea85b63c 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 483 497 2.3E-55 T 28-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM393_RS11970 a26c3ae726f3fef17aa859c1ea85b63c 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 261 279 2.3E-55 T 28-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM393_RS11970 a26c3ae726f3fef17aa859c1ea85b63c 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 150 169 2.3E-55 T 28-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM393_RS11970 a26c3ae726f3fef17aa859c1ea85b63c 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 465 483 2.3E-55 T 28-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM393_RS11970 a26c3ae726f3fef17aa859c1ea85b63c 549 Gene3D G3DSA:1.10.1390.10 513 549 8.4E-22 T 28-03-2018 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM393_RS11970 a26c3ae726f3fef17aa859c1ea85b63c 549 Pfam PF00342 Phosphoglucose isomerase 52 541 6.0E-256 T 28-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM393_RS11970 a26c3ae726f3fef17aa859c1ea85b63c 549 SUPERFAMILY SSF53697 5 548 3.61E-226 T 28-03-2018 AM393_RS11970 a26c3ae726f3fef17aa859c1ea85b63c 549 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 497 514 - T 28-03-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM393_RS00680 ade9bcc5a83edbe9308e1b6770ef72be 261 Gene3D G3DSA:1.10.3470.10 1 261 3.5E-26 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AM393_RS00680 ade9bcc5a83edbe9308e1b6770ef72be 261 SUPERFAMILY SSF81345 3 257 1.7E-41 T 28-03-2018 IPR029022 ABC transporter, BtuC-like AM393_RS00680 ade9bcc5a83edbe9308e1b6770ef72be 261 Pfam PF00950 ABC 3 transport family 1 257 2.3E-87 T 28-03-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 AM393_RS26860 06b7272978e988970262370df52df21d 559 Gene3D G3DSA:3.30.750.24 442 559 5.8E-15 T 28-03-2018 IPR002645 STAS domain AM393_RS26860 06b7272978e988970262370df52df21d 559 Pfam PF00916 Sulfate permease family 29 411 2.8E-76 T 28-03-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 AM393_RS26860 06b7272978e988970262370df52df21d 559 ProSitePatterns PS01130 SLC26A transporters signature. 58 79 - T 28-03-2018 IPR018045 Sulphate anion transporter, conserved site GO:0008271|GO:0008272 Reactome: R-HSA-427601 AM393_RS26860 06b7272978e988970262370df52df21d 559 TIGRFAM TIGR00815 sulP: sulfate permease 18 555 1.1E-142 T 28-03-2018 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 AM393_RS26860 06b7272978e988970262370df52df21d 559 SUPERFAMILY SSF52091 451 557 1.22E-14 T 28-03-2018 IPR002645 STAS domain AM393_RS26860 06b7272978e988970262370df52df21d 559 Pfam PF01740 STAS domain 451 553 3.7E-11 T 28-03-2018 IPR002645 STAS domain AM393_RS28705 c5544fabb6de5182c47d7d8eaf1b9800 105 TIGRFAM TIGR02981 phageshock_pspE: phage shock operon rhodanese PspE 3 102 2.0E-56 T 28-03-2018 IPR014323 Phage shock protein, PspE KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 AM393_RS28705 c5544fabb6de5182c47d7d8eaf1b9800 105 SMART SM00450 7 103 5.1E-14 T 28-03-2018 IPR001763 Rhodanese-like domain AM393_RS28705 c5544fabb6de5182c47d7d8eaf1b9800 105 Pfam PF00581 Rhodanese-like domain 22 97 1.0E-13 T 28-03-2018 IPR001763 Rhodanese-like domain AM393_RS28705 c5544fabb6de5182c47d7d8eaf1b9800 105 SUPERFAMILY SSF52821 23 95 6.16E-20 T 28-03-2018 IPR001763 Rhodanese-like domain AM393_RS28705 c5544fabb6de5182c47d7d8eaf1b9800 105 Gene3D G3DSA:3.40.250.10 20 103 4.8E-20 T 28-03-2018 IPR001763 Rhodanese-like domain AM393_RS20220 27318482a5589d2348b8ec2dcef078c9 169 Gene3D G3DSA:3.40.50.300 31 148 1.2E-17 T 28-03-2018 AM393_RS20220 27318482a5589d2348b8ec2dcef078c9 169 TIGRFAM TIGR00623 sula: cell division inhibitor SulA 2 169 4.0E-90 T 28-03-2018 IPR004596 Cell division suppressor protein, SulA GO:0009432|GO:0051782 AM393_RS20220 27318482a5589d2348b8ec2dcef078c9 169 Hamap MF_01179 Cell division inhibitor SulA [sulA]. 1 169 41.936 T 28-03-2018 IPR004596 Cell division suppressor protein, SulA GO:0009432|GO:0051782 AM393_RS20220 27318482a5589d2348b8ec2dcef078c9 169 PIRSF PIRSF003093 1 169 7.3E-80 T 28-03-2018 IPR004596 Cell division suppressor protein, SulA GO:0009432|GO:0051782 AM393_RS20220 27318482a5589d2348b8ec2dcef078c9 169 Pfam PF03846 Cell division inhibitor SulA 6 119 9.2E-57 T 28-03-2018 IPR004596 Cell division suppressor protein, SulA GO:0009432|GO:0051782 AM393_RS20220 27318482a5589d2348b8ec2dcef078c9 169 SUPERFAMILY SSF52540 31 147 4.67E-30 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS01795 c010848fd25f3c6dc1ddabed9bb61720 381 Pfam PF00534 Glycosyl transferases group 1 212 329 4.5E-14 T 28-03-2018 IPR001296 Glycosyl transferase, family 1 AM393_RS01795 c010848fd25f3c6dc1ddabed9bb61720 381 SUPERFAMILY SSF53756 4 380 6.91E-48 T 28-03-2018 AM393_RS01795 c010848fd25f3c6dc1ddabed9bb61720 381 Gene3D G3DSA:3.40.50.2000 218 368 1.5E-17 T 28-03-2018 AM393_RS01795 c010848fd25f3c6dc1ddabed9bb61720 381 Gene3D G3DSA:3.40.50.2000 7 217 6.1E-14 T 28-03-2018 AM393_RS01795 c010848fd25f3c6dc1ddabed9bb61720 381 Pfam PF13439 Glycosyltransferase Family 4 15 207 1.0E-14 T 28-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 AM393_RS09790 0d695ae67341870dfc65183a4f24b607 207 SMART SM00072 3 187 4.4E-87 T 28-03-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit AM393_RS09790 0d695ae67341870dfc65183a4f24b607 207 ProSitePatterns PS00856 Guanylate kinase-like signature. 40 57 - T 28-03-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 AM393_RS09790 0d695ae67341870dfc65183a4f24b607 207 Gene3D G3DSA:3.40.50.300 82 188 1.1E-37 T 28-03-2018 AM393_RS09790 0d695ae67341870dfc65183a4f24b607 207 Gene3D G3DSA:3.30.63.10 52 81 1.3E-27 T 28-03-2018 AM393_RS09790 0d695ae67341870dfc65183a4f24b607 207 Pfam PF00625 Guanylate kinase 5 186 5.9E-70 T 28-03-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit AM393_RS09790 0d695ae67341870dfc65183a4f24b607 207 Hamap MF_00328 Guanylate kinase [gmk]. 2 187 38.589 T 28-03-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 AM393_RS09790 0d695ae67341870dfc65183a4f24b607 207 SUPERFAMILY SSF52540 3 189 1.58E-72 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS09790 0d695ae67341870dfc65183a4f24b607 207 Gene3D G3DSA:3.40.50.300 1 51 2.3E-4 T 28-03-2018 AM393_RS09790 0d695ae67341870dfc65183a4f24b607 207 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 4 184 1.7E-76 T 28-03-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 AM393_RS28580 ea0c74422c5d8fa6b023484c41851dde 118 SUPERFAMILY SSF51182 24 113 4.13E-18 T 28-03-2018 IPR011051 RmlC-like cupin domain AM393_RS28580 ea0c74422c5d8fa6b023484c41851dde 118 Pfam PF07883 Cupin domain 36 105 9.7E-13 T 28-03-2018 IPR013096 Cupin 2, conserved barrel AM393_RS28580 ea0c74422c5d8fa6b023484c41851dde 118 Gene3D G3DSA:2.60.120.10 2 118 2.6E-17 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AM393_RS14635 2438a75e23aaeb0fafe4995787316a06 454 PIRSF PIRSF005348 16 453 2.4E-155 T 28-03-2018 IPR004679 2-hydroxycarboxylate transporter GO:0008514|GO:0015711|GO:0016021 AM393_RS14635 2438a75e23aaeb0fafe4995787316a06 454 Pfam PF03390 2-hydroxycarboxylate transporter family 36 445 1.7E-140 T 28-03-2018 IPR004679 2-hydroxycarboxylate transporter GO:0008514|GO:0015711|GO:0016021 AM393_RS17920 64220be80f86500cd67153d9d1d3f472 265 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM393_RS17920 64220be80f86500cd67153d9d1d3f472 265 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 5.7E-11 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS17920 64220be80f86500cd67153d9d1d3f472 265 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 5.7E-11 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS17920 64220be80f86500cd67153d9d1d3f472 265 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 5.7E-11 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS17920 64220be80f86500cd67153d9d1d3f472 265 Gene3D G3DSA:3.40.50.720 39 265 8.8E-65 T 28-03-2018 AM393_RS17920 64220be80f86500cd67153d9d1d3f472 265 Gene3D G3DSA:3.40.50.720 1 38 2.1E-8 T 28-03-2018 AM393_RS17920 64220be80f86500cd67153d9d1d3f472 265 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 262 6.5E-64 T 28-03-2018 AM393_RS17920 64220be80f86500cd67153d9d1d3f472 265 SUPERFAMILY SSF51735 6 264 1.06E-80 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS17920 64220be80f86500cd67153d9d1d3f472 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 2.6E-42 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS17920 64220be80f86500cd67153d9d1d3f472 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 2.6E-42 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS17920 64220be80f86500cd67153d9d1d3f472 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 2.6E-42 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS17920 64220be80f86500cd67153d9d1d3f472 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 226 246 2.6E-42 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS17920 64220be80f86500cd67153d9d1d3f472 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 2.6E-42 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS17920 64220be80f86500cd67153d9d1d3f472 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 2.6E-42 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS20965 e35f9302299a10b269b0f88a8948c769 213 Gene3D G3DSA:1.10.3890.10 4 207 1.4E-79 T 28-03-2018 IPR007451 Uncharacterised protein family UPF0274 AM393_RS20965 e35f9302299a10b269b0f88a8948c769 213 ProDom PD037115 UPF0274 YCFC HI0638 METABOLISM UNCHARACTERIZED VV1342 PURINE INVOLVED SO2634 HFLD 9 205 4.0E-91 T 28-03-2018 IPR007451 Uncharacterised protein family UPF0274 AM393_RS20965 e35f9302299a10b269b0f88a8948c769 213 SUPERFAMILY SSF101322 2 210 3.92E-82 T 28-03-2018 IPR007451 Uncharacterised protein family UPF0274 AM393_RS20965 e35f9302299a10b269b0f88a8948c769 213 Pfam PF04356 Protein of unknown function (DUF489) 7 199 9.8E-75 T 28-03-2018 IPR007451 Uncharacterised protein family UPF0274 AM393_RS20965 e35f9302299a10b269b0f88a8948c769 213 Hamap MF_00695 High frequency lysogenization protein HflD [hflD]. 1 207 36.634 T 28-03-2018 IPR007451 Uncharacterised protein family UPF0274 AM393_RS22550 0525df22a3ac8b4d5c5a3f90008756cb 457 Gene3D G3DSA:3.40.50.300 221 451 1.6E-42 T 28-03-2018 AM393_RS22550 0525df22a3ac8b4d5c5a3f90008756cb 457 SUPERFAMILY SSF52540 72 350 4.14E-70 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS22550 0525df22a3ac8b4d5c5a3f90008756cb 457 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 151 159 - T 28-03-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AM393_RS22550 0525df22a3ac8b4d5c5a3f90008756cb 457 SMART SM00487 22 219 1.4E-56 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AM393_RS22550 0525df22a3ac8b4d5c5a3f90008756cb 457 Hamap MF_00965 ATP-dependent RNA helicase DbpA [dbpA]. 5 457 68.499 T 28-03-2018 IPR028619 ATP-dependent RNA helicase DbpA GO:0000027|GO:0003724 AM393_RS22550 0525df22a3ac8b4d5c5a3f90008756cb 457 Pfam PF00271 Helicase conserved C-terminal domain 228 336 1.8E-27 T 28-03-2018 IPR001650 Helicase, C-terminal AM393_RS22550 0525df22a3ac8b4d5c5a3f90008756cb 457 SMART SM00490 255 336 2.6E-28 T 28-03-2018 IPR001650 Helicase, C-terminal AM393_RS22550 0525df22a3ac8b4d5c5a3f90008756cb 457 Gene3D G3DSA:3.40.50.300 9 220 2.3E-57 T 28-03-2018 AM393_RS22550 0525df22a3ac8b4d5c5a3f90008756cb 457 Pfam PF03880 DbpA RNA binding domain 384 454 3.3E-21 T 28-03-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain AM393_RS22550 0525df22a3ac8b4d5c5a3f90008756cb 457 Pfam PF00270 DEAD/DEAH box helicase 27 190 3.3E-43 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AM393_RS06895 12bcac9c02fa3204c1792e7070ebc5e7 106 TIGRFAM TIGR00192 urease_beta: urease, beta subunit 1 101 7.5E-45 T 28-03-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AM393_RS06895 12bcac9c02fa3204c1792e7070ebc5e7 106 Pfam PF00699 Urease beta subunit 3 99 1.8E-45 T 28-03-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AM393_RS06895 12bcac9c02fa3204c1792e7070ebc5e7 106 Gene3D G3DSA:2.10.150.10 1 101 3.3E-47 T 28-03-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AM393_RS06895 12bcac9c02fa3204c1792e7070ebc5e7 106 SUPERFAMILY SSF51278 1 104 2.88E-48 T 28-03-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AM393_RS06895 12bcac9c02fa3204c1792e7070ebc5e7 106 Hamap MF_01954 Urease subunit beta [ureB]. 1 101 31.666 T 28-03-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AM393_RS11550 7548b7f63e4ba0b49198ae41ab8c2c20 263 PIRSF PIRSF005902 1 260 2.1E-74 T 28-03-2018 IPR001130 TatD family GO:0016788 AM393_RS11550 7548b7f63e4ba0b49198ae41ab8c2c20 263 SUPERFAMILY SSF51556 1 258 2.49E-84 T 28-03-2018 IPR032466 Metal-dependent hydrolase AM393_RS11550 7548b7f63e4ba0b49198ae41ab8c2c20 263 Gene3D G3DSA:3.20.20.140 1 262 5.5E-80 T 28-03-2018 AM393_RS11550 7548b7f63e4ba0b49198ae41ab8c2c20 263 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 123 133 - T 28-03-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 AM393_RS11550 7548b7f63e4ba0b49198ae41ab8c2c20 263 Hamap MF_00901 3'-5' ssDNA/RNA exonuclease TatD [tatD]. 1 259 63.811 T 28-03-2018 IPR024918 3'-5' ssDNA/RNA exonuclease TatD GO:0008408 AM393_RS11550 7548b7f63e4ba0b49198ae41ab8c2c20 263 Pfam PF01026 TatD related DNase 2 256 8.7E-68 T 28-03-2018 IPR001130 TatD family GO:0016788 AM393_RS11550 7548b7f63e4ba0b49198ae41ab8c2c20 263 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 189 205 - T 28-03-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 AM393_RS16640 97748eb98d4d1a98631394f3bf2f9965 685 Gene3D G3DSA:3.20.20.80 12 381 2.0E-87 T 28-03-2018 AM393_RS16640 97748eb98d4d1a98631394f3bf2f9965 685 Pfam PF02449 Beta-galactosidase 19 392 4.5E-154 T 28-03-2018 IPR013529 Glycoside hydrolase, family 42, N-terminal GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AM393_RS16640 97748eb98d4d1a98631394f3bf2f9965 685 Pfam PF08533 Beta-galactosidase C-terminal domain 626 683 3.4E-11 T 28-03-2018 IPR013739 Beta-galactosidase C-terminal GO:0004565|GO:0006012 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AM393_RS16640 97748eb98d4d1a98631394f3bf2f9965 685 Pfam PF08532 Beta-galactosidase trimerisation domain 403 615 3.9E-73 T 28-03-2018 IPR013738 Beta-galactosidase trimerisation GO:0004565|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AM393_RS16640 97748eb98d4d1a98631394f3bf2f9965 685 Gene3D G3DSA:3.40.50.880 400 619 1.2E-56 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AM393_RS16640 97748eb98d4d1a98631394f3bf2f9965 685 PIRSF PIRSF001084 6 684 6.1E-245 T 28-03-2018 IPR003476 Glycoside hydrolase, family 42 GO:0004565|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AM393_RS16640 97748eb98d4d1a98631394f3bf2f9965 685 SUPERFAMILY SSF52317 401 615 3.43E-58 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AM393_RS16640 97748eb98d4d1a98631394f3bf2f9965 685 Gene3D G3DSA:2.60.40.1180 624 683 6.1E-14 T 28-03-2018 AM393_RS16640 97748eb98d4d1a98631394f3bf2f9965 685 SUPERFAMILY SSF51445 6 372 7.5E-115 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily AM393_RS09685 f476bb03474b08ee77a4442a0eea35c3 159 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 5 63 5.4E-18 T 28-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AM393_RS09685 f476bb03474b08ee77a4442a0eea35c3 159 Gene3D G3DSA:3.40.50.620 2 159 1.2E-34 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM393_RS09685 f476bb03474b08ee77a4442a0eea35c3 159 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 3 159 36.191 T 28-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AM393_RS09685 f476bb03474b08ee77a4442a0eea35c3 159 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 12 78 0.003 T 28-03-2018 AM393_RS09685 f476bb03474b08ee77a4442a0eea35c3 159 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 5 157 5.2E-61 T 28-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AM393_RS09685 f476bb03474b08ee77a4442a0eea35c3 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 3 21 3.8E-52 T 28-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AM393_RS09685 f476bb03474b08ee77a4442a0eea35c3 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 113 135 3.8E-52 T 28-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AM393_RS09685 f476bb03474b08ee77a4442a0eea35c3 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 86 102 3.8E-52 T 28-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AM393_RS09685 f476bb03474b08ee77a4442a0eea35c3 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 21 42 3.8E-52 T 28-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AM393_RS09685 f476bb03474b08ee77a4442a0eea35c3 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 50 74 3.8E-52 T 28-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AM393_RS09685 f476bb03474b08ee77a4442a0eea35c3 159 Pfam PF01467 Cytidylyltransferase-like 6 134 5.8E-22 T 28-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AM393_RS09685 f476bb03474b08ee77a4442a0eea35c3 159 SUPERFAMILY SSF52374 3 156 1.34E-45 T 28-03-2018 AM393_RS19325 58040c9a02e7e7d4717751ce82d13d96 411 Pfam PF00994 Probable molybdopterin binding domain 181 317 6.4E-28 T 28-03-2018 IPR001453 MoaB/Mog domain AM393_RS19325 58040c9a02e7e7d4717751ce82d13d96 411 Gene3D G3DSA:3.40.980.10 151 324 1.1E-53 T 28-03-2018 IPR001453 MoaB/Mog domain AM393_RS19325 58040c9a02e7e7d4717751ce82d13d96 411 SMART SM00852 181 318 1.0E-42 T 28-03-2018 IPR001453 MoaB/Mog domain AM393_RS19325 58040c9a02e7e7d4717751ce82d13d96 411 Gene3D G3DSA:3.90.105.10 27 64 1.6E-9 T 28-03-2018 AM393_RS19325 58040c9a02e7e7d4717751ce82d13d96 411 Gene3D G3DSA:2.170.190.11 65 142 4.0E-29 T 28-03-2018 AM393_RS19325 58040c9a02e7e7d4717751ce82d13d96 411 Pfam PF03454 MoeA C-terminal region (domain IV) 332 404 5.4E-21 T 28-03-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AM393_RS19325 58040c9a02e7e7d4717751ce82d13d96 411 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 254 287 - T 28-03-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 AM393_RS19325 58040c9a02e7e7d4717751ce82d13d96 411 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 177 314 4.0E-34 T 28-03-2018 IPR001453 MoaB/Mog domain AM393_RS19325 58040c9a02e7e7d4717751ce82d13d96 411 SUPERFAMILY SSF53218 178 322 2.22E-43 T 28-03-2018 IPR001453 MoaB/Mog domain AM393_RS19325 58040c9a02e7e7d4717751ce82d13d96 411 Pfam PF03453 MoeA N-terminal region (domain I and II) 9 168 2.1E-46 T 28-03-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AM393_RS19325 58040c9a02e7e7d4717751ce82d13d96 411 Gene3D G3DSA:2.40.340.10 330 402 1.1E-21 T 28-03-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AM393_RS19325 58040c9a02e7e7d4717751ce82d13d96 411 SUPERFAMILY SSF63867 329 408 1.05E-25 T 28-03-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AM393_RS19325 58040c9a02e7e7d4717751ce82d13d96 411 SUPERFAMILY SSF63882 7 177 6.67E-58 T 28-03-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AM393_RS19905 c085adac3aeb2986e5ee7a9829d83f13 203 Gene3D G3DSA:2.50.20.10 19 202 1.1E-40 T 28-03-2018 AM393_RS19905 c085adac3aeb2986e5ee7a9829d83f13 203 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 33 191 5.5E-58 T 28-03-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like AM393_RS19905 c085adac3aeb2986e5ee7a9829d83f13 203 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 6 201 32.514 T 28-03-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 AM393_RS19905 c085adac3aeb2986e5ee7a9829d83f13 203 TIGRFAM TIGR00547 lolA: outer membrane lipoprotein carrier protein LolA 1 203 1.4E-118 T 28-03-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 AM393_RS19905 c085adac3aeb2986e5ee7a9829d83f13 203 SUPERFAMILY SSF89392 22 202 1.49E-56 T 28-03-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX AM393_RS15635 4eeec4c816ee28ad491ead0d782c1e51 407 SUPERFAMILY SSF54292 37 124 4.99E-22 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AM393_RS15635 4eeec4c816ee28ad491ead0d782c1e51 407 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 43 115 2.3E-10 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AM393_RS15635 4eeec4c816ee28ad491ead0d782c1e51 407 SUPERFAMILY SSF63380 105 272 1.86E-37 T 28-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AM393_RS15635 4eeec4c816ee28ad491ead0d782c1e51 407 Gene3D G3DSA:3.40.50.80 257 401 9.1E-31 T 28-03-2018 AM393_RS15635 4eeec4c816ee28ad491ead0d782c1e51 407 Gene3D G3DSA:2.40.30.10 137 256 1.8E-32 T 28-03-2018 AM393_RS15635 4eeec4c816ee28ad491ead0d782c1e51 407 PIRSF PIRSF000044 1 407 2.4E-221 T 28-03-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 AM393_RS15635 4eeec4c816ee28ad491ead0d782c1e51 407 SUPERFAMILY SSF52343 255 402 5.89E-39 T 28-03-2018 AM393_RS15635 4eeec4c816ee28ad491ead0d782c1e51 407 TIGRFAM TIGR01941 nqrF: NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit 3 407 2.5E-229 T 28-03-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 AM393_RS15635 4eeec4c816ee28ad491ead0d782c1e51 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 373 381 9.0E-7 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AM393_RS15635 4eeec4c816ee28ad491ead0d782c1e51 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 242 251 9.0E-7 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AM393_RS15635 4eeec4c816ee28ad491ead0d782c1e51 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 209 216 9.0E-7 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AM393_RS15635 4eeec4c816ee28ad491ead0d782c1e51 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 276 295 9.0E-7 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AM393_RS15635 4eeec4c816ee28ad491ead0d782c1e51 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 314 325 9.0E-7 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AM393_RS15635 4eeec4c816ee28ad491ead0d782c1e51 407 Hamap MF_00430 Na(+)-translocating NADH-quinone reductase subunit F [nqrF]. 1 407 64.281 T 28-03-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 AM393_RS15635 4eeec4c816ee28ad491ead0d782c1e51 407 Gene3D G3DSA:3.10.20.30 27 136 7.3E-21 T 28-03-2018 IPR012675 Beta-grasp domain AM393_RS15635 4eeec4c816ee28ad491ead0d782c1e51 407 Pfam PF00175 Oxidoreductase NAD-binding domain 277 386 3.2E-17 T 28-03-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AM393_RS15635 4eeec4c816ee28ad491ead0d782c1e51 407 Pfam PF00970 Oxidoreductase FAD-binding domain 204 266 4.5E-9 T 28-03-2018 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 AM393_RS10080 31aed14fabc763145cf4882cacd591d1 408 Gene3D G3DSA:3.40.190.10 196 288 7.7E-20 T 28-03-2018 AM393_RS10080 31aed14fabc763145cf4882cacd591d1 408 SUPERFAMILY SSF46785 9 88 3.81E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS10080 31aed14fabc763145cf4882cacd591d1 408 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 112 170 7.7E-12 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS10080 31aed14fabc763145cf4882cacd591d1 408 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 14 71 4.1E-18 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS10080 31aed14fabc763145cf4882cacd591d1 408 Pfam PF03466 LysR substrate binding domain 196 402 3.0E-35 T 28-03-2018 IPR005119 LysR, substrate-binding AM393_RS10080 31aed14fabc763145cf4882cacd591d1 408 SUPERFAMILY SSF53850 197 405 1.92E-36 T 28-03-2018 AM393_RS10080 31aed14fabc763145cf4882cacd591d1 408 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 38 48 3.4E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS10080 31aed14fabc763145cf4882cacd591d1 408 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 27 38 3.4E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS10080 31aed14fabc763145cf4882cacd591d1 408 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 48 59 3.4E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS10080 31aed14fabc763145cf4882cacd591d1 408 SUPERFAMILY SSF46785 104 219 3.11E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS10080 31aed14fabc763145cf4882cacd591d1 408 Gene3D G3DSA:3.40.190.10 289 374 7.2E-14 T 28-03-2018 AM393_RS10080 31aed14fabc763145cf4882cacd591d1 408 Gene3D G3DSA:1.10.10.10 103 194 2.3E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS10080 31aed14fabc763145cf4882cacd591d1 408 Gene3D G3DSA:1.10.10.10 1 95 7.0E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS20215 aaf93df7e3f9d3f75bde520bc1a96f86 356 ProSitePatterns PS01068 OmpA-like domain. 267 311 - T 28-03-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 AM393_RS20215 aaf93df7e3f9d3f75bde520bc1a96f86 356 PRINTS PR01022 Outer membrane protein A signature 221 236 2.0E-72 T 28-03-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 AM393_RS20215 aaf93df7e3f9d3f75bde520bc1a96f86 356 PRINTS PR01022 Outer membrane protein A signature 250 269 2.0E-72 T 28-03-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 AM393_RS20215 aaf93df7e3f9d3f75bde520bc1a96f86 356 PRINTS PR01022 Outer membrane protein A signature 112 128 2.0E-72 T 28-03-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 AM393_RS20215 aaf93df7e3f9d3f75bde520bc1a96f86 356 PRINTS PR01022 Outer membrane protein A signature 289 308 2.0E-72 T 28-03-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 AM393_RS20215 aaf93df7e3f9d3f75bde520bc1a96f86 356 PRINTS PR01022 Outer membrane protein A signature 323 336 2.0E-72 T 28-03-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 AM393_RS20215 aaf93df7e3f9d3f75bde520bc1a96f86 356 PRINTS PR01022 Outer membrane protein A signature 189 203 2.0E-72 T 28-03-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 AM393_RS20215 aaf93df7e3f9d3f75bde520bc1a96f86 356 PRINTS PR01022 Outer membrane protein A signature 175 189 2.0E-72 T 28-03-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 AM393_RS20215 aaf93df7e3f9d3f75bde520bc1a96f86 356 SUPERFAMILY SSF56925 22 204 5.76E-41 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AM393_RS20215 aaf93df7e3f9d3f75bde520bc1a96f86 356 SUPERFAMILY SSF103088 223 344 3.79E-35 T 28-03-2018 IPR006665 OmpA-like domain AM393_RS20215 aaf93df7e3f9d3f75bde520bc1a96f86 356 PRINTS PR01021 OMPA domain signature 265 280 9.2E-24 T 28-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AM393_RS20215 aaf93df7e3f9d3f75bde520bc1a96f86 356 PRINTS PR01021 OMPA domain signature 233 255 9.2E-24 T 28-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AM393_RS20215 aaf93df7e3f9d3f75bde520bc1a96f86 356 PRINTS PR01021 OMPA domain signature 280 296 9.2E-24 T 28-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AM393_RS20215 aaf93df7e3f9d3f75bde520bc1a96f86 356 Gene3D G3DSA:2.40.160.20 9 216 5.0E-52 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AM393_RS20215 aaf93df7e3f9d3f75bde520bc1a96f86 356 Pfam PF00691 OmpA family 232 327 3.4E-23 T 28-03-2018 IPR006665 OmpA-like domain AM393_RS20215 aaf93df7e3f9d3f75bde520bc1a96f86 356 Pfam PF01389 OmpA-like transmembrane domain 23 204 1.7E-74 T 28-03-2018 IPR000498 Outer membrane protein OmpA-like, transmembrane domain GO:0009279|GO:0016021 AM393_RS20215 aaf93df7e3f9d3f75bde520bc1a96f86 356 Gene3D G3DSA:3.30.1330.60 217 355 2.6E-40 T 28-03-2018 IPR006665 OmpA-like domain AM393_RS13300 9c6c2f212db1f76d89840f9fc67d77c8 503 SUPERFAMILY SSF52949 1 184 5.12E-52 T 28-03-2018 AM393_RS13300 9c6c2f212db1f76d89840f9fc67d77c8 503 PRINTS PR00481 Cytosol aminopeptidase signature 287 308 6.0E-54 T 28-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AM393_RS13300 9c6c2f212db1f76d89840f9fc67d77c8 503 PRINTS PR00481 Cytosol aminopeptidase signature 374 389 6.0E-54 T 28-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AM393_RS13300 9c6c2f212db1f76d89840f9fc67d77c8 503 PRINTS PR00481 Cytosol aminopeptidase signature 324 345 6.0E-54 T 28-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AM393_RS13300 9c6c2f212db1f76d89840f9fc67d77c8 503 PRINTS PR00481 Cytosol aminopeptidase signature 346 366 6.0E-54 T 28-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AM393_RS13300 9c6c2f212db1f76d89840f9fc67d77c8 503 PRINTS PR00481 Cytosol aminopeptidase signature 265 282 6.0E-54 T 28-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AM393_RS13300 9c6c2f212db1f76d89840f9fc67d77c8 503 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 19 147 8.8E-34 T 28-03-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AM393_RS13300 9c6c2f212db1f76d89840f9fc67d77c8 503 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 350 357 - T 28-03-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AM393_RS13300 9c6c2f212db1f76d89840f9fc67d77c8 503 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 3 498 41.354 T 28-03-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 AM393_RS13300 9c6c2f212db1f76d89840f9fc67d77c8 503 SUPERFAMILY SSF53187 180 496 1.38E-124 T 28-03-2018 AM393_RS13300 9c6c2f212db1f76d89840f9fc67d77c8 503 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 186 489 1.4E-122 T 28-03-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AM393_RS13300 9c6c2f212db1f76d89840f9fc67d77c8 503 Gene3D G3DSA:3.40.630.10 170 500 2.2E-133 T 28-03-2018 AM393_RS13300 9c6c2f212db1f76d89840f9fc67d77c8 503 Gene3D G3DSA:3.40.220.10 1 157 1.3E-30 T 28-03-2018 AM393_RS24820 5542a9d830971f48d8a96ef4b3454be7 329 SUPERFAMILY SSF51679 2 329 1.65E-63 T 28-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AM393_RS24820 5542a9d830971f48d8a96ef4b3454be7 329 TIGRFAM TIGR04027 LLM_KPN_01858: putative FMN-dependent luciferase-like monooxygenase, KPN_01858 family 4 328 2.0E-170 T 28-03-2018 IPR024003 Putative luciferase-like monooxygenase, KPN01858 AM393_RS24820 5542a9d830971f48d8a96ef4b3454be7 329 Pfam PF00296 Luciferase-like monooxygenase 17 288 1.6E-41 T 28-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AM393_RS24820 5542a9d830971f48d8a96ef4b3454be7 329 Gene3D G3DSA:3.20.20.30 2 329 5.4E-63 T 28-03-2018 AM393_RS23275 d29a2dabe0af5a9b9b4169200719cc82 487 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 23 185 1.1E-49 T 28-03-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 AM393_RS23275 d29a2dabe0af5a9b9b4169200719cc82 487 PRINTS PR00084 Mannitol dehydrogenase signature 176 189 1.7E-21 T 28-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AM393_RS23275 d29a2dabe0af5a9b9b4169200719cc82 487 PRINTS PR00084 Mannitol dehydrogenase signature 24 34 1.7E-21 T 28-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AM393_RS23275 d29a2dabe0af5a9b9b4169200719cc82 487 PRINTS PR00084 Mannitol dehydrogenase signature 215 228 1.7E-21 T 28-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AM393_RS23275 d29a2dabe0af5a9b9b4169200719cc82 487 PRINTS PR00084 Mannitol dehydrogenase signature 245 260 1.7E-21 T 28-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AM393_RS23275 d29a2dabe0af5a9b9b4169200719cc82 487 Gene3D G3DSA:3.40.50.720 1 278 5.2E-107 T 28-03-2018 AM393_RS23275 d29a2dabe0af5a9b9b4169200719cc82 487 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 215 227 - T 28-03-2018 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AM393_RS23275 d29a2dabe0af5a9b9b4169200719cc82 487 SUPERFAMILY SSF51735 4 278 5.51E-97 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS23275 d29a2dabe0af5a9b9b4169200719cc82 487 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 213 458 3.5E-94 T 28-03-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 AM393_RS23275 d29a2dabe0af5a9b9b4169200719cc82 487 SUPERFAMILY SSF48179 280 482 1.8E-63 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AM393_RS23275 d29a2dabe0af5a9b9b4169200719cc82 487 Gene3D G3DSA:1.10.1040.10 279 486 9.2E-67 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AM393_RS17595 07ba3b85559e1d88791a659c1eaba91b 458 PIRSF PIRSF006060 1 456 1.5E-77 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AM393_RS17595 07ba3b85559e1d88791a659c1eaba91b 458 ProSitePatterns PS00218 Amino acid permeases signature. 51 81 - T 28-03-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 AM393_RS17595 07ba3b85559e1d88791a659c1eaba91b 458 Pfam PF00324 Amino acid permease 26 453 2.5E-117 T 28-03-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 AM393_RS27440 21e4b73f4c74abc70ecd5330b99563dc 245 Gene3D G3DSA:2.70.70.10 21 222 3.1E-35 T 28-03-2018 AM393_RS27440 21e4b73f4c74abc70ecd5330b99563dc 245 Pfam PF01551 Peptidase family M23 122 215 7.1E-26 T 28-03-2018 IPR016047 Peptidase M23 AM393_RS27440 21e4b73f4c74abc70ecd5330b99563dc 245 SUPERFAMILY SSF51261 6 217 2.04E-47 T 28-03-2018 IPR011055 Duplicated hybrid motif AM393_RS01865 d5c047adc28be22c8ab2726ed63228b9 233 SMART SM00862 156 231 1.4E-9 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM393_RS01865 d5c047adc28be22c8ab2726ed63228b9 233 Pfam PF00486 Transcriptional regulatory protein, C terminal 158 215 3.7E-11 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM393_RS01865 d5c047adc28be22c8ab2726ed63228b9 233 Gene3D G3DSA:1.10.10.10 122 232 2.0E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS01865 d5c047adc28be22c8ab2726ed63228b9 233 SMART SM00448 3 113 2.4E-23 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM393_RS01865 d5c047adc28be22c8ab2726ed63228b9 233 Pfam PF00072 Response regulator receiver domain 6 113 1.3E-18 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM393_RS01865 d5c047adc28be22c8ab2726ed63228b9 233 Gene3D G3DSA:3.40.50.2300 2 121 6.9E-25 T 28-03-2018 AM393_RS01865 d5c047adc28be22c8ab2726ed63228b9 233 SUPERFAMILY SSF46894 150 231 5.39E-12 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM393_RS01865 d5c047adc28be22c8ab2726ed63228b9 233 SUPERFAMILY SSF52172 3 125 2.28E-27 T 28-03-2018 IPR011006 CheY-like superfamily AM393_RS03755 07cddb69cfdb79b7423af75a2f7f3f63 86 Pfam PF12838 4Fe-4S dicluster domain 8 55 3.5E-6 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM393_RS03755 07cddb69cfdb79b7423af75a2f7f3f63 86 Gene3D G3DSA:3.30.70.20 1 20 2.2E-5 T 28-03-2018 AM393_RS03755 07cddb69cfdb79b7423af75a2f7f3f63 86 SUPERFAMILY SSF54862 5 67 2.02E-17 T 28-03-2018 AM393_RS03755 07cddb69cfdb79b7423af75a2f7f3f63 86 Gene3D G3DSA:3.30.70.20 21 58 4.5E-8 T 28-03-2018 AM393_RS03755 07cddb69cfdb79b7423af75a2f7f3f63 86 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM393_RS00895 5d37e3bcde100db69c691065cfc1ed2a 240 SUPERFAMILY SSF75516 8 170 9.55E-34 T 28-03-2018 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain AM393_RS00895 5d37e3bcde100db69c691065cfc1ed2a 240 Gene3D G3DSA:3.30.450.80 1 175 2.5E-40 T 28-03-2018 AM393_RS00895 5d37e3bcde100db69c691065cfc1ed2a 240 Pfam PF03472 Autoinducer binding domain 24 154 7.3E-30 T 28-03-2018 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain AM393_RS00895 5d37e3bcde100db69c691065cfc1ed2a 240 SMART SM00421 177 234 7.1E-18 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS00895 5d37e3bcde100db69c691065cfc1ed2a 240 ProSitePatterns PS00622 LuxR-type HTH domain signature. 194 221 - T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS00895 5d37e3bcde100db69c691065cfc1ed2a 240 SUPERFAMILY SSF46894 164 240 8.16E-18 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM393_RS00895 5d37e3bcde100db69c691065cfc1ed2a 240 Gene3D G3DSA:1.10.10.10 176 240 1.6E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS00895 5d37e3bcde100db69c691065cfc1ed2a 240 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 194 210 8.8E-11 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS00895 5d37e3bcde100db69c691065cfc1ed2a 240 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 194 8.8E-11 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS00895 5d37e3bcde100db69c691065cfc1ed2a 240 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 210 222 8.8E-11 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS00895 5d37e3bcde100db69c691065cfc1ed2a 240 Pfam PF00196 Bacterial regulatory proteins, luxR family 179 234 7.4E-22 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS14560 2fd75e1addf120953e110005677a86c3 77 Pfam PF06004 Bacterial protein of unknown function (DUF903) 26 74 3.9E-18 T 28-03-2018 IPR010305 Protein of unknown function DUF903 AM393_RS14560 2fd75e1addf120953e110005677a86c3 77 Gene3D G3DSA:2.30.30.100 23 75 1.1E-23 T 28-03-2018 AM393_RS14560 2fd75e1addf120953e110005677a86c3 77 SUPERFAMILY SSF50182 23 75 2.23E-14 T 28-03-2018 IPR010920 LSM domain AM393_RS05080 4626461640e811d0691cfcc278e977dc 366 SUPERFAMILY SSF53335 184 296 2.13E-12 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM393_RS05080 4626461640e811d0691cfcc278e977dc 366 Pfam PF01728 FtsJ-like methyltransferase 186 279 8.7E-8 T 28-03-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 AM393_RS05080 4626461640e811d0691cfcc278e977dc 366 PIRSF PIRSF028774 1 360 6.7E-192 T 28-03-2018 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 AM393_RS05080 4626461640e811d0691cfcc278e977dc 366 Hamap MF_01551 Ribosomal RNA large subunit methyltransferase M [rlmM]. 1 355 86.212 T 28-03-2018 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 AM393_RS05080 4626461640e811d0691cfcc278e977dc 366 Gene3D G3DSA:3.40.50.150 176 357 6.9E-21 T 28-03-2018 AM393_RS25200 56bf26bbdf2a48d3bdf16c94316a5ba3 470 Gene3D G3DSA:3.90.1150.10 371 469 3.8E-24 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM393_RS25200 56bf26bbdf2a48d3bdf16c94316a5ba3 470 Gene3D G3DSA:3.40.640.10 143 370 2.2E-44 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM393_RS25200 56bf26bbdf2a48d3bdf16c94316a5ba3 470 SUPERFAMILY SSF53383 92 467 6.12E-93 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM393_RS25200 56bf26bbdf2a48d3bdf16c94316a5ba3 470 SMART SM00345 7 66 2.3E-11 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM393_RS25200 56bf26bbdf2a48d3bdf16c94316a5ba3 470 Gene3D G3DSA:1.10.10.10 1 68 2.3E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS25200 56bf26bbdf2a48d3bdf16c94316a5ba3 470 Pfam PF00392 Bacterial regulatory proteins, gntR family 3 66 1.4E-11 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM393_RS25200 56bf26bbdf2a48d3bdf16c94316a5ba3 470 Pfam PF00155 Aminotransferase class I and II 146 447 3.1E-32 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AM393_RS25200 56bf26bbdf2a48d3bdf16c94316a5ba3 470 SUPERFAMILY SSF46785 2 70 2.51E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS27795 374dd8b27e9158f30694776b149e760e 399 ProSitePatterns PS00216 Sugar transport proteins signature 1. 63 79 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM393_RS27795 374dd8b27e9158f30694776b149e760e 399 Pfam PF07690 Major Facilitator Superfamily 11 225 3.5E-31 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS27795 374dd8b27e9158f30694776b149e760e 399 PRINTS PR01035 Tetracycline resistance protein signature 45 64 4.6E-157 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AM393_RS27795 374dd8b27e9158f30694776b149e760e 399 PRINTS PR01035 Tetracycline resistance protein signature 161 181 4.6E-157 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AM393_RS27795 374dd8b27e9158f30694776b149e760e 399 PRINTS PR01035 Tetracycline resistance protein signature 248 268 4.6E-157 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AM393_RS27795 374dd8b27e9158f30694776b149e760e 399 PRINTS PR01035 Tetracycline resistance protein signature 301 321 4.6E-157 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AM393_RS27795 374dd8b27e9158f30694776b149e760e 399 PRINTS PR01035 Tetracycline resistance protein signature 133 155 4.6E-157 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AM393_RS27795 374dd8b27e9158f30694776b149e760e 399 PRINTS PR01035 Tetracycline resistance protein signature 366 385 4.6E-157 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AM393_RS27795 374dd8b27e9158f30694776b149e760e 399 PRINTS PR01035 Tetracycline resistance protein signature 16 32 4.6E-157 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AM393_RS27795 374dd8b27e9158f30694776b149e760e 399 PRINTS PR01035 Tetracycline resistance protein signature 76 100 4.6E-157 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AM393_RS27795 374dd8b27e9158f30694776b149e760e 399 PRINTS PR01035 Tetracycline resistance protein signature 219 236 4.6E-157 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AM393_RS27795 374dd8b27e9158f30694776b149e760e 399 PRINTS PR01035 Tetracycline resistance protein signature 336 359 4.6E-157 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AM393_RS27795 374dd8b27e9158f30694776b149e760e 399 PRINTS PR01035 Tetracycline resistance protein signature 103 124 4.6E-157 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AM393_RS27795 374dd8b27e9158f30694776b149e760e 399 PRINTS PR01035 Tetracycline resistance protein signature 276 297 4.6E-157 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AM393_RS27795 374dd8b27e9158f30694776b149e760e 399 TIGRFAM TIGR00880 2_A_01_02: multidrug resistance protein 46 183 7.3E-39 T 28-03-2018 IPR004734 Multidrug resistance protein GO:0015238|GO:0015893|GO:0016021 Reactome: R-HSA-442660 AM393_RS27795 374dd8b27e9158f30694776b149e760e 399 Gene3D G3DSA:1.20.1250.20 3 198 4.8E-34 T 28-03-2018 AM393_RS27795 374dd8b27e9158f30694776b149e760e 399 Gene3D G3DSA:1.20.1250.20 200 394 2.9E-20 T 28-03-2018 AM393_RS27795 374dd8b27e9158f30694776b149e760e 399 SUPERFAMILY SSF103473 3 387 2.09E-62 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS21255 42d357a6a8881ffa652e4e6bb1d4326d 294 Pfam PF01263 Aldose 1-epimerase 28 268 3.8E-43 T 28-03-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 AM393_RS21255 42d357a6a8881ffa652e4e6bb1d4326d 294 SUPERFAMILY SSF74650 8 274 1.19E-68 T 28-03-2018 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 AM393_RS21255 42d357a6a8881ffa652e4e6bb1d4326d 294 Gene3D G3DSA:2.70.98.10 1 294 1.8E-68 T 28-03-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 AM393_RS21255 42d357a6a8881ffa652e4e6bb1d4326d 294 PIRSF PIRSF016020 10 294 2.7E-55 T 28-03-2018 IPR025532 Glucose-6-phosphate 1-epimerase KEGG: 00010+5.1.3.15 AM393_RS20350 a8d3d2c09e53305725bcfe318d97a3bf 313 Gene3D G3DSA:3.40.190.10 92 177 2.6E-13 T 28-03-2018 AM393_RS20350 a8d3d2c09e53305725bcfe318d97a3bf 313 Gene3D G3DSA:1.10.10.10 6 90 2.4E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS20350 a8d3d2c09e53305725bcfe318d97a3bf 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 9.5E-17 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS20350 a8d3d2c09e53305725bcfe318d97a3bf 313 Pfam PF03466 LysR substrate binding domain 91 294 5.5E-38 T 28-03-2018 IPR005119 LysR, substrate-binding AM393_RS20350 a8d3d2c09e53305725bcfe318d97a3bf 313 SUPERFAMILY SSF53850 93 296 1.48E-40 T 28-03-2018 AM393_RS20350 a8d3d2c09e53305725bcfe318d97a3bf 313 SUPERFAMILY SSF46785 7 114 7.0E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS20350 a8d3d2c09e53305725bcfe318d97a3bf 313 Gene3D G3DSA:3.40.190.10 178 267 4.0E-27 T 28-03-2018 AM393_RS08700 522e68c00f37dfcdf20646ec74033f60 252 Pfam PF08220 DeoR-like helix-turn-helix domain 6 61 3.7E-24 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM393_RS08700 522e68c00f37dfcdf20646ec74033f60 252 SUPERFAMILY SSF46785 3 74 1.9E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS08700 522e68c00f37dfcdf20646ec74033f60 252 Gene3D G3DSA:1.10.10.10 1 61 1.6E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS08700 522e68c00f37dfcdf20646ec74033f60 252 Gene3D G3DSA:3.40.50.1360 72 235 5.0E-41 T 28-03-2018 AM393_RS08700 522e68c00f37dfcdf20646ec74033f60 252 SUPERFAMILY SSF100950 73 234 3.27E-30 T 28-03-2018 AM393_RS08700 522e68c00f37dfcdf20646ec74033f60 252 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 28-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 AM393_RS08700 522e68c00f37dfcdf20646ec74033f60 252 SMART SM00420 6 58 2.1E-25 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM393_RS08700 522e68c00f37dfcdf20646ec74033f60 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 5.5E-12 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM393_RS08700 522e68c00f37dfcdf20646ec74033f60 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 5.5E-12 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM393_RS08700 522e68c00f37dfcdf20646ec74033f60 252 Pfam PF00455 DeoR C terminal sensor domain 74 231 7.1E-55 T 28-03-2018 IPR014036 DeoR C-terminal sensor domain AM393_RS08700 522e68c00f37dfcdf20646ec74033f60 252 SMART SM01134 72 233 1.9E-71 T 28-03-2018 AM393_RS06805 7a9f35f3a4362c136bb7909af318d49d 223 Hamap MF_01188 UPF0441 protein YgiB [ygiB]. 1 223 36.003 T 28-03-2018 IPR009576 Biofilm formation YgiB AM393_RS06805 7a9f35f3a4362c136bb7909af318d49d 223 Pfam PF06693 Protein of unknown function (DUF1190) 41 208 1.2E-56 T 28-03-2018 IPR009576 Biofilm formation YgiB AM393_RS11785 95d8d5f2d7d5228144508b8b5656e532 257 Pfam PF00293 NUDIX domain 132 234 6.9E-17 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AM393_RS11785 95d8d5f2d7d5228144508b8b5656e532 257 Gene3D G3DSA:3.90.79.10 126 257 2.3E-34 T 28-03-2018 AM393_RS11785 95d8d5f2d7d5228144508b8b5656e532 257 SUPERFAMILY SSF55811 3 96 2.32E-29 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 AM393_RS11785 95d8d5f2d7d5228144508b8b5656e532 257 ProSitePatterns PS00893 Nudix box signature. 159 180 - T 28-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AM393_RS11785 95d8d5f2d7d5228144508b8b5656e532 257 Hamap MF_00297 NADH pyrophosphatase [nudC]. 1 257 45.996 T 28-03-2018 IPR022925 NADH pyrophosphatase NudC GO:0000210 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 AM393_RS11785 95d8d5f2d7d5228144508b8b5656e532 257 SUPERFAMILY SSF55811 79 241 6.02E-39 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 AM393_RS11785 95d8d5f2d7d5228144508b8b5656e532 257 Pfam PF09297 NADH pyrophosphatase zinc ribbon domain 93 124 6.6E-12 T 28-03-2018 IPR015376 Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 AM393_RS04260 821b0c24b2817ffb670803832031239f 450 Gene3D G3DSA:3.90.1150.10 359 449 4.8E-15 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM393_RS04260 821b0c24b2817ffb670803832031239f 450 SUPERFAMILY SSF46785 6 74 9.37E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS04260 821b0c24b2817ffb670803832031239f 450 SUPERFAMILY SSF53383 67 448 5.54E-79 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM393_RS04260 821b0c24b2817ffb670803832031239f 450 Gene3D G3DSA:3.40.640.10 118 358 7.1E-39 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM393_RS04260 821b0c24b2817ffb670803832031239f 450 Pfam PF00155 Aminotransferase class I and II 131 399 4.1E-22 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AM393_RS04260 821b0c24b2817ffb670803832031239f 450 Gene3D G3DSA:1.10.10.10 2 73 1.7E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS04260 821b0c24b2817ffb670803832031239f 450 SMART SM00345 12 71 1.4E-12 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM393_RS04260 821b0c24b2817ffb670803832031239f 450 Pfam PF00392 Bacterial regulatory proteins, gntR family 8 71 6.7E-16 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM393_RS21750 65ac0cfe696c2b0858bbc1b1fe2b2560 108 Pfam PF01253 Translation initiation factor SUI1 32 101 9.7E-18 T 28-03-2018 IPR001950 SUI1 domain GO:0003743|GO:0006413 AM393_RS21750 65ac0cfe696c2b0858bbc1b1fe2b2560 108 Gene3D G3DSA:3.30.780.10 16 106 3.7E-19 T 28-03-2018 IPR001950 SUI1 domain GO:0003743|GO:0006413 AM393_RS21750 65ac0cfe696c2b0858bbc1b1fe2b2560 108 PIRSF PIRSF037511 1 108 3.2E-35 T 28-03-2018 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 AM393_RS21750 65ac0cfe696c2b0858bbc1b1fe2b2560 108 TIGRFAM TIGR01158 SUI1_rel: putative translation initiation factor SUI1 8 108 1.5E-39 T 28-03-2018 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 AM393_RS21750 65ac0cfe696c2b0858bbc1b1fe2b2560 108 SUPERFAMILY SSF55159 5 104 1.29E-24 T 28-03-2018 IPR001950 SUI1 domain GO:0003743|GO:0006413 AM393_RS01890 f5786dbfdc8bb66c68479c9ff3c428a3 1025 SUPERFAMILY SSF82693 555 650 4.45E-19 T 28-03-2018 AM393_RS01890 f5786dbfdc8bb66c68479c9ff3c428a3 1025 Gene3D G3DSA:3.30.2090.10 701 788 3.2E-17 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM393_RS01890 f5786dbfdc8bb66c68479c9ff3c428a3 1025 SUPERFAMILY SSF82693 788 834 3.14E-6 T 28-03-2018 AM393_RS01890 f5786dbfdc8bb66c68479c9ff3c428a3 1025 SUPERFAMILY SSF82693 663 701 3.14E-6 T 28-03-2018 AM393_RS01890 f5786dbfdc8bb66c68479c9ff3c428a3 1025 SUPERFAMILY SSF82693 136 182 8.11E-23 T 28-03-2018 AM393_RS01890 f5786dbfdc8bb66c68479c9ff3c428a3 1025 SUPERFAMILY SSF82693 268 324 8.11E-23 T 28-03-2018 AM393_RS01890 f5786dbfdc8bb66c68479c9ff3c428a3 1025 Gene3D G3DSA:1.20.1640.10 281 503 5.7E-48 T 28-03-2018 AM393_RS01890 f5786dbfdc8bb66c68479c9ff3c428a3 1025 Gene3D G3DSA:1.20.1640.10 801 1021 8.6E-35 T 28-03-2018 AM393_RS01890 f5786dbfdc8bb66c68479c9ff3c428a3 1025 SUPERFAMILY SSF82714 183 265 1.14E-15 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM393_RS01890 f5786dbfdc8bb66c68479c9ff3c428a3 1025 SUPERFAMILY SSF82866 811 1010 8.63E-43 T 28-03-2018 AM393_RS01890 f5786dbfdc8bb66c68479c9ff3c428a3 1025 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 3.3E-87 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS01890 f5786dbfdc8bb66c68479c9ff3c428a3 1025 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 3.3E-87 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS01890 f5786dbfdc8bb66c68479c9ff3c428a3 1025 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 3.3E-87 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS01890 f5786dbfdc8bb66c68479c9ff3c428a3 1025 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 3.3E-87 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS01890 f5786dbfdc8bb66c68479c9ff3c428a3 1025 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 3.3E-87 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS01890 f5786dbfdc8bb66c68479c9ff3c428a3 1025 PRINTS PR00702 Acriflavin resistance protein family signature 605 619 3.3E-87 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS01890 f5786dbfdc8bb66c68479c9ff3c428a3 1025 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 3.3E-87 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS01890 f5786dbfdc8bb66c68479c9ff3c428a3 1025 PRINTS PR00702 Acriflavin resistance protein family signature 542 559 3.3E-87 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS01890 f5786dbfdc8bb66c68479c9ff3c428a3 1025 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 3.3E-87 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS01890 f5786dbfdc8bb66c68479c9ff3c428a3 1025 SUPERFAMILY SSF82693 40 135 3.66E-23 T 28-03-2018 AM393_RS01890 f5786dbfdc8bb66c68479c9ff3c428a3 1025 Gene3D G3DSA:3.30.70.1430 40 142 1.3E-25 T 28-03-2018 AM393_RS01890 f5786dbfdc8bb66c68479c9ff3c428a3 1025 Pfam PF00873 AcrB/AcrD/AcrF family 4 1008 0.0 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS01890 f5786dbfdc8bb66c68479c9ff3c428a3 1025 Gene3D G3DSA:3.30.2090.10 181 269 2.7E-14 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM393_RS01890 f5786dbfdc8bb66c68479c9ff3c428a3 1025 SUPERFAMILY SSF82866 291 490 1.2E-48 T 28-03-2018 AM393_RS01890 f5786dbfdc8bb66c68479c9ff3c428a3 1025 Gene3D G3DSA:3.30.70.1430 557 652 2.7E-15 T 28-03-2018 AM393_RS01890 f5786dbfdc8bb66c68479c9ff3c428a3 1025 SUPERFAMILY SSF82714 703 785 4.19E-17 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM393_RS01890 f5786dbfdc8bb66c68479c9ff3c428a3 1025 Hamap MF_01424 Multidrug resistance protein MdtC [mdtC]. 1 1024 26.981 T 28-03-2018 IPR023931 Multidrug resistance protein MdtC AM393_RS22450 808bf00e257ad45f999c7748b5948d38 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 14 73 1.7E-16 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS22450 808bf00e257ad45f999c7748b5948d38 307 Gene3D G3DSA:1.10.10.10 3 93 4.4E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS22450 808bf00e257ad45f999c7748b5948d38 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 50 61 1.5E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS22450 808bf00e257ad45f999c7748b5948d38 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 50 1.5E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS22450 808bf00e257ad45f999c7748b5948d38 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 40 1.5E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS22450 808bf00e257ad45f999c7748b5948d38 307 SUPERFAMILY SSF53850 96 302 3.62E-34 T 28-03-2018 AM393_RS22450 808bf00e257ad45f999c7748b5948d38 307 Gene3D G3DSA:3.40.190.10 196 276 3.9E-8 T 28-03-2018 AM393_RS22450 808bf00e257ad45f999c7748b5948d38 307 Pfam PF03466 LysR substrate binding domain 101 304 4.3E-24 T 28-03-2018 IPR005119 LysR, substrate-binding AM393_RS22450 808bf00e257ad45f999c7748b5948d38 307 SUPERFAMILY SSF46785 10 89 4.46E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS22450 808bf00e257ad45f999c7748b5948d38 307 Gene3D G3DSA:3.40.190.10 96 195 2.2E-11 T 28-03-2018 AM393_RS12975 cc063d71b69b5305dcb9e7e4131fca47 282 SUPERFAMILY SSF51735 2 255 1.07E-64 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS12975 cc063d71b69b5305dcb9e7e4131fca47 282 Gene3D G3DSA:3.90.25.10 141 282 7.3E-4 T 28-03-2018 AM393_RS12975 cc063d71b69b5305dcb9e7e4131fca47 282 Pfam PF05368 NmrA-like family 2 220 3.8E-23 T 28-03-2018 IPR008030 NmrA-like domain Reactome: R-HSA-70635 AM393_RS12975 cc063d71b69b5305dcb9e7e4131fca47 282 Gene3D G3DSA:3.40.50.720 1 140 2.2E-20 T 28-03-2018 AM393_RS26455 bac6643824625f8c762ff260fb8e3672 154 Pfam PF00877 NlpC/P60 family 47 153 5.6E-30 T 28-03-2018 IPR000064 Endopeptidase, NLPC/P60 domain AM393_RS26455 bac6643824625f8c762ff260fb8e3672 154 Gene3D G3DSA:3.90.1720.10 33 154 4.9E-36 T 28-03-2018 AM393_RS26455 bac6643824625f8c762ff260fb8e3672 154 SUPERFAMILY SSF54001 33 154 1.08E-38 T 28-03-2018 AM393_RS24680 efb603934cdf16b1c1eacf7a3d62bfe0 143 SUPERFAMILY SSF82784 2 141 1.57E-39 T 28-03-2018 IPR003718 OsmC/Ohr family AM393_RS24680 efb603934cdf16b1c1eacf7a3d62bfe0 143 TIGRFAM TIGR03562 osmo_induc_OsmC: peroxiredoxin, OsmC subfamily 5 138 4.9E-58 T 28-03-2018 IPR019904 Peroxiredoxin OsmC GO:0004601|GO:0006979 KEGG: 00480+1.11.1.15 AM393_RS24680 efb603934cdf16b1c1eacf7a3d62bfe0 143 Pfam PF02566 OsmC-like protein 44 138 2.1E-19 T 28-03-2018 IPR003718 OsmC/Ohr family AM393_RS24680 efb603934cdf16b1c1eacf7a3d62bfe0 143 Gene3D G3DSA:3.30.300.20 7 143 5.3E-29 T 28-03-2018 IPR015946 K homology domain-like, alpha/beta AM393_RS03345 1e4e704b6b0dcaff39800d4bd330f607 117 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 2 115 2.2E-34 T 28-03-2018 IPR006504 Transcriptional regulator Spx/MgsR AM393_RS03345 1e4e704b6b0dcaff39800d4bd330f607 117 SUPERFAMILY SSF52833 1 114 4.13E-31 T 28-03-2018 IPR012336 Thioredoxin-like fold AM393_RS03345 1e4e704b6b0dcaff39800d4bd330f607 117 Gene3D G3DSA:3.40.30.10 1 115 3.9E-36 T 28-03-2018 AM393_RS03345 1e4e704b6b0dcaff39800d4bd330f607 117 Pfam PF03960 ArsC family 5 114 3.0E-17 T 28-03-2018 IPR006660 Arsenate reductase-like AM393_RS15735 5cc8f5cf9c9c50e5918941168f76b30f 331 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 133 308 1.5E-57 T 28-03-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AM393_RS15735 5cc8f5cf9c9c50e5918941168f76b30f 331 SUPERFAMILY SSF52283 44 160 1.59E-24 T 28-03-2018 AM393_RS15735 5cc8f5cf9c9c50e5918941168f76b30f 331 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 38 295 9.5E-18 T 28-03-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 AM393_RS15735 5cc8f5cf9c9c50e5918941168f76b30f 331 Gene3D G3DSA:3.40.50.720 9 138 1.2E-25 T 28-03-2018 AM393_RS15735 5cc8f5cf9c9c50e5918941168f76b30f 331 SUPERFAMILY SSF51735 127 309 1.68E-54 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS15735 5cc8f5cf9c9c50e5918941168f76b30f 331 Gene3D G3DSA:3.40.50.720 139 311 5.8E-53 T 28-03-2018 AM393_RS24540 d60672dccae1708bd1aafbf930094b59 251 SUPERFAMILY SSF48613 6 248 1.26E-77 T 28-03-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 AM393_RS24540 d60672dccae1708bd1aafbf930094b59 251 TIGRFAM TIGR02111 PQQ_syn_pqqC: coenzyme PQQ biosynthesis protein C 7 241 2.3E-117 T 28-03-2018 IPR011845 Coenzyme PQQ biosynthesis protein C GO:0018189|GO:0055114 MetaCyc: PWY-6420 AM393_RS24540 d60672dccae1708bd1aafbf930094b59 251 Pfam PF03070 TENA/THI-4/PQQC family 14 223 1.2E-67 T 28-03-2018 IPR004305 Thiaminase-2/PQQC AM393_RS24540 d60672dccae1708bd1aafbf930094b59 251 Gene3D G3DSA:1.20.910.10 1 251 2.4E-41 T 28-03-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 AM393_RS24540 d60672dccae1708bd1aafbf930094b59 251 Hamap MF_00654 Pyrroloquinoline-quinone synthase [pqqC]. 1 251 137.45 T 28-03-2018 IPR011845 Coenzyme PQQ biosynthesis protein C GO:0018189|GO:0055114 MetaCyc: PWY-6420 AM393_RS09800 cabb96775876d11b19ec56c11ff78f22 706 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 26 703 1.7E-291 T 28-03-2018 IPR004811 RelA/SpoT family GO:0015969 AM393_RS09800 cabb96775876d11b19ec56c11ff78f22 706 Pfam PF04607 Region found in RelA / SpoT proteins 235 344 3.8E-35 T 28-03-2018 IPR007685 RelA/SpoT GO:0015969 AM393_RS09800 cabb96775876d11b19ec56c11ff78f22 706 Pfam PF13291 ACT domain 626 703 1.8E-14 T 28-03-2018 IPR002912 ACT domain AM393_RS09800 cabb96775876d11b19ec56c11ff78f22 706 SUPERFAMILY SSF81271 376 448 2.83E-21 T 28-03-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 AM393_RS09800 cabb96775876d11b19ec56c11ff78f22 706 SMART SM00471 41 153 1.2E-11 T 28-03-2018 IPR003607 HD/PDEase domain AM393_RS09800 cabb96775876d11b19ec56c11ff78f22 706 Gene3D G3DSA:3.10.20.30 383 458 1.0E-23 T 28-03-2018 IPR012675 Beta-grasp domain AM393_RS09800 cabb96775876d11b19ec56c11ff78f22 706 SUPERFAMILY SSF55021 631 703 4.03E-5 T 28-03-2018 AM393_RS09800 cabb96775876d11b19ec56c11ff78f22 706 Gene3D G3DSA:3.30.70.260 627 705 3.5E-9 T 28-03-2018 AM393_RS09800 cabb96775876d11b19ec56c11ff78f22 706 SUPERFAMILY SSF109604 3 190 7.85E-76 T 28-03-2018 AM393_RS09800 cabb96775876d11b19ec56c11ff78f22 706 SUPERFAMILY SSF81301 180 393 9.97E-62 T 28-03-2018 AM393_RS09800 cabb96775876d11b19ec56c11ff78f22 706 Pfam PF02824 TGS domain 389 448 2.2E-21 T 28-03-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 AM393_RS09800 cabb96775876d11b19ec56c11ff78f22 706 SMART SM00954 235 345 6.6E-63 T 28-03-2018 IPR007685 RelA/SpoT GO:0015969 AM393_RS09800 cabb96775876d11b19ec56c11ff78f22 706 Pfam PF13328 HD domain 26 175 3.0E-53 T 28-03-2018 IPR003607 HD/PDEase domain AM393_RS09800 cabb96775876d11b19ec56c11ff78f22 706 Gene3D G3DSA:3.30.460.10 192 325 1.2E-39 T 28-03-2018 AM393_RS17200 1584457acabad2693120750a3e613d1d 237 Pfam PF10548 P22AR C-terminal domain 148 216 1.3E-10 T 28-03-2018 IPR018876 Bacteriophage P22, antirepressor protein, C-terminal AM393_RS17200 1584457acabad2693120750a3e613d1d 237 Pfam PF02498 BRO family, N-terminal domain 50 135 2.5E-8 T 28-03-2018 IPR003497 BRO N-terminal domain AM393_RS17200 1584457acabad2693120750a3e613d1d 237 SMART SM01040 43 139 1.8E-13 T 28-03-2018 IPR003497 BRO N-terminal domain AM393_RS05675 7e4611ff7cb3614918d516f8dc0a4398 202 SUPERFAMILY SSF56349 3 184 1.68E-42 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AM393_RS05675 7e4611ff7cb3614918d516f8dc0a4398 202 Gene3D G3DSA:1.10.443.10 2 177 5.1E-36 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM393_RS05675 7e4611ff7cb3614918d516f8dc0a4398 202 Pfam PF00589 Phage integrase family 6 176 4.9E-48 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM393_RS17740 0002ecf67e966373e6ab44bbdf379343 366 Gene3D G3DSA:3.60.15.10 75 366 2.7E-45 T 28-03-2018 IPR001279 Metallo-beta-lactamase AM393_RS17740 0002ecf67e966373e6ab44bbdf379343 366 SMART SM00849 108 314 1.6E-4 T 28-03-2018 IPR001279 Metallo-beta-lactamase AM393_RS17740 0002ecf67e966373e6ab44bbdf379343 366 PIRSF PIRSF038896 8 362 4.2E-88 T 28-03-2018 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D GO:0008270|GO:0070290 Reactome: R-HSA-2466712 AM393_RS17740 0002ecf67e966373e6ab44bbdf379343 366 Pfam PF12706 Beta-lactamase superfamily domain 120 314 2.2E-41 T 28-03-2018 IPR001279 Metallo-beta-lactamase AM393_RS17740 0002ecf67e966373e6ab44bbdf379343 366 SUPERFAMILY SSF56281 206 351 1.3E-35 T 28-03-2018 IPR001279 Metallo-beta-lactamase AM393_RS17740 0002ecf67e966373e6ab44bbdf379343 366 SUPERFAMILY SSF56281 105 179 1.3E-35 T 28-03-2018 IPR001279 Metallo-beta-lactamase AM393_RS03455 74cf550f4a58c5683aadff60fff0f295 686 SUPERFAMILY SSF56024 315 496 8.48E-58 T 28-03-2018 AM393_RS03455 74cf550f4a58c5683aadff60fff0f295 686 Pfam PF13089 Polyphosphate kinase N-terminal domain 7 109 2.2E-31 T 28-03-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 AM393_RS03455 74cf550f4a58c5683aadff60fff0f295 686 Gene3D G3DSA:3.30.1840.10 109 307 1.8E-51 T 28-03-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 AM393_RS03455 74cf550f4a58c5683aadff60fff0f295 686 Gene3D G3DSA:1.20.58.310 9 108 2.6E-34 T 28-03-2018 AM393_RS03455 74cf550f4a58c5683aadff60fff0f295 686 PIRSF PIRSF015589 1 685 4.8E-244 T 28-03-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 AM393_RS03455 74cf550f4a58c5683aadff60fff0f295 686 Pfam PF02503 Polyphosphate kinase middle domain 119 320 5.1E-42 T 28-03-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 AM393_RS03455 74cf550f4a58c5683aadff60fff0f295 686 Gene3D G3DSA:3.30.870.10 317 499 5.6E-25 T 28-03-2018 AM393_RS03455 74cf550f4a58c5683aadff60fff0f295 686 Gene3D G3DSA:3.30.870.10 500 686 3.9E-35 T 28-03-2018 AM393_RS03455 74cf550f4a58c5683aadff60fff0f295 686 Hamap MF_00347 Polyphosphate kinase [ppk]. 5 681 27.385 T 28-03-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 AM393_RS03455 74cf550f4a58c5683aadff60fff0f295 686 SUPERFAMILY SSF140356 3 105 8.24E-34 T 28-03-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 AM393_RS03455 74cf550f4a58c5683aadff60fff0f295 686 SUPERFAMILY SSF143724 107 313 1.24E-59 T 28-03-2018 AM393_RS03455 74cf550f4a58c5683aadff60fff0f295 686 SUPERFAMILY SSF56024 501 682 2.18E-70 T 28-03-2018 AM393_RS03455 74cf550f4a58c5683aadff60fff0f295 686 Pfam PF13090 Polyphosphate kinase C-terminal domain 331 676 1.6E-145 T 28-03-2018 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 AM393_RS03455 74cf550f4a58c5683aadff60fff0f295 686 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 7 677 5.9E-260 T 28-03-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 AM393_RS17875 cb0f65b8c9e73308d96c625ec075440e 490 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 251 258 - T 28-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 AM393_RS17875 cb0f65b8c9e73308d96c625ec075440e 490 Gene3D G3DSA:3.40.309.10 268 465 5.3E-67 T 28-03-2018 AM393_RS17875 cb0f65b8c9e73308d96c625ec075440e 490 SUPERFAMILY SSF53720 4 483 1.7E-171 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AM393_RS17875 cb0f65b8c9e73308d96c625ec075440e 490 Hamap MF_00804 NAD/NADP-dependent betaine aldehyde dehydrogenase [betB]. 4 490 57.763 T 28-03-2018 IPR011264 Betaine aldehyde dehydrogenase GO:0008802|GO:0019285|GO:0046872 KEGG: 00260+1.2.1.8|MetaCyc: PWY-3722|MetaCyc: PWY-7494 AM393_RS17875 cb0f65b8c9e73308d96c625ec075440e 490 Pfam PF00171 Aldehyde dehydrogenase family 17 479 2.5E-176 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AM393_RS17875 cb0f65b8c9e73308d96c625ec075440e 490 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 279 290 - T 28-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 AM393_RS17875 cb0f65b8c9e73308d96c625ec075440e 490 Gene3D G3DSA:3.40.605.10 1 267 5.3E-108 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AM393_RS17875 cb0f65b8c9e73308d96c625ec075440e 490 TIGRFAM TIGR01804 BADH: betaine-aldehyde dehydrogenase 10 477 1.7E-237 T 28-03-2018 IPR011264 Betaine aldehyde dehydrogenase GO:0008802|GO:0019285|GO:0046872 KEGG: 00260+1.2.1.8|MetaCyc: PWY-3722|MetaCyc: PWY-7494 AM393_RS12090 b8dd8463461bbe37144d7642345c5483 332 SUPERFAMILY SSF51395 13 314 5.86E-70 T 28-03-2018 AM393_RS12090 b8dd8463461bbe37144d7642345c5483 332 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 95 113 - T 28-03-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 AM393_RS12090 b8dd8463461bbe37144d7642345c5483 332 PIRSF PIRSF006621 3 327 4.1E-70 T 28-03-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AM393_RS12090 b8dd8463461bbe37144d7642345c5483 332 Pfam PF01207 Dihydrouridine synthase (Dus) 17 326 7.0E-95 T 28-03-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AM393_RS12090 b8dd8463461bbe37144d7642345c5483 332 TIGRFAM TIGR00742 yjbN: tRNA dihydrouridine synthase A 14 329 2.2E-168 T 28-03-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 AM393_RS12090 b8dd8463461bbe37144d7642345c5483 332 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 9 330 52.55 T 28-03-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 AM393_RS12090 b8dd8463461bbe37144d7642345c5483 332 Gene3D G3DSA:3.20.20.70 11 252 2.4E-40 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM393_RS17890 f14f0e5e70ec08deaf152f52e4cfea88 677 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 55 503 3.7E-182 T 28-03-2018 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 AM393_RS17890 f14f0e5e70ec08deaf152f52e4cfea88 677 ProSitePatterns PS01303 BCCT family of transporters signature. 318 327 - T 28-03-2018 IPR018093 BCCT transporter, conserved site GO:0005215|GO:0006810|GO:0016020 AM393_RS17890 f14f0e5e70ec08deaf152f52e4cfea88 677 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 17 501 1.3E-177 T 28-03-2018 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 AM393_RS22900 51084a203f73c0271c29b251a5931ec9 310 Gene3D G3DSA:3.30.54.10 268 308 3.7E-8 T 28-03-2018 AM393_RS22900 51084a203f73c0271c29b251a5931ec9 310 Gene3D G3DSA:3.30.54.10 187 246 9.2E-32 T 28-03-2018 AM393_RS22900 51084a203f73c0271c29b251a5931ec9 310 Hamap MF_00483 DNA replication terminus site-binding protein [tus]. 1 309 55.251 T 28-03-2018 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 AM393_RS22900 51084a203f73c0271c29b251a5931ec9 310 Gene3D G3DSA:3.50.14.10 7 186 9.9E-60 T 28-03-2018 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 AM393_RS22900 51084a203f73c0271c29b251a5931ec9 310 TIGRFAM TIGR02648 rep_term_tus: DNA replication terminus site-binding protein 10 307 4.9E-145 T 28-03-2018 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 AM393_RS22900 51084a203f73c0271c29b251a5931ec9 310 Pfam PF05472 DNA replication terminus site-binding protein (Ter protein) 9 306 9.3E-135 T 28-03-2018 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 AM393_RS22900 51084a203f73c0271c29b251a5931ec9 310 SUPERFAMILY SSF56596 5 307 1.28E-123 T 28-03-2018 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 AM393_RS18560 82ecf90798f108955287de25d7e074d2 225 Pfam PF00072 Response regulator receiver domain 4 112 2.0E-28 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM393_RS18560 82ecf90798f108955287de25d7e074d2 225 Gene3D G3DSA:1.10.10.10 122 225 2.3E-30 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS18560 82ecf90798f108955287de25d7e074d2 225 SMART SM00862 147 223 2.8E-22 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM393_RS18560 82ecf90798f108955287de25d7e074d2 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 223 4.5E-22 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM393_RS18560 82ecf90798f108955287de25d7e074d2 225 SMART SM00448 2 112 1.4E-38 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM393_RS18560 82ecf90798f108955287de25d7e074d2 225 Gene3D G3DSA:3.40.50.2300 1 121 7.7E-34 T 28-03-2018 AM393_RS18560 82ecf90798f108955287de25d7e074d2 225 SUPERFAMILY SSF52172 3 175 1.76E-38 T 28-03-2018 IPR011006 CheY-like superfamily AM393_RS20025 4ac26bdc5110520abc7091f4f1dce623 297 SUPERFAMILY SSF56112 4 270 3.83E-24 T 28-03-2018 IPR011009 Protein kinase-like domain AM393_RS20025 4ac26bdc5110520abc7091f4f1dce623 297 Pfam PF01636 Phosphotransferase enzyme family 64 242 5.2E-10 T 28-03-2018 IPR002575 Aminoglycoside phosphotransferase AM393_RS20025 4ac26bdc5110520abc7091f4f1dce623 297 Gene3D G3DSA:3.90.1200.10 1 275 1.0E-5 T 28-03-2018 AM393_RS00015 433bcfe94cde21554a83d23ab67455e8 297 SUPERFAMILY SSF56436 40 251 1.2E-44 T 28-03-2018 IPR016187 C-type lectin fold AM393_RS00015 433bcfe94cde21554a83d23ab67455e8 297 Gene3D G3DSA:3.90.1580.10 24 297 2.2E-46 T 28-03-2018 AM393_RS00015 433bcfe94cde21554a83d23ab67455e8 297 Pfam PF03781 Sulfatase-modifying factor enzyme 1 39 252 3.7E-35 T 28-03-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 AM393_RS12290 7a20c3766080b7c09959413d12ebeee7 859 Gene3D G3DSA:2.40.170.20 535 724 7.4E-4 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM393_RS12290 7a20c3766080b7c09959413d12ebeee7 859 Pfam PF13953 PapC C-terminal domain 776 842 7.3E-21 T 28-03-2018 IPR025949 PapC-like, C-terminal domain AM393_RS12290 7a20c3766080b7c09959413d12ebeee7 859 Pfam PF13954 PapC N-terminal domain 46 191 2.7E-39 T 28-03-2018 IPR025885 PapC, N-terminal domain GO:0005515 AM393_RS12290 7a20c3766080b7c09959413d12ebeee7 859 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 319 329 - T 28-03-2018 IPR018030 Fimbrial membrane usher, conserved site AM393_RS12290 7a20c3766080b7c09959413d12ebeee7 859 Pfam PF00577 Outer membrane usher protein 209 766 8.6E-171 T 28-03-2018 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 AM393_RS12290 7a20c3766080b7c09959413d12ebeee7 859 SUPERFAMILY SSF141729 71 183 4.58E-27 T 28-03-2018 AM393_RS23900 d14e448129b64a15a458bf6a12b17418 292 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 13 256 1.2E-78 T 28-03-2018 IPR013658 SMP-30/Gluconolactonase/LRE-like region AM393_RS23900 d14e448129b64a15a458bf6a12b17418 292 Gene3D G3DSA:2.120.10.30 1 292 7.3E-38 T 28-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like AM393_RS23900 d14e448129b64a15a458bf6a12b17418 292 SUPERFAMILY SSF63829 6 290 1.64E-64 T 28-03-2018 AM393_RS23900 d14e448129b64a15a458bf6a12b17418 292 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 196 213 6.7E-35 T 28-03-2018 IPR005511 Senescence marker protein-30 (SMP-30) AM393_RS23900 d14e448129b64a15a458bf6a12b17418 292 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 132 154 6.7E-35 T 28-03-2018 IPR005511 Senescence marker protein-30 (SMP-30) AM393_RS23900 d14e448129b64a15a458bf6a12b17418 292 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 14 31 6.7E-35 T 28-03-2018 IPR005511 Senescence marker protein-30 (SMP-30) AM393_RS23900 d14e448129b64a15a458bf6a12b17418 292 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 238 256 6.7E-35 T 28-03-2018 IPR005511 Senescence marker protein-30 (SMP-30) AM393_RS23900 d14e448129b64a15a458bf6a12b17418 292 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 155 175 6.7E-35 T 28-03-2018 IPR005511 Senescence marker protein-30 (SMP-30) AM393_RS23900 d14e448129b64a15a458bf6a12b17418 292 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 91 112 6.7E-35 T 28-03-2018 IPR005511 Senescence marker protein-30 (SMP-30) AM393_RS09580 0a3c8c5b30b74374a0acd6aa3960bdcc 83 PRINTS PR00160 Glutaredoxin signature 4 22 1.1E-17 T 28-03-2018 IPR014025 Glutaredoxin subgroup AM393_RS09580 0a3c8c5b30b74374a0acd6aa3960bdcc 83 PRINTS PR00160 Glutaredoxin signature 46 59 1.1E-17 T 28-03-2018 IPR014025 Glutaredoxin subgroup AM393_RS09580 0a3c8c5b30b74374a0acd6aa3960bdcc 83 PRINTS PR00160 Glutaredoxin signature 60 73 1.1E-17 T 28-03-2018 IPR014025 Glutaredoxin subgroup AM393_RS09580 0a3c8c5b30b74374a0acd6aa3960bdcc 83 TIGRFAM TIGR02181 GRX_bact: glutaredoxin 3 4 82 7.1E-37 T 28-03-2018 IPR011900 Glutaredoxin, GrxC GO:0045454 AM393_RS09580 0a3c8c5b30b74374a0acd6aa3960bdcc 83 SUPERFAMILY SSF52833 1 83 1.64E-28 T 28-03-2018 IPR012336 Thioredoxin-like fold AM393_RS09580 0a3c8c5b30b74374a0acd6aa3960bdcc 83 ProSitePatterns PS00195 Glutaredoxin active site. 6 22 - T 28-03-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 AM393_RS09580 0a3c8c5b30b74374a0acd6aa3960bdcc 83 Gene3D G3DSA:3.40.30.10 3 83 9.3E-27 T 28-03-2018 AM393_RS09580 0a3c8c5b30b74374a0acd6aa3960bdcc 83 Pfam PF00462 Glutaredoxin 4 63 3.4E-23 T 28-03-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 AM393_RS20160 ae7f5232507a8f957e91f4d990422664 369 SUPERFAMILY SSF54292 280 367 9.96E-21 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AM393_RS20160 ae7f5232507a8f957e91f4d990422664 369 SUPERFAMILY SSF50800 147 264 2.93E-16 T 28-03-2018 IPR011037 Pyruvate kinase-like, insert domain AM393_RS20160 ae7f5232507a8f957e91f4d990422664 369 SUPERFAMILY SSF50800 3 50 2.93E-16 T 28-03-2018 IPR011037 Pyruvate kinase-like, insert domain AM393_RS20160 ae7f5232507a8f957e91f4d990422664 369 SUPERFAMILY SSF141673 4 132 1.44E-27 T 28-03-2018 AM393_RS20160 ae7f5232507a8f957e91f4d990422664 369 Pfam PF03473 MOSC domain 139 262 4.5E-29 T 28-03-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 AM393_RS20160 ae7f5232507a8f957e91f4d990422664 369 Pfam PF03476 MOSC N-terminal beta barrel domain 1 116 1.2E-26 T 28-03-2018 IPR005303 MOSC, N-terminal beta barrel AM393_RS20160 ae7f5232507a8f957e91f4d990422664 369 Gene3D G3DSA:2.40.33.20 1 268 1.5E-52 T 28-03-2018 AM393_RS20160 ae7f5232507a8f957e91f4d990422664 369 Gene3D G3DSA:3.10.20.30 269 368 6.6E-18 T 28-03-2018 IPR012675 Beta-grasp domain AM393_RS20160 ae7f5232507a8f957e91f4d990422664 369 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 323 331 - T 28-03-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AM393_RS20160 ae7f5232507a8f957e91f4d990422664 369 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 296 362 4.4E-13 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AM393_RS19995 aa0c608e6a5b6f044385288e5647dde2 754 Pfam PF03772 Competence protein 201 465 1.1E-52 T 28-03-2018 IPR004477 ComEC/Rec2-related protein AM393_RS19995 aa0c608e6a5b6f044385288e5647dde2 754 Pfam PF00753 Metallo-beta-lactamase superfamily 505 675 4.5E-17 T 28-03-2018 IPR001279 Metallo-beta-lactamase AM393_RS19995 aa0c608e6a5b6f044385288e5647dde2 754 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 66 718 2.7E-232 T 28-03-2018 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 AM393_RS19995 aa0c608e6a5b6f044385288e5647dde2 754 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 221 404 2.3E-44 T 28-03-2018 IPR004477 ComEC/Rec2-related protein AM393_RS19995 aa0c608e6a5b6f044385288e5647dde2 754 Gene3D G3DSA:3.60.15.10 494 717 2.8E-23 T 28-03-2018 IPR001279 Metallo-beta-lactamase AM393_RS19995 aa0c608e6a5b6f044385288e5647dde2 754 SMART SM00849 508 689 3.7E-8 T 28-03-2018 IPR001279 Metallo-beta-lactamase AM393_RS19995 aa0c608e6a5b6f044385288e5647dde2 754 SUPERFAMILY SSF56281 495 741 6.94E-46 T 28-03-2018 IPR001279 Metallo-beta-lactamase AM393_RS10975 364438e2ace2b7a784cad084e2076864 444 Gene3D G3DSA:3.40.50.300 46 121 3.4E-5 T 28-03-2018 AM393_RS10975 364438e2ace2b7a784cad084e2076864 444 Gene3D G3DSA:1.10.8.10 201 231 3.6E-18 T 28-03-2018 AM393_RS10975 364438e2ace2b7a784cad084e2076864 444 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 136 2.5E-7 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AM393_RS10975 364438e2ace2b7a784cad084e2076864 444 Gene3D G3DSA:1.10.8.10 232 243 0.021 T 28-03-2018 AM393_RS10975 364438e2ace2b7a784cad084e2076864 444 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 336 406 4.5E-6 T 28-03-2018 IPR019489 Clp ATPase, C-terminal AM393_RS10975 364438e2ace2b7a784cad084e2076864 444 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 1 444 43.492 T 28-03-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 AM393_RS10975 364438e2ace2b7a784cad084e2076864 444 Pfam PF07724 AAA domain (Cdc48 subfamily) 188 330 7.3E-42 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AM393_RS10975 364438e2ace2b7a784cad084e2076864 444 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 4 444 1.2E-232 T 28-03-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 AM393_RS10975 364438e2ace2b7a784cad084e2076864 444 SUPERFAMILY SSF52540 3 442 5.14E-95 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS10975 364438e2ace2b7a784cad084e2076864 444 SMART SM01086 336 432 2.0E-23 T 28-03-2018 IPR019489 Clp ATPase, C-terminal AM393_RS10975 364438e2ace2b7a784cad084e2076864 444 SMART SM00382 49 333 4.1E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS10975 364438e2ace2b7a784cad084e2076864 444 Gene3D G3DSA:1.10.8.10 122 200 3.1E-29 T 28-03-2018 AM393_RS10975 364438e2ace2b7a784cad084e2076864 444 Gene3D G3DSA:1.10.8.60 336 432 7.2E-30 T 28-03-2018 AM393_RS01570 23961964bc95274f378f2db3d6ebeb5a 369 SUPERFAMILY SSF52283 327 364 1.79E-26 T 28-03-2018 AM393_RS01570 23961964bc95274f378f2db3d6ebeb5a 369 SUPERFAMILY SSF52283 9 167 1.79E-26 T 28-03-2018 AM393_RS01570 23961964bc95274f378f2db3d6ebeb5a 369 Gene3D G3DSA:3.40.50.1480 4 141 1.6E-21 T 28-03-2018 AM393_RS01570 23961964bc95274f378f2db3d6ebeb5a 369 Pfam PF05221 S-adenosyl-L-homocysteine hydrolase 9 127 1.4E-12 T 28-03-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 AM393_RS01570 23961964bc95274f378f2db3d6ebeb5a 369 Gene3D G3DSA:3.40.50.720 171 326 1.8E-29 T 28-03-2018 AM393_RS01570 23961964bc95274f378f2db3d6ebeb5a 369 SMART SM00996 3 368 5.5E-12 T 28-03-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 AM393_RS01570 23961964bc95274f378f2db3d6ebeb5a 369 SMART SM00997 168 326 4.8E-61 T 28-03-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 AM393_RS01570 23961964bc95274f378f2db3d6ebeb5a 369 Pfam PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 182 323 7.6E-34 T 28-03-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 AM393_RS01570 23961964bc95274f378f2db3d6ebeb5a 369 SUPERFAMILY SSF51735 168 326 2.95E-41 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS05220 dd2d6fe09154dca21f215bf030cb9efc 319 TIGRFAM TIGR00380 cobD: cobalamin biosynthesis protein CobD 8 307 1.9E-74 T 28-03-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 AM393_RS05220 dd2d6fe09154dca21f215bf030cb9efc 319 Pfam PF03186 CobD/Cbib protein 7 297 1.7E-106 T 28-03-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 AM393_RS05220 dd2d6fe09154dca21f215bf030cb9efc 319 Hamap MF_00024 Cobalamin biosynthesis protein CbiB [cbiB]. 1 318 108.953 T 28-03-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 AM393_RS00280 e8c3fd0889b92c519f075d9ab63d421b 356 Hamap MF_01201 Alanine racemase. 2 356 34.542 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM393_RS00280 e8c3fd0889b92c519f075d9ab63d421b 356 Pfam PF00842 Alanine racemase, C-terminal domain 232 354 8.1E-41 T 28-03-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM393_RS00280 e8c3fd0889b92c519f075d9ab63d421b 356 Gene3D G3DSA:2.40.37.10 202 356 8.1E-61 T 28-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AM393_RS00280 e8c3fd0889b92c519f075d9ab63d421b 356 PRINTS PR00992 Alanine racemase signature 27 43 3.4E-76 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM393_RS00280 e8c3fd0889b92c519f075d9ab63d421b 356 PRINTS PR00992 Alanine racemase signature 190 217 3.4E-76 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM393_RS00280 e8c3fd0889b92c519f075d9ab63d421b 356 PRINTS PR00992 Alanine racemase signature 286 303 3.4E-76 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM393_RS00280 e8c3fd0889b92c519f075d9ab63d421b 356 PRINTS PR00992 Alanine racemase signature 338 351 3.4E-76 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM393_RS00280 e8c3fd0889b92c519f075d9ab63d421b 356 PRINTS PR00992 Alanine racemase signature 61 79 3.4E-76 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM393_RS00280 e8c3fd0889b92c519f075d9ab63d421b 356 PRINTS PR00992 Alanine racemase signature 248 263 3.4E-76 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM393_RS00280 e8c3fd0889b92c519f075d9ab63d421b 356 PRINTS PR00992 Alanine racemase signature 121 133 3.4E-76 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM393_RS00280 e8c3fd0889b92c519f075d9ab63d421b 356 PRINTS PR00992 Alanine racemase signature 155 166 3.4E-76 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM393_RS00280 e8c3fd0889b92c519f075d9ab63d421b 356 PRINTS PR00992 Alanine racemase signature 265 280 3.4E-76 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM393_RS00280 e8c3fd0889b92c519f075d9ab63d421b 356 TIGRFAM TIGR00492 alr: alanine racemase 4 356 1.3E-131 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM393_RS00280 e8c3fd0889b92c519f075d9ab63d421b 356 Gene3D G3DSA:3.20.20.10 6 201 3.3E-41 T 28-03-2018 IPR029066 PLP-binding barrel AM393_RS00280 e8c3fd0889b92c519f075d9ab63d421b 356 SMART SM01005 232 356 4.1E-62 T 28-03-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM393_RS00280 e8c3fd0889b92c519f075d9ab63d421b 356 SUPERFAMILY SSF50621 227 354 4.88E-45 T 28-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AM393_RS00280 e8c3fd0889b92c519f075d9ab63d421b 356 SUPERFAMILY SSF51419 9 233 5.4E-67 T 28-03-2018 IPR029066 PLP-binding barrel AM393_RS00280 e8c3fd0889b92c519f075d9ab63d421b 356 Pfam PF01168 Alanine racemase, N-terminal domain 9 217 5.5E-68 T 28-03-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM393_RS00280 e8c3fd0889b92c519f075d9ab63d421b 356 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 32 42 - T 28-03-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM393_RS11780 a10f2cbaf1be7b89c7ab992aaad6dfc2 165 Hamap MF_01181 Regulator of sigma D [rsd]. 1 151 41.073 T 28-03-2018 IPR023785 Regulator of RNA polymerase sigma(70) subunit, Rsd AM393_RS11780 a10f2cbaf1be7b89c7ab992aaad6dfc2 165 Pfam PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ 1 147 1.5E-54 T 28-03-2018 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 AM393_RS11780 a10f2cbaf1be7b89c7ab992aaad6dfc2 165 PIRSF PIRSF016548 1 158 5.2E-56 T 28-03-2018 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 AM393_RS14980 577ec575451830fadcaeeaf0878c6612 474 SUPERFAMILY SSF51905 2 337 3.77E-57 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS14980 577ec575451830fadcaeeaf0878c6612 474 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 328 3.6E-62 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS14980 577ec575451830fadcaeeaf0878c6612 474 Gene3D G3DSA:3.40.50.720 165 336 3.9E-30 T 28-03-2018 AM393_RS14980 577ec575451830fadcaeeaf0878c6612 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 408 423 9.3E-70 T 28-03-2018 AM393_RS14980 577ec575451830fadcaeeaf0878c6612 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 141 150 9.3E-70 T 28-03-2018 AM393_RS14980 577ec575451830fadcaeeaf0878c6612 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 430 450 9.3E-70 T 28-03-2018 AM393_RS14980 577ec575451830fadcaeeaf0878c6612 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 177 202 9.3E-70 T 28-03-2018 AM393_RS14980 577ec575451830fadcaeeaf0878c6612 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 343 364 9.3E-70 T 28-03-2018 AM393_RS14980 577ec575451830fadcaeeaf0878c6612 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 9.3E-70 T 28-03-2018 AM393_RS14980 577ec575451830fadcaeeaf0878c6612 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 265 279 9.3E-70 T 28-03-2018 AM393_RS14980 577ec575451830fadcaeeaf0878c6612 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 308 315 9.3E-70 T 28-03-2018 AM393_RS14980 577ec575451830fadcaeeaf0878c6612 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 9.3E-70 T 28-03-2018 AM393_RS14980 577ec575451830fadcaeeaf0878c6612 474 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 7 460 9.4E-151 T 28-03-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 AM393_RS14980 577ec575451830fadcaeeaf0878c6612 474 SUPERFAMILY SSF55424 343 466 4.47E-39 T 28-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 AM393_RS14980 577ec575451830fadcaeeaf0878c6612 474 Gene3D G3DSA:3.30.390.30 337 462 1.9E-37 T 28-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 AM393_RS14980 577ec575451830fadcaeeaf0878c6612 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 264 280 4.0E-41 T 28-03-2018 AM393_RS14980 577ec575451830fadcaeeaf0878c6612 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 293 315 4.0E-41 T 28-03-2018 AM393_RS14980 577ec575451830fadcaeeaf0878c6612 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 4.0E-41 T 28-03-2018 AM393_RS14980 577ec575451830fadcaeeaf0878c6612 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 138 156 4.0E-41 T 28-03-2018 AM393_RS14980 577ec575451830fadcaeeaf0878c6612 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 177 195 4.0E-41 T 28-03-2018 AM393_RS14980 577ec575451830fadcaeeaf0878c6612 474 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 347 455 1.2E-35 T 28-03-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AM393_RS14980 577ec575451830fadcaeeaf0878c6612 474 Gene3D G3DSA:3.50.50.60 1 164 1.4E-26 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS14980 577ec575451830fadcaeeaf0878c6612 474 PIRSF PIRSF000350 1 469 2.3E-87 T 28-03-2018 AM393_RS14980 577ec575451830fadcaeeaf0878c6612 474 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 42 52 - T 28-03-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 AM393_RS09900 af893fc89158d5bf37b1ee09dee9fafa 772 SUPERFAMILY SSF51011 586 665 3.88E-20 T 28-03-2018 AM393_RS09900 af893fc89158d5bf37b1ee09dee9fafa 772 Gene3D G3DSA:2.60.40.1180 603 665 2.0E-21 T 28-03-2018 AM393_RS09900 af893fc89158d5bf37b1ee09dee9fafa 772 SUPERFAMILY SSF51445 263 603 8.66E-92 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily AM393_RS09900 af893fc89158d5bf37b1ee09dee9fafa 772 SUPERFAMILY SSF74650 1 247 1.13E-65 T 28-03-2018 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 AM393_RS09900 af893fc89158d5bf37b1ee09dee9fafa 772 Pfam PF13802 Galactose mutarotase-like 159 218 3.7E-16 T 28-03-2018 IPR025887 Glycoside hydrolase family 31, N-terminal domain AM393_RS09900 af893fc89158d5bf37b1ee09dee9fafa 772 Gene3D G3DSA:2.60.40.1180 666 771 1.1E-33 T 28-03-2018 AM393_RS09900 af893fc89158d5bf37b1ee09dee9fafa 772 Gene3D G3DSA:3.20.20.80 246 602 1.7E-109 T 28-03-2018 AM393_RS09900 af893fc89158d5bf37b1ee09dee9fafa 772 Gene3D G3DSA:2.60.40.1760 1 245 3.4E-57 T 28-03-2018 AM393_RS09900 af893fc89158d5bf37b1ee09dee9fafa 772 SUPERFAMILY SSF117125 666 772 9.15E-35 T 28-03-2018 AM393_RS09900 af893fc89158d5bf37b1ee09dee9fafa 772 Pfam PF01055 Glycosyl hydrolases family 31 240 668 4.2E-121 T 28-03-2018 IPR000322 Glycoside hydrolase family 31 GO:0004553|GO:0005975 AM393_RS25405 6bac7ceed56113439adb3415ecef346a 350 Hamap MF_00462 Electron transport complex subunit RsxD [rsxD]. 3 350 28.622 T 28-03-2018 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 AM393_RS25405 6bac7ceed56113439adb3415ecef346a 350 TIGRFAM TIGR01946 rnfD: electron transport complex, RnfABCDGE type, D subunit 8 349 1.2E-146 T 28-03-2018 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 AM393_RS25405 6bac7ceed56113439adb3415ecef346a 350 Pfam PF03116 NQR2, RnfD, RnfE family 6 348 2.3E-107 T 28-03-2018 IPR004338 NADH-quinone reductase NQR2/RnfD GO:0006810|GO:0016020 AM393_RS07810 05c2fdf2875ca12cc3c9faaf01c360d5 156 Pfam PF02863 Arginine repressor, C-terminal domain 82 148 6.7E-21 T 28-03-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 AM393_RS07810 05c2fdf2875ca12cc3c9faaf01c360d5 156 PRINTS PR01467 Bacterial arginine repressor signature 25 38 1.0E-23 T 28-03-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 AM393_RS07810 05c2fdf2875ca12cc3c9faaf01c360d5 156 PRINTS PR01467 Bacterial arginine repressor signature 121 136 1.0E-23 T 28-03-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 AM393_RS07810 05c2fdf2875ca12cc3c9faaf01c360d5 156 PRINTS PR01467 Bacterial arginine repressor signature 42 57 1.0E-23 T 28-03-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 AM393_RS07810 05c2fdf2875ca12cc3c9faaf01c360d5 156 PRINTS PR01467 Bacterial arginine repressor signature 90 103 1.0E-23 T 28-03-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 AM393_RS07810 05c2fdf2875ca12cc3c9faaf01c360d5 156 Hamap MF_00173 Arginine repressor [argR]. 1 155 59.74 T 28-03-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 AM393_RS07810 05c2fdf2875ca12cc3c9faaf01c360d5 156 Gene3D G3DSA:3.30.1360.40 76 151 2.3E-24 T 28-03-2018 IPR024946 Arginine repressor C-terminal-like domain Reactome: R-HSA-4615885 AM393_RS07810 05c2fdf2875ca12cc3c9faaf01c360d5 156 Gene3D G3DSA:1.10.10.10 5 69 3.9E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS07810 05c2fdf2875ca12cc3c9faaf01c360d5 156 SUPERFAMILY SSF55252 82 149 4.84E-18 T 28-03-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 AM393_RS07810 05c2fdf2875ca12cc3c9faaf01c360d5 156 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 89 153 3.0E-28 T 28-03-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 AM393_RS07810 05c2fdf2875ca12cc3c9faaf01c360d5 156 TIGRFAM TIGR01529 argR_whole: arginine repressor 9 151 8.8E-47 T 28-03-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 AM393_RS07810 05c2fdf2875ca12cc3c9faaf01c360d5 156 Pfam PF01316 Arginine repressor, DNA binding domain 5 74 3.3E-26 T 28-03-2018 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 AM393_RS07810 05c2fdf2875ca12cc3c9faaf01c360d5 156 SUPERFAMILY SSF46785 3 77 1.63E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS24485 2a9bd6450bdc4558f8594f52ac61d9ce 311 Gene3D G3DSA:3.40.190.10 21 134 2.8E-20 T 28-03-2018 AM393_RS24485 2a9bd6450bdc4558f8594f52ac61d9ce 311 SUPERFAMILY SSF53850 26 303 3.86E-47 T 28-03-2018 AM393_RS24485 2a9bd6450bdc4558f8594f52ac61d9ce 311 Pfam PF09084 NMT1/THI5 like 34 244 1.5E-65 T 28-03-2018 IPR015168 SsuA/THI5-like AM393_RS24485 2a9bd6450bdc4558f8594f52ac61d9ce 311 Gene3D G3DSA:3.40.190.10 135 309 1.1E-21 T 28-03-2018 AM393_RS14345 bf860eea69b0c3aa7178532176310677 820 SUPERFAMILY SSF55021 303 381 2.69E-23 T 28-03-2018 AM393_RS14345 bf860eea69b0c3aa7178532176310677 820 SUPERFAMILY SSF55347 614 798 3.86E-51 T 28-03-2018 AM393_RS14345 bf860eea69b0c3aa7178532176310677 820 Gene3D G3DSA:3.30.360.10 636 794 2.8E-52 T 28-03-2018 AM393_RS14345 bf860eea69b0c3aa7178532176310677 820 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 472 605 3.7E-31 T 28-03-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 AM393_RS14345 bf860eea69b0c3aa7178532176310677 820 SUPERFAMILY SSF53633 1 296 1.28E-72 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase AM393_RS14345 bf860eea69b0c3aa7178532176310677 820 Gene3D G3DSA:3.30.70.260 289 384 9.8E-26 T 28-03-2018 AM393_RS14345 bf860eea69b0c3aa7178532176310677 820 Gene3D G3DSA:3.30.70.260 385 464 1.1E-18 T 28-03-2018 AM393_RS14345 bf860eea69b0c3aa7178532176310677 820 SUPERFAMILY SSF51735 464 636 1.44E-38 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS14345 bf860eea69b0c3aa7178532176310677 820 Gene3D G3DSA:3.40.1160.10 1 288 2.3E-63 T 28-03-2018 AM393_RS14345 bf860eea69b0c3aa7178532176310677 820 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 3 460 8.3E-151 T 28-03-2018 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AM393_RS14345 bf860eea69b0c3aa7178532176310677 820 Pfam PF00742 Homoserine dehydrogenase 614 811 4.3E-47 T 28-03-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 AM393_RS14345 bf860eea69b0c3aa7178532176310677 820 PIRSF PIRSF000727 1 818 0.0 T 28-03-2018 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+2.7.2.4+1.1.1.3|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4+1.1.1.3|KEGG: 00300+2.7.2.4+1.1.1.3|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AM393_RS14345 bf860eea69b0c3aa7178532176310677 820 Pfam PF13840 ACT domain 394 453 1.3E-8 T 28-03-2018 IPR027795 GATS-like ACT domain AM393_RS14345 bf860eea69b0c3aa7178532176310677 820 Pfam PF01842 ACT domain 324 376 1.1E-8 T 28-03-2018 IPR002912 ACT domain AM393_RS14345 bf860eea69b0c3aa7178532176310677 820 Gene3D G3DSA:3.40.50.720 465 635 3.9E-29 T 28-03-2018 AM393_RS14345 bf860eea69b0c3aa7178532176310677 820 ProSitePatterns PS00324 Aspartokinase signature. 3 11 - T 28-03-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AM393_RS14345 bf860eea69b0c3aa7178532176310677 820 SUPERFAMILY SSF55021 383 476 6.72E-22 T 28-03-2018 AM393_RS14345 bf860eea69b0c3aa7178532176310677 820 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 660 682 - T 28-03-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 AM393_RS14345 bf860eea69b0c3aa7178532176310677 820 Pfam PF00696 Amino acid kinase family 2 284 1.7E-45 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase AM393_RS04765 3c66b910ee0d0cdaa3b1b897a21912ea 475 Hamap MF_01985 Phenolic acid decarboxylase subunit C. 1 472 70.768 T 28-03-2018 IPR032902 Phenolic acid decarboxylase subunit C GO:0016831 KEGG: 00627+4.1.1.61 AM393_RS04765 3c66b910ee0d0cdaa3b1b897a21912ea 475 SUPERFAMILY SSF50475 3 309 2.43E-82 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 AM393_RS04765 3c66b910ee0d0cdaa3b1b897a21912ea 475 SUPERFAMILY SSF143968 312 467 9.55E-41 T 28-03-2018 AM393_RS04765 3c66b910ee0d0cdaa3b1b897a21912ea 475 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 6 441 9.4E-126 T 28-03-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 AM393_RS04765 3c66b910ee0d0cdaa3b1b897a21912ea 475 Gene3D G3DSA:3.40.1670.10 311 453 1.3E-32 T 28-03-2018 AM393_RS04765 3c66b910ee0d0cdaa3b1b897a21912ea 475 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 10 416 1.4E-105 T 28-03-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 AM393_RS03440 4dbe54408ea226fc75c47a0825bcf5a3 297 Gene3D G3DSA:3.30.420.40 114 290 4.8E-45 T 28-03-2018 AM393_RS03440 4dbe54408ea226fc75c47a0825bcf5a3 297 Gene3D G3DSA:3.30.420.40 2 113 4.8E-22 T 28-03-2018 AM393_RS03440 4dbe54408ea226fc75c47a0825bcf5a3 297 SUPERFAMILY SSF53067 1 290 1.26E-52 T 28-03-2018 AM393_RS03440 4dbe54408ea226fc75c47a0825bcf5a3 297 Pfam PF00480 ROK family 5 284 7.9E-41 T 28-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 AM393_RS23895 13d7d2a0bb23ca810af8bb7fccdeb407 445 Gene3D G3DSA:1.20.1250.20 242 445 3.6E-36 T 28-03-2018 AM393_RS23895 13d7d2a0bb23ca810af8bb7fccdeb407 445 Pfam PF07690 Major Facilitator Superfamily 31 314 4.5E-28 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS23895 13d7d2a0bb23ca810af8bb7fccdeb407 445 SUPERFAMILY SSF103473 1 442 8.76E-72 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS23895 13d7d2a0bb23ca810af8bb7fccdeb407 445 Gene3D G3DSA:1.20.1250.20 14 211 1.0E-25 T 28-03-2018 AM393_RS03820 94cfd91f12314e8fbb71ebc5e348537a 245 Gene3D G3DSA:3.40.50.150 9 240 7.1E-28 T 28-03-2018 AM393_RS03820 94cfd91f12314e8fbb71ebc5e348537a 245 Pfam PF05175 Methyltransferase small domain 46 129 3.6E-13 T 28-03-2018 IPR007848 Methyltransferase small domain GO:0008168 AM393_RS03820 94cfd91f12314e8fbb71ebc5e348537a 245 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 119 125 - T 28-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AM393_RS03820 94cfd91f12314e8fbb71ebc5e348537a 245 SUPERFAMILY SSF53335 13 176 1.12E-28 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM393_RS03820 94cfd91f12314e8fbb71ebc5e348537a 245 Hamap MF_01872 tRNA1(Val) (adenine(37)-N6)-methyltransferase [yfiC]. 11 245 53.782 T 28-03-2018 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase GO:0016430 KEGG: 00340+2.1.1.22 AM393_RS01050 c02b05fa4ed5792fc04d0ef86223cc52 285 SUPERFAMILY SSF81345 12 269 1.27E-20 T 28-03-2018 IPR029022 ABC transporter, BtuC-like AM393_RS01050 c02b05fa4ed5792fc04d0ef86223cc52 285 Pfam PF00950 ABC 3 transport family 16 272 3.5E-53 T 28-03-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 AM393_RS01050 c02b05fa4ed5792fc04d0ef86223cc52 285 Gene3D G3DSA:1.10.3470.10 16 280 4.7E-19 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AM393_RS06070 32ae08cacdd60029d1ad2874242c66f7 418 Gene3D G3DSA:1.20.1250.20 17 224 7.3E-29 T 28-03-2018 AM393_RS06070 32ae08cacdd60029d1ad2874242c66f7 418 Gene3D G3DSA:1.20.1250.20 225 417 2.7E-28 T 28-03-2018 AM393_RS06070 32ae08cacdd60029d1ad2874242c66f7 418 SUPERFAMILY SSF103473 19 417 9.55E-70 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS06070 32ae08cacdd60029d1ad2874242c66f7 418 Pfam PF07690 Major Facilitator Superfamily 34 380 1.3E-43 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS20345 e4a5f2b546dc6fe4849c6ec1fe7a5f2f 361 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 244 263 - T 28-03-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 AM393_RS20345 e4a5f2b546dc6fe4849c6ec1fe7a5f2f 361 SUPERFAMILY SSF53659 2 359 1.17E-115 T 28-03-2018 AM393_RS20345 e4a5f2b546dc6fe4849c6ec1fe7a5f2f 361 SMART SM01329 6 355 1.1E-178 T 28-03-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 AM393_RS20345 e4a5f2b546dc6fe4849c6ec1fe7a5f2f 361 TIGRFAM TIGR02089 TTC: tartrate dehydrogenase 2 359 3.2E-166 T 28-03-2018 IPR011829 Tartrate dehydrogenase GO:0016616|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.93|KEGG: 00650+1.1.1.83 AM393_RS20345 e4a5f2b546dc6fe4849c6ec1fe7a5f2f 361 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 7 355 2.0E-86 T 28-03-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 AM393_RS20345 e4a5f2b546dc6fe4849c6ec1fe7a5f2f 361 Gene3D G3DSA:3.40.718.10 213 360 5.7E-54 T 28-03-2018 AM393_RS20345 e4a5f2b546dc6fe4849c6ec1fe7a5f2f 361 Gene3D G3DSA:3.40.718.10 1 212 1.5E-66 T 28-03-2018 AM393_RS14010 015d31d2f8904928cc1cf2d02a364c42 453 Gene3D G3DSA:1.20.1250.20 32 232 1.4E-39 T 28-03-2018 AM393_RS14010 015d31d2f8904928cc1cf2d02a364c42 453 PIRSF PIRSF002808 22 452 2.7E-37 T 28-03-2018 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 AM393_RS14010 015d31d2f8904928cc1cf2d02a364c42 453 Gene3D G3DSA:1.20.1250.20 247 452 2.0E-25 T 28-03-2018 AM393_RS14010 015d31d2f8904928cc1cf2d02a364c42 453 Pfam PF07690 Major Facilitator Superfamily 47 408 3.4E-57 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS14010 015d31d2f8904928cc1cf2d02a364c42 453 SUPERFAMILY SSF103473 33 446 4.19E-83 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS05940 addbf0dcdfccf125db5c6ab3c02f7fb4 364 PIRSF PIRSF006487 1 363 3.6E-76 T 28-03-2018 AM393_RS05940 addbf0dcdfccf125db5c6ab3c02f7fb4 364 Gene3D G3DSA:4.10.1250.10 232 276 2.7E-15 T 28-03-2018 AM393_RS05940 addbf0dcdfccf125db5c6ab3c02f7fb4 364 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 2 359 5.4E-157 T 28-03-2018 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 AM393_RS05940 addbf0dcdfccf125db5c6ab3c02f7fb4 364 SUPERFAMILY SSF103025 3 277 5.97E-87 T 28-03-2018 AM393_RS05940 addbf0dcdfccf125db5c6ab3c02f7fb4 364 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 263 353 1.9E-19 T 28-03-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 AM393_RS05940 addbf0dcdfccf125db5c6ab3c02f7fb4 364 Gene3D G3DSA:2.40.30.110 277 363 8.0E-20 T 28-03-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 AM393_RS05940 addbf0dcdfccf125db5c6ab3c02f7fb4 364 Hamap MF_00259 Aminomethyltransferase [gcvT]. 1 359 43.838 T 28-03-2018 IPR022903 Glycine cleavage system T protein, bacteria GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 AM393_RS05940 addbf0dcdfccf125db5c6ab3c02f7fb4 364 Gene3D G3DSA:3.30.1360.120 137 231 6.1E-23 T 28-03-2018 AM393_RS05940 addbf0dcdfccf125db5c6ab3c02f7fb4 364 Pfam PF01571 Aminomethyltransferase folate-binding domain 7 254 1.4E-79 T 28-03-2018 IPR006222 Glycine cleavage T-protein-like, N-terminal AM393_RS05940 addbf0dcdfccf125db5c6ab3c02f7fb4 364 SUPERFAMILY SSF101790 271 361 4.25E-26 T 28-03-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain AM393_RS05940 addbf0dcdfccf125db5c6ab3c02f7fb4 364 Gene3D G3DSA:3.30.1360.120 2 136 4.5E-32 T 28-03-2018 AM393_RS21165 35b386d6ca83227889893845d637c096 166 Pfam PF04073 Aminoacyl-tRNA editing domain 29 152 9.2E-25 T 28-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AM393_RS21165 35b386d6ca83227889893845d637c096 166 SUPERFAMILY SSF55826 10 162 1.27E-34 T 28-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AM393_RS21165 35b386d6ca83227889893845d637c096 166 Gene3D G3DSA:3.90.960.10 4 166 1.1E-36 T 28-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AM393_RS25480 fc63ba8242b0be3142cf6ff646264a19 78 Pfam PF07869 Protein of unknown function (DUF1656) 19 70 1.3E-12 T 28-03-2018 IPR012451 Protein of unknown function DUF1656 AM393_RS21310 fdb52390ddc9736b2bb46b22d1190b46 327 SUPERFAMILY SSF51430 1 319 1.01E-84 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM393_RS21310 fdb52390ddc9736b2bb46b22d1190b46 327 PRINTS PR00069 Aldo-keto reductase signature 120 138 1.7E-7 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM393_RS21310 fdb52390ddc9736b2bb46b22d1190b46 327 PRINTS PR00069 Aldo-keto reductase signature 154 171 1.7E-7 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM393_RS21310 fdb52390ddc9736b2bb46b22d1190b46 327 PRINTS PR00069 Aldo-keto reductase signature 188 217 1.7E-7 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM393_RS21310 fdb52390ddc9736b2bb46b22d1190b46 327 Gene3D G3DSA:3.20.20.100 1 325 6.2E-85 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM393_RS21310 fdb52390ddc9736b2bb46b22d1190b46 327 Pfam PF00248 Aldo/keto reductase family 15 319 2.1E-61 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM393_RS14005 21bcaff666d83d9bc39f882584a96974 278 Gene3D G3DSA:3.40.630.30 144 265 1.3E-6 T 28-03-2018 AM393_RS14005 21bcaff666d83d9bc39f882584a96974 278 Pfam PF00583 Acetyltransferase (GNAT) family 203 239 1.2E-4 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AM393_RS14005 21bcaff666d83d9bc39f882584a96974 278 Pfam PF00583 Acetyltransferase (GNAT) family 51 130 3.0E-13 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AM393_RS14005 21bcaff666d83d9bc39f882584a96974 278 SUPERFAMILY SSF55729 15 133 4.99E-23 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM393_RS14005 21bcaff666d83d9bc39f882584a96974 278 SUPERFAMILY SSF55729 189 256 3.84E-7 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM393_RS14005 21bcaff666d83d9bc39f882584a96974 278 Gene3D G3DSA:3.40.630.30 2 143 5.2E-22 T 28-03-2018 AM393_RS25620 cd5abeab309a8fc63d5bb7ffa1099675 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 66 2.1E-17 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS25620 cd5abeab309a8fc63d5bb7ffa1099675 294 Pfam PF03466 LysR substrate binding domain 95 290 8.4E-27 T 28-03-2018 IPR005119 LysR, substrate-binding AM393_RS25620 cd5abeab309a8fc63d5bb7ffa1099675 294 Gene3D G3DSA:3.40.190.10 177 261 9.0E-13 T 28-03-2018 AM393_RS25620 cd5abeab309a8fc63d5bb7ffa1099675 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 4.8E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS25620 cd5abeab309a8fc63d5bb7ffa1099675 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 4.8E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS25620 cd5abeab309a8fc63d5bb7ffa1099675 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 4.8E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS25620 cd5abeab309a8fc63d5bb7ffa1099675 294 SUPERFAMILY SSF46785 4 86 1.24E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS25620 cd5abeab309a8fc63d5bb7ffa1099675 294 Gene3D G3DSA:1.10.10.10 6 88 8.8E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS25620 cd5abeab309a8fc63d5bb7ffa1099675 294 SUPERFAMILY SSF53850 95 292 1.18E-27 T 28-03-2018 AM393_RS25620 cd5abeab309a8fc63d5bb7ffa1099675 294 Gene3D G3DSA:3.40.190.10 92 176 4.1E-12 T 28-03-2018 AM393_RS12140 ab120fb12b41c77472f4ca5230393838 174 Hamap MF_00984 Single-stranded DNA-binding protein. 6 117 40.523 T 28-03-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 AM393_RS12140 ab120fb12b41c77472f4ca5230393838 174 PIRSF PIRSF002070 2 157 6.9E-42 T 28-03-2018 AM393_RS12140 ab120fb12b41c77472f4ca5230393838 174 Pfam PF00436 Single-strand binding protein family 6 112 2.1E-43 T 28-03-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 AM393_RS12140 ab120fb12b41c77472f4ca5230393838 174 Gene3D G3DSA:2.40.50.140 1 118 1.7E-47 T 28-03-2018 AM393_RS12140 ab120fb12b41c77472f4ca5230393838 174 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 3 174 4.2E-64 T 28-03-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 AM393_RS12140 ab120fb12b41c77472f4ca5230393838 174 SUPERFAMILY SSF50249 4 174 8.23E-64 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM393_RS26175 8d68cbb4fe587aafc19b044ba7b82f43 241 SUPERFAMILY SSF64438 22 224 5.13E-47 T 28-03-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic AM393_RS26175 8d68cbb4fe587aafc19b044ba7b82f43 241 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 31 224 1.9E-41 T 28-03-2018 IPR003730 Multi-copper polyphenol oxidoreductase AM393_RS26175 8d68cbb4fe587aafc19b044ba7b82f43 241 Gene3D G3DSA:3.60.140.10 16 241 2.7E-54 T 28-03-2018 AM393_RS26670 25aeb66ce5e6c36fdcb9f2cd73c35861 280 SUPERFAMILY SSF53328 86 279 1.83E-60 T 28-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AM393_RS26670 25aeb66ce5e6c36fdcb9f2cd73c35861 280 Gene3D G3DSA:3.40.50.170 85 280 3.5E-52 T 28-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AM393_RS26670 25aeb66ce5e6c36fdcb9f2cd73c35861 280 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 4 280 46.271 T 28-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AM393_RS26670 25aeb66ce5e6c36fdcb9f2cd73c35861 280 PIRSF PIRSF036480 4 280 1.5E-113 T 28-03-2018 AM393_RS26670 25aeb66ce5e6c36fdcb9f2cd73c35861 280 Pfam PF01842 ACT domain 8 69 5.4E-8 T 28-03-2018 IPR002912 ACT domain AM393_RS26670 25aeb66ce5e6c36fdcb9f2cd73c35861 280 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 41 53 5.4E-70 T 28-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AM393_RS26670 25aeb66ce5e6c36fdcb9f2cd73c35861 280 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 108 135 5.4E-70 T 28-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AM393_RS26670 25aeb66ce5e6c36fdcb9f2cd73c35861 280 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 9 35 5.4E-70 T 28-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AM393_RS26670 25aeb66ce5e6c36fdcb9f2cd73c35861 280 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 86 108 5.4E-70 T 28-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AM393_RS26670 25aeb66ce5e6c36fdcb9f2cd73c35861 280 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 254 279 5.4E-70 T 28-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AM393_RS26670 25aeb66ce5e6c36fdcb9f2cd73c35861 280 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 232 254 5.4E-70 T 28-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AM393_RS26670 25aeb66ce5e6c36fdcb9f2cd73c35861 280 Pfam PF00551 Formyl transferase 86 262 1.7E-54 T 28-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AM393_RS26670 25aeb66ce5e6c36fdcb9f2cd73c35861 280 SUPERFAMILY SSF55021 6 56 4.58E-9 T 28-03-2018 AM393_RS26670 25aeb66ce5e6c36fdcb9f2cd73c35861 280 Gene3D G3DSA:3.30.70.260 3 84 4.0E-12 T 28-03-2018 AM393_RS26670 25aeb66ce5e6c36fdcb9f2cd73c35861 280 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 8 280 2.2E-130 T 28-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AM393_RS01475 b170fb880769da1dd430c63595bc8046 484 Pfam PF01048 Phosphorylase superfamily 266 431 1.2E-19 T 28-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AM393_RS01475 b170fb880769da1dd430c63595bc8046 484 Pfam PF10423 Bacterial AMP nucleoside phosphorylase N-terminus 12 167 1.7E-51 T 28-03-2018 IPR018953 AMP nucleoside phosphorylase, N-terminal KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 AM393_RS01475 b170fb880769da1dd430c63595bc8046 484 TIGRFAM TIGR01717 AMP-nucleosdse: AMP nucleosidase 10 484 1.0E-238 T 28-03-2018 IPR011271 AMP nucleosidase GO:0008714|GO:0009116|GO:0044209 KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 AM393_RS01475 b170fb880769da1dd430c63595bc8046 484 Gene3D G3DSA:3.40.50.1580 174 467 1.9E-70 T 28-03-2018 AM393_RS01475 b170fb880769da1dd430c63595bc8046 484 SUPERFAMILY SSF53167 9 484 2.36E-158 T 28-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AM393_RS01475 b170fb880769da1dd430c63595bc8046 484 Hamap MF_01932 AMP nucleosidase [amn]. 3 484 58.363 T 28-03-2018 IPR011271 AMP nucleosidase GO:0008714|GO:0009116|GO:0044209 KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 AM393_RS01475 b170fb880769da1dd430c63595bc8046 484 Gene3D G3DSA:3.30.1730.10 6 170 7.5E-50 T 28-03-2018 IPR018953 AMP nucleoside phosphorylase, N-terminal KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 AM393_RS21370 2be092f25b9801c03fa16b89af05a965 326 Gene3D G3DSA:3.40.50.720 133 308 4.1E-40 T 28-03-2018 AM393_RS21370 2be092f25b9801c03fa16b89af05a965 326 Gene3D G3DSA:3.90.180.10 1 132 9.2E-43 T 28-03-2018 AM393_RS21370 2be092f25b9801c03fa16b89af05a965 326 SUPERFAMILY SSF50129 2 140 3.3E-41 T 28-03-2018 IPR011032 GroES-like AM393_RS21370 2be092f25b9801c03fa16b89af05a965 326 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 98 6.8E-10 T 28-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AM393_RS21370 2be092f25b9801c03fa16b89af05a965 326 SUPERFAMILY SSF51735 111 286 7.55E-47 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS21370 2be092f25b9801c03fa16b89af05a965 326 TIGRFAM TIGR02824 quinone_pig3: putative NAD(P)H quinone oxidoreductase, PIG3 family 2 324 1.9E-141 T 28-03-2018 IPR014189 Quinone oxidoreductase PIG3 Reactome: R-HSA-6803205 AM393_RS21370 2be092f25b9801c03fa16b89af05a965 326 Pfam PF00107 Zinc-binding dehydrogenase 151 270 8.7E-25 T 28-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AM393_RS21370 2be092f25b9801c03fa16b89af05a965 326 SMART SM00829 10 322 1.7E-63 T 28-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AM393_RS18170 12b1dace0ef41bf4d06683a94a30b043 329 Gene3D G3DSA:1.10.3470.10 20 323 7.1E-25 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AM393_RS18170 12b1dace0ef41bf4d06683a94a30b043 329 Pfam PF02653 Branched-chain amino acid transport system / permease component 48 317 4.1E-27 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AM393_RS11960 18ace124e79e011bef8a41c80673e340 449 SUPERFAMILY SSF55021 297 393 5.66E-17 T 28-03-2018 AM393_RS11960 18ace124e79e011bef8a41c80673e340 449 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 3 449 2.2E-133 T 28-03-2018 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AM393_RS11960 18ace124e79e011bef8a41c80673e340 449 ProSitePatterns PS00324 Aspartokinase signature. 6 14 - T 28-03-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AM393_RS11960 18ace124e79e011bef8a41c80673e340 449 Gene3D G3DSA:3.40.1160.10 1 283 1.1E-61 T 28-03-2018 AM393_RS11960 18ace124e79e011bef8a41c80673e340 449 Gene3D G3DSA:3.30.70.260 370 449 2.1E-15 T 28-03-2018 AM393_RS11960 18ace124e79e011bef8a41c80673e340 449 Gene3D G3DSA:3.30.70.260 284 369 6.0E-20 T 28-03-2018 AM393_RS11960 18ace124e79e011bef8a41c80673e340 449 Pfam PF00696 Amino acid kinase family 4 277 2.9E-47 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase AM393_RS11960 18ace124e79e011bef8a41c80673e340 449 SUPERFAMILY SSF53633 4 291 1.44E-74 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase AM393_RS11960 18ace124e79e011bef8a41c80673e340 449 PIRSF PIRSF000726 2 449 1.1E-156 T 28-03-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AM393_RS11960 18ace124e79e011bef8a41c80673e340 449 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 3 449 5.1E-145 T 28-03-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AM393_RS11960 18ace124e79e011bef8a41c80673e340 449 SUPERFAMILY SSF55021 377 448 3.44E-14 T 28-03-2018 AM393_RS03545 37023f5c4f38b9ebda985aefd2f3f282 331 Pfam PF13413 Helix-turn-helix domain 18 79 1.6E-14 T 28-03-2018 AM393_RS03545 37023f5c4f38b9ebda985aefd2f3f282 331 Hamap MF_02017 Cytoskeleton protein RodZ [rodZ]. 1 326 44.016 T 28-03-2018 IPR023690 Cytoskeleton protein RodZ GO:0008360|GO:0016021 AM393_RS03545 37023f5c4f38b9ebda985aefd2f3f282 331 SUPERFAMILY SSF47413 14 80 5.63E-9 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM393_RS03545 37023f5c4f38b9ebda985aefd2f3f282 331 Gene3D G3DSA:1.10.260.40 2 96 1.6E-14 T 28-03-2018 AM393_RS03545 37023f5c4f38b9ebda985aefd2f3f282 331 SMART SM00530 18 79 6.8E-6 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM393_RS03545 37023f5c4f38b9ebda985aefd2f3f282 331 Pfam PF13464 Domain of unknown function (DUF4115) 249 323 3.7E-23 T 28-03-2018 IPR025194 Domain of unknown function DUF4115 AM393_RS14465 50d3dcccfa2180a6d57e624178398bb2 304 SUPERFAMILY SSF53590 3 299 1.23E-93 T 28-03-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain AM393_RS14465 50d3dcccfa2180a6d57e624178398bb2 304 Hamap MF_01432 Non-specific ribonucleoside hydrolase RihC [rihC]. 1 304 68.841 T 28-03-2018 IPR022976 Non-specific ribonucleoside hydrolase RihC GO:0016798 AM393_RS14465 50d3dcccfa2180a6d57e624178398bb2 304 Gene3D G3DSA:3.90.245.10 1 303 3.1E-98 T 28-03-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain AM393_RS14465 50d3dcccfa2180a6d57e624178398bb2 304 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 4 293 1.1E-82 T 28-03-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain AM393_RS16840 d1aeb0da99f16e964fc9cad1209c62f9 284 Pfam PF00085 Thioredoxin 6 108 4.2E-20 T 28-03-2018 IPR013766 Thioredoxin domain GO:0045454 AM393_RS16840 d1aeb0da99f16e964fc9cad1209c62f9 284 SUPERFAMILY SSF48452 119 242 3.52E-9 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM393_RS16840 d1aeb0da99f16e964fc9cad1209c62f9 284 Pfam PF14561 Tetratricopeptide repeat 195 284 6.8E-29 T 28-03-2018 AM393_RS16840 d1aeb0da99f16e964fc9cad1209c62f9 284 Gene3D G3DSA:3.40.30.10 1 124 6.0E-31 T 28-03-2018 AM393_RS16840 d1aeb0da99f16e964fc9cad1209c62f9 284 Gene3D G3DSA:1.25.40.10 125 196 2.2E-9 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM393_RS16840 d1aeb0da99f16e964fc9cad1209c62f9 284 Pfam PF14559 Tetratricopeptide repeat 124 190 1.2E-18 T 28-03-2018 AM393_RS16840 d1aeb0da99f16e964fc9cad1209c62f9 284 Gene3D G3DSA:1.25.40.10 197 284 2.1E-6 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM393_RS16840 d1aeb0da99f16e964fc9cad1209c62f9 284 SUPERFAMILY SSF52833 2 112 1.6E-31 T 28-03-2018 IPR012336 Thioredoxin-like fold AM393_RS16715 20070e6562274e712de66e49d30139b6 1115 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 953 987 - T 28-03-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 AM393_RS16715 20070e6562274e712de66e49d30139b6 1115 SUPERFAMILY SSF50182 924 989 1.01E-16 T 28-03-2018 IPR010920 LSM domain AM393_RS16715 20070e6562274e712de66e49d30139b6 1115 Gene3D G3DSA:3.30.70.100 991 1085 1.7E-20 T 28-03-2018 AM393_RS16715 20070e6562274e712de66e49d30139b6 1115 Gene3D G3DSA:2.30.30.60 940 990 5.7E-13 T 28-03-2018 AM393_RS16715 20070e6562274e712de66e49d30139b6 1115 Gene3D G3DSA:3.40.50.300 17 789 7.5E-4 T 28-03-2018 AM393_RS16715 20070e6562274e712de66e49d30139b6 1115 Pfam PF12794 Mechanosensitive ion channel inner membrane domain 1 503 820 1.0E-93 T 28-03-2018 IPR025692 Mechanosensitive ion channel inner membrane domain 1 AM393_RS16715 20070e6562274e712de66e49d30139b6 1115 Pfam PF12795 Mechanosensitive ion channel porin domain 44 283 4.0E-66 T 28-03-2018 IPR024393 Mechanosensitive ion channel MscS, porin domain AM393_RS16715 20070e6562274e712de66e49d30139b6 1115 Pfam PF00924 Mechanosensitive ion channel 881 1080 1.3E-58 T 28-03-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AM393_RS16715 20070e6562274e712de66e49d30139b6 1115 SUPERFAMILY SSF82861 839 922 5.89E-9 T 28-03-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 AM393_RS16715 20070e6562274e712de66e49d30139b6 1115 SUPERFAMILY SSF82689 991 1091 1.7E-26 T 28-03-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 AM393_RS08660 bb8329049967df12b3e4d14fadc60b01 257 Hamap MF_01260 Pimeloyl-[acyl-carrier protein] methyl ester esterase [bioH]. 4 254 47.337 T 28-03-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 AM393_RS08660 bb8329049967df12b3e4d14fadc60b01 257 SUPERFAMILY SSF53474 4 254 1.69E-46 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AM393_RS08660 bb8329049967df12b3e4d14fadc60b01 257 TIGRFAM TIGR01738 bioH: pimelyl-[acyl-carrier protein] methyl ester esterase 10 252 1.8E-110 T 28-03-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 AM393_RS08660 bb8329049967df12b3e4d14fadc60b01 257 Pfam PF00561 alpha/beta hydrolase fold 15 241 6.0E-26 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM393_RS08660 bb8329049967df12b3e4d14fadc60b01 257 Gene3D G3DSA:3.40.50.1820 2 252 1.4E-50 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AM393_RS05280 c5e4da5c866587ad0586c94bc3d01643 148 SMART SM00877 3 80 2.3E-24 T 28-03-2018 IPR000249 Microcompartment protein, bacteria AM393_RS05280 c5e4da5c866587ad0586c94bc3d01643 148 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 3 66 1.0E-13 T 28-03-2018 AM393_RS05280 c5e4da5c866587ad0586c94bc3d01643 148 Pfam PF00936 BMC domain 4 80 1.1E-20 T 28-03-2018 IPR000249 Microcompartment protein, bacteria AM393_RS05280 c5e4da5c866587ad0586c94bc3d01643 148 SUPERFAMILY SSF143414 3 89 1.96E-22 T 28-03-2018 AM393_RS15320 a11e9c0f044231728a6c922d0ae9d725 283 Pfam PF00889 Elongation factor TS 71 263 1.5E-65 T 28-03-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AM393_RS15320 a11e9c0f044231728a6c922d0ae9d725 283 SUPERFAMILY SSF54713 142 281 4.77E-53 T 28-03-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AM393_RS15320 a11e9c0f044231728a6c922d0ae9d725 283 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 282 7.2E-121 T 28-03-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AM393_RS15320 a11e9c0f044231728a6c922d0ae9d725 283 SUPERFAMILY SSF46934 4 54 2.24E-18 T 28-03-2018 IPR009060 UBA-like GO:0005515 AM393_RS15320 a11e9c0f044231728a6c922d0ae9d725 283 SUPERFAMILY SSF54713 56 139 2.62E-20 T 28-03-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AM393_RS15320 a11e9c0f044231728a6c922d0ae9d725 283 Gene3D G3DSA:1.10.8.10 1 56 1.0E-23 T 28-03-2018 AM393_RS15320 a11e9c0f044231728a6c922d0ae9d725 283 Hamap MF_00050 Elongation factor Ts [tsf]. 1 280 79.238 T 28-03-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AM393_RS15320 a11e9c0f044231728a6c922d0ae9d725 283 ProSitePatterns PS01126 Elongation factor Ts signature 1. 12 27 - T 28-03-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AM393_RS15320 a11e9c0f044231728a6c922d0ae9d725 283 ProSitePatterns PS01127 Elongation factor Ts signature 2. 75 85 - T 28-03-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AM393_RS15320 a11e9c0f044231728a6c922d0ae9d725 283 Gene3D G3DSA:3.30.479.20 58 148 8.0E-15 T 28-03-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AM393_RS15320 a11e9c0f044231728a6c922d0ae9d725 283 Gene3D G3DSA:3.30.479.20 149 279 6.0E-48 T 28-03-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AM393_RS20205 c0f2da7b0f1934dbda6a976c86c84e7b 585 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 492 510 6.1E-10 T 28-03-2018 AM393_RS20205 c0f2da7b0f1934dbda6a976c86c84e7b 585 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 432 451 6.1E-10 T 28-03-2018 AM393_RS20205 c0f2da7b0f1934dbda6a976c86c84e7b 585 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 462 481 6.1E-10 T 28-03-2018 AM393_RS20205 c0f2da7b0f1934dbda6a976c86c84e7b 585 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 435 520 4.4E-10 T 28-03-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 AM393_RS20205 c0f2da7b0f1934dbda6a976c86c84e7b 585 Pfam PF13654 AAA domain 113 314 1.3E-22 T 28-03-2018 AM393_RS20205 c0f2da7b0f1934dbda6a976c86c84e7b 585 SUPERFAMILY SSF54211 349 540 4.93E-32 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM393_RS20205 c0f2da7b0f1934dbda6a976c86c84e7b 585 Gene3D G3DSA:3.30.230.10 326 567 2.8E-30 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AM393_RS14260 fd8a12a9e82fde095627cde59f335622 410 Gene3D G3DSA:3.40.50.300 231 399 5.1E-15 T 28-03-2018 AM393_RS14260 fd8a12a9e82fde095627cde59f335622 410 SUPERFAMILY SSF47413 6 60 2.28E-9 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM393_RS14260 fd8a12a9e82fde095627cde59f335622 410 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 66 136 1.9E-18 T 28-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AM393_RS14260 fd8a12a9e82fde095627cde59f335622 410 Pfam PF13521 AAA domain 234 394 2.1E-29 T 28-03-2018 AM393_RS14260 fd8a12a9e82fde095627cde59f335622 410 SUPERFAMILY SSF52540 232 386 4.86E-26 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS14260 fd8a12a9e82fde095627cde59f335622 410 PIRSF PIRSF004776 2 410 7.8E-211 T 28-03-2018 IPR016429 Bifunctional transcriptional regulator NadR GO:0045892 KEGG: 00760+2.7.7.1+2.7.1.22 AM393_RS14260 fd8a12a9e82fde095627cde59f335622 410 TIGRFAM TIGR01526 nadR_NMN_Atrans: nicotinamide-nucleotide adenylyltransferase 64 395 6.8E-156 T 28-03-2018 IPR006417 Nicotinamide-nucleotide adenylyltransferase GO:0003677|GO:0006355|GO:0006810|GO:0019363 KEGG: 00760+2.7.7.1+2.7.1.22 AM393_RS14260 fd8a12a9e82fde095627cde59f335622 410 SUPERFAMILY SSF52374 66 229 3.75E-18 T 28-03-2018 AM393_RS14260 fd8a12a9e82fde095627cde59f335622 410 Gene3D G3DSA:1.10.260.40 5 60 1.3E-10 T 28-03-2018 AM393_RS14260 fd8a12a9e82fde095627cde59f335622 410 Pfam PF01381 Helix-turn-helix 7 58 3.4E-9 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM393_RS14260 fd8a12a9e82fde095627cde59f335622 410 Gene3D G3DSA:3.40.50.620 63 230 5.6E-18 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM393_RS14260 fd8a12a9e82fde095627cde59f335622 410 SMART SM00530 6 62 8.9E-9 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM393_RS19145 eef14e46223dfe7d123ac8b4bc8b1e7e 249 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 186 0.0027 T 28-03-2018 AM393_RS19145 eef14e46223dfe7d123ac8b4bc8b1e7e 249 SUPERFAMILY SSF51735 4 248 3.18E-80 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS19145 eef14e46223dfe7d123ac8b4bc8b1e7e 249 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM393_RS19145 eef14e46223dfe7d123ac8b4bc8b1e7e 249 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 246 6.9E-67 T 28-03-2018 AM393_RS19145 eef14e46223dfe7d123ac8b4bc8b1e7e 249 Gene3D G3DSA:3.40.50.720 1 50 2.1E-9 T 28-03-2018 AM393_RS19145 eef14e46223dfe7d123ac8b4bc8b1e7e 249 Gene3D G3DSA:3.40.50.720 51 249 2.1E-59 T 28-03-2018 AM393_RS19145 eef14e46223dfe7d123ac8b4bc8b1e7e 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 1.7E-13 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS19145 eef14e46223dfe7d123ac8b4bc8b1e7e 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 1.7E-13 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS19145 eef14e46223dfe7d123ac8b4bc8b1e7e 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 1.7E-13 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS19145 eef14e46223dfe7d123ac8b4bc8b1e7e 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 5.7E-40 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS19145 eef14e46223dfe7d123ac8b4bc8b1e7e 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 5.7E-40 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS19145 eef14e46223dfe7d123ac8b4bc8b1e7e 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 5.7E-40 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS19145 eef14e46223dfe7d123ac8b4bc8b1e7e 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 5.7E-40 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS19145 eef14e46223dfe7d123ac8b4bc8b1e7e 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 5.7E-40 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS19145 eef14e46223dfe7d123ac8b4bc8b1e7e 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 230 5.7E-40 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS05535 63a979b4bb36f090fcdf9ca8c9ce67d1 447 Gene3D G3DSA:1.20.5.340 24 105 0.0015 T 28-03-2018 AM393_RS05535 63a979b4bb36f090fcdf9ca8c9ce67d1 447 Pfam PF11471 Maltoporin periplasmic N-terminal extension 13 52 5.4E-11 T 28-03-2018 IPR021570 LamB-type porin N-terminal domain AM393_RS05535 63a979b4bb36f090fcdf9ca8c9ce67d1 447 Pfam PF16966 Porin-like glycoporin RafY 83 447 4.9E-191 T 28-03-2018 IPR016963 Glycoporin RafY AM393_RS04590 77545f78cdcce7baa1dbb19b02bba3c0 290 Gene3D G3DSA:3.40.50.300 104 244 7.3E-22 T 28-03-2018 AM393_RS04590 77545f78cdcce7baa1dbb19b02bba3c0 290 TIGRFAM TIGR00073 hypB: hydrogenase accessory protein HypB 76 289 3.7E-96 T 28-03-2018 IPR004392 Hydrogenase accessory protein HypB GO:0006461|GO:0016151 AM393_RS04590 77545f78cdcce7baa1dbb19b02bba3c0 290 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 106 267 1.2E-34 T 28-03-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain AM393_RS04590 77545f78cdcce7baa1dbb19b02bba3c0 290 Gene3D G3DSA:3.40.50.300 245 288 5.2E-4 T 28-03-2018 AM393_RS04590 77545f78cdcce7baa1dbb19b02bba3c0 290 PIRSF PIRSF005624 70 290 1.4E-92 T 28-03-2018 IPR012202 [NiFe]-hydrogenase/urease maturation factor, Ni2-binding GTPase GO:0003924|GO:0016151 AM393_RS04590 77545f78cdcce7baa1dbb19b02bba3c0 290 SUPERFAMILY SSF52540 93 286 8.42E-33 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS15180 fbb754ec6df112cb5a5442999d7c7e33 140 PRINTS PR00813 Bacterial general secretion pathway protein G signature 6 31 7.1E-22 T 28-03-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 AM393_RS15180 fbb754ec6df112cb5a5442999d7c7e33 140 PRINTS PR00813 Bacterial general secretion pathway protein G signature 42 60 7.1E-22 T 28-03-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 AM393_RS15180 fbb754ec6df112cb5a5442999d7c7e33 140 Gene3D G3DSA:3.30.700.10 20 135 8.9E-32 T 28-03-2018 AM393_RS15180 fbb754ec6df112cb5a5442999d7c7e33 140 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 5 135 1.3E-56 T 28-03-2018 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 AM393_RS15180 fbb754ec6df112cb5a5442999d7c7e33 140 Pfam PF08334 Type II secretion system (T2SS), protein G 29 135 4.5E-37 T 28-03-2018 IPR013545 Type II secretion system protein G AM393_RS15180 fbb754ec6df112cb5a5442999d7c7e33 140 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site AM393_RS15180 fbb754ec6df112cb5a5442999d7c7e33 140 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 26 6.7E-10 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site AM393_RS15180 fbb754ec6df112cb5a5442999d7c7e33 140 SUPERFAMILY SSF54523 32 136 9.42E-38 T 28-03-2018 AM393_RS15180 fbb754ec6df112cb5a5442999d7c7e33 140 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 26 1.4E-9 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site AM393_RS04995 30f77254c3cb7d63477a0fd103822604 473 Gene3D G3DSA:1.20.1250.20 30 239 1.8E-27 T 28-03-2018 AM393_RS04995 30f77254c3cb7d63477a0fd103822604 473 Pfam PF00083 Sugar (and other) transporter 63 457 2.0E-34 T 28-03-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 AM393_RS04995 30f77254c3cb7d63477a0fd103822604 473 SUPERFAMILY SSF103473 33 466 1.03E-56 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS04995 30f77254c3cb7d63477a0fd103822604 473 Gene3D G3DSA:1.20.1250.20 258 473 6.4E-17 T 28-03-2018 AM393_RS06315 1fc68fbc3a3d1553ff63477a66412509 297 Pfam PF12835 Integrase 104 251 1.0E-60 T 28-03-2018 IPR024456 Integrase catalytic domain, putative AM393_RS06315 1fc68fbc3a3d1553ff63477a66412509 297 Gene3D G3DSA:1.10.443.10 111 295 2.4E-12 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM393_RS06315 1fc68fbc3a3d1553ff63477a66412509 297 Gene3D G3DSA:1.10.150.130 6 101 2.6E-6 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal AM393_RS06315 1fc68fbc3a3d1553ff63477a66412509 297 SUPERFAMILY SSF56349 41 280 1.0E-16 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AM393_RS06315 1fc68fbc3a3d1553ff63477a66412509 297 Pfam PF12834 Phage integrase, N-terminal 1 91 1.3E-37 T 28-03-2018 IPR024457 Putative integrase, N-terminal AM393_RS23105 a1c1132eaeaa7f69c9eecd3f262db0ff 551 Hamap MF_00212 Probable malate:quinone oxidoreductase [mqo]. 28 517 51.558 T 28-03-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 AM393_RS23105 a1c1132eaeaa7f69c9eecd3f262db0ff 551 Gene3D G3DSA:3.50.50.60 24 442 4.8E-18 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS23105 a1c1132eaeaa7f69c9eecd3f262db0ff 551 SUPERFAMILY SSF51905 189 356 2.16E-20 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS23105 a1c1132eaeaa7f69c9eecd3f262db0ff 551 SUPERFAMILY SSF51905 25 155 2.16E-20 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS23105 a1c1132eaeaa7f69c9eecd3f262db0ff 551 TIGRFAM TIGR01320 mal_quin_oxido: malate dehydrogenase (acceptor) 32 515 1.8E-200 T 28-03-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 AM393_RS23105 a1c1132eaeaa7f69c9eecd3f262db0ff 551 Pfam PF06039 Malate:quinone oxidoreductase (Mqo) 31 517 3.7E-228 T 28-03-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 AM393_RS12645 d571751c5f894d2ebda56926c35e6946 847 SUPERFAMILY SSF141729 62 179 8.63E-29 T 28-03-2018 AM393_RS12645 d571751c5f894d2ebda56926c35e6946 847 Pfam PF13953 PapC C-terminal domain 765 831 2.8E-20 T 28-03-2018 IPR025949 PapC-like, C-terminal domain AM393_RS12645 d571751c5f894d2ebda56926c35e6946 847 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 312 322 - T 28-03-2018 IPR018030 Fimbrial membrane usher, conserved site AM393_RS12645 d571751c5f894d2ebda56926c35e6946 847 Pfam PF00577 Outer membrane usher protein 201 754 2.5E-179 T 28-03-2018 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 AM393_RS12645 d571751c5f894d2ebda56926c35e6946 847 Pfam PF13954 PapC N-terminal domain 36 188 4.6E-42 T 28-03-2018 IPR025885 PapC, N-terminal domain GO:0005515 AM393_RS24705 c100c841c83d1d171b53075fcd9d53ba 331 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 2 183 3.8E-4 T 28-03-2018 AM393_RS24705 c100c841c83d1d171b53075fcd9d53ba 331 Gene3D G3DSA:3.40.50.720 3 247 9.4E-45 T 28-03-2018 AM393_RS24705 c100c841c83d1d171b53075fcd9d53ba 331 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 137 165 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM393_RS24705 c100c841c83d1d171b53075fcd9d53ba 331 Pfam PF00106 short chain dehydrogenase 3 189 4.6E-40 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS24705 c100c841c83d1d171b53075fcd9d53ba 331 SUPERFAMILY SSF51735 3 255 4.24E-55 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS24705 c100c841c83d1d171b53075fcd9d53ba 331 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 5.5E-14 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS24705 c100c841c83d1d171b53075fcd9d53ba 331 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 5.5E-14 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS24705 c100c841c83d1d171b53075fcd9d53ba 331 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 5.5E-14 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS24705 c100c841c83d1d171b53075fcd9d53ba 331 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 5.5E-14 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS24705 c100c841c83d1d171b53075fcd9d53ba 331 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 7.9E-6 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS24705 c100c841c83d1d171b53075fcd9d53ba 331 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 169 7.9E-6 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS24705 c100c841c83d1d171b53075fcd9d53ba 331 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 7.9E-6 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS25325 0c853c3ff3b7f551f7041c4d85a5aeb9 372 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 2 369 2.6E-223 T 28-03-2018 IPR014183 Alcohol dehydrogenase class III GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00620+1.1.1.28|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00680+1.1.1.284|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6454|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-6901|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396|MetaCyc: PWY-7798|Reactome: R-HSA-71384 AM393_RS25325 0c853c3ff3b7f551f7041c4d85a5aeb9 372 SUPERFAMILY SSF50129 318 369 2.21E-12 T 28-03-2018 IPR011032 GroES-like AM393_RS25325 0c853c3ff3b7f551f7041c4d85a5aeb9 372 SMART SM00829 12 367 0.002 T 28-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AM393_RS25325 0c853c3ff3b7f551f7041c4d85a5aeb9 372 Gene3D G3DSA:3.90.180.10 1 188 2.3E-60 T 28-03-2018 AM393_RS25325 0c853c3ff3b7f551f7041c4d85a5aeb9 372 Gene3D G3DSA:3.40.50.720 189 312 4.1E-25 T 28-03-2018 AM393_RS25325 0c853c3ff3b7f551f7041c4d85a5aeb9 372 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 61 75 - T 28-03-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 AM393_RS25325 0c853c3ff3b7f551f7041c4d85a5aeb9 372 SUPERFAMILY SSF50129 1 189 7.0E-73 T 28-03-2018 IPR011032 GroES-like AM393_RS25325 0c853c3ff3b7f551f7041c4d85a5aeb9 372 Pfam PF00107 Zinc-binding dehydrogenase 197 329 1.7E-24 T 28-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AM393_RS25325 0c853c3ff3b7f551f7041c4d85a5aeb9 372 SUPERFAMILY SSF51735 160 334 1.71E-46 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS25325 0c853c3ff3b7f551f7041c4d85a5aeb9 372 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 151 8.9E-26 T 28-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AM393_RS05070 d013bb95d5bcb3aa3d1f818a04d1f0eb 140 Hamap MF_01662 L-fucose mutarotase [fucU]. 1 140 46.898 T 28-03-2018 IPR023751 L-fucose mutarotase GO:0016854|GO:0042354|GO:0042806 AM393_RS05070 d013bb95d5bcb3aa3d1f818a04d1f0eb 140 Pfam PF05025 RbsD / FucU transport protein family 3 139 9.7E-37 T 28-03-2018 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 AM393_RS05070 d013bb95d5bcb3aa3d1f818a04d1f0eb 140 SUPERFAMILY SSF102546 1 139 3.14E-40 T 28-03-2018 IPR023750 RbsD-like domain GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 AM393_RS05070 d013bb95d5bcb3aa3d1f818a04d1f0eb 140 Gene3D G3DSA:3.40.1650.10 1 140 9.2E-49 T 28-03-2018 IPR023750 RbsD-like domain GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 AM393_RS09760 07b0efc7d43ecbfcf0f7ac67fb128ef0 287 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 287 5.4E-137 T 28-03-2018 IPR005229 Conserved hypothetical protein CHP00255 AM393_RS09760 07b0efc7d43ecbfcf0f7ac67fb128ef0 287 Pfam PF03755 YicC-like family, N-terminal region 2 153 4.9E-44 T 28-03-2018 IPR013527 YicC-like, N-terminal AM393_RS09760 07b0efc7d43ecbfcf0f7ac67fb128ef0 287 Pfam PF08340 Domain of unknown function (DUF1732) 203 287 2.6E-34 T 28-03-2018 IPR013551 Domain of unknown function DUF1732 AM393_RS01250 3f70ebb6647d26983193c553651a25f3 2035 SUPERFAMILY SSF52777 1669 1908 2.45E-40 T 28-03-2018 AM393_RS01250 3f70ebb6647d26983193c553651a25f3 2035 SUPERFAMILY SSF53335 1164 1320 1.34E-16 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM393_RS01250 3f70ebb6647d26983193c553651a25f3 2035 Gene3D G3DSA:3.40.50.150 1137 1312 8.4E-14 T 28-03-2018 AM393_RS01250 3f70ebb6647d26983193c553651a25f3 2035 SUPERFAMILY SSF47336 1405 1475 5.61E-15 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain AM393_RS01250 3f70ebb6647d26983193c553651a25f3 2035 Gene3D G3DSA:3.30.300.30 959 1083 3.9E-12 T 28-03-2018 AM393_RS01250 3f70ebb6647d26983193c553651a25f3 2035 Gene3D G3DSA:1.10.1200.10 20 97 7.3E-10 T 28-03-2018 AM393_RS01250 3f70ebb6647d26983193c553651a25f3 2035 Pfam PF00501 AMP-binding enzyme 575 965 1.0E-92 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AM393_RS01250 3f70ebb6647d26983193c553651a25f3 2035 Gene3D G3DSA:3.40.50.980 564 714 1.8E-38 T 28-03-2018 AM393_RS01250 3f70ebb6647d26983193c553651a25f3 2035 SUPERFAMILY SSF52777 1489 1680 5.56E-20 T 28-03-2018 AM393_RS01250 3f70ebb6647d26983193c553651a25f3 2035 Pfam PF00668 Condensation domain 150 535 3.1E-23 T 28-03-2018 IPR001242 Condensation domain AM393_RS01250 3f70ebb6647d26983193c553651a25f3 2035 Pfam PF00668 Condensation domain 1530 1905 1.1E-26 T 28-03-2018 IPR001242 Condensation domain AM393_RS01250 3f70ebb6647d26983193c553651a25f3 2035 SMART SM00823 Phosphopantetheine attachment site 1949 2017 0.0012 T 28-03-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 AM393_RS01250 3f70ebb6647d26983193c553651a25f3 2035 SMART SM00823 Phosphopantetheine attachment site 1410 1478 0.12 T 28-03-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 AM393_RS01250 3f70ebb6647d26983193c553651a25f3 2035 SUPERFAMILY SSF47336 21 124 3.89E-9 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain AM393_RS01250 3f70ebb6647d26983193c553651a25f3 2035 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 594 990 5.6E-119 T 28-03-2018 IPR010071 Amino acid adenylation domain AM393_RS01250 3f70ebb6647d26983193c553651a25f3 2035 Gene3D G3DSA:3.30.300.30 1313 1399 2.2E-13 T 28-03-2018 AM393_RS01250 3f70ebb6647d26983193c553651a25f3 2035 SUPERFAMILY SSF56801 1344 1422 2.62E-137 T 28-03-2018 AM393_RS01250 3f70ebb6647d26983193c553651a25f3 2035 SUPERFAMILY SSF56801 549 1018 2.62E-137 T 28-03-2018 AM393_RS01250 3f70ebb6647d26983193c553651a25f3 2035 Gene3D G3DSA:3.30.559.10 98 303 1.5E-20 T 28-03-2018 AM393_RS01250 3f70ebb6647d26983193c553651a25f3 2035 Gene3D G3DSA:3.30.559.10 1478 1673 1.0E-19 T 28-03-2018 AM393_RS01250 3f70ebb6647d26983193c553651a25f3 2035 SUPERFAMILY SSF52777 296 536 1.07E-37 T 28-03-2018 AM393_RS01250 3f70ebb6647d26983193c553651a25f3 2035 Pfam PF08242 Methyltransferase domain 1182 1279 3.4E-9 T 28-03-2018 IPR013217 Methyltransferase type 12 AM393_RS01250 3f70ebb6647d26983193c553651a25f3 2035 Gene3D G3DSA:1.10.1200.10 1944 2019 1.6E-11 T 28-03-2018 AM393_RS01250 3f70ebb6647d26983193c553651a25f3 2035 Gene3D G3DSA:3.40.50.980 715 875 8.7E-37 T 28-03-2018 AM393_RS01250 3f70ebb6647d26983193c553651a25f3 2035 SUPERFAMILY SSF47336 1946 2014 1.87E-9 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain AM393_RS01250 3f70ebb6647d26983193c553651a25f3 2035 ProSitePatterns PS00455 Putative AMP-binding domain signature. 709 720 - T 28-03-2018 IPR020845 AMP-binding, conserved site AM393_RS01250 3f70ebb6647d26983193c553651a25f3 2035 Gene3D G3DSA:2.30.38.10 879 956 2.4E-22 T 28-03-2018 AM393_RS01250 3f70ebb6647d26983193c553651a25f3 2035 ProSitePatterns PS00012 Phosphopantetheine attachment site. 47 62 - T 28-03-2018 IPR006162 Phosphopantetheine attachment site AM393_RS01250 3f70ebb6647d26983193c553651a25f3 2035 Pfam PF00550 Phosphopantetheine attachment site 1412 1473 2.9E-9 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain AM393_RS01250 3f70ebb6647d26983193c553651a25f3 2035 Pfam PF00550 Phosphopantetheine attachment site 1952 2013 4.2E-8 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain AM393_RS01250 3f70ebb6647d26983193c553651a25f3 2035 Pfam PF00550 Phosphopantetheine attachment site 22 82 1.0E-6 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain AM393_RS01250 3f70ebb6647d26983193c553651a25f3 2035 Gene3D G3DSA:1.10.1200.10 1407 1477 2.3E-17 T 28-03-2018 AM393_RS01250 3f70ebb6647d26983193c553651a25f3 2035 SUPERFAMILY SSF52777 117 289 1.11E-18 T 28-03-2018 AM393_RS05270 997f14c0d172968de3437a32eff0c9ae 116 PIRSF PIRSF011503 1 114 8.0E-44 T 28-03-2018 IPR009192 Diol/glycerol dehydratase reactivating factor, small subunit AM393_RS05270 997f14c0d172968de3437a32eff0c9ae 116 Gene3D G3DSA:3.40.50.10150 5 115 1.2E-41 T 28-03-2018 IPR010254 B12-dependent dehydratases, beta subunit AM393_RS05270 997f14c0d172968de3437a32eff0c9ae 116 SUPERFAMILY SSF52968 2 115 5.36E-38 T 28-03-2018 IPR010254 B12-dependent dehydratases, beta subunit AM393_RS05270 997f14c0d172968de3437a32eff0c9ae 116 Pfam PF02288 Dehydratase medium subunit 7 111 3.3E-33 T 28-03-2018 IPR003208 Diol/glycerol dehydratase/dehydratase reactivating factor AM393_RS21905 bdf0f554dec4f23cdc7aef320002dd4b 321 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 173 204 - T 28-03-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 AM393_RS21905 bdf0f554dec4f23cdc7aef320002dd4b 321 Gene3D G3DSA:3.20.20.120 116 321 2.5E-42 T 28-03-2018 IPR029065 Enolase C-terminal domain-like AM393_RS21905 bdf0f554dec4f23cdc7aef320002dd4b 321 SMART SM00922 130 223 5.6E-19 T 28-03-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal AM393_RS21905 bdf0f554dec4f23cdc7aef320002dd4b 321 Gene3D G3DSA:3.30.390.10 1 115 1.5E-29 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM393_RS21905 bdf0f554dec4f23cdc7aef320002dd4b 321 SUPERFAMILY SSF51604 116 318 2.49E-52 T 28-03-2018 IPR029065 Enolase C-terminal domain-like AM393_RS21905 bdf0f554dec4f23cdc7aef320002dd4b 321 Pfam PF13378 Enolase C-terminal domain-like 133 319 2.0E-24 T 28-03-2018 IPR029065 Enolase C-terminal domain-like AM393_RS21905 bdf0f554dec4f23cdc7aef320002dd4b 321 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 2 112 1.7E-26 T 28-03-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain AM393_RS21905 bdf0f554dec4f23cdc7aef320002dd4b 321 SUPERFAMILY SSF54826 2 112 1.36E-34 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM393_RS15910 34670c3536bb56baa0f6ecf9347c2e6c 312 TIGRFAM TIGR03431 PhnD: phosphonate ABC transporter, periplasmic phosphonate binding protein 11 307 1.4E-90 T 28-03-2018 IPR017797 Phosphonate ABC transporter, substrate-binding protein GO:0015716|GO:0043190 AM393_RS15910 34670c3536bb56baa0f6ecf9347c2e6c 312 TIGRFAM TIGR01098 3A0109s03R: phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein 1 272 1.9E-79 T 28-03-2018 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein GO:0043190|GO:0055085 AM393_RS15910 34670c3536bb56baa0f6ecf9347c2e6c 312 Gene3D G3DSA:3.40.190.10 51 135 7.8E-5 T 28-03-2018 AM393_RS15910 34670c3536bb56baa0f6ecf9347c2e6c 312 SUPERFAMILY SSF53850 49 303 3.63E-45 T 28-03-2018 AM393_RS15910 34670c3536bb56baa0f6ecf9347c2e6c 312 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 35 288 7.4E-49 T 28-03-2018 AM393_RS15910 34670c3536bb56baa0f6ecf9347c2e6c 312 Gene3D G3DSA:3.40.190.10 136 247 2.6E-28 T 28-03-2018 AM393_RS12245 f4f589fb80ffd95c3f670814f2d976fe 222 Gene3D G3DSA:3.40.30.10 1 97 5.9E-26 T 28-03-2018 AM393_RS12245 f4f589fb80ffd95c3f670814f2d976fe 222 Pfam PF00043 Glutathione S-transferase, C-terminal domain 143 205 3.7E-5 T 28-03-2018 IPR004046 Glutathione S-transferase, C-terminal AM393_RS12245 f4f589fb80ffd95c3f670814f2d976fe 222 Gene3D G3DSA:1.20.1050.10 98 216 1.3E-22 T 28-03-2018 AM393_RS12245 f4f589fb80ffd95c3f670814f2d976fe 222 SUPERFAMILY SSF47616 82 215 1.53E-21 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like AM393_RS12245 f4f589fb80ffd95c3f670814f2d976fe 222 Pfam PF02798 Glutathione S-transferase, N-terminal domain 4 73 3.2E-18 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AM393_RS12245 f4f589fb80ffd95c3f670814f2d976fe 222 SUPERFAMILY SSF52833 1 82 5.61E-21 T 28-03-2018 IPR012336 Thioredoxin-like fold AM393_RS24360 e26b3612557071ecdfb23083f1544b6d 424 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 267 379 7.4E-34 T 28-03-2018 IPR014031 Beta-ketoacyl synthase, C-terminal AM393_RS24360 e26b3612557071ecdfb23083f1544b6d 424 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 6 421 2.7E-168 T 28-03-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 AM393_RS24360 e26b3612557071ecdfb23083f1544b6d 424 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 166 182 - T 28-03-2018 IPR018201 Beta-ketoacyl synthase, active site AM393_RS24360 e26b3612557071ecdfb23083f1544b6d 424 Gene3D G3DSA:3.40.47.10 275 424 1.8E-46 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM393_RS24360 e26b3612557071ecdfb23083f1544b6d 424 SUPERFAMILY SSF53901 227 423 1.31E-66 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM393_RS24360 e26b3612557071ecdfb23083f1544b6d 424 SUPERFAMILY SSF53901 6 264 6.05E-75 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM393_RS24360 e26b3612557071ecdfb23083f1544b6d 424 PIRSF PIRSF000447 3 424 1.4E-164 T 28-03-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 AM393_RS24360 e26b3612557071ecdfb23083f1544b6d 424 Gene3D G3DSA:3.40.47.10 3 271 4.4E-82 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM393_RS24360 e26b3612557071ecdfb23083f1544b6d 424 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 6 259 4.6E-61 T 28-03-2018 IPR014030 Beta-ketoacyl synthase, N-terminal AM393_RS24360 e26b3612557071ecdfb23083f1544b6d 424 SMART SM00825 Beta-ketoacyl synthase 8 423 8.3E-15 T 28-03-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AM393_RS25660 8e270c485726ee6902b9a5d5f52be335 256 Gene3D G3DSA:1.10.10.10 7 63 6.6E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS25660 8e270c485726ee6902b9a5d5f52be335 256 Pfam PF08220 DeoR-like helix-turn-helix domain 11 63 2.0E-14 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM393_RS25660 8e270c485726ee6902b9a5d5f52be335 256 SMART SM01134 76 237 5.9E-58 T 28-03-2018 AM393_RS25660 8e270c485726ee6902b9a5d5f52be335 256 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 43 61 6.9E-8 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM393_RS25660 8e270c485726ee6902b9a5d5f52be335 256 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 29 43 6.9E-8 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM393_RS25660 8e270c485726ee6902b9a5d5f52be335 256 SUPERFAMILY SSF46785 10 63 2.9E-10 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS25660 8e270c485726ee6902b9a5d5f52be335 256 SUPERFAMILY SSF100950 78 235 1.26E-21 T 28-03-2018 AM393_RS25660 8e270c485726ee6902b9a5d5f52be335 256 Gene3D G3DSA:3.40.50.1360 68 243 2.8E-31 T 28-03-2018 AM393_RS25660 8e270c485726ee6902b9a5d5f52be335 256 Pfam PF00455 DeoR C terminal sensor domain 78 235 5.1E-40 T 28-03-2018 IPR014036 DeoR C-terminal sensor domain AM393_RS25660 8e270c485726ee6902b9a5d5f52be335 256 ProSitePatterns PS00894 DeoR-type HTH domain signature. 11 45 - T 28-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 AM393_RS25660 8e270c485726ee6902b9a5d5f52be335 256 SMART SM00420 11 63 9.5E-15 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM393_RS18870 acb0458e997d4d69dc24095722f5cb3d 229 Gene3D G3DSA:1.10.3720.10 5 227 3.9E-38 T 28-03-2018 AM393_RS18870 acb0458e997d4d69dc24095722f5cb3d 229 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 26 227 1.1E-22 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS18870 acb0458e997d4d69dc24095722f5cb3d 229 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 12 221 5.7E-72 T 28-03-2018 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 AM393_RS18870 acb0458e997d4d69dc24095722f5cb3d 229 SUPERFAMILY SSF161098 4 220 1.26E-50 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS00375 b49e37db952bc0b978ffcdac6db787cd 61 Hamap MF_00507 UPF0181 protein YoaH [yoaH]. 1 58 20.131 T 28-03-2018 IPR005371 Uncharacterised protein family UPF0181 AM393_RS00375 b49e37db952bc0b978ffcdac6db787cd 61 Pfam PF03701 Uncharacterised protein family (UPF0181) 1 49 2.7E-27 T 28-03-2018 IPR005371 Uncharacterised protein family UPF0181 AM393_RS00375 b49e37db952bc0b978ffcdac6db787cd 61 ProDom PD026807 UPF0181 YOAH YPTB1650 VV20310 VPA0916 VCA0569 YPO1774/Y2534/YP1619 PLU2693 VVA0806 PM0480 1 48 5.0E-18 T 28-03-2018 IPR005371 Uncharacterised protein family UPF0181 AM393_RS21040 72db5560519e3ab68d718ab504c4a009 336 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 6 325 4.4E-96 T 28-03-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 AM393_RS21040 72db5560519e3ab68d718ab504c4a009 336 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 6 213 8.0E-42 T 28-03-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 AM393_RS13780 78b782c6214800f58e26f826ea2a7e1d 154 Gene3D G3DSA:1.10.10.10 8 154 4.1E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS13780 78b782c6214800f58e26f826ea2a7e1d 154 PRINTS PR00598 Bacterial regulatory protein MarR family signature 71 86 1.3E-8 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM393_RS13780 78b782c6214800f58e26f826ea2a7e1d 154 PRINTS PR00598 Bacterial regulatory protein MarR family signature 54 70 1.3E-8 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM393_RS13780 78b782c6214800f58e26f826ea2a7e1d 154 PRINTS PR00598 Bacterial regulatory protein MarR family signature 90 106 1.3E-8 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM393_RS13780 78b782c6214800f58e26f826ea2a7e1d 154 Pfam PF01047 MarR family 36 94 5.1E-10 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM393_RS13780 78b782c6214800f58e26f826ea2a7e1d 154 SMART SM00347 29 130 1.0E-16 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM393_RS13780 78b782c6214800f58e26f826ea2a7e1d 154 SUPERFAMILY SSF46785 9 148 8.94E-30 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS00255 a9db0aa056ea00e459f94168244520ba 580 SUPERFAMILY SSF48208 42 543 3.21E-171 T 28-03-2018 IPR008928 Six-hairpin glycosidase-like GO:0003824 AM393_RS00255 a9db0aa056ea00e459f94168244520ba 580 ProSitePatterns PS00927 Trehalase signature 1. 153 166 - T 28-03-2018 IPR018232 Glycoside hydrolase, family 37, conserved site GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 AM393_RS00255 a9db0aa056ea00e459f94168244520ba 580 PRINTS PR00744 Glycosyl hydrolase family 37 signature 443 459 4.9E-48 T 28-03-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 AM393_RS00255 a9db0aa056ea00e459f94168244520ba 580 PRINTS PR00744 Glycosyl hydrolase family 37 signature 520 533 4.9E-48 T 28-03-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 AM393_RS00255 a9db0aa056ea00e459f94168244520ba 580 PRINTS PR00744 Glycosyl hydrolase family 37 signature 304 321 4.9E-48 T 28-03-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 AM393_RS00255 a9db0aa056ea00e459f94168244520ba 580 PRINTS PR00744 Glycosyl hydrolase family 37 signature 379 395 4.9E-48 T 28-03-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 AM393_RS00255 a9db0aa056ea00e459f94168244520ba 580 PRINTS PR00744 Glycosyl hydrolase family 37 signature 270 287 4.9E-48 T 28-03-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 AM393_RS00255 a9db0aa056ea00e459f94168244520ba 580 PRINTS PR00744 Glycosyl hydrolase family 37 signature 336 353 4.9E-48 T 28-03-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 AM393_RS00255 a9db0aa056ea00e459f94168244520ba 580 PRINTS PR00744 Glycosyl hydrolase family 37 signature 195 213 4.9E-48 T 28-03-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 AM393_RS00255 a9db0aa056ea00e459f94168244520ba 580 Gene3D G3DSA:1.50.10.10 35 542 1.0E-153 T 28-03-2018 AM393_RS00255 a9db0aa056ea00e459f94168244520ba 580 Pfam PF01204 Trehalase 59 536 9.4E-169 T 28-03-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 AM393_RS00255 a9db0aa056ea00e459f94168244520ba 580 ProSitePatterns PS00928 Trehalase signature 2. 450 459 - T 28-03-2018 IPR018232 Glycoside hydrolase, family 37, conserved site GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 AM393_RS00255 a9db0aa056ea00e459f94168244520ba 580 Hamap MF_01060 Periplasmic trehalase [treA]. 2 538 87.295 T 28-03-2018 IPR023720 Trehalase, periplasmic GO:0004555|GO:0005993|GO:0042597|GO:0071474 KEGG: 00500+3.2.1.28 AM393_RS15245 ca0682784f6e5c428c2a6c222444e15e 660 SUPERFAMILY SSF81345 344 657 1.44E-71 T 28-03-2018 IPR029022 ABC transporter, BtuC-like AM393_RS15245 ca0682784f6e5c428c2a6c222444e15e 660 Gene3D G3DSA:1.10.3470.10 1 331 1.7E-49 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AM393_RS15245 ca0682784f6e5c428c2a6c222444e15e 660 Gene3D G3DSA:1.10.3470.10 342 660 3.7E-49 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AM393_RS15245 ca0682784f6e5c428c2a6c222444e15e 660 Pfam PF01032 FecCD transport family 358 657 2.3E-74 T 28-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 AM393_RS15245 ca0682784f6e5c428c2a6c222444e15e 660 Pfam PF01032 FecCD transport family 17 323 6.3E-66 T 28-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 AM393_RS15245 ca0682784f6e5c428c2a6c222444e15e 660 SUPERFAMILY SSF81345 6 325 4.97E-60 T 28-03-2018 IPR029022 ABC transporter, BtuC-like AM393_RS15225 c17bb8516bc0735a9f23f0d9a94768bc 850 SUPERFAMILY SSF56601 362 384 2.0E-108 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AM393_RS15225 c17bb8516bc0735a9f23f0d9a94768bc 850 SUPERFAMILY SSF56601 412 788 2.0E-108 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AM393_RS15225 c17bb8516bc0735a9f23f0d9a94768bc 850 TIGRFAM TIGR02071 PBP_1b: penicillin-binding protein 1B 68 792 0.0 T 28-03-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00500+2.4.1.12|KEGG: 00550+2.4.1.129|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AM393_RS15225 c17bb8516bc0735a9f23f0d9a94768bc 850 PIRSF PIRSF002799 36 847 0.0 T 28-03-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00500+2.4.1.12|KEGG: 00550+2.4.1.129|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AM393_RS15225 c17bb8516bc0735a9f23f0d9a94768bc 850 Pfam PF14814 Bifunctional transglycosylase second domain 113 197 1.7E-28 T 28-03-2018 IPR028166 Bifunctional transglycosylase second domain KEGG: 00500+2.4.1.12|KEGG: 00550+2.4.1.129|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AM393_RS15225 c17bb8516bc0735a9f23f0d9a94768bc 850 Gene3D G3DSA:1.10.3810.10 199 397 2.5E-61 T 28-03-2018 IPR001264 Glycosyl transferase, family 51 AM393_RS15225 c17bb8516bc0735a9f23f0d9a94768bc 850 Pfam PF00905 Penicillin binding protein transpeptidase domain 473 713 1.6E-26 T 28-03-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AM393_RS15225 c17bb8516bc0735a9f23f0d9a94768bc 850 Gene3D G3DSA:3.40.710.10 406 839 1.2E-96 T 28-03-2018 AM393_RS15225 c17bb8516bc0735a9f23f0d9a94768bc 850 Gene3D G3DSA:1.20.5.100 57 95 2.3E-17 T 28-03-2018 AM393_RS15225 c17bb8516bc0735a9f23f0d9a94768bc 850 Pfam PF00912 Transglycosylase 209 380 2.9E-54 T 28-03-2018 IPR001264 Glycosyl transferase, family 51 AM393_RS15225 c17bb8516bc0735a9f23f0d9a94768bc 850 SUPERFAMILY SSF53955 196 403 5.91E-65 T 28-03-2018 IPR023346 Lysozyme-like domain AM393_RS15225 c17bb8516bc0735a9f23f0d9a94768bc 850 Gene3D G3DSA:3.30.2060.10 112 198 4.3E-28 T 28-03-2018 AM393_RS15225 c17bb8516bc0735a9f23f0d9a94768bc 850 Pfam PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal 1 79 2.8E-29 T 28-03-2018 IPR032730 Transglycosylase PBP1b, N-terminal transmembrane domain AM393_RS25495 4528ba177b8a3dfb07b00992be5b9286 173 Gene3D G3DSA:2.60.40.200 20 173 6.9E-33 T 28-03-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AM393_RS25495 4528ba177b8a3dfb07b00992be5b9286 173 ProSitePatterns PS00332 Copper/Zinc superoxide dismutase signature 2. 161 172 - T 28-03-2018 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AM393_RS25495 4528ba177b8a3dfb07b00992be5b9286 173 SUPERFAMILY SSF49329 25 173 2.36E-43 T 28-03-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AM393_RS25495 4528ba177b8a3dfb07b00992be5b9286 173 Pfam PF00080 Copper/zinc superoxide dismutase (SODC) 33 172 1.2E-28 T 28-03-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AM393_RS29030 f134feaab1115e472c5a755ffcf1f517 121 Gene3D G3DSA:1.10.1660.10 1 58 5.2E-11 T 28-03-2018 AM393_RS29030 f134feaab1115e472c5a755ffcf1f517 121 Gene3D G3DSA:1.10.1660.10 59 120 6.2E-5 T 28-03-2018 AM393_RS29030 f134feaab1115e472c5a755ffcf1f517 121 SUPERFAMILY SSF46955 4 108 4.03E-16 T 28-03-2018 IPR009061 Putative DNA-binding domain AM393_RS29030 f134feaab1115e472c5a755ffcf1f517 121 Pfam PF13411 MerR HTH family regulatory protein 4 72 1.2E-11 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM393_RS29030 f134feaab1115e472c5a755ffcf1f517 121 TIGRFAM TIGR02054 MerD: mercuric resistence transcriptional repressor protein MerD 1 119 2.0E-61 T 28-03-2018 IPR011797 Mercuric resistence transcriptional repressor protein MerD GO:0003677|GO:0045892|GO:0046689 AM393_RS29030 f134feaab1115e472c5a755ffcf1f517 121 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 16 29 5.7E-15 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM393_RS29030 f134feaab1115e472c5a755ffcf1f517 121 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 40 60 5.7E-15 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM393_RS29030 f134feaab1115e472c5a755ffcf1f517 121 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 5 16 5.7E-15 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM393_RS29030 f134feaab1115e472c5a755ffcf1f517 121 SMART SM00422 4 73 4.5E-21 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM393_RS28090 c7b89c42d550cd548324c55fc9a7eebb 302 PIRSF PIRSF015558 4 291 2.5E-91 T 28-03-2018 IPR016634 WYL domain protein, s026 type AM393_RS28090 c7b89c42d550cd548324c55fc9a7eebb 302 Pfam PF13280 WYL domain 125 245 5.9E-13 T 28-03-2018 IPR026881 WYL domain AM393_RS02395 5f8f10e18f4c7434fa34e01108729feb 773 Gene3D G3DSA:3.40.50.300 434 752 1.5E-13 T 28-03-2018 AM393_RS02395 5f8f10e18f4c7434fa34e01108729feb 773 Pfam PF02463 RecF/RecN/SMC N terminal domain 6 747 1.5E-17 T 28-03-2018 IPR003395 RecF/RecN/SMC, N-terminal AM393_RS02395 5f8f10e18f4c7434fa34e01108729feb 773 SUPERFAMILY SSF52540 578 750 6.23E-24 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS02395 5f8f10e18f4c7434fa34e01108729feb 773 SUPERFAMILY SSF52540 375 411 6.23E-24 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS02395 5f8f10e18f4c7434fa34e01108729feb 773 SUPERFAMILY SSF52540 5 196 6.23E-24 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS02395 5f8f10e18f4c7434fa34e01108729feb 773 Gene3D G3DSA:3.40.50.300 4 205 4.9E-17 T 28-03-2018 AM393_RS11195 741f04d44b59d81c27bb6fcaa2cf5823 548 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 374 522 2.5E-49 T 28-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AM393_RS11195 741f04d44b59d81c27bb6fcaa2cf5823 548 SUPERFAMILY SSF52467 182 341 6.55E-57 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AM393_RS11195 741f04d44b59d81c27bb6fcaa2cf5823 548 Gene3D G3DSA:3.40.50.970 334 534 9.2E-49 T 28-03-2018 AM393_RS11195 741f04d44b59d81c27bb6fcaa2cf5823 548 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 411 430 - T 28-03-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 AM393_RS11195 741f04d44b59d81c27bb6fcaa2cf5823 548 SUPERFAMILY SSF52518 1 173 9.67E-63 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold AM393_RS11195 741f04d44b59d81c27bb6fcaa2cf5823 548 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 1 167 4.7E-57 T 28-03-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 AM393_RS11195 741f04d44b59d81c27bb6fcaa2cf5823 548 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 186 321 3.6E-41 T 28-03-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 AM393_RS11195 741f04d44b59d81c27bb6fcaa2cf5823 548 SUPERFAMILY SSF52518 357 546 7.15E-65 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold AM393_RS11195 741f04d44b59d81c27bb6fcaa2cf5823 548 Gene3D G3DSA:3.40.50.970 1 184 9.9E-61 T 28-03-2018 AM393_RS11195 741f04d44b59d81c27bb6fcaa2cf5823 548 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 1 545 1.2E-215 T 28-03-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 AM393_RS11195 741f04d44b59d81c27bb6fcaa2cf5823 548 Gene3D G3DSA:3.40.50.1220 185 333 5.1E-47 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AM393_RS15240 a88eec5b8b93420b089c8c8de8ba3680 296 Pfam PF01497 Periplasmic binding protein 38 269 1.6E-28 T 28-03-2018 IPR002491 ABC transporter periplasmic binding domain GO:0005488 AM393_RS15240 a88eec5b8b93420b089c8c8de8ba3680 296 SUPERFAMILY SSF53807 33 290 5.89E-61 T 28-03-2018 AM393_RS15240 a88eec5b8b93420b089c8c8de8ba3680 296 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 55 73 5.2E-51 T 28-03-2018 IPR008091 Ferrichrome-binding periplasmic protein AM393_RS15240 a88eec5b8b93420b089c8c8de8ba3680 296 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 236 253 5.2E-51 T 28-03-2018 IPR008091 Ferrichrome-binding periplasmic protein AM393_RS15240 a88eec5b8b93420b089c8c8de8ba3680 296 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 86 101 5.2E-51 T 28-03-2018 IPR008091 Ferrichrome-binding periplasmic protein AM393_RS15240 a88eec5b8b93420b089c8c8de8ba3680 296 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 273 286 5.2E-51 T 28-03-2018 IPR008091 Ferrichrome-binding periplasmic protein AM393_RS15240 a88eec5b8b93420b089c8c8de8ba3680 296 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 184 199 5.2E-51 T 28-03-2018 IPR008091 Ferrichrome-binding periplasmic protein AM393_RS15240 a88eec5b8b93420b089c8c8de8ba3680 296 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 208 226 5.2E-51 T 28-03-2018 IPR008091 Ferrichrome-binding periplasmic protein AM393_RS15240 a88eec5b8b93420b089c8c8de8ba3680 296 Gene3D G3DSA:3.40.50.1980 138 291 1.4E-28 T 28-03-2018 AM393_RS15240 a88eec5b8b93420b089c8c8de8ba3680 296 Gene3D G3DSA:3.40.50.1980 23 137 4.2E-18 T 28-03-2018 AM393_RS27575 b847a4ca90689e51a979244750dde49b 66 Gene3D G3DSA:3.90.820.10 4 62 1.6E-6 T 28-03-2018 AM393_RS08120 0ac16b641a1be028fd5dcfcdf943777b 184 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 15 46 9.8E-4 T 28-03-2018 IPR001451 Hexapeptide repeat AM393_RS08120 0ac16b641a1be028fd5dcfcdf943777b 184 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 97 130 3.5E-9 T 28-03-2018 IPR001451 Hexapeptide repeat AM393_RS08120 0ac16b641a1be028fd5dcfcdf943777b 184 SUPERFAMILY SSF51161 6 176 1.8E-45 T 28-03-2018 IPR011004 Trimeric LpxA-like AM393_RS08120 0ac16b641a1be028fd5dcfcdf943777b 184 Gene3D G3DSA:2.160.10.10 2 184 6.0E-43 T 28-03-2018 AM393_RS10595 ff376689ac5e377d7b24fd9fec95f51a 296 Pfam PF13407 Periplasmic binding protein domain 29 281 2.4E-60 T 28-03-2018 IPR025997 Periplasmic binding protein AM393_RS10595 ff376689ac5e377d7b24fd9fec95f51a 296 SUPERFAMILY SSF53822 26 295 4.85E-90 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AM393_RS10595 ff376689ac5e377d7b24fd9fec95f51a 296 Gene3D G3DSA:3.40.50.2300 141 293 1.8E-45 T 28-03-2018 AM393_RS10595 ff376689ac5e377d7b24fd9fec95f51a 296 Gene3D G3DSA:3.40.50.2300 25 140 1.2E-27 T 28-03-2018 AM393_RS01620 eaa895e9f09a212cd7f3236a9782f89a 700 Pfam PF14492 Elongation Factor G, domain II 409 482 6.9E-36 T 28-03-2018 AM393_RS01620 eaa895e9f09a212cd7f3236a9782f89a 700 Pfam PF03144 Elongation factor Tu domain 2 329 396 7.7E-18 T 28-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AM393_RS01620 eaa895e9f09a212cd7f3236a9782f89a 700 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 28-03-2018 IPR031157 Tr-type G domain, conserved site AM393_RS01620 eaa895e9f09a212cd7f3236a9782f89a 700 Pfam PF03764 Elongation factor G, domain IV 484 603 1.8E-47 T 28-03-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 AM393_RS01620 eaa895e9f09a212cd7f3236a9782f89a 700 Gene3D G3DSA:3.30.230.10 499 619 8.4E-44 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AM393_RS01620 eaa895e9f09a212cd7f3236a9782f89a 700 Gene3D G3DSA:3.40.50.300 5 293 1.2E-52 T 28-03-2018 AM393_RS01620 eaa895e9f09a212cd7f3236a9782f89a 700 SMART SM00838 606 693 1.0E-54 T 28-03-2018 IPR000640 Elongation factor EFG, domain V-like AM393_RS01620 eaa895e9f09a212cd7f3236a9782f89a 700 Gene3D G3DSA:3.30.70.240 620 697 9.2E-32 T 28-03-2018 AM393_RS01620 eaa895e9f09a212cd7f3236a9782f89a 700 Hamap MF_00054_B Elongation factor G [fusA]. 6 697 109.059 T 28-03-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AM393_RS01620 eaa895e9f09a212cd7f3236a9782f89a 700 Gene3D G3DSA:2.40.30.10 295 406 2.2E-33 T 28-03-2018 AM393_RS01620 eaa895e9f09a212cd7f3236a9782f89a 700 SUPERFAMILY SSF54980 407 485 2.77E-25 T 28-03-2018 IPR035647 EF-G domain III/V-like AM393_RS01620 eaa895e9f09a212cd7f3236a9782f89a 700 SUPERFAMILY SSF54211 484 605 1.64E-44 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM393_RS01620 eaa895e9f09a212cd7f3236a9782f89a 700 Gene3D G3DSA:3.30.70.870 407 498 1.1E-37 T 28-03-2018 AM393_RS01620 eaa895e9f09a212cd7f3236a9782f89a 700 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 187 6.7E-31 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AM393_RS01620 eaa895e9f09a212cd7f3236a9782f89a 700 SUPERFAMILY SSF52540 6 288 1.3E-104 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS01620 eaa895e9f09a212cd7f3236a9782f89a 700 PRINTS PR00315 GTP-binding elongation factor signature 137 146 4.2E-16 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM393_RS01620 eaa895e9f09a212cd7f3236a9782f89a 700 PRINTS PR00315 GTP-binding elongation factor signature 58 66 4.2E-16 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM393_RS01620 eaa895e9f09a212cd7f3236a9782f89a 700 PRINTS PR00315 GTP-binding elongation factor signature 85 95 4.2E-16 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM393_RS01620 eaa895e9f09a212cd7f3236a9782f89a 700 PRINTS PR00315 GTP-binding elongation factor signature 12 25 4.2E-16 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM393_RS01620 eaa895e9f09a212cd7f3236a9782f89a 700 PRINTS PR00315 GTP-binding elongation factor signature 101 112 4.2E-16 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM393_RS01620 eaa895e9f09a212cd7f3236a9782f89a 700 SUPERFAMILY SSF50447 271 409 2.87E-37 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain AM393_RS01620 eaa895e9f09a212cd7f3236a9782f89a 700 Pfam PF00679 Elongation factor G C-terminus 606 692 2.9E-31 T 28-03-2018 IPR000640 Elongation factor EFG, domain V-like AM393_RS01620 eaa895e9f09a212cd7f3236a9782f89a 700 SMART SM00889 485 604 4.6E-73 T 28-03-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 AM393_RS01620 eaa895e9f09a212cd7f3236a9782f89a 700 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 697 0.0 T 28-03-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AM393_RS01620 eaa895e9f09a212cd7f3236a9782f89a 700 SUPERFAMILY SSF54980 609 696 6.23E-30 T 28-03-2018 IPR035647 EF-G domain III/V-like AM393_RS01620 eaa895e9f09a212cd7f3236a9782f89a 700 Pfam PF00009 Elongation factor Tu GTP binding domain 9 288 1.1E-64 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM393_RS14000 adef22eda86e52ba39bc6bb323c3cdf6 177 Gene3D G3DSA:3.40.630.30 6 91 1.8E-10 T 28-03-2018 AM393_RS14000 adef22eda86e52ba39bc6bb323c3cdf6 177 SUPERFAMILY SSF55729 12 148 9.03E-25 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM393_RS14000 adef22eda86e52ba39bc6bb323c3cdf6 177 Gene3D G3DSA:3.40.630.30 92 148 1.9E-13 T 28-03-2018 AM393_RS14000 adef22eda86e52ba39bc6bb323c3cdf6 177 Pfam PF00583 Acetyltransferase (GNAT) family 37 141 1.8E-14 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AM393_RS10915 efc268245319c1deec358e40238cadcf 278 SMART SM00342 187 270 2.3E-34 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM393_RS10915 efc268245319c1deec358e40238cadcf 278 Hamap MF_01534 HTH-type transcriptional activator RhaS [rhaS]. 1 273 53.795 T 28-03-2018 IPR023609 Transcription regulator HTH, RhaS GO:0003700|GO:0006355|GO:0019299 AM393_RS10915 efc268245319c1deec358e40238cadcf 278 SUPERFAMILY SSF46689 170 221 2.69E-9 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS10915 efc268245319c1deec358e40238cadcf 278 SUPERFAMILY SSF46689 223 272 7.62E-14 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS10915 efc268245319c1deec358e40238cadcf 278 Pfam PF12833 Helix-turn-helix domain 193 271 5.5E-26 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM393_RS10915 efc268245319c1deec358e40238cadcf 278 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 254 270 2.4E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM393_RS10915 efc268245319c1deec358e40238cadcf 278 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 239 254 2.4E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM393_RS10915 efc268245319c1deec358e40238cadcf 278 SUPERFAMILY SSF51215 12 157 2.22E-14 T 28-03-2018 AM393_RS10915 efc268245319c1deec358e40238cadcf 278 Gene3D G3DSA:2.60.120.280 4 162 4.5E-16 T 28-03-2018 AM393_RS10915 efc268245319c1deec358e40238cadcf 278 Gene3D G3DSA:1.10.10.60 166 227 5.5E-15 T 28-03-2018 AM393_RS10915 efc268245319c1deec358e40238cadcf 278 Gene3D G3DSA:1.10.10.60 228 275 1.5E-14 T 28-03-2018 AM393_RS10915 efc268245319c1deec358e40238cadcf 278 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 224 266 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM393_RS10915 efc268245319c1deec358e40238cadcf 278 Pfam PF02311 AraC-like ligand binding domain 16 154 7.4E-23 T 28-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AM393_RS01015 4e75e9780ed1c9dec5fe194b357f8946 316 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 63 1.0E-12 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS01015 4e75e9780ed1c9dec5fe194b357f8946 316 Pfam PF03466 LysR substrate binding domain 90 293 1.2E-40 T 28-03-2018 IPR005119 LysR, substrate-binding AM393_RS01015 4e75e9780ed1c9dec5fe194b357f8946 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 7.6E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS01015 4e75e9780ed1c9dec5fe194b357f8946 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 7.6E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS01015 4e75e9780ed1c9dec5fe194b357f8946 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 7.6E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS01015 4e75e9780ed1c9dec5fe194b357f8946 316 Gene3D G3DSA:3.40.190.10 181 267 9.4E-19 T 28-03-2018 AM393_RS01015 4e75e9780ed1c9dec5fe194b357f8946 316 SUPERFAMILY SSF46785 11 112 4.84E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS01015 4e75e9780ed1c9dec5fe194b357f8946 316 Gene3D G3DSA:1.10.10.10 1 84 1.8E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS01015 4e75e9780ed1c9dec5fe194b357f8946 316 SUPERFAMILY SSF53850 88 294 7.67E-41 T 28-03-2018 AM393_RS01015 4e75e9780ed1c9dec5fe194b357f8946 316 Gene3D G3DSA:3.40.190.10 90 180 4.2E-22 T 28-03-2018 AM393_RS00880 15c0a45701879b325ef000cd3c7ece87 610 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 9 589 4.7E-237 T 28-03-2018 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 AM393_RS00880 15c0a45701879b325ef000cd3c7ece87 610 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 386 542 2.6E-45 T 28-03-2018 IPR001162 UvrC family homology region AM393_RS00880 15c0a45701879b325ef000cd3c7ece87 610 Hamap MF_00203 UvrABC system protein C [uvrC]. 4 607 30.272 T 28-03-2018 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 AM393_RS00880 15c0a45701879b325ef000cd3c7ece87 610 SMART SM00278 588 607 130.0 T 28-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AM393_RS00880 15c0a45701879b325ef000cd3c7ece87 610 SMART SM00278 556 575 0.76 T 28-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AM393_RS00880 15c0a45701879b325ef000cd3c7ece87 610 SUPERFAMILY SSF46600 190 243 3.4E-14 T 28-03-2018 IPR001943 UVR domain GO:0005515 AM393_RS00880 15c0a45701879b325ef000cd3c7ece87 610 Pfam PF14520 Helix-hairpin-helix domain 557 607 5.9E-8 T 28-03-2018 AM393_RS00880 15c0a45701879b325ef000cd3c7ece87 610 Pfam PF02151 UvrB/uvrC motif 205 237 6.6E-10 T 28-03-2018 IPR001943 UVR domain GO:0005515 AM393_RS00880 15c0a45701879b325ef000cd3c7ece87 610 Gene3D G3DSA:1.10.150.20 527 567 0.33 T 28-03-2018 AM393_RS00880 15c0a45701879b325ef000cd3c7ece87 610 SUPERFAMILY SSF47781 521 607 8.9E-18 T 28-03-2018 IPR010994 RuvA domain 2-like AM393_RS00880 15c0a45701879b325ef000cd3c7ece87 610 SUPERFAMILY SSF82771 17 100 5.23E-24 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily AM393_RS00880 15c0a45701879b325ef000cd3c7ece87 610 Pfam PF01541 GIY-YIG catalytic domain 18 93 1.6E-10 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily AM393_RS00880 15c0a45701879b325ef000cd3c7ece87 610 Gene3D G3DSA:1.10.150.20 568 610 1.1E-10 T 28-03-2018 AM393_RS00880 15c0a45701879b325ef000cd3c7ece87 610 SMART SM00465 17 98 1.7E-23 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily AM393_RS00880 15c0a45701879b325ef000cd3c7ece87 610 Gene3D G3DSA:4.10.860.10 182 242 3.3E-16 T 28-03-2018 IPR001943 UVR domain GO:0005515 AM393_RS00880 15c0a45701879b325ef000cd3c7ece87 610 Gene3D G3DSA:3.40.1440.10 5 101 5.5E-23 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily AM393_RS16480 370c9a6058e71eb62594df08790e5d70 424 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 4 415 53.601 T 28-03-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 AM393_RS16480 370c9a6058e71eb62594df08790e5d70 424 Pfam PF07724 AAA domain (Cdc48 subfamily) 112 310 9.6E-49 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AM393_RS16480 370c9a6058e71eb62594df08790e5d70 424 SMART SM00382 111 333 1.3E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS16480 370c9a6058e71eb62594df08790e5d70 424 SUPERFAMILY SSF57716 13 48 5.84E-12 T 28-03-2018 AM393_RS16480 370c9a6058e71eb62594df08790e5d70 424 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 5 412 1.0E-215 T 28-03-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 AM393_RS16480 370c9a6058e71eb62594df08790e5d70 424 Gene3D G3DSA:1.10.8.60 317 408 4.3E-33 T 28-03-2018 AM393_RS16480 370c9a6058e71eb62594df08790e5d70 424 Gene3D G3DSA:3.40.50.300 56 315 4.6E-69 T 28-03-2018 AM393_RS16480 370c9a6058e71eb62594df08790e5d70 424 Pfam PF06689 ClpX C4-type zinc finger 13 50 1.2E-20 T 28-03-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 AM393_RS16480 370c9a6058e71eb62594df08790e5d70 424 SMART SM00994 12 51 1.0E-24 T 28-03-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 AM393_RS16480 370c9a6058e71eb62594df08790e5d70 424 SUPERFAMILY SSF52540 64 402 9.6E-73 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS16480 370c9a6058e71eb62594df08790e5d70 424 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 317 395 3.9E-17 T 28-03-2018 IPR019489 Clp ATPase, C-terminal AM393_RS16480 370c9a6058e71eb62594df08790e5d70 424 SMART SM01086 317 412 3.0E-35 T 28-03-2018 IPR019489 Clp ATPase, C-terminal AM393_RS21200 e4103c8dc246b63648a949bba6d5aed6 301 Gene3D G3DSA:3.40.190.10 89 176 5.0E-15 T 28-03-2018 AM393_RS21200 e4103c8dc246b63648a949bba6d5aed6 301 Gene3D G3DSA:3.40.190.10 177 266 1.2E-22 T 28-03-2018 AM393_RS21200 e4103c8dc246b63648a949bba6d5aed6 301 SUPERFAMILY SSF53850 88 298 3.1E-43 T 28-03-2018 AM393_RS21200 e4103c8dc246b63648a949bba6d5aed6 301 SUPERFAMILY SSF46785 4 87 2.15E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS21200 e4103c8dc246b63648a949bba6d5aed6 301 Gene3D G3DSA:1.10.10.10 3 84 2.5E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS21200 e4103c8dc246b63648a949bba6d5aed6 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 5.6E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS21200 e4103c8dc246b63648a949bba6d5aed6 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 5.6E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS21200 e4103c8dc246b63648a949bba6d5aed6 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 5.6E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS21200 e4103c8dc246b63648a949bba6d5aed6 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 1.8E-19 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS21200 e4103c8dc246b63648a949bba6d5aed6 301 Pfam PF03466 LysR substrate binding domain 89 294 6.4E-39 T 28-03-2018 IPR005119 LysR, substrate-binding AM393_RS14530 edae719debd6a829ee62ed72741865cd 508 Pfam PF04223 Citrate lyase, alpha subunit (CitF) 40 504 6.2E-247 T 28-03-2018 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 AM393_RS14530 edae719debd6a829ee62ed72741865cd 508 SUPERFAMILY SSF100950 238 504 2.42E-60 T 28-03-2018 AM393_RS14530 edae719debd6a829ee62ed72741865cd 508 Gene3D G3DSA:3.40.1080.10 1 235 4.3E-55 T 28-03-2018 AM393_RS14530 edae719debd6a829ee62ed72741865cd 508 TIGRFAM TIGR01584 citF: citrate lyase, alpha subunit 36 506 2.6E-241 T 28-03-2018 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 AM393_RS14530 edae719debd6a829ee62ed72741865cd 508 Gene3D G3DSA:3.40.1080.10 237 480 7.0E-37 T 28-03-2018 AM393_RS14530 edae719debd6a829ee62ed72741865cd 508 SUPERFAMILY SSF100950 7 234 4.49E-78 T 28-03-2018 AM393_RS14530 edae719debd6a829ee62ed72741865cd 508 PIRSF PIRSF009451 1 506 6.1E-267 T 28-03-2018 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 AM393_RS03310 0d261c43cb0f506dcd896d05f73de5c6 318 Gene3D G3DSA:3.20.20.70 1 316 2.0E-115 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM393_RS03310 0d261c43cb0f506dcd896d05f73de5c6 318 ProSitePatterns PS01054 Transaldolase signature 1. 30 38 - T 28-03-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 AM393_RS03310 0d261c43cb0f506dcd896d05f73de5c6 318 Hamap MF_00492 Transaldolase [tal]. 1 316 52.737 T 28-03-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 AM393_RS03310 0d261c43cb0f506dcd896d05f73de5c6 318 ProSitePatterns PS00958 Transaldolase active site. 128 145 - T 28-03-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 AM393_RS03310 0d261c43cb0f506dcd896d05f73de5c6 318 TIGRFAM TIGR00874 talAB: transaldolase 2 316 9.4E-158 T 28-03-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 AM393_RS03310 0d261c43cb0f506dcd896d05f73de5c6 318 SUPERFAMILY SSF51569 1 315 1.99E-113 T 28-03-2018 AM393_RS03310 0d261c43cb0f506dcd896d05f73de5c6 318 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 13 310 1.3E-99 T 28-03-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 AM393_RS27535 3106c1c967d5c9c119476f331d20f39f 141 Gene3D G3DSA:3.40.30.10 1 141 2.2E-45 T 28-03-2018 AM393_RS27535 3106c1c967d5c9c119476f331d20f39f 141 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 4 116 2.0E-41 T 28-03-2018 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 AM393_RS27535 3106c1c967d5c9c119476f331d20f39f 141 SUPERFAMILY SSF52833 3 137 1.1E-39 T 28-03-2018 IPR012336 Thioredoxin-like fold AM393_RS27535 3106c1c967d5c9c119476f331d20f39f 141 Pfam PF03960 ArsC family 7 114 6.8E-20 T 28-03-2018 IPR006660 Arsenate reductase-like AM393_RS09670 ebb409597d83c843203538069b9b9f0c 329 Pfam PF00535 Glycosyl transferase family 2 8 130 7.3E-24 T 28-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AM393_RS09670 ebb409597d83c843203538069b9b9f0c 329 Gene3D G3DSA:3.90.550.10 2 267 7.2E-44 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM393_RS09670 ebb409597d83c843203538069b9b9f0c 329 SUPERFAMILY SSF53448 5 228 5.16E-46 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM393_RS12520 7ab73d749683a4e87c9438cf96968b63 149 Pfam PF13994 PgaD-like protein 6 132 1.3E-20 T 28-03-2018 IPR023829 Poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD GO:0042710 AM393_RS12520 7ab73d749683a4e87c9438cf96968b63 149 TIGRFAM TIGR03940 PGA_PgaD: poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD 6 134 1.4E-19 T 28-03-2018 IPR023829 Poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD GO:0042710 AM393_RS12520 7ab73d749683a4e87c9438cf96968b63 149 ProDom PD460230 MEMBRANE STORAGE INNER HAEMIN SYSTEM HMSS PGA BIOFILM PGAD TRANSMEMBRANE 6 134 9.0E-17 T 28-03-2018 AM393_RS18890 9734efb97ad4f60544455f51b4f67aab 88 ProDom PD865043 PLASMID SPA-ORF10 3'REGION CYTOPLASMIC ORF-10 SPAS STY1854 40 88 1.0E-5 T 28-03-2018 IPR024753 Regulatory protein AriR GO:0042710|GO:0071229 AM393_RS18890 9734efb97ad4f60544455f51b4f67aab 88 Pfam PF10798 Biofilm development protein YmgB/AriR 30 87 5.3E-23 T 28-03-2018 IPR024753 Regulatory protein AriR GO:0042710|GO:0071229 AM393_RS24550 c70bae96db633506d706e62d2f7de043 380 Pfam PF13353 4Fe-4S single cluster domain 19 102 7.1E-6 T 28-03-2018 AM393_RS24550 c70bae96db633506d706e62d2f7de043 380 TIGRFAM TIGR02109 PQQ_syn_pqqE: coenzyme PQQ biosynthesis enzyme PqqE 7 367 1.0E-190 T 28-03-2018 IPR011843 Coenzyme PQQ biosynthesis protein E, bacteria GO:0018189|GO:0051539 AM393_RS24550 c70bae96db633506d706e62d2f7de043 380 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 18 29 - T 28-03-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 Reactome: R-HSA-947581 AM393_RS24550 c70bae96db633506d706e62d2f7de043 380 Hamap MF_00660 Coenzyme PQQ synthesis protein E [pqqE]. 1 378 191.128 T 28-03-2018 IPR011843 Coenzyme PQQ biosynthesis protein E, bacteria GO:0018189|GO:0051539 AM393_RS24550 c70bae96db633506d706e62d2f7de043 380 Pfam PF13186 Iron-sulfur cluster-binding domain 245 310 2.3E-6 T 28-03-2018 IPR023885 4Fe4S-binding SPASM domain AM393_RS24550 c70bae96db633506d706e62d2f7de043 380 Pfam PF04055 Radical SAM superfamily 18 173 3.3E-22 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AM393_RS24550 c70bae96db633506d706e62d2f7de043 380 PIRSF PIRSF037420 1 359 8.2E-132 T 28-03-2018 AM393_RS24550 c70bae96db633506d706e62d2f7de043 380 Gene3D G3DSA:3.20.20.70 9 354 1.3E-44 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM393_RS24550 c70bae96db633506d706e62d2f7de043 380 SMART SM00729 12 215 5.9E-4 T 28-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AM393_RS24550 c70bae96db633506d706e62d2f7de043 380 SUPERFAMILY SSF102114 9 319 2.35E-74 T 28-03-2018 AM393_RS02985 7119aad37eae7cf361220da5116534e1 404 Gene3D G3DSA:3.40.640.10 51 302 2.8E-58 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM393_RS02985 7119aad37eae7cf361220da5116534e1 404 Pfam PF00155 Aminotransferase class I and II 37 375 7.1E-59 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AM393_RS02985 7119aad37eae7cf361220da5116534e1 404 Gene3D G3DSA:3.90.1150.10 303 398 1.4E-20 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM393_RS02985 7119aad37eae7cf361220da5116534e1 404 SUPERFAMILY SSF53383 10 394 8.2E-107 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM393_RS25870 24a0fbce5181a43627cc7f7f7f85b468 559 Gene3D G3DSA:3.40.50.970 8 199 1.6E-46 T 28-03-2018 AM393_RS25870 24a0fbce5181a43627cc7f7f7f85b468 559 Gene3D G3DSA:3.40.50.970 359 553 1.6E-35 T 28-03-2018 AM393_RS25870 24a0fbce5181a43627cc7f7f7f85b468 559 SUPERFAMILY SSF52518 371 550 8.06E-51 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold AM393_RS25870 24a0fbce5181a43627cc7f7f7f85b468 559 Gene3D G3DSA:3.40.50.1220 200 346 3.3E-32 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AM393_RS25870 24a0fbce5181a43627cc7f7f7f85b468 559 Gene3D G3DSA:1.20.5.740 347 358 1.3E-13 T 28-03-2018 AM393_RS25870 24a0fbce5181a43627cc7f7f7f85b468 559 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 13 176 2.6E-50 T 28-03-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 AM393_RS25870 24a0fbce5181a43627cc7f7f7f85b468 559 TIGRFAM TIGR02418 acolac_catab: acetolactate synthase, catabolic 13 550 3.5E-273 T 28-03-2018 IPR012782 Acetolactate synthase, catabolic GO:0000287|GO:0003984|GO:0030976|GO:0034077 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 AM393_RS25870 24a0fbce5181a43627cc7f7f7f85b468 559 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 393 538 1.2E-38 T 28-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AM393_RS25870 24a0fbce5181a43627cc7f7f7f85b468 559 SUPERFAMILY SSF52518 6 180 5.89E-47 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold AM393_RS25870 24a0fbce5181a43627cc7f7f7f85b468 559 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 430 449 - T 28-03-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 AM393_RS25870 24a0fbce5181a43627cc7f7f7f85b468 559 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 197 331 3.2E-29 T 28-03-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 AM393_RS25870 24a0fbce5181a43627cc7f7f7f85b468 559 SUPERFAMILY SSF52467 190 360 1.68E-39 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AM393_RS09300 c4fe5857c8ff14a050b9afe0e462a4ec 464 Pfam PF13857 Ankyrin repeats (many copies) 42 95 2.5E-8 T 28-03-2018 AM393_RS09300 c4fe5857c8ff14a050b9afe0e462a4ec 464 Gene3D G3DSA:1.25.40.20 142 264 1.4E-15 T 28-03-2018 IPR020683 Ankyrin repeat-containing domain AM393_RS09300 c4fe5857c8ff14a050b9afe0e462a4ec 464 SUPERFAMILY SSF48403 192 359 2.88E-35 T 28-03-2018 IPR020683 Ankyrin repeat-containing domain AM393_RS09300 c4fe5857c8ff14a050b9afe0e462a4ec 464 SMART SM00248 217 247 200.0 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 AM393_RS09300 c4fe5857c8ff14a050b9afe0e462a4ec 464 SMART SM00248 22 51 980.0 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 AM393_RS09300 c4fe5857c8ff14a050b9afe0e462a4ec 464 SMART SM00248 181 213 3000.0 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 AM393_RS09300 c4fe5857c8ff14a050b9afe0e462a4ec 464 SMART SM00248 55 84 0.064 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 AM393_RS09300 c4fe5857c8ff14a050b9afe0e462a4ec 464 SMART SM00248 88 118 2.7 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 AM393_RS09300 c4fe5857c8ff14a050b9afe0e462a4ec 464 SMART SM00248 317 346 0.025 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 AM393_RS09300 c4fe5857c8ff14a050b9afe0e462a4ec 464 SMART SM00248 251 280 2.2 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 AM393_RS09300 c4fe5857c8ff14a050b9afe0e462a4ec 464 SMART SM00248 284 313 2.2 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 AM393_RS09300 c4fe5857c8ff14a050b9afe0e462a4ec 464 Gene3D G3DSA:1.25.40.20 265 404 1.9E-25 T 28-03-2018 IPR020683 Ankyrin repeat-containing domain AM393_RS09300 c4fe5857c8ff14a050b9afe0e462a4ec 464 SUPERFAMILY SSF48403 23 226 8.57E-23 T 28-03-2018 IPR020683 Ankyrin repeat-containing domain AM393_RS09300 c4fe5857c8ff14a050b9afe0e462a4ec 464 Gene3D G3DSA:1.25.40.20 17 136 2.1E-25 T 28-03-2018 IPR020683 Ankyrin repeat-containing domain AM393_RS09300 c4fe5857c8ff14a050b9afe0e462a4ec 464 Pfam PF12796 Ankyrin repeats (3 copies) 195 280 8.3E-8 T 28-03-2018 IPR020683 Ankyrin repeat-containing domain AM393_RS25295 85c456a690105ea99910acc221a00c10 501 ProSitePatterns PS00941 Carboxylesterases type-B signature 2. 84 94 - T 28-03-2018 IPR019819 Carboxylesterase type B, conserved site AM393_RS25295 85c456a690105ea99910acc221a00c10 501 Gene3D G3DSA:3.40.50.1820 2 500 2.2E-118 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AM393_RS25295 85c456a690105ea99910acc221a00c10 501 Pfam PF00135 Carboxylesterase family 353 474 1.4E-11 T 28-03-2018 IPR002018 Carboxylesterase, type B AM393_RS25295 85c456a690105ea99910acc221a00c10 501 Pfam PF00135 Carboxylesterase family 7 328 4.2E-89 T 28-03-2018 IPR002018 Carboxylesterase, type B AM393_RS25295 85c456a690105ea99910acc221a00c10 501 ProSitePatterns PS00122 Carboxylesterases type-B serine active site. 182 197 - T 28-03-2018 IPR019826 Carboxylesterase type B, active site AM393_RS25295 85c456a690105ea99910acc221a00c10 501 PRINTS PR00878 Cholinesterase signature 400 412 6.5E-7 T 28-03-2018 IPR000997 Cholinesterase GO:0004104 Reactome: R-HSA-112311|Reactome: R-HSA-1483191|Reactome: R-HSA-422085 AM393_RS25295 85c456a690105ea99910acc221a00c10 501 PRINTS PR00878 Cholinesterase signature 108 137 6.5E-7 T 28-03-2018 IPR000997 Cholinesterase GO:0004104 Reactome: R-HSA-112311|Reactome: R-HSA-1483191|Reactome: R-HSA-422085 AM393_RS25295 85c456a690105ea99910acc221a00c10 501 SUPERFAMILY SSF53474 6 495 1.67E-112 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AM393_RS23955 2b5b1e3ab3f48302305ab1559963b65b 249 SUPERFAMILY SSF51569 13 227 2.83E-61 T 28-03-2018 AM393_RS23955 2b5b1e3ab3f48302305ab1559963b65b 249 Gene3D G3DSA:3.20.20.70 1 235 2.6E-68 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM393_RS23955 2b5b1e3ab3f48302305ab1559963b65b 249 SMART SM01133 19 235 1.2E-59 T 28-03-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 AM393_RS23955 2b5b1e3ab3f48302305ab1559963b65b 249 PIRSF PIRSF001357 13 242 9.5E-64 T 28-03-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 AM393_RS23955 2b5b1e3ab3f48302305ab1559963b65b 249 Pfam PF01791 DeoC/LacD family aldolase 69 207 1.3E-10 T 28-03-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 AM393_RS23955 2b5b1e3ab3f48302305ab1559963b65b 249 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 20 228 1.0E-54 T 28-03-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 AM393_RS23955 2b5b1e3ab3f48302305ab1559963b65b 249 Hamap MF_00114 Deoxyribose-phosphate aldolase [deoC]. 18 235 25.601 T 28-03-2018 IPR028581 Deoxyribose-phosphate aldolase type I GO:0004139 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180 AM393_RS08880 6781fc712a7bc2a9bafc61405174573b 367 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 254 272 1.1E-67 T 28-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AM393_RS08880 6781fc712a7bc2a9bafc61405174573b 367 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 88 98 1.1E-67 T 28-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AM393_RS08880 6781fc712a7bc2a9bafc61405174573b 367 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 277 290 1.1E-67 T 28-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AM393_RS08880 6781fc712a7bc2a9bafc61405174573b 367 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 26 42 1.1E-67 T 28-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AM393_RS08880 6781fc712a7bc2a9bafc61405174573b 367 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 67 85 1.1E-67 T 28-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AM393_RS08880 6781fc712a7bc2a9bafc61405174573b 367 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 327 342 1.1E-67 T 28-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AM393_RS08880 6781fc712a7bc2a9bafc61405174573b 367 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 48 64 1.1E-67 T 28-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AM393_RS08880 6781fc712a7bc2a9bafc61405174573b 367 Gene3D G3DSA:3.40.50.2300 22 172 3.4E-37 T 28-03-2018 AM393_RS08880 6781fc712a7bc2a9bafc61405174573b 367 Gene3D G3DSA:3.40.50.2300 173 348 2.4E-20 T 28-03-2018 AM393_RS08880 6781fc712a7bc2a9bafc61405174573b 367 SUPERFAMILY SSF53822 24 359 6.06E-90 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AM393_RS08880 6781fc712a7bc2a9bafc61405174573b 367 Pfam PF13458 Periplasmic binding protein 26 346 1.5E-57 T 28-03-2018 IPR028081 Leucine-binding protein domain AM393_RS20270 24b1e060fe7ec45ea45bbed88eb62a61 184 Gene3D G3DSA:3.90.280.10 9 183 1.4E-50 T 28-03-2018 IPR008914 Phosphatidylethanolamine-binding protein AM393_RS20270 24b1e060fe7ec45ea45bbed88eb62a61 184 SUPERFAMILY SSF49777 24 180 7.06E-53 T 28-03-2018 IPR008914 Phosphatidylethanolamine-binding protein AM393_RS20270 24b1e060fe7ec45ea45bbed88eb62a61 184 Pfam PF01161 Phosphatidylethanolamine-binding protein 46 180 3.7E-37 T 28-03-2018 IPR008914 Phosphatidylethanolamine-binding protein AM393_RS20270 24b1e060fe7ec45ea45bbed88eb62a61 184 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 44 181 2.1E-47 T 28-03-2018 IPR005247 YbhB/YbcL AM393_RS01465 a5a8914ce3bac65ebad8dd0246ff75b0 540 SUPERFAMILY SSF53474 123 351 6.4E-25 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AM393_RS01465 a5a8914ce3bac65ebad8dd0246ff75b0 540 Gene3D G3DSA:3.40.50.1820 56 361 4.6E-24 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AM393_RS01465 a5a8914ce3bac65ebad8dd0246ff75b0 540 Pfam PF12146 Serine aminopeptidase, S33 127 250 8.6E-12 T 28-03-2018 IPR022742 Serine aminopeptidase, S33 AM393_RS01555 6c2c7e9804f6e8b02543e542bb1f95df 318 SUPERFAMILY SSF46785 12 118 1.49E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS01555 6c2c7e9804f6e8b02543e542bb1f95df 318 Gene3D G3DSA:3.40.190.10 186 274 1.9E-26 T 28-03-2018 AM393_RS01555 6c2c7e9804f6e8b02543e542bb1f95df 318 Gene3D G3DSA:1.10.10.10 7 87 6.3E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS01555 6c2c7e9804f6e8b02543e542bb1f95df 318 Gene3D G3DSA:3.40.190.10 95 185 7.3E-12 T 28-03-2018 AM393_RS01555 6c2c7e9804f6e8b02543e542bb1f95df 318 Pfam PF03466 LysR substrate binding domain 94 306 2.6E-38 T 28-03-2018 IPR005119 LysR, substrate-binding AM393_RS01555 6c2c7e9804f6e8b02543e542bb1f95df 318 SUPERFAMILY SSF53850 95 309 5.43E-39 T 28-03-2018 AM393_RS01555 6c2c7e9804f6e8b02543e542bb1f95df 318 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 68 1.6E-14 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS23495 a55ef472142c6fa3b15c046fce7e232e 144 Pfam PF01047 MarR family 38 96 7.2E-18 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM393_RS23495 a55ef472142c6fa3b15c046fce7e232e 144 ProSitePatterns PS01117 MarR-type HTH domain signature. 70 104 - T 28-03-2018 IPR023187 Transcriptional regulator MarR-type, conserved site AM393_RS23495 a55ef472142c6fa3b15c046fce7e232e 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 91 107 5.1E-23 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM393_RS23495 a55ef472142c6fa3b15c046fce7e232e 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 72 87 5.1E-23 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM393_RS23495 a55ef472142c6fa3b15c046fce7e232e 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 122 142 5.1E-23 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM393_RS23495 a55ef472142c6fa3b15c046fce7e232e 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 55 71 5.1E-23 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM393_RS23495 a55ef472142c6fa3b15c046fce7e232e 144 SUPERFAMILY SSF46785 5 143 3.52E-30 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS23495 a55ef472142c6fa3b15c046fce7e232e 144 SMART SM00347 31 132 1.1E-30 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM393_RS23495 a55ef472142c6fa3b15c046fce7e232e 144 Gene3D G3DSA:1.10.10.10 7 144 9.0E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS13335 1898e53e5608e6f2c20eaab7c5f8dfed 269 SUPERFAMILY SSF51182 14 249 1.02E-69 T 28-03-2018 IPR011051 RmlC-like cupin domain AM393_RS13335 1898e53e5608e6f2c20eaab7c5f8dfed 269 Gene3D G3DSA:2.60.120.10 13 118 3.3E-38 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AM393_RS13335 1898e53e5608e6f2c20eaab7c5f8dfed 269 PIRSF PIRSF036628 1 266 2.7E-110 T 28-03-2018 IPR024203 5-deoxy-glucuronate isomerase, IolB GO:0008880|GO:0019310 KEGG: 00562+5.3.1.30 AM393_RS13335 1898e53e5608e6f2c20eaab7c5f8dfed 269 Gene3D G3DSA:2.60.120.10 119 265 5.2E-58 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AM393_RS13335 1898e53e5608e6f2c20eaab7c5f8dfed 269 TIGRFAM TIGR04378 myo_inos_iolB: 5-deoxy-glucuronate isomerase 14 260 1.1E-100 T 28-03-2018 IPR024203 5-deoxy-glucuronate isomerase, IolB GO:0008880|GO:0019310 KEGG: 00562+5.3.1.30 AM393_RS13335 1898e53e5608e6f2c20eaab7c5f8dfed 269 Pfam PF04962 KduI/IolB family 5 260 2.7E-110 T 28-03-2018 IPR021120 KduI/IolB isomerase GO:0016861 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 AM393_RS16630 908825a6842c5803360b8f04d43eef1d 283 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 102 276 1.7E-19 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS16630 908825a6842c5803360b8f04d43eef1d 283 SUPERFAMILY SSF161098 9 283 6.54E-69 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS16630 908825a6842c5803360b8f04d43eef1d 283 Gene3D G3DSA:1.10.3720.10 4 270 7.9E-45 T 28-03-2018 AM393_RS15190 5f2fa04d9bbf6dffe0b26fd31ee14d4f 497 TIGRFAM TIGR02533 type_II_gspE: type II secretion system protein E 11 489 2.7E-206 T 28-03-2018 IPR013369 Type II secretion system GspE GO:0005524|GO:0008565|GO:0015627|GO:0015628 AM393_RS15190 5f2fa04d9bbf6dffe0b26fd31ee14d4f 497 SUPERFAMILY SSF52540 103 489 1.18E-102 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS15190 5f2fa04d9bbf6dffe0b26fd31ee14d4f 497 SUPERFAMILY SSF160246 9 73 2.59E-12 T 28-03-2018 AM393_RS15190 5f2fa04d9bbf6dffe0b26fd31ee14d4f 497 Gene3D G3DSA:3.30.450.90 84 219 1.1E-48 T 28-03-2018 AM393_RS15190 5f2fa04d9bbf6dffe0b26fd31ee14d4f 497 SMART SM00382 247 370 7.1E-5 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS15190 5f2fa04d9bbf6dffe0b26fd31ee14d4f 497 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 314 328 - T 28-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 AM393_RS15190 5f2fa04d9bbf6dffe0b26fd31ee14d4f 497 Pfam PF00437 Type II/IV secretion system protein 120 386 1.0E-91 T 28-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 AM393_RS15190 5f2fa04d9bbf6dffe0b26fd31ee14d4f 497 Gene3D G3DSA:3.40.50.300 220 496 1.5E-62 T 28-03-2018 AM393_RS27105 ec24f6548270a49a6a8b3c4f021ac590 106 Gene3D G3DSA:3.30.2310.20 1 84 1.1E-6 T 28-03-2018 AM393_RS27105 ec24f6548270a49a6a8b3c4f021ac590 106 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 12 100 8.3E-23 T 28-03-2018 IPR009241 Toxin HigB-like AM393_RS27105 ec24f6548270a49a6a8b3c4f021ac590 106 SUPERFAMILY SSF143011 1 55 1.63E-6 T 28-03-2018 IPR035095 Toxin RelE-like domain AM393_RS01045 99ff4524df9242c15859ab91fa2ce712 245 SUPERFAMILY SSF52540 3 223 3.48E-49 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS01045 99ff4524df9242c15859ab91fa2ce712 245 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS01045 99ff4524df9242c15859ab91fa2ce712 245 Gene3D G3DSA:3.40.50.300 1 243 1.6E-48 T 28-03-2018 AM393_RS01045 99ff4524df9242c15859ab91fa2ce712 245 SMART SM00382 30 209 9.6E-15 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS01045 99ff4524df9242c15859ab91fa2ce712 245 Pfam PF00005 ABC transporter 22 161 1.6E-25 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS25565 e6509cd5ac2d8dc00ca93698d5f0328d 393 SUPERFAMILY SSF103473 8 376 1.44E-58 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS25565 e6509cd5ac2d8dc00ca93698d5f0328d 393 Pfam PF07690 Major Facilitator Superfamily 15 340 1.8E-42 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS25565 e6509cd5ac2d8dc00ca93698d5f0328d 393 Gene3D G3DSA:1.20.1250.20 6 187 2.0E-29 T 28-03-2018 AM393_RS25565 e6509cd5ac2d8dc00ca93698d5f0328d 393 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 5 372 2.4E-121 T 28-03-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 AM393_RS25565 e6509cd5ac2d8dc00ca93698d5f0328d 393 Gene3D G3DSA:1.20.1250.20 191 384 2.9E-12 T 28-03-2018 AM393_RS09235 1fe91d18f43b40c9dc7c77cdebc0b10b 703 Pfam PF03552 Cellulose synthase 302 432 1.9E-7 T 28-03-2018 IPR005150 Cellulose synthase GO:0016020|GO:0016760|GO:0030244 AM393_RS09235 1fe91d18f43b40c9dc7c77cdebc0b10b 703 SUPERFAMILY SSF53448 108 405 1.85E-46 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM393_RS09235 1fe91d18f43b40c9dc7c77cdebc0b10b 703 Pfam PF00535 Glycosyl transferase family 2 130 300 4.5E-33 T 28-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AM393_RS09235 1fe91d18f43b40c9dc7c77cdebc0b10b 703 TIGRFAM TIGR03030 CelA: cellulose synthase catalytic subunit (UDP-forming) 2 674 1.2E-253 T 28-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 AM393_RS09235 1fe91d18f43b40c9dc7c77cdebc0b10b 703 SUPERFAMILY SSF141371 552 631 1.82E-7 T 28-03-2018 AM393_RS09235 1fe91d18f43b40c9dc7c77cdebc0b10b 703 Gene3D G3DSA:3.90.550.10 127 364 5.7E-48 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM393_RS09235 1fe91d18f43b40c9dc7c77cdebc0b10b 703 Gene3D G3DSA:2.40.10.220 547 654 7.1E-12 T 28-03-2018 AM393_RS09235 1fe91d18f43b40c9dc7c77cdebc0b10b 703 PRINTS PR01439 Cellulose synthase subunit A signature 81 106 1.1E-57 T 28-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 AM393_RS09235 1fe91d18f43b40c9dc7c77cdebc0b10b 703 PRINTS PR01439 Cellulose synthase subunit A signature 447 466 1.1E-57 T 28-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 AM393_RS09235 1fe91d18f43b40c9dc7c77cdebc0b10b 703 PRINTS PR01439 Cellulose synthase subunit A signature 378 404 1.1E-57 T 28-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 AM393_RS09235 1fe91d18f43b40c9dc7c77cdebc0b10b 703 PRINTS PR01439 Cellulose synthase subunit A signature 523 544 1.1E-57 T 28-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 AM393_RS09235 1fe91d18f43b40c9dc7c77cdebc0b10b 703 PRINTS PR01439 Cellulose synthase subunit A signature 217 241 1.1E-57 T 28-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 AM393_RS09235 1fe91d18f43b40c9dc7c77cdebc0b10b 703 PRINTS PR01439 Cellulose synthase subunit A signature 136 155 1.1E-57 T 28-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 AM393_RS09235 1fe91d18f43b40c9dc7c77cdebc0b10b 703 PRINTS PR01439 Cellulose synthase subunit A signature 53 73 1.1E-57 T 28-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 AM393_RS09235 1fe91d18f43b40c9dc7c77cdebc0b10b 703 PRINTS PR01439 Cellulose synthase subunit A signature 407 426 1.1E-57 T 28-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 AM393_RS09235 1fe91d18f43b40c9dc7c77cdebc0b10b 703 PRINTS PR01439 Cellulose synthase subunit A signature 487 511 1.1E-57 T 28-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 AM393_RS09235 1fe91d18f43b40c9dc7c77cdebc0b10b 703 Pfam PF07238 PilZ domain 550 645 1.9E-8 T 28-03-2018 IPR009875 PilZ domain GO:0035438 AM393_RS17600 490b27abf8b807ec2b8c0311aa205f82 413 SUPERFAMILY SSF103473 16 410 4.05E-35 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS17600 490b27abf8b807ec2b8c0311aa205f82 413 Pfam PF03825 Nucleoside H+ symporter 21 409 7.3E-97 T 28-03-2018 AM393_RS17600 490b27abf8b807ec2b8c0311aa205f82 413 Gene3D G3DSA:1.20.1250.20 207 412 7.0E-22 T 28-03-2018 AM393_RS17600 490b27abf8b807ec2b8c0311aa205f82 413 Gene3D G3DSA:1.20.1250.20 7 201 3.6E-11 T 28-03-2018 AM393_RS18225 413a0f7572e9c0012a50576adc19ec97 187 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 156 181 1.8E-6 T 28-03-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AM393_RS18225 413a0f7572e9c0012a50576adc19ec97 187 TIGRFAM TIGR03137 AhpC: peroxiredoxin 1 187 1.2E-103 T 28-03-2018 IPR017559 Alkyl hydroperoxide reductase subunit C GO:0006979|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AM393_RS18225 413a0f7572e9c0012a50576adc19ec97 187 Gene3D G3DSA:3.30.1020.10 154 183 1.6E-9 T 28-03-2018 AM393_RS18225 413a0f7572e9c0012a50576adc19ec97 187 SUPERFAMILY SSF52833 1 186 1.71E-53 T 28-03-2018 IPR012336 Thioredoxin-like fold AM393_RS18225 413a0f7572e9c0012a50576adc19ec97 187 Gene3D G3DSA:3.40.30.10 5 153 8.7E-32 T 28-03-2018 AM393_RS18225 413a0f7572e9c0012a50576adc19ec97 187 Pfam PF00578 AhpC/TSA family 10 133 1.5E-32 T 28-03-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AM393_RS18225 413a0f7572e9c0012a50576adc19ec97 187 PIRSF PIRSF000239 1 187 3.6E-50 T 28-03-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AM393_RS24830 3557c3c30c29832570a58a122fa51b0c 384 Gene3D G3DSA:1.20.1250.20 189 382 8.3E-15 T 28-03-2018 AM393_RS24830 3557c3c30c29832570a58a122fa51b0c 384 Pfam PF07690 Major Facilitator Superfamily 8 328 2.7E-34 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS24830 3557c3c30c29832570a58a122fa51b0c 384 Gene3D G3DSA:1.20.1250.20 1 188 2.1E-28 T 28-03-2018 AM393_RS24830 3557c3c30c29832570a58a122fa51b0c 384 SUPERFAMILY SSF103473 3 380 2.75E-50 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS20000 bb4c7984d4573ee0bb46e342574f154b 582 Pfam PF00664 ABC transporter transmembrane region 27 297 1.5E-60 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AM393_RS20000 bb4c7984d4573ee0bb46e342574f154b 582 Pfam PF00005 ABC transporter 359 509 2.9E-36 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS20000 bb4c7984d4573ee0bb46e342574f154b 582 ProSitePatterns PS00211 ABC transporters family signature. 481 495 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS20000 bb4c7984d4573ee0bb46e342574f154b 582 Gene3D G3DSA:1.20.1560.10 1 328 6.0E-68 T 28-03-2018 AM393_RS20000 bb4c7984d4573ee0bb46e342574f154b 582 Gene3D G3DSA:3.40.50.300 329 582 9.7E-81 T 28-03-2018 AM393_RS20000 bb4c7984d4573ee0bb46e342574f154b 582 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 12 582 3.1E-271 T 28-03-2018 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 AM393_RS20000 bb4c7984d4573ee0bb46e342574f154b 582 SUPERFAMILY SSF52540 331 580 4.39E-97 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS20000 bb4c7984d4573ee0bb46e342574f154b 582 SUPERFAMILY SSF90123 14 325 1.7E-75 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AM393_RS20000 bb4c7984d4573ee0bb46e342574f154b 582 SMART SM00382 368 555 4.1E-18 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS03670 f7c7be7b5ba18e220a134aa021d1080d 478 PRINTS PR00171 Sugar transporter signature 108 127 3.5E-20 T 28-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 AM393_RS03670 f7c7be7b5ba18e220a134aa021d1080d 478 PRINTS PR00171 Sugar transporter signature 24 34 3.5E-20 T 28-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 AM393_RS03670 f7c7be7b5ba18e220a134aa021d1080d 478 PRINTS PR00171 Sugar transporter signature 278 288 3.5E-20 T 28-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 AM393_RS03670 f7c7be7b5ba18e220a134aa021d1080d 478 PRINTS PR00171 Sugar transporter signature 363 384 3.5E-20 T 28-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 AM393_RS03670 f7c7be7b5ba18e220a134aa021d1080d 478 PRINTS PR00171 Sugar transporter signature 386 398 3.5E-20 T 28-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 AM393_RS03670 f7c7be7b5ba18e220a134aa021d1080d 478 TIGRFAM TIGR00879 SP: MFS transporter, sugar porter (SP) family 5 457 2.8E-108 T 28-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 AM393_RS03670 f7c7be7b5ba18e220a134aa021d1080d 478 ProSitePatterns PS00217 Sugar transport proteins signature 2. 113 138 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM393_RS03670 f7c7be7b5ba18e220a134aa021d1080d 478 Gene3D G3DSA:1.20.1250.20 2 224 3.0E-37 T 28-03-2018 AM393_RS03670 f7c7be7b5ba18e220a134aa021d1080d 478 Gene3D G3DSA:1.20.1250.20 241 475 3.9E-33 T 28-03-2018 AM393_RS03670 f7c7be7b5ba18e220a134aa021d1080d 478 ProSitePatterns PS00216 Sugar transport proteins signature 1. 71 88 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM393_RS03670 f7c7be7b5ba18e220a134aa021d1080d 478 SUPERFAMILY SSF103473 8 460 1.44E-72 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS03670 f7c7be7b5ba18e220a134aa021d1080d 478 ProSitePatterns PS00216 Sugar transport proteins signature 1. 322 339 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM393_RS03670 f7c7be7b5ba18e220a134aa021d1080d 478 Pfam PF00083 Sugar (and other) transporter 16 460 2.2E-111 T 28-03-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 AM393_RS04850 d01c5072f6901e9de28889cc844ae448 302 Hamap MF_00064 Sulfate adenylyltransferase subunit 2 [cysD]. 4 302 59.592 T 28-03-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 AM393_RS04850 d01c5072f6901e9de28889cc844ae448 302 Gene3D G3DSA:3.40.50.620 2 300 4.7E-42 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM393_RS04850 d01c5072f6901e9de28889cc844ae448 302 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 29 257 3.0E-66 T 28-03-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 Reactome: R-HSA-196843 AM393_RS04850 d01c5072f6901e9de28889cc844ae448 302 PIRSF PIRSF002936 1 302 2.3E-156 T 28-03-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 AM393_RS04850 d01c5072f6901e9de28889cc844ae448 302 SUPERFAMILY SSF52402 6 209 7.72E-76 T 28-03-2018 AM393_RS04850 d01c5072f6901e9de28889cc844ae448 302 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 9 302 7.5E-169 T 28-03-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 AM393_RS04870 0c076cee29ba4b1b01f863a49df2d12f 570 TIGRFAM TIGR02041 CysI: sulfite reductase (NADPH) hemoprotein, beta-component 19 558 4.8E-299 T 28-03-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM393_RS04870 0c076cee29ba4b1b01f863a49df2d12f 570 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 477 493 - T 28-03-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM393_RS04870 0c076cee29ba4b1b01f863a49df2d12f 570 Gene3D G3DSA:3.30.413.10 141 345 5.4E-46 T 28-03-2018 AM393_RS04870 0c076cee29ba4b1b01f863a49df2d12f 570 Hamap MF_01540 Sulfite reductase [NADPH] hemoprotein beta-component [cysI]. 10 570 58.667 T 28-03-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM393_RS04870 0c076cee29ba4b1b01f863a49df2d12f 570 SUPERFAMILY SSF55124 13 142 2.94E-25 T 28-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM393_RS04870 0c076cee29ba4b1b01f863a49df2d12f 570 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 81 138 1.3E-12 T 28-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM393_RS04870 0c076cee29ba4b1b01f863a49df2d12f 570 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 353 416 5.7E-13 T 28-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM393_RS04870 0c076cee29ba4b1b01f863a49df2d12f 570 SUPERFAMILY SSF56014 428 559 1.7E-35 T 28-03-2018 AM393_RS04870 0c076cee29ba4b1b01f863a49df2d12f 570 Gene3D G3DSA:3.30.413.10 425 560 1.0E-24 T 28-03-2018 AM393_RS04870 0c076cee29ba4b1b01f863a49df2d12f 570 PRINTS PR00397 Sirohaem Fe-binding site signature 429 447 1.5E-8 T 28-03-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM393_RS04870 0c076cee29ba4b1b01f863a49df2d12f 570 PRINTS PR00397 Sirohaem Fe-binding site signature 477 495 1.5E-8 T 28-03-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM393_RS04870 0c076cee29ba4b1b01f863a49df2d12f 570 SUPERFAMILY SSF56014 150 344 2.09E-61 T 28-03-2018 AM393_RS04870 0c076cee29ba4b1b01f863a49df2d12f 570 SUPERFAMILY SSF55124 346 422 3.92E-21 T 28-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM393_RS04870 0c076cee29ba4b1b01f863a49df2d12f 570 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 430 548 0.056 T 28-03-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM393_RS04870 0c076cee29ba4b1b01f863a49df2d12f 570 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 173 331 1.9E-47 T 28-03-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM393_RS05180 0332cb1b15d4e236a5b3641c9dd5beec 261 Pfam PF02571 Precorrin-6x reductase CbiJ/CobK 6 245 4.8E-72 T 28-03-2018 IPR003723 Precorrin-6x reductase GO:0009236|GO:0016994|GO:0055114 AM393_RS05180 0332cb1b15d4e236a5b3641c9dd5beec 261 Gene3D G3DSA:3.40.50.2300 70 259 8.9E-11 T 28-03-2018 AM393_RS05180 0332cb1b15d4e236a5b3641c9dd5beec 261 TIGRFAM TIGR00715 precor6x_red: precorrin-6x reductase 5 235 6.4E-51 T 28-03-2018 IPR003723 Precorrin-6x reductase GO:0009236|GO:0016994|GO:0055114 AM393_RS16820 555a3f700e2f82ae24a2e48f5fbe15c6 305 ProSitePatterns PS01270 Band 7 protein family signature. 132 160 - T 28-03-2018 IPR018080 Band 7/stomatin-like, conserved site AM393_RS16820 555a3f700e2f82ae24a2e48f5fbe15c6 305 SUPERFAMILY SSF117892 49 183 2.75E-41 T 28-03-2018 IPR001107 Band 7 domain AM393_RS16820 555a3f700e2f82ae24a2e48f5fbe15c6 305 Pfam PF01145 SPFH domain / Band 7 family 22 203 4.5E-34 T 28-03-2018 IPR001107 Band 7 domain AM393_RS16820 555a3f700e2f82ae24a2e48f5fbe15c6 305 PRINTS PR00721 Stomatin signature 128 151 6.7E-27 T 28-03-2018 IPR001972 Stomatin family GO:0016020 AM393_RS16820 555a3f700e2f82ae24a2e48f5fbe15c6 305 PRINTS PR00721 Stomatin signature 152 170 6.7E-27 T 28-03-2018 IPR001972 Stomatin family GO:0016020 AM393_RS16820 555a3f700e2f82ae24a2e48f5fbe15c6 305 PRINTS PR00721 Stomatin signature 73 94 6.7E-27 T 28-03-2018 IPR001972 Stomatin family GO:0016020 AM393_RS16820 555a3f700e2f82ae24a2e48f5fbe15c6 305 PRINTS PR00721 Stomatin signature 108 125 6.7E-27 T 28-03-2018 IPR001972 Stomatin family GO:0016020 AM393_RS16820 555a3f700e2f82ae24a2e48f5fbe15c6 305 PRINTS PR00721 Stomatin signature 171 192 6.7E-27 T 28-03-2018 IPR001972 Stomatin family GO:0016020 AM393_RS16820 555a3f700e2f82ae24a2e48f5fbe15c6 305 SMART SM00244 18 176 1.8E-59 T 28-03-2018 IPR001107 Band 7 domain AM393_RS22905 b074faedbc7f9e3124f121ea50b392fa 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 350 364 1.1E-13 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM393_RS22905 b074faedbc7f9e3124f121ea50b392fa 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 422 1.1E-13 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM393_RS22905 b074faedbc7f9e3124f121ea50b392fa 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 368 378 1.1E-13 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM393_RS22905 b074faedbc7f9e3124f121ea50b392fa 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 403 1.1E-13 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM393_RS22905 b074faedbc7f9e3124f121ea50b392fa 433 SMART SM00388 211 271 1.6E-8 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM393_RS22905 b074faedbc7f9e3124f121ea50b392fa 433 Gene3D G3DSA:1.10.287.130 201 254 1.0E-9 T 28-03-2018 AM393_RS22905 b074faedbc7f9e3124f121ea50b392fa 433 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 320 422 7.4E-21 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS22905 b074faedbc7f9e3124f121ea50b392fa 433 Gene3D G3DSA:3.30.565.10 255 425 4.1E-32 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS22905 b074faedbc7f9e3124f121ea50b392fa 433 SUPERFAMILY SSF55874 261 423 5.63E-38 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS22905 b074faedbc7f9e3124f121ea50b392fa 433 SUPERFAMILY SSF47384 194 271 2.55E-12 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM393_RS22905 b074faedbc7f9e3124f121ea50b392fa 433 Pfam PF00512 His Kinase A (phospho-acceptor) domain 211 270 1.1E-7 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM393_RS22905 b074faedbc7f9e3124f121ea50b392fa 433 SMART SM00387 315 425 3.2E-35 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS22905 b074faedbc7f9e3124f121ea50b392fa 433 SMART SM00304 158 210 2.6E-5 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM393_RS26280 0ece8ff9b506b69a6c086a225f80b205 328 Pfam PF03734 L,D-transpeptidase catalytic domain 98 233 7.0E-20 T 28-03-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 AM393_RS26280 0ece8ff9b506b69a6c086a225f80b205 328 Pfam PF01476 LysM domain 43 86 3.1E-6 T 28-03-2018 IPR018392 LysM domain AM393_RS26280 0ece8ff9b506b69a6c086a225f80b205 328 Gene3D G3DSA:3.10.350.10 39 88 6.1E-7 T 28-03-2018 AM393_RS26280 0ece8ff9b506b69a6c086a225f80b205 328 SUPERFAMILY SSF141523 95 233 1.96E-29 T 28-03-2018 AM393_RS26280 0ece8ff9b506b69a6c086a225f80b205 328 Gene3D G3DSA:2.40.440.10 93 235 9.6E-31 T 28-03-2018 AM393_RS07450 cc488759516cbd0af8cf4e3eaed4b4dc 643 Gene3D G3DSA:3.40.50.300 226 408 3.3E-43 T 28-03-2018 AM393_RS07450 cc488759516cbd0af8cf4e3eaed4b4dc 643 Pfam PF00270 DEAD/DEAH box helicase 31 195 5.2E-51 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AM393_RS07450 cc488759516cbd0af8cf4e3eaed4b4dc 643 Pfam PF12343 Cold shock protein DEAD box A 574 643 4.3E-14 T 28-03-2018 IPR021046 Cold-shock protein, DEAD box A, C-terminal GO:0016817 AM393_RS07450 cc488759516cbd0af8cf4e3eaed4b4dc 643 Pfam PF03880 DbpA RNA binding domain 491 560 2.5E-20 T 28-03-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain AM393_RS07450 cc488759516cbd0af8cf4e3eaed4b4dc 643 SMART SM00487 25 223 1.6E-64 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AM393_RS07450 cc488759516cbd0af8cf4e3eaed4b4dc 643 Pfam PF00271 Helicase conserved C-terminal domain 232 340 4.1E-29 T 28-03-2018 IPR001650 Helicase, C-terminal AM393_RS07450 cc488759516cbd0af8cf4e3eaed4b4dc 643 SMART SM00490 259 340 4.8E-32 T 28-03-2018 IPR001650 Helicase, C-terminal AM393_RS07450 cc488759516cbd0af8cf4e3eaed4b4dc 643 Hamap MF_00964 ATP-dependent RNA helicase DeaD [deaD]. 1 562 47.243 T 28-03-2018 IPR028618 ATP-dependent RNA helicase DeaD GO:0000027|GO:0004004|GO:0070417 AM393_RS07450 cc488759516cbd0af8cf4e3eaed4b4dc 643 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 28-03-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AM393_RS07450 cc488759516cbd0af8cf4e3eaed4b4dc 643 SUPERFAMILY SSF52540 75 361 8.22E-73 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS07450 cc488759516cbd0af8cf4e3eaed4b4dc 643 Gene3D G3DSA:3.40.50.300 2 225 3.5E-60 T 28-03-2018 AM393_RS26665 8073262abfad377f3edbcd486b579163 156 Hamap MF_00612 UPF0225 protein YchJ [ychJ]. 5 132 29.08 T 28-03-2018 IPR023006 Uncharacterised protein family UPF0225 AM393_RS26665 8073262abfad377f3edbcd486b579163 156 Gene3D G3DSA:3.10.450.50 140 156 0.11 T 28-03-2018 AM393_RS26665 8073262abfad377f3edbcd486b579163 156 Gene3D G3DSA:3.10.450.50 7 134 3.7E-43 T 28-03-2018 AM393_RS26665 8073262abfad377f3edbcd486b579163 156 Pfam PF02810 SEC-C motif 138 156 6.1E-11 T 28-03-2018 IPR004027 SEC-C motif AM393_RS26665 8073262abfad377f3edbcd486b579163 156 Pfam PF02810 SEC-C motif 7 23 3.5E-5 T 28-03-2018 IPR004027 SEC-C motif AM393_RS26665 8073262abfad377f3edbcd486b579163 156 SUPERFAMILY SSF103642 136 155 3.27E-8 T 28-03-2018 AM393_RS26665 8073262abfad377f3edbcd486b579163 156 SUPERFAMILY SSF54427 30 133 1.8E-36 T 28-03-2018 IPR032710 NTF2-like domain AM393_RS16265 ba0afc574a8236ab9d21ca0fcc841037 615 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 3 615 50.726 T 28-03-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 AM393_RS16265 ba0afc574a8236ab9d21ca0fcc841037 615 Gene3D G3DSA:1.20.1640.10 390 609 8.5E-30 T 28-03-2018 AM393_RS16265 ba0afc574a8236ab9d21ca0fcc841037 615 Pfam PF02355 Protein export membrane protein 433 601 4.7E-15 T 28-03-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial AM393_RS16265 ba0afc574a8236ab9d21ca0fcc841037 615 SUPERFAMILY SSF82866 410 606 1.7E-39 T 28-03-2018 AM393_RS16265 ba0afc574a8236ab9d21ca0fcc841037 615 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 123 601 5.3E-152 T 28-03-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 AM393_RS16265 ba0afc574a8236ab9d21ca0fcc841037 615 Pfam PF07549 SecD/SecF GG Motif 120 140 4.9E-6 T 28-03-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site AM393_RS16265 ba0afc574a8236ab9d21ca0fcc841037 615 Pfam PF13721 SecD export protein N-terminal TM region 2 103 2.7E-38 T 28-03-2018 IPR027398 SecD export protein N-terminal TM domain AM393_RS16265 ba0afc574a8236ab9d21ca0fcc841037 615 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 345 594 2.3E-84 T 28-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AM393_RS14820 f7ffc44a1df897c8d69b92f12c77f161 588 SUPERFAMILY SSF56519 63 233 2.49E-47 T 28-03-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 AM393_RS14820 f7ffc44a1df897c8d69b92f12c77f161 588 Pfam PF00905 Penicillin binding protein transpeptidase domain 260 554 1.6E-84 T 28-03-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AM393_RS14820 f7ffc44a1df897c8d69b92f12c77f161 588 Pfam PF03717 Penicillin-binding Protein dimerisation domain 70 220 8.1E-22 T 28-03-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 AM393_RS14820 f7ffc44a1df897c8d69b92f12c77f161 588 SUPERFAMILY SSF56601 235 563 6.76E-88 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AM393_RS14820 f7ffc44a1df897c8d69b92f12c77f161 588 Gene3D G3DSA:3.40.710.10 236 585 3.0E-79 T 28-03-2018 AM393_RS14820 f7ffc44a1df897c8d69b92f12c77f161 588 Gene3D G3DSA:3.90.1310.10 36 235 2.7E-44 T 28-03-2018 AM393_RS06565 9189245e076ae455e5c11f04d3333e21 455 SUPERFAMILY SSF52540 182 253 1.25E-47 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS06565 9189245e076ae455e5c11f04d3333e21 455 SUPERFAMILY SSF52540 282 432 1.25E-47 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS06565 9189245e076ae455e5c11f04d3333e21 455 Gene3D G3DSA:3.40.50.300 166 447 3.9E-65 T 28-03-2018 AM393_RS06565 9189245e076ae455e5c11f04d3333e21 455 Pfam PF00772 DnaB-like helicase N terminal domain 9 109 1.6E-35 T 28-03-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 AM393_RS06565 9189245e076ae455e5c11f04d3333e21 455 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 8 441 1.1E-151 T 28-03-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 AM393_RS06565 9189245e076ae455e5c11f04d3333e21 455 SMART SM00382 201 400 0.0089 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS06565 9189245e076ae455e5c11f04d3333e21 455 Pfam PF03796 DnaB-like helicase C terminal domain 184 440 2.1E-93 T 28-03-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 AM393_RS06565 9189245e076ae455e5c11f04d3333e21 455 Gene3D G3DSA:1.10.860.10 1 150 2.0E-42 T 28-03-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal AM393_RS06565 9189245e076ae455e5c11f04d3333e21 455 SUPERFAMILY SSF48024 9 117 2.48E-36 T 28-03-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 AM393_RS19175 3fb27690aad6d1608f578686f3c11931 86 SUPERFAMILY SSF159871 3 86 6.15E-25 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 AM393_RS19175 3fb27690aad6d1608f578686f3c11931 86 Gene3D G3DSA:3.30.1660.10 22 86 3.3E-22 T 28-03-2018 IPR025543 Dodecin-like AM393_RS19175 3fb27690aad6d1608f578686f3c11931 86 Pfam PF07338 Protein of unknown function (DUF1471) 34 86 4.9E-17 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 AM393_RS02035 7ec200be80fdc3b23abb56ac3f632b4a 562 SUPERFAMILY SSF55781 243 359 1.41E-9 T 28-03-2018 IPR029016 GAF domain-like AM393_RS02035 7ec200be80fdc3b23abb56ac3f632b4a 562 Pfam PF07694 5TMR of 5TMR-LYT 28 196 1.5E-58 T 28-03-2018 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 AM393_RS02035 7ec200be80fdc3b23abb56ac3f632b4a 562 Pfam PF06580 Histidine kinase 371 446 6.9E-24 T 28-03-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 AM393_RS02035 7ec200be80fdc3b23abb56ac3f632b4a 562 SMART SM00065 218 365 6.5E-12 T 28-03-2018 IPR003018 GAF domain GO:0005515 AM393_RS02035 7ec200be80fdc3b23abb56ac3f632b4a 562 Gene3D G3DSA:3.30.450.40 216 395 1.4E-8 T 28-03-2018 IPR029016 GAF domain-like AM393_RS02035 7ec200be80fdc3b23abb56ac3f632b4a 562 Gene3D G3DSA:3.30.565.10 396 558 2.3E-18 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS02035 7ec200be80fdc3b23abb56ac3f632b4a 562 SUPERFAMILY SSF55874 424 557 1.64E-13 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS02035 7ec200be80fdc3b23abb56ac3f632b4a 562 Pfam PF13185 GAF domain 239 352 4.9E-8 T 28-03-2018 IPR003018 GAF domain GO:0005515 AM393_RS04060 4a7951ded64dc69d3f5037d82d42506b 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 1.8E-17 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS04060 4a7951ded64dc69d3f5037d82d42506b 294 Pfam PF03466 LysR substrate binding domain 89 292 7.6E-45 T 28-03-2018 IPR005119 LysR, substrate-binding AM393_RS04060 4a7951ded64dc69d3f5037d82d42506b 294 Gene3D G3DSA:3.40.190.10 90 176 1.5E-9 T 28-03-2018 AM393_RS04060 4a7951ded64dc69d3f5037d82d42506b 294 Gene3D G3DSA:3.40.190.10 177 264 4.8E-27 T 28-03-2018 AM393_RS04060 4a7951ded64dc69d3f5037d82d42506b 294 Gene3D G3DSA:1.10.10.10 3 84 6.9E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS04060 4a7951ded64dc69d3f5037d82d42506b 294 SUPERFAMILY SSF53850 90 293 5.07E-47 T 28-03-2018 AM393_RS04060 4a7951ded64dc69d3f5037d82d42506b 294 SUPERFAMILY SSF46785 4 112 2.05E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS13505 39ffd70a38718d70fd82bde36ce47737 777 SUPERFAMILY SSF52540 431 620 3.8E-18 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS13505 39ffd70a38718d70fd82bde36ce47737 777 SMART SM00778 30 66 1.7E-19 T 28-03-2018 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal GO:0003896|GO:0004386|GO:0008270 AM393_RS13505 39ffd70a38718d70fd82bde36ce47737 777 SUPERFAMILY SSF57783 15 93 6.38E-9 T 28-03-2018 AM393_RS13505 39ffd70a38718d70fd82bde36ce47737 777 Pfam PF08706 D5 N terminal like 389 467 1.2E-6 T 28-03-2018 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal AM393_RS13505 39ffd70a38718d70fd82bde36ce47737 777 Gene3D G3DSA:3.40.50.300 451 648 4.0E-13 T 28-03-2018 AM393_RS13505 39ffd70a38718d70fd82bde36ce47737 777 SMART SM00885 336 463 1.9E-16 T 28-03-2018 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal AM393_RS13505 39ffd70a38718d70fd82bde36ce47737 777 SUPERFAMILY SSF46785 671 769 6.8E-40 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS13505 39ffd70a38718d70fd82bde36ce47737 777 SMART SM00493 208 283 1.9E-5 T 28-03-2018 IPR006171 TOPRIM domain AM393_RS13505 39ffd70a38718d70fd82bde36ce47737 777 Pfam PF13362 Toprim domain 210 300 1.6E-11 T 28-03-2018 IPR006171 TOPRIM domain AM393_RS13505 39ffd70a38718d70fd82bde36ce47737 777 Gene3D G3DSA:3.40.1360.10 196 314 1.9E-14 T 28-03-2018 AM393_RS13505 39ffd70a38718d70fd82bde36ce47737 777 Gene3D G3DSA:3.90.580.10 7 93 1.2E-10 T 28-03-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 AM393_RS13505 39ffd70a38718d70fd82bde36ce47737 777 Gene3D G3DSA:1.10.10.10 672 768 2.3E-37 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS13505 39ffd70a38718d70fd82bde36ce47737 777 Pfam PF03288 Poxvirus D5 protein-like 670 769 1.4E-21 T 28-03-2018 IPR004968 DNA primase/nucleoside triphosphatase, C-terminal AM393_RS13505 39ffd70a38718d70fd82bde36ce47737 777 Pfam PF08273 Zinc-binding domain of primase-helicase 31 66 1.3E-18 T 28-03-2018 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal GO:0003896|GO:0004386|GO:0008270 AM393_RS09030 f4df53936c000dbeb2b006e726dbdf37 254 Pfam PF00005 ABC transporter 20 168 6.9E-22 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS09030 f4df53936c000dbeb2b006e726dbdf37 254 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS09030 f4df53936c000dbeb2b006e726dbdf37 254 SUPERFAMILY SSF52540 14 241 5.23E-49 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS09030 f4df53936c000dbeb2b006e726dbdf37 254 SMART SM00382 28 218 1.0E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS09030 f4df53936c000dbeb2b006e726dbdf37 254 Gene3D G3DSA:3.40.50.300 1 247 1.1E-54 T 28-03-2018 AM393_RS05915 fb3eafef3ab7b2de6aa72f447d0b9cf2 203 Pfam PF13462 Thioredoxin 40 194 3.0E-20 T 28-03-2018 IPR012336 Thioredoxin-like fold AM393_RS05915 fb3eafef3ab7b2de6aa72f447d0b9cf2 203 SUPERFAMILY SSF52833 32 194 3.48E-37 T 28-03-2018 IPR012336 Thioredoxin-like fold AM393_RS05915 fb3eafef3ab7b2de6aa72f447d0b9cf2 203 Gene3D G3DSA:3.40.30.10 31 203 2.7E-32 T 28-03-2018 AM393_RS05915 fb3eafef3ab7b2de6aa72f447d0b9cf2 203 ProSitePatterns PS00194 Thioredoxin family active site. 54 72 - T 28-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AM393_RS00910 82b745d2745ffed9d6857d8f687cd256 328 Hamap MF_01045 D-cysteine desulfhydrase [dcyD]. 1 328 73.801 T 28-03-2018 IPR023702 D-cysteine desulphhydrase, bacterial GO:0019148 KEGG: 00270+4.4.1.15 AM393_RS00910 82b745d2745ffed9d6857d8f687cd256 328 Gene3D G3DSA:3.40.50.1100 50 146 1.1E-29 T 28-03-2018 AM393_RS00910 82b745d2745ffed9d6857d8f687cd256 328 PIRSF PIRSF006278 1 328 1.7E-95 T 28-03-2018 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase AM393_RS00910 82b745d2745ffed9d6857d8f687cd256 328 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 15 316 2.7E-52 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AM393_RS00910 82b745d2745ffed9d6857d8f687cd256 328 Gene3D G3DSA:3.40.50.1100 147 327 9.3E-24 T 28-03-2018 AM393_RS00910 82b745d2745ffed9d6857d8f687cd256 328 SUPERFAMILY SSF53686 7 326 9.56E-85 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AM393_RS00910 82b745d2745ffed9d6857d8f687cd256 328 TIGRFAM TIGR01275 ACC_deam_rel: pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family 12 328 7.9E-137 T 28-03-2018 IPR005966 D-cysteine desulfhydrase GO:0003824 KEGG: 00270+4.4.1.15 AM393_RS01320 4b53681234d953b21161a9c8926a0a8d 97 Pfam PF04956 TrbC/VIRB2 family 4 94 8.4E-19 T 28-03-2018 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 AM393_RS24950 265ddb225a1b7ff4b319f4127adb5632 281 Pfam PF00797 N-acetyltransferase 22 256 1.4E-81 T 28-03-2018 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 AM393_RS24950 265ddb225a1b7ff4b319f4127adb5632 281 Gene3D G3DSA:3.30.2140.10 3 139 2.5E-38 T 28-03-2018 AM393_RS24950 265ddb225a1b7ff4b319f4127adb5632 281 Gene3D G3DSA:3.30.2140.10 143 266 4.9E-15 T 28-03-2018 AM393_RS24950 265ddb225a1b7ff4b319f4127adb5632 281 SUPERFAMILY SSF54001 3 269 4.41E-83 T 28-03-2018 AM393_RS24950 265ddb225a1b7ff4b319f4127adb5632 281 PRINTS PR01543 Arylamine N-acetyltransferase signature 69 91 7.7E-11 T 28-03-2018 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 AM393_RS24950 265ddb225a1b7ff4b319f4127adb5632 281 PRINTS PR01543 Arylamine N-acetyltransferase signature 21 44 7.7E-11 T 28-03-2018 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 AM393_RS24950 265ddb225a1b7ff4b319f4127adb5632 281 PRINTS PR01543 Arylamine N-acetyltransferase signature 45 68 7.7E-11 T 28-03-2018 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 AM393_RS24950 265ddb225a1b7ff4b319f4127adb5632 281 PRINTS PR01543 Arylamine N-acetyltransferase signature 101 126 7.7E-11 T 28-03-2018 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 AM393_RS11175 1f85614ccf625e36ece2de30bb337ee7 273 Gene3D G3DSA:1.10.10.10 1 82 3.3E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS11175 1f85614ccf625e36ece2de30bb337ee7 273 SUPERFAMILY SSF46785 2 84 1.15E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS11175 1f85614ccf625e36ece2de30bb337ee7 273 Gene3D G3DSA:3.40.190.10 83 227 5.2E-10 T 28-03-2018 AM393_RS11175 1f85614ccf625e36ece2de30bb337ee7 273 SUPERFAMILY SSF53850 89 260 1.09E-13 T 28-03-2018 AM393_RS11175 1f85614ccf625e36ece2de30bb337ee7 273 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 3.5E-20 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS11175 1f85614ccf625e36ece2de30bb337ee7 273 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 9.8E-10 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS11175 1f85614ccf625e36ece2de30bb337ee7 273 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 9.8E-10 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS11175 1f85614ccf625e36ece2de30bb337ee7 273 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 9.8E-10 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS11175 1f85614ccf625e36ece2de30bb337ee7 273 Hamap MF_01233 HTH-type transcriptional regulator HdfR [hdfR]. 1 272 49.344 T 28-03-2018 IPR020890 Transcription regulator HTH, HdfR GO:0003677|GO:0003700|GO:0045892 AM393_RS11175 1f85614ccf625e36ece2de30bb337ee7 273 Pfam PF03466 LysR substrate binding domain 87 264 3.7E-12 T 28-03-2018 IPR005119 LysR, substrate-binding AM393_RS08375 db212045af119e3508474833dfe85cf3 95 Pfam PF04077 DsrH like protein 8 90 3.7E-26 T 28-03-2018 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 AM393_RS08375 db212045af119e3508474833dfe85cf3 95 Gene3D G3DSA:3.40.1260.10 1 93 1.4E-21 T 28-03-2018 AM393_RS08375 db212045af119e3508474833dfe85cf3 95 TIGRFAM TIGR03011 sulf_tusB_dsrH: sulfur relay protein TusB/DsrH 2 95 4.3E-28 T 28-03-2018 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 AM393_RS08375 db212045af119e3508474833dfe85cf3 95 SUPERFAMILY SSF75169 1 95 1.04E-27 T 28-03-2018 IPR027396 DsrEFH-like AM393_RS08375 db212045af119e3508474833dfe85cf3 95 Hamap MF_01564 Protein TusB [tusB]. 1 95 27.845 T 28-03-2018 IPR023526 Sulphur relay, TusB GO:0002143|GO:0005737 AM393_RS02105 af3dda16b4afe3c0e335e826972d60ac 464 Pfam PF00232 Glycosyl hydrolase family 1 2 459 8.4E-154 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AM393_RS02105 af3dda16b4afe3c0e335e826972d60ac 464 SUPERFAMILY SSF51445 2 455 5.44E-162 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily AM393_RS02105 af3dda16b4afe3c0e335e826972d60ac 464 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 8 22 - T 28-03-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site AM393_RS02105 af3dda16b4afe3c0e335e826972d60ac 464 Gene3D G3DSA:3.20.20.80 1 463 1.2E-151 T 28-03-2018 AM393_RS02105 af3dda16b4afe3c0e335e826972d60ac 464 PRINTS PR00131 Glycosyl hydrolase family 1 signature 399 416 3.4E-15 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AM393_RS02105 af3dda16b4afe3c0e335e826972d60ac 464 PRINTS PR00131 Glycosyl hydrolase family 1 signature 291 305 3.4E-15 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AM393_RS02105 af3dda16b4afe3c0e335e826972d60ac 464 PRINTS PR00131 Glycosyl hydrolase family 1 signature 424 436 3.4E-15 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AM393_RS02105 af3dda16b4afe3c0e335e826972d60ac 464 PRINTS PR00131 Glycosyl hydrolase family 1 signature 378 389 3.4E-15 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AM393_RS02105 af3dda16b4afe3c0e335e826972d60ac 464 PRINTS PR00131 Glycosyl hydrolase family 1 signature 357 365 3.4E-15 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AM393_RS02105 af3dda16b4afe3c0e335e826972d60ac 464 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 357 365 - T 28-03-2018 IPR018120 Glycoside hydrolase family 1, active site AM393_RS09610 47e48b3f89d2d199995f7a9d965d12ad 341 SUPERFAMILY SSF50129 1 173 9.43E-54 T 28-03-2018 IPR011032 GroES-like AM393_RS09610 47e48b3f89d2d199995f7a9d965d12ad 341 Gene3D G3DSA:3.90.180.10 1 154 5.6E-46 T 28-03-2018 AM393_RS09610 47e48b3f89d2d199995f7a9d965d12ad 341 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 62 76 - T 28-03-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 AM393_RS09610 47e48b3f89d2d199995f7a9d965d12ad 341 Pfam PF00107 Zinc-binding dehydrogenase 174 301 2.2E-27 T 28-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AM393_RS09610 47e48b3f89d2d199995f7a9d965d12ad 341 Hamap MF_00627 L-threonine 3-dehydrogenase [tdh]. 1 340 61.082 T 28-03-2018 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00260+1.1.1.103|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-7378 AM393_RS09610 47e48b3f89d2d199995f7a9d965d12ad 341 TIGRFAM TIGR00692 tdh: L-threonine 3-dehydrogenase 3 340 4.9E-189 T 28-03-2018 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00260+1.1.1.103|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-7378 AM393_RS09610 47e48b3f89d2d199995f7a9d965d12ad 341 Gene3D G3DSA:3.40.50.10730 155 302 2.1E-26 T 28-03-2018 AM393_RS09610 47e48b3f89d2d199995f7a9d965d12ad 341 SUPERFAMILY SSF51735 141 305 6.53E-37 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS09610 47e48b3f89d2d199995f7a9d965d12ad 341 SMART SM00829 12 338 3.4E-5 T 28-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AM393_RS09610 47e48b3f89d2d199995f7a9d965d12ad 341 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 134 1.0E-31 T 28-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AM393_RS07710 0255d3a059c2aeae0ac0dbed9157d676 217 SUPERFAMILY SSF52317 1 215 8.29E-64 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AM393_RS07710 0255d3a059c2aeae0ac0dbed9157d676 217 PIRSF PIRSF006320 1 216 4.6E-103 T 28-03-2018 IPR026041 Glyoxalase ElbB AM393_RS07710 0255d3a059c2aeae0ac0dbed9157d676 217 Gene3D G3DSA:3.40.50.880 2 217 2.3E-39 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AM393_RS08895 0c640253f211de2c7f39f2e12f54798e 507 SMART SM00345 25 84 7.3E-15 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM393_RS08895 0c640253f211de2c7f39f2e12f54798e 507 Pfam PF00392 Bacterial regulatory proteins, gntR family 23 84 2.2E-15 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM393_RS08895 0c640253f211de2c7f39f2e12f54798e 507 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 44 58 6.5E-6 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM393_RS08895 0c640253f211de2c7f39f2e12f54798e 507 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 58 74 6.5E-6 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM393_RS08895 0c640253f211de2c7f39f2e12f54798e 507 SUPERFAMILY SSF46785 20 89 9.33E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS08895 0c640253f211de2c7f39f2e12f54798e 507 SUPERFAMILY SSF53383 119 488 9.14E-82 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM393_RS08895 0c640253f211de2c7f39f2e12f54798e 507 Pfam PF00155 Aminotransferase class I and II 151 455 6.9E-22 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AM393_RS08895 0c640253f211de2c7f39f2e12f54798e 507 Gene3D G3DSA:1.10.10.10 9 86 5.2E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS08895 0c640253f211de2c7f39f2e12f54798e 507 Gene3D G3DSA:3.90.1150.10 391 490 1.5E-17 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM393_RS08895 0c640253f211de2c7f39f2e12f54798e 507 Gene3D G3DSA:3.40.640.10 145 390 1.9E-40 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM393_RS24325 e1547d5802c97b945b5f9ebe804dc61f 465 TIGRFAM TIGR02715 amido_AtzE: amidohydrolase, AtzE family 8 456 5.6E-206 T 28-03-2018 IPR014087 Amidohydrolase, AtzE type KEGG: 00791+3.5.1.84|MetaCyc: PWY-5169 AM393_RS24325 e1547d5802c97b945b5f9ebe804dc61f 465 Pfam PF01425 Amidase 24 444 9.9E-102 T 28-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AM393_RS24325 e1547d5802c97b945b5f9ebe804dc61f 465 SUPERFAMILY SSF75304 1 453 2.62E-128 T 28-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AM393_RS24325 e1547d5802c97b945b5f9ebe804dc61f 465 Gene3D G3DSA:3.90.1300.10 6 454 5.7E-132 T 28-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AM393_RS27475 ad00058ed6cb0297a50d3a4d847fa987 466 SMART SM00304 193 246 9.8E-6 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM393_RS27475 ad00058ed6cb0297a50d3a4d847fa987 466 PRINTS PR00344 Bacterial sensor protein C-terminal signature 411 421 1.6E-7 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM393_RS27475 ad00058ed6cb0297a50d3a4d847fa987 466 PRINTS PR00344 Bacterial sensor protein C-terminal signature 428 446 1.6E-7 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM393_RS27475 ad00058ed6cb0297a50d3a4d847fa987 466 SUPERFAMILY SSF55874 302 459 5.5E-31 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS27475 ad00058ed6cb0297a50d3a4d847fa987 466 TIGRFAM TIGR01386 cztS_silS_copS: heavy metal sensor kinase 4 463 2.1E-185 T 28-03-2018 IPR006290 Heavy metal sensor kinase GO:0000160|GO:0004673|GO:0016020 AM393_RS27475 ad00058ed6cb0297a50d3a4d847fa987 466 Gene3D G3DSA:3.30.565.10 319 466 6.4E-31 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS27475 ad00058ed6cb0297a50d3a4d847fa987 466 Gene3D G3DSA:1.10.287.130 237 309 5.7E-11 T 28-03-2018 AM393_RS27475 ad00058ed6cb0297a50d3a4d847fa987 466 SMART SM00387 356 465 4.1E-26 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS27475 ad00058ed6cb0297a50d3a4d847fa987 466 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 356 462 1.6E-15 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS27475 ad00058ed6cb0297a50d3a4d847fa987 466 SUPERFAMILY SSF47384 231 313 5.3E-15 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM393_RS27475 ad00058ed6cb0297a50d3a4d847fa987 466 SMART SM00388 247 313 5.1E-14 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM393_RS27475 ad00058ed6cb0297a50d3a4d847fa987 466 Pfam PF00512 His Kinase A (phospho-acceptor) domain 248 313 3.1E-10 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM393_RS09020 5ad5e73bec571b04b845905b438dba00 314 Gene3D G3DSA:1.10.3720.10 2 296 1.1E-42 T 28-03-2018 AM393_RS09020 5ad5e73bec571b04b845905b438dba00 314 TIGRFAM TIGR02789 nickel_nikB: nickel ABC transporter, permease subunit NikB 1 312 2.7E-155 T 28-03-2018 IPR014156 Nickel ABC transporter, permease subunit NikB GO:0015099|GO:0035444 AM393_RS09020 5ad5e73bec571b04b845905b438dba00 314 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 308 3.5E-43 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS09020 5ad5e73bec571b04b845905b438dba00 314 SUPERFAMILY SSF161098 93 308 3.92E-20 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS22505 3257dd66bc7e7871fea248b3e828c239 159 SUPERFAMILY SSF54909 67 149 5.77E-15 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel AM393_RS22505 3257dd66bc7e7871fea248b3e828c239 159 SMART SM00344 4 113 3.4E-24 T 28-03-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AM393_RS22505 3257dd66bc7e7871fea248b3e828c239 159 Gene3D G3DSA:3.30.70.920 57 150 3.2E-17 T 28-03-2018 AM393_RS22505 3257dd66bc7e7871fea248b3e828c239 159 Gene3D G3DSA:1.10.10.10 4 55 2.2E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS22505 3257dd66bc7e7871fea248b3e828c239 159 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 31 50 3.3E-10 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AM393_RS22505 3257dd66bc7e7871fea248b3e828c239 159 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 20 31 3.3E-10 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AM393_RS22505 3257dd66bc7e7871fea248b3e828c239 159 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 4 20 3.3E-10 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AM393_RS22505 3257dd66bc7e7871fea248b3e828c239 159 Pfam PF13404 AsnC-type helix-turn-helix domain 4 45 7.3E-14 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AM393_RS22505 3257dd66bc7e7871fea248b3e828c239 159 SUPERFAMILY SSF46785 2 63 4.12E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS22505 3257dd66bc7e7871fea248b3e828c239 159 Pfam PF01037 Lrp/AsnC ligand binding domain 70 143 7.9E-17 T 28-03-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AM393_RS18520 e015256ba231e358f1df8a6c60128e71 189 Pfam PF07690 Major Facilitator Superfamily 23 173 2.7E-8 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS18520 e015256ba231e358f1df8a6c60128e71 189 Gene3D G3DSA:1.20.1250.20 7 176 7.6E-18 T 28-03-2018 AM393_RS18520 e015256ba231e358f1df8a6c60128e71 189 ProSitePatterns PS00216 Sugar transport proteins signature 1. 31 48 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM393_RS18520 e015256ba231e358f1df8a6c60128e71 189 SUPERFAMILY SSF103473 16 160 2.09E-18 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS10315 8acbd3c148ee80ce1fbeffa9207d4f9b 382 SMART SM00922 125 230 5.6E-18 T 28-03-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal AM393_RS10315 8acbd3c148ee80ce1fbeffa9207d4f9b 382 Pfam PF13378 Enolase C-terminal domain-like 139 355 2.1E-54 T 28-03-2018 IPR029065 Enolase C-terminal domain-like AM393_RS10315 8acbd3c148ee80ce1fbeffa9207d4f9b 382 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 82 107 - T 28-03-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 AM393_RS10315 8acbd3c148ee80ce1fbeffa9207d4f9b 382 SUPERFAMILY SSF54826 1 112 2.25E-32 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM393_RS10315 8acbd3c148ee80ce1fbeffa9207d4f9b 382 Gene3D G3DSA:3.20.20.120 123 344 1.6E-56 T 28-03-2018 IPR029065 Enolase C-terminal domain-like AM393_RS10315 8acbd3c148ee80ce1fbeffa9207d4f9b 382 Gene3D G3DSA:3.30.390.10 345 382 0.098 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM393_RS10315 8acbd3c148ee80ce1fbeffa9207d4f9b 382 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 180 211 - T 28-03-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 AM393_RS10315 8acbd3c148ee80ce1fbeffa9207d4f9b 382 Gene3D G3DSA:3.30.390.10 1 122 9.5E-42 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM393_RS10315 8acbd3c148ee80ce1fbeffa9207d4f9b 382 Hamap MF_01289 D-galactonate dehydratase [dgoD]. 1 382 76.664 T 28-03-2018 IPR023592 D-galactonate dehydratase GO:0008869|GO:0034194 KEGG: 00052+4.2.1.6 AM393_RS10315 8acbd3c148ee80ce1fbeffa9207d4f9b 382 SUPERFAMILY SSF51604 95 357 1.17E-72 T 28-03-2018 IPR029065 Enolase C-terminal domain-like AM393_RS10315 8acbd3c148ee80ce1fbeffa9207d4f9b 382 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 15 107 9.2E-30 T 28-03-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain AM393_RS20985 de7810053ca1ca3b943a5b426e67205f 416 SMART SM01329 28 412 3.6E-182 T 28-03-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 AM393_RS20985 de7810053ca1ca3b943a5b426e67205f 416 Gene3D G3DSA:3.40.718.10 17 416 2.1E-134 T 28-03-2018 AM393_RS20985 de7810053ca1ca3b943a5b426e67205f 416 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 29 412 6.7E-118 T 28-03-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 AM393_RS20985 de7810053ca1ca3b943a5b426e67205f 416 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 303 322 - T 28-03-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 AM393_RS20985 de7810053ca1ca3b943a5b426e67205f 416 TIGRFAM TIGR00183 prok_nadp_idh: isocitrate dehydrogenase, NADP-dependent 1 416 6.5E-239 T 28-03-2018 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 AM393_RS20985 de7810053ca1ca3b943a5b426e67205f 416 SUPERFAMILY SSF53659 3 416 1.27E-150 T 28-03-2018 AM393_RS15315 d446c312c6c5ad66b588dec0e0cb61b4 241 Pfam PF00318 Ribosomal protein S2 9 224 5.4E-94 T 28-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM393_RS15315 d446c312c6c5ad66b588dec0e0cb61b4 241 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 28-03-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 AM393_RS15315 d446c312c6c5ad66b588dec0e0cb61b4 241 Gene3D G3DSA:3.40.50.10490 5 241 2.1E-96 T 28-03-2018 AM393_RS15315 d446c312c6c5ad66b588dec0e0cb61b4 241 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 3 226 1.7E-108 T 28-03-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS15315 d446c312c6c5ad66b588dec0e0cb61b4 241 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 225 41.437 T 28-03-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS15315 d446c312c6c5ad66b588dec0e0cb61b4 241 SUPERFAMILY SSF52313 6 235 2.22E-96 T 28-03-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain AM393_RS15315 d446c312c6c5ad66b588dec0e0cb61b4 241 PRINTS PR00395 Ribosomal protein S2 signature 196 210 8.8E-38 T 28-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM393_RS15315 d446c312c6c5ad66b588dec0e0cb61b4 241 PRINTS PR00395 Ribosomal protein S2 signature 37 46 8.8E-38 T 28-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM393_RS15315 d446c312c6c5ad66b588dec0e0cb61b4 241 PRINTS PR00395 Ribosomal protein S2 signature 175 186 8.8E-38 T 28-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM393_RS15315 d446c312c6c5ad66b588dec0e0cb61b4 241 PRINTS PR00395 Ribosomal protein S2 signature 87 104 8.8E-38 T 28-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM393_RS15315 d446c312c6c5ad66b588dec0e0cb61b4 241 PRINTS PR00395 Ribosomal protein S2 signature 158 175 8.8E-38 T 28-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM393_RS15315 d446c312c6c5ad66b588dec0e0cb61b4 241 PRINTS PR00395 Ribosomal protein S2 signature 6 24 8.8E-38 T 28-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM393_RS15315 d446c312c6c5ad66b588dec0e0cb61b4 241 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 28-03-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 AM393_RS15380 9aec134cf78a816112696e7175503979 262 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 180 261 3.0E-31 T 28-03-2018 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 AM393_RS15380 9aec134cf78a816112696e7175503979 262 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 8 260 3.7E-113 T 28-03-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 AM393_RS15380 9aec134cf78a816112696e7175503979 262 Gene3D G3DSA:1.20.1180.10 197 262 1.5E-26 T 28-03-2018 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 AM393_RS15380 9aec134cf78a816112696e7175503979 262 Gene3D G3DSA:2.160.10.10 1 196 2.3E-45 T 28-03-2018 AM393_RS15380 9aec134cf78a816112696e7175503979 262 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 5 262 49.339 T 28-03-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 AM393_RS15380 9aec134cf78a816112696e7175503979 262 PIRSF PIRSF000456 5 262 3.5E-109 T 28-03-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 AM393_RS15380 9aec134cf78a816112696e7175503979 262 SUPERFAMILY SSF51161 2 262 1.23E-82 T 28-03-2018 IPR011004 Trimeric LpxA-like AM393_RS15380 9aec134cf78a816112696e7175503979 262 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 20 48 - T 28-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AM393_RS15380 9aec134cf78a816112696e7175503979 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 17 52 1.0E-8 T 28-03-2018 IPR001451 Hexapeptide repeat AM393_RS15380 9aec134cf78a816112696e7175503979 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 143 1.7E-8 T 28-03-2018 IPR001451 Hexapeptide repeat AM393_RS15380 9aec134cf78a816112696e7175503979 262 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 153 181 - T 28-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AM393_RS05215 3119c6e403c9b66ce3d9ae6575ce16d0 211 Pfam PF02570 Precorrin-8X methylmutase 10 205 1.7E-66 T 28-03-2018 IPR003722 Cobalamin (vitamin B12) biosynthesis CobH/CbiC, precorrin-8X methylmutase GO:0009236|GO:0016993 AM393_RS05215 3119c6e403c9b66ce3d9ae6575ce16d0 211 SUPERFAMILY SSF63965 9 209 8.5E-64 T 28-03-2018 IPR003722 Cobalamin (vitamin B12) biosynthesis CobH/CbiC, precorrin-8X methylmutase GO:0009236|GO:0016993 AM393_RS05215 3119c6e403c9b66ce3d9ae6575ce16d0 211 Gene3D G3DSA:3.40.50.10230 3 211 2.3E-75 T 28-03-2018 IPR003722 Cobalamin (vitamin B12) biosynthesis CobH/CbiC, precorrin-8X methylmutase GO:0009236|GO:0016993 AM393_RS04200 5c6f4bba810df4db24325ebf08bb5fec 302 Gene3D G3DSA:1.10.10.10 2 85 4.5E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS04200 5c6f4bba810df4db24325ebf08bb5fec 302 SUPERFAMILY SSF53850 89 295 5.61E-43 T 28-03-2018 AM393_RS04200 5c6f4bba810df4db24325ebf08bb5fec 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 2.7E-17 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS04200 5c6f4bba810df4db24325ebf08bb5fec 302 Gene3D G3DSA:3.40.190.10 87 178 1.6E-18 T 28-03-2018 AM393_RS04200 5c6f4bba810df4db24325ebf08bb5fec 302 Gene3D G3DSA:3.40.190.10 179 266 7.4E-21 T 28-03-2018 AM393_RS04200 5c6f4bba810df4db24325ebf08bb5fec 302 Pfam PF03466 LysR substrate binding domain 89 295 1.2E-41 T 28-03-2018 IPR005119 LysR, substrate-binding AM393_RS04200 5c6f4bba810df4db24325ebf08bb5fec 302 SUPERFAMILY SSF46785 4 88 3.76E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS04200 5c6f4bba810df4db24325ebf08bb5fec 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 1.3E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS04200 5c6f4bba810df4db24325ebf08bb5fec 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 1.3E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS04200 5c6f4bba810df4db24325ebf08bb5fec 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 1.3E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS16155 72cfe6e059bbc4a49618e38991723cd6 304 SUPERFAMILY SSF53067 3 299 1.77E-61 T 28-03-2018 AM393_RS16155 72cfe6e059bbc4a49618e38991723cd6 304 Gene3D G3DSA:3.30.420.40 1 115 1.9E-22 T 28-03-2018 AM393_RS16155 72cfe6e059bbc4a49618e38991723cd6 304 Gene3D G3DSA:3.30.420.40 116 301 9.9E-53 T 28-03-2018 AM393_RS16155 72cfe6e059bbc4a49618e38991723cd6 304 Pfam PF00480 ROK family 3 300 8.3E-96 T 28-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 AM393_RS16155 72cfe6e059bbc4a49618e38991723cd6 304 ProSitePatterns PS01125 ROK family signature. 130 157 - T 28-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 AM393_RS26240 110f9cc563fc73b3413473ab8be67050 278 Pfam PF00899 ThiF family 126 157 3.6E-6 T 28-03-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 AM393_RS26240 110f9cc563fc73b3413473ab8be67050 278 SUPERFAMILY SSF51735 109 252 3.74E-28 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS26240 110f9cc563fc73b3413473ab8be67050 278 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 14 95 8.2E-12 T 28-03-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 AM393_RS26240 110f9cc563fc73b3413473ab8be67050 278 Gene3D G3DSA:3.40.50.10860 1 119 2.0E-24 T 28-03-2018 AM393_RS26240 110f9cc563fc73b3413473ab8be67050 278 Gene3D G3DSA:3.40.50.720 120 275 7.2E-26 T 28-03-2018 AM393_RS26240 110f9cc563fc73b3413473ab8be67050 278 SUPERFAMILY SSF53223 1 107 1.04E-20 T 28-03-2018 AM393_RS03560 53e0239fdf0d2f65b11a8a7ba6da8e5d 774 TIGRFAM TIGR02073 PBP_1c: penicillin-binding protein 1C 38 772 3.5E-256 T 28-03-2018 IPR011815 Penicillin-binding protein 1C GO:0008955|GO:0009252 AM393_RS03560 53e0239fdf0d2f65b11a8a7ba6da8e5d 774 Pfam PF00905 Penicillin binding protein transpeptidase domain 302 518 1.4E-10 T 28-03-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AM393_RS03560 53e0239fdf0d2f65b11a8a7ba6da8e5d 774 Gene3D G3DSA:3.40.710.10 241 608 6.0E-64 T 28-03-2018 AM393_RS03560 53e0239fdf0d2f65b11a8a7ba6da8e5d 774 Pfam PF06832 Penicillin-Binding Protein C-terminus Family 689 770 1.6E-17 T 28-03-2018 IPR009647 Penicillin-binding, C-terminal AM393_RS03560 53e0239fdf0d2f65b11a8a7ba6da8e5d 774 SUPERFAMILY SSF53955 41 258 8.15E-65 T 28-03-2018 IPR023346 Lysozyme-like domain AM393_RS03560 53e0239fdf0d2f65b11a8a7ba6da8e5d 774 Gene3D G3DSA:1.10.3810.10 42 240 2.8E-58 T 28-03-2018 IPR001264 Glycosyl transferase, family 51 AM393_RS03560 53e0239fdf0d2f65b11a8a7ba6da8e5d 774 Pfam PF00912 Transglycosylase 60 226 3.3E-49 T 28-03-2018 IPR001264 Glycosyl transferase, family 51 AM393_RS03560 53e0239fdf0d2f65b11a8a7ba6da8e5d 774 SUPERFAMILY SSF56601 208 642 2.1E-90 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AM393_RS03165 bf604ec4656a450634936e5fa4586916 364 Pfam PF12857 TOBE-like domain 289 339 9.8E-8 T 28-03-2018 IPR024765 TOBE-like domain KEGG: 00920+3.6.3.25 AM393_RS03165 bf604ec4656a450634936e5fa4586916 364 TIGRFAM TIGR00968 3a0106s01: sulfate ABC transporter, ATP-binding protein 3 243 6.2E-129 T 28-03-2018 IPR005666 Sulphate transport system permease protein 1 GO:0006810|GO:0016020|GO:0042626 KEGG: 00920+3.6.3.25 AM393_RS03165 bf604ec4656a450634936e5fa4586916 364 SUPERFAMILY SSF50331 239 345 2.21E-12 T 28-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal AM393_RS03165 bf604ec4656a450634936e5fa4586916 364 SUPERFAMILY SSF52540 3 244 7.45E-86 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS03165 bf604ec4656a450634936e5fa4586916 364 Pfam PF00005 ABC transporter 18 164 5.0E-38 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS03165 bf604ec4656a450634936e5fa4586916 364 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS03165 bf604ec4656a450634936e5fa4586916 364 Gene3D G3DSA:3.40.50.300 1 252 3.3E-77 T 28-03-2018 AM393_RS03165 bf604ec4656a450634936e5fa4586916 364 SMART SM00382 27 214 4.2E-18 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS13430 f2cf0de6d98205852a4ea7001af93f0e 489 Pfam PF00916 Sulfate permease family 4 357 6.3E-53 T 28-03-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 AM393_RS11075 d16853e7ba00cb26c5939d900d68551a 383 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 75 84 - T 28-03-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 AM393_RS11075 d16853e7ba00cb26c5939d900d68551a 383 Gene3D G3DSA:3.30.70.360 183 297 1.2E-20 T 28-03-2018 AM393_RS11075 d16853e7ba00cb26c5939d900d68551a 383 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 110 147 - T 28-03-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 AM393_RS11075 d16853e7ba00cb26c5939d900d68551a 383 Gene3D G3DSA:3.40.630.10 1 182 8.8E-29 T 28-03-2018 AM393_RS11075 d16853e7ba00cb26c5939d900d68551a 383 Pfam PF07687 Peptidase dimerisation domain 178 287 7.0E-24 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain AM393_RS11075 d16853e7ba00cb26c5939d900d68551a 383 Hamap MF_01108 Acetylornithine deacetylase [argE]. 3 382 66.588 T 28-03-2018 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 AM393_RS11075 d16853e7ba00cb26c5939d900d68551a 383 SUPERFAMILY SSF53187 305 381 2.86E-58 T 28-03-2018 AM393_RS11075 d16853e7ba00cb26c5939d900d68551a 383 SUPERFAMILY SSF53187 3 180 2.86E-58 T 28-03-2018 AM393_RS11075 d16853e7ba00cb26c5939d900d68551a 383 TIGRFAM TIGR01892 AcOrn-deacetyl: acetylornithine deacetylase (ArgE) 10 377 1.1E-164 T 28-03-2018 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 AM393_RS11075 d16853e7ba00cb26c5939d900d68551a 383 SUPERFAMILY SSF55031 181 294 2.39E-20 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain AM393_RS11075 d16853e7ba00cb26c5939d900d68551a 383 Pfam PF01546 Peptidase family M20/M25/M40 76 377 1.2E-31 T 28-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 AM393_RS11670 7c1333d615508db5f9cba6439838f78b 394 Gene3D G3DSA:3.40.50.300 2 74 5.7E-11 T 28-03-2018 AM393_RS11670 7c1333d615508db5f9cba6439838f78b 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 28-03-2018 IPR031157 Tr-type G domain, conserved site AM393_RS11670 7c1333d615508db5f9cba6439838f78b 394 SUPERFAMILY SSF50447 205 301 1.61E-30 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain AM393_RS11670 7c1333d615508db5f9cba6439838f78b 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 61.22 T 28-03-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AM393_RS11670 7c1333d615508db5f9cba6439838f78b 394 SUPERFAMILY SSF50465 298 393 4.89E-36 T 28-03-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal AM393_RS11670 7c1333d615508db5f9cba6439838f78b 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.5E-24 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM393_RS11670 7c1333d615508db5f9cba6439838f78b 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.5E-24 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM393_RS11670 7c1333d615508db5f9cba6439838f78b 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.5E-24 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM393_RS11670 7c1333d615508db5f9cba6439838f78b 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.5E-24 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM393_RS11670 7c1333d615508db5f9cba6439838f78b 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.5E-24 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM393_RS11670 7c1333d615508db5f9cba6439838f78b 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 1.1E-14 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AM393_RS11670 7c1333d615508db5f9cba6439838f78b 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 393 3.5E-239 T 28-03-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AM393_RS11670 7c1333d615508db5f9cba6439838f78b 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 4.8E-58 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM393_RS11670 7c1333d615508db5f9cba6439838f78b 394 Gene3D G3DSA:2.40.30.10 300 393 2.7E-33 T 28-03-2018 AM393_RS11670 7c1333d615508db5f9cba6439838f78b 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 2.6E-33 T 28-03-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal AM393_RS11670 7c1333d615508db5f9cba6439838f78b 394 Gene3D G3DSA:2.40.30.10 206 299 6.9E-33 T 28-03-2018 AM393_RS11670 7c1333d615508db5f9cba6439838f78b 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 2.4E-17 T 28-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AM393_RS11670 7c1333d615508db5f9cba6439838f78b 394 Gene3D G3DSA:3.40.50.300 75 203 2.7E-31 T 28-03-2018 AM393_RS11670 7c1333d615508db5f9cba6439838f78b 394 SUPERFAMILY SSF52540 6 219 2.27E-60 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS22595 6d50cdac2c03c4baa379ac50067bd2ae 329 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 194 216 - T 28-03-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AM393_RS22595 6d50cdac2c03c4baa379ac50067bd2ae 329 SUPERFAMILY SSF52283 2 135 4.35E-45 T 28-03-2018 AM393_RS22595 6d50cdac2c03c4baa379ac50067bd2ae 329 Gene3D G3DSA:3.40.50.720 2 115 9.1E-30 T 28-03-2018 AM393_RS22595 6d50cdac2c03c4baa379ac50067bd2ae 329 SUPERFAMILY SSF51735 102 298 1.39E-56 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS22595 6d50cdac2c03c4baa379ac50067bd2ae 329 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 147 174 - T 28-03-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 AM393_RS22595 6d50cdac2c03c4baa379ac50067bd2ae 329 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 110 297 1.5E-53 T 28-03-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AM393_RS22595 6d50cdac2c03c4baa379ac50067bd2ae 329 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 223 239 - T 28-03-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AM393_RS22595 6d50cdac2c03c4baa379ac50067bd2ae 329 Gene3D G3DSA:3.40.50.720 116 300 7.8E-53 T 28-03-2018 AM393_RS22595 6d50cdac2c03c4baa379ac50067bd2ae 329 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 4 328 4.4E-35 T 28-03-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 AM393_RS14275 9a0fd3a7967131155c34788f38b1e170 645 Gene3D G3DSA:1.25.20.10 28 390 2.6E-51 T 28-03-2018 AM393_RS14275 9a0fd3a7967131155c34788f38b1e170 645 Gene3D G3DSA:1.10.530.10 473 645 1.9E-41 T 28-03-2018 AM393_RS14275 9a0fd3a7967131155c34788f38b1e170 645 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 501 529 - T 28-03-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 AM393_RS14275 9a0fd3a7967131155c34788f38b1e170 645 Pfam PF01464 Transglycosylase SLT domain 489 595 4.0E-33 T 28-03-2018 IPR008258 Transglycosylase SLT domain 1 AM393_RS14275 9a0fd3a7967131155c34788f38b1e170 645 SUPERFAMILY SSF53955 479 641 8.13E-51 T 28-03-2018 IPR023346 Lysozyme-like domain AM393_RS14275 9a0fd3a7967131155c34788f38b1e170 645 Pfam PF14718 Soluble lytic murein transglycosylase L domain 407 472 3.1E-23 T 28-03-2018 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 AM393_RS14275 9a0fd3a7967131155c34788f38b1e170 645 SUPERFAMILY SSF48435 28 477 5.1E-133 T 28-03-2018 IPR016026 Lytic transglycosylase, superhelical U-shaped and linker domain GO:0004553|GO:0042597 AM393_RS14275 9a0fd3a7967131155c34788f38b1e170 645 Gene3D G3DSA:1.10.1240.20 404 472 3.1E-19 T 28-03-2018 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 AM393_RS13920 3cacf505ae3bbdb1d1b2e490d9ea6707 488 Pfam PF00171 Aldehyde dehydrogenase family 17 474 1.4E-171 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AM393_RS13920 3cacf505ae3bbdb1d1b2e490d9ea6707 488 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 271 282 - T 28-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 AM393_RS13920 3cacf505ae3bbdb1d1b2e490d9ea6707 488 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 243 250 - T 28-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 AM393_RS13920 3cacf505ae3bbdb1d1b2e490d9ea6707 488 Gene3D G3DSA:3.40.605.10 1 259 5.6E-97 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AM393_RS13920 3cacf505ae3bbdb1d1b2e490d9ea6707 488 SUPERFAMILY SSF53720 3 480 1.96E-166 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AM393_RS13920 3cacf505ae3bbdb1d1b2e490d9ea6707 488 TIGRFAM TIGR02299 HpaE: 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase 4 487 8.5E-224 T 28-03-2018 IPR011985 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase GO:0018480|GO:1901023 AM393_RS13920 3cacf505ae3bbdb1d1b2e490d9ea6707 488 Gene3D G3DSA:3.40.309.10 260 460 3.0E-73 T 28-03-2018 AM393_RS04620 95dc002176a7cb899b5a4d01fd485882 730 Gene3D G3DSA:3.20.20.80 26 391 2.9E-27 T 28-03-2018 AM393_RS04620 95dc002176a7cb899b5a4d01fd485882 730 SUPERFAMILY SSF51445 31 354 5.77E-38 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily AM393_RS04620 95dc002176a7cb899b5a4d01fd485882 730 Pfam PF16990 Carbohydrate binding module (family 35) 608 729 3.6E-47 T 28-03-2018 IPR005084 Carbohydrate binding module family 6 GO:0030246 AM393_RS04620 95dc002176a7cb899b5a4d01fd485882 730 Gene3D G3DSA:2.60.40.10 398 506 6.3E-10 T 28-03-2018 IPR013783 Immunoglobulin-like fold AM393_RS04620 95dc002176a7cb899b5a4d01fd485882 730 SUPERFAMILY SSF49785 625 726 4.08E-6 T 28-03-2018 IPR008979 Galactose-binding domain-like AM393_RS04620 95dc002176a7cb899b5a4d01fd485882 730 Gene3D G3DSA:2.60.120.260 604 729 2.1E-13 T 28-03-2018 IPR008979 Galactose-binding domain-like AM393_RS04620 95dc002176a7cb899b5a4d01fd485882 730 Gene3D G3DSA:2.60.40.10 507 592 6.9E-11 T 28-03-2018 IPR013783 Immunoglobulin-like fold AM393_RS04620 95dc002176a7cb899b5a4d01fd485882 730 SUPERFAMILY SSF49265 398 501 3.08E-6 T 28-03-2018 IPR003961 Fibronectin type III GO:0005515 AM393_RS15205 a14d3437064642f614034ec5b45340d3 1102 Gene3D G3DSA:2.60.40.1180 1006 1099 2.0E-31 T 28-03-2018 AM393_RS15205 a14d3437064642f614034ec5b45340d3 1102 Pfam PF03714 Bacterial pullanase-associated domain 89 180 3.4E-9 T 28-03-2018 IPR005323 Pullulanase, carbohydrate-binding module 41 GO:0005975|GO:0030246 AM393_RS15205 a14d3437064642f614034ec5b45340d3 1102 Pfam PF11852 Domain of unknown function (DUF3372) 925 1085 4.2E-47 T 28-03-2018 IPR024561 Alpha-1,6-glucosidases, pullulanase-type, C-terminal AM393_RS15205 a14d3437064642f614034ec5b45340d3 1102 SUPERFAMILY SSF49452 52 180 1.8E-31 T 28-03-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 AM393_RS15205 a14d3437064642f614034ec5b45340d3 1102 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 316 400 2.8E-18 T 28-03-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077 AM393_RS15205 a14d3437064642f614034ec5b45340d3 1102 TIGRFAM TIGR02103 pullul_strch: alpha-1,6-glucosidases, pullulanase-type 193 1089 0.0 T 28-03-2018 IPR011839 Alpha-1,6-glucosidases, pullulanase-type GO:0005975|GO:0051060 AM393_RS15205 a14d3437064642f614034ec5b45340d3 1102 Gene3D G3DSA:2.60.40.1130 193 305 6.0E-28 T 28-03-2018 AM393_RS15205 a14d3437064642f614034ec5b45340d3 1102 Gene3D G3DSA:3.20.20.80 415 1005 4.4E-86 T 28-03-2018 AM393_RS15205 a14d3437064642f614034ec5b45340d3 1102 SUPERFAMILY SSF51445 412 984 2.02E-144 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily AM393_RS15205 a14d3437064642f614034ec5b45340d3 1102 SUPERFAMILY SSF81296 316 418 8.0E-25 T 28-03-2018 IPR014756 Immunoglobulin E-set AM393_RS15205 a14d3437064642f614034ec5b45340d3 1102 Gene3D G3DSA:2.60.40.10 307 414 2.7E-25 T 28-03-2018 IPR013783 Immunoglobulin-like fold AM393_RS15205 a14d3437064642f614034ec5b45340d3 1102 SMART SM00642 545 864 0.0012 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AM393_RS15205 a14d3437064642f614034ec5b45340d3 1102 SUPERFAMILY SSF81296 185 305 3.36E-32 T 28-03-2018 IPR014756 Immunoglobulin E-set AM393_RS15205 a14d3437064642f614034ec5b45340d3 1102 Gene3D G3DSA:2.60.40.1110 51 180 4.7E-27 T 28-03-2018 AM393_RS15205 a14d3437064642f614034ec5b45340d3 1102 SUPERFAMILY SSF51011 986 1101 7.91E-32 T 28-03-2018 AM393_RS22640 daefda0be8c86cb549a43bb24da1cd32 755 Gene3D G3DSA:3.10.450.40 117 215 1.9E-27 T 28-03-2018 AM393_RS22640 daefda0be8c86cb549a43bb24da1cd32 755 Gene3D G3DSA:3.10.450.40 217 306 6.6E-26 T 28-03-2018 AM393_RS22640 daefda0be8c86cb549a43bb24da1cd32 755 ProSitePatterns PS01165 Copper amine oxidase copper-binding site signature. 714 727 - T 28-03-2018 IPR000269 Copper amine oxidase GO:0005507|GO:0008131|GO:0009308|GO:0048038|GO:0055114 Reactome: R-HSA-211945 AM393_RS22640 daefda0be8c86cb549a43bb24da1cd32 755 Pfam PF02728 Copper amine oxidase, N3 domain 216 317 5.0E-29 T 28-03-2018 IPR015802 Copper amine oxidase, N3-terminal GO:0005507|GO:0008131|GO:0009308|GO:0048038|GO:0055114 Reactome: R-HSA-211945 AM393_RS22640 daefda0be8c86cb549a43bb24da1cd32 755 SUPERFAMILY SSF54416 216 325 1.63E-27 T 28-03-2018 IPR016182 Copper amine oxidase, N-terminal GO:0005507|GO:0008131|GO:0009308|GO:0048038|GO:0055114 Reactome: R-HSA-211945 AM393_RS22640 daefda0be8c86cb549a43bb24da1cd32 755 Pfam PF01179 Copper amine oxidase, enzyme domain 337 750 1.3E-126 T 28-03-2018 IPR015798 Copper amine oxidase, C-terminal GO:0005507|GO:0008131|GO:0009308|GO:0048038|GO:0055114 Reactome: R-HSA-211945 AM393_RS22640 daefda0be8c86cb549a43bb24da1cd32 755 Gene3D G3DSA:3.30.457.10 36 114 9.8E-13 T 28-03-2018 IPR012854 Copper amine oxidase-like, N-terminal AM393_RS22640 daefda0be8c86cb549a43bb24da1cd32 755 Pfam PF02727 Copper amine oxidase, N2 domain 124 209 2.1E-28 T 28-03-2018 IPR015800 Copper amine oxidase, N2-terminal GO:0005507|GO:0008131|GO:0009308|GO:0048038|GO:0055114 Reactome: R-HSA-211945 AM393_RS22640 daefda0be8c86cb549a43bb24da1cd32 755 SUPERFAMILY SSF55383 36 115 8.89E-19 T 28-03-2018 IPR012854 Copper amine oxidase-like, N-terminal AM393_RS22640 daefda0be8c86cb549a43bb24da1cd32 755 SUPERFAMILY SSF54416 122 214 3.63E-25 T 28-03-2018 IPR016182 Copper amine oxidase, N-terminal GO:0005507|GO:0008131|GO:0009308|GO:0048038|GO:0055114 Reactome: R-HSA-211945 AM393_RS22640 daefda0be8c86cb549a43bb24da1cd32 755 SUPERFAMILY SSF49998 333 751 1.57E-140 T 28-03-2018 IPR015798 Copper amine oxidase, C-terminal GO:0005507|GO:0008131|GO:0009308|GO:0048038|GO:0055114 Reactome: R-HSA-211945 AM393_RS22640 daefda0be8c86cb549a43bb24da1cd32 755 ProSitePatterns PS01164 Copper amine oxidase topaquinone signature. 485 498 - T 28-03-2018 IPR000269 Copper amine oxidase GO:0005507|GO:0008131|GO:0009308|GO:0048038|GO:0055114 Reactome: R-HSA-211945 AM393_RS22640 daefda0be8c86cb549a43bb24da1cd32 755 Gene3D G3DSA:2.70.98.20 307 755 1.3E-142 T 28-03-2018 IPR015798 Copper amine oxidase, C-terminal GO:0005507|GO:0008131|GO:0009308|GO:0048038|GO:0055114 Reactome: R-HSA-211945 AM393_RS22640 daefda0be8c86cb549a43bb24da1cd32 755 Pfam PF07833 Copper amine oxidase N-terminal domain 37 110 4.4E-12 T 28-03-2018 IPR012854 Copper amine oxidase-like, N-terminal AM393_RS23025 d15083e11275ab8b7be957648722d8ce 400 SUPERFAMILY SSF53901 4 272 4.14E-78 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM393_RS23025 d15083e11275ab8b7be957648722d8ce 400 Pfam PF00108 Thiolase, N-terminal domain 5 267 1.2E-73 T 28-03-2018 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 AM393_RS23025 d15083e11275ab8b7be957648722d8ce 400 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 398 2.5E-134 T 28-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 AM393_RS23025 d15083e11275ab8b7be957648722d8ce 400 Pfam PF02803 Thiolase, C-terminal domain 276 399 2.6E-44 T 28-03-2018 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 AM393_RS23025 d15083e11275ab8b7be957648722d8ce 400 PIRSF PIRSF000429 1 400 1.1E-129 T 28-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 AM393_RS23025 d15083e11275ab8b7be957648722d8ce 400 ProSitePatterns PS00737 Thiolases signature 2. 346 362 - T 28-03-2018 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 AM393_RS23025 d15083e11275ab8b7be957648722d8ce 400 SUPERFAMILY SSF53901 276 399 1.48E-44 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM393_RS23025 d15083e11275ab8b7be957648722d8ce 400 Gene3D G3DSA:3.40.47.10 279 397 2.4E-32 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM393_RS23025 d15083e11275ab8b7be957648722d8ce 400 Gene3D G3DSA:3.40.47.10 1 278 1.8E-53 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM393_RS23025 d15083e11275ab8b7be957648722d8ce 400 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 86 104 - T 28-03-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 AM393_RS23025 d15083e11275ab8b7be957648722d8ce 400 ProSitePatterns PS00099 Thiolases active site. 381 394 - T 28-03-2018 IPR020610 Thiolase, active site GO:0008152|GO:0016747 AM393_RS23025 d15083e11275ab8b7be957648722d8ce 400 TIGRFAM TIGR02430 pcaF: 3-oxoadipyl-CoA thiolase 3 400 5.4E-218 T 28-03-2018 IPR012793 Beta-ketoadipyl CoA thiolase GO:0016747|GO:0019619 KEGG: 00250+2.3.1.17|KEGG: 00360+2.3.1.174|KEGG: 00362+2.3.1.174|MetaCyc: PWY-1361|MetaCyc: PWY-2361|MetaCyc: PWY-6185 AM393_RS07010 69e0fe54753be100c06d716d20b8c379 194 PIRSF PIRSF018506 2 191 1.3E-102 T 28-03-2018 IPR025541 Propanediol/glycerol dehydratase, medium subunit KEGG: 00640+4.2.1.28|MetaCyc: PWY-7013 AM393_RS07010 69e0fe54753be100c06d716d20b8c379 194 SUPERFAMILY SSF52968 13 193 1.31E-75 T 28-03-2018 IPR010254 B12-dependent dehydratases, beta subunit AM393_RS07010 69e0fe54753be100c06d716d20b8c379 194 Pfam PF02288 Dehydratase medium subunit 36 148 7.0E-36 T 28-03-2018 IPR003208 Diol/glycerol dehydratase/dehydratase reactivating factor AM393_RS07010 69e0fe54753be100c06d716d20b8c379 194 Gene3D G3DSA:3.40.50.10150 17 188 3.1E-73 T 28-03-2018 IPR010254 B12-dependent dehydratases, beta subunit AM393_RS17190 48f0ccd3bda14069cae494d04827239a 119 Gene3D G3DSA:1.10.1220.10 1 119 2.2E-22 T 28-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 AM393_RS17190 48f0ccd3bda14069cae494d04827239a 119 Pfam PF03869 Arc-like DNA binding domain 7 47 6.1E-18 T 28-03-2018 IPR005569 Arc-like DNA binding domain GO:0003677 AM393_RS17190 48f0ccd3bda14069cae494d04827239a 119 SUPERFAMILY SSF47598 4 48 1.06E-16 T 28-03-2018 IPR010985 Ribbon-helix-helix GO:0006355 AM393_RS08295 65d260df8acc3a0e7c2880d08c124069 232 Gene3D G3DSA:3.30.300.20 17 107 8.3E-28 T 28-03-2018 IPR015946 K homology domain-like, alpha/beta AM393_RS08295 65d260df8acc3a0e7c2880d08c124069 232 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 28-03-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM393_RS08295 65d260df8acc3a0e7c2880d08c124069 232 SUPERFAMILY SSF54814 2 106 2.2E-37 T 28-03-2018 IPR009019 K homology domain, prokaryotic type GO:0003723 AM393_RS08295 65d260df8acc3a0e7c2880d08c124069 232 Pfam PF07650 KH domain 38 111 8.9E-19 T 28-03-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM393_RS08295 65d260df8acc3a0e7c2880d08c124069 232 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 39.15 T 28-03-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 AM393_RS08295 65d260df8acc3a0e7c2880d08c124069 232 SMART SM00322 60 125 1.6E-6 T 28-03-2018 IPR004087 K Homology domain GO:0003676 AM393_RS08295 65d260df8acc3a0e7c2880d08c124069 232 Gene3D G3DSA:3.30.1140.32 108 207 3.4E-40 T 28-03-2018 AM393_RS08295 65d260df8acc3a0e7c2880d08c124069 232 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 2.0E-41 T 28-03-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM393_RS08295 65d260df8acc3a0e7c2880d08c124069 232 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 2.5E-100 T 28-03-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 AM393_RS08295 65d260df8acc3a0e7c2880d08c124069 232 SUPERFAMILY SSF54821 108 206 6.93E-41 T 28-03-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM393_RS09400 18349f3e6394d2fd367f8bf46b78c10a 303 Gene3D G3DSA:1.20.58.180 216 294 2.6E-32 T 28-03-2018 AM393_RS09400 18349f3e6394d2fd367f8bf46b78c10a 303 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 7 293 62.697 T 28-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AM393_RS09400 18349f3e6394d2fd367f8bf46b78c10a 303 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 139 159 4.1E-71 T 28-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AM393_RS09400 18349f3e6394d2fd367f8bf46b78c10a 303 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 113 137 4.1E-71 T 28-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AM393_RS09400 18349f3e6394d2fd367f8bf46b78c10a 303 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 253 269 4.1E-71 T 28-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AM393_RS09400 18349f3e6394d2fd367f8bf46b78c10a 303 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 61 76 4.1E-71 T 28-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AM393_RS09400 18349f3e6394d2fd367f8bf46b78c10a 303 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 82 102 4.1E-71 T 28-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AM393_RS09400 18349f3e6394d2fd367f8bf46b78c10a 303 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 162 177 4.1E-71 T 28-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AM393_RS09400 18349f3e6394d2fd367f8bf46b78c10a 303 SUPERFAMILY SSF55681 8 292 5.78E-134 T 28-03-2018 AM393_RS09400 18349f3e6394d2fd367f8bf46b78c10a 303 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 9 292 3.8E-150 T 28-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AM393_RS09400 18349f3e6394d2fd367f8bf46b78c10a 303 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 8 301 1.0E-177 T 28-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AM393_RS09400 18349f3e6394d2fd367f8bf46b78c10a 303 Gene3D G3DSA:3.30.930.10 1 214 2.4E-87 T 28-03-2018 AM393_RS00230 6f0dbff0df02d61f42e2dfb12441ac86 271 SUPERFAMILY SSF54001 51 255 2.55E-38 T 28-03-2018 AM393_RS00230 6f0dbff0df02d61f42e2dfb12441ac86 271 SMART SM00460 158 220 6.3E-16 T 28-03-2018 IPR002931 Transglutaminase-like AM393_RS00230 6f0dbff0df02d61f42e2dfb12441ac86 271 Pfam PF01841 Transglutaminase-like superfamily 116 217 1.4E-23 T 28-03-2018 IPR002931 Transglutaminase-like AM393_RS00230 6f0dbff0df02d61f42e2dfb12441ac86 271 Gene3D G3DSA:3.90.260.10 140 230 1.6E-6 T 28-03-2018 IPR002931 Transglutaminase-like AM393_RS00230 6f0dbff0df02d61f42e2dfb12441ac86 271 Pfam PF08379 Bacterial transglutaminase-like N-terminal region 5 80 7.8E-21 T 28-03-2018 IPR013589 Bacterial transglutaminase-like, N-terminal AM393_RS12845 a837edb224fbdf3489e978e74af5cddc 810 Gene3D G3DSA:2.40.50.140 641 726 2.9E-20 T 28-03-2018 AM393_RS12845 a837edb224fbdf3489e978e74af5cddc 810 Gene3D G3DSA:1.10.10.10 15 79 9.1E-6 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS12845 a837edb224fbdf3489e978e74af5cddc 810 Pfam PF00575 S1 RNA binding domain 641 723 4.6E-17 T 28-03-2018 IPR003029 S1 domain GO:0003676 AM393_RS12845 a837edb224fbdf3489e978e74af5cddc 810 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 67 725 1.8E-283 T 28-03-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 AM393_RS12845 a837edb224fbdf3489e978e74af5cddc 810 Pfam PF00773 RNB domain 260 587 1.9E-110 T 28-03-2018 AM393_RS12845 a837edb224fbdf3489e978e74af5cddc 810 Pfam PF08206 Ribonuclease B OB domain 87 144 4.2E-22 T 28-03-2018 IPR013223 Ribonuclease B, N-terminal OB domain AM393_RS12845 a837edb224fbdf3489e978e74af5cddc 810 SMART SM00316 642 725 1.9E-15 T 28-03-2018 IPR022967 RNA-binding domain, S1 AM393_RS12845 a837edb224fbdf3489e978e74af5cddc 810 ProSitePatterns PS01175 Ribonuclease II family signature. 555 579 - T 28-03-2018 IPR022966 Ribonuclease II/R, conserved site AM393_RS12845 a837edb224fbdf3489e978e74af5cddc 810 Pfam PF08461 Ribonuclease R winged-helix domain 23 85 6.4E-15 T 28-03-2018 IPR013668 Ribonuclease R winged-helix domain AM393_RS12845 a837edb224fbdf3489e978e74af5cddc 810 SUPERFAMILY SSF50249 67 145 1.72E-16 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM393_RS12845 a837edb224fbdf3489e978e74af5cddc 810 SUPERFAMILY SSF50249 222 641 2.17E-143 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM393_RS12845 a837edb224fbdf3489e978e74af5cddc 810 SMART SM00955 260 588 7.1E-186 T 28-03-2018 AM393_RS12845 a837edb224fbdf3489e978e74af5cddc 810 Hamap MF_01895 Ribonuclease R [rnr]. 38 725 58.295 T 28-03-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 AM393_RS12845 a837edb224fbdf3489e978e74af5cddc 810 SUPERFAMILY SSF50249 138 235 8.76E-15 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM393_RS12845 a837edb224fbdf3489e978e74af5cddc 810 TIGRFAM TIGR02063 RNase_R: ribonuclease R 19 725 1.8E-285 T 28-03-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 AM393_RS12845 a837edb224fbdf3489e978e74af5cddc 810 SUPERFAMILY SSF50249 644 724 6.09E-22 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM393_RS12845 a837edb224fbdf3489e978e74af5cddc 810 SMART SM00357 86 145 2.1E-16 T 28-03-2018 IPR011129 Cold shock domain GO:0003676 AM393_RS06005 e1645a6e22bb380e2565ecad9e323598 285 Gene3D G3DSA:3.30.70.100 180 273 1.1E-29 T 28-03-2018 AM393_RS06005 e1645a6e22bb380e2565ecad9e323598 285 Pfam PF05552 Conserved TM helix 15 64 4.2E-15 T 28-03-2018 IPR008910 Conserved TM helix AM393_RS06005 e1645a6e22bb380e2565ecad9e323598 285 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 143 177 - T 28-03-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 AM393_RS06005 e1645a6e22bb380e2565ecad9e323598 285 SUPERFAMILY SSF82689 181 277 7.32E-33 T 28-03-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 AM393_RS06005 e1645a6e22bb380e2565ecad9e323598 285 Gene3D G3DSA:2.30.30.60 129 179 1.1E-15 T 28-03-2018 AM393_RS06005 e1645a6e22bb380e2565ecad9e323598 285 SUPERFAMILY SSF82861 28 112 4.58E-18 T 28-03-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 AM393_RS06005 e1645a6e22bb380e2565ecad9e323598 285 SUPERFAMILY SSF50182 114 179 4.9E-17 T 28-03-2018 IPR010920 LSM domain AM393_RS06005 e1645a6e22bb380e2565ecad9e323598 285 Pfam PF00924 Mechanosensitive ion channel 72 268 5.3E-58 T 28-03-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AM393_RS10670 a66fde00625be8de9ff44708be662a53 299 SUPERFAMILY SSF69593 20 291 6.54E-26 T 28-03-2018 AM393_RS10670 a66fde00625be8de9ff44708be662a53 299 Gene3D G3DSA:3.40.1130.10 50 225 1.2E-20 T 28-03-2018 AM393_RS10670 a66fde00625be8de9ff44708be662a53 299 Pfam PF01553 Acyltransferase 75 211 1.4E-12 T 28-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AM393_RS10670 a66fde00625be8de9ff44708be662a53 299 SMART SM00563 88 215 4.8E-16 T 28-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AM393_RS05495 f8166c73ac7adc7f00dfb6d81d679836 420 Gene3D G3DSA:3.20.20.10 34 263 3.4E-46 T 28-03-2018 IPR029066 PLP-binding barrel AM393_RS05495 f8166c73ac7adc7f00dfb6d81d679836 420 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 14 419 39.371 T 28-03-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AM393_RS05495 f8166c73ac7adc7f00dfb6d81d679836 420 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 216 229 - T 28-03-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site AM393_RS05495 f8166c73ac7adc7f00dfb6d81d679836 420 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 8 418 5.5E-138 T 28-03-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AM393_RS05495 f8166c73ac7adc7f00dfb6d81d679836 420 SUPERFAMILY SSF51419 25 277 1.89E-56 T 28-03-2018 IPR029066 PLP-binding barrel AM393_RS05495 f8166c73ac7adc7f00dfb6d81d679836 420 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 33 275 6.0E-63 T 28-03-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 AM393_RS05495 f8166c73ac7adc7f00dfb6d81d679836 420 SUPERFAMILY SSF50621 250 419 9.21E-58 T 28-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AM393_RS05495 f8166c73ac7adc7f00dfb6d81d679836 420 PRINTS PR01181 Diaminopimelate decarboxylase signature 293 311 1.3E-27 T 28-03-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AM393_RS05495 f8166c73ac7adc7f00dfb6d81d679836 420 PRINTS PR01181 Diaminopimelate decarboxylase signature 69 86 1.3E-27 T 28-03-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AM393_RS05495 f8166c73ac7adc7f00dfb6d81d679836 420 PRINTS PR01181 Diaminopimelate decarboxylase signature 157 166 1.3E-27 T 28-03-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AM393_RS05495 f8166c73ac7adc7f00dfb6d81d679836 420 PRINTS PR01181 Diaminopimelate decarboxylase signature 386 408 1.3E-27 T 28-03-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AM393_RS05495 f8166c73ac7adc7f00dfb6d81d679836 420 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 51 69 - T 28-03-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site AM393_RS05495 f8166c73ac7adc7f00dfb6d81d679836 420 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 29 376 1.9E-24 T 28-03-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 AM393_RS05495 f8166c73ac7adc7f00dfb6d81d679836 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 376 389 1.1E-19 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AM393_RS05495 f8166c73ac7adc7f00dfb6d81d679836 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 51 69 1.1E-19 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AM393_RS05495 f8166c73ac7adc7f00dfb6d81d679836 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 71 83 1.1E-19 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AM393_RS05495 f8166c73ac7adc7f00dfb6d81d679836 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 265 284 1.1E-19 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AM393_RS05495 f8166c73ac7adc7f00dfb6d81d679836 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 182 195 1.1E-19 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AM393_RS05495 f8166c73ac7adc7f00dfb6d81d679836 420 Gene3D G3DSA:2.40.37.10 264 420 1.8E-45 T 28-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AM393_RS13590 4399f88007d487116e578ec36a353db0 174 Gene3D G3DSA:3.50.70.10 23 155 3.4E-10 T 28-03-2018 IPR016088 Chalcone isomerase, 3-layer sandwich GO:0009813|GO:0045430 AM393_RS21095 eb315f74b6c0900c5d99c46898d7802b 304 Hamap MF_01943 Lipid A biosynthesis palmitoleoyltransferase [lpxP]. 1 304 67.816 T 28-03-2018 IPR030857 Lipid A biosynthesis palmitoleoyltransferase, LpxP GO:0008951|GO:0009409|GO:0036104 KEGG: 00600+2.3.1.24 AM393_RS21095 eb315f74b6c0900c5d99c46898d7802b 304 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 2 304 48.562 T 28-03-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24 AM393_RS21095 eb315f74b6c0900c5d99c46898d7802b 304 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 4 295 1.6E-96 T 28-03-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 AM393_RS21095 eb315f74b6c0900c5d99c46898d7802b 304 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 4 304 4.7E-132 T 28-03-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24 AM393_RS21095 eb315f74b6c0900c5d99c46898d7802b 304 PIRSF PIRSF026649 1 304 7.6E-91 T 28-03-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 AM393_RS04920 1bb37db2e77806576e9c3c6a725f6dab 916 SMART SM00388 292 357 1.5E-24 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM393_RS04920 1bb37db2e77806576e9c3c6a725f6dab 916 Pfam PF00072 Response regulator receiver domain 669 779 1.5E-27 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM393_RS04920 1bb37db2e77806576e9c3c6a725f6dab 916 SUPERFAMILY SSF47384 277 358 4.51E-22 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM393_RS04920 1bb37db2e77806576e9c3c6a725f6dab 916 Gene3D G3DSA:3.30.565.10 361 527 1.7E-48 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS04920 1bb37db2e77806576e9c3c6a725f6dab 916 SMART SM00304 200 252 1.7E-7 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM393_RS04920 1bb37db2e77806576e9c3c6a725f6dab 916 Gene3D G3DSA:1.20.120.160 803 914 4.1E-19 T 28-03-2018 AM393_RS04920 1bb37db2e77806576e9c3c6a725f6dab 916 SUPERFAMILY SSF55874 346 517 1.09E-43 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS04920 1bb37db2e77806576e9c3c6a725f6dab 916 Gene3D G3DSA:3.40.50.2300 660 788 5.7E-36 T 28-03-2018 AM393_RS04920 1bb37db2e77806576e9c3c6a725f6dab 916 Pfam PF00512 His Kinase A (phospho-acceptor) domain 293 357 2.1E-19 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM393_RS04920 1bb37db2e77806576e9c3c6a725f6dab 916 SUPERFAMILY SSF52172 666 786 3.84E-35 T 28-03-2018 IPR011006 CheY-like superfamily AM393_RS04920 1bb37db2e77806576e9c3c6a725f6dab 916 PRINTS PR00344 Bacterial sensor protein C-terminal signature 463 473 4.8E-14 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM393_RS04920 1bb37db2e77806576e9c3c6a725f6dab 916 PRINTS PR00344 Bacterial sensor protein C-terminal signature 445 459 4.8E-14 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM393_RS04920 1bb37db2e77806576e9c3c6a725f6dab 916 PRINTS PR00344 Bacterial sensor protein C-terminal signature 480 498 4.8E-14 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM393_RS04920 1bb37db2e77806576e9c3c6a725f6dab 916 PRINTS PR00344 Bacterial sensor protein C-terminal signature 504 517 4.8E-14 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM393_RS04920 1bb37db2e77806576e9c3c6a725f6dab 916 SUPERFAMILY SSF47226 806 907 5.89E-21 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AM393_RS04920 1bb37db2e77806576e9c3c6a725f6dab 916 SUPERFAMILY SSF47226 763 776 5.89E-21 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AM393_RS04920 1bb37db2e77806576e9c3c6a725f6dab 916 SMART SM00387 404 520 7.5E-38 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS04920 1bb37db2e77806576e9c3c6a725f6dab 916 Pfam PF01627 Hpt domain 826 906 3.2E-13 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AM393_RS04920 1bb37db2e77806576e9c3c6a725f6dab 916 SMART SM00073 817 912 1.4E-22 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AM393_RS04920 1bb37db2e77806576e9c3c6a725f6dab 916 Pfam PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) 32 177 4.6E-53 T 28-03-2018 IPR019247 Histidine kinase BarA, N-terminal AM393_RS04920 1bb37db2e77806576e9c3c6a725f6dab 916 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 404 519 1.9E-31 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS04920 1bb37db2e77806576e9c3c6a725f6dab 916 SMART SM00448 667 780 2.4E-32 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM393_RS04920 1bb37db2e77806576e9c3c6a725f6dab 916 Gene3D G3DSA:1.10.287.130 282 353 2.7E-20 T 28-03-2018 AM393_RS04920 1bb37db2e77806576e9c3c6a725f6dab 916 SUPERFAMILY SSF158472 200 249 7.45E-5 T 28-03-2018 AM393_RS03315 1ee62fdeed865cf671e490a7b7d24965 664 Pfam PF02780 Transketolase, C-terminal domain 541 654 6.1E-19 T 28-03-2018 IPR033248 Transketolase, C-terminal domain AM393_RS03315 1ee62fdeed865cf671e490a7b7d24965 664 ProSitePatterns PS00802 Transketolase signature 2. 466 482 - T 28-03-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AM393_RS03315 1ee62fdeed865cf671e490a7b7d24965 664 SUPERFAMILY SSF52518 333 525 3.81E-68 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold AM393_RS03315 1ee62fdeed865cf671e490a7b7d24965 664 Gene3D G3DSA:3.40.50.970 364 539 2.3E-42 T 28-03-2018 AM393_RS03315 1ee62fdeed865cf671e490a7b7d24965 664 Gene3D G3DSA:3.40.50.970 1 363 2.0E-123 T 28-03-2018 AM393_RS03315 1ee62fdeed865cf671e490a7b7d24965 664 SUPERFAMILY SSF52922 532 663 1.7E-41 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AM393_RS03315 1ee62fdeed865cf671e490a7b7d24965 664 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 3 333 9.7E-170 T 28-03-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AM393_RS03315 1ee62fdeed865cf671e490a7b7d24965 664 Pfam PF02779 Transketolase, pyrimidine binding domain 353 523 1.9E-46 T 28-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AM393_RS03315 1ee62fdeed865cf671e490a7b7d24965 664 ProSitePatterns PS00801 Transketolase signature 1. 11 31 - T 28-03-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AM393_RS03315 1ee62fdeed865cf671e490a7b7d24965 664 Gene3D G3DSA:3.40.50.920 540 664 3.0E-31 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AM393_RS03315 1ee62fdeed865cf671e490a7b7d24965 664 SMART SM00861 354 524 4.5E-67 T 28-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AM393_RS03315 1ee62fdeed865cf671e490a7b7d24965 664 SUPERFAMILY SSF52518 4 320 2.6E-119 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold AM393_RS03315 1ee62fdeed865cf671e490a7b7d24965 664 TIGRFAM TIGR00232 tktlase_bact: transketolase 5 663 0.0 T 28-03-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 AM393_RS16805 14c9f7fc3c8e8369d0ab93648d812a58 833 SUPERFAMILY SSF56784 575 823 2.69E-61 T 28-03-2018 IPR023214 HAD-like domain AM393_RS16805 14c9f7fc3c8e8369d0ab93648d812a58 833 SUPERFAMILY SSF56784 518 538 2.69E-61 T 28-03-2018 IPR023214 HAD-like domain AM393_RS16805 14c9f7fc3c8e8369d0ab93648d812a58 833 Gene3D G3DSA:3.40.50.1000 644 783 1.1E-48 T 28-03-2018 IPR023214 HAD-like domain AM393_RS16805 14c9f7fc3c8e8369d0ab93648d812a58 833 Gene3D G3DSA:3.30.70.100 95 166 1.4E-21 T 28-03-2018 AM393_RS16805 14c9f7fc3c8e8369d0ab93648d812a58 833 SUPERFAMILY SSF55008 3 67 3.93E-12 T 28-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AM393_RS16805 14c9f7fc3c8e8369d0ab93648d812a58 833 Pfam PF00122 E1-E2 ATPase 319 499 4.2E-47 T 28-03-2018 AM393_RS16805 14c9f7fc3c8e8369d0ab93648d812a58 833 SUPERFAMILY SSF81665 285 322 3.92E-12 T 28-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 AM393_RS16805 14c9f7fc3c8e8369d0ab93648d812a58 833 SUPERFAMILY SSF81665 766 780 3.92E-12 T 28-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 AM393_RS16805 14c9f7fc3c8e8369d0ab93648d812a58 833 SUPERFAMILY SSF81665 419 514 3.92E-12 T 28-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 AM393_RS16805 14c9f7fc3c8e8369d0ab93648d812a58 833 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 290 794 9.6E-88 T 28-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AM393_RS16805 14c9f7fc3c8e8369d0ab93648d812a58 833 Gene3D G3DSA:3.30.70.100 1 82 1.2E-13 T 28-03-2018 AM393_RS16805 14c9f7fc3c8e8369d0ab93648d812a58 833 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 522 528 - T 28-03-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 AM393_RS16805 14c9f7fc3c8e8369d0ab93648d812a58 833 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 251 826 3.5E-183 T 28-03-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 AM393_RS16805 14c9f7fc3c8e8369d0ab93648d812a58 833 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 232 826 3.7E-192 T 28-03-2018 AM393_RS16805 14c9f7fc3c8e8369d0ab93648d812a58 833 Pfam PF00702 haloacid dehalogenase-like hydrolase 517 731 8.5E-51 T 28-03-2018 AM393_RS16805 14c9f7fc3c8e8369d0ab93648d812a58 833 ProSitePatterns PS01047 Heavy-metal-associated domain. 104 133 - T 28-03-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 AM393_RS16805 14c9f7fc3c8e8369d0ab93648d812a58 833 SUPERFAMILY SSF81653 321 418 5.75E-22 T 28-03-2018 IPR008250 P-type ATPase, A domain Reactome: R-HSA-936837 AM393_RS16805 14c9f7fc3c8e8369d0ab93648d812a58 833 PRINTS PR00943 Copper-transporting ATPase signature 140 160 6.1E-7 T 28-03-2018 AM393_RS16805 14c9f7fc3c8e8369d0ab93648d812a58 833 PRINTS PR00943 Copper-transporting ATPase signature 503 518 6.1E-7 T 28-03-2018 AM393_RS16805 14c9f7fc3c8e8369d0ab93648d812a58 833 PRINTS PR00943 Copper-transporting ATPase signature 441 455 6.1E-7 T 28-03-2018 AM393_RS16805 14c9f7fc3c8e8369d0ab93648d812a58 833 PRINTS PR00943 Copper-transporting ATPase signature 694 711 6.1E-7 T 28-03-2018 AM393_RS16805 14c9f7fc3c8e8369d0ab93648d812a58 833 PRINTS PR00943 Copper-transporting ATPase signature 236 255 6.1E-7 T 28-03-2018 AM393_RS16805 14c9f7fc3c8e8369d0ab93648d812a58 833 SUPERFAMILY SSF55008 100 164 7.59E-19 T 28-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AM393_RS16805 14c9f7fc3c8e8369d0ab93648d812a58 833 Pfam PF00403 Heavy-metal-associated domain 8 61 1.5E-9 T 28-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AM393_RS16805 14c9f7fc3c8e8369d0ab93648d812a58 833 Pfam PF00403 Heavy-metal-associated domain 103 158 1.5E-15 T 28-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AM393_RS16805 14c9f7fc3c8e8369d0ab93648d812a58 833 Gene3D G3DSA:1.20.1110.10 281 536 2.5E-43 T 28-03-2018 AM393_RS16805 14c9f7fc3c8e8369d0ab93648d812a58 833 Gene3D G3DSA:3.40.1110.10 537 643 1.1E-31 T 28-03-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 AM393_RS16805 14c9f7fc3c8e8369d0ab93648d812a58 833 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 740 752 2.5E-25 T 28-03-2018 AM393_RS16805 14c9f7fc3c8e8369d0ab93648d812a58 833 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 520 534 2.5E-25 T 28-03-2018 AM393_RS16805 14c9f7fc3c8e8369d0ab93648d812a58 833 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 368 382 2.5E-25 T 28-03-2018 AM393_RS16805 14c9f7fc3c8e8369d0ab93648d812a58 833 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 642 653 2.5E-25 T 28-03-2018 AM393_RS16805 14c9f7fc3c8e8369d0ab93648d812a58 833 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 664 674 2.5E-25 T 28-03-2018 AM393_RS16805 14c9f7fc3c8e8369d0ab93648d812a58 833 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 717 736 2.5E-25 T 28-03-2018 AM393_RS28070 2e2ea63e32c22137585fabf303af83ad 82 Gene3D G3DSA:3.30.420.10 1 73 5.2E-12 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM393_RS28070 2e2ea63e32c22137585fabf303af83ad 82 SUPERFAMILY SSF53098 3 67 8.95E-14 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM393_RS06150 f9724104bcb89239c2ebdaef8b3a5a9f 464 PRINTS PR00171 Sugar transporter signature 26 36 2.3E-23 T 28-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 AM393_RS06150 f9724104bcb89239c2ebdaef8b3a5a9f 464 PRINTS PR00171 Sugar transporter signature 262 272 2.3E-23 T 28-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 AM393_RS06150 f9724104bcb89239c2ebdaef8b3a5a9f 464 PRINTS PR00171 Sugar transporter signature 352 373 2.3E-23 T 28-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 AM393_RS06150 f9724104bcb89239c2ebdaef8b3a5a9f 464 PRINTS PR00171 Sugar transporter signature 375 387 2.3E-23 T 28-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 AM393_RS06150 f9724104bcb89239c2ebdaef8b3a5a9f 464 PRINTS PR00171 Sugar transporter signature 109 128 2.3E-23 T 28-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 AM393_RS06150 f9724104bcb89239c2ebdaef8b3a5a9f 464 ProSitePatterns PS00217 Sugar transport proteins signature 2. 114 139 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM393_RS06150 f9724104bcb89239c2ebdaef8b3a5a9f 464 Pfam PF00083 Sugar (and other) transporter 18 450 8.1E-139 T 28-03-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 AM393_RS06150 f9724104bcb89239c2ebdaef8b3a5a9f 464 TIGRFAM TIGR00879 SP: MFS transporter, sugar porter (SP) family 7 447 1.4E-149 T 28-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 AM393_RS06150 f9724104bcb89239c2ebdaef8b3a5a9f 464 ProSitePatterns PS00216 Sugar transport proteins signature 1. 307 323 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM393_RS06150 f9724104bcb89239c2ebdaef8b3a5a9f 464 SUPERFAMILY SSF103473 13 448 3.14E-77 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS06150 f9724104bcb89239c2ebdaef8b3a5a9f 464 Gene3D G3DSA:1.20.1250.20 3 231 1.0E-36 T 28-03-2018 AM393_RS06150 f9724104bcb89239c2ebdaef8b3a5a9f 464 Gene3D G3DSA:1.20.1250.20 232 462 1.3E-40 T 28-03-2018 AM393_RS18825 c9df10aa53e087e569f294e4ada8c541 347 Gene3D G3DSA:2.70.98.10 5 347 6.9E-107 T 28-03-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 AM393_RS18825 c9df10aa53e087e569f294e4ada8c541 347 SUPERFAMILY SSF74650 3 344 3.27E-107 T 28-03-2018 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 AM393_RS18825 c9df10aa53e087e569f294e4ada8c541 347 TIGRFAM TIGR02636 galM_Leloir: galactose mutarotase 12 344 1.2E-137 T 28-03-2018 IPR013458 Aldose 1-epimerase, bacterial GO:0004034|GO:0006012 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 AM393_RS18825 c9df10aa53e087e569f294e4ada8c541 347 PIRSF PIRSF005096 1 347 6.1E-123 T 28-03-2018 IPR015443 Aldose 1-epimerase GO:0016853|GO:0019318 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 AM393_RS18825 c9df10aa53e087e569f294e4ada8c541 347 ProSitePatterns PS00545 Aldose 1-epimerase putative active site. 172 181 - T 28-03-2018 IPR018052 Aldose 1-epimerase, conserved site KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 AM393_RS18825 c9df10aa53e087e569f294e4ada8c541 347 Pfam PF01263 Aldose 1-epimerase 17 342 2.8E-88 T 28-03-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 AM393_RS03490 124f64c613d6d2b2bff6a2130129694d 622 Gene3D G3DSA:3.40.720.10 58 462 1.6E-55 T 28-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AM393_RS03490 124f64c613d6d2b2bff6a2130129694d 622 Gene3D G3DSA:3.30.1120.10 502 594 1.0E-11 T 28-03-2018 AM393_RS03490 124f64c613d6d2b2bff6a2130129694d 622 Pfam PF00884 Sulfatase 61 433 7.9E-42 T 28-03-2018 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 AM393_RS03490 124f64c613d6d2b2bff6a2130129694d 622 SUPERFAMILY SSF53649 279 478 2.42E-84 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AM393_RS03490 124f64c613d6d2b2bff6a2130129694d 622 SUPERFAMILY SSF53649 517 588 2.42E-84 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AM393_RS03490 124f64c613d6d2b2bff6a2130129694d 622 SUPERFAMILY SSF53649 59 251 2.42E-84 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AM393_RS24780 a8266e26ea22787aac9ab2431b90019c 571 Gene3D G3DSA:3.40.50.300 1 279 1.4E-45 T 28-03-2018 AM393_RS24780 a8266e26ea22787aac9ab2431b90019c 571 ProSitePatterns PS00211 ABC transporters family signature. 415 429 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS24780 a8266e26ea22787aac9ab2431b90019c 571 SMART SM00382 29 205 2.5E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS24780 a8266e26ea22787aac9ab2431b90019c 571 SMART SM00382 322 487 1.2E-6 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS24780 a8266e26ea22787aac9ab2431b90019c 571 Pfam PF00005 ABC transporter 21 153 1.6E-25 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS24780 a8266e26ea22787aac9ab2431b90019c 571 Pfam PF00005 ABC transporter 320 443 9.7E-13 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS24780 a8266e26ea22787aac9ab2431b90019c 571 SUPERFAMILY SSF52540 320 503 1.26E-31 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS24780 a8266e26ea22787aac9ab2431b90019c 571 Gene3D G3DSA:3.40.50.300 318 570 9.4E-32 T 28-03-2018 AM393_RS24780 a8266e26ea22787aac9ab2431b90019c 571 SUPERFAMILY SSF52540 18 203 5.5E-42 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS06670 850cc7b4d108c075d0a92f80cced4b1b 507 SUPERFAMILY SSF49899 309 491 2.69E-22 T 28-03-2018 IPR013320 Concanavalin A-like lectin/glucanase domain AM393_RS06670 850cc7b4d108c075d0a92f80cced4b1b 507 Pfam PF04616 Glycosyl hydrolases family 43 6 276 1.8E-61 T 28-03-2018 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 AM393_RS06670 850cc7b4d108c075d0a92f80cced4b1b 507 SUPERFAMILY SSF75005 6 293 5.0E-77 T 28-03-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain AM393_RS06670 850cc7b4d108c075d0a92f80cced4b1b 507 Gene3D G3DSA:2.60.120.200 306 505 3.6E-30 T 28-03-2018 AM393_RS06670 850cc7b4d108c075d0a92f80cced4b1b 507 Gene3D G3DSA:2.115.10.20 2 287 2.7E-56 T 28-03-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain AM393_RS22885 37384eda7634d583145fd2fbf09b71b5 392 SUPERFAMILY SSF51182 1 375 1.44E-101 T 28-03-2018 IPR011051 RmlC-like cupin domain AM393_RS22885 37384eda7634d583145fd2fbf09b71b5 392 Gene3D G3DSA:2.60.120.10 1 295 1.6E-77 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AM393_RS22885 37384eda7634d583145fd2fbf09b71b5 392 Gene3D G3DSA:2.60.120.10 296 391 5.1E-22 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AM393_RS22885 37384eda7634d583145fd2fbf09b71b5 392 PRINTS PR00714 Phosphomannose isomerase type I signature 81 102 1.8E-73 T 28-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 AM393_RS22885 37384eda7634d583145fd2fbf09b71b5 392 PRINTS PR00714 Phosphomannose isomerase type I signature 255 274 1.8E-73 T 28-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 AM393_RS22885 37384eda7634d583145fd2fbf09b71b5 392 PRINTS PR00714 Phosphomannose isomerase type I signature 274 293 1.8E-73 T 28-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 AM393_RS22885 37384eda7634d583145fd2fbf09b71b5 392 PRINTS PR00714 Phosphomannose isomerase type I signature 126 149 1.8E-73 T 28-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 AM393_RS22885 37384eda7634d583145fd2fbf09b71b5 392 PRINTS PR00714 Phosphomannose isomerase type I signature 220 235 1.8E-73 T 28-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 AM393_RS22885 37384eda7634d583145fd2fbf09b71b5 392 PRINTS PR00714 Phosphomannose isomerase type I signature 236 255 1.8E-73 T 28-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 AM393_RS22885 37384eda7634d583145fd2fbf09b71b5 392 PRINTS PR00714 Phosphomannose isomerase type I signature 32 47 1.8E-73 T 28-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 AM393_RS22885 37384eda7634d583145fd2fbf09b71b5 392 PRINTS PR00714 Phosphomannose isomerase type I signature 4 22 1.8E-73 T 28-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 AM393_RS22885 37384eda7634d583145fd2fbf09b71b5 392 ProSitePatterns PS00966 Phosphomannose isomerase type I signature 2. 255 280 - T 28-03-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 AM393_RS22885 37384eda7634d583145fd2fbf09b71b5 392 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 4 382 2.5E-124 T 28-03-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 AM393_RS22885 37384eda7634d583145fd2fbf09b71b5 392 Pfam PF01238 Phosphomannose isomerase type I 1 356 7.1E-108 T 28-03-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 AM393_RS22885 37384eda7634d583145fd2fbf09b71b5 392 ProSitePatterns PS00965 Phosphomannose isomerase type I signature 1. 126 134 - T 28-03-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 AM393_RS22885 37384eda7634d583145fd2fbf09b71b5 392 PIRSF PIRSF001480 1 392 1.0E-109 T 28-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 AM393_RS11465 1f3713d4d522531ac8e5e996e42f8787 206 TIGRFAM TIGR00949 2A76: homoserine/Threonine efflux protein 18 202 3.6E-67 T 28-03-2018 IPR004778 Homoserine/Threonine efflux protein GO:0016021 AM393_RS11465 1f3713d4d522531ac8e5e996e42f8787 206 PIRSF PIRSF006324 1 206 3.3E-41 T 28-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AM393_RS11465 1f3713d4d522531ac8e5e996e42f8787 206 Pfam PF01810 LysE type translocator 14 205 1.9E-54 T 28-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AM393_RS13185 9c521a9a30b832961e288de4d213deb2 435 ProSitePatterns PS01324 Glycosyl hydrolases family 4 signature. 141 171 - T 28-03-2018 IPR019802 Glycoside hydrolase, family 4, conserved site GO:0004553|GO:0005975 AM393_RS13185 9c521a9a30b832961e288de4d213deb2 435 Gene3D G3DSA:3.40.50.720 1 157 4.4E-25 T 28-03-2018 AM393_RS13185 9c521a9a30b832961e288de4d213deb2 435 SUPERFAMILY SSF56327 172 434 1.01E-87 T 28-03-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 AM393_RS13185 9c521a9a30b832961e288de4d213deb2 435 Gene3D G3DSA:3.90.110.10 158 434 2.9E-90 T 28-03-2018 AM393_RS13185 9c521a9a30b832961e288de4d213deb2 435 SUPERFAMILY SSF51735 4 169 1.44E-46 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS13185 9c521a9a30b832961e288de4d213deb2 435 PRINTS PR00732 Glycosyl hydrolase family 4 signature 5 20 9.8E-43 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AM393_RS13185 9c521a9a30b832961e288de4d213deb2 435 PRINTS PR00732 Glycosyl hydrolase family 4 signature 112 132 9.8E-43 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AM393_RS13185 9c521a9a30b832961e288de4d213deb2 435 PRINTS PR00732 Glycosyl hydrolase family 4 signature 141 158 9.8E-43 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AM393_RS13185 9c521a9a30b832961e288de4d213deb2 435 PRINTS PR00732 Glycosyl hydrolase family 4 signature 166 177 9.8E-43 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AM393_RS13185 9c521a9a30b832961e288de4d213deb2 435 PRINTS PR00732 Glycosyl hydrolase family 4 signature 77 93 9.8E-43 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AM393_RS13185 9c521a9a30b832961e288de4d213deb2 435 PRINTS PR00732 Glycosyl hydrolase family 4 signature 98 111 9.8E-43 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AM393_RS13185 9c521a9a30b832961e288de4d213deb2 435 PRINTS PR00732 Glycosyl hydrolase family 4 signature 192 204 9.8E-43 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AM393_RS13185 9c521a9a30b832961e288de4d213deb2 435 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 196 410 3.4E-49 T 28-03-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 AM393_RS13185 9c521a9a30b832961e288de4d213deb2 435 Pfam PF02056 Family 4 glycosyl hydrolase 5 185 1.5E-52 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AM393_RS25020 4293cb2bcd753d3c3002b408995e8959 292 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 49 275 1.8E-31 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM393_RS25020 4293cb2bcd753d3c3002b408995e8959 292 Gene3D G3DSA:3.40.190.10 147 236 8.9E-12 T 28-03-2018 AM393_RS25020 4293cb2bcd753d3c3002b408995e8959 292 SMART SM00062 48 277 1.9E-16 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM393_RS25020 4293cb2bcd753d3c3002b408995e8959 292 SUPERFAMILY SSF53850 45 274 1.36E-37 T 28-03-2018 AM393_RS25020 4293cb2bcd753d3c3002b408995e8959 292 Gene3D G3DSA:3.40.190.10 42 146 3.5E-15 T 28-03-2018 AM393_RS24545 9a12b7c94baf6181c3879c8b08828f16 92 Hamap MF_00655 Coenzyme PQQ synthesis protein D [pqqD]. 1 88 25.184 T 28-03-2018 IPR022479 Coenzyme PQQ synthesis D, bacteria GO:0018189|GO:0048038 AM393_RS24545 9a12b7c94baf6181c3879c8b08828f16 92 Pfam PF05402 Coenzyme PQQ synthesis protein D (PqqD) 24 86 1.4E-14 T 28-03-2018 IPR008792 Coenzyme PQQ synthesis D AM393_RS24545 9a12b7c94baf6181c3879c8b08828f16 92 TIGRFAM TIGR03859 PQQ_PqqD: coenzyme PQQ biosynthesis protein PqqD 8 86 9.9E-35 T 28-03-2018 IPR022479 Coenzyme PQQ synthesis D, bacteria GO:0018189|GO:0048038 AM393_RS15960 1b9102117de6e2315e59ee05f4aeee6c 272 Gene3D G3DSA:3.40.50.300 20 270 7.3E-79 T 28-03-2018 AM393_RS15960 1b9102117de6e2315e59ee05f4aeee6c 272 SUPERFAMILY SSF52540 24 258 1.66E-78 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS15960 1b9102117de6e2315e59ee05f4aeee6c 272 PIRSF PIRSF039085 20 264 4.3E-102 T 28-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 AM393_RS15960 1b9102117de6e2315e59ee05f4aeee6c 272 ProSitePatterns PS00211 ABC transporters family signature. 160 174 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS15960 1b9102117de6e2315e59ee05f4aeee6c 272 SMART SM00382 48 236 1.5E-20 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS15960 1b9102117de6e2315e59ee05f4aeee6c 272 Pfam PF00005 ABC transporter 39 188 9.2E-38 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS04340 6e6e0caa65d8a4441166e184629d4c70 171 SUPERFAMILY SSF63411 4 162 3.75E-66 T 28-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AM393_RS04340 6e6e0caa65d8a4441166e184629d4c70 171 ProDom PD013172 LYASE SYNTHESIS LUXS AUTOINDUCER-2 PRODUCTION AUTOINDUCER S-RIBOSYLHOMOCYSTEINE AI-2 QUORUM SENSING 9 155 2.0E-80 T 28-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AM393_RS04340 6e6e0caa65d8a4441166e184629d4c70 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 49 67 3.1E-50 T 28-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AM393_RS04340 6e6e0caa65d8a4441166e184629d4c70 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 28 46 3.1E-50 T 28-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AM393_RS04340 6e6e0caa65d8a4441166e184629d4c70 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 121 140 3.1E-50 T 28-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AM393_RS04340 6e6e0caa65d8a4441166e184629d4c70 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 5 23 3.1E-50 T 28-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AM393_RS04340 6e6e0caa65d8a4441166e184629d4c70 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 77 95 3.1E-50 T 28-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AM393_RS04340 6e6e0caa65d8a4441166e184629d4c70 171 Gene3D G3DSA:3.30.1360.80 3 161 5.9E-64 T 28-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AM393_RS04340 6e6e0caa65d8a4441166e184629d4c70 171 Pfam PF02664 S-Ribosylhomocysteinase (LuxS) 4 152 8.0E-62 T 28-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AM393_RS04340 6e6e0caa65d8a4441166e184629d4c70 171 PIRSF PIRSF006160 1 162 2.1E-65 T 28-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AM393_RS04340 6e6e0caa65d8a4441166e184629d4c70 171 Hamap MF_00091 S-ribosylhomocysteine lyase [luxS]. 1 159 35.577 T 28-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AM393_RS26760 a24072e38ffd5ccca6257388df9721ce 1355 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 404 684 2.3E-44 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS26760 a24072e38ffd5ccca6257388df9721ce 1355 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 272 7.6E-48 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS26760 a24072e38ffd5ccca6257388df9721ce 1355 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 404 1197 0.0 T 28-03-2018 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 AM393_RS26760 a24072e38ffd5ccca6257388df9721ce 1355 Gene3D G3DSA:2.102.10.10 1238 1352 2.1E-17 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AM393_RS26760 a24072e38ffd5ccca6257388df9721ce 1355 Gene3D G3DSA:3.50.50.60 382 499 7.0E-7 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS26760 a24072e38ffd5ccca6257388df9721ce 1355 Gene3D G3DSA:3.90.480.10 862 1025 2.0E-9 T 28-03-2018 AM393_RS26760 a24072e38ffd5ccca6257388df9721ce 1355 SUPERFAMILY SSF51905 547 706 8.39E-25 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS26760 a24072e38ffd5ccca6257388df9721ce 1355 SUPERFAMILY SSF50022 1242 1345 2.26E-31 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AM393_RS26760 a24072e38ffd5ccca6257388df9721ce 1355 Pfam PF13806 Rieske-like [2Fe-2S] domain 1243 1343 2.0E-29 T 28-03-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 AM393_RS26760 a24072e38ffd5ccca6257388df9721ce 1355 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 1028 1166 1.0E-17 T 28-03-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM393_RS26760 a24072e38ffd5ccca6257388df9721ce 1355 SUPERFAMILY SSF56014 1029 1201 4.97E-49 T 28-03-2018 AM393_RS26760 a24072e38ffd5ccca6257388df9721ce 1355 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 956 1018 2.4E-10 T 28-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM393_RS26760 a24072e38ffd5ccca6257388df9721ce 1355 Gene3D G3DSA:3.50.50.60 244 301 2.2E-5 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS26760 a24072e38ffd5ccca6257388df9721ce 1355 Gene3D G3DSA:3.50.50.60 643 708 1.5E-6 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS26760 a24072e38ffd5ccca6257388df9721ce 1355 Gene3D G3DSA:3.50.50.60 120 243 1.3E-29 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS26760 a24072e38ffd5ccca6257388df9721ce 1355 Gene3D G3DSA:3.30.413.10 1026 1197 8.6E-39 T 28-03-2018 AM393_RS26760 a24072e38ffd5ccca6257388df9721ce 1355 Gene3D G3DSA:3.50.50.60 500 639 7.6E-28 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS26760 a24072e38ffd5ccca6257388df9721ce 1355 PRINTS PR00397 Sirohaem Fe-binding site signature 1075 1093 2.5E-6 T 28-03-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM393_RS26760 a24072e38ffd5ccca6257388df9721ce 1355 PRINTS PR00397 Sirohaem Fe-binding site signature 1032 1050 2.5E-6 T 28-03-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM393_RS26760 a24072e38ffd5ccca6257388df9721ce 1355 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 1075 1091 - T 28-03-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM393_RS26760 a24072e38ffd5ccca6257388df9721ce 1355 Pfam PF04324 BFD-like [2Fe-2S] binding domain 819 867 9.8E-11 T 28-03-2018 IPR007419 BFD-like [2Fe-2S]-binding domain AM393_RS26760 a24072e38ffd5ccca6257388df9721ce 1355 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 1243 1344 1.4E-32 T 28-03-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 AM393_RS26760 a24072e38ffd5ccca6257388df9721ce 1355 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 223 239 7.0E-15 T 28-03-2018 AM393_RS26760 a24072e38ffd5ccca6257388df9721ce 1355 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 7.0E-15 T 28-03-2018 AM393_RS26760 a24072e38ffd5ccca6257388df9721ce 1355 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 142 160 7.0E-15 T 28-03-2018 AM393_RS26760 a24072e38ffd5ccca6257388df9721ce 1355 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 248 270 7.0E-15 T 28-03-2018 AM393_RS26760 a24072e38ffd5ccca6257388df9721ce 1355 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 100 118 7.0E-15 T 28-03-2018 AM393_RS26760 a24072e38ffd5ccca6257388df9721ce 1355 SUPERFAMILY SSF51905 143 296 7.07E-27 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS26760 a24072e38ffd5ccca6257388df9721ce 1355 Gene3D G3DSA:3.50.50.60 1 119 9.6E-9 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS26760 a24072e38ffd5ccca6257388df9721ce 1355 SUPERFAMILY SSF51905 400 588 4.03E-38 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS26760 a24072e38ffd5ccca6257388df9721ce 1355 SUPERFAMILY SSF55124 898 1037 1.23E-24 T 28-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM393_RS26760 a24072e38ffd5ccca6257388df9721ce 1355 Gene3D G3DSA:3.30.390.30 306 381 0.097 T 28-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 AM393_RS26760 a24072e38ffd5ccca6257388df9721ce 1355 SUPERFAMILY SSF51905 2 183 2.52E-39 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS04390 fc4f077eb268a92f29017fcaaedd8fa3 61 Pfam PF02599 Global regulator protein family 1 52 2.5E-27 T 28-03-2018 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 AM393_RS04390 fc4f077eb268a92f29017fcaaedd8fa3 61 Hamap MF_00167 Carbon storage regulator [csrA]. 1 61 20.514 T 28-03-2018 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 AM393_RS04390 fc4f077eb268a92f29017fcaaedd8fa3 61 SUPERFAMILY SSF117130 1 54 3.66E-21 T 28-03-2018 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 AM393_RS04390 fc4f077eb268a92f29017fcaaedd8fa3 61 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 57 2.0E-31 T 28-03-2018 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 AM393_RS04390 fc4f077eb268a92f29017fcaaedd8fa3 61 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 2.0E-20 T 28-03-2018 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 AM393_RS06650 60f58e50956a01e9b8bdf553f76a61c6 288 Gene3D G3DSA:3.40.30.10 45 143 4.4E-23 T 28-03-2018 AM393_RS06650 60f58e50956a01e9b8bdf553f76a61c6 288 SUPERFAMILY SSF52833 36 130 9.26E-17 T 28-03-2018 IPR012336 Thioredoxin-like fold AM393_RS06650 60f58e50956a01e9b8bdf553f76a61c6 288 SUPERFAMILY SSF47616 181 259 3.48E-31 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like AM393_RS06650 60f58e50956a01e9b8bdf553f76a61c6 288 SUPERFAMILY SSF47616 117 152 3.48E-31 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like AM393_RS06650 60f58e50956a01e9b8bdf553f76a61c6 288 Pfam PF02798 Glutathione S-transferase, N-terminal domain 65 127 1.1E-5 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AM393_RS06650 60f58e50956a01e9b8bdf553f76a61c6 288 Gene3D G3DSA:1.20.1050.10 176 285 5.3E-21 T 28-03-2018 AM393_RS06650 60f58e50956a01e9b8bdf553f76a61c6 288 Gene3D G3DSA:1.20.1050.10 144 175 1.1E-5 T 28-03-2018 AM393_RS06650 60f58e50956a01e9b8bdf553f76a61c6 288 Pfam PF13410 Glutathione S-transferase, C-terminal domain 174 244 3.3E-9 T 28-03-2018 AM393_RS23225 9c261102ca3b074b8c12aee6309bd5ca 202 Gene3D G3DSA:1.10.3480.10 6 202 6.7E-55 T 28-03-2018 IPR020945 DMSO/Nitrate reductase chaperone AM393_RS23225 9c261102ca3b074b8c12aee6309bd5ca 202 SUPERFAMILY SSF89155 8 201 7.85E-55 T 28-03-2018 IPR020945 DMSO/Nitrate reductase chaperone AM393_RS23225 9c261102ca3b074b8c12aee6309bd5ca 202 Pfam PF02613 Nitrate reductase delta subunit 59 161 5.9E-23 T 28-03-2018 IPR020945 DMSO/Nitrate reductase chaperone AM393_RS23225 9c261102ca3b074b8c12aee6309bd5ca 202 Hamap MF_00940 Tat proofreading chaperone DmsD [dmsD]. 2 202 41.272 T 28-03-2018 IPR028611 Tat proofreading chaperone DmsD GO:0005048 AM393_RS23225 9c261102ca3b074b8c12aee6309bd5ca 202 PIRSF PIRSF004690 2 202 4.8E-65 T 28-03-2018 IPR026269 Tat proofreading chaperone DmsD-type AM393_RS09550 e68bc9a8b9aa120301b1d19fe87af44d 257 Pfam PF00392 Bacterial regulatory proteins, gntR family 9 71 3.2E-21 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM393_RS09550 e68bc9a8b9aa120301b1d19fe87af44d 257 Pfam PF07729 FCD domain 100 222 1.3E-23 T 28-03-2018 IPR011711 GntR, C-terminal AM393_RS09550 e68bc9a8b9aa120301b1d19fe87af44d 257 SMART SM00345 12 71 1.8E-23 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM393_RS09550 e68bc9a8b9aa120301b1d19fe87af44d 257 SMART SM00895 100 224 3.2E-20 T 28-03-2018 IPR011711 GntR, C-terminal AM393_RS09550 e68bc9a8b9aa120301b1d19fe87af44d 257 SUPERFAMILY SSF46785 7 75 1.06E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS09550 e68bc9a8b9aa120301b1d19fe87af44d 257 Gene3D G3DSA:1.10.10.10 4 73 9.3E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS09550 e68bc9a8b9aa120301b1d19fe87af44d 257 Gene3D G3DSA:1.20.120.530 83 244 6.0E-31 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AM393_RS09550 e68bc9a8b9aa120301b1d19fe87af44d 257 SUPERFAMILY SSF48008 98 230 3.92E-27 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AM393_RS09550 e68bc9a8b9aa120301b1d19fe87af44d 257 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 1.3E-10 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM393_RS09550 e68bc9a8b9aa120301b1d19fe87af44d 257 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 1.3E-10 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM393_RS22750 85fad8d188c97acc321f46845c168f70 550 SUPERFAMILY SSF103473 277 448 8.63E-17 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS22750 85fad8d188c97acc321f46845c168f70 550 SUPERFAMILY SSF103473 37 227 8.63E-17 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS22750 85fad8d188c97acc321f46845c168f70 550 SUPERFAMILY SSF103473 508 535 8.63E-17 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS22750 85fad8d188c97acc321f46845c168f70 550 Pfam PF07690 Major Facilitator Superfamily 49 438 1.2E-8 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS22750 85fad8d188c97acc321f46845c168f70 550 Gene3D G3DSA:1.20.1250.20 32 228 1.3E-8 T 28-03-2018 AM393_RS22750 85fad8d188c97acc321f46845c168f70 550 Gene3D G3DSA:1.20.1250.20 286 546 3.4E-8 T 28-03-2018 AM393_RS12460 7459ccca5cd705184d2c65ce50fcbf69 312 Gene3D G3DSA:1.10.10.60 258 311 9.0E-14 T 28-03-2018 AM393_RS12460 7459ccca5cd705184d2c65ce50fcbf69 312 Pfam PF12833 Helix-turn-helix domain 221 298 4.8E-19 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM393_RS12460 7459ccca5cd705184d2c65ce50fcbf69 312 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 281 297 2.8E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM393_RS12460 7459ccca5cd705184d2c65ce50fcbf69 312 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 266 281 2.8E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM393_RS12460 7459ccca5cd705184d2c65ce50fcbf69 312 SUPERFAMILY SSF46689 200 248 4.93E-5 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS12460 7459ccca5cd705184d2c65ce50fcbf69 312 Gene3D G3DSA:2.60.120.10 31 257 2.0E-20 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AM393_RS12460 7459ccca5cd705184d2c65ce50fcbf69 312 SUPERFAMILY SSF46689 250 298 1.39E-11 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS12460 7459ccca5cd705184d2c65ce50fcbf69 312 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 251 293 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM393_RS12460 7459ccca5cd705184d2c65ce50fcbf69 312 SUPERFAMILY SSF51182 32 113 5.85E-8 T 28-03-2018 IPR011051 RmlC-like cupin domain AM393_RS12460 7459ccca5cd705184d2c65ce50fcbf69 312 SUPERFAMILY SSF47454 136 193 1.12E-9 T 28-03-2018 IPR008917 Transcription factor, Skn-1-like, DNA-binding domain GO:0003677|GO:0006355 AM393_RS12460 7459ccca5cd705184d2c65ce50fcbf69 312 SMART SM00342 214 297 1.9E-27 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM393_RS21535 676f59b2ee170b7c94e3efc02f6eac0d 178 Pfam PF14002 YniB-like protein 15 177 9.5E-80 T 28-03-2018 IPR025229 YniB-like protein AM393_RS21535 676f59b2ee170b7c94e3efc02f6eac0d 178 ProDom PD035714 MEMBRANE REGULATOR YNIB TRANSMEMBRANE YFEABCD YFEE PROBABLE LOCUS ESCHERICHIA ECS2432 1 178 4.0E-79 T 28-03-2018 AM393_RS12530 40f71051197899d317aa7858755511d1 671 TIGRFAM TIGR03938 deacetyl_PgaB: poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB 49 664 1.8E-275 T 28-03-2018 IPR023854 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB GO:0016810|GO:0042710 AM393_RS12530 40f71051197899d317aa7858755511d1 671 Pfam PF01522 Polysaccharide deacetylase 104 270 2.5E-25 T 28-03-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 AM393_RS12530 40f71051197899d317aa7858755511d1 671 SUPERFAMILY SSF88713 224 305 5.48E-35 T 28-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AM393_RS12530 40f71051197899d317aa7858755511d1 671 SUPERFAMILY SSF88713 66 196 5.48E-35 T 28-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AM393_RS12530 40f71051197899d317aa7858755511d1 671 Pfam PF14883 Hypothetical glycosyl hydrolase family 13 318 644 1.3E-147 T 28-03-2018 IPR032772 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB, C-terminal AM393_RS12530 40f71051197899d317aa7858755511d1 671 Gene3D G3DSA:3.20.20.370 69 491 4.5E-45 T 28-03-2018 AM393_RS02265 bc2a3384de8a468810fe2a89e8702982 396 TIGRFAM TIGR00695 uxuA: mannonate dehydratase 1 390 1.2E-206 T 28-03-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 AM393_RS02265 bc2a3384de8a468810fe2a89e8702982 396 Hamap MF_00106 Mannonate dehydratase [uxuA]. 1 396 223.203 T 28-03-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 AM393_RS02265 bc2a3384de8a468810fe2a89e8702982 396 Pfam PF03786 D-mannonate dehydratase (UxuA) 1 388 3.6E-154 T 28-03-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 AM393_RS02265 bc2a3384de8a468810fe2a89e8702982 396 SUPERFAMILY SSF51658 1 383 4.48E-76 T 28-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AM393_RS02265 bc2a3384de8a468810fe2a89e8702982 396 PIRSF PIRSF016049 1 393 2.8E-179 T 28-03-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 AM393_RS02265 bc2a3384de8a468810fe2a89e8702982 396 Gene3D G3DSA:3.20.20.150 1 393 1.2E-106 T 28-03-2018 AM393_RS13725 cd521ca2dfc75e5001def1a9620ce94c 355 Gene3D G3DSA:1.20.1600.10 176 313 9.4E-6 T 28-03-2018 AM393_RS13725 cd521ca2dfc75e5001def1a9620ce94c 355 Gene3D G3DSA:3.90.1170.30 15 106 4.5E-4 T 28-03-2018 AM393_RS13725 cd521ca2dfc75e5001def1a9620ce94c 355 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 58 78 1.3E-5 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AM393_RS13725 cd521ca2dfc75e5001def1a9620ce94c 355 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 327 342 1.3E-5 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AM393_RS13725 cd521ca2dfc75e5001def1a9620ce94c 355 Pfam PF13533 Biotin-lipoyl like 48 95 1.1E-11 T 28-03-2018 AM393_RS13725 cd521ca2dfc75e5001def1a9620ce94c 355 Pfam PF13437 HlyD family secretion protein 214 318 1.7E-11 T 28-03-2018 AM393_RS13725 cd521ca2dfc75e5001def1a9620ce94c 355 SUPERFAMILY SSF111369 40 130 6.15E-9 T 28-03-2018 AM393_RS13725 cd521ca2dfc75e5001def1a9620ce94c 355 SUPERFAMILY SSF111369 208 259 4.32E-5 T 28-03-2018 AM393_RS13725 cd521ca2dfc75e5001def1a9620ce94c 355 SUPERFAMILY SSF111369 117 179 4.32E-5 T 28-03-2018 AM393_RS13725 cd521ca2dfc75e5001def1a9620ce94c 355 Gene3D G3DSA:1.10.287.470 117 175 1.8E-9 T 28-03-2018 AM393_RS10920 d18f0c5e026d352613085786aa2901e4 281 SUPERFAMILY SSF46689 227 277 1.03E-12 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS10920 d18f0c5e026d352613085786aa2901e4 281 Pfam PF12833 Helix-turn-helix domain 198 276 9.1E-22 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM393_RS10920 d18f0c5e026d352613085786aa2901e4 281 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 243 258 5.3E-6 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM393_RS10920 d18f0c5e026d352613085786aa2901e4 281 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 258 274 5.3E-6 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM393_RS10920 d18f0c5e026d352613085786aa2901e4 281 SUPERFAMILY SSF51215 26 161 4.84E-13 T 28-03-2018 AM393_RS10920 d18f0c5e026d352613085786aa2901e4 281 Gene3D G3DSA:1.10.10.60 170 225 5.3E-8 T 28-03-2018 AM393_RS10920 d18f0c5e026d352613085786aa2901e4 281 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 228 270 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM393_RS10920 d18f0c5e026d352613085786aa2901e4 281 SMART SM00342 191 274 3.2E-29 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM393_RS10920 d18f0c5e026d352613085786aa2901e4 281 Pfam PF02311 AraC-like ligand binding domain 22 145 4.6E-20 T 28-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AM393_RS10920 d18f0c5e026d352613085786aa2901e4 281 Gene3D G3DSA:1.10.10.60 226 281 6.6E-14 T 28-03-2018 AM393_RS10920 d18f0c5e026d352613085786aa2901e4 281 Hamap MF_01533 HTH-type transcriptional activator RhaR [rhaR]. 1 281 47.913 T 28-03-2018 IPR023699 Transcription activator HTH, RhaR GO:0003700|GO:0005737|GO:0019299|GO:0045893 AM393_RS10920 d18f0c5e026d352613085786aa2901e4 281 Gene3D G3DSA:2.60.120.280 6 165 2.2E-17 T 28-03-2018 AM393_RS07805 6fae50debaf1b5d70e915d7b0bcc11bc 312 SUPERFAMILY SSF56327 146 311 3.86E-43 T 28-03-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 AM393_RS07805 6fae50debaf1b5d70e915d7b0bcc11bc 312 PIRSF PIRSF000102 1 309 2.2E-60 T 28-03-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 AM393_RS07805 6fae50debaf1b5d70e915d7b0bcc11bc 312 ProSitePatterns PS00068 Malate dehydrogenase active site signature. 146 158 - T 28-03-2018 IPR001252 Malate dehydrogenase, active site GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263 AM393_RS07805 6fae50debaf1b5d70e915d7b0bcc11bc 312 SUPERFAMILY SSF51735 1 145 8.73E-39 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS07805 6fae50debaf1b5d70e915d7b0bcc11bc 312 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 147 309 1.6E-51 T 28-03-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 AM393_RS07805 6fae50debaf1b5d70e915d7b0bcc11bc 312 Hamap MF_01516 Malate dehydrogenase [mdh]. 1 311 60.375 T 28-03-2018 IPR023958 Malate dehydrogenase, type 1, bacterial GO:0006099|GO:0030060|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 AM393_RS07805 6fae50debaf1b5d70e915d7b0bcc11bc 312 Gene3D G3DSA:3.40.50.720 2 147 4.7E-40 T 28-03-2018 AM393_RS07805 6fae50debaf1b5d70e915d7b0bcc11bc 312 TIGRFAM TIGR01772 MDH_euk_gproteo: malate dehydrogenase, NAD-dependent 2 311 5.8E-140 T 28-03-2018 IPR010097 Malate dehydrogenase, type 1 GO:0006099|GO:0030060 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263|Reactome: R-HSA-71403 AM393_RS07805 6fae50debaf1b5d70e915d7b0bcc11bc 312 Gene3D G3DSA:3.90.110.10 148 312 4.9E-44 T 28-03-2018 AM393_RS07805 6fae50debaf1b5d70e915d7b0bcc11bc 312 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 1 145 6.1E-46 T 28-03-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 AM393_RS21300 73911598af8f31530c8db8750d833846 278 PIRSF PIRSF001359 1 277 1.1E-76 T 28-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AM393_RS21300 73911598af8f31530c8db8750d833846 278 SUPERFAMILY SSF51569 2 277 1.33E-82 T 28-03-2018 AM393_RS21300 73911598af8f31530c8db8750d833846 278 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 277 2.8E-95 T 28-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AM393_RS21300 73911598af8f31530c8db8750d833846 278 Pfam PF01116 Fructose-bisphosphate aldolase class-II 10 276 5.1E-88 T 28-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AM393_RS21300 73911598af8f31530c8db8750d833846 278 Gene3D G3DSA:3.20.20.70 2 278 4.2E-81 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM393_RS13395 a11e06e4d62273c530f082b291c542b6 299 Gene3D G3DSA:3.20.20.150 1 298 1.7E-57 T 28-03-2018 AM393_RS13395 a11e06e4d62273c530f082b291c542b6 299 Pfam PF01261 Xylose isomerase-like TIM barrel 36 251 9.6E-27 T 28-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AM393_RS13395 a11e06e4d62273c530f082b291c542b6 299 TIGRFAM TIGR04379 myo_inos_iolE: myo-inosose-2 dehydratase 5 296 4.0E-115 T 28-03-2018 IPR030823 IolE/MocC family KEGG: 00562+4.2.1.44 AM393_RS13395 a11e06e4d62273c530f082b291c542b6 299 SUPERFAMILY SSF51658 7 296 7.05E-59 T 28-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AM393_RS13395 a11e06e4d62273c530f082b291c542b6 299 Hamap MF_01672 Inosose dehydratase [iolE]. 1 299 57.104 T 28-03-2018 IPR023952 Inosose dehydratase GO:0019310|GO:0030145|GO:0050114 KEGG: 00562+4.2.1.44 AM393_RS02330 bafa2670e1b01cb368b852d1020defce 585 SUPERFAMILY SSF57829 424 466 6.77E-7 T 28-03-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 AM393_RS02330 bafa2670e1b01cb368b852d1020defce 585 Gene3D G3DSA:3.40.50.300 1 164 1.6E-27 T 28-03-2018 AM393_RS02330 bafa2670e1b01cb368b852d1020defce 585 SMART SM00490 262 345 5.8E-9 T 28-03-2018 IPR001650 Helicase, C-terminal AM393_RS02330 bafa2670e1b01cb368b852d1020defce 585 Pfam PF04851 Type III restriction enzyme, res subunit 3 154 6.0E-23 T 28-03-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 AM393_RS02330 bafa2670e1b01cb368b852d1020defce 585 SUPERFAMILY SSF52540 50 169 2.39E-37 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS02330 bafa2670e1b01cb368b852d1020defce 585 SUPERFAMILY SSF52540 237 363 2.39E-37 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS02330 bafa2670e1b01cb368b852d1020defce 585 Pfam PF00271 Helicase conserved C-terminal domain 241 343 1.1E-13 T 28-03-2018 IPR001650 Helicase, C-terminal AM393_RS02330 bafa2670e1b01cb368b852d1020defce 585 Gene3D G3DSA:3.40.50.300 226 359 3.8E-18 T 28-03-2018 AM393_RS02330 bafa2670e1b01cb368b852d1020defce 585 SMART SM00487 1 185 9.8E-17 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AM393_RS12345 3dbf3a2df577eff4746190e947cd52e2 242 SMART SM00862 155 231 3.8E-20 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM393_RS12345 3dbf3a2df577eff4746190e947cd52e2 242 SUPERFAMILY SSF46894 134 232 3.4E-25 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM393_RS12345 3dbf3a2df577eff4746190e947cd52e2 242 SMART SM00448 3 115 4.5E-32 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM393_RS12345 3dbf3a2df577eff4746190e947cd52e2 242 Gene3D G3DSA:1.10.10.10 128 238 5.4E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS12345 3dbf3a2df577eff4746190e947cd52e2 242 SUPERFAMILY SSF52172 2 125 6.55E-33 T 28-03-2018 IPR011006 CheY-like superfamily AM393_RS12345 3dbf3a2df577eff4746190e947cd52e2 242 Gene3D G3DSA:3.40.50.2300 1 127 1.1E-30 T 28-03-2018 AM393_RS12345 3dbf3a2df577eff4746190e947cd52e2 242 Pfam PF00072 Response regulator receiver domain 5 115 2.0E-23 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM393_RS12345 3dbf3a2df577eff4746190e947cd52e2 242 Pfam PF00486 Transcriptional regulatory protein, C terminal 156 231 1.8E-21 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM393_RS04875 b873d065d95e7cf8f3fd00c4a42dd5aa 599 PRINTS PR00369 Flavodoxin signature 65 78 1.0E-14 T 28-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AM393_RS04875 b873d065d95e7cf8f3fd00c4a42dd5aa 599 PRINTS PR00369 Flavodoxin signature 169 188 1.0E-14 T 28-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AM393_RS04875 b873d065d95e7cf8f3fd00c4a42dd5aa 599 PRINTS PR00369 Flavodoxin signature 113 124 1.0E-14 T 28-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AM393_RS04875 b873d065d95e7cf8f3fd00c4a42dd5aa 599 PRINTS PR00369 Flavodoxin signature 145 155 1.0E-14 T 28-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AM393_RS04875 b873d065d95e7cf8f3fd00c4a42dd5aa 599 SUPERFAMILY SSF52343 444 599 2.62E-52 T 28-03-2018 AM393_RS04875 b873d065d95e7cf8f3fd00c4a42dd5aa 599 Pfam PF00258 Flavodoxin 67 195 2.6E-32 T 28-03-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 AM393_RS04875 b873d065d95e7cf8f3fd00c4a42dd5aa 599 Gene3D G3DSA:2.40.30.10 221 438 1.2E-47 T 28-03-2018 AM393_RS04875 b873d065d95e7cf8f3fd00c4a42dd5aa 599 SUPERFAMILY SSF52218 63 209 6.98E-44 T 28-03-2018 IPR029039 Flavoprotein-like domain AM393_RS04875 b873d065d95e7cf8f3fd00c4a42dd5aa 599 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 548 556 5.1E-30 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AM393_RS04875 b873d065d95e7cf8f3fd00c4a42dd5aa 599 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 386 393 5.1E-30 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AM393_RS04875 b873d065d95e7cf8f3fd00c4a42dd5aa 599 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 494 505 5.1E-30 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AM393_RS04875 b873d065d95e7cf8f3fd00c4a42dd5aa 599 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 456 475 5.1E-30 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AM393_RS04875 b873d065d95e7cf8f3fd00c4a42dd5aa 599 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 270 280 5.1E-30 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AM393_RS04875 b873d065d95e7cf8f3fd00c4a42dd5aa 599 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 481 490 5.1E-30 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AM393_RS04875 b873d065d95e7cf8f3fd00c4a42dd5aa 599 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 419 428 5.1E-30 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AM393_RS04875 b873d065d95e7cf8f3fd00c4a42dd5aa 599 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 525 541 5.1E-30 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AM393_RS04875 b873d065d95e7cf8f3fd00c4a42dd5aa 599 TIGRFAM TIGR01931 cysJ: sulfite reductase [NADPH] flavoprotein, alpha-component 10 599 3.1E-283 T 28-03-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM393_RS04875 b873d065d95e7cf8f3fd00c4a42dd5aa 599 Gene3D G3DSA:3.40.50.80 442 598 3.2E-36 T 28-03-2018 AM393_RS04875 b873d065d95e7cf8f3fd00c4a42dd5aa 599 Pfam PF00667 FAD binding domain 230 424 1.3E-25 T 28-03-2018 IPR003097 FAD-binding, type 1 GO:0016491|GO:0055114 AM393_RS04875 b873d065d95e7cf8f3fd00c4a42dd5aa 599 Hamap MF_01541 Sulfite reductase [NADPH] flavoprotein alpha-component [cysJ]. 2 599 52.738 T 28-03-2018 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM393_RS04875 b873d065d95e7cf8f3fd00c4a42dd5aa 599 SUPERFAMILY SSF63380 227 446 4.08E-64 T 28-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AM393_RS04875 b873d065d95e7cf8f3fd00c4a42dd5aa 599 Gene3D G3DSA:3.40.50.360 45 220 2.2E-39 T 28-03-2018 IPR029039 Flavoprotein-like domain AM393_RS04875 b873d065d95e7cf8f3fd00c4a42dd5aa 599 PIRSF PIRSF000207 1 599 5.4E-284 T 28-03-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM393_RS04875 b873d065d95e7cf8f3fd00c4a42dd5aa 599 Pfam PF00175 Oxidoreductase NAD-binding domain 457 563 2.3E-21 T 28-03-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AM393_RS23135 1b61cdb2d6fd16955beeda4733ec2def 277 SUPERFAMILY SSF52096 5 222 1.8E-37 T 28-03-2018 IPR029045 ClpP/crotonase-like domain AM393_RS23135 1b61cdb2d6fd16955beeda4733ec2def 277 Gene3D G3DSA:3.90.226.10 3 276 2.2E-40 T 28-03-2018 AM393_RS23135 1b61cdb2d6fd16955beeda4733ec2def 277 TIGRFAM TIGR03133 malonate_beta: biotin-independent malonate decarboxylase, beta subunit 5 275 2.3E-115 T 28-03-2018 IPR017556 Biotin-independent malonate decarboxylase, beta subunit GO:0016831|GO:0044262 MetaCyc: PWY-6060 AM393_RS23135 1b61cdb2d6fd16955beeda4733ec2def 277 Pfam PF01039 Carboxyl transferase domain 12 231 4.0E-15 T 28-03-2018 IPR034733 Acetyl-CoA carboxylase KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388|Reactome: R-HSA-196780 AM393_RS27450 67f745ccb5eb794e4e36d479c13beb00 605 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 5 31 8.4E-5 T 28-03-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AM393_RS27450 67f745ccb5eb794e4e36d479c13beb00 605 Pfam PF00394 Multicopper oxidase 172 349 5.8E-38 T 28-03-2018 IPR001117 Multicopper oxidase, type 1 GO:0055114 AM393_RS27450 67f745ccb5eb794e4e36d479c13beb00 605 TIGRFAM TIGR01480 copper_res_A: copper-resistance protein, CopA family 5 604 2.8E-300 T 28-03-2018 IPR006376 Copper-resistance protein CopA GO:0005507|GO:0042597 AM393_RS27450 67f745ccb5eb794e4e36d479c13beb00 605 Gene3D G3DSA:2.60.40.420 168 375 8.5E-46 T 28-03-2018 IPR008972 Cupredoxin AM393_RS27450 67f745ccb5eb794e4e36d479c13beb00 605 Pfam PF07732 Multicopper oxidase 52 163 4.7E-40 T 28-03-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 AM393_RS27450 67f745ccb5eb794e4e36d479c13beb00 605 ProSitePatterns PS00080 Multicopper oxidases signature 2. 586 597 - T 28-03-2018 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 AM393_RS27450 67f745ccb5eb794e4e36d479c13beb00 605 Gene3D G3DSA:2.60.40.420 402 604 1.1E-50 T 28-03-2018 IPR008972 Cupredoxin AM393_RS27450 67f745ccb5eb794e4e36d479c13beb00 605 SUPERFAMILY SSF49503 166 372 7.18E-59 T 28-03-2018 IPR008972 Cupredoxin AM393_RS27450 67f745ccb5eb794e4e36d479c13beb00 605 Pfam PF07731 Multicopper oxidase 492 604 1.7E-25 T 28-03-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 AM393_RS27450 67f745ccb5eb794e4e36d479c13beb00 605 SUPERFAMILY SSF49503 18 187 1.73E-38 T 28-03-2018 IPR008972 Cupredoxin AM393_RS27450 67f745ccb5eb794e4e36d479c13beb00 605 ProSitePatterns PS00079 Multicopper oxidases signature 1. 581 601 - T 28-03-2018 IPR033138 Multicopper oxidases, conserved site AM393_RS27450 67f745ccb5eb794e4e36d479c13beb00 605 SUPERFAMILY SSF49503 455 603 1.46E-37 T 28-03-2018 IPR008972 Cupredoxin AM393_RS27450 67f745ccb5eb794e4e36d479c13beb00 605 Gene3D G3DSA:2.60.40.420 43 167 2.7E-31 T 28-03-2018 IPR008972 Cupredoxin AM393_RS08260 9cd57dfeb1fee8b6c72fa6e6176d10d3 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 26.005 T 28-03-2018 IPR023036 Ribosomal protein S14, bacterial/plastid AM393_RS08260 9cd57dfeb1fee8b6c72fa6e6176d10d3 101 SUPERFAMILY SSF57716 2 101 5.63E-37 T 28-03-2018 AM393_RS08260 9cd57dfeb1fee8b6c72fa6e6176d10d3 101 Pfam PF00253 Ribosomal protein S14p/S29e 47 100 1.0E-26 T 28-03-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM393_RS08260 9cd57dfeb1fee8b6c72fa6e6176d10d3 101 ProSitePatterns PS00527 Ribosomal protein S14 signature. 63 85 - T 28-03-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM393_RS08260 9cd57dfeb1fee8b6c72fa6e6176d10d3 101 Gene3D G3DSA:4.10.830.10 1 101 3.4E-33 T 28-03-2018 AM393_RS23065 a3639a6c00f1b2db8c45c7762786790b 503 Pfam PF00939 Sodium:sulfate symporter transmembrane region 26 502 2.1E-149 T 28-03-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 AM393_RS23065 a3639a6c00f1b2db8c45c7762786790b 503 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 41 498 1.9E-148 T 28-03-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 AM393_RS23065 a3639a6c00f1b2db8c45c7762786790b 503 PIRSF PIRSF002457 12 503 1.2E-135 T 28-03-2018 IPR030676 Citrate carrier CitT-related AM393_RS14140 2f1da05ef5d8493dc3e415a832de614b 348 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 186 345 1.8E-46 T 28-03-2018 IPR000160 GGDEF domain AM393_RS14140 2f1da05ef5d8493dc3e415a832de614b 348 SMART SM00267 178 348 4.5E-50 T 28-03-2018 IPR000160 GGDEF domain AM393_RS14140 2f1da05ef5d8493dc3e415a832de614b 348 Pfam PF00990 Diguanylate cyclase, GGDEF domain 190 343 9.7E-46 T 28-03-2018 IPR000160 GGDEF domain AM393_RS14140 2f1da05ef5d8493dc3e415a832de614b 348 Gene3D G3DSA:3.30.70.270 172 347 2.5E-49 T 28-03-2018 AM393_RS14140 2f1da05ef5d8493dc3e415a832de614b 348 SUPERFAMILY SSF55073 194 345 2.28E-44 T 28-03-2018 IPR029787 Nucleotide cyclase AM393_RS22675 afb143f0c64d5e6578d94ec7ed446d5a 356 Pfam PF00175 Oxidoreductase NAD-binding domain 118 225 3.5E-18 T 28-03-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AM393_RS22675 afb143f0c64d5e6578d94ec7ed446d5a 356 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 212 220 8.0E-8 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AM393_RS22675 afb143f0c64d5e6578d94ec7ed446d5a 356 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 36 46 8.0E-8 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AM393_RS22675 afb143f0c64d5e6578d94ec7ed446d5a 356 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 116 135 8.0E-8 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AM393_RS22675 afb143f0c64d5e6578d94ec7ed446d5a 356 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 55 62 8.0E-8 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AM393_RS22675 afb143f0c64d5e6578d94ec7ed446d5a 356 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 141 150 8.0E-8 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AM393_RS22675 afb143f0c64d5e6578d94ec7ed446d5a 356 SUPERFAMILY SSF52343 94 242 6.81E-35 T 28-03-2018 AM393_RS22675 afb143f0c64d5e6578d94ec7ed446d5a 356 PRINTS PR00406 Cytochrome B5 reductase signature 212 220 1.9E-7 T 28-03-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 AM393_RS22675 afb143f0c64d5e6578d94ec7ed446d5a 356 PRINTS PR00406 Cytochrome B5 reductase signature 91 105 1.9E-7 T 28-03-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 AM393_RS22675 afb143f0c64d5e6578d94ec7ed446d5a 356 PRINTS PR00406 Cytochrome B5 reductase signature 116 135 1.9E-7 T 28-03-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 AM393_RS22675 afb143f0c64d5e6578d94ec7ed446d5a 356 SUPERFAMILY SSF63380 2 103 1.43E-22 T 28-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AM393_RS22675 afb143f0c64d5e6578d94ec7ed446d5a 356 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 270 342 1.8E-15 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AM393_RS22675 afb143f0c64d5e6578d94ec7ed446d5a 356 TIGRFAM TIGR02160 PA_CoA_Oxy5: phenylacetate-CoA oxygenase/reductase, PaaK subunit 4 351 8.7E-162 T 28-03-2018 IPR011884 Phenylacetate-CoA oxygenase/reductase, PaaK subunit GO:0010124 AM393_RS22675 afb143f0c64d5e6578d94ec7ed446d5a 356 Pfam PF00970 Oxidoreductase FAD-binding domain 7 105 8.2E-12 T 28-03-2018 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 AM393_RS22675 afb143f0c64d5e6578d94ec7ed446d5a 356 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 299 307 - T 28-03-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AM393_RS22675 afb143f0c64d5e6578d94ec7ed446d5a 356 Gene3D G3DSA:3.40.50.80 94 237 4.5E-32 T 28-03-2018 AM393_RS22675 afb143f0c64d5e6578d94ec7ed446d5a 356 SUPERFAMILY SSF54292 236 350 5.12E-28 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AM393_RS22675 afb143f0c64d5e6578d94ec7ed446d5a 356 Gene3D G3DSA:3.10.20.30 238 356 1.8E-29 T 28-03-2018 IPR012675 Beta-grasp domain AM393_RS22675 afb143f0c64d5e6578d94ec7ed446d5a 356 Gene3D G3DSA:2.40.30.10 1 93 6.6E-19 T 28-03-2018 AM393_RS00605 0f1e6311cf955412e4198f3c6ab70d99 686 SUPERFAMILY SSF53474 414 655 1.59E-41 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AM393_RS00605 0f1e6311cf955412e4198f3c6ab70d99 686 Gene3D G3DSA:2.130.10.120 72 397 1.0E-48 T 28-03-2018 AM393_RS00605 0f1e6311cf955412e4198f3c6ab70d99 686 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 3 404 3.4E-106 T 28-03-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 AM393_RS00605 0f1e6311cf955412e4198f3c6ab70d99 686 Pfam PF00326 Prolyl oligopeptidase family 463 675 9.3E-67 T 28-03-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 AM393_RS00605 0f1e6311cf955412e4198f3c6ab70d99 686 Gene3D G3DSA:3.40.50.1820 398 673 3.0E-27 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AM393_RS00605 0f1e6311cf955412e4198f3c6ab70d99 686 SUPERFAMILY SSF50993 2 407 8.37E-83 T 28-03-2018 AM393_RS00605 0f1e6311cf955412e4198f3c6ab70d99 686 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 446 464 4.1E-51 T 28-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AM393_RS00605 0f1e6311cf955412e4198f3c6ab70d99 686 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 472 496 4.1E-51 T 28-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AM393_RS00605 0f1e6311cf955412e4198f3c6ab70d99 686 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 606 628 4.1E-51 T 28-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AM393_RS00605 0f1e6311cf955412e4198f3c6ab70d99 686 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 588 603 4.1E-51 T 28-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AM393_RS00605 0f1e6311cf955412e4198f3c6ab70d99 686 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 530 550 4.1E-51 T 28-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AM393_RS00605 0f1e6311cf955412e4198f3c6ab70d99 686 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 500 519 4.1E-51 T 28-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AM393_RS18830 512440aacb2de163ac3754a1017b091e 382 TIGRFAM TIGR00131 gal_kin: galactokinase 5 382 4.0E-172 T 28-03-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 AM393_RS18830 512440aacb2de163ac3754a1017b091e 382 PRINTS PR00473 Galactokinase signature 92 103 5.9E-30 T 28-03-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 AM393_RS18830 512440aacb2de163ac3754a1017b091e 382 PRINTS PR00473 Galactokinase signature 27 45 5.9E-30 T 28-03-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 AM393_RS18830 512440aacb2de163ac3754a1017b091e 382 PRINTS PR00473 Galactokinase signature 112 130 5.9E-30 T 28-03-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 AM393_RS18830 512440aacb2de163ac3754a1017b091e 382 PRINTS PR00473 Galactokinase signature 263 277 5.9E-30 T 28-03-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 AM393_RS18830 512440aacb2de163ac3754a1017b091e 382 Pfam PF10509 Galactokinase galactose-binding signature 11 58 2.0E-21 T 28-03-2018 IPR019539 Galactokinase galactose-binding domain GO:0005534 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 AM393_RS18830 512440aacb2de163ac3754a1017b091e 382 PIRSF PIRSF000530 1 382 5.3E-126 T 28-03-2018 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 AM393_RS18830 512440aacb2de163ac3754a1017b091e 382 Gene3D G3DSA:3.30.230.10 2 206 1.3E-59 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AM393_RS18830 512440aacb2de163ac3754a1017b091e 382 Gene3D G3DSA:3.30.70.890 207 381 7.9E-59 T 28-03-2018 IPR013750 GHMP kinase, C-terminal domain AM393_RS18830 512440aacb2de163ac3754a1017b091e 382 Pfam PF00288 GHMP kinases N terminal domain 114 181 4.6E-14 T 28-03-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 AM393_RS18830 512440aacb2de163ac3754a1017b091e 382 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 121 132 - T 28-03-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 AM393_RS18830 512440aacb2de163ac3754a1017b091e 382 Pfam PF08544 GHMP kinases C terminal 279 361 1.4E-13 T 28-03-2018 IPR013750 GHMP kinase, C-terminal domain AM393_RS18830 512440aacb2de163ac3754a1017b091e 382 PRINTS PR00959 Mevalonate kinase family signature 25 49 5.8E-46 T 28-03-2018 AM393_RS18830 512440aacb2de163ac3754a1017b091e 382 PRINTS PR00959 Mevalonate kinase family signature 119 141 5.8E-46 T 28-03-2018 AM393_RS18830 512440aacb2de163ac3754a1017b091e 382 PRINTS PR00959 Mevalonate kinase family signature 328 345 5.8E-46 T 28-03-2018 AM393_RS18830 512440aacb2de163ac3754a1017b091e 382 PRINTS PR00959 Mevalonate kinase family signature 162 181 5.8E-46 T 28-03-2018 AM393_RS18830 512440aacb2de163ac3754a1017b091e 382 SUPERFAMILY SSF54211 3 202 6.83E-64 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM393_RS18830 512440aacb2de163ac3754a1017b091e 382 ProSitePatterns PS00106 Galactokinase signature. 27 38 - T 28-03-2018 IPR019741 Galactokinase, conserved site KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 AM393_RS18830 512440aacb2de163ac3754a1017b091e 382 Hamap MF_00246 Galactokinase [galK]. 25 381 45.671 T 28-03-2018 IPR022963 Galactokinase, bacterial GO:0004335|GO:0006012 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 AM393_RS18830 512440aacb2de163ac3754a1017b091e 382 SUPERFAMILY SSF55060 205 380 7.04E-53 T 28-03-2018 IPR013750 GHMP kinase, C-terminal domain AM393_RS11975 0d45466d65b4c0aeceb1499d6892b8dc 151 Gene3D G3DSA:2.160.10.10 5 39 2.1E-6 T 28-03-2018 AM393_RS11975 0d45466d65b4c0aeceb1499d6892b8dc 151 Gene3D G3DSA:2.160.10.10 40 151 8.3E-32 T 28-03-2018 AM393_RS11975 0d45466d65b4c0aeceb1499d6892b8dc 151 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 28 61 5.1E-8 T 28-03-2018 IPR001451 Hexapeptide repeat AM393_RS11975 0d45466d65b4c0aeceb1499d6892b8dc 151 SUPERFAMILY SSF51161 11 150 1.36E-35 T 28-03-2018 IPR011004 Trimeric LpxA-like AM393_RS11975 0d45466d65b4c0aeceb1499d6892b8dc 151 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 99 132 3.9E-7 T 28-03-2018 IPR001451 Hexapeptide repeat AM393_RS18855 b0779b2b8e935fc82a842cdea7767b0d 262 Gene3D G3DSA:1.10.10.10 1 107 3.2E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS18855 b0779b2b8e935fc82a842cdea7767b0d 262 SUPERFAMILY SSF50331 123 192 7.53E-18 T 28-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal AM393_RS18855 b0779b2b8e935fc82a842cdea7767b0d 262 SUPERFAMILY SSF46785 2 105 2.0E-27 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS18855 b0779b2b8e935fc82a842cdea7767b0d 262 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 20 83 1.0E-14 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS18855 b0779b2b8e935fc82a842cdea7767b0d 262 TIGRFAM TIGR00637 ModE_repress: ModE molybdate transport repressor domain 16 113 7.9E-41 T 28-03-2018 IPR003725 Molybdenum-binding protein ModE, N-terminal AM393_RS18855 b0779b2b8e935fc82a842cdea7767b0d 262 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 123 192 1.2E-25 T 28-03-2018 IPR004606 Molybdenum-pterin binding GO:0006810|GO:0030151 AM393_RS18855 b0779b2b8e935fc82a842cdea7767b0d 262 Pfam PF03459 TOBE domain 125 187 2.5E-13 T 28-03-2018 IPR005116 Transport-associated OB, type 1 AM393_RS18855 b0779b2b8e935fc82a842cdea7767b0d 262 Pfam PF03459 TOBE domain 199 257 1.7E-10 T 28-03-2018 IPR005116 Transport-associated OB, type 1 AM393_RS18855 b0779b2b8e935fc82a842cdea7767b0d 262 Gene3D G3DSA:2.40.50.100 185 252 8.2E-14 T 28-03-2018 AM393_RS18855 b0779b2b8e935fc82a842cdea7767b0d 262 PIRSF PIRSF005763 1 262 9.1E-98 T 28-03-2018 IPR016462 Molybdate-dependent transcriptional regulator ModE GO:0006355|GO:0015689|GO:0030151 AM393_RS18855 b0779b2b8e935fc82a842cdea7767b0d 262 SUPERFAMILY SSF50331 200 259 1.21E-12 T 28-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal AM393_RS18855 b0779b2b8e935fc82a842cdea7767b0d 262 Gene3D G3DSA:2.40.50.100 108 184 8.2E-18 T 28-03-2018 AM393_RS01560 ac73f4ab69a2332e57d72e72cc97eefe 129 Pfam PF14552 Tautomerase enzyme 38 118 3.5E-27 T 28-03-2018 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 AM393_RS01560 ac73f4ab69a2332e57d72e72cc97eefe 129 SUPERFAMILY SSF55331 2 128 5.04E-36 T 28-03-2018 IPR014347 Tautomerase/MIF superfamily AM393_RS01560 ac73f4ab69a2332e57d72e72cc97eefe 129 Gene3D G3DSA:3.30.429.10 1 129 1.3E-28 T 28-03-2018 AM393_RS22430 6dabf63e4cda15ed212dac8cd76be367 292 Gene3D G3DSA:1.10.10.60 241 292 1.0E-11 T 28-03-2018 AM393_RS22430 6dabf63e4cda15ed212dac8cd76be367 292 Pfam PF06719 AraC-type transcriptional regulator N-terminus 26 173 6.1E-37 T 28-03-2018 IPR009594 Transcription regulator HTH, AraC, N-terminal AM393_RS22430 6dabf63e4cda15ed212dac8cd76be367 292 SMART SM00342 202 285 3.6E-22 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM393_RS22430 6dabf63e4cda15ed212dac8cd76be367 292 Pfam PF12833 Helix-turn-helix domain 208 287 2.0E-19 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM393_RS22430 6dabf63e4cda15ed212dac8cd76be367 292 SUPERFAMILY SSF46689 185 236 2.72E-11 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS22430 6dabf63e4cda15ed212dac8cd76be367 292 Gene3D G3DSA:1.10.10.60 182 240 9.4E-15 T 28-03-2018 AM393_RS22430 6dabf63e4cda15ed212dac8cd76be367 292 SUPERFAMILY SSF46689 238 287 1.58E-8 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS24655 6e0c76e065533c05bb84c75255e89168 305 Pfam PF01062 Bestrophin, RFP-TM, chloride channel 2 283 8.3E-63 T 28-03-2018 IPR021134 Bestrophin/UPF0187 Reactome: R-HSA-2672351 AM393_RS11050 42ba6ff1a9ce0edb7f0822572a651418 367 PIRSF PIRSF000112 1 360 4.7E-97 T 28-03-2018 AM393_RS11050 42ba6ff1a9ce0edb7f0822572a651418 367 Gene3D G3DSA:3.40.50.1970 3 159 1.5E-29 T 28-03-2018 AM393_RS11050 42ba6ff1a9ce0edb7f0822572a651418 367 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 347 3.1E-66 T 28-03-2018 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 AM393_RS11050 42ba6ff1a9ce0edb7f0822572a651418 367 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 150 178 - T 28-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 AM393_RS11050 42ba6ff1a9ce0edb7f0822572a651418 367 Gene3D G3DSA:1.20.1090.10 160 363 2.0E-42 T 28-03-2018 AM393_RS11050 42ba6ff1a9ce0edb7f0822572a651418 367 SUPERFAMILY SSF56796 3 355 1.31E-88 T 28-03-2018 AM393_RS11050 42ba6ff1a9ce0edb7f0822572a651418 367 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 241 261 - T 28-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 AM393_RS18955 8f13158c88d4a6624de2412dcb13fa38 241 SUPERFAMILY SSF64288 64 239 5.18E-41 T 28-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AM393_RS18955 8f13158c88d4a6624de2412dcb13fa38 241 Pfam PF07702 UTRA domain 98 234 1.8E-34 T 28-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AM393_RS18955 8f13158c88d4a6624de2412dcb13fa38 241 SMART SM00345 17 76 1.4E-24 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM393_RS18955 8f13158c88d4a6624de2412dcb13fa38 241 Gene3D G3DSA:3.40.1410.10 77 240 6.0E-36 T 28-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AM393_RS18955 8f13158c88d4a6624de2412dcb13fa38 241 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 76 1.3E-23 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM393_RS18955 8f13158c88d4a6624de2412dcb13fa38 241 TIGRFAM TIGR02018 his_ut_repres: histidine utilization repressor 12 240 2.1E-107 T 28-03-2018 IPR010248 Histidine utilization repressor GO:0003677|GO:0006547|GO:0045892 AM393_RS18955 8f13158c88d4a6624de2412dcb13fa38 241 SUPERFAMILY SSF46785 8 80 4.15E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS18955 8f13158c88d4a6624de2412dcb13fa38 241 SMART SM00866 97 234 2.4E-31 T 28-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AM393_RS18955 8f13158c88d4a6624de2412dcb13fa38 241 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 36 50 4.0E-9 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM393_RS18955 8f13158c88d4a6624de2412dcb13fa38 241 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 50 66 4.0E-9 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM393_RS18955 8f13158c88d4a6624de2412dcb13fa38 241 Gene3D G3DSA:1.10.10.10 1 76 1.2E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS01240 1750ff9f9ea5431fd38b165408e4a857 600 Gene3D G3DSA:3.40.50.300 332 585 6.1E-73 T 28-03-2018 AM393_RS01240 1750ff9f9ea5431fd38b165408e4a857 600 Pfam PF00664 ABC transporter transmembrane region 68 277 7.2E-21 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AM393_RS01240 1750ff9f9ea5431fd38b165408e4a857 600 Gene3D G3DSA:1.20.1560.10 5 331 1.4E-36 T 28-03-2018 AM393_RS01240 1750ff9f9ea5431fd38b165408e4a857 600 Pfam PF00005 ABC transporter 360 509 3.8E-32 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS01240 1750ff9f9ea5431fd38b165408e4a857 600 SUPERFAMILY SSF90123 16 331 3.66E-44 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AM393_RS01240 1750ff9f9ea5431fd38b165408e4a857 600 ProSitePatterns PS00211 ABC transporters family signature. 481 495 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS01240 1750ff9f9ea5431fd38b165408e4a857 600 SMART SM00382 369 563 6.5E-16 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS01240 1750ff9f9ea5431fd38b165408e4a857 600 SUPERFAMILY SSF52540 337 579 3.28E-86 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS20185 a021aac8cea931a2ccc2a4e7ef7fcb42 187 Gene3D G3DSA:3.40.50.10610 12 187 6.4E-46 T 28-03-2018 IPR005586 ABC-type transport auxiliary lipoprotein component AM393_RS20185 a021aac8cea931a2ccc2a4e7ef7fcb42 187 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 26 180 4.4E-41 T 28-03-2018 IPR005586 ABC-type transport auxiliary lipoprotein component AM393_RS20185 a021aac8cea931a2ccc2a4e7ef7fcb42 187 SUPERFAMILY SSF159594 24 185 1.05E-29 T 28-03-2018 AM393_RS04795 e130406c458f3c2300e8048b957025da 330 PRINTS PR00046 Major sigma-70 factor signature 266 278 2.5E-27 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM393_RS04795 e130406c458f3c2300e8048b957025da 330 PRINTS PR00046 Major sigma-70 factor signature 287 302 2.5E-27 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM393_RS04795 e130406c458f3c2300e8048b957025da 330 PRINTS PR00046 Major sigma-70 factor signature 118 131 2.5E-27 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM393_RS04795 e130406c458f3c2300e8048b957025da 330 PRINTS PR00046 Major sigma-70 factor signature 302 313 2.5E-27 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM393_RS04795 e130406c458f3c2300e8048b957025da 330 PRINTS PR00046 Major sigma-70 factor signature 142 150 2.5E-27 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM393_RS04795 e130406c458f3c2300e8048b957025da 330 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 90 317 3.5E-35 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM393_RS04795 e130406c458f3c2300e8048b957025da 330 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 287 313 - T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM393_RS04795 e130406c458f3c2300e8048b957025da 330 Gene3D G3DSA:1.10.601.10 2 163 1.9E-59 T 28-03-2018 AM393_RS04795 e130406c458f3c2300e8048b957025da 330 Pfam PF04542 Sigma-70 region 2 94 163 3.1E-21 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM393_RS04795 e130406c458f3c2300e8048b957025da 330 TIGRFAM TIGR02394 rpoS_proteo: RNA polymerase sigma factor RpoS 48 328 8.8E-145 T 28-03-2018 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM393_RS04795 e130406c458f3c2300e8048b957025da 330 Pfam PF04545 Sigma-70, region 4 262 315 2.7E-15 T 28-03-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM393_RS04795 e130406c458f3c2300e8048b957025da 330 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 118 131 - T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM393_RS04795 e130406c458f3c2300e8048b957025da 330 SUPERFAMILY SSF88659 167 241 8.72E-15 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM393_RS04795 e130406c458f3c2300e8048b957025da 330 Pfam PF00140 Sigma-70 factor, region 1.2 56 88 2.9E-11 T 28-03-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM393_RS04795 e130406c458f3c2300e8048b957025da 330 Hamap MF_00959 RNA polymerase sigma factor RpoS [rpoS]. 3 328 39.983 T 28-03-2018 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM393_RS04795 e130406c458f3c2300e8048b957025da 330 Pfam PF04539 Sigma-70 region 3 174 248 1.2E-20 T 28-03-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM393_RS04795 e130406c458f3c2300e8048b957025da 330 SUPERFAMILY SSF88946 56 164 8.63E-46 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM393_RS04795 e130406c458f3c2300e8048b957025da 330 Gene3D G3DSA:1.10.10.10 256 324 4.2E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS04795 e130406c458f3c2300e8048b957025da 330 Gene3D G3DSA:1.10.10.10 164 214 1.6E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS04795 e130406c458f3c2300e8048b957025da 330 SUPERFAMILY SSF88659 225 323 9.16E-24 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM393_RS04140 8ea3640cf33f49407f4666adf2a1533b 253 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 32 240 2.0E-45 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM393_RS04140 8ea3640cf33f49407f4666adf2a1533b 253 Gene3D G3DSA:3.40.190.10 157 249 6.3E-7 T 28-03-2018 AM393_RS04140 8ea3640cf33f49407f4666adf2a1533b 253 SUPERFAMILY SSF53850 2 240 7.65E-45 T 28-03-2018 AM393_RS04140 8ea3640cf33f49407f4666adf2a1533b 253 SMART SM00062 31 252 7.1E-37 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM393_RS04140 8ea3640cf33f49407f4666adf2a1533b 253 Gene3D G3DSA:3.40.190.10 26 156 4.3E-27 T 28-03-2018 AM393_RS02925 e3c317f47dc016beb7c5715004c101f0 714 SUPERFAMILY SSF48179 615 707 2.47E-25 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AM393_RS02925 e3c317f47dc016beb7c5715004c101f0 714 Hamap MF_01617 Fatty acid oxidation complex subunit alpha [fadJ]. 1 707 51.942 T 28-03-2018 IPR012802 Fatty oxidation complex, alpha subunit FadJ GO:0003857|GO:0004300|GO:0006635|GO:0008692|GO:0051287|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 AM393_RS02925 e3c317f47dc016beb7c5715004c101f0 714 Gene3D G3DSA:3.40.50.720 252 490 4.7E-56 T 28-03-2018 AM393_RS02925 e3c317f47dc016beb7c5715004c101f0 714 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 489 514 - T 28-03-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 AM393_RS02925 e3c317f47dc016beb7c5715004c101f0 714 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 619 703 6.8E-6 T 28-03-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 AM393_RS02925 e3c317f47dc016beb7c5715004c101f0 714 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 492 586 2.7E-25 T 28-03-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 AM393_RS02925 e3c317f47dc016beb7c5715004c101f0 714 SUPERFAMILY SSF51735 309 489 9.47E-51 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS02925 e3c317f47dc016beb7c5715004c101f0 714 TIGRFAM TIGR02440 FadJ: fatty oxidation complex, alpha subunit FadJ 6 707 0.0 T 28-03-2018 IPR012802 Fatty oxidation complex, alpha subunit FadJ GO:0003857|GO:0004300|GO:0006635|GO:0008692|GO:0051287|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 AM393_RS02925 e3c317f47dc016beb7c5715004c101f0 714 Gene3D G3DSA:1.10.1040.10 491 591 1.2E-23 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AM393_RS02925 e3c317f47dc016beb7c5715004c101f0 714 Gene3D G3DSA:1.10.1040.10 614 707 1.6E-20 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AM393_RS02925 e3c317f47dc016beb7c5715004c101f0 714 Gene3D G3DSA:3.90.226.10 1 205 3.4E-59 T 28-03-2018 AM393_RS02925 e3c317f47dc016beb7c5715004c101f0 714 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 311 489 3.4E-57 T 28-03-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 AM393_RS02925 e3c317f47dc016beb7c5715004c101f0 714 Pfam PF00378 Enoyl-CoA hydratase/isomerase 14 203 1.6E-42 T 28-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 AM393_RS02925 e3c317f47dc016beb7c5715004c101f0 714 SUPERFAMILY SSF52096 4 300 1.96E-71 T 28-03-2018 IPR029045 ClpP/crotonase-like domain AM393_RS02925 e3c317f47dc016beb7c5715004c101f0 714 SUPERFAMILY SSF48179 492 601 1.53E-28 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AM393_RS28600 58b763a643e22699d272eecb5c9a70cb 315 Gene3D G3DSA:3.40.50.300 2 185 1.3E-16 T 28-03-2018 AM393_RS28600 58b763a643e22699d272eecb5c9a70cb 315 Pfam PF13245 AAA domain 7 163 4.5E-10 T 28-03-2018 AM393_RS28600 58b763a643e22699d272eecb5c9a70cb 315 SUPERFAMILY SSF52540 13 213 1.14E-21 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS01420 471a1b48aa07814ba72395e5554d18fa 417 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 61 147 1.2E-5 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM393_RS01420 471a1b48aa07814ba72395e5554d18fa 417 SUPERFAMILY SSF56784 5 188 2.03E-23 T 28-03-2018 IPR023214 HAD-like domain AM393_RS01420 471a1b48aa07814ba72395e5554d18fa 417 SUPERFAMILY SSF53271 335 409 1.3E-11 T 28-03-2018 IPR029057 Phosphoribosyltransferase-like AM393_RS01420 471a1b48aa07814ba72395e5554d18fa 417 Gene3D G3DSA:3.40.50.2020 238 411 4.3E-14 T 28-03-2018 AM393_RS01420 471a1b48aa07814ba72395e5554d18fa 417 Gene3D G3DSA:3.40.50.1000 1 169 7.5E-21 T 28-03-2018 IPR023214 HAD-like domain AM393_RS01420 471a1b48aa07814ba72395e5554d18fa 417 Pfam PF00156 Phosphoribosyl transferase domain 358 412 2.7E-7 T 28-03-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 AM393_RS01420 471a1b48aa07814ba72395e5554d18fa 417 Pfam PF13419 Haloacid dehalogenase-like hydrolase 33 151 1.3E-9 T 28-03-2018 IPR023214 HAD-like domain AM393_RS05380 7cef0cf9d02b77def16c2fae750277b9 1125 SUPERFAMILY SSF52540 1 347 1.27E-126 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS05380 7cef0cf9d02b77def16c2fae750277b9 1125 SUPERFAMILY SSF52980 820 1119 1.29E-97 T 28-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AM393_RS05380 7cef0cf9d02b77def16c2fae750277b9 1125 SUPERFAMILY SSF52540 362 812 1.81E-106 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS05380 7cef0cf9d02b77def16c2fae750277b9 1125 PIRSF PIRSF000980 1 1124 0.0 T 28-03-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 AM393_RS05380 7cef0cf9d02b77def16c2fae750277b9 1125 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 1 806 6.3E-300 T 28-03-2018 AM393_RS05380 7cef0cf9d02b77def16c2fae750277b9 1125 Gene3D G3DSA:1.10.486.10 442 650 1.2E-69 T 28-03-2018 AM393_RS05380 7cef0cf9d02b77def16c2fae750277b9 1125 Hamap MF_01486 RecBCD enzyme subunit RecC [recC]. 1 1123 21.18 T 28-03-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 AM393_RS05380 7cef0cf9d02b77def16c2fae750277b9 1125 Gene3D G3DSA:1.10.10.160 86 185 2.6E-31 T 28-03-2018 AM393_RS05380 7cef0cf9d02b77def16c2fae750277b9 1125 TIGRFAM TIGR01450 recC: exodeoxyribonuclease V, gamma subunit 2 1086 0.0 T 28-03-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 AM393_RS01100 f7d455b793d299c3dc373c1510c69043 303 Gene3D G3DSA:3.40.50.1980 186 301 1.8E-28 T 28-03-2018 AM393_RS01100 f7d455b793d299c3dc373c1510c69043 303 SUPERFAMILY SSF53807 26 299 5.89E-87 T 28-03-2018 AM393_RS01100 f7d455b793d299c3dc373c1510c69043 303 PRINTS PR00690 Adhesin family signature 238 256 7.3E-40 T 28-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 AM393_RS01100 f7d455b793d299c3dc373c1510c69043 303 PRINTS PR00690 Adhesin family signature 61 74 7.3E-40 T 28-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 AM393_RS01100 f7d455b793d299c3dc373c1510c69043 303 PRINTS PR00690 Adhesin family signature 264 283 7.3E-40 T 28-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 AM393_RS01100 f7d455b793d299c3dc373c1510c69043 303 PRINTS PR00690 Adhesin family signature 185 206 7.3E-40 T 28-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 AM393_RS01100 f7d455b793d299c3dc373c1510c69043 303 PRINTS PR00690 Adhesin family signature 30 48 7.3E-40 T 28-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 AM393_RS01100 f7d455b793d299c3dc373c1510c69043 303 PRINTS PR00690 Adhesin family signature 74 91 7.3E-40 T 28-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 AM393_RS01100 f7d455b793d299c3dc373c1510c69043 303 PRINTS PR00691 Adhesin B signature 234 251 2.9E-34 T 28-03-2018 IPR006129 Adhesin B GO:0007155 AM393_RS01100 f7d455b793d299c3dc373c1510c69043 303 PRINTS PR00691 Adhesin B signature 185 202 2.9E-34 T 28-03-2018 IPR006129 Adhesin B GO:0007155 AM393_RS01100 f7d455b793d299c3dc373c1510c69043 303 PRINTS PR00691 Adhesin B signature 55 73 2.9E-34 T 28-03-2018 IPR006129 Adhesin B GO:0007155 AM393_RS01100 f7d455b793d299c3dc373c1510c69043 303 PRINTS PR00691 Adhesin B signature 256 274 2.9E-34 T 28-03-2018 IPR006129 Adhesin B GO:0007155 AM393_RS01100 f7d455b793d299c3dc373c1510c69043 303 PRINTS PR00691 Adhesin B signature 211 229 2.9E-34 T 28-03-2018 IPR006129 Adhesin B GO:0007155 AM393_RS01100 f7d455b793d299c3dc373c1510c69043 303 PRINTS PR00691 Adhesin B signature 74 93 2.9E-34 T 28-03-2018 IPR006129 Adhesin B GO:0007155 AM393_RS01100 f7d455b793d299c3dc373c1510c69043 303 PRINTS PR00691 Adhesin B signature 30 51 2.9E-34 T 28-03-2018 IPR006129 Adhesin B GO:0007155 AM393_RS01100 f7d455b793d299c3dc373c1510c69043 303 Pfam PF01297 Zinc-uptake complex component A periplasmic 33 295 2.7E-70 T 28-03-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 AM393_RS01100 f7d455b793d299c3dc373c1510c69043 303 Gene3D G3DSA:3.40.50.1980 31 183 2.0E-43 T 28-03-2018 AM393_RS06915 1405f5343b88e5cea049a8134249fa8f 205 TIGRFAM TIGR00101 ureG: urease accessory protein UreG 8 200 5.2E-100 T 28-03-2018 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 AM393_RS06915 1405f5343b88e5cea049a8134249fa8f 205 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 10 178 2.9E-40 T 28-03-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain AM393_RS06915 1405f5343b88e5cea049a8134249fa8f 205 PIRSF PIRSF005624 2 203 1.5E-49 T 28-03-2018 IPR012202 [NiFe]-hydrogenase/urease maturation factor, Ni2-binding GTPase GO:0003924|GO:0016151 AM393_RS06915 1405f5343b88e5cea049a8134249fa8f 205 Gene3D G3DSA:3.40.50.300 8 183 1.6E-17 T 28-03-2018 AM393_RS06915 1405f5343b88e5cea049a8134249fa8f 205 SUPERFAMILY SSF52540 4 199 3.66E-35 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS06915 1405f5343b88e5cea049a8134249fa8f 205 Hamap MF_01389 Urease accessory protein UreG [ureG]. 6 204 46.931 T 28-03-2018 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 AM393_RS12425 f312668453ccc7eb0901e39cf70b16e5 194 SUPERFAMILY SSF159709 13 193 1.12E-58 T 28-03-2018 AM393_RS12425 f312668453ccc7eb0901e39cf70b16e5 194 TIGRFAM TIGR03292 PhnH_redo: phosphonate C-P lyase system protein PhnH 7 190 1.6E-58 T 28-03-2018 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 AM393_RS12425 f312668453ccc7eb0901e39cf70b16e5 194 Pfam PF05845 Bacterial phosphonate metabolism protein (PhnH) 6 192 1.8E-62 T 28-03-2018 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 AM393_RS12425 f312668453ccc7eb0901e39cf70b16e5 194 PIRSF PIRSF020680 1 194 1.3E-63 T 28-03-2018 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 AM393_RS05840 0fcb46a61bbbb786a0dbc0a557a13605 505 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 21 505 45.473 T 28-03-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AM393_RS05840 0fcb46a61bbbb786a0dbc0a557a13605 505 Gene3D G3DSA:3.30.930.10 156 501 3.6E-104 T 28-03-2018 AM393_RS05840 0fcb46a61bbbb786a0dbc0a557a13605 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 262 279 1.9E-39 T 28-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AM393_RS05840 0fcb46a61bbbb786a0dbc0a557a13605 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 215 231 1.9E-39 T 28-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AM393_RS05840 0fcb46a61bbbb786a0dbc0a557a13605 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 199 209 1.9E-39 T 28-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AM393_RS05840 0fcb46a61bbbb786a0dbc0a557a13605 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 244 257 1.9E-39 T 28-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AM393_RS05840 0fcb46a61bbbb786a0dbc0a557a13605 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 386 402 1.9E-39 T 28-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AM393_RS05840 0fcb46a61bbbb786a0dbc0a557a13605 505 Gene3D G3DSA:2.40.50.140 15 154 1.0E-40 T 28-03-2018 AM393_RS05840 0fcb46a61bbbb786a0dbc0a557a13605 505 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 14 505 8.0E-238 T 28-03-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AM393_RS05840 0fcb46a61bbbb786a0dbc0a557a13605 505 SUPERFAMILY SSF55681 162 502 2.31E-122 T 28-03-2018 AM393_RS05840 0fcb46a61bbbb786a0dbc0a557a13605 505 SUPERFAMILY SSF50249 13 155 9.79E-48 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM393_RS05840 0fcb46a61bbbb786a0dbc0a557a13605 505 Pfam PF00152 tRNA synthetases class II (D, K and N) 162 501 1.3E-81 T 28-03-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM393_RS05840 0fcb46a61bbbb786a0dbc0a557a13605 505 PIRSF PIRSF039101 1 505 5.8E-205 T 28-03-2018 IPR034762 Bacterial/eukaryotic lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AM393_RS05840 0fcb46a61bbbb786a0dbc0a557a13605 505 Pfam PF01336 OB-fold nucleic acid binding domain 68 146 9.9E-15 T 28-03-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 AM393_RS07550 f80b7ba560d2e69c79973b855f9a892c 644 SUPERFAMILY SSF140990 402 602 1.44E-72 T 28-03-2018 AM393_RS07550 f80b7ba560d2e69c79973b855f9a892c 644 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 3 616 37.419 T 28-03-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 AM393_RS07550 f80b7ba560d2e69c79973b855f9a892c 644 Gene3D G3DSA:3.40.50.300 128 331 5.2E-63 T 28-03-2018 AM393_RS07550 f80b7ba560d2e69c79973b855f9a892c 644 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 188 320 6.4E-46 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AM393_RS07550 f80b7ba560d2e69c79973b855f9a892c 644 ProSitePatterns PS00674 AAA-protein family signature. 291 309 - T 28-03-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 AM393_RS07550 f80b7ba560d2e69c79973b855f9a892c 644 Pfam PF06480 FtsH Extracellular 5 93 3.6E-17 T 28-03-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 AM393_RS07550 f80b7ba560d2e69c79973b855f9a892c 644 SUPERFAMILY SSF52540 141 391 1.71E-72 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS07550 f80b7ba560d2e69c79973b855f9a892c 644 Pfam PF01434 Peptidase family M41 382 591 2.8E-82 T 28-03-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 AM393_RS07550 f80b7ba560d2e69c79973b855f9a892c 644 Gene3D G3DSA:1.10.8.60 332 411 3.2E-25 T 28-03-2018 AM393_RS07550 f80b7ba560d2e69c79973b855f9a892c 644 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 100 593 2.4E-247 T 28-03-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 AM393_RS07550 f80b7ba560d2e69c79973b855f9a892c 644 SMART SM00382 184 323 1.9E-26 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS27190 3a09eda29641ef2a878a4baf62df0454 82 Gene3D G3DSA:3.30.160.130 10 80 7.1E-39 T 28-03-2018 AM393_RS27190 3a09eda29641ef2a878a4baf62df0454 82 ProDom PD028015 PLASMID YKFF YDEA R0111 YPJI YPMT1.60C C4569 AEC70 PSLT067 YFJA 6 82 2.0E-19 T 28-03-2018 IPR009253 Protein of unknown function DUF905 AM393_RS27190 3a09eda29641ef2a878a4baf62df0454 82 SUPERFAMILY SSF54786 15 80 1.57E-28 T 28-03-2018 AM393_RS27190 3a09eda29641ef2a878a4baf62df0454 82 Pfam PF06006 Bacterial protein of unknown function (DUF905) 10 80 7.5E-43 T 28-03-2018 IPR009253 Protein of unknown function DUF905 AM393_RS09555 3b1ec0da5e96e6d671bf3cf4b64b18ee 394 PIRSF PIRSF000138 2 380 1.3E-119 T 28-03-2018 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 AM393_RS09555 3b1ec0da5e96e6d671bf3cf4b64b18ee 394 SUPERFAMILY SSF51395 223 375 9.77E-98 T 28-03-2018 AM393_RS09555 3b1ec0da5e96e6d671bf3cf4b64b18ee 394 SUPERFAMILY SSF51395 6 193 9.77E-98 T 28-03-2018 AM393_RS09555 3b1ec0da5e96e6d671bf3cf4b64b18ee 394 Hamap MF_01559 L-lactate dehydrogenase [lldD]. 1 380 73.936 T 28-03-2018 IPR020920 L-lactate dehydrogenase, bacterial GO:0004457|GO:0006089|GO:0010181|GO:0055114 AM393_RS09555 3b1ec0da5e96e6d671bf3cf4b64b18ee 394 ProSitePatterns PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site. 273 279 - T 28-03-2018 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site GO:0016491|GO:0055114 AM393_RS09555 3b1ec0da5e96e6d671bf3cf4b64b18ee 394 Pfam PF01070 FMN-dependent dehydrogenase 13 375 3.8E-123 T 28-03-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 AM393_RS09555 3b1ec0da5e96e6d671bf3cf4b64b18ee 394 Gene3D G3DSA:3.20.20.70 2 380 3.6E-95 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM393_RS23090 972dc8f3465f0c3e5296dc5d7e46ac6b 538 Gene3D G3DSA:1.10.287.130 326 379 9.5E-14 T 28-03-2018 AM393_RS23090 972dc8f3465f0c3e5296dc5d7e46ac6b 538 SUPERFAMILY SSF103190 49 180 3.14E-39 T 28-03-2018 IPR029151 Periplasmic sensor domain-like AM393_RS23090 972dc8f3465f0c3e5296dc5d7e46ac6b 538 Pfam PF17203 Single cache domain 3 51 180 3.6E-20 T 28-03-2018 IPR033463 Single cache domain 3 AM393_RS23090 972dc8f3465f0c3e5296dc5d7e46ac6b 538 Gene3D G3DSA:3.30.565.10 389 538 3.1E-25 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS23090 972dc8f3465f0c3e5296dc5d7e46ac6b 538 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 430 530 1.7E-15 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS23090 972dc8f3465f0c3e5296dc5d7e46ac6b 538 Gene3D G3DSA:3.30.450.20 42 183 3.4E-29 T 28-03-2018 AM393_RS23090 972dc8f3465f0c3e5296dc5d7e46ac6b 538 Pfam PF00989 PAS fold 225 275 2.5E-6 T 28-03-2018 IPR013767 PAS fold GO:0006355 AM393_RS23090 972dc8f3465f0c3e5296dc5d7e46ac6b 538 SMART SM00387 425 533 4.3E-17 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS23090 972dc8f3465f0c3e5296dc5d7e46ac6b 538 SUPERFAMILY SSF55874 423 530 1.7E-26 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS23090 972dc8f3465f0c3e5296dc5d7e46ac6b 538 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 332 373 5.9E-9 T 28-03-2018 AM393_RS23090 972dc8f3465f0c3e5296dc5d7e46ac6b 538 SUPERFAMILY SSF55890 334 397 4.45E-12 T 28-03-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 AM393_RS23090 972dc8f3465f0c3e5296dc5d7e46ac6b 538 PRINTS PR00344 Bacterial sensor protein C-terminal signature 493 511 1.4E-8 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM393_RS23090 972dc8f3465f0c3e5296dc5d7e46ac6b 538 PRINTS PR00344 Bacterial sensor protein C-terminal signature 517 530 1.4E-8 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM393_RS23090 972dc8f3465f0c3e5296dc5d7e46ac6b 538 PRINTS PR00344 Bacterial sensor protein C-terminal signature 464 478 1.4E-8 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM393_RS23090 972dc8f3465f0c3e5296dc5d7e46ac6b 538 PRINTS PR00344 Bacterial sensor protein C-terminal signature 482 492 1.4E-8 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM393_RS23090 972dc8f3465f0c3e5296dc5d7e46ac6b 538 Gene3D G3DSA:3.30.450.20 215 325 6.3E-10 T 28-03-2018 AM393_RS25045 80595683cd478488881763930900f947 437 Gene3D G3DSA:3.20.20.30 1 437 2.4E-101 T 28-03-2018 AM393_RS25045 80595683cd478488881763930900f947 437 PIRSF PIRSF000337 2 437 1.2E-141 T 28-03-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 AM393_RS25045 80595683cd478488881763930900f947 437 SUPERFAMILY SSF51679 4 431 5.76E-130 T 28-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AM393_RS25045 80595683cd478488881763930900f947 437 Pfam PF00296 Luciferase-like monooxygenase 20 376 1.9E-63 T 28-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AM393_RS25045 80595683cd478488881763930900f947 437 TIGRFAM TIGR03860 FMN_nitrolo: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family 9 424 3.2E-165 T 28-03-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 AM393_RS03675 b89010f05fd8b3f3777b5b06812cbbe4 1091 Pfam PF17128 Domain of unknown function (DUF5107) 40 344 4.0E-65 T 28-03-2018 IPR033396 Domain of unknown function DUF5107 AM393_RS03675 b89010f05fd8b3f3777b5b06812cbbe4 1091 Gene3D G3DSA:1.25.40.10 513 561 5.3E-4 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM393_RS03675 b89010f05fd8b3f3777b5b06812cbbe4 1091 Gene3D G3DSA:1.25.40.10 458 512 3.8E-4 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM393_RS03675 b89010f05fd8b3f3777b5b06812cbbe4 1091 Gene3D G3DSA:1.25.40.10 760 835 1.1E-12 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM393_RS03675 b89010f05fd8b3f3777b5b06812cbbe4 1091 Gene3D G3DSA:1.20.1250.10 702 759 0.16 T 28-03-2018 AM393_RS03675 b89010f05fd8b3f3777b5b06812cbbe4 1091 Gene3D G3DSA:1.25.40.10 992 1086 3.8E-4 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM393_RS03675 b89010f05fd8b3f3777b5b06812cbbe4 1091 SUPERFAMILY SSF48452 482 627 3.5E-15 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM393_RS03675 b89010f05fd8b3f3777b5b06812cbbe4 1091 SUPERFAMILY SSF48452 742 818 7.27E-18 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM393_RS03675 b89010f05fd8b3f3777b5b06812cbbe4 1091 SUPERFAMILY SSF48452 897 1009 7.27E-18 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM393_RS03675 b89010f05fd8b3f3777b5b06812cbbe4 1091 Gene3D G3DSA:1.25.40.10 885 991 1.6E-10 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM393_RS03675 b89010f05fd8b3f3777b5b06812cbbe4 1091 SMART SM00028 568 601 30.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AM393_RS03675 b89010f05fd8b3f3777b5b06812cbbe4 1091 SMART SM00028 979 1012 290.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AM393_RS03675 b89010f05fd8b3f3777b5b06812cbbe4 1091 SMART SM00028 935 968 57.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AM393_RS03675 b89010f05fd8b3f3777b5b06812cbbe4 1091 SMART SM00028 778 812 61.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AM393_RS03675 b89010f05fd8b3f3777b5b06812cbbe4 1091 SMART SM00028 744 777 0.0053 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AM393_RS03675 b89010f05fd8b3f3777b5b06812cbbe4 1091 SMART SM00028 602 635 71.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AM393_RS03675 b89010f05fd8b3f3777b5b06812cbbe4 1091 Pfam PF13432 Tetratricopeptide repeat 901 962 0.0018 T 28-03-2018 AM393_RS03675 b89010f05fd8b3f3777b5b06812cbbe4 1091 Pfam PF13432 Tetratricopeptide repeat 574 633 0.0094 T 28-03-2018 AM393_RS03675 b89010f05fd8b3f3777b5b06812cbbe4 1091 Pfam PF13432 Tetratricopeptide repeat 757 812 3.3E-4 T 28-03-2018 AM393_RS03675 b89010f05fd8b3f3777b5b06812cbbe4 1091 Gene3D G3DSA:1.25.40.10 563 701 5.1E-7 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM393_RS03095 cf683e78bcddab231c14ef5d9b73166a 332 PIRSF PIRSF026166 1 332 2.7E-132 T 28-03-2018 IPR016833 Putative sodium bile acid cotransporter AM393_RS03095 cf683e78bcddab231c14ef5d9b73166a 332 Pfam PF13593 SBF-like CPA transporter family (DUF4137) 8 315 1.6E-100 T 28-03-2018 IPR016833 Putative sodium bile acid cotransporter AM393_RS25910 d03e4b03e14bdb449847f7c204c671d0 234 SUPERFAMILY SSF46894 159 230 1.76E-18 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM393_RS25910 d03e4b03e14bdb449847f7c204c671d0 234 SMART SM00448 5 115 6.0E-33 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM393_RS25910 d03e4b03e14bdb449847f7c204c671d0 234 Pfam PF00072 Response regulator receiver domain 7 115 1.7E-25 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM393_RS25910 d03e4b03e14bdb449847f7c204c671d0 234 Gene3D G3DSA:3.40.50.2300 1 121 2.0E-32 T 28-03-2018 AM393_RS25910 d03e4b03e14bdb449847f7c204c671d0 234 Gene3D G3DSA:1.10.10.10 122 234 3.0E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS25910 d03e4b03e14bdb449847f7c204c671d0 234 SUPERFAMILY SSF52172 3 130 1.14E-37 T 28-03-2018 IPR011006 CheY-like superfamily AM393_RS25910 d03e4b03e14bdb449847f7c204c671d0 234 Pfam PF00486 Transcriptional regulatory protein, C terminal 161 230 3.1E-19 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM393_RS25910 d03e4b03e14bdb449847f7c204c671d0 234 SMART SM00862 157 230 5.8E-22 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM393_RS18995 d99f25edb38856b2940ec98e4066c56d 385 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 20 381 6.3E-136 T 28-03-2018 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 AM393_RS18995 d99f25edb38856b2940ec98e4066c56d 385 Hamap MF_01693 8-amino-7-oxononanoate synthase [bioF]. 3 384 47.284 T 28-03-2018 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 AM393_RS18995 d99f25edb38856b2940ec98e4066c56d 385 Gene3D G3DSA:3.90.1150.10 271 383 3.4E-31 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM393_RS18995 d99f25edb38856b2940ec98e4066c56d 385 Gene3D G3DSA:3.40.640.10 57 270 4.1E-40 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM393_RS18995 d99f25edb38856b2940ec98e4066c56d 385 Pfam PF00155 Aminotransferase class I and II 40 380 3.1E-60 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AM393_RS18995 d99f25edb38856b2940ec98e4066c56d 385 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 233 242 - T 28-03-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 AM393_RS18995 d99f25edb38856b2940ec98e4066c56d 385 SUPERFAMILY SSF53383 3 380 1.53E-102 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM393_RS16530 8f8184b63ebcfa815a1fa4d1f1808a4d 152 SMART SM00344 2 111 1.8E-37 T 28-03-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AM393_RS16530 8f8184b63ebcfa815a1fa4d1f1808a4d 152 Pfam PF01037 Lrp/AsnC ligand binding domain 68 142 9.4E-21 T 28-03-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AM393_RS16530 8f8184b63ebcfa815a1fa4d1f1808a4d 152 ProSitePatterns PS00519 AsnC-type HTH domain signature. 20 46 - T 28-03-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AM393_RS16530 8f8184b63ebcfa815a1fa4d1f1808a4d 152 Gene3D G3DSA:3.30.70.920 55 148 2.3E-26 T 28-03-2018 AM393_RS16530 8f8184b63ebcfa815a1fa4d1f1808a4d 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 2 18 7.6E-11 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AM393_RS16530 8f8184b63ebcfa815a1fa4d1f1808a4d 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 29 48 7.6E-11 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AM393_RS16530 8f8184b63ebcfa815a1fa4d1f1808a4d 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 18 29 7.6E-11 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AM393_RS16530 8f8184b63ebcfa815a1fa4d1f1808a4d 152 Pfam PF13412 Winged helix-turn-helix DNA-binding 2 49 1.3E-16 T 28-03-2018 AM393_RS16530 8f8184b63ebcfa815a1fa4d1f1808a4d 152 Gene3D G3DSA:1.10.10.10 3 54 7.4E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS16530 8f8184b63ebcfa815a1fa4d1f1808a4d 152 SUPERFAMILY SSF54909 62 151 5.09E-20 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel AM393_RS16530 8f8184b63ebcfa815a1fa4d1f1808a4d 152 SUPERFAMILY SSF46785 1 61 1.42E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS02450 f99bf52f38d642c20bf9494339c29766 478 SUPERFAMILY SSF54631 164 304 1.1E-25 T 28-03-2018 AM393_RS02450 f99bf52f38d642c20bf9494339c29766 478 Gene3D G3DSA:3.10.580.10 161 288 2.1E-16 T 28-03-2018 AM393_RS02450 f99bf52f38d642c20bf9494339c29766 478 SUPERFAMILY SSF161093 306 477 2.22E-48 T 28-03-2018 AM393_RS02450 f99bf52f38d642c20bf9494339c29766 478 SUPERFAMILY SSF158791 51 162 3.79E-23 T 28-03-2018 AM393_RS02450 f99bf52f38d642c20bf9494339c29766 478 Pfam PF00571 CBS domain 229 283 1.9E-5 T 28-03-2018 IPR000644 CBS domain AM393_RS02450 f99bf52f38d642c20bf9494339c29766 478 SMART SM00924 62 165 7.4E-33 T 28-03-2018 IPR006668 Magnesium transporter, MgtE intracellular domain AM393_RS02450 f99bf52f38d642c20bf9494339c29766 478 Pfam PF03448 MgtE intracellular N domain 63 163 1.8E-23 T 28-03-2018 IPR006668 Magnesium transporter, MgtE intracellular domain AM393_RS02450 f99bf52f38d642c20bf9494339c29766 478 TIGRFAM TIGR00400 mgtE: magnesium transporter 54 477 2.6E-80 T 28-03-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 AM393_RS02450 f99bf52f38d642c20bf9494339c29766 478 Gene3D G3DSA:1.25.60.10 36 160 1.4E-16 T 28-03-2018 AM393_RS02450 f99bf52f38d642c20bf9494339c29766 478 Gene3D G3DSA:1.10.357.20 305 478 7.2E-34 T 28-03-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 AM393_RS02450 f99bf52f38d642c20bf9494339c29766 478 SMART SM00116 236 284 0.0056 T 28-03-2018 IPR000644 CBS domain AM393_RS02450 f99bf52f38d642c20bf9494339c29766 478 Pfam PF01769 Divalent cation transporter 349 470 3.2E-24 T 28-03-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 AM393_RS23165 e83dc06cf7fe35bab737fe09d2dfe8d8 120 SUPERFAMILY SSF103481 6 105 1.44E-15 T 28-03-2018 AM393_RS23165 e83dc06cf7fe35bab737fe09d2dfe8d8 120 Pfam PF00893 Small Multidrug Resistance protein 3 93 8.6E-25 T 28-03-2018 IPR000390 Small multidrug resistance protein family GO:0016021 AM393_RS23165 e83dc06cf7fe35bab737fe09d2dfe8d8 120 Hamap MF_01598 Spermidine export protein MdtJ [mdtJ]. 1 120 29.511 T 28-03-2018 IPR023740 Spermidine export protein MdtJ GO:0005886|GO:0015606|GO:0015848 AM393_RS26270 4bf12a47b4c5a654192be8f7f47014c1 470 Gene3D G3DSA:3.20.20.60 162 321 1.1E-63 T 28-03-2018 AM393_RS26270 4bf12a47b4c5a654192be8f7f47014c1 470 Gene3D G3DSA:2.40.33.10 80 161 8.4E-31 T 28-03-2018 AM393_RS26270 4bf12a47b4c5a654192be8f7f47014c1 470 Gene3D G3DSA:3.40.1380.20 322 470 6.4E-46 T 28-03-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM393_RS26270 4bf12a47b4c5a654192be8f7f47014c1 470 PRINTS PR01050 Pyruvate kinase family signature 59 75 3.3E-76 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM393_RS26270 4bf12a47b4c5a654192be8f7f47014c1 470 PRINTS PR01050 Pyruvate kinase family signature 186 200 3.3E-76 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM393_RS26270 4bf12a47b4c5a654192be8f7f47014c1 470 PRINTS PR01050 Pyruvate kinase family signature 244 268 3.3E-76 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM393_RS26270 4bf12a47b4c5a654192be8f7f47014c1 470 PRINTS PR01050 Pyruvate kinase family signature 294 312 3.3E-76 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM393_RS26270 4bf12a47b4c5a654192be8f7f47014c1 470 PRINTS PR01050 Pyruvate kinase family signature 313 329 3.3E-76 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM393_RS26270 4bf12a47b4c5a654192be8f7f47014c1 470 PRINTS PR01050 Pyruvate kinase family signature 217 243 3.3E-76 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM393_RS26270 4bf12a47b4c5a654192be8f7f47014c1 470 PRINTS PR01050 Pyruvate kinase family signature 269 293 3.3E-76 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM393_RS26270 4bf12a47b4c5a654192be8f7f47014c1 470 Pfam PF02887 Pyruvate kinase, alpha/beta domain 356 468 1.8E-29 T 28-03-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM393_RS26270 4bf12a47b4c5a654192be8f7f47014c1 470 SUPERFAMILY SSF51621 1 74 5.58E-100 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AM393_RS26270 4bf12a47b4c5a654192be8f7f47014c1 470 SUPERFAMILY SSF51621 156 339 5.58E-100 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AM393_RS26270 4bf12a47b4c5a654192be8f7f47014c1 470 SUPERFAMILY SSF50800 70 166 2.79E-29 T 28-03-2018 IPR011037 Pyruvate kinase-like, insert domain AM393_RS26270 4bf12a47b4c5a654192be8f7f47014c1 470 Gene3D G3DSA:3.20.20.60 1 79 2.2E-18 T 28-03-2018 AM393_RS26270 4bf12a47b4c5a654192be8f7f47014c1 470 SUPERFAMILY SSF52935 323 469 1.27E-36 T 28-03-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM393_RS26270 4bf12a47b4c5a654192be8f7f47014c1 470 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 2 469 1.1E-190 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM393_RS26270 4bf12a47b4c5a654192be8f7f47014c1 470 ProSitePatterns PS00110 Pyruvate kinase active site signature. 215 227 - T 28-03-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM393_RS26270 4bf12a47b4c5a654192be8f7f47014c1 470 Pfam PF00224 Pyruvate kinase, barrel domain 1 341 3.2E-151 T 28-03-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM393_RS14680 118016ffb7cafc5e089052d5a219a0e4 281 Pfam PF02311 AraC-like ligand binding domain 28 160 5.5E-24 T 28-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AM393_RS14680 118016ffb7cafc5e089052d5a219a0e4 281 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 231 273 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM393_RS14680 118016ffb7cafc5e089052d5a219a0e4 281 Gene3D G3DSA:1.10.10.60 230 280 3.0E-12 T 28-03-2018 AM393_RS14680 118016ffb7cafc5e089052d5a219a0e4 281 Gene3D G3DSA:1.10.10.60 176 229 2.4E-11 T 28-03-2018 AM393_RS14680 118016ffb7cafc5e089052d5a219a0e4 281 Gene3D G3DSA:2.60.120.280 7 170 2.4E-26 T 28-03-2018 AM393_RS14680 118016ffb7cafc5e089052d5a219a0e4 281 SUPERFAMILY SSF46689 176 227 7.08E-7 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS14680 118016ffb7cafc5e089052d5a219a0e4 281 SMART SM00342 194 277 7.5E-31 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM393_RS14680 118016ffb7cafc5e089052d5a219a0e4 281 SUPERFAMILY SSF51215 8 163 1.12E-36 T 28-03-2018 AM393_RS14680 118016ffb7cafc5e089052d5a219a0e4 281 SUPERFAMILY SSF46689 231 279 3.27E-12 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS14680 118016ffb7cafc5e089052d5a219a0e4 281 Pfam PF12833 Helix-turn-helix domain 200 278 3.8E-20 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM393_RS14680 118016ffb7cafc5e089052d5a219a0e4 281 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 246 261 4.0E-6 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM393_RS14680 118016ffb7cafc5e089052d5a219a0e4 281 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 261 277 4.0E-6 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM393_RS17800 7ed2bbd21488bcb1e58d161978bf4e55 487 Pfam PF00155 Aminotransferase class I and II 191 402 2.2E-9 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AM393_RS17800 7ed2bbd21488bcb1e58d161978bf4e55 487 Gene3D G3DSA:3.90.1150.10 381 487 9.8E-16 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM393_RS17800 7ed2bbd21488bcb1e58d161978bf4e55 487 SUPERFAMILY SSF53383 110 485 3.48E-74 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM393_RS17800 7ed2bbd21488bcb1e58d161978bf4e55 487 SMART SM00345 20 79 2.8E-9 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM393_RS17800 7ed2bbd21488bcb1e58d161978bf4e55 487 Gene3D G3DSA:1.10.10.10 2 81 5.9E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS17800 7ed2bbd21488bcb1e58d161978bf4e55 487 SUPERFAMILY SSF46785 9 83 1.68E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS17800 7ed2bbd21488bcb1e58d161978bf4e55 487 Gene3D G3DSA:3.40.640.10 171 380 1.9E-34 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM393_RS17800 7ed2bbd21488bcb1e58d161978bf4e55 487 Pfam PF00392 Bacterial regulatory proteins, gntR family 16 78 8.0E-11 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM393_RS03915 12e24c83cf8652e9f6a43069cfc2bacc 245 Gene3D G3DSA:1.25.20.10 30 244 1.1E-14 T 28-03-2018 AM393_RS03915 12e24c83cf8652e9f6a43069cfc2bacc 245 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 4 242 39.295 T 28-03-2018 IPR017689 Outer membrane protein assembly factor BamD AM393_RS03915 12e24c83cf8652e9f6a43069cfc2bacc 245 SUPERFAMILY SSF48452 27 121 7.83E-9 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM393_RS03915 12e24c83cf8652e9f6a43069cfc2bacc 245 Pfam PF13525 Outer membrane lipoprotein 28 236 4.0E-84 T 28-03-2018 AM393_RS03915 12e24c83cf8652e9f6a43069cfc2bacc 245 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 5 244 2.5E-88 T 28-03-2018 IPR017689 Outer membrane protein assembly factor BamD AM393_RS00980 741b4d3f9cc230801cef0f7c1d185ecb 381 SUPERFAMILY SSF56935 22 381 2.06E-78 T 28-03-2018 AM393_RS00980 741b4d3f9cc230801cef0f7c1d185ecb 381 PRINTS PR00183 E.coli/Salmonella-type porin signature 22 38 3.9E-66 T 28-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 AM393_RS00980 741b4d3f9cc230801cef0f7c1d185ecb 381 PRINTS PR00183 E.coli/Salmonella-type porin signature 51 69 3.9E-66 T 28-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 AM393_RS00980 741b4d3f9cc230801cef0f7c1d185ecb 381 PRINTS PR00183 E.coli/Salmonella-type porin signature 282 301 3.9E-66 T 28-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 AM393_RS00980 741b4d3f9cc230801cef0f7c1d185ecb 381 PRINTS PR00183 E.coli/Salmonella-type porin signature 250 267 3.9E-66 T 28-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 AM393_RS00980 741b4d3f9cc230801cef0f7c1d185ecb 381 PRINTS PR00183 E.coli/Salmonella-type porin signature 95 117 3.9E-66 T 28-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 AM393_RS00980 741b4d3f9cc230801cef0f7c1d185ecb 381 PRINTS PR00183 E.coli/Salmonella-type porin signature 150 172 3.9E-66 T 28-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 AM393_RS00980 741b4d3f9cc230801cef0f7c1d185ecb 381 ProSitePatterns PS00576 General diffusion Gram-negative porins signature. 332 348 - T 28-03-2018 IPR013793 Porin, Gram-negative type, conserved site AM393_RS00980 741b4d3f9cc230801cef0f7c1d185ecb 381 Pfam PF00267 Gram-negative porin 27 381 1.9E-151 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 AM393_RS00980 741b4d3f9cc230801cef0f7c1d185ecb 381 Gene3D G3DSA:2.40.160.10 32 381 1.2E-52 T 28-03-2018 AM393_RS00980 741b4d3f9cc230801cef0f7c1d185ecb 381 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 332 349 1.2E-15 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 AM393_RS00980 741b4d3f9cc230801cef0f7c1d185ecb 381 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 244 256 1.2E-15 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 AM393_RS00980 741b4d3f9cc230801cef0f7c1d185ecb 381 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 52 63 1.2E-15 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 AM393_RS00980 741b4d3f9cc230801cef0f7c1d185ecb 381 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 152 163 1.2E-15 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 AM393_RS00980 741b4d3f9cc230801cef0f7c1d185ecb 381 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 95 105 1.2E-15 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 AM393_RS22345 9fb5349136d10cc22e2ba633489b9262 176 Pfam PF11745 Protein of unknown function (DUF3304) 30 148 8.9E-34 T 28-03-2018 IPR021733 Protein of unknown function DUF3304 AM393_RS11865 64f98c430584e3009faadc173c671b73 153 Gene3D G3DSA:3.40.630.30 1 147 9.9E-28 T 28-03-2018 AM393_RS11865 64f98c430584e3009faadc173c671b73 153 Pfam PF13673 Acetyltransferase (GNAT) domain 28 131 2.0E-15 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AM393_RS11865 64f98c430584e3009faadc173c671b73 153 SUPERFAMILY SSF55729 3 138 8.61E-27 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM393_RS15155 698a49ad8d2b3db998202b3770659f6a 397 Pfam PF05134 Type II secretion system (T2SS), protein L 12 236 3.0E-46 T 28-03-2018 IPR024230 GspL, cytoplasmic actin-ATPase-like domain AM393_RS15155 698a49ad8d2b3db998202b3770659f6a 397 SUPERFAMILY SSF53067 11 149 2.46E-28 T 28-03-2018 AM393_RS15155 698a49ad8d2b3db998202b3770659f6a 397 SUPERFAMILY SSF53067 153 234 1.17E-19 T 28-03-2018 AM393_RS15155 698a49ad8d2b3db998202b3770659f6a 397 TIGRFAM TIGR01709 typeII_sec_gspL: type II secretion system protein L 13 393 2.9E-66 T 28-03-2018 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 AM393_RS15155 698a49ad8d2b3db998202b3770659f6a 397 Pfam PF12693 GspL periplasmic domain 242 394 2.9E-27 T 28-03-2018 IPR025691 GspL periplasmic domain AM393_RS15155 698a49ad8d2b3db998202b3770659f6a 397 PIRSF PIRSF015761 6 396 1.8E-31 T 28-03-2018 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 AM393_RS16955 0515f183791c1649d971e506c3d37a7b 218 Pfam PF05063 MT-A70 4 91 2.8E-11 T 28-03-2018 IPR007757 MT-A70-like GO:0006139|GO:0008168 AM393_RS16955 0515f183791c1649d971e506c3d37a7b 218 Pfam PF05063 MT-A70 120 196 4.4E-8 T 28-03-2018 IPR007757 MT-A70-like GO:0006139|GO:0008168 AM393_RS23890 3f72f2fa56121511922c38ff9af92769 391 PIRSF PIRSF006078 1 381 5.5E-121 T 28-03-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 AM393_RS23890 3f72f2fa56121511922c38ff9af92769 391 Pfam PF02595 Glycerate kinase family 3 377 8.2E-127 T 28-03-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 AM393_RS23890 3f72f2fa56121511922c38ff9af92769 391 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 2 377 3.6E-128 T 28-03-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 AM393_RS23890 3f72f2fa56121511922c38ff9af92769 391 Gene3D G3DSA:3.90.1510.10 42 280 5.8E-80 T 28-03-2018 IPR018193 Glycerate kinase, flavodoxin-like domain GO:0008887|GO:0031388 AM393_RS23890 3f72f2fa56121511922c38ff9af92769 391 SUPERFAMILY SSF110738 1 377 2.62E-112 T 28-03-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 AM393_RS28960 1fcdd94216f3b9f98502662490783c76 325 Pfam PF02195 ParB-like nuclease domain 63 138 1.4E-5 T 28-03-2018 IPR003115 ParB/Sulfiredoxin AM393_RS28960 1fcdd94216f3b9f98502662490783c76 325 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 51 215 2.9E-28 T 28-03-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 AM393_RS28960 1fcdd94216f3b9f98502662490783c76 325 SMART SM00470 52 139 9.0E-7 T 28-03-2018 IPR003115 ParB/Sulfiredoxin AM393_RS28960 1fcdd94216f3b9f98502662490783c76 325 Gene3D G3DSA:1.10.1270.10 70 186 2.7E-4 T 28-03-2018 AM393_RS28960 1fcdd94216f3b9f98502662490783c76 325 Pfam PF08775 ParB family 195 320 6.0E-46 T 28-03-2018 IPR014884 ParB protein family, C-terminal AM393_RS28960 1fcdd94216f3b9f98502662490783c76 325 SUPERFAMILY SSF109709 144 226 1.44E-5 T 28-03-2018 AM393_RS13895 bb90139cdc4d33e5e55f4e299b512fd6 452 Pfam PF07690 Major Facilitator Superfamily 32 373 4.9E-46 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS13895 bb90139cdc4d33e5e55f4e299b512fd6 452 SUPERFAMILY SSF103473 14 433 5.1E-84 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS13895 bb90139cdc4d33e5e55f4e299b512fd6 452 TIGRFAM TIGR02332 HpaX: 4-hydroxyphenylacetate permease 20 424 1.8E-249 T 28-03-2018 IPR012707 4-hydroxyphenylacetate permease GO:1900754|GO:1901241 AM393_RS13895 bb90139cdc4d33e5e55f4e299b512fd6 452 Gene3D G3DSA:1.20.1250.20 16 226 1.2E-37 T 28-03-2018 AM393_RS13895 bb90139cdc4d33e5e55f4e299b512fd6 452 Gene3D G3DSA:1.20.1250.20 245 445 2.1E-23 T 28-03-2018 AM393_RS26840 2f5c3c20977d575f0396e1b3b8cb0c8f 203 Pfam PF03550 Outer membrane lipoprotein LolB 46 200 7.3E-48 T 28-03-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 AM393_RS26840 2f5c3c20977d575f0396e1b3b8cb0c8f 203 Gene3D G3DSA:2.50.20.10 26 203 2.7E-55 T 28-03-2018 AM393_RS26840 2f5c3c20977d575f0396e1b3b8cb0c8f 203 TIGRFAM TIGR00548 lolB: outer membrane lipoprotein LolB 3 202 3.3E-86 T 28-03-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 AM393_RS26840 2f5c3c20977d575f0396e1b3b8cb0c8f 203 SUPERFAMILY SSF89392 30 202 1.26E-53 T 28-03-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX AM393_RS26840 2f5c3c20977d575f0396e1b3b8cb0c8f 203 Hamap MF_00233 Outer-membrane lipoprotein LolB [lolB]. 2 202 29.169 T 28-03-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 AM393_RS16845 6c22922d062f209ca89b16d275033314 256 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 182 3.7E-4 T 28-03-2018 AM393_RS16845 6c22922d062f209ca89b16d275033314 256 SUPERFAMILY SSF51735 3 253 9.01E-60 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS16845 6c22922d062f209ca89b16d275033314 256 Pfam PF00106 short chain dehydrogenase 3 191 4.4E-43 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS16845 6c22922d062f209ca89b16d275033314 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 1.4E-18 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS16845 6c22922d062f209ca89b16d275033314 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 1.4E-18 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS16845 6c22922d062f209ca89b16d275033314 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.4E-18 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS16845 6c22922d062f209ca89b16d275033314 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 1.4E-18 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS16845 6c22922d062f209ca89b16d275033314 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 120 136 1.4E-18 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS16845 6c22922d062f209ca89b16d275033314 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 165 5.8E-5 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS16845 6c22922d062f209ca89b16d275033314 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 73 84 5.8E-5 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS16845 6c22922d062f209ca89b16d275033314 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 126 134 5.8E-5 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS16845 6c22922d062f209ca89b16d275033314 256 Gene3D G3DSA:3.40.50.720 2 255 6.4E-55 T 28-03-2018 AM393_RS16845 6c22922d062f209ca89b16d275033314 256 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 133 161 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM393_RS10710 a1cb5924604112e17f4ef731ec3c012b 349 SMART SM00387 233 349 1.9E-33 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS10710 a1cb5924604112e17f4ef731ec3c012b 349 SMART SM00091 7 75 1.9E-7 T 28-03-2018 IPR000014 PAS domain AM393_RS10710 a1cb5924604112e17f4ef731ec3c012b 349 Gene3D G3DSA:3.30.450.20 9 103 4.5E-9 T 28-03-2018 AM393_RS10710 a1cb5924604112e17f4ef731ec3c012b 349 SUPERFAMILY SSF47384 121 186 3.14E-12 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM393_RS10710 a1cb5924604112e17f4ef731ec3c012b 349 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 234 347 5.1E-17 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS10710 a1cb5924604112e17f4ef731ec3c012b 349 Pfam PF00512 His Kinase A (phospho-acceptor) domain 131 186 3.0E-14 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM393_RS10710 a1cb5924604112e17f4ef731ec3c012b 349 Pfam PF00989 PAS fold 11 97 2.6E-5 T 28-03-2018 IPR013767 PAS fold GO:0006355 AM393_RS10710 a1cb5924604112e17f4ef731ec3c012b 349 SUPERFAMILY SSF55874 198 346 8.25E-38 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS10710 a1cb5924604112e17f4ef731ec3c012b 349 Gene3D G3DSA:1.10.287.130 118 187 4.7E-14 T 28-03-2018 AM393_RS10710 a1cb5924604112e17f4ef731ec3c012b 349 SMART SM00388 129 194 4.9E-13 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM393_RS10710 a1cb5924604112e17f4ef731ec3c012b 349 Gene3D G3DSA:3.30.565.10 194 349 5.2E-36 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS10710 a1cb5924604112e17f4ef731ec3c012b 349 SUPERFAMILY SSF55785 11 104 1.77E-5 T 28-03-2018 IPR000014 PAS domain AM393_RS10710 a1cb5924604112e17f4ef731ec3c012b 349 PRINTS PR00344 Bacterial sensor protein C-terminal signature 281 295 1.3E-11 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM393_RS10710 a1cb5924604112e17f4ef731ec3c012b 349 PRINTS PR00344 Bacterial sensor protein C-terminal signature 310 328 1.3E-11 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM393_RS10710 a1cb5924604112e17f4ef731ec3c012b 349 PRINTS PR00344 Bacterial sensor protein C-terminal signature 333 346 1.3E-11 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM393_RS00200 82768afec45afd446a5326d1b1ee2b27 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 68 5.5E-17 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS00200 82768afec45afd446a5326d1b1ee2b27 313 Gene3D G3DSA:1.10.10.10 7 89 4.4E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS00200 82768afec45afd446a5326d1b1ee2b27 313 Gene3D G3DSA:3.40.190.10 98 183 1.4E-10 T 28-03-2018 AM393_RS00200 82768afec45afd446a5326d1b1ee2b27 313 SUPERFAMILY SSF53850 99 299 1.12E-28 T 28-03-2018 AM393_RS00200 82768afec45afd446a5326d1b1ee2b27 313 Gene3D G3DSA:3.40.190.10 184 269 3.4E-11 T 28-03-2018 AM393_RS00200 82768afec45afd446a5326d1b1ee2b27 313 Pfam PF03466 LysR substrate binding domain 99 295 2.8E-30 T 28-03-2018 IPR005119 LysR, substrate-binding AM393_RS00200 82768afec45afd446a5326d1b1ee2b27 313 SUPERFAMILY SSF46785 8 113 1.15E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS00200 82768afec45afd446a5326d1b1ee2b27 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 6.9E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS00200 82768afec45afd446a5326d1b1ee2b27 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 6.9E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS00200 82768afec45afd446a5326d1b1ee2b27 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 6.9E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS27330 1dd2e2fe46fcd53be6db6cd45d4380ee 315 Gene3D G3DSA:3.30.70.270 162 315 2.5E-44 T 28-03-2018 AM393_RS27330 1dd2e2fe46fcd53be6db6cd45d4380ee 315 SMART SM00065 22 161 9.8E-7 T 28-03-2018 IPR003018 GAF domain GO:0005515 AM393_RS27330 1dd2e2fe46fcd53be6db6cd45d4380ee 315 Gene3D G3DSA:3.30.450.40 8 161 6.9E-20 T 28-03-2018 IPR029016 GAF domain-like AM393_RS27330 1dd2e2fe46fcd53be6db6cd45d4380ee 315 SUPERFAMILY SSF55781 24 150 1.29E-23 T 28-03-2018 IPR029016 GAF domain-like AM393_RS27330 1dd2e2fe46fcd53be6db6cd45d4380ee 315 SMART SM00267 149 315 1.7E-32 T 28-03-2018 IPR000160 GGDEF domain AM393_RS27330 1dd2e2fe46fcd53be6db6cd45d4380ee 315 SUPERFAMILY SSF55073 165 315 1.1E-35 T 28-03-2018 IPR029787 Nucleotide cyclase AM393_RS27330 1dd2e2fe46fcd53be6db6cd45d4380ee 315 Pfam PF01590 GAF domain 24 151 3.6E-9 T 28-03-2018 IPR003018 GAF domain GO:0005515 AM393_RS27330 1dd2e2fe46fcd53be6db6cd45d4380ee 315 Pfam PF00990 Diguanylate cyclase, GGDEF domain 160 315 9.2E-40 T 28-03-2018 IPR000160 GGDEF domain AM393_RS27330 1dd2e2fe46fcd53be6db6cd45d4380ee 315 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 159 315 2.9E-39 T 28-03-2018 IPR000160 GGDEF domain AM393_RS04880 d91a9e17edcddac6babb84497ebaa148 120 PIRSF PIRSF006113 1 120 1.1E-55 T 28-03-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein Reactome: R-HSA-1474151 AM393_RS04880 d91a9e17edcddac6babb84497ebaa148 120 SUPERFAMILY SSF55620 3 119 2.61E-40 T 28-03-2018 AM393_RS04880 d91a9e17edcddac6babb84497ebaa148 120 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 6 120 5.6E-34 T 28-03-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein Reactome: R-HSA-1474151 AM393_RS04880 d91a9e17edcddac6babb84497ebaa148 120 Gene3D G3DSA:3.30.479.10 1 120 3.9E-39 T 28-03-2018 AM393_RS04880 d91a9e17edcddac6babb84497ebaa148 120 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 5 96 3.8E-33 T 28-03-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein Reactome: R-HSA-1474151 AM393_RS04880 d91a9e17edcddac6babb84497ebaa148 120 TIGRFAM TIGR00039 6PTHBS: 6-pyruvoyl tetrahydropterin synthase/QueD family protein 3 120 8.0E-38 T 28-03-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein Reactome: R-HSA-1474151 AM393_RS03685 1407e0c743295c07d48e0626e377992a 140 Pfam PF07681 DoxX 16 97 1.1E-16 T 28-03-2018 IPR032808 DoxX family AM393_RS03925 b2840d11fe101fe37812fac69a80bf6b 111 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 4 91 3.4E-22 T 28-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 AM393_RS03925 b2840d11fe101fe37812fac69a80bf6b 111 SUPERFAMILY SSF69754 3 105 3.01E-33 T 28-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 AM393_RS03925 b2840d11fe101fe37812fac69a80bf6b 111 Gene3D G3DSA:3.30.160.100 2 92 5.6E-27 T 28-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 AM393_RS03925 b2840d11fe101fe37812fac69a80bf6b 111 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 97 1.1E-34 T 28-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 AM393_RS22650 3657b2a03cd27cbf8da5dab4929e311d 681 SUPERFAMILY SSF53720 5 500 9.82E-80 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AM393_RS22650 3657b2a03cd27cbf8da5dab4929e311d 681 Pfam PF01575 MaoC like domain 536 650 5.4E-32 T 28-03-2018 IPR002539 MaoC-like domain AM393_RS22650 3657b2a03cd27cbf8da5dab4929e311d 681 SUPERFAMILY SSF54637 525 676 4.83E-37 T 28-03-2018 IPR029069 HotDog domain AM393_RS22650 3657b2a03cd27cbf8da5dab4929e311d 681 TIGRFAM TIGR02278 PaaN-DH: phenylacetic acid degradation protein paaN 4 674 0.0 T 28-03-2018 IPR011966 Phenylacetic acid degradation protein PaaN KEGG: 00360+3.3.2.12+1.2.1.91 AM393_RS22650 3657b2a03cd27cbf8da5dab4929e311d 681 Pfam PF00171 Aldehyde dehydrogenase family 22 497 1.4E-59 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AM393_RS22650 3657b2a03cd27cbf8da5dab4929e311d 681 Gene3D G3DSA:3.10.129.10 499 673 1.4E-39 T 28-03-2018 AM393_RS22650 3657b2a03cd27cbf8da5dab4929e311d 681 Gene3D G3DSA:3.40.309.10 267 484 9.7E-37 T 28-03-2018 AM393_RS22650 3657b2a03cd27cbf8da5dab4929e311d 681 Gene3D G3DSA:3.40.605.10 1 266 3.4E-38 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AM393_RS15525 18f1879d3ca6df9978395aee5af19181 396 Pfam PF07690 Major Facilitator Superfamily 9 318 5.9E-39 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS15525 18f1879d3ca6df9978395aee5af19181 396 SUPERFAMILY SSF103473 3 381 2.49E-61 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS15525 18f1879d3ca6df9978395aee5af19181 396 Gene3D G3DSA:1.20.1250.20 3 191 2.4E-26 T 28-03-2018 AM393_RS15525 18f1879d3ca6df9978395aee5af19181 396 PRINTS PR01035 Tetracycline resistance protein signature 10 26 6.4E-5 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AM393_RS15525 18f1879d3ca6df9978395aee5af19181 396 PRINTS PR01035 Tetracycline resistance protein signature 158 178 6.4E-5 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AM393_RS15525 18f1879d3ca6df9978395aee5af19181 396 PRINTS PR01035 Tetracycline resistance protein signature 98 119 6.4E-5 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AM393_RS15525 18f1879d3ca6df9978395aee5af19181 396 PRINTS PR01035 Tetracycline resistance protein signature 40 59 6.4E-5 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AM393_RS15525 18f1879d3ca6df9978395aee5af19181 396 Gene3D G3DSA:1.20.1250.20 192 390 3.6E-23 T 28-03-2018 AM393_RS21205 8bd6f8b1201808b1808be3ac710f6bde 249 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 246 6.0E-60 T 28-03-2018 AM393_RS21205 8bd6f8b1201808b1808be3ac710f6bde 249 SUPERFAMILY SSF51735 7 246 3.06E-76 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS21205 8bd6f8b1201808b1808be3ac710f6bde 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 6.2E-5 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS21205 8bd6f8b1201808b1808be3ac710f6bde 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 6.2E-5 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS21205 8bd6f8b1201808b1808be3ac710f6bde 249 Gene3D G3DSA:3.40.50.720 1 51 1.7E-12 T 28-03-2018 AM393_RS21205 8bd6f8b1201808b1808be3ac710f6bde 249 Gene3D G3DSA:3.40.50.720 52 248 9.4E-56 T 28-03-2018 AM393_RS21205 8bd6f8b1201808b1808be3ac710f6bde 249 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 182 1.2E-4 T 28-03-2018 AM393_RS21205 8bd6f8b1201808b1808be3ac710f6bde 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.3E-38 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS21205 8bd6f8b1201808b1808be3ac710f6bde 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 1.3E-38 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS21205 8bd6f8b1201808b1808be3ac710f6bde 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 1.3E-38 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS21205 8bd6f8b1201808b1808be3ac710f6bde 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 1.3E-38 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS21205 8bd6f8b1201808b1808be3ac710f6bde 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 230 1.3E-38 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS21205 8bd6f8b1201808b1808be3ac710f6bde 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 1.3E-38 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS21205 8bd6f8b1201808b1808be3ac710f6bde 249 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM393_RS12900 cf151af25c8e0311f709d2984998671d 216 SUPERFAMILY SSF51366 2 215 1.03E-39 T 28-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AM393_RS12900 cf151af25c8e0311f709d2984998671d 216 Gene3D G3DSA:3.20.20.70 1 216 4.2E-27 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM393_RS12900 cf151af25c8e0311f709d2984998671d 216 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 5 206 1.5E-27 T 28-03-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AM393_RS12900 cf151af25c8e0311f709d2984998671d 216 SMART SM00934 5 207 1.5E-34 T 28-03-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AM393_RS20885 688cad055355e2b4ced88ffe38c57e53 303 Gene3D G3DSA:3.30.420.40 1 112 1.7E-25 T 28-03-2018 AM393_RS20885 688cad055355e2b4ced88ffe38c57e53 303 SUPERFAMILY SSF53067 1 301 1.46E-57 T 28-03-2018 AM393_RS20885 688cad055355e2b4ced88ffe38c57e53 303 Gene3D G3DSA:3.30.420.40 113 303 1.2E-47 T 28-03-2018 AM393_RS20885 688cad055355e2b4ced88ffe38c57e53 303 Hamap MF_01271 N-acetyl-D-glucosamine kinase [nagK]. 1 303 62.413 T 28-03-2018 IPR023505 N-acetyl-D-glucosamine kinase GO:0045127 KEGG: 00520+2.7.1.59|MetaCyc: PWY-6517|MetaCyc: PWY-6906 AM393_RS20885 688cad055355e2b4ced88ffe38c57e53 303 ProSitePatterns PS01125 ROK family signature. 130 157 - T 28-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 AM393_RS20885 688cad055355e2b4ced88ffe38c57e53 303 Pfam PF00480 ROK family 2 300 5.7E-67 T 28-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 AM393_RS15125 67cc900bb7926727b3c769204daf68a6 238 Pfam PF03749 Sugar fermentation stimulation protein 13 225 1.9E-76 T 28-03-2018 IPR005224 Sugar fermentation stimulation protein AM393_RS15125 67cc900bb7926727b3c769204daf68a6 238 TIGRFAM TIGR00230 sfsA: sugar fermentation stimulation protein 3 233 1.3E-89 T 28-03-2018 IPR005224 Sugar fermentation stimulation protein AM393_RS15125 67cc900bb7926727b3c769204daf68a6 238 Hamap MF_00095 Sugar fermentation stimulation protein A [sfsA]. 1 234 58.552 T 28-03-2018 IPR005224 Sugar fermentation stimulation protein AM393_RS21665 f4c2d591ebe798a2463adcabed3fd1ae 300 SUPERFAMILY SSF55120 69 234 4.52E-43 T 28-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM393_RS21665 f4c2d591ebe798a2463adcabed3fd1ae 300 Gene3D G3DSA:3.30.70.1560 151 219 1.8E-22 T 28-03-2018 AM393_RS21665 f4c2d591ebe798a2463adcabed3fd1ae 300 Gene3D G3DSA:3.30.70.580 63 150 2.3E-17 T 28-03-2018 AM393_RS21665 f4c2d591ebe798a2463adcabed3fd1ae 300 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 73 233 4.7E-64 T 28-03-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 AM393_RS21665 f4c2d591ebe798a2463adcabed3fd1ae 300 SUPERFAMILY SSF55174 5 98 1.03E-12 T 28-03-2018 AM393_RS21665 f4c2d591ebe798a2463adcabed3fd1ae 300 Gene3D G3DSA:3.10.290.10 1 61 1.3E-13 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AM393_RS21665 f4c2d591ebe798a2463adcabed3fd1ae 300 SMART SM00363 3 74 5.6E-10 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AM393_RS21665 f4c2d591ebe798a2463adcabed3fd1ae 300 Pfam PF00849 RNA pseudouridylate synthase 69 199 5.2E-16 T 28-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM393_RS21665 f4c2d591ebe798a2463adcabed3fd1ae 300 Pfam PF01479 S4 domain 4 43 2.6E-10 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AM393_RS21665 f4c2d591ebe798a2463adcabed3fd1ae 300 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 107 121 - T 28-03-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 AM393_RS15230 460e08908ca2a97f8c6611c17627724f 735 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 79 733 1.2E-151 T 28-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AM393_RS15230 460e08908ca2a97f8c6611c17627724f 735 Gene3D G3DSA:2.40.170.20 195 735 3.7E-80 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM393_RS15230 460e08908ca2a97f8c6611c17627724f 735 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 48 - T 28-03-2018 IPR010916 TonB box, conserved site AM393_RS15230 460e08908ca2a97f8c6611c17627724f 735 Pfam PF07715 TonB-dependent Receptor Plug Domain 78 182 3.7E-22 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM393_RS15230 460e08908ca2a97f8c6611c17627724f 735 Pfam PF00593 TonB dependent receptor 255 734 1.5E-59 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM393_RS15230 460e08908ca2a97f8c6611c17627724f 735 Gene3D G3DSA:2.170.130.10 23 189 2.2E-29 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM393_RS15230 460e08908ca2a97f8c6611c17627724f 735 SUPERFAMILY SSF56935 33 735 1.14E-138 T 28-03-2018 AM393_RS11565 5baf52a7ba7a62abece770d10edfac87 233 Gene3D G3DSA:2.40.30.10 2 98 1.0E-17 T 28-03-2018 AM393_RS11565 5baf52a7ba7a62abece770d10edfac87 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 31 43 6.2E-14 T 28-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AM393_RS11565 5baf52a7ba7a62abece770d10edfac87 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 107 126 6.2E-14 T 28-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AM393_RS11565 5baf52a7ba7a62abece770d10edfac87 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 47 54 6.2E-14 T 28-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AM393_RS11565 5baf52a7ba7a62abece770d10edfac87 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 91 100 6.2E-14 T 28-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AM393_RS11565 5baf52a7ba7a62abece770d10edfac87 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 132 141 6.2E-14 T 28-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AM393_RS11565 5baf52a7ba7a62abece770d10edfac87 233 Pfam PF00970 Oxidoreductase FAD-binding domain 6 95 7.4E-5 T 28-03-2018 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 AM393_RS11565 5baf52a7ba7a62abece770d10edfac87 233 SUPERFAMILY SSF52343 100 231 1.31E-35 T 28-03-2018 AM393_RS11565 5baf52a7ba7a62abece770d10edfac87 233 Pfam PF00175 Oxidoreductase NAD-binding domain 108 211 5.3E-21 T 28-03-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AM393_RS11565 5baf52a7ba7a62abece770d10edfac87 233 Gene3D G3DSA:3.40.50.80 99 233 8.7E-25 T 28-03-2018 AM393_RS11565 5baf52a7ba7a62abece770d10edfac87 233 SUPERFAMILY SSF63380 3 97 2.15E-21 T 28-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AM393_RS10350 e05d370bdc9400f9ae8133c681457c18 804 SUPERFAMILY SSF54211 221 392 3.79E-62 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM393_RS10350 e05d370bdc9400f9ae8133c681457c18 804 PRINTS PR01159 DNA gyrase subunit B signature 470 479 3.2E-80 T 28-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AM393_RS10350 e05d370bdc9400f9ae8133c681457c18 804 PRINTS PR01159 DNA gyrase subunit B signature 757 769 3.2E-80 T 28-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AM393_RS10350 e05d370bdc9400f9ae8133c681457c18 804 PRINTS PR01159 DNA gyrase subunit B signature 196 209 3.2E-80 T 28-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AM393_RS10350 e05d370bdc9400f9ae8133c681457c18 804 PRINTS PR01159 DNA gyrase subunit B signature 312 328 3.2E-80 T 28-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AM393_RS10350 e05d370bdc9400f9ae8133c681457c18 804 PRINTS PR01159 DNA gyrase subunit B signature 773 789 3.2E-80 T 28-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AM393_RS10350 e05d370bdc9400f9ae8133c681457c18 804 PRINTS PR01159 DNA gyrase subunit B signature 5 15 3.2E-80 T 28-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AM393_RS10350 e05d370bdc9400f9ae8133c681457c18 804 PRINTS PR01159 DNA gyrase subunit B signature 181 196 3.2E-80 T 28-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AM393_RS10350 e05d370bdc9400f9ae8133c681457c18 804 PRINTS PR01159 DNA gyrase subunit B signature 220 242 3.2E-80 T 28-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AM393_RS10350 e05d370bdc9400f9ae8133c681457c18 804 PRINTS PR01159 DNA gyrase subunit B signature 360 374 3.2E-80 T 28-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AM393_RS10350 e05d370bdc9400f9ae8133c681457c18 804 PRINTS PR01159 DNA gyrase subunit B signature 374 394 3.2E-80 T 28-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AM393_RS10350 e05d370bdc9400f9ae8133c681457c18 804 SUPERFAMILY SSF55874 4 220 8.77E-77 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS10350 e05d370bdc9400f9ae8133c681457c18 804 Gene3D G3DSA:3.30.565.10 17 220 1.8E-75 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS10350 e05d370bdc9400f9ae8133c681457c18 804 SMART SM00433 35 797 2.3E-282 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM393_RS10350 e05d370bdc9400f9ae8133c681457c18 804 Pfam PF01751 Toprim domain 419 531 4.1E-18 T 28-03-2018 IPR006171 TOPRIM domain AM393_RS10350 e05d370bdc9400f9ae8133c681457c18 804 SMART SM00387 31 175 7.8E-30 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS10350 e05d370bdc9400f9ae8133c681457c18 804 ProSitePatterns PS00177 DNA topoisomerase II signature. 422 430 - T 28-03-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM393_RS10350 e05d370bdc9400f9ae8133c681457c18 804 Pfam PF00204 DNA gyrase B 221 390 1.6E-59 T 28-03-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM393_RS10350 e05d370bdc9400f9ae8133c681457c18 804 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 732 793 5.3E-30 T 28-03-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 AM393_RS10350 e05d370bdc9400f9ae8133c681457c18 804 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 32 174 2.5E-21 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS10350 e05d370bdc9400f9ae8133c681457c18 804 PRINTS PR00418 DNA topoisomerase II family signature 487 503 8.1E-71 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM393_RS10350 e05d370bdc9400f9ae8133c681457c18 804 PRINTS PR00418 DNA topoisomerase II family signature 525 537 8.1E-71 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM393_RS10350 e05d370bdc9400f9ae8133c681457c18 804 PRINTS PR00418 DNA topoisomerase II family signature 113 127 8.1E-71 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM393_RS10350 e05d370bdc9400f9ae8133c681457c18 804 PRINTS PR00418 DNA topoisomerase II family signature 268 281 8.1E-71 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM393_RS10350 e05d370bdc9400f9ae8133c681457c18 804 PRINTS PR00418 DNA topoisomerase II family signature 505 522 8.1E-71 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM393_RS10350 e05d370bdc9400f9ae8133c681457c18 804 PRINTS PR00418 DNA topoisomerase II family signature 35 50 8.1E-71 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM393_RS10350 e05d370bdc9400f9ae8133c681457c18 804 PRINTS PR00418 DNA topoisomerase II family signature 70 83 8.1E-71 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM393_RS10350 e05d370bdc9400f9ae8133c681457c18 804 PRINTS PR00418 DNA topoisomerase II family signature 736 752 8.1E-71 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM393_RS10350 e05d370bdc9400f9ae8133c681457c18 804 PRINTS PR00418 DNA topoisomerase II family signature 420 434 8.1E-71 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM393_RS10350 e05d370bdc9400f9ae8133c681457c18 804 SUPERFAMILY SSF56719 730 795 7.32E-87 T 28-03-2018 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 AM393_RS10350 e05d370bdc9400f9ae8133c681457c18 804 SUPERFAMILY SSF56719 394 560 7.32E-87 T 28-03-2018 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 AM393_RS10350 e05d370bdc9400f9ae8133c681457c18 804 Gene3D G3DSA:3.40.50.670 402 801 3.3E-108 T 28-03-2018 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM393_RS10350 e05d370bdc9400f9ae8133c681457c18 804 Gene3D G3DSA:3.30.230.10 221 392 2.4E-66 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AM393_RS10350 e05d370bdc9400f9ae8133c681457c18 804 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 5 804 0.0 T 28-03-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AM393_RS10350 e05d370bdc9400f9ae8133c681457c18 804 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 2 804 115.323 T 28-03-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AM393_RS26470 c867cc91b20dc7b147448a9a665e93d1 266 PIRSF PIRSF002854 1 266 2.0E-91 T 28-03-2018 IPR004872 Lipoprotein NlpA family AM393_RS26470 c867cc91b20dc7b147448a9a665e93d1 266 SUPERFAMILY SSF53850 27 266 1.12E-71 T 28-03-2018 AM393_RS26470 c867cc91b20dc7b147448a9a665e93d1 266 Pfam PF03180 NLPA lipoprotein 28 266 3.5E-84 T 28-03-2018 IPR004872 Lipoprotein NlpA family AM393_RS26470 c867cc91b20dc7b147448a9a665e93d1 266 Gene3D G3DSA:3.40.190.10 20 120 1.1E-18 T 28-03-2018 AM393_RS26470 c867cc91b20dc7b147448a9a665e93d1 266 Gene3D G3DSA:3.40.190.10 121 266 1.1E-42 T 28-03-2018 AM393_RS26470 c867cc91b20dc7b147448a9a665e93d1 266 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 16 266 2.0E-98 T 28-03-2018 IPR004872 Lipoprotein NlpA family AM393_RS02280 84744acde8788412ce63e324194335b8 235 SMART SM00014 95 211 1.7E-20 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AM393_RS02280 84744acde8788412ce63e324194335b8 235 Hamap MF_01945 Lipid A 1-diphosphate synthase [lpxT]. 2 234 41.461 T 28-03-2018 IPR032908 Lipid A 1-diphosphate synthase GO:0005886|GO:0043165|GO:0050380 AM393_RS02280 84744acde8788412ce63e324194335b8 235 Pfam PF01569 PAP2 superfamily 97 210 5.8E-13 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AM393_RS02280 84744acde8788412ce63e324194335b8 235 SUPERFAMILY SSF48317 3 224 6.67E-30 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AM393_RS02280 84744acde8788412ce63e324194335b8 235 Gene3D G3DSA:1.20.144.10 17 223 4.2E-11 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AM393_RS04515 4c1b544f8ab186f9de04cc05244d342b 337 SUPERFAMILY SSF47413 1 59 5.63E-19 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM393_RS04515 4c1b544f8ab186f9de04cc05244d342b 337 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 7.4E-21 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM393_RS04515 4c1b544f8ab186f9de04cc05244d342b 337 Gene3D G3DSA:3.40.50.2300 56 177 2.4E-26 T 28-03-2018 AM393_RS04515 4c1b544f8ab186f9de04cc05244d342b 337 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 28-03-2018 AM393_RS04515 4c1b544f8ab186f9de04cc05244d342b 337 SMART SM00354 1 71 2.2E-35 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM393_RS04515 4c1b544f8ab186f9de04cc05244d342b 337 SUPERFAMILY SSF53822 60 332 1.05E-69 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AM393_RS04515 4c1b544f8ab186f9de04cc05244d342b 337 Gene3D G3DSA:3.40.50.2300 178 315 3.0E-41 T 28-03-2018 AM393_RS04515 4c1b544f8ab186f9de04cc05244d342b 337 Pfam PF13377 Periplasmic binding protein-like domain 171 330 6.5E-34 T 28-03-2018 AM393_RS04515 4c1b544f8ab186f9de04cc05244d342b 337 Gene3D G3DSA:1.10.260.40 2 55 6.3E-23 T 28-03-2018 AM393_RS08235 4feffea74a7b86a96c498c445aa4994e 59 SUPERFAMILY SSF55129 3 59 5.1E-21 T 28-03-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain AM393_RS08235 4feffea74a7b86a96c498c445aa4994e 59 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 5 59 5.0E-28 T 28-03-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS08235 4feffea74a7b86a96c498c445aa4994e 59 Pfam PF00327 Ribosomal protein L30p/L7e 5 54 9.9E-19 T 28-03-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain AM393_RS08235 4feffea74a7b86a96c498c445aa4994e 59 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 2 59 21.935 T 28-03-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS08235 4feffea74a7b86a96c498c445aa4994e 59 Gene3D G3DSA:3.30.1390.20 5 59 1.7E-23 T 28-03-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain AM393_RS08235 4feffea74a7b86a96c498c445aa4994e 59 PIRSF PIRSF002211 1 59 2.8E-29 T 28-03-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS08235 4feffea74a7b86a96c498c445aa4994e 59 ProSitePatterns PS00634 Ribosomal protein L30 signature. 23 55 - T 28-03-2018 IPR018038 Ribosomal protein L30, conserved site AM393_RS15055 df61008410855a760baec43a3ec56c5b 796 ProSitePatterns PS00363 Bacterial quinoprotein dehydrogenases signature 1. 167 195 - T 28-03-2018 IPR001479 Quinoprotein dehydrogenase, conserved site GO:0030288|GO:0055114 AM393_RS15055 df61008410855a760baec43a3ec56c5b 796 Gene3D G3DSA:2.140.10.10 666 790 4.2E-14 T 28-03-2018 AM393_RS15055 df61008410855a760baec43a3ec56c5b 796 Gene3D G3DSA:2.140.10.10 113 607 1.3E-86 T 28-03-2018 AM393_RS15055 df61008410855a760baec43a3ec56c5b 796 TIGRFAM TIGR03074 PQQ_membr_DH: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family 15 792 0.0 T 28-03-2018 IPR017511 PQQ-dependent membrane bound dehydrogenase GO:0016021|GO:0016614|GO:0048038|GO:0055114 AM393_RS15055 df61008410855a760baec43a3ec56c5b 796 ProSitePatterns PS00364 Bacterial quinoprotein dehydrogenases signature 2. 404 425 - T 28-03-2018 IPR001479 Quinoprotein dehydrogenase, conserved site GO:0030288|GO:0055114 AM393_RS15055 df61008410855a760baec43a3ec56c5b 796 Pfam PF01011 PQQ enzyme repeat 225 260 1.5E-8 T 28-03-2018 IPR002372 Pyrrolo-quinoline quinone repeat AM393_RS15055 df61008410855a760baec43a3ec56c5b 796 Pfam PF01011 PQQ enzyme repeat 442 468 1.3E-6 T 28-03-2018 IPR002372 Pyrrolo-quinoline quinone repeat AM393_RS15055 df61008410855a760baec43a3ec56c5b 796 Pfam PF01011 PQQ enzyme repeat 358 387 4.4E-5 T 28-03-2018 IPR002372 Pyrrolo-quinoline quinone repeat AM393_RS15055 df61008410855a760baec43a3ec56c5b 796 Pfam PF01011 PQQ enzyme repeat 664 696 2.5E-7 T 28-03-2018 IPR002372 Pyrrolo-quinoline quinone repeat AM393_RS15055 df61008410855a760baec43a3ec56c5b 796 Pfam PF01011 PQQ enzyme repeat 721 758 5.9E-7 T 28-03-2018 IPR002372 Pyrrolo-quinoline quinone repeat AM393_RS15055 df61008410855a760baec43a3ec56c5b 796 Pfam PF01011 PQQ enzyme repeat 289 320 9.7E-5 T 28-03-2018 IPR002372 Pyrrolo-quinoline quinone repeat AM393_RS15055 df61008410855a760baec43a3ec56c5b 796 SUPERFAMILY SSF50998 161 521 1.83E-160 T 28-03-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AM393_RS15055 df61008410855a760baec43a3ec56c5b 796 SUPERFAMILY SSF50998 557 792 1.83E-160 T 28-03-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AM393_RS15055 df61008410855a760baec43a3ec56c5b 796 SMART SM00564 220 251 1.8E-6 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AM393_RS15055 df61008410855a760baec43a3ec56c5b 796 SMART SM00564 282 314 84.0 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AM393_RS15055 df61008410855a760baec43a3ec56c5b 796 SMART SM00564 715 748 0.0015 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AM393_RS15055 df61008410855a760baec43a3ec56c5b 796 SMART SM00564 479 512 490.0 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AM393_RS15055 df61008410855a760baec43a3ec56c5b 796 SMART SM00564 401 458 310.0 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AM393_RS15055 df61008410855a760baec43a3ec56c5b 796 SMART SM00564 339 380 0.012 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AM393_RS29025 10dff0d902d36b591b640edc4016c417 561 SUPERFAMILY SSF55424 436 559 7.22E-33 T 28-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 AM393_RS29025 10dff0d902d36b591b640edc4016c417 561 PIRSF PIRSF000350 1 561 7.1E-264 T 28-03-2018 AM393_RS29025 10dff0d902d36b591b640edc4016c417 561 PRINTS PR00945 Mercuric reductase class II signature 237 254 1.7E-92 T 28-03-2018 AM393_RS29025 10dff0d902d36b591b640edc4016c417 561 PRINTS PR00945 Mercuric reductase class II signature 534 553 1.7E-92 T 28-03-2018 AM393_RS29025 10dff0d902d36b591b640edc4016c417 561 PRINTS PR00945 Mercuric reductase class II signature 110 128 1.7E-92 T 28-03-2018 AM393_RS29025 10dff0d902d36b591b640edc4016c417 561 PRINTS PR00945 Mercuric reductase class II signature 13 23 1.7E-92 T 28-03-2018 AM393_RS29025 10dff0d902d36b591b640edc4016c417 561 PRINTS PR00945 Mercuric reductase class II signature 272 289 1.7E-92 T 28-03-2018 AM393_RS29025 10dff0d902d36b591b640edc4016c417 561 PRINTS PR00945 Mercuric reductase class II signature 145 164 1.7E-92 T 28-03-2018 AM393_RS29025 10dff0d902d36b591b640edc4016c417 561 PRINTS PR00945 Mercuric reductase class II signature 469 489 1.7E-92 T 28-03-2018 AM393_RS29025 10dff0d902d36b591b640edc4016c417 561 PRINTS PR00945 Mercuric reductase class II signature 292 307 1.7E-92 T 28-03-2018 AM393_RS29025 10dff0d902d36b591b640edc4016c417 561 Gene3D G3DSA:3.50.50.60 256 305 3.7E-8 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS29025 10dff0d902d36b591b640edc4016c417 561 Pfam PF00403 Heavy-metal-associated domain 3 43 8.1E-10 T 28-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AM393_RS29025 10dff0d902d36b591b640edc4016c417 561 Gene3D G3DSA:3.30.70.100 1 69 1.6E-18 T 28-03-2018 AM393_RS29025 10dff0d902d36b591b640edc4016c417 561 SUPERFAMILY SSF55008 2 70 2.62E-17 T 28-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AM393_RS29025 10dff0d902d36b591b640edc4016c417 561 TIGRFAM TIGR02053 MerA: mercury(II) reductase 100 561 9.9E-187 T 28-03-2018 IPR021179 Mercury(II) reductase GO:0016152|GO:0016491|GO:0045340|GO:0050660|GO:0050661|GO:0050787|GO:0055114 AM393_RS29025 10dff0d902d36b591b640edc4016c417 561 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 100 418 2.0E-64 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS29025 10dff0d902d36b591b640edc4016c417 561 Gene3D G3DSA:3.50.50.60 306 435 1.2E-23 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS29025 10dff0d902d36b591b640edc4016c417 561 Gene3D G3DSA:3.50.50.60 96 255 2.4E-28 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS29025 10dff0d902d36b591b640edc4016c417 561 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 437 545 2.0E-28 T 28-03-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AM393_RS29025 10dff0d902d36b591b640edc4016c417 561 SUPERFAMILY SSF51905 98 427 5.47E-54 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS29025 10dff0d902d36b591b640edc4016c417 561 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 133 143 - T 28-03-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 AM393_RS29025 10dff0d902d36b591b640edc4016c417 561 ProSitePatterns PS01047 Heavy-metal-associated domain. 6 35 - T 28-03-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 AM393_RS29025 10dff0d902d36b591b640edc4016c417 561 Gene3D G3DSA:3.30.390.30 436 561 4.4E-35 T 28-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 AM393_RS16875 6f919f378fb2ddee1a62a15fc3986317 355 Gene3D G3DSA:3.30.1490.20 94 155 4.9E-11 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AM393_RS16875 6f919f378fb2ddee1a62a15fc3986317 355 Pfam PF02222 ATP-grasp domain 88 254 2.3E-55 T 28-03-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type AM393_RS16875 6f919f378fb2ddee1a62a15fc3986317 355 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 3 329 4.2E-113 T 28-03-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 AM393_RS16875 6f919f378fb2ddee1a62a15fc3986317 355 SUPERFAMILY SSF52440 2 76 1.02E-15 T 28-03-2018 IPR016185 Pre-ATP-grasp domain AM393_RS16875 6f919f378fb2ddee1a62a15fc3986317 355 Gene3D G3DSA:3.40.50.20 1 69 7.8E-16 T 28-03-2018 AM393_RS16875 6f919f378fb2ddee1a62a15fc3986317 355 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 3 325 33.71 T 28-03-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 AM393_RS16875 6f919f378fb2ddee1a62a15fc3986317 355 SUPERFAMILY SSF51246 278 353 4.55E-21 T 28-03-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 AM393_RS16875 6f919f378fb2ddee1a62a15fc3986317 355 Gene3D G3DSA:3.30.470.20 156 342 6.2E-32 T 28-03-2018 AM393_RS16875 6f919f378fb2ddee1a62a15fc3986317 355 SUPERFAMILY SSF56059 79 274 3.36E-57 T 28-03-2018 AM393_RS15690 bbb1aa5a3cb08e6a57de464eeb30b6cb 427 TIGRFAM TIGR00700 GABAtrnsam: 4-aminobutyrate transaminase 10 422 4.7E-161 T 28-03-2018 IPR004632 4-aminobutyrate aminotransferase, bacterial GO:0003867|GO:0009448 AM393_RS15690 bbb1aa5a3cb08e6a57de464eeb30b6cb 427 Gene3D G3DSA:3.90.1150.10 306 427 2.0E-28 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM393_RS15690 bbb1aa5a3cb08e6a57de464eeb30b6cb 427 PIRSF PIRSF000521 28 129 0.0015 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM393_RS15690 bbb1aa5a3cb08e6a57de464eeb30b6cb 427 PIRSF PIRSF000521 124 424 4.5E-46 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM393_RS15690 bbb1aa5a3cb08e6a57de464eeb30b6cb 427 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 236 273 - T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM393_RS15690 bbb1aa5a3cb08e6a57de464eeb30b6cb 427 Gene3D G3DSA:3.90.1150.10 1 156 1.2E-42 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM393_RS15690 bbb1aa5a3cb08e6a57de464eeb30b6cb 427 Gene3D G3DSA:3.40.640.10 174 305 5.9E-46 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM393_RS15690 bbb1aa5a3cb08e6a57de464eeb30b6cb 427 SUPERFAMILY SSF53383 21 423 6.65E-137 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM393_RS15690 bbb1aa5a3cb08e6a57de464eeb30b6cb 427 Pfam PF00202 Aminotransferase class-III 17 420 2.9E-144 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM393_RS17590 aac97feedfa1c27f2dd50d90f9deb9a0 732 Gene3D G3DSA:2.40.170.20 197 732 5.7E-61 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM393_RS17590 aac97feedfa1c27f2dd50d90f9deb9a0 732 Pfam PF00593 TonB dependent receptor 251 730 1.1E-31 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM393_RS17590 aac97feedfa1c27f2dd50d90f9deb9a0 732 SUPERFAMILY SSF56935 76 732 2.24E-102 T 28-03-2018 AM393_RS17590 aac97feedfa1c27f2dd50d90f9deb9a0 732 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 48 - T 28-03-2018 IPR010916 TonB box, conserved site AM393_RS17590 aac97feedfa1c27f2dd50d90f9deb9a0 732 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 85 732 6.2E-121 T 28-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AM393_RS17590 aac97feedfa1c27f2dd50d90f9deb9a0 732 Pfam PF07715 TonB-dependent Receptor Plug Domain 83 180 9.2E-13 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM393_RS17590 aac97feedfa1c27f2dd50d90f9deb9a0 732 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 715 732 - T 28-03-2018 IPR010917 TonB-dependent receptor, conserved site AM393_RS17590 aac97feedfa1c27f2dd50d90f9deb9a0 732 Gene3D G3DSA:2.170.130.10 33 196 7.5E-18 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM393_RS13090 8534a67bab32227494c9ea8d2a8dd1f7 183 Gene3D G3DSA:1.10.60.30 38 106 1.7E-24 T 28-03-2018 AM393_RS13090 8534a67bab32227494c9ea8d2a8dd1f7 183 Pfam PF04751 Protein of unknown function (DUF615) 26 176 1.2E-56 T 28-03-2018 IPR006839 Ribosome-associated, YjgA AM393_RS13090 8534a67bab32227494c9ea8d2a8dd1f7 183 Hamap MF_00765 UPF0307 protein YjgA [yjgA]. 16 180 24.291 T 28-03-2018 IPR006839 Ribosome-associated, YjgA AM393_RS13090 8534a67bab32227494c9ea8d2a8dd1f7 183 SUPERFAMILY SSF158710 37 179 3.53E-52 T 28-03-2018 IPR023153 PSPTO4464-like domain AM393_RS13090 8534a67bab32227494c9ea8d2a8dd1f7 183 PIRSF PIRSF016183 10 183 7.6E-73 T 28-03-2018 IPR006839 Ribosome-associated, YjgA AM393_RS13090 8534a67bab32227494c9ea8d2a8dd1f7 183 Gene3D G3DSA:1.10.60.30 111 183 1.9E-28 T 28-03-2018 AM393_RS10355 254f34a43266b3fbe3a6e9103d271058 357 ProSitePatterns PS00617 RecF protein signature 1. 117 137 - T 28-03-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 AM393_RS10355 254f34a43266b3fbe3a6e9103d271058 357 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 354 1.5E-40 T 28-03-2018 IPR003395 RecF/RecN/SMC, N-terminal AM393_RS10355 254f34a43266b3fbe3a6e9103d271058 357 ProSitePatterns PS00618 RecF protein signature 2. 298 316 - T 28-03-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 AM393_RS10355 254f34a43266b3fbe3a6e9103d271058 357 SUPERFAMILY SSF52540 1 343 3.97E-39 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS10355 254f34a43266b3fbe3a6e9103d271058 357 Gene3D G3DSA:3.40.50.300 1 357 6.0E-31 T 28-03-2018 AM393_RS10355 254f34a43266b3fbe3a6e9103d271058 357 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 357 96.961 T 28-03-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 AM393_RS10355 254f34a43266b3fbe3a6e9103d271058 357 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 355 1.7E-136 T 28-03-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 AM393_RS07565 6fb24ff2ffdcc0cb00e222c2aa43a3a3 97 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 3 97 3.8E-41 T 28-03-2018 IPR017924 RNA-binding protein YhbY GO:0003723 AM393_RS07565 6fb24ff2ffdcc0cb00e222c2aa43a3a3 97 SMART SM01103 3 86 1.7E-39 T 28-03-2018 IPR001890 RNA-binding, CRM domain GO:0003723 AM393_RS07565 6fb24ff2ffdcc0cb00e222c2aa43a3a3 97 Gene3D G3DSA:3.30.110.60 2 97 7.3E-28 T 28-03-2018 IPR001890 RNA-binding, CRM domain GO:0003723 AM393_RS07565 6fb24ff2ffdcc0cb00e222c2aa43a3a3 97 SUPERFAMILY SSF75471 1 95 2.09E-30 T 28-03-2018 IPR001890 RNA-binding, CRM domain GO:0003723 AM393_RS07565 6fb24ff2ffdcc0cb00e222c2aa43a3a3 97 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 9 97 1.0E-42 T 28-03-2018 IPR001890 RNA-binding, CRM domain GO:0003723 AM393_RS07565 6fb24ff2ffdcc0cb00e222c2aa43a3a3 97 Pfam PF01985 CRS1 / YhbY (CRM) domain 3 86 5.6E-22 T 28-03-2018 IPR001890 RNA-binding, CRM domain GO:0003723 AM393_RS05710 1545ecf4f6f6703ab706f55ba8dacdcb 301 Gene3D G3DSA:2.60.40.1090 23 176 1.2E-62 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM393_RS05710 1545ecf4f6f6703ab706f55ba8dacdcb 301 Pfam PF09160 FimH, mannose binding 25 169 1.5E-62 T 28-03-2018 IPR015243 FimH, mannose-binding domain AM393_RS05710 1545ecf4f6f6703ab706f55ba8dacdcb 301 SUPERFAMILY SSF49401 23 180 6.46E-65 T 28-03-2018 IPR008966 Adhesion domain AM393_RS05710 1545ecf4f6f6703ab706f55ba8dacdcb 301 SUPERFAMILY SSF49401 182 301 2.93E-25 T 28-03-2018 IPR008966 Adhesion domain AM393_RS05710 1545ecf4f6f6703ab706f55ba8dacdcb 301 Gene3D G3DSA:2.60.40.1090 177 301 5.7E-17 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM393_RS05710 1545ecf4f6f6703ab706f55ba8dacdcb 301 Pfam PF00419 Fimbrial protein 177 301 1.7E-8 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM393_RS15475 1de77b1fba300c2cc8e568354d3e3da6 343 SUPERFAMILY SSF55021 248 343 1.72E-25 T 28-03-2018 AM393_RS15475 1de77b1fba300c2cc8e568354d3e3da6 343 TIGRFAM TIGR02314 ABC_MetN: D-methionine ABC transporter, ATP-binding protein 1 343 8.5E-205 T 28-03-2018 IPR012692 ABC transporter, methionine import, ATP-binding protein MetN, proteobacteria GO:0005524|GO:0009276|GO:0048473|GO:0048474 AM393_RS15475 1de77b1fba300c2cc8e568354d3e3da6 343 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS15475 1de77b1fba300c2cc8e568354d3e3da6 343 Gene3D G3DSA:3.40.50.300 1 254 1.2E-77 T 28-03-2018 AM393_RS15475 1de77b1fba300c2cc8e568354d3e3da6 343 Pfam PF00005 ABC transporter 21 169 7.7E-37 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS15475 1de77b1fba300c2cc8e568354d3e3da6 343 SUPERFAMILY SSF52540 1 240 4.71E-85 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS15475 1de77b1fba300c2cc8e568354d3e3da6 343 Pfam PF09383 NIL domain 268 339 2.0E-19 T 28-03-2018 IPR018449 NIL domain AM393_RS15475 1de77b1fba300c2cc8e568354d3e3da6 343 SMART SM00930 265 340 2.1E-24 T 28-03-2018 IPR018449 NIL domain AM393_RS15475 1de77b1fba300c2cc8e568354d3e3da6 343 SMART SM00382 30 217 2.0E-13 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS15475 1de77b1fba300c2cc8e568354d3e3da6 343 Gene3D G3DSA:3.30.70.260 255 343 4.1E-26 T 28-03-2018 AM393_RS25720 edbce37a989d2929e36f6a4ca1e2f1b1 311 Gene3D G3DSA:3.40.190.10 88 174 1.8E-13 T 28-03-2018 AM393_RS25720 edbce37a989d2929e36f6a4ca1e2f1b1 311 Gene3D G3DSA:3.40.190.10 175 264 1.3E-25 T 28-03-2018 AM393_RS25720 edbce37a989d2929e36f6a4ca1e2f1b1 311 SUPERFAMILY SSF46785 4 84 5.33E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS25720 edbce37a989d2929e36f6a4ca1e2f1b1 311 SUPERFAMILY SSF53850 88 292 5.97E-48 T 28-03-2018 AM393_RS25720 edbce37a989d2929e36f6a4ca1e2f1b1 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 5.6E-17 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS25720 edbce37a989d2929e36f6a4ca1e2f1b1 311 Gene3D G3DSA:1.10.10.10 3 84 4.9E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS25720 edbce37a989d2929e36f6a4ca1e2f1b1 311 Pfam PF03466 LysR substrate binding domain 89 291 8.1E-50 T 28-03-2018 IPR005119 LysR, substrate-binding AM393_RS07910 32c655f41e733351c3c6221cfd40bd0a 150 Pfam PF01220 Dehydroquinase class II 7 142 2.0E-60 T 28-03-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AM393_RS07910 32c655f41e733351c3c6221cfd40bd0a 150 ProSitePatterns PS01029 Dehydroquinase class II signature. 10 27 - T 28-03-2018 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AM393_RS07910 32c655f41e733351c3c6221cfd40bd0a 150 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 6 145 4.2E-61 T 28-03-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AM393_RS07910 32c655f41e733351c3c6221cfd40bd0a 150 PIRSF PIRSF001399 3 149 9.7E-60 T 28-03-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AM393_RS07910 32c655f41e733351c3c6221cfd40bd0a 150 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 7 148 4.0E-57 T 28-03-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AM393_RS07910 32c655f41e733351c3c6221cfd40bd0a 150 Gene3D G3DSA:3.40.50.9100 2 149 4.4E-66 T 28-03-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AM393_RS07910 32c655f41e733351c3c6221cfd40bd0a 150 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 150 72.873 T 28-03-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AM393_RS07910 32c655f41e733351c3c6221cfd40bd0a 150 SUPERFAMILY SSF52304 6 148 3.79E-61 T 28-03-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AM393_RS22075 65cb75e576a35073ce4a4b9974c8477a 320 Pfam PF08273 Zinc-binding domain of primase-helicase 28 63 1.7E-12 T 28-03-2018 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal GO:0003896|GO:0004386|GO:0008270 AM393_RS22075 65cb75e576a35073ce4a4b9974c8477a 320 SMART SM00778 28 63 1.8E-11 T 28-03-2018 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal GO:0003896|GO:0004386|GO:0008270 AM393_RS22075 65cb75e576a35073ce4a4b9974c8477a 320 Gene3D G3DSA:3.90.580.10 2 95 4.7E-8 T 28-03-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 AM393_RS22075 65cb75e576a35073ce4a4b9974c8477a 320 Pfam PF13362 Toprim domain 214 305 1.8E-12 T 28-03-2018 IPR006171 TOPRIM domain AM393_RS22075 65cb75e576a35073ce4a4b9974c8477a 320 SUPERFAMILY SSF57783 8 90 3.91E-5 T 28-03-2018 AM393_RS22075 65cb75e576a35073ce4a4b9974c8477a 320 Gene3D G3DSA:3.40.1360.10 198 318 3.2E-8 T 28-03-2018 AM393_RS20940 62b4af28032cf43eca5388075c9f989d 488 SMART SM00387 375 482 1.7E-23 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS20940 62b4af28032cf43eca5388075c9f989d 488 Pfam PF08918 PhoQ Sensor 10 188 1.1E-85 T 28-03-2018 IPR015014 PhoQ Sensor GO:0000160|GO:0004673|GO:0005524|GO:0016020|GO:0018106|GO:0046872 AM393_RS20940 62b4af28032cf43eca5388075c9f989d 488 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 376 475 5.6E-12 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS20940 62b4af28032cf43eca5388075c9f989d 488 SUPERFAMILY SSF55874 337 478 3.93E-29 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS20940 62b4af28032cf43eca5388075c9f989d 488 PRINTS PR00344 Bacterial sensor protein C-terminal signature 442 460 7.0E-8 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM393_RS20940 62b4af28032cf43eca5388075c9f989d 488 PRINTS PR00344 Bacterial sensor protein C-terminal signature 411 425 7.0E-8 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM393_RS20940 62b4af28032cf43eca5388075c9f989d 488 Gene3D G3DSA:3.30.565.10 336 488 3.1E-29 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS20940 62b4af28032cf43eca5388075c9f989d 488 SUPERFAMILY SSF47384 250 323 7.26E-5 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM393_RS04525 ec9149c2907965db2ef38976c5520a7e 474 Pfam PF00232 Glycosyl hydrolase family 1 3 470 1.4E-135 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AM393_RS04525 ec9149c2907965db2ef38976c5520a7e 474 SUPERFAMILY SSF51445 2 471 9.5E-162 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily AM393_RS04525 ec9149c2907965db2ef38976c5520a7e 474 Gene3D G3DSA:3.20.20.80 1 474 4.7E-155 T 28-03-2018 AM393_RS04525 ec9149c2907965db2ef38976c5520a7e 474 PRINTS PR00131 Glycosyl hydrolase family 1 signature 389 400 1.1E-15 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AM393_RS04525 ec9149c2907965db2ef38976c5520a7e 474 PRINTS PR00131 Glycosyl hydrolase family 1 signature 410 427 1.1E-15 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AM393_RS04525 ec9149c2907965db2ef38976c5520a7e 474 PRINTS PR00131 Glycosyl hydrolase family 1 signature 368 376 1.1E-15 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AM393_RS04525 ec9149c2907965db2ef38976c5520a7e 474 PRINTS PR00131 Glycosyl hydrolase family 1 signature 302 316 1.1E-15 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AM393_RS04525 ec9149c2907965db2ef38976c5520a7e 474 PRINTS PR00131 Glycosyl hydrolase family 1 signature 435 447 1.1E-15 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AM393_RS04525 ec9149c2907965db2ef38976c5520a7e 474 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 8 22 - T 28-03-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site AM393_RS04525 ec9149c2907965db2ef38976c5520a7e 474 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 368 376 - T 28-03-2018 IPR018120 Glycoside hydrolase family 1, active site AM393_RS15770 87c936528537560d2380055e9987fde1 465 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 346 454 5.4E-32 T 28-03-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AM393_RS15770 87c936528537560d2380055e9987fde1 465 Gene3D G3DSA:3.40.50.720 163 335 8.1E-34 T 28-03-2018 AM393_RS15770 87c936528537560d2380055e9987fde1 465 SUPERFAMILY SSF55424 342 464 7.9E-35 T 28-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 AM393_RS15770 87c936528537560d2380055e9987fde1 465 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 28-03-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 AM393_RS15770 87c936528537560d2380055e9987fde1 465 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 325 1.5E-72 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS15770 87c936528537560d2380055e9987fde1 465 PIRSF PIRSF000350 1 459 3.7E-79 T 28-03-2018 AM393_RS15770 87c936528537560d2380055e9987fde1 465 Gene3D G3DSA:3.50.50.60 1 162 5.6E-35 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS15770 87c936528537560d2380055e9987fde1 465 Gene3D G3DSA:3.30.390.30 344 465 3.7E-35 T 28-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 AM393_RS15770 87c936528537560d2380055e9987fde1 465 SUPERFAMILY SSF51905 2 335 8.33E-67 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS15770 87c936528537560d2380055e9987fde1 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 2.4E-65 T 28-03-2018 AM393_RS15770 87c936528537560d2380055e9987fde1 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 342 363 2.4E-65 T 28-03-2018 AM393_RS15770 87c936528537560d2380055e9987fde1 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 429 449 2.4E-65 T 28-03-2018 AM393_RS15770 87c936528537560d2380055e9987fde1 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 139 148 2.4E-65 T 28-03-2018 AM393_RS15770 87c936528537560d2380055e9987fde1 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 2.4E-65 T 28-03-2018 AM393_RS15770 87c936528537560d2380055e9987fde1 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 175 200 2.4E-65 T 28-03-2018 AM393_RS15770 87c936528537560d2380055e9987fde1 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 305 312 2.4E-65 T 28-03-2018 AM393_RS15770 87c936528537560d2380055e9987fde1 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 263 277 2.4E-65 T 28-03-2018 AM393_RS15770 87c936528537560d2380055e9987fde1 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 407 422 2.4E-65 T 28-03-2018 AM393_RS15770 87c936528537560d2380055e9987fde1 465 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 4 464 2.8E-168 T 28-03-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 AM393_RS15770 87c936528537560d2380055e9987fde1 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 175 193 2.8E-39 T 28-03-2018 AM393_RS15770 87c936528537560d2380055e9987fde1 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 278 2.8E-39 T 28-03-2018 AM393_RS15770 87c936528537560d2380055e9987fde1 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 2.8E-39 T 28-03-2018 AM393_RS15770 87c936528537560d2380055e9987fde1 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 136 154 2.8E-39 T 28-03-2018 AM393_RS15770 87c936528537560d2380055e9987fde1 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 290 312 2.8E-39 T 28-03-2018 AM393_RS21885 a9eb17dfa2f255d585f1f3567802d51a 437 SUPERFAMILY SSF56327 171 436 9.93E-81 T 28-03-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 AM393_RS21885 a9eb17dfa2f255d585f1f3567802d51a 437 Pfam PF02056 Family 4 glycosyl hydrolase 5 184 1.4E-60 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AM393_RS21885 a9eb17dfa2f255d585f1f3567802d51a 437 PRINTS PR00732 Glycosyl hydrolase family 4 signature 165 176 2.9E-42 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AM393_RS21885 a9eb17dfa2f255d585f1f3567802d51a 437 PRINTS PR00732 Glycosyl hydrolase family 4 signature 140 157 2.9E-42 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AM393_RS21885 a9eb17dfa2f255d585f1f3567802d51a 437 PRINTS PR00732 Glycosyl hydrolase family 4 signature 97 110 2.9E-42 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AM393_RS21885 a9eb17dfa2f255d585f1f3567802d51a 437 PRINTS PR00732 Glycosyl hydrolase family 4 signature 111 131 2.9E-42 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AM393_RS21885 a9eb17dfa2f255d585f1f3567802d51a 437 PRINTS PR00732 Glycosyl hydrolase family 4 signature 5 20 2.9E-42 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AM393_RS21885 a9eb17dfa2f255d585f1f3567802d51a 437 PRINTS PR00732 Glycosyl hydrolase family 4 signature 76 92 2.9E-42 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AM393_RS21885 a9eb17dfa2f255d585f1f3567802d51a 437 PRINTS PR00732 Glycosyl hydrolase family 4 signature 192 204 2.9E-42 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AM393_RS21885 a9eb17dfa2f255d585f1f3567802d51a 437 SUPERFAMILY SSF51735 4 168 1.97E-53 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS21885 a9eb17dfa2f255d585f1f3567802d51a 437 Gene3D G3DSA:3.40.50.720 2 158 2.2E-27 T 28-03-2018 AM393_RS21885 a9eb17dfa2f255d585f1f3567802d51a 437 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 196 411 2.3E-50 T 28-03-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 AM393_RS21885 a9eb17dfa2f255d585f1f3567802d51a 437 ProSitePatterns PS01324 Glycosyl hydrolases family 4 signature. 140 170 - T 28-03-2018 IPR019802 Glycoside hydrolase, family 4, conserved site GO:0004553|GO:0005975 AM393_RS21885 a9eb17dfa2f255d585f1f3567802d51a 437 Gene3D G3DSA:3.90.110.10 159 435 5.2E-85 T 28-03-2018 AM393_RS00900 102a71c1ef8018182d3599e5bee88ddf 250 SUPERFAMILY SSF52540 4 243 2.66E-78 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS00900 102a71c1ef8018182d3599e5bee88ddf 250 SMART SM00382 28 221 3.8E-21 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS00900 102a71c1ef8018182d3599e5bee88ddf 250 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS00900 102a71c1ef8018182d3599e5bee88ddf 250 Gene3D G3DSA:3.40.50.300 1 248 2.0E-78 T 28-03-2018 AM393_RS00900 102a71c1ef8018182d3599e5bee88ddf 250 PIRSF PIRSF039085 1 249 9.1E-111 T 28-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 AM393_RS00900 102a71c1ef8018182d3599e5bee88ddf 250 Pfam PF00005 ABC transporter 19 173 8.6E-36 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS07285 b4be136b8c2451b927f768a140eb0676 296 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 4 163 2.9E-51 T 28-03-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 AM393_RS07285 b4be136b8c2451b927f768a140eb0676 296 Gene3D G3DSA:3.40.50.720 3 164 4.5E-36 T 28-03-2018 AM393_RS07285 b4be136b8c2451b927f768a140eb0676 296 SUPERFAMILY SSF48179 164 293 4.76E-37 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AM393_RS07285 b4be136b8c2451b927f768a140eb0676 296 TIGRFAM TIGR01505 tartro_sem_red: 2-hydroxy-3-oxopropionate reductase 4 294 2.2E-154 T 28-03-2018 IPR006398 2-hydroxy-3-oxopropionate reductase GO:0008679|GO:0046487|GO:0055114 KEGG: 00630+1.1.1.60 AM393_RS07285 b4be136b8c2451b927f768a140eb0676 296 Hamap MF_02032 2-hydroxy-3-oxopropionate reductase [garR]. 3 296 61.699 T 28-03-2018 IPR006398 2-hydroxy-3-oxopropionate reductase GO:0008679|GO:0046487|GO:0055114 KEGG: 00630+1.1.1.60 AM393_RS07285 b4be136b8c2451b927f768a140eb0676 296 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 7 20 - T 28-03-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 AM393_RS07285 b4be136b8c2451b927f768a140eb0676 296 SUPERFAMILY SSF51735 3 164 2.25E-49 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS07285 b4be136b8c2451b927f768a140eb0676 296 Gene3D G3DSA:1.10.1040.10 165 291 8.8E-31 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AM393_RS07285 b4be136b8c2451b927f768a140eb0676 296 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 166 283 5.5E-38 T 28-03-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 AM393_RS07285 b4be136b8c2451b927f768a140eb0676 296 PIRSF PIRSF000103 1 295 1.3E-96 T 28-03-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 AM393_RS16750 7a3289b04506b5b5e136723bd212c31e 110 SUPERFAMILY SSF82607 12 104 4.19E-36 T 28-03-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family AM393_RS16750 7a3289b04506b5b5e136723bd212c31e 110 Pfam PF02575 YbaB/EbfC DNA-binding family 12 100 3.7E-35 T 28-03-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family AM393_RS16750 7a3289b04506b5b5e136723bd212c31e 110 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 6 99 23.749 T 28-03-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family AM393_RS16750 7a3289b04506b5b5e136723bd212c31e 110 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 2 106 1.1E-41 T 28-03-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family AM393_RS16750 7a3289b04506b5b5e136723bd212c31e 110 PIRSF PIRSF004555 4 110 4.3E-39 T 28-03-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family AM393_RS16750 7a3289b04506b5b5e136723bd212c31e 110 Gene3D G3DSA:3.30.1310.10 2 110 4.1E-46 T 28-03-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family AM393_RS14775 6268233894dabe103e4499fb6b01c59b 322 Gene3D G3DSA:3.40.190.10 117 203 1.5E-7 T 28-03-2018 AM393_RS14775 6268233894dabe103e4499fb6b01c59b 322 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 32 90 3.6E-18 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS14775 6268233894dabe103e4499fb6b01c59b 322 SUPERFAMILY SSF46785 27 106 1.36E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS14775 6268233894dabe103e4499fb6b01c59b 322 Gene3D G3DSA:3.40.190.10 204 292 1.4E-9 T 28-03-2018 AM393_RS14775 6268233894dabe103e4499fb6b01c59b 322 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 1.1E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS14775 6268233894dabe103e4499fb6b01c59b 322 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 58 68 1.1E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS14775 6268233894dabe103e4499fb6b01c59b 322 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 68 79 1.1E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS14775 6268233894dabe103e4499fb6b01c59b 322 SUPERFAMILY SSF53850 113 319 5.07E-40 T 28-03-2018 AM393_RS14775 6268233894dabe103e4499fb6b01c59b 322 Gene3D G3DSA:1.10.10.10 26 107 2.9E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS14775 6268233894dabe103e4499fb6b01c59b 322 Pfam PF03466 LysR substrate binding domain 145 318 1.3E-16 T 28-03-2018 IPR005119 LysR, substrate-binding AM393_RS22700 8315c0261c1f95087b296ad0dccc9826 401 ProSitePatterns PS00099 Thiolases active site. 382 395 - T 28-03-2018 IPR020610 Thiolase, active site GO:0008152|GO:0016747 AM393_RS22700 8315c0261c1f95087b296ad0dccc9826 401 Gene3D G3DSA:3.40.47.10 272 398 1.4E-33 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM393_RS22700 8315c0261c1f95087b296ad0dccc9826 401 Gene3D G3DSA:3.40.47.10 159 271 8.6E-23 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM393_RS22700 8315c0261c1f95087b296ad0dccc9826 401 Gene3D G3DSA:3.40.47.10 1 147 1.9E-32 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM393_RS22700 8315c0261c1f95087b296ad0dccc9826 401 ProSitePatterns PS00737 Thiolases signature 2. 347 363 - T 28-03-2018 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 AM393_RS22700 8315c0261c1f95087b296ad0dccc9826 401 SUPERFAMILY SSF53901 3 272 3.55E-80 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM393_RS22700 8315c0261c1f95087b296ad0dccc9826 401 SUPERFAMILY SSF53901 277 400 2.31E-45 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM393_RS22700 8315c0261c1f95087b296ad0dccc9826 401 PIRSF PIRSF000429 1 401 9.0E-136 T 28-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 AM393_RS22700 8315c0261c1f95087b296ad0dccc9826 401 Pfam PF02803 Thiolase, C-terminal domain 277 400 3.0E-46 T 28-03-2018 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 AM393_RS22700 8315c0261c1f95087b296ad0dccc9826 401 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 86 104 - T 28-03-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 AM393_RS22700 8315c0261c1f95087b296ad0dccc9826 401 Pfam PF00108 Thiolase, N-terminal domain 5 269 3.2E-74 T 28-03-2018 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 AM393_RS22700 8315c0261c1f95087b296ad0dccc9826 401 TIGRFAM TIGR02430 pcaF: 3-oxoadipyl-CoA thiolase 2 401 3.8E-218 T 28-03-2018 IPR012793 Beta-ketoadipyl CoA thiolase GO:0016747|GO:0019619 KEGG: 00250+2.3.1.17|KEGG: 00360+2.3.1.174|KEGG: 00362+2.3.1.174|MetaCyc: PWY-1361|MetaCyc: PWY-2361|MetaCyc: PWY-6185 AM393_RS22700 8315c0261c1f95087b296ad0dccc9826 401 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 399 2.3E-138 T 28-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 AM393_RS23250 c67924773b8cddb707e8d62ab0064ba2 236 ProDom PD120112 LIPOPROTEIN YNFC MEMBRANE UPF0257 PRECURSOR PALMITATE SIGNAL INNER 1 236 2.0E-84 T 28-03-2018 IPR010646 Uncharacterised protein family UPF0257 GO:0005886 AM393_RS23250 c67924773b8cddb707e8d62ab0064ba2 236 Hamap MF_01065 UPF0257 lipoprotein YnfC [ynfC]. 2 236 40.869 T 28-03-2018 IPR010646 Uncharacterised protein family UPF0257 GO:0005886 AM393_RS23250 c67924773b8cddb707e8d62ab0064ba2 236 Pfam PF06788 Uncharacterised protein family (UPF0257) 6 236 1.4E-120 T 28-03-2018 IPR010646 Uncharacterised protein family UPF0257 GO:0005886 AM393_RS09810 b7f2f00e4a9e02c2da95c089aca46c8f 693 Gene3D G3DSA:3.40.50.300 251 456 3.4E-35 T 28-03-2018 AM393_RS09810 b7f2f00e4a9e02c2da95c089aca46c8f 693 Gene3D G3DSA:2.40.50.140 53 142 2.0E-12 T 28-03-2018 AM393_RS09810 b7f2f00e4a9e02c2da95c089aca46c8f 693 Pfam PF00271 Helicase conserved C-terminal domain 480 588 1.1E-16 T 28-03-2018 IPR001650 Helicase, C-terminal AM393_RS09810 b7f2f00e4a9e02c2da95c089aca46c8f 693 Pfam PF17191 RecG wedge domain 14 171 1.1E-22 T 28-03-2018 IPR033454 RecG, wedge domain AM393_RS09810 b7f2f00e4a9e02c2da95c089aca46c8f 693 SUPERFAMILY SSF52540 209 453 3.31E-59 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS09810 b7f2f00e4a9e02c2da95c089aca46c8f 693 SUPERFAMILY SSF52540 508 653 2.43E-44 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS09810 b7f2f00e4a9e02c2da95c089aca46c8f 693 SUPERFAMILY SSF52540 292 342 2.43E-44 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS09810 b7f2f00e4a9e02c2da95c089aca46c8f 693 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 28 664 1.4E-248 T 28-03-2018 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 AM393_RS09810 b7f2f00e4a9e02c2da95c089aca46c8f 693 SMART SM00490 505 589 8.7E-20 T 28-03-2018 IPR001650 Helicase, C-terminal AM393_RS09810 b7f2f00e4a9e02c2da95c089aca46c8f 693 SMART SM00487 265 459 1.3E-30 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AM393_RS09810 b7f2f00e4a9e02c2da95c089aca46c8f 693 Pfam PF00270 DEAD/DEAH box helicase 293 433 2.3E-19 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AM393_RS09810 b7f2f00e4a9e02c2da95c089aca46c8f 693 Gene3D G3DSA:1.10.150.20 2 52 3.3E-4 T 28-03-2018 AM393_RS09810 b7f2f00e4a9e02c2da95c089aca46c8f 693 SUPERFAMILY SSF50249 9 175 7.2E-44 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM393_RS09810 b7f2f00e4a9e02c2da95c089aca46c8f 693 Gene3D G3DSA:3.40.50.300 457 630 6.7E-26 T 28-03-2018 AM393_RS07330 331b92f1e34397c63b978b77ce6f4861 271 SUPERFAMILY SSF55804 3 139 8.76E-36 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 AM393_RS07330 331b92f1e34397c63b978b77ce6f4861 271 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 159 240 9.6E-20 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like AM393_RS07330 331b92f1e34397c63b978b77ce6f4861 271 SUPERFAMILY SSF55594 160 246 6.41E-23 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like AM393_RS07330 331b92f1e34397c63b978b77ce6f4861 271 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 169 176 - T 28-03-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site AM393_RS07330 331b92f1e34397c63b978b77ce6f4861 271 PRINTS PR00107 Phosphocarrier protein signature 212 229 9.7E-12 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like AM393_RS07330 331b92f1e34397c63b978b77ce6f4861 271 PRINTS PR00107 Phosphocarrier protein signature 197 212 9.7E-12 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like AM393_RS07330 331b92f1e34397c63b978b77ce6f4861 271 PRINTS PR00107 Phosphocarrier protein signature 169 185 9.7E-12 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like AM393_RS07330 331b92f1e34397c63b978b77ce6f4861 271 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 46 62 - T 28-03-2018 IPR002178 PTS EIIA type-2 domain AM393_RS07330 331b92f1e34397c63b978b77ce6f4861 271 Gene3D G3DSA:3.30.1340.10 156 241 7.0E-24 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like AM393_RS07330 331b92f1e34397c63b978b77ce6f4861 271 Gene3D G3DSA:3.40.930.10 1 141 4.8E-30 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 AM393_RS07330 331b92f1e34397c63b978b77ce6f4861 271 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 4 139 1.4E-28 T 28-03-2018 IPR002178 PTS EIIA type-2 domain AM393_RS07330 331b92f1e34397c63b978b77ce6f4861 271 Pfam PF00381 PTS HPr component phosphorylation site 159 240 4.7E-23 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like AM393_RS06185 5cb46f267c5342c4bbda56be7ce17f1d 217 Gene3D G3DSA:1.10.10.10 120 215 6.4E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS06185 5cb46f267c5342c4bbda56be7ce17f1d 217 SUPERFAMILY SSF46894 146 214 4.42E-20 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM393_RS06185 5cb46f267c5342c4bbda56be7ce17f1d 217 Pfam PF00196 Bacterial regulatory proteins, luxR family 156 211 4.1E-20 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS06185 5cb46f267c5342c4bbda56be7ce17f1d 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 171 187 4.2E-12 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS06185 5cb46f267c5342c4bbda56be7ce17f1d 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 157 171 4.2E-12 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS06185 5cb46f267c5342c4bbda56be7ce17f1d 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 187 199 4.2E-12 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS06185 5cb46f267c5342c4bbda56be7ce17f1d 217 SMART SM00421 154 211 2.8E-25 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS06185 5cb46f267c5342c4bbda56be7ce17f1d 217 ProSitePatterns PS00622 LuxR-type HTH domain signature. 171 198 - T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS16685 5963f9ec7cf9556bde3fb334dd0c242d 188 SUPERFAMILY SSF51161 2 183 2.08E-54 T 28-03-2018 IPR011004 Trimeric LpxA-like AM393_RS16685 5963f9ec7cf9556bde3fb334dd0c242d 188 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 92 109 0.0038 T 28-03-2018 IPR001451 Hexapeptide repeat AM393_RS16685 5963f9ec7cf9556bde3fb334dd0c242d 188 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 129 164 4.3E-11 T 28-03-2018 IPR001451 Hexapeptide repeat AM393_RS16685 5963f9ec7cf9556bde3fb334dd0c242d 188 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 138 166 - T 28-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AM393_RS16685 5963f9ec7cf9556bde3fb334dd0c242d 188 Gene3D G3DSA:2.160.10.10 2 188 6.0E-53 T 28-03-2018 AM393_RS16685 5963f9ec7cf9556bde3fb334dd0c242d 188 SMART SM01266 5 59 3.0E-23 T 28-03-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 AM393_RS16685 5963f9ec7cf9556bde3fb334dd0c242d 188 Pfam PF12464 Maltose acetyltransferase 7 58 4.1E-19 T 28-03-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 AM393_RS14310 982fa593adf3154b9d416a720b73604b 474 Pfam PF14827 Double sensory domain of two-component sensor kinase 55 168 3.3E-6 T 28-03-2018 IPR029150 Double Cache domain 3 AM393_RS14310 982fa593adf3154b9d416a720b73604b 474 Gene3D G3DSA:1.10.287.130 235 314 2.9E-9 T 28-03-2018 AM393_RS14310 982fa593adf3154b9d416a720b73604b 474 SUPERFAMILY SSF47384 240 319 2.35E-13 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM393_RS14310 982fa593adf3154b9d416a720b73604b 474 Pfam PF00512 His Kinase A (phospho-acceptor) domain 260 319 4.0E-12 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM393_RS14310 982fa593adf3154b9d416a720b73604b 474 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 363 470 9.7E-22 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS14310 982fa593adf3154b9d416a720b73604b 474 SUPERFAMILY SSF55874 311 469 2.75E-36 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS14310 982fa593adf3154b9d416a720b73604b 474 PRINTS PR00344 Bacterial sensor protein C-terminal signature 400 414 1.1E-7 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM393_RS14310 982fa593adf3154b9d416a720b73604b 474 PRINTS PR00344 Bacterial sensor protein C-terminal signature 433 451 1.1E-7 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM393_RS14310 982fa593adf3154b9d416a720b73604b 474 PRINTS PR00344 Bacterial sensor protein C-terminal signature 418 428 1.1E-7 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM393_RS14310 982fa593adf3154b9d416a720b73604b 474 SMART SM00388 255 320 2.9E-15 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM393_RS14310 982fa593adf3154b9d416a720b73604b 474 Gene3D G3DSA:3.30.450.20 28 175 2.3E-26 T 28-03-2018 AM393_RS14310 982fa593adf3154b9d416a720b73604b 474 Gene3D G3DSA:3.30.565.10 315 471 4.7E-36 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS14310 982fa593adf3154b9d416a720b73604b 474 SMART SM00387 363 473 1.3E-31 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS14310 982fa593adf3154b9d416a720b73604b 474 SUPERFAMILY SSF103190 51 172 2.39E-13 T 28-03-2018 IPR029151 Periplasmic sensor domain-like AM393_RS21965 92992a4a51d35f8607d638e4c5871a65 304 Pfam PF03466 LysR substrate binding domain 85 290 1.2E-38 T 28-03-2018 IPR005119 LysR, substrate-binding AM393_RS21965 92992a4a51d35f8607d638e4c5871a65 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 2.2E-18 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS21965 92992a4a51d35f8607d638e4c5871a65 304 SUPERFAMILY SSF53850 87 295 7.06E-41 T 28-03-2018 AM393_RS21965 92992a4a51d35f8607d638e4c5871a65 304 Gene3D G3DSA:1.10.10.10 3 84 1.2E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS21965 92992a4a51d35f8607d638e4c5871a65 304 SUPERFAMILY SSF46785 3 109 1.25E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS21965 92992a4a51d35f8607d638e4c5871a65 304 Gene3D G3DSA:3.40.190.10 89 174 2.0E-15 T 28-03-2018 AM393_RS21965 92992a4a51d35f8607d638e4c5871a65 304 Gene3D G3DSA:3.40.190.10 175 262 4.8E-19 T 28-03-2018 AM393_RS27790 5869867491e4be3ebf7f85c02b014859 294 SUPERFAMILY SSF103481 47 137 1.83E-11 T 28-03-2018 AM393_RS27790 5869867491e4be3ebf7f85c02b014859 294 Pfam PF00892 EamA-like transporter family 9 134 5.0E-15 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM393_RS27790 5869867491e4be3ebf7f85c02b014859 294 Pfam PF00892 EamA-like transporter family 145 276 1.5E-21 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM393_RS27790 5869867491e4be3ebf7f85c02b014859 294 SUPERFAMILY SSF103481 178 281 5.23E-18 T 28-03-2018 AM393_RS12305 335aeb276679241285f84b516c99c031 550 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 451 471 - T 28-03-2018 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 AM393_RS12305 335aeb276679241285f84b516c99c031 550 Hamap MF_01426 Cation/acetate symporter ActP [actP]. 1 550 56.656 T 28-03-2018 IPR014083 Cation/acetate symporter ActP GO:0005887|GO:0015123|GO:0043879 AM393_RS12305 335aeb276679241285f84b516c99c031 550 Pfam PF00474 Sodium:solute symporter family 64 469 3.4E-135 T 28-03-2018 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 AM393_RS12305 335aeb276679241285f84b516c99c031 550 TIGRFAM TIGR02711 symport_actP: cation/acetate symporter ActP 5 550 0.0 T 28-03-2018 IPR014083 Cation/acetate symporter ActP GO:0005887|GO:0015123|GO:0043879 AM393_RS12305 335aeb276679241285f84b516c99c031 550 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 64 468 9.8E-64 T 28-03-2018 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 AM393_RS12305 335aeb276679241285f84b516c99c031 550 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 179 204 - T 28-03-2018 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 AM393_RS23950 09d5471b60b37fa20fb91a4c172db89d 266 Gene3D G3DSA:1.10.10.10 3 57 2.6E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS23950 09d5471b60b37fa20fb91a4c172db89d 266 SUPERFAMILY SSF46785 5 59 2.05E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS23950 09d5471b60b37fa20fb91a4c172db89d 266 SUPERFAMILY SSF100950 89 246 3.77E-23 T 28-03-2018 AM393_RS23950 09d5471b60b37fa20fb91a4c172db89d 266 Gene3D G3DSA:3.40.50.1360 79 266 9.7E-30 T 28-03-2018 AM393_RS23950 09d5471b60b37fa20fb91a4c172db89d 266 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 1.1E-10 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM393_RS23950 09d5471b60b37fa20fb91a4c172db89d 266 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 1.1E-10 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM393_RS23950 09d5471b60b37fa20fb91a4c172db89d 266 SMART SM01134 87 247 1.3E-51 T 28-03-2018 AM393_RS23950 09d5471b60b37fa20fb91a4c172db89d 266 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 28-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 AM393_RS23950 09d5471b60b37fa20fb91a4c172db89d 266 Pfam PF08220 DeoR-like helix-turn-helix domain 6 59 7.3E-18 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM393_RS23950 09d5471b60b37fa20fb91a4c172db89d 266 SMART SM00420 6 58 1.8E-18 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM393_RS23950 09d5471b60b37fa20fb91a4c172db89d 266 Pfam PF00455 DeoR C terminal sensor domain 89 245 2.8E-40 T 28-03-2018 IPR014036 DeoR C-terminal sensor domain AM393_RS17735 a4f77aeedefa0f4e893f4017b327fd3d 194 SUPERFAMILY SSF46689 3 76 6.48E-16 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS17735 a4f77aeedefa0f4e893f4017b327fd3d 194 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 1.5E-9 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM393_RS17735 a4f77aeedefa0f4e893f4017b327fd3d 194 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 1.5E-9 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM393_RS17735 a4f77aeedefa0f4e893f4017b327fd3d 194 ProSitePatterns PS01081 TetR-type HTH domain signature. 25 55 - T 28-03-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AM393_RS17735 a4f77aeedefa0f4e893f4017b327fd3d 194 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 58 8.0E-14 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM393_RS17735 a4f77aeedefa0f4e893f4017b327fd3d 194 Gene3D G3DSA:1.10.357.10 1 193 9.8E-31 T 28-03-2018 AM393_RS22880 3fa43b1bac9f1f1612ffbb225189439b 519 Pfam PF06097 Bacterial protein of unknown function (DUF945) 1 480 2.2E-134 T 28-03-2018 IPR010352 Protein of unknown function DUF945 AM393_RS23925 66c97bf21ce89d725d010452cb3a0669 518 Pfam PF00501 AMP-binding enzyme 17 411 1.2E-79 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AM393_RS23925 66c97bf21ce89d725d010452cb3a0669 518 ProSitePatterns PS00455 Putative AMP-binding domain signature. 159 170 - T 28-03-2018 IPR020845 AMP-binding, conserved site AM393_RS23925 66c97bf21ce89d725d010452cb3a0669 518 Gene3D G3DSA:3.40.50.980 7 164 2.5E-33 T 28-03-2018 AM393_RS23925 66c97bf21ce89d725d010452cb3a0669 518 Pfam PF13193 AMP-binding enzyme C-terminal domain 420 495 1.5E-16 T 28-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain AM393_RS23925 66c97bf21ce89d725d010452cb3a0669 518 Gene3D G3DSA:3.30.300.30 405 510 3.5E-25 T 28-03-2018 AM393_RS23925 66c97bf21ce89d725d010452cb3a0669 518 SUPERFAMILY SSF56801 7 508 7.59E-127 T 28-03-2018 AM393_RS23925 66c97bf21ce89d725d010452cb3a0669 518 Gene3D G3DSA:3.40.50.980 165 322 2.6E-38 T 28-03-2018 AM393_RS23925 66c97bf21ce89d725d010452cb3a0669 518 Gene3D G3DSA:2.30.38.10 323 404 8.1E-20 T 28-03-2018 AM393_RS10870 c59a1d7741f002020b3f0c51c2544f29 382 SUPERFAMILY SSF56796 3 380 1.03E-124 T 28-03-2018 AM393_RS10870 c59a1d7741f002020b3f0c51c2544f29 382 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 259 279 - T 28-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 AM393_RS10870 c59a1d7741f002020b3f0c51c2544f29 382 Pfam PF00465 Iron-containing alcohol dehydrogenase 9 374 1.3E-121 T 28-03-2018 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 AM393_RS10870 c59a1d7741f002020b3f0c51c2544f29 382 Gene3D G3DSA:3.40.50.1970 8 182 7.5E-42 T 28-03-2018 AM393_RS10870 c59a1d7741f002020b3f0c51c2544f29 382 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 172 200 - T 28-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 AM393_RS10870 c59a1d7741f002020b3f0c51c2544f29 382 Gene3D G3DSA:1.20.1090.10 183 382 6.4E-67 T 28-03-2018 AM393_RS10870 c59a1d7741f002020b3f0c51c2544f29 382 TIGRFAM TIGR02638 lactal_redase: lactaldehyde reductase 2 378 1.5E-179 T 28-03-2018 IPR013460 Lactaldehyde reductase KEGG: 00630+1.1.1.77|KEGG: 00640+1.1.1.77 AM393_RS19195 0995ccc465316d62febb24009d9a686b 304 Gene3D G3DSA:3.40.50.150 38 296 2.1E-54 T 28-03-2018 AM393_RS19195 0995ccc465316d62febb24009d9a686b 304 SUPERFAMILY SSF53335 44 295 4.4E-30 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM393_RS19195 0995ccc465316d62febb24009d9a686b 304 Hamap MF_01848 Ribosomal RNA large subunit methyltransferase F [rlmF]. 5 298 53.692 T 28-03-2018 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 AM393_RS19195 0995ccc465316d62febb24009d9a686b 304 PIRSF PIRSF029038 1 304 7.3E-144 T 28-03-2018 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 AM393_RS19195 0995ccc465316d62febb24009d9a686b 304 Pfam PF05971 Protein of unknown function (DUF890) 3 296 1.1E-142 T 28-03-2018 IPR010286 Ribosomal RNA large subunit methyltransferase F-like GO:0008168 AM393_RS16400 6ff52590f595803417cda8e161725ce0 558 SUPERFAMILY SSF56425 337 493 1.33E-30 T 28-03-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM393_RS16400 6ff52590f595803417cda8e161725ce0 558 SUPERFAMILY SSF51905 1 279 3.03E-34 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS16400 6ff52590f595803417cda8e161725ce0 558 SUPERFAMILY SSF51905 491 531 3.03E-34 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS16400 6ff52590f595803417cda8e161725ce0 558 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 9.0E-7 T 28-03-2018 AM393_RS16400 6ff52590f595803417cda8e161725ce0 558 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 513 528 9.0E-7 T 28-03-2018 AM393_RS16400 6ff52590f595803417cda8e161725ce0 558 Pfam PF00890 FAD binding domain 5 538 8.4E-90 T 28-03-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM393_RS16400 6ff52590f595803417cda8e161725ce0 558 Gene3D G3DSA:3.50.50.60 2 382 2.5E-40 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS16400 6ff52590f595803417cda8e161725ce0 558 Gene3D G3DSA:3.50.50.60 383 554 3.0E-13 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS23830 c3a9186f86415c429413653eb0a90df8 311 Pfam PF00756 Putative esterase 64 301 4.2E-12 T 28-03-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 AM393_RS23830 c3a9186f86415c429413653eb0a90df8 311 SUPERFAMILY SSF53474 42 303 2.65E-53 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AM393_RS23830 c3a9186f86415c429413653eb0a90df8 311 Gene3D G3DSA:3.40.50.1820 41 311 4.7E-25 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AM393_RS18805 497a57ca49008bcd3ea1940ed65ced52 314 Gene3D G3DSA:3.30.70.1350 215 293 4.9E-10 T 28-03-2018 IPR027470 Cation efflux protein, cytoplasmic domain AM393_RS18805 497a57ca49008bcd3ea1940ed65ced52 314 SUPERFAMILY SSF160240 228 292 2.09E-8 T 28-03-2018 AM393_RS18805 497a57ca49008bcd3ea1940ed65ced52 314 Gene3D G3DSA:1.20.1510.10 17 213 2.0E-61 T 28-03-2018 AM393_RS18805 497a57ca49008bcd3ea1940ed65ced52 314 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 18 293 5.7E-94 T 28-03-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AM393_RS18805 497a57ca49008bcd3ea1940ed65ced52 314 Pfam PF01545 Cation efflux family 22 213 8.2E-51 T 28-03-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AM393_RS18805 497a57ca49008bcd3ea1940ed65ced52 314 SUPERFAMILY SSF161111 15 214 1.7E-60 T 28-03-2018 AM393_RS11545 d798b7896df2906ee82e0ed02e2f72a8 259 Pfam PF00902 Sec-independent protein translocase protein (TatC) 12 221 9.5E-66 T 28-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AM393_RS11545 d798b7896df2906ee82e0ed02e2f72a8 259 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 9 226 2.3E-78 T 28-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AM393_RS11545 d798b7896df2906ee82e0ed02e2f72a8 259 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 3 240 18.202 T 28-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AM393_RS11545 d798b7896df2906ee82e0ed02e2f72a8 259 ProSitePatterns PS01218 TatC family signature. 154 173 - T 28-03-2018 IPR019820 Sec-independent periplasmic protein translocase, conserved site AM393_RS11545 d798b7896df2906ee82e0ed02e2f72a8 259 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 8 35 3.5E-51 T 28-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AM393_RS11545 d798b7896df2906ee82e0ed02e2f72a8 259 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 154 182 3.5E-51 T 28-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AM393_RS11545 d798b7896df2906ee82e0ed02e2f72a8 259 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 103 129 3.5E-51 T 28-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AM393_RS11545 d798b7896df2906ee82e0ed02e2f72a8 259 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 85 103 3.5E-51 T 28-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AM393_RS27335 45e493903bb08e128894c2b4fb60e9c4 103 Pfam PF00563 EAL domain 5 88 1.5E-28 T 28-03-2018 IPR001633 EAL domain AM393_RS27335 45e493903bb08e128894c2b4fb60e9c4 103 SMART SM00052 1 93 3.3E-4 T 28-03-2018 IPR001633 EAL domain AM393_RS27335 45e493903bb08e128894c2b4fb60e9c4 103 Gene3D G3DSA:3.20.20.450 1 103 2.1E-36 T 28-03-2018 IPR001633 EAL domain AM393_RS27335 45e493903bb08e128894c2b4fb60e9c4 103 SUPERFAMILY SSF141868 5 100 1.19E-35 T 28-03-2018 IPR001633 EAL domain AM393_RS28535 46c8e5a4fc79ab5e6a3390dc0f3bc0e6 223 SUPERFAMILY SSF143081 2 222 3.27E-58 T 28-03-2018 IPR003738 SOS response associated peptidase (SRAP) AM393_RS28535 46c8e5a4fc79ab5e6a3390dc0f3bc0e6 223 Pfam PF02586 SOS response associated peptidase (SRAP) 1 211 8.7E-47 T 28-03-2018 IPR003738 SOS response associated peptidase (SRAP) AM393_RS28535 46c8e5a4fc79ab5e6a3390dc0f3bc0e6 223 Gene3D G3DSA:3.90.1680.10 1 222 3.3E-62 T 28-03-2018 IPR003738 SOS response associated peptidase (SRAP) AM393_RS19985 877f283f333ac306b47819898d0b461c 557 PIRSF PIRSF002111 1 534 4.7E-220 T 28-03-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 AM393_RS19985 877f283f333ac306b47819898d0b461c 557 Gene3D G3DSA:2.40.50.140 105 178 2.7E-7 T 28-03-2018 AM393_RS19985 877f283f333ac306b47819898d0b461c 557 SUPERFAMILY SSF50249 429 536 1.64E-22 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM393_RS19985 877f283f333ac306b47819898d0b461c 557 SUPERFAMILY SSF50249 1 112 9.43E-19 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM393_RS19985 877f283f333ac306b47819898d0b461c 557 Gene3D G3DSA:2.40.50.140 1 92 8.2E-8 T 28-03-2018 AM393_RS19985 877f283f333ac306b47819898d0b461c 557 PRINTS PR00681 Ribosomal protein S1 signature 155 175 2.3E-99 T 28-03-2018 AM393_RS19985 877f283f333ac306b47819898d0b461c 557 PRINTS PR00681 Ribosomal protein S1 signature 330 348 2.3E-99 T 28-03-2018 AM393_RS19985 877f283f333ac306b47819898d0b461c 557 PRINTS PR00681 Ribosomal protein S1 signature 21 39 2.3E-99 T 28-03-2018 AM393_RS19985 877f283f333ac306b47819898d0b461c 557 PRINTS PR00681 Ribosomal protein S1 signature 126 143 2.3E-99 T 28-03-2018 AM393_RS19985 877f283f333ac306b47819898d0b461c 557 PRINTS PR00681 Ribosomal protein S1 signature 212 233 2.3E-99 T 28-03-2018 AM393_RS19985 877f283f333ac306b47819898d0b461c 557 PRINTS PR00681 Ribosomal protein S1 signature 290 309 2.3E-99 T 28-03-2018 AM393_RS19985 877f283f333ac306b47819898d0b461c 557 PRINTS PR00681 Ribosomal protein S1 signature 39 53 2.3E-99 T 28-03-2018 AM393_RS19985 877f283f333ac306b47819898d0b461c 557 PRINTS PR00681 Ribosomal protein S1 signature 108 124 2.3E-99 T 28-03-2018 AM393_RS19985 877f283f333ac306b47819898d0b461c 557 PRINTS PR00681 Ribosomal protein S1 signature 84 103 2.3E-99 T 28-03-2018 AM393_RS19985 877f283f333ac306b47819898d0b461c 557 Gene3D G3DSA:2.40.50.140 451 550 4.6E-19 T 28-03-2018 AM393_RS19985 877f283f333ac306b47819898d0b461c 557 SMART SM00316 19 87 6.8E-5 T 28-03-2018 IPR022967 RNA-binding domain, S1 AM393_RS19985 877f283f333ac306b47819898d0b461c 557 SMART SM00316 190 260 2.8E-28 T 28-03-2018 IPR022967 RNA-binding domain, S1 AM393_RS19985 877f283f333ac306b47819898d0b461c 557 SMART SM00316 449 520 4.1E-21 T 28-03-2018 IPR022967 RNA-binding domain, S1 AM393_RS19985 877f283f333ac306b47819898d0b461c 557 SMART SM00316 275 347 2.2E-27 T 28-03-2018 IPR022967 RNA-binding domain, S1 AM393_RS19985 877f283f333ac306b47819898d0b461c 557 SMART SM00316 362 434 3.4E-21 T 28-03-2018 IPR022967 RNA-binding domain, S1 AM393_RS19985 877f283f333ac306b47819898d0b461c 557 SMART SM00316 103 171 2.0E-8 T 28-03-2018 IPR022967 RNA-binding domain, S1 AM393_RS19985 877f283f333ac306b47819898d0b461c 557 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 3 520 5.0E-240 T 28-03-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 AM393_RS19985 877f283f333ac306b47819898d0b461c 557 Gene3D G3DSA:2.40.50.140 274 348 2.5E-27 T 28-03-2018 AM393_RS19985 877f283f333ac306b47819898d0b461c 557 Gene3D G3DSA:2.40.50.140 361 435 2.3E-20 T 28-03-2018 AM393_RS19985 877f283f333ac306b47819898d0b461c 557 SUPERFAMILY SSF50249 189 277 3.88E-27 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM393_RS19985 877f283f333ac306b47819898d0b461c 557 SUPERFAMILY SSF50249 255 370 1.12E-30 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM393_RS19985 877f283f333ac306b47819898d0b461c 557 Gene3D G3DSA:2.40.50.140 182 266 2.5E-26 T 28-03-2018 AM393_RS19985 877f283f333ac306b47819898d0b461c 557 Pfam PF00575 S1 RNA binding domain 104 171 8.3E-10 T 28-03-2018 IPR003029 S1 domain GO:0003676 AM393_RS19985 877f283f333ac306b47819898d0b461c 557 Pfam PF00575 S1 RNA binding domain 275 347 2.7E-20 T 28-03-2018 IPR003029 S1 domain GO:0003676 AM393_RS19985 877f283f333ac306b47819898d0b461c 557 Pfam PF00575 S1 RNA binding domain 190 260 2.4E-21 T 28-03-2018 IPR003029 S1 domain GO:0003676 AM393_RS19985 877f283f333ac306b47819898d0b461c 557 Pfam PF00575 S1 RNA binding domain 449 520 8.6E-16 T 28-03-2018 IPR003029 S1 domain GO:0003676 AM393_RS19985 877f283f333ac306b47819898d0b461c 557 Pfam PF00575 S1 RNA binding domain 361 434 9.5E-22 T 28-03-2018 IPR003029 S1 domain GO:0003676 AM393_RS19985 877f283f333ac306b47819898d0b461c 557 Pfam PF00575 S1 RNA binding domain 20 78 7.8E-7 T 28-03-2018 IPR003029 S1 domain GO:0003676 AM393_RS19985 877f283f333ac306b47819898d0b461c 557 SUPERFAMILY SSF50249 106 185 3.28E-14 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM393_RS19985 877f283f333ac306b47819898d0b461c 557 SUPERFAMILY SSF50249 362 443 1.63E-20 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM393_RS01775 db76d80ef76c8dbb48fcde5aae88e75e 465 Gene3D G3DSA:3.40.50.720 141 264 3.6E-10 T 28-03-2018 AM393_RS01775 db76d80ef76c8dbb48fcde5aae88e75e 465 Pfam PF13727 CoA-binding domain 65 239 1.5E-31 T 28-03-2018 AM393_RS01775 db76d80ef76c8dbb48fcde5aae88e75e 465 Pfam PF02397 Bacterial sugar transferase 275 457 1.8E-65 T 28-03-2018 IPR003362 Bacterial sugar transferase AM393_RS01775 db76d80ef76c8dbb48fcde5aae88e75e 465 TIGRFAM TIGR03023 WcaJ_sugtrans: undecaprenyl-phosphate glucose phosphotransferase 25 465 1.8E-162 T 28-03-2018 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ MetaCyc: PWY-6655|MetaCyc: PWY-6658 AM393_RS01775 db76d80ef76c8dbb48fcde5aae88e75e 465 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 25 465 3.8E-141 T 28-03-2018 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase AM393_RS21975 2c67f530df22c470e04bbacee4a736ea 510 SMART SM00471 53 242 9.0E-14 T 28-03-2018 IPR003607 HD/PDEase domain AM393_RS21975 2c67f530df22c470e04bbacee4a736ea 510 Pfam PF01966 HD domain 57 233 4.8E-9 T 28-03-2018 IPR006674 HD domain AM393_RS21975 2c67f530df22c470e04bbacee4a736ea 510 SUPERFAMILY SSF109604 10 128 7.92E-70 T 28-03-2018 AM393_RS21975 2c67f530df22c470e04bbacee4a736ea 510 SUPERFAMILY SSF109604 155 490 7.92E-70 T 28-03-2018 AM393_RS21975 2c67f530df22c470e04bbacee4a736ea 510 Gene3D G3DSA:1.10.3210.10 7 345 1.3E-63 T 28-03-2018 AM393_RS21330 2ae7d840e595a7b60072b06374aee0c9 339 Pfam PF00710 Asparaginase, N-terminal 6 187 7.2E-65 T 28-03-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 AM393_RS21330 2ae7d840e595a7b60072b06374aee0c9 339 Gene3D G3DSA:3.40.50.1170 1 208 4.6E-80 T 28-03-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 AM393_RS21330 2ae7d840e595a7b60072b06374aee0c9 339 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 84 94 - T 28-03-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 AM393_RS21330 2ae7d840e595a7b60072b06374aee0c9 339 PIRSF PIRSF001220 1 334 6.5E-95 T 28-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AM393_RS21330 2ae7d840e595a7b60072b06374aee0c9 339 Gene3D G3DSA:3.40.50.40 210 337 5.6E-42 T 28-03-2018 IPR027473 L-asparaginase, C-terminal domain Reactome: R-HSA-70614 AM393_RS21330 2ae7d840e595a7b60072b06374aee0c9 339 SMART SM00870 5 323 8.4E-140 T 28-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AM393_RS21330 2ae7d840e595a7b60072b06374aee0c9 339 TIGRFAM TIGR00519 asnASE_I: L-asparaginase, type I 3 335 3.0E-134 T 28-03-2018 IPR006033 L-asparaginase, type I GO:0004067|GO:0006520 Reactome: R-HSA-70614 AM393_RS21330 2ae7d840e595a7b60072b06374aee0c9 339 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 8 16 - T 28-03-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 AM393_RS21330 2ae7d840e595a7b60072b06374aee0c9 339 PIRSF PIRSF500176 2 332 1.3E-115 T 28-03-2018 AM393_RS21330 2ae7d840e595a7b60072b06374aee0c9 339 SUPERFAMILY SSF53774 3 335 2.49E-112 T 28-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AM393_RS21330 2ae7d840e595a7b60072b06374aee0c9 339 PRINTS PR00139 Asparaginase/glutaminase family signature 260 278 7.7E-17 T 28-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AM393_RS21330 2ae7d840e595a7b60072b06374aee0c9 339 PRINTS PR00139 Asparaginase/glutaminase family signature 83 101 7.7E-17 T 28-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AM393_RS21330 2ae7d840e595a7b60072b06374aee0c9 339 PRINTS PR00139 Asparaginase/glutaminase family signature 6 17 7.7E-17 T 28-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AM393_RS12500 cf3780947b463dc2e97ad474f99e593e 305 Gene3D G3DSA:1.10.287.110 1 113 1.5E-31 T 28-03-2018 IPR001623 DnaJ domain AM393_RS12500 cf3780947b463dc2e97ad474f99e593e 305 SUPERFAMILY SSF49493 114 207 4.84E-15 T 28-03-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 AM393_RS12500 cf3780947b463dc2e97ad474f99e593e 305 Hamap MF_01154 Curved DNA-binding protein [cbpA]. 1 305 53.315 T 28-03-2018 IPR023859 DNA-binding protein, curved-DNA AM393_RS12500 cf3780947b463dc2e97ad474f99e593e 305 Gene3D G3DSA:2.60.260.20 203 281 9.0E-19 T 28-03-2018 AM393_RS12500 cf3780947b463dc2e97ad474f99e593e 305 Pfam PF00226 DnaJ domain 5 66 2.7E-22 T 28-03-2018 IPR001623 DnaJ domain AM393_RS12500 cf3780947b463dc2e97ad474f99e593e 305 SMART SM00271 4 61 3.7E-24 T 28-03-2018 IPR001623 DnaJ domain AM393_RS12500 cf3780947b463dc2e97ad474f99e593e 305 SUPERFAMILY SSF46565 1 102 6.41E-27 T 28-03-2018 IPR001623 DnaJ domain AM393_RS12500 cf3780947b463dc2e97ad474f99e593e 305 Gene3D G3DSA:2.60.260.20 114 198 6.4E-18 T 28-03-2018 AM393_RS12500 cf3780947b463dc2e97ad474f99e593e 305 SUPERFAMILY SSF49493 203 286 2.88E-16 T 28-03-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 AM393_RS12500 cf3780947b463dc2e97ad474f99e593e 305 Pfam PF01556 DnaJ C terminal domain 119 275 1.2E-31 T 28-03-2018 IPR002939 Chaperone DnaJ, C-terminal AM393_RS12500 cf3780947b463dc2e97ad474f99e593e 305 PRINTS PR00625 DnaJ domain signature 25 40 4.5E-18 T 28-03-2018 IPR001623 DnaJ domain AM393_RS12500 cf3780947b463dc2e97ad474f99e593e 305 PRINTS PR00625 DnaJ domain signature 7 25 4.5E-18 T 28-03-2018 IPR001623 DnaJ domain AM393_RS12500 cf3780947b463dc2e97ad474f99e593e 305 PRINTS PR00625 DnaJ domain signature 41 61 4.5E-18 T 28-03-2018 IPR001623 DnaJ domain AM393_RS12500 cf3780947b463dc2e97ad474f99e593e 305 PRINTS PR00625 DnaJ domain signature 61 80 4.5E-18 T 28-03-2018 IPR001623 DnaJ domain AM393_RS12500 cf3780947b463dc2e97ad474f99e593e 305 ProSitePatterns PS00636 Nt-dnaJ domain signature. 46 65 - T 28-03-2018 IPR018253 DnaJ domain, conserved site AM393_RS12500 cf3780947b463dc2e97ad474f99e593e 305 Gene3D G3DSA:1.20.5.460 282 303 1.8E-14 T 28-03-2018 AM393_RS03620 fb462e7f3b6b627bcd4e62896c20da9a 404 Gene3D G3DSA:3.40.640.10 1 237 1.8E-51 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM393_RS03620 fb462e7f3b6b627bcd4e62896c20da9a 404 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 1 395 55.892 T 28-03-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 AM393_RS03620 fb462e7f3b6b627bcd4e62896c20da9a 404 Gene3D G3DSA:3.90.1150.10 238 404 4.7E-53 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM393_RS03620 fb462e7f3b6b627bcd4e62896c20da9a 404 Pfam PF00266 Aminotransferase class-V 5 368 7.0E-89 T 28-03-2018 IPR000192 Aminotransferase class V domain AM393_RS03620 fb462e7f3b6b627bcd4e62896c20da9a 404 PIRSF PIRSF005572 2 384 1.5E-144 T 28-03-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 AM393_RS03620 fb462e7f3b6b627bcd4e62896c20da9a 404 SUPERFAMILY SSF53383 5 390 8.29E-117 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM393_RS03620 fb462e7f3b6b627bcd4e62896c20da9a 404 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 197 216 - T 28-03-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site AM393_RS03620 fb462e7f3b6b627bcd4e62896c20da9a 404 TIGRFAM TIGR02006 IscS: cysteine desulfurase IscS 1 404 1.4E-235 T 28-03-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 AM393_RS27710 4d3642ae67ac688574391a2960deecd8 438 Pfam PF10923 P-loop Domain of unknown function (DUF2791) 6 407 2.5E-161 T 28-03-2018 IPR021228 Protein of unknown function DUF2791 AM393_RS27710 4d3642ae67ac688574391a2960deecd8 438 SUPERFAMILY SSF52540 238 299 6.96E-8 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS27710 4d3642ae67ac688574391a2960deecd8 438 SUPERFAMILY SSF52540 33 121 6.96E-8 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS27710 4d3642ae67ac688574391a2960deecd8 438 Gene3D G3DSA:3.40.50.300 9 340 4.9E-4 T 28-03-2018 AM393_RS22775 2ea3ba057c5a209bc9bf2f0b566d4734 401 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 220 257 - T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM393_RS22775 2ea3ba057c5a209bc9bf2f0b566d4734 401 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 14 396 2.3E-148 T 28-03-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 AM393_RS22775 2ea3ba057c5a209bc9bf2f0b566d4734 401 Gene3D G3DSA:3.40.640.10 174 288 5.7E-43 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM393_RS22775 2ea3ba057c5a209bc9bf2f0b566d4734 401 Gene3D G3DSA:3.90.1150.10 5 173 1.4E-48 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM393_RS22775 2ea3ba057c5a209bc9bf2f0b566d4734 401 TIGRFAM TIGR03246 arg_catab_astC: succinylornithine transaminase family 6 399 2.4E-202 T 28-03-2018 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria GO:0006520|GO:0008483|GO:0030170 AM393_RS22775 2ea3ba057c5a209bc9bf2f0b566d4734 401 Gene3D G3DSA:3.90.1150.10 289 401 4.4E-18 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM393_RS22775 2ea3ba057c5a209bc9bf2f0b566d4734 401 Pfam PF00202 Aminotransferase class-III 22 395 1.0E-121 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM393_RS22775 2ea3ba057c5a209bc9bf2f0b566d4734 401 PIRSF PIRSF000521 26 155 1.0E-8 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM393_RS22775 2ea3ba057c5a209bc9bf2f0b566d4734 401 PIRSF PIRSF000521 169 399 8.1E-31 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM393_RS22775 2ea3ba057c5a209bc9bf2f0b566d4734 401 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 11 397 44.367 T 28-03-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 AM393_RS22775 2ea3ba057c5a209bc9bf2f0b566d4734 401 SUPERFAMILY SSF53383 16 397 4.76E-121 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM393_RS03060 c0f83860666917cde80da52667e1e175 130 SUPERFAMILY SSF46955 4 52 5.77E-10 T 28-03-2018 IPR009061 Putative DNA-binding domain AM393_RS03060 c0f83860666917cde80da52667e1e175 130 Pfam PF07037 Putative transcription regulator (DUF1323) 8 128 4.7E-53 T 28-03-2018 IPR010749 Protein of unknown function DUF1323 AM393_RS03060 c0f83860666917cde80da52667e1e175 130 Gene3D G3DSA:1.10.10.10 7 66 1.2E-8 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS03060 c0f83860666917cde80da52667e1e175 130 ProDom PD060594 TRANSCRIPTION YFED YFEC DNA-BINDING REGULATION NEGATIVE REGULATOR STY2653 ECS3274 STY2652 8 126 3.0E-30 T 28-03-2018 IPR010749 Protein of unknown function DUF1323 AM393_RS18500 ef72015a093e598732b2ffcd2d786150 555 Gene3D G3DSA:3.40.50.620 154 260 2.1E-22 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM393_RS18500 ef72015a093e598732b2ffcd2d786150 555 Gene3D G3DSA:3.40.50.620 42 153 1.5E-38 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM393_RS18500 ef72015a093e598732b2ffcd2d786150 555 Gene3D G3DSA:2.40.240.10 465 548 3.2E-33 T 28-03-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AM393_RS18500 ef72015a093e598732b2ffcd2d786150 555 Gene3D G3DSA:1.10.1160.10 261 338 1.4E-37 T 28-03-2018 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 AM393_RS18500 ef72015a093e598732b2ffcd2d786150 555 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 340 529 2.7E-65 T 28-03-2018 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AM393_RS18500 ef72015a093e598732b2ffcd2d786150 555 Gene3D G3DSA:3.40.50.620 7 41 0.0065 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM393_RS18500 ef72015a093e598732b2ffcd2d786150 555 PRINTS PR00987 Glutamyl-tRNA synthetase signature 60 73 2.4E-9 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AM393_RS18500 ef72015a093e598732b2ffcd2d786150 555 PRINTS PR00987 Glutamyl-tRNA synthetase signature 45 56 2.4E-9 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AM393_RS18500 ef72015a093e598732b2ffcd2d786150 555 PRINTS PR00987 Glutamyl-tRNA synthetase signature 31 43 2.4E-9 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AM393_RS18500 ef72015a093e598732b2ffcd2d786150 555 PRINTS PR00987 Glutamyl-tRNA synthetase signature 210 220 2.4E-9 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AM393_RS18500 ef72015a093e598732b2ffcd2d786150 555 SUPERFAMILY SSF52374 10 337 1.94E-103 T 28-03-2018 AM393_RS18500 ef72015a093e598732b2ffcd2d786150 555 Gene3D G3DSA:2.40.240.10 344 464 9.7E-48 T 28-03-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AM393_RS18500 ef72015a093e598732b2ffcd2d786150 555 SUPERFAMILY SSF50715 340 548 6.28E-80 T 28-03-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AM393_RS18500 ef72015a093e598732b2ffcd2d786150 555 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 34 45 - T 28-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM393_RS18500 ef72015a093e598732b2ffcd2d786150 555 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 1 550 54.076 T 28-03-2018 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 AM393_RS18500 ef72015a093e598732b2ffcd2d786150 555 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 28 552 0.0 T 28-03-2018 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AM393_RS18500 ef72015a093e598732b2ffcd2d786150 555 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 28 337 9.9E-129 T 28-03-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 AM393_RS10765 a6766f1b1a4107a0cb07dfbbef17e019 309 PIRSF PIRSF018296 1 309 1.1E-136 T 28-03-2018 IPR006452 Formate dehydrogenase accessory protein GO:0005737 AM393_RS10765 a6766f1b1a4107a0cb07dfbbef17e019 309 TIGRFAM TIGR01562 FdhE: formate dehydrogenase accessory protein FdhE 2 305 3.9E-149 T 28-03-2018 IPR006452 Formate dehydrogenase accessory protein GO:0005737 AM393_RS10765 a6766f1b1a4107a0cb07dfbbef17e019 309 Gene3D G3DSA:3.90.1670.10 24 308 1.3E-100 T 28-03-2018 IPR024064 FdhE-like AM393_RS10765 a6766f1b1a4107a0cb07dfbbef17e019 309 Pfam PF04216 Protein involved in formate dehydrogenase formation 21 304 1.4E-116 T 28-03-2018 IPR006452 Formate dehydrogenase accessory protein GO:0005737 AM393_RS10765 a6766f1b1a4107a0cb07dfbbef17e019 309 Hamap MF_00611 Protein FdhE [fdhE]. 3 306 49.741 T 28-03-2018 IPR006452 Formate dehydrogenase accessory protein GO:0005737 AM393_RS10765 a6766f1b1a4107a0cb07dfbbef17e019 309 SUPERFAMILY SSF144020 24 306 1.09E-97 T 28-03-2018 IPR024064 FdhE-like AM393_RS16445 7856faf05312e2d23dca029d369ca8fa 491 SUPERFAMILY SSF103473 14 405 9.16E-42 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS16445 7856faf05312e2d23dca029d369ca8fa 491 TIGRFAM TIGR00901 2A0125: AmpG-like permease 25 363 2.5E-124 T 28-03-2018 IPR004752 AmpG-like permease/Acetyl-coenzyme A transporter 1 GO:0016020 Reactome: R-HSA-425397 AM393_RS16445 7856faf05312e2d23dca029d369ca8fa 491 Gene3D G3DSA:1.20.1250.20 208 408 1.0E-17 T 28-03-2018 AM393_RS16445 7856faf05312e2d23dca029d369ca8fa 491 Gene3D G3DSA:1.20.1250.20 1 200 8.5E-22 T 28-03-2018 AM393_RS16445 7856faf05312e2d23dca029d369ca8fa 491 Pfam PF07690 Major Facilitator Superfamily 17 366 9.0E-30 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS00180 e7d2adeefaabe44d25a5a1d6cad0e9e1 764 SUPERFAMILY SSF51998 8 762 1.1E-276 T 28-03-2018 AM393_RS00180 e7d2adeefaabe44d25a5a1d6cad0e9e1 764 ProSitePatterns PS00850 Glycine radical domain signature. 734 742 - T 28-03-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site AM393_RS00180 e7d2adeefaabe44d25a5a1d6cad0e9e1 764 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 15 764 0.0 T 28-03-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 AM393_RS00180 e7d2adeefaabe44d25a5a1d6cad0e9e1 764 Pfam PF02901 Pyruvate formate lyase-like 27 618 2.3E-194 T 28-03-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 AM393_RS00180 e7d2adeefaabe44d25a5a1d6cad0e9e1 764 PIRSF PIRSF000379 12 764 0.0 T 28-03-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 AM393_RS00180 e7d2adeefaabe44d25a5a1d6cad0e9e1 764 Pfam PF01228 Glycine radical 634 745 1.0E-40 T 28-03-2018 IPR001150 Glycine radical domain GO:0003824|GO:0008152 AM393_RS00180 e7d2adeefaabe44d25a5a1d6cad0e9e1 764 Gene3D G3DSA:3.20.70.20 6 764 6.8E-278 T 28-03-2018 AM393_RS04910 e69c2a6570a44a4c9c539d486caca4e2 745 SUPERFAMILY SSF109604 24 207 5.02E-45 T 28-03-2018 AM393_RS04910 e69c2a6570a44a4c9c539d486caca4e2 745 SUPERFAMILY SSF81271 400 466 5.07E-22 T 28-03-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 AM393_RS04910 e69c2a6570a44a4c9c539d486caca4e2 745 Pfam PF04607 Region found in RelA / SpoT proteins 251 360 1.8E-36 T 28-03-2018 IPR007685 RelA/SpoT GO:0015969 AM393_RS04910 e69c2a6570a44a4c9c539d486caca4e2 745 Gene3D G3DSA:3.10.20.30 401 476 9.6E-25 T 28-03-2018 IPR012675 Beta-grasp domain AM393_RS04910 e69c2a6570a44a4c9c539d486caca4e2 745 Gene3D G3DSA:3.30.460.10 208 341 8.5E-43 T 28-03-2018 AM393_RS04910 e69c2a6570a44a4c9c539d486caca4e2 745 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 63 740 4.0E-187 T 28-03-2018 IPR004811 RelA/SpoT family GO:0015969 AM393_RS04910 e69c2a6570a44a4c9c539d486caca4e2 745 SMART SM00954 251 361 3.7E-66 T 28-03-2018 IPR007685 RelA/SpoT GO:0015969 AM393_RS04910 e69c2a6570a44a4c9c539d486caca4e2 745 Pfam PF02824 TGS domain 407 466 4.5E-21 T 28-03-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 AM393_RS04910 e69c2a6570a44a4c9c539d486caca4e2 745 SUPERFAMILY SSF81301 196 411 1.28E-63 T 28-03-2018 AM393_RS04910 e69c2a6570a44a4c9c539d486caca4e2 745 Gene3D G3DSA:3.30.70.260 661 742 1.3E-11 T 28-03-2018 AM393_RS04910 e69c2a6570a44a4c9c539d486caca4e2 745 Pfam PF13291 ACT domain 665 741 7.0E-18 T 28-03-2018 IPR002912 ACT domain AM393_RS04910 e69c2a6570a44a4c9c539d486caca4e2 745 Pfam PF13328 HD domain 51 191 6.5E-39 T 28-03-2018 IPR003607 HD/PDEase domain AM393_RS04910 e69c2a6570a44a4c9c539d486caca4e2 745 SUPERFAMILY SSF55021 666 742 3.28E-14 T 28-03-2018 AM393_RS09635 9624bbbaa6c3ab0b86eb95e71d7b5dae 302 ProDom PD024016 LIPOPOLYSACCHARIDE BIOSYNTHESIS CORE RFAZ WAAZ 62 285 9.0E-7 T 28-03-2018 AM393_RS09635 9624bbbaa6c3ab0b86eb95e71d7b5dae 302 Gene3D G3DSA:3.90.1480.10 48 302 6.3E-40 T 28-03-2018 AM393_RS00765 09f65758c9967279f831c0fc5d9b1990 142 PIRSF PIRSF006276 1 141 3.2E-40 T 28-03-2018 IPR006015 Universal stress protein A AM393_RS00765 09f65758c9967279f831c0fc5d9b1990 142 Gene3D G3DSA:3.40.50.620 2 141 1.1E-17 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM393_RS00765 09f65758c9967279f831c0fc5d9b1990 142 SUPERFAMILY SSF52402 3 138 8.37E-23 T 28-03-2018 AM393_RS00765 09f65758c9967279f831c0fc5d9b1990 142 Pfam PF00582 Universal stress protein family 3 137 1.1E-12 T 28-03-2018 IPR006016 UspA GO:0006950 AM393_RS16395 5393c6581ffa54ad9c9f43935a1aa3dc 106 Pfam PF07978 NIPSNAP 3 104 1.7E-32 T 28-03-2018 IPR012577 NIPSNAP AM393_RS16395 5393c6581ffa54ad9c9f43935a1aa3dc 106 SUPERFAMILY SSF54909 1 106 3.22E-31 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel AM393_RS16395 5393c6581ffa54ad9c9f43935a1aa3dc 106 Gene3D G3DSA:3.30.70.100 1 106 1.4E-30 T 28-03-2018 AM393_RS20265 a54dca12622c1de292a4b521c14dcfb6 400 Gene3D G3DSA:2.30.130.10 8 76 4.4E-27 T 28-03-2018 IPR002478 PUA domain GO:0003723 AM393_RS20265 a54dca12622c1de292a4b521c14dcfb6 400 Pfam PF01472 PUA domain 7 64 1.1E-5 T 28-03-2018 IPR002478 PUA domain GO:0003723 AM393_RS20265 a54dca12622c1de292a4b521c14dcfb6 400 Gene3D G3DSA:3.30.750.80 78 184 1.7E-33 T 28-03-2018 AM393_RS20265 a54dca12622c1de292a4b521c14dcfb6 400 Hamap MF_01857 Ribosomal RNA large subunit methyltransferase I [rlmI]. 5 400 69.823 T 28-03-2018 IPR023542 rRNA large subunit methyltransferase I GO:0008649 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AM393_RS20265 a54dca12622c1de292a4b521c14dcfb6 400 Gene3D G3DSA:3.40.50.150 186 400 1.5E-38 T 28-03-2018 AM393_RS20265 a54dca12622c1de292a4b521c14dcfb6 400 SUPERFAMILY SSF53335 83 396 2.24E-73 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM393_RS20265 a54dca12622c1de292a4b521c14dcfb6 400 SMART SM00359 7 92 9.0E-21 T 28-03-2018 IPR002478 PUA domain GO:0003723 AM393_RS20265 a54dca12622c1de292a4b521c14dcfb6 400 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 186 375 1.8E-29 T 28-03-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 AM393_RS20265 a54dca12622c1de292a4b521c14dcfb6 400 SUPERFAMILY SSF88697 7 76 8.84E-19 T 28-03-2018 IPR015947 PUA-like domain AM393_RS18595 80da9bec38fa4a9e414513187959661a 480 SUPERFAMILY SSF48173 197 470 1.96E-106 T 28-03-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-1368108|Reactome: R-HSA-400253 AM393_RS18595 80da9bec38fa4a9e414513187959661a 480 Pfam PF03441 FAD binding domain of DNA photolyase 272 466 1.2E-83 T 28-03-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-1368108|Reactome: R-HSA-400253 AM393_RS18595 80da9bec38fa4a9e414513187959661a 480 ProSitePatterns PS00691 DNA photolyases class 1 signature 2. 342 361 - T 28-03-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal AM393_RS18595 80da9bec38fa4a9e414513187959661a 480 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 322 334 - T 28-03-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal AM393_RS18595 80da9bec38fa4a9e414513187959661a 480 Gene3D G3DSA:1.10.579.10 290 470 3.6E-75 T 28-03-2018 AM393_RS18595 80da9bec38fa4a9e414513187959661a 480 PRINTS PR00147 DNA photolyase signature 381 395 1.3E-29 T 28-03-2018 IPR002081 Cryptochrome/DNA photolyase class 1 AM393_RS18595 80da9bec38fa4a9e414513187959661a 480 PRINTS PR00147 DNA photolyase signature 322 338 1.3E-29 T 28-03-2018 IPR002081 Cryptochrome/DNA photolyase class 1 AM393_RS18595 80da9bec38fa4a9e414513187959661a 480 PRINTS PR00147 DNA photolyase signature 342 360 1.3E-29 T 28-03-2018 IPR002081 Cryptochrome/DNA photolyase class 1 AM393_RS18595 80da9bec38fa4a9e414513187959661a 480 PRINTS PR00147 DNA photolyase signature 143 159 1.3E-29 T 28-03-2018 IPR002081 Cryptochrome/DNA photolyase class 1 AM393_RS18595 80da9bec38fa4a9e414513187959661a 480 SUPERFAMILY SSF52425 3 197 1.57E-55 T 28-03-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-1368108|Reactome: R-HSA-400253 AM393_RS18595 80da9bec38fa4a9e414513187959661a 480 Gene3D G3DSA:3.40.50.620 1 127 2.9E-31 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM393_RS18595 80da9bec38fa4a9e414513187959661a 480 Gene3D G3DSA:1.25.40.80 132 289 6.1E-37 T 28-03-2018 AM393_RS18595 80da9bec38fa4a9e414513187959661a 480 Pfam PF00875 DNA photolyase 5 168 1.2E-44 T 28-03-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-1368108|Reactome: R-HSA-400253 AM393_RS28890 95d4b0e82e26fbef31ea77b8a02f4a99 213 ProSitePatterns PS00100 Chloramphenicol acetyltransferase active site. 186 196 - T 28-03-2018 IPR018372 Chloramphenicol acetyltransferase, active site GO:0008811 AM393_RS28890 95d4b0e82e26fbef31ea77b8a02f4a99 213 ProDom PD002660 TRANSFERASE CHLORAMPHENICOL ACYLTRANSFERASE ACETYLTRANSFERASE ANTIBIOTIC RESISTANCE PLASMID CAT O-ACETYLTRANSFERASE DIRECT 14 199 2.0E-109 T 28-03-2018 IPR001707 Chloramphenicol acetyltransferase GO:0008811 AM393_RS28890 95d4b0e82e26fbef31ea77b8a02f4a99 213 PIRSF PIRSF000440 1 213 6.4E-87 T 28-03-2018 IPR001707 Chloramphenicol acetyltransferase GO:0008811 AM393_RS28890 95d4b0e82e26fbef31ea77b8a02f4a99 213 Pfam PF00302 Chloramphenicol acetyltransferase 3 205 5.2E-98 T 28-03-2018 IPR001707 Chloramphenicol acetyltransferase GO:0008811 AM393_RS28890 95d4b0e82e26fbef31ea77b8a02f4a99 213 SMART SM01059 1 205 2.0E-100 T 28-03-2018 IPR001707 Chloramphenicol acetyltransferase GO:0008811 AM393_RS28890 95d4b0e82e26fbef31ea77b8a02f4a99 213 Gene3D G3DSA:3.30.559.10 1 210 7.9E-40 T 28-03-2018 AM393_RS28890 95d4b0e82e26fbef31ea77b8a02f4a99 213 SUPERFAMILY SSF52777 1 210 8.9E-75 T 28-03-2018 AM393_RS15705 b98f4a35b0f020c7c0f25a9154e1d91b 325 Hamap MF_01083 Protein CsiD [csiD]. 1 325 73.738 T 28-03-2018 IPR015038 Uncharacterised protein family CsiD GO:0005506 AM393_RS15705 b98f4a35b0f020c7c0f25a9154e1d91b 325 Pfam PF08943 CsiD 21 314 1.5E-149 T 28-03-2018 IPR015038 Uncharacterised protein family CsiD GO:0005506 AM393_RS15705 b98f4a35b0f020c7c0f25a9154e1d91b 325 Gene3D G3DSA:3.60.130.10 15 325 2.0E-65 T 28-03-2018 AM393_RS15705 b98f4a35b0f020c7c0f25a9154e1d91b 325 SUPERFAMILY SSF51197 17 318 9.62E-92 T 28-03-2018 AM393_RS15705 b98f4a35b0f020c7c0f25a9154e1d91b 325 ProDom PD135861 METAL-BINDING IRON CSID GAB CYTOPLASMIC 3D-STRUCTURE HOMOLOG DIRECT SEQUENCING 20 314 4.0E-149 T 28-03-2018 IPR015038 Uncharacterised protein family CsiD GO:0005506 AM393_RS20810 9e0d80ce92b9cf0fc8ea2bf5ddd12413 215 Pfam PF13036 Peptidoglycan-synthase activator LpoB 76 211 5.4E-36 T 28-03-2018 IPR014094 Penicillin-binding protein activator LpoB AM393_RS20810 9e0d80ce92b9cf0fc8ea2bf5ddd12413 215 TIGRFAM TIGR02722 lp_: uncharacterized lipoprotein 6 214 4.2E-55 T 28-03-2018 IPR014094 Penicillin-binding protein activator LpoB AM393_RS20810 9e0d80ce92b9cf0fc8ea2bf5ddd12413 215 Gene3D G3DSA:3.40.50.10070 90 215 2.1E-11 T 28-03-2018 AM393_RS20810 9e0d80ce92b9cf0fc8ea2bf5ddd12413 215 Hamap MF_01889 Penicillin-binding protein activator LpoB [lpoB]. 4 213 33.756 T 28-03-2018 IPR014094 Penicillin-binding protein activator LpoB AM393_RS14125 244a736e1ce58ce10a4156c04e6cde94 152 Pfam PF04073 Aminoacyl-tRNA editing domain 25 139 1.5E-27 T 28-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AM393_RS14125 244a736e1ce58ce10a4156c04e6cde94 152 Gene3D G3DSA:3.90.960.10 1 150 2.5E-39 T 28-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AM393_RS14125 244a736e1ce58ce10a4156c04e6cde94 152 SUPERFAMILY SSF55826 4 151 6.02E-40 T 28-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AM393_RS12330 e71290186f0609905e930d3eeecdbe24 437 Gene3D G3DSA:1.10.3860.10 1 419 6.6E-124 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM393_RS12330 e71290186f0609905e930d3eeecdbe24 437 PRINTS PR00173 Glutamate-aspartate symporter signature 156 178 7.5E-53 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM393_RS12330 e71290186f0609905e930d3eeecdbe24 437 PRINTS PR00173 Glutamate-aspartate symporter signature 82 107 7.5E-53 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM393_RS12330 e71290186f0609905e930d3eeecdbe24 437 PRINTS PR00173 Glutamate-aspartate symporter signature 7 27 7.5E-53 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM393_RS12330 e71290186f0609905e930d3eeecdbe24 437 PRINTS PR00173 Glutamate-aspartate symporter signature 339 358 7.5E-53 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM393_RS12330 e71290186f0609905e930d3eeecdbe24 437 PRINTS PR00173 Glutamate-aspartate symporter signature 204 223 7.5E-53 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM393_RS12330 e71290186f0609905e930d3eeecdbe24 437 PRINTS PR00173 Glutamate-aspartate symporter signature 304 330 7.5E-53 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM393_RS12330 e71290186f0609905e930d3eeecdbe24 437 PRINTS PR00173 Glutamate-aspartate symporter signature 366 386 7.5E-53 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM393_RS12330 e71290186f0609905e930d3eeecdbe24 437 PRINTS PR00173 Glutamate-aspartate symporter signature 52 72 7.5E-53 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM393_RS12330 e71290186f0609905e930d3eeecdbe24 437 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 307 330 - T 28-03-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site AM393_RS12330 e71290186f0609905e930d3eeecdbe24 437 Pfam PF00375 Sodium:dicarboxylate symporter family 9 412 7.2E-115 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM393_RS12330 e71290186f0609905e930d3eeecdbe24 437 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 44 59 - T 28-03-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site AM393_RS12330 e71290186f0609905e930d3eeecdbe24 437 SUPERFAMILY SSF118215 9 413 3.4E-121 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM393_RS12330 e71290186f0609905e930d3eeecdbe24 437 Hamap MF_02063 Proton/glutamate-aspartate symporter [gltP]. 2 429 47.675 T 28-03-2018 IPR034703 Proton/glutamate-aspartate symporter GltP GO:0006835|GO:0015293|GO:0016021 AM393_RS10995 83f3d37fc0ecc4be18c12971be081161 731 SMART SM00487 194 389 2.7E-16 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AM393_RS10995 83f3d37fc0ecc4be18c12971be081161 731 Pfam PF00271 Helicase conserved C-terminal domain 521 588 7.0E-5 T 28-03-2018 IPR001650 Helicase, C-terminal AM393_RS10995 83f3d37fc0ecc4be18c12971be081161 731 TIGRFAM TIGR00595 priA: primosomal protein N' 220 729 3.7E-216 T 28-03-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 AM393_RS10995 83f3d37fc0ecc4be18c12971be081161 731 Hamap MF_00983 Probable primosomal protein N' [priA]. 6 731 26.31 T 28-03-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 AM393_RS10995 83f3d37fc0ecc4be18c12971be081161 731 Pfam PF00270 DEAD/DEAH box helicase 218 363 3.9E-15 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AM393_RS10995 83f3d37fc0ecc4be18c12971be081161 731 Gene3D G3DSA:3.40.50.300 386 648 1.7E-21 T 28-03-2018 AM393_RS10995 83f3d37fc0ecc4be18c12971be081161 731 SMART SM00490 491 588 3.7E-7 T 28-03-2018 IPR001650 Helicase, C-terminal AM393_RS10995 83f3d37fc0ecc4be18c12971be081161 731 SUPERFAMILY SSF52540 212 439 1.78E-39 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS10995 83f3d37fc0ecc4be18c12971be081161 731 SUPERFAMILY SSF52540 502 600 1.78E-39 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS10995 83f3d37fc0ecc4be18c12971be081161 731 Gene3D G3DSA:3.40.50.300 195 360 1.4E-26 T 28-03-2018 AM393_RS03130 d4f2b7fd3c28f7f5901106e84fd6c8bc 575 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 2 566 7.6E-270 T 28-03-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 AM393_RS03130 d4f2b7fd3c28f7f5901106e84fd6c8bc 575 Gene3D G3DSA:3.50.30.10 146 245 2.5E-26 T 28-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AM393_RS03130 d4f2b7fd3c28f7f5901106e84fd6c8bc 575 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 250 541 5.6E-127 T 28-03-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 AM393_RS03130 d4f2b7fd3c28f7f5901106e84fd6c8bc 575 PIRSF PIRSF000732 1 574 5.7E-218 T 28-03-2018 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 AM393_RS03130 d4f2b7fd3c28f7f5901106e84fd6c8bc 575 Pfam PF05524 PEP-utilising enzyme, N-terminal 4 126 2.8E-29 T 28-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 AM393_RS03130 d4f2b7fd3c28f7f5901106e84fd6c8bc 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 293 312 3.5E-31 T 28-03-2018 AM393_RS03130 d4f2b7fd3c28f7f5901106e84fd6c8bc 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 500 512 3.5E-31 T 28-03-2018 AM393_RS03130 d4f2b7fd3c28f7f5901106e84fd6c8bc 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 464 479 3.5E-31 T 28-03-2018 AM393_RS03130 d4f2b7fd3c28f7f5901106e84fd6c8bc 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 447 462 3.5E-31 T 28-03-2018 AM393_RS03130 d4f2b7fd3c28f7f5901106e84fd6c8bc 575 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 184 195 - T 28-03-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 AM393_RS03130 d4f2b7fd3c28f7f5901106e84fd6c8bc 575 Pfam PF00391 PEP-utilising enzyme, mobile domain 152 222 8.1E-23 T 28-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AM393_RS03130 d4f2b7fd3c28f7f5901106e84fd6c8bc 575 Gene3D G3DSA:3.20.20.60 250 573 6.9E-103 T 28-03-2018 AM393_RS03130 d4f2b7fd3c28f7f5901106e84fd6c8bc 575 SUPERFAMILY SSF52009 125 246 1.18E-36 T 28-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AM393_RS03130 d4f2b7fd3c28f7f5901106e84fd6c8bc 575 Gene3D G3DSA:1.10.274.10 24 145 2.3E-35 T 28-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 AM393_RS03130 d4f2b7fd3c28f7f5901106e84fd6c8bc 575 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 447 465 - T 28-03-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 AM393_RS03130 d4f2b7fd3c28f7f5901106e84fd6c8bc 575 SUPERFAMILY SSF51621 249 549 3.93E-110 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AM393_RS03130 d4f2b7fd3c28f7f5901106e84fd6c8bc 575 SUPERFAMILY SSF47831 23 143 1.29E-33 T 28-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 AM393_RS10705 96cac038b167fca69f40f069e8572a42 469 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 164 177 - T 28-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AM393_RS10705 96cac038b167fca69f40f069e8572a42 469 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 226 241 - T 28-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AM393_RS10705 96cac038b167fca69f40f069e8572a42 469 Gene3D G3DSA:3.40.50.300 136 312 1.9E-28 T 28-03-2018 AM393_RS10705 96cac038b167fca69f40f069e8572a42 469 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 7 466 1.4E-245 T 28-03-2018 IPR010114 Signal transduction response regulator, nitrogen regulation NR(I) GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 AM393_RS10705 96cac038b167fca69f40f069e8572a42 469 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 432 449 8.0E-11 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM393_RS10705 96cac038b167fca69f40f069e8572a42 469 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 449 469 8.0E-11 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM393_RS10705 96cac038b167fca69f40f069e8572a42 469 Pfam PF02954 Bacterial regulatory protein, Fis family 427 466 1.7E-15 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM393_RS10705 96cac038b167fca69f40f069e8572a42 469 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 353 362 - T 28-03-2018 IPR025944 Sigma-54 interaction domain, conserved site AM393_RS10705 96cac038b167fca69f40f069e8572a42 469 Gene3D G3DSA:1.10.10.60 383 469 3.5E-26 T 28-03-2018 AM393_RS10705 96cac038b167fca69f40f069e8572a42 469 SMART SM00448 4 115 1.7E-36 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM393_RS10705 96cac038b167fca69f40f069e8572a42 469 Pfam PF00158 Sigma-54 interaction domain 140 306 1.3E-70 T 28-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AM393_RS10705 96cac038b167fca69f40f069e8572a42 469 Pfam PF00072 Response regulator receiver domain 8 115 1.3E-30 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM393_RS10705 96cac038b167fca69f40f069e8572a42 469 SUPERFAMILY SSF52172 7 185 1.25E-46 T 28-03-2018 IPR011006 CheY-like superfamily AM393_RS10705 96cac038b167fca69f40f069e8572a42 469 SUPERFAMILY SSF52540 139 383 4.56E-75 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS10705 96cac038b167fca69f40f069e8572a42 469 Gene3D G3DSA:3.40.50.2300 6 135 4.2E-37 T 28-03-2018 AM393_RS10705 96cac038b167fca69f40f069e8572a42 469 SMART SM00382 160 311 5.3E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS10705 96cac038b167fca69f40f069e8572a42 469 SUPERFAMILY SSF46689 380 469 1.61E-24 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS10705 96cac038b167fca69f40f069e8572a42 469 Gene3D G3DSA:1.10.8.60 313 382 4.4E-23 T 28-03-2018 AM393_RS10890 41b4f30ab2169545233dc801fd852897 328 TIGRFAM TIGR02637 RhaS: rhamnose ABC transporter, rhamnose-binding protein 26 326 1.3E-135 T 28-03-2018 IPR013459 Rhamnose ABC transporter, substrate-binding protein RhaS GO:0015762 AM393_RS10890 41b4f30ab2169545233dc801fd852897 328 Pfam PF13407 Periplasmic binding protein domain 26 285 5.4E-60 T 28-03-2018 IPR025997 Periplasmic binding protein AM393_RS10890 41b4f30ab2169545233dc801fd852897 328 SUPERFAMILY SSF53822 23 324 6.67E-68 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AM393_RS10890 41b4f30ab2169545233dc801fd852897 328 Gene3D G3DSA:3.40.50.2300 22 140 2.6E-20 T 28-03-2018 AM393_RS10890 41b4f30ab2169545233dc801fd852897 328 Gene3D G3DSA:3.40.50.2300 141 297 2.1E-18 T 28-03-2018 AM393_RS26810 94ee959379f25faf3925d7196bfde006 284 SUPERFAMILY SSF51569 3 277 1.56E-104 T 28-03-2018 AM393_RS26810 94ee959379f25faf3925d7196bfde006 284 Pfam PF00793 DAHP synthetase I family 10 275 8.1E-69 T 28-03-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AM393_RS26810 94ee959379f25faf3925d7196bfde006 284 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 13 277 50.019 T 28-03-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AM393_RS26810 94ee959379f25faf3925d7196bfde006 284 Gene3D G3DSA:3.20.20.70 17 280 7.0E-69 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM393_RS26810 94ee959379f25faf3925d7196bfde006 284 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 18 275 5.7E-119 T 28-03-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AM393_RS17815 aa882bc8dee4aef0335349164f7714a1 221 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 13 108 1.3E-26 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AM393_RS17815 aa882bc8dee4aef0335349164f7714a1 221 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 37 209 2.3E-16 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS17815 aa882bc8dee4aef0335349164f7714a1 221 Gene3D G3DSA:1.10.3720.10 1 218 1.2E-33 T 28-03-2018 AM393_RS17815 aa882bc8dee4aef0335349164f7714a1 221 SUPERFAMILY SSF161098 12 205 3.14E-36 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS16190 3979a03d336785f751398a49882ee0d9 605 Gene3D G3DSA:2.60.40.1180 524 605 4.0E-12 T 28-03-2018 AM393_RS16190 3979a03d336785f751398a49882ee0d9 605 SUPERFAMILY SSF51011 530 602 1.39E-9 T 28-03-2018 AM393_RS16190 3979a03d336785f751398a49882ee0d9 605 PIRSF PIRSF036918 1 601 5.7E-235 T 28-03-2018 IPR017069 Maltodextrin glucosidase GO:0004558|GO:0005737|GO:0005975 KEGG: 00052+3.2.1.20|KEGG: 00500+3.2.1.20|MetaCyc: PWY-842 AM393_RS16190 3979a03d336785f751398a49882ee0d9 605 SMART SM00642 127 521 4.4E-86 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AM393_RS16190 3979a03d336785f751398a49882ee0d9 605 Pfam PF00128 Alpha amylase, catalytic domain 177 493 4.7E-86 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AM393_RS16190 3979a03d336785f751398a49882ee0d9 605 Gene3D G3DSA:2.60.40.10 6 111 6.0E-6 T 28-03-2018 IPR013783 Immunoglobulin-like fold AM393_RS16190 3979a03d336785f751398a49882ee0d9 605 Pfam PF02903 Alpha amylase, N-terminal ig-like domain 4 104 2.6E-5 T 28-03-2018 IPR004185 Glycoside hydrolase, family 13, N-terminal Ig-like domain GO:0004553|GO:0005975 AM393_RS16190 3979a03d336785f751398a49882ee0d9 605 Gene3D G3DSA:3.20.20.80 115 523 2.0E-87 T 28-03-2018 AM393_RS16190 3979a03d336785f751398a49882ee0d9 605 SUPERFAMILY SSF51445 117 530 2.77E-89 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily AM393_RS26740 fb12b650271256624457a6522f380a45 592 SUPERFAMILY SSF55874 467 583 9.3E-20 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS26740 fb12b650271256624457a6522f380a45 592 SUPERFAMILY SSF158472 177 225 4.18E-6 T 28-03-2018 AM393_RS26740 fb12b650271256624457a6522f380a45 592 SMART SM00387 494 587 8.2E-15 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS26740 fb12b650271256624457a6522f380a45 592 Pfam PF00672 HAMP domain 177 224 1.0E-8 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM393_RS26740 fb12b650271256624457a6522f380a45 592 SMART SM00304 176 228 1.5E-9 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM393_RS26740 fb12b650271256624457a6522f380a45 592 Pfam PF07730 Histidine kinase 390 453 1.7E-18 T 28-03-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 AM393_RS26740 fb12b650271256624457a6522f380a45 592 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 497 583 4.6E-11 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS26740 fb12b650271256624457a6522f380a45 592 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 38 129 2.5E-9 T 28-03-2018 IPR029095 NarX-like, N-terminal AM393_RS26740 fb12b650271256624457a6522f380a45 592 Gene3D G3DSA:3.30.565.10 453 588 2.9E-25 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS26740 fb12b650271256624457a6522f380a45 592 PIRSF PIRSF003167 1 592 4.3E-188 T 28-03-2018 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing GO:0000155|GO:0000160|GO:0004673|GO:0016021 AM393_RS21295 626d5647dac891d48bf0c6d87f87a1eb 347 SUPERFAMILY SSF51735 144 310 5.55E-34 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS21295 626d5647dac891d48bf0c6d87f87a1eb 347 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 139 1.8E-29 T 28-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AM393_RS21295 626d5647dac891d48bf0c6d87f87a1eb 347 SUPERFAMILY SSF50129 7 178 4.87E-48 T 28-03-2018 IPR011032 GroES-like AM393_RS21295 626d5647dac891d48bf0c6d87f87a1eb 347 Pfam PF00107 Zinc-binding dehydrogenase 180 302 4.0E-23 T 28-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AM393_RS21295 626d5647dac891d48bf0c6d87f87a1eb 347 SMART SM00829 9 343 0.0017 T 28-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AM393_RS21295 626d5647dac891d48bf0c6d87f87a1eb 347 Gene3D G3DSA:3.40.50.10730 155 340 2.6E-27 T 28-03-2018 AM393_RS21295 626d5647dac891d48bf0c6d87f87a1eb 347 Gene3D G3DSA:3.90.180.10 1 154 1.9E-43 T 28-03-2018 AM393_RS21295 626d5647dac891d48bf0c6d87f87a1eb 347 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 64 78 - T 28-03-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 AM393_RS25560 8d41c48326bc6b17c8640ff52188267f 334 Gene3D G3DSA:1.10.10.10 4 84 5.6E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS25560 8d41c48326bc6b17c8640ff52188267f 334 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 62 5.1E-20 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS25560 8d41c48326bc6b17c8640ff52188267f 334 Gene3D G3DSA:3.40.190.10 89 179 2.6E-10 T 28-03-2018 AM393_RS25560 8d41c48326bc6b17c8640ff52188267f 334 Pfam PF03466 LysR substrate binding domain 88 290 1.2E-28 T 28-03-2018 IPR005119 LysR, substrate-binding AM393_RS25560 8d41c48326bc6b17c8640ff52188267f 334 Gene3D G3DSA:3.40.190.10 180 265 3.4E-8 T 28-03-2018 AM393_RS25560 8d41c48326bc6b17c8640ff52188267f 334 SUPERFAMILY SSF53850 88 290 1.14E-29 T 28-03-2018 AM393_RS25560 8d41c48326bc6b17c8640ff52188267f 334 SUPERFAMILY SSF46785 6 88 6.03E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS26510 4575d121aed7e380d8628b0cfe2f282b 327 SUPERFAMILY SSF46589 14 99 1.1E-22 T 28-03-2018 IPR010978 tRNA-binding arm GO:0000166 AM393_RS26510 4575d121aed7e380d8628b0cfe2f282b 327 Pfam PF01409 tRNA synthetases class II core domain (F) 92 326 1.0E-107 T 28-03-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 AM393_RS26510 4575d121aed7e380d8628b0cfe2f282b 327 Gene3D G3DSA:3.30.930.10 7 327 3.6E-90 T 28-03-2018 AM393_RS26510 4575d121aed7e380d8628b0cfe2f282b 327 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 8 326 50.049 T 28-03-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 AM393_RS26510 4575d121aed7e380d8628b0cfe2f282b 327 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 38 327 7.0E-119 T 28-03-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 AM393_RS26510 4575d121aed7e380d8628b0cfe2f282b 327 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 20 87 6.2E-27 T 28-03-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 AM393_RS26510 4575d121aed7e380d8628b0cfe2f282b 327 SUPERFAMILY SSF55681 92 327 8.8E-82 T 28-03-2018 AM393_RS02920 ea61ec2a1a144e0d3462f34d72e5692b 161 TIGRFAM TIGR00249 sixA: phosphohistidine phosphatase SixA 1 152 1.4E-58 T 28-03-2018 IPR004449 Phosphohistidine phosphatase SixA GO:0005737|GO:0006464|GO:0008969 AM393_RS02920 ea61ec2a1a144e0d3462f34d72e5692b 161 SUPERFAMILY SSF53254 1 145 1.09E-19 T 28-03-2018 IPR029033 Histidine phosphatase superfamily AM393_RS02920 ea61ec2a1a144e0d3462f34d72e5692b 161 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 73 7.8E-7 T 28-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AM393_RS02920 ea61ec2a1a144e0d3462f34d72e5692b 161 Gene3D G3DSA:3.40.50.1240 1 161 1.6E-22 T 28-03-2018 IPR029033 Histidine phosphatase superfamily AM393_RS22395 a8ab9e4cf74889d3d47a5c6601a72b54 584 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 6 581 6.7E-170 T 28-03-2018 IPR010272 Type VI secretion system, TssF-like AM393_RS22395 a8ab9e4cf74889d3d47a5c6601a72b54 584 PIRSF PIRSF028304 1 583 2.0E-160 T 28-03-2018 IPR010272 Type VI secretion system, TssF-like AM393_RS22395 a8ab9e4cf74889d3d47a5c6601a72b54 584 Pfam PF05947 Type VI secretion system, TssF 6 581 1.2E-185 T 28-03-2018 IPR010272 Type VI secretion system, TssF-like AM393_RS20910 9ae202a34f6f4ef0519c508e1f88bebd 348 SUPERFAMILY SSF53850 27 345 8.4E-96 T 28-03-2018 AM393_RS20910 9ae202a34f6f4ef0519c508e1f88bebd 348 PIRSF PIRSF019574 1 348 8.8E-134 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM393_RS20910 9ae202a34f6f4ef0519c508e1f88bebd 348 Gene3D G3DSA:3.40.190.10 24 147 5.8E-18 T 28-03-2018 AM393_RS20910 9ae202a34f6f4ef0519c508e1f88bebd 348 Pfam PF13343 Bacterial extracellular solute-binding protein 77 319 7.4E-38 T 28-03-2018 AM393_RS20910 9ae202a34f6f4ef0519c508e1f88bebd 348 Gene3D G3DSA:3.40.190.10 148 287 2.2E-33 T 28-03-2018 AM393_RS20910 9ae202a34f6f4ef0519c508e1f88bebd 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 204 223 1.9E-94 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM393_RS20910 9ae202a34f6f4ef0519c508e1f88bebd 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 92 105 1.9E-94 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM393_RS20910 9ae202a34f6f4ef0519c508e1f88bebd 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 32 48 1.9E-94 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM393_RS20910 9ae202a34f6f4ef0519c508e1f88bebd 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 149 163 1.9E-94 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM393_RS20910 9ae202a34f6f4ef0519c508e1f88bebd 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 167 186 1.9E-94 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM393_RS20910 9ae202a34f6f4ef0519c508e1f88bebd 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 76 90 1.9E-94 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM393_RS20910 9ae202a34f6f4ef0519c508e1f88bebd 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 123 139 1.9E-94 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM393_RS20910 9ae202a34f6f4ef0519c508e1f88bebd 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 48 69 1.9E-94 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM393_RS20910 9ae202a34f6f4ef0519c508e1f88bebd 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 293 319 1.9E-94 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM393_RS20910 9ae202a34f6f4ef0519c508e1f88bebd 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 248 267 1.9E-94 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM393_RS13225 32ed8eeee0bf0894c011c9108ee65138 153 SUPERFAMILY SSF57825 102 150 7.85E-15 T 28-03-2018 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal AM393_RS13225 32ed8eeee0bf0894c011c9108ee65138 153 ProDom PD006194 REGULATORY ASPARTATE CARBAMOYLTRANSFERASE CHAIN METAL-BINDING ZINC PYRIMIDINE BIOSYNTHESIS SUBUNIT TRANSFERASE 9 99 2.0E-38 T 28-03-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal AM393_RS13225 32ed8eeee0bf0894c011c9108ee65138 153 SUPERFAMILY SSF54893 2 100 1.83E-35 T 28-03-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal AM393_RS13225 32ed8eeee0bf0894c011c9108ee65138 153 Gene3D G3DSA:2.30.30.20 102 150 4.4E-18 T 28-03-2018 AM393_RS13225 32ed8eeee0bf0894c011c9108ee65138 153 Pfam PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain 102 147 8.8E-18 T 28-03-2018 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal AM393_RS13225 32ed8eeee0bf0894c011c9108ee65138 153 Hamap MF_00002 Aspartate carbamoyltransferase regulatory chain [pyrI]. 4 152 32.839 T 28-03-2018 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 AM393_RS13225 32ed8eeee0bf0894c011c9108ee65138 153 Pfam PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain 7 96 1.2E-30 T 28-03-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal AM393_RS13225 32ed8eeee0bf0894c011c9108ee65138 153 Gene3D G3DSA:3.30.70.140 5 97 9.1E-35 T 28-03-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal AM393_RS13225 32ed8eeee0bf0894c011c9108ee65138 153 TIGRFAM TIGR00240 ATCase_reg: aspartate carbamoyltransferase, regulatory subunit 5 152 4.8E-71 T 28-03-2018 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 AM393_RS10500 ed458bb41ce9ef164d034a043a5f0603 460 SUPERFAMILY SSF52540 77 348 1.7E-90 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS10500 ed458bb41ce9ef164d034a043a5f0603 460 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 460 56.982 T 28-03-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 AM393_RS10500 ed458bb41ce9ef164d034a043a5f0603 460 Gene3D G3DSA:1.10.1140.10 348 458 1.4E-45 T 28-03-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AM393_RS10500 ed458bb41ce9ef164d034a043a5f0603 460 SMART SM00382 142 327 4.5E-4 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS10500 ed458bb41ce9ef164d034a043a5f0603 460 SUPERFAMILY SSF50615 1 75 8.89E-24 T 28-03-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AM393_RS10500 ed458bb41ce9ef164d034a043a5f0603 460 SUPERFAMILY SSF47917 345 459 3.92E-55 T 28-03-2018 AM393_RS10500 ed458bb41ce9ef164d034a043a5f0603 460 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 460 7.6E-263 T 28-03-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 AM393_RS10500 ed458bb41ce9ef164d034a043a5f0603 460 Gene3D G3DSA:2.40.10.170 1 75 1.4E-29 T 28-03-2018 AM393_RS10500 ed458bb41ce9ef164d034a043a5f0603 460 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 130 342 4.1E-64 T 28-03-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AM393_RS10500 ed458bb41ce9ef164d034a043a5f0603 460 Gene3D G3DSA:3.40.50.300 76 347 7.2E-91 T 28-03-2018 AM393_RS10500 ed458bb41ce9ef164d034a043a5f0603 460 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 333 342 - T 28-03-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AM393_RS10500 ed458bb41ce9ef164d034a043a5f0603 460 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 72 2.9E-19 T 28-03-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AM393_RS04935 f9a3c69369ef28204bf3ec0923864940 446 SMART SM00922 184 284 4.9E-16 T 28-03-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal AM393_RS04935 f9a3c69369ef28204bf3ec0923864940 446 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 111 136 - T 28-03-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 AM393_RS04935 f9a3c69369ef28204bf3ec0923864940 446 Gene3D G3DSA:3.30.390.10 8 143 7.6E-35 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM393_RS04935 f9a3c69369ef28204bf3ec0923864940 446 Gene3D G3DSA:3.20.20.120 144 413 6.0E-55 T 28-03-2018 IPR029065 Enolase C-terminal domain-like AM393_RS04935 f9a3c69369ef28204bf3ec0923864940 446 Pfam PF13378 Enolase C-terminal domain-like 187 404 6.0E-39 T 28-03-2018 IPR029065 Enolase C-terminal domain-like AM393_RS04935 f9a3c69369ef28204bf3ec0923864940 446 SUPERFAMILY SSF54826 7 136 3.87E-31 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM393_RS04935 f9a3c69369ef28204bf3ec0923864940 446 SUPERFAMILY SSF51604 138 414 9.53E-83 T 28-03-2018 IPR029065 Enolase C-terminal domain-like AM393_RS04935 f9a3c69369ef28204bf3ec0923864940 446 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 39 136 5.6E-8 T 28-03-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain AM393_RS19860 789b8ea3e7e78fdb4bc5b3d254e90827 759 Gene3D G3DSA:1.10.8.60 352 438 2.0E-27 T 28-03-2018 AM393_RS19860 789b8ea3e7e78fdb4bc5b3d254e90827 759 Gene3D G3DSA:3.40.50.300 443 653 2.9E-43 T 28-03-2018 AM393_RS19860 789b8ea3e7e78fdb4bc5b3d254e90827 759 SMART SM00382 488 655 1.5E-7 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS19860 789b8ea3e7e78fdb4bc5b3d254e90827 759 SMART SM00382 207 352 1.6E-13 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS19860 789b8ea3e7e78fdb4bc5b3d254e90827 759 Pfam PF07724 AAA domain (Cdc48 subfamily) 487 648 2.0E-47 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AM393_RS19860 789b8ea3e7e78fdb4bc5b3d254e90827 759 SUPERFAMILY SSF52540 170 427 1.44E-68 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS19860 789b8ea3e7e78fdb4bc5b3d254e90827 759 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 13 62 7.9E-15 T 28-03-2018 IPR004176 Clp, N-terminal GO:0019538 AM393_RS19860 789b8ea3e7e78fdb4bc5b3d254e90827 759 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 303 315 - T 28-03-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 AM393_RS19860 789b8ea3e7e78fdb4bc5b3d254e90827 759 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 735 0.0 T 28-03-2018 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0004176 AM393_RS19860 789b8ea3e7e78fdb4bc5b3d254e90827 759 SUPERFAMILY SSF52540 438 749 7.17E-78 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS19860 789b8ea3e7e78fdb4bc5b3d254e90827 759 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 563 581 4.8E-36 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 AM393_RS19860 789b8ea3e7e78fdb4bc5b3d254e90827 759 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 534 552 4.8E-36 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 AM393_RS19860 789b8ea3e7e78fdb4bc5b3d254e90827 759 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 492 510 4.8E-36 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 AM393_RS19860 789b8ea3e7e78fdb4bc5b3d254e90827 759 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 596 610 4.8E-36 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 AM393_RS19860 789b8ea3e7e78fdb4bc5b3d254e90827 759 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 212 343 7.3E-13 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AM393_RS19860 789b8ea3e7e78fdb4bc5b3d254e90827 759 Gene3D G3DSA:1.10.8.60 654 759 3.5E-24 T 28-03-2018 AM393_RS19860 789b8ea3e7e78fdb4bc5b3d254e90827 759 Gene3D G3DSA:1.10.1780.10 1 143 5.0E-28 T 28-03-2018 IPR004176 Clp, N-terminal GO:0019538 AM393_RS19860 789b8ea3e7e78fdb4bc5b3d254e90827 759 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 519 537 - T 28-03-2018 IPR028299 ClpA/B, conserved site 2 AM393_RS19860 789b8ea3e7e78fdb4bc5b3d254e90827 759 Gene3D G3DSA:3.40.50.300 166 351 1.0E-28 T 28-03-2018 AM393_RS19860 789b8ea3e7e78fdb4bc5b3d254e90827 759 SMART SM01086 654 743 6.3E-34 T 28-03-2018 IPR019489 Clp ATPase, C-terminal AM393_RS19860 789b8ea3e7e78fdb4bc5b3d254e90827 759 SUPERFAMILY SSF81923 1 141 3.92E-58 T 28-03-2018 IPR004176 Clp, N-terminal GO:0019538 AM393_RS19860 789b8ea3e7e78fdb4bc5b3d254e90827 759 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 654 734 6.2E-24 T 28-03-2018 IPR019489 Clp ATPase, C-terminal AM393_RS25290 0aaea71ee99abdb459eece67fbf0fa88 362 SUPERFAMILY SSF50129 316 361 4.0E-5 T 28-03-2018 IPR011032 GroES-like AM393_RS25290 0aaea71ee99abdb459eece67fbf0fa88 362 SMART SM00829 10 361 0.003 T 28-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AM393_RS25290 0aaea71ee99abdb459eece67fbf0fa88 362 Pfam PF00107 Zinc-binding dehydrogenase 195 313 6.0E-25 T 28-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AM393_RS25290 0aaea71ee99abdb459eece67fbf0fa88 362 Gene3D G3DSA:3.90.180.10 3 181 4.0E-40 T 28-03-2018 AM393_RS25290 0aaea71ee99abdb459eece67fbf0fa88 362 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 60 74 - T 28-03-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 AM393_RS25290 0aaea71ee99abdb459eece67fbf0fa88 362 SUPERFAMILY SSF50129 1 191 5.48E-58 T 28-03-2018 IPR011032 GroES-like AM393_RS25290 0aaea71ee99abdb459eece67fbf0fa88 362 Gene3D G3DSA:3.40.50.10730 182 305 4.4E-28 T 28-03-2018 AM393_RS25290 0aaea71ee99abdb459eece67fbf0fa88 362 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 117 5.3E-23 T 28-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AM393_RS25290 0aaea71ee99abdb459eece67fbf0fa88 362 SUPERFAMILY SSF51735 158 328 7.07E-39 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS25015 ed622297b9014cf49bbebfa28b668782 205 SUPERFAMILY SSF52833 2 79 4.84E-11 T 28-03-2018 IPR012336 Thioredoxin-like fold AM393_RS25015 ed622297b9014cf49bbebfa28b668782 205 Gene3D G3DSA:3.40.30.10 1 99 4.2E-13 T 28-03-2018 AM393_RS25015 ed622297b9014cf49bbebfa28b668782 205 SUPERFAMILY SSF47616 79 201 3.27E-15 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like AM393_RS25015 ed622297b9014cf49bbebfa28b668782 205 Pfam PF13417 Glutathione S-transferase, N-terminal domain 17 80 6.0E-8 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AM393_RS25015 ed622297b9014cf49bbebfa28b668782 205 Gene3D G3DSA:1.20.1050.10 100 200 5.4E-12 T 28-03-2018 AM393_RS08885 4450afaafeeaa5fd0571e08426a109cb 414 Pfam PF03222 Tryptophan/tyrosine permease family 23 397 6.8E-32 T 28-03-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 AM393_RS09425 779ff14448d100c4da62ea15c17bc3f5 123 Pfam PF05360 yiaA/B two helix domain 63 114 2.9E-12 T 28-03-2018 IPR008024 YiaAB two helix AM393_RS09425 779ff14448d100c4da62ea15c17bc3f5 123 Pfam PF05360 yiaA/B two helix domain 10 52 3.7E-6 T 28-03-2018 IPR008024 YiaAB two helix AM393_RS27870 ba85cb220bd1df1bb9e1248866757dcd 51 Gene3D G3DSA:3.30.420.10 1 51 1.5E-5 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM393_RS27870 ba85cb220bd1df1bb9e1248866757dcd 51 Pfam PF13333 Integrase core domain 1 49 4.2E-9 T 28-03-2018 IPR001584 Integrase, catalytic core GO:0015074 AM393_RS00190 b4887c97d161ed2d831b8151ebc93b61 443 TIGRFAM TIGR00814 stp: serine transporter 17 433 3.7E-168 T 28-03-2018 IPR004694 Hydroxy amino acid transporter GO:0005215|GO:0006810|GO:0016021 AM393_RS00190 b4887c97d161ed2d831b8151ebc93b61 443 Hamap MF_01583 Threonine/serine transporter TdcC [tdcC]. 1 443 59.359 T 28-03-2018 IPR023726 Threonine/serine transporter TdcC GO:0015565|GO:0015826|GO:0016021|GO:0022889|GO:0032329 AM393_RS00190 b4887c97d161ed2d831b8151ebc93b61 443 Pfam PF03222 Tryptophan/tyrosine permease family 29 433 1.1E-8 T 28-03-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 AM393_RS14720 747202306424a0a208eb64c021e3cab9 436 PIRSF PIRSF002808 1 436 2.9E-33 T 28-03-2018 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 AM393_RS14720 747202306424a0a208eb64c021e3cab9 436 SUPERFAMILY SSF103473 16 434 5.1E-82 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS14720 747202306424a0a208eb64c021e3cab9 436 Gene3D G3DSA:1.20.1250.20 16 216 4.6E-39 T 28-03-2018 AM393_RS14720 747202306424a0a208eb64c021e3cab9 436 Pfam PF07690 Major Facilitator Superfamily 31 392 1.5E-53 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS14720 747202306424a0a208eb64c021e3cab9 436 Gene3D G3DSA:1.20.1250.20 220 436 6.6E-26 T 28-03-2018 AM393_RS14505 8668772cfd3679f4f9935d001aeadfaf 83 TIGRFAM TIGR01195 oadG_fam: sodium pump decarboxylases, gamma subunit 4 82 3.3E-27 T 28-03-2018 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0071436 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 AM393_RS14505 8668772cfd3679f4f9935d001aeadfaf 83 Hamap MF_00404 Probable oxaloacetate decarboxylase gamma chain [oadG]. 1 83 33.834 T 28-03-2018 IPR023424 Oxaloacetate decarboxylase gamma chain, probable GO:0008948 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 AM393_RS14505 8668772cfd3679f4f9935d001aeadfaf 83 Pfam PF04277 Oxaloacetate decarboxylase, gamma chain 10 79 4.2E-18 T 28-03-2018 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0071436 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 AM393_RS06990 4a32d64f6e268735e7a682679e5effb0 101 ProDom PD070929 HDEB PRECURSOR SIGNAL EXPORTED PERIPLASMIC SECRETED ECS4389 10K-L SEQUENCING DIRECT 30 101 2.0E-20 T 28-03-2018 AM393_RS06990 4a32d64f6e268735e7a682679e5effb0 101 Pfam PF06411 HdeA/HdeB family 9 93 2.9E-23 T 28-03-2018 IPR010486 HNS-dependent expression A/B AM393_RS06990 4a32d64f6e268735e7a682679e5effb0 101 Gene3D G3DSA:1.10.890.10 25 97 2.2E-24 T 28-03-2018 AM393_RS06990 4a32d64f6e268735e7a682679e5effb0 101 Hamap MF_00947 Acid stress chaperone HdeB [hdeB]. 3 100 28.183 T 28-03-2018 IPR028623 HNS-dependent expression B GO:0009268|GO:0051082 AM393_RS04555 cebba16b295ac7c71a246c7a44eec01a 569 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 87 141 8.0E-25 T 28-03-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM393_RS04555 cebba16b295ac7c71a246c7a44eec01a 569 Gene3D G3DSA:1.10.645.10 175 381 9.1E-45 T 28-03-2018 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM393_RS04555 cebba16b295ac7c71a246c7a44eec01a 569 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 36 152 2.6E-27 T 28-03-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM393_RS04555 cebba16b295ac7c71a246c7a44eec01a 569 Pfam PF00374 Nickel-dependent hydrogenase 218 286 6.4E-13 T 28-03-2018 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 AM393_RS04555 cebba16b295ac7c71a246c7a44eec01a 569 Gene3D G3DSA:1.10.645.10 382 535 1.1E-30 T 28-03-2018 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM393_RS04555 cebba16b295ac7c71a246c7a44eec01a 569 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 216 227 - T 28-03-2018 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM393_RS04555 cebba16b295ac7c71a246c7a44eec01a 569 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 468 537 7.4E-11 T 28-03-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM393_RS04555 cebba16b295ac7c71a246c7a44eec01a 569 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 296 464 1.5E-34 T 28-03-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM393_RS04555 cebba16b295ac7c71a246c7a44eec01a 569 SUPERFAMILY SSF56762 193 537 4.71E-109 T 28-03-2018 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM393_RS04555 cebba16b295ac7c71a246c7a44eec01a 569 SUPERFAMILY SSF143243 9 194 3.01E-47 T 28-03-2018 AM393_RS29105 370151e214905867ad1244cbd1686dbd 258 Pfam PF00589 Phage integrase family 40 231 3.9E-46 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM393_RS29105 370151e214905867ad1244cbd1686dbd 258 Gene3D G3DSA:1.10.443.10 36 245 2.1E-27 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM393_RS29105 370151e214905867ad1244cbd1686dbd 258 PIRSF PIRSF004576 2 256 5.4E-116 T 28-03-2018 IPR016423 Resolvase, Rsv AM393_RS29105 370151e214905867ad1244cbd1686dbd 258 SUPERFAMILY SSF56349 38 232 8.54E-27 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AM393_RS24350 2f03a0bcc999099af91536b0ba8f2b80 347 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 48 291 7.1E-19 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AM393_RS24350 2f03a0bcc999099af91536b0ba8f2b80 347 SUPERFAMILY SSF111369 171 269 1.18E-14 T 28-03-2018 AM393_RS24350 2f03a0bcc999099af91536b0ba8f2b80 347 Gene3D G3DSA:1.20.1600.10 6 309 4.7E-25 T 28-03-2018 AM393_RS24350 2f03a0bcc999099af91536b0ba8f2b80 347 Pfam PF00529 HlyD membrane-fusion protein of T1SS 25 336 7.0E-7 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AM393_RS24350 2f03a0bcc999099af91536b0ba8f2b80 347 SUPERFAMILY SSF111369 49 103 1.96E-7 T 28-03-2018 AM393_RS24350 2f03a0bcc999099af91536b0ba8f2b80 347 SUPERFAMILY SSF111369 139 174 1.96E-7 T 28-03-2018 AM393_RS21495 1acb8d49f6bb1b2e327567dc3ddc75f0 448 Gene3D G3DSA:3.40.50.720 2 169 5.2E-29 T 28-03-2018 AM393_RS21495 1acb8d49f6bb1b2e327567dc3ddc75f0 448 SUPERFAMILY SSF51735 4 167 3.83E-56 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS21495 1acb8d49f6bb1b2e327567dc3ddc75f0 448 Gene3D G3DSA:3.90.110.10 171 448 2.9E-70 T 28-03-2018 AM393_RS21495 1acb8d49f6bb1b2e327567dc3ddc75f0 448 PRINTS PR00732 Glycosyl hydrolase family 4 signature 98 111 1.4E-49 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AM393_RS21495 1acb8d49f6bb1b2e327567dc3ddc75f0 448 PRINTS PR00732 Glycosyl hydrolase family 4 signature 112 132 1.4E-49 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AM393_RS21495 1acb8d49f6bb1b2e327567dc3ddc75f0 448 PRINTS PR00732 Glycosyl hydrolase family 4 signature 194 206 1.4E-49 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AM393_RS21495 1acb8d49f6bb1b2e327567dc3ddc75f0 448 PRINTS PR00732 Glycosyl hydrolase family 4 signature 77 93 1.4E-49 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AM393_RS21495 1acb8d49f6bb1b2e327567dc3ddc75f0 448 PRINTS PR00732 Glycosyl hydrolase family 4 signature 6 21 1.4E-49 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AM393_RS21495 1acb8d49f6bb1b2e327567dc3ddc75f0 448 PRINTS PR00732 Glycosyl hydrolase family 4 signature 141 158 1.4E-49 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AM393_RS21495 1acb8d49f6bb1b2e327567dc3ddc75f0 448 PRINTS PR00732 Glycosyl hydrolase family 4 signature 167 178 1.4E-49 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AM393_RS21495 1acb8d49f6bb1b2e327567dc3ddc75f0 448 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 199 415 6.1E-35 T 28-03-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 AM393_RS21495 1acb8d49f6bb1b2e327567dc3ddc75f0 448 ProSitePatterns PS01324 Glycosyl hydrolases family 4 signature. 141 172 - T 28-03-2018 IPR019802 Glycoside hydrolase, family 4, conserved site GO:0004553|GO:0005975 AM393_RS21495 1acb8d49f6bb1b2e327567dc3ddc75f0 448 SUPERFAMILY SSF56327 173 442 1.81E-77 T 28-03-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 AM393_RS21495 1acb8d49f6bb1b2e327567dc3ddc75f0 448 Pfam PF02056 Family 4 glycosyl hydrolase 6 187 2.0E-75 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AM393_RS20460 8167a2f24b8886006b088973960e6407 236 TIGRFAM TIGR03614 RutB: pyrimidine utilization protein B 3 225 1.4E-134 T 28-03-2018 IPR019916 Isochorismatase, RutB GO:0016811 KEGG: 00240+3.5.1.110|KEGG: 00311+3.5.1.11 AM393_RS20460 8167a2f24b8886006b088973960e6407 236 SUPERFAMILY SSF52499 3 221 6.28E-57 T 28-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AM393_RS20460 8167a2f24b8886006b088973960e6407 236 Hamap MF_00830 Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB [rutB]. 1 228 61.137 T 28-03-2018 IPR019916 Isochorismatase, RutB GO:0016811 KEGG: 00240+3.5.1.110|KEGG: 00311+3.5.1.11 AM393_RS20460 8167a2f24b8886006b088973960e6407 236 Pfam PF00857 Isochorismatase family 18 215 7.6E-41 T 28-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AM393_RS20460 8167a2f24b8886006b088973960e6407 236 Gene3D G3DSA:3.40.50.850 5 234 2.6E-51 T 28-03-2018 AM393_RS12350 e8c5c605b72adcc76b239ef53d64f7f2 252 Pfam PF17194 Transcriptional regulator, AbiEi antitoxin N-terminal domain 1 93 7.3E-34 T 28-03-2018 IPR033455 Transcriptional regulator AbiEi antitoxin, N-terminal domain AM393_RS12350 e8c5c605b72adcc76b239ef53d64f7f2 252 Pfam PF11459 Transcriptional regulator, AbiEi antitoxin, Type IV TA system 95 246 2.7E-47 T 28-03-2018 IPR021561 Transcriptional regulator, AbiEi 3 antitoxin, Type IV TA system AM393_RS01985 f8e26a20521fc751879bce18e6bf00b4 303 SUPERFAMILY SSF53850 102 302 7.09E-31 T 28-03-2018 AM393_RS01985 f8e26a20521fc751879bce18e6bf00b4 303 Gene3D G3DSA:3.40.190.10 189 277 3.4E-18 T 28-03-2018 AM393_RS01985 f8e26a20521fc751879bce18e6bf00b4 303 SUPERFAMILY SSF46785 12 94 1.43E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS01985 f8e26a20521fc751879bce18e6bf00b4 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 49 60 2.7E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS01985 f8e26a20521fc751879bce18e6bf00b4 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 49 2.7E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS01985 f8e26a20521fc751879bce18e6bf00b4 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 28 39 2.7E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS01985 f8e26a20521fc751879bce18e6bf00b4 303 Gene3D G3DSA:3.40.190.10 99 188 1.7E-20 T 28-03-2018 AM393_RS01985 f8e26a20521fc751879bce18e6bf00b4 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 71 5.5E-15 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS01985 f8e26a20521fc751879bce18e6bf00b4 303 Gene3D G3DSA:1.10.10.10 3 96 5.7E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS01985 f8e26a20521fc751879bce18e6bf00b4 303 Pfam PF03466 LysR substrate binding domain 99 302 3.2E-33 T 28-03-2018 IPR005119 LysR, substrate-binding AM393_RS05865 86362d7b054746b4c487df8af50662e0 173 Gene3D G3DSA:3.40.50.360 76 173 2.9E-17 T 28-03-2018 IPR029039 Flavoprotein-like domain AM393_RS05865 86362d7b054746b4c487df8af50662e0 173 Gene3D G3DSA:3.40.50.360 1 75 2.6E-14 T 28-03-2018 IPR029039 Flavoprotein-like domain AM393_RS05865 86362d7b054746b4c487df8af50662e0 173 SUPERFAMILY SSF52218 1 168 3.73E-46 T 28-03-2018 IPR029039 Flavoprotein-like domain AM393_RS05865 86362d7b054746b4c487df8af50662e0 173 Pfam PF00258 Flavodoxin 5 160 1.1E-25 T 28-03-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 AM393_RS05865 86362d7b054746b4c487df8af50662e0 173 PIRSF PIRSF038996 1 171 7.2E-55 T 28-03-2018 IPR010086 Flavodoxin, long chain GO:0010181 AM393_RS05865 86362d7b054746b4c487df8af50662e0 173 TIGRFAM TIGR01752 flav_long: flavodoxin 2 168 5.9E-69 T 28-03-2018 IPR010086 Flavodoxin, long chain GO:0010181 AM393_RS05865 86362d7b054746b4c487df8af50662e0 173 ProSitePatterns PS00201 Flavodoxin signature. 5 21 - T 28-03-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 AM393_RS15365 fd0a3cc27dd7610785296ea2fa8dad62 161 Gene3D G3DSA:3.30.910.20 10 161 4.6E-20 T 28-03-2018 AM393_RS15365 fd0a3cc27dd7610785296ea2fa8dad62 161 SUPERFAMILY SSF111384 20 160 5.1E-32 T 28-03-2018 IPR024930 Skp domain AM393_RS15365 fd0a3cc27dd7610785296ea2fa8dad62 161 PIRSF PIRSF002094 1 161 4.0E-51 T 28-03-2018 IPR005632 Chaperone protein Skp GO:0051082 AM393_RS15365 fd0a3cc27dd7610785296ea2fa8dad62 161 SMART SM00935 10 161 5.1E-39 T 28-03-2018 IPR005632 Chaperone protein Skp GO:0051082 AM393_RS15365 fd0a3cc27dd7610785296ea2fa8dad62 161 Pfam PF03938 Outer membrane protein (OmpH-like) 8 159 3.0E-29 T 28-03-2018 IPR005632 Chaperone protein Skp GO:0051082 AM393_RS10645 55b863d325e4faa111a568a18534c738 168 Gene3D G3DSA:3.40.50.300 1 168 4.0E-30 T 28-03-2018 AM393_RS10645 55b863d325e4faa111a568a18534c738 168 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 5 139 3.8E-48 T 28-03-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 AM393_RS10645 55b863d325e4faa111a568a18534c738 168 SUPERFAMILY SSF52540 2 166 2.09E-24 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS10645 55b863d325e4faa111a568a18534c738 168 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 5 164 1.3E-50 T 28-03-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 AM393_RS11790 a07265c47862ace0b44fcc5431a67873 354 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 9 347 7.8E-138 T 28-03-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 AM393_RS11790 a07265c47862ace0b44fcc5431a67873 354 Gene3D G3DSA:3.20.20.210 1 354 2.0E-109 T 28-03-2018 AM393_RS11790 a07265c47862ace0b44fcc5431a67873 354 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 142 158 - T 28-03-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 AM393_RS11790 a07265c47862ace0b44fcc5431a67873 354 SUPERFAMILY SSF51726 1 353 1.34E-121 T 28-03-2018 AM393_RS11790 a07265c47862ace0b44fcc5431a67873 354 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 5 347 7.2E-142 T 28-03-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 AM393_RS11790 a07265c47862ace0b44fcc5431a67873 354 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 22 31 - T 28-03-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 AM393_RS11790 a07265c47862ace0b44fcc5431a67873 354 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 6 349 50.454 T 28-03-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 AM393_RS11505 0411ab6a34423d609e309480e9bacca9 270 SUPERFAMILY SSF53474 33 264 4.42E-48 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AM393_RS11505 0411ab6a34423d609e309480e9bacca9 270 Pfam PF01738 Dienelactone hydrolase family 42 265 3.0E-75 T 28-03-2018 IPR002925 Dienelactone hydrolase GO:0016787 AM393_RS11505 0411ab6a34423d609e309480e9bacca9 270 Gene3D G3DSA:3.40.50.1820 25 265 1.8E-44 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AM393_RS18575 beb1d1898e745eb352296a59bc65072a 682 Hamap MF_00285 Potassium-transporting ATPase ATP-binding subunit [kdpB]. 8 680 41.449 T 28-03-2018 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 AM393_RS18575 beb1d1898e745eb352296a59bc65072a 682 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 307 313 - T 28-03-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 AM393_RS18575 beb1d1898e745eb352296a59bc65072a 682 SUPERFAMILY SSF81653 117 207 3.53E-21 T 28-03-2018 IPR008250 P-type ATPase, A domain Reactome: R-HSA-936837 AM393_RS18575 beb1d1898e745eb352296a59bc65072a 682 SUPERFAMILY SSF81660 316 450 1.9E-37 T 28-03-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 AM393_RS18575 beb1d1898e745eb352296a59bc65072a 682 TIGRFAM TIGR01497 kdpB: K+-transporting ATPase, B subunit 2 677 0.0 T 28-03-2018 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 AM393_RS18575 beb1d1898e745eb352296a59bc65072a 682 Gene3D G3DSA:3.40.1110.10 316 442 7.9E-26 T 28-03-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 AM393_RS18575 beb1d1898e745eb352296a59bc65072a 682 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 372 604 1.5E-50 T 28-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AM393_RS18575 beb1d1898e745eb352296a59bc65072a 682 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 71 337 1.6E-37 T 28-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AM393_RS18575 beb1d1898e745eb352296a59bc65072a 682 Gene3D G3DSA:3.40.50.1000 443 577 2.7E-34 T 28-03-2018 IPR023214 HAD-like domain AM393_RS18575 beb1d1898e745eb352296a59bc65072a 682 Pfam PF00122 E1-E2 ATPase 114 282 1.0E-33 T 28-03-2018 AM393_RS18575 beb1d1898e745eb352296a59bc65072a 682 Pfam PF00702 haloacid dehalogenase-like hydrolase 301 530 2.5E-36 T 28-03-2018 AM393_RS18575 beb1d1898e745eb352296a59bc65072a 682 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 154 168 3.7E-24 T 28-03-2018 AM393_RS18575 beb1d1898e745eb352296a59bc65072a 682 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 539 551 3.7E-24 T 28-03-2018 AM393_RS18575 beb1d1898e745eb352296a59bc65072a 682 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 463 473 3.7E-24 T 28-03-2018 AM393_RS18575 beb1d1898e745eb352296a59bc65072a 682 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 305 319 3.7E-24 T 28-03-2018 AM393_RS18575 beb1d1898e745eb352296a59bc65072a 682 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 516 535 3.7E-24 T 28-03-2018 AM393_RS18575 beb1d1898e745eb352296a59bc65072a 682 SUPERFAMILY SSF56784 293 317 5.73E-39 T 28-03-2018 IPR023214 HAD-like domain AM393_RS18575 beb1d1898e745eb352296a59bc65072a 682 SUPERFAMILY SSF56784 377 404 5.73E-39 T 28-03-2018 IPR023214 HAD-like domain AM393_RS18575 beb1d1898e745eb352296a59bc65072a 682 SUPERFAMILY SSF56784 435 559 5.73E-39 T 28-03-2018 IPR023214 HAD-like domain AM393_RS18575 beb1d1898e745eb352296a59bc65072a 682 SUPERFAMILY SSF81665 619 662 1.31E-12 T 28-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 AM393_RS18575 beb1d1898e745eb352296a59bc65072a 682 SUPERFAMILY SSF81665 30 103 1.31E-12 T 28-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 AM393_RS18575 beb1d1898e745eb352296a59bc65072a 682 SUPERFAMILY SSF81665 208 299 1.31E-12 T 28-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 AM393_RS18575 beb1d1898e745eb352296a59bc65072a 682 Gene3D G3DSA:2.70.150.10 15 208 1.5E-23 T 28-03-2018 AM393_RS08360 48f898fd19e497f8717fd55a7ebc089b 704 Gene3D G3DSA:2.40.30.10 295 406 5.3E-30 T 28-03-2018 AM393_RS08360 48f898fd19e497f8717fd55a7ebc089b 704 SMART SM00838 611 698 1.1E-49 T 28-03-2018 IPR000640 Elongation factor EFG, domain V-like AM393_RS08360 48f898fd19e497f8717fd55a7ebc089b 704 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 28-03-2018 IPR031157 Tr-type G domain, conserved site AM393_RS08360 48f898fd19e497f8717fd55a7ebc089b 704 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 703 0.0 T 28-03-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AM393_RS08360 48f898fd19e497f8717fd55a7ebc089b 704 Pfam PF00679 Elongation factor G C-terminus 611 696 2.8E-28 T 28-03-2018 IPR000640 Elongation factor EFG, domain V-like AM393_RS08360 48f898fd19e497f8717fd55a7ebc089b 704 Pfam PF14492 Elongation Factor G, domain II 411 485 1.1E-33 T 28-03-2018 AM393_RS08360 48f898fd19e497f8717fd55a7ebc089b 704 SUPERFAMILY SSF52540 6 288 9.81E-107 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS08360 48f898fd19e497f8717fd55a7ebc089b 704 SUPERFAMILY SSF54211 486 610 1.62E-39 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM393_RS08360 48f898fd19e497f8717fd55a7ebc089b 704 Pfam PF00009 Elongation factor Tu GTP binding domain 9 288 3.7E-67 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM393_RS08360 48f898fd19e497f8717fd55a7ebc089b 704 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 10 187 8.0E-33 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AM393_RS08360 48f898fd19e497f8717fd55a7ebc089b 704 Pfam PF03764 Elongation factor G, domain IV 486 609 3.3E-44 T 28-03-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 AM393_RS08360 48f898fd19e497f8717fd55a7ebc089b 704 Gene3D G3DSA:3.30.70.240 625 702 5.8E-29 T 28-03-2018 AM393_RS08360 48f898fd19e497f8717fd55a7ebc089b 704 Gene3D G3DSA:3.30.230.10 501 624 3.2E-39 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AM393_RS08360 48f898fd19e497f8717fd55a7ebc089b 704 PRINTS PR00315 GTP-binding elongation factor signature 85 95 1.7E-16 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM393_RS08360 48f898fd19e497f8717fd55a7ebc089b 704 PRINTS PR00315 GTP-binding elongation factor signature 137 146 1.7E-16 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM393_RS08360 48f898fd19e497f8717fd55a7ebc089b 704 PRINTS PR00315 GTP-binding elongation factor signature 101 112 1.7E-16 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM393_RS08360 48f898fd19e497f8717fd55a7ebc089b 704 PRINTS PR00315 GTP-binding elongation factor signature 12 25 1.7E-16 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM393_RS08360 48f898fd19e497f8717fd55a7ebc089b 704 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.7E-16 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM393_RS08360 48f898fd19e497f8717fd55a7ebc089b 704 SUPERFAMILY SSF54980 611 700 7.19E-27 T 28-03-2018 IPR035647 EF-G domain III/V-like AM393_RS08360 48f898fd19e497f8717fd55a7ebc089b 704 SUPERFAMILY SSF50447 271 411 3.76E-35 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain AM393_RS08360 48f898fd19e497f8717fd55a7ebc089b 704 SUPERFAMILY SSF54980 411 488 3.02E-25 T 28-03-2018 IPR035647 EF-G domain III/V-like AM393_RS08360 48f898fd19e497f8717fd55a7ebc089b 704 Gene3D G3DSA:3.40.50.300 1 293 9.1E-59 T 28-03-2018 AM393_RS08360 48f898fd19e497f8717fd55a7ebc089b 704 Pfam PF03144 Elongation factor Tu domain 2 331 398 5.2E-16 T 28-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AM393_RS08360 48f898fd19e497f8717fd55a7ebc089b 704 Gene3D G3DSA:3.30.70.870 407 500 2.4E-36 T 28-03-2018 AM393_RS08360 48f898fd19e497f8717fd55a7ebc089b 704 SMART SM00889 487 609 1.6E-70 T 28-03-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 AM393_RS08360 48f898fd19e497f8717fd55a7ebc089b 704 Hamap MF_00054_B Elongation factor G [fusA]. 6 702 112.077 T 28-03-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AM393_RS24520 75ac629a964d19140e423abe53a0d406 330 Pfam PF00561 alpha/beta hydrolase fold 59 186 5.2E-18 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM393_RS24520 75ac629a964d19140e423abe53a0d406 330 SUPERFAMILY SSF53474 39 326 1.02E-55 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AM393_RS24520 75ac629a964d19140e423abe53a0d406 330 PRINTS PR00412 Epoxide hydrolase signature 146 159 1.5E-12 T 28-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AM393_RS24520 75ac629a964d19140e423abe53a0d406 330 PRINTS PR00412 Epoxide hydrolase signature 132 145 1.5E-12 T 28-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AM393_RS24520 75ac629a964d19140e423abe53a0d406 330 PRINTS PR00412 Epoxide hydrolase signature 305 327 1.5E-12 T 28-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AM393_RS24520 75ac629a964d19140e423abe53a0d406 330 PRINTS PR00412 Epoxide hydrolase signature 64 82 1.5E-12 T 28-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AM393_RS24520 75ac629a964d19140e423abe53a0d406 330 PRINTS PR00412 Epoxide hydrolase signature 84 99 1.5E-12 T 28-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AM393_RS24520 75ac629a964d19140e423abe53a0d406 330 Gene3D G3DSA:3.40.50.1820 36 327 1.7E-35 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AM393_RS01160 c5736792a5da47686166d743308d5187 549 Gene3D G3DSA:3.40.50.300 2 48 1.3E-8 T 28-03-2018 AM393_RS01160 c5736792a5da47686166d743308d5187 549 Gene3D G3DSA:3.40.50.300 49 161 2.0E-10 T 28-03-2018 AM393_RS01160 c5736792a5da47686166d743308d5187 549 SUPERFAMILY SSF52540 5 141 8.94E-19 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS01160 c5736792a5da47686166d743308d5187 549 Pfam PF02421 Ferrous iron transport protein B 4 143 1.0E-12 T 28-03-2018 IPR030389 FeoB-type guanine nucleotide-binding (G) domain GO:0005525 AM393_RS02285 fabc6034e71c2aea7c9f677dbd4b0301 189 Pfam PF00877 NlpC/P60 family 80 184 9.4E-34 T 28-03-2018 IPR000064 Endopeptidase, NLPC/P60 domain AM393_RS02285 fabc6034e71c2aea7c9f677dbd4b0301 189 SUPERFAMILY SSF54001 68 186 1.11E-39 T 28-03-2018 AM393_RS02285 fabc6034e71c2aea7c9f677dbd4b0301 189 Gene3D G3DSA:3.90.1720.10 64 189 1.1E-39 T 28-03-2018 AM393_RS15800 f1991f3574b12efaaf0a45d4f9eeea81 777 Gene3D G3DSA:1.10.10.10 672 768 1.0E-38 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS15800 f1991f3574b12efaaf0a45d4f9eeea81 777 Pfam PF08706 D5 N terminal like 339 467 5.7E-8 T 28-03-2018 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal AM393_RS15800 f1991f3574b12efaaf0a45d4f9eeea81 777 SUPERFAMILY SSF57783 15 93 4.68E-9 T 28-03-2018 AM393_RS15800 f1991f3574b12efaaf0a45d4f9eeea81 777 SMART SM00885 336 463 1.1E-22 T 28-03-2018 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal AM393_RS15800 f1991f3574b12efaaf0a45d4f9eeea81 777 Pfam PF08273 Zinc-binding domain of primase-helicase 31 66 1.6E-18 T 28-03-2018 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal GO:0003896|GO:0004386|GO:0008270 AM393_RS15800 f1991f3574b12efaaf0a45d4f9eeea81 777 SMART SM00778 30 66 5.7E-20 T 28-03-2018 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal GO:0003896|GO:0004386|GO:0008270 AM393_RS15800 f1991f3574b12efaaf0a45d4f9eeea81 777 Gene3D G3DSA:3.40.50.300 450 648 3.0E-13 T 28-03-2018 AM393_RS15800 f1991f3574b12efaaf0a45d4f9eeea81 777 SUPERFAMILY SSF52540 431 620 4.61E-18 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS15800 f1991f3574b12efaaf0a45d4f9eeea81 777 Gene3D G3DSA:3.40.1360.10 196 314 1.0E-14 T 28-03-2018 AM393_RS15800 f1991f3574b12efaaf0a45d4f9eeea81 777 Pfam PF03288 Poxvirus D5 protein-like 670 769 7.8E-21 T 28-03-2018 IPR004968 DNA primase/nucleoside triphosphatase, C-terminal AM393_RS15800 f1991f3574b12efaaf0a45d4f9eeea81 777 SUPERFAMILY SSF46785 671 769 1.01E-39 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS15800 f1991f3574b12efaaf0a45d4f9eeea81 777 Pfam PF13362 Toprim domain 210 300 3.3E-11 T 28-03-2018 IPR006171 TOPRIM domain AM393_RS15800 f1991f3574b12efaaf0a45d4f9eeea81 777 Gene3D G3DSA:3.90.580.10 7 94 6.4E-11 T 28-03-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 AM393_RS15800 f1991f3574b12efaaf0a45d4f9eeea81 777 SMART SM00493 208 283 2.7E-5 T 28-03-2018 IPR006171 TOPRIM domain AM393_RS06925 f38378109fca3e08ee94540b845ea754 337 Gene3D G3DSA:3.30.420.40 1 144 4.1E-43 T 28-03-2018 AM393_RS06925 f38378109fca3e08ee94540b845ea754 337 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 4 306 6.4E-130 T 28-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AM393_RS06925 f38378109fca3e08ee94540b845ea754 337 ProSitePatterns PS01016 Glycoprotease family signature. 96 116 - T 28-03-2018 IPR017860 Peptidase M22, conserved site KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618|Reactome: R-HSA-6782315 AM393_RS06925 f38378109fca3e08ee94540b845ea754 337 SUPERFAMILY SSF53067 1 309 2.07E-44 T 28-03-2018 AM393_RS06925 f38378109fca3e08ee94540b845ea754 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 263 272 5.5E-53 T 28-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AM393_RS06925 f38378109fca3e08ee94540b845ea754 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 76 96 5.5E-53 T 28-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AM393_RS06925 f38378109fca3e08ee94540b845ea754 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 5.5E-53 T 28-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AM393_RS06925 f38378109fca3e08ee94540b845ea754 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 97 116 5.5E-53 T 28-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AM393_RS06925 f38378109fca3e08ee94540b845ea754 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 131 143 5.5E-53 T 28-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AM393_RS06925 f38378109fca3e08ee94540b845ea754 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 154 175 5.5E-53 T 28-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AM393_RS06925 f38378109fca3e08ee94540b845ea754 337 Pfam PF00814 Glycoprotease family 24 307 1.4E-103 T 28-03-2018 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AM393_RS06925 f38378109fca3e08ee94540b845ea754 337 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 313 3.4E-137 T 28-03-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AM393_RS06925 f38378109fca3e08ee94540b845ea754 337 Gene3D G3DSA:3.30.420.40 145 289 1.1E-18 T 28-03-2018 AM393_RS06925 f38378109fca3e08ee94540b845ea754 337 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 331 64.047 T 28-03-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AM393_RS10530 4d7a3bf35abb9cabb89e169fcfd8d474 271 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 38 266 1.3E-43 T 28-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM393_RS10530 4d7a3bf35abb9cabb89e169fcfd8d474 271 Hamap MF_01393 ATP synthase subunit a [atpB]. 12 271 16.184 T 28-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM393_RS10530 4d7a3bf35abb9cabb89e169fcfd8d474 271 ProSitePatterns PS00449 ATP synthase a subunit signature. 206 215 - T 28-03-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM393_RS10530 4d7a3bf35abb9cabb89e169fcfd8d474 271 SUPERFAMILY SSF81336 95 265 2.88E-49 T 28-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM393_RS10530 4d7a3bf35abb9cabb89e169fcfd8d474 271 Pfam PF00119 ATP synthase A chain 46 265 4.6E-56 T 28-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM393_RS10530 4d7a3bf35abb9cabb89e169fcfd8d474 271 Gene3D G3DSA:1.20.120.220 95 271 1.3E-53 T 28-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM393_RS10530 4d7a3bf35abb9cabb89e169fcfd8d474 271 PRINTS PR00123 ATP synthase A subunit signature 203 225 4.6E-15 T 28-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM393_RS10530 4d7a3bf35abb9cabb89e169fcfd8d474 271 PRINTS PR00123 ATP synthase A subunit signature 251 266 4.6E-15 T 28-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM393_RS10530 4d7a3bf35abb9cabb89e169fcfd8d474 271 PRINTS PR00123 ATP synthase A subunit signature 104 120 4.6E-15 T 28-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM393_RS16435 4709b3707478cba3994faa102d09b37d 663 Gene3D G3DSA:1.10.287.70 573 640 1.3E-17 T 28-03-2018 AM393_RS16435 4709b3707478cba3994faa102d09b37d 663 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 280 334 - T 28-03-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM393_RS16435 4709b3707478cba3994faa102d09b37d 663 TIGRFAM TIGR02843 CyoB: cytochrome o ubiquinol oxidase, subunit I 2 647 0.0 T 28-03-2018 IPR014207 Cytochrome o ubiquinol oxidase, subunit I GO:0016682|GO:0055114 MetaCyc: PWY-7544 AM393_RS16435 4709b3707478cba3994faa102d09b37d 663 Gene3D G3DSA:1.20.210.10 43 561 1.6E-185 T 28-03-2018 IPR023616 Cytochrome c oxidase-like, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM393_RS16435 4709b3707478cba3994faa102d09b37d 663 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 56 503 9.5E-135 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM393_RS16435 4709b3707478cba3994faa102d09b37d 663 SUPERFAMILY SSF81442 43 559 2.49E-179 T 28-03-2018 IPR023616 Cytochrome c oxidase-like, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM393_RS16435 4709b3707478cba3994faa102d09b37d 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 227 246 9.2E-94 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM393_RS16435 4709b3707478cba3994faa102d09b37d 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 124 148 9.2E-94 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM393_RS16435 4709b3707478cba3994faa102d09b37d 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 383 401 9.2E-94 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM393_RS16435 4709b3707478cba3994faa102d09b37d 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 198 216 9.2E-94 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM393_RS16435 4709b3707478cba3994faa102d09b37d 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 47 72 9.2E-94 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM393_RS16435 4709b3707478cba3994faa102d09b37d 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 97 120 9.2E-94 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM393_RS16435 4709b3707478cba3994faa102d09b37d 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 278 299 9.2E-94 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM393_RS16435 4709b3707478cba3994faa102d09b37d 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 411 430 9.2E-94 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM393_RS16435 4709b3707478cba3994faa102d09b37d 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 166 178 9.2E-94 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM393_RS16435 4709b3707478cba3994faa102d09b37d 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 324 339 9.2E-94 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM393_RS16435 4709b3707478cba3994faa102d09b37d 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 461 482 9.2E-94 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM393_RS16435 4709b3707478cba3994faa102d09b37d 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 348 369 9.2E-94 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM393_RS07460 6413a3917e3d35d2d145bcbfadd9d886 294 PIRSF PIRSF004654 1 292 1.9E-119 T 28-03-2018 IPR023605 Lipoprotein NlpI AM393_RS07460 6413a3917e3d35d2d145bcbfadd9d886 294 SMART SM00028 234 267 21.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AM393_RS07460 6413a3917e3d35d2d145bcbfadd9d886 294 SMART SM00028 62 95 0.0033 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AM393_RS07460 6413a3917e3d35d2d145bcbfadd9d886 294 SMART SM00028 96 129 2.0E-4 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AM393_RS07460 6413a3917e3d35d2d145bcbfadd9d886 294 Gene3D G3DSA:1.25.40.10 20 294 1.8E-50 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM393_RS07460 6413a3917e3d35d2d145bcbfadd9d886 294 Pfam PF13181 Tetratricopeptide repeat 62 94 0.033 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AM393_RS07460 6413a3917e3d35d2d145bcbfadd9d886 294 Pfam PF07719 Tetratricopeptide repeat 96 129 5.3E-5 T 28-03-2018 IPR013105 Tetratricopeptide repeat 2 AM393_RS07460 6413a3917e3d35d2d145bcbfadd9d886 294 SUPERFAMILY SSF48452 27 283 4.07E-76 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM393_RS20490 422fbb530f53f71572175e0cdb0ff1cb 144 Pfam PF12098 Protein of unknown function (DUF3574) 43 144 5.4E-41 T 28-03-2018 IPR021957 Protein of unknown function DUF3574 AM393_RS15830 87479e6b933848bf7dd358b1f85e567c 81 Pfam PF04606 Ogr/Delta-like zinc finger 3 49 1.5E-19 T 28-03-2018 IPR007684 Zinc finger, Ogr/Delta-type AM393_RS21640 6061f4c251466082d9e06d6343a659bd 520 Gene3D G3DSA:3.60.120.10 1 520 2.2E-159 T 28-03-2018 IPR005801 ADC synthase GO:0009058 AM393_RS21640 6061f4c251466082d9e06d6343a659bd 520 TIGRFAM TIGR00565 trpE_proteo: anthranilate synthase component I 17 515 4.0E-257 T 28-03-2018 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AM393_RS21640 6061f4c251466082d9e06d6343a659bd 520 Pfam PF00425 chorismate binding enzyme 242 502 2.6E-83 T 28-03-2018 IPR015890 Chorismate-utilising enzyme, C-terminal AM393_RS21640 6061f4c251466082d9e06d6343a659bd 520 PRINTS PR00095 Anthranilate synthase component I signature 350 363 5.1E-24 T 28-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AM393_RS21640 6061f4c251466082d9e06d6343a659bd 520 PRINTS PR00095 Anthranilate synthase component I signature 364 377 5.1E-24 T 28-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AM393_RS21640 6061f4c251466082d9e06d6343a659bd 520 PRINTS PR00095 Anthranilate synthase component I signature 459 473 5.1E-24 T 28-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AM393_RS21640 6061f4c251466082d9e06d6343a659bd 520 PRINTS PR00095 Anthranilate synthase component I signature 444 458 5.1E-24 T 28-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AM393_RS21640 6061f4c251466082d9e06d6343a659bd 520 SUPERFAMILY SSF56322 9 515 6.41E-163 T 28-03-2018 IPR005801 ADC synthase GO:0009058 AM393_RS21640 6061f4c251466082d9e06d6343a659bd 520 PIRSF PIRSF001373 1 520 1.6E-248 T 28-03-2018 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AM393_RS21640 6061f4c251466082d9e06d6343a659bd 520 Pfam PF04715 Anthranilate synthase component I, N terminal region 19 191 1.7E-13 T 28-03-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AM393_RS05570 75f3ad48df69384312fa03e2d5156bdb 231 SUPERFAMILY SSF56935 46 231 1.13E-13 T 28-03-2018 AM393_RS05570 75f3ad48df69384312fa03e2d5156bdb 231 Gene3D G3DSA:2.40.160.40 22 231 1.6E-32 T 28-03-2018 AM393_RS05570 75f3ad48df69384312fa03e2d5156bdb 231 Pfam PF06178 Oligogalacturonate-specific porin protein (KdgM) 15 231 8.2E-61 T 28-03-2018 IPR009331 Oligogalacturonate-specific porin AM393_RS12320 3011060070b5ad61a08e9696f41adb83 652 Gene3D G3DSA:3.40.50.980 267 433 1.8E-38 T 28-03-2018 AM393_RS12320 3011060070b5ad61a08e9696f41adb83 652 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 20 643 0.0 T 28-03-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 AM393_RS12320 3011060070b5ad61a08e9696f41adb83 652 Pfam PF13193 AMP-binding enzyme C-terminal domain 531 609 2.0E-26 T 28-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain AM393_RS12320 3011060070b5ad61a08e9696f41adb83 652 Gene3D G3DSA:3.30.300.30 518 650 4.4E-28 T 28-03-2018 AM393_RS12320 3011060070b5ad61a08e9696f41adb83 652 SUPERFAMILY SSF56801 10 643 1.14E-191 T 28-03-2018 AM393_RS12320 3011060070b5ad61a08e9696f41adb83 652 Gene3D G3DSA:2.30.38.10 436 516 3.4E-11 T 28-03-2018 AM393_RS12320 3011060070b5ad61a08e9696f41adb83 652 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 24 81 3.2E-19 T 28-03-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 AM393_RS12320 3011060070b5ad61a08e9696f41adb83 652 Pfam PF00501 AMP-binding enzyme 83 522 1.0E-93 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AM393_RS12320 3011060070b5ad61a08e9696f41adb83 652 Gene3D G3DSA:3.40.50.980 74 266 4.3E-54 T 28-03-2018 AM393_RS12320 3011060070b5ad61a08e9696f41adb83 652 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 2 645 52.956 T 28-03-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 AM393_RS12320 3011060070b5ad61a08e9696f41adb83 652 ProSitePatterns PS00455 Putative AMP-binding domain signature. 261 272 - T 28-03-2018 IPR020845 AMP-binding, conserved site AM393_RS06000 fa00ffc6521f9ddb596447f01f930b81 211 Hamap MF_01901 Arginine exporter protein ArgO [argO]. 1 205 39.83 T 28-03-2018 IPR023445 Arginine exporter protein ArgO, enterobacteria GO:0015181|GO:0015809 AM393_RS06000 fa00ffc6521f9ddb596447f01f930b81 211 TIGRFAM TIGR00948 2a75: L-lysine exporter 15 191 1.1E-70 T 28-03-2018 IPR004777 L-lysine exporter/arginine exporter GO:0016021 AM393_RS06000 fa00ffc6521f9ddb596447f01f930b81 211 Pfam PF01810 LysE type translocator 14 201 8.8E-55 T 28-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AM393_RS01095 0419457f931fca7a2a98dd479bc245b3 652 SUPERFAMILY SSF55681 254 538 1.35E-93 T 28-03-2018 AM393_RS01095 0419457f931fca7a2a98dd479bc245b3 652 SUPERFAMILY SSF81271 16 73 5.67E-11 T 28-03-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 AM393_RS01095 0419457f931fca7a2a98dd479bc245b3 652 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 78 646 31.096 T 28-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AM393_RS01095 0419457f931fca7a2a98dd479bc245b3 652 SUPERFAMILY SSF52954 541 641 4.38E-26 T 28-03-2018 IPR004154 Anticodon-binding AM393_RS01095 0419457f931fca7a2a98dd479bc245b3 652 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 87 641 2.4E-199 T 28-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AM393_RS01095 0419457f931fca7a2a98dd479bc245b3 652 Pfam PF02824 TGS domain 16 73 2.6E-9 T 28-03-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 AM393_RS01095 0419457f931fca7a2a98dd479bc245b3 652 Gene3D G3DSA:3.10.20.30 11 74 6.6E-12 T 28-03-2018 IPR012675 Beta-grasp domain AM393_RS01095 0419457f931fca7a2a98dd479bc245b3 652 Gene3D G3DSA:3.30.980.10 172 233 5.6E-10 T 28-03-2018 AM393_RS01095 0419457f931fca7a2a98dd479bc245b3 652 Gene3D G3DSA:3.30.980.10 77 171 6.9E-15 T 28-03-2018 AM393_RS01095 0419457f931fca7a2a98dd479bc245b3 652 SMART SM00863 181 230 1.8E-8 T 28-03-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 AM393_RS01095 0419457f931fca7a2a98dd479bc245b3 652 PRINTS PR01047 Threonyl-tRNA synthetase signature 341 369 1.5E-51 T 28-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AM393_RS01095 0419457f931fca7a2a98dd479bc245b3 652 PRINTS PR01047 Threonyl-tRNA synthetase signature 374 397 1.5E-51 T 28-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AM393_RS01095 0419457f931fca7a2a98dd479bc245b3 652 PRINTS PR01047 Threonyl-tRNA synthetase signature 546 558 1.5E-51 T 28-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AM393_RS01095 0419457f931fca7a2a98dd479bc245b3 652 PRINTS PR01047 Threonyl-tRNA synthetase signature 476 504 1.5E-51 T 28-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AM393_RS01095 0419457f931fca7a2a98dd479bc245b3 652 PRINTS PR01047 Threonyl-tRNA synthetase signature 519 532 1.5E-51 T 28-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AM393_RS01095 0419457f931fca7a2a98dd479bc245b3 652 Gene3D G3DSA:3.30.930.10 234 543 4.4E-114 T 28-03-2018 AM393_RS01095 0419457f931fca7a2a98dd479bc245b3 652 SUPERFAMILY SSF55186 77 252 8.5E-42 T 28-03-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 AM393_RS01095 0419457f931fca7a2a98dd479bc245b3 652 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 329 541 6.4E-41 T 28-03-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM393_RS01095 0419457f931fca7a2a98dd479bc245b3 652 Gene3D G3DSA:3.40.50.800 544 645 1.3E-23 T 28-03-2018 IPR004154 Anticodon-binding AM393_RS01095 0419457f931fca7a2a98dd479bc245b3 652 Pfam PF03129 Anticodon binding domain 553 641 4.7E-17 T 28-03-2018 IPR004154 Anticodon-binding AM393_RS00145 4eb9a07229386d365c526daad0b20143 547 Hamap MF_00453 Phosphoenolpyruvate carboxykinase (ATP) [pckA]. 16 538 53.043 T 28-03-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 AM393_RS00145 4eb9a07229386d365c526daad0b20143 547 PIRSF PIRSF006294 2 540 3.1E-221 T 28-03-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 AM393_RS00145 4eb9a07229386d365c526daad0b20143 547 ProSitePatterns PS00532 Phosphoenolpyruvate carboxykinase (ATP) signature. 265 280 - T 28-03-2018 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 AM393_RS00145 4eb9a07229386d365c526daad0b20143 547 SUPERFAMILY SSF68923 9 227 1.92E-84 T 28-03-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 AM393_RS00145 4eb9a07229386d365c526daad0b20143 547 Pfam PF01293 Phosphoenolpyruvate carboxykinase 23 491 7.7E-201 T 28-03-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 AM393_RS00145 4eb9a07229386d365c526daad0b20143 547 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 8 540 3.7E-253 T 28-03-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 AM393_RS00145 4eb9a07229386d365c526daad0b20143 547 Gene3D G3DSA:3.40.449.10 23 227 2.6E-73 T 28-03-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 AM393_RS00145 4eb9a07229386d365c526daad0b20143 547 Gene3D G3DSA:3.90.228.20 308 538 5.5E-85 T 28-03-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 AM393_RS00145 4eb9a07229386d365c526daad0b20143 547 Gene3D G3DSA:3.90.228.20 228 307 2.7E-28 T 28-03-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 AM393_RS00145 4eb9a07229386d365c526daad0b20143 547 SUPERFAMILY SSF53795 229 540 2.52E-122 T 28-03-2018 AM393_RS25315 63e183ea8c890be4d7bc736b070a77fa 307 Gene3D G3DSA:3.40.190.10 97 187 4.8E-19 T 28-03-2018 AM393_RS25315 63e183ea8c890be4d7bc736b070a77fa 307 Pfam PF03466 LysR substrate binding domain 102 305 4.2E-34 T 28-03-2018 IPR005119 LysR, substrate-binding AM393_RS25315 63e183ea8c890be4d7bc736b070a77fa 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 28 39 1.3E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS25315 63e183ea8c890be4d7bc736b070a77fa 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 49 1.3E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS25315 63e183ea8c890be4d7bc736b070a77fa 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 49 60 1.3E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS25315 63e183ea8c890be4d7bc736b070a77fa 307 SUPERFAMILY SSF53850 102 305 1.16E-33 T 28-03-2018 AM393_RS25315 63e183ea8c890be4d7bc736b070a77fa 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 72 1.5E-18 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS25315 63e183ea8c890be4d7bc736b070a77fa 307 Gene3D G3DSA:1.10.10.10 6 93 9.1E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS25315 63e183ea8c890be4d7bc736b070a77fa 307 Gene3D G3DSA:3.40.190.10 188 275 3.3E-12 T 28-03-2018 AM393_RS25315 63e183ea8c890be4d7bc736b070a77fa 307 SUPERFAMILY SSF46785 10 121 3.71E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS21725 0895517001e65b4d95ca1435dd1c975d 200 SUPERFAMILY SSF142695 3 173 6.15E-67 T 28-03-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 AM393_RS21725 0895517001e65b4d95ca1435dd1c975d 200 Pfam PF00925 GTP cyclohydrolase II 5 170 9.0E-68 T 28-03-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 AM393_RS21725 0895517001e65b4d95ca1435dd1c975d 200 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 5 194 2.9E-93 T 28-03-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 AM393_RS21725 0895517001e65b4d95ca1435dd1c975d 200 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 1 196 48.526 T 28-03-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 AM393_RS25140 2c772997db9b95c65bfcace121967ab7 477 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 251 258 - T 28-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 AM393_RS25140 2c772997db9b95c65bfcace121967ab7 477 Pfam PF00171 Aldehyde dehydrogenase family 13 466 1.4E-136 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AM393_RS25140 2c772997db9b95c65bfcace121967ab7 477 SUPERFAMILY SSF53720 2 472 6.54E-141 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AM393_RS25140 2c772997db9b95c65bfcace121967ab7 477 Gene3D G3DSA:3.40.605.10 1 269 2.1E-78 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AM393_RS25140 2c772997db9b95c65bfcace121967ab7 477 Gene3D G3DSA:3.40.309.10 270 450 7.2E-60 T 28-03-2018 AM393_RS21195 a5005b25e8d4f92c2644d4d127588098 421 Pfam PF11798 IMS family HHH motif 169 199 5.2E-7 T 28-03-2018 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 AM393_RS21195 a5005b25e8d4f92c2644d4d127588098 421 Gene3D G3DSA:3.30.70.270 37 114 2.9E-15 T 28-03-2018 AM393_RS21195 a5005b25e8d4f92c2644d4d127588098 421 Gene3D G3DSA:3.30.70.270 115 172 3.3E-11 T 28-03-2018 AM393_RS21195 a5005b25e8d4f92c2644d4d127588098 421 Gene3D G3DSA:1.10.150.20 173 248 1.5E-14 T 28-03-2018 AM393_RS21195 a5005b25e8d4f92c2644d4d127588098 421 Pfam PF00817 impB/mucB/samB family 6 149 8.0E-33 T 28-03-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AM393_RS21195 a5005b25e8d4f92c2644d4d127588098 421 SUPERFAMILY SSF100879 249 345 4.19E-6 T 28-03-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AM393_RS21195 a5005b25e8d4f92c2644d4d127588098 421 Gene3D G3DSA:3.30.1490.100 249 362 8.5E-25 T 28-03-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AM393_RS21195 a5005b25e8d4f92c2644d4d127588098 421 Pfam PF11799 impB/mucB/samB family C-terminal domain 242 350 6.9E-14 T 28-03-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AM393_RS21195 a5005b25e8d4f92c2644d4d127588098 421 Pfam PF13438 Domain of unknown function (DUF4113) 371 420 1.8E-22 T 28-03-2018 IPR025188 Domain of unknown function DUF4113 AM393_RS21195 a5005b25e8d4f92c2644d4d127588098 421 SUPERFAMILY SSF56672 1 236 1.16E-64 T 28-03-2018 AM393_RS09735 84fd3bed1a7c88ce0d976aed65f33063 379 Gene3D G3DSA:3.40.1710.10 46 198 3.2E-23 T 28-03-2018 AM393_RS09735 84fd3bed1a7c88ce0d976aed65f33063 379 Pfam PF12698 ABC-2 family transporter protein 28 370 1.7E-41 T 28-03-2018 AM393_RS09375 448e74e7df180e6fe1e8f33d44a1f149 96 Gene3D G3DSA:1.10.260.40 21 87 5.5E-9 T 28-03-2018 AM393_RS09375 448e74e7df180e6fe1e8f33d44a1f149 96 SUPERFAMILY SSF47413 39 82 5.07E-7 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM393_RS09375 448e74e7df180e6fe1e8f33d44a1f149 96 SMART SM00530 37 91 0.001 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM393_RS09375 448e74e7df180e6fe1e8f33d44a1f149 96 Pfam PF01381 Helix-turn-helix 39 80 1.8E-5 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM393_RS03105 7bd6c4cf7fc66c1999964d1e1cbf62c6 671 Gene3D G3DSA:2.40.50.140 322 390 3.5E-34 T 28-03-2018 AM393_RS03105 7bd6c4cf7fc66c1999964d1e1cbf62c6 671 SMART SM00292 595 670 9.1E-12 T 28-03-2018 IPR001357 BRCT domain AM393_RS03105 7bd6c4cf7fc66c1999964d1e1cbf62c6 671 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 4 318 1.3E-141 T 28-03-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 AM393_RS03105 7bd6c4cf7fc66c1999964d1e1cbf62c6 671 Gene3D G3DSA:1.10.150.20 506 571 1.0E-26 T 28-03-2018 AM393_RS03105 7bd6c4cf7fc66c1999964d1e1cbf62c6 671 Gene3D G3DSA:3.40.50.10190 572 671 8.8E-25 T 28-03-2018 IPR001357 BRCT domain AM393_RS03105 7bd6c4cf7fc66c1999964d1e1cbf62c6 671 Hamap MF_01588 DNA ligase [ligA]. 2 669 54.402 T 28-03-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 AM393_RS03105 7bd6c4cf7fc66c1999964d1e1cbf62c6 671 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 322 398 2.1E-35 T 28-03-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 AM393_RS03105 7bd6c4cf7fc66c1999964d1e1cbf62c6 671 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 596 668 1.5E-12 T 28-03-2018 IPR001357 BRCT domain AM393_RS03105 7bd6c4cf7fc66c1999964d1e1cbf62c6 671 SMART SM00532 3 448 6.1E-294 T 28-03-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 AM393_RS03105 7bd6c4cf7fc66c1999964d1e1cbf62c6 671 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 331 346 - T 28-03-2018 IPR033136 NAD-dependent DNA ligase, conserved site AM393_RS03105 7bd6c4cf7fc66c1999964d1e1cbf62c6 671 PIRSF PIRSF001604 1 671 1.5E-254 T 28-03-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 AM393_RS03105 7bd6c4cf7fc66c1999964d1e1cbf62c6 671 Pfam PF12826 Helix-hairpin-helix motif 510 573 3.2E-22 T 28-03-2018 AM393_RS03105 7bd6c4cf7fc66c1999964d1e1cbf62c6 671 Pfam PF14520 Helix-hairpin-helix domain 446 502 1.5E-5 T 28-03-2018 AM393_RS03105 7bd6c4cf7fc66c1999964d1e1cbf62c6 671 SUPERFAMILY SSF52113 596 669 1.13E-18 T 28-03-2018 IPR001357 BRCT domain AM393_RS03105 7bd6c4cf7fc66c1999964d1e1cbf62c6 671 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 115 144 - T 28-03-2018 IPR018239 NAD-dependent DNA ligase, active site AM393_RS03105 7bd6c4cf7fc66c1999964d1e1cbf62c6 671 SUPERFAMILY SSF47781 403 583 2.11E-60 T 28-03-2018 IPR010994 RuvA domain 2-like AM393_RS03105 7bd6c4cf7fc66c1999964d1e1cbf62c6 671 SMART SM00278 446 465 67.0 T 28-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AM393_RS03105 7bd6c4cf7fc66c1999964d1e1cbf62c6 671 SMART SM00278 480 499 1.3 T 28-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AM393_RS03105 7bd6c4cf7fc66c1999964d1e1cbf62c6 671 SMART SM00278 512 531 550.0 T 28-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AM393_RS03105 7bd6c4cf7fc66c1999964d1e1cbf62c6 671 SMART SM00278 544 563 280.0 T 28-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AM393_RS03105 7bd6c4cf7fc66c1999964d1e1cbf62c6 671 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 11 665 1.6E-276 T 28-03-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 AM393_RS03105 7bd6c4cf7fc66c1999964d1e1cbf62c6 671 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 407 434 4.8E-10 T 28-03-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 AM393_RS03105 7bd6c4cf7fc66c1999964d1e1cbf62c6 671 Gene3D G3DSA:1.10.150.20 432 505 8.4E-26 T 28-03-2018 AM393_RS03105 7bd6c4cf7fc66c1999964d1e1cbf62c6 671 SUPERFAMILY SSF50249 318 399 2.74E-28 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM393_RS03105 7bd6c4cf7fc66c1999964d1e1cbf62c6 671 SUPERFAMILY SSF56091 2 316 1.49E-124 T 28-03-2018 AM393_RS03105 7bd6c4cf7fc66c1999964d1e1cbf62c6 671 Gene3D G3DSA:3.30.1490.70 241 321 1.2E-23 T 28-03-2018 AM393_RS03105 7bd6c4cf7fc66c1999964d1e1cbf62c6 671 Gene3D G3DSA:1.10.287.610 1 67 5.7E-26 T 28-03-2018 AM393_RS03105 7bd6c4cf7fc66c1999964d1e1cbf62c6 671 Gene3D G3DSA:3.30.470.30 119 240 6.1E-54 T 28-03-2018 AM393_RS11205 1eb5f633a37038fce4e1b2cd7b072183 309 Gene3D G3DSA:3.30.470.10 1 142 7.9E-44 T 28-03-2018 AM393_RS11205 1eb5f633a37038fce4e1b2cd7b072183 309 ProSitePatterns PS00770 Aminotransferases class-IV signature. 194 223 - T 28-03-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: R-HSA-70895 AM393_RS11205 1eb5f633a37038fce4e1b2cd7b072183 309 Pfam PF01063 Amino-transferase class IV 36 268 6.4E-50 T 28-03-2018 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 AM393_RS11205 1eb5f633a37038fce4e1b2cd7b072183 309 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 10 307 2.9E-146 T 28-03-2018 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767 AM393_RS11205 1eb5f633a37038fce4e1b2cd7b072183 309 Gene3D G3DSA:3.20.10.10 143 303 3.1E-51 T 28-03-2018 AM393_RS11205 1eb5f633a37038fce4e1b2cd7b072183 309 SUPERFAMILY SSF56752 7 307 7.72E-107 T 28-03-2018 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 AM393_RS18045 490ece5f3be6fc569c29d40a9b392f5d 137 Hamap MF_00907 Proofreading thioesterase EntH [entH]. 1 137 48.536 T 28-03-2018 IPR026576 Proofreading thioesterase EntH GO:0009239|GO:0016790 AM393_RS18045 490ece5f3be6fc569c29d40a9b392f5d 137 SUPERFAMILY SSF54637 1 136 4.07E-32 T 28-03-2018 IPR029069 HotDog domain AM393_RS18045 490ece5f3be6fc569c29d40a9b392f5d 137 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 19 134 1.4E-44 T 28-03-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 AM393_RS18045 490ece5f3be6fc569c29d40a9b392f5d 137 Pfam PF03061 Thioesterase superfamily 50 127 2.8E-18 T 28-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AM393_RS18045 490ece5f3be6fc569c29d40a9b392f5d 137 Gene3D G3DSA:3.10.129.10 1 136 3.6E-28 T 28-03-2018 AM393_RS01445 54397e2554b5b8fe2207fd21b08d09ac 544 Pfam PF00999 Sodium/hydrogen exchanger family 7 418 2.4E-64 T 28-03-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AM393_RS01445 54397e2554b5b8fe2207fd21b08d09ac 544 TIGRFAM TIGR00831 a_cpa1: Na+/H+ antiporter 9 543 5.4E-112 T 28-03-2018 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria GO:0006812|GO:0015299|GO:0016021 AM393_RS14730 90dd8a198babb546808f32721f6a9225 251 Gene3D G3DSA:3.20.20.70 1 251 1.7E-87 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM393_RS14730 90dd8a198babb546808f32721f6a9225 251 SUPERFAMILY SSF51569 3 250 4.15E-82 T 28-03-2018 AM393_RS14730 90dd8a198babb546808f32721f6a9225 251 ProSitePatterns PS01028 Dehydroquinase class I active site. 115 145 - T 28-03-2018 IPR018508 3-dehydroquinate dehydratase, active site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AM393_RS14730 90dd8a198babb546808f32721f6a9225 251 TIGRFAM TIGR01093 aroD: 3-dehydroquinate dehydratase, type I 19 246 8.4E-79 T 28-03-2018 IPR001381 3-dehydroquinate dehydratase type I GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AM393_RS14730 90dd8a198babb546808f32721f6a9225 251 Pfam PF01487 Type I 3-dehydroquinase 20 246 5.1E-74 T 28-03-2018 IPR001381 3-dehydroquinate dehydratase type I GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AM393_RS14730 90dd8a198babb546808f32721f6a9225 251 Hamap MF_00214 3-dehydroquinate dehydratase [aroD]. 18 250 39.007 T 28-03-2018 IPR001381 3-dehydroquinate dehydratase type I GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AM393_RS09175 d1ae49dd51f620465da3f446018e4e6d 369 Gene3D G3DSA:1.50.10.10 23 361 6.1E-100 T 28-03-2018 AM393_RS09175 d1ae49dd51f620465da3f446018e4e6d 369 PRINTS PR00735 Glycosyl hydrolase family 8 signature 180 197 6.2E-20 T 28-03-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 AM393_RS09175 d1ae49dd51f620465da3f446018e4e6d 369 PRINTS PR00735 Glycosyl hydrolase family 8 signature 115 133 6.2E-20 T 28-03-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 AM393_RS09175 d1ae49dd51f620465da3f446018e4e6d 369 PRINTS PR00735 Glycosyl hydrolase family 8 signature 53 66 6.2E-20 T 28-03-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 AM393_RS09175 d1ae49dd51f620465da3f446018e4e6d 369 PRINTS PR00735 Glycosyl hydrolase family 8 signature 332 346 6.2E-20 T 28-03-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 AM393_RS09175 d1ae49dd51f620465da3f446018e4e6d 369 PRINTS PR00735 Glycosyl hydrolase family 8 signature 216 227 6.2E-20 T 28-03-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 AM393_RS09175 d1ae49dd51f620465da3f446018e4e6d 369 PRINTS PR00735 Glycosyl hydrolase family 8 signature 241 250 6.2E-20 T 28-03-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 AM393_RS09175 d1ae49dd51f620465da3f446018e4e6d 369 Pfam PF01270 Glycosyl hydrolases family 8 2 347 1.1E-115 T 28-03-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 AM393_RS09175 d1ae49dd51f620465da3f446018e4e6d 369 SUPERFAMILY SSF48208 13 352 2.21E-101 T 28-03-2018 IPR008928 Six-hairpin glycosidase-like GO:0003824 AM393_RS19875 1fa136c0445d8c3fd11c6068e74f3cfb 573 SMART SM00382 365 549 3.3E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS19875 1fa136c0445d8c3fd11c6068e74f3cfb 573 TIGRFAM TIGR02868 CydC: thiol reductant ABC exporter, CydC subunit 6 533 2.7E-176 T 28-03-2018 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC GO:0006810|GO:0016021|GO:0042626 AM393_RS19875 1fa136c0445d8c3fd11c6068e74f3cfb 573 Pfam PF00664 ABC transporter transmembrane region 26 287 3.7E-11 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AM393_RS19875 1fa136c0445d8c3fd11c6068e74f3cfb 573 Gene3D G3DSA:1.20.1560.10 1 325 2.7E-34 T 28-03-2018 AM393_RS19875 1fa136c0445d8c3fd11c6068e74f3cfb 573 ProSitePatterns PS00211 ABC transporters family signature. 475 489 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS19875 1fa136c0445d8c3fd11c6068e74f3cfb 573 Gene3D G3DSA:3.40.50.300 326 571 8.5E-70 T 28-03-2018 AM393_RS19875 1fa136c0445d8c3fd11c6068e74f3cfb 573 Pfam PF00005 ABC transporter 356 502 3.6E-33 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS19875 1fa136c0445d8c3fd11c6068e74f3cfb 573 SUPERFAMILY SSF52540 333 570 6.43E-73 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS19875 1fa136c0445d8c3fd11c6068e74f3cfb 573 SUPERFAMILY SSF90123 7 323 2.35E-45 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AM393_RS17530 9e5c71d5621e777b34a17965d9b01b88 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 74 85 5.9E-5 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS17530 9e5c71d5621e777b34a17965d9b01b88 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 165 5.9E-5 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS17530 9e5c71d5621e777b34a17965d9b01b88 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 126 134 5.9E-5 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS17530 9e5c71d5621e777b34a17965d9b01b88 258 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 181 0.0062 T 28-03-2018 AM393_RS17530 9e5c71d5621e777b34a17965d9b01b88 258 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 247 1.8E-51 T 28-03-2018 AM393_RS17530 9e5c71d5621e777b34a17965d9b01b88 258 SUPERFAMILY SSF51735 3 250 1.33E-65 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS17530 9e5c71d5621e777b34a17965d9b01b88 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 1.8E-34 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS17530 9e5c71d5621e777b34a17965d9b01b88 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.8E-34 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS17530 9e5c71d5621e777b34a17965d9b01b88 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 231 1.8E-34 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS17530 9e5c71d5621e777b34a17965d9b01b88 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 74 85 1.8E-34 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS17530 9e5c71d5621e777b34a17965d9b01b88 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 120 136 1.8E-34 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS17530 9e5c71d5621e777b34a17965d9b01b88 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 1.8E-34 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS17530 9e5c71d5621e777b34a17965d9b01b88 258 Gene3D G3DSA:3.40.50.720 2 255 2.1E-60 T 28-03-2018 AM393_RS17530 9e5c71d5621e777b34a17965d9b01b88 258 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 133 161 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM393_RS19425 6992962d05fbebd5e92e068d6cbb8182 350 Pfam PF00589 Phage integrase family 280 320 5.5E-11 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM393_RS19425 6992962d05fbebd5e92e068d6cbb8182 350 Pfam PF00589 Phage integrase family 174 246 1.0E-9 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM393_RS19425 6992962d05fbebd5e92e068d6cbb8182 350 Gene3D G3DSA:1.10.150.130 55 175 1.6E-9 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal AM393_RS19425 6992962d05fbebd5e92e068d6cbb8182 350 SUPERFAMILY SSF56349 60 326 7.3E-43 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AM393_RS19425 6992962d05fbebd5e92e068d6cbb8182 350 Gene3D G3DSA:1.10.443.10 176 331 8.1E-32 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM393_RS23620 28d17fb2571ff86f822ee18a18fb0b49 73 Gene3D G3DSA:3.30.429.10 1 55 7.8E-11 T 28-03-2018 AM393_RS23620 28d17fb2571ff86f822ee18a18fb0b49 73 Pfam PF14552 Tautomerase enzyme 2 51 5.5E-16 T 28-03-2018 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 AM393_RS23620 28d17fb2571ff86f822ee18a18fb0b49 73 SUPERFAMILY SSF55331 1 58 1.17E-13 T 28-03-2018 IPR014347 Tautomerase/MIF superfamily AM393_RS29150 2ca425ccee90c1b8d4985984f05d0005 116 Pfam PF05717 IS66 Orf2 like protein 9 106 3.4E-36 T 28-03-2018 IPR008878 Transposase IS66, Orf2 AM393_RS14845 47b7ba61d9320bdbbe026d11c12ed68f 424 Pfam PF01098 Cell cycle protein 57 412 9.8E-129 T 28-03-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 AM393_RS14845 47b7ba61d9320bdbbe026d11c12ed68f 424 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 55 410 3.0E-135 T 28-03-2018 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 AM393_RS14845 47b7ba61d9320bdbbe026d11c12ed68f 424 Hamap MF_00913 Putative lipid II flippase FtsW [ftsW]. 53 420 42.142 T 28-03-2018 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 AM393_RS14845 47b7ba61d9320bdbbe026d11c12ed68f 424 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 369 393 - T 28-03-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 AM393_RS09080 dfe18fcee3ee236682c43e6124aabb43 680 SUPERFAMILY SSF55486 1 677 2.08E-214 T 28-03-2018 AM393_RS09080 dfe18fcee3ee236682c43e6124aabb43 680 Pfam PF01432 Peptidase family M3 222 677 1.5E-175 T 28-03-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 AM393_RS09080 dfe18fcee3ee236682c43e6124aabb43 680 Gene3D G3DSA:1.20.1050.40 4 138 2.4E-37 T 28-03-2018 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal AM393_RS09080 dfe18fcee3ee236682c43e6124aabb43 680 Gene3D G3DSA:1.10.1370.10 457 680 2.2E-71 T 28-03-2018 AM393_RS09080 dfe18fcee3ee236682c43e6124aabb43 680 Gene3D G3DSA:1.10.1370.10 140 439 1.6E-61 T 28-03-2018 AM393_RS24615 8a00b2521dac56fa019fc9fd783d5ee3 107 Gene3D G3DSA:3.40.50.2300 2 107 9.7E-37 T 28-03-2018 AM393_RS24615 8a00b2521dac56fa019fc9fd783d5ee3 107 SUPERFAMILY SSF52794 1 102 5.23E-34 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AM393_RS24615 8a00b2521dac56fa019fc9fd783d5ee3 107 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 3 94 8.8E-22 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AM393_RS24145 ba75b2e3c9e1be5b9519fe44cb1b074b 263 SUPERFAMILY SSF56281 32 252 4.98E-32 T 28-03-2018 IPR001279 Metallo-beta-lactamase AM393_RS24145 ba75b2e3c9e1be5b9519fe44cb1b074b 263 Gene3D G3DSA:3.60.15.10 6 263 6.6E-35 T 28-03-2018 IPR001279 Metallo-beta-lactamase AM393_RS24145 ba75b2e3c9e1be5b9519fe44cb1b074b 263 SMART SM00849 34 247 1.7E-20 T 28-03-2018 IPR001279 Metallo-beta-lactamase AM393_RS24145 ba75b2e3c9e1be5b9519fe44cb1b074b 263 Pfam PF00753 Metallo-beta-lactamase superfamily 33 247 3.8E-22 T 28-03-2018 IPR001279 Metallo-beta-lactamase AM393_RS19510 de4de22e2082718b6df71afab7b254aa 341 Pfam PF04860 Phage portal protein 95 337 8.9E-15 T 28-03-2018 IPR006944 Bacteriophage/Gene transfer agent portal protein AM393_RS19510 de4de22e2082718b6df71afab7b254aa 341 PIRSF PIRSF018494 1 341 1.1E-155 T 28-03-2018 IPR030935 Phage portal protein PBSX family, Proteobacteria AM393_RS19510 de4de22e2082718b6df71afab7b254aa 341 TIGRFAM TIGR01540 portal_PBSX: phage portal protein, PBSX family 52 332 1.9E-110 T 28-03-2018 IPR006430 Phage portal protein PBSX family AM393_RS16515 7a8ff789aeb5506b762b1b0ee5d59d10 566 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 166 303 2.8E-15 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain AM393_RS16515 7a8ff789aeb5506b762b1b0ee5d59d10 566 SUPERFAMILY SSF53850 122 561 1.54E-58 T 28-03-2018 AM393_RS16515 7a8ff789aeb5506b762b1b0ee5d59d10 566 Pfam PF12793 Sugar transport-related sRNA regulator N-term 6 118 4.1E-37 T 28-03-2018 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain AM393_RS16515 7a8ff789aeb5506b762b1b0ee5d59d10 566 Gene3D G3DSA:1.10.10.10 1 138 6.1E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS16515 7a8ff789aeb5506b762b1b0ee5d59d10 566 Gene3D G3DSA:3.40.190.10 259 308 1.4E-4 T 28-03-2018 AM393_RS16515 7a8ff789aeb5506b762b1b0ee5d59d10 566 Gene3D G3DSA:3.10.105.10 385 534 2.4E-6 T 28-03-2018 AM393_RS16515 7a8ff789aeb5506b762b1b0ee5d59d10 566 Gene3D G3DSA:3.90.76.10 139 258 5.0E-17 T 28-03-2018 AM393_RS26605 eb6d973470e923a6d462fa2684aa772d 337 SUPERFAMILY SSF52540 49 316 5.89E-68 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS26605 eb6d973470e923a6d462fa2684aa772d 337 ProSitePatterns PS00211 ABC transporters family signature. 169 183 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS26605 eb6d973470e923a6d462fa2684aa772d 337 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 248 330 6.3E-25 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AM393_RS26605 eb6d973470e923a6d462fa2684aa772d 337 SMART SM00382 48 254 4.6E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS26605 eb6d973470e923a6d462fa2684aa772d 337 Gene3D G3DSA:3.40.50.300 18 330 9.1E-73 T 28-03-2018 AM393_RS26605 eb6d973470e923a6d462fa2684aa772d 337 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 248 312 2.5E-21 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AM393_RS26605 eb6d973470e923a6d462fa2684aa772d 337 Pfam PF00005 ABC transporter 40 196 1.1E-27 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS05345 4a383c926486de1071f47de4a785ed3e 358 TIGRFAM TIGR01140 L_thr_O3P_dcar: threonine-phosphate decarboxylase 8 354 5.8E-104 T 28-03-2018 IPR005860 L-threonine-O-3-phosphate decarboxylase GO:0003824|GO:0009236 KEGG: 00860+4.1.1.81|MetaCyc: PWY-5443 AM393_RS05345 4a383c926486de1071f47de4a785ed3e 358 Gene3D G3DSA:3.40.640.10 38 247 2.4E-37 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM393_RS05345 4a383c926486de1071f47de4a785ed3e 358 SUPERFAMILY SSF53383 5 357 6.46E-81 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM393_RS05345 4a383c926486de1071f47de4a785ed3e 358 Gene3D G3DSA:3.90.1150.10 248 358 7.2E-20 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM393_RS05345 4a383c926486de1071f47de4a785ed3e 358 Gene3D G3DSA:1.10.10.60 1 27 0.11 T 28-03-2018 AM393_RS05345 4a383c926486de1071f47de4a785ed3e 358 Pfam PF00155 Aminotransferase class I and II 26 352 5.0E-40 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AM393_RS05345 4a383c926486de1071f47de4a785ed3e 358 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 213 226 - T 28-03-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 AM393_RS11720 57f15e208a548292c2bbca5c0bf6b6d7 1407 Pfam PF05000 RNA polymerase Rpb1, domain 4 674 763 1.7E-18 T 28-03-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM393_RS11720 57f15e208a548292c2bbca5c0bf6b6d7 1407 Pfam PF04997 RNA polymerase Rpb1, domain 1 15 342 2.2E-89 T 28-03-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM393_RS11720 57f15e208a548292c2bbca5c0bf6b6d7 1407 SMART SM00663 235 514 1.1E-184 T 28-03-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM393_RS11720 57f15e208a548292c2bbca5c0bf6b6d7 1407 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 10 1374 18.963 T 28-03-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM393_RS11720 57f15e208a548292c2bbca5c0bf6b6d7 1407 Pfam PF00623 RNA polymerase Rpb1, domain 2 392 485 3.9E-27 T 28-03-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM393_RS11720 57f15e208a548292c2bbca5c0bf6b6d7 1407 Pfam PF00623 RNA polymerase Rpb1, domain 2 344 393 1.2E-7 T 28-03-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM393_RS11720 57f15e208a548292c2bbca5c0bf6b6d7 1407 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 19 1367 0.0 T 28-03-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM393_RS11720 57f15e208a548292c2bbca5c0bf6b6d7 1407 Gene3D G3DSA:2.40.40.20 346 488 7.3E-40 T 28-03-2018 AM393_RS11720 57f15e208a548292c2bbca5c0bf6b6d7 1407 Gene3D G3DSA:2.40.50.100 1022 1126 9.2E-13 T 28-03-2018 AM393_RS11720 57f15e208a548292c2bbca5c0bf6b6d7 1407 Gene3D G3DSA:2.40.50.100 907 1021 2.3E-27 T 28-03-2018 AM393_RS11720 57f15e208a548292c2bbca5c0bf6b6d7 1407 SUPERFAMILY SSF64484 1133 1363 0.0 T 28-03-2018 AM393_RS11720 57f15e208a548292c2bbca5c0bf6b6d7 1407 SUPERFAMILY SSF64484 16 944 0.0 T 28-03-2018 AM393_RS11720 57f15e208a548292c2bbca5c0bf6b6d7 1407 Gene3D G3DSA:2.40.50.100 1153 1213 1.5E-14 T 28-03-2018 AM393_RS11720 57f15e208a548292c2bbca5c0bf6b6d7 1407 Pfam PF04998 RNA polymerase Rpb1, domain 5 766 1315 1.5E-77 T 28-03-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM393_RS11720 57f15e208a548292c2bbca5c0bf6b6d7 1407 Pfam PF04983 RNA polymerase Rpb1, domain 3 489 644 4.2E-26 T 28-03-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM393_RS21720 0de287529ee59bb1bad591be812f59b5 890 Gene3D G3DSA:3.20.19.10 652 890 2.3E-94 T 28-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AM393_RS21720 0de287529ee59bb1bad591be812f59b5 890 ProSitePatterns PS00450 Aconitase family signature 1. 427 443 - T 28-03-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 AM393_RS21720 0de287529ee59bb1bad591be812f59b5 890 Gene3D G3DSA:3.30.499.10 27 239 3.4E-74 T 28-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 AM393_RS21720 0de287529ee59bb1bad591be812f59b5 890 Pfam PF00330 Aconitase family (aconitate hydratase) 69 562 6.4E-183 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM393_RS21720 0de287529ee59bb1bad591be812f59b5 890 ProSitePatterns PS01244 Aconitase family signature 2. 493 506 - T 28-03-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 AM393_RS21720 0de287529ee59bb1bad591be812f59b5 890 Pfam PF00694 Aconitase C-terminal domain 691 818 5.3E-50 T 28-03-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33 AM393_RS21720 0de287529ee59bb1bad591be812f59b5 890 Gene3D G3DSA:3.30.499.10 372 576 4.5E-64 T 28-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 AM393_RS21720 0de287529ee59bb1bad591be812f59b5 890 Gene3D G3DSA:3.40.1060.10 240 371 4.1E-45 T 28-03-2018 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33 AM393_RS21720 0de287529ee59bb1bad591be812f59b5 890 PRINTS PR00415 Aconitase family signature 217 232 3.1E-42 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM393_RS21720 0de287529ee59bb1bad591be812f59b5 890 PRINTS PR00415 Aconitase family signature 431 442 3.1E-42 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM393_RS21720 0de287529ee59bb1bad591be812f59b5 890 PRINTS PR00415 Aconitase family signature 203 216 3.1E-42 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM393_RS21720 0de287529ee59bb1bad591be812f59b5 890 PRINTS PR00415 Aconitase family signature 493 506 3.1E-42 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM393_RS21720 0de287529ee59bb1bad591be812f59b5 890 PRINTS PR00415 Aconitase family signature 279 292 3.1E-42 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM393_RS21720 0de287529ee59bb1bad591be812f59b5 890 PRINTS PR00415 Aconitase family signature 293 306 3.1E-42 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM393_RS21720 0de287529ee59bb1bad591be812f59b5 890 PRINTS PR00415 Aconitase family signature 170 178 3.1E-42 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM393_RS21720 0de287529ee59bb1bad591be812f59b5 890 PRINTS PR00415 Aconitase family signature 372 386 3.1E-42 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM393_RS21720 0de287529ee59bb1bad591be812f59b5 890 PRINTS PR00415 Aconitase family signature 146 159 3.1E-42 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM393_RS21720 0de287529ee59bb1bad591be812f59b5 890 SUPERFAMILY SSF52016 630 889 8.63E-90 T 28-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AM393_RS21720 0de287529ee59bb1bad591be812f59b5 890 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 18 890 0.0 T 28-03-2018 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-917937 AM393_RS21720 0de287529ee59bb1bad591be812f59b5 890 SUPERFAMILY SSF53732 10 625 6.54E-226 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM393_RS19755 48920c73cea80a1a321a91cc44193257 242 Gene3D G3DSA:3.40.50.300 1 242 1.0E-66 T 28-03-2018 AM393_RS19755 48920c73cea80a1a321a91cc44193257 242 SMART SM00382 27 218 2.0E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS19755 48920c73cea80a1a321a91cc44193257 242 Pfam PF00005 ABC transporter 20 170 6.2E-35 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS19755 48920c73cea80a1a321a91cc44193257 242 PIRSF PIRSF039085 1 242 3.8E-86 T 28-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 AM393_RS19755 48920c73cea80a1a321a91cc44193257 242 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS19755 48920c73cea80a1a321a91cc44193257 242 SUPERFAMILY SSF52540 3 234 1.04E-69 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS15750 a0f632a6ac35d0b7f0329de9fb67d44f 183 PIRSF PIRSF016897 1 183 1.3E-43 T 28-03-2018 IPR006699 Glycerol-3-phosphate responsive antiterminator GO:0006355|GO:0009607 AM393_RS15750 a0f632a6ac35d0b7f0329de9fb67d44f 183 Pfam PF04309 Glycerol-3-phosphate responsive antiterminator 7 183 2.6E-48 T 28-03-2018 IPR006699 Glycerol-3-phosphate responsive antiterminator GO:0006355|GO:0009607 AM393_RS15750 a0f632a6ac35d0b7f0329de9fb67d44f 183 SUPERFAMILY SSF110391 7 183 5.89E-44 T 28-03-2018 IPR006699 Glycerol-3-phosphate responsive antiterminator GO:0006355|GO:0009607 AM393_RS15750 a0f632a6ac35d0b7f0329de9fb67d44f 183 Gene3D G3DSA:3.20.20.400 1 183 7.9E-55 T 28-03-2018 AM393_RS21675 2e7fe96f2af365fca0cd5d0981718105 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 184 1.0E-20 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS21675 2e7fe96f2af365fca0cd5d0981718105 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 139 155 1.0E-20 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS21675 2e7fe96f2af365fca0cd5d0981718105 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 14 31 1.0E-20 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS21675 2e7fe96f2af365fca0cd5d0981718105 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 186 203 1.0E-20 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS21675 2e7fe96f2af365fca0cd5d0981718105 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 91 102 1.0E-20 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS21675 2e7fe96f2af365fca0cd5d0981718105 253 SUPERFAMILY SSF51735 9 244 3.1E-63 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS21675 2e7fe96f2af365fca0cd5d0981718105 253 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 13 198 1.8E-4 T 28-03-2018 AM393_RS21675 2e7fe96f2af365fca0cd5d0981718105 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 152 180 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM393_RS21675 2e7fe96f2af365fca0cd5d0981718105 253 Gene3D G3DSA:3.40.50.720 1 253 3.6E-60 T 28-03-2018 AM393_RS21675 2e7fe96f2af365fca0cd5d0981718105 253 Pfam PF00106 short chain dehydrogenase 14 209 9.8E-52 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS04865 4a1eab66897151b35bd01ba379878126 244 Gene3D G3DSA:3.40.50.620 10 244 1.3E-39 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM393_RS04865 4a1eab66897151b35bd01ba379878126 244 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 48 219 6.3E-52 T 28-03-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 Reactome: R-HSA-196843 AM393_RS04865 4a1eab66897151b35bd01ba379878126 244 PIRSF PIRSF000857 7 244 2.9E-55 T 28-03-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 AM393_RS04865 4a1eab66897151b35bd01ba379878126 244 SUPERFAMILY SSF52402 21 208 8.76E-54 T 28-03-2018 AM393_RS04865 4a1eab66897151b35bd01ba379878126 244 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 33 243 2.8E-95 T 28-03-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 AM393_RS04865 4a1eab66897151b35bd01ba379878126 244 TIGRFAM TIGR02057 PAPS_reductase: phosphoadenosine phosphosulfate reductase 21 242 8.1E-104 T 28-03-2018 IPR011800 Phosphoadenosine phosphosulphate reductase CysH GO:0004604|GO:0019379 KEGG: 00920+1.8.4.8 AM393_RS04865 4a1eab66897151b35bd01ba379878126 244 Hamap MF_00063 Phosphoadenosine phosphosulfate reductase [cysH]. 9 243 40.414 T 28-03-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 AM393_RS05110 59c90e6e58e08e41514d5c7c906353ea 273 SUPERFAMILY SSF69572 10 261 7.98E-63 T 28-03-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 AM393_RS05110 59c90e6e58e08e41514d5c7c906353ea 273 Pfam PF00899 ThiF family 20 260 3.2E-36 T 28-03-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 AM393_RS05110 59c90e6e58e08e41514d5c7c906353ea 273 Gene3D G3DSA:3.40.50.720 3 269 1.4E-53 T 28-03-2018 AM393_RS23965 5e5be9d61d872a3787ea8769b74b9ae1 257 Pfam PF00455 DeoR C terminal sensor domain 75 233 4.8E-46 T 28-03-2018 IPR014036 DeoR C-terminal sensor domain AM393_RS23965 5e5be9d61d872a3787ea8769b74b9ae1 257 SMART SM00420 6 58 3.2E-19 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM393_RS23965 5e5be9d61d872a3787ea8769b74b9ae1 257 SUPERFAMILY SSF100950 75 235 1.51E-30 T 28-03-2018 AM393_RS23965 5e5be9d61d872a3787ea8769b74b9ae1 257 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 3.5E-8 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM393_RS23965 5e5be9d61d872a3787ea8769b74b9ae1 257 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 3.5E-8 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM393_RS23965 5e5be9d61d872a3787ea8769b74b9ae1 257 SUPERFAMILY SSF46785 4 59 9.9E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS23965 5e5be9d61d872a3787ea8769b74b9ae1 257 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 28-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 AM393_RS23965 5e5be9d61d872a3787ea8769b74b9ae1 257 Gene3D G3DSA:1.10.10.10 1 58 8.2E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS23965 5e5be9d61d872a3787ea8769b74b9ae1 257 Gene3D G3DSA:3.40.50.1360 73 254 2.1E-36 T 28-03-2018 AM393_RS23965 5e5be9d61d872a3787ea8769b74b9ae1 257 SMART SM01134 73 234 9.1E-61 T 28-03-2018 AM393_RS23965 5e5be9d61d872a3787ea8769b74b9ae1 257 Pfam PF08220 DeoR-like helix-turn-helix domain 6 60 1.5E-17 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM393_RS25740 bfc1d6b636a70f373887d07ad84d90fa 329 Gene3D G3DSA:2.60.120.330 1 329 1.9E-77 T 28-03-2018 IPR027443 Isopenicillin N synthase-like AM393_RS25740 bfc1d6b636a70f373887d07ad84d90fa 329 Pfam PF14226 non-haem dioxygenase in morphine synthesis N-terminal 35 129 9.3E-19 T 28-03-2018 IPR026992 Non-haem dioxygenase N-terminal domain AM393_RS25740 bfc1d6b636a70f373887d07ad84d90fa 329 Pfam PF03171 2OG-Fe(II) oxygenase superfamily 191 295 9.2E-19 T 28-03-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 AM393_RS25740 bfc1d6b636a70f373887d07ad84d90fa 329 SUPERFAMILY SSF51197 31 326 6.59E-75 T 28-03-2018 AM393_RS20330 4822dff1b6207ddfdba34dc0c2cc84bd 374 ProSitePatterns PS00570 Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 89 112 - T 28-03-2018 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site GO:0005506|GO:0016705|GO:0051537|GO:0055114 AM393_RS20330 4822dff1b6207ddfdba34dc0c2cc84bd 374 Gene3D G3DSA:2.102.10.10 44 150 6.7E-26 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AM393_RS20330 4822dff1b6207ddfdba34dc0c2cc84bd 374 SUPERFAMILY SSF50022 16 160 3.8E-47 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AM393_RS20330 4822dff1b6207ddfdba34dc0c2cc84bd 374 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 184 371 2.0E-21 T 28-03-2018 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 AM393_RS20330 4822dff1b6207ddfdba34dc0c2cc84bd 374 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 61 76 3.7E-25 T 28-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 AM393_RS20330 4822dff1b6207ddfdba34dc0c2cc84bd 374 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 103 123 3.7E-25 T 28-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 AM393_RS20330 4822dff1b6207ddfdba34dc0c2cc84bd 374 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 31 56 3.7E-25 T 28-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 AM393_RS20330 4822dff1b6207ddfdba34dc0c2cc84bd 374 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 144 170 3.7E-25 T 28-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 AM393_RS20330 4822dff1b6207ddfdba34dc0c2cc84bd 374 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 82 102 3.7E-25 T 28-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 AM393_RS20330 4822dff1b6207ddfdba34dc0c2cc84bd 374 Gene3D G3DSA:3.90.380.10 151 369 9.1E-40 T 28-03-2018 AM393_RS20330 4822dff1b6207ddfdba34dc0c2cc84bd 374 Pfam PF00355 Rieske [2Fe-2S] domain 46 134 2.5E-20 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AM393_RS20330 4822dff1b6207ddfdba34dc0c2cc84bd 374 SUPERFAMILY SSF55961 160 371 1.88E-34 T 28-03-2018 AM393_RS20105 97067f0dfc112be7a1a1fb157e1322d1 412 Pfam PF01546 Peptidase family M20/M25/M40 79 405 3.0E-34 T 28-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 AM393_RS20105 97067f0dfc112be7a1a1fb157e1322d1 412 SUPERFAMILY SSF55031 212 328 1.34E-24 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain AM393_RS20105 97067f0dfc112be7a1a1fb157e1322d1 412 Gene3D G3DSA:3.40.630.10 2 256 1.7E-46 T 28-03-2018 AM393_RS20105 97067f0dfc112be7a1a1fb157e1322d1 412 Gene3D G3DSA:3.40.630.10 257 411 1.2E-21 T 28-03-2018 AM393_RS20105 97067f0dfc112be7a1a1fb157e1322d1 412 PIRSF PIRSF001235 6 412 1.7E-131 T 28-03-2018 IPR010158 Amidase, carbamoylase-type GO:0008152|GO:0016813 AM393_RS20105 97067f0dfc112be7a1a1fb157e1322d1 412 SUPERFAMILY SSF53187 2 222 1.15E-89 T 28-03-2018 AM393_RS20105 97067f0dfc112be7a1a1fb157e1322d1 412 SUPERFAMILY SSF53187 335 408 1.15E-89 T 28-03-2018 AM393_RS20105 97067f0dfc112be7a1a1fb157e1322d1 412 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 10 406 2.1E-129 T 28-03-2018 IPR010158 Amidase, carbamoylase-type GO:0008152|GO:0016813 AM393_RS15620 4997273784bb1a93d615cdcdc7b155c7 264 Hamap MF_00427 Na(+)-translocating NADH-quinone reductase subunit C [nqrC]. 8 259 35.767 T 28-03-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0055114 AM393_RS15620 4997273784bb1a93d615cdcdc7b155c7 264 TIGRFAM TIGR01938 nqrC: NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit 7 255 4.1E-93 T 28-03-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0055114 AM393_RS15620 4997273784bb1a93d615cdcdc7b155c7 264 SMART SM00900 149 247 1.1E-30 T 28-03-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 AM393_RS15620 4997273784bb1a93d615cdcdc7b155c7 264 Pfam PF04205 FMN-binding domain 149 243 1.1E-14 T 28-03-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 AM393_RS15620 4997273784bb1a93d615cdcdc7b155c7 264 PIRSF PIRSF009437 2 262 7.2E-100 T 28-03-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0055114 AM393_RS01975 e166b8756ce670b281ae4cf0460fe3ef 257 SUPERFAMILY SSF53613 11 254 1.71E-59 T 28-03-2018 IPR029056 Ribokinase-like AM393_RS01975 e166b8756ce670b281ae4cf0460fe3ef 257 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 166 183 6.4E-42 T 28-03-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AM393_RS01975 e166b8756ce670b281ae4cf0460fe3ef 257 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 35 56 6.4E-42 T 28-03-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AM393_RS01975 e166b8756ce670b281ae4cf0460fe3ef 257 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 66 74 6.4E-42 T 28-03-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AM393_RS01975 e166b8756ce670b281ae4cf0460fe3ef 257 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 22 29 6.4E-42 T 28-03-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AM393_RS01975 e166b8756ce670b281ae4cf0460fe3ef 257 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 122 136 6.4E-42 T 28-03-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AM393_RS01975 e166b8756ce670b281ae4cf0460fe3ef 257 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 92 109 6.4E-42 T 28-03-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AM393_RS01975 e166b8756ce670b281ae4cf0460fe3ef 257 Gene3D G3DSA:3.40.1190.20 6 256 9.0E-52 T 28-03-2018 IPR029056 Ribokinase-like AM393_RS01975 e166b8756ce670b281ae4cf0460fe3ef 257 Hamap MF_00228 Hydroxyethylthiazole kinase [thiM]. 16 256 30.551 T 28-03-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AM393_RS01975 e166b8756ce670b281ae4cf0460fe3ef 257 PIRSF PIRSF000513 9 256 5.9E-93 T 28-03-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AM393_RS01975 e166b8756ce670b281ae4cf0460fe3ef 257 Pfam PF02110 Hydroxyethylthiazole kinase family 17 253 1.7E-94 T 28-03-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AM393_RS01975 e166b8756ce670b281ae4cf0460fe3ef 257 TIGRFAM TIGR00694 thiM: hydroxyethylthiazole kinase 17 253 1.1E-87 T 28-03-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AM393_RS12710 fada7d8eccf02137b71fd2346d03c2d1 596 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 375 382 1.1E-5 T 28-03-2018 AM393_RS12710 fada7d8eccf02137b71fd2346d03c2d1 596 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 1.1E-5 T 28-03-2018 AM393_RS12710 fada7d8eccf02137b71fd2346d03c2d1 596 TIGRFAM TIGR01176 fum_red_Fp: fumarate reductase (quinol), flavoprotein subunit 3 582 0.0 T 28-03-2018 IPR005884 Fumarate reductase, flavoprotein subunit GO:0009061|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.4|KEGG: 00620+1.3.5.4|KEGG: 00650+1.3.5.4|KEGG: 00720+1.3.5.4|MetaCyc: PWY-5392|MetaCyc: PWY-5913|MetaCyc: PWY-7384 AM393_RS12710 fada7d8eccf02137b71fd2346d03c2d1 596 Gene3D G3DSA:1.20.58.100 448 550 1.5E-25 T 28-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM393_RS12710 fada7d8eccf02137b71fd2346d03c2d1 596 Gene3D G3DSA:4.10.80.40 551 576 1.3E-12 T 28-03-2018 AM393_RS12710 fada7d8eccf02137b71fd2346d03c2d1 596 SUPERFAMILY SSF56425 227 358 9.27E-43 T 28-03-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM393_RS12710 fada7d8eccf02137b71fd2346d03c2d1 596 SUPERFAMILY SSF51905 361 416 9.04E-72 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS12710 fada7d8eccf02137b71fd2346d03c2d1 596 SUPERFAMILY SSF51905 3 250 9.04E-72 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS12710 fada7d8eccf02137b71fd2346d03c2d1 596 Pfam PF00890 FAD binding domain 7 397 1.7E-115 T 28-03-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM393_RS12710 fada7d8eccf02137b71fd2346d03c2d1 596 SUPERFAMILY SSF46977 444 590 6.28E-45 T 28-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM393_RS12710 fada7d8eccf02137b71fd2346d03c2d1 596 Gene3D G3DSA:3.50.50.60 2 447 1.3E-61 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS12710 fada7d8eccf02137b71fd2346d03c2d1 596 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 28-03-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM393_RS12710 fada7d8eccf02137b71fd2346d03c2d1 596 Pfam PF02910 Fumarate reductase flavoprotein C-term 453 581 4.1E-38 T 28-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM393_RS12710 fada7d8eccf02137b71fd2346d03c2d1 596 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 360 382 1.3E-10 T 28-03-2018 AM393_RS12710 fada7d8eccf02137b71fd2346d03c2d1 596 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 1.3E-10 T 28-03-2018 AM393_RS12710 fada7d8eccf02137b71fd2346d03c2d1 596 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 7 581 9.9E-247 T 28-03-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM393_RS12710 fada7d8eccf02137b71fd2346d03c2d1 596 PIRSF PIRSF000171 1 574 9.4E-42 T 28-03-2018 AM393_RS20670 69015e032bbd7e4784f0246de66ac00e 348 Pfam PF01979 Amidohydrolase family 15 307 2.7E-22 T 28-03-2018 IPR006680 Amidohydrolase-related GO:0016787 AM393_RS20670 69015e032bbd7e4784f0246de66ac00e 348 ProSitePatterns PS00483 Dihydroorotase signature 2. 249 260 - T 28-03-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM393_RS20670 69015e032bbd7e4784f0246de66ac00e 348 SUPERFAMILY SSF51556 8 346 4.33E-148 T 28-03-2018 IPR032466 Metal-dependent hydrolase AM393_RS20670 69015e032bbd7e4784f0246de66ac00e 348 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 8 347 5.0E-158 T 28-03-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM393_RS20670 69015e032bbd7e4784f0246de66ac00e 348 PIRSF PIRSF001237 4 348 3.4E-140 T 28-03-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM393_RS20670 69015e032bbd7e4784f0246de66ac00e 348 Gene3D G3DSA:3.20.20.140 14 348 7.2E-58 T 28-03-2018 AM393_RS20670 69015e032bbd7e4784f0246de66ac00e 348 Hamap MF_00219 Dihydroorotase [pyrC]. 6 347 60.292 T 28-03-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM393_RS16195 72ddce99e73f040684871b25b21ada8f 300 SUPERFAMILY SSF53850 90 291 7.42E-29 T 28-03-2018 AM393_RS16195 72ddce99e73f040684871b25b21ada8f 300 Gene3D G3DSA:1.10.10.10 1 88 8.4E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS16195 72ddce99e73f040684871b25b21ada8f 300 Pfam PF03466 LysR substrate binding domain 89 291 3.2E-24 T 28-03-2018 IPR005119 LysR, substrate-binding AM393_RS16195 72ddce99e73f040684871b25b21ada8f 300 Gene3D G3DSA:3.40.190.10 90 181 3.8E-13 T 28-03-2018 AM393_RS16195 72ddce99e73f040684871b25b21ada8f 300 SUPERFAMILY SSF46785 4 88 9.71E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS16195 72ddce99e73f040684871b25b21ada8f 300 Gene3D G3DSA:3.40.190.10 182 260 6.5E-9 T 28-03-2018 AM393_RS16195 72ddce99e73f040684871b25b21ada8f 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 64 3.5E-14 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS14630 7d0af8a4580707340c0df940df706cd3 541 SUPERFAMILY SSF55890 322 372 4.84E-9 T 28-03-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 AM393_RS14630 7d0af8a4580707340c0df940df706cd3 541 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 421 527 5.7E-17 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS14630 7d0af8a4580707340c0df940df706cd3 541 PRINTS PR00344 Bacterial sensor protein C-terminal signature 477 487 3.0E-10 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM393_RS14630 7d0af8a4580707340c0df940df706cd3 541 PRINTS PR00344 Bacterial sensor protein C-terminal signature 459 473 3.0E-10 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM393_RS14630 7d0af8a4580707340c0df940df706cd3 541 PRINTS PR00344 Bacterial sensor protein C-terminal signature 489 507 3.0E-10 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM393_RS14630 7d0af8a4580707340c0df940df706cd3 541 PRINTS PR00344 Bacterial sensor protein C-terminal signature 513 526 3.0E-10 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM393_RS14630 7d0af8a4580707340c0df940df706cd3 541 Gene3D G3DSA:3.30.450.20 203 320 3.1E-10 T 28-03-2018 AM393_RS14630 7d0af8a4580707340c0df940df706cd3 541 SMART SM00387 418 529 8.3E-22 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS14630 7d0af8a4580707340c0df940df706cd3 541 Pfam PF17203 Single cache domain 3 34 159 3.8E-19 T 28-03-2018 IPR033463 Single cache domain 3 AM393_RS14630 7d0af8a4580707340c0df940df706cd3 541 SUPERFAMILY SSF55874 394 526 8.64E-28 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS14630 7d0af8a4580707340c0df940df706cd3 541 Gene3D G3DSA:3.30.450.20 30 165 5.2E-21 T 28-03-2018 AM393_RS14630 7d0af8a4580707340c0df940df706cd3 541 SUPERFAMILY SSF103190 34 164 4.71E-33 T 28-03-2018 IPR029151 Periplasmic sensor domain-like AM393_RS14630 7d0af8a4580707340c0df940df706cd3 541 SUPERFAMILY SSF55785 210 311 2.09E-7 T 28-03-2018 IPR000014 PAS domain AM393_RS14630 7d0af8a4580707340c0df940df706cd3 541 Gene3D G3DSA:3.30.565.10 386 538 3.4E-28 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS14630 7d0af8a4580707340c0df940df706cd3 541 SMART SM00091 210 278 1.6E-6 T 28-03-2018 IPR000014 PAS domain AM393_RS14630 7d0af8a4580707340c0df940df706cd3 541 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 321 372 3.0E-8 T 28-03-2018 AM393_RS14630 7d0af8a4580707340c0df940df706cd3 541 Gene3D G3DSA:1.10.287.130 321 376 1.4E-15 T 28-03-2018 AM393_RS23785 f13447c59a62bb9ad5c4201532519ab6 334 SUPERFAMILY SSF49401 201 334 3.83E-22 T 28-03-2018 IPR008966 Adhesion domain AM393_RS23785 f13447c59a62bb9ad5c4201532519ab6 334 Pfam PF00419 Fimbrial protein 193 333 1.1E-11 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM393_RS23785 f13447c59a62bb9ad5c4201532519ab6 334 Gene3D G3DSA:2.60.40.1090 189 334 1.1E-25 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM393_RS09160 92c368ef2caa9bd66e40ac55bee44e4e 428 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 295 318 - T 28-03-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site AM393_RS09160 92c368ef2caa9bd66e40ac55bee44e4e 428 Gene3D G3DSA:1.10.3860.10 1 408 5.4E-115 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM393_RS09160 92c368ef2caa9bd66e40ac55bee44e4e 428 SUPERFAMILY SSF118215 9 401 1.83E-121 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM393_RS09160 92c368ef2caa9bd66e40ac55bee44e4e 428 Hamap MF_01300 C4-dicarboxylate transport protein [dctA]. 2 428 39.0 T 28-03-2018 IPR023954 C4-dicarboxylate transport protein GO:0006835|GO:0015293|GO:0016021 AM393_RS09160 92c368ef2caa9bd66e40ac55bee44e4e 428 Pfam PF00375 Sodium:dicarboxylate symporter family 9 401 6.9E-112 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM393_RS09160 92c368ef2caa9bd66e40ac55bee44e4e 428 PRINTS PR00173 Glutamate-aspartate symporter signature 292 318 1.4E-30 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM393_RS09160 92c368ef2caa9bd66e40ac55bee44e4e 428 PRINTS PR00173 Glutamate-aspartate symporter signature 7 27 1.4E-30 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM393_RS09160 92c368ef2caa9bd66e40ac55bee44e4e 428 PRINTS PR00173 Glutamate-aspartate symporter signature 145 167 1.4E-30 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM393_RS09160 92c368ef2caa9bd66e40ac55bee44e4e 428 PRINTS PR00173 Glutamate-aspartate symporter signature 192 211 1.4E-30 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM393_RS09160 92c368ef2caa9bd66e40ac55bee44e4e 428 PRINTS PR00173 Glutamate-aspartate symporter signature 74 99 1.4E-30 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM393_RS09160 92c368ef2caa9bd66e40ac55bee44e4e 428 PRINTS PR00173 Glutamate-aspartate symporter signature 327 346 1.4E-30 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM393_RS09160 92c368ef2caa9bd66e40ac55bee44e4e 428 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 36 51 - T 28-03-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site AM393_RS14335 78f547f9bc5805eae6e5084cdd1b4286 228 PIRSF PIRSF004808 1 228 2.1E-61 T 28-03-2018 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 AM393_RS14335 78f547f9bc5805eae6e5084cdd1b4286 228 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 2 224 2.8E-71 T 28-03-2018 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 AM393_RS14335 78f547f9bc5805eae6e5084cdd1b4286 228 SUPERFAMILY SSF75217 2 156 3.4E-30 T 28-03-2018 IPR029028 Alpha/beta knot methyltransferases AM393_RS14335 78f547f9bc5805eae6e5084cdd1b4286 228 Pfam PF00588 SpoU rRNA Methylase family 3 153 6.8E-33 T 28-03-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AM393_RS14335 78f547f9bc5805eae6e5084cdd1b4286 228 Gene3D G3DSA:3.40.1280.10 2 164 2.6E-33 T 28-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AM393_RS22540 d82789d12bdb96f52a9b33f0b5062065 327 Gene3D G3DSA:1.20.58.340 259 327 3.3E-16 T 28-03-2018 AM393_RS22540 d82789d12bdb96f52a9b33f0b5062065 327 Hamap MF_01565 Zinc transport protein ZntB [zntB]. 1 327 70.099 T 28-03-2018 IPR023714 Zinc transport protein ZntB GO:0005385|GO:0005886|GO:0071577 AM393_RS22540 d82789d12bdb96f52a9b33f0b5062065 327 SUPERFAMILY SSF143865 7 255 1.96E-50 T 28-03-2018 AM393_RS22540 d82789d12bdb96f52a9b33f0b5062065 327 SUPERFAMILY SSF144083 265 324 4.84E-13 T 28-03-2018 AM393_RS22540 d82789d12bdb96f52a9b33f0b5062065 327 Gene3D G3DSA:3.30.460.20 1 138 9.5E-20 T 28-03-2018 AM393_RS22540 d82789d12bdb96f52a9b33f0b5062065 327 Pfam PF01544 CorA-like Mg2+ transporter protein 40 323 3.6E-61 T 28-03-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 AM393_RS22540 d82789d12bdb96f52a9b33f0b5062065 327 Gene3D G3DSA:1.20.58.340 139 258 9.2E-17 T 28-03-2018 AM393_RS07040 0cc30ac3a907b392e463b8f2e2415f51 641 Pfam PF00158 Sigma-54 interaction domain 330 490 7.9E-36 T 28-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AM393_RS07040 0cc30ac3a907b392e463b8f2e2415f51 641 Gene3D G3DSA:3.40.50.300 323 496 1.2E-20 T 28-03-2018 AM393_RS07040 0cc30ac3a907b392e463b8f2e2415f51 641 SUPERFAMILY SSF55785 202 300 1.03E-6 T 28-03-2018 IPR000014 PAS domain AM393_RS07040 0cc30ac3a907b392e463b8f2e2415f51 641 Gene3D G3DSA:1.10.8.60 497 566 1.4E-12 T 28-03-2018 AM393_RS07040 0cc30ac3a907b392e463b8f2e2415f51 641 SMART SM00091 203 269 3.6E-5 T 28-03-2018 IPR000014 PAS domain AM393_RS07040 0cc30ac3a907b392e463b8f2e2415f51 641 Pfam PF00989 PAS fold 204 306 2.0E-14 T 28-03-2018 IPR013767 PAS fold GO:0006355 AM393_RS07040 0cc30ac3a907b392e463b8f2e2415f51 641 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 351 364 - T 28-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AM393_RS07040 0cc30ac3a907b392e463b8f2e2415f51 641 SUPERFAMILY SSF46689 583 631 5.38E-10 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS07040 0cc30ac3a907b392e463b8f2e2415f51 641 Pfam PF02954 Bacterial regulatory protein, Fis family 589 628 5.7E-13 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM393_RS07040 0cc30ac3a907b392e463b8f2e2415f51 641 Gene3D G3DSA:1.10.10.60 567 635 3.0E-14 T 28-03-2018 AM393_RS07040 0cc30ac3a907b392e463b8f2e2415f51 641 SMART SM00382 347 488 1.3E-7 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS07040 0cc30ac3a907b392e463b8f2e2415f51 641 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 410 425 - T 28-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AM393_RS07040 0cc30ac3a907b392e463b8f2e2415f51 641 Pfam PF01590 GAF domain 54 188 1.3E-5 T 28-03-2018 IPR003018 GAF domain GO:0005515 AM393_RS07040 0cc30ac3a907b392e463b8f2e2415f51 641 SUPERFAMILY SSF55781 58 197 9.81E-5 T 28-03-2018 IPR029016 GAF domain-like AM393_RS07040 0cc30ac3a907b392e463b8f2e2415f51 641 SUPERFAMILY SSF52540 331 567 8.57E-46 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS07040 0cc30ac3a907b392e463b8f2e2415f51 641 Gene3D G3DSA:3.30.450.20 191 304 1.2E-8 T 28-03-2018 AM393_RS11120 3d64e3950112369297065c44417d3657 119 ProDom PD076479 MEMBRANE INNER YIJD TRANSMEMBRANE Y0323 AAA SIMILAR A ACETYL-COENZYME VV0128 1 119 4.0E-56 T 28-03-2018 IPR009867 Protein of unknown function DUF1422 AM393_RS11120 3d64e3950112369297065c44417d3657 119 Pfam PF07226 Protein of unknown function (DUF1422) 4 114 2.9E-51 T 28-03-2018 IPR009867 Protein of unknown function DUF1422 AM393_RS02650 2b593d3045e2d0d2b3e58ae31dd5b1d9 613 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 2 610 6.6E-236 T 28-03-2018 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM393_RS02650 2b593d3045e2d0d2b3e58ae31dd5b1d9 613 Pfam PF00361 Proton-conducting membrane transporter 133 425 6.3E-98 T 28-03-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM393_RS02650 2b593d3045e2d0d2b3e58ae31dd5b1d9 613 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 58 82 8.0E-10 T 28-03-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 AM393_RS02650 2b593d3045e2d0d2b3e58ae31dd5b1d9 613 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 84 104 8.0E-10 T 28-03-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 AM393_RS02650 2b593d3045e2d0d2b3e58ae31dd5b1d9 613 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 358 380 8.0E-10 T 28-03-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 AM393_RS02650 2b593d3045e2d0d2b3e58ae31dd5b1d9 613 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 417 439 8.0E-10 T 28-03-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 AM393_RS02650 2b593d3045e2d0d2b3e58ae31dd5b1d9 613 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 247 273 9.5E-55 T 28-03-2018 AM393_RS02650 2b593d3045e2d0d2b3e58ae31dd5b1d9 613 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 110 130 9.5E-55 T 28-03-2018 AM393_RS02650 2b593d3045e2d0d2b3e58ae31dd5b1d9 613 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 157 178 9.5E-55 T 28-03-2018 AM393_RS02650 2b593d3045e2d0d2b3e58ae31dd5b1d9 613 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 225 246 9.5E-55 T 28-03-2018 AM393_RS02650 2b593d3045e2d0d2b3e58ae31dd5b1d9 613 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 418 437 9.5E-55 T 28-03-2018 AM393_RS02650 2b593d3045e2d0d2b3e58ae31dd5b1d9 613 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 82 107 9.5E-55 T 28-03-2018 AM393_RS02650 2b593d3045e2d0d2b3e58ae31dd5b1d9 613 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 315 327 9.5E-55 T 28-03-2018 AM393_RS02650 2b593d3045e2d0d2b3e58ae31dd5b1d9 613 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 64 121 7.3E-23 T 28-03-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM393_RS11035 63ea0a4fc885342255a662966f41aa83 302 Gene3D G3DSA:3.40.190.10 185 272 4.7E-14 T 28-03-2018 AM393_RS11035 63ea0a4fc885342255a662966f41aa83 302 SUPERFAMILY SSF46785 9 92 1.87E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS11035 63ea0a4fc885342255a662966f41aa83 302 Gene3D G3DSA:1.10.10.10 1 94 1.4E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS11035 63ea0a4fc885342255a662966f41aa83 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 70 2.2E-21 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS11035 63ea0a4fc885342255a662966f41aa83 302 Gene3D G3DSA:3.40.190.10 99 184 1.1E-13 T 28-03-2018 AM393_RS11035 63ea0a4fc885342255a662966f41aa83 302 Pfam PF03466 LysR substrate binding domain 100 289 3.1E-19 T 28-03-2018 IPR005119 LysR, substrate-binding AM393_RS11035 63ea0a4fc885342255a662966f41aa83 302 SUPERFAMILY SSF53850 101 289 6.15E-20 T 28-03-2018 AM393_RS11035 63ea0a4fc885342255a662966f41aa83 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 7.3E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS11035 63ea0a4fc885342255a662966f41aa83 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 7.3E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS11035 63ea0a4fc885342255a662966f41aa83 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 7.3E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS20170 87cb30be7ee8133db47c4c34047ed114 635 Gene3D G3DSA:3.40.50.300 6 78 5.0E-9 T 28-03-2018 AM393_RS20170 87cb30be7ee8133db47c4c34047ed114 635 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS20170 87cb30be7ee8133db47c4c34047ed114 635 Gene3D G3DSA:1.20.58.410 559 631 1.6E-7 T 28-03-2018 AM393_RS20170 87cb30be7ee8133db47c4c34047ed114 635 SUPERFAMILY SSF52540 311 501 5.25E-47 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS20170 87cb30be7ee8133db47c4c34047ed114 635 Pfam PF00005 ABC transporter 19 185 1.3E-21 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS20170 87cb30be7ee8133db47c4c34047ed114 635 Pfam PF00005 ABC transporter 336 469 2.5E-25 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS20170 87cb30be7ee8133db47c4c34047ed114 635 SUPERFAMILY SSF52540 9 239 5.24E-49 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS20170 87cb30be7ee8133db47c4c34047ed114 635 ProSitePatterns PS00211 ABC transporters family signature. 441 455 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS20170 87cb30be7ee8133db47c4c34047ed114 635 SMART SM00382 344 514 5.9E-13 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS20170 87cb30be7ee8133db47c4c34047ed114 635 SMART SM00382 28 230 1.5E-13 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS20170 87cb30be7ee8133db47c4c34047ed114 635 Pfam PF16326 ABC transporter C-terminal domain 561 629 1.7E-22 T 28-03-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 AM393_RS20170 87cb30be7ee8133db47c4c34047ed114 635 Gene3D G3DSA:3.40.50.300 89 290 4.4E-46 T 28-03-2018 AM393_RS20170 87cb30be7ee8133db47c4c34047ed114 635 Gene3D G3DSA:3.40.50.300 291 551 2.5E-58 T 28-03-2018 AM393_RS20170 87cb30be7ee8133db47c4c34047ed114 635 Pfam PF12848 ABC transporter 224 294 3.1E-11 T 28-03-2018 IPR032781 ABC-transporter extension domain AM393_RS11270 fcf2866384e6f8981c7d4cd0aeaa2e8b 421 Gene3D G3DSA:3.40.50.300 3 234 7.0E-51 T 28-03-2018 AM393_RS11270 fcf2866384e6f8981c7d4cd0aeaa2e8b 421 SUPERFAMILY SSF52540 84 363 1.26E-68 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS11270 fcf2866384e6f8981c7d4cd0aeaa2e8b 421 Gene3D G3DSA:3.40.50.300 235 420 1.4E-43 T 28-03-2018 AM393_RS11270 fcf2866384e6f8981c7d4cd0aeaa2e8b 421 Hamap MF_00661 ATP-dependent RNA helicase RhlB [rhlB]. 8 389 50.872 T 28-03-2018 IPR023554 ATP-dependent RNA helicase RhlB type GO:0004004 AM393_RS11270 fcf2866384e6f8981c7d4cd0aeaa2e8b 421 SMART SM00487 28 234 3.4E-52 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AM393_RS11270 fcf2866384e6f8981c7d4cd0aeaa2e8b 421 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 163 171 - T 28-03-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AM393_RS11270 fcf2866384e6f8981c7d4cd0aeaa2e8b 421 SMART SM00490 270 351 1.7E-30 T 28-03-2018 IPR001650 Helicase, C-terminal AM393_RS11270 fcf2866384e6f8981c7d4cd0aeaa2e8b 421 Pfam PF00270 DEAD/DEAH box helicase 33 206 7.2E-45 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AM393_RS11270 fcf2866384e6f8981c7d4cd0aeaa2e8b 421 Pfam PF00271 Helicase conserved C-terminal domain 243 351 1.8E-28 T 28-03-2018 IPR001650 Helicase, C-terminal AM393_RS24980 de7643ea934cf0c226bc9ab58fbf8822 522 SUPERFAMILY SSF48208 219 520 3.09E-32 T 28-03-2018 IPR008928 Six-hairpin glycosidase-like GO:0003824 AM393_RS24980 de7643ea934cf0c226bc9ab58fbf8822 522 Pfam PF17389 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain 195 517 1.1E-20 T 28-03-2018 IPR035396 Alpha-L-rhamnosidase, six-hairpin glycosidase domain AM393_RS24980 de7643ea934cf0c226bc9ab58fbf8822 522 Gene3D G3DSA:1.50.10.10 192 520 2.4E-40 T 28-03-2018 AM393_RS24980 de7643ea934cf0c226bc9ab58fbf8822 522 Gene3D G3DSA:2.60.120.260 21 179 6.7E-4 T 28-03-2018 IPR008979 Galactose-binding domain-like AM393_RS07925 5124fa19b5f7e6749b67c5b6e07c96f1 449 SUPERFAMILY SSF52440 1 113 1.15E-46 T 28-03-2018 IPR016185 Pre-ATP-grasp domain AM393_RS07925 5124fa19b5f7e6749b67c5b6e07c96f1 449 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 8.9E-38 T 28-03-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AM393_RS07925 5124fa19b5f7e6749b67c5b6e07c96f1 449 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AM393_RS07925 5124fa19b5f7e6749b67c5b6e07c96f1 449 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 323 2.1E-85 T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AM393_RS07925 5124fa19b5f7e6749b67c5b6e07c96f1 449 SUPERFAMILY SSF51246 331 444 1.78E-43 T 28-03-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 AM393_RS07925 5124fa19b5f7e6749b67c5b6e07c96f1 449 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 447 6.5E-250 T 28-03-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 AM393_RS07925 5124fa19b5f7e6749b67c5b6e07c96f1 449 SMART SM00878 336 441 4.1E-64 T 28-03-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AM393_RS07925 5124fa19b5f7e6749b67c5b6e07c96f1 449 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 7.2E-44 T 28-03-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AM393_RS07925 5124fa19b5f7e6749b67c5b6e07c96f1 449 Gene3D G3DSA:3.30.1490.20 124 209 3.7E-20 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AM393_RS07925 5124fa19b5f7e6749b67c5b6e07c96f1 449 SUPERFAMILY SSF56059 83 347 1.77E-69 T 28-03-2018 AM393_RS07925 5124fa19b5f7e6749b67c5b6e07c96f1 449 Gene3D G3DSA:3.30.470.20 210 444 4.4E-96 T 28-03-2018 AM393_RS07925 5124fa19b5f7e6749b67c5b6e07c96f1 449 Gene3D G3DSA:3.40.50.20 1 123 1.2E-51 T 28-03-2018 AM393_RS07925 5124fa19b5f7e6749b67c5b6e07c96f1 449 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AM393_RS02100 8a405361c95623bb70dffe1bac930792 244 SUPERFAMILY SSF53335 6 233 3.22E-40 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM393_RS02100 8a405361c95623bb70dffe1bac930792 244 Pfam PF08241 Methyltransferase domain 47 141 3.3E-21 T 28-03-2018 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 AM393_RS02100 8a405361c95623bb70dffe1bac930792 244 Gene3D G3DSA:3.40.50.150 26 242 1.6E-47 T 28-03-2018 AM393_RS20850 ca102f9ac252db613b7f18dca654cf26 211 Pfam PF00440 Bacterial regulatory proteins, tetR family 25 70 1.5E-14 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM393_RS20850 ca102f9ac252db613b7f18dca654cf26 211 Gene3D G3DSA:1.10.10.60 9 70 4.1E-19 T 28-03-2018 AM393_RS20850 ca102f9ac252db613b7f18dca654cf26 211 SUPERFAMILY SSF48498 92 206 2.64E-29 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AM393_RS20850 ca102f9ac252db613b7f18dca654cf26 211 Gene3D G3DSA:1.10.357.10 71 204 1.9E-23 T 28-03-2018 AM393_RS20850 ca102f9ac252db613b7f18dca654cf26 211 SUPERFAMILY SSF46689 12 84 1.49E-16 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS07765 f48eb5c1ac4302c3c0d7e490c35d4ea2 212 SUPERFAMILY SSF47616 82 208 1.71E-27 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like AM393_RS07765 f48eb5c1ac4302c3c0d7e490c35d4ea2 212 Gene3D G3DSA:3.40.30.10 1 88 2.7E-24 T 28-03-2018 AM393_RS07765 f48eb5c1ac4302c3c0d7e490c35d4ea2 212 Pfam PF00043 Glutathione S-transferase, C-terminal domain 103 194 4.7E-12 T 28-03-2018 IPR004046 Glutathione S-transferase, C-terminal AM393_RS07765 f48eb5c1ac4302c3c0d7e490c35d4ea2 212 SUPERFAMILY SSF52833 7 90 2.76E-23 T 28-03-2018 IPR012336 Thioredoxin-like fold AM393_RS07765 f48eb5c1ac4302c3c0d7e490c35d4ea2 212 Pfam PF02798 Glutathione S-transferase, N-terminal domain 10 81 5.6E-20 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AM393_RS07765 f48eb5c1ac4302c3c0d7e490c35d4ea2 212 Gene3D G3DSA:1.20.1050.10 89 209 3.0E-17 T 28-03-2018 AM393_RS07890 f939becbaaf4929805ec5648a0e4c917 646 SMART SM00052 395 635 6.4E-43 T 28-03-2018 IPR001633 EAL domain AM393_RS07890 f939becbaaf4929805ec5648a0e4c917 646 Gene3D G3DSA:3.30.70.270 218 388 4.7E-23 T 28-03-2018 AM393_RS07890 f939becbaaf4929805ec5648a0e4c917 646 SUPERFAMILY SSF55073 230 387 6.43E-20 T 28-03-2018 IPR029787 Nucleotide cyclase AM393_RS07890 f939becbaaf4929805ec5648a0e4c917 646 SUPERFAMILY SSF141868 403 642 4.05E-33 T 28-03-2018 IPR001633 EAL domain AM393_RS07890 f939becbaaf4929805ec5648a0e4c917 646 Gene3D G3DSA:3.20.20.450 389 645 1.4E-40 T 28-03-2018 IPR001633 EAL domain AM393_RS07890 f939becbaaf4929805ec5648a0e4c917 646 Pfam PF00990 Diguanylate cyclase, GGDEF domain 224 380 9.0E-26 T 28-03-2018 IPR000160 GGDEF domain AM393_RS07890 f939becbaaf4929805ec5648a0e4c917 646 SMART SM00267 213 385 1.7E-28 T 28-03-2018 IPR000160 GGDEF domain AM393_RS07890 f939becbaaf4929805ec5648a0e4c917 646 Pfam PF00563 EAL domain 403 628 7.6E-34 T 28-03-2018 IPR001633 EAL domain AM393_RS07890 f939becbaaf4929805ec5648a0e4c917 646 Pfam PF17157 Gammaproteobacterial periplasmic sensor domain 34 130 1.5E-30 T 28-03-2018 IPR033423 Gammaproteobacterial periplasmic sensor domain GAPES4 AM393_RS24390 51b4936c63bbd31251476fef519a49ad 247 SUPERFAMILY SSF51735 2 235 3.82E-39 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS24390 51b4936c63bbd31251476fef519a49ad 247 Pfam PF00106 short chain dehydrogenase 5 196 1.8E-31 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS24390 51b4936c63bbd31251476fef519a49ad 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 9.3E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS24390 51b4936c63bbd31251476fef519a49ad 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 9.3E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS24390 51b4936c63bbd31251476fef519a49ad 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 9.3E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS24390 51b4936c63bbd31251476fef519a49ad 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 9.3E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS24390 51b4936c63bbd31251476fef519a49ad 247 Gene3D G3DSA:3.40.50.720 1 222 9.1E-35 T 28-03-2018 AM393_RS13665 aac0cd506d5caaa4b1f153e69daae4e6 227 SUPERFAMILY SSF46894 126 223 9.35E-29 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM393_RS13665 aac0cd506d5caaa4b1f153e69daae4e6 227 Gene3D G3DSA:3.40.50.2300 1 121 1.1E-31 T 28-03-2018 AM393_RS13665 aac0cd506d5caaa4b1f153e69daae4e6 227 Pfam PF00072 Response regulator receiver domain 3 113 4.2E-27 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM393_RS13665 aac0cd506d5caaa4b1f153e69daae4e6 227 TIGRFAM TIGR01387 cztR_silR_copR: heavy metal response regulator 3 221 1.1E-97 T 28-03-2018 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response GO:0003677|GO:0006355 AM393_RS13665 aac0cd506d5caaa4b1f153e69daae4e6 227 SUPERFAMILY SSF52172 2 118 2.99E-38 T 28-03-2018 IPR011006 CheY-like superfamily AM393_RS13665 aac0cd506d5caaa4b1f153e69daae4e6 227 SMART SM00862 146 221 4.1E-25 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM393_RS13665 aac0cd506d5caaa4b1f153e69daae4e6 227 SMART SM00448 1 112 4.2E-38 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM393_RS13665 aac0cd506d5caaa4b1f153e69daae4e6 227 Gene3D G3DSA:1.10.10.10 122 227 3.8E-30 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS13665 aac0cd506d5caaa4b1f153e69daae4e6 227 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 221 4.8E-26 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM393_RS16115 8cee7321e59c3d8b1009c7a102d3177b 269 PIRSF PIRSF000193 2 269 2.5E-98 T 28-03-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 AM393_RS16115 8cee7321e59c3d8b1009c7a102d3177b 269 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 4 99 1.9E-24 T 28-03-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal AM393_RS16115 8cee7321e59c3d8b1009c7a102d3177b 269 Gene3D G3DSA:1.10.3730.10 161 269 1.5E-43 T 28-03-2018 AM393_RS16115 8cee7321e59c3d8b1009c7a102d3177b 269 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 222 244 - T 28-03-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 AM393_RS16115 8cee7321e59c3d8b1009c7a102d3177b 269 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 163 266 3.8E-38 T 28-03-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 AM393_RS16115 8cee7321e59c3d8b1009c7a102d3177b 269 SUPERFAMILY SSF51735 3 157 3.58E-38 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS16115 8cee7321e59c3d8b1009c7a102d3177b 269 SUPERFAMILY SSF48179 162 268 4.59E-37 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AM393_RS16115 8cee7321e59c3d8b1009c7a102d3177b 269 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 5 266 1.3E-93 T 28-03-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 AM393_RS16115 8cee7321e59c3d8b1009c7a102d3177b 269 Gene3D G3DSA:3.40.50.720 1 160 4.3E-36 T 28-03-2018 AM393_RS16115 8cee7321e59c3d8b1009c7a102d3177b 269 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 3 266 27.291 T 28-03-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 AM393_RS03800 9c19237c86be5253cda50ba063d17084 318 PIRSF PIRSF005427 1 318 2.7E-94 T 28-03-2018 IPR005588 MucB/RseB AM393_RS03800 9c19237c86be5253cda50ba063d17084 318 Pfam PF17188 MucB/RseB C-terminal domain 218 313 1.0E-27 T 28-03-2018 IPR033436 MucB/RseB, C-terminal AM393_RS03800 9c19237c86be5253cda50ba063d17084 318 Pfam PF03888 MucB/RseB N-terminal domain 28 207 6.7E-60 T 28-03-2018 IPR033434 MucB/RseB, N-terminal AM393_RS03800 9c19237c86be5253cda50ba063d17084 318 Gene3D G3DSA:2.50.20.10 19 287 4.7E-21 T 28-03-2018 AM393_RS26705 e6e0f79b7f48c06c385891676b60666d 147 SUPERFAMILY SSF46785 4 65 8.99E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS26705 e6e0f79b7f48c06c385891676b60666d 147 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 5 21 1.2E-14 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AM393_RS26705 e6e0f79b7f48c06c385891676b60666d 147 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 21 32 1.2E-14 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AM393_RS26705 e6e0f79b7f48c06c385891676b60666d 147 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 32 51 1.2E-14 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AM393_RS26705 e6e0f79b7f48c06c385891676b60666d 147 SMART SM00344 5 111 4.7E-27 T 28-03-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AM393_RS26705 e6e0f79b7f48c06c385891676b60666d 147 Pfam PF01037 Lrp/AsnC ligand binding domain 72 136 4.6E-11 T 28-03-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AM393_RS26705 e6e0f79b7f48c06c385891676b60666d 147 Pfam PF13412 Winged helix-turn-helix DNA-binding 5 52 1.1E-14 T 28-03-2018 AM393_RS26705 e6e0f79b7f48c06c385891676b60666d 147 Gene3D G3DSA:3.30.70.920 55 143 7.2E-15 T 28-03-2018 AM393_RS26705 e6e0f79b7f48c06c385891676b60666d 147 Gene3D G3DSA:1.10.10.10 5 54 1.3E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS26705 e6e0f79b7f48c06c385891676b60666d 147 SUPERFAMILY SSF54909 67 140 6.17E-13 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel AM393_RS14540 9288f0693c005fcc0e9a42f6cc16d04d 273 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 154 171 - T 28-03-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AM393_RS14540 9288f0693c005fcc0e9a42f6cc16d04d 273 Gene3D G3DSA:3.30.360.10 130 238 7.5E-35 T 28-03-2018 AM393_RS14540 9288f0693c005fcc0e9a42f6cc16d04d 273 PIRSF PIRSF000161 4 272 2.4E-91 T 28-03-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AM393_RS14540 9288f0693c005fcc0e9a42f6cc16d04d 273 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 6 269 5.0E-112 T 28-03-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AM393_RS14540 9288f0693c005fcc0e9a42f6cc16d04d 273 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 6 129 5.0E-42 T 28-03-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AM393_RS14540 9288f0693c005fcc0e9a42f6cc16d04d 273 Gene3D G3DSA:3.40.50.720 1 125 5.1E-29 T 28-03-2018 AM393_RS14540 9288f0693c005fcc0e9a42f6cc16d04d 273 SUPERFAMILY SSF51735 4 130 8.01E-53 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS14540 9288f0693c005fcc0e9a42f6cc16d04d 273 SUPERFAMILY SSF51735 240 271 8.01E-53 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS14540 9288f0693c005fcc0e9a42f6cc16d04d 273 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 6 269 35.463 T 28-03-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AM393_RS14540 9288f0693c005fcc0e9a42f6cc16d04d 273 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 132 268 5.1E-43 T 28-03-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AM393_RS14540 9288f0693c005fcc0e9a42f6cc16d04d 273 SUPERFAMILY SSF55347 131 240 2.05E-37 T 28-03-2018 AM393_RS00635 f10ed7407d356b4bc84a876a1dea577d 491 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 9 489 90.194 T 28-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AM393_RS00635 f10ed7407d356b4bc84a876a1dea577d 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 218 235 3.5E-47 T 28-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AM393_RS00635 f10ed7407d356b4bc84a876a1dea577d 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 166 194 3.5E-47 T 28-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AM393_RS00635 f10ed7407d356b4bc84a876a1dea577d 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 142 155 3.5E-47 T 28-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AM393_RS00635 f10ed7407d356b4bc84a876a1dea577d 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 327 353 3.5E-47 T 28-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AM393_RS00635 f10ed7407d356b4bc84a876a1dea577d 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 236 252 3.5E-47 T 28-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AM393_RS00635 f10ed7407d356b4bc84a876a1dea577d 491 PIRSF PIRSF000110 1 491 2.3E-179 T 28-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AM393_RS00635 f10ed7407d356b4bc84a876a1dea577d 491 SUPERFAMILY SSF55347 176 488 3.6E-112 T 28-03-2018 AM393_RS00635 f10ed7407d356b4bc84a876a1dea577d 491 Gene3D G3DSA:3.40.50.720 7 187 5.6E-61 T 28-03-2018 AM393_RS00635 f10ed7407d356b4bc84a876a1dea577d 491 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 188 488 9.6E-116 T 28-03-2018 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AM393_RS00635 f10ed7407d356b4bc84a876a1dea577d 491 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 9 489 1.9E-203 T 28-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AM393_RS00635 f10ed7407d356b4bc84a876a1dea577d 491 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 176 182 - T 28-03-2018 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AM393_RS00635 f10ed7407d356b4bc84a876a1dea577d 491 SUPERFAMILY SSF51735 4 189 2.46E-56 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS00635 f10ed7407d356b4bc84a876a1dea577d 491 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 13 186 8.8E-57 T 28-03-2018 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AM393_RS00635 f10ed7407d356b4bc84a876a1dea577d 491 Gene3D G3DSA:3.30.360.10 188 490 1.1E-125 T 28-03-2018 AM393_RS09855 b8a61896141957d727989247b7004f1b 81 SUPERFAMILY SSF47661 8 79 2.43E-5 T 28-03-2018 IPR010989 SNARE GO:0016020|GO:0016192 AM393_RS09855 b8a61896141957d727989247b7004f1b 81 Hamap MF_01196 Cell division protein ZapB [zapB]. 3 81 18.505 T 28-03-2018 IPR009252 Cell division protein ZapB GO:0005737|GO:0043093|GO:0090529 AM393_RS09855 b8a61896141957d727989247b7004f1b 81 Gene3D G3DSA:1.20.5.370 15 47 8.7E-13 T 28-03-2018 AM393_RS09855 b8a61896141957d727989247b7004f1b 81 Gene3D G3DSA:1.20.5.370 48 81 2.1E-10 T 28-03-2018 AM393_RS09855 b8a61896141957d727989247b7004f1b 81 Pfam PF06005 Cell division protein ZapB 3 80 5.4E-26 T 28-03-2018 IPR009252 Cell division protein ZapB GO:0005737|GO:0043093|GO:0090529 AM393_RS16785 dd03a0b20ff929ed795d066e00fede19 406 Gene3D G3DSA:1.20.1250.20 220 406 6.4E-25 T 28-03-2018 AM393_RS16785 dd03a0b20ff929ed795d066e00fede19 406 Gene3D G3DSA:1.20.1250.20 20 211 7.7E-20 T 28-03-2018 AM393_RS16785 dd03a0b20ff929ed795d066e00fede19 406 SUPERFAMILY SSF103473 1 400 1.7E-56 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS16785 dd03a0b20ff929ed795d066e00fede19 406 Pfam PF07690 Major Facilitator Superfamily 31 355 5.8E-32 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS26075 ea375eec1f67b9422fb4bec506e3a2d8 130 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 123 8.0E-5 T 28-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AM393_RS26075 ea375eec1f67b9422fb4bec506e3a2d8 130 SUPERFAMILY SSF54593 2 127 9.63E-20 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM393_RS26075 ea375eec1f67b9422fb4bec506e3a2d8 130 Gene3D G3DSA:3.10.180.10 1 130 1.7E-17 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM393_RS05775 0b0d2921d95824290a7206791f5d9bc2 97 Pfam PF03795 YCII-related domain 6 84 8.4E-13 T 28-03-2018 IPR005545 YCII-related AM393_RS05775 0b0d2921d95824290a7206791f5d9bc2 97 Gene3D G3DSA:3.30.70.1060 1 88 2.9E-15 T 28-03-2018 AM393_RS05775 0b0d2921d95824290a7206791f5d9bc2 97 SUPERFAMILY SSF54909 3 85 2.55E-18 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel AM393_RS04440 25d44ea969ea5a1855c21797747ad579 359 TIGRFAM TIGR02282 MltB: lytic murein transglycosylase B 61 351 1.8E-123 T 28-03-2018 IPR011757 Lytic transglycosylase MltB AM393_RS04440 25d44ea969ea5a1855c21797747ad579 359 Gene3D G3DSA:1.10.8.350 51 127 3.6E-9 T 28-03-2018 AM393_RS04440 25d44ea969ea5a1855c21797747ad579 359 Gene3D G3DSA:1.10.8.350 128 232 5.0E-36 T 28-03-2018 AM393_RS04440 25d44ea969ea5a1855c21797747ad579 359 SUPERFAMILY SSF53955 45 354 3.23E-97 T 28-03-2018 IPR023346 Lysozyme-like domain AM393_RS04440 25d44ea969ea5a1855c21797747ad579 359 Pfam PF13406 Transglycosylase SLT domain 56 349 4.0E-91 T 28-03-2018 IPR031304 Transglycosylase SLT domain 2 AM393_RS04440 25d44ea969ea5a1855c21797747ad579 359 Gene3D G3DSA:1.10.530.10 238 358 9.2E-34 T 28-03-2018 AM393_RS17880 109cdeeba1d29d2c337df1109fc3bc2b 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 14 27 4.1E-6 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM393_RS17880 109cdeeba1d29d2c337df1109fc3bc2b 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 4.1E-6 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM393_RS17880 109cdeeba1d29d2c337df1109fc3bc2b 195 Gene3D G3DSA:1.10.357.10 67 193 2.7E-10 T 28-03-2018 AM393_RS17880 109cdeeba1d29d2c337df1109fc3bc2b 195 SUPERFAMILY SSF46689 6 81 2.31E-17 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS17880 109cdeeba1d29d2c337df1109fc3bc2b 195 SUPERFAMILY SSF48498 82 191 4.54E-17 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AM393_RS17880 109cdeeba1d29d2c337df1109fc3bc2b 195 Gene3D G3DSA:1.10.10.60 6 44 1.3E-14 T 28-03-2018 AM393_RS17880 109cdeeba1d29d2c337df1109fc3bc2b 195 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 59 7.9E-14 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM393_RS17880 109cdeeba1d29d2c337df1109fc3bc2b 195 Gene3D G3DSA:1.10.260.40 45 66 1.0E-9 T 28-03-2018 AM393_RS17880 109cdeeba1d29d2c337df1109fc3bc2b 195 Pfam PF13977 BetI-type transcriptional repressor, C-terminal 86 192 4.3E-29 T 28-03-2018 AM393_RS17880 109cdeeba1d29d2c337df1109fc3bc2b 195 ProSitePatterns PS01081 TetR-type HTH domain signature. 26 57 - T 28-03-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AM393_RS17880 109cdeeba1d29d2c337df1109fc3bc2b 195 Hamap MF_00768 HTH-type transcriptional regulator BetI [betI]. 1 195 103.791 T 28-03-2018 IPR017757 Transcriptional repressor BetI AM393_RS17880 109cdeeba1d29d2c337df1109fc3bc2b 195 TIGRFAM TIGR03384 betaine_BetI: transcriptional repressor BetI 2 192 1.2E-79 T 28-03-2018 IPR017757 Transcriptional repressor BetI AM393_RS19660 91f124e8cb2a865ebec21ed4b58f085c 561 SUPERFAMILY SSF116726 227 282 2.88E-10 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AM393_RS19660 91f124e8cb2a865ebec21ed4b58f085c 561 Pfam PF02080 TrkA-C domain 227 281 6.0E-8 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AM393_RS19660 91f124e8cb2a865ebec21ed4b58f085c 561 Pfam PF02080 TrkA-C domain 305 371 1.8E-8 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AM393_RS19660 91f124e8cb2a865ebec21ed4b58f085c 561 Gene3D G3DSA:3.30.70.1450 295 375 5.5E-9 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AM393_RS19660 91f124e8cb2a865ebec21ed4b58f085c 561 Hamap MF_01015 Putative transport protein YbjL [ybjL]. 1 557 57.34 T 28-03-2018 IPR023017 Transport protein YbjL, putative AM393_RS19660 91f124e8cb2a865ebec21ed4b58f085c 561 Pfam PF06826 Predicted Permease Membrane Region 17 181 3.4E-40 T 28-03-2018 IPR006512 YidE/YbjL duplication AM393_RS19660 91f124e8cb2a865ebec21ed4b58f085c 561 Pfam PF06826 Predicted Permease Membrane Region 385 554 3.0E-42 T 28-03-2018 IPR006512 YidE/YbjL duplication AM393_RS19660 91f124e8cb2a865ebec21ed4b58f085c 561 SUPERFAMILY SSF116726 291 374 3.4E-11 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AM393_RS19660 91f124e8cb2a865ebec21ed4b58f085c 561 Gene3D G3DSA:3.30.70.1450 215 291 1.8E-9 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AM393_RS19660 91f124e8cb2a865ebec21ed4b58f085c 561 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 21 168 3.4E-38 T 28-03-2018 IPR006512 YidE/YbjL duplication AM393_RS19660 91f124e8cb2a865ebec21ed4b58f085c 561 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 391 541 5.6E-45 T 28-03-2018 IPR006512 YidE/YbjL duplication AM393_RS13685 f2a2ce090baf7c197f04dce0cb364df6 373 SMART SM00558 92 215 3.0E-6 T 28-03-2018 IPR003347 JmjC domain AM393_RS13685 f2a2ce090baf7c197f04dce0cb364df6 373 SUPERFAMILY SSF51197 6 292 3.71E-72 T 28-03-2018 AM393_RS13685 f2a2ce090baf7c197f04dce0cb364df6 373 Gene3D G3DSA:2.60.120.650 4 206 3.3E-25 T 28-03-2018 AM393_RS13685 f2a2ce090baf7c197f04dce0cb364df6 373 Pfam PF08007 Cupin superfamily protein 10 310 2.3E-100 T 28-03-2018 IPR003347 JmjC domain AM393_RS18525 4c8acc9adf270c6bb085bcfae48d31f4 150 SUPERFAMILY SSF46785 6 134 1.45E-44 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS18525 4c8acc9adf270c6bb085bcfae48d31f4 150 Gene3D G3DSA:1.10.10.10 4 88 1.4E-28 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS18525 4c8acc9adf270c6bb085bcfae48d31f4 150 Pfam PF01475 Ferric uptake regulator family 10 130 9.7E-48 T 28-03-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 AM393_RS18340 b898fddeb40b9d7800877ded33655d4c 213 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 3 213 29.939 T 28-03-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 AM393_RS18340 b898fddeb40b9d7800877ded33655d4c 213 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 7 212 7.0E-59 T 28-03-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 AM393_RS18340 b898fddeb40b9d7800877ded33655d4c 213 SUPERFAMILY SSF52374 4 212 1.45E-59 T 28-03-2018 AM393_RS18340 b898fddeb40b9d7800877ded33655d4c 213 Gene3D G3DSA:3.40.50.620 2 213 1.3E-55 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM393_RS18340 b898fddeb40b9d7800877ded33655d4c 213 Pfam PF01467 Cytidylyltransferase-like 7 187 1.3E-37 T 28-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AM393_RS18340 b898fddeb40b9d7800877ded33655d4c 213 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 6 68 4.4E-12 T 28-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AM393_RS23635 509ce8fabd800a717066c1a84ba2aff7 160 SUPERFAMILY SSF141452 3 160 1.29E-34 T 28-03-2018 IPR008514 Type VI secretion system effector, Hcp AM393_RS23635 509ce8fabd800a717066c1a84ba2aff7 160 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 155 8.3E-38 T 28-03-2018 IPR008514 Type VI secretion system effector, Hcp AM393_RS23635 509ce8fabd800a717066c1a84ba2aff7 160 Pfam PF05638 Type VI secretion system effector, Hcp 6 142 2.4E-27 T 28-03-2018 IPR008514 Type VI secretion system effector, Hcp AM393_RS23635 509ce8fabd800a717066c1a84ba2aff7 160 Gene3D G3DSA:2.30.110.20 1 159 4.6E-41 T 28-03-2018 IPR008514 Type VI secretion system effector, Hcp AM393_RS09650 1c0cb13a37cd3c7ec29768ef1f9202fc 320 SUPERFAMILY SSF88713 29 234 5.84E-13 T 28-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AM393_RS09650 1c0cb13a37cd3c7ec29768ef1f9202fc 320 Gene3D G3DSA:3.20.20.370 2 319 2.1E-27 T 28-03-2018 AM393_RS17995 01be2df34c3fc6f8e49278c7574cf719 1293 Gene3D G3DSA:3.40.50.980 453 605 2.3E-43 T 28-03-2018 AM393_RS17995 01be2df34c3fc6f8e49278c7574cf719 1293 Gene3D G3DSA:1.10.1200.10 980 1054 3.2E-17 T 28-03-2018 AM393_RS17995 01be2df34c3fc6f8e49278c7574cf719 1293 Pfam PF00501 AMP-binding enzyme 462 862 2.1E-98 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AM393_RS17995 01be2df34c3fc6f8e49278c7574cf719 1293 Gene3D G3DSA:3.30.300.30 857 979 2.7E-28 T 28-03-2018 AM393_RS17995 01be2df34c3fc6f8e49278c7574cf719 1293 Pfam PF00550 Phosphopantetheine attachment site 979 1041 3.1E-11 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain AM393_RS17995 01be2df34c3fc6f8e49278c7574cf719 1293 Gene3D G3DSA:3.30.559.10 2 212 1.5E-17 T 28-03-2018 AM393_RS17995 01be2df34c3fc6f8e49278c7574cf719 1293 SUPERFAMILY SSF53474 1050 1292 3.52E-46 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AM393_RS17995 01be2df34c3fc6f8e49278c7574cf719 1293 SMART SM00824 Thioesterase 1070 1292 1.2E-4 T 28-03-2018 IPR020802 Polyketide synthase, thioesterase domain GO:0009058|GO:0016788 AM393_RS17995 01be2df34c3fc6f8e49278c7574cf719 1293 Pfam PF00668 Condensation domain 3 442 1.9E-86 T 28-03-2018 IPR001242 Condensation domain AM393_RS17995 01be2df34c3fc6f8e49278c7574cf719 1293 Pfam PF13193 AMP-binding enzyme C-terminal domain 883 951 1.4E-5 T 28-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain AM393_RS17995 01be2df34c3fc6f8e49278c7574cf719 1293 ProSitePatterns PS00455 Putative AMP-binding domain signature. 600 611 - T 28-03-2018 IPR020845 AMP-binding, conserved site AM393_RS17995 01be2df34c3fc6f8e49278c7574cf719 1293 SUPERFAMILY SSF47336 970 1041 9.16E-13 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain AM393_RS17995 01be2df34c3fc6f8e49278c7574cf719 1293 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 482 885 6.0E-128 T 28-03-2018 IPR010071 Amino acid adenylation domain AM393_RS17995 01be2df34c3fc6f8e49278c7574cf719 1293 Pfam PF00975 Thioesterase domain 1068 1283 2.6E-47 T 28-03-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 AM393_RS17995 01be2df34c3fc6f8e49278c7574cf719 1293 SUPERFAMILY SSF52777 9 183 6.89E-30 T 28-03-2018 AM393_RS17995 01be2df34c3fc6f8e49278c7574cf719 1293 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1000 1015 - T 28-03-2018 IPR006162 Phosphopantetheine attachment site AM393_RS17995 01be2df34c3fc6f8e49278c7574cf719 1293 Gene3D G3DSA:3.40.50.1820 1055 1293 8.6E-19 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AM393_RS17995 01be2df34c3fc6f8e49278c7574cf719 1293 SUPERFAMILY SSF52777 190 426 2.11E-33 T 28-03-2018 AM393_RS17995 01be2df34c3fc6f8e49278c7574cf719 1293 Gene3D G3DSA:2.30.38.10 772 852 8.2E-23 T 28-03-2018 AM393_RS17995 01be2df34c3fc6f8e49278c7574cf719 1293 SMART SM00823 Phosphopantetheine attachment site 976 1045 3.2E-4 T 28-03-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 AM393_RS17995 01be2df34c3fc6f8e49278c7574cf719 1293 Gene3D G3DSA:3.40.50.980 606 765 4.5E-43 T 28-03-2018 AM393_RS17995 01be2df34c3fc6f8e49278c7574cf719 1293 SUPERFAMILY SSF56801 422 977 6.8E-147 T 28-03-2018 AM393_RS16390 b13ed3ffa89aaed9723d853c72473b5f 565 Pfam PF00890 FAD binding domain 8 540 1.7E-102 T 28-03-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM393_RS16390 b13ed3ffa89aaed9723d853c72473b5f 565 SUPERFAMILY SSF51905 1 59 1.43E-40 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS16390 b13ed3ffa89aaed9723d853c72473b5f 565 SUPERFAMILY SSF51905 87 147 1.43E-40 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS16390 b13ed3ffa89aaed9723d853c72473b5f 565 SUPERFAMILY SSF51905 217 312 1.43E-40 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS16390 b13ed3ffa89aaed9723d853c72473b5f 565 SUPERFAMILY SSF51905 493 556 1.43E-40 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS16390 b13ed3ffa89aaed9723d853c72473b5f 565 Gene3D G3DSA:3.50.50.60 5 381 3.8E-51 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS16390 b13ed3ffa89aaed9723d853c72473b5f 565 Gene3D G3DSA:3.50.50.60 382 556 1.9E-15 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS16390 b13ed3ffa89aaed9723d853c72473b5f 565 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 515 530 2.2E-7 T 28-03-2018 AM393_RS16390 b13ed3ffa89aaed9723d853c72473b5f 565 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 2.2E-7 T 28-03-2018 AM393_RS16390 b13ed3ffa89aaed9723d853c72473b5f 565 SUPERFAMILY SSF56425 318 499 1.33E-32 T 28-03-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM393_RS26055 87ed3654e4bc789c73ae1797f2e79181 385 Pfam PF07687 Peptidase dimerisation domain 181 274 2.5E-13 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain AM393_RS26055 87ed3654e4bc789c73ae1797f2e79181 385 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 12 366 2.8E-104 T 28-03-2018 IPR017439 Amidohydrolase GO:0016787 AM393_RS26055 87ed3654e4bc789c73ae1797f2e79181 385 SUPERFAMILY SSF53187 294 381 4.4E-86 T 28-03-2018 AM393_RS26055 87ed3654e4bc789c73ae1797f2e79181 385 SUPERFAMILY SSF53187 6 193 4.4E-86 T 28-03-2018 AM393_RS26055 87ed3654e4bc789c73ae1797f2e79181 385 SUPERFAMILY SSF55031 179 292 8.11E-30 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain AM393_RS26055 87ed3654e4bc789c73ae1797f2e79181 385 Pfam PF01546 Peptidase family M20/M25/M40 69 379 5.9E-31 T 28-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 AM393_RS26055 87ed3654e4bc789c73ae1797f2e79181 385 Gene3D G3DSA:3.40.630.10 235 384 2.2E-19 T 28-03-2018 AM393_RS26055 87ed3654e4bc789c73ae1797f2e79181 385 Gene3D G3DSA:3.40.630.10 4 218 3.5E-50 T 28-03-2018 AM393_RS26055 87ed3654e4bc789c73ae1797f2e79181 385 PIRSF PIRSF005962 2 384 3.8E-126 T 28-03-2018 IPR017439 Amidohydrolase GO:0016787 AM393_RS10230 77ae91e6708cbe0a57a6be69e184582a 394 Gene3D G3DSA:1.20.1250.20 1 194 3.6E-30 T 28-03-2018 AM393_RS10230 77ae91e6708cbe0a57a6be69e184582a 394 Pfam PF07690 Major Facilitator Superfamily 14 349 5.0E-38 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS10230 77ae91e6708cbe0a57a6be69e184582a 394 SUPERFAMILY SSF103473 4 385 1.83E-54 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS10230 77ae91e6708cbe0a57a6be69e184582a 394 Gene3D G3DSA:1.20.1250.20 195 391 5.1E-5 T 28-03-2018 AM393_RS13770 e61776c17015395ed5086630b1629e5c 470 Gene3D G3DSA:1.10.10.10 1 70 5.2E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS13770 e61776c17015395ed5086630b1629e5c 470 Pfam PF00155 Aminotransferase class I and II 120 455 4.3E-35 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AM393_RS13770 e61776c17015395ed5086630b1629e5c 470 SUPERFAMILY SSF46785 1 70 4.82E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS13770 e61776c17015395ed5086630b1629e5c 470 SUPERFAMILY SSF53383 60 465 5.78E-93 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM393_RS13770 e61776c17015395ed5086630b1629e5c 470 Gene3D G3DSA:3.40.640.10 122 370 1.5E-48 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM393_RS13770 e61776c17015395ed5086630b1629e5c 470 SMART SM00345 7 66 2.6E-21 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM393_RS13770 e61776c17015395ed5086630b1629e5c 470 Pfam PF00392 Bacterial regulatory proteins, gntR family 4 66 2.1E-15 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM393_RS13770 e61776c17015395ed5086630b1629e5c 470 Gene3D G3DSA:3.90.1150.10 371 469 5.3E-23 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM393_RS01220 e5d216983ee6e7dba810f785e9767e36 420 Pfam PF13356 Arm DNA-binding domain 3 87 1.3E-17 T 28-03-2018 IPR025166 Integrase, DNA-binding domain AM393_RS01220 e5d216983ee6e7dba810f785e9767e36 420 Gene3D G3DSA:1.10.443.10 201 398 5.4E-22 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM393_RS01220 e5d216983ee6e7dba810f785e9767e36 420 Pfam PF00589 Phage integrase family 225 383 3.8E-18 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM393_RS01220 e5d216983ee6e7dba810f785e9767e36 420 SUPERFAMILY SSF56349 98 392 5.59E-55 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AM393_RS01220 e5d216983ee6e7dba810f785e9767e36 420 Gene3D G3DSA:1.10.150.130 83 200 3.1E-20 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal AM393_RS21125 974848eefed72dda79f2e66ddb3ada0b 337 Pfam PF13185 GAF domain 17 154 1.9E-10 T 28-03-2018 IPR003018 GAF domain GO:0005515 AM393_RS21125 974848eefed72dda79f2e66ddb3ada0b 337 Gene3D G3DSA:3.30.70.270 174 335 3.0E-48 T 28-03-2018 AM393_RS21125 974848eefed72dda79f2e66ddb3ada0b 337 Pfam PF00990 Diguanylate cyclase, GGDEF domain 175 330 1.8E-40 T 28-03-2018 IPR000160 GGDEF domain AM393_RS21125 974848eefed72dda79f2e66ddb3ada0b 337 SMART SM00065 18 164 3.4E-8 T 28-03-2018 IPR003018 GAF domain GO:0005515 AM393_RS21125 974848eefed72dda79f2e66ddb3ada0b 337 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 170 332 3.3E-39 T 28-03-2018 IPR000160 GGDEF domain AM393_RS21125 974848eefed72dda79f2e66ddb3ada0b 337 SUPERFAMILY SSF55073 179 330 3.53E-39 T 28-03-2018 IPR029787 Nucleotide cyclase AM393_RS21125 974848eefed72dda79f2e66ddb3ada0b 337 SUPERFAMILY SSF55781 18 166 4.36E-17 T 28-03-2018 IPR029016 GAF domain-like AM393_RS21125 974848eefed72dda79f2e66ddb3ada0b 337 SMART SM00267 163 335 4.9E-44 T 28-03-2018 IPR000160 GGDEF domain AM393_RS21125 974848eefed72dda79f2e66ddb3ada0b 337 Gene3D G3DSA:3.30.450.40 5 173 1.9E-20 T 28-03-2018 IPR029016 GAF domain-like AM393_RS11330 11006b553a427956f3bd73f5d076feb5 416 Pfam PF01943 Polysaccharide biosynthesis protein 4 283 4.0E-11 T 28-03-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 AM393_RS11330 11006b553a427956f3bd73f5d076feb5 416 Hamap MF_02024 Lipid III flippase [wzxE]. 1 416 40.75 T 28-03-2018 IPR032896 Lipid III flippase WzxE GO:0005886|GO:0009246 AM393_RS06250 e1b2df78026386d87b74f386df73e91c 417 SUPERFAMILY SSF103473 9 406 1.09E-32 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS06250 e1b2df78026386d87b74f386df73e91c 417 Pfam PF03825 Nucleoside H+ symporter 1 406 3.1E-179 T 28-03-2018 AM393_RS06250 e1b2df78026386d87b74f386df73e91c 417 Gene3D G3DSA:1.20.1250.20 5 194 1.6E-5 T 28-03-2018 AM393_RS06250 e1b2df78026386d87b74f386df73e91c 417 Gene3D G3DSA:1.20.1250.20 195 416 2.3E-21 T 28-03-2018 AM393_RS06250 e1b2df78026386d87b74f386df73e91c 417 Hamap MF_02049 Nucleoside permease NupG [nupG]. 1 417 47.633 T 28-03-2018 IPR033667 Nucleoside permease NupG GO:0005887|GO:1901642 AM393_RS06250 e1b2df78026386d87b74f386df73e91c 417 TIGRFAM TIGR00889 2A0110: nucleoside transporter 1 414 4.6E-211 T 28-03-2018 IPR004740 Nucleoside:H+ symporter GO:0005337|GO:0015858|GO:0016021 AM393_RS12780 df15441c7a421c62426ad3f744458a03 508 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 232 499 7.2E-90 T 28-03-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 AM393_RS12780 df15441c7a421c62426ad3f744458a03 508 SUPERFAMILY SSF64153 17 255 5.62E-63 T 28-03-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 AM393_RS12780 df15441c7a421c62426ad3f744458a03 508 Gene3D G3DSA:3.40.1190.20 228 500 7.0E-51 T 28-03-2018 IPR029056 Ribokinase-like AM393_RS12780 df15441c7a421c62426ad3f744458a03 508 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 438 448 - T 28-03-2018 IPR017953 Carbohydrate kinase, predicted, conserved site AM393_RS12780 df15441c7a421c62426ad3f744458a03 508 SUPERFAMILY SSF53613 233 498 1.09E-75 T 28-03-2018 IPR029056 Ribokinase-like AM393_RS12780 df15441c7a421c62426ad3f744458a03 508 PIRSF PIRSF017184 15 504 2.7E-157 T 28-03-2018 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 AM393_RS12780 df15441c7a421c62426ad3f744458a03 508 Pfam PF01256 Carbohydrate kinase 258 495 2.2E-75 T 28-03-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 AM393_RS12780 df15441c7a421c62426ad3f744458a03 508 Gene3D G3DSA:3.40.50.10260 2 227 1.9E-64 T 28-03-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 AM393_RS12780 df15441c7a421c62426ad3f744458a03 508 Pfam PF03853 YjeF-related protein N-terminus 40 199 6.5E-44 T 28-03-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 AM393_RS12780 df15441c7a421c62426ad3f744458a03 508 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 24 220 8.9E-58 T 28-03-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 AM393_RS12780 df15441c7a421c62426ad3f744458a03 508 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 19 220 23.351 T 28-03-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 AM393_RS12780 df15441c7a421c62426ad3f744458a03 508 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 234 499 23.458 T 28-03-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 AM393_RS26885 7f83dc255251734f45e0ec5b759c9a7f 109 SUPERFAMILY SSF103063 53 107 5.49E-5 T 28-03-2018 IPR015051 Protein YoaG AM393_RS26885 7f83dc255251734f45e0ec5b759c9a7f 109 Pfam PF08956 Domain of unknown function (DUF1869) 54 107 4.2E-5 T 28-03-2018 IPR015051 Protein YoaG AM393_RS07685 1c558b5847a6090075f8082c9b770fbd 95 Gene3D G3DSA:3.30.160.100 1 95 2.1E-32 T 28-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 AM393_RS07685 1c558b5847a6090075f8082c9b770fbd 95 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 95 5.5E-35 T 28-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 AM393_RS07685 1c558b5847a6090075f8082c9b770fbd 95 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 93 3.6E-26 T 28-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 AM393_RS07685 1c558b5847a6090075f8082c9b770fbd 95 SUPERFAMILY SSF69754 1 95 1.26E-32 T 28-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 AM393_RS12410 f9893708fdcf63dde97bc52737f8132a 252 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS12410 f9893708fdcf63dde97bc52737f8132a 252 SUPERFAMILY SSF52540 3 248 4.12E-61 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS12410 f9893708fdcf63dde97bc52737f8132a 252 TIGRFAM TIGR02323 CP_lyasePhnK: phosphonate C-P lyase system protein PhnK 3 250 1.7E-121 T 28-03-2018 IPR012700 Phosphonate C-P lyase system, PhnK AM393_RS12410 f9893708fdcf63dde97bc52737f8132a 252 SMART SM00382 30 223 6.1E-15 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS12410 f9893708fdcf63dde97bc52737f8132a 252 Gene3D G3DSA:3.40.50.300 2 252 3.0E-63 T 28-03-2018 AM393_RS12410 f9893708fdcf63dde97bc52737f8132a 252 Pfam PF00005 ABC transporter 22 173 1.2E-31 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS12410 f9893708fdcf63dde97bc52737f8132a 252 PIRSF PIRSF037116 1 252 1.3E-139 T 28-03-2018 IPR012700 Phosphonate C-P lyase system, PhnK AM393_RS06180 de6d895793cf58b0f2c068aacc4b73e8 138 SUPERFAMILY SSF53098 3 136 1.02E-42 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM393_RS06180 de6d895793cf58b0f2c068aacc4b73e8 138 Pfam PF03652 Holliday junction resolvase 4 135 1.4E-42 T 28-03-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 AM393_RS06180 de6d895793cf58b0f2c068aacc4b73e8 138 Gene3D G3DSA:3.30.420.140 1 138 1.0E-42 T 28-03-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 AM393_RS06180 de6d895793cf58b0f2c068aacc4b73e8 138 SMART SM00732 3 103 2.7E-41 T 28-03-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 AM393_RS06180 de6d895793cf58b0f2c068aacc4b73e8 138 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 3 138 25.896 T 28-03-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 AM393_RS06180 de6d895793cf58b0f2c068aacc4b73e8 138 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 6 135 2.1E-56 T 28-03-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 AM393_RS12570 1e31bfc35ff0dcca1e57235601d02acc 107 SUPERFAMILY SSF54913 3 106 6.3E-34 T 28-03-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta AM393_RS12570 1e31bfc35ff0dcca1e57235601d02acc 107 Gene3D G3DSA:3.30.70.120 1 107 8.5E-36 T 28-03-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal AM393_RS12570 1e31bfc35ff0dcca1e57235601d02acc 107 Hamap MF_01160 Divalent-cation tolerance protein CutA [cutA]. 1 107 37.659 T 28-03-2018 IPR023700 Divalent cation tolerance protein CutA, Enterobacteria GO:0005507|GO:0005737 AM393_RS12570 1e31bfc35ff0dcca1e57235601d02acc 107 Pfam PF03091 CutA1 divalent ion tolerance protein 7 104 2.5E-32 T 28-03-2018 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 AM393_RS19585 5c5c524ecaa4c70b65c6a280dec9fc18 120 Pfam PF04965 Gene 25-like lysozyme 18 99 1.4E-15 T 28-03-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD AM393_RS19585 5c5c524ecaa4c70b65c6a280dec9fc18 120 SUPERFAMILY SSF160719 12 116 2.35E-27 T 28-03-2018 AM393_RS19585 5c5c524ecaa4c70b65c6a280dec9fc18 120 Gene3D G3DSA:3.10.450.40 2 119 4.3E-25 T 28-03-2018 AM393_RS18670 7133f23e00051c1aa348e2da76c03379 238 SUPERFAMILY SSF54292 1 106 3.68E-30 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AM393_RS18670 7133f23e00051c1aa348e2da76c03379 238 SUPERFAMILY SSF46548 107 236 1.2E-39 T 28-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AM393_RS18670 7133f23e00051c1aa348e2da76c03379 238 Gene3D G3DSA:3.10.20.30 1 106 1.9E-32 T 28-03-2018 IPR012675 Beta-grasp domain AM393_RS18670 7133f23e00051c1aa348e2da76c03379 238 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 149 160 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM393_RS18670 7133f23e00051c1aa348e2da76c03379 238 Gene3D G3DSA:1.10.1060.10 107 238 2.0E-29 T 28-03-2018 AM393_RS18670 7133f23e00051c1aa348e2da76c03379 238 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 7 230 6.7E-93 T 28-03-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM393_RS18670 7133f23e00051c1aa348e2da76c03379 238 Pfam PF13534 4Fe-4S dicluster domain 148 221 4.3E-10 T 28-03-2018 AM393_RS18670 7133f23e00051c1aa348e2da76c03379 238 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 5 111 2.3E-31 T 28-03-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM393_RS13170 27cd3078bc2966fbd5c2e8fc9fe8797c 712 Gene3D G3DSA:3.20.70.20 121 687 8.9E-211 T 28-03-2018 AM393_RS13170 27cd3078bc2966fbd5c2e8fc9fe8797c 712 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 116 705 1.3E-182 T 28-03-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2 AM393_RS13170 27cd3078bc2966fbd5c2e8fc9fe8797c 712 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 115 705 1.1E-209 T 28-03-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2 AM393_RS13170 27cd3078bc2966fbd5c2e8fc9fe8797c 712 Pfam PF03477 ATP cone domain 4 89 4.0E-21 T 28-03-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 AM393_RS13170 27cd3078bc2966fbd5c2e8fc9fe8797c 712 SUPERFAMILY SSF51998 121 687 9.77E-200 T 28-03-2018 AM393_RS13170 27cd3078bc2966fbd5c2e8fc9fe8797c 712 ProSitePatterns PS00850 Glycine radical domain signature. 676 684 - T 28-03-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site AM393_RS09495 b13318b6bbdf7131759e9816df9c2e44 613 PRINTS PR00315 GTP-binding elongation factor signature 54 64 1.4E-7 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM393_RS09495 b13318b6bbdf7131759e9816df9c2e44 613 PRINTS PR00315 GTP-binding elongation factor signature 107 116 1.4E-7 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM393_RS09495 b13318b6bbdf7131759e9816df9c2e44 613 PRINTS PR00315 GTP-binding elongation factor signature 70 81 1.4E-7 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM393_RS09495 b13318b6bbdf7131759e9816df9c2e44 613 PRINTS PR00315 GTP-binding elongation factor signature 2 15 1.4E-7 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM393_RS09495 b13318b6bbdf7131759e9816df9c2e44 613 Gene3D G3DSA:2.40.30.10 281 335 7.6E-8 T 28-03-2018 AM393_RS09495 b13318b6bbdf7131759e9816df9c2e44 613 SUPERFAMILY SSF52540 2 169 7.77E-43 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS09495 b13318b6bbdf7131759e9816df9c2e44 613 Pfam PF09106 Elongation factor SelB, winged helix 425 481 7.2E-15 T 28-03-2018 IPR015190 Translation elongation factor SelB, winged helix, type 2 GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 AM393_RS09495 b13318b6bbdf7131759e9816df9c2e44 613 Gene3D G3DSA:3.40.50.300 1 49 2.0E-9 T 28-03-2018 AM393_RS09495 b13318b6bbdf7131759e9816df9c2e44 613 Pfam PF09107 Elongation factor SelB, winged helix 563 606 4.4E-18 T 28-03-2018 IPR015191 Translation elongation factor SelB, winged helix, type 3 GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 AM393_RS09495 b13318b6bbdf7131759e9816df9c2e44 613 SUPERFAMILY SSF46785 418 485 5.17E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS09495 b13318b6bbdf7131759e9816df9c2e44 613 SUPERFAMILY SSF46785 489 547 5.78E-6 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS09495 b13318b6bbdf7131759e9816df9c2e44 613 SUPERFAMILY SSF50447 175 293 1.41E-23 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain AM393_RS09495 b13318b6bbdf7131759e9816df9c2e44 613 Pfam PF00009 Elongation factor Tu GTP binding domain 2 164 1.2E-32 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM393_RS09495 b13318b6bbdf7131759e9816df9c2e44 613 Gene3D G3DSA:1.10.10.10 418 481 7.8E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS09495 b13318b6bbdf7131759e9816df9c2e44 613 Gene3D G3DSA:2.40.30.10 172 280 1.1E-20 T 28-03-2018 AM393_RS09495 b13318b6bbdf7131759e9816df9c2e44 613 Pfam PF03144 Elongation factor Tu domain 2 189 256 1.9E-8 T 28-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AM393_RS09495 b13318b6bbdf7131759e9816df9c2e44 613 Gene3D G3DSA:1.10.10.10 549 607 1.8E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS09495 b13318b6bbdf7131759e9816df9c2e44 613 Gene3D G3DSA:3.40.50.300 50 171 1.5E-22 T 28-03-2018 AM393_RS09495 b13318b6bbdf7131759e9816df9c2e44 613 TIGRFAM TIGR00475 selB: selenocysteine-specific translation elongation factor 1 608 9.5E-234 T 28-03-2018 IPR004535 Translation elongation factor, selenocysteine-specific GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 AM393_RS09495 b13318b6bbdf7131759e9816df9c2e44 613 SUPERFAMILY SSF46785 552 608 1.36E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS09495 b13318b6bbdf7131759e9816df9c2e44 613 SUPERFAMILY SSF50465 275 351 1.73E-6 T 28-03-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal AM393_RS09495 b13318b6bbdf7131759e9816df9c2e44 613 Gene3D G3DSA:1.10.10.10 490 546 1.9E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS09495 b13318b6bbdf7131759e9816df9c2e44 613 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 26 41 - T 28-03-2018 IPR031157 Tr-type G domain, conserved site AM393_RS20720 ba720062b8f201e29a3ceeb39917d867 317 Pfam PF00849 RNA pseudouridylate synthase 101 249 4.0E-30 T 28-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM393_RS20720 ba720062b8f201e29a3ceeb39917d867 317 Gene3D G3DSA:3.10.290.10 7 79 5.5E-15 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AM393_RS20720 ba720062b8f201e29a3ceeb39917d867 317 SUPERFAMILY SSF55174 19 70 2.09E-9 T 28-03-2018 AM393_RS20720 ba720062b8f201e29a3ceeb39917d867 317 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 16 314 2.9E-100 T 28-03-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM393_RS20720 ba720062b8f201e29a3ceeb39917d867 317 Pfam PF01479 S4 domain 20 66 6.6E-11 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AM393_RS20720 ba720062b8f201e29a3ceeb39917d867 317 SUPERFAMILY SSF55120 95 314 2.24E-66 T 28-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM393_RS20720 ba720062b8f201e29a3ceeb39917d867 317 SMART SM00363 20 79 3.8E-10 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AM393_RS20720 ba720062b8f201e29a3ceeb39917d867 317 Gene3D G3DSA:3.30.2350.10 92 317 5.3E-70 T 28-03-2018 AM393_RS20720 ba720062b8f201e29a3ceeb39917d867 317 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 140 154 - T 28-03-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM393_RS09340 9a5787fe9d1ce80982011aba5a3833a8 338 SUPERFAMILY SSF47413 6 65 9.09E-12 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM393_RS09340 9a5787fe9d1ce80982011aba5a3833a8 338 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 67 316 2.7E-24 T 28-03-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain AM393_RS09340 9a5787fe9d1ce80982011aba5a3833a8 338 Pfam PF00356 Bacterial regulatory proteins, lacI family 8 54 3.1E-9 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM393_RS09340 9a5787fe9d1ce80982011aba5a3833a8 338 SMART SM00354 6 77 4.8E-22 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM393_RS09340 9a5787fe9d1ce80982011aba5a3833a8 338 Gene3D G3DSA:3.40.50.2300 62 168 1.9E-31 T 28-03-2018 AM393_RS09340 9a5787fe9d1ce80982011aba5a3833a8 338 Gene3D G3DSA:3.40.50.2300 169 338 7.5E-34 T 28-03-2018 AM393_RS09340 9a5787fe9d1ce80982011aba5a3833a8 338 SUPERFAMILY SSF53822 64 324 4.53E-57 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AM393_RS09340 9a5787fe9d1ce80982011aba5a3833a8 338 Gene3D G3DSA:1.10.260.40 5 61 4.0E-14 T 28-03-2018 AM393_RS17455 3c1587ea323a9b67073035c2a72aedb1 307 Pfam PF00294 pfkB family carbohydrate kinase 4 298 9.6E-75 T 28-03-2018 IPR011611 Carbohydrate kinase PfkB AM393_RS17455 3c1587ea323a9b67073035c2a72aedb1 307 SUPERFAMILY SSF53613 2 305 4.68E-81 T 28-03-2018 IPR029056 Ribokinase-like AM393_RS17455 3c1587ea323a9b67073035c2a72aedb1 307 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 245 258 - T 28-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AM393_RS17455 3c1587ea323a9b67073035c2a72aedb1 307 PRINTS PR00990 Ribokinase signature 23 42 4.1E-5 T 28-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AM393_RS17455 3c1587ea323a9b67073035c2a72aedb1 307 PRINTS PR00990 Ribokinase signature 216 227 4.1E-5 T 28-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AM393_RS17455 3c1587ea323a9b67073035c2a72aedb1 307 PRINTS PR00990 Ribokinase signature 176 191 4.1E-5 T 28-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AM393_RS17455 3c1587ea323a9b67073035c2a72aedb1 307 Gene3D G3DSA:3.40.1190.20 4 307 1.7E-70 T 28-03-2018 IPR029056 Ribokinase-like AM393_RS17455 3c1587ea323a9b67073035c2a72aedb1 307 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 28 52 - T 28-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AM393_RS08215 087ad6fe2efda767439b664823d227c2 118 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 25.691 T 28-03-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM393_RS08215 087ad6fe2efda767439b664823d227c2 118 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 2.1E-52 T 28-03-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM393_RS08215 087ad6fe2efda767439b664823d227c2 118 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 28-03-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM393_RS08215 087ad6fe2efda767439b664823d227c2 118 Pfam PF00416 Ribosomal protein S13/S18 3 108 8.7E-33 T 28-03-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM393_RS08215 087ad6fe2efda767439b664823d227c2 118 SUPERFAMILY SSF46946 2 114 9.42E-46 T 28-03-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 AM393_RS08215 087ad6fe2efda767439b664823d227c2 118 Gene3D G3DSA:4.10.910.10 85 118 9.7E-26 T 28-03-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM393_RS08215 087ad6fe2efda767439b664823d227c2 118 Gene3D G3DSA:4.10.910.10 67 84 1.7E-17 T 28-03-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM393_RS08215 087ad6fe2efda767439b664823d227c2 118 Gene3D G3DSA:1.10.8.50 1 66 8.5E-21 T 28-03-2018 AM393_RS08215 087ad6fe2efda767439b664823d227c2 118 PIRSF PIRSF002134 1 118 5.7E-41 T 28-03-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM393_RS02785 c0e0a1efb9004060428b203bf409446b 175 Pfam PF13302 Acetyltransferase (GNAT) domain 8 139 3.2E-24 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AM393_RS02785 c0e0a1efb9004060428b203bf409446b 175 Gene3D G3DSA:3.40.630.30 1 174 1.9E-32 T 28-03-2018 AM393_RS02785 c0e0a1efb9004060428b203bf409446b 175 SUPERFAMILY SSF55729 1 163 2.2E-37 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM393_RS01245 79913561607635faf2461c050697dc80 319 Pfam PF12833 Helix-turn-helix domain 239 317 1.5E-18 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM393_RS01245 79913561607635faf2461c050697dc80 319 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 270 312 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM393_RS01245 79913561607635faf2461c050697dc80 319 Gene3D G3DSA:1.10.10.60 273 318 4.9E-14 T 28-03-2018 AM393_RS01245 79913561607635faf2461c050697dc80 319 SUPERFAMILY SSF46689 270 317 1.7E-12 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS01245 79913561607635faf2461c050697dc80 319 Gene3D G3DSA:1.10.10.60 219 272 0.006 T 28-03-2018 AM393_RS01245 79913561607635faf2461c050697dc80 319 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 285 300 1.0E-6 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM393_RS01245 79913561607635faf2461c050697dc80 319 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 300 316 1.0E-6 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM393_RS01245 79913561607635faf2461c050697dc80 319 SMART SM00342 233 316 2.3E-24 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM393_RS12055 31f2c0afd7e75c6f0858fa002e7b5ea9 807 PIRSF PIRSF500064 2 807 0.0 T 28-03-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109 AM393_RS12055 31f2c0afd7e75c6f0858fa002e7b5ea9 807 SUPERFAMILY SSF69593 246 482 2.88E-23 T 28-03-2018 AM393_RS12055 31f2c0afd7e75c6f0858fa002e7b5ea9 807 Hamap MF_00393 Glycerol-3-phosphate acyltransferase [plsB]. 13 807 33.317 T 28-03-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109 AM393_RS12055 31f2c0afd7e75c6f0858fa002e7b5ea9 807 TIGRFAM TIGR03703 plsB: glycerol-3-phosphate O-acyltransferase 11 799 0.0 T 28-03-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109 AM393_RS12055 31f2c0afd7e75c6f0858fa002e7b5ea9 807 Pfam PF01553 Acyltransferase 282 424 3.9E-26 T 28-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AM393_RS12055 31f2c0afd7e75c6f0858fa002e7b5ea9 807 Gene3D G3DSA:3.40.1130.10 236 496 9.3E-35 T 28-03-2018 AM393_RS12055 31f2c0afd7e75c6f0858fa002e7b5ea9 807 SMART SM00563 300 427 7.8E-28 T 28-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AM393_RS12055 31f2c0afd7e75c6f0858fa002e7b5ea9 807 PIRSF PIRSF000437 19 807 0.0 T 28-03-2018 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166 AM393_RS02120 54af6aad91eaaf3ddc5f460acc578f11 454 Gene3D G3DSA:2.40.160.20 281 449 0.057 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AM393_RS02120 54af6aad91eaaf3ddc5f460acc578f11 454 Pfam PF04966 Carbohydrate-selective porin, OprB family 83 454 1.1E-58 T 28-03-2018 IPR007049 Carbohydrate-selective porin OprB GO:0005215|GO:0006810|GO:0016021 AM393_RS24890 4c5385090686b8d9bd5b0318359a17a1 460 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 200 438 2.0E-18 T 28-03-2018 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 AM393_RS24890 4c5385090686b8d9bd5b0318359a17a1 460 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 85 105 3.4E-45 T 28-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 AM393_RS24890 4c5385090686b8d9bd5b0318359a17a1 460 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 106 126 3.4E-45 T 28-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 AM393_RS24890 4c5385090686b8d9bd5b0318359a17a1 460 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 34 59 3.4E-45 T 28-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 AM393_RS24890 4c5385090686b8d9bd5b0318359a17a1 460 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 193 215 3.4E-45 T 28-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 AM393_RS24890 4c5385090686b8d9bd5b0318359a17a1 460 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 64 79 3.4E-45 T 28-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 AM393_RS24890 4c5385090686b8d9bd5b0318359a17a1 460 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 152 178 3.4E-45 T 28-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 AM393_RS24890 4c5385090686b8d9bd5b0318359a17a1 460 Gene3D G3DSA:3.90.380.10 158 460 3.4E-69 T 28-03-2018 AM393_RS24890 4c5385090686b8d9bd5b0318359a17a1 460 Pfam PF00355 Rieske [2Fe-2S] domain 49 131 1.6E-20 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AM393_RS24890 4c5385090686b8d9bd5b0318359a17a1 460 Gene3D G3DSA:2.102.10.10 47 157 5.6E-23 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AM393_RS24890 4c5385090686b8d9bd5b0318359a17a1 460 ProSitePatterns PS00570 Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 92 115 - T 28-03-2018 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site GO:0005506|GO:0016705|GO:0051537|GO:0055114 AM393_RS24890 4c5385090686b8d9bd5b0318359a17a1 460 SUPERFAMILY SSF55961 168 455 8.63E-66 T 28-03-2018 AM393_RS24890 4c5385090686b8d9bd5b0318359a17a1 460 SUPERFAMILY SSF50022 14 168 2.62E-45 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AM393_RS04330 9d5d1e913bfbbb6067fb75a3020377de 558 SUPERFAMILY SSF110921 443 549 1.7E-25 T 28-03-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AM393_RS04330 9d5d1e913bfbbb6067fb75a3020377de 558 Gene3D G3DSA:3.20.20.70 8 374 7.1E-110 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM393_RS04330 9d5d1e913bfbbb6067fb75a3020377de 558 Hamap MF_00572 2-isopropylmalate synthase [leuA]. 6 553 51.397 T 28-03-2018 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AM393_RS04330 9d5d1e913bfbbb6067fb75a3020377de 558 TIGRFAM TIGR00970 leuA_yeast: 2-isopropylmalate synthase 5 551 3.6E-234 T 28-03-2018 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AM393_RS04330 9d5d1e913bfbbb6067fb75a3020377de 558 SUPERFAMILY SSF89000 387 434 7.85E-13 T 28-03-2018 AM393_RS04330 9d5d1e913bfbbb6067fb75a3020377de 558 SUPERFAMILY SSF51569 20 328 8.61E-98 T 28-03-2018 AM393_RS04330 9d5d1e913bfbbb6067fb75a3020377de 558 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 38 54 - T 28-03-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AM393_RS04330 9d5d1e913bfbbb6067fb75a3020377de 558 Pfam PF08502 LeuA allosteric (dimerisation) domain 420 549 2.2E-21 T 28-03-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AM393_RS04330 9d5d1e913bfbbb6067fb75a3020377de 558 Pfam PF00682 HMGL-like 31 311 4.8E-73 T 28-03-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 AM393_RS04330 9d5d1e913bfbbb6067fb75a3020377de 558 SMART SM00917 420 552 3.6E-22 T 28-03-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AM393_RS04330 9d5d1e913bfbbb6067fb75a3020377de 558 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 241 254 - T 28-03-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AM393_RS22485 04e14e85c1a5c69dc582954d29aa62bd 337 SMART SM00382 30 220 2.1E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS22485 04e14e85c1a5c69dc582954d29aa62bd 337 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS22485 04e14e85c1a5c69dc582954d29aa62bd 337 SMART SM00930 262 337 8.5E-26 T 28-03-2018 IPR018449 NIL domain AM393_RS22485 04e14e85c1a5c69dc582954d29aa62bd 337 Gene3D G3DSA:3.30.70.260 259 337 9.5E-23 T 28-03-2018 AM393_RS22485 04e14e85c1a5c69dc582954d29aa62bd 337 SUPERFAMILY SSF55021 249 336 2.63E-20 T 28-03-2018 AM393_RS22485 04e14e85c1a5c69dc582954d29aa62bd 337 Pfam PF09383 NIL domain 266 334 1.8E-18 T 28-03-2018 IPR018449 NIL domain AM393_RS22485 04e14e85c1a5c69dc582954d29aa62bd 337 Pfam PF00005 ABC transporter 21 169 3.3E-35 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS22485 04e14e85c1a5c69dc582954d29aa62bd 337 Gene3D G3DSA:3.40.50.300 1 258 6.3E-75 T 28-03-2018 AM393_RS22485 04e14e85c1a5c69dc582954d29aa62bd 337 SUPERFAMILY SSF52540 1 240 2.26E-81 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS12525 e0cff0a60f97f4b89d72c63bbdc3cb1e 442 Gene3D G3DSA:3.90.550.10 55 335 1.3E-56 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM393_RS12525 e0cff0a60f97f4b89d72c63bbdc3cb1e 442 TIGRFAM TIGR03937 PgaC_IcaA: poly-beta-1,6 N-acetyl-D-glucosamine synthase 31 438 2.2E-192 T 28-03-2018 IPR023853 Poly-beta-1,6 N-acetyl-D-glucosamine synthase PgaC/IcaA GO:0008375|GO:0042710 AM393_RS12525 e0cff0a60f97f4b89d72c63bbdc3cb1e 442 SUPERFAMILY SSF53448 62 341 3.32E-64 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM393_RS12525 e0cff0a60f97f4b89d72c63bbdc3cb1e 442 Pfam PF13641 Glycosyltransferase like family 2 77 297 6.4E-38 T 28-03-2018 AM393_RS26635 ab5a4fcdfea7e0789e457add259cea61 891 SUPERFAMILY SSF53720 6 453 8.77E-85 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AM393_RS26635 ab5a4fcdfea7e0789e457add259cea61 891 PIRSF PIRSF000111 1 866 0.0 T 28-03-2018 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase GO:0004022|GO:0006066|GO:0008774|GO:0015976|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396 AM393_RS26635 ab5a4fcdfea7e0789e457add259cea61 891 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 632 660 - T 28-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 AM393_RS26635 ab5a4fcdfea7e0789e457add259cea61 891 Gene3D G3DSA:1.20.1090.10 644 868 1.1E-59 T 28-03-2018 AM393_RS26635 ab5a4fcdfea7e0789e457add259cea61 891 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 720 740 - T 28-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 AM393_RS26635 ab5a4fcdfea7e0789e457add259cea61 891 SUPERFAMILY SSF56796 449 867 6.28E-118 T 28-03-2018 AM393_RS26635 ab5a4fcdfea7e0789e457add259cea61 891 Pfam PF00465 Iron-containing alcohol dehydrogenase 457 850 1.1E-113 T 28-03-2018 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 AM393_RS26635 ab5a4fcdfea7e0789e457add259cea61 891 Pfam PF00171 Aldehyde dehydrogenase family 6 399 1.4E-27 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AM393_RS26635 ab5a4fcdfea7e0789e457add259cea61 891 Gene3D G3DSA:3.40.309.10 232 404 7.9E-28 T 28-03-2018 AM393_RS26635 ab5a4fcdfea7e0789e457add259cea61 891 Gene3D G3DSA:3.40.605.10 1 231 3.6E-33 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AM393_RS26635 ab5a4fcdfea7e0789e457add259cea61 891 Gene3D G3DSA:3.40.50.1970 430 643 2.9E-50 T 28-03-2018 AM393_RS01545 14561ce6a9d089dd48ffd697846d5fec 439 Gene3D G3DSA:1.20.1250.20 244 439 2.3E-21 T 28-03-2018 AM393_RS01545 14561ce6a9d089dd48ffd697846d5fec 439 Pfam PF00083 Sugar (and other) transporter 28 417 3.0E-20 T 28-03-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 AM393_RS01545 14561ce6a9d089dd48ffd697846d5fec 439 Gene3D G3DSA:1.20.1250.20 15 233 8.0E-21 T 28-03-2018 AM393_RS01545 14561ce6a9d089dd48ffd697846d5fec 439 ProSitePatterns PS00217 Sugar transport proteins signature 2. 133 158 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM393_RS01545 14561ce6a9d089dd48ffd697846d5fec 439 SUPERFAMILY SSF103473 18 437 2.09E-60 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS01545 14561ce6a9d089dd48ffd697846d5fec 439 TIGRFAM TIGR00883 2A0106: MFS transporter, metabolite:H+ symporter (MHS) family protein 29 426 1.1E-148 T 28-03-2018 IPR004736 Citrate-proton symport GO:0005215|GO:0006810|GO:0016021 AM393_RS02910 4450a2bd5811920c765e84c85113f3ec 310 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 13 295 2.0E-139 T 28-03-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 AM393_RS02910 4450a2bd5811920c765e84c85113f3ec 310 Gene3D G3DSA:1.10.8.10 14 101 2.0E-12 T 28-03-2018 AM393_RS02910 4450a2bd5811920c765e84c85113f3ec 310 Hamap MF_02125 50S ribosomal protein L3 glutamine methyltransferase [prmB]. 6 300 54.419 T 28-03-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 AM393_RS02910 4450a2bd5811920c765e84c85113f3ec 310 Gene3D G3DSA:3.40.50.150 102 274 1.0E-35 T 28-03-2018 AM393_RS02910 4450a2bd5811920c765e84c85113f3ec 310 PIRSF PIRSF037167 2 307 3.7E-151 T 28-03-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 AM393_RS02910 4450a2bd5811920c765e84c85113f3ec 310 SUPERFAMILY SSF53335 15 293 2.76E-52 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM393_RS02910 4450a2bd5811920c765e84c85113f3ec 310 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 204 210 - T 28-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AM393_RS02910 4450a2bd5811920c765e84c85113f3ec 310 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 15 302 6.8E-107 T 28-03-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 AM393_RS02910 4450a2bd5811920c765e84c85113f3ec 310 Pfam PF05175 Methyltransferase small domain 132 215 2.5E-16 T 28-03-2018 IPR007848 Methyltransferase small domain GO:0008168 AM393_RS00845 e105eb11f0f45eb8d3836f6c7ba6ae9e 403 PRINTS PR00166 Aromatic amino acid permease signature 316 334 1.2E-89 T 28-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AM393_RS00845 e105eb11f0f45eb8d3836f6c7ba6ae9e 403 PRINTS PR00166 Aromatic amino acid permease signature 148 168 1.2E-89 T 28-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AM393_RS00845 e105eb11f0f45eb8d3836f6c7ba6ae9e 403 PRINTS PR00166 Aromatic amino acid permease signature 37 56 1.2E-89 T 28-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AM393_RS00845 e105eb11f0f45eb8d3836f6c7ba6ae9e 403 PRINTS PR00166 Aromatic amino acid permease signature 182 204 1.2E-89 T 28-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AM393_RS00845 e105eb11f0f45eb8d3836f6c7ba6ae9e 403 PRINTS PR00166 Aromatic amino acid permease signature 221 240 1.2E-89 T 28-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AM393_RS00845 e105eb11f0f45eb8d3836f6c7ba6ae9e 403 PRINTS PR00166 Aromatic amino acid permease signature 337 356 1.2E-89 T 28-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AM393_RS00845 e105eb11f0f45eb8d3836f6c7ba6ae9e 403 PRINTS PR00166 Aromatic amino acid permease signature 10 33 1.2E-89 T 28-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AM393_RS00845 e105eb11f0f45eb8d3836f6c7ba6ae9e 403 PRINTS PR00166 Aromatic amino acid permease signature 282 301 1.2E-89 T 28-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AM393_RS00845 e105eb11f0f45eb8d3836f6c7ba6ae9e 403 PRINTS PR00166 Aromatic amino acid permease signature 82 102 1.2E-89 T 28-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AM393_RS00845 e105eb11f0f45eb8d3836f6c7ba6ae9e 403 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 7 384 7.4E-138 T 28-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AM393_RS00845 e105eb11f0f45eb8d3836f6c7ba6ae9e 403 Pfam PF03222 Tryptophan/tyrosine permease family 3 390 1.3E-134 T 28-03-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 AM393_RS00845 e105eb11f0f45eb8d3836f6c7ba6ae9e 403 ProSitePatterns PS00594 Aromatic amino acids permeases signature. 17 33 - T 28-03-2018 IPR013061 Tryptophan/tryrosine permease, conserved site AM393_RS26110 53ef09e6e29b82b722328e7714685519 350 Gene3D G3DSA:1.10.3470.10 22 349 1.2E-59 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AM393_RS26110 53ef09e6e29b82b722328e7714685519 350 SUPERFAMILY SSF81345 24 346 4.18E-70 T 28-03-2018 IPR029022 ABC transporter, BtuC-like AM393_RS26110 53ef09e6e29b82b722328e7714685519 350 Pfam PF01032 FecCD transport family 37 345 1.5E-79 T 28-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 AM393_RS16990 f2e3132c9ae9e5594ff445f08ea6e73a 229 SUPERFAMILY SSF47413 12 67 5.04E-8 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM393_RS16990 f2e3132c9ae9e5594ff445f08ea6e73a 229 SUPERFAMILY SSF51306 87 217 2.35E-17 T 28-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AM393_RS16990 f2e3132c9ae9e5594ff445f08ea6e73a 229 Gene3D G3DSA:2.10.109.10 83 221 1.2E-18 T 28-03-2018 AM393_RS16990 f2e3132c9ae9e5594ff445f08ea6e73a 229 Pfam PF00717 Peptidase S24-like 138 204 4.0E-10 T 28-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AM393_RS16990 f2e3132c9ae9e5594ff445f08ea6e73a 229 Pfam PF01381 Helix-turn-helix 13 59 3.4E-5 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM393_RS16990 f2e3132c9ae9e5594ff445f08ea6e73a 229 SMART SM00530 6 59 7.3E-8 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM393_RS16990 f2e3132c9ae9e5594ff445f08ea6e73a 229 Gene3D G3DSA:1.10.260.40 1 67 9.2E-12 T 28-03-2018 AM393_RS02600 0f186305ce01f20ce57748ef01e72f18 458 Gene3D G3DSA:3.40.50.980 4 144 2.3E-18 T 28-03-2018 AM393_RS02600 0f186305ce01f20ce57748ef01e72f18 458 SUPERFAMILY SSF56801 8 452 6.28E-94 T 28-03-2018 AM393_RS02600 0f186305ce01f20ce57748ef01e72f18 458 ProSitePatterns PS00455 Putative AMP-binding domain signature. 139 150 - T 28-03-2018 IPR020845 AMP-binding, conserved site AM393_RS02600 0f186305ce01f20ce57748ef01e72f18 458 Pfam PF00501 AMP-binding enzyme 10 355 8.8E-49 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AM393_RS02600 0f186305ce01f20ce57748ef01e72f18 458 Pfam PF13193 AMP-binding enzyme C-terminal domain 366 430 4.5E-7 T 28-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain AM393_RS02600 0f186305ce01f20ce57748ef01e72f18 458 Gene3D G3DSA:2.30.38.10 282 350 7.8E-9 T 28-03-2018 AM393_RS02600 0f186305ce01f20ce57748ef01e72f18 458 Gene3D G3DSA:3.30.300.30 351 458 9.4E-20 T 28-03-2018 AM393_RS02600 0f186305ce01f20ce57748ef01e72f18 458 Gene3D G3DSA:3.40.50.980 145 281 1.6E-25 T 28-03-2018 AM393_RS02600 0f186305ce01f20ce57748ef01e72f18 458 TIGRFAM TIGR01923 menE: O-succinylbenzoate-CoA ligase 29 445 9.4E-113 T 28-03-2018 IPR010192 2-succinylbenzoate--CoA ligase GO:0005524|GO:0008756|GO:0009234 KEGG: 00130+6.2.1.26|MetaCyc: PWY-5837 AM393_RS02690 4c88f8f7ef3f2398593782c6f9792a78 602 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 331 602 3.1E-102 T 28-03-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM393_RS02690 4c88f8f7ef3f2398593782c6f9792a78 602 Gene3D G3DSA:1.10.645.10 213 414 6.6E-47 T 28-03-2018 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM393_RS02690 4c88f8f7ef3f2398593782c6f9792a78 602 Gene3D G3DSA:1.10.645.10 415 598 2.7E-30 T 28-03-2018 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM393_RS02690 4c88f8f7ef3f2398593782c6f9792a78 602 ProSitePatterns PS00542 Respiratory chain NADH dehydrogenase 30 Kd subunit signature. 140 161 - T 28-03-2018 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM393_RS02690 4c88f8f7ef3f2398593782c6f9792a78 602 TIGRFAM TIGR01961 NuoC_fam: NADH (or F420H2) dehydrogenase, subunit C 51 178 3.3E-44 T 28-03-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM393_RS02690 4c88f8f7ef3f2398593782c6f9792a78 602 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 107 162 4.0E-25 T 28-03-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM393_RS02690 4c88f8f7ef3f2398593782c6f9792a78 602 SUPERFAMILY SSF143243 27 231 5.75E-59 T 28-03-2018 AM393_RS02690 4c88f8f7ef3f2398593782c6f9792a78 602 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 254 265 - T 28-03-2018 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM393_RS02690 4c88f8f7ef3f2398593782c6f9792a78 602 Hamap MF_01357 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic [ndhJ]. 27 191 24.802 T 28-03-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM393_RS02690 4c88f8f7ef3f2398593782c6f9792a78 602 SUPERFAMILY SSF56762 227 602 2.75E-119 T 28-03-2018 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM393_RS02690 4c88f8f7ef3f2398593782c6f9792a78 602 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 52 179 1.2E-40 T 28-03-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM393_RS02690 4c88f8f7ef3f2398593782c6f9792a78 602 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 217 602 5.7E-177 T 28-03-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM393_RS02690 4c88f8f7ef3f2398593782c6f9792a78 602 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 213 602 41.953 T 28-03-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM393_RS02690 4c88f8f7ef3f2398593782c6f9792a78 602 Hamap MF_01359 NADH-quinone oxidoreductase subunit C/D [nuoC]. 18 602 72.767 T 28-03-2018 IPR023062 NADH dehydrogenase, subunit CD GO:0030964|GO:0050136|GO:0055114 KEGG: 00190+1.6.5.11 AM393_RS13850 a622e9ff42b307aa582c8afe38c90a5a 181 Pfam PF07437 YfaZ precursor 1 181 1.4E-44 T 28-03-2018 IPR009998 YfaZ AM393_RS13850 a622e9ff42b307aa582c8afe38c90a5a 181 Gene3D G3DSA:2.40.160.10 9 181 1.8E-4 T 28-03-2018 AM393_RS13850 a622e9ff42b307aa582c8afe38c90a5a 181 SUPERFAMILY SSF56925 57 174 7.59E-7 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AM393_RS25515 06d1d015f4caf79c9a5b45ff3667b490 365 Gene3D G3DSA:3.20.20.70 5 365 8.5E-126 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM393_RS25515 06d1d015f4caf79c9a5b45ff3667b490 365 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 5 344 2.3E-89 T 28-03-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 AM393_RS25515 06d1d015f4caf79c9a5b45ff3667b490 365 SUPERFAMILY SSF51395 4 364 7.63E-123 T 28-03-2018 AM393_RS12705 ecd68d02ec06e329b06b4b48041dd4b2 244 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 9 111 5.4E-30 T 28-03-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM393_RS12705 ecd68d02ec06e329b06b4b48041dd4b2 244 Gene3D G3DSA:3.10.20.30 1 106 6.2E-28 T 28-03-2018 IPR012675 Beta-grasp domain AM393_RS12705 ecd68d02ec06e329b06b4b48041dd4b2 244 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 58 66 - T 28-03-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AM393_RS12705 ecd68d02ec06e329b06b4b48041dd4b2 244 Gene3D G3DSA:1.10.1060.10 107 242 1.1E-26 T 28-03-2018 AM393_RS12705 ecd68d02ec06e329b06b4b48041dd4b2 244 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 149 160 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM393_RS12705 ecd68d02ec06e329b06b4b48041dd4b2 244 Pfam PF13183 4Fe-4S dicluster domain 146 219 1.6E-11 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM393_RS12705 ecd68d02ec06e329b06b4b48041dd4b2 244 SUPERFAMILY SSF54292 4 106 5.27E-28 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AM393_RS12705 ecd68d02ec06e329b06b4b48041dd4b2 244 SUPERFAMILY SSF46548 107 229 1.43E-31 T 28-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AM393_RS12705 ecd68d02ec06e329b06b4b48041dd4b2 244 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 11 229 5.0E-97 T 28-03-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM393_RS07350 8449b7de4f6f8a859364b577c72881d8 460 PIRSF PIRSF006304 2 454 6.7E-169 T 28-03-2018 IPR013853 Galactitol permease IIC component GO:0015577|GO:0015796 AM393_RS07350 8449b7de4f6f8a859364b577c72881d8 460 Pfam PF03611 PTS system sugar-specific permease component 8 385 1.9E-79 T 28-03-2018 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 AM393_RS07350 8449b7de4f6f8a859364b577c72881d8 460 TIGRFAM TIGR00827 EIIC-GAT: PTS system, galactitol-specific IIC component 9 412 1.2E-202 T 28-03-2018 IPR013853 Galactitol permease IIC component GO:0015577|GO:0015796 AM393_RS06510 9a9863e9dabf5d8e17837aa4dac83b32 189 TIGRFAM TIGR03748 conj_PilL: integrating conjugative element protein PilL, PFGI-1 class 57 159 5.0E-39 T 28-03-2018 IPR022260 Integrating conjugative element protein PilL, PFGI-1 AM393_RS04505 61e67553c60858114d360f34461620fd 744 Pfam PF01300 Telomere recombination 205 368 2.0E-45 T 28-03-2018 IPR006070 YrdC-like domain GO:0003725 AM393_RS04505 61e67553c60858114d360f34461620fd 744 Pfam PF00708 Acylphosphatase 4 85 3.0E-11 T 28-03-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 AM393_RS04505 61e67553c60858114d360f34461620fd 744 SUPERFAMILY SSF55821 170 374 1.4E-43 T 28-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain AM393_RS04505 61e67553c60858114d360f34461620fd 744 Pfam PF07503 HypF finger 153 185 2.9E-15 T 28-03-2018 IPR011125 Zinc finger, HypF-type GO:0008270 AM393_RS04505 61e67553c60858114d360f34461620fd 744 Pfam PF07503 HypF finger 103 136 2.2E-16 T 28-03-2018 IPR011125 Zinc finger, HypF-type GO:0008270 AM393_RS04505 61e67553c60858114d360f34461620fd 744 ProSitePatterns PS00150 Acylphosphatase signature 1. 8 18 - T 28-03-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 AM393_RS04505 61e67553c60858114d360f34461620fd 744 PIRSF PIRSF006256 1 743 4.7E-259 T 28-03-2018 IPR004421 Carbamoyltransferase, HypF-type GO:0016743|GO:0046872|GO:0046944 AM393_RS04505 61e67553c60858114d360f34461620fd 744 SUPERFAMILY SSF54975 3 86 1.18E-18 T 28-03-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 AM393_RS04505 61e67553c60858114d360f34461620fd 744 Gene3D G3DSA:3.90.870.10 187 377 1.6E-45 T 28-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain AM393_RS04505 61e67553c60858114d360f34461620fd 744 Gene3D G3DSA:3.30.70.100 1 92 1.3E-17 T 28-03-2018 AM393_RS04505 61e67553c60858114d360f34461620fd 744 TIGRFAM TIGR00143 hypF: carbamoyltransferase HypF 6 733 8.9E-268 T 28-03-2018 IPR004421 Carbamoyltransferase, HypF-type GO:0016743|GO:0046872|GO:0046944 AM393_RS04505 61e67553c60858114d360f34461620fd 744 Gene3D G3DSA:3.30.420.40 562 711 4.4E-24 T 28-03-2018 AM393_RS02060 bd353c35b230a447cfd4dcc29ea6226c 305 Gene3D G3DSA:3.40.190.10 16 184 3.2E-27 T 28-03-2018 AM393_RS02060 bd353c35b230a447cfd4dcc29ea6226c 305 SUPERFAMILY SSF53850 25 304 1.19E-61 T 28-03-2018 AM393_RS02060 bd353c35b230a447cfd4dcc29ea6226c 305 Gene3D G3DSA:3.40.190.10 185 302 2.8E-19 T 28-03-2018 AM393_RS02060 bd353c35b230a447cfd4dcc29ea6226c 305 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 26 300 3.0E-61 T 28-03-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 AM393_RS14370 fdf7fbe4a95477a637862f6e8b62b0b5 476 Pfam PF01235 Sodium:alanine symporter family 52 453 2.7E-141 T 28-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AM393_RS14370 fdf7fbe4a95477a637862f6e8b62b0b5 476 PRINTS PR00175 Sodium/alanine symporter signature 206 225 3.5E-48 T 28-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AM393_RS14370 fdf7fbe4a95477a637862f6e8b62b0b5 476 PRINTS PR00175 Sodium/alanine symporter signature 410 430 3.5E-48 T 28-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AM393_RS14370 fdf7fbe4a95477a637862f6e8b62b0b5 476 PRINTS PR00175 Sodium/alanine symporter signature 303 321 3.5E-48 T 28-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AM393_RS14370 fdf7fbe4a95477a637862f6e8b62b0b5 476 PRINTS PR00175 Sodium/alanine symporter signature 178 196 3.5E-48 T 28-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AM393_RS14370 fdf7fbe4a95477a637862f6e8b62b0b5 476 PRINTS PR00175 Sodium/alanine symporter signature 87 109 3.5E-48 T 28-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AM393_RS14370 fdf7fbe4a95477a637862f6e8b62b0b5 476 PRINTS PR00175 Sodium/alanine symporter signature 349 371 3.5E-48 T 28-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AM393_RS14370 fdf7fbe4a95477a637862f6e8b62b0b5 476 TIGRFAM TIGR00835 agcS: amino acid carrier protein 13 441 5.0E-149 T 28-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AM393_RS14370 fdf7fbe4a95477a637862f6e8b62b0b5 476 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 87 102 - T 28-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AM393_RS16100 c4b463e9feab012b968f3d7bfa44c6db 86 Hamap MF_01198 Anti-adapter protein IraP [iraP]. 1 86 30.195 T 28-03-2018 IPR019732 Sigma-S stabilisation anti-adaptor protein GO:0005737 AM393_RS16100 c4b463e9feab012b968f3d7bfa44c6db 86 Pfam PF10796 Sigma-S stabilisation anti-adaptor protein 1 85 5.2E-32 T 28-03-2018 IPR019732 Sigma-S stabilisation anti-adaptor protein GO:0005737 AM393_RS13220 5e225c5ddae441222508ea5e88190a45 128 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 103 121 - T 28-03-2018 IPR019897 RidA, conserved site AM393_RS13220 5e225c5ddae441222508ea5e88190a45 128 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 3 126 7.9E-53 T 28-03-2018 IPR006056 RidA family AM393_RS13220 5e225c5ddae441222508ea5e88190a45 128 Pfam PF01042 Endoribonuclease L-PSP 7 126 5.3E-44 T 28-03-2018 IPR006175 YjgF/YER057c/UK114 family AM393_RS13220 5e225c5ddae441222508ea5e88190a45 128 Gene3D G3DSA:3.30.1330.40 1 128 1.4E-45 T 28-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AM393_RS13220 5e225c5ddae441222508ea5e88190a45 128 SUPERFAMILY SSF55298 4 127 6.28E-43 T 28-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AM393_RS22625 493a60772b6c7b886e9271858d54a565 499 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 299 310 - T 28-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 AM393_RS22625 493a60772b6c7b886e9271858d54a565 499 Gene3D G3DSA:3.40.605.10 9 287 3.7E-100 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AM393_RS22625 493a60772b6c7b886e9271858d54a565 499 SUPERFAMILY SSF53720 10 498 1.83E-161 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AM393_RS22625 493a60772b6c7b886e9271858d54a565 499 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 271 278 - T 28-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 AM393_RS22625 493a60772b6c7b886e9271858d54a565 499 Pfam PF00171 Aldehyde dehydrogenase family 33 495 4.3E-161 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AM393_RS22625 493a60772b6c7b886e9271858d54a565 499 Gene3D G3DSA:3.40.309.10 288 481 5.5E-64 T 28-03-2018 AM393_RS07315 267c3951b59465b1a860e1bfa498a941 284 PIRSF PIRSF001359 1 284 5.7E-113 T 28-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AM393_RS07315 267c3951b59465b1a860e1bfa498a941 284 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 283 2.7E-104 T 28-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AM393_RS07315 267c3951b59465b1a860e1bfa498a941 284 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 131 142 - T 28-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AM393_RS07315 267c3951b59465b1a860e1bfa498a941 284 Pfam PF01116 Fructose-bisphosphate aldolase class-II 6 283 8.8E-99 T 28-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AM393_RS07315 267c3951b59465b1a860e1bfa498a941 284 Hamap MF_01294 D-tagatose-1,6-bisphosphate aldolase subunit GatY [gatY]. 1 284 68.05 T 28-03-2018 IPR023955 D-tagatose-bisphosphate aldolase, class II, subunit GatY GO:0009025|GO:0019404|GO:2001059 KEGG: 00052+4.1.2.40|MetaCyc: PWY-7077|MetaCyc: PWY-7395 AM393_RS07315 267c3951b59465b1a860e1bfa498a941 284 Gene3D G3DSA:3.20.20.70 1 284 3.0E-105 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM393_RS07315 267c3951b59465b1a860e1bfa498a941 284 SUPERFAMILY SSF51569 1 283 7.62E-100 T 28-03-2018 AM393_RS07315 267c3951b59465b1a860e1bfa498a941 284 TIGRFAM TIGR01858 tag_bisphos_ald: class II aldolase, tagatose bisphosphate family 3 283 2.7E-151 T 28-03-2018 IPR011288 D-tagatose-bisphosphate aldolase, class II, subunit KbaY/GatY GO:0005975|GO:0008270|GO:0009025 KEGG: 00052+4.1.2.40|MetaCyc: PWY-7077|MetaCyc: PWY-7395 AM393_RS03980 e8eb4fc6dbc07de2d1038011a2690ef1 255 Gene3D G3DSA:3.40.1280.10 1 169 1.4E-73 T 28-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AM393_RS03980 e8eb4fc6dbc07de2d1038011a2690ef1 255 Gene3D G3DSA:1.10.1270.20 170 254 2.1E-36 T 28-03-2018 AM393_RS03980 e8eb4fc6dbc07de2d1038011a2690ef1 255 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 235 8.3E-113 T 28-03-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 AM393_RS03980 e8eb4fc6dbc07de2d1038011a2690ef1 255 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 221 6.0E-72 T 28-03-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 AM393_RS03980 e8eb4fc6dbc07de2d1038011a2690ef1 255 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 255 121.858 T 28-03-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 AM393_RS03980 e8eb4fc6dbc07de2d1038011a2690ef1 255 PIRSF PIRSF000386 1 253 1.2E-104 T 28-03-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 AM393_RS03980 e8eb4fc6dbc07de2d1038011a2690ef1 255 SUPERFAMILY SSF75217 1 247 3.79E-103 T 28-03-2018 IPR029028 Alpha/beta knot methyltransferases AM393_RS14760 1827947232fc79cb240ccdc08218f30d 363 SUPERFAMILY SSF53659 2 360 3.6E-121 T 28-03-2018 AM393_RS14760 1827947232fc79cb240ccdc08218f30d 363 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 6 355 2.4E-138 T 28-03-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 AM393_RS14760 1827947232fc79cb240ccdc08218f30d 363 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 6 354 6.4E-170 T 28-03-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 AM393_RS14760 1827947232fc79cb240ccdc08218f30d 363 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 247 266 - T 28-03-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 AM393_RS14760 1827947232fc79cb240ccdc08218f30d 363 SMART SM01329 6 355 5.4E-199 T 28-03-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 AM393_RS14760 1827947232fc79cb240ccdc08218f30d 363 Gene3D G3DSA:3.40.718.10 1 363 5.9E-131 T 28-03-2018 AM393_RS14760 1827947232fc79cb240ccdc08218f30d 363 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 5 359 51.541 T 28-03-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 AM393_RS21505 6de9696428e4ab6fe740f5f45872ecc1 752 Gene3D G3DSA:3.40.50.880 599 752 1.3E-13 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AM393_RS21505 6de9696428e4ab6fe740f5f45872ecc1 752 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 410 418 - T 28-03-2018 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AM393_RS21505 6de9696428e4ab6fe740f5f45872ecc1 752 ProSitePatterns PS00438 Catalase proximal active site signature. 116 132 - T 28-03-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AM393_RS21505 6de9696428e4ab6fe740f5f45872ecc1 752 SUPERFAMILY SSF52317 598 703 4.98E-12 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AM393_RS21505 6de9696428e4ab6fe740f5f45872ecc1 752 SUPERFAMILY SSF56634 46 582 3.27E-226 T 28-03-2018 IPR020835 Catalase-like domain GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AM393_RS21505 6de9696428e4ab6fe740f5f45872ecc1 752 Pfam PF00199 Catalase 80 465 1.2E-178 T 28-03-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AM393_RS21505 6de9696428e4ab6fe740f5f45872ecc1 752 Pfam PF06628 Catalase-related immune-responsive 498 561 1.3E-17 T 28-03-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AM393_RS21505 6de9696428e4ab6fe740f5f45872ecc1 752 PRINTS PR00067 Catalase signature 156 174 2.1E-68 T 28-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AM393_RS21505 6de9696428e4ab6fe740f5f45872ecc1 752 PRINTS PR00067 Catalase signature 397 423 2.1E-68 T 28-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AM393_RS21505 6de9696428e4ab6fe740f5f45872ecc1 752 PRINTS PR00067 Catalase signature 177 194 2.1E-68 T 28-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AM393_RS21505 6de9696428e4ab6fe740f5f45872ecc1 752 PRINTS PR00067 Catalase signature 196 214 2.1E-68 T 28-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AM393_RS21505 6de9696428e4ab6fe740f5f45872ecc1 752 PRINTS PR00067 Catalase signature 93 116 2.1E-68 T 28-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AM393_RS21505 6de9696428e4ab6fe740f5f45872ecc1 752 PRINTS PR00067 Catalase signature 365 392 2.1E-68 T 28-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AM393_RS21505 6de9696428e4ab6fe740f5f45872ecc1 752 Gene3D G3DSA:2.40.180.10 50 435 9.9E-166 T 28-03-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AM393_RS21505 6de9696428e4ab6fe740f5f45872ecc1 752 PIRSF PIRSF038927 43 750 0.0 T 28-03-2018 IPR024712 Catalase, mono-functional, haem-containing, clade 2 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 AM393_RS21505 6de9696428e4ab6fe740f5f45872ecc1 752 SMART SM01060 80 468 1.2E-275 T 28-03-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AM393_RS08415 4fbb1a058893d339d3d48236d6394341 601 Gene3D G3DSA:1.20.91.10 228 308 2.0E-11 T 28-03-2018 AM393_RS08415 4fbb1a058893d339d3d48236d6394341 601 Gene3D G3DSA:3.40.50.720 397 562 2.8E-19 T 28-03-2018 AM393_RS08415 4fbb1a058893d339d3d48236d6394341 601 Pfam PF02254 TrkA-N domain 403 514 1.1E-24 T 28-03-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AM393_RS08415 4fbb1a058893d339d3d48236d6394341 601 SUPERFAMILY SSF51735 402 530 2.88E-30 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS08415 4fbb1a058893d339d3d48236d6394341 601 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 14 283 2.8E-92 T 28-03-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 AM393_RS08415 4fbb1a058893d339d3d48236d6394341 601 Hamap MF_01412 Glutathione-regulated potassium-efflux system protein KefB [kefB]. 2 598 46.802 T 28-03-2018 IPR020884 Glutathione-regulated potassium-efflux system protein KefB GO:0005886|GO:0006813|GO:0015503 AM393_RS08415 4fbb1a058893d339d3d48236d6394341 601 Pfam PF00999 Sodium/hydrogen exchanger family 12 373 6.4E-66 T 28-03-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AM393_RS24500 6dbeb12b256ac7071318d8bab13c26b2 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 14 73 3.3E-16 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS24500 6dbeb12b256ac7071318d8bab13c26b2 297 Gene3D G3DSA:3.40.190.10 100 180 6.7E-12 T 28-03-2018 AM393_RS24500 6dbeb12b256ac7071318d8bab13c26b2 297 SUPERFAMILY SSF46785 12 120 2.2E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS24500 6dbeb12b256ac7071318d8bab13c26b2 297 Pfam PF03466 LysR substrate binding domain 96 291 6.0E-23 T 28-03-2018 IPR005119 LysR, substrate-binding AM393_RS24500 6dbeb12b256ac7071318d8bab13c26b2 297 Gene3D G3DSA:1.10.10.10 3 97 3.6E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS24500 6dbeb12b256ac7071318d8bab13c26b2 297 SUPERFAMILY SSF53850 98 294 8.53E-24 T 28-03-2018 AM393_RS24500 6dbeb12b256ac7071318d8bab13c26b2 297 Gene3D G3DSA:3.40.190.10 181 260 6.4E-12 T 28-03-2018 AM393_RS28465 ca4f1914aecedf2801c4e1b57f90dddc 236 SUPERFAMILY SSF52540 4 83 1.01E-9 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS28465 ca4f1914aecedf2801c4e1b57f90dddc 236 Gene3D G3DSA:3.40.50.300 3 207 6.9E-13 T 28-03-2018 AM393_RS28465 ca4f1914aecedf2801c4e1b57f90dddc 236 Pfam PF13175 AAA ATPase domain 4 52 7.7E-10 T 28-03-2018 AM393_RS26560 2b7b8b436e645aa237b49261c49cd3ab 290 SUPERFAMILY SSF56112 13 281 2.53E-41 T 28-03-2018 IPR011009 Protein kinase-like domain AM393_RS26560 2b7b8b436e645aa237b49261c49cd3ab 290 Gene3D G3DSA:3.90.1200.10 95 283 4.8E-17 T 28-03-2018 AM393_RS26560 2b7b8b436e645aa237b49261c49cd3ab 290 Gene3D G3DSA:3.30.200.20 1 92 1.4E-18 T 28-03-2018 AM393_RS26560 2b7b8b436e645aa237b49261c49cd3ab 290 Pfam PF03881 Fructosamine kinase 1 286 2.6E-114 T 28-03-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 AM393_RS26560 2b7b8b436e645aa237b49261c49cd3ab 290 PIRSF PIRSF006221 1 289 1.6E-92 T 28-03-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 AM393_RS12565 b80754a0d614dc3c8205445b117d91ac 598 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 205 410 2.7E-19 T 28-03-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 AM393_RS12565 b80754a0d614dc3c8205445b117d91ac 598 SUPERFAMILY SSF74863 27 140 6.54E-41 T 28-03-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain AM393_RS12565 b80754a0d614dc3c8205445b117d91ac 598 Gene3D G3DSA:2.60.40.1250 20 144 2.3E-38 T 28-03-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain AM393_RS12565 b80754a0d614dc3c8205445b117d91ac 598 Gene3D G3DSA:3.40.30.10 474 598 2.9E-17 T 28-03-2018 AM393_RS12565 b80754a0d614dc3c8205445b117d91ac 598 Pfam PF11412 Disulphide bond corrector protein DsbC 29 138 3.1E-35 T 28-03-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain AM393_RS12565 b80754a0d614dc3c8205445b117d91ac 598 Pfam PF13899 Thioredoxin-like 495 570 2.0E-13 T 28-03-2018 AM393_RS12565 b80754a0d614dc3c8205445b117d91ac 598 ProSitePatterns PS00194 Thioredoxin family active site. 505 523 - T 28-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AM393_RS12565 b80754a0d614dc3c8205445b117d91ac 598 Hamap MF_00399 Thiol:disulfide interchange protein DsbD [dsbD]. 1 597 39.992 T 28-03-2018 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 AM393_RS12565 b80754a0d614dc3c8205445b117d91ac 598 SUPERFAMILY SSF52833 480 594 2.12E-23 T 28-03-2018 IPR012336 Thioredoxin-like fold AM393_RS16560 5f831afc128c1717cc395b22f397d51b 163 Pfam PF09619 Type III secretion system lipoprotein chaperone (YscW) 47 151 2.1E-42 T 28-03-2018 AM393_RS04100 f24b98f2703bd0ad3b2d3134be821d5c 287 Pfam PF01261 Xylose isomerase-like TIM barrel 22 190 2.3E-8 T 28-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AM393_RS04100 f24b98f2703bd0ad3b2d3134be821d5c 287 SUPERFAMILY SSF51658 6 191 1.01E-20 T 28-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AM393_RS04100 f24b98f2703bd0ad3b2d3134be821d5c 287 Gene3D G3DSA:3.20.20.150 1 251 4.4E-24 T 28-03-2018 AM393_RS08330 45d53e98b9ae88d2567b52bea3a6f87c 103 SUPERFAMILY SSF54999 5 101 1.26E-36 T 28-03-2018 IPR027486 Ribosomal protein S10 domain AM393_RS08330 45d53e98b9ae88d2567b52bea3a6f87c 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 27.353 T 28-03-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM393_RS08330 45d53e98b9ae88d2567b52bea3a6f87c 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 28-03-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM393_RS08330 45d53e98b9ae88d2567b52bea3a6f87c 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 1.0E-46 T 28-03-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM393_RS08330 45d53e98b9ae88d2567b52bea3a6f87c 103 SMART SM01403 7 101 1.0E-56 T 28-03-2018 IPR027486 Ribosomal protein S10 domain AM393_RS08330 45d53e98b9ae88d2567b52bea3a6f87c 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 1.2E-18 T 28-03-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM393_RS08330 45d53e98b9ae88d2567b52bea3a6f87c 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 1.2E-18 T 28-03-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM393_RS08330 45d53e98b9ae88d2567b52bea3a6f87c 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 1.2E-18 T 28-03-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM393_RS08330 45d53e98b9ae88d2567b52bea3a6f87c 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 100 2.1E-35 T 28-03-2018 IPR027486 Ribosomal protein S10 domain AM393_RS08330 45d53e98b9ae88d2567b52bea3a6f87c 103 Gene3D G3DSA:3.30.70.600 3 102 1.4E-35 T 28-03-2018 IPR027486 Ribosomal protein S10 domain AM393_RS08630 13b14a2bf9e2bec9cff757150ab4631e 157 Pfam PF03449 Transcription elongation factor, N-terminal 5 74 1.7E-26 T 28-03-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 AM393_RS08630 13b14a2bf9e2bec9cff757150ab4631e 157 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 81 155 3.7E-22 T 28-03-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 AM393_RS08630 13b14a2bf9e2bec9cff757150ab4631e 157 SUPERFAMILY SSF54534 80 155 3.27E-20 T 28-03-2018 AM393_RS08630 13b14a2bf9e2bec9cff757150ab4631e 157 PIRSF PIRSF006092 1 157 5.3E-45 T 28-03-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 AM393_RS08630 13b14a2bf9e2bec9cff757150ab4631e 157 TIGRFAM TIGR01461 greB: transcription elongation factor GreB 2 157 1.2E-85 T 28-03-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 AM393_RS08630 13b14a2bf9e2bec9cff757150ab4631e 157 Hamap MF_00930 Transcription elongation factor GreB [greB]. 1 156 53.917 T 28-03-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 AM393_RS08630 13b14a2bf9e2bec9cff757150ab4631e 157 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 119 135 - T 28-03-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 AM393_RS08630 13b14a2bf9e2bec9cff757150ab4631e 157 Gene3D G3DSA:3.10.50.30 76 157 3.2E-21 T 28-03-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 AM393_RS08630 13b14a2bf9e2bec9cff757150ab4631e 157 SUPERFAMILY SSF46557 3 78 6.93E-28 T 28-03-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 AM393_RS08630 13b14a2bf9e2bec9cff757150ab4631e 157 Gene3D G3DSA:1.10.287.180 3 75 3.5E-29 T 28-03-2018 AM393_RS08630 13b14a2bf9e2bec9cff757150ab4631e 157 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 154 28.74 T 28-03-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 AM393_RS24930 872c3f980bc03fc202966385e3a678c7 1246 Gene3D G3DSA:2.40.40.20 1047 1237 7.8E-46 T 28-03-2018 AM393_RS24930 872c3f980bc03fc202966385e3a678c7 1246 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 48 66 - T 28-03-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 AM393_RS24930 872c3f980bc03fc202966385e3a678c7 1246 Pfam PF01568 Molydopterin dinucleotide binding domain 1087 1199 1.7E-20 T 28-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 AM393_RS24930 872c3f980bc03fc202966385e3a678c7 1246 TIGRFAM TIGR01580 narG: nitrate reductase, alpha subunit 2 1234 0.0 T 28-03-2018 IPR006468 Nitrate reductase, alpha subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.99.4 AM393_RS24930 872c3f980bc03fc202966385e3a678c7 1246 Gene3D G3DSA:3.40.228.10 225 659 2.8E-104 T 28-03-2018 AM393_RS24930 872c3f980bc03fc202966385e3a678c7 1246 SUPERFAMILY SSF53706 5 1069 0.0 T 28-03-2018 AM393_RS24930 872c3f980bc03fc202966385e3a678c7 1246 Gene3D G3DSA:2.20.25.90 55 98 1.3E-28 T 28-03-2018 AM393_RS24930 872c3f980bc03fc202966385e3a678c7 1246 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 776 793 - T 28-03-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 AM393_RS24930 872c3f980bc03fc202966385e3a678c7 1246 Gene3D G3DSA:3.30.2070.10 794 834 1.8E-4 T 28-03-2018 AM393_RS24930 872c3f980bc03fc202966385e3a678c7 1246 Pfam PF14710 Respiratory nitrate reductase alpha N-terminal 4 40 1.4E-16 T 28-03-2018 IPR028189 Nitrate reductase, alpha subunit, N-terminal KEGG: 00910+1.7.99.4 AM393_RS24930 872c3f980bc03fc202966385e3a678c7 1246 SMART SM00926 43 105 6.6E-8 T 28-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM393_RS24930 872c3f980bc03fc202966385e3a678c7 1246 Gene3D G3DSA:4.10.1200.10 1 26 5.7E-15 T 28-03-2018 AM393_RS24930 872c3f980bc03fc202966385e3a678c7 1246 Gene3D G3DSA:3.40.50.740 108 213 7.9E-4 T 28-03-2018 AM393_RS24930 872c3f980bc03fc202966385e3a678c7 1246 Pfam PF00384 Molybdopterin oxidoreductase 108 831 2.0E-170 T 28-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM393_RS24930 872c3f980bc03fc202966385e3a678c7 1246 SUPERFAMILY SSF50692 1082 1235 3.39E-46 T 28-03-2018 IPR009010 Aspartate decarboxylase-like domain AM393_RS16790 b30969723ecfc3675f607ae7418ba93b 550 ProSitePatterns PS00785 5'-nucleotidase signature 1. 34 46 - T 28-03-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM393_RS16790 b30969723ecfc3675f607ae7418ba93b 550 Gene3D G3DSA:3.90.780.10 363 549 9.6E-49 T 28-03-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM393_RS16790 b30969723ecfc3675f607ae7418ba93b 550 Gene3D G3DSA:3.60.21.10 26 362 8.7E-83 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like AM393_RS16790 b30969723ecfc3675f607ae7418ba93b 550 PRINTS PR01607 Apyrase family signature 238 261 1.1E-62 T 28-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM393_RS16790 b30969723ecfc3675f607ae7418ba93b 550 PRINTS PR01607 Apyrase family signature 417 440 1.1E-62 T 28-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM393_RS16790 b30969723ecfc3675f607ae7418ba93b 550 PRINTS PR01607 Apyrase family signature 207 224 1.1E-62 T 28-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM393_RS16790 b30969723ecfc3675f607ae7418ba93b 550 PRINTS PR01607 Apyrase family signature 283 303 1.1E-62 T 28-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM393_RS16790 b30969723ecfc3675f607ae7418ba93b 550 PRINTS PR01607 Apyrase family signature 484 503 1.1E-62 T 28-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM393_RS16790 b30969723ecfc3675f607ae7418ba93b 550 PRINTS PR01607 Apyrase family signature 32 50 1.1E-62 T 28-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM393_RS16790 b30969723ecfc3675f607ae7418ba93b 550 SUPERFAMILY SSF56300 27 360 5.22E-96 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like AM393_RS16790 b30969723ecfc3675f607ae7418ba93b 550 SUPERFAMILY SSF55816 363 543 1.2E-54 T 28-03-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM393_RS16790 b30969723ecfc3675f607ae7418ba93b 550 Pfam PF00149 Calcineurin-like phosphoesterase 35 254 4.8E-17 T 28-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AM393_RS16790 b30969723ecfc3675f607ae7418ba93b 550 Pfam PF02872 5'-nucleotidase, C-terminal domain 363 507 8.8E-33 T 28-03-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM393_RS16790 b30969723ecfc3675f607ae7418ba93b 550 ProSitePatterns PS00786 5'-nucleotidase signature 2. 109 120 - T 28-03-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM393_RS16625 73a7696e3c8b746dc5d6d665378072bc 435 Gene3D G3DSA:1.10.3720.10 191 428 7.0E-41 T 28-03-2018 AM393_RS16625 73a7696e3c8b746dc5d6d665378072bc 435 Gene3D G3DSA:1.20.58.370 18 167 4.6E-11 T 28-03-2018 IPR035277 Maltose transport system permease protein MalF N-terminal domain AM393_RS16625 73a7696e3c8b746dc5d6d665378072bc 435 SUPERFAMILY SSF161098 182 418 2.75E-54 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS16625 73a7696e3c8b746dc5d6d665378072bc 435 SUPERFAMILY SSF160964 130 186 2.35E-8 T 28-03-2018 AM393_RS16625 73a7696e3c8b746dc5d6d665378072bc 435 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 219 418 5.3E-22 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS11425 8b3ebe773c4a465d31cfd4fb1b75662f 238 Gene3D G3DSA:3.40.50.1000 5 44 0.05 T 28-03-2018 IPR023214 HAD-like domain AM393_RS11425 8b3ebe773c4a465d31cfd4fb1b75662f 238 SUPERFAMILY SSF56784 10 238 9.13E-42 T 28-03-2018 IPR023214 HAD-like domain AM393_RS11425 8b3ebe773c4a465d31cfd4fb1b75662f 238 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 116 207 3.1E-9 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM393_RS11425 8b3ebe773c4a465d31cfd4fb1b75662f 238 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 100 201 1.5E-11 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM393_RS11425 8b3ebe773c4a465d31cfd4fb1b75662f 238 Pfam PF13419 Haloacid dehalogenase-like hydrolase 15 207 3.6E-14 T 28-03-2018 IPR023214 HAD-like domain AM393_RS11425 8b3ebe773c4a465d31cfd4fb1b75662f 238 Gene3D G3DSA:3.40.50.1000 90 237 1.6E-21 T 28-03-2018 IPR023214 HAD-like domain AM393_RS14790 a0489664d83e4fbd94da8cb090920d27 163 Pfam PF10369 Small subunit of acetolactate synthase 84 158 6.0E-24 T 28-03-2018 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 AM393_RS14790 a0489664d83e4fbd94da8cb090920d27 163 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 1 159 2.8E-68 T 28-03-2018 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 AM393_RS14790 a0489664d83e4fbd94da8cb090920d27 163 Gene3D G3DSA:3.30.70.260 2 87 7.7E-24 T 28-03-2018 AM393_RS14790 a0489664d83e4fbd94da8cb090920d27 163 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 76 3.0E-36 T 28-03-2018 AM393_RS14790 a0489664d83e4fbd94da8cb090920d27 163 SUPERFAMILY SSF55021 2 74 1.42E-22 T 28-03-2018 AM393_RS14790 a0489664d83e4fbd94da8cb090920d27 163 Pfam PF13710 ACT domain 12 73 3.1E-16 T 28-03-2018 AM393_RS14790 a0489664d83e4fbd94da8cb090920d27 163 SUPERFAMILY SSF55021 79 162 2.96E-26 T 28-03-2018 AM393_RS14790 a0489664d83e4fbd94da8cb090920d27 163 Gene3D G3DSA:3.30.70.1150 88 161 5.3E-25 T 28-03-2018 AM393_RS16745 4fc3b11b588c0411e4c7692c3407f2cc 635 Pfam PF12168 DNA polymerase III subunits tau domain IV DnaB-binding 410 490 2.4E-21 T 28-03-2018 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM393_RS16745 4fc3b11b588c0411e4c7692c3407f2cc 635 SUPERFAMILY SSF48019 243 365 1.19E-35 T 28-03-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 AM393_RS16745 4fc3b11b588c0411e4c7692c3407f2cc 635 SUPERFAMILY SSF52540 35 221 5.18E-57 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS16745 4fc3b11b588c0411e4c7692c3407f2cc 635 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 232 361 1.7E-32 T 28-03-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 AM393_RS16745 4fc3b11b588c0411e4c7692c3407f2cc 635 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 41 59 1.8E-5 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 AM393_RS16745 4fc3b11b588c0411e4c7692c3407f2cc 635 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 124 142 1.8E-5 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 AM393_RS16745 4fc3b11b588c0411e4c7692c3407f2cc 635 Gene3D G3DSA:1.10.8.60 167 242 2.9E-20 T 28-03-2018 AM393_RS16745 4fc3b11b588c0411e4c7692c3407f2cc 635 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 356 1.7E-132 T 28-03-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 AM393_RS16745 4fc3b11b588c0411e4c7692c3407f2cc 635 Pfam PF13177 DNA polymerase III, delta subunit 20 178 4.6E-42 T 28-03-2018 AM393_RS16745 4fc3b11b588c0411e4c7692c3407f2cc 635 SMART SM00382 37 178 1.4E-7 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS16745 4fc3b11b588c0411e4c7692c3407f2cc 635 Gene3D G3DSA:1.20.272.10 243 363 7.4E-14 T 28-03-2018 AM393_RS16745 4fc3b11b588c0411e4c7692c3407f2cc 635 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 492 632 2.9E-59 T 28-03-2018 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM393_RS16745 4fc3b11b588c0411e4c7692c3407f2cc 635 Gene3D G3DSA:3.40.50.300 1 166 1.4E-39 T 28-03-2018 AM393_RS22330 8d4704eb35917d690e250933397bca83 792 Gene3D G3DSA:3.55.50.10 111 207 7.4E-26 T 28-03-2018 AM393_RS22330 8d4704eb35917d690e250933397bca83 792 Gene3D G3DSA:4.10.180.10 297 312 5.5E-7 T 28-03-2018 AM393_RS22330 8d4704eb35917d690e250933397bca83 792 SUPERFAMILY SSF69255 383 473 3.4E-26 T 28-03-2018 AM393_RS22330 8d4704eb35917d690e250933397bca83 792 Gene3D G3DSA:2.40.50.230 389 473 4.9E-22 T 28-03-2018 IPR006531 Gp5 N-terminal AM393_RS22330 8d4704eb35917d690e250933397bca83 792 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 17 515 2.4E-76 T 28-03-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset AM393_RS22330 8d4704eb35917d690e250933397bca83 792 Pfam PF10106 Uncharacterized protein conserved in bacteria (DUF2345) 612 758 6.4E-46 T 28-03-2018 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal AM393_RS22330 8d4704eb35917d690e250933397bca83 792 SUPERFAMILY SSF69279 203 384 1.65E-44 T 28-03-2018 AM393_RS22330 8d4704eb35917d690e250933397bca83 792 Pfam PF13296 Putative type VI secretion system Rhs element Vgr 491 588 2.7E-33 T 28-03-2018 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain AM393_RS22330 8d4704eb35917d690e250933397bca83 792 Pfam PF05954 Phage late control gene D protein (GPD) 34 356 6.2E-64 T 28-03-2018 AM393_RS22330 8d4704eb35917d690e250933397bca83 792 SUPERFAMILY SSF69279 15 192 4.68E-50 T 28-03-2018 AM393_RS22330 8d4704eb35917d690e250933397bca83 792 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 26 517 3.4E-143 T 28-03-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein AM393_RS00710 445c9f97c6e37a0f78388317fb9bb560 595 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 585 3.2E-276 T 28-03-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 AM393_RS00710 445c9f97c6e37a0f78388317fb9bb560 595 SUPERFAMILY SSF55261 288 419 1.13E-46 T 28-03-2018 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 AM393_RS00710 445c9f97c6e37a0f78388317fb9bb560 595 PRINTS PR01042 Aspartyl-tRNA synthetase signature 190 202 1.2E-26 T 28-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM393_RS00710 445c9f97c6e37a0f78388317fb9bb560 595 PRINTS PR01042 Aspartyl-tRNA synthetase signature 518 532 1.2E-26 T 28-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM393_RS00710 445c9f97c6e37a0f78388317fb9bb560 595 PRINTS PR01042 Aspartyl-tRNA synthetase signature 207 220 1.2E-26 T 28-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM393_RS00710 445c9f97c6e37a0f78388317fb9bb560 595 PRINTS PR01042 Aspartyl-tRNA synthetase signature 474 490 1.2E-26 T 28-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM393_RS00710 445c9f97c6e37a0f78388317fb9bb560 595 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 1 584 33.505 T 28-03-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 AM393_RS00710 445c9f97c6e37a0f78388317fb9bb560 595 Gene3D G3DSA:2.40.50.140 1 108 3.3E-27 T 28-03-2018 AM393_RS00710 445c9f97c6e37a0f78388317fb9bb560 595 Pfam PF01336 OB-fold nucleic acid binding domain 18 102 4.3E-16 T 28-03-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 AM393_RS00710 445c9f97c6e37a0f78388317fb9bb560 595 SUPERFAMILY SSF55681 108 287 6.51E-106 T 28-03-2018 AM393_RS00710 445c9f97c6e37a0f78388317fb9bb560 595 SUPERFAMILY SSF55681 420 584 6.51E-106 T 28-03-2018 AM393_RS00710 445c9f97c6e37a0f78388317fb9bb560 595 Pfam PF00152 tRNA synthetases class II (D, K and N) 118 558 1.2E-106 T 28-03-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM393_RS00710 445c9f97c6e37a0f78388317fb9bb560 595 Gene3D G3DSA:3.30.930.10 131 586 1.6E-101 T 28-03-2018 AM393_RS00710 445c9f97c6e37a0f78388317fb9bb560 595 Pfam PF02938 GAD domain 307 406 4.0E-31 T 28-03-2018 IPR029351 GAD domain Reactome: R-HSA-379726 AM393_RS00710 445c9f97c6e37a0f78388317fb9bb560 595 SUPERFAMILY SSF50249 1 105 1.9E-34 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM393_RS28045 c058c43e6d7a0b6f00a65d3be0802fce 965 Pfam PF13700 Domain of unknown function (DUF4158) 6 169 1.3E-46 T 28-03-2018 IPR025296 Domain of unknown function DUF4158 AM393_RS28045 c058c43e6d7a0b6f00a65d3be0802fce 965 Pfam PF01526 Tn3 transposase DDE domain 571 957 1.1E-128 T 28-03-2018 IPR002513 Tn3 transposase DDE domain GO:0004803|GO:0006313 AM393_RS19285 909d89ff1d7432c00f20e7944ccaf567 787 Pfam PF01055 Glycosyl hydrolases family 31 238 681 1.8E-116 T 28-03-2018 IPR000322 Glycoside hydrolase family 31 GO:0004553|GO:0005975 AM393_RS19285 909d89ff1d7432c00f20e7944ccaf567 787 Gene3D G3DSA:3.20.20.80 244 616 1.9E-104 T 28-03-2018 AM393_RS19285 909d89ff1d7432c00f20e7944ccaf567 787 Gene3D G3DSA:2.60.40.1760 7 243 3.9E-47 T 28-03-2018 AM393_RS19285 909d89ff1d7432c00f20e7944ccaf567 787 Gene3D G3DSA:2.60.40.1180 617 679 7.0E-24 T 28-03-2018 AM393_RS19285 909d89ff1d7432c00f20e7944ccaf567 787 SUPERFAMILY SSF51011 597 678 7.91E-20 T 28-03-2018 AM393_RS19285 909d89ff1d7432c00f20e7944ccaf567 787 Gene3D G3DSA:2.60.40.1180 680 781 7.3E-10 T 28-03-2018 AM393_RS19285 909d89ff1d7432c00f20e7944ccaf567 787 Pfam PF13802 Galactose mutarotase-like 146 213 3.2E-23 T 28-03-2018 IPR025887 Glycoside hydrolase family 31, N-terminal domain AM393_RS19285 909d89ff1d7432c00f20e7944ccaf567 787 Pfam PF17137 Domain of unknown function (DUF5110) 701 765 1.9E-7 T 28-03-2018 IPR033403 Domain of unknown function DUF5110 AM393_RS19285 909d89ff1d7432c00f20e7944ccaf567 787 SUPERFAMILY SSF74650 2 243 1.1E-48 T 28-03-2018 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 AM393_RS19285 909d89ff1d7432c00f20e7944ccaf567 787 SUPERFAMILY SSF51445 247 594 2.46E-69 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily AM393_RS05545 efe2d9513961e600ea3655ef5f88af74 413 Gene3D G3DSA:1.20.1250.20 203 403 7.4E-19 T 28-03-2018 AM393_RS05545 efe2d9513961e600ea3655ef5f88af74 413 TIGRFAM TIGR00882 2A0105: oligosaccharide:H+ symporter 9 396 3.9E-127 T 28-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 AM393_RS05545 efe2d9513961e600ea3655ef5f88af74 413 Pfam PF01306 LacY proton/sugar symporter 9 400 2.3E-126 T 28-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 AM393_RS05545 efe2d9513961e600ea3655ef5f88af74 413 SUPERFAMILY SSF103473 8 400 7.72E-38 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS05545 efe2d9513961e600ea3655ef5f88af74 413 PRINTS PR00174 LacY proton/sugar symporter family signature 280 306 1.3E-73 T 28-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 AM393_RS05545 efe2d9513961e600ea3655ef5f88af74 413 PRINTS PR00174 LacY proton/sugar symporter family signature 311 330 1.3E-73 T 28-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 AM393_RS05545 efe2d9513961e600ea3655ef5f88af74 413 PRINTS PR00174 LacY proton/sugar symporter family signature 103 125 1.3E-73 T 28-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 AM393_RS05545 efe2d9513961e600ea3655ef5f88af74 413 PRINTS PR00174 LacY proton/sugar symporter family signature 69 98 1.3E-73 T 28-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 AM393_RS05545 efe2d9513961e600ea3655ef5f88af74 413 PRINTS PR00174 LacY proton/sugar symporter family signature 256 277 1.3E-73 T 28-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 AM393_RS05545 efe2d9513961e600ea3655ef5f88af74 413 PRINTS PR00174 LacY proton/sugar symporter family signature 145 163 1.3E-73 T 28-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 AM393_RS05545 efe2d9513961e600ea3655ef5f88af74 413 PRINTS PR00174 LacY proton/sugar symporter family signature 211 239 1.3E-73 T 28-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 AM393_RS05545 efe2d9513961e600ea3655ef5f88af74 413 PRINTS PR00174 LacY proton/sugar symporter family signature 342 362 1.3E-73 T 28-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 AM393_RS05545 efe2d9513961e600ea3655ef5f88af74 413 Gene3D G3DSA:1.20.1250.20 6 201 1.6E-16 T 28-03-2018 AM393_RS27920 50e2091495d875deab993fdf3356c84f 227 Gene3D G3DSA:3.10.450.50 69 227 7.2E-14 T 28-03-2018 AM393_RS27920 50e2091495d875deab993fdf3356c84f 227 SUPERFAMILY SSF101327 15 148 3.92E-20 T 28-03-2018 IPR011978 Uncharacterised protein family UPF0149 AM393_RS27920 50e2091495d875deab993fdf3356c84f 227 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 13 185 3.0E-39 T 28-03-2018 IPR011978 Uncharacterised protein family UPF0149 AM393_RS27920 50e2091495d875deab993fdf3356c84f 227 Pfam PF03695 Uncharacterised protein family (UPF0149) 15 185 7.0E-29 T 28-03-2018 IPR011978 Uncharacterised protein family UPF0149 AM393_RS27920 50e2091495d875deab993fdf3356c84f 227 Pfam PF02810 SEC-C motif 209 226 2.5E-10 T 28-03-2018 IPR004027 SEC-C motif AM393_RS27920 50e2091495d875deab993fdf3356c84f 227 SUPERFAMILY SSF103642 207 226 1.19E-7 T 28-03-2018 AM393_RS01860 bae532f484176bae50a5b93473d51c0f 618 Gene3D G3DSA:3.30.565.10 427 617 3.3E-36 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS01860 bae532f484176bae50a5b93473d51c0f 618 SUPERFAMILY SSF47384 388 463 1.37E-11 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM393_RS01860 bae532f484176bae50a5b93473d51c0f 618 SUPERFAMILY SSF55874 453 616 8.25E-33 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS01860 bae532f484176bae50a5b93473d51c0f 618 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 512 616 2.1E-21 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS01860 bae532f484176bae50a5b93473d51c0f 618 Pfam PF07696 7TMR-DISM extracellular 2 21 154 3.1E-17 T 28-03-2018 IPR011622 7TM-DISM receptor, extracellular domain, type 2 AM393_RS01860 bae532f484176bae50a5b93473d51c0f 618 Gene3D G3DSA:3.30.450.20 66 426 2.2E-5 T 28-03-2018 AM393_RS01860 bae532f484176bae50a5b93473d51c0f 618 PRINTS PR00344 Bacterial sensor protein C-terminal signature 602 615 8.8E-10 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM393_RS01860 bae532f484176bae50a5b93473d51c0f 618 PRINTS PR00344 Bacterial sensor protein C-terminal signature 578 596 8.8E-10 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM393_RS01860 bae532f484176bae50a5b93473d51c0f 618 PRINTS PR00344 Bacterial sensor protein C-terminal signature 544 558 8.8E-10 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM393_RS01860 bae532f484176bae50a5b93473d51c0f 618 SMART SM00388 398 463 1.4E-10 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM393_RS01860 bae532f484176bae50a5b93473d51c0f 618 Pfam PF00512 His Kinase A (phospho-acceptor) domain 399 460 1.8E-9 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM393_RS01860 bae532f484176bae50a5b93473d51c0f 618 SMART SM00387 508 618 9.8E-34 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS08495 323f8ae8c50d1d8a91abbf6fdb71279e 395 SUPERFAMILY SSF103473 4 386 9.29E-37 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS08495 323f8ae8c50d1d8a91abbf6fdb71279e 395 Gene3D G3DSA:1.20.1250.20 199 389 5.1E-13 T 28-03-2018 AM393_RS08495 323f8ae8c50d1d8a91abbf6fdb71279e 395 Pfam PF07690 Major Facilitator Superfamily 14 320 1.5E-20 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS08495 323f8ae8c50d1d8a91abbf6fdb71279e 395 Hamap MF_01044 Protein TsgA [tsgA]. 1 389 29.841 T 28-03-2018 IPR023528 Major facilitator superfamily transporter, TsgA AM393_RS08495 323f8ae8c50d1d8a91abbf6fdb71279e 395 Gene3D G3DSA:1.20.1250.20 1 198 1.4E-19 T 28-03-2018 AM393_RS03400 84f0a98ebb7817963017ed29c0f89b97 353 Pfam PF01594 AI-2E family transporter 20 345 2.4E-84 T 28-03-2018 IPR002549 Transmembrane protein TqsA-like AM393_RS04455 ae9286562e907719c5f04d9b42849905 120 SUPERFAMILY SSF141530 4 118 2.62E-37 T 28-03-2018 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component GO:0005737|GO:0008982|GO:0009401 KEGG: 00051+2.7.1.198|KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 AM393_RS04455 ae9286562e907719c5f04d9b42849905 120 Pfam PF03829 PTS system glucitol/sorbitol-specific IIA component 4 113 2.1E-40 T 28-03-2018 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component GO:0005737|GO:0008982|GO:0009401 KEGG: 00051+2.7.1.198|KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 AM393_RS04455 ae9286562e907719c5f04d9b42849905 120 ProDom PD015842 PTS IIA COMPONENT GLUCITOL/SORBITOL-SPECIFIC SYSTEM ENZYME TRANSFERASE SYSTEM PHOSPHOTRANSFERASE EIIA 6 118 3.0E-47 T 28-03-2018 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component GO:0005737|GO:0008982|GO:0009401 KEGG: 00051+2.7.1.198|KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 AM393_RS04455 ae9286562e907719c5f04d9b42849905 120 Gene3D G3DSA:2.40.33.40 3 118 4.6E-41 T 28-03-2018 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component GO:0005737|GO:0008982|GO:0009401 KEGG: 00051+2.7.1.198|KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 AM393_RS23235 30cf37c1d867b21e0607e0ef3e88c23c 205 SUPERFAMILY SSF54862 3 195 3.56E-68 T 28-03-2018 AM393_RS23235 30cf37c1d867b21e0607e0ef3e88c23c 205 TIGRFAM TIGR02951 DMSO_dmsB: dimethylsulfoxide reductase, chain B 4 163 1.9E-78 T 28-03-2018 IPR014297 Dimethylsulphoxide reductase, chain B AM393_RS23235 30cf37c1d867b21e0607e0ef3e88c23c 205 Pfam PF12800 4Fe-4S binding domain 12 25 0.0036 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM393_RS23235 30cf37c1d867b21e0607e0ef3e88c23c 205 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 99 110 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM393_RS23235 30cf37c1d867b21e0607e0ef3e88c23c 205 Pfam PF13247 4Fe-4S dicluster domain 59 153 4.4E-28 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM393_RS23235 30cf37c1d867b21e0607e0ef3e88c23c 205 Gene3D G3DSA:3.30.70.20 81 118 1.5E-20 T 28-03-2018 AM393_RS23235 30cf37c1d867b21e0607e0ef3e88c23c 205 Gene3D G3DSA:3.30.70.20 119 201 6.4E-17 T 28-03-2018 AM393_RS23235 30cf37c1d867b21e0607e0ef3e88c23c 205 Gene3D G3DSA:3.30.70.20 3 80 2.8E-18 T 28-03-2018 AM393_RS24155 d0d240063a09cb37a15cc1071d583598 300 Gene3D G3DSA:1.10.10.10 1 87 2.4E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS24155 d0d240063a09cb37a15cc1071d583598 300 SUPERFAMILY SSF46785 5 86 1.9E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS24155 d0d240063a09cb37a15cc1071d583598 300 Gene3D G3DSA:3.40.190.10 174 267 2.5E-19 T 28-03-2018 AM393_RS24155 d0d240063a09cb37a15cc1071d583598 300 SUPERFAMILY SSF53850 93 299 9.77E-35 T 28-03-2018 AM393_RS24155 d0d240063a09cb37a15cc1071d583598 300 Pfam PF03466 LysR substrate binding domain 93 298 2.8E-34 T 28-03-2018 IPR005119 LysR, substrate-binding AM393_RS24155 d0d240063a09cb37a15cc1071d583598 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 65 1.9E-15 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS24155 d0d240063a09cb37a15cc1071d583598 300 Gene3D G3DSA:3.40.190.10 88 173 6.4E-9 T 28-03-2018 AM393_RS01960 92154d869036dbfe51ddc329cb012f33 427 Pfam PF07690 Major Facilitator Superfamily 25 313 1.0E-19 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS01960 92154d869036dbfe51ddc329cb012f33 427 SUPERFAMILY SSF103473 6 413 2.09E-44 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS01960 92154d869036dbfe51ddc329cb012f33 427 Gene3D G3DSA:1.20.1250.20 206 427 3.0E-20 T 28-03-2018 AM393_RS01960 92154d869036dbfe51ddc329cb012f33 427 Gene3D G3DSA:1.20.1250.20 11 205 3.8E-19 T 28-03-2018 AM393_RS01960 92154d869036dbfe51ddc329cb012f33 427 TIGRFAM TIGR00897 2A0118: polyol permease 1 406 2.5E-192 T 28-03-2018 IPR004748 Polyol permease GO:0005215|GO:0006810|GO:0016021 AM393_RS15075 716b09e27d8bc93ea18fd38e4622d68a 256 Pfam PF01061 ABC-2 type transporter 9 218 6.7E-39 T 28-03-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 AM393_RS15075 716b09e27d8bc93ea18fd38e4622d68a 256 PIRSF PIRSF006648 10 252 2.8E-21 T 28-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AM393_RS15075 716b09e27d8bc93ea18fd38e4622d68a 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 58 80 2.4E-8 T 28-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AM393_RS15075 716b09e27d8bc93ea18fd38e4622d68a 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 176 195 2.4E-8 T 28-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AM393_RS15075 716b09e27d8bc93ea18fd38e4622d68a 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 139 163 2.4E-8 T 28-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AM393_RS15075 716b09e27d8bc93ea18fd38e4622d68a 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 196 215 2.4E-8 T 28-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AM393_RS13575 6a38eea1a8414a9880f2a83d014dc017 460 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 109 208 2.0E-44 T 28-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 AM393_RS13575 6a38eea1a8414a9880f2a83d014dc017 460 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 358 453 0.005 T 28-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 AM393_RS13575 6a38eea1a8414a9880f2a83d014dc017 460 Gene3D G3DSA:2.40.170.10 81 460 4.9E-79 T 28-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 AM393_RS13575 6a38eea1a8414a9880f2a83d014dc017 460 Pfam PF02264 LamB porin 83 460 4.7E-79 T 28-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 AM393_RS13575 6a38eea1a8414a9880f2a83d014dc017 460 SUPERFAMILY SSF56935 81 460 3.63E-90 T 28-03-2018 AM393_RS26535 990542eca7bdd9db264b8419c1797014 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 329 357 1.1E-54 T 28-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AM393_RS26535 990542eca7bdd9db264b8419c1797014 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 362 385 1.1E-54 T 28-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AM393_RS26535 990542eca7bdd9db264b8419c1797014 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 507 520 1.1E-54 T 28-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AM393_RS26535 990542eca7bdd9db264b8419c1797014 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 464 492 1.1E-54 T 28-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AM393_RS26535 990542eca7bdd9db264b8419c1797014 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 534 546 1.1E-54 T 28-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AM393_RS26535 990542eca7bdd9db264b8419c1797014 642 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 172 219 4.3E-14 T 28-03-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 AM393_RS26535 990542eca7bdd9db264b8419c1797014 642 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 318 528 7.9E-51 T 28-03-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM393_RS26535 990542eca7bdd9db264b8419c1797014 642 Gene3D G3DSA:3.10.20.30 1 64 1.9E-20 T 28-03-2018 IPR012675 Beta-grasp domain AM393_RS26535 990542eca7bdd9db264b8419c1797014 642 SUPERFAMILY SSF55681 243 525 1.81E-97 T 28-03-2018 AM393_RS26535 990542eca7bdd9db264b8419c1797014 642 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 66 634 34.192 T 28-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AM393_RS26535 990542eca7bdd9db264b8419c1797014 642 Gene3D G3DSA:3.30.980.10 146 222 7.4E-17 T 28-03-2018 AM393_RS26535 990542eca7bdd9db264b8419c1797014 642 Gene3D G3DSA:3.30.980.10 65 145 1.9E-22 T 28-03-2018 AM393_RS26535 990542eca7bdd9db264b8419c1797014 642 SUPERFAMILY SSF55186 63 241 4.06E-65 T 28-03-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 AM393_RS26535 990542eca7bdd9db264b8419c1797014 642 Pfam PF03129 Anticodon binding domain 541 630 2.3E-23 T 28-03-2018 IPR004154 Anticodon-binding AM393_RS26535 990542eca7bdd9db264b8419c1797014 642 SUPERFAMILY SSF52954 530 636 3.17E-34 T 28-03-2018 IPR004154 Anticodon-binding AM393_RS26535 990542eca7bdd9db264b8419c1797014 642 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 72 631 1.7E-247 T 28-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AM393_RS26535 990542eca7bdd9db264b8419c1797014 642 Gene3D G3DSA:3.30.930.10 223 531 2.1E-121 T 28-03-2018 AM393_RS26535 990542eca7bdd9db264b8419c1797014 642 SUPERFAMILY SSF81271 3 61 2.42E-16 T 28-03-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 AM393_RS26535 990542eca7bdd9db264b8419c1797014 642 SMART SM00863 170 219 1.6E-19 T 28-03-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 AM393_RS26535 990542eca7bdd9db264b8419c1797014 642 Pfam PF02824 TGS domain 4 61 7.2E-13 T 28-03-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 AM393_RS26535 990542eca7bdd9db264b8419c1797014 642 Gene3D G3DSA:3.40.50.800 532 642 3.7E-30 T 28-03-2018 IPR004154 Anticodon-binding AM393_RS07370 4c0154e83f4e7de91ec2ce35f12a4635 287 SUPERFAMILY SSF53790 12 232 6.54E-84 T 28-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AM393_RS07370 4c0154e83f4e7de91ec2ce35f12a4635 287 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 91 102 - T 28-03-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AM393_RS07370 4c0154e83f4e7de91ec2ce35f12a4635 287 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 14 213 1.9E-29 T 28-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AM393_RS07370 4c0154e83f4e7de91ec2ce35f12a4635 287 PIRSF PIRSF005917 1 287 2.5E-107 T 28-03-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AM393_RS07370 4c0154e83f4e7de91ec2ce35f12a4635 287 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 14 283 8.6E-114 T 28-03-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AM393_RS07370 4c0154e83f4e7de91ec2ce35f12a4635 287 Gene3D G3DSA:3.30.950.10 122 237 4.2E-41 T 28-03-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AM393_RS07370 4c0154e83f4e7de91ec2ce35f12a4635 287 Gene3D G3DSA:3.40.1010.10 11 121 2.1E-45 T 28-03-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AM393_RS07370 4c0154e83f4e7de91ec2ce35f12a4635 287 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 13 234 38.543 T 28-03-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AM393_RS01690 40d4e0d8032c0cbe36929a25b3188acd 377 Pfam PF00534 Glycosyl transferases group 1 189 353 2.1E-26 T 28-03-2018 IPR001296 Glycosyl transferase, family 1 AM393_RS01690 40d4e0d8032c0cbe36929a25b3188acd 377 Gene3D G3DSA:3.40.50.2000 20 186 3.2E-8 T 28-03-2018 AM393_RS01690 40d4e0d8032c0cbe36929a25b3188acd 377 SUPERFAMILY SSF53756 22 375 3.14E-56 T 28-03-2018 AM393_RS01690 40d4e0d8032c0cbe36929a25b3188acd 377 Gene3D G3DSA:3.40.50.2000 187 358 2.3E-30 T 28-03-2018 AM393_RS01690 40d4e0d8032c0cbe36929a25b3188acd 377 Pfam PF13477 Glycosyl transferase 4-like 3 150 1.9E-18 T 28-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 AM393_RS00225 10eeed31f275cc054e84e8ee3c1b5eb4 248 Gene3D G3DSA:3.60.20.10 2 229 1.0E-34 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AM393_RS00225 10eeed31f275cc054e84e8ee3c1b5eb4 248 SUPERFAMILY SSF56235 2 239 6.92E-31 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AM393_RS00225 10eeed31f275cc054e84e8ee3c1b5eb4 248 Pfam PF00227 Proteasome subunit 4 185 7.0E-6 T 28-03-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-446652|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8941858|Reactome: R-HSA-8951664|Reactome: R-HSA-983168 AM393_RS00225 10eeed31f275cc054e84e8ee3c1b5eb4 248 PIRSF PIRSF009120 1 247 2.0E-108 T 28-03-2018 IPR016545 Uncharacterised conserved protein UCP009120, proteasome-type protease, Sll0069 AM393_RS15170 4140d49dd6345c4e95ba5a4f479a73ec 121 SUPERFAMILY SSF54523 37 118 8.24E-25 T 28-03-2018 AM393_RS15170 4140d49dd6345c4e95ba5a4f479a73ec 121 Pfam PF02501 Type II secretion system (T2SS), protein I 40 118 3.4E-25 T 28-03-2018 IPR003413 Type II secretion system protein I domain GO:0008565|GO:0015627|GO:0015628 AM393_RS15170 4140d49dd6345c4e95ba5a4f479a73ec 121 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site AM393_RS15170 4140d49dd6345c4e95ba5a4f479a73ec 121 Gene3D G3DSA:3.30.1300.30 33 119 5.2E-25 T 28-03-2018 AM393_RS15170 4140d49dd6345c4e95ba5a4f479a73ec 121 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 27 5.0E-8 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site AM393_RS15170 4140d49dd6345c4e95ba5a4f479a73ec 121 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 26 1.4E-5 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site AM393_RS15170 4140d49dd6345c4e95ba5a4f479a73ec 121 TIGRFAM TIGR01707 gspI: type II secretion system protein I 6 105 5.0E-25 T 28-03-2018 IPR010052 Type II secretion system protein I GO:0008565|GO:0015627|GO:0015628 AM393_RS23270 6decfcdb48782c90412f20ff73fbdddd 427 Pfam PF07690 Major Facilitator Superfamily 28 387 5.8E-54 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS23270 6decfcdb48782c90412f20ff73fbdddd 427 SUPERFAMILY SSF103473 15 423 3.14E-80 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS23270 6decfcdb48782c90412f20ff73fbdddd 427 Gene3D G3DSA:1.20.1250.20 15 215 5.4E-39 T 28-03-2018 AM393_RS23270 6decfcdb48782c90412f20ff73fbdddd 427 Gene3D G3DSA:1.20.1250.20 225 427 1.1E-27 T 28-03-2018 AM393_RS23270 6decfcdb48782c90412f20ff73fbdddd 427 PIRSF PIRSF002808 8 427 1.8E-35 T 28-03-2018 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 AM393_RS16365 9f0c9c856c808583386282aaac7b44f0 163 SUPERFAMILY SSF89963 91 163 4.71E-29 T 28-03-2018 IPR007551 Protein of unknown function DUF520 AM393_RS16365 9f0c9c856c808583386282aaac7b44f0 163 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 163 30.486 T 28-03-2018 IPR007551 Protein of unknown function DUF520 AM393_RS16365 9f0c9c856c808583386282aaac7b44f0 163 Pfam PF04461 Protein of unknown function (DUF520) 2 162 4.8E-65 T 28-03-2018 IPR007551 Protein of unknown function DUF520 AM393_RS16365 9f0c9c856c808583386282aaac7b44f0 163 Gene3D G3DSA:3.30.70.860 98 162 8.6E-34 T 28-03-2018 IPR035571 UPF0234/UPF0381 domain AM393_RS16365 9f0c9c856c808583386282aaac7b44f0 163 Gene3D G3DSA:3.30.70.990 10 97 1.5E-30 T 28-03-2018 IPR035570 UPF0234 N-terminal domain AM393_RS16365 9f0c9c856c808583386282aaac7b44f0 163 SUPERFAMILY SSF89963 2 89 2.88E-30 T 28-03-2018 IPR007551 Protein of unknown function DUF520 AM393_RS26095 33036624c46c2af065b71ef008059afc 255 Gene3D G3DSA:3.40.190.10 16 168 3.4E-38 T 28-03-2018 AM393_RS26095 33036624c46c2af065b71ef008059afc 255 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 27 246 3.8E-62 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM393_RS26095 33036624c46c2af065b71ef008059afc 255 SMART SM00062 25 248 1.9E-60 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM393_RS26095 33036624c46c2af065b71ef008059afc 255 SUPERFAMILY SSF53850 1 248 7.25E-66 T 28-03-2018 AM393_RS26095 33036624c46c2af065b71ef008059afc 255 Gene3D G3DSA:3.40.190.10 169 251 2.3E-13 T 28-03-2018 AM393_RS26095 33036624c46c2af065b71ef008059afc 255 SMART SM00079 25 247 6.4E-6 T 28-03-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 AM393_RS14855 b4da67a997ac527020d9af0dae190585 491 SUPERFAMILY SSF51984 20 106 2.75E-29 T 28-03-2018 AM393_RS14855 b4da67a997ac527020d9af0dae190585 491 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 21 475 3.2E-184 T 28-03-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM393_RS14855 b4da67a997ac527020d9af0dae190585 491 Pfam PF01225 Mur ligase family, catalytic domain 21 118 1.4E-29 T 28-03-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 AM393_RS14855 b4da67a997ac527020d9af0dae190585 491 Gene3D G3DSA:3.90.190.20 325 479 2.1E-37 T 28-03-2018 AM393_RS14855 b4da67a997ac527020d9af0dae190585 491 Pfam PF02875 Mur ligase family, glutamate ligase domain 338 418 3.5E-21 T 28-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AM393_RS14855 b4da67a997ac527020d9af0dae190585 491 SUPERFAMILY SSF53623 105 322 1.83E-74 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AM393_RS14855 b4da67a997ac527020d9af0dae190585 491 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 19 481 43.451 T 28-03-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM393_RS14855 b4da67a997ac527020d9af0dae190585 491 Pfam PF08245 Mur ligase middle domain 124 304 6.9E-30 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AM393_RS14855 b4da67a997ac527020d9af0dae190585 491 Gene3D G3DSA:3.40.50.720 1 107 1.7E-18 T 28-03-2018 AM393_RS14855 b4da67a997ac527020d9af0dae190585 491 Gene3D G3DSA:3.40.1190.10 108 324 1.7E-55 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AM393_RS14855 b4da67a997ac527020d9af0dae190585 491 SUPERFAMILY SSF53244 323 476 3.11E-46 T 28-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AM393_RS13180 af953b65b985cffe8c45a851320fa9ba 102 Gene3D G3DSA:3.40.50.2300 3 102 1.4E-34 T 28-03-2018 AM393_RS13180 af953b65b985cffe8c45a851320fa9ba 102 SUPERFAMILY SSF52794 2 101 8.37E-32 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AM393_RS13180 af953b65b985cffe8c45a851320fa9ba 102 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 3 95 1.5E-20 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AM393_RS19345 3fa569b0aa430e64547a42cc16187f97 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 304 6.8E-42 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS19345 3fa569b0aa430e64547a42cc16187f97 306 SUPERFAMILY SSF161098 91 288 5.63E-22 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS19345 3fa569b0aa430e64547a42cc16187f97 306 Gene3D G3DSA:1.10.3720.10 2 293 1.5E-45 T 28-03-2018 AM393_RS25825 c982d8c31250c20a06842fe56f60e2ba 294 Gene3D G3DSA:3.40.190.10 176 266 1.5E-21 T 28-03-2018 AM393_RS25825 c982d8c31250c20a06842fe56f60e2ba 294 Gene3D G3DSA:3.40.190.10 89 175 4.1E-23 T 28-03-2018 AM393_RS25825 c982d8c31250c20a06842fe56f60e2ba 294 SUPERFAMILY SSF53850 90 292 6.91E-42 T 28-03-2018 AM393_RS25825 c982d8c31250c20a06842fe56f60e2ba 294 Pfam PF03466 LysR substrate binding domain 89 289 3.9E-41 T 28-03-2018 IPR005119 LysR, substrate-binding AM393_RS25825 c982d8c31250c20a06842fe56f60e2ba 294 SUPERFAMILY SSF46785 1 84 8.79E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS25825 c982d8c31250c20a06842fe56f60e2ba 294 Gene3D G3DSA:1.10.10.10 1 86 2.3E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS25825 c982d8c31250c20a06842fe56f60e2ba 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 3.1E-18 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS25825 c982d8c31250c20a06842fe56f60e2ba 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.9E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS25825 c982d8c31250c20a06842fe56f60e2ba 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.9E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS25825 c982d8c31250c20a06842fe56f60e2ba 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.9E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS21935 f1ab9f66180e98665ed597b3c119d675 378 Gene3D G3DSA:3.40.50.1820 36 377 4.2E-34 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AM393_RS21935 f1ab9f66180e98665ed597b3c119d675 378 SUPERFAMILY SSF53474 305 378 3.8E-44 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AM393_RS21935 f1ab9f66180e98665ed597b3c119d675 378 SUPERFAMILY SSF53474 32 199 3.8E-44 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AM393_RS00665 df25d07a81c0fbe0c1a63b71d460812e 439 Pfam PF08525 Opacity-associated protein A N-terminal motif 12 39 8.7E-9 T 28-03-2018 IPR013731 Opacity-associated protein A, N-terminal AM393_RS00665 df25d07a81c0fbe0c1a63b71d460812e 439 SMART SM00257 97 142 7.8E-7 T 28-03-2018 IPR018392 LysM domain AM393_RS00665 df25d07a81c0fbe0c1a63b71d460812e 439 Gene3D G3DSA:2.70.70.10 279 436 1.7E-45 T 28-03-2018 AM393_RS00665 df25d07a81c0fbe0c1a63b71d460812e 439 SUPERFAMILY SSF51261 163 407 3.09E-70 T 28-03-2018 IPR011055 Duplicated hybrid motif AM393_RS00665 df25d07a81c0fbe0c1a63b71d460812e 439 Gene3D G3DSA:3.10.350.10 85 191 8.0E-8 T 28-03-2018 AM393_RS00665 df25d07a81c0fbe0c1a63b71d460812e 439 Pfam PF01551 Peptidase family M23 312 406 2.6E-33 T 28-03-2018 IPR016047 Peptidase M23 AM393_RS00665 df25d07a81c0fbe0c1a63b71d460812e 439 Pfam PF01476 LysM domain 98 141 1.5E-8 T 28-03-2018 IPR018392 LysM domain AM393_RS00665 df25d07a81c0fbe0c1a63b71d460812e 439 SUPERFAMILY SSF54106 96 139 1.57E-5 T 28-03-2018 IPR018392 LysM domain AM393_RS01525 d876d5d34af7bba1c9a45299463651b7 110 Gene3D G3DSA:2.60.120.10 7 110 3.7E-33 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AM393_RS01525 d876d5d34af7bba1c9a45299463651b7 110 PIRSF PIRSF020632 3 107 1.8E-41 T 28-03-2018 IPR014510 Tellurite resistance predicted, YeaR AM393_RS01525 d876d5d34af7bba1c9a45299463651b7 110 Pfam PF09313 Domain of unknown function (DUF1971) 14 98 9.6E-24 T 28-03-2018 IPR015392 Domain of unknown function DUF1971 AM393_RS01525 d876d5d34af7bba1c9a45299463651b7 110 SUPERFAMILY SSF51197 4 108 5.08E-33 T 28-03-2018 AM393_RS23825 7790f22ea51749728862d2bb28bffadd 551 SUPERFAMILY SSF55073 141 295 7.85E-40 T 28-03-2018 IPR029787 Nucleotide cyclase AM393_RS23825 7790f22ea51749728862d2bb28bffadd 551 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 11 129 7.5E-16 T 28-03-2018 IPR000014 PAS domain AM393_RS23825 7790f22ea51749728862d2bb28bffadd 551 SMART SM00052 304 546 1.2E-100 T 28-03-2018 IPR001633 EAL domain AM393_RS23825 7790f22ea51749728862d2bb28bffadd 551 Pfam PF00563 EAL domain 310 541 9.2E-72 T 28-03-2018 IPR001633 EAL domain AM393_RS23825 7790f22ea51749728862d2bb28bffadd 551 Gene3D G3DSA:3.30.450.20 10 149 5.5E-22 T 28-03-2018 AM393_RS23825 7790f22ea51749728862d2bb28bffadd 551 Gene3D G3DSA:3.30.70.270 150 302 5.6E-48 T 28-03-2018 AM393_RS23825 7790f22ea51749728862d2bb28bffadd 551 Pfam PF00990 Diguanylate cyclase, GGDEF domain 136 286 2.1E-36 T 28-03-2018 IPR000160 GGDEF domain AM393_RS23825 7790f22ea51749728862d2bb28bffadd 551 SUPERFAMILY SSF141868 311 547 7.72E-85 T 28-03-2018 IPR001633 EAL domain AM393_RS23825 7790f22ea51749728862d2bb28bffadd 551 Pfam PF13426 PAS domain 22 124 6.1E-12 T 28-03-2018 IPR000014 PAS domain AM393_RS23825 7790f22ea51749728862d2bb28bffadd 551 SUPERFAMILY SSF55785 20 124 6.63E-20 T 28-03-2018 IPR000014 PAS domain AM393_RS23825 7790f22ea51749728862d2bb28bffadd 551 Gene3D G3DSA:3.20.20.450 303 550 2.0E-91 T 28-03-2018 IPR001633 EAL domain AM393_RS23825 7790f22ea51749728862d2bb28bffadd 551 SMART SM00267 125 294 4.2E-44 T 28-03-2018 IPR000160 GGDEF domain AM393_RS23825 7790f22ea51749728862d2bb28bffadd 551 SMART SM00086 83 125 0.0032 T 28-03-2018 IPR001610 PAC motif AM393_RS23825 7790f22ea51749728862d2bb28bffadd 551 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 133 287 8.1E-35 T 28-03-2018 IPR000160 GGDEF domain AM393_RS07335 dfb4cc0cd409653d49b183f25641163a 423 SUPERFAMILY SSF51569 1 418 4.21E-166 T 28-03-2018 AM393_RS07335 dfb4cc0cd409653d49b183f25641163a 423 PIRSF PIRSF009264 1 423 9.4E-191 T 28-03-2018 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 AM393_RS07335 dfb4cc0cd409653d49b183f25641163a 423 Hamap MF_01296 D-tagatose-1,6-bisphosphate aldolase subunit GatZ [gatZ]. 1 420 71.365 T 28-03-2018 IPR023436 D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit GatZ GO:0019402 AM393_RS07335 dfb4cc0cd409653d49b183f25641163a 423 TIGRFAM TIGR02810 agaZ_gatZ: D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit 3 418 1.7E-205 T 28-03-2018 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 AM393_RS07335 dfb4cc0cd409653d49b183f25641163a 423 Gene3D G3DSA:1.10.400.20 290 403 4.1E-44 T 28-03-2018 AM393_RS07335 dfb4cc0cd409653d49b183f25641163a 423 Pfam PF08013 Tagatose 6 phosphate kinase 1 418 2.2E-195 T 28-03-2018 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 AM393_RS07335 dfb4cc0cd409653d49b183f25641163a 423 Gene3D G3DSA:3.20.20.70 1 289 5.8E-70 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM393_RS25380 ed7c50b0663208c66c1ecb3899b37ee4 71 Pfam PF05321 Haemolysin expression modulating protein 8 68 3.0E-28 T 28-03-2018 IPR007985 Haemolysin expression modulating, HHA AM393_RS25380 ed7c50b0663208c66c1ecb3899b37ee4 71 SUPERFAMILY SSF68989 2 71 8.76E-22 T 28-03-2018 IPR007985 Haemolysin expression modulating, HHA AM393_RS25380 ed7c50b0663208c66c1ecb3899b37ee4 71 Gene3D G3DSA:1.20.1280.40 1 70 3.3E-28 T 28-03-2018 IPR007985 Haemolysin expression modulating, HHA AM393_RS06615 30a6ae9c226ee6f58bb71ce98646b006 303 Pfam PF03466 LysR substrate binding domain 90 292 5.2E-47 T 28-03-2018 IPR005119 LysR, substrate-binding AM393_RS06615 30a6ae9c226ee6f58bb71ce98646b006 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 4.6E-18 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS06615 30a6ae9c226ee6f58bb71ce98646b006 303 SUPERFAMILY SSF53850 90 295 4.16E-48 T 28-03-2018 AM393_RS06615 30a6ae9c226ee6f58bb71ce98646b006 303 Gene3D G3DSA:3.40.190.10 176 263 3.5E-27 T 28-03-2018 AM393_RS06615 30a6ae9c226ee6f58bb71ce98646b006 303 SUPERFAMILY SSF46785 4 85 3.22E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS06615 30a6ae9c226ee6f58bb71ce98646b006 303 Gene3D G3DSA:1.10.10.10 3 84 1.4E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS06615 30a6ae9c226ee6f58bb71ce98646b006 303 Gene3D G3DSA:3.40.190.10 89 175 1.0E-16 T 28-03-2018 AM393_RS00110 b14e43b6aa917762647b0f09139751b2 232 Gene3D G3DSA:3.30.2350.10 16 231 1.8E-54 T 28-03-2018 AM393_RS00110 b14e43b6aa917762647b0f09139751b2 232 Pfam PF00849 RNA pseudouridylate synthase 25 180 3.9E-26 T 28-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM393_RS00110 b14e43b6aa917762647b0f09139751b2 232 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 63 77 - T 28-03-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM393_RS00110 b14e43b6aa917762647b0f09139751b2 232 SUPERFAMILY SSF55120 18 231 2.72E-57 T 28-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM393_RS09850 d479b1c7292a6fa04e73c3ae8c2d4cae 329 ProSitePatterns PS00757 Prokaryotic sulfate-binding proteins signature 2. 145 153 - T 28-03-2018 IPR034408 Sulphate/thiosulphate-binding site GO:1901681 AM393_RS09850 d479b1c7292a6fa04e73c3ae8c2d4cae 329 SUPERFAMILY SSF53850 21 327 1.78E-94 T 28-03-2018 AM393_RS09850 d479b1c7292a6fa04e73c3ae8c2d4cae 329 Gene3D G3DSA:3.40.190.10 20 125 2.2E-25 T 28-03-2018 AM393_RS09850 d479b1c7292a6fa04e73c3ae8c2d4cae 329 Gene3D G3DSA:3.40.190.10 126 245 4.4E-28 T 28-03-2018 AM393_RS09850 d479b1c7292a6fa04e73c3ae8c2d4cae 329 Gene3D G3DSA:3.40.190.10 246 329 7.3E-27 T 28-03-2018 AM393_RS09850 d479b1c7292a6fa04e73c3ae8c2d4cae 329 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 12 326 7.2E-189 T 28-03-2018 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 AM393_RS09850 d479b1c7292a6fa04e73c3ae8c2d4cae 329 Pfam PF13531 Bacterial extracellular solute-binding protein 32 280 4.7E-47 T 28-03-2018 AM393_RS09850 d479b1c7292a6fa04e73c3ae8c2d4cae 329 ProSitePatterns PS00401 Prokaryotic sulfate-binding proteins signature 1. 48 60 - T 28-03-2018 IPR000957 Sulphate/thiosulphate-binding, conserved site AM393_RS05405 b7b864a77d9cb0e4cd40e7fa65e56b75 264 Gene3D G3DSA:3.30.572.10 1 264 4.6E-135 T 28-03-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AM393_RS05405 b7b864a77d9cb0e4cd40e7fa65e56b75 264 Hamap MF_00008 Thymidylate synthase [thyA]. 1 264 40.514 T 28-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AM393_RS05405 b7b864a77d9cb0e4cd40e7fa65e56b75 264 Pfam PF00303 Thymidylate synthase 2 264 3.2E-128 T 28-03-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AM393_RS05405 b7b864a77d9cb0e4cd40e7fa65e56b75 264 PRINTS PR00108 Thymidylate synthase family signature 115 134 1.9E-47 T 28-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AM393_RS05405 b7b864a77d9cb0e4cd40e7fa65e56b75 264 PRINTS PR00108 Thymidylate synthase family signature 197 214 1.9E-47 T 28-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AM393_RS05405 b7b864a77d9cb0e4cd40e7fa65e56b75 264 PRINTS PR00108 Thymidylate synthase family signature 159 185 1.9E-47 T 28-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AM393_RS05405 b7b864a77d9cb0e4cd40e7fa65e56b75 264 PRINTS PR00108 Thymidylate synthase family signature 141 156 1.9E-47 T 28-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AM393_RS05405 b7b864a77d9cb0e4cd40e7fa65e56b75 264 PRINTS PR00108 Thymidylate synthase family signature 42 63 1.9E-47 T 28-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AM393_RS05405 b7b864a77d9cb0e4cd40e7fa65e56b75 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 85 3.8E-42 T 28-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AM393_RS05405 b7b864a77d9cb0e4cd40e7fa65e56b75 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 84 264 1.2E-93 T 28-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AM393_RS05405 b7b864a77d9cb0e4cd40e7fa65e56b75 264 ProSitePatterns PS00091 Thymidylate synthase active site. 126 154 - T 28-03-2018 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AM393_RS05405 b7b864a77d9cb0e4cd40e7fa65e56b75 264 SUPERFAMILY SSF55831 1 264 3.14E-132 T 28-03-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AM393_RS21405 d91cd35266ef93894a45ae2be180b6b4 392 SUPERFAMILY SSF53850 36 389 9.83E-31 T 28-03-2018 AM393_RS21405 d91cd35266ef93894a45ae2be180b6b4 392 Gene3D G3DSA:3.40.190.10 28 170 0.0012 T 28-03-2018 AM393_RS21405 d91cd35266ef93894a45ae2be180b6b4 392 Pfam PF13416 Bacterial extracellular solute-binding protein 67 344 5.7E-15 T 28-03-2018 AM393_RS21405 d91cd35266ef93894a45ae2be180b6b4 392 PIRSF PIRSF029172 3 392 1.4E-183 T 28-03-2018 IPR027020 Protein ynjB AM393_RS21405 d91cd35266ef93894a45ae2be180b6b4 392 Gene3D G3DSA:3.40.190.10 171 345 3.7E-14 T 28-03-2018 AM393_RS04460 ff60749ae929bf00c92bf6fa9a7407be 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 1.7E-18 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS04460 ff60749ae929bf00c92bf6fa9a7407be 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.7E-18 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS04460 ff60749ae929bf00c92bf6fa9a7407be 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 220 240 1.7E-18 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS04460 ff60749ae929bf00c92bf6fa9a7407be 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 1.7E-18 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS04460 ff60749ae929bf00c92bf6fa9a7407be 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 1.7E-18 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS04460 ff60749ae929bf00c92bf6fa9a7407be 259 Pfam PF00106 short chain dehydrogenase 3 197 3.0E-48 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS04460 ff60749ae929bf00c92bf6fa9a7407be 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 1.4E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS04460 ff60749ae929bf00c92bf6fa9a7407be 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 1.4E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS04460 ff60749ae929bf00c92bf6fa9a7407be 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 1.4E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS04460 ff60749ae929bf00c92bf6fa9a7407be 259 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM393_RS04460 ff60749ae929bf00c92bf6fa9a7407be 259 Gene3D G3DSA:3.40.50.720 1 259 1.2E-53 T 28-03-2018 AM393_RS04460 ff60749ae929bf00c92bf6fa9a7407be 259 SUPERFAMILY SSF51735 2 258 1.25E-62 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS06825 6c707a215b029c5fbdb5822058fefa79 217 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 11 213 43.637 T 28-03-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AM393_RS06825 6c707a215b029c5fbdb5822058fefa79 217 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 17 208 1.8E-83 T 28-03-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AM393_RS06825 6c707a215b029c5fbdb5822058fefa79 217 SUPERFAMILY SSF55821 7 213 4.35E-87 T 28-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain AM393_RS06825 6c707a215b029c5fbdb5822058fefa79 217 Gene3D G3DSA:3.90.870.10 3 217 4.5E-94 T 28-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain AM393_RS06825 6c707a215b029c5fbdb5822058fefa79 217 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 13 209 6.1E-85 T 28-03-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AM393_RS23570 18504cd1b62944935397d034dd9abc91 292 Gene3D G3DSA:3.40.190.10 173 260 1.1E-14 T 28-03-2018 AM393_RS23570 18504cd1b62944935397d034dd9abc91 292 SUPERFAMILY SSF53850 85 285 1.71E-37 T 28-03-2018 AM393_RS23570 18504cd1b62944935397d034dd9abc91 292 SUPERFAMILY SSF46785 1 108 4.99E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS23570 18504cd1b62944935397d034dd9abc91 292 Pfam PF03466 LysR substrate binding domain 85 284 1.9E-43 T 28-03-2018 IPR005119 LysR, substrate-binding AM393_RS23570 18504cd1b62944935397d034dd9abc91 292 Gene3D G3DSA:3.40.190.10 78 172 4.0E-17 T 28-03-2018 AM393_RS23570 18504cd1b62944935397d034dd9abc91 292 Gene3D G3DSA:1.10.10.10 1 77 4.3E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS23570 18504cd1b62944935397d034dd9abc91 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 9.8E-18 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS26365 046b402bb9be76408beca7c52f86813a 345 Pfam PF01032 FecCD transport family 25 341 1.0E-88 T 28-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 AM393_RS26365 046b402bb9be76408beca7c52f86813a 345 Gene3D G3DSA:1.10.3470.10 7 345 5.7E-70 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AM393_RS26365 046b402bb9be76408beca7c52f86813a 345 SUPERFAMILY SSF81345 10 341 1.57E-76 T 28-03-2018 IPR029022 ABC transporter, BtuC-like AM393_RS23590 d62c6dad5cacf35103499e06241d3cc3 457 SMART SM00267 277 450 5.7E-31 T 28-03-2018 IPR000160 GGDEF domain AM393_RS23590 d62c6dad5cacf35103499e06241d3cc3 457 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 288 449 7.8E-31 T 28-03-2018 IPR000160 GGDEF domain AM393_RS23590 d62c6dad5cacf35103499e06241d3cc3 457 SUPERFAMILY SSF55073 294 449 1.18E-31 T 28-03-2018 IPR029787 Nucleotide cyclase AM393_RS23590 d62c6dad5cacf35103499e06241d3cc3 457 Gene3D G3DSA:3.30.70.270 282 454 3.9E-38 T 28-03-2018 AM393_RS23590 d62c6dad5cacf35103499e06241d3cc3 457 Pfam PF00990 Diguanylate cyclase, GGDEF domain 288 446 8.2E-29 T 28-03-2018 IPR000160 GGDEF domain AM393_RS23410 cfea99075846b64e617250b4d12bc74b 1035 PRINTS PR00132 Glycosyl hydrolase family 2 signature 539 554 1.3E-37 T 28-03-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-6798695 AM393_RS23410 cfea99075846b64e617250b4d12bc74b 1035 PRINTS PR00132 Glycosyl hydrolase family 2 signature 352 366 1.3E-37 T 28-03-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-6798695 AM393_RS23410 cfea99075846b64e617250b4d12bc74b 1035 PRINTS PR00132 Glycosyl hydrolase family 2 signature 153 168 1.3E-37 T 28-03-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-6798695 AM393_RS23410 cfea99075846b64e617250b4d12bc74b 1035 PRINTS PR00132 Glycosyl hydrolase family 2 signature 455 470 1.3E-37 T 28-03-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-6798695 AM393_RS23410 cfea99075846b64e617250b4d12bc74b 1035 PRINTS PR00132 Glycosyl hydrolase family 2 signature 383 401 1.3E-37 T 28-03-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-6798695 AM393_RS23410 cfea99075846b64e617250b4d12bc74b 1035 SUPERFAMILY SSF74650 745 1033 1.11E-88 T 28-03-2018 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 AM393_RS23410 cfea99075846b64e617250b4d12bc74b 1035 Gene3D G3DSA:2.60.120.260 9 225 5.8E-61 T 28-03-2018 IPR008979 Galactose-binding domain-like AM393_RS23410 cfea99075846b64e617250b4d12bc74b 1035 SMART SM01038 760 1033 6.2E-115 T 28-03-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AM393_RS23410 cfea99075846b64e617250b4d12bc74b 1035 Gene3D G3DSA:2.60.40.10 226 341 5.2E-16 T 28-03-2018 IPR013783 Immunoglobulin-like fold AM393_RS23410 cfea99075846b64e617250b4d12bc74b 1035 SUPERFAMILY SSF49785 21 225 5.1E-65 T 28-03-2018 IPR008979 Galactose-binding domain-like AM393_RS23410 cfea99075846b64e617250b4d12bc74b 1035 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 343 636 1.9E-112 T 28-03-2018 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 AM393_RS23410 cfea99075846b64e617250b4d12bc74b 1035 SUPERFAMILY SSF51445 343 632 6.43E-99 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily AM393_RS23410 cfea99075846b64e617250b4d12bc74b 1035 SUPERFAMILY SSF49303 629 738 1.8E-27 T 28-03-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 AM393_RS23410 cfea99075846b64e617250b4d12bc74b 1035 Pfam PF16353 Domain of unknown function(DUF4981) 647 735 1.2E-16 T 28-03-2018 IPR032312 Beta-galactosidase, domain 4 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AM393_RS23410 cfea99075846b64e617250b4d12bc74b 1035 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 59 225 2.4E-57 T 28-03-2018 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AM393_RS23410 cfea99075846b64e617250b4d12bc74b 1035 ProSitePatterns PS00608 Glycosyl hydrolases family 2 acid/base catalyst. 455 469 - T 28-03-2018 IPR023232 Glycoside hydrolase, family 2, active site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-6798695 AM393_RS23410 cfea99075846b64e617250b4d12bc74b 1035 Pfam PF00703 Glycosyl hydrolases family 2 230 341 5.4E-10 T 28-03-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 AM393_RS23410 cfea99075846b64e617250b4d12bc74b 1035 Pfam PF02929 Beta galactosidase small chain 765 1031 1.2E-57 T 28-03-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AM393_RS23410 cfea99075846b64e617250b4d12bc74b 1035 SUPERFAMILY SSF49303 228 341 2.65E-20 T 28-03-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 AM393_RS23410 cfea99075846b64e617250b4d12bc74b 1035 Gene3D G3DSA:3.20.20.80 342 632 6.1E-84 T 28-03-2018 AM393_RS23410 cfea99075846b64e617250b4d12bc74b 1035 Gene3D G3DSA:2.70.98.10 743 1035 3.8E-76 T 28-03-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 AM393_RS23410 cfea99075846b64e617250b4d12bc74b 1035 ProSitePatterns PS00719 Glycosyl hydrolases family 2 signature 1. 393 418 - T 28-03-2018 IPR023230 Glycoside hydrolase, family 2, conserved site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-6798695 AM393_RS23410 cfea99075846b64e617250b4d12bc74b 1035 Gene3D G3DSA:2.60.40.10 634 740 4.5E-21 T 28-03-2018 IPR013783 Immunoglobulin-like fold AM393_RS23410 cfea99075846b64e617250b4d12bc74b 1035 Hamap MF_01687 Beta-galactosidase [lacZ]. 12 1035 17.318 T 28-03-2018 IPR023933 Glycoside hydrolase, family 2, beta-galactosidase GO:0016798 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AM393_RS10110 a2beaa8dacb07f826917cda4327274c8 100 PIRSF PIRSF000699 1 100 2.9E-32 T 28-03-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 AM393_RS10110 a2beaa8dacb07f826917cda4327274c8 100 SUPERFAMILY SSF46973 2 100 1.96E-32 T 28-03-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 AM393_RS10110 a2beaa8dacb07f826917cda4327274c8 100 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 7 99 1.9E-32 T 28-03-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 AM393_RS10110 a2beaa8dacb07f826917cda4327274c8 100 Gene3D G3DSA:1.20.58.80 2 100 1.7E-34 T 28-03-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 AM393_RS05410 2e07e4b51eb2af8d8093de5ba5eecc3e 291 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 13 280 6.7E-76 T 28-03-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 AM393_RS05410 2e07e4b51eb2af8d8093de5ba5eecc3e 291 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 10 285 20.263 T 28-03-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 AM393_RS05410 2e07e4b51eb2af8d8093de5ba5eecc3e 291 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 1 289 1.5E-107 T 28-03-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 AM393_RS05410 2e07e4b51eb2af8d8093de5ba5eecc3e 291 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 142 154 - T 28-03-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 AM393_RS01135 fb1c5d63b348aa74023824db2c90fbfa 140 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 97 132 5.3E-9 T 28-03-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 AM393_RS01135 fb1c5d63b348aa74023824db2c90fbfa 140 SUPERFAMILY SSF57716 99 137 1.4E-6 T 28-03-2018 AM393_RS01135 fb1c5d63b348aa74023824db2c90fbfa 140 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 21 129 8.6E-38 T 28-03-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 AM393_RS01135 fb1c5d63b348aa74023824db2c90fbfa 140 SUPERFAMILY SSF109635 9 98 2.22E-20 T 28-03-2018 AM393_RS21580 0ea5116074d527cdadeb319c65cdcc1d 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 3.6E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS21580 0ea5116074d527cdadeb319c65cdcc1d 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 3.6E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS21580 0ea5116074d527cdadeb319c65cdcc1d 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 3.6E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS21580 0ea5116074d527cdadeb319c65cdcc1d 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 3.6E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS21580 0ea5116074d527cdadeb319c65cdcc1d 235 SUPERFAMILY SSF51735 6 235 1.14E-52 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS21580 0ea5116074d527cdadeb319c65cdcc1d 235 Pfam PF00106 short chain dehydrogenase 7 195 1.2E-21 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS21580 0ea5116074d527cdadeb319c65cdcc1d 235 Gene3D G3DSA:3.40.50.720 1 235 1.1E-37 T 28-03-2018 AM393_RS20085 67b54a10130947630946603c9441a4fb 466 SUPERFAMILY SSF50249 16 101 3.21E-17 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM393_RS20085 67b54a10130947630946603c9441a4fb 466 Pfam PF01336 OB-fold nucleic acid binding domain 20 99 3.7E-12 T 28-03-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 AM393_RS20085 67b54a10130947630946603c9441a4fb 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 208 220 3.8E-14 T 28-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM393_RS20085 67b54a10130947630946603c9441a4fb 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 381 397 3.8E-14 T 28-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM393_RS20085 67b54a10130947630946603c9441a4fb 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 224 237 3.8E-14 T 28-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM393_RS20085 67b54a10130947630946603c9441a4fb 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 421 435 3.8E-14 T 28-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM393_RS20085 67b54a10130947630946603c9441a4fb 466 Gene3D G3DSA:2.40.50.140 8 106 2.8E-17 T 28-03-2018 AM393_RS20085 67b54a10130947630946603c9441a4fb 466 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 5 466 4.3E-211 T 28-03-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 AM393_RS20085 67b54a10130947630946603c9441a4fb 466 SUPERFAMILY SSF55681 99 465 9.36E-96 T 28-03-2018 AM393_RS20085 67b54a10130947630946603c9441a4fb 466 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 6 466 46.166 T 28-03-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 AM393_RS20085 67b54a10130947630946603c9441a4fb 466 Pfam PF00152 tRNA synthetases class II (D, K and N) 119 460 5.7E-82 T 28-03-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM393_RS20085 67b54a10130947630946603c9441a4fb 466 Gene3D G3DSA:3.30.930.10 128 462 1.3E-94 T 28-03-2018 AM393_RS07575 801c6c31915f9ef678c45a04df61b060 477 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 360 374 3.9E-39 T 28-03-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AM393_RS07575 801c6c31915f9ef678c45a04df61b060 477 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 424 437 3.9E-39 T 28-03-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AM393_RS07575 801c6c31915f9ef678c45a04df61b060 477 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 58 77 3.9E-39 T 28-03-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AM393_RS07575 801c6c31915f9ef678c45a04df61b060 477 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 345 359 3.9E-39 T 28-03-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AM393_RS07575 801c6c31915f9ef678c45a04df61b060 477 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 286 308 3.9E-39 T 28-03-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AM393_RS07575 801c6c31915f9ef678c45a04df61b060 477 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 20 468 2.5E-170 T 28-03-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AM393_RS07575 801c6c31915f9ef678c45a04df61b060 477 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 47 447 8.7E-178 T 28-03-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AM393_RS07575 801c6c31915f9ef678c45a04df61b060 477 Gene3D G3DSA:3.40.710.10 20 477 1.5E-38 T 28-03-2018 AM393_RS07575 801c6c31915f9ef678c45a04df61b060 477 SUPERFAMILY SSF56601 23 473 2.95E-99 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AM393_RS10025 9ca0e73ea07dbb72f5714b75c2148016 1035 Gene3D G3DSA:3.30.70.1440 670 766 6.6E-18 T 28-03-2018 AM393_RS10025 9ca0e73ea07dbb72f5714b75c2148016 1035 SUPERFAMILY SSF82693 275 331 5.75E-22 T 28-03-2018 AM393_RS10025 9ca0e73ea07dbb72f5714b75c2148016 1035 SUPERFAMILY SSF82693 137 183 5.75E-22 T 28-03-2018 AM393_RS10025 9ca0e73ea07dbb72f5714b75c2148016 1035 PRINTS PR00702 Acriflavin resistance protein family signature 471 494 5.7E-106 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS10025 9ca0e73ea07dbb72f5714b75c2148016 1035 PRINTS PR00702 Acriflavin resistance protein family signature 550 567 5.7E-106 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS10025 9ca0e73ea07dbb72f5714b75c2148016 1035 PRINTS PR00702 Acriflavin resistance protein family signature 37 55 5.7E-106 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS10025 9ca0e73ea07dbb72f5714b75c2148016 1035 PRINTS PR00702 Acriflavin resistance protein family signature 364 385 5.7E-106 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS10025 9ca0e73ea07dbb72f5714b75c2148016 1035 PRINTS PR00702 Acriflavin resistance protein family signature 392 416 5.7E-106 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS10025 9ca0e73ea07dbb72f5714b75c2148016 1035 PRINTS PR00702 Acriflavin resistance protein family signature 619 633 5.7E-106 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS10025 9ca0e73ea07dbb72f5714b75c2148016 1035 PRINTS PR00702 Acriflavin resistance protein family signature 337 360 5.7E-106 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS10025 9ca0e73ea07dbb72f5714b75c2148016 1035 PRINTS PR00702 Acriflavin resistance protein family signature 446 469 5.7E-106 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS10025 9ca0e73ea07dbb72f5714b75c2148016 1035 PRINTS PR00702 Acriflavin resistance protein family signature 9 33 5.7E-106 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS10025 9ca0e73ea07dbb72f5714b75c2148016 1035 Pfam PF00873 AcrB/AcrD/AcrF family 2 1024 0.0 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS10025 9ca0e73ea07dbb72f5714b75c2148016 1035 Gene3D G3DSA:3.30.2090.10 181 274 1.8E-21 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM393_RS10025 9ca0e73ea07dbb72f5714b75c2148016 1035 SUPERFAMILY SSF82714 183 273 5.75E-23 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM393_RS10025 9ca0e73ea07dbb72f5714b75c2148016 1035 Gene3D G3DSA:1.20.1640.10 810 1027 1.4E-32 T 28-03-2018 AM393_RS10025 9ca0e73ea07dbb72f5714b75c2148016 1035 Gene3D G3DSA:1.20.1640.10 275 500 2.9E-45 T 28-03-2018 AM393_RS10025 9ca0e73ea07dbb72f5714b75c2148016 1035 Gene3D G3DSA:3.30.70.1430 565 666 2.7E-18 T 28-03-2018 AM393_RS10025 9ca0e73ea07dbb72f5714b75c2148016 1035 SUPERFAMILY SSF82693 670 719 2.88E-22 T 28-03-2018 AM393_RS10025 9ca0e73ea07dbb72f5714b75c2148016 1035 SUPERFAMILY SSF82693 806 854 2.88E-22 T 28-03-2018 AM393_RS10025 9ca0e73ea07dbb72f5714b75c2148016 1035 SUPERFAMILY SSF82866 297 497 2.22E-48 T 28-03-2018 AM393_RS10025 9ca0e73ea07dbb72f5714b75c2148016 1035 SUPERFAMILY SSF82693 39 132 1.31E-27 T 28-03-2018 AM393_RS10025 9ca0e73ea07dbb72f5714b75c2148016 1035 SUPERFAMILY SSF82866 835 1024 9.02E-40 T 28-03-2018 AM393_RS10025 9ca0e73ea07dbb72f5714b75c2148016 1035 SUPERFAMILY SSF82693 563 669 8.89E-28 T 28-03-2018 AM393_RS10025 9ca0e73ea07dbb72f5714b75c2148016 1035 SUPERFAMILY SSF82714 720 807 6.67E-21 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM393_RS10025 9ca0e73ea07dbb72f5714b75c2148016 1035 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 2 1033 0.0 T 28-03-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 AM393_RS10025 9ca0e73ea07dbb72f5714b75c2148016 1035 Gene3D G3DSA:3.30.70.1430 39 141 2.3E-30 T 28-03-2018 AM393_RS25050 85e3e788ddc0265b5893069dab2938bf 373 Gene3D G3DSA:3.40.630.10 2 216 1.3E-48 T 28-03-2018 AM393_RS25050 85e3e788ddc0265b5893069dab2938bf 373 Gene3D G3DSA:3.40.630.10 239 373 1.1E-17 T 28-03-2018 AM393_RS25050 85e3e788ddc0265b5893069dab2938bf 373 Pfam PF01546 Peptidase family M20/M25/M40 63 367 6.5E-30 T 28-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 AM393_RS25050 85e3e788ddc0265b5893069dab2938bf 373 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 7 356 5.7E-112 T 28-03-2018 IPR017439 Amidohydrolase GO:0016787 AM393_RS25050 85e3e788ddc0265b5893069dab2938bf 373 PIRSF PIRSF005962 1 372 3.4E-116 T 28-03-2018 IPR017439 Amidohydrolase GO:0016787 AM393_RS25050 85e3e788ddc0265b5893069dab2938bf 373 SUPERFAMILY SSF55031 174 279 1.31E-29 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain AM393_RS25050 85e3e788ddc0265b5893069dab2938bf 373 Pfam PF07687 Peptidase dimerisation domain 175 266 3.4E-11 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain AM393_RS25050 85e3e788ddc0265b5893069dab2938bf 373 SUPERFAMILY SSF53187 3 187 3.04E-81 T 28-03-2018 AM393_RS25050 85e3e788ddc0265b5893069dab2938bf 373 SUPERFAMILY SSF53187 288 370 3.04E-81 T 28-03-2018 AM393_RS24295 ae9adeb4e6d5184cba086894e32aa2f9 219 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 47 213 1.8E-14 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS24295 ae9adeb4e6d5184cba086894e32aa2f9 219 SUPERFAMILY SSF161098 14 204 5.49E-37 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS24295 ae9adeb4e6d5184cba086894e32aa2f9 219 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 13 106 6.5E-24 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AM393_RS24295 ae9adeb4e6d5184cba086894e32aa2f9 219 Gene3D G3DSA:1.10.3720.10 2 219 3.7E-35 T 28-03-2018 AM393_RS11820 39df377747fe6caebab4804af00149f1 464 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 350 455 6.2E-23 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS11820 39df377747fe6caebab4804af00149f1 464 Gene3D G3DSA:3.30.450.20 28 165 3.2E-9 T 28-03-2018 AM393_RS11820 39df377747fe6caebab4804af00149f1 464 SMART SM00387 349 456 2.8E-34 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS11820 39df377747fe6caebab4804af00149f1 464 Pfam PF00512 His Kinase A (phospho-acceptor) domain 241 303 3.4E-13 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM393_RS11820 39df377747fe6caebab4804af00149f1 464 Gene3D G3DSA:1.10.287.130 226 303 5.0E-14 T 28-03-2018 AM393_RS11820 39df377747fe6caebab4804af00149f1 464 SMART SM00388 241 307 3.8E-15 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM393_RS11820 39df377747fe6caebab4804af00149f1 464 SUPERFAMILY SSF55874 297 454 3.54E-42 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS11820 39df377747fe6caebab4804af00149f1 464 Gene3D G3DSA:3.30.565.10 307 464 2.8E-46 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS11820 39df377747fe6caebab4804af00149f1 464 SUPERFAMILY SSF47384 235 304 3.92E-13 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM393_RS11820 39df377747fe6caebab4804af00149f1 464 SUPERFAMILY SSF103190 35 165 2.12E-18 T 28-03-2018 IPR029151 Periplasmic sensor domain-like AM393_RS11820 39df377747fe6caebab4804af00149f1 464 PRINTS PR00344 Bacterial sensor protein C-terminal signature 405 415 3.9E-19 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM393_RS11820 39df377747fe6caebab4804af00149f1 464 PRINTS PR00344 Bacterial sensor protein C-terminal signature 416 434 3.9E-19 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM393_RS11820 39df377747fe6caebab4804af00149f1 464 PRINTS PR00344 Bacterial sensor protein C-terminal signature 440 453 3.9E-19 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM393_RS11820 39df377747fe6caebab4804af00149f1 464 PRINTS PR00344 Bacterial sensor protein C-terminal signature 387 401 3.9E-19 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM393_RS11820 39df377747fe6caebab4804af00149f1 464 Pfam PF17203 Single cache domain 3 44 131 7.7E-9 T 28-03-2018 IPR033463 Single cache domain 3 AM393_RS00160 dbfcda8c60038bca176f356d19dba63d 291 Pfam PF00005 ABC transporter 21 211 3.5E-27 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS00160 dbfcda8c60038bca176f356d19dba63d 291 Gene3D G3DSA:3.40.50.300 1 291 1.3E-55 T 28-03-2018 AM393_RS00160 dbfcda8c60038bca176f356d19dba63d 291 SUPERFAMILY SSF52540 4 66 5.74E-57 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS00160 dbfcda8c60038bca176f356d19dba63d 291 SUPERFAMILY SSF52540 99 283 5.74E-57 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS00160 dbfcda8c60038bca176f356d19dba63d 291 ProSitePatterns PS00211 ABC transporters family signature. 184 198 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS00160 dbfcda8c60038bca176f356d19dba63d 291 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 262 283 6.9E-7 T 28-03-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal AM393_RS00160 dbfcda8c60038bca176f356d19dba63d 291 SMART SM00382 30 261 1.0E-10 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS18360 64d656356feb4f454a0ed758baacd79c 160 Pfam PF07295 Zinc-ribbon containing domain 14 157 1.1E-55 T 28-03-2018 IPR009912 Zinc-ribbon containing domain AM393_RS18360 64d656356feb4f454a0ed758baacd79c 160 Gene3D G3DSA:2.20.25.10 140 157 0.014 T 28-03-2018 AM393_RS28635 aaee1afe763500a7660872471f64044c 583 TIGRFAM TIGR00345 GET3_arsA_TRC40: transport-energizing ATPase, TRC40/GET3/ArsA family 12 292 7.5E-97 T 28-03-2018 IPR016300 Arsenical pump ATPase, ArsA/GET3 GO:0005524|GO:0016887 Reactome: R-HSA-381038 AM393_RS28635 aaee1afe763500a7660872471f64044c 583 SUPERFAMILY SSF52540 316 577 8.69E-45 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS28635 aaee1afe763500a7660872471f64044c 583 Gene3D G3DSA:3.40.50.300 1 295 2.0E-62 T 28-03-2018 AM393_RS28635 aaee1afe763500a7660872471f64044c 583 Pfam PF02374 Anion-transporting ATPase 482 581 3.9E-6 T 28-03-2018 IPR025723 Anion-transporting ATPase-like domain Reactome: R-HSA-381038 AM393_RS28635 aaee1afe763500a7660872471f64044c 583 Pfam PF02374 Anion-transporting ATPase 329 475 3.1E-31 T 28-03-2018 IPR025723 Anion-transporting ATPase-like domain Reactome: R-HSA-381038 AM393_RS28635 aaee1afe763500a7660872471f64044c 583 Pfam PF02374 Anion-transporting ATPase 10 292 1.5E-88 T 28-03-2018 IPR025723 Anion-transporting ATPase-like domain Reactome: R-HSA-381038 AM393_RS28635 aaee1afe763500a7660872471f64044c 583 SUPERFAMILY SSF52540 9 263 5.78E-52 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS28635 aaee1afe763500a7660872471f64044c 583 TIGRFAM TIGR04291 arsen_driv_ArsA: arsenical pump-driving ATPase 7 569 6.4E-287 T 28-03-2018 IPR027541 Arsenical pump-driving ATPase GO:0005524|GO:0015446|GO:0016887|GO:0071722 MetaCyc: PWY-4621 AM393_RS28635 aaee1afe763500a7660872471f64044c 583 PIRSF PIRSF001327 1 583 9.5E-267 T 28-03-2018 IPR027541 Arsenical pump-driving ATPase GO:0005524|GO:0015446|GO:0016887|GO:0071722 MetaCyc: PWY-4621 AM393_RS28635 aaee1afe763500a7660872471f64044c 583 Gene3D G3DSA:3.40.50.300 310 582 3.2E-46 T 28-03-2018 AM393_RS08835 74e32e8bf496283a1025ee7529e70dd7 438 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 140 157 - T 28-03-2018 IPR006061 Solute-binding family 1, conserved site GO:0006810 AM393_RS08835 74e32e8bf496283a1025ee7529e70dd7 438 Gene3D G3DSA:3.40.190.10 253 383 3.3E-14 T 28-03-2018 AM393_RS08835 74e32e8bf496283a1025ee7529e70dd7 438 SUPERFAMILY SSF53850 25 425 1.09E-77 T 28-03-2018 AM393_RS08835 74e32e8bf496283a1025ee7529e70dd7 438 Pfam PF13416 Bacterial extracellular solute-binding protein 44 367 2.5E-45 T 28-03-2018 AM393_RS08835 74e32e8bf496283a1025ee7529e70dd7 438 Gene3D G3DSA:3.40.190.10 24 215 3.0E-30 T 28-03-2018 AM393_RS12620 cda56c73bc1b355c87d5529f83571277 707 SUPERFAMILY SSF90123 161 475 3.01E-59 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AM393_RS12620 cda56c73bc1b355c87d5529f83571277 707 Gene3D G3DSA:1.20.1560.10 154 479 9.7E-42 T 28-03-2018 AM393_RS12620 cda56c73bc1b355c87d5529f83571277 707 Gene3D G3DSA:3.40.50.300 480 705 2.9E-56 T 28-03-2018 AM393_RS12620 cda56c73bc1b355c87d5529f83571277 707 ProSitePatterns PS00211 ABC transporters family signature. 630 644 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS12620 cda56c73bc1b355c87d5529f83571277 707 Gene3D G3DSA:3.90.70.10 23 153 5.5E-39 T 28-03-2018 AM393_RS12620 cda56c73bc1b355c87d5529f83571277 707 Pfam PF00005 ABC transporter 510 658 1.2E-29 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS12620 cda56c73bc1b355c87d5529f83571277 707 Pfam PF03412 Peptidase C39 family 21 149 4.3E-35 T 28-03-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 AM393_RS12620 cda56c73bc1b355c87d5529f83571277 707 Pfam PF00664 ABC transporter transmembrane region 177 444 7.0E-44 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AM393_RS12620 cda56c73bc1b355c87d5529f83571277 707 SMART SM00382 518 702 6.4E-20 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS12620 cda56c73bc1b355c87d5529f83571277 707 SUPERFAMILY SSF52540 488 700 2.06E-63 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS10845 af34cbf6b17c7d12ddf709fc5a19d73f 182 Pfam PF01381 Helix-turn-helix 16 64 1.2E-12 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM393_RS10845 af34cbf6b17c7d12ddf709fc5a19d73f 182 Pfam PF07883 Cupin domain 112 169 1.3E-7 T 28-03-2018 IPR013096 Cupin 2, conserved barrel AM393_RS10845 af34cbf6b17c7d12ddf709fc5a19d73f 182 SUPERFAMILY SSF51182 59 178 5.27E-20 T 28-03-2018 IPR011051 RmlC-like cupin domain AM393_RS10845 af34cbf6b17c7d12ddf709fc5a19d73f 182 SMART SM00530 11 66 5.4E-12 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM393_RS10845 af34cbf6b17c7d12ddf709fc5a19d73f 182 Gene3D G3DSA:2.60.120.10 72 182 9.6E-15 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AM393_RS10845 af34cbf6b17c7d12ddf709fc5a19d73f 182 SUPERFAMILY SSF47413 5 70 2.56E-15 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM393_RS10845 af34cbf6b17c7d12ddf709fc5a19d73f 182 Gene3D G3DSA:1.10.260.40 3 71 3.0E-16 T 28-03-2018 AM393_RS11495 f73fde6baa18a4ebd360856bd2f3687e 317 SUPERFAMILY SSF53850 87 291 8.01E-42 T 28-03-2018 AM393_RS11495 f73fde6baa18a4ebd360856bd2f3687e 317 Gene3D G3DSA:1.10.10.10 1 84 8.8E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS11495 f73fde6baa18a4ebd360856bd2f3687e 317 Pfam PF03466 LysR substrate binding domain 86 288 5.3E-44 T 28-03-2018 IPR005119 LysR, substrate-binding AM393_RS11495 f73fde6baa18a4ebd360856bd2f3687e 317 Gene3D G3DSA:3.40.190.10 86 174 7.5E-20 T 28-03-2018 AM393_RS11495 f73fde6baa18a4ebd360856bd2f3687e 317 SUPERFAMILY SSF46785 2 109 1.69E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS11495 f73fde6baa18a4ebd360856bd2f3687e 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 5.6E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS11495 f73fde6baa18a4ebd360856bd2f3687e 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 5.6E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS11495 f73fde6baa18a4ebd360856bd2f3687e 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 5.6E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS11495 f73fde6baa18a4ebd360856bd2f3687e 317 Gene3D G3DSA:3.40.190.10 175 262 3.2E-17 T 28-03-2018 AM393_RS11495 f73fde6baa18a4ebd360856bd2f3687e 317 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 6.5E-16 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS25025 0a9a478b6fc21c80c189bef9e539b40c 259 SMART SM00382 33 230 1.4E-19 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS25025 0a9a478b6fc21c80c189bef9e539b40c 259 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS25025 0a9a478b6fc21c80c189bef9e539b40c 259 SUPERFAMILY SSF52540 9 252 2.37E-76 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS25025 0a9a478b6fc21c80c189bef9e539b40c 259 Pfam PF00005 ABC transporter 24 182 5.8E-35 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS25025 0a9a478b6fc21c80c189bef9e539b40c 259 Gene3D G3DSA:3.40.50.300 6 257 2.3E-78 T 28-03-2018 AM393_RS25025 0a9a478b6fc21c80c189bef9e539b40c 259 PIRSF PIRSF039085 5 258 5.0E-106 T 28-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 AM393_RS10235 3c8e70a58232af915b997a57c0103994 307 Gene3D G3DSA:1.10.10.10 4 100 1.2E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS10235 3c8e70a58232af915b997a57c0103994 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 18 76 2.1E-19 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS10235 3c8e70a58232af915b997a57c0103994 307 Pfam PF03466 LysR substrate binding domain 99 304 1.0E-28 T 28-03-2018 IPR005119 LysR, substrate-binding AM393_RS10235 3c8e70a58232af915b997a57c0103994 307 Gene3D G3DSA:3.40.190.10 185 277 4.6E-19 T 28-03-2018 AM393_RS10235 3c8e70a58232af915b997a57c0103994 307 TIGRFAM TIGR02036 dsdC: D-serine deaminase transcriptional activator 10 305 4.4E-165 T 28-03-2018 IPR011781 D-serine deaminase transcriptional activator AM393_RS10235 3c8e70a58232af915b997a57c0103994 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 53 4.1E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS10235 3c8e70a58232af915b997a57c0103994 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 43 4.1E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS10235 3c8e70a58232af915b997a57c0103994 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 53 64 4.1E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS10235 3c8e70a58232af915b997a57c0103994 307 SUPERFAMILY SSF46785 16 123 5.45E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS10235 3c8e70a58232af915b997a57c0103994 307 Gene3D G3DSA:3.40.190.10 103 184 1.1E-11 T 28-03-2018 AM393_RS10235 3c8e70a58232af915b997a57c0103994 307 SUPERFAMILY SSF53850 99 306 2.9E-31 T 28-03-2018 AM393_RS07730 212184fb82eca767a279030e1d3de08e 427 SUPERFAMILY SSF103473 4 418 3.01E-87 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS07730 212184fb82eca767a279030e1d3de08e 427 Pfam PF07690 Major Facilitator Superfamily 13 378 2.0E-56 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS07730 212184fb82eca767a279030e1d3de08e 427 Gene3D G3DSA:1.20.1250.20 1 201 2.8E-40 T 28-03-2018 AM393_RS07730 212184fb82eca767a279030e1d3de08e 427 PIRSF PIRSF002808 1 427 5.3E-49 T 28-03-2018 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 AM393_RS07730 212184fb82eca767a279030e1d3de08e 427 Gene3D G3DSA:1.20.1250.20 216 427 7.2E-33 T 28-03-2018 AM393_RS10240 464bed3847c210d32e83d1b915aad208 445 Pfam PF02447 GntP family permease 7 444 1.2E-158 T 28-03-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 AM393_RS10240 464bed3847c210d32e83d1b915aad208 445 PIRSF PIRSF002746 2 445 2.1E-142 T 28-03-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 AM393_RS10240 464bed3847c210d32e83d1b915aad208 445 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 5 445 1.3E-166 T 28-03-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 AM393_RS01140 76ca763a4f46a90a671c0e0d20ccbfb5 399 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 5 203 5.4E-25 T 28-03-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain AM393_RS01140 76ca763a4f46a90a671c0e0d20ccbfb5 399 SMART SM00833 252 372 4.0E-33 T 28-03-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AM393_RS01140 76ca763a4f46a90a671c0e0d20ccbfb5 399 Gene3D G3DSA:3.30.1220.10 234 373 7.1E-21 T 28-03-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AM393_RS01140 76ca763a4f46a90a671c0e0d20ccbfb5 399 Gene3D G3DSA:3.40.50.300 1 223 1.2E-26 T 28-03-2018 AM393_RS01140 76ca763a4f46a90a671c0e0d20ccbfb5 399 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 256 372 5.1E-19 T 28-03-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AM393_RS01140 76ca763a4f46a90a671c0e0d20ccbfb5 399 SUPERFAMILY SSF52540 2 239 1.47E-19 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS01140 76ca763a4f46a90a671c0e0d20ccbfb5 399 SUPERFAMILY SSF90002 255 316 6.67E-11 T 28-03-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AM393_RS01140 76ca763a4f46a90a671c0e0d20ccbfb5 399 SUPERFAMILY SSF90002 346 372 6.67E-11 T 28-03-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AM393_RS18245 8a115cd24dfd0e59c738e60b480da736 265 ProSitePatterns PS00531 Ribonuclease T2 family histidine active site 2. 145 156 - T 28-03-2018 IPR033130 Ribonuclease T2, His active site 2 Reactome: R-HSA-6798695 AM393_RS18245 8a115cd24dfd0e59c738e60b480da736 265 SUPERFAMILY SSF55895 30 259 2.49E-26 T 28-03-2018 IPR001568 Ribonuclease T2-like GO:0003723|GO:0033897 Reactome: R-HSA-6798695 AM393_RS18245 8a115cd24dfd0e59c738e60b480da736 265 Pfam PF00445 Ribonuclease T2 family 35 233 1.7E-12 T 28-03-2018 IPR001568 Ribonuclease T2-like GO:0003723|GO:0033897 Reactome: R-HSA-6798695 AM393_RS18245 8a115cd24dfd0e59c738e60b480da736 265 Gene3D G3DSA:3.90.730.10 27 265 5.5E-33 T 28-03-2018 IPR001568 Ribonuclease T2-like GO:0003723|GO:0033897 Reactome: R-HSA-6798695 AM393_RS18245 8a115cd24dfd0e59c738e60b480da736 265 ProSitePatterns PS00530 Ribonuclease T2 family histidine active site 1. 72 79 - T 28-03-2018 IPR018188 Ribonuclease T2, His active site 1 GO:0003723|GO:0033897 Reactome: R-HSA-6798695 AM393_RS14305 4fa25f3a1513f498edc19694a394f99a 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 226 2.6E-23 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM393_RS14305 4fa25f3a1513f498edc19694a394f99a 229 SMART SM00448 4 115 1.6E-40 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM393_RS14305 4fa25f3a1513f498edc19694a394f99a 229 Gene3D G3DSA:1.10.10.10 123 228 1.8E-26 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS14305 4fa25f3a1513f498edc19694a394f99a 229 SMART SM00862 150 226 8.5E-23 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM393_RS14305 4fa25f3a1513f498edc19694a394f99a 229 Pfam PF00072 Response regulator receiver domain 6 115 6.0E-26 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM393_RS14305 4fa25f3a1513f498edc19694a394f99a 229 SUPERFAMILY SSF46894 127 226 3.97E-24 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM393_RS14305 4fa25f3a1513f498edc19694a394f99a 229 Gene3D G3DSA:3.40.50.2300 1 122 6.4E-34 T 28-03-2018 AM393_RS14305 4fa25f3a1513f498edc19694a394f99a 229 SUPERFAMILY SSF52172 2 131 2.7E-39 T 28-03-2018 IPR011006 CheY-like superfamily AM393_RS02010 6f95df4bf674f70cdfa430d9fb142b4f 153 Gene3D G3DSA:3.40.630.30 8 88 9.8E-18 T 28-03-2018 AM393_RS02010 6f95df4bf674f70cdfa430d9fb142b4f 153 Gene3D G3DSA:3.40.630.30 89 152 2.9E-12 T 28-03-2018 AM393_RS02010 6f95df4bf674f70cdfa430d9fb142b4f 153 Pfam PF13508 Acetyltransferase (GNAT) domain 57 133 4.0E-16 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AM393_RS02010 6f95df4bf674f70cdfa430d9fb142b4f 153 SUPERFAMILY SSF55729 11 137 8.1E-28 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM393_RS00415 a4efa2ff697b7c08663736dd40d0f97c 283 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 12 281 1.1E-112 T 28-03-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 AM393_RS00415 a4efa2ff697b7c08663736dd40d0f97c 283 TIGRFAM TIGR00828 EIID-AGA: PTS system, mannose/fructose/sorbose family, IID component 11 281 4.6E-148 T 28-03-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 AM393_RS09430 5aa0cfa21841890005efcdf2ad0cbe69 484 PIRSF PIRSF000538 1 484 7.4E-135 T 28-03-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AM393_RS09430 5aa0cfa21841890005efcdf2ad0cbe69 484 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 126 138 - T 28-03-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AM393_RS09430 5aa0cfa21841890005efcdf2ad0cbe69 484 Gene3D G3DSA:3.30.420.40 238 483 9.1E-59 T 28-03-2018 AM393_RS09430 5aa0cfa21841890005efcdf2ad0cbe69 484 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 347 367 - T 28-03-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AM393_RS09430 5aa0cfa21841890005efcdf2ad0cbe69 484 Gene3D G3DSA:3.30.420.40 1 237 2.3E-76 T 28-03-2018 AM393_RS09430 5aa0cfa21841890005efcdf2ad0cbe69 484 SUPERFAMILY SSF53067 243 483 2.36E-63 T 28-03-2018 AM393_RS09430 5aa0cfa21841890005efcdf2ad0cbe69 484 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 1 240 6.5E-82 T 28-03-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 AM393_RS09430 5aa0cfa21841890005efcdf2ad0cbe69 484 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 249 435 2.9E-33 T 28-03-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 AM393_RS09430 5aa0cfa21841890005efcdf2ad0cbe69 484 TIGRFAM TIGR01312 XylB: xylulokinase 3 477 1.8E-185 T 28-03-2018 IPR006000 Xylulokinase GO:0004856|GO:0005997 KEGG: 00040+2.7.1.17 AM393_RS09430 5aa0cfa21841890005efcdf2ad0cbe69 484 SUPERFAMILY SSF53067 2 242 2.29E-72 T 28-03-2018 AM393_RS14755 c432f0b61e23bf51ee52c721bb14ef2f 466 Gene3D G3DSA:3.40.1060.10 153 288 2.6E-43 T 28-03-2018 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33 AM393_RS14755 c432f0b61e23bf51ee52c721bb14ef2f 466 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 1 465 3.5E-280 T 28-03-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 AM393_RS14755 c432f0b61e23bf51ee52c721bb14ef2f 466 ProSitePatterns PS00450 Aconitase family signature 1. 339 355 - T 28-03-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 AM393_RS14755 c432f0b61e23bf51ee52c721bb14ef2f 466 ProSitePatterns PS01244 Aconitase family signature 2. 399 412 - T 28-03-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 AM393_RS14755 c432f0b61e23bf51ee52c721bb14ef2f 466 PRINTS PR00415 Aconitase family signature 286 300 3.5E-51 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM393_RS14755 c432f0b61e23bf51ee52c721bb14ef2f 466 PRINTS PR00415 Aconitase family signature 82 95 3.5E-51 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM393_RS14755 c432f0b61e23bf51ee52c721bb14ef2f 466 PRINTS PR00415 Aconitase family signature 119 132 3.5E-51 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM393_RS14755 c432f0b61e23bf51ee52c721bb14ef2f 466 PRINTS PR00415 Aconitase family signature 195 208 3.5E-51 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM393_RS14755 c432f0b61e23bf51ee52c721bb14ef2f 466 PRINTS PR00415 Aconitase family signature 343 354 3.5E-51 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM393_RS14755 c432f0b61e23bf51ee52c721bb14ef2f 466 PRINTS PR00415 Aconitase family signature 399 412 3.5E-51 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM393_RS14755 c432f0b61e23bf51ee52c721bb14ef2f 466 PRINTS PR00415 Aconitase family signature 209 222 3.5E-51 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM393_RS14755 c432f0b61e23bf51ee52c721bb14ef2f 466 PRINTS PR00415 Aconitase family signature 133 148 3.5E-51 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM393_RS14755 c432f0b61e23bf51ee52c721bb14ef2f 466 PRINTS PR00415 Aconitase family signature 108 116 3.5E-51 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM393_RS14755 c432f0b61e23bf51ee52c721bb14ef2f 466 Gene3D G3DSA:3.30.499.10 1 152 2.2E-40 T 28-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 AM393_RS14755 c432f0b61e23bf51ee52c721bb14ef2f 466 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 1 466 62.476 T 28-03-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 AM393_RS14755 c432f0b61e23bf51ee52c721bb14ef2f 466 Pfam PF00330 Aconitase family (aconitate hydratase) 7 457 1.6E-160 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM393_RS14755 c432f0b61e23bf51ee52c721bb14ef2f 466 SUPERFAMILY SSF53732 2 465 1.7E-167 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM393_RS14755 c432f0b61e23bf51ee52c721bb14ef2f 466 Gene3D G3DSA:3.30.499.10 303 466 1.2E-52 T 28-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 AM393_RS19925 5668a184b23fe7ddfcafe130906e4b78 205 SUPERFAMILY SSF54862 3 195 4.4E-68 T 28-03-2018 AM393_RS19925 5668a184b23fe7ddfcafe130906e4b78 205 TIGRFAM TIGR02951 DMSO_dmsB: dimethylsulfoxide reductase, chain B 4 163 1.9E-78 T 28-03-2018 IPR014297 Dimethylsulphoxide reductase, chain B AM393_RS19925 5668a184b23fe7ddfcafe130906e4b78 205 Pfam PF12800 4Fe-4S binding domain 12 25 0.0036 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM393_RS19925 5668a184b23fe7ddfcafe130906e4b78 205 Gene3D G3DSA:3.30.70.20 81 118 1.5E-20 T 28-03-2018 AM393_RS19925 5668a184b23fe7ddfcafe130906e4b78 205 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 99 110 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM393_RS19925 5668a184b23fe7ddfcafe130906e4b78 205 Pfam PF13247 4Fe-4S dicluster domain 59 153 4.4E-28 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM393_RS19925 5668a184b23fe7ddfcafe130906e4b78 205 Gene3D G3DSA:3.30.70.20 119 201 6.4E-17 T 28-03-2018 AM393_RS19925 5668a184b23fe7ddfcafe130906e4b78 205 Gene3D G3DSA:3.30.70.20 3 80 2.8E-18 T 28-03-2018 AM393_RS14180 54fc6e0010437e65306ce3968d51d6bd 225 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 93 195 5.1E-10 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM393_RS14180 54fc6e0010437e65306ce3968d51d6bd 225 Gene3D G3DSA:1.10.150.240 15 86 6.1E-18 T 28-03-2018 IPR023198 Phosphoglycolate phosphatase, domain 2 AM393_RS14180 54fc6e0010437e65306ce3968d51d6bd 225 Pfam PF13419 Haloacid dehalogenase-like hydrolase 81 194 2.4E-20 T 28-03-2018 IPR023214 HAD-like domain AM393_RS14180 54fc6e0010437e65306ce3968d51d6bd 225 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 137 153 2.2E-5 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM393_RS14180 54fc6e0010437e65306ce3968d51d6bd 225 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 106 119 2.2E-5 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM393_RS14180 54fc6e0010437e65306ce3968d51d6bd 225 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 184 197 2.2E-5 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM393_RS14180 54fc6e0010437e65306ce3968d51d6bd 225 Gene3D G3DSA:3.40.50.1000 87 225 5.8E-33 T 28-03-2018 IPR023214 HAD-like domain AM393_RS14180 54fc6e0010437e65306ce3968d51d6bd 225 SUPERFAMILY SSF56784 3 222 1.02E-47 T 28-03-2018 IPR023214 HAD-like domain AM393_RS14180 54fc6e0010437e65306ce3968d51d6bd 225 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 98 189 1.6E-15 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM393_RS14180 54fc6e0010437e65306ce3968d51d6bd 225 TIGRFAM TIGR02254 YjjG/YfnB: noncanonical pyrimidine nucleotidase, YjjG family 4 221 8.2E-73 T 28-03-2018 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB GO:0016787 AM393_RS03240 695002244db8b335e3214e1a44448541 453 Pfam PF06751 Ethanolamine ammonia lyase large subunit (EutB) 12 444 2.2E-204 T 28-03-2018 IPR010628 Ethanolamine ammonia lyase large subunit GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 AM393_RS03240 695002244db8b335e3214e1a44448541 453 PIRSF PIRSF018788 1 453 1.1E-234 T 28-03-2018 IPR010628 Ethanolamine ammonia lyase large subunit GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 AM393_RS03240 695002244db8b335e3214e1a44448541 453 Gene3D G3DSA:2.30.170.30 1 53 2.7E-26 T 28-03-2018 AM393_RS03240 695002244db8b335e3214e1a44448541 453 Gene3D G3DSA:3.20.20.70 143 449 1.5E-153 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM393_RS03240 695002244db8b335e3214e1a44448541 453 Gene3D G3DSA:1.10.220.70 56 140 5.4E-32 T 28-03-2018 AM393_RS25590 e4c2e1d3fa8bb8f2148f084d69b58bff 192 Gene3D G3DSA:3.40.50.450 2 191 7.1E-63 T 28-03-2018 AM393_RS25590 e4c2e1d3fa8bb8f2148f084d69b58bff 192 SUPERFAMILY SSF102405 1 174 2.14E-64 T 28-03-2018 AM393_RS25590 e4c2e1d3fa8bb8f2148f084d69b58bff 192 Pfam PF03641 Possible lysine decarboxylase 46 174 1.8E-43 T 28-03-2018 IPR031100 LOG family AM393_RS25590 e4c2e1d3fa8bb8f2148f084d69b58bff 192 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 2 179 5.1E-63 T 28-03-2018 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG AM393_RS10725 47b1c7e893207afdd000dc34946a79b1 607 SUPERFAMILY SSF52540 3 207 7.3E-59 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS10725 47b1c7e893207afdd000dc34946a79b1 607 Gene3D G3DSA:3.40.50.300 2 67 1.0E-10 T 28-03-2018 AM393_RS10725 47b1c7e893207afdd000dc34946a79b1 607 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 44 59 - T 28-03-2018 IPR031157 Tr-type G domain, conserved site AM393_RS10725 47b1c7e893207afdd000dc34946a79b1 607 SUPERFAMILY SSF54980 302 387 2.77E-15 T 28-03-2018 IPR035647 EF-G domain III/V-like AM393_RS10725 47b1c7e893207afdd000dc34946a79b1 607 Pfam PF03144 Elongation factor Tu domain 2 219 289 4.3E-11 T 28-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AM393_RS10725 47b1c7e893207afdd000dc34946a79b1 607 Gene3D G3DSA:3.30.70.240 401 481 8.1E-19 T 28-03-2018 AM393_RS10725 47b1c7e893207afdd000dc34946a79b1 607 Pfam PF00009 Elongation factor Tu GTP binding domain 4 195 4.7E-57 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM393_RS10725 47b1c7e893207afdd000dc34946a79b1 607 Pfam PF00679 Elongation factor G C-terminus 397 476 1.3E-21 T 28-03-2018 IPR000640 Elongation factor EFG, domain V-like AM393_RS10725 47b1c7e893207afdd000dc34946a79b1 607 PRINTS PR00315 GTP-binding elongation factor signature 87 98 9.6E-15 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM393_RS10725 47b1c7e893207afdd000dc34946a79b1 607 PRINTS PR00315 GTP-binding elongation factor signature 123 132 9.6E-15 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM393_RS10725 47b1c7e893207afdd000dc34946a79b1 607 PRINTS PR00315 GTP-binding elongation factor signature 71 81 9.6E-15 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM393_RS10725 47b1c7e893207afdd000dc34946a79b1 607 PRINTS PR00315 GTP-binding elongation factor signature 51 59 9.6E-15 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM393_RS10725 47b1c7e893207afdd000dc34946a79b1 607 PRINTS PR00315 GTP-binding elongation factor signature 7 20 9.6E-15 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM393_RS10725 47b1c7e893207afdd000dc34946a79b1 607 SUPERFAMILY SSF50447 151 299 3.76E-34 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain AM393_RS10725 47b1c7e893207afdd000dc34946a79b1 607 Gene3D G3DSA:2.40.50.250 483 573 9.5E-38 T 28-03-2018 AM393_RS10725 47b1c7e893207afdd000dc34946a79b1 607 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 5 599 3.7E-293 T 28-03-2018 IPR006298 GTP-binding protein TypA GO:0005525 AM393_RS10725 47b1c7e893207afdd000dc34946a79b1 607 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 134 2.6E-24 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AM393_RS10725 47b1c7e893207afdd000dc34946a79b1 607 Gene3D G3DSA:3.40.50.300 68 187 1.2E-29 T 28-03-2018 AM393_RS10725 47b1c7e893207afdd000dc34946a79b1 607 Gene3D G3DSA:3.30.70.870 302 400 2.9E-32 T 28-03-2018 AM393_RS10725 47b1c7e893207afdd000dc34946a79b1 607 Gene3D G3DSA:2.40.30.10 188 300 1.3E-22 T 28-03-2018 AM393_RS10725 47b1c7e893207afdd000dc34946a79b1 607 SUPERFAMILY SSF54980 398 512 2.59E-26 T 28-03-2018 IPR035647 EF-G domain III/V-like AM393_RS23935 c15afee33b2829546bea6b6efd6e8d91 444 Gene3D G3DSA:1.20.1250.20 21 250 3.8E-22 T 28-03-2018 AM393_RS23935 c15afee33b2829546bea6b6efd6e8d91 444 SUPERFAMILY SSF103473 18 442 1.57E-41 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS23935 c15afee33b2829546bea6b6efd6e8d91 444 Gene3D G3DSA:1.20.1250.20 251 443 1.5E-20 T 28-03-2018 AM393_RS23935 c15afee33b2829546bea6b6efd6e8d91 444 TIGRFAM TIGR00885 fucP: L-fucose:H+ symporter permease 32 437 8.3E-113 T 28-03-2018 IPR005275 L-fucose permease FucP GO:0015150|GO:0015756 AM393_RS23935 c15afee33b2829546bea6b6efd6e8d91 444 Pfam PF07690 Major Facilitator Superfamily 34 403 6.4E-21 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS13940 c610bc0f7a3e2dcf364da63439de83b3 146 SMART SM00347 22 122 1.8E-28 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM393_RS13940 c610bc0f7a3e2dcf364da63439de83b3 146 TIGRFAM TIGR02337 HpaR: homoprotocatechuate degradation operon regulator, HpaR 4 133 2.9E-57 T 28-03-2018 IPR012712 Homoprotocatechuate degradation transcriptional regulator HpaR GO:0003677|GO:0010124|GO:0045892 AM393_RS13940 c610bc0f7a3e2dcf364da63439de83b3 146 ProSitePatterns PS01117 MarR-type HTH domain signature. 61 95 - T 28-03-2018 IPR023187 Transcriptional regulator MarR-type, conserved site AM393_RS13940 c610bc0f7a3e2dcf364da63439de83b3 146 Gene3D G3DSA:1.10.10.10 1 132 6.1E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS13940 c610bc0f7a3e2dcf364da63439de83b3 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 82 98 7.6E-5 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM393_RS13940 c610bc0f7a3e2dcf364da63439de83b3 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 63 78 7.6E-5 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM393_RS13940 c610bc0f7a3e2dcf364da63439de83b3 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 112 132 7.6E-5 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM393_RS13940 c610bc0f7a3e2dcf364da63439de83b3 146 Pfam PF01047 MarR family 29 86 5.0E-15 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM393_RS13940 c610bc0f7a3e2dcf364da63439de83b3 146 SUPERFAMILY SSF46785 3 134 4.47E-29 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS19270 2aa9115837afbf26673c787c5a047933 261 Gene3D G3DSA:3.90.190.10 26 199 1.3E-14 T 28-03-2018 IPR029021 Protein-tyrosine phosphatase-like AM393_RS19270 2aa9115837afbf26673c787c5a047933 261 SUPERFAMILY SSF52799 12 259 8.52E-45 T 28-03-2018 IPR029021 Protein-tyrosine phosphatase-like AM393_RS19270 2aa9115837afbf26673c787c5a047933 261 Pfam PF13350 Tyrosine phosphatase family 13 260 2.0E-57 T 28-03-2018 IPR026893 Tyrosine/serine-protein phosphatase IphP-type AM393_RS02580 7229c7c8fef7b30f858bfcd098e2d010 180 Pfam PF07437 YfaZ precursor 1 180 1.5E-77 T 28-03-2018 IPR009998 YfaZ AM393_RS02580 7229c7c8fef7b30f858bfcd098e2d010 180 Gene3D G3DSA:2.40.160.10 12 180 2.2E-12 T 28-03-2018 AM393_RS02580 7229c7c8fef7b30f858bfcd098e2d010 180 SUPERFAMILY SSF56925 34 175 1.57E-8 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AM393_RS12715 296e41bd28ab2d00d5cb76d2587f2ecf 325 PRINTS PR00982 Lysyl-tRNA synthetase signature 99 116 1.7E-6 T 28-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AM393_RS12715 296e41bd28ab2d00d5cb76d2587f2ecf 325 PRINTS PR00982 Lysyl-tRNA synthetase signature 31 41 1.7E-6 T 28-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AM393_RS12715 296e41bd28ab2d00d5cb76d2587f2ecf 325 SUPERFAMILY SSF55681 14 320 4.98E-85 T 28-03-2018 AM393_RS12715 296e41bd28ab2d00d5cb76d2587f2ecf 325 Pfam PF00152 tRNA synthetases class II (D, K and N) 15 321 3.1E-47 T 28-03-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM393_RS12715 296e41bd28ab2d00d5cb76d2587f2ecf 325 TIGRFAM TIGR00462 genX: EF-P lysine aminoacylase GenX 17 320 6.0E-133 T 28-03-2018 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 AM393_RS12715 296e41bd28ab2d00d5cb76d2587f2ecf 325 Gene3D G3DSA:3.30.930.10 12 324 2.9E-67 T 28-03-2018 AM393_RS12715 296e41bd28ab2d00d5cb76d2587f2ecf 325 Hamap MF_00174 Elongation factor P--(R)-beta-lysine ligase [epmA]. 2 325 57.576 T 28-03-2018 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 AM393_RS14225 806e3f75a59061c98f7e43e968a7a23d 407 Pfam PF01676 Metalloenzyme superfamily 2 398 2.5E-45 T 28-03-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 AM393_RS14225 806e3f75a59061c98f7e43e968a7a23d 407 SUPERFAMILY SSF53649 1 114 3.14E-69 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AM393_RS14225 806e3f75a59061c98f7e43e968a7a23d 407 SUPERFAMILY SSF53649 236 406 3.14E-69 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AM393_RS14225 806e3f75a59061c98f7e43e968a7a23d 407 PIRSF PIRSF001491 1 407 2.1E-165 T 28-03-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 AM393_RS14225 806e3f75a59061c98f7e43e968a7a23d 407 Gene3D G3DSA:3.40.720.10 274 406 5.0E-11 T 28-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AM393_RS14225 806e3f75a59061c98f7e43e968a7a23d 407 Gene3D G3DSA:3.40.720.10 1 128 2.7E-20 T 28-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AM393_RS14225 806e3f75a59061c98f7e43e968a7a23d 407 Hamap MF_00740 Phosphopentomutase [deoB]. 1 407 55.665 T 28-03-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 AM393_RS14225 806e3f75a59061c98f7e43e968a7a23d 407 TIGRFAM TIGR01696 deoB: phosphopentomutase 3 405 7.8E-205 T 28-03-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 AM393_RS14225 806e3f75a59061c98f7e43e968a7a23d 407 SUPERFAMILY SSF143856 117 235 2.88E-50 T 28-03-2018 IPR024052 Phosphopentomutase DeoB cap domain GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 AM393_RS14225 806e3f75a59061c98f7e43e968a7a23d 407 Gene3D G3DSA:3.30.70.1250 129 235 1.0E-51 T 28-03-2018 IPR024052 Phosphopentomutase DeoB cap domain GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 AM393_RS06220 bd4175279cbfabb838c7b5079c2bcca3 239 Pfam PF11101 Protein of unknown function (DUF2884) 24 236 5.3E-41 T 28-03-2018 IPR021307 Protein of unknown function DUF2884 AM393_RS06520 fd6e98e33df23636c321c6d09e8a192f 240 Pfam PF08900 Domain of unknown function (DUF1845) 12 223 2.4E-75 T 28-03-2018 IPR014996 Integrating conjugative element protein, PFL4669 AM393_RS06520 fd6e98e33df23636c321c6d09e8a192f 240 TIGRFAM TIGR03761 ICE_PFL4669: integrating conjugative element protein, PFL_4669 family 13 222 8.7E-75 T 28-03-2018 IPR014996 Integrating conjugative element protein, PFL4669 AM393_RS02575 f8a7c4919349605595235be1d3241a5f 398 Pfam PF00994 Probable molybdopterin binding domain 6 170 4.2E-31 T 28-03-2018 IPR001453 MoaB/Mog domain AM393_RS02575 f8a7c4919349605595235be1d3241a5f 398 SMART SM00852 5 172 1.0E-37 T 28-03-2018 IPR001453 MoaB/Mog domain AM393_RS02575 f8a7c4919349605595235be1d3241a5f 398 SUPERFAMILY SSF142433 250 378 1.57E-5 T 28-03-2018 IPR008136 CinA, C-terminal AM393_RS02575 f8a7c4919349605595235be1d3241a5f 398 SUPERFAMILY SSF53218 2 203 1.83E-37 T 28-03-2018 IPR001453 MoaB/Mog domain AM393_RS02575 f8a7c4919349605595235be1d3241a5f 398 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 3 167 4.5E-34 T 28-03-2018 IPR001453 MoaB/Mog domain AM393_RS02575 f8a7c4919349605595235be1d3241a5f 398 Hamap MF_00226_B Putative competence-damage inducible protein [cinA]. 1 398 121.402 T 28-03-2018 IPR008135 Competence-induced protein CinA AM393_RS02575 f8a7c4919349605595235be1d3241a5f 398 PIRSF PIRSF006728 1 383 1.5E-110 T 28-03-2018 IPR008135 Competence-induced protein CinA AM393_RS02575 f8a7c4919349605595235be1d3241a5f 398 TIGRFAM TIGR00200 cinA_nterm: competence/damage-inducible protein CinA N-terminal domain 1 397 7.4E-161 T 28-03-2018 IPR008135 Competence-induced protein CinA AM393_RS02575 f8a7c4919349605595235be1d3241a5f 398 Gene3D G3DSA:3.90.950.20 244 314 0.042 T 28-03-2018 AM393_RS02575 f8a7c4919349605595235be1d3241a5f 398 Gene3D G3DSA:3.40.980.10 1 172 1.0E-40 T 28-03-2018 IPR001453 MoaB/Mog domain AM393_RS04700 4b1128856dfc4efbea42a9976e17906a 569 Gene3D G3DSA:3.40.50.970 1 203 9.1E-33 T 28-03-2018 AM393_RS04700 4b1128856dfc4efbea42a9976e17906a 569 Gene3D G3DSA:3.40.50.1220 204 396 6.7E-20 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AM393_RS04700 4b1128856dfc4efbea42a9976e17906a 569 SUPERFAMILY SSF52467 172 358 2.91E-18 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AM393_RS04700 4b1128856dfc4efbea42a9976e17906a 569 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 414 565 1.1E-19 T 28-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AM393_RS04700 4b1128856dfc4efbea42a9976e17906a 569 SUPERFAMILY SSF52518 416 567 2.68E-24 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold AM393_RS04700 4b1128856dfc4efbea42a9976e17906a 569 SUPERFAMILY SSF52518 7 186 2.56E-33 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold AM393_RS04700 4b1128856dfc4efbea42a9976e17906a 569 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 7 187 2.1E-41 T 28-03-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 AM393_RS04700 4b1128856dfc4efbea42a9976e17906a 569 Gene3D G3DSA:3.40.50.970 397 569 3.6E-20 T 28-03-2018 AM393_RS03155 b7b69ab5cde690d230808ec4737dd562 131 Pfam PF14534 Domain of unknown function (DUF4440) 9 117 1.8E-10 T 28-03-2018 IPR027843 Domain of unknown function DUF4440 AM393_RS03155 b7b69ab5cde690d230808ec4737dd562 131 SUPERFAMILY SSF54427 7 128 1.51E-28 T 28-03-2018 IPR032710 NTF2-like domain AM393_RS03155 b7b69ab5cde690d230808ec4737dd562 131 Gene3D G3DSA:3.10.450.50 5 131 1.2E-17 T 28-03-2018 AM393_RS14765 f9e05af4bcb4e8cb07f9542ed61292e1 523 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 12 28 - T 28-03-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AM393_RS14765 f9e05af4bcb4e8cb07f9542ed61292e1 523 SMART SM00917 369 500 4.3E-36 T 28-03-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AM393_RS14765 f9e05af4bcb4e8cb07f9542ed61292e1 523 Pfam PF00682 HMGL-like 4 273 1.2E-105 T 28-03-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 AM393_RS14765 f9e05af4bcb4e8cb07f9542ed61292e1 523 Pfam PF08502 LeuA allosteric (dimerisation) domain 369 499 6.7E-35 T 28-03-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AM393_RS14765 f9e05af4bcb4e8cb07f9542ed61292e1 523 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 199 212 - T 28-03-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AM393_RS14765 f9e05af4bcb4e8cb07f9542ed61292e1 523 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 4 497 3.9E-255 T 28-03-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AM393_RS14765 f9e05af4bcb4e8cb07f9542ed61292e1 523 Gene3D G3DSA:3.20.20.70 1 333 6.4E-107 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM393_RS14765 f9e05af4bcb4e8cb07f9542ed61292e1 523 SUPERFAMILY SSF110921 391 499 3.53E-26 T 28-03-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AM393_RS14765 f9e05af4bcb4e8cb07f9542ed61292e1 523 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 2 509 42.592 T 28-03-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AM393_RS14765 f9e05af4bcb4e8cb07f9542ed61292e1 523 SUPERFAMILY SSF51569 1 290 1.83E-97 T 28-03-2018 AM393_RS13200 951cef04f290d84be5b215f31b051329 472 Gene3D G3DSA:3.30.1360.60 4 78 1.2E-22 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AM393_RS13200 951cef04f290d84be5b215f31b051329 472 Pfam PF00367 phosphotransferase system, EIIB 11 40 2.4E-12 T 28-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AM393_RS13200 951cef04f290d84be5b215f31b051329 472 Pfam PF02378 Phosphotransferase system, EIIC 112 404 1.2E-32 T 28-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AM393_RS13200 951cef04f290d84be5b215f31b051329 472 SUPERFAMILY SSF55604 10 81 4.18E-19 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AM393_RS13200 951cef04f290d84be5b215f31b051329 472 TIGRFAM TIGR01992 PTS-IIBC-Tre: PTS system, trehalose-specific IIBC component 6 460 5.1E-217 T 28-03-2018 IPR011296 Phosphotransferase system, trehalose-specific IIBC component GO:0015574|GO:0015771|GO:0016021 KEGG: 00230+2.7.1.20|KEGG: 00500+2.7.1.201|MetaCyc: PWY-6619 AM393_RS13200 951cef04f290d84be5b215f31b051329 472 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 30 111 1.2E-16 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AM393_RS13200 951cef04f290d84be5b215f31b051329 472 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 21 38 - T 28-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AM393_RS14565 8927731f74bfa0a8e873fa43919df020 177 Pfam PF02525 Flavodoxin-like fold 2 167 1.3E-39 T 28-03-2018 IPR003680 Flavodoxin-like fold AM393_RS14565 8927731f74bfa0a8e873fa43919df020 177 Hamap MF_01414 Glutathione-regulated potassium-efflux system ancillary protein KefF [kefF]. 1 173 53.54 T 28-03-2018 IPR023948 Glutathione-regulated potassium-efflux system ancillary protein KefF GO:0006813 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 AM393_RS14565 8927731f74bfa0a8e873fa43919df020 177 SUPERFAMILY SSF52218 2 170 4.66E-46 T 28-03-2018 IPR029039 Flavoprotein-like domain AM393_RS14565 8927731f74bfa0a8e873fa43919df020 177 Gene3D G3DSA:3.40.50.360 1 176 6.0E-41 T 28-03-2018 IPR029039 Flavoprotein-like domain AM393_RS11345 1152b6050e2a287ef67b11c88388fa11 246 Pfam PF03808 Glycosyl transferase WecB/TagA/CpsF family 66 231 5.6E-52 T 28-03-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622 AM393_RS11345 1152b6050e2a287ef67b11c88388fa11 246 Gene3D G3DSA:3.40.50.300 26 243 2.9E-5 T 28-03-2018 AM393_RS11345 1152b6050e2a287ef67b11c88388fa11 246 TIGRFAM TIGR00696 wecG_tagA_cpsF: glycosyltransferase, WecB/TagA/CpsF family 61 237 5.5E-77 T 28-03-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622 AM393_RS11345 1152b6050e2a287ef67b11c88388fa11 246 Hamap MF_01001 UDP-N-acetyl-D-mannosaminuronic acid transferase [wecG]. 1 246 62.726 T 28-03-2018 IPR023085 UDP-N-acetyl-D-mannosaminuronic acid transferase GO:0009246|GO:0016758 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622 AM393_RS03660 2c65cc46862f500405128c013fd65338 378 SUPERFAMILY SSF103473 7 370 9.94E-35 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS03660 2c65cc46862f500405128c013fd65338 378 Gene3D G3DSA:1.20.1250.20 194 372 1.1E-9 T 28-03-2018 AM393_RS03660 2c65cc46862f500405128c013fd65338 378 Pfam PF12832 MFS_1 like family 8 358 4.8E-43 T 28-03-2018 IPR024989 Major facilitator superfamily associated domain AM393_RS03660 2c65cc46862f500405128c013fd65338 378 Gene3D G3DSA:1.20.1250.20 4 191 9.1E-13 T 28-03-2018 AM393_RS03660 2c65cc46862f500405128c013fd65338 378 PIRSF PIRSF004925 1 378 2.1E-114 T 28-03-2018 IPR026032 Probable 3-phenylpropionic acid transporter AM393_RS20785 257c4dc2b3c6d4a64abd5a9d32325116 334 Gene3D G3DSA:1.20.272.10 208 329 1.8E-19 T 28-03-2018 AM393_RS20785 257c4dc2b3c6d4a64abd5a9d32325116 334 SUPERFAMILY SSF48019 209 327 6.97E-35 T 28-03-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 AM393_RS20785 257c4dc2b3c6d4a64abd5a9d32325116 334 Pfam PF13177 DNA polymerase III, delta subunit 11 166 9.1E-42 T 28-03-2018 AM393_RS20785 257c4dc2b3c6d4a64abd5a9d32325116 334 Pfam PF09115 DNA polymerase III, delta subunit, C terminal 209 320 8.0E-37 T 28-03-2018 IPR015199 DNA polymerase III, delta subunit, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM393_RS20785 257c4dc2b3c6d4a64abd5a9d32325116 334 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 12 200 1.3E-58 T 28-03-2018 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM393_RS20785 257c4dc2b3c6d4a64abd5a9d32325116 334 SUPERFAMILY SSF52540 1 206 1.04E-46 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS20785 257c4dc2b3c6d4a64abd5a9d32325116 334 Gene3D G3DSA:1.10.8.10 169 206 2.6E-13 T 28-03-2018 AM393_RS20785 257c4dc2b3c6d4a64abd5a9d32325116 334 Gene3D G3DSA:3.40.50.300 8 165 5.8E-23 T 28-03-2018 AM393_RS25855 58ae8524c78ad74d37dbd111dd1a6ec3 256 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 253 1.3E-56 T 28-03-2018 AM393_RS25855 58ae8524c78ad74d37dbd111dd1a6ec3 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 2.1E-13 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS25855 58ae8524c78ad74d37dbd111dd1a6ec3 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 2.1E-13 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS25855 58ae8524c78ad74d37dbd111dd1a6ec3 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 2.1E-13 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS25855 58ae8524c78ad74d37dbd111dd1a6ec3 256 Gene3D G3DSA:3.40.50.720 1 42 1.7E-8 T 28-03-2018 AM393_RS25855 58ae8524c78ad74d37dbd111dd1a6ec3 256 Gene3D G3DSA:3.40.50.720 43 256 6.8E-59 T 28-03-2018 AM393_RS25855 58ae8524c78ad74d37dbd111dd1a6ec3 256 TIGRFAM TIGR01963 PHB_DH: 3-hydroxybutyrate dehydrogenase 6 256 2.2E-103 T 28-03-2018 IPR011294 3-hydroxybutyrate dehydrogenase GO:0003858|GO:0055114 AM393_RS25855 58ae8524c78ad74d37dbd111dd1a6ec3 256 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM393_RS25855 58ae8524c78ad74d37dbd111dd1a6ec3 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 2.6E-40 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS25855 58ae8524c78ad74d37dbd111dd1a6ec3 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 2.6E-40 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS25855 58ae8524c78ad74d37dbd111dd1a6ec3 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 2.6E-40 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS25855 58ae8524c78ad74d37dbd111dd1a6ec3 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 2.6E-40 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS25855 58ae8524c78ad74d37dbd111dd1a6ec3 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 2.6E-40 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS25855 58ae8524c78ad74d37dbd111dd1a6ec3 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 2.6E-40 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS25855 58ae8524c78ad74d37dbd111dd1a6ec3 256 SUPERFAMILY SSF51735 1 255 6.85E-73 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS03330 dbfdca5c171d38ddf55bdba3bbe0e772 660 Gene3D G3DSA:3.30.70.20 90 147 1.7E-13 T 28-03-2018 AM393_RS03330 dbfdca5c171d38ddf55bdba3bbe0e772 660 Gene3D G3DSA:1.10.1060.10 177 325 2.1E-38 T 28-03-2018 AM393_RS03330 dbfdca5c171d38ddf55bdba3bbe0e772 660 Gene3D G3DSA:3.30.70.20 21 59 1.1E-6 T 28-03-2018 AM393_RS03330 dbfdca5c171d38ddf55bdba3bbe0e772 660 PRINTS PR00419 Adrenodoxin reductase family signature 330 352 9.7E-37 T 28-03-2018 AM393_RS03330 dbfdca5c171d38ddf55bdba3bbe0e772 660 PRINTS PR00419 Adrenodoxin reductase family signature 506 519 9.7E-37 T 28-03-2018 AM393_RS03330 dbfdca5c171d38ddf55bdba3bbe0e772 660 PRINTS PR00419 Adrenodoxin reductase family signature 395 405 9.7E-37 T 28-03-2018 AM393_RS03330 dbfdca5c171d38ddf55bdba3bbe0e772 660 PRINTS PR00419 Adrenodoxin reductase family signature 353 366 9.7E-37 T 28-03-2018 AM393_RS03330 dbfdca5c171d38ddf55bdba3bbe0e772 660 PRINTS PR00419 Adrenodoxin reductase family signature 472 486 9.7E-37 T 28-03-2018 AM393_RS03330 dbfdca5c171d38ddf55bdba3bbe0e772 660 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 87 98 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM393_RS03330 dbfdca5c171d38ddf55bdba3bbe0e772 660 Gene3D G3DSA:3.50.50.60 497 583 1.7E-15 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS03330 dbfdca5c171d38ddf55bdba3bbe0e772 660 Gene3D G3DSA:3.50.50.60 421 496 5.1E-19 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS03330 dbfdca5c171d38ddf55bdba3bbe0e772 660 Gene3D G3DSA:3.30.70.20 1 20 0.023 T 28-03-2018 AM393_RS03330 dbfdca5c171d38ddf55bdba3bbe0e772 660 SUPERFAMILY SSF51971 328 583 3.12E-66 T 28-03-2018 AM393_RS03330 dbfdca5c171d38ddf55bdba3bbe0e772 660 SUPERFAMILY SSF54862 1 161 5.86E-43 T 28-03-2018 AM393_RS03330 dbfdca5c171d38ddf55bdba3bbe0e772 660 SUPERFAMILY SSF54862 197 293 5.86E-43 T 28-03-2018 AM393_RS03330 dbfdca5c171d38ddf55bdba3bbe0e772 660 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 206 316 2.0E-36 T 28-03-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 AM393_RS03330 dbfdca5c171d38ddf55bdba3bbe0e772 660 Gene3D G3DSA:3.40.50.720 326 420 1.1E-16 T 28-03-2018 AM393_RS03330 dbfdca5c171d38ddf55bdba3bbe0e772 660 Pfam PF13247 4Fe-4S dicluster domain 55 145 6.7E-10 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM393_RS03330 dbfdca5c171d38ddf55bdba3bbe0e772 660 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 329 641 2.3E-21 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS03330 dbfdca5c171d38ddf55bdba3bbe0e772 660 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 189 652 2.4E-248 T 28-03-2018 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 AM393_RS03330 dbfdca5c171d38ddf55bdba3bbe0e772 660 Gene3D G3DSA:3.30.70.20 60 89 4.3E-9 T 28-03-2018 AM393_RS03330 dbfdca5c171d38ddf55bdba3bbe0e772 660 Gene3D G3DSA:3.50.50.60 584 659 1.3E-9 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS18240 b8d6051873f1a168e0f6eb0e7ca30335 136 Hamap MF_00954 Regulator of nucleoside diphosphate kinase [rnk]. 1 136 43.379 T 28-03-2018 IPR028625 Regulator of nucleoside diphosphate kinase GO:0065007|GO:0070063 AM393_RS18240 b8d6051873f1a168e0f6eb0e7ca30335 136 SUPERFAMILY SSF54534 49 126 4.58E-17 T 28-03-2018 AM393_RS18240 b8d6051873f1a168e0f6eb0e7ca30335 136 PIRSF PIRSF006092 21 128 4.2E-23 T 28-03-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 AM393_RS18240 b8d6051873f1a168e0f6eb0e7ca30335 136 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 50 124 1.9E-19 T 28-03-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 AM393_RS18240 b8d6051873f1a168e0f6eb0e7ca30335 136 Gene3D G3DSA:3.10.50.30 45 136 5.1E-22 T 28-03-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 AM393_RS18240 b8d6051873f1a168e0f6eb0e7ca30335 136 Pfam PF14760 Rnk N-terminus 4 43 2.8E-13 T 28-03-2018 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain AM393_RS18240 b8d6051873f1a168e0f6eb0e7ca30335 136 Gene3D G3DSA:1.10.286.20 3 43 3.9E-14 T 28-03-2018 AM393_RS20755 7fd51e3c69603b72afb088dafa96799a 244 Gene3D G3DSA:3.40.50.720 158 242 4.3E-28 T 28-03-2018 AM393_RS20755 7fd51e3c69603b72afb088dafa96799a 244 SUPERFAMILY SSF51735 4 243 3.88E-88 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS20755 7fd51e3c69603b72afb088dafa96799a 244 Gene3D G3DSA:3.40.50.720 2 157 1.7E-51 T 28-03-2018 AM393_RS20755 7fd51e3c69603b72afb088dafa96799a 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 3.2E-15 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS20755 7fd51e3c69603b72afb088dafa96799a 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 3.2E-15 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS20755 7fd51e3c69603b72afb088dafa96799a 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 3.2E-15 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS20755 7fd51e3c69603b72afb088dafa96799a 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 5.7E-52 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS20755 7fd51e3c69603b72afb088dafa96799a 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 5.7E-52 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS20755 7fd51e3c69603b72afb088dafa96799a 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 225 5.7E-52 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS20755 7fd51e3c69603b72afb088dafa96799a 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 5.7E-52 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS20755 7fd51e3c69603b72afb088dafa96799a 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 5.7E-52 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS20755 7fd51e3c69603b72afb088dafa96799a 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 5.7E-52 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS20755 7fd51e3c69603b72afb088dafa96799a 244 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 241 8.3E-69 T 28-03-2018 AM393_RS20755 7fd51e3c69603b72afb088dafa96799a 244 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 187 6.3E-6 T 28-03-2018 AM393_RS20755 7fd51e3c69603b72afb088dafa96799a 244 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 8 242 2.4E-102 T 28-03-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AM393_RS20755 7fd51e3c69603b72afb088dafa96799a 244 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM393_RS02315 7e73fbbe83fab99785bfde11cbf40269 114 ProDom PD073777 YEJG CYTOPLASMIC SIMILAR Y2914 YPO1269 STY2456 ECS3073 ESCHERICHIA COLI 1 114 4.0E-53 T 28-03-2018 IPR020489 Uncharacterised protein family YejG AM393_RS02315 7e73fbbe83fab99785bfde11cbf40269 114 Pfam PF13989 YejG-like protein 5 108 9.3E-50 T 28-03-2018 IPR020489 Uncharacterised protein family YejG AM393_RS21575 b536380dd55f64c06ca404715349df74 761 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 70 761 1.1E-79 T 28-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AM393_RS21575 b536380dd55f64c06ca404715349df74 761 Pfam PF07715 TonB-dependent Receptor Plug Domain 69 168 1.1E-18 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM393_RS21575 b536380dd55f64c06ca404715349df74 761 Gene3D G3DSA:2.170.130.10 32 176 3.0E-22 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM393_RS21575 b536380dd55f64c06ca404715349df74 761 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 49 - T 28-03-2018 IPR010916 TonB box, conserved site AM393_RS21575 b536380dd55f64c06ca404715349df74 761 Pfam PF00593 TonB dependent receptor 243 759 6.5E-54 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM393_RS21575 b536380dd55f64c06ca404715349df74 761 SUPERFAMILY SSF56935 63 761 5.73E-124 T 28-03-2018 AM393_RS21575 b536380dd55f64c06ca404715349df74 761 Gene3D G3DSA:2.40.170.20 184 761 4.7E-88 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM393_RS11830 5ede600430e500372359ef9b19b2b096 431 SUPERFAMILY SSF56059 104 325 5.66E-70 T 28-03-2018 AM393_RS11830 5ede600430e500372359ef9b19b2b096 431 SMART SM01209 103 296 2.4E-143 T 28-03-2018 AM393_RS11830 5ede600430e500372359ef9b19b2b096 431 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 290 297 - T 28-03-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AM393_RS11830 5ede600430e500372359ef9b19b2b096 431 SMART SM01210 330 424 2.9E-54 T 28-03-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AM393_RS11830 5ede600430e500372359ef9b19b2b096 431 SUPERFAMILY SSF51246 328 424 9.42E-33 T 28-03-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 AM393_RS11830 5ede600430e500372359ef9b19b2b096 431 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 425 4.4E-187 T 28-03-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AM393_RS11830 5ede600430e500372359ef9b19b2b096 431 Gene3D G3DSA:3.30.470.20 191 329 2.6E-62 T 28-03-2018 AM393_RS11830 5ede600430e500372359ef9b19b2b096 431 Gene3D G3DSA:3.40.50.20 2 95 1.8E-37 T 28-03-2018 AM393_RS11830 5ede600430e500372359ef9b19b2b096 431 Gene3D G3DSA:3.30.1490.20 135 189 3.1E-23 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AM393_RS11830 5ede600430e500372359ef9b19b2b096 431 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 424 44.437 T 28-03-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AM393_RS11830 5ede600430e500372359ef9b19b2b096 431 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 102 8.9E-36 T 28-03-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AM393_RS11830 5ede600430e500372359ef9b19b2b096 431 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 332 422 6.1E-29 T 28-03-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AM393_RS11830 5ede600430e500372359ef9b19b2b096 431 SUPERFAMILY SSF52440 1 103 6.33E-38 T 28-03-2018 IPR016185 Pre-ATP-grasp domain AM393_RS11830 5ede600430e500372359ef9b19b2b096 431 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 103 296 4.5E-84 T 28-03-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AM393_RS11830 5ede600430e500372359ef9b19b2b096 431 Gene3D G3DSA:3.90.600.10 330 425 8.0E-34 T 28-03-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AM393_RS10990 84c7360eda8c007adaef671ef2e9e5bf 342 SMART SM00354 9 79 2.2E-30 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM393_RS10990 84c7360eda8c007adaef671ef2e9e5bf 342 SUPERFAMILY SSF47413 10 67 1.69E-14 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM393_RS10990 84c7360eda8c007adaef671ef2e9e5bf 342 Gene3D G3DSA:3.40.50.2300 63 182 3.1E-29 T 28-03-2018 AM393_RS10990 84c7360eda8c007adaef671ef2e9e5bf 342 Gene3D G3DSA:1.10.260.40 10 62 2.9E-18 T 28-03-2018 AM393_RS10990 84c7360eda8c007adaef671ef2e9e5bf 342 ProSitePatterns PS00356 LacI-type HTH domain signature. 12 30 - T 28-03-2018 AM393_RS10990 84c7360eda8c007adaef671ef2e9e5bf 342 SUPERFAMILY SSF53822 68 338 1.57E-91 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AM393_RS10990 84c7360eda8c007adaef671ef2e9e5bf 342 Pfam PF00356 Bacterial regulatory proteins, lacI family 11 56 3.6E-19 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM393_RS10990 84c7360eda8c007adaef671ef2e9e5bf 342 Pfam PF13377 Periplasmic binding protein-like domain 176 337 7.6E-42 T 28-03-2018 AM393_RS10990 84c7360eda8c007adaef671ef2e9e5bf 342 Gene3D G3DSA:3.40.50.2300 183 342 1.1E-47 T 28-03-2018 AM393_RS01455 1d6415640e318b9488042be662ebbad7 325 SUPERFAMILY SSF51735 116 287 5.31E-39 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS01455 1d6415640e318b9488042be662ebbad7 325 SMART SM00829 7 321 1.7E-5 T 28-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AM393_RS01455 1d6415640e318b9488042be662ebbad7 325 Gene3D G3DSA:3.40.50.720 161 269 3.8E-14 T 28-03-2018 AM393_RS01455 1d6415640e318b9488042be662ebbad7 325 Pfam PF00107 Zinc-binding dehydrogenase 158 280 9.4E-18 T 28-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AM393_RS01455 1d6415640e318b9488042be662ebbad7 325 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 2 323 1.2E-134 T 28-03-2018 IPR014188 Acrylyl-CoA reductase AcuI AM393_RS01455 1d6415640e318b9488042be662ebbad7 325 SUPERFAMILY SSF50129 1 144 2.13E-44 T 28-03-2018 IPR011032 GroES-like AM393_RS01455 1d6415640e318b9488042be662ebbad7 325 Gene3D G3DSA:3.90.180.10 1 160 6.5E-33 T 28-03-2018 AM393_RS20125 1a5c2783445fcce093463a45ce5b3b7d 257 SUPERFAMILY SSF52540 13 211 2.33E-63 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS20125 1a5c2783445fcce093463a45ce5b3b7d 257 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS20125 1a5c2783445fcce093463a45ce5b3b7d 257 Pfam PF00005 ABC transporter 27 160 4.3E-29 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS20125 1a5c2783445fcce093463a45ce5b3b7d 257 Gene3D G3DSA:3.40.50.300 12 218 3.0E-57 T 28-03-2018 AM393_RS20125 1a5c2783445fcce093463a45ce5b3b7d 257 SMART SM00382 36 210 4.9E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS16200 237613d0e631214ff5179bd9367c7022 213 SUPERFAMILY SSF52499 3 204 7.98E-49 T 28-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AM393_RS16200 237613d0e631214ff5179bd9367c7022 213 Pfam PF00857 Isochorismatase family 12 165 5.0E-24 T 28-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AM393_RS16200 237613d0e631214ff5179bd9367c7022 213 Gene3D G3DSA:3.40.50.850 2 208 1.6E-34 T 28-03-2018 AM393_RS04005 125e50825dc953f501b120f9c62f3190 428 Pfam PF01595 Domain of unknown function DUF21 13 184 7.9E-50 T 28-03-2018 IPR002550 Domain of unknown function DUF21 AM393_RS04005 125e50825dc953f501b120f9c62f3190 428 Gene3D G3DSA:3.10.580.10 185 337 2.0E-20 T 28-03-2018 AM393_RS04005 125e50825dc953f501b120f9c62f3190 428 SMART SM01091 342 420 1.5E-25 T 28-03-2018 IPR005170 Transporter-associated domain AM393_RS04005 125e50825dc953f501b120f9c62f3190 428 SUPERFAMILY SSF56176 340 422 1.99E-21 T 28-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AM393_RS04005 125e50825dc953f501b120f9c62f3190 428 SUPERFAMILY SSF54631 192 329 8.84E-23 T 28-03-2018 AM393_RS04005 125e50825dc953f501b120f9c62f3190 428 Pfam PF03471 Transporter associated domain 344 418 9.3E-19 T 28-03-2018 IPR005170 Transporter-associated domain AM393_RS04005 125e50825dc953f501b120f9c62f3190 428 Gene3D G3DSA:3.30.465.10 338 428 2.1E-20 T 28-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AM393_RS04005 125e50825dc953f501b120f9c62f3190 428 Pfam PF00571 CBS domain 270 326 2.2E-5 T 28-03-2018 IPR000644 CBS domain AM393_RS13085 8bceb497b509d04452516b6b7f7f900c 402 Pfam PF14486 Domain of unknown function (DUF4432) 63 368 4.7E-113 T 28-03-2018 IPR027839 Protein of unknown function DUF4432 AM393_RS13085 8bceb497b509d04452516b6b7f7f900c 402 Gene3D G3DSA:2.70.98.10 56 371 1.4E-20 T 28-03-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 AM393_RS07690 849ed9a0ec6465fcdd24adbd02f434a6 162 Gene3D G3DSA:3.40.930.10 8 157 1.7E-38 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 AM393_RS07690 849ed9a0ec6465fcdd24adbd02f434a6 162 SUPERFAMILY SSF55804 9 155 2.35E-42 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 AM393_RS07690 849ed9a0ec6465fcdd24adbd02f434a6 162 TIGRFAM TIGR01419 nitro_reg_IIA: PTS IIA-like nitrogen-regulatory protein PtsN 9 155 7.2E-62 T 28-03-2018 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN GO:0008982|GO:0009401 AM393_RS07690 849ed9a0ec6465fcdd24adbd02f434a6 162 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 13 155 3.8E-37 T 28-03-2018 IPR002178 PTS EIIA type-2 domain AM393_RS07690 849ed9a0ec6465fcdd24adbd02f434a6 162 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 58 74 - T 28-03-2018 IPR002178 PTS EIIA type-2 domain AM393_RS09575 45f982b84d3f9f3e45c803bb090a0890 155 Hamap MF_00821 Protein-export protein SecB [secB]. 1 145 33.323 T 28-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AM393_RS09575 45f982b84d3f9f3e45c803bb090a0890 155 SUPERFAMILY SSF54611 3 141 1.85E-53 T 28-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AM393_RS09575 45f982b84d3f9f3e45c803bb090a0890 155 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 13 30 1.8E-41 T 28-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AM393_RS09575 45f982b84d3f9f3e45c803bb090a0890 155 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 97 119 1.8E-41 T 28-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AM393_RS09575 45f982b84d3f9f3e45c803bb090a0890 155 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 73 93 1.8E-41 T 28-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AM393_RS09575 45f982b84d3f9f3e45c803bb090a0890 155 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 123 141 1.8E-41 T 28-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AM393_RS09575 45f982b84d3f9f3e45c803bb090a0890 155 Gene3D G3DSA:3.10.420.10 1 153 1.9E-56 T 28-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AM393_RS09575 45f982b84d3f9f3e45c803bb090a0890 155 Pfam PF02556 Preprotein translocase subunit SecB 5 144 1.3E-57 T 28-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AM393_RS09575 45f982b84d3f9f3e45c803bb090a0890 155 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 6 147 1.7E-69 T 28-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AM393_RS18495 2977262b2da8e83700f2e270021485e7 651 SUPERFAMILY SSF51261 498 646 5.76E-52 T 28-03-2018 IPR011055 Duplicated hybrid motif AM393_RS18495 2977262b2da8e83700f2e270021485e7 651 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 503 623 3.2E-48 T 28-03-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 AM393_RS18495 2977262b2da8e83700f2e270021485e7 651 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 565 577 - T 28-03-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 AM393_RS18495 2977262b2da8e83700f2e270021485e7 651 TIGRFAM TIGR01998 PTS-II-BC-nag: PTS system, N-acetylglucosamine-specific IIBC component 3 463 6.1E-209 T 28-03-2018 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component GO:0008982|GO:0009401|GO:0015572|GO:0016021|GO:0019866 AM393_RS18495 2977262b2da8e83700f2e270021485e7 651 SUPERFAMILY SSF55604 392 465 1.57E-18 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AM393_RS18495 2977262b2da8e83700f2e270021485e7 651 Pfam PF02378 Phosphotransferase system, EIIC 12 300 8.5E-75 T 28-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AM393_RS18495 2977262b2da8e83700f2e270021485e7 651 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 405 422 - T 28-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AM393_RS18495 2977262b2da8e83700f2e270021485e7 651 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 360 452 1.2E-27 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AM393_RS18495 2977262b2da8e83700f2e270021485e7 651 Gene3D G3DSA:3.30.1360.60 390 466 4.5E-24 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AM393_RS18495 2977262b2da8e83700f2e270021485e7 651 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 502 627 3.8E-47 T 28-03-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 AM393_RS18495 2977262b2da8e83700f2e270021485e7 651 Pfam PF00367 phosphotransferase system, EIIB 396 427 2.7E-12 T 28-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AM393_RS18495 2977262b2da8e83700f2e270021485e7 651 Gene3D G3DSA:2.70.70.10 490 650 5.4E-55 T 28-03-2018 AM393_RS17940 2b16f5f786e161c8e3ff246bdcf793bf 311 Gene3D G3DSA:3.40.50.2300 19 141 1.7E-25 T 28-03-2018 AM393_RS17940 2b16f5f786e161c8e3ff246bdcf793bf 311 Gene3D G3DSA:3.40.50.2300 142 306 5.0E-31 T 28-03-2018 AM393_RS17940 2b16f5f786e161c8e3ff246bdcf793bf 311 SUPERFAMILY SSF53822 25 304 5.22E-69 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AM393_RS17940 2b16f5f786e161c8e3ff246bdcf793bf 311 Pfam PF13407 Periplasmic binding protein domain 29 282 1.1E-50 T 28-03-2018 IPR025997 Periplasmic binding protein AM393_RS14480 a99d9cedffb4367339fb87ec3bad1d66 209 SUPERFAMILY SSF50447 1 80 7.77E-14 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain AM393_RS14480 a99d9cedffb4367339fb87ec3bad1d66 209 Gene3D G3DSA:3.30.980.10 85 209 7.5E-13 T 28-03-2018 AM393_RS14480 a99d9cedffb4367339fb87ec3bad1d66 209 SUPERFAMILY SSF55186 85 201 2.75E-22 T 28-03-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 AM393_RS07320 5ae1aec1198895592d999ef3120b6cc4 304 Gene3D G3DSA:2.20.150.10 10 43 7.1E-10 T 28-03-2018 IPR023314 Tagatose-6-phosphate kinase/1-phosphofructokinase N-terminal domain AM393_RS07320 5ae1aec1198895592d999ef3120b6cc4 304 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 2 301 2.3E-93 T 28-03-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 AM393_RS07320 5ae1aec1198895592d999ef3120b6cc4 304 TIGRFAM TIGR03828 pfkB: 1-phosphofructokinase 2 301 2.4E-93 T 28-03-2018 IPR022463 Fructose 1-phosphate kinase GO:0008662 KEGG: 00051+2.7.1.56 AM393_RS07320 5ae1aec1198895592d999ef3120b6cc4 304 PIRSF PIRSF000535 1 304 1.4E-67 T 28-03-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 AM393_RS07320 5ae1aec1198895592d999ef3120b6cc4 304 Pfam PF00294 pfkB family carbohydrate kinase 11 287 1.5E-42 T 28-03-2018 IPR011611 Carbohydrate kinase PfkB AM393_RS07320 5ae1aec1198895592d999ef3120b6cc4 304 SUPERFAMILY SSF53613 2 286 4.99E-60 T 28-03-2018 IPR029056 Ribokinase-like AM393_RS07320 5ae1aec1198895592d999ef3120b6cc4 304 Gene3D G3DSA:3.40.1190.20 44 304 4.5E-40 T 28-03-2018 IPR029056 Ribokinase-like AM393_RS19365 b96f4965427a103e759d71d4ba585c3c 413 Gene3D G3DSA:1.20.1250.20 3 200 1.9E-21 T 28-03-2018 AM393_RS19365 b96f4965427a103e759d71d4ba585c3c 413 PRINTS PR00174 LacY proton/sugar symporter family signature 339 359 1.8E-64 T 28-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 AM393_RS19365 b96f4965427a103e759d71d4ba585c3c 413 PRINTS PR00174 LacY proton/sugar symporter family signature 102 124 1.8E-64 T 28-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 AM393_RS19365 b96f4965427a103e759d71d4ba585c3c 413 PRINTS PR00174 LacY proton/sugar symporter family signature 67 96 1.8E-64 T 28-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 AM393_RS19365 b96f4965427a103e759d71d4ba585c3c 413 PRINTS PR00174 LacY proton/sugar symporter family signature 308 327 1.8E-64 T 28-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 AM393_RS19365 b96f4965427a103e759d71d4ba585c3c 413 PRINTS PR00174 LacY proton/sugar symporter family signature 253 274 1.8E-64 T 28-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 AM393_RS19365 b96f4965427a103e759d71d4ba585c3c 413 PRINTS PR00174 LacY proton/sugar symporter family signature 277 303 1.8E-64 T 28-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 AM393_RS19365 b96f4965427a103e759d71d4ba585c3c 413 PRINTS PR00174 LacY proton/sugar symporter family signature 144 162 1.8E-64 T 28-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 AM393_RS19365 b96f4965427a103e759d71d4ba585c3c 413 PRINTS PR00174 LacY proton/sugar symporter family signature 207 235 1.8E-64 T 28-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 AM393_RS19365 b96f4965427a103e759d71d4ba585c3c 413 TIGRFAM TIGR00882 2A0105: oligosaccharide:H+ symporter 6 392 1.3E-124 T 28-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 AM393_RS19365 b96f4965427a103e759d71d4ba585c3c 413 Gene3D G3DSA:1.20.1250.20 201 406 5.2E-23 T 28-03-2018 AM393_RS19365 b96f4965427a103e759d71d4ba585c3c 413 SUPERFAMILY SSF103473 5 396 1.92E-43 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS19365 b96f4965427a103e759d71d4ba585c3c 413 Pfam PF01306 LacY proton/sugar symporter 5 397 3.2E-125 T 28-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 AM393_RS00650 8ff354431463c523e0d0db312a270aab 289 SUPERFAMILY SSF46689 1 78 9.68E-21 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS00650 8ff354431463c523e0d0db312a270aab 289 Pfam PF01380 SIS domain 124 252 5.5E-28 T 28-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AM393_RS00650 8ff354431463c523e0d0db312a270aab 289 Pfam PF01418 Helix-turn-helix domain, rpiR family 1 76 4.4E-31 T 28-03-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 AM393_RS00650 8ff354431463c523e0d0db312a270aab 289 SUPERFAMILY SSF53697 94 277 1.75E-42 T 28-03-2018 AM393_RS00650 8ff354431463c523e0d0db312a270aab 289 Gene3D G3DSA:1.10.10.10 1 92 1.0E-27 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS00650 8ff354431463c523e0d0db312a270aab 289 Gene3D G3DSA:3.40.50.10490 93 279 5.4E-37 T 28-03-2018 AM393_RS12805 f96c0a641c2fb39e23bae45d3bdaeb6b 102 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 3 64 27.396 T 28-03-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 AM393_RS12805 f96c0a641c2fb39e23bae45d3bdaeb6b 102 SUPERFAMILY SSF50182 7 69 4.04E-24 T 28-03-2018 IPR010920 LSM domain AM393_RS12805 f96c0a641c2fb39e23bae45d3bdaeb6b 102 Pfam PF17209 Hfq protein 7 69 4.9E-31 T 28-03-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 AM393_RS12805 f96c0a641c2fb39e23bae45d3bdaeb6b 102 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 5 64 2.0E-29 T 28-03-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 AM393_RS12805 f96c0a641c2fb39e23bae45d3bdaeb6b 102 Gene3D G3DSA:2.30.30.100 4 73 1.1E-33 T 28-03-2018 AM393_RS22740 c29cfde2cf2c2545f57ebf1169ee84d8 459 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 30 452 2.7E-108 T 28-03-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 AM393_RS22740 c29cfde2cf2c2545f57ebf1169ee84d8 459 Gene3D G3DSA:1.20.1600.10 17 458 3.2E-93 T 28-03-2018 AM393_RS22740 c29cfde2cf2c2545f57ebf1169ee84d8 459 Pfam PF02321 Outer membrane efflux protein 57 244 1.8E-23 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AM393_RS22740 c29cfde2cf2c2545f57ebf1169ee84d8 459 Pfam PF02321 Outer membrane efflux protein 265 450 1.6E-21 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AM393_RS22740 c29cfde2cf2c2545f57ebf1169ee84d8 459 SUPERFAMILY SSF56954 2 454 1.57E-103 T 28-03-2018 AM393_RS05560 077b261e0b64f72039425b78ec608a42 253 SUPERFAMILY SSF51735 9 252 2.57E-74 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS05560 077b261e0b64f72039425b78ec608a42 253 TIGRFAM TIGR01832 kduD: 2-deoxy-D-gluconate 3-dehydrogenase 6 253 5.6E-135 T 28-03-2018 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase GO:0008678|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.12+1.1.1.127|MetaCyc: PWY-5515|MetaCyc: PWY-6507|MetaCyc: PWY-7562 AM393_RS05560 077b261e0b64f72039425b78ec608a42 253 Gene3D G3DSA:3.40.50.720 44 253 3.7E-58 T 28-03-2018 AM393_RS05560 077b261e0b64f72039425b78ec608a42 253 Gene3D G3DSA:3.40.50.720 3 43 3.6E-5 T 28-03-2018 AM393_RS05560 077b261e0b64f72039425b78ec608a42 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 1.8E-13 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS05560 077b261e0b64f72039425b78ec608a42 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 1.8E-13 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS05560 077b261e0b64f72039425b78ec608a42 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 1.8E-13 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS05560 077b261e0b64f72039425b78ec608a42 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM393_RS05560 077b261e0b64f72039425b78ec608a42 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 20 250 1.2E-55 T 28-03-2018 AM393_RS05560 077b261e0b64f72039425b78ec608a42 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 1.3E-38 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS05560 077b261e0b64f72039425b78ec608a42 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 1.3E-38 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS05560 077b261e0b64f72039425b78ec608a42 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 1.3E-38 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS05560 077b261e0b64f72039425b78ec608a42 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 1.3E-38 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS05560 077b261e0b64f72039425b78ec608a42 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 1.3E-38 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS05560 077b261e0b64f72039425b78ec608a42 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 1.3E-38 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS11710 a60ddc90156d60af097682dd3685e33b 121 Gene3D G3DSA:3.30.1390.10 51 121 1.5E-30 T 28-03-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AM393_RS11710 a60ddc90156d60af097682dd3685e33b 121 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 55 121 4.7E-31 T 28-03-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS11710 a60ddc90156d60af097682dd3685e33b 121 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 56 121 1.0E-27 T 28-03-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS11710 a60ddc90156d60af097682dd3685e33b 121 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 121 25.461 T 28-03-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS11710 a60ddc90156d60af097682dd3685e33b 121 Gene3D G3DSA:1.20.5.710 2 50 1.1E-17 T 28-03-2018 AM393_RS11710 a60ddc90156d60af097682dd3685e33b 121 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 121 2.5E-48 T 28-03-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS11710 a60ddc90156d60af097682dd3685e33b 121 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 4 49 1.1E-15 T 28-03-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS11710 a60ddc90156d60af097682dd3685e33b 121 SUPERFAMILY SSF48300 3 57 3.53E-16 T 28-03-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS11710 a60ddc90156d60af097682dd3685e33b 121 SUPERFAMILY SSF54736 50 121 5.41E-25 T 28-03-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AM393_RS23305 a18c2cfa5c76c002a550403389b15b2a 280 Pfam PF02311 AraC-like ligand binding domain 55 134 7.0E-7 T 28-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AM393_RS23305 a18c2cfa5c76c002a550403389b15b2a 280 Gene3D G3DSA:2.60.120.10 21 134 4.5E-7 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AM393_RS23305 a18c2cfa5c76c002a550403389b15b2a 280 SMART SM00342 197 279 2.1E-27 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM393_RS23305 a18c2cfa5c76c002a550403389b15b2a 280 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 248 263 3.1E-6 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM393_RS23305 a18c2cfa5c76c002a550403389b15b2a 280 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 263 279 3.1E-6 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM393_RS23305 a18c2cfa5c76c002a550403389b15b2a 280 SUPERFAMILY SSF51182 23 208 1.69E-12 T 28-03-2018 IPR011051 RmlC-like cupin domain AM393_RS23305 a18c2cfa5c76c002a550403389b15b2a 280 Pfam PF12833 Helix-turn-helix domain 203 278 1.1E-25 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM393_RS23305 a18c2cfa5c76c002a550403389b15b2a 280 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 234 275 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM393_RS23305 a18c2cfa5c76c002a550403389b15b2a 280 Gene3D G3DSA:1.10.10.60 232 280 8.0E-11 T 28-03-2018 AM393_RS23305 a18c2cfa5c76c002a550403389b15b2a 280 Gene3D G3DSA:1.10.10.60 177 231 2.8E-13 T 28-03-2018 AM393_RS23305 a18c2cfa5c76c002a550403389b15b2a 280 SUPERFAMILY SSF46689 233 279 2.81E-10 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS24945 7ec7932e88232868cc57f8540c6fd592 226 Pfam PF02665 Nitrate reductase gamma subunit 6 225 1.7E-79 T 28-03-2018 IPR023234 NarG-like domain AM393_RS24945 7ec7932e88232868cc57f8540c6fd592 226 TIGRFAM TIGR00351 narI: respiratory nitrate reductase, gamma subunit 2 226 1.1E-119 T 28-03-2018 IPR003816 Nitrate reductase, gamma subunit GO:0008940|GO:0009325|GO:0055114 KEGG: 00910+1.7.99.4 AM393_RS24945 7ec7932e88232868cc57f8540c6fd592 226 SUPERFAMILY SSF103501 3 225 2.35E-69 T 28-03-2018 IPR023234 NarG-like domain AM393_RS24945 7ec7932e88232868cc57f8540c6fd592 226 Gene3D G3DSA:1.20.950.20 2 217 1.2E-42 T 28-03-2018 AM393_RS15210 e52f424747186c9ccddcc030c17f689d 185 Pfam PF16537 Type II secretion system protein B 110 168 3.6E-20 T 28-03-2018 IPR032389 Type II secretion system protein B AM393_RS05595 f89fba7a0ba1e7adc2e0eed35bb239ee 292 Pfam PF00248 Aldo/keto reductase family 19 286 2.4E-47 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM393_RS05595 f89fba7a0ba1e7adc2e0eed35bb239ee 292 Gene3D G3DSA:3.20.20.100 11 292 4.9E-60 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM393_RS05595 f89fba7a0ba1e7adc2e0eed35bb239ee 292 SUPERFAMILY SSF51430 14 287 2.88E-62 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM393_RS05595 f89fba7a0ba1e7adc2e0eed35bb239ee 292 PRINTS PR00069 Aldo-keto reductase signature 220 244 7.4E-8 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM393_RS05595 f89fba7a0ba1e7adc2e0eed35bb239ee 292 PRINTS PR00069 Aldo-keto reductase signature 49 73 7.4E-8 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM393_RS05595 f89fba7a0ba1e7adc2e0eed35bb239ee 292 PRINTS PR00069 Aldo-keto reductase signature 150 167 7.4E-8 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM393_RS00435 9401d6902c74638dee27db4f06b51574 264 SUPERFAMILY SSF53335 4 246 7.92E-53 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM393_RS00435 9401d6902c74638dee27db4f06b51574 264 Gene3D G3DSA:3.40.50.150 1 264 4.9E-58 T 28-03-2018 AM393_RS00435 9401d6902c74638dee27db4f06b51574 264 PIRSF PIRSF018249 1 263 2.6E-87 T 28-03-2018 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted GO:0008168 AM393_RS00435 9401d6902c74638dee27db4f06b51574 264 Pfam PF08241 Methyltransferase domain 87 170 1.0E-14 T 28-03-2018 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 AM393_RS22405 39563c4baf91819b2618f6d87a94116e 180 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 18 165 1.6E-34 T 28-03-2018 IPR017734 Type VI secretion system, lipoprotein SciN AM393_RS22405 39563c4baf91819b2618f6d87a94116e 180 TIGRFAM TIGR03352 VI_chp_3: type VI secretion lipoprotein, VC_A0113 family 12 163 4.4E-22 T 28-03-2018 IPR017734 Type VI secretion system, lipoprotein SciN AM393_RS24475 ae70727aaa06c5e9959400e48a91be1f 242 ProSitePatterns PS00211 ABC transporters family signature. 129 143 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS24475 ae70727aaa06c5e9959400e48a91be1f 242 Gene3D G3DSA:3.40.50.300 2 214 1.6E-57 T 28-03-2018 AM393_RS24475 ae70727aaa06c5e9959400e48a91be1f 242 SMART SM00382 30 203 1.4E-10 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS24475 ae70727aaa06c5e9959400e48a91be1f 242 SUPERFAMILY SSF52540 5 202 8.28E-54 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS24475 ae70727aaa06c5e9959400e48a91be1f 242 Pfam PF00005 ABC transporter 22 156 2.9E-26 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS02725 d0f1b29eef0976bdea914ee5763b9f71 610 Pfam PF03600 Citrate transporter 16 197 1.3E-37 T 28-03-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 AM393_RS02725 d0f1b29eef0976bdea914ee5763b9f71 610 Pfam PF03600 Citrate transporter 430 607 4.8E-21 T 28-03-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 AM393_RS02725 d0f1b29eef0976bdea914ee5763b9f71 610 ProSitePatterns PS01271 Sodium:sulfate symporter family signature. 558 574 - T 28-03-2018 IPR031312 Sodium/sulphate symporter, conserved site Reactome: R-HSA-433137 AM393_RS02725 d0f1b29eef0976bdea914ee5763b9f71 610 Gene3D G3DSA:3.30.70.1450 322 398 1.7E-16 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AM393_RS02725 d0f1b29eef0976bdea914ee5763b9f71 610 SUPERFAMILY SSF116726 322 394 1.7E-16 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AM393_RS02725 d0f1b29eef0976bdea914ee5763b9f71 610 Gene3D G3DSA:3.30.70.1450 217 306 1.1E-10 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AM393_RS02725 d0f1b29eef0976bdea914ee5763b9f71 610 Pfam PF02080 TrkA-C domain 231 297 5.2E-11 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AM393_RS02725 d0f1b29eef0976bdea914ee5763b9f71 610 Pfam PF02080 TrkA-C domain 326 394 8.3E-13 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AM393_RS02725 d0f1b29eef0976bdea914ee5763b9f71 610 SUPERFAMILY SSF116726 230 295 2.62E-7 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AM393_RS07030 fc611243225f0e51d1af8b236dd1f4cc 117 SUPERFAMILY SSF52968 2 116 4.97E-35 T 28-03-2018 IPR010254 B12-dependent dehydratases, beta subunit AM393_RS07030 fc611243225f0e51d1af8b236dd1f4cc 117 Pfam PF02288 Dehydratase medium subunit 19 113 1.9E-24 T 28-03-2018 IPR003208 Diol/glycerol dehydratase/dehydratase reactivating factor AM393_RS07030 fc611243225f0e51d1af8b236dd1f4cc 117 Gene3D G3DSA:3.40.50.10150 5 114 1.2E-31 T 28-03-2018 IPR010254 B12-dependent dehydratases, beta subunit AM393_RS07030 fc611243225f0e51d1af8b236dd1f4cc 117 PIRSF PIRSF011503 1 116 3.0E-40 T 28-03-2018 IPR009192 Diol/glycerol dehydratase reactivating factor, small subunit AM393_RS23875 5c7b2dafa5876db74c1f2338dc9bbe9a 294 Pfam PF03466 LysR substrate binding domain 90 293 7.5E-39 T 28-03-2018 IPR005119 LysR, substrate-binding AM393_RS23875 5c7b2dafa5876db74c1f2338dc9bbe9a 294 Gene3D G3DSA:3.40.190.10 90 176 3.2E-20 T 28-03-2018 AM393_RS23875 5c7b2dafa5876db74c1f2338dc9bbe9a 294 Gene3D G3DSA:1.10.10.10 1 87 9.0E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS23875 5c7b2dafa5876db74c1f2338dc9bbe9a 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 4.9E-17 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS23875 5c7b2dafa5876db74c1f2338dc9bbe9a 294 SUPERFAMILY SSF46785 1 112 2.07E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS23875 5c7b2dafa5876db74c1f2338dc9bbe9a 294 SUPERFAMILY SSF53850 91 293 7.7E-40 T 28-03-2018 AM393_RS23875 5c7b2dafa5876db74c1f2338dc9bbe9a 294 Gene3D G3DSA:3.40.190.10 177 263 2.4E-19 T 28-03-2018 AM393_RS00905 f30c9ebebc49096a4504ee9b62f9db68 222 Gene3D G3DSA:1.10.3720.10 5 220 2.3E-46 T 28-03-2018 AM393_RS00905 f30c9ebebc49096a4504ee9b62f9db68 222 SUPERFAMILY SSF161098 13 200 2.75E-52 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS00905 f30c9ebebc49096a4504ee9b62f9db68 222 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 109 4.1E-35 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AM393_RS00905 f30c9ebebc49096a4504ee9b62f9db68 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 214 7.8E-26 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS08310 cdf56cb1ea4b195336705719f90d9775 273 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 7.9E-34 T 28-03-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM393_RS08310 cdf56cb1ea4b195336705719f90d9775 273 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 4 272 1.2E-131 T 28-03-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 AM393_RS08310 cdf56cb1ea4b195336705719f90d9775 273 Gene3D G3DSA:4.10.950.10 197 272 4.7E-35 T 28-03-2018 IPR014726 Ribosomal protein L2, domain 3 AM393_RS08310 cdf56cb1ea4b195336705719f90d9775 273 SMART SM01383 42 118 1.9E-48 T 28-03-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM393_RS08310 cdf56cb1ea4b195336705719f90d9775 273 SUPERFAMILY SSF50249 3 125 5.14E-50 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM393_RS08310 cdf56cb1ea4b195336705719f90d9775 273 PIRSF PIRSF002158 12 273 2.9E-100 T 28-03-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM393_RS08310 cdf56cb1ea4b195336705719f90d9775 273 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 272 46.986 T 28-03-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 AM393_RS08310 cdf56cb1ea4b195336705719f90d9775 273 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 28-03-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM393_RS08310 cdf56cb1ea4b195336705719f90d9775 273 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 249 2.2E-55 T 28-03-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 AM393_RS08310 cdf56cb1ea4b195336705719f90d9775 273 SMART SM01382 124 251 6.7E-89 T 28-03-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 AM393_RS08310 cdf56cb1ea4b195336705719f90d9775 273 Gene3D G3DSA:2.30.30.30 119 195 2.5E-31 T 28-03-2018 IPR014722 Ribosomal protein L2 domain 2 AM393_RS08310 cdf56cb1ea4b195336705719f90d9775 273 Gene3D G3DSA:2.40.50.140 1 114 3.6E-48 T 28-03-2018 AM393_RS08310 cdf56cb1ea4b195336705719f90d9775 273 SUPERFAMILY SSF50104 127 269 2.35E-59 T 28-03-2018 IPR008991 Translation protein SH3-like domain AM393_RS09925 67d9c31c59ba2707e009f6b2d79ea74d 335 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 33 89 5.1E-6 T 28-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AM393_RS09925 67d9c31c59ba2707e009f6b2d79ea74d 335 Pfam PF13602 Zinc-binding dehydrogenase 193 332 2.5E-22 T 28-03-2018 AM393_RS09925 67d9c31c59ba2707e009f6b2d79ea74d 335 SMART SM00829 14 332 1.9E-10 T 28-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AM393_RS09925 67d9c31c59ba2707e009f6b2d79ea74d 335 SUPERFAMILY SSF50129 2 144 5.19E-31 T 28-03-2018 IPR011032 GroES-like AM393_RS09925 67d9c31c59ba2707e009f6b2d79ea74d 335 SUPERFAMILY SSF51735 116 286 9.87E-36 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS09925 67d9c31c59ba2707e009f6b2d79ea74d 335 Gene3D G3DSA:3.40.50.720 139 299 5.7E-27 T 28-03-2018 AM393_RS09925 67d9c31c59ba2707e009f6b2d79ea74d 335 TIGRFAM TIGR02817 adh_fam_1: zinc-binding alcohol dehydrogenase family protein 3 335 6.0E-157 T 28-03-2018 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 GO:0008270 AM393_RS09925 67d9c31c59ba2707e009f6b2d79ea74d 335 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 148 169 - T 28-03-2018 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 AM393_RS09925 67d9c31c59ba2707e009f6b2d79ea74d 335 Gene3D G3DSA:3.90.180.10 1 138 3.1E-31 T 28-03-2018 AM393_RS18355 34f2bf01cb8b6676d8ac5af0c198b0d3 860 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 15 171 1.6E-25 T 28-03-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM393_RS18355 34f2bf01cb8b6676d8ac5af0c198b0d3 860 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 618 651 9.7E-7 T 28-03-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM393_RS18355 34f2bf01cb8b6676d8ac5af0c198b0d3 860 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 417 572 2.0E-7 T 28-03-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM393_RS18355 34f2bf01cb8b6676d8ac5af0c198b0d3 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 485 503 6.4E-52 T 28-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AM393_RS18355 34f2bf01cb8b6676d8ac5af0c198b0d3 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 127 144 6.4E-52 T 28-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AM393_RS18355 34f2bf01cb8b6676d8ac5af0c198b0d3 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 557 567 6.4E-52 T 28-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AM393_RS18355 34f2bf01cb8b6676d8ac5af0c198b0d3 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 185 198 6.4E-52 T 28-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AM393_RS18355 34f2bf01cb8b6676d8ac5af0c198b0d3 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 153 169 6.4E-52 T 28-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AM393_RS18355 34f2bf01cb8b6676d8ac5af0c198b0d3 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 215 234 6.4E-52 T 28-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AM393_RS18355 34f2bf01cb8b6676d8ac5af0c198b0d3 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 524 546 6.4E-52 T 28-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AM393_RS18355 34f2bf01cb8b6676d8ac5af0c198b0d3 860 Gene3D G3DSA:3.90.740.10 227 403 4.9E-52 T 28-03-2018 AM393_RS18355 34f2bf01cb8b6676d8ac5af0c198b0d3 860 Gene3D G3DSA:1.10.730.10 564 859 5.4E-54 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM393_RS18355 34f2bf01cb8b6676d8ac5af0c198b0d3 860 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 4 859 23.269 T 28-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AM393_RS18355 34f2bf01cb8b6676d8ac5af0c198b0d3 860 Gene3D G3DSA:3.40.50.620 31 226 1.0E-45 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM393_RS18355 34f2bf01cb8b6676d8ac5af0c198b0d3 860 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 28-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM393_RS18355 34f2bf01cb8b6676d8ac5af0c198b0d3 860 Pfam PF08264 Anticodon-binding domain of tRNA 700 821 8.0E-16 T 28-03-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 AM393_RS18355 34f2bf01cb8b6676d8ac5af0c198b0d3 860 Gene3D G3DSA:3.40.50.620 404 563 1.2E-42 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM393_RS18355 34f2bf01cb8b6676d8ac5af0c198b0d3 860 SUPERFAMILY SSF52374 416 668 9.32E-141 T 28-03-2018 AM393_RS18355 34f2bf01cb8b6676d8ac5af0c198b0d3 860 SUPERFAMILY SSF52374 5 226 9.32E-141 T 28-03-2018 AM393_RS18355 34f2bf01cb8b6676d8ac5af0c198b0d3 860 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 5 859 0.0 T 28-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AM393_RS18355 34f2bf01cb8b6676d8ac5af0c198b0d3 860 SUPERFAMILY SSF47323 662 859 1.14E-36 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM393_RS18355 34f2bf01cb8b6676d8ac5af0c198b0d3 860 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 221 403 1.5E-76 T 28-03-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 AM393_RS18355 34f2bf01cb8b6676d8ac5af0c198b0d3 860 SUPERFAMILY SSF50677 226 415 1.57E-55 T 28-03-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 AM393_RS02835 7af9b7e54b1f0bfc163870b5a0d06aef 422 PIRSF PIRSF001563 7 418 1.9E-105 T 28-03-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 AM393_RS02835 7af9b7e54b1f0bfc163870b5a0d06aef 422 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 144 159 - T 28-03-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 AM393_RS02835 7af9b7e54b1f0bfc163870b5a0d06aef 422 SUPERFAMILY SSF53244 286 413 4.27E-34 T 28-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AM393_RS02835 7af9b7e54b1f0bfc163870b5a0d06aef 422 TIGRFAM TIGR01499 folC: bifunctional protein FolC 32 413 8.2E-108 T 28-03-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 AM393_RS02835 7af9b7e54b1f0bfc163870b5a0d06aef 422 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 52 75 - T 28-03-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 AM393_RS02835 7af9b7e54b1f0bfc163870b5a0d06aef 422 Gene3D G3DSA:3.90.190.20 288 419 6.7E-30 T 28-03-2018 AM393_RS02835 7af9b7e54b1f0bfc163870b5a0d06aef 422 Pfam PF02875 Mur ligase family, glutamate ligase domain 287 353 9.6E-8 T 28-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AM393_RS02835 7af9b7e54b1f0bfc163870b5a0d06aef 422 Gene3D G3DSA:3.40.1190.10 2 287 2.7E-75 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AM393_RS02835 7af9b7e54b1f0bfc163870b5a0d06aef 422 SUPERFAMILY SSF53623 13 284 4.73E-86 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AM393_RS02835 7af9b7e54b1f0bfc163870b5a0d06aef 422 Pfam PF08245 Mur ligase middle domain 54 196 7.0E-10 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AM393_RS10735 d1aa3ebab1a5dcb809322c960c8fadb4 286 Pfam PF03631 Virulence factor BrkB 29 274 8.4E-57 T 28-03-2018 IPR017039 Virulence factor BrkB AM393_RS10735 d1aa3ebab1a5dcb809322c960c8fadb4 286 Hamap MF_00672 UPF0761 membrane protein YihY [yihY]. 17 281 23.439 T 28-03-2018 IPR023679 Uncharacterised protein family UPF0761, bacterial AM393_RS10735 d1aa3ebab1a5dcb809322c960c8fadb4 286 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 18 275 4.8E-101 T 28-03-2018 IPR017039 Virulence factor BrkB AM393_RS10735 d1aa3ebab1a5dcb809322c960c8fadb4 286 PIRSF PIRSF035875 1 286 7.9E-69 T 28-03-2018 IPR017039 Virulence factor BrkB AM393_RS13020 5cb663be983e5cc2c908c3d13f666387 577 Gene3D G3DSA:2.40.160.50 220 576 1.3E-59 T 28-03-2018 AM393_RS13020 5cb663be983e5cc2c908c3d13f666387 577 Gene3D G3DSA:3.10.20.310 102 188 5.4E-10 T 28-03-2018 AM393_RS13020 5cb663be983e5cc2c908c3d13f666387 577 Pfam PF17243 POTRA domain TamA domain 1 26 100 1.3E-21 T 28-03-2018 IPR035243 TamA, POTRA domain 1 AM393_RS13020 5cb663be983e5cc2c908c3d13f666387 577 Pfam PF01103 Surface antigen 281 574 1.4E-33 T 28-03-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 AM393_RS13020 5cb663be983e5cc2c908c3d13f666387 577 Pfam PF07244 Surface antigen variable number repeat 189 245 3.7E-9 T 28-03-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 AM393_RS09050 9598faf106fa11051fa63961dd37701d 397 SUPERFAMILY SSF51905 3 188 4.66E-59 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS09050 9598faf106fa11051fa63961dd37701d 397 SUPERFAMILY SSF51905 337 395 4.66E-59 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS09050 9598faf106fa11051fa63961dd37701d 397 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 155 164 1.4E-7 T 28-03-2018 AM393_RS09050 9598faf106fa11051fa63961dd37701d 397 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 362 369 1.4E-7 T 28-03-2018 AM393_RS09050 9598faf106fa11051fa63961dd37701d 397 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 1.4E-7 T 28-03-2018 AM393_RS09050 9598faf106fa11051fa63961dd37701d 397 SUPERFAMILY SSF160996 190 338 5.75E-43 T 28-03-2018 AM393_RS09050 9598faf106fa11051fa63961dd37701d 397 Gene3D G3DSA:1.10.8.260 270 321 4.9E-15 T 28-03-2018 IPR023166 HI0933 insert-like domain AM393_RS09050 9598faf106fa11051fa63961dd37701d 397 Pfam PF03486 HI0933-like protein 5 392 4.3E-155 T 28-03-2018 AM393_RS09050 9598faf106fa11051fa63961dd37701d 397 Gene3D G3DSA:2.40.30.10 189 269 7.2E-23 T 28-03-2018 AM393_RS09050 9598faf106fa11051fa63961dd37701d 397 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 7 392 3.9E-126 T 28-03-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like AM393_RS09050 9598faf106fa11051fa63961dd37701d 397 Gene3D G3DSA:3.50.50.60 4 188 1.2E-22 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS15115 9c03008981d00286e9c39b18312e7d97 293 Gene3D G3DSA:3.40.50.620 152 291 5.2E-24 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM393_RS15115 9c03008981d00286e9c39b18312e7d97 293 Gene3D G3DSA:3.40.50.620 1 141 1.0E-32 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM393_RS15115 9c03008981d00286e9c39b18312e7d97 293 TIGRFAM TIGR03838 queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase 6 270 4.0E-111 T 28-03-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 AM393_RS15115 9c03008981d00286e9c39b18312e7d97 293 Hamap MF_01428 Glutamyl-Q tRNA(Asp) synthetase [gluQ]. 6 290 40.368 T 28-03-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 AM393_RS15115 9c03008981d00286e9c39b18312e7d97 293 PRINTS PR00987 Glutamyl-tRNA synthetase signature 9 21 6.6E-13 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AM393_RS15115 9c03008981d00286e9c39b18312e7d97 293 PRINTS PR00987 Glutamyl-tRNA synthetase signature 38 51 6.6E-13 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AM393_RS15115 9c03008981d00286e9c39b18312e7d97 293 PRINTS PR00987 Glutamyl-tRNA synthetase signature 170 180 6.6E-13 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AM393_RS15115 9c03008981d00286e9c39b18312e7d97 293 PRINTS PR00987 Glutamyl-tRNA synthetase signature 186 194 6.6E-13 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AM393_RS15115 9c03008981d00286e9c39b18312e7d97 293 PRINTS PR00987 Glutamyl-tRNA synthetase signature 23 34 6.6E-13 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AM393_RS15115 9c03008981d00286e9c39b18312e7d97 293 SUPERFAMILY SSF52374 6 289 1.04E-86 T 28-03-2018 AM393_RS15115 9c03008981d00286e9c39b18312e7d97 293 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 9 237 1.6E-43 T 28-03-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 AM393_RS26300 be2c0c3d83d8c1b1790055e340743e1e 248 Gene3D G3DSA:3.40.50.300 1 248 1.8E-43 T 28-03-2018 AM393_RS26300 be2c0c3d83d8c1b1790055e340743e1e 248 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS26300 be2c0c3d83d8c1b1790055e340743e1e 248 SMART SM00382 26 223 1.4E-8 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS26300 be2c0c3d83d8c1b1790055e340743e1e 248 TIGRFAM TIGR01978 sufC: FeS assembly ATPase SufC 2 244 2.8E-114 T 28-03-2018 IPR010230 FeS cluster assembly SUF system, ATPase SufC GO:0005524|GO:0006810 AM393_RS26300 be2c0c3d83d8c1b1790055e340743e1e 248 SUPERFAMILY SSF52540 2 231 1.82E-42 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS26300 be2c0c3d83d8c1b1790055e340743e1e 248 Pfam PF00005 ABC transporter 17 172 1.3E-19 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS14490 cbdad1aad7750d26f8a66b51cc16d05c 542 SMART SM00387 426 537 6.4E-22 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS14490 cbdad1aad7750d26f8a66b51cc16d05c 542 SUPERFAMILY SSF55874 403 536 3.14E-27 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS14490 cbdad1aad7750d26f8a66b51cc16d05c 542 Gene3D G3DSA:3.30.450.20 37 171 5.4E-25 T 28-03-2018 AM393_RS14490 cbdad1aad7750d26f8a66b51cc16d05c 542 Gene3D G3DSA:1.10.287.130 320 384 1.8E-12 T 28-03-2018 AM393_RS14490 cbdad1aad7750d26f8a66b51cc16d05c 542 SUPERFAMILY SSF103190 45 172 2.79E-36 T 28-03-2018 IPR029151 Periplasmic sensor domain-like AM393_RS14490 cbdad1aad7750d26f8a66b51cc16d05c 542 Gene3D G3DSA:3.30.450.20 205 311 1.1E-6 T 28-03-2018 AM393_RS14490 cbdad1aad7750d26f8a66b51cc16d05c 542 PRINTS PR00344 Bacterial sensor protein C-terminal signature 485 495 1.3E-9 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM393_RS14490 cbdad1aad7750d26f8a66b51cc16d05c 542 PRINTS PR00344 Bacterial sensor protein C-terminal signature 521 534 1.3E-9 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM393_RS14490 cbdad1aad7750d26f8a66b51cc16d05c 542 PRINTS PR00344 Bacterial sensor protein C-terminal signature 497 515 1.3E-9 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM393_RS14490 cbdad1aad7750d26f8a66b51cc16d05c 542 PRINTS PR00344 Bacterial sensor protein C-terminal signature 467 481 1.3E-9 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM393_RS14490 cbdad1aad7750d26f8a66b51cc16d05c 542 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 434 536 1.2E-14 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS14490 cbdad1aad7750d26f8a66b51cc16d05c 542 Gene3D G3DSA:3.30.565.10 398 542 3.5E-28 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS14490 cbdad1aad7750d26f8a66b51cc16d05c 542 SUPERFAMILY SSF55890 330 442 3.66E-6 T 28-03-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 AM393_RS14490 cbdad1aad7750d26f8a66b51cc16d05c 542 Pfam PF17203 Single cache domain 3 44 172 5.3E-21 T 28-03-2018 IPR033463 Single cache domain 3 AM393_RS14490 cbdad1aad7750d26f8a66b51cc16d05c 542 SUPERFAMILY SSF55785 224 279 6.09E-6 T 28-03-2018 IPR000014 PAS domain AM393_RS05650 a0cd837a84af83b3bf0aa2f4f099d57e 168 Pfam PF01047 MarR family 59 115 4.8E-12 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM393_RS05650 a0cd837a84af83b3bf0aa2f4f099d57e 168 SUPERFAMILY SSF46785 16 166 9.69E-32 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS05650 a0cd837a84af83b3bf0aa2f4f099d57e 168 PRINTS PR00598 Bacterial regulatory protein MarR family signature 75 91 5.8E-12 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM393_RS05650 a0cd837a84af83b3bf0aa2f4f099d57e 168 PRINTS PR00598 Bacterial regulatory protein MarR family signature 111 127 5.8E-12 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM393_RS05650 a0cd837a84af83b3bf0aa2f4f099d57e 168 PRINTS PR00598 Bacterial regulatory protein MarR family signature 92 107 5.8E-12 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM393_RS05650 a0cd837a84af83b3bf0aa2f4f099d57e 168 PRINTS PR00598 Bacterial regulatory protein MarR family signature 141 161 5.8E-12 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM393_RS05650 a0cd837a84af83b3bf0aa2f4f099d57e 168 SMART SM00347 48 151 2.2E-20 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM393_RS05650 a0cd837a84af83b3bf0aa2f4f099d57e 168 Gene3D G3DSA:1.10.10.10 4 168 3.7E-26 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS16760 6bf69ab161f66c66a589ce07116d2a28 624 SUPERFAMILY SSF55874 4 213 7.6E-67 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS16760 6bf69ab161f66c66a589ce07116d2a28 624 Pfam PF00183 Hsp90 protein 211 623 7.8E-128 T 28-03-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 AM393_RS16760 6bf69ab161f66c66a589ce07116d2a28 624 SUPERFAMILY SSF54211 230 485 2.73E-101 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM393_RS16760 6bf69ab161f66c66a589ce07116d2a28 624 PRINTS PR00775 90kDa heat shock protein signature 93 110 3.3E-63 T 28-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal AM393_RS16760 6bf69ab161f66c66a589ce07116d2a28 624 PRINTS PR00775 90kDa heat shock protein signature 120 142 3.3E-63 T 28-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal AM393_RS16760 6bf69ab161f66c66a589ce07116d2a28 624 PRINTS PR00775 90kDa heat shock protein signature 26 48 3.3E-63 T 28-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal AM393_RS16760 6bf69ab161f66c66a589ce07116d2a28 624 PRINTS PR00775 90kDa heat shock protein signature 190 208 3.3E-63 T 28-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal AM393_RS16760 6bf69ab161f66c66a589ce07116d2a28 624 PRINTS PR00775 90kDa heat shock protein signature 172 189 3.3E-63 T 28-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal AM393_RS16760 6bf69ab161f66c66a589ce07116d2a28 624 PRINTS PR00775 90kDa heat shock protein signature 75 92 3.3E-63 T 28-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal AM393_RS16760 6bf69ab161f66c66a589ce07116d2a28 624 PRINTS PR00775 90kDa heat shock protein signature 5 25 3.3E-63 T 28-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal AM393_RS16760 6bf69ab161f66c66a589ce07116d2a28 624 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 25 34 - T 28-03-2018 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0006950|GO:0051082 AM393_RS16760 6bf69ab161f66c66a589ce07116d2a28 624 PIRSF PIRSF002583 1 624 2.9E-221 T 28-03-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 AM393_RS16760 6bf69ab161f66c66a589ce07116d2a28 624 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 27 182 2.3E-14 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS16760 6bf69ab161f66c66a589ce07116d2a28 624 SUPERFAMILY SSF110942 510 622 1.31E-35 T 28-03-2018 AM393_RS16760 6bf69ab161f66c66a589ce07116d2a28 624 SMART SM00387 27 184 4.5E-13 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS16760 6bf69ab161f66c66a589ce07116d2a28 624 Gene3D G3DSA:3.30.565.10 29 222 1.1E-53 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS16760 6bf69ab161f66c66a589ce07116d2a28 624 Hamap MF_00505 Chaperone protein HtpG [htpG]. 2 623 32.87 T 28-03-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 AM393_RS09605 dc4261bcda33d339eb4d38d595d9fc01 262 Pfam PF00535 Glycosyl transferase family 2 5 113 8.3E-16 T 28-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AM393_RS09605 dc4261bcda33d339eb4d38d595d9fc01 262 SUPERFAMILY SSF53448 2 162 2.11E-22 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM393_RS09605 dc4261bcda33d339eb4d38d595d9fc01 262 Gene3D G3DSA:3.90.550.10 3 250 9.2E-21 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM393_RS14105 a5918a0956202d7aeae7fdb6a1591b61 394 Gene3D G3DSA:3.30.9.10 313 388 1.2E-13 T 28-03-2018 AM393_RS14105 a5918a0956202d7aeae7fdb6a1591b61 394 Gene3D G3DSA:3.30.9.10 169 282 7.8E-46 T 28-03-2018 AM393_RS14105 a5918a0956202d7aeae7fdb6a1591b61 394 SUPERFAMILY SSF54373 175 275 9.42E-43 T 28-03-2018 AM393_RS14105 a5918a0956202d7aeae7fdb6a1591b61 394 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 293 309 3.9E-30 T 28-03-2018 AM393_RS14105 a5918a0956202d7aeae7fdb6a1591b61 394 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 310 328 3.9E-30 T 28-03-2018 AM393_RS14105 a5918a0956202d7aeae7fdb6a1591b61 394 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 4 26 3.9E-30 T 28-03-2018 AM393_RS14105 a5918a0956202d7aeae7fdb6a1591b61 394 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 151 166 3.9E-30 T 28-03-2018 AM393_RS14105 a5918a0956202d7aeae7fdb6a1591b61 394 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 278 293 3.9E-30 T 28-03-2018 AM393_RS14105 a5918a0956202d7aeae7fdb6a1591b61 394 TIGRFAM TIGR02360 pbenz_hydroxyl: 4-hydroxybenzoate 3-monooxygenase 1 390 4.3E-196 T 28-03-2018 IPR012733 4-hydroxybenzoate 3-monooxygenase GO:0018659|GO:0043639|GO:0050660|GO:0055114 AM393_RS14105 a5918a0956202d7aeae7fdb6a1591b61 394 SUPERFAMILY SSF51905 1 172 1.14E-54 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS14105 a5918a0956202d7aeae7fdb6a1591b61 394 SUPERFAMILY SSF51905 274 388 1.14E-54 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS14105 a5918a0956202d7aeae7fdb6a1591b61 394 Gene3D G3DSA:3.50.50.60 3 168 2.6E-14 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS14105 a5918a0956202d7aeae7fdb6a1591b61 394 Pfam PF01494 FAD binding domain 2 342 6.3E-83 T 28-03-2018 IPR002938 FAD-binding domain GO:0071949 AM393_RS16540 f4a1ebab884b2b92e782a771f8538d7f 592 SMART SM00382 366 557 1.1E-13 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS16540 f4a1ebab884b2b92e782a771f8538d7f 592 SUPERFAMILY SSF52540 336 576 1.62E-77 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS16540 f4a1ebab884b2b92e782a771f8538d7f 592 Gene3D G3DSA:1.20.1560.10 5 330 1.3E-62 T 28-03-2018 AM393_RS16540 f4a1ebab884b2b92e782a771f8538d7f 592 Pfam PF00005 ABC transporter 357 505 4.4E-29 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS16540 f4a1ebab884b2b92e782a771f8538d7f 592 SUPERFAMILY SSF90123 12 325 4.19E-70 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AM393_RS16540 f4a1ebab884b2b92e782a771f8538d7f 592 Gene3D G3DSA:3.40.50.300 331 581 1.9E-68 T 28-03-2018 AM393_RS16540 f4a1ebab884b2b92e782a771f8538d7f 592 Pfam PF00664 ABC transporter transmembrane region 27 295 3.3E-39 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AM393_RS16540 f4a1ebab884b2b92e782a771f8538d7f 592 ProSitePatterns PS00211 ABC transporters family signature. 477 491 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS24765 a7208ef3ff053b4fa946eaa5dbdb1c55 565 SMART SM00919 271 531 1.3E-132 T 28-03-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 AM393_RS24765 a7208ef3ff053b4fa946eaa5dbdb1c55 565 PIRSF PIRSF000106 2 563 3.6E-227 T 28-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AM393_RS24765 a7208ef3ff053b4fa946eaa5dbdb1c55 565 Pfam PF03949 Malic enzyme, NAD binding domain 271 530 6.1E-106 T 28-03-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 AM393_RS24765 a7208ef3ff053b4fa946eaa5dbdb1c55 565 SUPERFAMILY SSF53223 5 270 3.24E-108 T 28-03-2018 AM393_RS24765 a7208ef3ff053b4fa946eaa5dbdb1c55 565 Gene3D G3DSA:3.40.50.720 269 565 6.5E-108 T 28-03-2018 AM393_RS24765 a7208ef3ff053b4fa946eaa5dbdb1c55 565 Pfam PF00390 Malic enzyme, N-terminal domain 81 261 2.8E-78 T 28-03-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AM393_RS24765 a7208ef3ff053b4fa946eaa5dbdb1c55 565 SMART SM01274 81 261 2.3E-105 T 28-03-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AM393_RS24765 a7208ef3ff053b4fa946eaa5dbdb1c55 565 Gene3D G3DSA:3.40.50.10380 15 268 9.2E-111 T 28-03-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AM393_RS24765 a7208ef3ff053b4fa946eaa5dbdb1c55 565 SUPERFAMILY SSF51735 271 562 4.6E-97 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS24765 a7208ef3ff053b4fa946eaa5dbdb1c55 565 Hamap MF_01619 NAD-dependent malic enzyme [maeA]. 4 565 72.366 T 28-03-2018 IPR023667 NAD-dependent malic enzyme, proteobacteria GO:0004471|GO:0055114 KEGG: 00620+1.1.1.38 AM393_RS24765 a7208ef3ff053b4fa946eaa5dbdb1c55 565 ProSitePatterns PS00331 Malic enzymes signature. 267 283 - T 28-03-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 AM393_RS24765 a7208ef3ff053b4fa946eaa5dbdb1c55 565 PRINTS PR00072 Malic enzyme signature 267 283 4.9E-74 T 28-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AM393_RS24765 a7208ef3ff053b4fa946eaa5dbdb1c55 565 PRINTS PR00072 Malic enzyme signature 87 111 4.9E-74 T 28-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AM393_RS24765 a7208ef3ff053b4fa946eaa5dbdb1c55 565 PRINTS PR00072 Malic enzyme signature 183 205 4.9E-74 T 28-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AM393_RS24765 a7208ef3ff053b4fa946eaa5dbdb1c55 565 PRINTS PR00072 Malic enzyme signature 408 424 4.9E-74 T 28-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AM393_RS24765 a7208ef3ff053b4fa946eaa5dbdb1c55 565 PRINTS PR00072 Malic enzyme signature 147 176 4.9E-74 T 28-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AM393_RS24765 a7208ef3ff053b4fa946eaa5dbdb1c55 565 PRINTS PR00072 Malic enzyme signature 298 314 4.9E-74 T 28-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AM393_RS24765 a7208ef3ff053b4fa946eaa5dbdb1c55 565 PRINTS PR00072 Malic enzyme signature 242 260 4.9E-74 T 28-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AM393_RS01080 fb38559cbc25d7842cb0690a379ed861 340 PIRSF PIRSF001415 3 336 5.4E-146 T 28-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AM393_RS01080 fb38559cbc25d7842cb0690a379ed861 340 SMART SM01004 9 333 4.3E-222 T 28-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AM393_RS01080 fb38559cbc25d7842cb0690a379ed861 340 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 198 217 1.0E-55 T 28-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AM393_RS01080 fb38559cbc25d7842cb0690a379ed861 340 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 277 292 1.0E-55 T 28-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AM393_RS01080 fb38559cbc25d7842cb0690a379ed861 340 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 252 268 1.0E-55 T 28-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AM393_RS01080 fb38559cbc25d7842cb0690a379ed861 340 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 129 143 1.0E-55 T 28-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AM393_RS01080 fb38559cbc25d7842cb0690a379ed861 340 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 160 179 1.0E-55 T 28-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AM393_RS01080 fb38559cbc25d7842cb0690a379ed861 340 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 307 326 1.0E-55 T 28-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AM393_RS01080 fb38559cbc25d7842cb0690a379ed861 340 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 252 264 - T 28-03-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AM393_RS01080 fb38559cbc25d7842cb0690a379ed861 340 SUPERFAMILY SSF51569 8 335 2.93E-139 T 28-03-2018 AM393_RS01080 fb38559cbc25d7842cb0690a379ed861 340 Gene3D G3DSA:3.20.20.70 2 337 1.3E-145 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM393_RS01080 fb38559cbc25d7842cb0690a379ed861 340 Pfam PF00490 Delta-aminolevulinic acid dehydratase 12 331 7.7E-136 T 28-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AM393_RS25485 83458aee2642fa601e574532d02b4ce6 298 Gene3D G3DSA:2.40.50.100 41 120 2.2E-17 T 28-03-2018 AM393_RS25485 83458aee2642fa601e574532d02b4ce6 298 Pfam PF13437 HlyD family secretion protein 165 245 5.7E-10 T 28-03-2018 AM393_RS25485 83458aee2642fa601e574532d02b4ce6 298 Gene3D G3DSA:2.40.50.100 155 278 1.6E-5 T 28-03-2018 AM393_RS25485 83458aee2642fa601e574532d02b4ce6 298 SUPERFAMILY SSF111369 40 253 1.03E-23 T 28-03-2018 AM393_RS25485 83458aee2642fa601e574532d02b4ce6 298 Pfam PF13533 Biotin-lipoyl like 41 90 5.9E-17 T 28-03-2018 AM393_RS25485 83458aee2642fa601e574532d02b4ce6 298 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 40 253 1.8E-33 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AM393_RS27500 484dd18f39057593487c081c8e2abf37 165 Gene3D G3DSA:3.40.630.30 84 153 2.5E-14 T 28-03-2018 AM393_RS27500 484dd18f39057593487c081c8e2abf37 165 Pfam PF13420 Acetyltransferase (GNAT) domain 6 153 1.4E-15 T 28-03-2018 AM393_RS27500 484dd18f39057593487c081c8e2abf37 165 Gene3D G3DSA:3.40.630.30 1 83 1.2E-15 T 28-03-2018 AM393_RS27500 484dd18f39057593487c081c8e2abf37 165 SUPERFAMILY SSF55729 2 158 2.27E-30 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM393_RS20845 783f2a38086311812edaf4ad2a1218d6 729 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 34 - T 28-03-2018 IPR010916 TonB box, conserved site AM393_RS20845 783f2a38086311812edaf4ad2a1218d6 729 Gene3D G3DSA:2.40.170.20 150 729 4.3E-53 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM393_RS20845 783f2a38086311812edaf4ad2a1218d6 729 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 712 729 - T 28-03-2018 IPR010917 TonB-dependent receptor, conserved site AM393_RS20845 783f2a38086311812edaf4ad2a1218d6 729 SUPERFAMILY SSF56935 27 432 4.45E-95 T 28-03-2018 AM393_RS20845 783f2a38086311812edaf4ad2a1218d6 729 SUPERFAMILY SSF56935 463 729 4.45E-95 T 28-03-2018 AM393_RS20845 783f2a38086311812edaf4ad2a1218d6 729 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 42 729 9.3E-152 T 28-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AM393_RS20845 783f2a38086311812edaf4ad2a1218d6 729 Pfam PF00593 TonB dependent receptor 238 725 3.7E-28 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM393_RS20845 783f2a38086311812edaf4ad2a1218d6 729 Gene3D G3DSA:2.170.130.10 19 149 1.2E-25 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM393_RS20845 783f2a38086311812edaf4ad2a1218d6 729 Pfam PF07715 TonB-dependent Receptor Plug Domain 41 142 6.3E-19 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM393_RS19410 cd02d46ff591f79f09443b04dc68de4a 270 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 259 1.2E-57 T 28-03-2018 IPR000150 Cof family GO:0016787 AM393_RS19410 cd02d46ff591f79f09443b04dc68de4a 270 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 259 2.6E-54 T 28-03-2018 IPR023214 HAD-like domain AM393_RS19410 cd02d46ff591f79f09443b04dc68de4a 270 SUPERFAMILY SSF56784 1 263 4.34E-67 T 28-03-2018 IPR023214 HAD-like domain AM393_RS19410 cd02d46ff591f79f09443b04dc68de4a 270 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 232 7.0E-18 T 28-03-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 AM393_RS19410 cd02d46ff591f79f09443b04dc68de4a 270 ProSitePatterns PS01229 Hypothetical cof family signature 2. 213 235 - T 28-03-2018 AM393_RS19410 cd02d46ff591f79f09443b04dc68de4a 270 Gene3D G3DSA:3.40.50.1000 1 268 4.4E-36 T 28-03-2018 IPR023214 HAD-like domain AM393_RS19380 044ae0eb28c8fc2cff8d829467439866 208 Gene3D G3DSA:3.40.30.10 2 95 7.9E-28 T 28-03-2018 AM393_RS19380 044ae0eb28c8fc2cff8d829467439866 208 Gene3D G3DSA:1.20.1050.10 96 207 4.1E-29 T 28-03-2018 AM393_RS19380 044ae0eb28c8fc2cff8d829467439866 208 SUPERFAMILY SSF47616 74 204 5.15E-28 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like AM393_RS19380 044ae0eb28c8fc2cff8d829467439866 208 SUPERFAMILY SSF52833 1 85 6.6E-24 T 28-03-2018 IPR012336 Thioredoxin-like fold AM393_RS19380 044ae0eb28c8fc2cff8d829467439866 208 Pfam PF13410 Glutathione S-transferase, C-terminal domain 128 191 1.8E-8 T 28-03-2018 AM393_RS19380 044ae0eb28c8fc2cff8d829467439866 208 Pfam PF13417 Glutathione S-transferase, N-terminal domain 6 80 4.2E-15 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AM393_RS26755 dabb04849d90d1135ad78348fffed89a 866 Pfam PF01568 Molydopterin dinucleotide binding domain 570 680 7.0E-26 T 28-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 AM393_RS26755 dabb04849d90d1135ad78348fffed89a 866 Gene3D G3DSA:3.40.50.740 62 220 2.3E-43 T 28-03-2018 AM393_RS26755 dabb04849d90d1135ad78348fffed89a 866 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 6 23 - T 28-03-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 AM393_RS26755 dabb04849d90d1135ad78348fffed89a 866 PIRSF PIRSF036643 1 699 1.2E-127 T 28-03-2018 AM393_RS26755 dabb04849d90d1135ad78348fffed89a 866 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 1 52 3.1E-19 T 28-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM393_RS26755 dabb04849d90d1135ad78348fffed89a 866 Gene3D G3DSA:3.40.50.740 238 531 1.6E-73 T 28-03-2018 AM393_RS26755 dabb04849d90d1135ad78348fffed89a 866 SUPERFAMILY SSF53706 2 535 1.83E-166 T 28-03-2018 AM393_RS26755 dabb04849d90d1135ad78348fffed89a 866 Pfam PF04324 BFD-like [2Fe-2S] binding domain 812 860 3.8E-10 T 28-03-2018 IPR007419 BFD-like [2Fe-2S]-binding domain AM393_RS26755 dabb04849d90d1135ad78348fffed89a 866 SMART SM00926 1 55 3.5E-20 T 28-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM393_RS26755 dabb04849d90d1135ad78348fffed89a 866 SUPERFAMILY SSF50692 564 711 1.4E-38 T 28-03-2018 IPR009010 Aspartate decarboxylase-like domain AM393_RS26755 dabb04849d90d1135ad78348fffed89a 866 Gene3D G3DSA:2.40.40.20 532 686 1.9E-34 T 28-03-2018 AM393_RS26755 dabb04849d90d1135ad78348fffed89a 866 Pfam PF00384 Molybdopterin oxidoreductase 67 472 2.3E-79 T 28-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM393_RS26755 dabb04849d90d1135ad78348fffed89a 866 Gene3D G3DSA:2.20.25.90 1 54 1.3E-19 T 28-03-2018 AM393_RS25525 caadb7b4b0d9a03baab8af7a05531b05 215 SMART SM00479 18 203 9.0E-34 T 28-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AM393_RS25525 caadb7b4b0d9a03baab8af7a05531b05 215 Hamap MF_00157 Ribonuclease T [rnt]. 1 215 117.481 T 28-03-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 AM393_RS25525 caadb7b4b0d9a03baab8af7a05531b05 215 Pfam PF00929 Exonuclease 20 194 3.5E-38 T 28-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AM393_RS25525 caadb7b4b0d9a03baab8af7a05531b05 215 SUPERFAMILY SSF53098 12 207 7.05E-57 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM393_RS25525 caadb7b4b0d9a03baab8af7a05531b05 215 TIGRFAM TIGR01298 RNaseT: ribonuclease T 10 208 1.1E-108 T 28-03-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 AM393_RS25525 caadb7b4b0d9a03baab8af7a05531b05 215 Gene3D G3DSA:3.30.420.10 9 210 1.0E-30 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM393_RS26030 c445469198387a75ce866261c83875d4 589 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 381 577 3.6E-11 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS26030 c445469198387a75ce866261c83875d4 589 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 275 6.6E-13 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS26030 c445469198387a75ce866261c83875d4 589 SUPERFAMILY SSF161098 5 279 9.29E-48 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS26030 c445469198387a75ce866261c83875d4 589 SUPERFAMILY SSF161098 300 586 1.14E-38 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS26030 c445469198387a75ce866261c83875d4 589 Gene3D G3DSA:1.10.3720.10 302 588 7.9E-31 T 28-03-2018 AM393_RS26030 c445469198387a75ce866261c83875d4 589 Gene3D G3DSA:1.10.3720.10 13 284 6.6E-36 T 28-03-2018 AM393_RS16915 f05a63d08e1ba4f7fe6d9741396432df 288 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 260 268 - T 28-03-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 AM393_RS16915 f05a63d08e1ba4f7fe6d9741396432df 288 Gene3D G3DSA:3.40.50.10860 11 140 1.1E-50 T 28-03-2018 AM393_RS16915 f05a63d08e1ba4f7fe6d9741396432df 288 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 283 38.046 T 28-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 AM393_RS16915 f05a63d08e1ba4f7fe6d9741396432df 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 75 102 1.4E-88 T 28-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 AM393_RS16915 f05a63d08e1ba4f7fe6d9741396432df 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 155 175 1.4E-88 T 28-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 AM393_RS16915 f05a63d08e1ba4f7fe6d9741396432df 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 239 255 1.4E-88 T 28-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 AM393_RS16915 f05a63d08e1ba4f7fe6d9741396432df 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 204 233 1.4E-88 T 28-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 AM393_RS16915 f05a63d08e1ba4f7fe6d9741396432df 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 256 274 1.4E-88 T 28-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 AM393_RS16915 f05a63d08e1ba4f7fe6d9741396432df 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 34 56 1.4E-88 T 28-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 AM393_RS16915 f05a63d08e1ba4f7fe6d9741396432df 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 110 131 1.4E-88 T 28-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 AM393_RS16915 f05a63d08e1ba4f7fe6d9741396432df 288 Gene3D G3DSA:3.40.50.720 141 264 1.6E-38 T 28-03-2018 AM393_RS16915 f05a63d08e1ba4f7fe6d9741396432df 288 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 124 281 2.4E-68 T 28-03-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 AM393_RS16915 f05a63d08e1ba4f7fe6d9741396432df 288 SUPERFAMILY SSF53223 3 122 3.17E-41 T 28-03-2018 AM393_RS16915 f05a63d08e1ba4f7fe6d9741396432df 288 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 5 121 1.4E-40 T 28-03-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 AM393_RS16915 f05a63d08e1ba4f7fe6d9741396432df 288 SUPERFAMILY SSF51735 123 285 1.28E-53 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS16915 f05a63d08e1ba4f7fe6d9741396432df 288 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 76 101 - T 28-03-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 AM393_RS14355 395093a7f77b33e3386a59155ffefea1 426 Gene3D G3DSA:3.40.50.1100 101 197 3.2E-18 T 28-03-2018 AM393_RS14355 395093a7f77b33e3386a59155ffefea1 426 Gene3D G3DSA:3.90.1380.10 1 81 2.3E-17 T 28-03-2018 IPR029144 Threonine synthase, N-terminal AM393_RS14355 395093a7f77b33e3386a59155ffefea1 426 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 97 369 2.1E-23 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AM393_RS14355 395093a7f77b33e3386a59155ffefea1 426 Gene3D G3DSA:3.40.50.1100 198 319 5.0E-41 T 28-03-2018 AM393_RS14355 395093a7f77b33e3386a59155ffefea1 426 Gene3D G3DSA:3.40.50.1100 320 394 5.8E-13 T 28-03-2018 AM393_RS14355 395093a7f77b33e3386a59155ffefea1 426 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 97 111 - T 28-03-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 AM393_RS14355 395093a7f77b33e3386a59155ffefea1 426 TIGRFAM TIGR00260 thrC: threonine synthase 52 396 4.3E-124 T 28-03-2018 IPR004450 Threonine synthase-like AM393_RS14355 395093a7f77b33e3386a59155ffefea1 426 SUPERFAMILY SSF53686 1 425 2.88E-132 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AM393_RS14355 395093a7f77b33e3386a59155ffefea1 426 Pfam PF14821 Threonine synthase N terminus 8 80 1.8E-12 T 28-03-2018 IPR029144 Threonine synthase, N-terminal AM393_RS07205 1ab614071866cb5070f8f23d02d530e7 258 Pfam PF07729 FCD domain 96 219 2.4E-18 T 28-03-2018 IPR011711 GntR, C-terminal AM393_RS07205 1ab614071866cb5070f8f23d02d530e7 258 Gene3D G3DSA:1.10.10.10 1 74 2.8E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS07205 1ab614071866cb5070f8f23d02d530e7 258 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 46 62 1.2E-7 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM393_RS07205 1ab614071866cb5070f8f23d02d530e7 258 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 32 46 1.2E-7 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM393_RS07205 1ab614071866cb5070f8f23d02d530e7 258 Pfam PF00392 Bacterial regulatory proteins, gntR family 9 72 2.0E-22 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM393_RS07205 1ab614071866cb5070f8f23d02d530e7 258 SUPERFAMILY SSF46785 2 76 4.69E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS07205 1ab614071866cb5070f8f23d02d530e7 258 SMART SM00895 96 220 2.3E-16 T 28-03-2018 IPR011711 GntR, C-terminal AM393_RS07205 1ab614071866cb5070f8f23d02d530e7 258 Gene3D G3DSA:1.20.120.530 81 232 1.7E-22 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AM393_RS07205 1ab614071866cb5070f8f23d02d530e7 258 SUPERFAMILY SSF48008 94 226 5.23E-22 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AM393_RS07205 1ab614071866cb5070f8f23d02d530e7 258 SMART SM00345 13 72 1.5E-24 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM393_RS24265 3458d2af069a1102fb077c8cc59d413a 160 Gene3D G3DSA:1.20.120.20 22 152 3.0E-7 T 28-03-2018 AM393_RS24095 719facae20831a7f9d89a338827fbf40 281 TIGRFAM TIGR00259 thylakoid_BtpA: membrane complex biogenesis protein, BtpA family 20 275 3.1E-65 T 28-03-2018 IPR005137 Membrane complex biogenesis protein, BtpA family AM393_RS24095 719facae20831a7f9d89a338827fbf40 281 Gene3D G3DSA:3.20.20.380 26 281 2.3E-23 T 28-03-2018 AM393_RS24095 719facae20831a7f9d89a338827fbf40 281 SUPERFAMILY SSF51366 9 274 3.3E-30 T 28-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AM393_RS24095 719facae20831a7f9d89a338827fbf40 281 PIRSF PIRSF005956 10 280 4.6E-100 T 28-03-2018 IPR005137 Membrane complex biogenesis protein, BtpA family AM393_RS24095 719facae20831a7f9d89a338827fbf40 281 Pfam PF03437 BtpA family 19 275 1.3E-68 T 28-03-2018 IPR005137 Membrane complex biogenesis protein, BtpA family AM393_RS24095 719facae20831a7f9d89a338827fbf40 281 ProDom PD011184 BTPA I PHOTOSYSTEM BIOGENESIS ASSEMBLY SGCQ TRIPHOSPHATASE NUCLEOSIDE PAE3553 ENZYME 45 221 7.0E-66 T 28-03-2018 IPR005137 Membrane complex biogenesis protein, BtpA family AM393_RS05855 af1d45433cbae9356f11538aa80e58d3 237 ProSitePatterns PS00194 Thioredoxin family active site. 111 129 - T 28-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AM393_RS05855 af1d45433cbae9356f11538aa80e58d3 237 SUPERFAMILY SSF54423 24 81 4.58E-18 T 28-03-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal AM393_RS05855 af1d45433cbae9356f11538aa80e58d3 237 Gene3D G3DSA:3.10.450.70 19 79 6.6E-22 T 28-03-2018 AM393_RS05855 af1d45433cbae9356f11538aa80e58d3 237 Pfam PF10411 Disulfide bond isomerase protein N-terminus 27 76 6.2E-15 T 28-03-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal AM393_RS05855 af1d45433cbae9356f11538aa80e58d3 237 Gene3D G3DSA:3.40.30.10 93 237 3.9E-28 T 28-03-2018 AM393_RS05855 af1d45433cbae9356f11538aa80e58d3 237 Pfam PF13098 Thioredoxin-like domain 105 227 8.1E-28 T 28-03-2018 IPR012336 Thioredoxin-like fold AM393_RS05855 af1d45433cbae9356f11538aa80e58d3 237 SUPERFAMILY SSF52833 88 233 4.14E-41 T 28-03-2018 IPR012336 Thioredoxin-like fold AM393_RS09095 b468e9b43d338d01e5622b176ea9a282 450 SUPERFAMILY SSF55424 336 450 1.17E-36 T 28-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 AM393_RS09095 b468e9b43d338d01e5622b176ea9a282 450 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 339 449 1.0E-35 T 28-03-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AM393_RS09095 b468e9b43d338d01e5622b176ea9a282 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 255 269 5.9E-67 T 28-03-2018 AM393_RS09095 b468e9b43d338d01e5622b176ea9a282 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 298 305 5.9E-67 T 28-03-2018 AM393_RS09095 b468e9b43d338d01e5622b176ea9a282 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 335 356 5.9E-67 T 28-03-2018 AM393_RS09095 b468e9b43d338d01e5622b176ea9a282 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 135 144 5.9E-67 T 28-03-2018 AM393_RS09095 b468e9b43d338d01e5622b176ea9a282 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 424 444 5.9E-67 T 28-03-2018 AM393_RS09095 b468e9b43d338d01e5622b176ea9a282 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 169 194 5.9E-67 T 28-03-2018 AM393_RS09095 b468e9b43d338d01e5622b176ea9a282 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 402 417 5.9E-67 T 28-03-2018 AM393_RS09095 b468e9b43d338d01e5622b176ea9a282 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 5.9E-67 T 28-03-2018 AM393_RS09095 b468e9b43d338d01e5622b176ea9a282 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 5.9E-67 T 28-03-2018 AM393_RS09095 b468e9b43d338d01e5622b176ea9a282 450 TIGRFAM TIGR01421 gluta_reduc_1: glutathione-disulfide reductase 3 450 5.8E-218 T 28-03-2018 IPR006322 Glutathione reductase, eukaryote/bacterial GO:0004362|GO:0006749|GO:0050660|GO:0050661|GO:0055114 KEGG: 00480+1.8.1.7|MetaCyc: PWY-4081|Reactome: R-HSA-2408550|Reactome: R-HSA-3299685|Reactome: R-HSA-499943|Reactome: R-HSA-5628897 AM393_RS09095 b468e9b43d338d01e5622b176ea9a282 450 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 28-03-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 AM393_RS09095 b468e9b43d338d01e5622b176ea9a282 450 Gene3D G3DSA:3.40.50.720 163 331 5.1E-36 T 28-03-2018 AM393_RS09095 b468e9b43d338d01e5622b176ea9a282 450 PIRSF PIRSF000350 1 447 8.8E-85 T 28-03-2018 AM393_RS09095 b468e9b43d338d01e5622b176ea9a282 450 SUPERFAMILY SSF51905 1 365 1.06E-57 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS09095 b468e9b43d338d01e5622b176ea9a282 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 2.3E-29 T 28-03-2018 AM393_RS09095 b468e9b43d338d01e5622b176ea9a282 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 169 187 2.3E-29 T 28-03-2018 AM393_RS09095 b468e9b43d338d01e5622b176ea9a282 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 254 270 2.3E-29 T 28-03-2018 AM393_RS09095 b468e9b43d338d01e5622b176ea9a282 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 283 305 2.3E-29 T 28-03-2018 AM393_RS09095 b468e9b43d338d01e5622b176ea9a282 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 132 150 2.3E-29 T 28-03-2018 AM393_RS09095 b468e9b43d338d01e5622b176ea9a282 450 Gene3D G3DSA:3.50.50.60 1 162 3.9E-28 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS09095 b468e9b43d338d01e5622b176ea9a282 450 Gene3D G3DSA:3.30.390.30 332 450 2.3E-39 T 28-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 AM393_RS09095 b468e9b43d338d01e5622b176ea9a282 450 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 318 5.5E-68 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS11460 7f6e7213b85e07e10ed7da236ad2a667 608 Gene3D G3DSA:3.40.50.300 210 403 1.7E-49 T 28-03-2018 AM393_RS11460 7f6e7213b85e07e10ed7da236ad2a667 608 Pfam PF00570 HRDC domain 533 599 4.7E-23 T 28-03-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 AM393_RS11460 7f6e7213b85e07e10ed7da236ad2a667 608 SMART SM00956 411 514 1.8E-50 T 28-03-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 AM393_RS11460 7f6e7213b85e07e10ed7da236ad2a667 608 Pfam PF09382 RQC domain 406 514 2.5E-36 T 28-03-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 AM393_RS11460 7f6e7213b85e07e10ed7da236ad2a667 608 SMART SM00487 22 218 3.3E-30 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AM393_RS11460 7f6e7213b85e07e10ed7da236ad2a667 608 SMART SM00490 250 331 2.6E-29 T 28-03-2018 IPR001650 Helicase, C-terminal AM393_RS11460 7f6e7213b85e07e10ed7da236ad2a667 608 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 15 464 1.4E-204 T 28-03-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 AM393_RS11460 7f6e7213b85e07e10ed7da236ad2a667 608 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 13 601 1.9E-274 T 28-03-2018 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 AM393_RS11460 7f6e7213b85e07e10ed7da236ad2a667 608 Gene3D G3DSA:1.10.150.80 525 608 1.4E-25 T 28-03-2018 AM393_RS11460 7f6e7213b85e07e10ed7da236ad2a667 608 SUPERFAMILY SSF47819 530 605 2.4E-25 T 28-03-2018 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 AM393_RS11460 7f6e7213b85e07e10ed7da236ad2a667 608 SMART SM00341 529 608 2.4E-26 T 28-03-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 AM393_RS11460 7f6e7213b85e07e10ed7da236ad2a667 608 Gene3D G3DSA:1.10.10.10 404 524 4.5E-34 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS11460 7f6e7213b85e07e10ed7da236ad2a667 608 Pfam PF00271 Helicase conserved C-terminal domain 223 330 7.2E-21 T 28-03-2018 IPR001650 Helicase, C-terminal AM393_RS11460 7f6e7213b85e07e10ed7da236ad2a667 608 Pfam PF16124 RecQ zinc-binding 343 404 8.1E-15 T 28-03-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain AM393_RS11460 7f6e7213b85e07e10ed7da236ad2a667 608 Pfam PF00270 DEAD/DEAH box helicase 28 187 5.5E-20 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AM393_RS11460 7f6e7213b85e07e10ed7da236ad2a667 608 Gene3D G3DSA:3.40.50.300 1 208 2.4E-38 T 28-03-2018 AM393_RS11460 7f6e7213b85e07e10ed7da236ad2a667 608 SUPERFAMILY SSF52540 208 455 2.59E-63 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS11460 7f6e7213b85e07e10ed7da236ad2a667 608 SUPERFAMILY SSF52540 9 201 4.09E-47 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS21555 6550d9f4c8553d9d823d87ff7dcb8f38 247 Pfam PF06790 Uncharacterised protein family (UPF0259) 1 244 5.9E-97 T 28-03-2018 IPR009627 Uncharacterised protein family UPF0259 AM393_RS21555 6550d9f4c8553d9d823d87ff7dcb8f38 247 Hamap MF_01067 UPF0259 membrane protein YciC [yciC]. 1 246 22.049 T 28-03-2018 IPR009627 Uncharacterised protein family UPF0259 AM393_RS22020 e0b0584649a8d7a60a89fa3a6da4a41e 275 SMART SM00244 25 188 0.0026 T 28-03-2018 IPR001107 Band 7 domain AM393_RS22020 e0b0584649a8d7a60a89fa3a6da4a41e 275 SUPERFAMILY SSF117892 85 192 1.31E-5 T 28-03-2018 IPR001107 Band 7 domain AM393_RS22020 e0b0584649a8d7a60a89fa3a6da4a41e 275 Pfam PF01145 SPFH domain / Band 7 family 23 208 1.5E-26 T 28-03-2018 IPR001107 Band 7 domain AM393_RS03775 01a32f1f1837d87cb756303f3d745f54 301 Pfam PF07650 KH domain 209 285 1.8E-19 T 28-03-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM393_RS03775 01a32f1f1837d87cb756303f3d745f54 301 Gene3D G3DSA:3.40.50.300 26 173 1.5E-28 T 28-03-2018 AM393_RS03775 01a32f1f1837d87cb756303f3d745f54 301 Hamap MF_00367 GTPase Era [era]. 6 297 35.467 T 28-03-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS03775 01a32f1f1837d87cb756303f3d745f54 301 SUPERFAMILY SSF54814 182 297 1.96E-40 T 28-03-2018 IPR009019 K homology domain, prokaryotic type GO:0003723 AM393_RS03775 01a32f1f1837d87cb756303f3d745f54 301 SUPERFAMILY SSF52540 11 205 3.96E-44 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS03775 01a32f1f1837d87cb756303f3d745f54 301 Gene3D G3DSA:3.40.50.300 8 25 0.019 T 28-03-2018 AM393_RS03775 01a32f1f1837d87cb756303f3d745f54 301 Gene3D G3DSA:3.30.300.20 186 300 1.2E-42 T 28-03-2018 IPR015946 K homology domain-like, alpha/beta AM393_RS03775 01a32f1f1837d87cb756303f3d745f54 301 TIGRFAM TIGR00436 era: GTP-binding protein Era 9 280 2.2E-120 T 28-03-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS03775 01a32f1f1837d87cb756303f3d745f54 301 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 7 170 7.6E-43 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AM393_RS03775 01a32f1f1837d87cb756303f3d745f54 301 Pfam PF01926 50S ribosome-binding GTPase 11 125 3.3E-24 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 AM393_RS19320 84415b51ed8deda8c14f03642ba7aea4 251 SUPERFAMILY SSF69572 4 249 3.66E-87 T 28-03-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 AM393_RS19320 84415b51ed8deda8c14f03642ba7aea4 251 Gene3D G3DSA:3.40.50.720 2 250 4.9E-78 T 28-03-2018 AM393_RS19320 84415b51ed8deda8c14f03642ba7aea4 251 Pfam PF00899 ThiF family 13 245 5.5E-63 T 28-03-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 AM393_RS19320 84415b51ed8deda8c14f03642ba7aea4 251 TIGRFAM TIGR02355 moeB: molybdopterin synthase sulfurylase MoeB 9 248 7.8E-131 T 28-03-2018 IPR012730 Molybdopterin synthase sulfurylase MoeB GO:0006777 MetaCyc: PWY-6823 AM393_RS25450 f0e23ce7456a2ebf21bf0c893b157aea 218 SUPERFAMILY SSF50475 21 218 3.18E-67 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 AM393_RS25450 f0e23ce7456a2ebf21bf0c893b157aea 218 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 188 201 - T 28-03-2018 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AM393_RS25450 f0e23ce7456a2ebf21bf0c893b157aea 218 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 40 122 2.4E-24 T 28-03-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AM393_RS25450 f0e23ce7456a2ebf21bf0c893b157aea 218 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 16 218 38.549 T 28-03-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AM393_RS25450 f0e23ce7456a2ebf21bf0c893b157aea 218 PIRSF PIRSF000190 1 218 2.9E-85 T 28-03-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AM393_RS25450 f0e23ce7456a2ebf21bf0c893b157aea 218 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 178 218 1.0E-18 T 28-03-2018 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AM393_RS25450 f0e23ce7456a2ebf21bf0c893b157aea 218 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 3 218 3.1E-101 T 28-03-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AM393_RS25450 f0e23ce7456a2ebf21bf0c893b157aea 218 Gene3D G3DSA:2.30.110.10 17 218 3.9E-70 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 AM393_RS07785 17588ec480cfd1ac0f6cd04d8cedd41f 375 Pfam PF03969 AFG1-like ATPase 5 371 1.8E-160 T 28-03-2018 IPR005654 ATPase, AFG1-like GO:0005524 AM393_RS07785 17588ec480cfd1ac0f6cd04d8cedd41f 375 SUPERFAMILY SSF52540 68 209 6.03E-13 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS07785 17588ec480cfd1ac0f6cd04d8cedd41f 375 Gene3D G3DSA:3.40.50.300 21 371 3.7E-13 T 28-03-2018 AM393_RS07785 17588ec480cfd1ac0f6cd04d8cedd41f 375 Hamap MF_01919 Cell division protein ZapE [zapE]. 4 375 53.803 T 28-03-2018 IPR030870 Cell division protein ZapE GO:0016887|GO:0051301 AM393_RS25145 ed20acf55dc691a40d9462a72057b44c 249 Gene3D G3DSA:3.40.50.1820 2 248 1.3E-27 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AM393_RS25145 ed20acf55dc691a40d9462a72057b44c 249 SUPERFAMILY SSF53474 5 247 3.72E-37 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AM393_RS25145 ed20acf55dc691a40d9462a72057b44c 249 Pfam PF12697 Alpha/beta hydrolase family 25 243 3.8E-19 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM393_RS25145 ed20acf55dc691a40d9462a72057b44c 249 PRINTS PR00111 Alpha/beta hydrolase fold signature 50 65 3.1E-6 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM393_RS25145 ed20acf55dc691a40d9462a72057b44c 249 PRINTS PR00111 Alpha/beta hydrolase fold signature 95 108 3.1E-6 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM393_RS04185 7bd88276daa00154d5033142208bd343 193 Pfam PF00419 Fimbrial protein 45 192 5.4E-17 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM393_RS04185 7bd88276daa00154d5033142208bd343 193 Gene3D G3DSA:2.60.40.1090 42 193 2.0E-37 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM393_RS04185 7bd88276daa00154d5033142208bd343 193 SUPERFAMILY SSF49401 44 193 2.04E-34 T 28-03-2018 IPR008966 Adhesion domain AM393_RS03665 3e8d9e41f56309770b63c1131eb08a0e 277 Gene3D G3DSA:2.70.98.10 3 275 5.7E-34 T 28-03-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 AM393_RS03665 3e8d9e41f56309770b63c1131eb08a0e 277 SUPERFAMILY SSF74650 3 272 2.13E-38 T 28-03-2018 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 AM393_RS03665 3e8d9e41f56309770b63c1131eb08a0e 277 Pfam PF01263 Aldose 1-epimerase 7 271 7.4E-19 T 28-03-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 AM393_RS08165 abb76774aadfaeaa9b9ed8543efa0dff 431 Pfam PF01189 16S rRNA methyltransferase RsmB/F 241 426 1.1E-75 T 28-03-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AM393_RS08165 abb76774aadfaeaa9b9ed8543efa0dff 431 Gene3D G3DSA:1.10.940.10 1 145 1.4E-32 T 28-03-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 AM393_RS08165 abb76774aadfaeaa9b9ed8543efa0dff 431 SUPERFAMILY SSF48013 6 149 1.31E-35 T 28-03-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 AM393_RS08165 abb76774aadfaeaa9b9ed8543efa0dff 431 Pfam PF01029 NusB family 6 127 2.5E-25 T 28-03-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 AM393_RS08165 abb76774aadfaeaa9b9ed8543efa0dff 431 SUPERFAMILY SSF53335 141 429 2.56E-79 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM393_RS08165 abb76774aadfaeaa9b9ed8543efa0dff 431 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 8 429 6.8E-186 T 28-03-2018 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AM393_RS08165 abb76774aadfaeaa9b9ed8543efa0dff 431 Gene3D G3DSA:1.10.287.730 146 172 3.5E-14 T 28-03-2018 AM393_RS08165 abb76774aadfaeaa9b9ed8543efa0dff 431 Gene3D G3DSA:3.40.50.150 231 431 2.3E-54 T 28-03-2018 AM393_RS08165 abb76774aadfaeaa9b9ed8543efa0dff 431 Hamap MF_01856 Ribosomal RNA small subunit methyltransferase B [rsmB]. 1 429 71.857 T 28-03-2018 IPR023541 rRNA small subunit methyltransferase B, enterobacteriaceae GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AM393_RS08165 abb76774aadfaeaa9b9ed8543efa0dff 431 Gene3D G3DSA:3.30.70.1170 173 230 1.0E-16 T 28-03-2018 AM393_RS08165 abb76774aadfaeaa9b9ed8543efa0dff 431 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 316 327 - T 28-03-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AM393_RS08165 abb76774aadfaeaa9b9ed8543efa0dff 431 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 317 329 8.6E-31 T 28-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AM393_RS08165 abb76774aadfaeaa9b9ed8543efa0dff 431 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 367 383 8.6E-31 T 28-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AM393_RS08165 abb76774aadfaeaa9b9ed8543efa0dff 431 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 222 236 8.6E-31 T 28-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AM393_RS08165 abb76774aadfaeaa9b9ed8543efa0dff 431 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 251 261 8.6E-31 T 28-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AM393_RS08165 abb76774aadfaeaa9b9ed8543efa0dff 431 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 411 428 8.6E-31 T 28-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AM393_RS19700 363de20aaa82953f0a218c5a830b9c0e 377 SMART SM00382 44 227 4.4E-18 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS19700 363de20aaa82953f0a218c5a830b9c0e 377 Gene3D G3DSA:3.40.50.300 15 255 1.4E-77 T 28-03-2018 AM393_RS19700 363de20aaa82953f0a218c5a830b9c0e 377 SUPERFAMILY SSF52540 19 257 4.64E-88 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS19700 363de20aaa82953f0a218c5a830b9c0e 377 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS19700 363de20aaa82953f0a218c5a830b9c0e 377 Pfam PF00005 ABC transporter 36 177 4.5E-38 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS19700 363de20aaa82953f0a218c5a830b9c0e 377 Gene3D G3DSA:2.40.50.140 298 368 2.7E-7 T 28-03-2018 AM393_RS19700 363de20aaa82953f0a218c5a830b9c0e 377 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 50 375 3.5E-150 T 28-03-2018 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 AM393_RS19700 363de20aaa82953f0a218c5a830b9c0e 377 SUPERFAMILY SSF50331 252 375 1.19E-18 T 28-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal AM393_RS19700 363de20aaa82953f0a218c5a830b9c0e 377 Pfam PF08402 TOBE domain 295 375 1.3E-20 T 28-03-2018 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 AM393_RS03550 491ef9f9ef3f3fbd741b56b8a9576181 388 Gene3D G3DSA:3.20.20.70 30 386 4.9E-40 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM393_RS03550 491ef9f9ef3f3fbd741b56b8a9576181 388 SUPERFAMILY SSF102114 120 338 1.7E-13 T 28-03-2018 AM393_RS03550 491ef9f9ef3f3fbd741b56b8a9576181 388 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 18 373 9.4E-176 T 28-03-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AM393_RS03550 491ef9f9ef3f3fbd741b56b8a9576181 388 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 21 368 75.216 T 28-03-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AM393_RS03550 491ef9f9ef3f3fbd741b56b8a9576181 388 PIRSF PIRSF006004 15 382 1.3E-147 T 28-03-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AM393_RS03550 491ef9f9ef3f3fbd741b56b8a9576181 388 Pfam PF04055 Radical SAM superfamily 124 295 8.6E-16 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AM393_RS13735 ffa4862bb625f04b5e56e0221ada64e3 328 SUPERFAMILY SSF53822 29 326 2.59E-66 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AM393_RS13735 ffa4862bb625f04b5e56e0221ada64e3 328 Pfam PF13407 Periplasmic binding protein domain 37 288 6.4E-51 T 28-03-2018 IPR025997 Periplasmic binding protein AM393_RS13735 ffa4862bb625f04b5e56e0221ada64e3 328 Gene3D G3DSA:3.40.50.2300 28 145 1.2E-17 T 28-03-2018 AM393_RS13735 ffa4862bb625f04b5e56e0221ada64e3 328 Gene3D G3DSA:3.40.50.2300 146 302 5.8E-17 T 28-03-2018 AM393_RS06845 9e06bb4b660ee23cff49441c401c9a75 944 Gene3D G3DSA:3.30.460.10 637 810 1.3E-60 T 28-03-2018 AM393_RS06845 9e06bb4b660ee23cff49441c401c9a75 944 Gene3D G3DSA:3.30.460.10 111 283 1.3E-58 T 28-03-2018 AM393_RS06845 9e06bb4b660ee23cff49441c401c9a75 944 SUPERFAMILY SSF81593 286 435 1.49E-45 T 28-03-2018 AM393_RS06845 9e06bb4b660ee23cff49441c401c9a75 944 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 552 804 8.1E-102 T 28-03-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 AM393_RS06845 9e06bb4b660ee23cff49441c401c9a75 944 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 30 274 1.2E-96 T 28-03-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 AM393_RS06845 9e06bb4b660ee23cff49441c401c9a75 944 SUPERFAMILY SSF81593 817 942 3.92E-33 T 28-03-2018 AM393_RS06845 9e06bb4b660ee23cff49441c401c9a75 944 Gene3D G3DSA:1.20.120.330 284 439 7.4E-49 T 28-03-2018 AM393_RS06845 9e06bb4b660ee23cff49441c401c9a75 944 Gene3D G3DSA:1.20.120.330 811 944 4.2E-38 T 28-03-2018 AM393_RS06845 9e06bb4b660ee23cff49441c401c9a75 944 SUPERFAMILY SSF81301 524 814 3.6E-90 T 28-03-2018 AM393_RS06845 9e06bb4b660ee23cff49441c401c9a75 944 Hamap MF_00802 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme [glnE]. 26 944 20.013 T 28-03-2018 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme GO:0008882 AM393_RS06845 9e06bb4b660ee23cff49441c401c9a75 944 SUPERFAMILY SSF81301 27 285 2.35E-88 T 28-03-2018 AM393_RS06845 9e06bb4b660ee23cff49441c401c9a75 944 Gene3D G3DSA:1.10.4050.10 527 636 1.6E-23 T 28-03-2018 AM393_RS06845 9e06bb4b660ee23cff49441c401c9a75 944 Gene3D G3DSA:1.10.4050.10 1 109 7.4E-17 T 28-03-2018 AM393_RS06845 9e06bb4b660ee23cff49441c401c9a75 944 Pfam PF08335 GlnD PII-uridylyltransferase 824 915 8.9E-13 T 28-03-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 AM393_RS06845 9e06bb4b660ee23cff49441c401c9a75 944 Pfam PF08335 GlnD PII-uridylyltransferase 296 435 1.0E-45 T 28-03-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 AM393_RS13105 191cdb75d8ce9459eab396137a26f7d2 112 SUPERFAMILY SSF63520 20 109 1.05E-8 T 28-03-2018 IPR011608 PRD domain GO:0006355 AM393_RS13105 191cdb75d8ce9459eab396137a26f7d2 112 Gene3D G3DSA:1.10.1790.10 2 112 1.5E-11 T 28-03-2018 IPR011608 PRD domain GO:0006355 AM393_RS13105 191cdb75d8ce9459eab396137a26f7d2 112 TIGRFAM TIGR03582 EF_0829: PRD domain protein, EF_0829/AHA_3910 family 15 111 2.2E-41 T 28-03-2018 IPR020044 PRD domain protein, EF0829/AHA3910 AM393_RS07465 190c79b3b38a0924870647c455c8e05d 711 SMART SM00316 620 690 3.6E-27 T 28-03-2018 IPR022967 RNA-binding domain, S1 AM393_RS07465 190c79b3b38a0924870647c455c8e05d 711 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 241 320 6.7E-26 T 28-03-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AM393_RS07465 190c79b3b38a0924870647c455c8e05d 711 Gene3D G3DSA:3.30.230.70 13 248 1.3E-53 T 28-03-2018 IPR027408 PNPase/RNase PH domain Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AM393_RS07465 190c79b3b38a0924870647c455c8e05d 711 SUPERFAMILY SSF50249 608 692 1.28E-22 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM393_RS07465 190c79b3b38a0924870647c455c8e05d 711 Gene3D G3DSA:3.30.230.70 317 544 9.9E-57 T 28-03-2018 IPR027408 PNPase/RNase PH domain Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AM393_RS07465 190c79b3b38a0924870647c455c8e05d 711 Pfam PF00575 S1 RNA binding domain 619 690 2.8E-22 T 28-03-2018 IPR003029 S1 domain GO:0003676 AM393_RS07465 190c79b3b38a0924870647c455c8e05d 711 SMART SM00322 552 617 8.5E-13 T 28-03-2018 IPR004087 K Homology domain GO:0003676 AM393_RS07465 190c79b3b38a0924870647c455c8e05d 711 Pfam PF01138 3' exoribonuclease family, domain 1 16 144 3.6E-18 T 28-03-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AM393_RS07465 190c79b3b38a0924870647c455c8e05d 711 Pfam PF01138 3' exoribonuclease family, domain 1 324 456 2.1E-21 T 28-03-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AM393_RS07465 190c79b3b38a0924870647c455c8e05d 711 SUPERFAMILY SSF55666 145 235 8.98E-31 T 28-03-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AM393_RS07465 190c79b3b38a0924870647c455c8e05d 711 SUPERFAMILY SSF54211 301 492 4.71E-46 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM393_RS07465 190c79b3b38a0924870647c455c8e05d 711 SUPERFAMILY SSF55666 450 548 5.19E-27 T 28-03-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AM393_RS07465 190c79b3b38a0924870647c455c8e05d 711 Pfam PF00013 KH domain 556 614 3.6E-9 T 28-03-2018 IPR004088 K Homology domain, type 1 GO:0003723 AM393_RS07465 190c79b3b38a0924870647c455c8e05d 711 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 10 691 0.0 T 28-03-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AM393_RS07465 190c79b3b38a0924870647c455c8e05d 711 SUPERFAMILY SSF54791 554 622 1.2E-17 T 28-03-2018 IPR004088 K Homology domain, type 1 GO:0003723 AM393_RS07465 190c79b3b38a0924870647c455c8e05d 711 Gene3D G3DSA:2.40.50.140 617 698 2.5E-26 T 28-03-2018 AM393_RS07465 190c79b3b38a0924870647c455c8e05d 711 Gene3D G3DSA:3.30.1370.10 554 616 9.0E-14 T 28-03-2018 IPR004088 K Homology domain, type 1 GO:0003723 AM393_RS07465 190c79b3b38a0924870647c455c8e05d 711 Gene3D G3DSA:1.10.10.400 249 316 6.0E-20 T 28-03-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AM393_RS07465 190c79b3b38a0924870647c455c8e05d 711 PIRSF PIRSF005499 2 710 4.2E-301 T 28-03-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AM393_RS07465 190c79b3b38a0924870647c455c8e05d 711 SUPERFAMILY SSF46915 226 325 1.7E-25 T 28-03-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AM393_RS07465 190c79b3b38a0924870647c455c8e05d 711 SUPERFAMILY SSF54211 4 144 5.06E-50 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM393_RS07465 190c79b3b38a0924870647c455c8e05d 711 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 3 693 30.593 T 28-03-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AM393_RS07465 190c79b3b38a0924870647c455c8e05d 711 Pfam PF03725 3' exoribonuclease family, domain 2 460 527 2.2E-4 T 28-03-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AM393_RS07465 190c79b3b38a0924870647c455c8e05d 711 Pfam PF03725 3' exoribonuclease family, domain 2 147 210 3.5E-14 T 28-03-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AM393_RS15650 eddf1854fe3953de025b13dc40d88ff0 351 SUPERFAMILY SSF100879 241 349 6.28E-27 T 28-03-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AM393_RS15650 eddf1854fe3953de025b13dc40d88ff0 351 Gene3D G3DSA:3.30.1490.100 243 351 3.8E-29 T 28-03-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AM393_RS15650 eddf1854fe3953de025b13dc40d88ff0 351 Pfam PF11799 impB/mucB/samB family C-terminal domain 237 341 1.3E-9 T 28-03-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AM393_RS15650 eddf1854fe3953de025b13dc40d88ff0 351 Pfam PF11798 IMS family HHH motif 169 197 8.6E-6 T 28-03-2018 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 AM393_RS15650 eddf1854fe3953de025b13dc40d88ff0 351 Pfam PF00817 impB/mucB/samB family 7 154 1.7E-48 T 28-03-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AM393_RS15650 eddf1854fe3953de025b13dc40d88ff0 351 Gene3D G3DSA:1.10.150.20 171 242 8.2E-22 T 28-03-2018 AM393_RS15650 eddf1854fe3953de025b13dc40d88ff0 351 Gene3D G3DSA:3.30.70.270 41 113 3.8E-25 T 28-03-2018 AM393_RS15650 eddf1854fe3953de025b13dc40d88ff0 351 Gene3D G3DSA:3.30.70.270 114 170 3.0E-21 T 28-03-2018 AM393_RS15650 eddf1854fe3953de025b13dc40d88ff0 351 SUPERFAMILY SSF56672 1 234 1.33E-93 T 28-03-2018 AM393_RS15650 eddf1854fe3953de025b13dc40d88ff0 351 Hamap MF_01113 DNA polymerase IV [dinB]. 1 349 36.917 T 28-03-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 AM393_RS11770 e62ef11216d53899ca1b0eb656a67918 211 Pfam PF02581 Thiamine monophosphate synthase 20 189 5.2E-55 T 28-03-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AM393_RS11770 e62ef11216d53899ca1b0eb656a67918 211 Gene3D G3DSA:3.20.20.70 14 205 2.6E-40 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM393_RS11770 e62ef11216d53899ca1b0eb656a67918 211 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 20 202 2.1E-57 T 28-03-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AM393_RS11770 e62ef11216d53899ca1b0eb656a67918 211 SUPERFAMILY SSF51391 6 204 2.22E-63 T 28-03-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AM393_RS11770 e62ef11216d53899ca1b0eb656a67918 211 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 10 207 19.906 T 28-03-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AM393_RS14750 f1161ea83f95c06983ebbe16d203dde2 201 Pfam PF00694 Aconitase C-terminal domain 3 126 6.7E-40 T 28-03-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33 AM393_RS14750 f1161ea83f95c06983ebbe16d203dde2 201 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 2 200 45.281 T 28-03-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 AM393_RS14750 f1161ea83f95c06983ebbe16d203dde2 201 Gene3D G3DSA:3.20.19.10 1 177 2.3E-52 T 28-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AM393_RS14750 f1161ea83f95c06983ebbe16d203dde2 201 SUPERFAMILY SSF52016 3 196 7.06E-63 T 28-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AM393_RS14750 f1161ea83f95c06983ebbe16d203dde2 201 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 3 189 1.2E-100 T 28-03-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 AM393_RS18400 7181000c8bba320607cbed2d6b47f7df 292 SMART SM01091 205 283 2.4E-31 T 28-03-2018 IPR005170 Transporter-associated domain AM393_RS18400 7181000c8bba320607cbed2d6b47f7df 292 SUPERFAMILY SSF54631 66 202 4.67E-33 T 28-03-2018 AM393_RS18400 7181000c8bba320607cbed2d6b47f7df 292 Gene3D G3DSA:3.10.580.10 50 200 9.3E-36 T 28-03-2018 AM393_RS18400 7181000c8bba320607cbed2d6b47f7df 292 Pfam PF00571 CBS domain 140 189 2.9E-5 T 28-03-2018 IPR000644 CBS domain AM393_RS18400 7181000c8bba320607cbed2d6b47f7df 292 Pfam PF00571 CBS domain 69 124 6.6E-8 T 28-03-2018 IPR000644 CBS domain AM393_RS18400 7181000c8bba320607cbed2d6b47f7df 292 Pfam PF03471 Transporter associated domain 206 281 3.5E-23 T 28-03-2018 IPR005170 Transporter-associated domain AM393_RS18400 7181000c8bba320607cbed2d6b47f7df 292 SMART SM00116 78 127 4.2 T 28-03-2018 IPR000644 CBS domain AM393_RS18400 7181000c8bba320607cbed2d6b47f7df 292 SMART SM00116 141 189 1.1 T 28-03-2018 IPR000644 CBS domain AM393_RS18400 7181000c8bba320607cbed2d6b47f7df 292 Gene3D G3DSA:3.30.465.10 201 285 1.9E-27 T 28-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AM393_RS18400 7181000c8bba320607cbed2d6b47f7df 292 SUPERFAMILY SSF56176 204 289 4.64E-24 T 28-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AM393_RS19445 270b1a8da6dab1322f384e6033c042d2 292 Pfam PF07022 Bacteriophage CI repressor helix-turn-helix domain 113 177 1.7E-27 T 28-03-2018 IPR010744 Bacteriophage CI repressor GO:0003677|GO:0045892 AM393_RS19445 270b1a8da6dab1322f384e6033c042d2 292 Pfam PF07022 Bacteriophage CI repressor helix-turn-helix domain 9 70 1.9E-22 T 28-03-2018 IPR010744 Bacteriophage CI repressor GO:0003677|GO:0045892 AM393_RS19445 270b1a8da6dab1322f384e6033c042d2 292 Pfam PF16452 Bacteriophage CI repressor C-terminal domain 186 284 1.1E-28 T 28-03-2018 IPR032499 Bacteriophage CI repressor, C-terminal GO:0051259 AM393_RS19445 270b1a8da6dab1322f384e6033c042d2 292 Gene3D G3DSA:1.10.260.40 106 177 1.1E-6 T 28-03-2018 AM393_RS19445 270b1a8da6dab1322f384e6033c042d2 292 Gene3D G3DSA:1.10.260.40 1 72 1.7E-6 T 28-03-2018 AM393_RS08900 74684fa5b87ea9b14c24960b7d809d6d 284 SUPERFAMILY SSF88659 200 283 7.29E-19 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM393_RS08900 74684fa5b87ea9b14c24960b7d809d6d 284 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 14 283 2.8E-130 T 28-03-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 AM393_RS08900 74684fa5b87ea9b14c24960b7d809d6d 284 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 2 284 55.326 T 28-03-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 AM393_RS08900 74684fa5b87ea9b14c24960b7d809d6d 284 PIRSF PIRSF000770 8 284 1.1E-34 T 28-03-2018 AM393_RS08900 74684fa5b87ea9b14c24960b7d809d6d 284 Gene3D G3DSA:1.10.10.10 222 284 8.0E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS08900 74684fa5b87ea9b14c24960b7d809d6d 284 PRINTS PR00046 Major sigma-70 factor signature 77 90 4.9E-19 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM393_RS08900 74684fa5b87ea9b14c24960b7d809d6d 284 PRINTS PR00046 Major sigma-70 factor signature 232 244 4.9E-19 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM393_RS08900 74684fa5b87ea9b14c24960b7d809d6d 284 PRINTS PR00046 Major sigma-70 factor signature 267 278 4.9E-19 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM393_RS08900 74684fa5b87ea9b14c24960b7d809d6d 284 PRINTS PR00046 Major sigma-70 factor signature 252 267 4.9E-19 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM393_RS08900 74684fa5b87ea9b14c24960b7d809d6d 284 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 48 281 1.1E-34 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM393_RS08900 74684fa5b87ea9b14c24960b7d809d6d 284 Gene3D G3DSA:1.10.601.10 10 122 6.3E-34 T 28-03-2018 AM393_RS08900 74684fa5b87ea9b14c24960b7d809d6d 284 Pfam PF04542 Sigma-70 region 2 53 122 1.9E-16 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM393_RS08900 74684fa5b87ea9b14c24960b7d809d6d 284 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 252 278 - T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM393_RS08900 74684fa5b87ea9b14c24960b7d809d6d 284 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 77 90 - T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM393_RS08900 74684fa5b87ea9b14c24960b7d809d6d 284 SUPERFAMILY SSF88946 15 122 5.49E-39 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM393_RS08900 74684fa5b87ea9b14c24960b7d809d6d 284 Pfam PF04545 Sigma-70, region 4 228 280 6.6E-17 T 28-03-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM393_RS26275 238eedf13208c3d23b471043213172bf 78 Gene3D G3DSA:1.20.5.190 22 73 1.8E-16 T 28-03-2018 AM393_RS26275 238eedf13208c3d23b471043213172bf 78 Pfam PF04728 Lipoprotein leucine-zipper 26 78 9.4E-26 T 28-03-2018 IPR006817 Lipoprotein leucine-zipper GO:0019867 AM393_RS26275 238eedf13208c3d23b471043213172bf 78 SUPERFAMILY SSF58042 24 73 7.72E-23 T 28-03-2018 AM393_RS26275 238eedf13208c3d23b471043213172bf 78 PIRSF PIRSF002855 1 78 1.3E-30 T 28-03-2018 IPR016367 Murein-lipoprotein AM393_RS26010 0dacd70fb40a8bce559858c1186963b3 594 Pfam PF05199 GMC oxidoreductase 449 574 6.6E-23 T 28-03-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 AM393_RS26010 0dacd70fb40a8bce559858c1186963b3 594 SUPERFAMILY SSF51905 524 585 2.59E-52 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS26010 0dacd70fb40a8bce559858c1186963b3 594 SUPERFAMILY SSF51905 7 344 2.59E-52 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS26010 0dacd70fb40a8bce559858c1186963b3 594 Pfam PF00732 GMC oxidoreductase 234 347 4.3E-8 T 28-03-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AM393_RS26010 0dacd70fb40a8bce559858c1186963b3 594 SUPERFAMILY SSF54373 434 497 5.1E-7 T 28-03-2018 AM393_RS26010 0dacd70fb40a8bce559858c1186963b3 594 Gene3D G3DSA:3.50.50.60 5 587 6.4E-55 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS18685 2d6c327d61c23221f3a2e17ec6e8e3fa 388 Pfam PF00549 CoA-ligase 262 382 1.1E-24 T 28-03-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AM393_RS18685 2d6c327d61c23221f3a2e17ec6e8e3fa 388 SUPERFAMILY SSF56059 1 238 2.65E-82 T 28-03-2018 AM393_RS18685 2d6c327d61c23221f3a2e17ec6e8e3fa 388 Pfam PF08442 ATP-grasp domain 2 203 6.5E-84 T 28-03-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AM393_RS18685 2d6c327d61c23221f3a2e17ec6e8e3fa 388 Gene3D G3DSA:3.40.50.261 240 385 2.5E-42 T 28-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AM393_RS18685 2d6c327d61c23221f3a2e17ec6e8e3fa 388 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 1.5E-184 T 28-03-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AM393_RS18685 2d6c327d61c23221f3a2e17ec6e8e3fa 388 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 282 - T 28-03-2018 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AM393_RS18685 2d6c327d61c23221f3a2e17ec6e8e3fa 388 Gene3D G3DSA:3.30.470.20 96 239 5.3E-53 T 28-03-2018 AM393_RS18685 2d6c327d61c23221f3a2e17ec6e8e3fa 388 Gene3D G3DSA:3.30.1490.20 21 95 1.7E-25 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AM393_RS18685 2d6c327d61c23221f3a2e17ec6e8e3fa 388 PIRSF PIRSF001554 1 388 1.4E-155 T 28-03-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AM393_RS18685 2d6c327d61c23221f3a2e17ec6e8e3fa 388 SUPERFAMILY SSF52210 239 385 3.66E-53 T 28-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AM393_RS18685 2d6c327d61c23221f3a2e17ec6e8e3fa 388 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 43.553 T 28-03-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AM393_RS18335 590c9760a86c7ff608ea6a274286fde4 209 PIRSF PIRSF000709 1 184 4.9E-15 T 28-03-2018 AM393_RS18335 590c9760a86c7ff608ea6a274286fde4 209 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 5 14 - T 28-03-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 AM393_RS18335 590c9760a86c7ff608ea6a274286fde4 209 SMART SM00855 2 156 7.4E-19 T 28-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AM393_RS18335 590c9760a86c7ff608ea6a274286fde4 209 SUPERFAMILY SSF53254 1 199 3.19E-54 T 28-03-2018 IPR029033 Histidine phosphatase superfamily AM393_RS18335 590c9760a86c7ff608ea6a274286fde4 209 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 195 2.0E-52 T 28-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AM393_RS18335 590c9760a86c7ff608ea6a274286fde4 209 Gene3D G3DSA:3.40.50.1240 1 205 5.0E-51 T 28-03-2018 IPR029033 Histidine phosphatase superfamily AM393_RS18335 590c9760a86c7ff608ea6a274286fde4 209 TIGRFAM TIGR03162 ribazole_cobC: alpha-ribazole phosphatase 3 181 1.5E-55 T 28-03-2018 IPR017578 Alpha-ribazole phosphatase, CobC GO:0009236|GO:0043755 KEGG: 00860+3.1.3.73|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 AM393_RS16550 6a0a4b12c1eeff966bd592af102a70e3 423 SUPERFAMILY SSF111352 22 402 2.09E-126 T 28-03-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 AM393_RS16550 6a0a4b12c1eeff966bd592af102a70e3 423 ProSitePatterns PS01219 Ammonium transporters signature. 177 202 - T 28-03-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 AM393_RS16550 6a0a4b12c1eeff966bd592af102a70e3 423 Pfam PF00909 Ammonium Transporter Family 28 421 2.0E-126 T 28-03-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 AM393_RS16550 6a0a4b12c1eeff966bd592af102a70e3 423 TIGRFAM TIGR00836 amt: ammonium transporter 26 421 4.9E-137 T 28-03-2018 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 AM393_RS16550 6a0a4b12c1eeff966bd592af102a70e3 423 Gene3D G3DSA:1.10.3430.10 18 402 5.4E-131 T 28-03-2018 AM393_RS02565 427392648dc71e0ac3d4661ef4ec8d3b 401 SUPERFAMILY SSF51604 145 399 1.97E-56 T 28-03-2018 IPR029065 Enolase C-terminal domain-like AM393_RS02565 427392648dc71e0ac3d4661ef4ec8d3b 401 SMART SM00922 163 269 3.8E-9 T 28-03-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal AM393_RS02565 427392648dc71e0ac3d4661ef4ec8d3b 401 SUPERFAMILY SSF54826 41 158 1.03E-23 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM393_RS02565 427392648dc71e0ac3d4661ef4ec8d3b 401 Gene3D G3DSA:3.30.390.10 1 159 1.0E-48 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM393_RS02565 427392648dc71e0ac3d4661ef4ec8d3b 401 Hamap MF_01288 L-rhamnonate dehydratase [rhmD]. 1 401 79.178 T 28-03-2018 IPR023444 L-rhamnonate dehydratase GO:0050032 KEGG: 00051+4.2.1.90|MetaCyc: PWY-6713|MetaCyc: PWY-6714 AM393_RS02565 427392648dc71e0ac3d4661ef4ec8d3b 401 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 132 157 - T 28-03-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 AM393_RS02565 427392648dc71e0ac3d4661ef4ec8d3b 401 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 67 157 3.8E-8 T 28-03-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain AM393_RS02565 427392648dc71e0ac3d4661ef4ec8d3b 401 Pfam PF13378 Enolase C-terminal domain-like 180 392 4.1E-38 T 28-03-2018 IPR029065 Enolase C-terminal domain-like AM393_RS02565 427392648dc71e0ac3d4661ef4ec8d3b 401 Gene3D G3DSA:3.20.20.120 160 390 2.3E-47 T 28-03-2018 IPR029065 Enolase C-terminal domain-like AM393_RS27715 4ffdfc249c750ec37a785fa3be241b8a 731 Gene3D G3DSA:3.40.50.300 244 406 1.6E-22 T 28-03-2018 AM393_RS27715 4ffdfc249c750ec37a785fa3be241b8a 731 Gene3D G3DSA:3.40.50.300 4 243 8.3E-33 T 28-03-2018 AM393_RS27715 4ffdfc249c750ec37a785fa3be241b8a 731 SMART SM00487 20 218 1.7E-29 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AM393_RS27715 4ffdfc249c750ec37a785fa3be241b8a 731 Pfam PF00271 Helicase conserved C-terminal domain 261 362 1.6E-13 T 28-03-2018 IPR001650 Helicase, C-terminal AM393_RS27715 4ffdfc249c750ec37a785fa3be241b8a 731 Pfam PF00270 DEAD/DEAH box helicase 26 198 1.3E-27 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AM393_RS27715 4ffdfc249c750ec37a785fa3be241b8a 731 SUPERFAMILY SSF52540 33 199 8.36E-43 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS27715 4ffdfc249c750ec37a785fa3be241b8a 731 SUPERFAMILY SSF52540 231 376 8.36E-43 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS27715 4ffdfc249c750ec37a785fa3be241b8a 731 SMART SM00490 280 364 2.9E-9 T 28-03-2018 IPR001650 Helicase, C-terminal AM393_RS13265 9600c69048b09331a80bd1a300edaa18 241 SMART SM00866 97 238 1.4E-25 T 28-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AM393_RS13265 9600c69048b09331a80bd1a300edaa18 241 SMART SM00345 18 77 1.6E-18 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM393_RS13265 9600c69048b09331a80bd1a300edaa18 241 Gene3D G3DSA:3.40.1410.10 77 241 2.3E-31 T 28-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AM393_RS13265 9600c69048b09331a80bd1a300edaa18 241 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 77 4.9E-19 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM393_RS13265 9600c69048b09331a80bd1a300edaa18 241 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 37 51 1.3E-8 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM393_RS13265 9600c69048b09331a80bd1a300edaa18 241 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 51 67 1.3E-8 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM393_RS13265 9600c69048b09331a80bd1a300edaa18 241 Gene3D G3DSA:1.10.10.10 1 76 1.0E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS13265 9600c69048b09331a80bd1a300edaa18 241 Pfam PF07702 UTRA domain 104 237 2.7E-27 T 28-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AM393_RS13265 9600c69048b09331a80bd1a300edaa18 241 SUPERFAMILY SSF46785 9 93 7.76E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS13265 9600c69048b09331a80bd1a300edaa18 241 SUPERFAMILY SSF64288 65 240 1.18E-37 T 28-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AM393_RS22305 3d3eb37e539e7af95b3cb98e77852871 446 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 5 444 7.2E-131 T 28-03-2018 IPR010263 Type VI secretion protein, VC_A0114 AM393_RS22305 3d3eb37e539e7af95b3cb98e77852871 446 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 18 443 7.9E-136 T 28-03-2018 IPR010263 Type VI secretion protein, VC_A0114 AM393_RS14850 a67e3258858d624c470cada6144b7c0f 356 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 8 353 35.356 T 28-03-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AM393_RS14850 a67e3258858d624c470cada6144b7c0f 356 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 9 145 3.0E-48 T 28-03-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AM393_RS14850 a67e3258858d624c470cada6144b7c0f 356 Gene3D G3DSA:3.40.50.2000 1 176 2.2E-43 T 28-03-2018 AM393_RS14850 a67e3258858d624c470cada6144b7c0f 356 SUPERFAMILY SSF53756 6 351 1.23E-129 T 28-03-2018 AM393_RS14850 a67e3258858d624c470cada6144b7c0f 356 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 185 343 1.7E-36 T 28-03-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193 AM393_RS14850 a67e3258858d624c470cada6144b7c0f 356 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 2 348 3.6E-112 T 28-03-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AM393_RS14850 a67e3258858d624c470cada6144b7c0f 356 Gene3D G3DSA:3.40.50.2000 177 347 2.1E-31 T 28-03-2018 AM393_RS03055 dfbccb6c8825dae46adf9a474c37e469 117 Pfam PF07037 Putative transcription regulator (DUF1323) 6 116 1.2E-50 T 28-03-2018 IPR010749 Protein of unknown function DUF1323 AM393_RS03055 dfbccb6c8825dae46adf9a474c37e469 117 SUPERFAMILY SSF46955 2 54 1.01E-13 T 28-03-2018 IPR009061 Putative DNA-binding domain AM393_RS03055 dfbccb6c8825dae46adf9a474c37e469 117 ProDom PD060594 TRANSCRIPTION YFED YFEC DNA-BINDING REGULATION NEGATIVE REGULATOR STY2653 ECS3274 STY2652 6 98 3.0E-26 T 28-03-2018 IPR010749 Protein of unknown function DUF1323 AM393_RS03055 dfbccb6c8825dae46adf9a474c37e469 117 Gene3D G3DSA:1.10.10.10 3 65 4.6E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS07980 0088bae918107cc0cfb8eec504fd0e48 147 SMART SM00507 52 108 3.2E-4 T 28-03-2018 IPR003615 HNH nuclease AM393_RS07980 0088bae918107cc0cfb8eec504fd0e48 147 Pfam PF01844 HNH endonuclease 64 112 5.5E-7 T 28-03-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 AM393_RS07980 0088bae918107cc0cfb8eec504fd0e48 147 Gene3D G3DSA:3.40.1800.10 43 125 2.4E-10 T 28-03-2018 AM393_RS20115 93996320119a7316e304301085d458c1 400 Hamap MF_00570 Nicotinate phosphoribosyltransferase [pncB]. 5 395 49.968 T 28-03-2018 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 AM393_RS20115 93996320119a7316e304301085d458c1 400 SUPERFAMILY SSF51690 120 392 7.85E-87 T 28-03-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 AM393_RS20115 93996320119a7316e304301085d458c1 400 Gene3D G3DSA:3.20.140.10 1 400 3.1E-103 T 28-03-2018 AM393_RS20115 93996320119a7316e304301085d458c1 400 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 169 393 6.9E-82 T 28-03-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 AM393_RS20115 93996320119a7316e304301085d458c1 400 SUPERFAMILY SSF54675 2 138 1.06E-42 T 28-03-2018 AM393_RS20115 93996320119a7316e304301085d458c1 400 TIGRFAM TIGR01514 NAPRTase: nicotinate phosphoribosyltransferase 8 394 3.8E-174 T 28-03-2018 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 AM393_RS20115 93996320119a7316e304301085d458c1 400 PIRSF PIRSF000484 1 394 1.4E-62 T 28-03-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 AM393_RS22365 cbd0f9da7e4da2ab5049896b1f3949ed 805 Gene3D G3DSA:3.40.50.1820 131 664 1.6E-4 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AM393_RS22365 cbd0f9da7e4da2ab5049896b1f3949ed 805 Pfam PF09994 Uncharacterized alpha/beta hydrolase domain (DUF2235) 282 408 1.4E-14 T 28-03-2018 IPR018712 Domain of unknown function DUF2235 AM393_RS22365 cbd0f9da7e4da2ab5049896b1f3949ed 805 Pfam PF09994 Uncharacterized alpha/beta hydrolase domain (DUF2235) 65 263 1.1E-7 T 28-03-2018 IPR018712 Domain of unknown function DUF2235 AM393_RS17970 5f3c7b105e2a829992b10e09454b78ab 207 SUPERFAMILY SSF56214 102 205 6.45E-12 T 28-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 AM393_RS17970 5f3c7b105e2a829992b10e09454b78ab 207 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 103 205 9.1E-12 T 28-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 AM393_RS17970 5f3c7b105e2a829992b10e09454b78ab 207 PRINTS PR01399 Enterobactin synthetase component D signature 146 162 3.5E-19 T 28-03-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 AM393_RS17970 5f3c7b105e2a829992b10e09454b78ab 207 PRINTS PR01399 Enterobactin synthetase component D signature 44 64 3.5E-19 T 28-03-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 AM393_RS17970 5f3c7b105e2a829992b10e09454b78ab 207 PRINTS PR01399 Enterobactin synthetase component D signature 73 91 3.5E-19 T 28-03-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 AM393_RS17970 5f3c7b105e2a829992b10e09454b78ab 207 Gene3D G3DSA:3.90.470.20 36 113 9.4E-14 T 28-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 AM393_RS17970 5f3c7b105e2a829992b10e09454b78ab 207 Gene3D G3DSA:3.90.470.20 114 201 1.2E-6 T 28-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 AM393_RS12875 6fa6aea75956492ceedc2ba43666613a 251 SUPERFAMILY SSF100950 75 233 1.26E-22 T 28-03-2018 AM393_RS12875 6fa6aea75956492ceedc2ba43666613a 251 SMART SM00420 6 58 8.1E-21 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM393_RS12875 6fa6aea75956492ceedc2ba43666613a 251 Gene3D G3DSA:3.40.50.1360 74 238 6.9E-24 T 28-03-2018 AM393_RS12875 6fa6aea75956492ceedc2ba43666613a 251 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 28-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 AM393_RS12875 6fa6aea75956492ceedc2ba43666613a 251 Pfam PF00455 DeoR C terminal sensor domain 76 230 2.5E-36 T 28-03-2018 IPR014036 DeoR C-terminal sensor domain AM393_RS12875 6fa6aea75956492ceedc2ba43666613a 251 SUPERFAMILY SSF46785 5 60 1.09E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS12875 6fa6aea75956492ceedc2ba43666613a 251 Pfam PF08220 DeoR-like helix-turn-helix domain 6 61 2.0E-19 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM393_RS12875 6fa6aea75956492ceedc2ba43666613a 251 Gene3D G3DSA:1.10.10.10 1 73 1.4E-10 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS12875 6fa6aea75956492ceedc2ba43666613a 251 SMART SM01134 74 232 5.8E-38 T 28-03-2018 AM393_RS12875 6fa6aea75956492ceedc2ba43666613a 251 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 2.7E-5 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM393_RS12875 6fa6aea75956492ceedc2ba43666613a 251 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 2.7E-5 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM393_RS02825 2cf046c8c95317521ee5c66a4735c113 162 Pfam PF02674 Colicin V production protein 4 142 3.6E-38 T 28-03-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 AM393_RS14805 30a146a0de2122e60b35310a1992d1f7 152 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 1 139 2.0E-74 T 28-03-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 AM393_RS14805 30a146a0de2122e60b35310a1992d1f7 152 Gene3D G3DSA:2.10.260.10 81 128 2.1E-4 T 28-03-2018 AM393_RS14805 30a146a0de2122e60b35310a1992d1f7 152 Gene3D G3DSA:2.10.260.10 3 35 0.27 T 28-03-2018 AM393_RS14805 30a146a0de2122e60b35310a1992d1f7 152 SUPERFAMILY SSF89447 1 135 4.19E-45 T 28-03-2018 AM393_RS14805 30a146a0de2122e60b35310a1992d1f7 152 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 152 57.508 T 28-03-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 AM393_RS14805 30a146a0de2122e60b35310a1992d1f7 152 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 1 152 2.6E-64 T 28-03-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 AM393_RS14805 30a146a0de2122e60b35310a1992d1f7 152 Pfam PF02381 MraZ protein, putative antitoxin-like 1 75 2.4E-22 T 28-03-2018 IPR020603 MraZ domain AM393_RS14805 30a146a0de2122e60b35310a1992d1f7 152 Pfam PF02381 MraZ protein, putative antitoxin-like 77 137 1.7E-19 T 28-03-2018 IPR020603 MraZ domain AM393_RS14255 3e8155a7a62bab57c7077fc36cc278ca 460 SUPERFAMILY SSF52540 72 290 4.69E-48 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS14255 3e8155a7a62bab57c7077fc36cc278ca 460 Hamap MF_01498 DNA repair protein RadA [radA]. 22 458 43.225 T 28-03-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 AM393_RS14255 3e8155a7a62bab57c7077fc36cc278ca 460 Gene3D G3DSA:3.40.50.300 76 286 9.6E-41 T 28-03-2018 AM393_RS14255 3e8155a7a62bab57c7077fc36cc278ca 460 Pfam PF13541 Subunit ChlI of Mg-chelatase 348 433 1.5E-9 T 28-03-2018 AM393_RS14255 3e8155a7a62bab57c7077fc36cc278ca 460 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 454 9.9E-237 T 28-03-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 AM393_RS14255 3e8155a7a62bab57c7077fc36cc278ca 460 SMART SM00382 94 248 1.7E-8 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS14255 3e8155a7a62bab57c7077fc36cc278ca 460 SUPERFAMILY SSF54211 258 272 5.31E-42 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM393_RS14255 3e8155a7a62bab57c7077fc36cc278ca 460 SUPERFAMILY SSF54211 306 457 5.31E-42 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM393_RS14255 3e8155a7a62bab57c7077fc36cc278ca 460 PRINTS PR01874 DNA repair protein radA signature 127 144 1.9E-93 T 28-03-2018 AM393_RS14255 3e8155a7a62bab57c7077fc36cc278ca 460 PRINTS PR01874 DNA repair protein radA signature 216 244 1.9E-93 T 28-03-2018 AM393_RS14255 3e8155a7a62bab57c7077fc36cc278ca 460 PRINTS PR01874 DNA repair protein radA signature 325 348 1.9E-93 T 28-03-2018 AM393_RS14255 3e8155a7a62bab57c7077fc36cc278ca 460 PRINTS PR01874 DNA repair protein radA signature 177 201 1.9E-93 T 28-03-2018 AM393_RS14255 3e8155a7a62bab57c7077fc36cc278ca 460 PRINTS PR01874 DNA repair protein radA signature 11 35 1.9E-93 T 28-03-2018 AM393_RS14255 3e8155a7a62bab57c7077fc36cc278ca 460 PRINTS PR01874 DNA repair protein radA signature 86 114 1.9E-93 T 28-03-2018 AM393_RS14255 3e8155a7a62bab57c7077fc36cc278ca 460 PRINTS PR01874 DNA repair protein radA signature 251 277 1.9E-93 T 28-03-2018 AM393_RS14255 3e8155a7a62bab57c7077fc36cc278ca 460 Gene3D G3DSA:3.30.230.10 288 457 6.9E-32 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AM393_RS14255 3e8155a7a62bab57c7077fc36cc278ca 460 Pfam PF13481 AAA domain 88 225 1.8E-15 T 28-03-2018 AM393_RS01580 e656114f0f2c50e2645324988b6bd6cd 246 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 246 46.991 T 28-03-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 AM393_RS01580 e656114f0f2c50e2645324988b6bd6cd 246 TIGRFAM TIGR00317 cobS: cobalamin 5'-phosphate synthase 2 245 7.4E-68 T 28-03-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 AM393_RS01580 e656114f0f2c50e2645324988b6bd6cd 246 Pfam PF02654 Cobalamin-5-phosphate synthase 8 243 8.9E-54 T 28-03-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 AM393_RS11135 06c168e3b011e3eb32731fae9b7f6e71 283 Hamap MF_00258 Glutamate racemase [murI]. 22 274 35.505 T 28-03-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM393_RS11135 06c168e3b011e3eb32731fae9b7f6e71 283 SUPERFAMILY SSF53681 127 279 6.54E-34 T 28-03-2018 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM393_RS11135 06c168e3b011e3eb32731fae9b7f6e71 283 Pfam PF01177 Asp/Glu/Hydantoin racemase 26 235 9.6E-26 T 28-03-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM393_RS11135 06c168e3b011e3eb32731fae9b7f6e71 283 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 89 97 - T 28-03-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM393_RS11135 06c168e3b011e3eb32731fae9b7f6e71 283 SUPERFAMILY SSF53681 24 125 2.75E-31 T 28-03-2018 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM393_RS11135 06c168e3b011e3eb32731fae9b7f6e71 283 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 200 210 - T 28-03-2018 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM393_RS11135 06c168e3b011e3eb32731fae9b7f6e71 283 TIGRFAM TIGR00067 glut_race: glutamate racemase 24 269 6.6E-92 T 28-03-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM393_RS11135 06c168e3b011e3eb32731fae9b7f6e71 283 Gene3D G3DSA:3.40.50.1860 140 273 8.5E-29 T 28-03-2018 AM393_RS11135 06c168e3b011e3eb32731fae9b7f6e71 283 Gene3D G3DSA:3.40.50.1860 20 139 5.9E-27 T 28-03-2018 AM393_RS15965 8e4146a410923b57736a4b6c3b1e2e38 269 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 35 253 1.9E-62 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM393_RS15965 8e4146a410923b57736a4b6c3b1e2e38 269 SUPERFAMILY SSF53850 5 254 2.08E-71 T 28-03-2018 AM393_RS15965 8e4146a410923b57736a4b6c3b1e2e38 269 Gene3D G3DSA:3.40.190.10 23 176 2.0E-45 T 28-03-2018 AM393_RS15965 8e4146a410923b57736a4b6c3b1e2e38 269 SMART SM00079 34 254 6.8E-5 T 28-03-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 AM393_RS15965 8e4146a410923b57736a4b6c3b1e2e38 269 SMART SM00062 34 255 9.7E-74 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM393_RS15965 8e4146a410923b57736a4b6c3b1e2e38 269 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 58 71 - T 28-03-2018 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 AM393_RS15965 8e4146a410923b57736a4b6c3b1e2e38 269 Gene3D G3DSA:3.40.190.10 177 264 2.1E-12 T 28-03-2018 AM393_RS02530 285a0cb92baab98d68eba4b25ebb86d8 356 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 33 347 1.9E-76 T 28-03-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 AM393_RS02530 285a0cb92baab98d68eba4b25ebb86d8 356 Gene3D G3DSA:3.20.20.190 26 353 1.8E-65 T 28-03-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 AM393_RS02530 285a0cb92baab98d68eba4b25ebb86d8 356 SUPERFAMILY SSF51695 29 352 9.94E-94 T 28-03-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 AM393_RS07795 b8f40e831dde5bdcf8461bac268f363a 455 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 377 443 7.2E-10 T 28-03-2018 IPR001478 PDZ domain GO:0005515 AM393_RS07795 b8f40e831dde5bdcf8461bac268f363a 455 SUPERFAMILY SSF50156 385 452 3.68E-14 T 28-03-2018 IPR001478 PDZ domain GO:0005515 AM393_RS07795 b8f40e831dde5bdcf8461bac268f363a 455 Pfam PF13365 Trypsin-like peptidase domain 92 228 2.4E-30 T 28-03-2018 AM393_RS07795 b8f40e831dde5bdcf8461bac268f363a 455 Gene3D G3DSA:2.30.42.10 262 371 3.3E-27 T 28-03-2018 AM393_RS07795 b8f40e831dde5bdcf8461bac268f363a 455 Gene3D G3DSA:2.40.10.10 29 138 1.0E-31 T 28-03-2018 AM393_RS07795 b8f40e831dde5bdcf8461bac268f363a 455 SUPERFAMILY SSF50494 89 276 8.8E-63 T 28-03-2018 IPR009003 Peptidase S1, PA clan AM393_RS07795 b8f40e831dde5bdcf8461bac268f363a 455 SUPERFAMILY SSF50494 20 60 8.8E-63 T 28-03-2018 IPR009003 Peptidase S1, PA clan AM393_RS07795 b8f40e831dde5bdcf8461bac268f363a 455 Gene3D G3DSA:2.40.10.10 139 257 3.4E-39 T 28-03-2018 AM393_RS07795 b8f40e831dde5bdcf8461bac268f363a 455 Pfam PF13180 PDZ domain 289 358 3.3E-17 T 28-03-2018 IPR001478 PDZ domain GO:0005515 AM393_RS07795 b8f40e831dde5bdcf8461bac268f363a 455 PRINTS PR00834 HtrA/DegQ protease family signature 221 238 5.7E-59 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AM393_RS07795 b8f40e831dde5bdcf8461bac268f363a 455 PRINTS PR00834 HtrA/DegQ protease family signature 199 216 5.7E-59 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AM393_RS07795 b8f40e831dde5bdcf8461bac268f363a 455 PRINTS PR00834 HtrA/DegQ protease family signature 307 319 5.7E-59 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AM393_RS07795 b8f40e831dde5bdcf8461bac268f363a 455 PRINTS PR00834 HtrA/DegQ protease family signature 102 114 5.7E-59 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AM393_RS07795 b8f40e831dde5bdcf8461bac268f363a 455 PRINTS PR00834 HtrA/DegQ protease family signature 164 188 5.7E-59 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AM393_RS07795 b8f40e831dde5bdcf8461bac268f363a 455 PRINTS PR00834 HtrA/DegQ protease family signature 123 143 5.7E-59 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AM393_RS07795 b8f40e831dde5bdcf8461bac268f363a 455 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 41 453 3.7E-156 T 28-03-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 AM393_RS07795 b8f40e831dde5bdcf8461bac268f363a 455 SMART SM00228 374 447 3.9E-6 T 28-03-2018 IPR001478 PDZ domain GO:0005515 AM393_RS07795 b8f40e831dde5bdcf8461bac268f363a 455 SMART SM00228 267 349 5.4E-13 T 28-03-2018 IPR001478 PDZ domain GO:0005515 AM393_RS07795 b8f40e831dde5bdcf8461bac268f363a 455 SUPERFAMILY SSF50156 249 358 2.0E-22 T 28-03-2018 IPR001478 PDZ domain GO:0005515 AM393_RS07795 b8f40e831dde5bdcf8461bac268f363a 455 Gene3D G3DSA:2.30.42.10 373 455 2.5E-13 T 28-03-2018 AM393_RS09450 664ee7fe3e699063ce74e82ded5a0caa 513 SUPERFAMILY SSF52540 258 485 3.55E-47 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS09450 664ee7fe3e699063ce74e82ded5a0caa 513 Gene3D G3DSA:3.40.50.300 255 511 5.6E-41 T 28-03-2018 AM393_RS09450 664ee7fe3e699063ce74e82ded5a0caa 513 TIGRFAM TIGR02633 xylG: D-xylose ABC transporter, ATP-binding protein 4 502 2.1E-279 T 28-03-2018 IPR013455 ABC transporter, D-xylose, ATP-binding protein GO:0005524|GO:0015614|GO:0015753|GO:0016020 AM393_RS09450 664ee7fe3e699063ce74e82ded5a0caa 513 ProSitePatterns PS00211 ABC transporters family signature. 406 420 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS09450 664ee7fe3e699063ce74e82ded5a0caa 513 Gene3D G3DSA:3.40.50.300 2 233 8.7E-50 T 28-03-2018 AM393_RS09450 664ee7fe3e699063ce74e82ded5a0caa 513 SMART SM00382 29 219 2.4E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS09450 664ee7fe3e699063ce74e82ded5a0caa 513 SMART SM00382 286 482 1.2E-6 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS09450 664ee7fe3e699063ce74e82ded5a0caa 513 Pfam PF00005 ABC transporter 278 433 1.2E-19 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS09450 664ee7fe3e699063ce74e82ded5a0caa 513 Pfam PF00005 ABC transporter 20 171 3.4E-30 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS09450 664ee7fe3e699063ce74e82ded5a0caa 513 SUPERFAMILY SSF52540 3 228 2.78E-54 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS21660 03cf4e1b61b2c4a27e9b10249b49ca0f 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 1.6E-19 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS21660 03cf4e1b61b2c4a27e9b10249b49ca0f 298 Pfam PF03466 LysR substrate binding domain 93 287 9.3E-41 T 28-03-2018 IPR005119 LysR, substrate-binding AM393_RS21660 03cf4e1b61b2c4a27e9b10249b49ca0f 298 Gene3D G3DSA:3.40.190.10 175 261 1.3E-21 T 28-03-2018 AM393_RS21660 03cf4e1b61b2c4a27e9b10249b49ca0f 298 SUPERFAMILY SSF46785 2 85 2.72E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS21660 03cf4e1b61b2c4a27e9b10249b49ca0f 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 9.6E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS21660 03cf4e1b61b2c4a27e9b10249b49ca0f 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 9.6E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS21660 03cf4e1b61b2c4a27e9b10249b49ca0f 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 9.6E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS21660 03cf4e1b61b2c4a27e9b10249b49ca0f 298 SUPERFAMILY SSF53850 93 290 1.86E-41 T 28-03-2018 AM393_RS21660 03cf4e1b61b2c4a27e9b10249b49ca0f 298 Gene3D G3DSA:3.40.190.10 92 174 6.0E-17 T 28-03-2018 AM393_RS21660 03cf4e1b61b2c4a27e9b10249b49ca0f 298 Gene3D G3DSA:1.10.10.10 4 86 4.4E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS11085 9469ec734435485ea1dd95ab83e863e8 258 Gene3D G3DSA:3.40.1160.10 1 258 6.7E-47 T 28-03-2018 AM393_RS11085 9469ec734435485ea1dd95ab83e863e8 258 PIRSF PIRSF000728 1 258 4.6E-74 T 28-03-2018 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AM393_RS11085 9469ec734435485ea1dd95ab83e863e8 258 Hamap MF_00082_B Acetylglutamate kinase [argB]. 1 258 27.445 T 28-03-2018 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AM393_RS11085 9469ec734435485ea1dd95ab83e863e8 258 TIGRFAM TIGR00761 argB: acetylglutamate kinase 5 234 5.0E-76 T 28-03-2018 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AM393_RS11085 9469ec734435485ea1dd95ab83e863e8 258 SUPERFAMILY SSF53633 1 256 6.02E-62 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase AM393_RS11085 9469ec734435485ea1dd95ab83e863e8 258 Pfam PF00696 Amino acid kinase family 5 235 3.4E-40 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase AM393_RS20825 ddd49b3186e1bc8861e71c6156915781 180 Pfam PF05728 Uncharacterised protein family (UPF0227) 1 177 2.5E-70 T 28-03-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA AM393_RS20825 ddd49b3186e1bc8861e71c6156915781 180 Hamap MF_01047 UPF0227 protein YcfP [ycfP]. 1 178 54.599 T 28-03-2018 IPR022987 Uncharacterised protein family UPF0227 AM393_RS20825 ddd49b3186e1bc8861e71c6156915781 180 SUPERFAMILY SSF53474 2 176 1.27E-8 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AM393_RS09215 fe9a749c0b4f9a7ed0ced3810cda471c 333 SUPERFAMILY SSF48208 22 329 7.14E-84 T 28-03-2018 IPR008928 Six-hairpin glycosidase-like GO:0003824 AM393_RS09215 fe9a749c0b4f9a7ed0ced3810cda471c 333 Gene3D G3DSA:1.50.10.10 20 332 3.1E-75 T 28-03-2018 AM393_RS09215 fe9a749c0b4f9a7ed0ced3810cda471c 333 ProSitePatterns PS00812 Glycosyl hydrolases family 8 signature. 108 126 - T 28-03-2018 IPR019834 Glycoside hydrolase, family 8, conserved site KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 AM393_RS09215 fe9a749c0b4f9a7ed0ced3810cda471c 333 PRINTS PR00735 Glycosyl hydrolase family 8 signature 50 63 1.6E-27 T 28-03-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 AM393_RS09215 fe9a749c0b4f9a7ed0ced3810cda471c 333 PRINTS PR00735 Glycosyl hydrolase family 8 signature 212 223 1.6E-27 T 28-03-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 AM393_RS09215 fe9a749c0b4f9a7ed0ced3810cda471c 333 PRINTS PR00735 Glycosyl hydrolase family 8 signature 316 330 1.6E-27 T 28-03-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 AM393_RS09215 fe9a749c0b4f9a7ed0ced3810cda471c 333 PRINTS PR00735 Glycosyl hydrolase family 8 signature 108 126 1.6E-27 T 28-03-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 AM393_RS09215 fe9a749c0b4f9a7ed0ced3810cda471c 333 PRINTS PR00735 Glycosyl hydrolase family 8 signature 237 246 1.6E-27 T 28-03-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 AM393_RS09215 fe9a749c0b4f9a7ed0ced3810cda471c 333 PRINTS PR00735 Glycosyl hydrolase family 8 signature 172 189 1.6E-27 T 28-03-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 AM393_RS09215 fe9a749c0b4f9a7ed0ced3810cda471c 333 Pfam PF01270 Glycosyl hydrolases family 8 12 330 1.1E-102 T 28-03-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 AM393_RS26015 9a8616c66b5b02d275970dea521ae045 250 Pfam PF13618 Gluconate 2-dehydrogenase subunit 3 69 223 2.2E-37 T 28-03-2018 IPR027056 Gluconate 2-dehydrogenase subunit 3 KEGG: 00030+1.1.99.3|MetaCyc: PWY-7165 AM393_RS11810 4e06a431a242431568092d97184ff5df 231 Pfam PF08139 Prokaryotic membrane lipoprotein lipid attachment site 6 33 2.0E-6 T 28-03-2018 IPR012640 Membrane lipoprotein, lipid attachment site AM393_RS11810 4e06a431a242431568092d97184ff5df 231 Pfam PF07356 Protein of unknown function (DUF1481) 42 227 7.3E-69 T 28-03-2018 IPR010858 Protein of unknown function DUF1481 AM393_RS04565 53d2595fed4d0014f0da747710083501 608 Pfam PF00361 Proton-conducting membrane transporter 150 405 4.4E-37 T 28-03-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM393_RS04565 53d2595fed4d0014f0da747710083501 608 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 224 248 1.1E-5 T 28-03-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM393_RS04565 53d2595fed4d0014f0da747710083501 608 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 374 400 1.1E-5 T 28-03-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM393_RS13195 728f2147de010a814e88e2359c0c8a35 551 Gene3D G3DSA:2.60.40.1180 476 551 2.3E-19 T 28-03-2018 AM393_RS13195 728f2147de010a814e88e2359c0c8a35 551 SUPERFAMILY SSF51011 475 549 2.88E-17 T 28-03-2018 AM393_RS13195 728f2147de010a814e88e2359c0c8a35 551 SUPERFAMILY SSF51445 5 472 2.55E-153 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily AM393_RS13195 728f2147de010a814e88e2359c0c8a35 551 Gene3D G3DSA:3.20.20.80 338 475 1.0E-22 T 28-03-2018 AM393_RS13195 728f2147de010a814e88e2359c0c8a35 551 Pfam PF00128 Alpha amylase, catalytic domain 30 372 3.6E-125 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AM393_RS13195 728f2147de010a814e88e2359c0c8a35 551 Gene3D G3DSA:3.20.20.470 169 337 2.1E-36 T 28-03-2018 AM393_RS13195 728f2147de010a814e88e2359c0c8a35 551 Pfam PF11941 Domain of unknown function (DUF3459) 459 548 9.9E-10 T 28-03-2018 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) AM393_RS13195 728f2147de010a814e88e2359c0c8a35 551 Gene3D G3DSA:3.20.20.470 1 97 1.5E-37 T 28-03-2018 AM393_RS13195 728f2147de010a814e88e2359c0c8a35 551 Gene3D G3DSA:3.90.400.10 105 168 5.3E-27 T 28-03-2018 AM393_RS13195 728f2147de010a814e88e2359c0c8a35 551 SMART SM00642 15 414 1.3E-155 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AM393_RS13195 728f2147de010a814e88e2359c0c8a35 551 TIGRFAM TIGR02403 trehalose_treC: alpha,alpha-phosphotrehalase 7 549 3.2E-255 T 28-03-2018 IPR012769 Trehalose-6-phosphate hydrolase GO:0005737|GO:0005993|GO:0008788 KEGG: 00500+3.2.1.93 AM393_RS23145 4a62d6802a867a22c1ede4a27bdbb506 280 TIGRFAM TIGR03132 malonate_mdcB: triphosphoribosyl-dephospho-CoA synthase MdcB 16 278 5.7E-93 T 28-03-2018 IPR017555 Triphosphoribosyl-dephospho-CoA synthase GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 AM393_RS23145 4a62d6802a867a22c1ede4a27bdbb506 280 Hamap MF_01883 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase [mdcB]. 1 280 147.89 T 28-03-2018 IPR017555 Triphosphoribosyl-dephospho-CoA synthase GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 AM393_RS23145 4a62d6802a867a22c1ede4a27bdbb506 280 Pfam PF01874 ATP:dephospho-CoA triphosphoribosyl transferase 17 276 4.2E-68 T 28-03-2018 IPR002736 Triphosphoribosyl-dephospho-CoA protein GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 AM393_RS18195 3afb93ac9e7d19a3c2e92c04e8b76e00 229 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 2 13 5.4E-6 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM393_RS18195 3afb93ac9e7d19a3c2e92c04e8b76e00 229 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 114 127 5.4E-6 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM393_RS18195 3afb93ac9e7d19a3c2e92c04e8b76e00 229 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 164 184 5.4E-6 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM393_RS18195 3afb93ac9e7d19a3c2e92c04e8b76e00 229 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 191 204 5.4E-6 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM393_RS18195 3afb93ac9e7d19a3c2e92c04e8b76e00 229 TIGRFAM TIGR01691 enolase-ppase: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 2 222 4.8E-101 T 28-03-2018 IPR023943 Enolase-phosphatase E1 GO:0000287|GO:0019509|GO:0043874 KEGG: 00270+3.1.3.77|Reactome: R-HSA-1237112 AM393_RS18195 3afb93ac9e7d19a3c2e92c04e8b76e00 229 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 116 196 4.9E-6 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM393_RS18195 3afb93ac9e7d19a3c2e92c04e8b76e00 229 SUPERFAMILY SSF56784 1 222 5.21E-60 T 28-03-2018 IPR023214 HAD-like domain AM393_RS18195 3afb93ac9e7d19a3c2e92c04e8b76e00 229 Gene3D G3DSA:3.40.50.1000 2 225 2.1E-17 T 28-03-2018 IPR023214 HAD-like domain AM393_RS18195 3afb93ac9e7d19a3c2e92c04e8b76e00 229 Hamap MF_01681 Enolase-phosphatase E1 [mtnC]. 1 222 41.641 T 28-03-2018 IPR023943 Enolase-phosphatase E1 GO:0000287|GO:0019509|GO:0043874 KEGG: 00270+3.1.3.77|Reactome: R-HSA-1237112 AM393_RS18195 3afb93ac9e7d19a3c2e92c04e8b76e00 229 Pfam PF00702 haloacid dehalogenase-like hydrolase 2 196 3.5E-7 T 28-03-2018 AM393_RS14915 34536e5d8f22a538b94c9e8b008bbf8c 347 Hamap MF_00596 GMP reductase [guaC]. 1 345 55.874 T 28-03-2018 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 AM393_RS14915 34536e5d8f22a538b94c9e8b008bbf8c 347 SMART SM01240 7 344 1.5E-141 T 28-03-2018 AM393_RS14915 34536e5d8f22a538b94c9e8b008bbf8c 347 SUPERFAMILY SSF51412 6 336 8.11E-101 T 28-03-2018 AM393_RS14915 34536e5d8f22a538b94c9e8b008bbf8c 347 Gene3D G3DSA:3.20.20.70 8 341 3.6E-83 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM393_RS14915 34536e5d8f22a538b94c9e8b008bbf8c 347 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 176 188 - T 28-03-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 AM393_RS14915 34536e5d8f22a538b94c9e8b008bbf8c 347 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 9 338 2.0E-80 T 28-03-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 AM393_RS14915 34536e5d8f22a538b94c9e8b008bbf8c 347 TIGRFAM TIGR01305 GMP_reduct_1: guanosine monophosphate reductase 2 344 5.7E-206 T 28-03-2018 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 AM393_RS14915 34536e5d8f22a538b94c9e8b008bbf8c 347 PIRSF PIRSF000235 1 347 1.1E-197 T 28-03-2018 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 AM393_RS04985 d5e2f1a9819466c9aad72dba61ce7c69 313 Pfam PF13379 NMT1-like family 24 248 7.4E-17 T 28-03-2018 AM393_RS04985 d5e2f1a9819466c9aad72dba61ce7c69 313 SMART SM00062 27 247 5.5E-20 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM393_RS04985 d5e2f1a9819466c9aad72dba61ce7c69 313 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 28 308 8.5E-70 T 28-03-2018 IPR010067 Aliphatic sulfonates-binding protein GO:0016020|GO:0042626 AM393_RS04985 d5e2f1a9819466c9aad72dba61ce7c69 313 Gene3D G3DSA:3.40.190.10 22 128 3.3E-14 T 28-03-2018 AM393_RS04985 d5e2f1a9819466c9aad72dba61ce7c69 313 Gene3D G3DSA:3.40.190.10 129 308 1.7E-36 T 28-03-2018 AM393_RS04985 d5e2f1a9819466c9aad72dba61ce7c69 313 SUPERFAMILY SSF53850 25 256 1.06E-50 T 28-03-2018 AM393_RS18070 0b9d6b6bb28595526414f8c03d831c60 247 SUPERFAMILY SSF51735 1 246 2.58E-77 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS18070 0b9d6b6bb28595526414f8c03d831c60 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 9.2E-12 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS18070 0b9d6b6bb28595526414f8c03d831c60 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 9.2E-12 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS18070 0b9d6b6bb28595526414f8c03d831c60 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 9.2E-12 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS18070 0b9d6b6bb28595526414f8c03d831c60 247 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 246 3.8E-60 T 28-03-2018 AM393_RS18070 0b9d6b6bb28595526414f8c03d831c60 247 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 187 0.0025 T 28-03-2018 AM393_RS18070 0b9d6b6bb28595526414f8c03d831c60 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 6.3E-39 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS18070 0b9d6b6bb28595526414f8c03d831c60 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 6.3E-39 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS18070 0b9d6b6bb28595526414f8c03d831c60 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 6.3E-39 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS18070 0b9d6b6bb28595526414f8c03d831c60 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 6.3E-39 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS18070 0b9d6b6bb28595526414f8c03d831c60 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 6.3E-39 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS18070 0b9d6b6bb28595526414f8c03d831c60 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 6.3E-39 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS18070 0b9d6b6bb28595526414f8c03d831c60 247 Gene3D G3DSA:3.40.50.720 1 40 7.1E-10 T 28-03-2018 AM393_RS18070 0b9d6b6bb28595526414f8c03d831c60 247 Gene3D G3DSA:3.40.50.720 41 247 4.8E-62 T 28-03-2018 AM393_RS03390 3a6c55d627854b36a9463bafffebee1d 210 Gene3D G3DSA:3.30.70.260 30 109 1.3E-10 T 28-03-2018 AM393_RS03390 3a6c55d627854b36a9463bafffebee1d 210 SUPERFAMILY SSF55021 113 200 1.99E-15 T 28-03-2018 AM393_RS03390 3a6c55d627854b36a9463bafffebee1d 210 Pfam PF13740 ACT domain 29 104 1.2E-24 T 28-03-2018 AM393_RS03390 3a6c55d627854b36a9463bafffebee1d 210 SUPERFAMILY SSF55021 28 108 1.79E-16 T 28-03-2018 AM393_RS03390 3a6c55d627854b36a9463bafffebee1d 210 PIRSF PIRSF028103 27 201 1.1E-63 T 28-03-2018 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 AM393_RS03390 3a6c55d627854b36a9463bafffebee1d 210 Gene3D G3DSA:3.30.70.260 115 202 5.0E-13 T 28-03-2018 AM393_RS07310 d88ab803fa41af1259a9f4f5ed319c1a 279 SUPERFAMILY SSF46785 10 64 2.0E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS07310 d88ab803fa41af1259a9f4f5ed319c1a 279 Gene3D G3DSA:3.40.50.1360 81 245 1.4E-14 T 28-03-2018 AM393_RS07310 d88ab803fa41af1259a9f4f5ed319c1a 279 Pfam PF08220 DeoR-like helix-turn-helix domain 11 64 3.4E-15 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM393_RS07310 d88ab803fa41af1259a9f4f5ed319c1a 279 Gene3D G3DSA:1.10.10.10 3 68 6.5E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS07310 d88ab803fa41af1259a9f4f5ed319c1a 279 Pfam PF00455 DeoR C terminal sensor domain 88 238 4.0E-18 T 28-03-2018 IPR014036 DeoR C-terminal sensor domain AM393_RS07310 d88ab803fa41af1259a9f4f5ed319c1a 279 SMART SM00420 11 63 4.1E-15 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM393_RS07310 d88ab803fa41af1259a9f4f5ed319c1a 279 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 29 43 8.4E-6 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM393_RS07310 d88ab803fa41af1259a9f4f5ed319c1a 279 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 43 61 8.4E-6 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM393_RS07310 d88ab803fa41af1259a9f4f5ed319c1a 279 SUPERFAMILY SSF100950 88 241 4.5E-8 T 28-03-2018 AM393_RS07310 d88ab803fa41af1259a9f4f5ed319c1a 279 ProSitePatterns PS00894 DeoR-type HTH domain signature. 11 45 - T 28-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 AM393_RS07310 d88ab803fa41af1259a9f4f5ed319c1a 279 SMART SM01134 80 241 2.4E-23 T 28-03-2018 AM393_RS03395 f748c92fd37499f946292e48ca1987d6 156 Pfam PF00578 AhpC/TSA family 7 134 7.6E-39 T 28-03-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AM393_RS03395 f748c92fd37499f946292e48ca1987d6 156 SUPERFAMILY SSF52833 3 154 2.15E-50 T 28-03-2018 IPR012336 Thioredoxin-like fold AM393_RS03395 f748c92fd37499f946292e48ca1987d6 156 Gene3D G3DSA:3.40.30.10 1 154 1.8E-42 T 28-03-2018 AM393_RS03395 f748c92fd37499f946292e48ca1987d6 156 PIRSF PIRSF000239 1 153 6.7E-18 T 28-03-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AM393_RS28755 e57ce4192201c385d7d3315f70834d4f 251 Gene3D G3DSA:1.10.10.10 156 250 5.5E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS28755 e57ce4192201c385d7d3315f70834d4f 251 SUPERFAMILY SSF46785 144 243 4.49E-27 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS28755 e57ce4192201c385d7d3315f70834d4f 251 SUPERFAMILY SSF46785 17 143 1.56E-30 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS28755 e57ce4192201c385d7d3315f70834d4f 251 Gene3D G3DSA:1.10.10.10 1 155 4.3E-36 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS28755 e57ce4192201c385d7d3315f70834d4f 251 Pfam PF01051 Initiator Replication protein 16 242 8.3E-48 T 28-03-2018 IPR000525 Initiator Rep protein GO:0003887|GO:0005727|GO:0006270 AM393_RS00960 f431ddebba5c9a5b13af9883a86ddba8 164 TIGRFAM TIGR00632 vsr: DNA mismatch endonuclease Vsr 1 118 5.7E-47 T 28-03-2018 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 AM393_RS00960 f431ddebba5c9a5b13af9883a86ddba8 164 Pfam PF03852 DNA mismatch endonuclease Vsr 2 74 3.2E-34 T 28-03-2018 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 AM393_RS00960 f431ddebba5c9a5b13af9883a86ddba8 164 PIRSF PIRSF018267 1 151 2.8E-47 T 28-03-2018 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 AM393_RS00960 f431ddebba5c9a5b13af9883a86ddba8 164 Gene3D G3DSA:3.40.960.10 21 156 2.3E-32 T 28-03-2018 AM393_RS00960 f431ddebba5c9a5b13af9883a86ddba8 164 SUPERFAMILY SSF52980 2 153 9.65E-51 T 28-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AM393_RS19780 6c3c5422a99af9b0c9d80e3e7e2f08eb 337 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 221 1.4E-24 T 28-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 AM393_RS19780 6c3c5422a99af9b0c9d80e3e7e2f08eb 337 SUPERFAMILY SSF51735 298 335 1.12E-57 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS19780 6c3c5422a99af9b0c9d80e3e7e2f08eb 337 SUPERFAMILY SSF51735 1 270 1.12E-57 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS19780 6c3c5422a99af9b0c9d80e3e7e2f08eb 337 Gene3D G3DSA:3.90.25.10 181 337 2.6E-24 T 28-03-2018 AM393_RS19780 6c3c5422a99af9b0c9d80e3e7e2f08eb 337 Gene3D G3DSA:3.40.50.720 1 180 3.4E-26 T 28-03-2018 AM393_RS03770 2084b181a960a08955efe6ce0d762f99 245 Pfam PF02565 Recombination protein O C terminal 83 226 5.7E-23 T 28-03-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 AM393_RS03770 2084b181a960a08955efe6ce0d762f99 245 Pfam PF11967 Recombination protein O N terminal 5 76 1.2E-22 T 28-03-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal AM393_RS03770 2084b181a960a08955efe6ce0d762f99 245 Gene3D G3DSA:2.40.50.140 2 76 5.2E-25 T 28-03-2018 AM393_RS03770 2084b181a960a08955efe6ce0d762f99 245 SUPERFAMILY SSF57863 86 168 9.68E-9 T 28-03-2018 AM393_RS03770 2084b181a960a08955efe6ce0d762f99 245 TIGRFAM TIGR00613 reco: DNA repair protein RecO 5 230 1.7E-38 T 28-03-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 AM393_RS03770 2084b181a960a08955efe6ce0d762f99 245 SUPERFAMILY SSF50249 5 75 2.57E-14 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM393_RS03770 2084b181a960a08955efe6ce0d762f99 245 Hamap MF_00201 DNA repair protein RecO [recO]. 1 231 23.126 T 28-03-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 AM393_RS07410 8706d1df804079ce0e890421cb31db28 147 Hamap MF_00764 UPF0306 protein YhbP [yhbP]. 3 140 34.198 T 28-03-2018 IPR011194 Uncharacterised protein family UPF0306 AM393_RS07410 8706d1df804079ce0e890421cb31db28 147 SUPERFAMILY SSF50475 3 140 8.76E-17 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 AM393_RS07410 8706d1df804079ce0e890421cb31db28 147 Gene3D G3DSA:2.30.110.10 1 145 1.1E-14 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 AM393_RS07410 8706d1df804079ce0e890421cb31db28 147 PIRSF PIRSF009554 1 145 1.2E-58 T 28-03-2018 IPR011194 Uncharacterised protein family UPF0306 AM393_RS04290 96473db6fbfa6973c4e2c5fd908856d7 400 Gene3D G3DSA:3.10.580.10 265 396 1.5E-12 T 28-03-2018 AM393_RS04290 96473db6fbfa6973c4e2c5fd908856d7 400 Pfam PF00005 ABC transporter 45 192 3.6E-33 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS04290 96473db6fbfa6973c4e2c5fd908856d7 400 SUPERFAMILY SSF52540 43 270 1.13E-76 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS04290 96473db6fbfa6973c4e2c5fd908856d7 400 SUPERFAMILY SSF54631 276 394 3.78E-12 T 28-03-2018 AM393_RS04290 96473db6fbfa6973c4e2c5fd908856d7 400 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 36 394 1.1E-186 T 28-03-2018 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 AM393_RS04290 96473db6fbfa6973c4e2c5fd908856d7 400 Pfam PF00571 CBS domain 347 393 1.5E-5 T 28-03-2018 IPR000644 CBS domain AM393_RS04290 96473db6fbfa6973c4e2c5fd908856d7 400 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS04290 96473db6fbfa6973c4e2c5fd908856d7 400 Gene3D G3DSA:3.40.50.300 2 264 1.3E-75 T 28-03-2018 AM393_RS04290 96473db6fbfa6973c4e2c5fd908856d7 400 SMART SM00382 53 242 1.2E-18 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS26255 c79c17f46be9f42c458470724cff7911 212 SUPERFAMILY SSF48498 83 206 2.14E-26 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AM393_RS26255 c79c17f46be9f42c458470724cff7911 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 4.4E-6 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM393_RS26255 c79c17f46be9f42c458470724cff7911 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 4.4E-6 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM393_RS26255 c79c17f46be9f42c458470724cff7911 212 Gene3D G3DSA:1.10.10.60 5 45 9.6E-14 T 28-03-2018 AM393_RS26255 c79c17f46be9f42c458470724cff7911 212 SUPERFAMILY SSF46689 9 87 4.62E-18 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS26255 c79c17f46be9f42c458470724cff7911 212 Gene3D G3DSA:1.10.260.40 46 66 2.1E-6 T 28-03-2018 AM393_RS26255 c79c17f46be9f42c458470724cff7911 212 Gene3D G3DSA:1.10.357.10 67 208 4.2E-19 T 28-03-2018 AM393_RS26255 c79c17f46be9f42c458470724cff7911 212 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 62 4.1E-13 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM393_RS28800 cab7c90631a53c22f1765b6230674006 477 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 280 293 1.4E-15 T 28-03-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 AM393_RS28800 cab7c90631a53c22f1765b6230674006 477 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 97 113 1.4E-15 T 28-03-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 AM393_RS28800 cab7c90631a53c22f1765b6230674006 477 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 226 240 1.4E-15 T 28-03-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 AM393_RS28800 cab7c90631a53c22f1765b6230674006 477 SUPERFAMILY SSF53335 96 460 5.11E-76 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM393_RS28800 cab7c90631a53c22f1765b6230674006 477 ProSitePatterns PS00095 C-5 cytosine-specific DNA methylases C-terminal signature. 441 459 - T 28-03-2018 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site KEGG: 00270+2.1.1.37 AM393_RS28800 cab7c90631a53c22f1765b6230674006 477 Gene3D G3DSA:3.90.120.10 313 447 3.0E-25 T 28-03-2018 AM393_RS28800 cab7c90631a53c22f1765b6230674006 477 Gene3D G3DSA:3.40.50.150 87 309 2.0E-56 T 28-03-2018 AM393_RS28800 cab7c90631a53c22f1765b6230674006 477 ProSitePatterns PS00094 C-5 cytosine-specific DNA methylases active site. 178 190 - T 28-03-2018 IPR018117 DNA methylase, C-5 cytosine-specific, active site KEGG: 00270+2.1.1.37|Reactome: R-HSA-212300|Reactome: R-HSA-5334118 AM393_RS28800 cab7c90631a53c22f1765b6230674006 477 Pfam PF00145 C-5 cytosine-specific DNA methylase 96 457 7.4E-77 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM393_RS28800 cab7c90631a53c22f1765b6230674006 477 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 98 459 3.6E-115 T 28-03-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 AM393_RS12895 b793773052873f772dd53a3397040866 155 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 7 149 3.2E-32 T 28-03-2018 IPR002178 PTS EIIA type-2 domain AM393_RS12895 b793773052873f772dd53a3397040866 155 SUPERFAMILY SSF55804 7 149 6.67E-35 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 AM393_RS12895 b793773052873f772dd53a3397040866 155 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 53 69 - T 28-03-2018 IPR002178 PTS EIIA type-2 domain AM393_RS12895 b793773052873f772dd53a3397040866 155 Gene3D G3DSA:3.40.930.10 2 151 1.7E-33 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 AM393_RS01845 a621840e1af7a5b8bd16121b4b9bd00d 213 SUPERFAMILY SSF52540 8 205 2.22E-51 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS01845 a621840e1af7a5b8bd16121b4b9bd00d 213 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 10 199 1.3E-44 T 28-03-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 Reactome: R-HSA-73614 AM393_RS01845 a621840e1af7a5b8bd16121b4b9bd00d 213 TIGRFAM TIGR00235 udk: uridine kinase 6 213 2.2E-95 T 28-03-2018 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|Reactome: R-HSA-73614 AM393_RS01845 a621840e1af7a5b8bd16121b4b9bd00d 213 Gene3D G3DSA:3.40.50.300 4 213 3.9E-55 T 28-03-2018 AM393_RS01845 a621840e1af7a5b8bd16121b4b9bd00d 213 Hamap MF_00551 Uridine kinase [udk]. 5 213 41.081 T 28-03-2018 IPR026008 Uridine kinase GO:0004849|GO:0005524|GO:0016773 KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 AM393_RS01845 a621840e1af7a5b8bd16121b4b9bd00d 213 PRINTS PR00988 Uridine kinase signature 157 168 7.6E-39 T 28-03-2018 AM393_RS01845 a621840e1af7a5b8bd16121b4b9bd00d 213 PRINTS PR00988 Uridine kinase signature 8 25 7.6E-39 T 28-03-2018 AM393_RS01845 a621840e1af7a5b8bd16121b4b9bd00d 213 PRINTS PR00988 Uridine kinase signature 87 102 7.6E-39 T 28-03-2018 AM393_RS01845 a621840e1af7a5b8bd16121b4b9bd00d 213 PRINTS PR00988 Uridine kinase signature 143 153 7.6E-39 T 28-03-2018 AM393_RS01845 a621840e1af7a5b8bd16121b4b9bd00d 213 PRINTS PR00988 Uridine kinase signature 179 192 7.6E-39 T 28-03-2018 AM393_RS01845 a621840e1af7a5b8bd16121b4b9bd00d 213 PRINTS PR00988 Uridine kinase signature 42 53 7.6E-39 T 28-03-2018 AM393_RS11555 0060466d9c102384be8f831484007594 162 SUPERFAMILY SSF82679 2 98 4.05E-27 T 28-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AM393_RS11555 0060466d9c102384be8f831484007594 162 Hamap MF_00951 Transcription antitermination protein RfaH [rfaH]. 1 162 46.88 T 28-03-2018 IPR010215 Transcription antitermination protein RfaH GO:0006355 AM393_RS11555 0060466d9c102384be8f831484007594 162 TIGRFAM TIGR01955 RfaH: transcription elongation factor/antiterminator RfaH 4 159 4.5E-65 T 28-03-2018 IPR010215 Transcription antitermination protein RfaH GO:0006355 AM393_RS11555 0060466d9c102384be8f831484007594 162 SMART SM00738 1 100 1.2E-31 T 28-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AM393_RS11555 0060466d9c102384be8f831484007594 162 Pfam PF02357 Transcription termination factor nusG 3 96 1.7E-18 T 28-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AM393_RS11555 0060466d9c102384be8f831484007594 162 Gene3D G3DSA:2.30.30.30 111 162 1.8E-4 T 28-03-2018 IPR014722 Ribosomal protein L2 domain 2 AM393_RS11555 0060466d9c102384be8f831484007594 162 Gene3D G3DSA:3.30.70.940 1 97 3.9E-18 T 28-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AM393_RS10940 1c766d34b9559e68a01fa4e4c197396c 457 SUPERFAMILY SSF47384 224 300 3.53E-16 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM393_RS10940 1c766d34b9559e68a01fa4e4c197396c 457 Pfam PF00512 His Kinase A (phospho-acceptor) domain 238 299 5.6E-14 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM393_RS10940 1c766d34b9559e68a01fa4e4c197396c 457 Pfam PF16527 Two-component sensor protein CpxA, periplasmic domain 82 145 1.5E-10 T 28-03-2018 IPR032404 Two-component sensor protein CpxA, periplasmic domain AM393_RS10940 1c766d34b9559e68a01fa4e4c197396c 457 Gene3D G3DSA:1.10.287.130 228 296 1.5E-15 T 28-03-2018 AM393_RS10940 1c766d34b9559e68a01fa4e4c197396c 457 SMART SM00304 184 237 1.1E-9 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM393_RS10940 1c766d34b9559e68a01fa4e4c197396c 457 Gene3D G3DSA:3.30.565.10 303 457 4.5E-40 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS10940 1c766d34b9559e68a01fa4e4c197396c 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 439 452 1.7E-15 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM393_RS10940 1c766d34b9559e68a01fa4e4c197396c 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 415 433 1.7E-15 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM393_RS10940 1c766d34b9559e68a01fa4e4c197396c 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 398 408 1.7E-15 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM393_RS10940 1c766d34b9559e68a01fa4e4c197396c 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 380 394 1.7E-15 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM393_RS10940 1c766d34b9559e68a01fa4e4c197396c 457 SMART SM00387 345 455 4.2E-33 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS10940 1c766d34b9559e68a01fa4e4c197396c 457 SMART SM00388 238 300 2.0E-15 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM393_RS10940 1c766d34b9559e68a01fa4e4c197396c 457 Pfam PF00672 HAMP domain 184 234 5.7E-8 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM393_RS10940 1c766d34b9559e68a01fa4e4c197396c 457 SUPERFAMILY SSF55874 289 453 7.47E-39 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS10940 1c766d34b9559e68a01fa4e4c197396c 457 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 346 454 1.0E-20 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS22730 b6ff0934d672887b9308c3c6732da54d 1300 Pfam PF04408 Helicase associated domain (HA2) 466 557 6.0E-17 T 28-03-2018 IPR007502 Helicase-associated domain GO:0004386 AM393_RS22730 b6ff0934d672887b9308c3c6732da54d 1300 SMART SM00382 92 384 1.7E-4 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS22730 b6ff0934d672887b9308c3c6732da54d 1300 Gene3D G3DSA:3.40.50.300 76 235 1.5E-29 T 28-03-2018 AM393_RS22730 b6ff0934d672887b9308c3c6732da54d 1300 SUPERFAMILY SSF52540 74 600 1.51E-110 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS22730 b6ff0934d672887b9308c3c6732da54d 1300 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 13 1297 0.0 T 28-03-2018 IPR010222 RNA helicase HrpA GO:0004004 AM393_RS22730 b6ff0934d672887b9308c3c6732da54d 1300 Pfam PF11898 Domain of unknown function (DUF3418) 713 1297 4.1E-237 T 28-03-2018 IPR024590 RNA helicase HrpA, C-terminal AM393_RS22730 b6ff0934d672887b9308c3c6732da54d 1300 Pfam PF00270 DEAD/DEAH box helicase 84 233 1.2E-5 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AM393_RS22730 b6ff0934d672887b9308c3c6732da54d 1300 SMART SM00847 464 559 3.8E-37 T 28-03-2018 IPR007502 Helicase-associated domain GO:0004386 AM393_RS22730 b6ff0934d672887b9308c3c6732da54d 1300 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 622 698 6.9E-18 T 28-03-2018 IPR011709 Domain of unknown function DUF1605 AM393_RS22730 b6ff0934d672887b9308c3c6732da54d 1300 SMART SM00490 304 404 3.6E-15 T 28-03-2018 IPR001650 Helicase, C-terminal AM393_RS22730 b6ff0934d672887b9308c3c6732da54d 1300 Gene3D G3DSA:3.40.50.300 253 424 4.6E-46 T 28-03-2018 AM393_RS22730 b6ff0934d672887b9308c3c6732da54d 1300 SMART SM00487 75 259 3.9E-28 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AM393_RS22730 b6ff0934d672887b9308c3c6732da54d 1300 Pfam PF00271 Helicase conserved C-terminal domain 286 403 1.5E-10 T 28-03-2018 IPR001650 Helicase, C-terminal AM393_RS00590 c5937f856edaf71f9a9250a045e64b15 124 Gene3D G3DSA:2.60.40.1220 26 124 6.9E-32 T 28-03-2018 AM393_RS00590 c5937f856edaf71f9a9250a045e64b15 124 SUPERFAMILY SSF81296 26 124 5.88E-27 T 28-03-2018 IPR014756 Immunoglobulin E-set AM393_RS00590 c5937f856edaf71f9a9250a045e64b15 124 Pfam PF04234 CopC domain 27 123 2.0E-25 T 28-03-2018 IPR007348 CopC domain GO:0005507|GO:0042597|GO:0046688 AM393_RS00600 1f82e046fd6bad0dc5e678e63d614bd7 219 Pfam PF00929 Exonuclease 4 147 1.8E-13 T 28-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AM393_RS00600 1f82e046fd6bad0dc5e678e63d614bd7 219 SMART SM00479 1 156 3.1E-38 T 28-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AM393_RS00600 1f82e046fd6bad0dc5e678e63d614bd7 219 SUPERFAMILY SSF53098 4 184 8.18E-35 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM393_RS00600 1f82e046fd6bad0dc5e678e63d614bd7 219 Gene3D G3DSA:3.30.420.10 1 163 2.0E-29 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM393_RS10030 71b1183d805f51090a0684e79d10bfab 454 SUPERFAMILY SSF56954 2 452 4.84E-98 T 28-03-2018 AM393_RS10030 71b1183d805f51090a0684e79d10bfab 454 Pfam PF02321 Outer membrane efflux protein 271 437 1.2E-28 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AM393_RS10030 71b1183d805f51090a0684e79d10bfab 454 Pfam PF02321 Outer membrane efflux protein 58 240 1.6E-20 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AM393_RS10030 71b1183d805f51090a0684e79d10bfab 454 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 8 452 1.8E-110 T 28-03-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 AM393_RS10030 71b1183d805f51090a0684e79d10bfab 454 Gene3D G3DSA:1.20.1600.10 17 454 2.1E-89 T 28-03-2018 AM393_RS00770 d217afb0b225280b3d5007415f0f8971 474 TIGRFAM TIGR02400 trehalose_OtsA: alpha,alpha-trehalose-phosphate synthase (UDP-forming) 3 452 1.7E-181 T 28-03-2018 IPR012766 Alpha,alpha-trehalose-phosphate synthase GO:0003825|GO:0005992 KEGG: 00500+2.4.1.15 AM393_RS00770 d217afb0b225280b3d5007415f0f8971 474 Gene3D G3DSA:3.40.50.2000 237 437 2.0E-41 T 28-03-2018 AM393_RS00770 d217afb0b225280b3d5007415f0f8971 474 Pfam PF00982 Glycosyltransferase family 20 17 452 4.7E-146 T 28-03-2018 IPR001830 Glycosyl transferase, family 20 GO:0003824|GO:0005992 AM393_RS00770 d217afb0b225280b3d5007415f0f8971 474 SUPERFAMILY SSF53756 2 454 7.53E-150 T 28-03-2018 AM393_RS00770 d217afb0b225280b3d5007415f0f8971 474 Gene3D G3DSA:3.40.50.2000 1 236 1.9E-68 T 28-03-2018 AM393_RS15445 5e5a1ba56a7c82112f6b890fa208c6e5 280 Gene3D G3DSA:3.90.1720.10 61 252 2.6E-26 T 28-03-2018 AM393_RS15445 5e5a1ba56a7c82112f6b890fa208c6e5 280 Pfam PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family 65 156 5.8E-9 T 28-03-2018 IPR024453 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family AM393_RS15445 5e5a1ba56a7c82112f6b890fa208c6e5 280 SUPERFAMILY SSF54001 64 160 1.41E-26 T 28-03-2018 AM393_RS15445 5e5a1ba56a7c82112f6b890fa208c6e5 280 SUPERFAMILY SSF54001 201 261 1.41E-26 T 28-03-2018 AM393_RS17475 0dc5d077da82f2b03eae10a0c6be8303 265 Gene3D G3DSA:3.40.50.300 5 242 2.5E-48 T 28-03-2018 AM393_RS17475 0dc5d077da82f2b03eae10a0c6be8303 265 SMART SM00382 34 219 2.9E-13 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS17475 0dc5d077da82f2b03eae10a0c6be8303 265 SUPERFAMILY SSF52540 9 232 3.13E-49 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS17475 0dc5d077da82f2b03eae10a0c6be8303 265 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS17475 0dc5d077da82f2b03eae10a0c6be8303 265 Pfam PF00005 ABC transporter 32 169 1.1E-26 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS14445 beb93399b37766eb5ae87cb49a48b63f 938 Gene3D G3DSA:3.90.740.10 189 386 2.5E-57 T 28-03-2018 AM393_RS14445 beb93399b37766eb5ae87cb49a48b63f 938 SUPERFAMILY SSF50677 204 403 1.05E-53 T 28-03-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 AM393_RS14445 beb93399b37766eb5ae87cb49a48b63f 938 SUPERFAMILY SSF47323 652 929 2.43E-79 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM393_RS14445 beb93399b37766eb5ae87cb49a48b63f 938 Gene3D G3DSA:3.30.2320.20 801 896 1.8E-25 T 28-03-2018 AM393_RS14445 beb93399b37766eb5ae87cb49a48b63f 938 Gene3D G3DSA:3.40.50.620 42 124 3.7E-28 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM393_RS14445 beb93399b37766eb5ae87cb49a48b63f 938 Gene3D G3DSA:1.10.730.10 591 794 1.8E-46 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM393_RS14445 beb93399b37766eb5ae87cb49a48b63f 938 Pfam PF06827 Zinc finger found in FPG and IleRS 898 926 2.1E-9 T 28-03-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 AM393_RS14445 beb93399b37766eb5ae87cb49a48b63f 938 Pfam PF08264 Anticodon-binding domain of tRNA 685 840 3.5E-29 T 28-03-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 AM393_RS14445 beb93399b37766eb5ae87cb49a48b63f 938 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 58 69 - T 28-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM393_RS14445 beb93399b37766eb5ae87cb49a48b63f 938 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 15 843 0.0 T 28-03-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AM393_RS14445 beb93399b37766eb5ae87cb49a48b63f 938 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 2 929 21.482 T 28-03-2018 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 AM393_RS14445 beb93399b37766eb5ae87cb49a48b63f 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 526 539 1.4E-32 T 28-03-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AM393_RS14445 beb93399b37766eb5ae87cb49a48b63f 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 51 62 1.4E-32 T 28-03-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AM393_RS14445 beb93399b37766eb5ae87cb49a48b63f 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 238 261 1.4E-32 T 28-03-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AM393_RS14445 beb93399b37766eb5ae87cb49a48b63f 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 401 416 1.4E-32 T 28-03-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AM393_RS14445 beb93399b37766eb5ae87cb49a48b63f 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 561 570 1.4E-32 T 28-03-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AM393_RS14445 beb93399b37766eb5ae87cb49a48b63f 938 Gene3D G3DSA:3.40.50.620 387 590 3.8E-53 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM393_RS14445 beb93399b37766eb5ae87cb49a48b63f 938 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 28 640 4.5E-229 T 28-03-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM393_RS14445 beb93399b37766eb5ae87cb49a48b63f 938 SUPERFAMILY SSF52374 403 648 1.32E-136 T 28-03-2018 AM393_RS14445 beb93399b37766eb5ae87cb49a48b63f 938 SUPERFAMILY SSF52374 3 202 1.32E-136 T 28-03-2018 AM393_RS23035 37d0b0178dd247a434ab54b03ffe6680 254 Gene3D G3DSA:3.40.50.1820 1 252 1.0E-47 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AM393_RS23035 37d0b0178dd247a434ab54b03ffe6680 254 TIGRFAM TIGR02427 protocat_pcaD: 3-oxoadipate enol-lactonase 3 249 5.7E-86 T 28-03-2018 IPR026968 3-oxoadipate enol-lactonase 1/2 GO:0042952|GO:0047570 KEGG: 00362+3.1.1.24|MetaCyc: PWY-6185 AM393_RS23035 37d0b0178dd247a434ab54b03ffe6680 254 PRINTS PR00111 Alpha/beta hydrolase fold signature 39 54 3.8E-5 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM393_RS23035 37d0b0178dd247a434ab54b03ffe6680 254 PRINTS PR00111 Alpha/beta hydrolase fold signature 82 95 3.8E-5 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM393_RS23035 37d0b0178dd247a434ab54b03ffe6680 254 PRINTS PR00111 Alpha/beta hydrolase fold signature 195 209 3.8E-5 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM393_RS23035 37d0b0178dd247a434ab54b03ffe6680 254 Pfam PF12146 Serine aminopeptidase, S33 33 222 2.0E-13 T 28-03-2018 IPR022742 Serine aminopeptidase, S33 AM393_RS23035 37d0b0178dd247a434ab54b03ffe6680 254 SUPERFAMILY SSF53474 3 249 3.45E-59 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AM393_RS01800 59dbe16189d0e9d956b90c13daf3fabf 717 Gene3D G3DSA:3.30.1890.10 44 422 7.0E-74 T 28-03-2018 AM393_RS01800 59dbe16189d0e9d956b90c13daf3fabf 717 Pfam PF13614 AAA domain 535 648 9.4E-8 T 28-03-2018 IPR025669 AAA domain AM393_RS01800 59dbe16189d0e9d956b90c13daf3fabf 717 Gene3D G3DSA:3.40.50.300 499 709 2.2E-29 T 28-03-2018 AM393_RS01800 59dbe16189d0e9d956b90c13daf3fabf 717 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 504 710 3.3E-44 T 28-03-2018 IPR005702 Exopolysaccharide synthesis protein GO:0045226 AM393_RS01800 59dbe16189d0e9d956b90c13daf3fabf 717 Pfam PF02706 Chain length determinant protein 14 105 8.5E-21 T 28-03-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 AM393_RS01800 59dbe16189d0e9d956b90c13daf3fabf 717 Pfam PF13807 G-rich domain on putative tyrosine kinase 366 445 3.4E-30 T 28-03-2018 IPR032807 Tyrosine kinase, G-rich domain AM393_RS01800 59dbe16189d0e9d956b90c13daf3fabf 717 SUPERFAMILY SSF52540 522 699 5.79E-33 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS07950 ab081d61769ebef51020394b5c20677f 321 Gene3D G3DSA:1.10.1200.80 252 321 1.6E-21 T 28-03-2018 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 AM393_RS07950 ab081d61769ebef51020394b5c20677f 321 SUPERFAMILY SSF51395 10 319 2.01E-86 T 28-03-2018 AM393_RS07950 ab081d61769ebef51020394b5c20677f 321 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 94 112 - T 28-03-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 AM393_RS07950 ab081d61769ebef51020394b5c20677f 321 Pfam PF01207 Dihydrouridine synthase (Dus) 14 318 3.0E-116 T 28-03-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AM393_RS07950 ab081d61769ebef51020394b5c20677f 321 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 3 320 4.6E-140 T 28-03-2018 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 AM393_RS07950 ab081d61769ebef51020394b5c20677f 321 PIRSF PIRSF006621 1 321 6.8E-101 T 28-03-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AM393_RS07950 ab081d61769ebef51020394b5c20677f 321 Gene3D G3DSA:3.20.20.70 6 246 6.1E-56 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM393_RS07950 ab081d61769ebef51020394b5c20677f 321 Hamap MF_02042 tRNA-dihydrouridine synthase B [dusB]. 1 321 49.178 T 28-03-2018 IPR032887 tRNA-dihydrouridine synthase B GO:0002943|GO:0017150 AM393_RS26080 2c30f0e6daad9a5238a699077e46dd95 204 Pfam PF06353 Protein of unknown function (DUF1062) 36 165 2.4E-43 T 28-03-2018 IPR009412 Protein of unknown function DUF1062 AM393_RS26080 2c30f0e6daad9a5238a699077e46dd95 204 PIRSF PIRSF021719 1 202 5.6E-68 T 28-03-2018 IPR009412 Protein of unknown function DUF1062 AM393_RS07015 1da443608ce0c7f73848513b71958f94 555 SUPERFAMILY SSF51703 1 554 1.37E-289 T 28-03-2018 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0008152|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 AM393_RS07015 1da443608ce0c7f73848513b71958f94 555 Gene3D G3DSA:3.20.20.350 3 554 0.0 T 28-03-2018 IPR003206 Diol/glycerol dehydratase, large subunit GO:0008152|GO:0016836|GO:0031419|GO:0050215 AM393_RS07015 1da443608ce0c7f73848513b71958f94 555 ProDom PD025428 SUBUNIT GLYCEROL DEHYDRATASE LARGE LYASE DHAB ALPHA DIOL B12-DEPENDENT METABOLISM 9 550 0.0 T 28-03-2018 IPR003206 Diol/glycerol dehydratase, large subunit GO:0008152|GO:0016836|GO:0031419|GO:0050215 AM393_RS07015 1da443608ce0c7f73848513b71958f94 555 PIRSF PIRSF018507 2 555 0.0 T 28-03-2018 IPR003206 Diol/glycerol dehydratase, large subunit GO:0008152|GO:0016836|GO:0031419|GO:0050215 AM393_RS07015 1da443608ce0c7f73848513b71958f94 555 Pfam PF02286 Dehydratase large subunit 2 552 0.0 T 28-03-2018 IPR003206 Diol/glycerol dehydratase, large subunit GO:0008152|GO:0016836|GO:0031419|GO:0050215 AM393_RS05440 2931c69850acc0e97884fb66cb0e1629 346 Gene3D G3DSA:3.20.20.100 1 346 1.1E-93 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM393_RS05440 2931c69850acc0e97884fb66cb0e1629 346 Pfam PF00248 Aldo/keto reductase family 16 337 4.0E-71 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM393_RS05440 2931c69850acc0e97884fb66cb0e1629 346 PRINTS PR00069 Aldo-keto reductase signature 164 181 2.8E-8 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM393_RS05440 2931c69850acc0e97884fb66cb0e1629 346 PRINTS PR00069 Aldo-keto reductase signature 116 134 2.8E-8 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM393_RS05440 2931c69850acc0e97884fb66cb0e1629 346 SUPERFAMILY SSF51430 1 344 3.14E-105 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM393_RS02790 0b96c013e43e5d7818b7340f18930384 257 Gene3D G3DSA:3.40.50.300 1 256 1.8E-71 T 28-03-2018 AM393_RS02790 0b96c013e43e5d7818b7340f18930384 257 SUPERFAMILY SSF52540 6 251 4.05E-74 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS02790 0b96c013e43e5d7818b7340f18930384 257 PIRSF PIRSF039085 2 257 2.8E-121 T 28-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 AM393_RS02790 0b96c013e43e5d7818b7340f18930384 257 Pfam PF00005 ABC transporter 21 181 3.1E-33 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS02790 0b96c013e43e5d7818b7340f18930384 257 SMART SM00382 30 229 4.4E-15 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS02790 0b96c013e43e5d7818b7340f18930384 257 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS17850 072d8809eadbf2af1d4880249a010599 277 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 94 274 3.8E-29 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS17850 072d8809eadbf2af1d4880249a010599 277 Gene3D G3DSA:1.10.3720.10 5 266 1.0E-42 T 28-03-2018 AM393_RS17850 072d8809eadbf2af1d4880249a010599 277 SUPERFAMILY SSF161098 71 257 1.7E-25 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS17850 072d8809eadbf2af1d4880249a010599 277 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 6 53 1.0E-11 T 28-03-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain AM393_RS10470 4710d0470ccfcaf59b083b735929dd14 296 SUPERFAMILY SSF161098 35 286 4.06E-32 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS10470 4710d0470ccfcaf59b083b735929dd14 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 101 289 9.9E-30 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS10470 4710d0470ccfcaf59b083b735929dd14 296 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 28 294 1.9E-84 T 28-03-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 AM393_RS10470 4710d0470ccfcaf59b083b735929dd14 296 Gene3D G3DSA:1.10.3720.10 19 287 6.3E-36 T 28-03-2018 AM393_RS04530 0b4cf88e64ad2300e66ae9f834e7e47b 102 Pfam PF08845 Toxin SymE, type I toxin-antitoxin system 17 75 4.9E-19 T 28-03-2018 IPR014944 Toxin SymE-like GO:0003723|GO:0005737|GO:0016070|GO:0016788 AM393_RS17765 f362f34d4458e202f7e430381af94137 359 Gene3D G3DSA:2.40.50.100 53 108 1.1E-16 T 28-03-2018 AM393_RS17765 f362f34d4458e202f7e430381af94137 359 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 29 357 1.6E-73 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AM393_RS17765 f362f34d4458e202f7e430381af94137 359 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 106 273 9.2E-9 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AM393_RS17765 f362f34d4458e202f7e430381af94137 359 Pfam PF13533 Biotin-lipoyl like 55 102 1.9E-10 T 28-03-2018 AM393_RS17765 f362f34d4458e202f7e430381af94137 359 Gene3D G3DSA:2.40.50.100 157 344 0.3 T 28-03-2018 AM393_RS17765 f362f34d4458e202f7e430381af94137 359 SUPERFAMILY SSF111369 44 278 1.31E-50 T 28-03-2018 AM393_RS17765 f362f34d4458e202f7e430381af94137 359 Gene3D G3DSA:1.10.287.470 109 156 6.7E-11 T 28-03-2018 AM393_RS08435 7d8b0f2b050aae7f627482e08a2958d0 340 SUPERFAMILY SSF53474 37 333 5.08E-39 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AM393_RS08435 7d8b0f2b050aae7f627482e08a2958d0 340 ProSitePatterns PS01133 Uncharacterized protein family UPF0017 signature. 240 281 - T 28-03-2018 IPR000952 AB hydrolase 4, conserved site AM393_RS08435 7d8b0f2b050aae7f627482e08a2958d0 340 Pfam PF00561 alpha/beta hydrolase fold 74 314 1.1E-20 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM393_RS08435 7d8b0f2b050aae7f627482e08a2958d0 340 PIRSF PIRSF005211 13 338 4.6E-110 T 28-03-2018 IPR012020 AB hydrolase 4 family AM393_RS08435 7d8b0f2b050aae7f627482e08a2958d0 340 Gene3D G3DSA:3.40.50.1820 38 339 2.7E-29 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AM393_RS01685 ae3aa2a8b7c8d901428c273922972b81 438 Gene3D G3DSA:1.20.5.50 324 433 9.0E-7 T 28-03-2018 AM393_RS01685 ae3aa2a8b7c8d901428c273922972b81 438 Pfam PF00535 Glycosyl transferase family 2 11 138 1.9E-32 T 28-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AM393_RS01685 ae3aa2a8b7c8d901428c273922972b81 438 Gene3D G3DSA:3.90.550.10 8 235 2.1E-44 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM393_RS01685 ae3aa2a8b7c8d901428c273922972b81 438 SUPERFAMILY SSF53448 9 228 1.13E-50 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM393_RS20790 da7e45e6236f63d034cc5a118f25b3bb 264 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 3 256 1.1E-93 T 28-03-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 AM393_RS20790 da7e45e6236f63d034cc5a118f25b3bb 264 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 191 207 - T 28-03-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 AM393_RS20790 da7e45e6236f63d034cc5a118f25b3bb 264 PIRSF PIRSF005902 1 258 3.5E-74 T 28-03-2018 IPR001130 TatD family GO:0016788 AM393_RS20790 da7e45e6236f63d034cc5a118f25b3bb 264 SUPERFAMILY SSF51556 1 258 1.86E-86 T 28-03-2018 IPR032466 Metal-dependent hydrolase AM393_RS20790 da7e45e6236f63d034cc5a118f25b3bb 264 Pfam PF01026 TatD related DNase 4 255 5.6E-75 T 28-03-2018 IPR001130 TatD family GO:0016788 AM393_RS20790 da7e45e6236f63d034cc5a118f25b3bb 264 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 3 11 - T 28-03-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 AM393_RS20790 da7e45e6236f63d034cc5a118f25b3bb 264 Gene3D G3DSA:3.20.20.140 1 263 4.1E-80 T 28-03-2018 AM393_RS19745 105f58c59ebab540782604b595372fbf 238 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 25 231 5.1E-18 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS19745 105f58c59ebab540782604b595372fbf 238 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 6 87 2.3E-13 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AM393_RS19745 105f58c59ebab540782604b595372fbf 238 SUPERFAMILY SSF161098 8 216 1.19E-38 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS19745 105f58c59ebab540782604b595372fbf 238 Gene3D G3DSA:1.10.3720.10 3 236 1.6E-37 T 28-03-2018 AM393_RS01780 b0e5bb016e2404f0d3aff5e14020e478 385 Pfam PF00534 Glycosyl transferases group 1 202 355 7.6E-27 T 28-03-2018 IPR001296 Glycosyl transferase, family 1 AM393_RS01780 b0e5bb016e2404f0d3aff5e14020e478 385 SUPERFAMILY SSF53756 10 368 1.75E-56 T 28-03-2018 AM393_RS01780 b0e5bb016e2404f0d3aff5e14020e478 385 Gene3D G3DSA:3.40.50.2000 40 381 2.6E-29 T 28-03-2018 AM393_RS01780 b0e5bb016e2404f0d3aff5e14020e478 385 Pfam PF13439 Glycosyltransferase Family 4 20 197 1.0E-9 T 28-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 AM393_RS20255 08154bccc0663ecf6451e719aca27445 137 Pfam PF13380 CoA binding domain 14 130 7.3E-40 T 28-03-2018 IPR003781 CoA-binding GO:0048037 AM393_RS20255 08154bccc0663ecf6451e719aca27445 137 SUPERFAMILY SSF51735 4 135 3.11E-44 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS20255 08154bccc0663ecf6451e719aca27445 137 Gene3D G3DSA:3.40.50.720 10 134 1.0E-33 T 28-03-2018 AM393_RS20255 08154bccc0663ecf6451e719aca27445 137 SMART SM00881 9 104 1.0E-26 T 28-03-2018 IPR003781 CoA-binding GO:0048037 AM393_RS10850 8cf85cdfb1b8164aea5631a7dba12f46 331 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 60 309 5.2E-54 T 28-03-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain AM393_RS10850 8cf85cdfb1b8164aea5631a7dba12f46 331 SUPERFAMILY SSF53822 61 317 2.72E-41 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AM393_RS10850 8cf85cdfb1b8164aea5631a7dba12f46 331 Gene3D G3DSA:1.10.260.40 1 52 2.5E-19 T 28-03-2018 AM393_RS10850 8cf85cdfb1b8164aea5631a7dba12f46 331 SUPERFAMILY SSF47413 2 56 3.86E-15 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM393_RS10850 8cf85cdfb1b8164aea5631a7dba12f46 331 SMART SM00354 1 70 6.5E-19 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM393_RS10850 8cf85cdfb1b8164aea5631a7dba12f46 331 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 47 3.8E-12 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM393_RS10850 8cf85cdfb1b8164aea5631a7dba12f46 331 Gene3D G3DSA:3.40.50.2300 53 176 7.6E-26 T 28-03-2018 AM393_RS10850 8cf85cdfb1b8164aea5631a7dba12f46 331 Gene3D G3DSA:3.40.50.2300 177 308 4.3E-26 T 28-03-2018 AM393_RS09970 e09d571edbb518d841af4d9c471e7514 301 SUPERFAMILY SSF46689 251 300 1.76E-10 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS09970 e09d571edbb518d841af4d9c471e7514 301 SUPERFAMILY SSF51182 24 83 4.27E-9 T 28-03-2018 IPR011051 RmlC-like cupin domain AM393_RS09970 e09d571edbb518d841af4d9c471e7514 301 Gene3D G3DSA:1.10.10.60 196 253 9.0E-11 T 28-03-2018 AM393_RS09970 e09d571edbb518d841af4d9c471e7514 301 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 283 299 9.6E-6 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM393_RS09970 e09d571edbb518d841af4d9c471e7514 301 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 268 283 9.6E-6 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM393_RS09970 e09d571edbb518d841af4d9c471e7514 301 Pfam PF12833 Helix-turn-helix domain 221 300 1.2E-20 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM393_RS09970 e09d571edbb518d841af4d9c471e7514 301 SUPERFAMILY SSF46689 198 248 3.19E-7 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS09970 e09d571edbb518d841af4d9c471e7514 301 Gene3D G3DSA:2.60.120.280 25 183 7.6E-19 T 28-03-2018 AM393_RS09970 e09d571edbb518d841af4d9c471e7514 301 Gene3D G3DSA:1.10.10.60 254 301 6.3E-13 T 28-03-2018 AM393_RS09970 e09d571edbb518d841af4d9c471e7514 301 SMART SM00342 215 299 2.4E-29 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM393_RS09970 e09d571edbb518d841af4d9c471e7514 301 Pfam PF12852 Cupin 2 182 8.4E-30 T 28-03-2018 IPR032783 AraC-type transcription regulator, ligand-binding domain AM393_RS09970 e09d571edbb518d841af4d9c471e7514 301 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 252 295 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM393_RS07900 0843f06a00e8b650cd1654d2236138d1 333 Gene3D G3DSA:3.90.420.10 63 333 1.6E-62 T 28-03-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 AM393_RS07900 0843f06a00e8b650cd1654d2236138d1 333 Hamap MF_01206 Protein-methionine-sulfoxide reductase catalytic subunit MsrP [msrP]. 4 333 54.736 T 28-03-2018 IPR022867 Protein-methionine-sulfoxide reductase subunit MsrP GO:0016667|GO:0030091|GO:0043546|GO:0055114 AM393_RS07900 0843f06a00e8b650cd1654d2236138d1 333 Pfam PF00174 Oxidoreductase molybdopterin binding domain 107 266 1.2E-29 T 28-03-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 AM393_RS07900 0843f06a00e8b650cd1654d2236138d1 333 SUPERFAMILY SSF56524 75 329 2.35E-92 T 28-03-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 AM393_RS23430 6c5f76e108ec796a60fd0d0b9238cb93 365 SMART SM00342 243 326 1.8E-25 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM393_RS23430 6c5f76e108ec796a60fd0d0b9238cb93 365 SUPERFAMILY SSF46689 228 277 2.74E-10 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS23430 6c5f76e108ec796a60fd0d0b9238cb93 365 Pfam PF01965 DJ-1/PfpI family 52 187 9.3E-16 T 28-03-2018 IPR002818 DJ-1/PfpI AM393_RS23430 6c5f76e108ec796a60fd0d0b9238cb93 365 Gene3D G3DSA:1.10.10.60 225 279 5.3E-11 T 28-03-2018 AM393_RS23430 6c5f76e108ec796a60fd0d0b9238cb93 365 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 280 322 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM393_RS23430 6c5f76e108ec796a60fd0d0b9238cb93 365 Gene3D G3DSA:1.10.10.60 280 342 5.5E-14 T 28-03-2018 AM393_RS23430 6c5f76e108ec796a60fd0d0b9238cb93 365 SUPERFAMILY SSF46689 280 330 2.25E-12 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS23430 6c5f76e108ec796a60fd0d0b9238cb93 365 Pfam PF12833 Helix-turn-helix domain 249 328 5.9E-22 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM393_RS23430 6c5f76e108ec796a60fd0d0b9238cb93 365 SUPERFAMILY SSF52317 19 208 3.91E-46 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AM393_RS23430 6c5f76e108ec796a60fd0d0b9238cb93 365 Gene3D G3DSA:3.40.50.880 14 224 3.0E-52 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AM393_RS06280 68f99f0ca0f977da162299429ab32fd7 429 TIGRFAM TIGR03760 ICE_TraI_Pfluor: integrating conjugative element relaxase, PFGI-1 class 28 238 1.2E-71 T 28-03-2018 IPR022391 Integrating conjugative element relaxase, PFGI-1 class AM393_RS06280 68f99f0ca0f977da162299429ab32fd7 429 Pfam PF07515 Putative conjugal transfer nickase/helicase TraI C-term 306 424 2.4E-25 T 28-03-2018 IPR011093 Putative conjugal transfer nickase/helicase TraI, C-terminal AM393_RS06280 68f99f0ca0f977da162299429ab32fd7 429 Gene3D G3DSA:2.40.10.200 324 424 5.1E-19 T 28-03-2018 AM393_RS06280 68f99f0ca0f977da162299429ab32fd7 429 Pfam PF07514 Putative helicase 28 236 2.6E-35 T 28-03-2018 IPR011119 Uncharacterised domain, helicase/relaxase, putative AM393_RS06280 68f99f0ca0f977da162299429ab32fd7 429 SUPERFAMILY SSF46785 305 423 4.9E-25 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS06620 4b00394ae0bc395c38b015adce73425d 200 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 32 163 9.8E-16 T 28-03-2018 AM393_RS06620 4b00394ae0bc395c38b015adce73425d 200 SUPERFAMILY SSF51735 1 199 8.71E-28 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS06620 4b00394ae0bc395c38b015adce73425d 200 Gene3D G3DSA:3.40.50.720 1 198 4.6E-30 T 28-03-2018 AM393_RS06620 4b00394ae0bc395c38b015adce73425d 200 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 144 1.6E-11 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS06620 4b00394ae0bc395c38b015adce73425d 200 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 99 115 1.6E-11 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS06620 4b00394ae0bc395c38b015adce73425d 200 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 2 19 1.6E-11 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS06620 4b00394ae0bc395c38b015adce73425d 200 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 162 1.6E-11 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS06620 4b00394ae0bc395c38b015adce73425d 200 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 54 65 1.6E-11 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS19685 8660576ad5dbd4c87e89c8fa871c0eb2 300 Gene3D G3DSA:3.30.1490.20 115 170 1.3E-11 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AM393_RS19685 8660576ad5dbd4c87e89c8fa871c0eb2 300 TIGRFAM TIGR00768 rimK_fam: alpha-L-glutamate ligase, RimK family 2 286 1.6E-91 T 28-03-2018 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX GO:0006464 Reactome: R-HSA-70614 AM393_RS19685 8660576ad5dbd4c87e89c8fa871c0eb2 300 Gene3D G3DSA:3.40.50.20 1 114 1.5E-33 T 28-03-2018 AM393_RS19685 8660576ad5dbd4c87e89c8fa871c0eb2 300 SUPERFAMILY SSF56059 98 288 8.37E-49 T 28-03-2018 AM393_RS19685 8660576ad5dbd4c87e89c8fa871c0eb2 300 Hamap MF_01552 Ribosomal protein S6--L-glutamate ligase [rimK]. 1 295 54.201 T 28-03-2018 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK AM393_RS19685 8660576ad5dbd4c87e89c8fa871c0eb2 300 Gene3D G3DSA:3.30.470.20 171 277 3.0E-33 T 28-03-2018 AM393_RS19685 8660576ad5dbd4c87e89c8fa871c0eb2 300 Pfam PF08443 RimK-like ATP-grasp domain 97 286 7.3E-78 T 28-03-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 AM393_RS00915 d65ac74a23c3a88ea089508e7ef291f6 266 Gene3D G3DSA:3.40.190.10 157 266 4.8E-15 T 28-03-2018 AM393_RS00915 d65ac74a23c3a88ea089508e7ef291f6 266 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 65 78 - T 28-03-2018 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 AM393_RS00915 d65ac74a23c3a88ea089508e7ef291f6 266 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 43 261 3.3E-71 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM393_RS00915 d65ac74a23c3a88ea089508e7ef291f6 266 SMART SM00079 42 262 2.3E-5 T 28-03-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 AM393_RS00915 d65ac74a23c3a88ea089508e7ef291f6 266 SMART SM00062 42 263 3.9E-84 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM393_RS00915 d65ac74a23c3a88ea089508e7ef291f6 266 Gene3D G3DSA:3.40.190.10 8 156 9.7E-49 T 28-03-2018 AM393_RS00915 d65ac74a23c3a88ea089508e7ef291f6 266 SUPERFAMILY SSF53850 11 264 6.01E-77 T 28-03-2018 AM393_RS16120 96a16965e85a31af65d7a5e4d9c36133 152 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 1 147 32.324 T 28-03-2018 IPR003791 Protein of unknown function UPF0178 AM393_RS16120 96a16965e85a31af65d7a5e4d9c36133 152 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 17 144 4.7E-50 T 28-03-2018 IPR003791 Protein of unknown function UPF0178 AM393_RS00885 016386ded27303e07f88b7ac0c7df1f6 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 164 7.5E-11 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS00885 016386ded27303e07f88b7ac0c7df1f6 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 180 7.5E-11 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS00885 016386ded27303e07f88b7ac0c7df1f6 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 192 7.5E-11 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS00885 016386ded27303e07f88b7ac0c7df1f6 218 ProSitePatterns PS00622 LuxR-type HTH domain signature. 164 191 - T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS00885 016386ded27303e07f88b7ac0c7df1f6 218 SMART SM00448 2 115 4.2E-31 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM393_RS00885 016386ded27303e07f88b7ac0c7df1f6 218 SUPERFAMILY SSF46894 132 210 8.16E-20 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM393_RS00885 016386ded27303e07f88b7ac0c7df1f6 218 SMART SM00421 147 204 2.4E-19 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS00885 016386ded27303e07f88b7ac0c7df1f6 218 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 204 5.7E-21 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS00885 016386ded27303e07f88b7ac0c7df1f6 218 SUPERFAMILY SSF52172 2 131 7.4E-32 T 28-03-2018 IPR011006 CheY-like superfamily AM393_RS00885 016386ded27303e07f88b7ac0c7df1f6 218 Gene3D G3DSA:3.40.50.2300 1 125 5.9E-33 T 28-03-2018 AM393_RS00885 016386ded27303e07f88b7ac0c7df1f6 218 Gene3D G3DSA:1.10.10.10 126 214 7.7E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS00885 016386ded27303e07f88b7ac0c7df1f6 218 Pfam PF00072 Response regulator receiver domain 4 116 2.2E-29 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM393_RS11740 980bd10ee671bd836bc07b63901d9402 489 Pfam PF02743 Cache domain 52 250 1.8E-20 T 28-03-2018 IPR033479 Double Cache domain 1 AM393_RS11740 980bd10ee671bd836bc07b63901d9402 489 Gene3D G3DSA:3.30.450.20 157 266 4.6E-15 T 28-03-2018 AM393_RS11740 980bd10ee671bd836bc07b63901d9402 489 Gene3D G3DSA:3.30.70.270 318 488 7.3E-42 T 28-03-2018 AM393_RS11740 980bd10ee671bd836bc07b63901d9402 489 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 333 486 7.4E-30 T 28-03-2018 IPR000160 GGDEF domain AM393_RS11740 980bd10ee671bd836bc07b63901d9402 489 Gene3D G3DSA:3.30.450.20 41 156 5.0E-14 T 28-03-2018 AM393_RS11740 980bd10ee671bd836bc07b63901d9402 489 Pfam PF00990 Diguanylate cyclase, GGDEF domain 335 485 6.8E-32 T 28-03-2018 IPR000160 GGDEF domain AM393_RS11740 980bd10ee671bd836bc07b63901d9402 489 SUPERFAMILY SSF103190 89 174 3.66E-5 T 28-03-2018 IPR029151 Periplasmic sensor domain-like AM393_RS11740 980bd10ee671bd836bc07b63901d9402 489 SUPERFAMILY SSF55073 340 487 3.06E-33 T 28-03-2018 IPR029787 Nucleotide cyclase AM393_RS11740 980bd10ee671bd836bc07b63901d9402 489 SMART SM00267 322 489 1.2E-36 T 28-03-2018 IPR000160 GGDEF domain AM393_RS16660 c01a4c6359a8e991b4a3afee2b89613a 87 SUPERFAMILY SSF143800 1 80 8.24E-21 T 28-03-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS16660 c01a4c6359a8e991b4a3afee2b89613a 87 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 1 80 26.005 T 28-03-2018 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM393_RS16660 c01a4c6359a8e991b4a3afee2b89613a 87 Pfam PF01197 Ribosomal protein L31 1 78 7.2E-23 T 28-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM393_RS16660 c01a4c6359a8e991b4a3afee2b89613a 87 PRINTS PR01249 Ribosomal protein L31 signature 2 19 1.1E-13 T 28-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM393_RS16660 c01a4c6359a8e991b4a3afee2b89613a 87 PRINTS PR01249 Ribosomal protein L31 signature 59 77 1.1E-13 T 28-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM393_RS16660 c01a4c6359a8e991b4a3afee2b89613a 87 PRINTS PR01249 Ribosomal protein L31 signature 44 59 1.1E-13 T 28-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM393_RS16660 c01a4c6359a8e991b4a3afee2b89613a 87 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 79 8.1E-17 T 28-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM393_RS05920 7dc508274ad93356b43065f8eaa9881d 167 Gene3D G3DSA:3.40.30.10 25 154 3.3E-21 T 28-03-2018 AM393_RS05920 7dc508274ad93356b43065f8eaa9881d 167 SUPERFAMILY SSF52833 7 154 3.6E-24 T 28-03-2018 IPR012336 Thioredoxin-like fold AM393_RS05920 7dc508274ad93356b43065f8eaa9881d 167 Pfam PF00578 AhpC/TSA family 40 144 2.2E-13 T 28-03-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AM393_RS23380 475c0d8c7dc5638de1c0414e956e9366 300 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 170 289 7.0E-35 T 28-03-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 AM393_RS23380 475c0d8c7dc5638de1c0414e956e9366 300 PIRSF PIRSF000103 1 294 2.1E-58 T 28-03-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 AM393_RS23380 475c0d8c7dc5638de1c0414e956e9366 300 SUPERFAMILY SSF48179 168 292 3.4E-37 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AM393_RS23380 475c0d8c7dc5638de1c0414e956e9366 300 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 6 163 5.4E-36 T 28-03-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 AM393_RS23380 475c0d8c7dc5638de1c0414e956e9366 300 Gene3D G3DSA:3.40.50.720 1 169 5.0E-27 T 28-03-2018 AM393_RS23380 475c0d8c7dc5638de1c0414e956e9366 300 SUPERFAMILY SSF51735 6 166 1.45E-33 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS23380 475c0d8c7dc5638de1c0414e956e9366 300 Gene3D G3DSA:1.10.1040.10 170 294 2.6E-36 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AM393_RS02750 f15dc82a0645ae8a162038006de25b57 715 SUPERFAMILY SSF53659 393 711 1.64E-94 T 28-03-2018 AM393_RS02750 f15dc82a0645ae8a162038006de25b57 715 Gene3D G3DSA:3.40.50.300 1 231 3.6E-27 T 28-03-2018 AM393_RS02750 f15dc82a0645ae8a162038006de25b57 715 Pfam PF01515 Phosphate acetyl/butaryl transferase 392 707 6.4E-128 T 28-03-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 AM393_RS02750 f15dc82a0645ae8a162038006de25b57 715 Gene3D G3DSA:3.40.50.10750 530 683 4.1E-64 T 28-03-2018 AM393_RS02750 f15dc82a0645ae8a162038006de25b57 715 SUPERFAMILY SSF52540 3 241 1.96E-26 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS02750 f15dc82a0645ae8a162038006de25b57 715 Pfam PF07085 DRTGG domain 234 345 1.0E-29 T 28-03-2018 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 AM393_RS02750 f15dc82a0645ae8a162038006de25b57 715 SUPERFAMILY SSF75138 230 354 7.19E-26 T 28-03-2018 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like AM393_RS02750 f15dc82a0645ae8a162038006de25b57 715 Gene3D G3DSA:3.40.1390.20 232 367 3.5E-28 T 28-03-2018 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like AM393_RS02750 f15dc82a0645ae8a162038006de25b57 715 PIRSF PIRSF006107 1 715 0.0 T 28-03-2018 IPR016475 Phosphate acetyltransferase, bacteria GO:0008959 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 AM393_RS02750 f15dc82a0645ae8a162038006de25b57 715 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 407 707 3.1E-138 T 28-03-2018 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 AM393_RS02750 f15dc82a0645ae8a162038006de25b57 715 Pfam PF13500 AAA domain 3 230 7.2E-46 T 28-03-2018 AM393_RS16085 e57f36e1bd3e5ce0f24104671a55fdff 365 Gene3D G3DSA:3.30.470.20 213 360 1.1E-44 T 28-03-2018 AM393_RS16085 e57f36e1bd3e5ce0f24104671a55fdff 365 PIRSF PIRSF039102 1 359 2.4E-138 T 28-03-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM393_RS16085 e57f36e1bd3e5ce0f24104671a55fdff 365 Pfam PF01820 D-ala D-ala ligase N-terminus 5 130 6.1E-29 T 28-03-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM393_RS16085 e57f36e1bd3e5ce0f24104671a55fdff 365 Pfam PF07478 D-ala D-ala ligase C-terminus 147 348 5.9E-83 T 28-03-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM393_RS16085 e57f36e1bd3e5ce0f24104671a55fdff 365 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 107 118 - T 28-03-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM393_RS16085 e57f36e1bd3e5ce0f24104671a55fdff 365 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 4 351 42.915 T 28-03-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM393_RS16085 e57f36e1bd3e5ce0f24104671a55fdff 365 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 293 321 - T 28-03-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM393_RS16085 e57f36e1bd3e5ce0f24104671a55fdff 365 SUPERFAMILY SSF52440 3 139 2.78E-36 T 28-03-2018 IPR016185 Pre-ATP-grasp domain AM393_RS16085 e57f36e1bd3e5ce0f24104671a55fdff 365 Gene3D G3DSA:3.30.1490.20 155 212 1.9E-21 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AM393_RS16085 e57f36e1bd3e5ce0f24104671a55fdff 365 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 5 350 4.2E-118 T 28-03-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM393_RS16085 e57f36e1bd3e5ce0f24104671a55fdff 365 SUPERFAMILY SSF56059 140 354 2.3E-63 T 28-03-2018 AM393_RS16085 e57f36e1bd3e5ce0f24104671a55fdff 365 Gene3D G3DSA:3.40.50.20 1 150 9.4E-44 T 28-03-2018 AM393_RS00535 7003fcffc268eda4516104b729c56a11 217 SUPERFAMILY SSF56300 10 213 3.65E-42 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like AM393_RS00535 7003fcffc268eda4516104b729c56a11 217 Pfam PF00149 Calcineurin-like phosphoesterase 12 93 1.7E-12 T 28-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AM393_RS00535 7003fcffc268eda4516104b729c56a11 217 Gene3D G3DSA:3.60.21.10 1 217 9.4E-35 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like AM393_RS00535 7003fcffc268eda4516104b729c56a11 217 ProSitePatterns PS00125 Serine/threonine specific protein phosphatases signature. 70 75 - T 28-03-2018 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase GO:0016787 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AM393_RS16245 f8235e8bd560097cf8c47217bd58a98a 193 Pfam PF04336 Acyl carrier protein phosphodiesterase 81 185 2.8E-31 T 28-03-2018 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 AM393_RS16245 f8235e8bd560097cf8c47217bd58a98a 193 PIRSF PIRSF011489 1 193 1.4E-83 T 28-03-2018 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 AM393_RS16245 f8235e8bd560097cf8c47217bd58a98a 193 Hamap MF_01950 Acyl carrier protein phosphodiesterase [acpH]. 1 193 52.72 T 28-03-2018 IPR023491 Acyl carrier protein phosphodiesterase, gammaproteobacteria GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 AM393_RS09035 82434b9543fae7d751034b6b2c202770 263 Pfam PF00005 ABC transporter 20 171 2.1E-33 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS09035 82434b9543fae7d751034b6b2c202770 263 SUPERFAMILY SSF52540 3 228 7.41E-62 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS09035 82434b9543fae7d751034b6b2c202770 263 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS09035 82434b9543fae7d751034b6b2c202770 263 SMART SM00382 29 221 1.8E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS09035 82434b9543fae7d751034b6b2c202770 263 TIGRFAM TIGR02769 nickel_nikE: nickel import ATP-binding protein NikE 3 252 2.3E-107 T 28-03-2018 IPR014137 Nickel import ATP-binding protein NikE GO:0005886|GO:0015413|GO:0015675|GO:0016151 AM393_RS09035 82434b9543fae7d751034b6b2c202770 263 Gene3D G3DSA:3.40.50.300 1 246 1.3E-63 T 28-03-2018 AM393_RS19060 613ef8d5ee3bbae592dc4e7a2362bd17 329 SMART SM00729 14 222 6.2E-5 T 28-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AM393_RS19060 613ef8d5ee3bbae592dc4e7a2362bd17 329 Pfam PF04055 Radical SAM superfamily 19 181 7.9E-28 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AM393_RS19060 613ef8d5ee3bbae592dc4e7a2362bd17 329 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 5 329 37.542 T 28-03-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 Reactome: R-HSA-947581 AM393_RS19060 613ef8d5ee3bbae592dc4e7a2362bd17 329 SUPERFAMILY SSF102114 5 281 1.16E-70 T 28-03-2018 AM393_RS19060 613ef8d5ee3bbae592dc4e7a2362bd17 329 Gene3D G3DSA:3.20.20.70 1 329 3.6E-70 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM393_RS19060 613ef8d5ee3bbae592dc4e7a2362bd17 329 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 20 31 - T 28-03-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 Reactome: R-HSA-947581 AM393_RS19060 613ef8d5ee3bbae592dc4e7a2362bd17 329 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 5 329 1.7E-107 T 28-03-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 Reactome: R-HSA-947581 AM393_RS19060 613ef8d5ee3bbae592dc4e7a2362bd17 329 Pfam PF06463 Molybdenum Cofactor Synthesis C 186 312 1.2E-38 T 28-03-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 Reactome: R-HSA-947581 AM393_RS19060 613ef8d5ee3bbae592dc4e7a2362bd17 329 Pfam PF13353 4Fe-4S single cluster domain 23 125 1.8E-6 T 28-03-2018 AM393_RS07260 b80f546611b737bed163eaba31390b6b 233 Gene3D G3DSA:2.60.120.10 12 134 4.0E-22 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AM393_RS07260 b80f546611b737bed163eaba31390b6b 233 Pfam PF02678 Pirin 5 119 1.2E-22 T 28-03-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 AM393_RS07260 b80f546611b737bed163eaba31390b6b 233 PIRSF PIRSF006232 1 230 8.0E-32 T 28-03-2018 IPR012093 Pirin Reactome: R-HSA-8935690 AM393_RS07260 b80f546611b737bed163eaba31390b6b 233 Gene3D G3DSA:2.60.120.10 135 233 1.4E-21 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AM393_RS07260 b80f546611b737bed163eaba31390b6b 233 SUPERFAMILY SSF51182 1 231 4.13E-45 T 28-03-2018 IPR011051 RmlC-like cupin domain AM393_RS16810 92d2aff568883c9cf38a0e8080f60147 136 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM393_RS16810 92d2aff568883c9cf38a0e8080f60147 136 Gene3D G3DSA:1.10.1660.10 1 55 3.0E-21 T 28-03-2018 AM393_RS16810 92d2aff568883c9cf38a0e8080f60147 136 SUPERFAMILY SSF46955 1 126 5.86E-36 T 28-03-2018 IPR009061 Putative DNA-binding domain AM393_RS16810 92d2aff568883c9cf38a0e8080f60147 136 SMART SM00422 1 70 9.8E-31 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM393_RS16810 92d2aff568883c9cf38a0e8080f60147 136 TIGRFAM TIGR02044 CueR: Cu(I)-responsive transcriptional regulator 1 126 1.9E-62 T 28-03-2018 IPR011789 Cu(I)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0005507|GO:0045893 AM393_RS16810 92d2aff568883c9cf38a0e8080f60147 136 Pfam PF13411 MerR HTH family regulatory protein 1 67 1.0E-18 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM393_RS16810 92d2aff568883c9cf38a0e8080f60147 136 Gene3D G3DSA:1.10.1660.10 56 135 9.3E-16 T 28-03-2018 AM393_RS16810 92d2aff568883c9cf38a0e8080f60147 136 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 9.4E-8 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM393_RS16810 92d2aff568883c9cf38a0e8080f60147 136 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 9.4E-8 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM393_RS16810 92d2aff568883c9cf38a0e8080f60147 136 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 9.4E-8 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM393_RS03255 324bf81a8ea877d93b9fcd89c90c4b6b 395 Pfam PF00465 Iron-containing alcohol dehydrogenase 27 387 2.4E-112 T 28-03-2018 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 AM393_RS03255 324bf81a8ea877d93b9fcd89c90c4b6b 395 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 191 219 - T 28-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 AM393_RS03255 324bf81a8ea877d93b9fcd89c90c4b6b 395 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 278 298 - T 28-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 AM393_RS03255 324bf81a8ea877d93b9fcd89c90c4b6b 395 Gene3D G3DSA:1.20.1090.10 203 395 5.8E-58 T 28-03-2018 AM393_RS03255 324bf81a8ea877d93b9fcd89c90c4b6b 395 Gene3D G3DSA:3.40.50.1970 27 201 1.1E-40 T 28-03-2018 AM393_RS03255 324bf81a8ea877d93b9fcd89c90c4b6b 395 SUPERFAMILY SSF56796 20 393 5.63E-113 T 28-03-2018 AM393_RS12120 6fe52cee8c02e9c2ae4d1058b9717dc6 237 SUPERFAMILY SSF56784 32 237 8.27E-76 T 28-03-2018 IPR023214 HAD-like domain AM393_RS12120 6fe52cee8c02e9c2ae4d1058b9717dc6 237 Gene3D G3DSA:3.40.50.1000 27 237 8.5E-41 T 28-03-2018 IPR023214 HAD-like domain AM393_RS12120 6fe52cee8c02e9c2ae4d1058b9717dc6 237 TIGRFAM TIGR01672 AphA: HAD phosphatase, family IIIB 1 237 1.3E-114 T 28-03-2018 IPR010025 HAD-superfamily phosphatase, subfamily IIIB, AphA GO:0003993|GO:0030288 KEGG: 00740+3.1.3.2|MetaCyc: PWY-6348 AM393_RS12120 6fe52cee8c02e9c2ae4d1058b9717dc6 237 Pfam PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) 11 220 1.5E-44 T 28-03-2018 IPR005519 Acid phosphatase, class B-like AM393_RS12120 6fe52cee8c02e9c2ae4d1058b9717dc6 237 PIRSF PIRSF017818 1 237 4.2E-124 T 28-03-2018 IPR010025 HAD-superfamily phosphatase, subfamily IIIB, AphA GO:0003993|GO:0030288 KEGG: 00740+3.1.3.2|MetaCyc: PWY-6348 AM393_RS23695 1067974b3d24f232079e4f1966ea2ec3 263 SUPERFAMILY SSF52540 1 236 3.47E-77 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS23695 1067974b3d24f232079e4f1966ea2ec3 263 SMART SM00382 28 245 2.1E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS23695 1067974b3d24f232079e4f1966ea2ec3 263 Gene3D G3DSA:3.40.50.300 1 252 1.5E-75 T 28-03-2018 AM393_RS23695 1067974b3d24f232079e4f1966ea2ec3 263 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS23695 1067974b3d24f232079e4f1966ea2ec3 263 Pfam PF00005 ABC transporter 19 167 3.6E-34 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS01875 a738197c653cf094a8f2f52f4b3e08cd 424 PRINTS PR00173 Glutamate-aspartate symporter signature 5 25 1.9E-42 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM393_RS01875 a738197c653cf094a8f2f52f4b3e08cd 424 PRINTS PR00173 Glutamate-aspartate symporter signature 331 350 1.9E-42 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM393_RS01875 a738197c653cf094a8f2f52f4b3e08cd 424 PRINTS PR00173 Glutamate-aspartate symporter signature 81 106 1.9E-42 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM393_RS01875 a738197c653cf094a8f2f52f4b3e08cd 424 PRINTS PR00173 Glutamate-aspartate symporter signature 296 322 1.9E-42 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM393_RS01875 a738197c653cf094a8f2f52f4b3e08cd 424 PRINTS PR00173 Glutamate-aspartate symporter signature 358 378 1.9E-42 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM393_RS01875 a738197c653cf094a8f2f52f4b3e08cd 424 PRINTS PR00173 Glutamate-aspartate symporter signature 51 71 1.9E-42 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM393_RS01875 a738197c653cf094a8f2f52f4b3e08cd 424 PRINTS PR00173 Glutamate-aspartate symporter signature 148 170 1.9E-42 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM393_RS01875 a738197c653cf094a8f2f52f4b3e08cd 424 PRINTS PR00173 Glutamate-aspartate symporter signature 196 215 1.9E-42 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM393_RS01875 a738197c653cf094a8f2f52f4b3e08cd 424 Gene3D G3DSA:1.10.3860.10 1 411 8.9E-101 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM393_RS01875 a738197c653cf094a8f2f52f4b3e08cd 424 Pfam PF00375 Sodium:dicarboxylate symporter family 7 403 2.0E-97 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM393_RS01875 a738197c653cf094a8f2f52f4b3e08cd 424 SUPERFAMILY SSF118215 7 404 1.96E-101 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM393_RS15330 33a40b16c9405668e24fa95dfc0ef53b 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 12 185 1.1E-80 T 28-03-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 AM393_RS15330 33a40b16c9405668e24fa95dfc0ef53b 185 SUPERFAMILY SSF55194 2 184 2.62E-71 T 28-03-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 AM393_RS15330 33a40b16c9405668e24fa95dfc0ef53b 185 Pfam PF01765 Ribosome recycling factor 20 183 4.4E-63 T 28-03-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 AM393_RS15330 33a40b16c9405668e24fa95dfc0ef53b 185 Gene3D G3DSA:1.10.132.20 75 184 1.5E-36 T 28-03-2018 AM393_RS15330 33a40b16c9405668e24fa95dfc0ef53b 185 Gene3D G3DSA:1.10.132.20 2 74 1.2E-9 T 28-03-2018 AM393_RS15330 33a40b16c9405668e24fa95dfc0ef53b 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 27.586 T 28-03-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 AM393_RS17985 3bc2bc0997133d89b8a5fd9f902f62ff 402 Pfam PF11806 Domain of unknown function (DUF3327) 26 157 1.4E-43 T 28-03-2018 IPR021764 Enterochelin esterase, N-terminal GO:0005506|GO:0005737|GO:0006826|GO:0008849 AM393_RS17985 3bc2bc0997133d89b8a5fd9f902f62ff 402 SUPERFAMILY SSF53474 161 396 2.22E-44 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AM393_RS17985 3bc2bc0997133d89b8a5fd9f902f62ff 402 Gene3D G3DSA:2.60.40.10 2 144 3.4E-41 T 28-03-2018 IPR013783 Immunoglobulin-like fold AM393_RS17985 3bc2bc0997133d89b8a5fd9f902f62ff 402 SUPERFAMILY SSF81296 4 152 8.68E-45 T 28-03-2018 IPR014756 Immunoglobulin E-set AM393_RS17985 3bc2bc0997133d89b8a5fd9f902f62ff 402 Pfam PF00756 Putative esterase 174 393 2.7E-38 T 28-03-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 AM393_RS17985 3bc2bc0997133d89b8a5fd9f902f62ff 402 Gene3D G3DSA:3.40.50.1820 147 401 1.1E-34 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AM393_RS19095 0017bd46c4bb136f3463860256294733 414 Hamap MF_01917 Cardiolipin synthase B [clsB]. 2 384 51.738 T 28-03-2018 IPR030872 Cardiolipin synthase B GO:0008808|GO:0032049 AM393_RS19095 0017bd46c4bb136f3463860256294733 414 SUPERFAMILY SSF56024 4 173 1.14E-38 T 28-03-2018 AM393_RS19095 0017bd46c4bb136f3463860256294733 414 SMART SM00155 108 135 3.9E-7 T 28-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AM393_RS19095 0017bd46c4bb136f3463860256294733 414 SMART SM00155 286 313 8.4 T 28-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AM393_RS19095 0017bd46c4bb136f3463860256294733 414 Gene3D G3DSA:3.30.870.10 2 185 1.1E-27 T 28-03-2018 AM393_RS19095 0017bd46c4bb136f3463860256294733 414 Gene3D G3DSA:3.30.870.10 195 361 3.1E-28 T 28-03-2018 AM393_RS19095 0017bd46c4bb136f3463860256294733 414 Pfam PF13091 PLD-like domain 26 152 3.6E-13 T 28-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 AM393_RS19095 0017bd46c4bb136f3463860256294733 414 Pfam PF13091 PLD-like domain 215 337 1.1E-24 T 28-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 AM393_RS19095 0017bd46c4bb136f3463860256294733 414 SUPERFAMILY SSF56024 188 359 4.71E-37 T 28-03-2018 AM393_RS16470 2200bba3a19df7406660b87de07e30b7 432 Gene3D G3DSA:3.30.70.1050 1 118 1.8E-34 T 28-03-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 AM393_RS16470 2200bba3a19df7406660b87de07e30b7 432 PIRSF PIRSF003095 1 432 4.4E-131 T 28-03-2018 IPR005215 Trigger factor GO:0015031 AM393_RS16470 2200bba3a19df7406660b87de07e30b7 432 SUPERFAMILY SSF109998 248 429 1.7E-47 T 28-03-2018 IPR027304 Trigger factor/SurA domain AM393_RS16470 2200bba3a19df7406660b87de07e30b7 432 Pfam PF05697 Bacterial trigger factor protein (TF) 1 144 1.9E-42 T 28-03-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 AM393_RS16470 2200bba3a19df7406660b87de07e30b7 432 TIGRFAM TIGR00115 tig: trigger factor 13 412 4.7E-144 T 28-03-2018 IPR005215 Trigger factor GO:0015031 AM393_RS16470 2200bba3a19df7406660b87de07e30b7 432 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 160 232 5.6E-14 T 28-03-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AM393_RS16470 2200bba3a19df7406660b87de07e30b7 432 SUPERFAMILY SSF102735 1 131 2.75E-39 T 28-03-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 AM393_RS16470 2200bba3a19df7406660b87de07e30b7 432 Gene3D G3DSA:1.10.3120.10 211 389 2.8E-47 T 28-03-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 AM393_RS16470 2200bba3a19df7406660b87de07e30b7 432 SUPERFAMILY SSF54534 96 241 5.3E-38 T 28-03-2018 AM393_RS16470 2200bba3a19df7406660b87de07e30b7 432 Hamap MF_00303 Trigger factor [tig]. 1 418 22.148 T 28-03-2018 IPR005215 Trigger factor GO:0015031 AM393_RS16470 2200bba3a19df7406660b87de07e30b7 432 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 262 412 1.0E-40 T 28-03-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 AM393_RS09385 5f6bcd4c22b8fa00dc1c75006a89aa14 539 SUPERFAMILY SSF52540 360 519 1.7E-30 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS09385 5f6bcd4c22b8fa00dc1c75006a89aa14 539 SUPERFAMILY SSF52540 22 228 4.19E-34 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS09385 5f6bcd4c22b8fa00dc1c75006a89aa14 539 SMART SM00382 366 521 5.2E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS09385 5f6bcd4c22b8fa00dc1c75006a89aa14 539 SMART SM00382 34 220 1.0E-7 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS09385 5f6bcd4c22b8fa00dc1c75006a89aa14 539 Gene3D G3DSA:3.40.50.300 5 279 6.9E-37 T 28-03-2018 AM393_RS09385 5f6bcd4c22b8fa00dc1c75006a89aa14 539 Gene3D G3DSA:3.40.50.300 293 525 2.5E-32 T 28-03-2018 AM393_RS09385 5f6bcd4c22b8fa00dc1c75006a89aa14 539 Pfam PF00005 ABC transporter 362 487 9.3E-16 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS09385 5f6bcd4c22b8fa00dc1c75006a89aa14 539 Pfam PF00005 ABC transporter 36 175 5.3E-16 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS09385 5f6bcd4c22b8fa00dc1c75006a89aa14 539 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS14450 ba5b0e13f57db8a87ec31eb2dc871f44 166 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 101 116 9.1E-20 T 28-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 AM393_RS14450 ba5b0e13f57db8a87ec31eb2dc871f44 166 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 53 61 9.1E-20 T 28-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 AM393_RS14450 ba5b0e13f57db8a87ec31eb2dc871f44 166 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 137 153 9.1E-20 T 28-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 AM393_RS14450 ba5b0e13f57db8a87ec31eb2dc871f44 166 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 7 162 16.665 T 28-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 AM393_RS14450 ba5b0e13f57db8a87ec31eb2dc871f44 166 TIGRFAM TIGR00077 lspA: signal peptidase II 1 163 2.8E-58 T 28-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 AM393_RS14450 ba5b0e13f57db8a87ec31eb2dc871f44 166 ProSitePatterns PS00855 Signal peptidases II signature. 104 116 - T 28-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 AM393_RS14450 ba5b0e13f57db8a87ec31eb2dc871f44 166 Pfam PF01252 Signal peptidase (SPase) II 16 155 1.9E-36 T 28-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 AM393_RS08185 263d8ff591e74418d5f1caf82b26bb20 141 SMART SM00422 2 71 1.9E-32 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM393_RS08185 263d8ff591e74418d5f1caf82b26bb20 141 TIGRFAM TIGR02043 ZntR: Zn(II)-responsive transcriptional regulator 1 131 6.3E-64 T 28-03-2018 IPR011788 Zn(II)-responsive transcriptional regulator GO:0003677|GO:0006351|GO:0008270 AM393_RS08185 263d8ff591e74418d5f1caf82b26bb20 141 Gene3D G3DSA:1.10.1660.10 1 57 1.2E-23 T 28-03-2018 AM393_RS08185 263d8ff591e74418d5f1caf82b26bb20 141 SUPERFAMILY SSF46955 2 121 3.48E-35 T 28-03-2018 IPR009061 Putative DNA-binding domain AM393_RS08185 263d8ff591e74418d5f1caf82b26bb20 141 Gene3D G3DSA:1.10.1660.10 58 139 2.5E-25 T 28-03-2018 AM393_RS08185 263d8ff591e74418d5f1caf82b26bb20 141 Pfam PF13411 MerR HTH family regulatory protein 2 69 6.4E-21 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM393_RS08185 263d8ff591e74418d5f1caf82b26bb20 141 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 58 6.1E-12 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM393_RS08185 263d8ff591e74418d5f1caf82b26bb20 141 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 27 6.1E-12 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM393_RS08185 263d8ff591e74418d5f1caf82b26bb20 141 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 3 14 6.1E-12 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM393_RS08185 263d8ff591e74418d5f1caf82b26bb20 141 ProSitePatterns PS00552 MerR-type HTH domain signature. 5 27 - T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM393_RS07970 3ced37afdfc7778ab1261c9f6681e921 118 TIGRFAM TIGR01558 sm_term_P27: putative phage terminase, small subunit, P27 family 6 111 4.6E-19 T 28-03-2018 IPR006448 Putative phage terminase, small subunit, P27 family AM393_RS07970 3ced37afdfc7778ab1261c9f6681e921 118 Pfam PF05119 Phage terminase, small subunit 15 110 9.5E-21 T 28-03-2018 IPR006448 Putative phage terminase, small subunit, P27 family AM393_RS13160 704b738c223ea3743dda8a0f1129a477 94 SUPERFAMILY SSF143011 1 83 6.28E-21 T 28-03-2018 IPR035095 Toxin RelE-like domain AM393_RS13160 704b738c223ea3743dda8a0f1129a477 94 Gene3D G3DSA:3.30.2310.20 1 94 6.6E-23 T 28-03-2018 AM393_RS13160 704b738c223ea3743dda8a0f1129a477 94 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 5 82 4.4E-7 T 28-03-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family AM393_RS13160 704b738c223ea3743dda8a0f1129a477 94 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 5 83 8.7E-11 T 28-03-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family AM393_RS12280 1d09b3e5c6bea0944db1e97e5ba3b022 179 Pfam PF00419 Fimbrial protein 30 178 4.2E-13 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM393_RS12280 1d09b3e5c6bea0944db1e97e5ba3b022 179 SUPERFAMILY SSF49401 29 178 1.34E-28 T 28-03-2018 IPR008966 Adhesion domain AM393_RS12280 1d09b3e5c6bea0944db1e97e5ba3b022 179 Gene3D G3DSA:2.60.40.1090 28 179 7.2E-30 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM393_RS16485 2f8bf701fc31a4369f21e17b401fa18e 784 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 570 772 6.4E-98 T 28-03-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 AM393_RS16485 2f8bf701fc31a4369f21e17b401fa18e 784 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 676 684 - T 28-03-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 AM393_RS16485 2f8bf701fc31a4369f21e17b401fa18e 784 PIRSF PIRSF001174 1 775 0.0 T 28-03-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 AM393_RS16485 2f8bf701fc31a4369f21e17b401fa18e 784 Gene3D G3DSA:3.40.50.300 313 490 8.4E-30 T 28-03-2018 AM393_RS16485 2f8bf701fc31a4369f21e17b401fa18e 784 Hamap MF_01973 Lon protease [lon]. 11 772 72.364 T 28-03-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 AM393_RS16485 2f8bf701fc31a4369f21e17b401fa18e 784 SUPERFAMILY SSF52540 313 587 5.04E-51 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS16485 2f8bf701fc31a4369f21e17b401fa18e 784 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 10 201 1.8E-42 T 28-03-2018 IPR003111 Lon, substrate-binding domain AM393_RS16485 2f8bf701fc31a4369f21e17b401fa18e 784 Gene3D G3DSA:2.30.130.40 1 118 2.1E-31 T 28-03-2018 AM393_RS16485 2f8bf701fc31a4369f21e17b401fa18e 784 Gene3D G3DSA:1.10.8.60 491 584 3.6E-33 T 28-03-2018 AM393_RS16485 2f8bf701fc31a4369f21e17b401fa18e 784 SUPERFAMILY SSF88697 10 201 5.22E-52 T 28-03-2018 IPR015947 PUA-like domain AM393_RS16485 2f8bf701fc31a4369f21e17b401fa18e 784 SMART SM00382 348 492 5.0E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS16485 2f8bf701fc31a4369f21e17b401fa18e 784 Gene3D G3DSA:1.10.4060.10 122 211 2.1E-31 T 28-03-2018 AM393_RS16485 2f8bf701fc31a4369f21e17b401fa18e 784 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 352 489 1.5E-17 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AM393_RS16485 2f8bf701fc31a4369f21e17b401fa18e 784 Gene3D G3DSA:3.30.230.10 585 772 4.7E-70 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AM393_RS16485 2f8bf701fc31a4369f21e17b401fa18e 784 SUPERFAMILY SSF54211 595 771 2.66E-59 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM393_RS16485 2f8bf701fc31a4369f21e17b401fa18e 784 TIGRFAM TIGR00763 lon: endopeptidase La 12 771 0.0 T 28-03-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 AM393_RS16485 2f8bf701fc31a4369f21e17b401fa18e 784 SMART SM00464 10 202 2.8E-87 T 28-03-2018 IPR003111 Lon, substrate-binding domain AM393_RS16485 2f8bf701fc31a4369f21e17b401fa18e 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 356 375 2.5E-57 T 28-03-2018 AM393_RS16485 2f8bf701fc31a4369f21e17b401fa18e 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 726 744 2.5E-57 T 28-03-2018 AM393_RS16485 2f8bf701fc31a4369f21e17b401fa18e 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 595 611 2.5E-57 T 28-03-2018 AM393_RS16485 2f8bf701fc31a4369f21e17b401fa18e 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 673 692 2.5E-57 T 28-03-2018 AM393_RS16485 2f8bf701fc31a4369f21e17b401fa18e 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 703 722 2.5E-57 T 28-03-2018 AM393_RS14570 49b2a8b6010ce4af7f3393bdb8927554 621 Pfam PF02254 TrkA-N domain 402 512 5.8E-24 T 28-03-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AM393_RS14570 49b2a8b6010ce4af7f3393bdb8927554 621 Gene3D G3DSA:1.20.91.10 232 310 8.3E-12 T 28-03-2018 AM393_RS14570 49b2a8b6010ce4af7f3393bdb8927554 621 PRINTS PR00335 TrkA potassium uptake protein signature 447 457 3.1E-8 T 28-03-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 AM393_RS14570 49b2a8b6010ce4af7f3393bdb8927554 621 PRINTS PR00335 TrkA potassium uptake protein signature 418 432 3.1E-8 T 28-03-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 AM393_RS14570 49b2a8b6010ce4af7f3393bdb8927554 621 PRINTS PR00335 TrkA potassium uptake protein signature 458 468 3.1E-8 T 28-03-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 AM393_RS14570 49b2a8b6010ce4af7f3393bdb8927554 621 PRINTS PR00335 TrkA potassium uptake protein signature 401 415 3.1E-8 T 28-03-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 AM393_RS14570 49b2a8b6010ce4af7f3393bdb8927554 621 SUPERFAMILY SSF51735 401 529 2.79E-31 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS14570 49b2a8b6010ce4af7f3393bdb8927554 621 Hamap MF_01413 Glutathione-regulated potassium-efflux system protein KefC [kefC]. 1 608 57.866 T 28-03-2018 IPR023941 Glutathione-regulated potassium-efflux system protein KefC GO:0005887|GO:0006813|GO:0015503|GO:0015643|GO:0019899|GO:0051595 AM393_RS14570 49b2a8b6010ce4af7f3393bdb8927554 621 Gene3D G3DSA:3.40.50.720 396 561 2.2E-22 T 28-03-2018 AM393_RS14570 49b2a8b6010ce4af7f3393bdb8927554 621 Pfam PF00999 Sodium/hydrogen exchanger family 11 374 4.5E-61 T 28-03-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AM393_RS14570 49b2a8b6010ce4af7f3393bdb8927554 621 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 14 285 9.6E-92 T 28-03-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 AM393_RS01450 be36a2e449f05dbd23c5b1ad809d3865 234 Pfam PF16925 Bacterial transcriptional repressor C-terminal 98 211 1.6E-46 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AM393_RS01450 be36a2e449f05dbd23c5b1ad809d3865 234 Pfam PF00440 Bacterial regulatory proteins, tetR family 31 72 4.8E-8 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM393_RS01450 be36a2e449f05dbd23c5b1ad809d3865 234 SUPERFAMILY SSF46689 17 94 3.23E-13 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS01450 be36a2e449f05dbd23c5b1ad809d3865 234 Gene3D G3DSA:1.10.357.10 76 210 3.9E-24 T 28-03-2018 AM393_RS01450 be36a2e449f05dbd23c5b1ad809d3865 234 Gene3D G3DSA:1.10.10.60 9 75 1.1E-12 T 28-03-2018 AM393_RS01450 be36a2e449f05dbd23c5b1ad809d3865 234 SUPERFAMILY SSF48498 98 208 2.57E-25 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AM393_RS19245 c83b63e137689135b9fa07dc4d6e96da 157 SMART SM00529 56 154 5.9E-38 T 28-03-2018 IPR022689 Iron dependent repressor GO:0003700|GO:0006355|GO:0046914 AM393_RS19245 c83b63e137689135b9fa07dc4d6e96da 157 Pfam PF02742 Iron dependent repressor, metal binding and dimerisation domain 95 148 2.1E-13 T 28-03-2018 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 AM393_RS19245 c83b63e137689135b9fa07dc4d6e96da 157 Pfam PF01325 Iron dependent repressor, N-terminal DNA binding domain 38 91 1.2E-9 T 28-03-2018 IPR022687 DTXR-type HTH domain GO:0003677 AM393_RS19245 c83b63e137689135b9fa07dc4d6e96da 157 Gene3D G3DSA:1.10.10.10 25 102 1.8E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS19245 c83b63e137689135b9fa07dc4d6e96da 157 SUPERFAMILY SSF46785 37 94 5.3E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS19245 c83b63e137689135b9fa07dc4d6e96da 157 SUPERFAMILY SSF47979 95 150 2.75E-14 T 28-03-2018 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 AM393_RS19245 c83b63e137689135b9fa07dc4d6e96da 157 Gene3D G3DSA:1.10.60.10 103 149 1.1E-19 T 28-03-2018 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 AM393_RS12145 c68286ae0eae46d0b068380aba3b5873 526 Gene3D G3DSA:1.10.530.10 318 488 3.0E-31 T 28-03-2018 AM393_RS12145 c68286ae0eae46d0b068380aba3b5873 526 SUPERFAMILY SSF53955 332 486 3.75E-35 T 28-03-2018 IPR023346 Lysozyme-like domain AM393_RS12145 c68286ae0eae46d0b068380aba3b5873 526 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 114 302 1.5E-23 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM393_RS12145 c68286ae0eae46d0b068380aba3b5873 526 Gene3D G3DSA:3.40.190.10 62 210 1.2E-26 T 28-03-2018 AM393_RS12145 c68286ae0eae46d0b068380aba3b5873 526 SMART SM00062 67 314 4.5E-18 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM393_RS12145 c68286ae0eae46d0b068380aba3b5873 526 Pfam PF01464 Transglycosylase SLT domain 335 445 7.0E-16 T 28-03-2018 IPR008258 Transglycosylase SLT domain 1 AM393_RS12145 c68286ae0eae46d0b068380aba3b5873 526 SUPERFAMILY SSF53850 67 302 2.59E-31 T 28-03-2018 AM393_RS12145 c68286ae0eae46d0b068380aba3b5873 526 Gene3D G3DSA:3.40.190.10 217 317 0.21 T 28-03-2018 AM393_RS19640 f02ca5c9a45c346372d1618a76d93cd7 875 Gene3D G3DSA:1.20.5.1230 452 723 8.4E-20 T 28-03-2018 AM393_RS19640 f02ca5c9a45c346372d1618a76d93cd7 875 Pfam PF10145 Phage-related minor tail protein 243 448 3.1E-19 T 28-03-2018 IPR010090 Phage tail tape measure protein AM393_RS19640 f02ca5c9a45c346372d1618a76d93cd7 875 Gene3D G3DSA:1.20.58.60 10 129 0.026 T 28-03-2018 AM393_RS19640 f02ca5c9a45c346372d1618a76d93cd7 875 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 200 554 1.3E-54 T 28-03-2018 IPR010090 Phage tail tape measure protein AM393_RS00445 2438b21594d2be1ec72263acfe9ba76f 69 SMART SM00357 5 69 9.3E-31 T 28-03-2018 IPR011129 Cold shock domain GO:0003676 AM393_RS00445 2438b21594d2be1ec72263acfe9ba76f 69 SUPERFAMILY SSF50249 3 68 3.26E-26 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM393_RS00445 2438b21594d2be1ec72263acfe9ba76f 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 17 36 - T 28-03-2018 IPR019844 Cold-shock conserved site AM393_RS00445 2438b21594d2be1ec72263acfe9ba76f 69 PIRSF PIRSF002599 1 69 8.7E-26 T 28-03-2018 IPR012156 Cold shock, CspA GO:0003676 AM393_RS00445 2438b21594d2be1ec72263acfe9ba76f 69 PRINTS PR00050 Cold shock protein signature 42 60 1.1E-18 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM393_RS00445 2438b21594d2be1ec72263acfe9ba76f 69 PRINTS PR00050 Cold shock protein signature 27 36 1.1E-18 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM393_RS00445 2438b21594d2be1ec72263acfe9ba76f 69 PRINTS PR00050 Cold shock protein signature 6 21 1.1E-18 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM393_RS00445 2438b21594d2be1ec72263acfe9ba76f 69 Pfam PF00313 'Cold-shock' DNA-binding domain 5 68 3.0E-33 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM393_RS00445 2438b21594d2be1ec72263acfe9ba76f 69 Gene3D G3DSA:2.40.50.140 4 69 7.0E-30 T 28-03-2018 AM393_RS14745 73f9579220bac01de4a0f7e103d41347 677 Gene3D G3DSA:3.20.20.70 1 381 3.0E-111 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM393_RS14745 73f9579220bac01de4a0f7e103d41347 677 SUPERFAMILY SSF51395 3 355 3.42E-102 T 28-03-2018 AM393_RS14745 73f9579220bac01de4a0f7e103d41347 677 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 7 337 9.8E-74 T 28-03-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 AM393_RS14745 73f9579220bac01de4a0f7e103d41347 677 Gene3D G3DSA:3.50.50.60 488 626 4.0E-20 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS14745 73f9579220bac01de4a0f7e103d41347 677 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 385 619 4.3E-24 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS14745 73f9579220bac01de4a0f7e103d41347 677 SUPERFAMILY SSF51905 473 637 1.68E-14 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS14745 73f9579220bac01de4a0f7e103d41347 677 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 385 407 1.0E-5 T 28-03-2018 AM393_RS14745 73f9579220bac01de4a0f7e103d41347 677 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 418 433 1.0E-5 T 28-03-2018 AM393_RS14745 73f9579220bac01de4a0f7e103d41347 677 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 469 487 6.7E-13 T 28-03-2018 AM393_RS14745 73f9579220bac01de4a0f7e103d41347 677 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 519 537 6.7E-13 T 28-03-2018 AM393_RS14745 73f9579220bac01de4a0f7e103d41347 677 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 386 405 6.7E-13 T 28-03-2018 AM393_RS14745 73f9579220bac01de4a0f7e103d41347 677 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 602 618 6.7E-13 T 28-03-2018 AM393_RS14745 73f9579220bac01de4a0f7e103d41347 677 SUPERFAMILY SSF51971 341 547 1.53E-28 T 28-03-2018 AM393_RS14745 73f9579220bac01de4a0f7e103d41347 677 Gene3D G3DSA:3.40.50.720 382 487 1.6E-13 T 28-03-2018 AM393_RS23750 6fa80b8b82886f90438262be4ed11f42 384 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 292 308 1.7E-17 T 28-03-2018 AM393_RS23750 6fa80b8b82886f90438262be4ed11f42 384 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 277 292 1.7E-17 T 28-03-2018 AM393_RS23750 6fa80b8b82886f90438262be4ed11f42 384 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 2 24 1.7E-17 T 28-03-2018 AM393_RS23750 6fa80b8b82886f90438262be4ed11f42 384 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 146 161 1.7E-17 T 28-03-2018 AM393_RS23750 6fa80b8b82886f90438262be4ed11f42 384 SUPERFAMILY SSF51905 1 167 3.42E-56 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS23750 6fa80b8b82886f90438262be4ed11f42 384 SUPERFAMILY SSF51905 264 355 3.42E-56 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS23750 6fa80b8b82886f90438262be4ed11f42 384 Gene3D G3DSA:3.50.50.60 1 373 1.4E-44 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS23750 6fa80b8b82886f90438262be4ed11f42 384 Pfam PF01494 FAD binding domain 2 337 3.4E-20 T 28-03-2018 IPR002938 FAD-binding domain GO:0071949 AM393_RS02770 c176b1975e1042af93bfea837a99fff2 209 Pfam PF02798 Glutathione S-transferase, N-terminal domain 4 81 4.7E-13 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AM393_RS02770 c176b1975e1042af93bfea837a99fff2 209 Gene3D G3DSA:1.20.1050.10 103 209 7.1E-28 T 28-03-2018 AM393_RS02770 c176b1975e1042af93bfea837a99fff2 209 Gene3D G3DSA:3.40.30.10 1 102 5.8E-27 T 28-03-2018 AM393_RS02770 c176b1975e1042af93bfea837a99fff2 209 Pfam PF13410 Glutathione S-transferase, C-terminal domain 128 192 1.4E-10 T 28-03-2018 AM393_RS02770 c176b1975e1042af93bfea837a99fff2 209 SUPERFAMILY SSF52833 1 84 3.46E-21 T 28-03-2018 IPR012336 Thioredoxin-like fold AM393_RS02770 c176b1975e1042af93bfea837a99fff2 209 SUPERFAMILY SSF47616 78 203 1.17E-35 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like AM393_RS21745 228c36bd83597a9d34593857779cae31 245 SUPERFAMILY SSF51366 14 240 3.05E-78 T 28-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AM393_RS21745 228c36bd83597a9d34593857779cae31 245 Gene3D G3DSA:3.20.20.70 11 242 2.2E-70 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM393_RS21745 228c36bd83597a9d34593857779cae31 245 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 17 237 7.3E-55 T 28-03-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AM393_RS21745 228c36bd83597a9d34593857779cae31 245 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 15 237 2.1E-51 T 28-03-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AM393_RS21745 228c36bd83597a9d34593857779cae31 245 SMART SM00934 16 237 7.5E-101 T 28-03-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AM393_RS21745 228c36bd83597a9d34593857779cae31 245 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 68 81 - T 28-03-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AM393_RS21745 228c36bd83597a9d34593857779cae31 245 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 14 242 39.958 T 28-03-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AM393_RS20005 e6f05577c9d09dfe09f3faa1d6f1f174 326 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 13 318 3.2E-114 T 28-03-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130 AM393_RS20005 e6f05577c9d09dfe09f3faa1d6f1f174 326 SUPERFAMILY SSF52540 46 162 4.06E-12 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS20005 e6f05577c9d09dfe09f3faa1d6f1f174 326 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 19 312 8.3E-112 T 28-03-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130 AM393_RS20005 e6f05577c9d09dfe09f3faa1d6f1f174 326 Gene3D G3DSA:3.40.50.300 32 297 1.7E-8 T 28-03-2018 AM393_RS20005 e6f05577c9d09dfe09f3faa1d6f1f174 326 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 1 325 40.553 T 28-03-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130 AM393_RS27780 3d01aa2664e1b7a046c8133877591fa7 583 Pfam PF01526 Tn3 transposase DDE domain 175 561 6.3E-155 T 28-03-2018 IPR002513 Tn3 transposase DDE domain GO:0004803|GO:0006313 AM393_RS19255 035c8bd3d706a1519a8bb116e18d9c42 458 PRINTS PR00131 Glycosyl hydrolase family 1 signature 374 385 1.4E-12 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AM393_RS19255 035c8bd3d706a1519a8bb116e18d9c42 458 PRINTS PR00131 Glycosyl hydrolase family 1 signature 353 361 1.4E-12 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AM393_RS19255 035c8bd3d706a1519a8bb116e18d9c42 458 PRINTS PR00131 Glycosyl hydrolase family 1 signature 396 413 1.4E-12 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AM393_RS19255 035c8bd3d706a1519a8bb116e18d9c42 458 PRINTS PR00131 Glycosyl hydrolase family 1 signature 285 299 1.4E-12 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AM393_RS19255 035c8bd3d706a1519a8bb116e18d9c42 458 PRINTS PR00131 Glycosyl hydrolase family 1 signature 420 432 1.4E-12 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AM393_RS19255 035c8bd3d706a1519a8bb116e18d9c42 458 Pfam PF00232 Glycosyl hydrolase family 1 2 455 1.6E-116 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AM393_RS19255 035c8bd3d706a1519a8bb116e18d9c42 458 SUPERFAMILY SSF51445 2 455 6.22E-131 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily AM393_RS19255 035c8bd3d706a1519a8bb116e18d9c42 458 Gene3D G3DSA:3.20.20.80 2 458 1.5E-122 T 28-03-2018 AM393_RS11015 2eab6a08554eb516426f5d9f2320a07f 810 Pfam PF00742 Homoserine dehydrogenase 608 803 3.4E-43 T 28-03-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 AM393_RS11015 2eab6a08554eb516426f5d9f2320a07f 810 PIRSF PIRSF000727 12 810 8.5E-296 T 28-03-2018 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+2.7.2.4+1.1.1.3|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4+1.1.1.3|KEGG: 00300+2.7.2.4+1.1.1.3|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AM393_RS11015 2eab6a08554eb516426f5d9f2320a07f 810 Pfam PF00696 Amino acid kinase family 12 284 3.0E-44 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase AM393_RS11015 2eab6a08554eb516426f5d9f2320a07f 810 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 654 676 - T 28-03-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 AM393_RS11015 2eab6a08554eb516426f5d9f2320a07f 810 Gene3D G3DSA:3.40.50.720 455 629 3.6E-23 T 28-03-2018 AM393_RS11015 2eab6a08554eb516426f5d9f2320a07f 810 SUPERFAMILY SSF51735 457 630 3.68E-32 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS11015 2eab6a08554eb516426f5d9f2320a07f 810 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 15 453 3.0E-65 T 28-03-2018 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AM393_RS11015 2eab6a08554eb516426f5d9f2320a07f 810 Gene3D G3DSA:3.40.1160.10 9 313 1.3E-49 T 28-03-2018 AM393_RS11015 2eab6a08554eb516426f5d9f2320a07f 810 SUPERFAMILY SSF55347 608 791 1.05E-46 T 28-03-2018 AM393_RS11015 2eab6a08554eb516426f5d9f2320a07f 810 SUPERFAMILY SSF53633 12 299 6.41E-58 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase AM393_RS11015 2eab6a08554eb516426f5d9f2320a07f 810 ProSitePatterns PS00324 Aspartokinase signature. 14 22 - T 28-03-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AM393_RS11015 2eab6a08554eb516426f5d9f2320a07f 810 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 465 600 9.1E-25 T 28-03-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 AM393_RS11015 2eab6a08554eb516426f5d9f2320a07f 810 Gene3D G3DSA:3.30.360.10 630 787 2.7E-50 T 28-03-2018 AM393_RS05140 468d007451f5000bcb82ee7f642166d9 181 Gene3D G3DSA:3.40.50.300 2 181 4.6E-63 T 28-03-2018 AM393_RS05140 468d007451f5000bcb82ee7f642166d9 181 SUPERFAMILY SSF52540 2 181 3.43E-55 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS05140 468d007451f5000bcb82ee7f642166d9 181 PIRSF PIRSF006135 1 181 5.2E-62 T 28-03-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00030+2.7.1.15|KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 AM393_RS05140 468d007451f5000bcb82ee7f642166d9 181 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 3 180 1.7E-61 T 28-03-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00030+2.7.1.15|KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 AM393_RS16060 bb38e4e0196946abed800447032cb560 177 Gene3D G3DSA:3.40.50.850 1 177 2.9E-34 T 28-03-2018 AM393_RS16060 bb38e4e0196946abed800447032cb560 177 Pfam PF00857 Isochorismatase family 7 142 4.4E-26 T 28-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AM393_RS16060 bb38e4e0196946abed800447032cb560 177 SUPERFAMILY SSF52499 4 154 9.81E-36 T 28-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AM393_RS13150 5af06090cc530bcded668a6ad81d6ffe 636 ProSitePatterns PS00894 DeoR-type HTH domain signature. 7 40 - T 28-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 AM393_RS13150 5af06090cc530bcded668a6ad81d6ffe 636 Gene3D G3DSA:3.40.930.10 490 631 2.2E-22 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 AM393_RS13150 5af06090cc530bcded668a6ad81d6ffe 636 Gene3D G3DSA:1.10.1790.10 277 392 5.8E-21 T 28-03-2018 IPR011608 PRD domain GO:0006355 AM393_RS13150 5af06090cc530bcded668a6ad81d6ffe 636 SUPERFAMILY SSF52794 401 478 3.82E-6 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AM393_RS13150 5af06090cc530bcded668a6ad81d6ffe 636 Pfam PF08279 HTH domain 7 63 7.2E-10 T 28-03-2018 IPR013196 Helix-turn-helix, type 11 AM393_RS13150 5af06090cc530bcded668a6ad81d6ffe 636 Gene3D G3DSA:1.10.10.10 2 68 9.5E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS13150 5af06090cc530bcded668a6ad81d6ffe 636 Gene3D G3DSA:1.10.10.10 87 154 3.0E-9 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS13150 5af06090cc530bcded668a6ad81d6ffe 636 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 502 626 2.0E-18 T 28-03-2018 IPR002178 PTS EIIA type-2 domain AM393_RS13150 5af06090cc530bcded668a6ad81d6ffe 636 SUPERFAMILY SSF63520 294 391 4.84E-22 T 28-03-2018 IPR011608 PRD domain GO:0006355 AM393_RS13150 5af06090cc530bcded668a6ad81d6ffe 636 Gene3D G3DSA:3.40.50.2300 398 483 2.8E-14 T 28-03-2018 AM393_RS13150 5af06090cc530bcded668a6ad81d6ffe 636 Pfam PF05043 Mga helix-turn-helix domain 88 165 4.0E-11 T 28-03-2018 IPR007737 Mga helix-turn-helix domain AM393_RS13150 5af06090cc530bcded668a6ad81d6ffe 636 SUPERFAMILY SSF55804 490 627 7.15E-26 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 AM393_RS13150 5af06090cc530bcded668a6ad81d6ffe 636 Pfam PF00874 PRD domain 300 386 2.3E-19 T 28-03-2018 IPR011608 PRD domain GO:0006355 AM393_RS12820 510cfc68e19ac77efe98825f35da6ef0 334 PIRSF PIRSF005651 1 334 1.0E-108 T 28-03-2018 IPR010200 HflC GO:0016021|GO:0052547 AM393_RS12820 510cfc68e19ac77efe98825f35da6ef0 334 Pfam PF01145 SPFH domain / Band 7 family 22 243 4.5E-34 T 28-03-2018 IPR001107 Band 7 domain AM393_RS12820 510cfc68e19ac77efe98825f35da6ef0 334 SMART SM00244 18 227 5.4E-45 T 28-03-2018 IPR001107 Band 7 domain AM393_RS12820 510cfc68e19ac77efe98825f35da6ef0 334 TIGRFAM TIGR01932 hflC: HflC protein 1 326 2.7E-146 T 28-03-2018 IPR010200 HflC GO:0016021|GO:0052547 AM393_RS12820 510cfc68e19ac77efe98825f35da6ef0 334 SUPERFAMILY SSF117892 56 157 1.14E-16 T 28-03-2018 IPR001107 Band 7 domain AM393_RS12820 510cfc68e19ac77efe98825f35da6ef0 334 SUPERFAMILY SSF117892 189 233 6.02E-8 T 28-03-2018 IPR001107 Band 7 domain AM393_RS01105 7d27252672ba71945c293dfefc340115 119 Gene3D G3DSA:1.10.3470.10 1 99 1.1E-8 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AM393_RS01105 7d27252672ba71945c293dfefc340115 119 SUPERFAMILY SSF81345 2 94 1.22E-11 T 28-03-2018 IPR029022 ABC transporter, BtuC-like AM393_RS01105 7d27252672ba71945c293dfefc340115 119 Pfam PF00950 ABC 3 transport family 2 97 1.8E-24 T 28-03-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 AM393_RS28955 db59596810319f6778038c0cbbe7b191 401 Gene3D G3DSA:3.40.50.300 108 399 3.8E-32 T 28-03-2018 AM393_RS28955 db59596810319f6778038c0cbbe7b191 401 Pfam PF13614 AAA domain 110 278 3.1E-20 T 28-03-2018 IPR025669 AAA domain AM393_RS28955 db59596810319f6778038c0cbbe7b191 401 SUPERFAMILY SSF52540 108 395 1.23E-25 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS21685 6523aaf7d01c2be2d6df919c33c71721 348 Pfam PF08496 Peptidase family S49 N-terminal 2 157 7.1E-59 T 28-03-2018 IPR013703 Peptidase S49, N-terminal proteobacteria GO:0004252|GO:0005886 AM393_RS21685 6523aaf7d01c2be2d6df919c33c71721 348 SUPERFAMILY SSF52096 239 298 2.21E-29 T 28-03-2018 IPR029045 ClpP/crotonase-like domain AM393_RS21685 6523aaf7d01c2be2d6df919c33c71721 348 SUPERFAMILY SSF52096 99 208 2.21E-29 T 28-03-2018 IPR029045 ClpP/crotonase-like domain AM393_RS21685 6523aaf7d01c2be2d6df919c33c71721 348 Pfam PF01343 Peptidase family S49 160 308 4.9E-43 T 28-03-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 AM393_RS21685 6523aaf7d01c2be2d6df919c33c71721 348 Gene3D G3DSA:3.90.226.10 26 306 9.9E-32 T 28-03-2018 AM393_RS20130 9a890d6c0edab222cdcd676e322b9737 263 SUPERFAMILY SSF161098 56 237 4.32E-38 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS20130 9a890d6c0edab222cdcd676e322b9737 263 Gene3D G3DSA:1.10.3720.10 7 254 4.9E-34 T 28-03-2018 AM393_RS20130 9a890d6c0edab222cdcd676e322b9737 263 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 247 2.9E-28 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS16345 e9eb636644e01470c33e26fd66b7b0e6 482 SUPERFAMILY SSF143437 1 173 1.36E-50 T 28-03-2018 AM393_RS16345 e9eb636644e01470c33e26fd66b7b0e6 482 Gene3D G3DSA:3.30.2300.10 84 162 9.0E-21 T 28-03-2018 AM393_RS16345 e9eb636644e01470c33e26fd66b7b0e6 482 Pfam PF02926 THUMP domain 28 161 7.3E-26 T 28-03-2018 IPR004114 THUMP domain GO:0003723 AM393_RS16345 e9eb636644e01470c33e26fd66b7b0e6 482 Gene3D G3DSA:3.40.50.620 175 386 5.7E-28 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM393_RS16345 e9eb636644e01470c33e26fd66b7b0e6 482 SUPERFAMILY SSF52402 174 372 1.32E-41 T 28-03-2018 AM393_RS16345 e9eb636644e01470c33e26fd66b7b0e6 482 TIGRFAM TIGR00342 TIGR00342: tRNA sulfurtransferase ThiI 4 377 6.2E-140 T 28-03-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 AM393_RS16345 e9eb636644e01470c33e26fd66b7b0e6 482 Gene3D G3DSA:3.40.250.10 387 482 3.1E-9 T 28-03-2018 IPR001763 Rhodanese-like domain AM393_RS16345 e9eb636644e01470c33e26fd66b7b0e6 482 SUPERFAMILY SSF52821 407 481 4.24E-8 T 28-03-2018 IPR001763 Rhodanese-like domain AM393_RS16345 e9eb636644e01470c33e26fd66b7b0e6 482 TIGRFAM TIGR04271 ThiI_C_thiazole: thiazole biosynthesis domain 382 482 3.2E-40 T 28-03-2018 IPR026340 Thiazole biosynthesis domain GO:0052837 AM393_RS16345 e9eb636644e01470c33e26fd66b7b0e6 482 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 175 369 4.0E-80 T 28-03-2018 IPR020536 Thil, AANH domain GO:0004810 AM393_RS16345 e9eb636644e01470c33e26fd66b7b0e6 482 SMART SM00981 75 165 4.1E-27 T 28-03-2018 IPR004114 THUMP domain GO:0003723 AM393_RS16345 e9eb636644e01470c33e26fd66b7b0e6 482 Hamap MF_00021 tRNA sulfurtransferase [thiI]. 1 482 232.781 T 28-03-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 AM393_RS16345 e9eb636644e01470c33e26fd66b7b0e6 482 Gene3D G3DSA:3.30.70.1510 2 82 1.3E-22 T 28-03-2018 AM393_RS13005 4b3caa3b097f48ea0a5f416eec42160d 37 Pfam PF12833 Helix-turn-helix domain 1 31 4.3E-8 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM393_RS13005 4b3caa3b097f48ea0a5f416eec42160d 37 Gene3D G3DSA:1.10.10.60 1 36 2.1E-10 T 28-03-2018 AM393_RS13005 4b3caa3b097f48ea0a5f416eec42160d 37 SUPERFAMILY SSF46689 1 33 7.62E-10 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS14890 3ca8e6e5dc4eb6fa40288fad6fedf552 901 SUPERFAMILY SSF52540 416 618 1.54E-57 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS14890 3ca8e6e5dc4eb6fa40288fad6fedf552 901 Gene3D G3DSA:3.40.50.300 417 634 1.3E-53 T 28-03-2018 AM393_RS14890 3ca8e6e5dc4eb6fa40288fad6fedf552 901 SMART SM00958 228 358 1.2E-82 T 28-03-2018 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 AM393_RS14890 3ca8e6e5dc4eb6fa40288fad6fedf552 901 Pfam PF07517 SecA DEAD-like domain 7 402 8.8E-132 T 28-03-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 AM393_RS14890 3ca8e6e5dc4eb6fa40288fad6fedf552 901 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 817 0.0 T 28-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AM393_RS14890 3ca8e6e5dc4eb6fa40288fad6fedf552 901 Pfam PF01043 SecA preprotein cross-linking domain 232 358 1.1E-39 T 28-03-2018 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 AM393_RS14890 3ca8e6e5dc4eb6fa40288fad6fedf552 901 SUPERFAMILY SSF81767 227 368 5.62E-44 T 28-03-2018 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 AM393_RS14890 3ca8e6e5dc4eb6fa40288fad6fedf552 901 SUPERFAMILY SSF52540 368 415 4.23E-84 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS14890 3ca8e6e5dc4eb6fa40288fad6fedf552 901 SUPERFAMILY SSF52540 4 228 4.23E-84 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS14890 3ca8e6e5dc4eb6fa40288fad6fedf552 901 Pfam PF02810 SEC-C motif 881 899 1.1E-10 T 28-03-2018 IPR004027 SEC-C motif AM393_RS14890 3ca8e6e5dc4eb6fa40288fad6fedf552 901 Gene3D G3DSA:3.40.50.300 9 266 2.9E-56 T 28-03-2018 AM393_RS14890 3ca8e6e5dc4eb6fa40288fad6fedf552 901 Gene3D G3DSA:3.40.50.300 301 416 3.9E-8 T 28-03-2018 AM393_RS14890 3ca8e6e5dc4eb6fa40288fad6fedf552 901 Gene3D G3DSA:1.10.3060.10 635 733 2.6E-30 T 28-03-2018 AM393_RS14890 3ca8e6e5dc4eb6fa40288fad6fedf552 901 PRINTS PR00906 SecA protein signature 170 190 1.2E-73 T 28-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AM393_RS14890 3ca8e6e5dc4eb6fa40288fad6fedf552 901 PRINTS PR00906 SecA protein signature 376 393 1.2E-73 T 28-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AM393_RS14890 3ca8e6e5dc4eb6fa40288fad6fedf552 901 PRINTS PR00906 SecA protein signature 63 87 1.2E-73 T 28-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AM393_RS14890 3ca8e6e5dc4eb6fa40288fad6fedf552 901 PRINTS PR00906 SecA protein signature 101 115 1.2E-73 T 28-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AM393_RS14890 3ca8e6e5dc4eb6fa40288fad6fedf552 901 PRINTS PR00906 SecA protein signature 339 361 1.2E-73 T 28-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AM393_RS14890 3ca8e6e5dc4eb6fa40288fad6fedf552 901 PRINTS PR00906 SecA protein signature 117 127 1.2E-73 T 28-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AM393_RS14890 3ca8e6e5dc4eb6fa40288fad6fedf552 901 PRINTS PR00906 SecA protein signature 413 426 1.2E-73 T 28-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AM393_RS14890 3ca8e6e5dc4eb6fa40288fad6fedf552 901 Pfam PF07516 SecA Wing and Scaffold domain 617 830 1.2E-69 T 28-03-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 AM393_RS14890 3ca8e6e5dc4eb6fa40288fad6fedf552 901 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 832 19.92 T 28-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AM393_RS14890 3ca8e6e5dc4eb6fa40288fad6fedf552 901 SMART SM00957 6 402 0.0 T 28-03-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 AM393_RS14890 3ca8e6e5dc4eb6fa40288fad6fedf552 901 ProSitePatterns PS01312 SecA family signature. 500 515 - T 28-03-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 AM393_RS14890 3ca8e6e5dc4eb6fa40288fad6fedf552 901 SUPERFAMILY SSF81886 620 840 6.02E-86 T 28-03-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 AM393_RS14890 3ca8e6e5dc4eb6fa40288fad6fedf552 901 SUPERFAMILY SSF81886 877 889 6.02E-86 T 28-03-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 AM393_RS14890 3ca8e6e5dc4eb6fa40288fad6fedf552 901 Gene3D G3DSA:3.10.450.50 734 901 7.9E-57 T 28-03-2018 AM393_RS16490 d0649e78baf745df41f16cf93b06735d 90 SUPERFAMILY SSF47729 1 90 2.5E-31 T 28-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 AM393_RS16490 d0649e78baf745df41f16cf93b06735d 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 2.8E-32 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AM393_RS16490 d0649e78baf745df41f16cf93b06735d 90 Gene3D G3DSA:4.10.520.10 1 90 2.9E-33 T 28-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 AM393_RS16490 d0649e78baf745df41f16cf93b06735d 90 SMART SM00411 1 90 1.1E-41 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AM393_RS16490 d0649e78baf745df41f16cf93b06735d 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 1.4E-19 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AM393_RS16490 d0649e78baf745df41f16cf93b06735d 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 1.4E-19 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AM393_RS16490 d0649e78baf745df41f16cf93b06735d 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 1.4E-19 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AM393_RS16490 d0649e78baf745df41f16cf93b06735d 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 28-03-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 AM393_RS15310 acbb7960eb072c32762eb76530300923 264 Gene3D G3DSA:3.90.230.10 2 264 2.4E-87 T 28-03-2018 AM393_RS15310 acbb7960eb072c32762eb76530300923 264 SUPERFAMILY SSF55920 3 255 5.1E-91 T 28-03-2018 IPR000994 Peptidase M24 AM393_RS15310 acbb7960eb072c32762eb76530300923 264 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 3 250 9.3E-111 T 28-03-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 AM393_RS15310 acbb7960eb072c32762eb76530300923 264 Hamap MF_01974 Methionine aminopeptidase [map]. 3 251 43.239 T 28-03-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 AM393_RS15310 acbb7960eb072c32762eb76530300923 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 193 205 2.1E-22 T 28-03-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 AM393_RS15310 acbb7960eb072c32762eb76530300923 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 92 108 2.1E-22 T 28-03-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 AM393_RS15310 acbb7960eb072c32762eb76530300923 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 162 174 2.1E-22 T 28-03-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 AM393_RS15310 acbb7960eb072c32762eb76530300923 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 69 82 2.1E-22 T 28-03-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 AM393_RS15310 acbb7960eb072c32762eb76530300923 264 Pfam PF00557 Metallopeptidase family M24 12 242 1.1E-52 T 28-03-2018 IPR000994 Peptidase M24 AM393_RS15310 acbb7960eb072c32762eb76530300923 264 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 168 186 - T 28-03-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 AM393_RS05225 fec2ee5ea8073eb93e2e25c5adfa4afd 458 SUPERFAMILY SSF52317 252 452 8.96E-29 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AM393_RS05225 fec2ee5ea8073eb93e2e25c5adfa4afd 458 Gene3D G3DSA:3.40.50.300 2 185 1.3E-37 T 28-03-2018 AM393_RS05225 fec2ee5ea8073eb93e2e25c5adfa4afd 458 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 8 193 1.7E-22 T 28-03-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain AM393_RS05225 fec2ee5ea8073eb93e2e25c5adfa4afd 458 SUPERFAMILY SSF52540 5 200 2.73E-46 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS05225 fec2ee5ea8073eb93e2e25c5adfa4afd 458 TIGRFAM TIGR00379 cobB: cobyrinic acid a,c-diamide synthase 8 452 9.1E-132 T 28-03-2018 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA GO:0009236|GO:0042242 AM393_RS05225 fec2ee5ea8073eb93e2e25c5adfa4afd 458 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 252 443 9.8E-38 T 28-03-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 AM393_RS05225 fec2ee5ea8073eb93e2e25c5adfa4afd 458 Gene3D G3DSA:3.40.50.880 186 405 1.1E-19 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AM393_RS05225 fec2ee5ea8073eb93e2e25c5adfa4afd 458 Hamap MF_00027 Cobyrinate a,c-diamide synthase [cbiA]. 4 444 41.928 T 28-03-2018 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA GO:0009236|GO:0042242 AM393_RS28970 07c95d6980ed6d30a19809ed8e8b5fb8 143 Pfam PF00717 Peptidase S24-like 59 122 1.8E-12 T 28-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AM393_RS28970 07c95d6980ed6d30a19809ed8e8b5fb8 143 Gene3D G3DSA:2.10.109.10 23 139 1.1E-24 T 28-03-2018 AM393_RS28970 07c95d6980ed6d30a19809ed8e8b5fb8 143 SUPERFAMILY SSF51306 20 137 6.54E-31 T 28-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AM393_RS28970 07c95d6980ed6d30a19809ed8e8b5fb8 143 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 54 64 2.3E-8 T 28-03-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 AM393_RS28970 07c95d6980ed6d30a19809ed8e8b5fb8 143 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 93 105 2.3E-8 T 28-03-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 AM393_RS28970 07c95d6980ed6d30a19809ed8e8b5fb8 143 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 65 76 2.3E-8 T 28-03-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 AM393_RS09775 4f38f8a52f908779d315abca7268daa2 416 PRINTS PR00762 Chloride channel signature 360 376 6.7E-10 T 28-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AM393_RS09775 4f38f8a52f908779d315abca7268daa2 416 PRINTS PR00762 Chloride channel signature 115 134 6.7E-10 T 28-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AM393_RS09775 4f38f8a52f908779d315abca7268daa2 416 PRINTS PR00762 Chloride channel signature 166 185 6.7E-10 T 28-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AM393_RS09775 4f38f8a52f908779d315abca7268daa2 416 SUPERFAMILY SSF81340 11 413 2.09E-69 T 28-03-2018 IPR014743 Chloride channel, core GO:0005216|GO:0055085 Reactome: R-HSA-2672351 AM393_RS09775 4f38f8a52f908779d315abca7268daa2 416 Pfam PF00654 Voltage gated chloride channel 75 411 2.8E-62 T 28-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AM393_RS09775 4f38f8a52f908779d315abca7268daa2 416 Gene3D G3DSA:1.10.3080.10 6 416 5.4E-56 T 28-03-2018 IPR014743 Chloride channel, core GO:0005216|GO:0055085 Reactome: R-HSA-2672351 AM393_RS08845 cdaec0f3d6c5eeb728f16210ae7a2d61 73 Gene3D G3DSA:3.40.1620.10 1 58 5.6E-20 T 28-03-2018 AM393_RS08845 cdaec0f3d6c5eeb728f16210ae7a2d61 73 SUPERFAMILY SSF143120 1 66 5.23E-16 T 28-03-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM AM393_RS08845 cdaec0f3d6c5eeb728f16210ae7a2d61 73 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 50 4.1E-17 T 28-03-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM AM393_RS08845 cdaec0f3d6c5eeb728f16210ae7a2d61 73 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 4 48 1.6E-14 T 28-03-2018 AM393_RS04540 af7010f037099a765427db6be69e594d 136 ProDom PD021295 MATURATION HYDROGENLYASE FORMATE HYCH LYASE HYCE PROCESSING OXIDOREDUCTASE J COMPONENT 1 134 4.0E-66 T 28-03-2018 IPR010005 Formate hydrogenlyase maturation HycH AM393_RS04540 af7010f037099a765427db6be69e594d 136 Pfam PF07450 Formate hydrogenlyase maturation protein HycH 4 133 7.3E-56 T 28-03-2018 IPR010005 Formate hydrogenlyase maturation HycH AM393_RS11755 faedf8ad05caf91a0aa7b0301bae3283 256 Hamap MF_00443 Thiazole synthase [thiG]. 1 253 43.108 T 28-03-2018 IPR008867 Thiazole synthase GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 AM393_RS11755 faedf8ad05caf91a0aa7b0301bae3283 256 Pfam PF05690 Thiazole biosynthesis protein ThiG 4 247 2.5E-109 T 28-03-2018 IPR033983 Thiazole synthase ThiG KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 AM393_RS11755 faedf8ad05caf91a0aa7b0301bae3283 256 Gene3D G3DSA:3.20.20.70 1 256 4.0E-54 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM393_RS11755 faedf8ad05caf91a0aa7b0301bae3283 256 SUPERFAMILY SSF110399 1 235 3.01E-81 T 28-03-2018 AM393_RS09920 f7fd7d9e578d171fb632a6fd4aa5d2b8 155 Pfam PF11578 Protein of unknown function (DUF3237) 3 154 2.3E-34 T 28-03-2018 IPR020915 Uncharacterised protein family UPF0311 AM393_RS09920 f7fd7d9e578d171fb632a6fd4aa5d2b8 155 Hamap MF_00775 UPF0311 protein . 3 155 20.46 T 28-03-2018 IPR020915 Uncharacterised protein family UPF0311 AM393_RS09920 f7fd7d9e578d171fb632a6fd4aa5d2b8 155 Gene3D G3DSA:2.40.160.20 1 155 1.3E-38 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AM393_RS06275 be4a3450d3cb38f7c2476a996bc666c1 315 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 13 87 2.2E-5 T 28-03-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 AM393_RS06275 be4a3450d3cb38f7c2476a996bc666c1 315 SUPERFAMILY SSF56349 5 309 3.24E-35 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AM393_RS06275 be4a3450d3cb38f7c2476a996bc666c1 315 Gene3D G3DSA:1.10.443.10 109 312 3.7E-26 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM393_RS06275 be4a3450d3cb38f7c2476a996bc666c1 315 Gene3D G3DSA:1.10.150.130 2 108 2.2E-15 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal AM393_RS06275 be4a3450d3cb38f7c2476a996bc666c1 315 Pfam PF00589 Phage integrase family 147 301 3.8E-20 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM393_RS21455 14453517f3e0c60e2808682dbde65f28 160 PIRSF PIRSF034445 1 150 2.8E-32 T 28-03-2018 IPR012899 LTXXQ motif family protein GO:0042597 AM393_RS21455 14453517f3e0c60e2808682dbde65f28 160 Pfam PF07813 LTXXQ motif family protein 45 140 3.9E-24 T 28-03-2018 IPR012899 LTXXQ motif family protein GO:0042597 AM393_RS18315 adafcd4883f05b9f32c64126c5275837 633 Pfam PF00905 Penicillin binding protein transpeptidase domain 272 609 7.2E-92 T 28-03-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AM393_RS18315 adafcd4883f05b9f32c64126c5275837 633 Pfam PF03717 Penicillin-binding Protein dimerisation domain 64 239 4.3E-46 T 28-03-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 AM393_RS18315 adafcd4883f05b9f32c64126c5275837 633 SUPERFAMILY SSF56601 254 611 1.58E-93 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AM393_RS18315 adafcd4883f05b9f32c64126c5275837 633 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 19 612 5.8E-239 T 28-03-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0016020 AM393_RS18315 adafcd4883f05b9f32c64126c5275837 633 SUPERFAMILY SSF56519 56 253 7.32E-53 T 28-03-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 AM393_RS18315 adafcd4883f05b9f32c64126c5275837 633 Gene3D G3DSA:3.90.1310.10 33 249 1.9E-54 T 28-03-2018 AM393_RS18315 adafcd4883f05b9f32c64126c5275837 633 Gene3D G3DSA:3.40.710.10 250 618 1.6E-84 T 28-03-2018 AM393_RS15575 f4bdcdd7ad44ba056cac57ad3dfb3472 196 Pfam PF01810 LysE type translocator 15 195 2.4E-10 T 28-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AM393_RS12775 f6db68fac5ccdcabf7073f907e5efd10 379 Gene3D G3DSA:3.30.70.20 200 365 4.1E-11 T 28-03-2018 AM393_RS12775 f6db68fac5ccdcabf7073f907e5efd10 379 Gene3D G3DSA:3.30.70.20 124 199 0.0016 T 28-03-2018 AM393_RS12775 f6db68fac5ccdcabf7073f907e5efd10 379 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 7 315 51.283 T 28-03-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 AM393_RS12775 f6db68fac5ccdcabf7073f907e5efd10 379 SUPERFAMILY SSF46548 139 256 8.89E-20 T 28-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AM393_RS12775 f6db68fac5ccdcabf7073f907e5efd10 379 Pfam PF08331 Domain of unknown function (DUF1730) 62 140 8.1E-24 T 28-03-2018 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700 AM393_RS12775 f6db68fac5ccdcabf7073f907e5efd10 379 Pfam PF13484 4Fe-4S double cluster binding domain 193 256 5.1E-19 T 28-03-2018 AM393_RS12775 f6db68fac5ccdcabf7073f907e5efd10 379 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 14 348 1.4E-152 T 28-03-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 AM393_RS12775 f6db68fac5ccdcabf7073f907e5efd10 379 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 193 204 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM393_RS17265 39abd97d02c9d3976b97665b9be4b3af 494 Gene3D G3DSA:3.30.70.270 106 364 4.4E-31 T 28-03-2018 AM393_RS17265 39abd97d02c9d3976b97665b9be4b3af 494 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 134 364 7.5E-51 T 28-03-2018 IPR000477 Reverse transcriptase domain AM393_RS17265 39abd97d02c9d3976b97665b9be4b3af 494 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 80 450 1.8E-111 T 28-03-2018 IPR030931 Group II intron reverse transcriptase/maturase AM393_RS17265 39abd97d02c9d3976b97665b9be4b3af 494 SUPERFAMILY SSF56672 54 407 3.49E-63 T 28-03-2018 AM393_RS05075 305ad968459cfba72f987c99c47969d1 236 Gene3D G3DSA:3.40.50.1360 67 234 1.8E-30 T 28-03-2018 AM393_RS05075 305ad968459cfba72f987c99c47969d1 236 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 23 37 4.6E-8 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM393_RS05075 305ad968459cfba72f987c99c47969d1 236 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 37 55 4.6E-8 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM393_RS05075 305ad968459cfba72f987c99c47969d1 236 SUPERFAMILY SSF46785 4 59 2.44E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS05075 305ad968459cfba72f987c99c47969d1 236 SUPERFAMILY SSF100950 76 233 3.03E-28 T 28-03-2018 AM393_RS05075 305ad968459cfba72f987c99c47969d1 236 SMART SM00420 5 57 1.1E-18 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM393_RS05075 305ad968459cfba72f987c99c47969d1 236 Gene3D G3DSA:1.10.10.10 1 62 1.6E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS05075 305ad968459cfba72f987c99c47969d1 236 ProSitePatterns PS00894 DeoR-type HTH domain signature. 5 39 - T 28-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 AM393_RS05075 305ad968459cfba72f987c99c47969d1 236 Pfam PF00455 DeoR C terminal sensor domain 76 232 9.3E-44 T 28-03-2018 IPR014036 DeoR C-terminal sensor domain AM393_RS05075 305ad968459cfba72f987c99c47969d1 236 Pfam PF08220 DeoR-like helix-turn-helix domain 5 60 2.4E-17 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM393_RS05075 305ad968459cfba72f987c99c47969d1 236 SMART SM01134 74 234 1.3E-53 T 28-03-2018 AM393_RS10205 a045dd962924f4d3b23f4612952a9ea1 562 SUPERFAMILY SSF52518 9 187 2.95E-60 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold AM393_RS10205 a045dd962924f4d3b23f4612952a9ea1 562 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 201 334 9.6E-46 T 28-03-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 AM393_RS10205 a045dd962924f4d3b23f4612952a9ea1 562 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 390 538 2.3E-47 T 28-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AM393_RS10205 a045dd962924f4d3b23f4612952a9ea1 562 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 14 180 1.1E-57 T 28-03-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 AM393_RS10205 a045dd962924f4d3b23f4612952a9ea1 562 SUPERFAMILY SSF52518 366 560 3.57E-64 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold AM393_RS10205 a045dd962924f4d3b23f4612952a9ea1 562 Gene3D G3DSA:3.40.50.1220 196 348 3.5E-52 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AM393_RS10205 a045dd962924f4d3b23f4612952a9ea1 562 SUPERFAMILY SSF52467 165 361 2.65E-58 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AM393_RS10205 a045dd962924f4d3b23f4612952a9ea1 562 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 427 446 - T 28-03-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 AM393_RS10205 a045dd962924f4d3b23f4612952a9ea1 562 Gene3D G3DSA:3.40.50.970 349 551 1.9E-51 T 28-03-2018 AM393_RS10205 a045dd962924f4d3b23f4612952a9ea1 562 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 14 561 1.4E-202 T 28-03-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 AM393_RS10205 a045dd962924f4d3b23f4612952a9ea1 562 Gene3D G3DSA:3.40.50.970 6 195 4.9E-63 T 28-03-2018 AM393_RS02810 0cf23f51c68a8e24fc25ca58087d53c2 260 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 28 254 2.9E-61 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM393_RS02810 0cf23f51c68a8e24fc25ca58087d53c2 260 Gene3D G3DSA:3.40.190.10 141 258 1.1E-15 T 28-03-2018 AM393_RS02810 0cf23f51c68a8e24fc25ca58087d53c2 260 SUPERFAMILY SSF53850 26 257 2.3E-64 T 28-03-2018 AM393_RS02810 0cf23f51c68a8e24fc25ca58087d53c2 260 Gene3D G3DSA:3.40.190.10 16 140 9.4E-35 T 28-03-2018 AM393_RS02810 0cf23f51c68a8e24fc25ca58087d53c2 260 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 50 63 - T 28-03-2018 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 AM393_RS02810 0cf23f51c68a8e24fc25ca58087d53c2 260 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 4 253 1.5E-100 T 28-03-2018 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter GO:0006810|GO:0030288 AM393_RS02810 0cf23f51c68a8e24fc25ca58087d53c2 260 SMART SM00062 27 256 3.0E-77 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM393_RS24585 b0dea2e1c2f8a909fbcacd373ddd1ff4 725 SUPERFAMILY SSF48113 435 725 4.72E-104 T 28-03-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 AM393_RS24585 b0dea2e1c2f8a909fbcacd373ddd1ff4 725 Gene3D G3DSA:1.10.520.10 63 219 1.7E-35 T 28-03-2018 AM393_RS24585 b0dea2e1c2f8a909fbcacd373ddd1ff4 725 Pfam PF00141 Peroxidase 403 698 8.7E-35 T 28-03-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AM393_RS24585 b0dea2e1c2f8a909fbcacd373ddd1ff4 725 Pfam PF00141 Peroxidase 82 396 1.8E-46 T 28-03-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AM393_RS24585 b0dea2e1c2f8a909fbcacd373ddd1ff4 725 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 479 505 2.4E-51 T 28-03-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 AM393_RS24585 b0dea2e1c2f8a909fbcacd373ddd1ff4 725 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 59 72 2.4E-51 T 28-03-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 AM393_RS24585 b0dea2e1c2f8a909fbcacd373ddd1ff4 725 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 267 290 2.4E-51 T 28-03-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 AM393_RS24585 b0dea2e1c2f8a909fbcacd373ddd1ff4 725 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 74 99 2.4E-51 T 28-03-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 AM393_RS24585 b0dea2e1c2f8a909fbcacd373ddd1ff4 725 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 33 55 2.4E-51 T 28-03-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 AM393_RS24585 b0dea2e1c2f8a909fbcacd373ddd1ff4 725 Gene3D G3DSA:1.10.520.10 442 592 1.2E-32 T 28-03-2018 AM393_RS24585 b0dea2e1c2f8a909fbcacd373ddd1ff4 725 PRINTS PR00458 Haem peroxidase superfamily signature 318 333 6.4E-18 T 28-03-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AM393_RS24585 b0dea2e1c2f8a909fbcacd373ddd1ff4 725 PRINTS PR00458 Haem peroxidase superfamily signature 175 187 6.4E-18 T 28-03-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AM393_RS24585 b0dea2e1c2f8a909fbcacd373ddd1ff4 725 PRINTS PR00458 Haem peroxidase superfamily signature 157 174 6.4E-18 T 28-03-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AM393_RS24585 b0dea2e1c2f8a909fbcacd373ddd1ff4 725 PRINTS PR00458 Haem peroxidase superfamily signature 259 274 6.4E-18 T 28-03-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AM393_RS24585 b0dea2e1c2f8a909fbcacd373ddd1ff4 725 PRINTS PR00458 Haem peroxidase superfamily signature 97 111 6.4E-18 T 28-03-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AM393_RS24585 b0dea2e1c2f8a909fbcacd373ddd1ff4 725 Hamap MF_01961 Catalase-peroxidase [katG]. 11 725 39.077 T 28-03-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 AM393_RS24585 b0dea2e1c2f8a909fbcacd373ddd1ff4 725 Gene3D G3DSA:1.10.420.10 593 701 5.9E-35 T 28-03-2018 AM393_RS24585 b0dea2e1c2f8a909fbcacd373ddd1ff4 725 Gene3D G3DSA:1.10.420.10 231 397 1.2E-38 T 28-03-2018 AM393_RS24585 b0dea2e1c2f8a909fbcacd373ddd1ff4 725 SUPERFAMILY SSF48113 29 429 1.92E-139 T 28-03-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 AM393_RS24585 b0dea2e1c2f8a909fbcacd373ddd1ff4 725 TIGRFAM TIGR00198 cat_per_HPI: catalase/peroxidase HPI 24 725 0.0 T 28-03-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 AM393_RS26330 51c4eccf839619372189630dddbb7a15 394 PIRSF PIRSF000138 2 380 3.1E-120 T 28-03-2018 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 AM393_RS26330 51c4eccf839619372189630dddbb7a15 394 Pfam PF01070 FMN-dependent dehydrogenase 13 375 1.3E-123 T 28-03-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 AM393_RS26330 51c4eccf839619372189630dddbb7a15 394 SUPERFAMILY SSF51395 7 193 2.38E-90 T 28-03-2018 AM393_RS26330 51c4eccf839619372189630dddbb7a15 394 SUPERFAMILY SSF51395 223 370 2.38E-90 T 28-03-2018 AM393_RS26330 51c4eccf839619372189630dddbb7a15 394 Gene3D G3DSA:3.20.20.70 2 379 1.0E-89 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM393_RS26330 51c4eccf839619372189630dddbb7a15 394 ProSitePatterns PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site. 273 279 - T 28-03-2018 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site GO:0016491|GO:0055114 AM393_RS08750 4ed4d79ed12ee1f3271a7b7f4e7f25a6 728 Gene3D G3DSA:2.60.40.1180 623 726 1.2E-32 T 28-03-2018 AM393_RS08750 4ed4d79ed12ee1f3271a7b7f4e7f25a6 728 SUPERFAMILY SSF81296 16 115 7.8E-19 T 28-03-2018 IPR014756 Immunoglobulin E-set AM393_RS08750 4ed4d79ed12ee1f3271a7b7f4e7f25a6 728 Pfam PF00128 Alpha amylase, catalytic domain 273 342 1.1E-7 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AM393_RS08750 4ed4d79ed12ee1f3271a7b7f4e7f25a6 728 SMART SM00642 247 596 6.8E-7 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AM393_RS08750 4ed4d79ed12ee1f3271a7b7f4e7f25a6 728 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 125 207 4.1E-25 T 28-03-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077 AM393_RS08750 4ed4d79ed12ee1f3271a7b7f4e7f25a6 728 PIRSF PIRSF000463 6 728 1.3E-281 T 28-03-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: R-HSA-3322077 AM393_RS08750 4ed4d79ed12ee1f3271a7b7f4e7f25a6 728 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 628 725 9.5E-22 T 28-03-2018 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622 AM393_RS08750 4ed4d79ed12ee1f3271a7b7f4e7f25a6 728 Gene3D G3DSA:3.20.20.80 234 612 1.1E-71 T 28-03-2018 AM393_RS08750 4ed4d79ed12ee1f3271a7b7f4e7f25a6 728 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 109 723 0.0 T 28-03-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: R-HSA-3322077 AM393_RS08750 4ed4d79ed12ee1f3271a7b7f4e7f25a6 728 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 101 726 43.37 T 28-03-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: R-HSA-3322077 AM393_RS08750 4ed4d79ed12ee1f3271a7b7f4e7f25a6 728 SUPERFAMILY SSF51445 231 621 1.83E-111 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily AM393_RS08750 4ed4d79ed12ee1f3271a7b7f4e7f25a6 728 Gene3D G3DSA:2.60.40.10 112 223 1.1E-33 T 28-03-2018 IPR013783 Immunoglobulin-like fold AM393_RS08750 4ed4d79ed12ee1f3271a7b7f4e7f25a6 728 SUPERFAMILY SSF51011 623 726 9.35E-34 T 28-03-2018 AM393_RS08750 4ed4d79ed12ee1f3271a7b7f4e7f25a6 728 SUPERFAMILY SSF81296 117 224 9.97E-35 T 28-03-2018 IPR014756 Immunoglobulin E-set AM393_RS08750 4ed4d79ed12ee1f3271a7b7f4e7f25a6 728 Gene3D G3DSA:2.60.40.10 1 104 9.3E-12 T 28-03-2018 IPR013783 Immunoglobulin-like fold AM393_RS23020 b1290a84bfc44f5b7ff9e11e227d5811 218 SUPERFAMILY SSF100950 5 212 6.28E-62 T 28-03-2018 AM393_RS23020 b1290a84bfc44f5b7ff9e11e227d5811 218 ProSitePatterns PS01274 Coenzyme A transferases signature 2. 45 53 - T 28-03-2018 IPR004164 Coenzyme A transferase active site GO:0008152|GO:0008410 Reactome: R-HSA-77108 AM393_RS23020 b1290a84bfc44f5b7ff9e11e227d5811 218 Pfam PF01144 Coenzyme A transferase 7 201 1.6E-38 T 28-03-2018 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 Reactome: R-HSA-77108 AM393_RS23020 b1290a84bfc44f5b7ff9e11e227d5811 218 SMART SM00882 7 204 5.8E-67 T 28-03-2018 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 Reactome: R-HSA-77108 AM393_RS23020 b1290a84bfc44f5b7ff9e11e227d5811 218 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 5 210 3.9E-91 T 28-03-2018 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 Reactome: R-HSA-77108 AM393_RS23020 b1290a84bfc44f5b7ff9e11e227d5811 218 Gene3D G3DSA:3.40.1080.10 4 214 1.2E-54 T 28-03-2018 AM393_RS12590 81402a42e8122af0e071bc397467038d 158 Pfam PF04186 FxsA cytoplasmic membrane protein 8 111 1.9E-33 T 28-03-2018 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 AM393_RS27555 83f0832cf73a1b2a7a60c4ee395a4845 116 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 29 40 4.8E-25 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM393_RS27555 83f0832cf73a1b2a7a60c4ee395a4845 116 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 9 24 4.8E-25 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM393_RS27555 83f0832cf73a1b2a7a60c4ee395a4845 116 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 42 57 4.8E-25 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM393_RS27555 83f0832cf73a1b2a7a60c4ee395a4845 116 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 57 72 4.8E-25 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM393_RS27555 83f0832cf73a1b2a7a60c4ee395a4845 116 Pfam PF01022 Bacterial regulatory protein, arsR family 14 59 1.6E-15 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM393_RS27555 83f0832cf73a1b2a7a60c4ee395a4845 116 SUPERFAMILY SSF46785 2 103 1.91E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS27555 83f0832cf73a1b2a7a60c4ee395a4845 116 SMART SM00418 7 85 2.9E-29 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM393_RS27555 83f0832cf73a1b2a7a60c4ee395a4845 116 Gene3D G3DSA:1.10.10.10 3 106 6.0E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS26050 d640355bc3ecb12058df51fe4fd092a2 716 SUPERFAMILY SSF50692 566 700 1.38E-43 T 28-03-2018 IPR009010 Aspartate decarboxylase-like domain AM393_RS26050 d640355bc3ecb12058df51fe4fd092a2 716 Gene3D G3DSA:2.40.40.20 536 688 1.6E-39 T 28-03-2018 AM393_RS26050 d640355bc3ecb12058df51fe4fd092a2 716 Gene3D G3DSA:2.20.25.90 1 55 5.9E-16 T 28-03-2018 AM393_RS26050 d640355bc3ecb12058df51fe4fd092a2 716 Pfam PF01568 Molydopterin dinucleotide binding domain 576 683 5.5E-30 T 28-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 AM393_RS26050 d640355bc3ecb12058df51fe4fd092a2 716 Gene3D G3DSA:1.20.5.460 691 714 4.2E-9 T 28-03-2018 AM393_RS26050 d640355bc3ecb12058df51fe4fd092a2 716 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 616 643 - T 28-03-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 AM393_RS26050 d640355bc3ecb12058df51fe4fd092a2 716 TIGRFAM TIGR01591 Fdh-alpha: formate dehydrogenase, alpha subunit 7 686 2.5E-271 T 28-03-2018 IPR006478 Formate dehydrogenase, alpha subunit GO:0008863|GO:0015942|GO:0055114 KEGG: 00630+1.2.1.2|KEGG: 00680+1.2.1.2|MetaCyc: PWY-1881|MetaCyc: PWY-5497|MetaCyc: PWY-6696 AM393_RS26050 d640355bc3ecb12058df51fe4fd092a2 716 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 435 452 - T 28-03-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 AM393_RS26050 d640355bc3ecb12058df51fe4fd092a2 716 Gene3D G3DSA:3.40.50.740 257 535 7.2E-81 T 28-03-2018 AM393_RS26050 d640355bc3ecb12058df51fe4fd092a2 716 Gene3D G3DSA:3.40.50.740 61 167 9.4E-26 T 28-03-2018 AM393_RS26050 d640355bc3ecb12058df51fe4fd092a2 716 Gene3D G3DSA:3.40.228.10 168 256 9.4E-25 T 28-03-2018 AM393_RS26050 d640355bc3ecb12058df51fe4fd092a2 716 PIRSF PIRSF000144 52 437 1.1E-52 T 28-03-2018 AM393_RS26050 d640355bc3ecb12058df51fe4fd092a2 716 PIRSF PIRSF000144 535 693 0.026 T 28-03-2018 AM393_RS26050 d640355bc3ecb12058df51fe4fd092a2 716 SUPERFAMILY SSF53706 1 564 2.22E-192 T 28-03-2018 AM393_RS26050 d640355bc3ecb12058df51fe4fd092a2 716 SMART SM00926 1 54 5.8E-15 T 28-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM393_RS26050 d640355bc3ecb12058df51fe4fd092a2 716 Pfam PF00384 Molybdopterin oxidoreductase 61 488 1.1E-89 T 28-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM393_RS26050 d640355bc3ecb12058df51fe4fd092a2 716 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 1 53 1.4E-12 T 28-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM393_RS03600 d42fac78b58d6f1c3bd2a27f4f4f5176 616 Gene3D G3DSA:3.30.420.40 209 358 6.0E-40 T 28-03-2018 AM393_RS03600 d42fac78b58d6f1c3bd2a27f4f4f5176 616 SUPERFAMILY SSF53067 20 196 1.74E-50 T 28-03-2018 AM393_RS03600 d42fac78b58d6f1c3bd2a27f4f4f5176 616 SUPERFAMILY SSF100920 384 535 3.92E-50 T 28-03-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 AM393_RS03600 d42fac78b58d6f1c3bd2a27f4f4f5176 616 Gene3D G3DSA:3.30.420.40 20 208 3.8E-57 T 28-03-2018 AM393_RS03600 d42fac78b58d6f1c3bd2a27f4f4f5176 616 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 205 218 - T 28-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AM393_RS03600 d42fac78b58d6f1c3bd2a27f4f4f5176 616 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 24 31 - T 28-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AM393_RS03600 d42fac78b58d6f1c3bd2a27f4f4f5176 616 Pfam PF00012 Hsp70 protein 22 600 3.1E-198 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM393_RS03600 d42fac78b58d6f1c3bd2a27f4f4f5176 616 SUPERFAMILY SSF100934 504 615 8.63E-36 T 28-03-2018 IPR029048 Heat shock protein 70kD, C-terminal domain AM393_RS03600 d42fac78b58d6f1c3bd2a27f4f4f5176 616 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 332 346 - T 28-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AM393_RS03600 d42fac78b58d6f1c3bd2a27f4f4f5176 616 Gene3D G3DSA:2.60.34.10 387 528 6.8E-49 T 28-03-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 AM393_RS03600 d42fac78b58d6f1c3bd2a27f4f4f5176 616 SUPERFAMILY SSF53067 200 377 7.2E-52 T 28-03-2018 AM393_RS03600 d42fac78b58d6f1c3bd2a27f4f4f5176 616 Gene3D G3DSA:1.20.1270.10 529 615 3.3E-12 T 28-03-2018 IPR029048 Heat shock protein 70kD, C-terminal domain AM393_RS03600 d42fac78b58d6f1c3bd2a27f4f4f5176 616 Hamap MF_00679 Chaperone protein HscA [hscA]. 1 616 45.715 T 28-03-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 AM393_RS03600 d42fac78b58d6f1c3bd2a27f4f4f5176 616 PRINTS PR00301 70kDa heat shock protein signature 329 345 3.7E-54 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM393_RS03600 d42fac78b58d6f1c3bd2a27f4f4f5176 616 PRINTS PR00301 70kDa heat shock protein signature 20 33 3.7E-54 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM393_RS03600 d42fac78b58d6f1c3bd2a27f4f4f5176 616 PRINTS PR00301 70kDa heat shock protein signature 48 60 3.7E-54 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM393_RS03600 d42fac78b58d6f1c3bd2a27f4f4f5176 616 PRINTS PR00301 70kDa heat shock protein signature 385 404 3.7E-54 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM393_RS03600 d42fac78b58d6f1c3bd2a27f4f4f5176 616 PRINTS PR00301 70kDa heat shock protein signature 360 380 3.7E-54 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM393_RS03600 d42fac78b58d6f1c3bd2a27f4f4f5176 616 PRINTS PR00301 70kDa heat shock protein signature 466 482 3.7E-54 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM393_RS03600 d42fac78b58d6f1c3bd2a27f4f4f5176 616 PRINTS PR00301 70kDa heat shock protein signature 152 172 3.7E-54 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM393_RS03600 d42fac78b58d6f1c3bd2a27f4f4f5176 616 PRINTS PR00301 70kDa heat shock protein signature 211 221 3.7E-54 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM393_RS03600 d42fac78b58d6f1c3bd2a27f4f4f5176 616 TIGRFAM TIGR01991 HscA: Fe-S protein assembly chaperone HscA 21 615 6.1E-272 T 28-03-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 AM393_RS20375 f172458b239e0c2c38baa4bfa0476a0e 473 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 271 286 - T 28-03-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 AM393_RS20375 f172458b239e0c2c38baa4bfa0476a0e 473 SUPERFAMILY SSF55931 134 470 1.5E-93 T 28-03-2018 AM393_RS20375 f172458b239e0c2c38baa4bfa0476a0e 473 Pfam PF00120 Glutamine synthetase, catalytic domain 134 468 3.6E-100 T 28-03-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AM393_RS20375 f172458b239e0c2c38baa4bfa0476a0e 473 Gene3D G3DSA:3.30.590.10 133 473 1.6E-87 T 28-03-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 AM393_RS20375 f172458b239e0c2c38baa4bfa0476a0e 473 SMART SM01230 133 390 5.0E-95 T 28-03-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AM393_RS20375 f172458b239e0c2c38baa4bfa0476a0e 473 SUPERFAMILY SSF54368 25 132 2.35E-9 T 28-03-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AM393_RS20375 f172458b239e0c2c38baa4bfa0476a0e 473 Gene3D G3DSA:3.10.20.70 20 132 3.0E-15 T 28-03-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AM393_RS21355 f130b14550bf1f5e0dc8393faf47e6dc 248 PIRSF PIRSF000897 1 248 5.3E-111 T 28-03-2018 IPR011158 Nonspecific acid phosphatase, class A GO:0003993|GO:0030288 KEGG: 00740+3.1.3.2|MetaCyc: PWY-6348 AM393_RS21355 f130b14550bf1f5e0dc8393faf47e6dc 248 Pfam PF01569 PAP2 superfamily 129 229 6.4E-15 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AM393_RS21355 f130b14550bf1f5e0dc8393faf47e6dc 248 SMART SM00014 115 227 3.2E-32 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AM393_RS21355 f130b14550bf1f5e0dc8393faf47e6dc 248 Gene3D G3DSA:1.20.144.10 19 248 8.8E-45 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AM393_RS21355 f130b14550bf1f5e0dc8393faf47e6dc 248 PRINTS PR00483 Bacterial acid phosphatase class A signature 132 150 2.1E-60 T 28-03-2018 IPR001011 Acid phosphatase, class A, bacterial GO:0003993|GO:0030288 KEGG: 00740+3.1.3.2|MetaCyc: PWY-6348 AM393_RS21355 f130b14550bf1f5e0dc8393faf47e6dc 248 PRINTS PR00483 Bacterial acid phosphatase class A signature 67 86 2.1E-60 T 28-03-2018 IPR001011 Acid phosphatase, class A, bacterial GO:0003993|GO:0030288 KEGG: 00740+3.1.3.2|MetaCyc: PWY-6348 AM393_RS21355 f130b14550bf1f5e0dc8393faf47e6dc 248 PRINTS PR00483 Bacterial acid phosphatase class A signature 224 242 2.1E-60 T 28-03-2018 IPR001011 Acid phosphatase, class A, bacterial GO:0003993|GO:0030288 KEGG: 00740+3.1.3.2|MetaCyc: PWY-6348 AM393_RS21355 f130b14550bf1f5e0dc8393faf47e6dc 248 PRINTS PR00483 Bacterial acid phosphatase class A signature 190 214 2.1E-60 T 28-03-2018 IPR001011 Acid phosphatase, class A, bacterial GO:0003993|GO:0030288 KEGG: 00740+3.1.3.2|MetaCyc: PWY-6348 AM393_RS21355 f130b14550bf1f5e0dc8393faf47e6dc 248 PRINTS PR00483 Bacterial acid phosphatase class A signature 158 184 2.1E-60 T 28-03-2018 IPR001011 Acid phosphatase, class A, bacterial GO:0003993|GO:0030288 KEGG: 00740+3.1.3.2|MetaCyc: PWY-6348 AM393_RS21355 f130b14550bf1f5e0dc8393faf47e6dc 248 ProSitePatterns PS01157 Class A bacterial acid phosphatases signature. 162 169 - T 28-03-2018 IPR018296 Acid phosphatase, class A, bacterial, conserved site GO:0003993|GO:0030288 KEGG: 00740+3.1.3.2|MetaCyc: PWY-6348 AM393_RS21355 f130b14550bf1f5e0dc8393faf47e6dc 248 SUPERFAMILY SSF48317 6 245 2.75E-49 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AM393_RS11945 15672f9b9a99283505ddd0fa7ac07d74 291 Pfam PF00849 RNA pseudouridylate synthase 69 195 4.0E-15 T 28-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM393_RS11945 15672f9b9a99283505ddd0fa7ac07d74 291 Pfam PF01479 S4 domain 8 52 5.1E-14 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AM393_RS11945 15672f9b9a99283505ddd0fa7ac07d74 291 SUPERFAMILY SSF55120 69 229 3.36E-38 T 28-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM393_RS11945 15672f9b9a99283505ddd0fa7ac07d74 291 Gene3D G3DSA:3.10.290.10 4 65 5.1E-18 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AM393_RS11945 15672f9b9a99283505ddd0fa7ac07d74 291 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 73 226 8.9E-54 T 28-03-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 AM393_RS11945 15672f9b9a99283505ddd0fa7ac07d74 291 Gene3D G3DSA:3.30.70.580 66 144 1.0E-16 T 28-03-2018 AM393_RS11945 15672f9b9a99283505ddd0fa7ac07d74 291 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 104 118 - T 28-03-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 AM393_RS11945 15672f9b9a99283505ddd0fa7ac07d74 291 SUPERFAMILY SSF55174 8 62 1.21E-13 T 28-03-2018 AM393_RS11945 15672f9b9a99283505ddd0fa7ac07d74 291 Gene3D G3DSA:3.30.70.1560 145 212 1.8E-23 T 28-03-2018 AM393_RS11945 15672f9b9a99283505ddd0fa7ac07d74 291 SMART SM00363 7 63 5.2E-15 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AM393_RS14235 f1939680f3c964479a721623a258b24e 338 Hamap MF_01602 Lipoate-protein ligase A [lplA]. 1 338 59.107 T 28-03-2018 IPR023741 Lipoate-protein ligase A GO:0016979|GO:0018055 KEGG: 00785+6.3.1.20 AM393_RS14235 f1939680f3c964479a721623a258b24e 338 TIGRFAM TIGR00545 lipoyltrans: lipoyltransferase and lipoate-protein ligase 2 329 6.7E-135 T 28-03-2018 IPR004562 Lipoyltransferase/lipoate-protein ligase GO:0009249 KEGG: 00785+6.3.1.20|Reactome: R-HSA-389661 AM393_RS14235 f1939680f3c964479a721623a258b24e 338 Gene3D G3DSA:3.30.930.10 2 249 1.4E-71 T 28-03-2018 AM393_RS14235 f1939680f3c964479a721623a258b24e 338 Pfam PF10437 Bacterial lipoate protein ligase C-terminus 250 333 1.7E-18 T 28-03-2018 IPR019491 Lipoate protein ligase, C-terminal KEGG: 00785+6.3.1.20 AM393_RS14235 f1939680f3c964479a721623a258b24e 338 Gene3D G3DSA:3.30.390.50 250 337 1.9E-23 T 28-03-2018 AM393_RS14235 f1939680f3c964479a721623a258b24e 338 Pfam PF03099 Biotin/lipoate A/B protein ligase family 52 158 3.5E-8 T 28-03-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 AM393_RS14235 f1939680f3c964479a721623a258b24e 338 SUPERFAMILY SSF82649 248 335 2.83E-24 T 28-03-2018 AM393_RS14235 f1939680f3c964479a721623a258b24e 338 SUPERFAMILY SSF55681 3 247 5.72E-78 T 28-03-2018 AM393_RS08290 1faa9c5830eee7c841f41339d8e812a0 136 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 58 69 - T 28-03-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM393_RS08290 1faa9c5830eee7c841f41339d8e812a0 136 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 81 92 - T 28-03-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM393_RS08290 1faa9c5830eee7c841f41339d8e812a0 136 Pfam PF00252 Ribosomal protein L16p/L10e 4 131 1.6E-46 T 28-03-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 AM393_RS08290 1faa9c5830eee7c841f41339d8e812a0 136 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 133 38.025 T 28-03-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS08290 1faa9c5830eee7c841f41339d8e812a0 136 Gene3D G3DSA:3.90.1170.10 1 136 5.7E-50 T 28-03-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 AM393_RS08290 1faa9c5830eee7c841f41339d8e812a0 136 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 126 1.1E-58 T 28-03-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS08290 1faa9c5830eee7c841f41339d8e812a0 136 PRINTS PR00060 Ribosomal protein L16 signature 87 116 2.9E-40 T 28-03-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS08290 1faa9c5830eee7c841f41339d8e812a0 136 PRINTS PR00060 Ribosomal protein L16 signature 57 86 2.9E-40 T 28-03-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS08290 1faa9c5830eee7c841f41339d8e812a0 136 PRINTS PR00060 Ribosomal protein L16 signature 41 52 2.9E-40 T 28-03-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS08290 1faa9c5830eee7c841f41339d8e812a0 136 PRINTS PR00060 Ribosomal protein L16 signature 23 35 2.9E-40 T 28-03-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS08290 1faa9c5830eee7c841f41339d8e812a0 136 SUPERFAMILY SSF54686 3 133 1.83E-54 T 28-03-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 AM393_RS18635 174d24e598c6b46efd8937440c2c6da2 214 SUPERFAMILY SSF53182 3 214 1.57E-73 T 28-03-2018 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like AM393_RS18635 174d24e598c6b46efd8937440c2c6da2 214 Hamap MF_00417 Pyrrolidone-carboxylate peptidase [pcp]. 2 200 39.755 T 28-03-2018 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 AM393_RS18635 174d24e598c6b46efd8937440c2c6da2 214 ProSitePatterns PS01333 Pyrrolidone-carboxylate peptidase glutamic acid active site. 69 85 - T 28-03-2018 IPR033693 Pyroglutamyl peptidase I, Glu active site AM393_RS18635 174d24e598c6b46efd8937440c2c6da2 214 Gene3D G3DSA:3.40.630.20 2 214 2.8E-67 T 28-03-2018 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like AM393_RS18635 174d24e598c6b46efd8937440c2c6da2 214 TIGRFAM TIGR00504 pyro_pdase: pyroglutamyl-peptidase I 4 211 3.3E-87 T 28-03-2018 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 AM393_RS18635 174d24e598c6b46efd8937440c2c6da2 214 PIRSF PIRSF015592 1 212 3.9E-85 T 28-03-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 AM393_RS18635 174d24e598c6b46efd8937440c2c6da2 214 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 4 27 1.1E-48 T 28-03-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 AM393_RS18635 174d24e598c6b46efd8937440c2c6da2 214 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 161 173 1.1E-48 T 28-03-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 AM393_RS18635 174d24e598c6b46efd8937440c2c6da2 214 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 62 74 1.1E-48 T 28-03-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 AM393_RS18635 174d24e598c6b46efd8937440c2c6da2 214 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 80 100 1.1E-48 T 28-03-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 AM393_RS18635 174d24e598c6b46efd8937440c2c6da2 214 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 132 148 1.1E-48 T 28-03-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 AM393_RS18635 174d24e598c6b46efd8937440c2c6da2 214 ProSitePatterns PS01334 Pyrrolidone-carboxylate peptidase cysteine active site. 130 144 - T 28-03-2018 IPR033694 Pyroglutamyl peptidase I, Cys active site AM393_RS18635 174d24e598c6b46efd8937440c2c6da2 214 Pfam PF01470 Pyroglutamyl peptidase 4 202 6.8E-81 T 28-03-2018 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like AM393_RS15105 03b879cc754191032e835c6108c50f3e 159 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 134 2.7E-36 T 28-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AM393_RS15105 03b879cc754191032e835c6108c50f3e 159 Gene3D G3DSA:3.30.70.560 1 158 2.0E-55 T 28-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AM393_RS15105 03b879cc754191032e835c6108c50f3e 159 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 134 2.3E-46 T 28-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AM393_RS15105 03b879cc754191032e835c6108c50f3e 159 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 89 100 - T 28-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AM393_RS15105 03b879cc754191032e835c6108c50f3e 159 SUPERFAMILY SSF55083 1 150 3.4E-54 T 28-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AM393_RS05925 b0bdd3540e9a99ccaaaa01bb2895a69b 247 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM393_RS05925 b0bdd3540e9a99ccaaaa01bb2895a69b 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 1.8E-37 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS05925 b0bdd3540e9a99ccaaaa01bb2895a69b 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 1.8E-37 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS05925 b0bdd3540e9a99ccaaaa01bb2895a69b 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 1.8E-37 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS05925 b0bdd3540e9a99ccaaaa01bb2895a69b 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 1.8E-37 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS05925 b0bdd3540e9a99ccaaaa01bb2895a69b 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 231 1.8E-37 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS05925 b0bdd3540e9a99ccaaaa01bb2895a69b 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 1.8E-37 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS05925 b0bdd3540e9a99ccaaaa01bb2895a69b 247 Gene3D G3DSA:3.40.50.720 36 247 2.0E-59 T 28-03-2018 AM393_RS05925 b0bdd3540e9a99ccaaaa01bb2895a69b 247 Gene3D G3DSA:3.40.50.720 1 35 7.8E-6 T 28-03-2018 AM393_RS05925 b0bdd3540e9a99ccaaaa01bb2895a69b 247 SUPERFAMILY SSF51735 3 246 6.11E-71 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS05925 b0bdd3540e9a99ccaaaa01bb2895a69b 247 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 8 246 1.5E-55 T 28-03-2018 AM393_RS05925 b0bdd3540e9a99ccaaaa01bb2895a69b 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 1.7E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS05925 b0bdd3540e9a99ccaaaa01bb2895a69b 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 1.7E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS05925 b0bdd3540e9a99ccaaaa01bb2895a69b 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 1.7E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS22530 841691496e186cae6fc0cbce2ebb6cf7 247 Pfam PF00455 DeoR C terminal sensor domain 75 229 1.1E-40 T 28-03-2018 IPR014036 DeoR C-terminal sensor domain AM393_RS22530 841691496e186cae6fc0cbce2ebb6cf7 247 SMART SM01134 71 230 4.5E-56 T 28-03-2018 AM393_RS22530 841691496e186cae6fc0cbce2ebb6cf7 247 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 3.5E-10 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM393_RS22530 841691496e186cae6fc0cbce2ebb6cf7 247 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 3.5E-10 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM393_RS22530 841691496e186cae6fc0cbce2ebb6cf7 247 Pfam PF08220 DeoR-like helix-turn-helix domain 6 59 1.1E-17 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM393_RS22530 841691496e186cae6fc0cbce2ebb6cf7 247 SUPERFAMILY SSF100950 74 231 3.35E-23 T 28-03-2018 AM393_RS22530 841691496e186cae6fc0cbce2ebb6cf7 247 Gene3D G3DSA:1.10.10.10 1 61 1.4E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS22530 841691496e186cae6fc0cbce2ebb6cf7 247 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 28-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 AM393_RS22530 841691496e186cae6fc0cbce2ebb6cf7 247 SUPERFAMILY SSF46785 6 62 2.63E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS22530 841691496e186cae6fc0cbce2ebb6cf7 247 Gene3D G3DSA:3.40.50.1360 63 217 8.5E-32 T 28-03-2018 AM393_RS22530 841691496e186cae6fc0cbce2ebb6cf7 247 SMART SM00420 6 58 1.4E-17 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM393_RS04280 14c25bb60f18b752329b808694409033 713 PRINTS PR01183 Ribonucleotide reductase large chain signature 464 486 4.2E-32 T 28-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM393_RS04280 14c25bb60f18b752329b808694409033 713 PRINTS PR01183 Ribonucleotide reductase large chain signature 576 603 4.2E-32 T 28-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM393_RS04280 14c25bb60f18b752329b808694409033 713 PRINTS PR01183 Ribonucleotide reductase large chain signature 381 392 4.2E-32 T 28-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM393_RS04280 14c25bb60f18b752329b808694409033 713 PRINTS PR01183 Ribonucleotide reductase large chain signature 425 448 4.2E-32 T 28-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM393_RS04280 14c25bb60f18b752329b808694409033 713 PRINTS PR01183 Ribonucleotide reductase large chain signature 492 515 4.2E-32 T 28-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM393_RS04280 14c25bb60f18b752329b808694409033 713 PRINTS PR01183 Ribonucleotide reductase large chain signature 250 269 4.2E-32 T 28-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM393_RS04280 14c25bb60f18b752329b808694409033 713 Pfam PF02867 Ribonucleotide reductase, barrel domain 176 692 1.5E-139 T 28-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM393_RS04280 14c25bb60f18b752329b808694409033 713 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 565 587 - T 28-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM393_RS04280 14c25bb60f18b752329b808694409033 713 TIGRFAM TIGR04170 RNR_1b_NrdE: ribonucleoside-diphosphate reductase, class 1b, alpha subunit 14 713 0.0 T 28-03-2018 IPR026459 Ribonucleotide reductase, class 1b, subunit NrdE KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AM393_RS04280 14c25bb60f18b752329b808694409033 713 SUPERFAMILY SSF51998 174 697 3.66E-185 T 28-03-2018 AM393_RS04280 14c25bb60f18b752329b808694409033 713 Gene3D G3DSA:3.20.70.20 85 699 2.5E-157 T 28-03-2018 AM393_RS04280 14c25bb60f18b752329b808694409033 713 Pfam PF08343 Ribonucleotide reductase N-terminal 15 96 7.3E-25 T 28-03-2018 IPR013554 Ribonucleotide reductase N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AM393_RS04280 14c25bb60f18b752329b808694409033 713 SUPERFAMILY SSF48168 14 173 3.79E-53 T 28-03-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM393_RS04280 14c25bb60f18b752329b808694409033 713 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 98 170 8.6E-11 T 28-03-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM393_RS04280 14c25bb60f18b752329b808694409033 713 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 102 695 1.2E-155 T 28-03-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM393_RS20235 534afa68fc2c54dd46177fbee53f1278 711 Pfam PF13515 Fusaric acid resistance protein-like 406 525 6.9E-25 T 28-03-2018 AM393_RS20235 534afa68fc2c54dd46177fbee53f1278 711 Gene3D G3DSA:1.20.1250.20 58 533 7.7E-5 T 28-03-2018 AM393_RS20235 534afa68fc2c54dd46177fbee53f1278 711 TIGRFAM TIGR01667 YCCS_YHJK: integral membrane protein, YccS/YhfK family 8 705 0.0 T 28-03-2018 IPR010020 Integral membrane protein, YccS/YhfK AM393_RS20235 534afa68fc2c54dd46177fbee53f1278 711 Pfam PF12805 FUSC-like inner membrane protein yccS 66 345 5.3E-108 T 28-03-2018 IPR032692 Integral membrane protein YccS, N-terminal AM393_RS20235 534afa68fc2c54dd46177fbee53f1278 711 TIGRFAM TIGR01666 YCCS: TIGR01666 family membrane protein 8 705 0.0 T 28-03-2018 IPR010019 Integral membrane protein, YccS AM393_RS17795 75cecd93574e4075c2fc598f16284794 444 Gene3D G3DSA:3.40.640.10 101 348 1.1E-43 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM393_RS17795 75cecd93574e4075c2fc598f16284794 444 Gene3D G3DSA:3.90.1150.10 349 442 2.6E-8 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM393_RS17795 75cecd93574e4075c2fc598f16284794 444 SMART SM00345 8 67 1.6E-11 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM393_RS17795 75cecd93574e4075c2fc598f16284794 444 SUPERFAMILY SSF46785 4 76 2.32E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS17795 75cecd93574e4075c2fc598f16284794 444 Pfam PF00155 Aminotransferase class I and II 86 419 1.3E-32 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AM393_RS17795 75cecd93574e4075c2fc598f16284794 444 Gene3D G3DSA:1.10.10.10 1 73 2.8E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS17795 75cecd93574e4075c2fc598f16284794 444 Pfam PF00392 Bacterial regulatory proteins, gntR family 5 67 1.7E-10 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM393_RS17795 75cecd93574e4075c2fc598f16284794 444 SUPERFAMILY SSF53383 84 438 1.01E-75 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM393_RS05630 7e4ff34e29fb9ed3cc5536ed6c26bfef 233 Gene3D G3DSA:2.60.40.10 147 229 8.6E-21 T 28-03-2018 IPR013783 Immunoglobulin-like fold AM393_RS05630 7e4ff34e29fb9ed3cc5536ed6c26bfef 233 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 21 145 1.3E-41 T 28-03-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 AM393_RS05630 7e4ff34e29fb9ed3cc5536ed6c26bfef 233 PRINTS PR00969 Pili chaperone signature 99 116 3.0E-34 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM393_RS05630 7e4ff34e29fb9ed3cc5536ed6c26bfef 233 PRINTS PR00969 Pili chaperone signature 70 91 3.0E-34 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM393_RS05630 7e4ff34e29fb9ed3cc5536ed6c26bfef 233 PRINTS PR00969 Pili chaperone signature 127 142 3.0E-34 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM393_RS05630 7e4ff34e29fb9ed3cc5536ed6c26bfef 233 PRINTS PR00969 Pili chaperone signature 161 176 3.0E-34 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM393_RS05630 7e4ff34e29fb9ed3cc5536ed6c26bfef 233 PRINTS PR00969 Pili chaperone signature 21 30 3.0E-34 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM393_RS05630 7e4ff34e29fb9ed3cc5536ed6c26bfef 233 SUPERFAMILY SSF49584 139 228 4.71E-19 T 28-03-2018 IPR016148 Pili assembly chaperone, C-terminal AM393_RS05630 7e4ff34e29fb9ed3cc5536ed6c26bfef 233 SUPERFAMILY SSF49354 15 145 1.44E-38 T 28-03-2018 IPR008962 PapD-like AM393_RS05630 7e4ff34e29fb9ed3cc5536ed6c26bfef 233 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 98 115 - T 28-03-2018 IPR018046 Pili assembly chaperone, conserved site AM393_RS05630 7e4ff34e29fb9ed3cc5536ed6c26bfef 233 Gene3D G3DSA:2.60.40.10 20 146 4.2E-34 T 28-03-2018 IPR013783 Immunoglobulin-like fold AM393_RS05630 7e4ff34e29fb9ed3cc5536ed6c26bfef 233 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 166 226 1.5E-15 T 28-03-2018 IPR016148 Pili assembly chaperone, C-terminal AM393_RS20370 602777c963250bf6eb064bc36c3c2556 254 Pfam PF07722 Peptidase C26 8 224 7.6E-70 T 28-03-2018 IPR011697 Peptidase C26 GO:0016787 Reactome: R-HSA-6798695 AM393_RS20370 602777c963250bf6eb064bc36c3c2556 254 Gene3D G3DSA:3.40.50.880 4 254 2.7E-45 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AM393_RS20370 602777c963250bf6eb064bc36c3c2556 254 SUPERFAMILY SSF52317 7 247 1.38E-40 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AM393_RS03790 173b78f78f9e053cc58ec05d8d00bb25 599 Gene3D G3DSA:2.40.30.10 188 287 3.3E-26 T 28-03-2018 AM393_RS03790 173b78f78f9e053cc58ec05d8d00bb25 599 PRINTS PR00315 GTP-binding elongation factor signature 90 101 4.0E-14 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM393_RS03790 173b78f78f9e053cc58ec05d8d00bb25 599 PRINTS PR00315 GTP-binding elongation factor signature 126 135 4.0E-14 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM393_RS03790 173b78f78f9e053cc58ec05d8d00bb25 599 PRINTS PR00315 GTP-binding elongation factor signature 6 19 4.0E-14 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM393_RS03790 173b78f78f9e053cc58ec05d8d00bb25 599 PRINTS PR00315 GTP-binding elongation factor signature 74 84 4.0E-14 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM393_RS03790 173b78f78f9e053cc58ec05d8d00bb25 599 PRINTS PR00315 GTP-binding elongation factor signature 49 57 4.0E-14 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM393_RS03790 173b78f78f9e053cc58ec05d8d00bb25 599 Gene3D G3DSA:3.40.50.300 1 185 1.5E-36 T 28-03-2018 AM393_RS03790 173b78f78f9e053cc58ec05d8d00bb25 599 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 172 2.1E-16 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AM393_RS03790 173b78f78f9e053cc58ec05d8d00bb25 599 SUPERFAMILY SSF52540 2 235 6.47E-58 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS03790 173b78f78f9e053cc58ec05d8d00bb25 599 Pfam PF00009 Elongation factor Tu GTP binding domain 2 181 2.3E-52 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM393_RS03790 173b78f78f9e053cc58ec05d8d00bb25 599 Pfam PF03144 Elongation factor Tu domain 2 205 275 2.0E-11 T 28-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AM393_RS03790 173b78f78f9e053cc58ec05d8d00bb25 599 SUPERFAMILY SSF54980 292 370 1.94E-18 T 28-03-2018 IPR035647 EF-G domain III/V-like AM393_RS03790 173b78f78f9e053cc58ec05d8d00bb25 599 TIGRFAM TIGR01393 lepA: elongation factor 4 2 594 3.5E-302 T 28-03-2018 IPR006297 Elongation factor 4 GO:0005525 AM393_RS03790 173b78f78f9e053cc58ec05d8d00bb25 599 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 42 57 - T 28-03-2018 IPR031157 Tr-type G domain, conserved site AM393_RS03790 173b78f78f9e053cc58ec05d8d00bb25 599 Pfam PF06421 GTP-binding protein LepA C-terminus 487 592 1.7E-49 T 28-03-2018 IPR013842 GTP-binding protein LepA, C-terminal AM393_RS03790 173b78f78f9e053cc58ec05d8d00bb25 599 Hamap MF_00071 Elongation factor 4 [lepA]. 1 597 307.975 T 28-03-2018 IPR006297 Elongation factor 4 GO:0005525 AM393_RS03790 173b78f78f9e053cc58ec05d8d00bb25 599 Gene3D G3DSA:3.30.70.870 288 367 1.4E-27 T 28-03-2018 AM393_RS03790 173b78f78f9e053cc58ec05d8d00bb25 599 SUPERFAMILY SSF54980 399 493 5.28E-24 T 28-03-2018 IPR035647 EF-G domain III/V-like AM393_RS03790 173b78f78f9e053cc58ec05d8d00bb25 599 Gene3D G3DSA:3.30.70.240 390 549 1.6E-25 T 28-03-2018 AM393_RS03790 173b78f78f9e053cc58ec05d8d00bb25 599 Pfam PF00679 Elongation factor G C-terminus 399 482 4.9E-19 T 28-03-2018 IPR000640 Elongation factor EFG, domain V-like AM393_RS10090 c295e3130a1d4751a604be9f0147745d 456 ProSitePatterns PS00216 Sugar transport proteins signature 1. 79 95 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM393_RS10090 c295e3130a1d4751a604be9f0147745d 456 ProSitePatterns PS00217 Sugar transport proteins signature 2. 121 146 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM393_RS10090 c295e3130a1d4751a604be9f0147745d 456 Gene3D G3DSA:1.20.1250.20 15 208 2.1E-39 T 28-03-2018 AM393_RS10090 c295e3130a1d4751a604be9f0147745d 456 Pfam PF07690 Major Facilitator Superfamily 30 335 1.0E-40 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS10090 c295e3130a1d4751a604be9f0147745d 456 Gene3D G3DSA:1.20.1250.20 234 451 2.3E-24 T 28-03-2018 AM393_RS10090 c295e3130a1d4751a604be9f0147745d 456 SUPERFAMILY SSF103473 8 439 5.75E-83 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS07255 a9d366d7bc0efbf81145d6780a42896c 298 SUPERFAMILY SSF53850 92 288 1.25E-22 T 28-03-2018 AM393_RS07255 a9d366d7bc0efbf81145d6780a42896c 298 Pfam PF03466 LysR substrate binding domain 98 280 1.7E-17 T 28-03-2018 IPR005119 LysR, substrate-binding AM393_RS07255 a9d366d7bc0efbf81145d6780a42896c 298 Gene3D G3DSA:1.10.10.10 2 89 1.5E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS07255 a9d366d7bc0efbf81145d6780a42896c 298 Gene3D G3DSA:3.40.190.10 94 183 1.6E-6 T 28-03-2018 AM393_RS07255 a9d366d7bc0efbf81145d6780a42896c 298 SUPERFAMILY SSF46785 8 92 1.36E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS07255 a9d366d7bc0efbf81145d6780a42896c 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 68 5.0E-16 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS07255 a9d366d7bc0efbf81145d6780a42896c 298 Gene3D G3DSA:3.40.190.10 184 268 6.2E-11 T 28-03-2018 AM393_RS09170 21078bea50e459748f17326c3ebec377 1158 Gene3D G3DSA:1.25.40.10 323 354 9.5E-4 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM393_RS09170 21078bea50e459748f17326c3ebec377 1158 Gene3D G3DSA:1.25.40.10 20 105 5.4E-6 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM393_RS09170 21078bea50e459748f17326c3ebec377 1158 Gene3D G3DSA:1.25.40.10 480 548 4.0E-6 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM393_RS09170 21078bea50e459748f17326c3ebec377 1158 Pfam PF13432 Tetratricopeptide repeat 276 338 1.2E-8 T 28-03-2018 AM393_RS09170 21078bea50e459748f17326c3ebec377 1158 Pfam PF13432 Tetratricopeptide repeat 68 104 0.009 T 28-03-2018 AM393_RS09170 21078bea50e459748f17326c3ebec377 1158 Pfam PF13432 Tetratricopeptide repeat 357 416 0.0082 T 28-03-2018 AM393_RS09170 21078bea50e459748f17326c3ebec377 1158 Gene3D G3DSA:1.25.40.10 274 322 1.4E-11 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM393_RS09170 21078bea50e459748f17326c3ebec377 1158 Gene3D G3DSA:1.25.40.10 407 479 2.4E-6 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM393_RS09170 21078bea50e459748f17326c3ebec377 1158 Pfam PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) 802 1137 2.7E-121 T 28-03-2018 IPR008410 Cellulose synthase operon C, C-terminal GO:0019867|GO:0030244 AM393_RS09170 21078bea50e459748f17326c3ebec377 1158 Gene3D G3DSA:1.25.40.10 355 406 5.8E-4 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM393_RS09170 21078bea50e459748f17326c3ebec377 1158 Pfam PF14559 Tetratricopeptide repeat 615 663 5.0E-7 T 28-03-2018 AM393_RS09170 21078bea50e459748f17326c3ebec377 1158 SUPERFAMILY SSF48452 58 207 2.75E-7 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM393_RS09170 21078bea50e459748f17326c3ebec377 1158 Gene3D G3DSA:1.25.40.10 106 214 6.6E-4 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM393_RS09170 21078bea50e459748f17326c3ebec377 1158 SMART SM00028 603 636 190.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AM393_RS09170 21078bea50e459748f17326c3ebec377 1158 SMART SM00028 304 337 0.063 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AM393_RS09170 21078bea50e459748f17326c3ebec377 1158 SMART SM00028 352 385 36.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AM393_RS09170 21078bea50e459748f17326c3ebec377 1158 SMART SM00028 386 418 110.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AM393_RS09170 21078bea50e459748f17326c3ebec377 1158 SMART SM00028 461 494 120.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AM393_RS09170 21078bea50e459748f17326c3ebec377 1158 SMART SM00028 270 303 130.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AM393_RS09170 21078bea50e459748f17326c3ebec377 1158 SUPERFAMILY SSF48452 276 534 4.4E-17 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM393_RS09170 21078bea50e459748f17326c3ebec377 1158 Gene3D G3DSA:1.25.40.10 558 1139 4.0E-17 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM393_RS09170 21078bea50e459748f17326c3ebec377 1158 SUPERFAMILY SSF48452 577 738 3.25E-10 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM393_RS07590 78f513c829bb103f532d535099483e06 85 SUPERFAMILY SSF110324 2 81 1.4E-34 T 28-03-2018 AM393_RS07590 78f513c829bb103f532d535099483e06 85 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 83 6.2E-44 T 28-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS07590 78f513c829bb103f532d535099483e06 85 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 71 2.0E-17 T 28-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS07590 78f513c829bb103f532d535099483e06 85 Gene3D G3DSA:2.40.50.100 20 84 1.7E-31 T 28-03-2018 AM393_RS07590 78f513c829bb103f532d535099483e06 85 PRINTS PR00063 Ribosomal protein L27 signature 29 53 3.2E-39 T 28-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS07590 78f513c829bb103f532d535099483e06 85 PRINTS PR00063 Ribosomal protein L27 signature 54 78 3.2E-39 T 28-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS07590 78f513c829bb103f532d535099483e06 85 PRINTS PR00063 Ribosomal protein L27 signature 4 28 3.2E-39 T 28-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS07590 78f513c829bb103f532d535099483e06 85 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 28-03-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM393_RS07590 78f513c829bb103f532d535099483e06 85 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 29.565 T 28-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS07590 78f513c829bb103f532d535099483e06 85 Pfam PF01016 Ribosomal L27 protein 2 82 2.3E-39 T 28-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS07720 f7326f52dd459ce46d49710b226ac1ae 354 PIRSF PIRSF016049 1 354 5.9E-120 T 28-03-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 AM393_RS07720 f7326f52dd459ce46d49710b226ac1ae 354 SUPERFAMILY SSF51658 1 349 7.15E-88 T 28-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AM393_RS07720 f7326f52dd459ce46d49710b226ac1ae 354 Gene3D G3DSA:3.20.20.150 1 354 2.9E-105 T 28-03-2018 AM393_RS07720 f7326f52dd459ce46d49710b226ac1ae 354 Pfam PF03786 D-mannonate dehydratase (UxuA) 1 353 1.1E-157 T 28-03-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 AM393_RS07720 f7326f52dd459ce46d49710b226ac1ae 354 TIGRFAM TIGR00695 uxuA: mannonate dehydratase 154 353 1.1E-64 T 28-03-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 AM393_RS07720 f7326f52dd459ce46d49710b226ac1ae 354 Hamap MF_00106 Mannonate dehydratase [uxuA]. 1 354 168.537 T 28-03-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 AM393_RS21520 7e536e8113a4df5299c08846ce722c4b 196 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 1 161 7.4E-34 T 28-03-2018 IPR007404 LexA-binding, inner membrane-associated putative hydrolase AM393_RS21520 7e536e8113a4df5299c08846ce722c4b 196 PIRSF PIRSF030780 1 195 4.7E-116 T 28-03-2018 IPR016956 Inner membrane protein YdjM AM393_RS00715 2167f6bfd4e4c566b1e8805fc946afee 188 Pfam PF00857 Isochorismatase family 9 183 3.0E-39 T 28-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AM393_RS00715 2167f6bfd4e4c566b1e8805fc946afee 188 Gene3D G3DSA:3.40.50.850 3 188 9.1E-46 T 28-03-2018 AM393_RS00715 2167f6bfd4e4c566b1e8805fc946afee 188 SUPERFAMILY SSF52499 4 188 1.44E-49 T 28-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AM393_RS14815 3ac62bf33de0ef43159a8bd7156dbf8b 121 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 36 118 6.6E-29 T 28-03-2018 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 AM393_RS14815 3ac62bf33de0ef43159a8bd7156dbf8b 121 Pfam PF04999 Cell division protein FtsL 25 119 1.1E-35 T 28-03-2018 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 AM393_RS14815 3ac62bf33de0ef43159a8bd7156dbf8b 121 Hamap MF_00910 Cell division protein FtsL [ftsL]. 35 118 16.764 T 28-03-2018 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 AM393_RS10970 0537cfec1ea67eb5cea0af2182286f43 308 TIGRFAM TIGR00751 menA: 1,4-dihydroxy-2-naphthoate octaprenyltransferase 17 300 1.8E-138 T 28-03-2018 AM393_RS10970 0537cfec1ea67eb5cea0af2182286f43 308 Pfam PF01040 UbiA prenyltransferase family 26 270 3.6E-40 T 28-03-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 AM393_RS10970 0537cfec1ea67eb5cea0af2182286f43 308 Hamap MF_01937 1,4-dihydroxy-2-naphthoate octaprenyltransferase [menA]. 8 301 21.115 T 28-03-2018 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase GO:0009234|GO:0016021|GO:0046428 KEGG: 00130+2.5.1.74|MetaCyc: PWY-5839|MetaCyc: PWY-5851|MetaCyc: PWY-5852|MetaCyc: PWY-5853|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 AM393_RS10970 0537cfec1ea67eb5cea0af2182286f43 308 PIRSF PIRSF005355 2 306 3.8E-94 T 28-03-2018 IPR026046 UbiA prenyltransferase domain containing protein 1 GO:0004659 Reactome: R-HSA-6806664 AM393_RS06165 a2fca5513726f15edd93bff088366ce0 243 Gene3D G3DSA:3.40.1280.10 74 243 5.4E-55 T 28-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AM393_RS06165 a2fca5513726f15edd93bff088366ce0 243 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 2 242 1.1E-89 T 28-03-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AM393_RS06165 a2fca5513726f15edd93bff088366ce0 243 Pfam PF04452 RNA methyltransferase 19 236 4.4E-72 T 28-03-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AM393_RS06165 a2fca5513726f15edd93bff088366ce0 243 SUPERFAMILY SSF88697 2 70 1.07E-17 T 28-03-2018 IPR015947 PUA-like domain AM393_RS06165 a2fca5513726f15edd93bff088366ce0 243 PIRSF PIRSF015601 3 242 1.1E-51 T 28-03-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AM393_RS06165 a2fca5513726f15edd93bff088366ce0 243 SUPERFAMILY SSF75217 75 242 2.25E-50 T 28-03-2018 IPR029028 Alpha/beta knot methyltransferases AM393_RS06165 a2fca5513726f15edd93bff088366ce0 243 Gene3D G3DSA:2.40.240.20 1 73 1.7E-22 T 28-03-2018 AM393_RS23915 9cee2a8c7a83d8aafd841d62a9533170 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 2.1E-44 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS23915 9cee2a8c7a83d8aafd841d62a9533170 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 2.1E-44 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS23915 9cee2a8c7a83d8aafd841d62a9533170 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 2.1E-44 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS23915 9cee2a8c7a83d8aafd841d62a9533170 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 2.1E-44 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS23915 9cee2a8c7a83d8aafd841d62a9533170 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 2.1E-44 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS23915 9cee2a8c7a83d8aafd841d62a9533170 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 2.1E-44 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS23915 9cee2a8c7a83d8aafd841d62a9533170 244 SUPERFAMILY SSF51735 6 243 1.22E-84 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS23915 9cee2a8c7a83d8aafd841d62a9533170 244 Gene3D G3DSA:3.40.50.720 1 43 1.7E-11 T 28-03-2018 AM393_RS23915 9cee2a8c7a83d8aafd841d62a9533170 244 Gene3D G3DSA:3.40.50.720 44 244 5.0E-67 T 28-03-2018 AM393_RS23915 9cee2a8c7a83d8aafd841d62a9533170 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 5.4E-15 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS23915 9cee2a8c7a83d8aafd841d62a9533170 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 5.4E-15 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS23915 9cee2a8c7a83d8aafd841d62a9533170 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 5.4E-15 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS23915 9cee2a8c7a83d8aafd841d62a9533170 244 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM393_RS23915 9cee2a8c7a83d8aafd841d62a9533170 244 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 183 1.4E-5 T 28-03-2018 AM393_RS23915 9cee2a8c7a83d8aafd841d62a9533170 244 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 242 4.4E-68 T 28-03-2018 AM393_RS01725 cf6d08c0295b03be51d3e9b4cb10edc1 388 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 378 5.4E-104 T 28-03-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 AM393_RS01725 cf6d08c0295b03be51d3e9b4cb10edc1 388 SUPERFAMILY SSF48179 191 287 1.7E-29 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AM393_RS01725 cf6d08c0295b03be51d3e9b4cb10edc1 388 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 168 5.4E-34 T 28-03-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AM393_RS01725 cf6d08c0295b03be51d3e9b4cb10edc1 388 Gene3D G3DSA:1.20.5.100 194 211 1.2E-13 T 28-03-2018 AM393_RS01725 cf6d08c0295b03be51d3e9b4cb10edc1 388 Gene3D G3DSA:3.40.50.720 288 388 5.5E-17 T 28-03-2018 AM393_RS01725 cf6d08c0295b03be51d3e9b4cb10edc1 388 Gene3D G3DSA:3.40.50.720 1 193 9.3E-51 T 28-03-2018 AM393_RS01725 cf6d08c0295b03be51d3e9b4cb10edc1 388 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 301 375 5.2E-7 T 28-03-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AM393_RS01725 cf6d08c0295b03be51d3e9b4cb10edc1 388 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 192 281 3.2E-26 T 28-03-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AM393_RS01725 cf6d08c0295b03be51d3e9b4cb10edc1 388 SUPERFAMILY SSF52413 283 388 1.28E-27 T 28-03-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AM393_RS01725 cf6d08c0295b03be51d3e9b4cb10edc1 388 Gene3D G3DSA:1.10.1040.10 212 287 1.9E-26 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AM393_RS01725 cf6d08c0295b03be51d3e9b4cb10edc1 388 SMART SM00984 300 387 4.0E-13 T 28-03-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AM393_RS01725 cf6d08c0295b03be51d3e9b4cb10edc1 388 PIRSF PIRSF500134 1 342 3.4E-118 T 28-03-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 AM393_RS01725 cf6d08c0295b03be51d3e9b4cb10edc1 388 PIRSF PIRSF500134 338 388 0.0041 T 28-03-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 AM393_RS01725 cf6d08c0295b03be51d3e9b4cb10edc1 388 PIRSF PIRSF000124 1 388 6.1E-137 T 28-03-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 AM393_RS01725 cf6d08c0295b03be51d3e9b4cb10edc1 388 SUPERFAMILY SSF51735 1 194 1.0E-47 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS16780 b38f849ed79b14d12ba7ba6ab8e94eff 558 SUPERFAMILY SSF51735 418 550 1.82E-29 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS16780 b38f849ed79b14d12ba7ba6ab8e94eff 558 Pfam PF02254 TrkA-N domain 421 534 6.5E-24 T 28-03-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AM393_RS16780 b38f849ed79b14d12ba7ba6ab8e94eff 558 Gene3D G3DSA:1.20.91.10 239 320 2.7E-6 T 28-03-2018 AM393_RS16780 b38f849ed79b14d12ba7ba6ab8e94eff 558 Pfam PF00999 Sodium/hydrogen exchanger family 13 384 3.9E-77 T 28-03-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AM393_RS16780 b38f849ed79b14d12ba7ba6ab8e94eff 558 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 15 294 7.7E-77 T 28-03-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 AM393_RS16780 b38f849ed79b14d12ba7ba6ab8e94eff 558 Gene3D G3DSA:3.40.50.720 416 550 7.7E-16 T 28-03-2018 AM393_RS16855 b7f5539d2c8dcbe985f77991b7ac3c34 228 Pfam PF00005 ABC transporter 27 174 1.8E-29 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS16855 b7f5539d2c8dcbe985f77991b7ac3c34 228 SMART SM00382 35 221 9.0E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS16855 b7f5539d2c8dcbe985f77991b7ac3c34 228 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS16855 b7f5539d2c8dcbe985f77991b7ac3c34 228 SUPERFAMILY SSF52540 6 226 6.83E-62 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS16855 b7f5539d2c8dcbe985f77991b7ac3c34 228 Gene3D G3DSA:3.40.50.300 2 228 3.3E-60 T 28-03-2018 AM393_RS02295 2b0a16bb88929c61b5a78f94de7276e6 601 Gene3D G3DSA:3.40.190.10 204 314 2.3E-17 T 28-03-2018 AM393_RS02295 2b0a16bb88929c61b5a78f94de7276e6 601 SUPERFAMILY SSF53850 50 589 4.34E-107 T 28-03-2018 AM393_RS02295 2b0a16bb88929c61b5a78f94de7276e6 601 Gene3D G3DSA:3.90.76.10 63 203 5.0E-23 T 28-03-2018 AM393_RS02295 2b0a16bb88929c61b5a78f94de7276e6 601 PIRSF PIRSF002741 4 592 9.2E-156 T 28-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AM393_RS02295 2b0a16bb88929c61b5a78f94de7276e6 601 Gene3D G3DSA:3.10.105.10 315 560 1.0E-46 T 28-03-2018 AM393_RS02295 2b0a16bb88929c61b5a78f94de7276e6 601 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 98 502 3.7E-69 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain AM393_RS24310 a3d93dff7bee5d7dcc323a9476fe3a0e 279 SUPERFAMILY SSF46689 2 79 1.13E-18 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS24310 a3d93dff7bee5d7dcc323a9476fe3a0e 279 SUPERFAMILY SSF53697 94 250 1.45E-11 T 28-03-2018 AM393_RS24310 a3d93dff7bee5d7dcc323a9476fe3a0e 279 Pfam PF01380 SIS domain 126 245 2.8E-9 T 28-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AM393_RS24310 a3d93dff7bee5d7dcc323a9476fe3a0e 279 Gene3D G3DSA:1.10.10.10 1 76 1.2E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS24310 a3d93dff7bee5d7dcc323a9476fe3a0e 279 Gene3D G3DSA:3.40.50.10490 82 279 1.9E-16 T 28-03-2018 AM393_RS24310 a3d93dff7bee5d7dcc323a9476fe3a0e 279 Pfam PF01418 Helix-turn-helix domain, rpiR family 3 72 2.1E-12 T 28-03-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 AM393_RS28540 d1c7f90780a98dc73727c26439035fd5 327 SMART SM00974 5 79 1.1E-7 T 28-03-2018 IPR018306 Bacteriophage T5, Orf172 DNA-binding AM393_RS28540 d1c7f90780a98dc73727c26439035fd5 327 Pfam PF10544 T5orf172 domain 6 76 9.9E-11 T 28-03-2018 IPR018306 Bacteriophage T5, Orf172 DNA-binding AM393_RS13640 638d5b40052cd53a1a293f2712df7532 1049 Gene3D G3DSA:1.20.1640.10 824 1049 1.1E-30 T 28-03-2018 AM393_RS13640 638d5b40052cd53a1a293f2712df7532 1049 Gene3D G3DSA:1.20.1640.10 287 517 2.8E-44 T 28-03-2018 AM393_RS13640 638d5b40052cd53a1a293f2712df7532 1049 Gene3D G3DSA:3.30.70.1430 567 665 1.3E-8 T 28-03-2018 AM393_RS13640 638d5b40052cd53a1a293f2712df7532 1049 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1047 0.0 T 28-03-2018 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 AM393_RS13640 638d5b40052cd53a1a293f2712df7532 1049 SUPERFAMILY SSF82714 186 269 4.19E-20 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM393_RS13640 638d5b40052cd53a1a293f2712df7532 1049 SUPERFAMILY SSF82693 271 328 1.15E-21 T 28-03-2018 AM393_RS13640 638d5b40052cd53a1a293f2712df7532 1049 SUPERFAMILY SSF82693 137 184 1.15E-21 T 28-03-2018 AM393_RS13640 638d5b40052cd53a1a293f2712df7532 1049 SUPERFAMILY SSF82693 46 126 6.8E-20 T 28-03-2018 AM393_RS13640 638d5b40052cd53a1a293f2712df7532 1049 Gene3D G3DSA:3.30.2090.10 723 809 1.8E-18 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM393_RS13640 638d5b40052cd53a1a293f2712df7532 1049 Gene3D G3DSA:3.30.2090.10 183 271 1.2E-18 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM393_RS13640 638d5b40052cd53a1a293f2712df7532 1049 SUPERFAMILY SSF82866 294 505 3.79E-40 T 28-03-2018 AM393_RS13640 638d5b40052cd53a1a293f2712df7532 1049 SUPERFAMILY SSF82866 805 1039 3.53E-44 T 28-03-2018 AM393_RS13640 638d5b40052cd53a1a293f2712df7532 1049 SUPERFAMILY SSF82714 723 807 2.62E-16 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM393_RS13640 638d5b40052cd53a1a293f2712df7532 1049 PRINTS PR00702 Acriflavin resistance protein family signature 389 413 5.9E-23 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS13640 638d5b40052cd53a1a293f2712df7532 1049 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 5.9E-23 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS13640 638d5b40052cd53a1a293f2712df7532 1049 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 5.9E-23 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS13640 638d5b40052cd53a1a293f2712df7532 1049 PRINTS PR00702 Acriflavin resistance protein family signature 334 357 5.9E-23 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS13640 638d5b40052cd53a1a293f2712df7532 1049 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 5.9E-23 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS13640 638d5b40052cd53a1a293f2712df7532 1049 PRINTS PR00702 Acriflavin resistance protein family signature 361 382 5.9E-23 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS13640 638d5b40052cd53a1a293f2712df7532 1049 Gene3D G3DSA:3.30.70.1430 45 140 3.9E-20 T 28-03-2018 AM393_RS13640 638d5b40052cd53a1a293f2712df7532 1049 Pfam PF00873 AcrB/AcrD/AcrF family 6 1037 3.9E-236 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS09565 e89778933c4912574682c9406c6d4ef0 273 Gene3D G3DSA:2.160.10.10 136 268 2.8E-30 T 28-03-2018 AM393_RS09565 e89778933c4912574682c9406c6d4ef0 273 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 193 226 6.2E-10 T 28-03-2018 IPR001451 Hexapeptide repeat AM393_RS09565 e89778933c4912574682c9406c6d4ef0 273 SMART SM00971 9 113 4.7E-65 T 28-03-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274 AM393_RS09565 e89778933c4912574682c9406c6d4ef0 273 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 202 230 - T 28-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AM393_RS09565 e89778933c4912574682c9406c6d4ef0 273 Gene3D G3DSA:1.10.3130.10 2 135 4.7E-39 T 28-03-2018 AM393_RS09565 e89778933c4912574682c9406c6d4ef0 273 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 82 242 1.7E-75 T 28-03-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274 AM393_RS09565 e89778933c4912574682c9406c6d4ef0 273 SUPERFAMILY SSF51161 4 260 1.94E-68 T 28-03-2018 IPR011004 Trimeric LpxA-like AM393_RS09565 e89778933c4912574682c9406c6d4ef0 273 Pfam PF06426 Serine acetyltransferase, N-terminal 9 113 1.2E-39 T 28-03-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274 AM393_RS09565 e89778933c4912574682c9406c6d4ef0 273 PIRSF PIRSF000441 75 266 2.7E-61 T 28-03-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274 AM393_RS19725 271b41ba4140ca8a910e7807f0ba9a76 238 SMART SM00448 3 114 1.2E-41 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM393_RS19725 271b41ba4140ca8a910e7807f0ba9a76 238 Gene3D G3DSA:3.40.50.2300 2 124 1.5E-35 T 28-03-2018 AM393_RS19725 271b41ba4140ca8a910e7807f0ba9a76 238 SUPERFAMILY SSF52172 3 127 1.42E-40 T 28-03-2018 IPR011006 CheY-like superfamily AM393_RS19725 271b41ba4140ca8a910e7807f0ba9a76 238 Pfam PF00072 Response regulator receiver domain 5 114 2.5E-27 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM393_RS19725 271b41ba4140ca8a910e7807f0ba9a76 238 SUPERFAMILY SSF46894 131 230 7.66E-32 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM393_RS19725 271b41ba4140ca8a910e7807f0ba9a76 238 SMART SM00862 153 229 5.7E-31 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM393_RS19725 271b41ba4140ca8a910e7807f0ba9a76 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 229 3.1E-28 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM393_RS19725 271b41ba4140ca8a910e7807f0ba9a76 238 Gene3D G3DSA:1.10.10.10 125 236 4.5E-35 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS22805 d4a147d8d3d8690f1fe75124c2d1e04c 440 Pfam PF00083 Sugar (and other) transporter 18 233 5.6E-23 T 28-03-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 AM393_RS22805 d4a147d8d3d8690f1fe75124c2d1e04c 440 Gene3D G3DSA:1.20.1250.20 3 209 4.0E-20 T 28-03-2018 AM393_RS22805 d4a147d8d3d8690f1fe75124c2d1e04c 440 Gene3D G3DSA:1.20.1250.20 219 429 3.8E-22 T 28-03-2018 AM393_RS22805 d4a147d8d3d8690f1fe75124c2d1e04c 440 SUPERFAMILY SSF103473 14 425 1.15E-60 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS22805 d4a147d8d3d8690f1fe75124c2d1e04c 440 Pfam PF07690 Major Facilitator Superfamily 255 423 3.5E-11 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS15350 7c31680f562a0d772d08334eb08e0d3d 285 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 239 265 - T 28-03-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 AM393_RS15350 7c31680f562a0d772d08334eb08e0d3d 285 Pfam PF01148 Cytidylyltransferase family 4 278 1.4E-69 T 28-03-2018 AM393_RS23755 fc71426257d09044a4dd7f21a332c85d 459 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 356 376 - T 28-03-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 AM393_RS23755 fc71426257d09044a4dd7f21a332c85d 459 TIGRFAM TIGR03173 pbuX: xanthine permease 26 440 2.9E-132 T 28-03-2018 IPR017588 Uric acid permease UacT-like GO:0006810|GO:0016021 AM393_RS23755 fc71426257d09044a4dd7f21a332c85d 459 Pfam PF00860 Permease family 23 407 3.3E-81 T 28-03-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 AM393_RS23755 fc71426257d09044a4dd7f21a332c85d 459 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 18 438 3.7E-105 T 28-03-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 AM393_RS14240 a5a9255feb5afe410b433f6f0ba813f4 215 Gene3D G3DSA:3.30.450.20 30 126 1.7E-6 T 28-03-2018 AM393_RS14240 a5a9255feb5afe410b433f6f0ba813f4 215 Pfam PF10144 Bacterial virulence factor haemolysin 1 160 6.9E-65 T 28-03-2018 IPR019305 Uncharacterised protein family Smp AM393_RS18610 cb2857dc9e0c7ef99ddfa11d23c63f19 218 SUPERFAMILY SSF160467 5 92 9.02E-9 T 28-03-2018 AM393_RS18610 cb2857dc9e0c7ef99ddfa11d23c63f19 218 SMART SM00796 4 202 4.9E-93 T 28-03-2018 IPR003833 Carboxyltransferase domain, subdomain C and D AM393_RS18610 cb2857dc9e0c7ef99ddfa11d23c63f19 218 SUPERFAMILY SSF50891 89 214 1.29E-46 T 28-03-2018 IPR029000 Cyclophilin-like domain AM393_RS18610 cb2857dc9e0c7ef99ddfa11d23c63f19 218 TIGRFAM TIGR00370 TIGR00370: sensor histidine kinase inhibitor, KipI family 9 211 2.3E-95 T 28-03-2018 IPR010016 KipI family AM393_RS18610 cb2857dc9e0c7ef99ddfa11d23c63f19 218 Pfam PF02682 Carboxyltransferase domain, subdomain C and D 6 202 3.5E-69 T 28-03-2018 IPR003833 Carboxyltransferase domain, subdomain C and D AM393_RS18610 cb2857dc9e0c7ef99ddfa11d23c63f19 218 Gene3D G3DSA:2.40.100.10 86 217 2.4E-52 T 28-03-2018 IPR029000 Cyclophilin-like domain AM393_RS18610 cb2857dc9e0c7ef99ddfa11d23c63f19 218 Gene3D G3DSA:3.30.1360.40 1 82 2.5E-8 T 28-03-2018 IPR024946 Arginine repressor C-terminal-like domain Reactome: R-HSA-4615885 AM393_RS16615 43f76317296bd2fd44f939c45a63d067 369 Gene3D G3DSA:2.40.50.140 291 345 2.6E-9 T 28-03-2018 AM393_RS16615 43f76317296bd2fd44f939c45a63d067 369 SUPERFAMILY SSF52540 4 243 4.62E-86 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS16615 43f76317296bd2fd44f939c45a63d067 369 SMART SM00382 28 211 4.5E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS16615 43f76317296bd2fd44f939c45a63d067 369 SUPERFAMILY SSF50331 236 356 2.33E-26 T 28-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal AM393_RS16615 43f76317296bd2fd44f939c45a63d067 369 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS16615 43f76317296bd2fd44f939c45a63d067 369 Gene3D G3DSA:2.40.50.100 239 290 1.1E-9 T 28-03-2018 AM393_RS16615 43f76317296bd2fd44f939c45a63d067 369 Gene3D G3DSA:3.40.50.300 1 238 1.1E-69 T 28-03-2018 AM393_RS16615 43f76317296bd2fd44f939c45a63d067 369 Pfam PF00005 ABC transporter 19 161 1.4E-33 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS02370 92f4c4d8e08aa3ab18784c9eb39ff88e 586 Pfam PF11893 Domain of unknown function (DUF3413) 6 252 1.6E-103 T 28-03-2018 IPR024588 Inner membrane protein YejM, N-terminal AM393_RS02370 92f4c4d8e08aa3ab18784c9eb39ff88e 586 Pfam PF00884 Sulfatase 261 500 8.8E-28 T 28-03-2018 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 AM393_RS02370 92f4c4d8e08aa3ab18784c9eb39ff88e 586 SUPERFAMILY SSF53649 259 559 2.47E-50 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AM393_RS02370 92f4c4d8e08aa3ab18784c9eb39ff88e 586 Gene3D G3DSA:3.40.720.10 259 535 1.6E-30 T 28-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AM393_RS02370 92f4c4d8e08aa3ab18784c9eb39ff88e 586 PIRSF PIRSF004950 6 586 1.4E-218 T 28-03-2018 IPR012159 Inner membrane protein YejM AM393_RS05525 60fe27912d73a584a9e9f2599d657d63 375 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS05525 60fe27912d73a584a9e9f2599d657d63 375 SUPERFAMILY SSF50331 243 373 4.62E-23 T 28-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal AM393_RS05525 60fe27912d73a584a9e9f2599d657d63 375 Gene3D G3DSA:2.40.50.140 299 355 5.7E-10 T 28-03-2018 AM393_RS05525 60fe27912d73a584a9e9f2599d657d63 375 Gene3D G3DSA:2.40.50.100 246 298 8.0E-8 T 28-03-2018 AM393_RS05525 60fe27912d73a584a9e9f2599d657d63 375 SUPERFAMILY SSF52540 6 247 8.36E-79 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS05525 60fe27912d73a584a9e9f2599d657d63 375 SMART SM00382 29 217 2.3E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS05525 60fe27912d73a584a9e9f2599d657d63 375 Pfam PF08402 TOBE domain 289 365 2.6E-5 T 28-03-2018 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 AM393_RS05525 60fe27912d73a584a9e9f2599d657d63 375 Pfam PF00005 ABC transporter 21 162 2.4E-28 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS05525 60fe27912d73a584a9e9f2599d657d63 375 Gene3D G3DSA:3.40.50.300 2 245 1.9E-67 T 28-03-2018 AM393_RS08790 a99f153b1b39b7f9b0a84dd9a73d1462 162 Pfam PF04519 Polymer-forming cytoskeletal 36 132 6.0E-21 T 28-03-2018 IPR007607 Protein of unknown function DUF583 AM393_RS15870 7854d2d55703b5e1960bd1818a798935 350 SUPERFAMILY SSF56935 22 350 2.38E-79 T 28-03-2018 AM393_RS15870 7854d2d55703b5e1960bd1818a798935 350 Pfam PF00267 Gram-negative porin 27 350 5.8E-144 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 AM393_RS15870 7854d2d55703b5e1960bd1818a798935 350 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 94 104 1.4E-15 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 AM393_RS15870 7854d2d55703b5e1960bd1818a798935 350 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 151 162 1.4E-15 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 AM393_RS15870 7854d2d55703b5e1960bd1818a798935 350 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 305 322 1.4E-15 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 AM393_RS15870 7854d2d55703b5e1960bd1818a798935 350 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 52 63 1.4E-15 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 AM393_RS15870 7854d2d55703b5e1960bd1818a798935 350 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 227 239 1.4E-15 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 AM393_RS15870 7854d2d55703b5e1960bd1818a798935 350 ProSitePatterns PS00576 General diffusion Gram-negative porins signature. 305 321 - T 28-03-2018 IPR013793 Porin, Gram-negative type, conserved site AM393_RS15870 7854d2d55703b5e1960bd1818a798935 350 Gene3D G3DSA:2.40.160.10 6 350 3.0E-53 T 28-03-2018 AM393_RS15870 7854d2d55703b5e1960bd1818a798935 350 PRINTS PR00183 E.coli/Salmonella-type porin signature 51 69 1.8E-71 T 28-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 AM393_RS15870 7854d2d55703b5e1960bd1818a798935 350 PRINTS PR00183 E.coli/Salmonella-type porin signature 94 116 1.8E-71 T 28-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 AM393_RS15870 7854d2d55703b5e1960bd1818a798935 350 PRINTS PR00183 E.coli/Salmonella-type porin signature 149 171 1.8E-71 T 28-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 AM393_RS15870 7854d2d55703b5e1960bd1818a798935 350 PRINTS PR00183 E.coli/Salmonella-type porin signature 261 280 1.8E-71 T 28-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 AM393_RS15870 7854d2d55703b5e1960bd1818a798935 350 PRINTS PR00183 E.coli/Salmonella-type porin signature 233 250 1.8E-71 T 28-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 AM393_RS15870 7854d2d55703b5e1960bd1818a798935 350 PRINTS PR00183 E.coli/Salmonella-type porin signature 22 38 1.8E-71 T 28-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 AM393_RS00400 8e242e7ac0e1536a3b70e44049bd7214 519 Gene3D G3DSA:3.10.580.10 281 427 3.4E-21 T 28-03-2018 AM393_RS00400 8e242e7ac0e1536a3b70e44049bd7214 519 Pfam PF03741 Integral membrane protein TerC family 14 203 6.3E-49 T 28-03-2018 IPR005496 Integral membrane protein TerC GO:0016021 AM393_RS00400 8e242e7ac0e1536a3b70e44049bd7214 519 Gene3D G3DSA:3.30.465.10 428 511 1.5E-17 T 28-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AM393_RS00400 8e242e7ac0e1536a3b70e44049bd7214 519 SUPERFAMILY SSF56176 432 518 5.73E-18 T 28-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AM393_RS00400 8e242e7ac0e1536a3b70e44049bd7214 519 SMART SM01091 431 512 3.0E-22 T 28-03-2018 IPR005170 Transporter-associated domain AM393_RS00400 8e242e7ac0e1536a3b70e44049bd7214 519 Pfam PF03471 Transporter associated domain 432 509 2.2E-17 T 28-03-2018 IPR005170 Transporter-associated domain AM393_RS00400 8e242e7ac0e1536a3b70e44049bd7214 519 SUPERFAMILY SSF54631 288 422 3.66E-21 T 28-03-2018 AM393_RS28085 25284933b8876039bb77dd7d95fde788 576 Pfam PF07510 Protein of unknown function (DUF1524) 431 554 9.2E-22 T 28-03-2018 IPR011089 Domain of unknown function DUF1524 AM393_RS28085 25284933b8876039bb77dd7d95fde788 576 Pfam PF03235 Protein of unknown function DUF262 12 231 8.5E-37 T 28-03-2018 IPR004919 Domain of unknown function DUF262 AM393_RS15200 b168e4de620c89518f61d38181f07435 280 Gene3D G3DSA:2.30.42.10 122 279 3.2E-10 T 28-03-2018 AM393_RS15200 b168e4de620c89518f61d38181f07435 280 TIGRFAM TIGR01713 typeII_sec_gspC: type II secretion system protein C 22 275 4.0E-78 T 28-03-2018 IPR001639 Type II secretion system protein C GO:0008565|GO:0015627|GO:0015628 AM393_RS15200 b168e4de620c89518f61d38181f07435 280 Pfam PF11356 Type II secretion system protein C 27 162 5.2E-23 T 28-03-2018 IPR024961 Type II secretion system protein C, N-terminal AM393_RS15200 b168e4de620c89518f61d38181f07435 280 SUPERFAMILY SSF50156 180 275 3.29E-17 T 28-03-2018 IPR001478 PDZ domain GO:0005515 AM393_RS15200 b168e4de620c89518f61d38181f07435 280 ProSitePatterns PS01141 Bacterial type II secretion system protein C signature. 215 241 - T 28-03-2018 IPR001639 Type II secretion system protein C GO:0008565|GO:0015627|GO:0015628 AM393_RS08910 c08bd02264e5600c851aa0c09923b952 222 SUPERFAMILY SSF52540 1 216 1.29E-66 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS08910 c08bd02264e5600c851aa0c09923b952 222 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 213 3.4E-92 T 28-03-2018 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 AM393_RS08910 c08bd02264e5600c851aa0c09923b952 222 Pfam PF00005 ABC transporter 18 165 4.9E-37 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS08910 c08bd02264e5600c851aa0c09923b952 222 Gene3D G3DSA:3.40.50.300 1 218 8.1E-62 T 28-03-2018 AM393_RS08910 c08bd02264e5600c851aa0c09923b952 222 SMART SM00382 27 214 1.1E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS08910 c08bd02264e5600c851aa0c09923b952 222 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS12210 8923b6520eab12f8b2e169642d000ff6 277 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 76 262 2.0E-12 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS12210 8923b6520eab12f8b2e169642d000ff6 277 Gene3D G3DSA:1.10.3720.10 6 273 4.6E-34 T 28-03-2018 AM393_RS12210 8923b6520eab12f8b2e169642d000ff6 277 SUPERFAMILY SSF161098 5 271 2.35E-35 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS14405 ea0635925bd51740af78a16e0294b6fa 638 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 192 205 - T 28-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AM393_RS14405 ea0635925bd51740af78a16e0294b6fa 638 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 603 1.4E-292 T 28-03-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613 AM393_RS14405 ea0635925bd51740af78a16e0294b6fa 638 Gene3D G3DSA:1.20.1270.10 532 619 3.7E-20 T 28-03-2018 IPR029048 Heat shock protein 70kD, C-terminal domain AM393_RS14405 ea0635925bd51740af78a16e0294b6fa 638 Pfam PF00012 Hsp70 protein 4 602 3.3E-268 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM393_RS14405 ea0635925bd51740af78a16e0294b6fa 638 SUPERFAMILY SSF53067 4 183 2.94E-65 T 28-03-2018 AM393_RS14405 ea0635925bd51740af78a16e0294b6fa 638 Gene3D G3DSA:3.30.420.40 197 366 7.5E-46 T 28-03-2018 AM393_RS14405 ea0635925bd51740af78a16e0294b6fa 638 SUPERFAMILY SSF53067 187 382 1.17E-68 T 28-03-2018 AM393_RS14405 ea0635925bd51740af78a16e0294b6fa 638 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 337 351 - T 28-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AM393_RS14405 ea0635925bd51740af78a16e0294b6fa 638 PRINTS PR00301 70kDa heat shock protein signature 469 485 8.2E-81 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM393_RS14405 ea0635925bd51740af78a16e0294b6fa 638 PRINTS PR00301 70kDa heat shock protein signature 138 158 8.2E-81 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM393_RS14405 ea0635925bd51740af78a16e0294b6fa 638 PRINTS PR00301 70kDa heat shock protein signature 198 208 8.2E-81 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM393_RS14405 ea0635925bd51740af78a16e0294b6fa 638 PRINTS PR00301 70kDa heat shock protein signature 31 43 8.2E-81 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM393_RS14405 ea0635925bd51740af78a16e0294b6fa 638 PRINTS PR00301 70kDa heat shock protein signature 54 62 8.2E-81 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM393_RS14405 ea0635925bd51740af78a16e0294b6fa 638 PRINTS PR00301 70kDa heat shock protein signature 334 350 8.2E-81 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM393_RS14405 ea0635925bd51740af78a16e0294b6fa 638 PRINTS PR00301 70kDa heat shock protein signature 3 16 8.2E-81 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM393_RS14405 ea0635925bd51740af78a16e0294b6fa 638 PRINTS PR00301 70kDa heat shock protein signature 388 407 8.2E-81 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM393_RS14405 ea0635925bd51740af78a16e0294b6fa 638 PRINTS PR00301 70kDa heat shock protein signature 365 385 8.2E-81 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM393_RS14405 ea0635925bd51740af78a16e0294b6fa 638 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 634 37.049 T 28-03-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613 AM393_RS14405 ea0635925bd51740af78a16e0294b6fa 638 SUPERFAMILY SSF100934 507 602 1.44E-28 T 28-03-2018 IPR029048 Heat shock protein 70kD, C-terminal domain AM393_RS14405 ea0635925bd51740af78a16e0294b6fa 638 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 28-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AM393_RS14405 ea0635925bd51740af78a16e0294b6fa 638 Gene3D G3DSA:2.60.34.10 390 531 2.6E-65 T 28-03-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 AM393_RS14405 ea0635925bd51740af78a16e0294b6fa 638 Gene3D G3DSA:3.30.420.40 1 196 3.7E-80 T 28-03-2018 AM393_RS14405 ea0635925bd51740af78a16e0294b6fa 638 SUPERFAMILY SSF100920 384 539 1.44E-61 T 28-03-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 AM393_RS05900 daa89647073d2c9d3fab1a79ae412dd2 477 PRINTS PR00131 Glycosyl hydrolase family 1 signature 306 320 1.1E-14 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AM393_RS05900 daa89647073d2c9d3fab1a79ae412dd2 477 PRINTS PR00131 Glycosyl hydrolase family 1 signature 414 431 1.1E-14 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AM393_RS05900 daa89647073d2c9d3fab1a79ae412dd2 477 PRINTS PR00131 Glycosyl hydrolase family 1 signature 371 379 1.1E-14 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AM393_RS05900 daa89647073d2c9d3fab1a79ae412dd2 477 PRINTS PR00131 Glycosyl hydrolase family 1 signature 439 451 1.1E-14 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AM393_RS05900 daa89647073d2c9d3fab1a79ae412dd2 477 PRINTS PR00131 Glycosyl hydrolase family 1 signature 392 403 1.1E-14 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AM393_RS05900 daa89647073d2c9d3fab1a79ae412dd2 477 SUPERFAMILY SSF51445 2 470 6.35E-165 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily AM393_RS05900 daa89647073d2c9d3fab1a79ae412dd2 477 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 371 379 - T 28-03-2018 IPR018120 Glycoside hydrolase family 1, active site AM393_RS05900 daa89647073d2c9d3fab1a79ae412dd2 477 Gene3D G3DSA:3.20.20.80 3 477 6.3E-153 T 28-03-2018 AM393_RS05900 daa89647073d2c9d3fab1a79ae412dd2 477 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 10 24 - T 28-03-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site AM393_RS05900 daa89647073d2c9d3fab1a79ae412dd2 477 Pfam PF00232 Glycosyl hydrolase family 1 5 474 1.0E-131 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AM393_RS17105 85ed4b7a4237f1f3e5a48f85d7adc88a 473 Pfam PF06381 Protein of unknown function (DUF1073) 90 425 2.4E-20 T 28-03-2018 IPR024459 Protein of unknown function DUF1073 AM393_RS07595 74cad9490c8cd7e4385322ad98f1e1eb 103 SUPERFAMILY SSF141091 1 102 1.12E-36 T 28-03-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS07595 74cad9490c8cd7e4385322ad98f1e1eb 103 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 28-03-2018 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM393_RS07595 74cad9490c8cd7e4385322ad98f1e1eb 103 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 1.2E-44 T 28-03-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS07595 74cad9490c8cd7e4385322ad98f1e1eb 103 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 26.783 T 28-03-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS07595 74cad9490c8cd7e4385322ad98f1e1eb 103 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 2.8E-37 T 28-03-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS22310 c3beadb5e0160a5452d3dae50a52c0c6 229 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 14 218 1.7E-30 T 28-03-2018 IPR017732 Type IV / VI secretion system, DotU AM393_RS22310 c3beadb5e0160a5452d3dae50a52c0c6 229 Pfam PF09850 Type VI secretion system protein DotU 14 215 1.4E-36 T 28-03-2018 IPR017732 Type IV / VI secretion system, DotU AM393_RS02805 1d4e3b8d82ff82c113c02beef392bd77 260 Gene3D G3DSA:3.40.190.10 15 140 2.2E-37 T 28-03-2018 AM393_RS02805 1d4e3b8d82ff82c113c02beef392bd77 260 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 28 254 8.0E-64 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM393_RS02805 1d4e3b8d82ff82c113c02beef392bd77 260 SMART SM00062 27 256 6.0E-72 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM393_RS02805 1d4e3b8d82ff82c113c02beef392bd77 260 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 4 253 1.4E-99 T 28-03-2018 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter GO:0006810|GO:0030288 AM393_RS02805 1d4e3b8d82ff82c113c02beef392bd77 260 Gene3D G3DSA:3.40.190.10 141 260 2.7E-19 T 28-03-2018 AM393_RS02805 1d4e3b8d82ff82c113c02beef392bd77 260 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 50 63 - T 28-03-2018 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 AM393_RS02805 1d4e3b8d82ff82c113c02beef392bd77 260 SUPERFAMILY SSF53850 1 256 7.76E-67 T 28-03-2018 AM393_RS19515 ed8c5f81eeafd8b4237318eceb41396f 588 Pfam PF06056 Putative ATPase subunit of terminase (gpP-like) 11 68 9.1E-26 T 28-03-2018 IPR010332 ATPase terminase subunit, putative GO:0005524|GO:0019069 AM393_RS19515 ed8c5f81eeafd8b4237318eceb41396f 588 Gene3D G3DSA:1.10.10.60 10 92 4.2E-5 T 28-03-2018 AM393_RS19515 ed8c5f81eeafd8b4237318eceb41396f 588 Pfam PF03237 Terminase-like family 162 382 2.9E-63 T 28-03-2018 AM393_RS19515 ed8c5f81eeafd8b4237318eceb41396f 588 Pfam PF17289 Terminase RNaseH-like domain 410 571 4.4E-45 T 28-03-2018 IPR035421 Terminase, large subunit gp17-like AM393_RS19390 00a153af9f8e6206005d36ad233414be 252 SMART SM00420 8 57 8.7E-12 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM393_RS19390 00a153af9f8e6206005d36ad233414be 252 ProSitePatterns PS00894 DeoR-type HTH domain signature. 8 42 - T 28-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 AM393_RS19390 00a153af9f8e6206005d36ad233414be 252 SUPERFAMILY SSF100950 74 236 8.79E-28 T 28-03-2018 AM393_RS19390 00a153af9f8e6206005d36ad233414be 252 Pfam PF08220 DeoR-like helix-turn-helix domain 8 58 3.3E-13 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM393_RS19390 00a153af9f8e6206005d36ad233414be 252 Gene3D G3DSA:1.10.10.10 1 75 5.5E-9 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS19390 00a153af9f8e6206005d36ad233414be 252 SMART SM01134 73 234 1.4E-52 T 28-03-2018 AM393_RS19390 00a153af9f8e6206005d36ad233414be 252 Gene3D G3DSA:3.40.50.1360 76 236 4.9E-27 T 28-03-2018 AM393_RS19390 00a153af9f8e6206005d36ad233414be 252 Pfam PF00455 DeoR C terminal sensor domain 76 232 1.1E-40 T 28-03-2018 IPR014036 DeoR C-terminal sensor domain AM393_RS26360 16cefbd92df023e9af6cfbab8d328d0d 332 SUPERFAMILY SSF53807 39 326 2.0E-42 T 28-03-2018 AM393_RS26360 16cefbd92df023e9af6cfbab8d328d0d 332 Pfam PF01497 Periplasmic binding protein 43 307 1.1E-33 T 28-03-2018 IPR002491 ABC transporter periplasmic binding domain GO:0005488 AM393_RS26360 16cefbd92df023e9af6cfbab8d328d0d 332 Gene3D G3DSA:3.40.50.1980 22 164 2.2E-22 T 28-03-2018 AM393_RS26360 16cefbd92df023e9af6cfbab8d328d0d 332 Gene3D G3DSA:3.40.50.1980 165 330 1.9E-34 T 28-03-2018 AM393_RS04915 2dba6540a8cc94e07e8f45d2430c3d32 434 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 414 424 - T 28-03-2018 IPR030391 RNA methyltransferase TrmA, conserved site AM393_RS04915 2dba6540a8cc94e07e8f45d2430c3d32 434 Hamap MF_01010 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [rlmD]. 18 432 65.569 T 28-03-2018 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 AM393_RS04915 2dba6540a8cc94e07e8f45d2430c3d32 434 SUPERFAMILY SSF53335 76 431 2.45E-90 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM393_RS04915 2dba6540a8cc94e07e8f45d2430c3d32 434 Pfam PF01938 TRAM domain 11 66 4.4E-10 T 28-03-2018 IPR002792 TRAM domain AM393_RS04915 2dba6540a8cc94e07e8f45d2430c3d32 434 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 363 393 - T 28-03-2018 IPR030390 RNA methyltransferase TrmA, active site AM393_RS04915 2dba6540a8cc94e07e8f45d2430c3d32 434 Gene3D G3DSA:3.40.50.150 88 431 2.3E-56 T 28-03-2018 AM393_RS04915 2dba6540a8cc94e07e8f45d2430c3d32 434 Gene3D G3DSA:2.40.50.140 1 87 4.2E-27 T 28-03-2018 AM393_RS04915 2dba6540a8cc94e07e8f45d2430c3d32 434 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 24 424 9.6E-151 T 28-03-2018 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 AM393_RS04915 2dba6540a8cc94e07e8f45d2430c3d32 434 SUPERFAMILY SSF50249 2 66 5.71E-14 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM393_RS04915 2dba6540a8cc94e07e8f45d2430c3d32 434 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 262 432 9.2E-26 T 28-03-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 AM393_RS03015 b160c537ad6bcbe4bad3c27fbcd920f5 553 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 6 176 1.3E-32 T 28-03-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 AM393_RS03015 b160c537ad6bcbe4bad3c27fbcd920f5 553 Gene3D G3DSA:3.40.50.970 353 544 1.0E-33 T 28-03-2018 AM393_RS03015 b160c537ad6bcbe4bad3c27fbcd920f5 553 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 394 528 3.6E-18 T 28-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AM393_RS03015 b160c537ad6bcbe4bad3c27fbcd920f5 553 PIRSF PIRSF036565 1 552 5.7E-209 T 28-03-2018 IPR012110 Thiamine pyrophosphate (TPP)-dependent enzyme GO:0016831 AM393_RS03015 b160c537ad6bcbe4bad3c27fbcd920f5 553 Gene3D G3DSA:3.40.50.1220 200 352 2.2E-25 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AM393_RS03015 b160c537ad6bcbe4bad3c27fbcd920f5 553 SUPERFAMILY SSF52518 5 176 1.47E-42 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold AM393_RS03015 b160c537ad6bcbe4bad3c27fbcd920f5 553 SUPERFAMILY SSF52518 358 544 2.03E-41 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold AM393_RS03015 b160c537ad6bcbe4bad3c27fbcd920f5 553 SUPERFAMILY SSF52467 167 337 2.21E-30 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AM393_RS03015 b160c537ad6bcbe4bad3c27fbcd920f5 553 Gene3D G3DSA:3.40.50.970 1 199 6.4E-46 T 28-03-2018 AM393_RS03015 b160c537ad6bcbe4bad3c27fbcd920f5 553 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 201 315 5.1E-19 T 28-03-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 AM393_RS03065 62102d8acdbc4a3e8a7ed3002bb43961 472 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 2 305 5.2E-121 T 28-03-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 AM393_RS03065 62102d8acdbc4a3e8a7ed3002bb43961 472 Gene3D G3DSA:3.40.50.620 119 230 1.7E-27 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM393_RS03065 62102d8acdbc4a3e8a7ed3002bb43961 472 Gene3D G3DSA:1.10.10.350 366 472 3.2E-24 T 28-03-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 AM393_RS03065 62102d8acdbc4a3e8a7ed3002bb43961 472 Gene3D G3DSA:1.10.8.70 317 360 3.9E-12 T 28-03-2018 IPR020752 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 1 GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 AM393_RS03065 62102d8acdbc4a3e8a7ed3002bb43961 472 Gene3D G3DSA:1.10.1160.10 232 314 2.2E-34 T 28-03-2018 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 AM393_RS03065 62102d8acdbc4a3e8a7ed3002bb43961 472 SUPERFAMILY SSF48163 299 461 1.7E-45 T 28-03-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 AM393_RS03065 62102d8acdbc4a3e8a7ed3002bb43961 472 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 2 463 1.3E-209 T 28-03-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 AM393_RS03065 62102d8acdbc4a3e8a7ed3002bb43961 472 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 2 461 32.88 T 28-03-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 AM393_RS03065 62102d8acdbc4a3e8a7ed3002bb43961 472 SUPERFAMILY SSF52374 3 298 4.29E-113 T 28-03-2018 AM393_RS03065 62102d8acdbc4a3e8a7ed3002bb43961 472 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 20 - T 28-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM393_RS03065 62102d8acdbc4a3e8a7ed3002bb43961 472 Gene3D G3DSA:3.40.50.620 3 118 4.8E-42 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM393_RS03065 62102d8acdbc4a3e8a7ed3002bb43961 472 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 6.0E-28 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AM393_RS03065 62102d8acdbc4a3e8a7ed3002bb43961 472 PRINTS PR00987 Glutamyl-tRNA synthetase signature 179 189 6.0E-28 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AM393_RS03065 62102d8acdbc4a3e8a7ed3002bb43961 472 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 6.0E-28 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AM393_RS03065 62102d8acdbc4a3e8a7ed3002bb43961 472 PRINTS PR00987 Glutamyl-tRNA synthetase signature 195 203 6.0E-28 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AM393_RS03065 62102d8acdbc4a3e8a7ed3002bb43961 472 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 6.0E-28 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AM393_RS23650 795e0f878b113b4b2db2ada91408aa0d 253 SUPERFAMILY SSF53335 19 240 1.99E-31 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM393_RS23650 795e0f878b113b4b2db2ada91408aa0d 253 Gene3D G3DSA:1.10.150.290 178 230 4.7E-26 T 28-03-2018 IPR023149 Trans-aconitate 2-methyltransferase, C-terminal GO:0030798 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 AM393_RS23650 795e0f878b113b4b2db2ada91408aa0d 253 Pfam PF13489 Methyltransferase domain 12 135 2.6E-12 T 28-03-2018 AM393_RS23650 795e0f878b113b4b2db2ada91408aa0d 253 Gene3D G3DSA:3.40.50.150 1 177 3.2E-27 T 28-03-2018 AM393_RS23650 795e0f878b113b4b2db2ada91408aa0d 253 Hamap MF_00560 Trans-aconitate 2-methyltransferase [tam]. 2 251 42.935 T 28-03-2018 IPR023506 Trans-aconitate 2-methyltransferase GO:0030798 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 AM393_RS19825 88950c406efda25e26a89ea884feb863 231 Gene3D G3DSA:1.20.1080.10 1 231 9.2E-71 T 28-03-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 AM393_RS19825 88950c406efda25e26a89ea884feb863 231 TIGRFAM TIGR00861 MIP: MIP family channel proteins 7 223 6.0E-63 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AM393_RS19825 88950c406efda25e26a89ea884feb863 231 Hamap MF_01146 Aquaporin Z [aqpZ]. 2 230 35.779 T 28-03-2018 IPR023743 Aquaporin Z GO:0006833|GO:0015250|GO:0016021|GO:0055085 AM393_RS19825 88950c406efda25e26a89ea884feb863 231 ProSitePatterns PS00221 MIP family signature. 61 69 - T 28-03-2018 IPR022357 Major intrinsic protein, conserved site GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AM393_RS19825 88950c406efda25e26a89ea884feb863 231 Pfam PF00230 Major intrinsic protein 2 223 1.4E-49 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AM393_RS19825 88950c406efda25e26a89ea884feb863 231 SUPERFAMILY SSF81338 2 228 2.62E-67 T 28-03-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 AM393_RS19825 88950c406efda25e26a89ea884feb863 231 PRINTS PR00783 Major intrinsic protein family signature 167 189 2.1E-50 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AM393_RS19825 88950c406efda25e26a89ea884feb863 231 PRINTS PR00783 Major intrinsic protein family signature 43 67 2.1E-50 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AM393_RS19825 88950c406efda25e26a89ea884feb863 231 PRINTS PR00783 Major intrinsic protein family signature 80 99 2.1E-50 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AM393_RS19825 88950c406efda25e26a89ea884feb863 231 PRINTS PR00783 Major intrinsic protein family signature 137 155 2.1E-50 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AM393_RS19825 88950c406efda25e26a89ea884feb863 231 PRINTS PR00783 Major intrinsic protein family signature 206 226 2.1E-50 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AM393_RS19825 88950c406efda25e26a89ea884feb863 231 PRINTS PR00783 Major intrinsic protein family signature 3 22 2.1E-50 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AM393_RS04640 af9a578fda01313291068917557e6924 104 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 3 94 4.6E-20 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AM393_RS04640 af9a578fda01313291068917557e6924 104 Gene3D G3DSA:3.40.50.2300 2 104 2.2E-35 T 28-03-2018 AM393_RS04640 af9a578fda01313291068917557e6924 104 SUPERFAMILY SSF52794 1 103 4.19E-35 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AM393_RS06480 15e446db7bb8d48349e54bc79c5897a5 87 Gene3D G3DSA:3.30.70.1530 36 76 5.3E-4 T 28-03-2018 AM393_RS18660 6522c5a33a4151268ab5a44decab9ead 115 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 10 113 2.0E-36 T 28-03-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 AM393_RS18660 6522c5a33a4151268ab5a44decab9ead 115 Gene3D G3DSA:1.20.1300.10 1 115 6.8E-18 T 28-03-2018 AM393_RS18660 6522c5a33a4151268ab5a44decab9ead 115 PIRSF PIRSF000169 1 115 2.0E-41 T 28-03-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 AM393_RS18660 6522c5a33a4151268ab5a44decab9ead 115 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 11 104 6.8E-6 T 28-03-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM393_RS18660 6522c5a33a4151268ab5a44decab9ead 115 SUPERFAMILY SSF81343 5 115 3.92E-30 T 28-03-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM393_RS04425 848c063697749d72d50667deef1af240 287 Pfam PF00950 ABC 3 transport family 13 272 3.1E-51 T 28-03-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 AM393_RS04425 848c063697749d72d50667deef1af240 287 Gene3D G3DSA:1.10.3470.10 10 280 6.3E-19 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AM393_RS04425 848c063697749d72d50667deef1af240 287 SUPERFAMILY SSF81345 5 270 1.57E-19 T 28-03-2018 IPR029022 ABC transporter, BtuC-like AM393_RS17515 ef7f0ea9370755e01a5b52740c97fd3d 317 SUPERFAMILY SSF51430 1 315 3.14E-92 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM393_RS17515 ef7f0ea9370755e01a5b52740c97fd3d 317 Gene3D G3DSA:3.20.20.100 1 317 3.2E-86 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM393_RS17515 ef7f0ea9370755e01a5b52740c97fd3d 317 Pfam PF00248 Aldo/keto reductase family 15 315 8.6E-73 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM393_RS14210 df9f8d30728f8071b2400066ceb034e4 425 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 81 8.1E-23 T 28-03-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 AM393_RS14210 df9f8d30728f8071b2400066ceb034e4 425 Pfam PF07670 Nucleoside recognition 99 195 5.0E-8 T 28-03-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 AM393_RS14210 df9f8d30728f8071b2400066ceb034e4 425 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 4 422 3.6E-152 T 28-03-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 AM393_RS14210 df9f8d30728f8071b2400066ceb034e4 425 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 201 422 4.3E-77 T 28-03-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 AM393_RS16280 662df771abaf2d3576261d6e1f750d4a 231 SUPERFAMILY SSF46785 5 62 3.33E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS16280 662df771abaf2d3576261d6e1f750d4a 231 Pfam PF08279 HTH domain 7 60 7.1E-17 T 28-03-2018 IPR013196 Helix-turn-helix, type 11 AM393_RS16280 662df771abaf2d3576261d6e1f750d4a 231 Gene3D G3DSA:1.10.10.10 2 64 1.3E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS16280 662df771abaf2d3576261d6e1f750d4a 231 Pfam PF13280 WYL domain 137 223 5.1E-19 T 28-03-2018 IPR026881 WYL domain AM393_RS26350 077e50c82fe41d3ba021346fccad94ec 331 Gene3D G3DSA:3.40.50.720 1 316 4.2E-28 T 28-03-2018 AM393_RS26350 077e50c82fe41d3ba021346fccad94ec 331 Pfam PF13460 NAD(P)H-binding 11 102 1.2E-11 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS26350 077e50c82fe41d3ba021346fccad94ec 331 SUPERFAMILY SSF51735 6 315 1.18E-39 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS05010 d5b6c4f991b4b24eab3b6ec43c473d61 232 Gene3D G3DSA:1.10.3720.10 14 227 9.3E-25 T 28-03-2018 AM393_RS05010 d5b6c4f991b4b24eab3b6ec43c473d61 232 SUPERFAMILY SSF161098 17 216 1.57E-30 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS05010 d5b6c4f991b4b24eab3b6ec43c473d61 232 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 56 225 9.2E-15 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS03520 99cff9f07bc9340c1da86dc66885f26a 492 Pfam PF01926 50S ribosome-binding GTPase 207 324 2.0E-24 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 AM393_RS03520 99cff9f07bc9340c1da86dc66885f26a 492 Pfam PF01926 50S ribosome-binding GTPase 5 119 4.6E-28 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 AM393_RS03520 99cff9f07bc9340c1da86dc66885f26a 492 Gene3D G3DSA:1.20.120.430 68 270 2.1E-46 T 28-03-2018 AM393_RS03520 99cff9f07bc9340c1da86dc66885f26a 492 Gene3D G3DSA:1.20.120.430 271 383 8.2E-18 T 28-03-2018 AM393_RS03520 99cff9f07bc9340c1da86dc66885f26a 492 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 154 8.3E-21 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AM393_RS03520 99cff9f07bc9340c1da86dc66885f26a 492 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 204 370 3.3E-22 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AM393_RS03520 99cff9f07bc9340c1da86dc66885f26a 492 Gene3D G3DSA:3.30.300.20 384 461 2.1E-28 T 28-03-2018 IPR015946 K homology domain-like, alpha/beta AM393_RS03520 99cff9f07bc9340c1da86dc66885f26a 492 SUPERFAMILY SSF52540 137 167 2.68E-60 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS03520 99cff9f07bc9340c1da86dc66885f26a 492 SUPERFAMILY SSF52540 202 466 2.68E-60 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS03520 99cff9f07bc9340c1da86dc66885f26a 492 Gene3D G3DSA:1.20.120.430 2 67 5.1E-15 T 28-03-2018 AM393_RS03520 99cff9f07bc9340c1da86dc66885f26a 492 PIRSF PIRSF006485 1 468 1.7E-180 T 28-03-2018 IPR016484 GTP-binding protein EngA GO:0005525 AM393_RS03520 99cff9f07bc9340c1da86dc66885f26a 492 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 380 460 8.8E-27 T 28-03-2018 IPR032859 GTPase Der, C-terminal KH-domain-like AM393_RS03520 99cff9f07bc9340c1da86dc66885f26a 492 Hamap MF_00195 GTPase Der [der]. 2 463 39.385 T 28-03-2018 IPR016484 GTP-binding protein EngA GO:0005525 AM393_RS03520 99cff9f07bc9340c1da86dc66885f26a 492 SUPERFAMILY SSF52540 4 162 1.04E-45 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS03520 99cff9f07bc9340c1da86dc66885f26a 492 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 9.2E-10 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 AM393_RS03520 99cff9f07bc9340c1da86dc66885f26a 492 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 72 90 9.2E-10 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 AM393_RS03520 99cff9f07bc9340c1da86dc66885f26a 492 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 460 1.8E-179 T 28-03-2018 IPR016484 GTP-binding protein EngA GO:0005525 AM393_RS02895 7e9e92cf094af71de5b6e8c9a6544014 269 Pfam PF01925 Sulfite exporter TauE/SafE 18 253 5.0E-43 T 28-03-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 AM393_RS22565 4fc57ff8c4223ec2cd816bef5b532ed3 70 Pfam PF13619 KTSC domain 7 64 7.6E-17 T 28-03-2018 IPR025309 KTSC domain AM393_RS09945 adf5b45ed16f740b68bbe56e6df0fc60 317 Gene3D G3DSA:1.10.10.60 263 317 4.5E-13 T 28-03-2018 AM393_RS09945 adf5b45ed16f740b68bbe56e6df0fc60 317 Gene3D G3DSA:1.10.10.60 210 262 6.1E-14 T 28-03-2018 AM393_RS09945 adf5b45ed16f740b68bbe56e6df0fc60 317 Pfam PF12833 Helix-turn-helix domain 233 311 2.0E-20 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM393_RS09945 adf5b45ed16f740b68bbe56e6df0fc60 317 Gene3D G3DSA:3.40.50.880 2 209 3.6E-49 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AM393_RS09945 adf5b45ed16f740b68bbe56e6df0fc60 317 SUPERFAMILY SSF52317 5 192 1.26E-41 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AM393_RS09945 adf5b45ed16f740b68bbe56e6df0fc60 317 Pfam PF01965 DJ-1/PfpI family 63 171 9.7E-9 T 28-03-2018 IPR002818 DJ-1/PfpI AM393_RS09945 adf5b45ed16f740b68bbe56e6df0fc60 317 SMART SM00342 227 310 3.2E-24 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM393_RS09945 adf5b45ed16f740b68bbe56e6df0fc60 317 SUPERFAMILY SSF46689 264 314 1.4E-9 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS09945 adf5b45ed16f740b68bbe56e6df0fc60 317 SUPERFAMILY SSF46689 210 261 1.79E-10 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS26590 fcef4d0d3d38a3202038e42855f923e5 109 Gene3D G3DSA:3.10.450.140 10 108 3.3E-44 T 28-03-2018 IPR007376 dsDNA mimic, putative AM393_RS26590 fcef4d0d3d38a3202038e42855f923e5 109 SUPERFAMILY SSF102816 3 109 1.31E-49 T 28-03-2018 IPR007376 dsDNA mimic, putative AM393_RS26590 fcef4d0d3d38a3202038e42855f923e5 109 Pfam PF04269 Protein of unknown function, DUF440 8 109 2.9E-45 T 28-03-2018 IPR007376 dsDNA mimic, putative AM393_RS26590 fcef4d0d3d38a3202038e42855f923e5 109 ProDom PD020447 UPF0263 YCIU HD0986 VV1228 UNCHARACTERIZED 3D-STRUCTURE VV13059 BCR PM0536 VC1208 7 109 5.0E-51 T 28-03-2018 IPR007376 dsDNA mimic, putative AM393_RS26590 fcef4d0d3d38a3202038e42855f923e5 109 Hamap MF_00680 UPF0263 protein YciU [yciU]. 5 109 34.003 T 28-03-2018 IPR007376 dsDNA mimic, putative AM393_RS26590 fcef4d0d3d38a3202038e42855f923e5 109 PIRSF PIRSF004916 1 109 5.0E-55 T 28-03-2018 IPR007376 dsDNA mimic, putative AM393_RS21060 e4d8be3ff5ae8450441cf7cd645f1d18 228 Gene3D G3DSA:3.20.20.450 2 222 7.3E-21 T 28-03-2018 IPR001633 EAL domain AM393_RS21060 e4d8be3ff5ae8450441cf7cd645f1d18 228 Pfam PF00563 EAL domain 46 220 6.5E-18 T 28-03-2018 IPR001633 EAL domain AM393_RS21060 e4d8be3ff5ae8450441cf7cd645f1d18 228 SMART SM00052 2 222 0.0032 T 28-03-2018 IPR001633 EAL domain AM393_RS21060 e4d8be3ff5ae8450441cf7cd645f1d18 228 SUPERFAMILY SSF141868 7 219 7.72E-21 T 28-03-2018 IPR001633 EAL domain AM393_RS25685 025a32a95ef1e314da77ff5ee4372ca5 315 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 119 311 1.2E-26 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS25685 025a32a95ef1e314da77ff5ee4372ca5 315 SUPERFAMILY SSF161098 96 295 2.22E-20 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS25685 025a32a95ef1e314da77ff5ee4372ca5 315 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 26 78 1.2E-13 T 28-03-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain AM393_RS25685 025a32a95ef1e314da77ff5ee4372ca5 315 Gene3D G3DSA:1.10.3720.10 28 300 5.5E-44 T 28-03-2018 AM393_RS14870 6e6e3bbf9a2063a16ffd353d4af660b5 420 SMART SM00842 10 196 1.9E-96 T 28-03-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 AM393_RS14870 6e6e3bbf9a2063a16ffd353d4af660b5 420 Gene3D G3DSA:3.30.420.40 2 186 7.6E-35 T 28-03-2018 AM393_RS14870 6e6e3bbf9a2063a16ffd353d4af660b5 420 Pfam PF14450 Cell division protein FtsA 207 381 8.9E-25 T 28-03-2018 AM393_RS14870 6e6e3bbf9a2063a16ffd353d4af660b5 420 Hamap MF_02033 Cell division protein FtsA [ftsA]. 6 420 29.522 T 28-03-2018 IPR020823 Cell division protein FtsA GO:0007049 AM393_RS14870 6e6e3bbf9a2063a16ffd353d4af660b5 420 SUPERFAMILY SSF53067 8 221 5.18E-61 T 28-03-2018 AM393_RS14870 6e6e3bbf9a2063a16ffd353d4af660b5 420 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 9 385 1.3E-161 T 28-03-2018 IPR020823 Cell division protein FtsA GO:0007049 AM393_RS14870 6e6e3bbf9a2063a16ffd353d4af660b5 420 Pfam PF02491 SHS2 domain inserted in FTSA 85 162 7.9E-30 T 28-03-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 AM393_RS14870 6e6e3bbf9a2063a16ffd353d4af660b5 420 PIRSF PIRSF003101 2 420 6.2E-153 T 28-03-2018 IPR020823 Cell division protein FtsA GO:0007049 AM393_RS14870 6e6e3bbf9a2063a16ffd353d4af660b5 420 SUPERFAMILY SSF53067 198 384 1.84E-47 T 28-03-2018 AM393_RS14870 6e6e3bbf9a2063a16ffd353d4af660b5 420 Gene3D G3DSA:3.30.420.40 197 247 1.8E-6 T 28-03-2018 AM393_RS14870 6e6e3bbf9a2063a16ffd353d4af660b5 420 Gene3D G3DSA:3.90.640.10 248 300 2.6E-19 T 28-03-2018 AM393_RS04310 57fbf88c4454385234303d74f040dcaf 111 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 5 104 1.8E-14 T 28-03-2018 IPR008407 Branched-chain amino acid transport, AzlD AM393_RS22915 0a2838737e99aa4f056732142c5edeb8 239 Pfam PF00072 Response regulator receiver domain 4 112 2.5E-20 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM393_RS22915 0a2838737e99aa4f056732142c5edeb8 239 SMART SM00862 156 232 3.7E-19 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM393_RS22915 0a2838737e99aa4f056732142c5edeb8 239 Gene3D G3DSA:3.40.50.2300 2 127 2.0E-25 T 28-03-2018 AM393_RS22915 0a2838737e99aa4f056732142c5edeb8 239 Gene3D G3DSA:1.10.10.10 128 239 3.1E-29 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS22915 0a2838737e99aa4f056732142c5edeb8 239 SMART SM00448 2 112 9.1E-30 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM393_RS22915 0a2838737e99aa4f056732142c5edeb8 239 Pfam PF00486 Transcriptional regulatory protein, C terminal 156 232 6.7E-21 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM393_RS22915 0a2838737e99aa4f056732142c5edeb8 239 SUPERFAMILY SSF52172 2 188 2.21E-29 T 28-03-2018 IPR011006 CheY-like superfamily AM393_RS04320 dc6346f31702c3a9bab50eadc2840926 390 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 169 289 1.8E-10 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AM393_RS04320 dc6346f31702c3a9bab50eadc2840926 390 SUPERFAMILY SSF111369 194 270 8.11E-8 T 28-03-2018 AM393_RS04320 dc6346f31702c3a9bab50eadc2840926 390 SUPERFAMILY SSF111369 56 113 1.31E-5 T 28-03-2018 AM393_RS04320 dc6346f31702c3a9bab50eadc2840926 390 TIGRFAM TIGR00998 8a0101: efflux pump membrane protein 20 345 1.9E-139 T 28-03-2018 IPR005694 Efflux pump membrane protein Emr GO:0006855|GO:0015238 AM393_RS04320 dc6346f31702c3a9bab50eadc2840926 390 Gene3D G3DSA:2.40.50.100 60 138 3.4E-12 T 28-03-2018 AM393_RS04320 dc6346f31702c3a9bab50eadc2840926 390 Pfam PF00529 HlyD membrane-fusion protein of T1SS 36 345 4.6E-16 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AM393_RS04320 dc6346f31702c3a9bab50eadc2840926 390 Gene3D G3DSA:1.10.287.470 139 186 5.0E-6 T 28-03-2018 AM393_RS04320 dc6346f31702c3a9bab50eadc2840926 390 Gene3D G3DSA:2.40.50.100 208 358 1.1E-5 T 28-03-2018 AM393_RS02710 2fd9fba7ff907448bdaa5886ec5e1519 308 Gene3D G3DSA:1.10.10.10 9 93 4.2E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS02710 2fd9fba7ff907448bdaa5886ec5e1519 308 SUPERFAMILY SSF46785 10 88 2.47E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS02710 2fd9fba7ff907448bdaa5886ec5e1519 308 Gene3D G3DSA:3.40.190.10 94 182 1.1E-13 T 28-03-2018 AM393_RS02710 2fd9fba7ff907448bdaa5886ec5e1519 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 49 60 2.4E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS02710 2fd9fba7ff907448bdaa5886ec5e1519 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 49 2.4E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS02710 2fd9fba7ff907448bdaa5886ec5e1519 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 28 39 2.4E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS02710 2fd9fba7ff907448bdaa5886ec5e1519 308 Gene3D G3DSA:3.40.190.10 183 262 2.4E-15 T 28-03-2018 AM393_RS02710 2fd9fba7ff907448bdaa5886ec5e1519 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 71 8.1E-18 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS02710 2fd9fba7ff907448bdaa5886ec5e1519 308 Pfam PF03466 LysR substrate binding domain 96 284 9.4E-28 T 28-03-2018 IPR005119 LysR, substrate-binding AM393_RS02710 2fd9fba7ff907448bdaa5886ec5e1519 308 SUPERFAMILY SSF53850 97 291 2.53E-27 T 28-03-2018 AM393_RS01965 2fc54ded13835f883f8cb9c9f1977b07 350 SUPERFAMILY SSF51569 57 242 9.52E-65 T 28-03-2018 AM393_RS01965 2fc54ded13835f883f8cb9c9f1977b07 350 SUPERFAMILY SSF51569 270 344 9.52E-65 T 28-03-2018 AM393_RS01965 2fc54ded13835f883f8cb9c9f1977b07 350 SMART SM01133 68 326 4.9E-41 T 28-03-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 AM393_RS01965 2fc54ded13835f883f8cb9c9f1977b07 350 Pfam PF01791 DeoC/LacD family aldolase 69 326 6.6E-74 T 28-03-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 AM393_RS01965 2fc54ded13835f883f8cb9c9f1977b07 350 Gene3D G3DSA:3.20.20.70 52 344 3.9E-66 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM393_RS01060 4313f370e01289eb354b8c166b3aeab8 416 Gene3D G3DSA:2.130.10.10 250 406 4.2E-9 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 AM393_RS01060 4313f370e01289eb354b8c166b3aeab8 416 Gene3D G3DSA:2.130.10.10 19 237 0.032 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 AM393_RS01060 4313f370e01289eb354b8c166b3aeab8 416 SUPERFAMILY SSF50974 162 207 2.88E-9 T 28-03-2018 IPR011045 Nitrous oxide reductase, N-terminal Reactome: R-HSA-114608 AM393_RS01060 4313f370e01289eb354b8c166b3aeab8 416 SUPERFAMILY SSF50974 249 393 2.88E-9 T 28-03-2018 IPR011045 Nitrous oxide reductase, N-terminal Reactome: R-HSA-114608 AM393_RS01060 4313f370e01289eb354b8c166b3aeab8 416 SUPERFAMILY SSF50974 8 99 2.88E-9 T 28-03-2018 IPR011045 Nitrous oxide reductase, N-terminal Reactome: R-HSA-114608 AM393_RS04420 7bbe3828328742f8444f5f3dfbde176d 292 Gene3D G3DSA:3.40.50.1980 15 172 7.8E-45 T 28-03-2018 AM393_RS04420 7bbe3828328742f8444f5f3dfbde176d 292 SUPERFAMILY SSF53807 20 292 1.18E-81 T 28-03-2018 AM393_RS04420 7bbe3828328742f8444f5f3dfbde176d 292 PRINTS PR00691 Adhesin B signature 227 244 3.9E-22 T 28-03-2018 IPR006129 Adhesin B GO:0007155 AM393_RS04420 7bbe3828328742f8444f5f3dfbde176d 292 PRINTS PR00691 Adhesin B signature 270 288 3.9E-22 T 28-03-2018 IPR006129 Adhesin B GO:0007155 AM393_RS04420 7bbe3828328742f8444f5f3dfbde176d 292 PRINTS PR00691 Adhesin B signature 48 66 3.9E-22 T 28-03-2018 IPR006129 Adhesin B GO:0007155 AM393_RS04420 7bbe3828328742f8444f5f3dfbde176d 292 PRINTS PR00691 Adhesin B signature 67 86 3.9E-22 T 28-03-2018 IPR006129 Adhesin B GO:0007155 AM393_RS04420 7bbe3828328742f8444f5f3dfbde176d 292 PRINTS PR00691 Adhesin B signature 178 195 3.9E-22 T 28-03-2018 IPR006129 Adhesin B GO:0007155 AM393_RS04420 7bbe3828328742f8444f5f3dfbde176d 292 PRINTS PR00691 Adhesin B signature 23 44 3.9E-22 T 28-03-2018 IPR006129 Adhesin B GO:0007155 AM393_RS04420 7bbe3828328742f8444f5f3dfbde176d 292 Gene3D G3DSA:3.40.50.1980 173 292 5.8E-37 T 28-03-2018 AM393_RS04420 7bbe3828328742f8444f5f3dfbde176d 292 Pfam PF01297 Zinc-uptake complex component A periplasmic 26 289 2.5E-76 T 28-03-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 AM393_RS04420 7bbe3828328742f8444f5f3dfbde176d 292 PRINTS PR00690 Adhesin family signature 23 41 7.2E-27 T 28-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 AM393_RS04420 7bbe3828328742f8444f5f3dfbde176d 292 PRINTS PR00690 Adhesin family signature 231 249 7.2E-27 T 28-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 AM393_RS04420 7bbe3828328742f8444f5f3dfbde176d 292 PRINTS PR00690 Adhesin family signature 54 67 7.2E-27 T 28-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 AM393_RS04420 7bbe3828328742f8444f5f3dfbde176d 292 PRINTS PR00690 Adhesin family signature 178 199 7.2E-27 T 28-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 AM393_RS04420 7bbe3828328742f8444f5f3dfbde176d 292 PRINTS PR00690 Adhesin family signature 67 84 7.2E-27 T 28-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 AM393_RS04420 7bbe3828328742f8444f5f3dfbde176d 292 PRINTS PR00690 Adhesin family signature 257 276 7.2E-27 T 28-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 AM393_RS26465 13b72cfda06580c4fe411a04d349e063 183 PRINTS PR01011 Glutathione peroxidase family signature 23 40 9.2E-20 T 28-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AM393_RS26465 13b72cfda06580c4fe411a04d349e063 183 PRINTS PR01011 Glutathione peroxidase family signature 58 74 9.2E-20 T 28-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AM393_RS26465 13b72cfda06580c4fe411a04d349e063 183 PRINTS PR01011 Glutathione peroxidase family signature 143 152 9.2E-20 T 28-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AM393_RS26465 13b72cfda06580c4fe411a04d349e063 183 Pfam PF00255 Glutathione peroxidase 6 111 1.9E-44 T 28-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AM393_RS26465 13b72cfda06580c4fe411a04d349e063 183 Hamap MF_02061 Thioredoxin/glutathione peroxidase BtuE [btuE]. 3 183 49.829 T 28-03-2018 IPR033674 Thioredoxin/glutathione peroxidase BtuE KEGG: 00480+1.11.1.15+1.11.1.9|KEGG: 00590+1.11.1.9|MetaCyc: PWY-4081 AM393_RS26465 13b72cfda06580c4fe411a04d349e063 183 SUPERFAMILY SSF52833 5 182 4.01E-57 T 28-03-2018 IPR012336 Thioredoxin-like fold AM393_RS26465 13b72cfda06580c4fe411a04d349e063 183 ProSitePatterns PS00460 Glutathione peroxidases active site. 25 40 - T 28-03-2018 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 AM393_RS26465 13b72cfda06580c4fe411a04d349e063 183 PIRSF PIRSF000303 1 183 7.1E-65 T 28-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AM393_RS26465 13b72cfda06580c4fe411a04d349e063 183 Gene3D G3DSA:3.40.30.10 3 183 9.2E-49 T 28-03-2018 AM393_RS26465 13b72cfda06580c4fe411a04d349e063 183 ProSitePatterns PS00763 Glutathione peroxidases signature 2. 61 68 - T 28-03-2018 IPR029760 Glutathione peroxidase conserved site Reactome: R-HSA-3299685 AM393_RS00695 389a051ca7f0cfcbc0405cb20351a1af 173 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 2 153 46.562 T 28-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AM393_RS00695 389a051ca7f0cfcbc0405cb20351a1af 173 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 4 157 3.3E-86 T 28-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AM393_RS00695 389a051ca7f0cfcbc0405cb20351a1af 173 Gene3D G3DSA:3.30.420.10 2 159 2.8E-51 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM393_RS00695 389a051ca7f0cfcbc0405cb20351a1af 173 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 4 150 2.8E-68 T 28-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AM393_RS00695 389a051ca7f0cfcbc0405cb20351a1af 173 SUPERFAMILY SSF53098 3 156 9.86E-56 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM393_RS00695 389a051ca7f0cfcbc0405cb20351a1af 173 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 113 147 - T 28-03-2018 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 AM393_RS00695 389a051ca7f0cfcbc0405cb20351a1af 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 5 18 3.0E-44 T 28-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AM393_RS00695 389a051ca7f0cfcbc0405cb20351a1af 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 61 77 3.0E-44 T 28-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AM393_RS00695 389a051ca7f0cfcbc0405cb20351a1af 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 107 126 3.0E-44 T 28-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AM393_RS00695 389a051ca7f0cfcbc0405cb20351a1af 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 138 150 3.0E-44 T 28-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AM393_RS00695 389a051ca7f0cfcbc0405cb20351a1af 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 83 99 3.0E-44 T 28-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AM393_RS10745 86dcdeb3d55e92825e57e10e162faa49 329 TIGRFAM TIGR02447 yiiD_Cterm: putative thioesterase domain 181 314 1.9E-48 T 28-03-2018 IPR012660 Thioesterase, putative AM393_RS10745 86dcdeb3d55e92825e57e10e162faa49 329 Pfam PF00583 Acetyltransferase (GNAT) family 44 138 1.5E-13 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AM393_RS10745 86dcdeb3d55e92825e57e10e162faa49 329 SUPERFAMILY SSF55729 15 162 1.61E-29 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM393_RS10745 86dcdeb3d55e92825e57e10e162faa49 329 SUPERFAMILY SSF54637 171 313 3.19E-39 T 28-03-2018 IPR029069 HotDog domain AM393_RS10745 86dcdeb3d55e92825e57e10e162faa49 329 Pfam PF09500 Putative thioesterase (yiiD_Cterm) 174 313 9.6E-49 T 28-03-2018 IPR012660 Thioesterase, putative AM393_RS10745 86dcdeb3d55e92825e57e10e162faa49 329 Gene3D G3DSA:3.40.630.30 15 161 3.0E-23 T 28-03-2018 AM393_RS10745 86dcdeb3d55e92825e57e10e162faa49 329 Gene3D G3DSA:3.10.129.10 162 316 1.6E-18 T 28-03-2018 AM393_RS13720 239875d9cfce5a33f244976d53aa0a7e 914 SUPERFAMILY SSF52540 269 498 1.27E-59 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS13720 239875d9cfce5a33f244976d53aa0a7e 914 Pfam PF00005 ABC transporter 293 436 1.4E-25 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS13720 239875d9cfce5a33f244976d53aa0a7e 914 Pfam PF00005 ABC transporter 28 175 1.4E-25 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS13720 239875d9cfce5a33f244976d53aa0a7e 914 SMART SM00382 301 486 1.4E-8 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS13720 239875d9cfce5a33f244976d53aa0a7e 914 SMART SM00382 37 254 1.8E-5 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS13720 239875d9cfce5a33f244976d53aa0a7e 914 Gene3D G3DSA:3.40.50.300 14 274 1.2E-55 T 28-03-2018 AM393_RS13720 239875d9cfce5a33f244976d53aa0a7e 914 Gene3D G3DSA:3.40.50.300 275 551 6.3E-62 T 28-03-2018 AM393_RS13720 239875d9cfce5a33f244976d53aa0a7e 914 SUPERFAMILY SSF52540 15 239 2.05E-53 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS13720 239875d9cfce5a33f244976d53aa0a7e 914 Gene3D G3DSA:3.40.1710.10 580 733 1.3E-23 T 28-03-2018 AM393_RS13720 239875d9cfce5a33f244976d53aa0a7e 914 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS13720 239875d9cfce5a33f244976d53aa0a7e 914 Pfam PF12698 ABC-2 family transporter protein 571 906 8.3E-40 T 28-03-2018 AM393_RS08650 b3be6876b5e9b6d7425220f6e834d1f2 79 Pfam PF09012 FeoC like transcriptional regulator 3 69 3.6E-17 T 28-03-2018 IPR015102 Transcriptional regulator HTH-type, FeoC AM393_RS08650 b3be6876b5e9b6d7425220f6e834d1f2 79 Gene3D G3DSA:1.10.10.10 1 77 5.4E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS08650 b3be6876b5e9b6d7425220f6e834d1f2 79 Hamap MF_01586 Probable [Fe-S]-dependent transcriptional repressor [feoC]. 1 79 24.47 T 28-03-2018 IPR023732 Probable [Fe-S]-dependent transcriptional repressor AM393_RS08650 b3be6876b5e9b6d7425220f6e834d1f2 79 SUPERFAMILY SSF46785 2 77 3.23E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS18950 7fd791031ae712cf831da2beed1a5a55 318 PRINTS PR00116 Arginase signature 126 141 8.5E-7 T 28-03-2018 IPR006035 Ureohydrolase GO:0046872 AM393_RS18950 7fd791031ae712cf831da2beed1a5a55 318 PRINTS PR00116 Arginase signature 241 270 8.5E-7 T 28-03-2018 IPR006035 Ureohydrolase GO:0046872 AM393_RS18950 7fd791031ae712cf831da2beed1a5a55 318 PRINTS PR00116 Arginase signature 276 290 8.5E-7 T 28-03-2018 IPR006035 Ureohydrolase GO:0046872 AM393_RS18950 7fd791031ae712cf831da2beed1a5a55 318 PIRSF PIRSF036979 23 317 2.1E-24 T 28-03-2018 IPR006035 Ureohydrolase GO:0046872 AM393_RS18950 7fd791031ae712cf831da2beed1a5a55 318 SUPERFAMILY SSF52768 11 317 1.62E-76 T 28-03-2018 AM393_RS18950 7fd791031ae712cf831da2beed1a5a55 318 Pfam PF00491 Arginase family 45 313 1.3E-53 T 28-03-2018 IPR006035 Ureohydrolase GO:0046872 AM393_RS18950 7fd791031ae712cf831da2beed1a5a55 318 Gene3D G3DSA:3.40.800.10 2 318 5.1E-74 T 28-03-2018 AM393_RS18950 7fd791031ae712cf831da2beed1a5a55 318 TIGRFAM TIGR01227 hutG: formimidoylglutamase 12 314 7.4E-84 T 28-03-2018 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8 AM393_RS18950 7fd791031ae712cf831da2beed1a5a55 318 ProSitePatterns PS01053 Arginase family signature. 244 265 - T 28-03-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 AM393_RS18950 7fd791031ae712cf831da2beed1a5a55 318 Hamap MF_00737 Formimidoylglutamase [hutG]. 7 315 40.743 T 28-03-2018 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8 AM393_RS17325 188e6117ace704007fe8491874a71d24 231 Gene3D G3DSA:2.60.40.10 21 140 3.1E-39 T 28-03-2018 IPR013783 Immunoglobulin-like fold AM393_RS17325 188e6117ace704007fe8491874a71d24 231 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 21 142 3.4E-44 T 28-03-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 AM393_RS17325 188e6117ace704007fe8491874a71d24 231 SUPERFAMILY SSF49354 16 142 1.41E-43 T 28-03-2018 IPR008962 PapD-like AM393_RS17325 188e6117ace704007fe8491874a71d24 231 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 166 225 1.2E-11 T 28-03-2018 IPR016148 Pili assembly chaperone, C-terminal AM393_RS17325 188e6117ace704007fe8491874a71d24 231 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 97 114 - T 28-03-2018 IPR018046 Pili assembly chaperone, conserved site AM393_RS17325 188e6117ace704007fe8491874a71d24 231 SUPERFAMILY SSF49584 136 227 1.1E-15 T 28-03-2018 IPR016148 Pili assembly chaperone, C-terminal AM393_RS17325 188e6117ace704007fe8491874a71d24 231 Gene3D G3DSA:2.60.40.10 146 231 3.9E-18 T 28-03-2018 IPR013783 Immunoglobulin-like fold AM393_RS17325 188e6117ace704007fe8491874a71d24 231 PRINTS PR00969 Pili chaperone signature 21 30 5.3E-32 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM393_RS17325 188e6117ace704007fe8491874a71d24 231 PRINTS PR00969 Pili chaperone signature 98 115 5.3E-32 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM393_RS17325 188e6117ace704007fe8491874a71d24 231 PRINTS PR00969 Pili chaperone signature 124 139 5.3E-32 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM393_RS17325 188e6117ace704007fe8491874a71d24 231 PRINTS PR00969 Pili chaperone signature 161 176 5.3E-32 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM393_RS17325 188e6117ace704007fe8491874a71d24 231 PRINTS PR00969 Pili chaperone signature 70 91 5.3E-32 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM393_RS14320 96b7e20e9fabc104071e57da3071393c 238 SUPERFAMILY SSF52172 2 126 1.99E-36 T 28-03-2018 IPR011006 CheY-like superfamily AM393_RS14320 96b7e20e9fabc104071e57da3071393c 238 Gene3D G3DSA:1.10.10.10 130 238 1.8E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS14320 96b7e20e9fabc104071e57da3071393c 238 SMART SM00862 156 232 3.7E-15 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM393_RS14320 96b7e20e9fabc104071e57da3071393c 238 Gene3D G3DSA:3.40.50.2300 1 129 7.4E-32 T 28-03-2018 AM393_RS14320 96b7e20e9fabc104071e57da3071393c 238 SMART SM00448 4 114 4.1E-38 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM393_RS14320 96b7e20e9fabc104071e57da3071393c 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 156 232 2.5E-18 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM393_RS14320 96b7e20e9fabc104071e57da3071393c 238 Pfam PF00072 Response regulator receiver domain 6 113 4.3E-27 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM393_RS14320 96b7e20e9fabc104071e57da3071393c 238 SUPERFAMILY SSF46894 136 234 6.24E-22 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM393_RS16545 cf694437af3ddb7049c669fc92e59b16 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 28-03-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 AM393_RS16545 cf694437af3ddb7049c669fc92e59b16 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 28-03-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 AM393_RS16545 cf694437af3ddb7049c669fc92e59b16 112 SUPERFAMILY SSF54913 1 112 4.13E-42 T 28-03-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta AM393_RS16545 cf694437af3ddb7049c669fc92e59b16 112 PIRSF PIRSF039144 1 112 9.8E-53 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AM393_RS16545 cf694437af3ddb7049c669fc92e59b16 112 SMART SM00938 4 105 5.0E-61 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AM393_RS16545 cf694437af3ddb7049c669fc92e59b16 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 1.9E-41 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AM393_RS16545 cf694437af3ddb7049c669fc92e59b16 112 PRINTS PR00340 P-II protein signature 83 103 4.1E-41 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AM393_RS16545 cf694437af3ddb7049c669fc92e59b16 112 PRINTS PR00340 P-II protein signature 2 17 4.1E-41 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AM393_RS16545 cf694437af3ddb7049c669fc92e59b16 112 PRINTS PR00340 P-II protein signature 52 75 4.1E-41 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AM393_RS16545 cf694437af3ddb7049c669fc92e59b16 112 PRINTS PR00340 P-II protein signature 23 41 4.1E-41 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AM393_RS16545 cf694437af3ddb7049c669fc92e59b16 112 Gene3D G3DSA:3.30.70.120 1 108 1.1E-45 T 28-03-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal AM393_RS02000 f1f015042486feaa309d44f005093c39 299 Pfam PF03466 LysR substrate binding domain 88 294 5.9E-39 T 28-03-2018 IPR005119 LysR, substrate-binding AM393_RS02000 f1f015042486feaa309d44f005093c39 299 SUPERFAMILY SSF46785 1 111 2.94E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS02000 f1f015042486feaa309d44f005093c39 299 SUPERFAMILY SSF53850 88 297 2.35E-41 T 28-03-2018 AM393_RS02000 f1f015042486feaa309d44f005093c39 299 Gene3D G3DSA:3.40.190.10 178 265 7.1E-24 T 28-03-2018 AM393_RS02000 f1f015042486feaa309d44f005093c39 299 Gene3D G3DSA:3.40.190.10 89 177 1.7E-15 T 28-03-2018 AM393_RS02000 f1f015042486feaa309d44f005093c39 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 3.0E-16 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS02000 f1f015042486feaa309d44f005093c39 299 Gene3D G3DSA:1.10.10.10 1 87 6.3E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS03295 2cafa61c4f2db1851aa2d1a1dfd33ec4 159 PIRSF PIRSF036409 1 148 5.2E-49 T 28-03-2018 IPR012381 Ethanolamine/propanediol utilisation protein, EutP/PduV GO:0005524|GO:0006576 AM393_RS03295 2cafa61c4f2db1851aa2d1a1dfd33ec4 159 Pfam PF10662 Ethanolamine utilisation - propanediol utilisation 1 143 8.5E-28 T 28-03-2018 IPR012381 Ethanolamine/propanediol utilisation protein, EutP/PduV GO:0005524|GO:0006576 AM393_RS03295 2cafa61c4f2db1851aa2d1a1dfd33ec4 159 TIGRFAM TIGR02528 EutP: ethanolamine utilization protein, EutP 2 143 8.0E-47 T 28-03-2018 IPR012381 Ethanolamine/propanediol utilisation protein, EutP/PduV GO:0005524|GO:0006576 AM393_RS03295 2cafa61c4f2db1851aa2d1a1dfd33ec4 159 Gene3D G3DSA:3.40.50.300 2 157 3.5E-15 T 28-03-2018 AM393_RS03295 2cafa61c4f2db1851aa2d1a1dfd33ec4 159 SUPERFAMILY SSF52540 3 146 1.18E-16 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS08725 78b64283f1636dd2ae7ea2b46cfc0c8a 115 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 13 107 5.4E-22 T 28-03-2018 IPR009241 Toxin HigB-like AM393_RS22695 6c1be34ed9551ec2ce6f879f2d072a08 140 SUPERFAMILY SSF54637 1 128 1.87E-31 T 28-03-2018 IPR029069 HotDog domain AM393_RS22695 6c1be34ed9551ec2ce6f879f2d072a08 140 Gene3D G3DSA:3.10.129.10 1 129 1.6E-30 T 28-03-2018 AM393_RS22695 6c1be34ed9551ec2ce6f879f2d072a08 140 TIGRFAM TIGR02286 PaaD: phenylacetic acid degradation protein PaaD 21 132 2.3E-50 T 28-03-2018 IPR011973 Phenylacetic acid degradation protein PaaD GO:0016790 AM393_RS22695 6c1be34ed9551ec2ce6f879f2d072a08 140 Pfam PF03061 Thioesterase superfamily 49 122 8.1E-20 T 28-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AM393_RS22695 6c1be34ed9551ec2ce6f879f2d072a08 140 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 18 130 3.6E-35 T 28-03-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 AM393_RS04355 b4031508677eb50f6afe67cf913c38c9 188 SUPERFAMILY SSF56784 7 185 5.2E-45 T 28-03-2018 IPR023214 HAD-like domain AM393_RS04355 b4031508677eb50f6afe67cf913c38c9 188 TIGRFAM TIGR02009 PGMB-YQAB-SF: beta-phosphoglucomutase family hydrolase 5 185 1.4E-62 T 28-03-2018 IPR010976 Beta-phosphoglucomutase hydrolase AM393_RS04355 b4031508677eb50f6afe67cf913c38c9 188 Pfam PF13419 Haloacid dehalogenase-like hydrolase 8 183 3.0E-29 T 28-03-2018 IPR023214 HAD-like domain AM393_RS04355 b4031508677eb50f6afe67cf913c38c9 188 Gene3D G3DSA:1.10.150.240 18 75 7.5E-15 T 28-03-2018 IPR023198 Phosphoglycolate phosphatase, domain 2 AM393_RS04355 b4031508677eb50f6afe67cf913c38c9 188 Gene3D G3DSA:3.40.50.1000 76 186 1.4E-21 T 28-03-2018 IPR023214 HAD-like domain AM393_RS04355 b4031508677eb50f6afe67cf913c38c9 188 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 121 183 1.8E-14 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM393_RS10815 22fb78380dd843c227179c50b700501b 280 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 132 143 - T 28-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AM393_RS10815 22fb78380dd843c227179c50b700501b 280 Gene3D G3DSA:3.20.20.70 1 280 1.9E-88 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM393_RS10815 22fb78380dd843c227179c50b700501b 280 SUPERFAMILY SSF51569 3 279 3.22E-84 T 28-03-2018 AM393_RS10815 22fb78380dd843c227179c50b700501b 280 PIRSF PIRSF001359 1 280 6.0E-86 T 28-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AM393_RS10815 22fb78380dd843c227179c50b700501b 280 Pfam PF01116 Fructose-bisphosphate aldolase class-II 5 280 1.7E-87 T 28-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AM393_RS10815 22fb78380dd843c227179c50b700501b 280 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 279 1.8E-78 T 28-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AM393_RS24515 b483c58225908d22a584a1461a46d870 246 Pfam PF00486 Transcriptional regulatory protein, C terminal 162 235 1.3E-19 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM393_RS24515 b483c58225908d22a584a1461a46d870 246 Gene3D G3DSA:1.10.10.10 135 241 9.1E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS24515 b483c58225908d22a584a1461a46d870 246 SMART SM00448 5 117 2.7E-44 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM393_RS24515 b483c58225908d22a584a1461a46d870 246 SUPERFAMILY SSF52172 6 136 1.37E-44 T 28-03-2018 IPR011006 CheY-like superfamily AM393_RS24515 b483c58225908d22a584a1461a46d870 246 SUPERFAMILY SSF46894 136 236 2.61E-23 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM393_RS24515 b483c58225908d22a584a1461a46d870 246 Pfam PF00072 Response regulator receiver domain 7 118 2.3E-32 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM393_RS24515 b483c58225908d22a584a1461a46d870 246 SMART SM00862 159 235 5.8E-19 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM393_RS24515 b483c58225908d22a584a1461a46d870 246 Gene3D G3DSA:3.40.50.2300 5 134 4.5E-41 T 28-03-2018 AM393_RS06430 c12681a87f68e15899995ea33d16db0d 494 TIGRFAM TIGR03752 conj_TIGR03752: integrating conjugative element protein, PFL_4705 family 5 484 1.4E-176 T 28-03-2018 IPR021207 Integrating conjugative element protein, PFL4705 AM393_RS06430 c12681a87f68e15899995ea33d16db0d 494 Gene3D G3DSA:1.20.5.340 55 150 2.4E-4 T 28-03-2018 AM393_RS08280 1b66155b4d8467c2d27853090801ec3e 84 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 5 80 25.285 T 28-03-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM393_RS08280 1b66155b4d8467c2d27853090801ec3e 84 ProSitePatterns PS00056 Ribosomal protein S17 signature. 56 68 - T 28-03-2018 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM393_RS08280 1b66155b4d8467c2d27853090801ec3e 84 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 1 76 2.0E-35 T 28-03-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM393_RS08280 1b66155b4d8467c2d27853090801ec3e 84 PRINTS PR00973 Ribosomal protein S17 family signature 24 47 3.6E-14 T 28-03-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM393_RS08280 1b66155b4d8467c2d27853090801ec3e 84 PRINTS PR00973 Ribosomal protein S17 family signature 56 66 3.6E-14 T 28-03-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM393_RS08280 1b66155b4d8467c2d27853090801ec3e 84 PRINTS PR00973 Ribosomal protein S17 family signature 66 73 3.6E-14 T 28-03-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM393_RS08280 1b66155b4d8467c2d27853090801ec3e 84 Gene3D G3DSA:2.40.50.140 5 82 5.4E-35 T 28-03-2018 AM393_RS08280 1b66155b4d8467c2d27853090801ec3e 84 SUPERFAMILY SSF50249 6 82 1.41E-33 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM393_RS08280 1b66155b4d8467c2d27853090801ec3e 84 Pfam PF00366 Ribosomal protein S17 10 76 4.2E-34 T 28-03-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM393_RS08280 1b66155b4d8467c2d27853090801ec3e 84 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 6 76 1.1E-38 T 28-03-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM393_RS15050 d03c045ee1b0d2b984e111add39effe8 532 Pfam PF00394 Multicopper oxidase 226 289 3.0E-6 T 28-03-2018 IPR001117 Multicopper oxidase, type 1 GO:0055114 AM393_RS15050 d03c045ee1b0d2b984e111add39effe8 532 SUPERFAMILY SSF49503 415 532 1.46E-28 T 28-03-2018 IPR008972 Cupredoxin AM393_RS15050 d03c045ee1b0d2b984e111add39effe8 532 Gene3D G3DSA:2.60.40.420 170 357 4.2E-23 T 28-03-2018 IPR008972 Cupredoxin AM393_RS15050 d03c045ee1b0d2b984e111add39effe8 532 Gene3D G3DSA:2.60.40.420 29 169 2.7E-28 T 28-03-2018 IPR008972 Cupredoxin AM393_RS15050 d03c045ee1b0d2b984e111add39effe8 532 SUPERFAMILY SSF49503 33 166 4.29E-31 T 28-03-2018 IPR008972 Cupredoxin AM393_RS15050 d03c045ee1b0d2b984e111add39effe8 532 Pfam PF07731 Multicopper oxidase 422 532 8.9E-25 T 28-03-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 AM393_RS15050 d03c045ee1b0d2b984e111add39effe8 532 Pfam PF07732 Multicopper oxidase 63 166 1.5E-31 T 28-03-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 AM393_RS15050 d03c045ee1b0d2b984e111add39effe8 532 Gene3D G3DSA:2.60.40.420 358 532 2.3E-34 T 28-03-2018 IPR008972 Cupredoxin AM393_RS15050 d03c045ee1b0d2b984e111add39effe8 532 ProSitePatterns PS00080 Multicopper oxidases signature 2. 515 526 - T 28-03-2018 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 AM393_RS15050 d03c045ee1b0d2b984e111add39effe8 532 SUPERFAMILY SSF49503 172 296 3.69E-30 T 28-03-2018 IPR008972 Cupredoxin AM393_RS15050 d03c045ee1b0d2b984e111add39effe8 532 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 1 22 4.4E-5 T 28-03-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AM393_RS07220 fadde267234fbd2cb733cd92c83bf23f 122 Gene3D G3DSA:3.40.50.300 11 121 6.8E-4 T 28-03-2018 AM393_RS07220 fadde267234fbd2cb733cd92c83bf23f 122 Pfam PF06476 Protein of unknown function (DUF1090) 9 115 4.8E-37 T 28-03-2018 IPR009468 Protein of unknown function DUF1090 AM393_RS06745 6c1eace22b72b6c412e6ee687827bbeb 289 Pfam PF06445 GyrI-like small molecule binding domain 135 288 1.3E-35 T 28-03-2018 IPR029442 GyrI-like small molecule binding domain AM393_RS06745 6c1eace22b72b6c412e6ee687827bbeb 289 Gene3D G3DSA:1.10.10.60 12 67 1.5E-14 T 28-03-2018 AM393_RS06745 6c1eace22b72b6c412e6ee687827bbeb 289 SMART SM00342 28 112 4.1E-25 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM393_RS06745 6c1eace22b72b6c412e6ee687827bbeb 289 SUPERFAMILY SSF46689 64 120 3.49E-11 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS06745 6c1eace22b72b6c412e6ee687827bbeb 289 SUPERFAMILY SSF46689 12 62 3.36E-11 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS06745 6c1eace22b72b6c412e6ee687827bbeb 289 Gene3D G3DSA:1.10.10.60 68 124 1.1E-12 T 28-03-2018 AM393_RS06745 6c1eace22b72b6c412e6ee687827bbeb 289 SMART SM00871 135 289 4.3E-41 T 28-03-2018 IPR010499 Bacterial transcription activator, effector binding AM393_RS06745 6c1eace22b72b6c412e6ee687827bbeb 289 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 65 108 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM393_RS06745 6c1eace22b72b6c412e6ee687827bbeb 289 Pfam PF12833 Helix-turn-helix domain 34 114 8.8E-22 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM393_RS06745 6c1eace22b72b6c412e6ee687827bbeb 289 SUPERFAMILY SSF55136 135 288 4.84E-35 T 28-03-2018 AM393_RS06745 6c1eace22b72b6c412e6ee687827bbeb 289 Gene3D G3DSA:3.20.80.10 125 288 2.3E-29 T 28-03-2018 IPR011256 Regulatory factor, effector binding domain AM393_RS06745 6c1eace22b72b6c412e6ee687827bbeb 289 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 81 96 1.8E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM393_RS06745 6c1eace22b72b6c412e6ee687827bbeb 289 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 96 112 1.8E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM393_RS14440 240b989d4971f4dcb751e8a523be22ca 312 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 18 306 5.4E-117 T 28-03-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 AM393_RS14440 240b989d4971f4dcb751e8a523be22ca 312 PIRSF PIRSF004491 1 312 1.5E-103 T 28-03-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 AM393_RS14440 240b989d4971f4dcb751e8a523be22ca 312 Pfam PF01687 Riboflavin kinase 184 306 1.8E-37 T 28-03-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 Reactome: R-HSA-196843 AM393_RS14440 240b989d4971f4dcb751e8a523be22ca 312 SUPERFAMILY SSF52374 15 175 4.5E-35 T 28-03-2018 AM393_RS14440 240b989d4971f4dcb751e8a523be22ca 312 Pfam PF06574 FAD synthetase 12 167 1.8E-58 T 28-03-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 AM393_RS14440 240b989d4971f4dcb751e8a523be22ca 312 Gene3D G3DSA:3.40.50.620 1 179 1.1E-49 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM393_RS14440 240b989d4971f4dcb751e8a523be22ca 312 Gene3D G3DSA:2.40.30.30 180 311 2.9E-38 T 28-03-2018 IPR023465 Riboflavin kinase domain GO:0008531|GO:0009231 Reactome: R-HSA-196843 AM393_RS14440 240b989d4971f4dcb751e8a523be22ca 312 SUPERFAMILY SSF82114 174 307 1.98E-42 T 28-03-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 Reactome: R-HSA-196843 AM393_RS14440 240b989d4971f4dcb751e8a523be22ca 312 SMART SM00904 183 307 1.3E-61 T 28-03-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 Reactome: R-HSA-196843 AM393_RS25550 ae506bb6fb300f65d695576ac744cbf2 388 SUPERFAMILY SSF103473 5 378 3.4E-52 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS25550 ae506bb6fb300f65d695576ac744cbf2 388 Gene3D G3DSA:1.20.1250.20 4 190 6.9E-26 T 28-03-2018 AM393_RS25550 ae506bb6fb300f65d695576ac744cbf2 388 Gene3D G3DSA:1.20.1250.20 191 387 2.0E-16 T 28-03-2018 AM393_RS25550 ae506bb6fb300f65d695576ac744cbf2 388 Pfam PF07690 Major Facilitator Superfamily 10 322 1.9E-32 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS03780 b21125d1cc1b03bd7cb5e6187184472d 226 SMART SM00358 156 224 1.6E-23 T 28-03-2018 IPR014720 Double-stranded RNA-binding domain AM393_RS03780 b21125d1cc1b03bd7cb5e6187184472d 226 Gene3D G3DSA:1.10.1520.10 5 148 1.9E-44 T 28-03-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 AM393_RS03780 b21125d1cc1b03bd7cb5e6187184472d 226 Gene3D G3DSA:3.30.160.20 149 226 6.0E-21 T 28-03-2018 AM393_RS03780 b21125d1cc1b03bd7cb5e6187184472d 226 Hamap MF_00104 Ribonuclease 3 [rnc]. 9 220 29.454 T 28-03-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 AM393_RS03780 b21125d1cc1b03bd7cb5e6187184472d 226 SMART SM00535 21 149 5.5E-58 T 28-03-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 AM393_RS03780 b21125d1cc1b03bd7cb5e6187184472d 226 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 9 223 3.3E-74 T 28-03-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 AM393_RS03780 b21125d1cc1b03bd7cb5e6187184472d 226 Pfam PF14622 Ribonuclease-III-like 20 141 5.5E-34 T 28-03-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 AM393_RS03780 b21125d1cc1b03bd7cb5e6187184472d 226 SUPERFAMILY SSF54768 109 223 2.36E-27 T 28-03-2018 AM393_RS03780 b21125d1cc1b03bd7cb5e6187184472d 226 Pfam PF00035 Double-stranded RNA binding motif 156 223 1.4E-14 T 28-03-2018 IPR014720 Double-stranded RNA-binding domain AM393_RS03780 b21125d1cc1b03bd7cb5e6187184472d 226 ProSitePatterns PS00517 Ribonuclease III family signature. 38 46 - T 28-03-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 AM393_RS03780 b21125d1cc1b03bd7cb5e6187184472d 226 SUPERFAMILY SSF69065 5 159 8.55E-50 T 28-03-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 AM393_RS18295 d3f4b7ab35725c61847aec3fcb892ab0 87 Pfam PF04359 Protein of unknown function (DUF493) 7 87 1.0E-28 T 28-03-2018 IPR007454 Uncharacterised protein family UPF0250 AM393_RS18295 d3f4b7ab35725c61847aec3fcb892ab0 87 SUPERFAMILY SSF117991 1 87 5.89E-31 T 28-03-2018 IPR027471 YbeD-like domain AM393_RS18295 d3f4b7ab35725c61847aec3fcb892ab0 87 Gene3D G3DSA:3.30.70.260 5 87 2.1E-30 T 28-03-2018 AM393_RS18295 d3f4b7ab35725c61847aec3fcb892ab0 87 Hamap MF_00659 UPF0250 protein YbeD [ybeD]. 1 87 26.555 T 28-03-2018 IPR007454 Uncharacterised protein family UPF0250 AM393_RS02540 ed74dd4ae9f114d1d1cbef8d7d0fbfd0 540 Pfam PF04324 BFD-like [2Fe-2S] binding domain 430 482 2.8E-9 T 28-03-2018 IPR007419 BFD-like [2Fe-2S]-binding domain AM393_RS02540 ed74dd4ae9f114d1d1cbef8d7d0fbfd0 540 SUPERFAMILY SSF54373 224 315 2.22E-10 T 28-03-2018 AM393_RS02540 ed74dd4ae9f114d1d1cbef8d7d0fbfd0 540 Pfam PF01266 FAD dependent oxidoreductase 9 357 7.5E-54 T 28-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AM393_RS02540 ed74dd4ae9f114d1d1cbef8d7d0fbfd0 540 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 350 360 - T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 AM393_RS02540 ed74dd4ae9f114d1d1cbef8d7d0fbfd0 540 TIGRFAM TIGR03377 glycerol3P_GlpA: glycerol-3-phosphate dehydrogenase, anaerobic, A subunit 8 536 3.8E-259 T 28-03-2018 IPR017752 Glycerol-3-phosphate dehydrogenase, GlpA subunit GO:0004368|GO:0005886|GO:0010181|GO:0046174|GO:0050660|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 AM393_RS02540 ed74dd4ae9f114d1d1cbef8d7d0fbfd0 540 SUPERFAMILY SSF51905 292 320 2.7E-47 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS02540 ed74dd4ae9f114d1d1cbef8d7d0fbfd0 540 SUPERFAMILY SSF51905 8 224 2.7E-47 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS02540 ed74dd4ae9f114d1d1cbef8d7d0fbfd0 540 Gene3D G3DSA:3.50.50.60 2 391 1.3E-54 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS02540 ed74dd4ae9f114d1d1cbef8d7d0fbfd0 540 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 80 92 3.9E-22 T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 AM393_RS02540 ed74dd4ae9f114d1d1cbef8d7d0fbfd0 540 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 20 30 3.9E-22 T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 AM393_RS02540 ed74dd4ae9f114d1d1cbef8d7d0fbfd0 540 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 36 48 3.9E-22 T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 AM393_RS02540 ed74dd4ae9f114d1d1cbef8d7d0fbfd0 540 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 345 357 3.9E-22 T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 AM393_RS02540 ed74dd4ae9f114d1d1cbef8d7d0fbfd0 540 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 7 19 3.9E-22 T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 AM393_RS02540 ed74dd4ae9f114d1d1cbef8d7d0fbfd0 540 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 309 315 3.9E-22 T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 AM393_RS02540 ed74dd4ae9f114d1d1cbef8d7d0fbfd0 540 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 12 29 - T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 AM393_RS02455 46536b4301fa6039c4d109e3f0ad429e 547 SUPERFAMILY SSF90123 3 299 4.05E-26 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AM393_RS02455 46536b4301fa6039c4d109e3f0ad429e 547 Gene3D G3DSA:3.40.50.300 319 546 4.2E-44 T 28-03-2018 AM393_RS02455 46536b4301fa6039c4d109e3f0ad429e 547 SUPERFAMILY SSF52540 316 530 8.88E-48 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS02455 46536b4301fa6039c4d109e3f0ad429e 547 TIGRFAM TIGR01194 cyc_pep_trnsptr: cyclic peptide transporter 2 527 5.0E-111 T 28-03-2018 IPR005898 Cyclic peptide transporter GO:0005524|GO:0015197|GO:0015833|GO:0016021 AM393_RS02455 46536b4301fa6039c4d109e3f0ad429e 547 SMART SM00382 348 534 3.7E-15 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS02455 46536b4301fa6039c4d109e3f0ad429e 547 Gene3D G3DSA:1.20.1560.10 2 312 2.1E-22 T 28-03-2018 AM393_RS02455 46536b4301fa6039c4d109e3f0ad429e 547 Pfam PF00005 ABC transporter 342 477 1.3E-26 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS02455 46536b4301fa6039c4d109e3f0ad429e 547 ProSitePatterns PS00211 ABC transporters family signature. 450 464 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS12445 6050ce80acbce26e4265f56e481369fa 111 SUPERFAMILY SSF57783 1 36 5.1E-14 T 28-03-2018 AM393_RS12445 6050ce80acbce26e4265f56e481369fa 111 Gene3D G3DSA:2.30.30.40 43 110 1.5E-37 T 28-03-2018 AM393_RS12445 6050ce80acbce26e4265f56e481369fa 111 Gene3D G3DSA:2.20.25.10 1 39 1.8E-16 T 28-03-2018 AM393_RS12445 6050ce80acbce26e4265f56e481369fa 111 SUPERFAMILY SSF82057 39 110 3.48E-29 T 28-03-2018 AM393_RS12445 6050ce80acbce26e4265f56e481369fa 111 TIGRFAM TIGR00686 phnA: putative alkylphosphonate utilization operon protein PhnA 2 111 1.0E-59 T 28-03-2018 IPR004624 PhnA protein AM393_RS12445 6050ce80acbce26e4265f56e481369fa 111 Pfam PF03831 PhnA domain 44 111 1.0E-34 T 28-03-2018 IPR013988 PhnA protein, C-terminal AM393_RS12445 6050ce80acbce26e4265f56e481369fa 111 Pfam PF08274 PhnA Zinc-Ribbon 2 30 1.9E-13 T 28-03-2018 IPR013987 PhnA protein, N-terminal AM393_RS23520 e256cc5701a64d4edb1c12dd75ea1d7d 157 Pfam PF04074 Domain of unknown function (DUF386) 1 150 5.4E-33 T 28-03-2018 IPR004375 YhcH/YjgK/YiaL family AM393_RS23520 e256cc5701a64d4edb1c12dd75ea1d7d 157 Gene3D G3DSA:2.60.120.370 1 154 7.2E-40 T 28-03-2018 IPR004375 YhcH/YjgK/YiaL family AM393_RS23520 e256cc5701a64d4edb1c12dd75ea1d7d 157 SUPERFAMILY SSF51197 1 154 4.94E-32 T 28-03-2018 AM393_RS23520 e256cc5701a64d4edb1c12dd75ea1d7d 157 TIGRFAM TIGR00022 TIGR00022: YhcH/YjgK/YiaL family protein 1 153 4.7E-33 T 28-03-2018 IPR004375 YhcH/YjgK/YiaL family AM393_RS18190 fc6f8cc2d5d683732cbd40981796495f 180 Pfam PF03079 ARD/ARD' family 18 165 1.2E-34 T 28-03-2018 IPR004313 Acireductone dioxygenase ARD family GO:0010309|GO:0055114 KEGG: 00270+1.13.11.54|MetaCyc: PWY-4361|Reactome: R-HSA-1237112 AM393_RS18190 fc6f8cc2d5d683732cbd40981796495f 180 SUPERFAMILY SSF51182 4 178 7.48E-45 T 28-03-2018 IPR011051 RmlC-like cupin domain AM393_RS18190 fc6f8cc2d5d683732cbd40981796495f 180 Hamap MF_01682 Acireductone dioxygenase [mtnD]. 1 172 38.074 T 28-03-2018 IPR023956 Acireductone dioxygenase ARD, bacteria GO:0005506|GO:0010308|GO:0010309|GO:0016151|GO:0019284|GO:0055114 KEGG: 00270+1.13.11.53+1.13.11.54|MetaCyc: PWY-4361|MetaCyc: PWY-5389 AM393_RS18190 fc6f8cc2d5d683732cbd40981796495f 180 Gene3D G3DSA:2.60.120.10 2 157 2.9E-42 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AM393_RS10220 65f777e08f328036e31f572f45e8687c 148 SUPERFAMILY SSF55729 4 138 9.43E-21 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM393_RS10220 65f777e08f328036e31f572f45e8687c 148 Pfam PF13673 Acetyltransferase (GNAT) domain 39 139 1.6E-16 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AM393_RS10220 65f777e08f328036e31f572f45e8687c 148 Gene3D G3DSA:3.40.630.30 4 143 1.1E-20 T 28-03-2018 AM393_RS25925 9a6cb5ed0f8d734607ef1885c092e7ec 345 SUPERFAMILY SSF141986 205 334 2.88E-25 T 28-03-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain AM393_RS25925 9a6cb5ed0f8d734607ef1885c092e7ec 345 Gene3D G3DSA:3.40.50.10740 1 168 5.0E-44 T 28-03-2018 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal domain AM393_RS25925 9a6cb5ed0f8d734607ef1885c092e7ec 345 PIRSF PIRSF028757 3 345 8.8E-94 T 28-03-2018 IPR003507 Peptidase family S66 AM393_RS25925 9a6cb5ed0f8d734607ef1885c092e7ec 345 SUPERFAMILY SSF52317 2 168 5.49E-43 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AM393_RS25925 9a6cb5ed0f8d734607ef1885c092e7ec 345 Pfam PF02016 LD-carboxypeptidase 15 332 1.1E-72 T 28-03-2018 IPR003507 Peptidase family S66 AM393_RS25925 9a6cb5ed0f8d734607ef1885c092e7ec 345 Gene3D G3DSA:3.50.30.60 169 345 7.6E-36 T 28-03-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain AM393_RS24755 844097ea1261cac6602724a8f96fa794 283 Gene3D G3DSA:3.60.15.10 13 253 3.1E-22 T 28-03-2018 IPR001279 Metallo-beta-lactamase AM393_RS24755 844097ea1261cac6602724a8f96fa794 283 SMART SM00849 36 218 1.4E-12 T 28-03-2018 IPR001279 Metallo-beta-lactamase AM393_RS24755 844097ea1261cac6602724a8f96fa794 283 SUPERFAMILY SSF56281 21 242 4.35E-35 T 28-03-2018 IPR001279 Metallo-beta-lactamase AM393_RS24755 844097ea1261cac6602724a8f96fa794 283 Pfam PF00753 Metallo-beta-lactamase superfamily 34 218 6.0E-7 T 28-03-2018 IPR001279 Metallo-beta-lactamase AM393_RS24630 4297fcda91eb66caf73f7e0a35750411 314 Gene3D G3DSA:2.60.120.280 26 188 8.6E-20 T 28-03-2018 AM393_RS24630 4297fcda91eb66caf73f7e0a35750411 314 Pfam PF12833 Helix-turn-helix domain 242 310 5.2E-12 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM393_RS24630 4297fcda91eb66caf73f7e0a35750411 314 Pfam PF02311 AraC-like ligand binding domain 56 108 1.8E-6 T 28-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AM393_RS24630 4297fcda91eb66caf73f7e0a35750411 314 Gene3D G3DSA:1.10.10.60 262 312 1.2E-8 T 28-03-2018 AM393_RS24630 4297fcda91eb66caf73f7e0a35750411 314 Gene3D G3DSA:1.10.10.60 189 261 0.25 T 28-03-2018 AM393_RS24630 4297fcda91eb66caf73f7e0a35750411 314 SMART SM00342 227 310 2.8E-5 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM393_RS24630 4297fcda91eb66caf73f7e0a35750411 314 SUPERFAMILY SSF51182 55 114 3.51E-9 T 28-03-2018 IPR011051 RmlC-like cupin domain AM393_RS24630 4297fcda91eb66caf73f7e0a35750411 314 SUPERFAMILY SSF46689 264 311 4.93E-7 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS23085 aa2aa3d846d1366bb12e4808a49541c6 239 Gene3D G3DSA:1.10.10.10 144 235 6.4E-4 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS23085 aa2aa3d846d1366bb12e4808a49541c6 239 PIRSF PIRSF006171 1 230 6.8E-80 T 28-03-2018 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0001071|GO:0003677|GO:0005737|GO:0009605 AM393_RS23085 aa2aa3d846d1366bb12e4808a49541c6 239 Pfam PF00072 Response regulator receiver domain 4 117 4.3E-21 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM393_RS23085 aa2aa3d846d1366bb12e4808a49541c6 239 SMART SM00448 2 117 1.2E-21 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM393_RS23085 aa2aa3d846d1366bb12e4808a49541c6 239 SUPERFAMILY SSF52172 3 131 4.7E-30 T 28-03-2018 IPR011006 CheY-like superfamily AM393_RS23085 aa2aa3d846d1366bb12e4808a49541c6 239 Gene3D G3DSA:3.40.50.2300 1 143 4.3E-29 T 28-03-2018 AM393_RS09570 b34858aa01bfd3a826699760d5645d8a 339 PIRSF PIRSF000114 1 336 1.2E-98 T 28-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 AM393_RS09570 b34858aa01bfd3a826699760d5645d8a 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 60 87 2.3E-42 T 28-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 AM393_RS09570 b34858aa01bfd3a826699760d5645d8a 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 177 201 2.3E-42 T 28-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 AM393_RS09570 b34858aa01bfd3a826699760d5645d8a 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 136 156 2.3E-42 T 28-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 AM393_RS09570 b34858aa01bfd3a826699760d5645d8a 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 202 226 2.3E-42 T 28-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 AM393_RS09570 b34858aa01bfd3a826699760d5645d8a 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 10 27 2.3E-42 T 28-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 AM393_RS09570 b34858aa01bfd3a826699760d5645d8a 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 242 259 2.3E-42 T 28-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 AM393_RS09570 b34858aa01bfd3a826699760d5645d8a 339 SUPERFAMILY SSF51735 8 182 4.99E-52 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS09570 b34858aa01bfd3a826699760d5645d8a 339 Gene3D G3DSA:1.10.1040.10 193 339 6.7E-53 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AM393_RS09570 b34858aa01bfd3a826699760d5645d8a 339 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 192 213 - T 28-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 AM393_RS09570 b34858aa01bfd3a826699760d5645d8a 339 Gene3D G3DSA:3.40.50.720 4 182 9.0E-38 T 28-03-2018 AM393_RS09570 b34858aa01bfd3a826699760d5645d8a 339 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 6 326 38.083 T 28-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 AM393_RS09570 b34858aa01bfd3a826699760d5645d8a 339 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 8 163 4.6E-49 T 28-03-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 AM393_RS09570 b34858aa01bfd3a826699760d5645d8a 339 SUPERFAMILY SSF48179 184 335 6.97E-56 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AM393_RS09570 b34858aa01bfd3a826699760d5645d8a 339 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 184 322 8.2E-52 T 28-03-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 AM393_RS15790 0de219ea25e7ebe354e9b3eede4085fa 921 ProSitePatterns PS00622 LuxR-type HTH domain signature. 874 901 - T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS15790 0de219ea25e7ebe354e9b3eede4085fa 921 Gene3D G3DSA:1.10.10.10 858 920 6.4E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS15790 0de219ea25e7ebe354e9b3eede4085fa 921 SMART SM00421 857 914 6.1E-26 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS15790 0de219ea25e7ebe354e9b3eede4085fa 921 Gene3D G3DSA:3.40.50.300 42 197 4.1E-5 T 28-03-2018 AM393_RS15790 0de219ea25e7ebe354e9b3eede4085fa 921 Pfam PF00196 Bacterial regulatory proteins, luxR family 860 912 5.0E-21 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS15790 0de219ea25e7ebe354e9b3eede4085fa 921 SUPERFAMILY SSF46894 855 920 1.16E-20 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM393_RS15790 0de219ea25e7ebe354e9b3eede4085fa 921 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 874 890 5.3E-13 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS15790 0de219ea25e7ebe354e9b3eede4085fa 921 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 860 874 5.3E-13 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS15790 0de219ea25e7ebe354e9b3eede4085fa 921 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 890 902 5.3E-13 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS15790 0de219ea25e7ebe354e9b3eede4085fa 921 Gene3D G3DSA:1.25.40.10 356 829 5.0E-28 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM393_RS15790 0de219ea25e7ebe354e9b3eede4085fa 921 SUPERFAMILY SSF52540 45 225 8.63E-10 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS12640 4d00390f528740e2b984e0f406dab83e 344 Gene3D G3DSA:2.60.40.1090 186 342 1.0E-13 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM393_RS12640 4d00390f528740e2b984e0f406dab83e 344 SUPERFAMILY SSF49401 198 341 7.95E-10 T 28-03-2018 IPR008966 Adhesion domain AM393_RS12640 4d00390f528740e2b984e0f406dab83e 344 Pfam PF00419 Fimbrial protein 191 342 4.5E-10 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM393_RS23375 d5bf15804e4d76d1db0ea93ea11c2cba 421 SUPERFAMILY SSF142764 3 418 7.59E-129 T 28-03-2018 AM393_RS23375 d5bf15804e4d76d1db0ea93ea11c2cba 421 Gene3D G3DSA:3.40.50.10840 2 236 2.0E-74 T 28-03-2018 IPR010737 Putative sugar-binding, N-terminal domain AM393_RS23375 d5bf15804e4d76d1db0ea93ea11c2cba 421 Gene3D G3DSA:1.10.10.10 301 363 0.002 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS23375 d5bf15804e4d76d1db0ea93ea11c2cba 421 Pfam PF17042 Putative nucleotide-binding of sugar-metabolising enzyme 254 411 2.2E-38 T 28-03-2018 IPR031475 Putative nucleotide-binding C-terminal domain AM393_RS23375 d5bf15804e4d76d1db0ea93ea11c2cba 421 Pfam PF07005 Putative sugar-binding N-terminal domain 3 226 6.8E-66 T 28-03-2018 IPR010737 Putative sugar-binding, N-terminal domain AM393_RS03180 2cb94481ca44e269964e9a005252ea02 338 ProSitePatterns PS00757 Prokaryotic sulfate-binding proteins signature 2. 151 159 - T 28-03-2018 IPR034408 Sulphate/thiosulphate-binding site GO:1901681 AM393_RS03180 2cb94481ca44e269964e9a005252ea02 338 SUPERFAMILY SSF53850 24 332 9.2E-81 T 28-03-2018 AM393_RS03180 2cb94481ca44e269964e9a005252ea02 338 Pfam PF13531 Bacterial extracellular solute-binding protein 38 286 6.3E-40 T 28-03-2018 AM393_RS03180 2cb94481ca44e269964e9a005252ea02 338 Gene3D G3DSA:3.40.190.10 133 335 6.4E-40 T 28-03-2018 AM393_RS03180 2cb94481ca44e269964e9a005252ea02 338 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 15 332 1.5E-180 T 28-03-2018 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 AM393_RS03180 2cb94481ca44e269964e9a005252ea02 338 ProSitePatterns PS00401 Prokaryotic sulfate-binding proteins signature 1. 53 65 - T 28-03-2018 IPR000957 Sulphate/thiosulphate-binding, conserved site AM393_RS03180 2cb94481ca44e269964e9a005252ea02 338 Gene3D G3DSA:3.40.190.10 24 132 9.9E-17 T 28-03-2018 AM393_RS15150 88d1883df9e8dd9e1a6cb38582e552c3 161 SUPERFAMILY SSF103054 81 158 8.5E-16 T 28-03-2018 IPR023229 Type II secretion system protein M, periplasmic domain AM393_RS15150 88d1883df9e8dd9e1a6cb38582e552c3 161 Pfam PF04612 Type II secretion system (T2SS), protein M 1 157 4.8E-44 T 28-03-2018 IPR007690 Type II secretion system, protein M GO:0009306 AM393_RS15150 88d1883df9e8dd9e1a6cb38582e552c3 161 Gene3D G3DSA:3.30.1360.100 82 156 1.7E-16 T 28-03-2018 IPR023229 Type II secretion system protein M, periplasmic domain AM393_RS06160 68fa5bb87d0115bd659ce10626322938 235 Pfam PF04231 Endonuclease I 45 230 1.2E-47 T 28-03-2018 IPR007346 Endonuclease I GO:0004518 AM393_RS06160 68fa5bb87d0115bd659ce10626322938 235 SUPERFAMILY SSF54060 24 230 2.71E-89 T 28-03-2018 AM393_RS07130 b1c844088596af244af30a469af63549 495 Pfam PF00005 ABC transporter 20 162 6.0E-27 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS07130 b1c844088596af244af30a469af63549 495 Pfam PF00005 ABC transporter 274 422 4.5E-20 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS07130 b1c844088596af244af30a469af63549 495 SUPERFAMILY SSF52540 3 222 6.35E-53 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS07130 b1c844088596af244af30a469af63549 495 SMART SM00382 281 471 2.3E-8 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS07130 b1c844088596af244af30a469af63549 495 SMART SM00382 29 210 9.8E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS07130 b1c844088596af244af30a469af63549 495 ProSitePatterns PS00211 ABC transporters family signature. 395 409 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS07130 b1c844088596af244af30a469af63549 495 SUPERFAMILY SSF52540 274 472 3.7E-45 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS07130 b1c844088596af244af30a469af63549 495 Gene3D G3DSA:3.40.50.300 244 481 4.2E-38 T 28-03-2018 AM393_RS07130 b1c844088596af244af30a469af63549 495 Gene3D G3DSA:3.40.50.300 1 243 1.3E-51 T 28-03-2018 AM393_RS00070 14d9ae408432b6d3435608967d084992 828 SUPERFAMILY SSF69279 15 198 4.99E-50 T 28-03-2018 AM393_RS00070 14d9ae408432b6d3435608967d084992 828 Gene3D G3DSA:2.40.50.230 388 472 1.6E-20 T 28-03-2018 IPR006531 Gp5 N-terminal AM393_RS00070 14d9ae408432b6d3435608967d084992 828 Pfam PF13296 Putative type VI secretion system Rhs element Vgr 490 593 7.5E-33 T 28-03-2018 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain AM393_RS00070 14d9ae408432b6d3435608967d084992 828 Pfam PF10106 Uncharacterized protein conserved in bacteria (DUF2345) 610 758 3.3E-54 T 28-03-2018 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal AM393_RS00070 14d9ae408432b6d3435608967d084992 828 Gene3D G3DSA:3.55.50.10 107 203 6.1E-27 T 28-03-2018 AM393_RS00070 14d9ae408432b6d3435608967d084992 828 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 17 517 3.3E-79 T 28-03-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset AM393_RS00070 14d9ae408432b6d3435608967d084992 828 SUPERFAMILY SSF69255 382 472 2.33E-24 T 28-03-2018 AM393_RS00070 14d9ae408432b6d3435608967d084992 828 SUPERFAMILY SSF69349 462 571 4.71E-6 T 28-03-2018 AM393_RS00070 14d9ae408432b6d3435608967d084992 828 SUPERFAMILY SSF69349 700 758 4.71E-6 T 28-03-2018 AM393_RS00070 14d9ae408432b6d3435608967d084992 828 SUPERFAMILY SSF69279 200 383 3.74E-44 T 28-03-2018 AM393_RS00070 14d9ae408432b6d3435608967d084992 828 Pfam PF05954 Phage late control gene D protein (GPD) 35 355 4.1E-68 T 28-03-2018 AM393_RS00070 14d9ae408432b6d3435608967d084992 828 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 27 516 1.0E-99 T 28-03-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein AM393_RS00070 14d9ae408432b6d3435608967d084992 828 Gene3D G3DSA:2.160.20.10 580 825 0.0021 T 28-03-2018 IPR012334 Pectin lyase fold AM393_RS24885 7792697bad7c567d6cf00a57d51861f9 161 Pfam PF00866 Ring hydroxylating beta subunit 14 153 2.8E-44 T 28-03-2018 IPR000391 Ring-hydroxylating dioxygenase beta subunit GO:0003824|GO:0006725|GO:0055114 AM393_RS24885 7792697bad7c567d6cf00a57d51861f9 161 Gene3D G3DSA:3.10.450.50 1 161 1.1E-30 T 28-03-2018 AM393_RS24885 7792697bad7c567d6cf00a57d51861f9 161 TIGRFAM TIGR03232 benzo_1_2_benB: benzoate 1,2-dioxygenase, small subunit 7 161 4.5E-70 T 28-03-2018 IPR017641 Benzoate 1,2-dioxygenase, small subunit GO:0016708|GO:0055114 AM393_RS24885 7792697bad7c567d6cf00a57d51861f9 161 SUPERFAMILY SSF54427 4 161 7.03E-51 T 28-03-2018 IPR032710 NTF2-like domain AM393_RS03495 777505431b841e2f932d99ad78c094ab 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 177 190 1.1E-7 T 28-03-2018 AM393_RS03495 777505431b841e2f932d99ad78c094ab 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 54 63 1.1E-7 T 28-03-2018 AM393_RS03495 777505431b841e2f932d99ad78c094ab 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 81 92 1.1E-7 T 28-03-2018 AM393_RS03495 777505431b841e2f932d99ad78c094ab 525 SUPERFAMILY SSF52317 5 204 4.74E-60 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AM393_RS03495 777505431b841e2f932d99ad78c094ab 525 PRINTS PR00097 Anthranilate synthase component II signature 81 92 2.6E-6 T 28-03-2018 AM393_RS03495 777505431b841e2f932d99ad78c094ab 525 PRINTS PR00097 Anthranilate synthase component II signature 54 63 2.6E-6 T 28-03-2018 AM393_RS03495 777505431b841e2f932d99ad78c094ab 525 PRINTS PR00097 Anthranilate synthase component II signature 177 190 2.6E-6 T 28-03-2018 AM393_RS03495 777505431b841e2f932d99ad78c094ab 525 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 212 525 7.9E-156 T 28-03-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 AM393_RS03495 777505431b841e2f932d99ad78c094ab 525 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 7 525 56.635 T 28-03-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 AM393_RS03495 777505431b841e2f932d99ad78c094ab 525 Pfam PF02540 NAD synthase 217 258 5.3E-7 T 28-03-2018 IPR022310 NAD/GMP synthase AM393_RS03495 777505431b841e2f932d99ad78c094ab 525 SUPERFAMILY SSF54810 405 525 1.7E-51 T 28-03-2018 AM393_RS03495 777505431b841e2f932d99ad78c094ab 525 Pfam PF00958 GMP synthase C terminal domain 433 524 7.4E-44 T 28-03-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 AM393_RS03495 777505431b841e2f932d99ad78c094ab 525 Pfam PF00117 Glutamine amidotransferase class-I 12 199 4.5E-42 T 28-03-2018 IPR017926 Glutamine amidotransferase AM393_RS03495 777505431b841e2f932d99ad78c094ab 525 Gene3D G3DSA:3.40.50.880 5 222 5.3E-50 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AM393_RS03495 777505431b841e2f932d99ad78c094ab 525 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 51 65 9.4E-7 T 28-03-2018 AM393_RS03495 777505431b841e2f932d99ad78c094ab 525 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 10 24 9.4E-7 T 28-03-2018 AM393_RS03495 777505431b841e2f932d99ad78c094ab 525 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 81 97 9.4E-7 T 28-03-2018 AM393_RS03495 777505431b841e2f932d99ad78c094ab 525 Gene3D G3DSA:3.30.300.10 401 525 4.8E-53 T 28-03-2018 AM393_RS03495 777505431b841e2f932d99ad78c094ab 525 SUPERFAMILY SSF52402 197 420 6.4E-60 T 28-03-2018 AM393_RS03495 777505431b841e2f932d99ad78c094ab 525 Gene3D G3DSA:3.40.50.620 223 400 2.8E-36 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM393_RS03495 777505431b841e2f932d99ad78c094ab 525 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 10 205 4.2E-85 T 28-03-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 AM393_RS02115 7d1c08bb7e9eeb33f981d24bdb9d3185 277 ProSitePatterns PS00654 PRD domain signature. 97 109 - T 28-03-2018 IPR001550 Transcription antiterminator, conserved site GO:0003723|GO:0045893 AM393_RS02115 7d1c08bb7e9eeb33f981d24bdb9d3185 277 SMART SM01061 1 59 1.6E-29 T 28-03-2018 IPR004341 CAT RNA-binding domain GO:0003723 AM393_RS02115 7d1c08bb7e9eeb33f981d24bdb9d3185 277 SUPERFAMILY SSF63520 59 166 5.23E-27 T 28-03-2018 IPR011608 PRD domain GO:0006355 AM393_RS02115 7d1c08bb7e9eeb33f981d24bdb9d3185 277 Gene3D G3DSA:2.30.24.10 1 62 1.0E-23 T 28-03-2018 IPR004341 CAT RNA-binding domain GO:0003723 AM393_RS02115 7d1c08bb7e9eeb33f981d24bdb9d3185 277 Gene3D G3DSA:1.10.1790.10 63 162 1.5E-23 T 28-03-2018 IPR011608 PRD domain GO:0006355 AM393_RS02115 7d1c08bb7e9eeb33f981d24bdb9d3185 277 Gene3D G3DSA:1.10.1790.10 163 275 1.9E-25 T 28-03-2018 IPR011608 PRD domain GO:0006355 AM393_RS02115 7d1c08bb7e9eeb33f981d24bdb9d3185 277 SUPERFAMILY SSF50151 1 54 1.44E-17 T 28-03-2018 IPR004341 CAT RNA-binding domain GO:0003723 AM393_RS02115 7d1c08bb7e9eeb33f981d24bdb9d3185 277 SUPERFAMILY SSF63520 170 273 4.45E-27 T 28-03-2018 IPR011608 PRD domain GO:0006355 AM393_RS02115 7d1c08bb7e9eeb33f981d24bdb9d3185 277 Pfam PF03123 CAT RNA binding domain 1 54 4.0E-23 T 28-03-2018 IPR004341 CAT RNA-binding domain GO:0003723 AM393_RS02115 7d1c08bb7e9eeb33f981d24bdb9d3185 277 Pfam PF00874 PRD domain 87 161 3.0E-21 T 28-03-2018 IPR011608 PRD domain GO:0006355 AM393_RS02115 7d1c08bb7e9eeb33f981d24bdb9d3185 277 Pfam PF00874 PRD domain 179 271 9.0E-20 T 28-03-2018 IPR011608 PRD domain GO:0006355 AM393_RS19295 19e3f5d68879f413082240e24a412f0f 357 Pfam PF13377 Periplasmic binding protein-like domain 173 337 1.6E-26 T 28-03-2018 AM393_RS19295 19e3f5d68879f413082240e24a412f0f 357 Gene3D G3DSA:3.40.50.2300 84 169 4.9E-12 T 28-03-2018 AM393_RS19295 19e3f5d68879f413082240e24a412f0f 357 Gene3D G3DSA:3.40.50.2300 170 340 4.1E-33 T 28-03-2018 AM393_RS19295 19e3f5d68879f413082240e24a412f0f 357 SMART SM00354 4 71 0.0068 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM393_RS19295 19e3f5d68879f413082240e24a412f0f 357 Pfam PF00356 Bacterial regulatory proteins, lacI family 9 47 1.6E-6 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM393_RS19295 19e3f5d68879f413082240e24a412f0f 357 Gene3D G3DSA:1.10.260.40 3 83 3.7E-13 T 28-03-2018 AM393_RS19295 19e3f5d68879f413082240e24a412f0f 357 SUPERFAMILY SSF47413 5 59 5.2E-9 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM393_RS19295 19e3f5d68879f413082240e24a412f0f 357 SUPERFAMILY SSF53822 72 338 1.65E-39 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AM393_RS22620 08797c8b19b2d3198af47464d39cfe37 300 Gene3D G3DSA:1.10.10.60 203 248 3.0E-7 T 28-03-2018 AM393_RS22620 08797c8b19b2d3198af47464d39cfe37 300 Gene3D G3DSA:2.60.120.10 3 202 0.0011 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AM393_RS22620 08797c8b19b2d3198af47464d39cfe37 300 SMART SM00342 212 296 2.3E-28 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM393_RS22620 08797c8b19b2d3198af47464d39cfe37 300 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 280 296 9.7E-7 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM393_RS22620 08797c8b19b2d3198af47464d39cfe37 300 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 265 280 9.7E-7 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM393_RS22620 08797c8b19b2d3198af47464d39cfe37 300 Pfam PF14525 AraC-binding-like domain 14 184 6.8E-23 T 28-03-2018 IPR035418 Transcription regulator HTH, AraC- type, ligand binding domain-like AM393_RS22620 08797c8b19b2d3198af47464d39cfe37 300 SUPERFAMILY SSF46689 247 299 1.3E-11 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS22620 08797c8b19b2d3198af47464d39cfe37 300 Gene3D G3DSA:1.10.10.60 249 300 2.9E-14 T 28-03-2018 AM393_RS22620 08797c8b19b2d3198af47464d39cfe37 300 Pfam PF12833 Helix-turn-helix domain 218 298 3.6E-22 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM393_RS23945 5655e300e9442c882fb8665129c01002 229 Pfam PF00834 Ribulose-phosphate 3 epimerase family 5 199 1.6E-58 T 28-03-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AM393_RS23945 5655e300e9442c882fb8665129c01002 229 SUPERFAMILY SSF51366 3 210 7.28E-50 T 28-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AM393_RS23945 5655e300e9442c882fb8665129c01002 229 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 134 156 - T 28-03-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AM393_RS23945 5655e300e9442c882fb8665129c01002 229 Gene3D G3DSA:3.20.20.70 1 219 6.0E-56 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM393_RS23945 5655e300e9442c882fb8665129c01002 229 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 31 45 - T 28-03-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AM393_RS03940 4c93919dee167022f19ef611a84dfe75 373 PIRSF PIRSF001499 1 373 2.7E-184 T 28-03-2018 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein GO:0004106|GO:0005737|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626 AM393_RS03940 4c93919dee167022f19ef611a84dfe75 373 Pfam PF02153 Prephenate dehydrogenase 137 344 3.0E-29 T 28-03-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 AM393_RS03940 4c93919dee167022f19ef611a84dfe75 373 SUPERFAMILY SSF51735 91 238 1.69E-39 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS03940 4c93919dee167022f19ef611a84dfe75 373 Gene3D G3DSA:1.10.3660.10 249 372 5.2E-33 T 28-03-2018 AM393_RS03940 4c93919dee167022f19ef611a84dfe75 373 Gene3D G3DSA:3.40.50.720 90 247 5.0E-27 T 28-03-2018 AM393_RS03940 4c93919dee167022f19ef611a84dfe75 373 TIGRFAM TIGR01799 CM_T: chorismate mutase 5 87 8.2E-45 T 28-03-2018 IPR011277 Chorismate mutase, T-protein GO:0004106|GO:0005737|GO:0006571|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626 AM393_RS03940 4c93919dee167022f19ef611a84dfe75 373 SMART SM00830 9 89 9.9E-30 T 28-03-2018 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AM393_RS03940 4c93919dee167022f19ef611a84dfe75 373 Gene3D G3DSA:1.20.59.10 2 89 1.3E-23 T 28-03-2018 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AM393_RS03940 4c93919dee167022f19ef611a84dfe75 373 SUPERFAMILY SSF48600 4 88 1.01E-22 T 28-03-2018 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AM393_RS03940 4c93919dee167022f19ef611a84dfe75 373 Pfam PF01817 Chorismate mutase type II 9 86 2.7E-20 T 28-03-2018 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AM393_RS03940 4c93919dee167022f19ef611a84dfe75 373 SUPERFAMILY SSF48179 241 366 1.03E-42 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AM393_RS07245 2620060eb943432fa7b7615c4e48cb3f 328 SUPERFAMILY SSF47616 174 324 6.68E-36 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like AM393_RS07245 2620060eb943432fa7b7615c4e48cb3f 328 Pfam PF13410 Glutathione S-transferase, C-terminal domain 203 256 2.1E-12 T 28-03-2018 AM393_RS07245 2620060eb943432fa7b7615c4e48cb3f 328 Pfam PF13409 Glutathione S-transferase, N-terminal domain 62 158 2.6E-22 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AM393_RS07245 2620060eb943432fa7b7615c4e48cb3f 328 Gene3D G3DSA:3.40.30.10 40 188 5.3E-36 T 28-03-2018 AM393_RS07245 2620060eb943432fa7b7615c4e48cb3f 328 SUPERFAMILY SSF52833 41 99 3.24E-14 T 28-03-2018 IPR012336 Thioredoxin-like fold AM393_RS07245 2620060eb943432fa7b7615c4e48cb3f 328 SUPERFAMILY SSF52833 126 162 3.24E-14 T 28-03-2018 IPR012336 Thioredoxin-like fold AM393_RS07245 2620060eb943432fa7b7615c4e48cb3f 328 PIRSF PIRSF015753 4 324 1.6E-133 T 28-03-2018 IPR016639 Glutathione S-transferase (GST) KEGG: 00480+2.5.1.18|KEGG: 00980+2.5.1.18|KEGG: 00982+2.5.1.18|MetaCyc: PWY-4061|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7533 AM393_RS07245 2620060eb943432fa7b7615c4e48cb3f 328 Gene3D G3DSA:1.20.1050.10 189 326 5.8E-43 T 28-03-2018 AM393_RS23080 b9e5c47d54eba7d455d0ea491903ae32 316 SUPERFAMILY SSF143631 6 296 3.4E-86 T 28-03-2018 IPR003374 ApbE-like domain AM393_RS23080 b9e5c47d54eba7d455d0ea491903ae32 316 Pfam PF02424 ApbE family 14 285 2.3E-75 T 28-03-2018 IPR024932 Flavin transferase ApbE GO:0017013 AM393_RS23080 b9e5c47d54eba7d455d0ea491903ae32 316 PIRSF PIRSF006268 1 306 2.0E-88 T 28-03-2018 IPR024932 Flavin transferase ApbE GO:0017013 AM393_RS23080 b9e5c47d54eba7d455d0ea491903ae32 316 Gene3D G3DSA:3.10.520.10 7 303 1.6E-51 T 28-03-2018 AM393_RS08245 56aa23d4e137982cf428a6ee5372d2cc 117 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 1 117 7.7E-44 T 28-03-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS08245 56aa23d4e137982cf428a6ee5372d2cc 117 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 3 117 2.9E-47 T 28-03-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM393_RS08245 56aa23d4e137982cf428a6ee5372d2cc 117 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 2 117 26.115 T 28-03-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM393_RS08245 56aa23d4e137982cf428a6ee5372d2cc 117 SUPERFAMILY SSF53137 3 115 5.45E-54 T 28-03-2018 AM393_RS08245 56aa23d4e137982cf428a6ee5372d2cc 117 Gene3D G3DSA:3.30.420.100 1 117 1.5E-39 T 28-03-2018 AM393_RS13960 ee7ec06d0d5e3222337554d847aad3a3 406 Gene3D G3DSA:3.20.20.10 36 271 3.7E-37 T 28-03-2018 IPR029066 PLP-binding barrel AM393_RS13960 ee7ec06d0d5e3222337554d847aad3a3 406 SMART SM01119 295 393 2.3E-35 T 28-03-2018 IPR026956 D-serine dehydratase-like domain AM393_RS13960 ee7ec06d0d5e3222337554d847aad3a3 406 Pfam PF01168 Alanine racemase, N-terminal domain 36 216 4.5E-15 T 28-03-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM393_RS13960 ee7ec06d0d5e3222337554d847aad3a3 406 Pfam PF14031 Putative serine dehydratase domain 295 392 1.4E-14 T 28-03-2018 IPR026956 D-serine dehydratase-like domain AM393_RS13960 ee7ec06d0d5e3222337554d847aad3a3 406 SUPERFAMILY SSF51419 36 272 3.05E-33 T 28-03-2018 IPR029066 PLP-binding barrel AM393_RS21375 6966fadc801fc855ad2e96f01f146212 447 SUPERFAMILY SSF53223 7 196 1.09E-73 T 28-03-2018 AM393_RS21375 6966fadc801fc855ad2e96f01f146212 447 PIRSF PIRSF000185 22 447 3.2E-116 T 28-03-2018 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 AM393_RS21375 6966fadc801fc855ad2e96f01f146212 447 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 122 135 - T 28-03-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AM393_RS21375 6966fadc801fc855ad2e96f01f146212 447 Gene3D G3DSA:3.40.50.720 209 373 1.7E-46 T 28-03-2018 AM393_RS21375 6966fadc801fc855ad2e96f01f146212 447 SMART SM00839 204 445 5.1E-91 T 28-03-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AM393_RS21375 6966fadc801fc855ad2e96f01f146212 447 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 202 445 3.2E-87 T 28-03-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AM393_RS21375 6966fadc801fc855ad2e96f01f146212 447 Gene3D G3DSA:3.40.50.10860 62 190 1.0E-54 T 28-03-2018 AM393_RS21375 6966fadc801fc855ad2e96f01f146212 447 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 57 183 2.5E-49 T 28-03-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AM393_RS21375 6966fadc801fc855ad2e96f01f146212 447 Gene3D G3DSA:1.10.285.10 6 61 1.9E-7 T 28-03-2018 AM393_RS21375 6966fadc801fc855ad2e96f01f146212 447 Gene3D G3DSA:1.10.285.10 374 447 8.2E-26 T 28-03-2018 AM393_RS21375 6966fadc801fc855ad2e96f01f146212 447 SUPERFAMILY SSF51735 202 446 5.19E-76 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS21375 6966fadc801fc855ad2e96f01f146212 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 235 255 6.1E-34 T 28-03-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AM393_RS21375 6966fadc801fc855ad2e96f01f146212 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 114 128 6.1E-34 T 28-03-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AM393_RS21375 6966fadc801fc855ad2e96f01f146212 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 372 383 6.1E-34 T 28-03-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AM393_RS21375 6966fadc801fc855ad2e96f01f146212 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 193 215 6.1E-34 T 28-03-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AM393_RS13760 87d2086ec4238e476b672f51d5fd317f 302 Gene3D G3DSA:3.40.190.10 98 186 1.3E-14 T 28-03-2018 AM393_RS13760 87d2086ec4238e476b672f51d5fd317f 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 1.1E-15 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS13760 87d2086ec4238e476b672f51d5fd317f 302 Pfam PF03466 LysR substrate binding domain 97 296 4.2E-28 T 28-03-2018 IPR005119 LysR, substrate-binding AM393_RS13760 87d2086ec4238e476b672f51d5fd317f 302 SUPERFAMILY SSF46785 4 86 5.65E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS13760 87d2086ec4238e476b672f51d5fd317f 302 Gene3D G3DSA:1.10.10.10 3 91 1.3E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS13760 87d2086ec4238e476b672f51d5fd317f 302 SUPERFAMILY SSF53850 91 295 1.23E-39 T 28-03-2018 AM393_RS13760 87d2086ec4238e476b672f51d5fd317f 302 Gene3D G3DSA:3.40.190.10 187 268 1.2E-12 T 28-03-2018 AM393_RS06255 b3137b3f9c33cce46b55aec7f7f4d6a7 712 SUPERFAMILY SSF55904 563 711 5.62E-46 T 28-03-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 AM393_RS06255 b3137b3f9c33cce46b55aec7f7f4d6a7 712 SUPERFAMILY SSF52172 1 100 1.64E-24 T 28-03-2018 IPR011006 CheY-like superfamily AM393_RS06255 b3137b3f9c33cce46b55aec7f7f4d6a7 712 Gene3D G3DSA:3.90.100.10 593 712 1.7E-35 T 28-03-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 AM393_RS06255 b3137b3f9c33cce46b55aec7f7f4d6a7 712 Gene3D G3DSA:3.40.50.220 3 100 1.3E-22 T 28-03-2018 IPR027464 Ornithine decarboxylase, N-terminal domain KEGG: 00330+4.1.1.17|KEGG: 00480+4.1.1.17|MetaCyc: PWY-46|MetaCyc: PWY-6305 AM393_RS06255 b3137b3f9c33cce46b55aec7f7f4d6a7 712 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 4 79 1.4E-13 T 28-03-2018 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 AM393_RS06255 b3137b3f9c33cce46b55aec7f7f4d6a7 712 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 342 356 - T 28-03-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 AM393_RS06255 b3137b3f9c33cce46b55aec7f7f4d6a7 712 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 568 697 4.8E-48 T 28-03-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 AM393_RS06255 b3137b3f9c33cce46b55aec7f7f4d6a7 712 SUPERFAMILY SSF53383 101 558 1.47E-121 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM393_RS06255 b3137b3f9c33cce46b55aec7f7f4d6a7 712 Gene3D G3DSA:3.40.640.10 101 412 1.9E-36 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM393_RS06255 b3137b3f9c33cce46b55aec7f7f4d6a7 712 PIRSF PIRSF009393 2 712 5.6E-288 T 28-03-2018 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 AM393_RS06255 b3137b3f9c33cce46b55aec7f7f4d6a7 712 Gene3D G3DSA:3.90.1150.10 413 592 4.6E-55 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM393_RS06255 b3137b3f9c33cce46b55aec7f7f4d6a7 712 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 101 543 1.4E-197 T 28-03-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 AM393_RS22715 7e8f0f41eb85dd4f6a86ed4b490125c0 198 Gene3D G3DSA:2.160.10.10 1 175 3.2E-41 T 28-03-2018 AM393_RS22715 7e8f0f41eb85dd4f6a86ed4b490125c0 198 TIGRFAM TIGR02287 PaaY: phenylacetic acid degradation protein PaaY 3 195 4.6E-110 T 28-03-2018 IPR011974 Phenylacetic acid degradation protein PaaY AM393_RS22715 7e8f0f41eb85dd4f6a86ed4b490125c0 198 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 15 45 9.7E-5 T 28-03-2018 IPR001451 Hexapeptide repeat AM393_RS22715 7e8f0f41eb85dd4f6a86ed4b490125c0 198 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 88 122 1.2E-7 T 28-03-2018 IPR001451 Hexapeptide repeat AM393_RS22715 7e8f0f41eb85dd4f6a86ed4b490125c0 198 SUPERFAMILY SSF51161 2 168 1.26E-45 T 28-03-2018 IPR011004 Trimeric LpxA-like AM393_RS09070 1be233a3e234e126127a5c6c9e4967d2 490 SUPERFAMILY SSF103473 9 289 5.75E-21 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS09070 1be233a3e234e126127a5c6c9e4967d2 490 SUPERFAMILY SSF103473 217 480 1.31E-7 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS09070 1be233a3e234e126127a5c6c9e4967d2 490 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 9 483 5.9E-186 T 28-03-2018 IPR005279 Dipeptide/tripeptide permease GO:0015197|GO:0015833|GO:0016020 AM393_RS09070 1be233a3e234e126127a5c6c9e4967d2 490 Pfam PF00854 POT family 82 443 4.4E-90 T 28-03-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-427975 AM393_RS09070 1be233a3e234e126127a5c6c9e4967d2 490 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 145 157 - T 28-03-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 AM393_RS09070 1be233a3e234e126127a5c6c9e4967d2 490 Gene3D G3DSA:1.20.1250.20 1 196 1.9E-22 T 28-03-2018 AM393_RS09070 1be233a3e234e126127a5c6c9e4967d2 490 Hamap MF_01879 Dipeptide and tripeptide permease B [dtpB]. 3 486 46.01 T 28-03-2018 IPR023778 Amino acid/peptide transporter family, dipeptide/tripeptide permease B AM393_RS09070 1be233a3e234e126127a5c6c9e4967d2 490 Gene3D G3DSA:1.20.1250.20 262 482 2.6E-10 T 28-03-2018 AM393_RS20540 da47a84c4062f30d937e4298c6a3b153 286 Pfam PF02678 Pirin 20 127 5.3E-35 T 28-03-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 AM393_RS20540 da47a84c4062f30d937e4298c6a3b153 286 PIRSF PIRSF006232 2 286 4.4E-90 T 28-03-2018 IPR012093 Pirin Reactome: R-HSA-8935690 AM393_RS20540 da47a84c4062f30d937e4298c6a3b153 286 Pfam PF05726 Pirin C-terminal cupin domain 182 284 1.0E-29 T 28-03-2018 IPR008778 Pirin, C-terminal domain Reactome: R-HSA-8935690 AM393_RS20540 da47a84c4062f30d937e4298c6a3b153 286 SUPERFAMILY SSF51182 2 285 1.17E-83 T 28-03-2018 IPR011051 RmlC-like cupin domain AM393_RS20540 da47a84c4062f30d937e4298c6a3b153 286 Gene3D G3DSA:2.60.120.10 1 257 7.1E-83 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AM393_RS08450 6ba6c50e53e771e7fcc280874e178b44 134 SUPERFAMILY SSF82784 1 133 9.68E-43 T 28-03-2018 IPR003718 OsmC/Ohr family AM393_RS08450 6ba6c50e53e771e7fcc280874e178b44 134 Gene3D G3DSA:3.30.300.20 35 133 2.7E-20 T 28-03-2018 IPR015946 K homology domain-like, alpha/beta AM393_RS08450 6ba6c50e53e771e7fcc280874e178b44 134 Pfam PF02566 OsmC-like protein 30 127 1.2E-19 T 28-03-2018 IPR003718 OsmC/Ohr family AM393_RS08450 6ba6c50e53e771e7fcc280874e178b44 134 Gene3D G3DSA:2.20.25.10 1 29 8.2E-15 T 28-03-2018 AM393_RS16030 17a989b455ef230ea6338219c6533145 255 Gene3D G3DSA:3.40.50.300 1 219 4.9E-62 T 28-03-2018 AM393_RS16030 17a989b455ef230ea6338219c6533145 255 ProSitePatterns PS00211 ABC transporters family signature. 129 143 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS16030 17a989b455ef230ea6338219c6533145 255 SMART SM00382 26 205 1.3E-18 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS16030 17a989b455ef230ea6338219c6533145 255 Pfam PF00005 ABC transporter 17 156 7.9E-33 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS16030 17a989b455ef230ea6338219c6533145 255 SUPERFAMILY SSF52540 1 213 1.13E-67 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS22705 4a779e6aefc420246b4175474a327e61 438 Gene3D G3DSA:3.40.50.980 97 256 9.7E-22 T 28-03-2018 AM393_RS22705 4a779e6aefc420246b4175474a327e61 438 Gene3D G3DSA:3.40.50.980 12 96 0.22 T 28-03-2018 AM393_RS22705 4a779e6aefc420246b4175474a327e61 438 Pfam PF14535 AMP-binding enzyme C-terminal domain 336 432 3.8E-26 T 28-03-2018 IPR028154 AMP-dependent ligase, C-terminal AM393_RS22705 4a779e6aefc420246b4175474a327e61 438 Pfam PF00501 AMP-binding enzyme 78 289 2.0E-15 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AM393_RS22705 4a779e6aefc420246b4175474a327e61 438 SUPERFAMILY SSF56801 16 395 1.57E-61 T 28-03-2018 AM393_RS22705 4a779e6aefc420246b4175474a327e61 438 PIRSF PIRSF006444 1 434 8.5E-207 T 28-03-2018 IPR011880 Phenylacetate-CoA ligase GO:0010124|GO:0047475 KEGG: 00360+6.2.1.30|MetaCyc: PWY-1341|MetaCyc: PWY-6318|MetaCyc: PWY-7716 AM393_RS22705 4a779e6aefc420246b4175474a327e61 438 TIGRFAM TIGR02155 PA_CoA_ligase: phenylacetate-CoA ligase 11 432 1.6E-234 T 28-03-2018 IPR011880 Phenylacetate-CoA ligase GO:0010124|GO:0047475 KEGG: 00360+6.2.1.30|MetaCyc: PWY-1341|MetaCyc: PWY-6318|MetaCyc: PWY-7716 AM393_RS22705 4a779e6aefc420246b4175474a327e61 438 Gene3D G3DSA:3.30.300.30 326 434 9.1E-9 T 28-03-2018 AM393_RS28670 e0f04d57214ebcbf2f1e01c607af7be2 141 SUPERFAMILY SSF54427 21 136 4.75E-23 T 28-03-2018 IPR032710 NTF2-like domain AM393_RS28670 e0f04d57214ebcbf2f1e01c607af7be2 141 Pfam PF08332 Calcium/calmodulin dependent protein kinase II association domain 22 139 1.5E-15 T 28-03-2018 IPR013543 Calcium/calmodulin-dependent protein kinase II, association-domain GO:0004683|GO:0005516|GO:0006468 Reactome: R-HSA-3371571|Reactome: R-HSA-399719|Reactome: R-HSA-438066|Reactome: R-HSA-442729|Reactome: R-HSA-442742|Reactome: R-HSA-442982|Reactome: R-HSA-5576892|Reactome: R-HSA-5578775|Reactome: R-HSA-5673001|Reactome: R-HSA-877300|Reactome: R-HSA-936837 AM393_RS28670 e0f04d57214ebcbf2f1e01c607af7be2 141 Gene3D G3DSA:3.10.450.50 11 141 4.1E-16 T 28-03-2018 AM393_RS28670 e0f04d57214ebcbf2f1e01c607af7be2 141 TIGRFAM TIGR02246 TIGR02246: conserved hypothetical protein 23 139 3.9E-11 T 28-03-2018 IPR011944 Steroid delta5-4-isomerase KEGG: 00140+5.3.3.1|KEGG: 00984+5.3.3.1|MetaCyc: PWY-2582|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-699|MetaCyc: PWY-7299 AM393_RS28670 e0f04d57214ebcbf2f1e01c607af7be2 141 PIRSF PIRSF028470 5 141 1.3E-56 T 28-03-2018 IPR016887 Uncharacterised conserved protein UCP028470, steroid isomerase-related AM393_RS20120 506c51cc101ce4d284900c0e13267cac 871 Pfam PF11940 Domain of unknown function (DUF3458) Ig-like fold 445 546 1.2E-32 T 28-03-2018 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold AM393_RS20120 506c51cc101ce4d284900c0e13267cac 871 Gene3D G3DSA:2.60.40.1730 15 195 1.0E-31 T 28-03-2018 AM393_RS20120 506c51cc101ce4d284900c0e13267cac 871 Pfam PF01433 Peptidase family M1 domain 209 437 1.1E-59 T 28-03-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AM393_RS20120 506c51cc101ce4d284900c0e13267cac 871 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 12 870 0.0 T 28-03-2018 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 AM393_RS20120 506c51cc101ce4d284900c0e13267cac 871 Pfam PF17432 Domain of unknown function (DUF3458_C) ARM repeats 549 871 1.2E-120 T 28-03-2018 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal AM393_RS20120 506c51cc101ce4d284900c0e13267cac 871 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 259 269 1.5E-7 T 28-03-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AM393_RS20120 506c51cc101ce4d284900c0e13267cac 871 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 295 310 1.5E-7 T 28-03-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AM393_RS20120 506c51cc101ce4d284900c0e13267cac 871 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 177 192 1.5E-7 T 28-03-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AM393_RS20120 506c51cc101ce4d284900c0e13267cac 871 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 314 326 1.5E-7 T 28-03-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AM393_RS20120 506c51cc101ce4d284900c0e13267cac 871 Gene3D G3DSA:1.25.50.10 548 871 1.4E-125 T 28-03-2018 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal AM393_RS20120 506c51cc101ce4d284900c0e13267cac 871 SUPERFAMILY SSF63737 1 194 5.49E-44 T 28-03-2018 AM393_RS20120 506c51cc101ce4d284900c0e13267cac 871 Gene3D G3DSA:1.10.390.10 281 444 2.8E-51 T 28-03-2018 AM393_RS20120 506c51cc101ce4d284900c0e13267cac 871 SUPERFAMILY SSF55486 205 451 5.68E-75 T 28-03-2018 AM393_RS21450 2b9f17ad5973baa72f488f86c64c9611 321 Hamap MF_00767 Succinylglutamate desuccinylase [astE]. 1 321 150.282 T 28-03-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 AM393_RS21450 2b9f17ad5973baa72f488f86c64c9611 321 SUPERFAMILY SSF53187 3 319 2.58E-87 T 28-03-2018 AM393_RS21450 2b9f17ad5973baa72f488f86c64c9611 321 TIGRFAM TIGR03242 arg_catab_astE: succinylglutamate desuccinylase 3 317 9.9E-128 T 28-03-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 AM393_RS21450 2b9f17ad5973baa72f488f86c64c9611 321 PIRSF PIRSF017020 1 321 3.0E-114 T 28-03-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 AM393_RS21450 2b9f17ad5973baa72f488f86c64c9611 321 Gene3D G3DSA:3.40.630.10 36 293 2.7E-32 T 28-03-2018 AM393_RS21450 2b9f17ad5973baa72f488f86c64c9611 321 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 46 318 3.3E-65 T 28-03-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 AM393_RS02775 852adfffe31ead6970f67621efd7d845 120 SUPERFAMILY SSF55620 7 120 9.45E-30 T 28-03-2018 AM393_RS02775 852adfffe31ead6970f67621efd7d845 120 Gene3D G3DSA:3.30.1130.10 1 120 2.2E-30 T 28-03-2018 AM393_RS02775 852adfffe31ead6970f67621efd7d845 120 SMART SM00905 8 118 2.5E-32 T 28-03-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 AM393_RS02775 852adfffe31ead6970f67621efd7d845 120 TIGRFAM TIGR00526 folB_dom: FolB domain 7 120 1.2E-35 T 28-03-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 AM393_RS02775 852adfffe31ead6970f67621efd7d845 120 Pfam PF02152 Dihydroneopterin aldolase 8 116 1.2E-24 T 28-03-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 AM393_RS02190 9f79c10379765169954922c9d8320593 277 TIGRFAM TIGR02821 fghA_ester_D: S-formylglutathione hydrolase 2 275 3.4E-118 T 28-03-2018 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801|Reactome: R-HSA-156590 AM393_RS02190 9f79c10379765169954922c9d8320593 277 SUPERFAMILY SSF53474 1 275 6.83E-89 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AM393_RS02190 9f79c10379765169954922c9d8320593 277 Pfam PF00756 Putative esterase 21 270 1.4E-69 T 28-03-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 AM393_RS02190 9f79c10379765169954922c9d8320593 277 Gene3D G3DSA:3.40.50.1820 1 275 4.3E-46 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AM393_RS04295 bf95ca94552359bdf57e6868b7ae8cdc 355 Gene3D G3DSA:1.10.3720.10 107 338 1.9E-35 T 28-03-2018 AM393_RS04295 bf95ca94552359bdf57e6868b7ae8cdc 355 SUPERFAMILY SSF161098 143 325 1.7E-43 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS04295 bf95ca94552359bdf57e6868b7ae8cdc 355 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 164 328 1.1E-25 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS16500 0c4b7eb57a744e7f3e0322a45146d63c 122 SUPERFAMILY SSF47781 37 120 2.33E-24 T 28-03-2018 IPR010994 RuvA domain 2-like AM393_RS16500 0c4b7eb57a744e7f3e0322a45146d63c 122 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 54 122 4.4E-31 T 28-03-2018 IPR004509 Competence protein ComEA, helix-hairpin-helix domain AM393_RS16500 0c4b7eb57a744e7f3e0322a45146d63c 122 Gene3D G3DSA:1.10.150.310 79 122 4.7E-13 T 28-03-2018 AM393_RS16500 0c4b7eb57a744e7f3e0322a45146d63c 122 SMART SM00278 100 119 2.0 T 28-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AM393_RS16500 0c4b7eb57a744e7f3e0322a45146d63c 122 SMART SM00278 70 89 42.0 T 28-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AM393_RS16500 0c4b7eb57a744e7f3e0322a45146d63c 122 Gene3D G3DSA:1.10.150.20 25 78 1.7E-8 T 28-03-2018 AM393_RS16500 0c4b7eb57a744e7f3e0322a45146d63c 122 Pfam PF12836 Helix-hairpin-helix motif 59 121 7.0E-20 T 28-03-2018 AM393_RS26595 d957f6e8acfd6d0b29b322a7f7e04269 275 Gene3D G3DSA:1.10.287.70 154 202 4.3E-12 T 28-03-2018 AM393_RS26595 d957f6e8acfd6d0b29b322a7f7e04269 275 PRINTS PR00169 Potassium channel signature 87 107 1.6E-32 T 28-03-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 AM393_RS26595 d957f6e8acfd6d0b29b322a7f7e04269 275 PRINTS PR00169 Potassium channel signature 183 205 1.6E-32 T 28-03-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 AM393_RS26595 d957f6e8acfd6d0b29b322a7f7e04269 275 PRINTS PR00169 Potassium channel signature 212 238 1.6E-32 T 28-03-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 AM393_RS26595 d957f6e8acfd6d0b29b322a7f7e04269 275 PRINTS PR00169 Potassium channel signature 154 177 1.6E-32 T 28-03-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 AM393_RS26595 d957f6e8acfd6d0b29b322a7f7e04269 275 PRINTS PR00169 Potassium channel signature 125 151 1.6E-32 T 28-03-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 AM393_RS26595 d957f6e8acfd6d0b29b322a7f7e04269 275 PRINTS PR00169 Potassium channel signature 15 43 1.6E-32 T 28-03-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 AM393_RS26595 d957f6e8acfd6d0b29b322a7f7e04269 275 PRINTS PR00169 Potassium channel signature 61 84 1.6E-32 T 28-03-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 AM393_RS26595 d957f6e8acfd6d0b29b322a7f7e04269 275 SUPERFAMILY SSF81324 23 239 2.75E-46 T 28-03-2018 AM393_RS26595 d957f6e8acfd6d0b29b322a7f7e04269 275 Pfam PF00520 Ion transport protein 30 238 7.1E-27 T 28-03-2018 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 AM393_RS26595 d957f6e8acfd6d0b29b322a7f7e04269 275 Gene3D G3DSA:1.20.120.350 20 153 1.1E-20 T 28-03-2018 AM393_RS26595 d957f6e8acfd6d0b29b322a7f7e04269 275 Gene3D G3DSA:1.20.5.110 204 240 2.3E-14 T 28-03-2018 AM393_RS03720 79dbfdca0b2a433592c6123453d614b9 473 SUPERFAMILY SSF55874 307 470 5.5E-32 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS03720 79dbfdca0b2a433592c6123453d614b9 473 PRINTS PR00344 Bacterial sensor protein C-terminal signature 397 411 2.5E-9 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM393_RS03720 79dbfdca0b2a433592c6123453d614b9 473 PRINTS PR00344 Bacterial sensor protein C-terminal signature 415 425 2.5E-9 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM393_RS03720 79dbfdca0b2a433592c6123453d614b9 473 PRINTS PR00344 Bacterial sensor protein C-terminal signature 432 450 2.5E-9 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM393_RS03720 79dbfdca0b2a433592c6123453d614b9 473 PRINTS PR00344 Bacterial sensor protein C-terminal signature 456 469 2.5E-9 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM393_RS03720 79dbfdca0b2a433592c6123453d614b9 473 SUPERFAMILY SSF47384 236 317 1.96E-16 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM393_RS03720 79dbfdca0b2a433592c6123453d614b9 473 Gene3D G3DSA:3.30.565.10 313 472 1.5E-30 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS03720 79dbfdca0b2a433592c6123453d614b9 473 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 365 470 6.1E-16 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS03720 79dbfdca0b2a433592c6123453d614b9 473 SMART SM00388 249 317 1.4E-18 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM393_RS03720 79dbfdca0b2a433592c6123453d614b9 473 Gene3D G3DSA:1.10.287.130 239 312 1.4E-14 T 28-03-2018 AM393_RS03720 79dbfdca0b2a433592c6123453d614b9 473 SMART SM00387 360 472 6.4E-26 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS03720 79dbfdca0b2a433592c6123453d614b9 473 Pfam PF00512 His Kinase A (phospho-acceptor) domain 250 316 8.0E-15 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM393_RS18265 12d7769292d4227599aaedea8ec55227 127 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 5 122 18.724 T 28-03-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 AM393_RS18265 12d7769292d4227599aaedea8ec55227 127 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 7 116 1.2E-23 T 28-03-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 AM393_RS18265 12d7769292d4227599aaedea8ec55227 127 TIGRFAM TIGR00494 crcB: protein CrcB 7 121 2.2E-41 T 28-03-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 AM393_RS19885 19482be1d83f86720357aa16ea04d5a2 322 SUPERFAMILY SSF51905 3 315 2.02E-52 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS19885 19482be1d83f86720357aa16ea04d5a2 322 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 136 156 - T 28-03-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 AM393_RS19885 19482be1d83f86720357aa16ea04d5a2 322 Gene3D G3DSA:3.40.50.720 152 321 4.1E-24 T 28-03-2018 AM393_RS19885 19482be1d83f86720357aa16ea04d5a2 322 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 301 1.2E-50 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS19885 19482be1d83f86720357aa16ea04d5a2 322 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 4.4E-41 T 28-03-2018 AM393_RS19885 19482be1d83f86720357aa16ea04d5a2 322 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 4.4E-41 T 28-03-2018 AM393_RS19885 19482be1d83f86720357aa16ea04d5a2 322 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 267 289 4.4E-41 T 28-03-2018 AM393_RS19885 19482be1d83f86720357aa16ea04d5a2 322 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 237 253 4.4E-41 T 28-03-2018 AM393_RS19885 19482be1d83f86720357aa16ea04d5a2 322 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 4.4E-41 T 28-03-2018 AM393_RS19885 19482be1d83f86720357aa16ea04d5a2 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 2.5E-77 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM393_RS19885 19482be1d83f86720357aa16ea04d5a2 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 129 141 2.5E-77 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM393_RS19885 19482be1d83f86720357aa16ea04d5a2 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 62 72 2.5E-77 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM393_RS19885 19482be1d83f86720357aa16ea04d5a2 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 277 295 2.5E-77 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM393_RS19885 19482be1d83f86720357aa16ea04d5a2 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 239 260 2.5E-77 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM393_RS19885 19482be1d83f86720357aa16ea04d5a2 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 107 115 2.5E-77 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM393_RS19885 19482be1d83f86720357aa16ea04d5a2 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 41 56 2.5E-77 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM393_RS19885 19482be1d83f86720357aa16ea04d5a2 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 199 215 2.5E-77 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM393_RS19885 19482be1d83f86720357aa16ea04d5a2 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 144 168 2.5E-77 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM393_RS19885 19482be1d83f86720357aa16ea04d5a2 322 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 8 314 9.5E-125 T 28-03-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 AM393_RS19885 19482be1d83f86720357aa16ea04d5a2 322 Gene3D G3DSA:3.50.50.60 3 151 6.0E-22 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS00365 c2d42345831ee1c4babd7f8668857d2e 636 SUPERFAMILY SSF52540 13 232 1.28E-26 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS00365 c2d42345831ee1c4babd7f8668857d2e 636 SUPERFAMILY SSF52540 573 596 7.67E-11 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS00365 c2d42345831ee1c4babd7f8668857d2e 636 SUPERFAMILY SSF52540 40 88 7.67E-11 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS00365 c2d42345831ee1c4babd7f8668857d2e 636 SUPERFAMILY SSF52540 477 542 7.67E-11 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS00365 c2d42345831ee1c4babd7f8668857d2e 636 Pfam PF13307 Helicase C-terminal domain 459 616 8.1E-34 T 28-03-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 AM393_RS00365 c2d42345831ee1c4babd7f8668857d2e 636 SMART SM00487 16 314 0.0023 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AM393_RS00365 c2d42345831ee1c4babd7f8668857d2e 636 SMART SM00491 474 603 1.3E-54 T 28-03-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 AM393_RS00365 c2d42345831ee1c4babd7f8668857d2e 636 Gene3D G3DSA:3.40.50.300 17 419 3.5E-32 T 28-03-2018 AM393_RS00365 c2d42345831ee1c4babd7f8668857d2e 636 Gene3D G3DSA:3.40.50.300 443 622 1.6E-11 T 28-03-2018 AM393_RS00365 c2d42345831ee1c4babd7f8668857d2e 636 Pfam PF04851 Type III restriction enzyme, res subunit 18 232 1.3E-5 T 28-03-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 AM393_RS08055 f51fb4baa504c690c1d041dbefe248ec 259 Pfam PF03374 Phage antirepressor protein KilAC domain 142 244 8.4E-25 T 28-03-2018 IPR005039 Antirepressor protein, C-terminal GO:0003677 AM393_RS08055 f51fb4baa504c690c1d041dbefe248ec 259 Pfam PF08346 AntA/AntB antirepressor 23 97 1.3E-24 T 28-03-2018 IPR013557 AntA/AntB antirepressor AM393_RS01400 c1506eae1e22a574491f72bcf4d8871d 315 PIRSF PIRSF037112 27 315 7.1E-115 T 28-03-2018 IPR017113 Antirestriction, ArdC AM393_RS01400 c1506eae1e22a574491f72bcf4d8871d 315 Pfam PF08401 Domain of unknown function (DUF1738) 40 154 2.5E-38 T 28-03-2018 IPR013610 Domain of unknown function DUF1738 AM393_RS07065 ea401b2888d433d6b2e06883f3e24494 356 SUPERFAMILY SSF82549 10 355 4.97E-126 T 28-03-2018 AM393_RS07065 ea401b2888d433d6b2e06883f3e24494 356 TIGRFAM TIGR02363 dhaK1: dihydroxyacetone kinase, DhaK subunit 1 352 5.3E-154 T 28-03-2018 IPR012736 Dihydroxyacetone kinase DhaK, subunit 1 AM393_RS07065 ea401b2888d433d6b2e06883f3e24494 356 Gene3D G3DSA:3.30.1180.20 184 356 2.1E-55 T 28-03-2018 AM393_RS07065 ea401b2888d433d6b2e06883f3e24494 356 Gene3D G3DSA:3.40.50.10440 11 183 3.2E-67 T 28-03-2018 AM393_RS07065 ea401b2888d433d6b2e06883f3e24494 356 Pfam PF02733 Dak1 domain 17 351 1.2E-127 T 28-03-2018 IPR004006 DhaK domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 AM393_RS09955 dba33f49c7ae77d1a395557dc002217f 186 Gene3D G3DSA:3.90.79.10 8 184 1.2E-36 T 28-03-2018 AM393_RS09955 dba33f49c7ae77d1a395557dc002217f 186 Pfam PF00293 NUDIX domain 46 157 1.7E-18 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AM393_RS09955 dba33f49c7ae77d1a395557dc002217f 186 ProSitePatterns PS00893 Nudix box signature. 79 100 - T 28-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AM393_RS09955 dba33f49c7ae77d1a395557dc002217f 186 SUPERFAMILY SSF55811 14 178 7.18E-38 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 AM393_RS20545 b71ea111dc83af248b4e617466bd2492 301 Gene3D G3DSA:3.40.190.10 88 177 6.0E-15 T 28-03-2018 AM393_RS20545 b71ea111dc83af248b4e617466bd2492 301 SUPERFAMILY SSF53850 89 298 2.53E-41 T 28-03-2018 AM393_RS20545 b71ea111dc83af248b4e617466bd2492 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 3.5E-16 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS20545 b71ea111dc83af248b4e617466bd2492 301 Gene3D G3DSA:3.40.190.10 178 266 1.1E-20 T 28-03-2018 AM393_RS20545 b71ea111dc83af248b4e617466bd2492 301 Gene3D G3DSA:1.10.10.10 2 84 2.1E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS20545 b71ea111dc83af248b4e617466bd2492 301 SUPERFAMILY SSF46785 3 87 9.33E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS20545 b71ea111dc83af248b4e617466bd2492 301 Pfam PF03466 LysR substrate binding domain 88 294 5.2E-41 T 28-03-2018 IPR005119 LysR, substrate-binding AM393_RS07635 a09cc82f36b13704d408913051f2eec0 260 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 5 258 4.9E-104 T 28-03-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria AM393_RS07635 a09cc82f36b13704d408913051f2eec0 260 Pfam PF02405 Permease MlaE 44 256 2.5E-72 T 28-03-2018 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 AM393_RS04165 506c20a0c6e6288800d971b182489918 342 Pfam PF00419 Fimbrial protein 200 341 1.5E-12 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM393_RS04165 506c20a0c6e6288800d971b182489918 342 SUPERFAMILY SSF49401 210 341 3.08E-9 T 28-03-2018 IPR008966 Adhesion domain AM393_RS04165 506c20a0c6e6288800d971b182489918 342 Gene3D G3DSA:2.60.40.1090 24 172 0.0087 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM393_RS04165 506c20a0c6e6288800d971b182489918 342 Gene3D G3DSA:2.60.40.1090 191 342 3.7E-11 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM393_RS23810 c8bc10013d7260a5b188e5e804b8667d 260 SUPERFAMILY SSF55920 4 257 3.93E-85 T 28-03-2018 IPR000994 Peptidase M24 AM393_RS23810 c8bc10013d7260a5b188e5e804b8667d 260 Hamap MF_01974 Methionine aminopeptidase [map]. 4 252 37.908 T 28-03-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 AM393_RS23810 c8bc10013d7260a5b188e5e804b8667d 260 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 4 251 4.9E-90 T 28-03-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 AM393_RS23810 c8bc10013d7260a5b188e5e804b8667d 260 Pfam PF00557 Metallopeptidase family M24 16 243 6.2E-49 T 28-03-2018 IPR000994 Peptidase M24 AM393_RS23810 c8bc10013d7260a5b188e5e804b8667d 260 PRINTS PR00599 Methionine aminopeptidase-1 signature 163 175 1.4E-17 T 28-03-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 AM393_RS23810 c8bc10013d7260a5b188e5e804b8667d 260 PRINTS PR00599 Methionine aminopeptidase-1 signature 93 109 1.4E-17 T 28-03-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 AM393_RS23810 c8bc10013d7260a5b188e5e804b8667d 260 PRINTS PR00599 Methionine aminopeptidase-1 signature 70 83 1.4E-17 T 28-03-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 AM393_RS23810 c8bc10013d7260a5b188e5e804b8667d 260 PRINTS PR00599 Methionine aminopeptidase-1 signature 194 206 1.4E-17 T 28-03-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 AM393_RS23810 c8bc10013d7260a5b188e5e804b8667d 260 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 169 187 - T 28-03-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 AM393_RS23810 c8bc10013d7260a5b188e5e804b8667d 260 Gene3D G3DSA:3.90.230.10 2 260 2.1E-78 T 28-03-2018 AM393_RS15120 945c72d8d8d83a435f631c980f672476 151 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 32 140 2.2E-51 T 28-03-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 AM393_RS15120 945c72d8d8d83a435f631c980f672476 151 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 114 138 - T 28-03-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site AM393_RS15120 945c72d8d8d83a435f631c980f672476 151 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 28 150 30.454 T 28-03-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 AM393_RS15120 945c72d8d8d83a435f631c980f672476 151 SUPERFAMILY SSF57716 111 149 4.56E-10 T 28-03-2018 AM393_RS15120 945c72d8d8d83a435f631c980f672476 151 SUPERFAMILY SSF109635 9 109 8.37E-38 T 28-03-2018 AM393_RS15120 945c72d8d8d83a435f631c980f672476 151 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 110 143 2.4E-10 T 28-03-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 AM393_RS15120 945c72d8d8d83a435f631c980f672476 151 PRINTS PR00618 DksA/TraR zinc finger signature 126 138 9.9E-5 T 28-03-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria AM393_RS15120 945c72d8d8d83a435f631c980f672476 151 PRINTS PR00618 DksA/TraR zinc finger signature 114 125 9.9E-5 T 28-03-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria AM393_RS08620 c5d76f03eeff26fc77f843cf323fc279 451 Pfam PF00672 HAMP domain 182 225 2.3E-7 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM393_RS08620 c5d76f03eeff26fc77f843cf323fc279 451 Gene3D G3DSA:3.30.565.10 294 443 2.0E-34 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS08620 c5d76f03eeff26fc77f843cf323fc279 451 SMART SM00387 332 440 4.6E-30 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS08620 c5d76f03eeff26fc77f843cf323fc279 451 SUPERFAMILY SSF55874 292 440 5.63E-36 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS08620 c5d76f03eeff26fc77f843cf323fc279 451 Gene3D G3DSA:1.10.287.130 223 289 2.5E-12 T 28-03-2018 AM393_RS08620 c5d76f03eeff26fc77f843cf323fc279 451 SMART SM00304 180 232 5.4E-6 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM393_RS08620 c5d76f03eeff26fc77f843cf323fc279 451 SMART SM00388 233 293 1.5E-11 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM393_RS08620 c5d76f03eeff26fc77f843cf323fc279 451 Pfam PF00512 His Kinase A (phospho-acceptor) domain 235 289 4.9E-10 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM393_RS08620 c5d76f03eeff26fc77f843cf323fc279 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 400 418 1.1E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM393_RS08620 c5d76f03eeff26fc77f843cf323fc279 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 367 381 1.1E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM393_RS08620 c5d76f03eeff26fc77f843cf323fc279 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 395 1.1E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM393_RS08620 c5d76f03eeff26fc77f843cf323fc279 451 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 337 438 2.1E-19 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS08620 c5d76f03eeff26fc77f843cf323fc279 451 SUPERFAMILY SSF47384 217 291 1.02E-11 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM393_RS07075 43293df08511ddfd9b297f57b4987e81 473 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 158 235 2.7E-15 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like AM393_RS07075 43293df08511ddfd9b297f57b4987e81 473 SUPERFAMILY SSF52009 370 471 6.8E-19 T 28-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AM393_RS07075 43293df08511ddfd9b297f57b4987e81 473 PRINTS PR00107 Phosphocarrier protein signature 168 184 9.5E-7 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like AM393_RS07075 43293df08511ddfd9b297f57b4987e81 473 PRINTS PR00107 Phosphocarrier protein signature 208 225 9.5E-7 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like AM393_RS07075 43293df08511ddfd9b297f57b4987e81 473 PRINTS PR00107 Phosphocarrier protein signature 193 208 9.5E-7 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like AM393_RS07075 43293df08511ddfd9b297f57b4987e81 473 Gene3D G3DSA:3.50.30.10 387 473 3.7E-12 T 28-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AM393_RS07075 43293df08511ddfd9b297f57b4987e81 473 TIGRFAM TIGR02364 dha_pts: dihydroxyacetone kinase, phosphotransfer subunit 2 127 2.3E-38 T 28-03-2018 IPR012844 Dihydroxyacetone kinase phosphotransferase subunit, N-terminal domain AM393_RS07075 43293df08511ddfd9b297f57b4987e81 473 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 168 175 - T 28-03-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site AM393_RS07075 43293df08511ddfd9b297f57b4987e81 473 Pfam PF00391 PEP-utilising enzyme, mobile domain 397 465 1.1E-11 T 28-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AM393_RS07075 43293df08511ddfd9b297f57b4987e81 473 Gene3D G3DSA:3.30.1340.10 157 242 4.2E-19 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like AM393_RS07075 43293df08511ddfd9b297f57b4987e81 473 Gene3D G3DSA:3.40.50.510 1 147 4.7E-32 T 28-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 AM393_RS07075 43293df08511ddfd9b297f57b4987e81 473 Pfam PF05524 PEP-utilising enzyme, N-terminal 271 370 5.8E-20 T 28-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 AM393_RS07075 43293df08511ddfd9b297f57b4987e81 473 Pfam PF03610 PTS system fructose IIA component 4 120 1.2E-24 T 28-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 AM393_RS07075 43293df08511ddfd9b297f57b4987e81 473 SUPERFAMILY SSF53062 1 128 2.22E-28 T 28-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 AM393_RS07075 43293df08511ddfd9b297f57b4987e81 473 SUPERFAMILY SSF55594 159 242 4.58E-19 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like AM393_RS07075 43293df08511ddfd9b297f57b4987e81 473 Gene3D G3DSA:1.10.274.10 269 386 1.0E-28 T 28-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 AM393_RS07075 43293df08511ddfd9b297f57b4987e81 473 Pfam PF00381 PTS HPr component phosphorylation site 159 236 2.8E-16 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like AM393_RS07075 43293df08511ddfd9b297f57b4987e81 473 SUPERFAMILY SSF47831 273 387 2.62E-29 T 28-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 AM393_RS10660 efac678eb14fe1475518bebc58683a16 328 SUPERFAMILY SSF56112 6 327 3.79E-85 T 28-03-2018 IPR011009 Protein kinase-like domain AM393_RS10660 efac678eb14fe1475518bebc58683a16 328 Gene3D G3DSA:3.30.200.20 5 107 1.3E-18 T 28-03-2018 AM393_RS10660 efac678eb14fe1475518bebc58683a16 328 Hamap MF_01497 Stress response kinase A [srkA]. 4 318 45.299 T 28-03-2018 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 AM393_RS10660 efac678eb14fe1475518bebc58683a16 328 Pfam PF01636 Phosphotransferase enzyme family 32 254 1.9E-43 T 28-03-2018 IPR002575 Aminoglycoside phosphotransferase AM393_RS10660 efac678eb14fe1475518bebc58683a16 328 Gene3D G3DSA:3.90.1200.10 111 322 1.6E-20 T 28-03-2018 AM393_RS10195 217f63f12a87a4f2ef7a690155cdd44f 197 ProSitePatterns PS00622 LuxR-type HTH domain signature. 152 179 - T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS10195 217f63f12a87a4f2ef7a690155cdd44f 197 Pfam PF00196 Bacterial regulatory proteins, luxR family 137 190 3.6E-22 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS10195 217f63f12a87a4f2ef7a690155cdd44f 197 SMART SM00448 2 112 2.7E-27 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM393_RS10195 217f63f12a87a4f2ef7a690155cdd44f 197 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 152 168 2.2E-13 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS10195 217f63f12a87a4f2ef7a690155cdd44f 197 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 138 152 2.2E-13 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS10195 217f63f12a87a4f2ef7a690155cdd44f 197 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 180 2.2E-13 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS10195 217f63f12a87a4f2ef7a690155cdd44f 197 Gene3D G3DSA:3.40.50.2300 1 123 2.9E-27 T 28-03-2018 AM393_RS10195 217f63f12a87a4f2ef7a690155cdd44f 197 Gene3D G3DSA:1.10.10.10 124 195 1.2E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS10195 217f63f12a87a4f2ef7a690155cdd44f 197 SUPERFAMILY SSF46894 128 193 7.82E-20 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM393_RS10195 217f63f12a87a4f2ef7a690155cdd44f 197 SMART SM00421 135 192 7.4E-25 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS10195 217f63f12a87a4f2ef7a690155cdd44f 197 Pfam PF00072 Response regulator receiver domain 4 113 1.0E-24 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM393_RS10195 217f63f12a87a4f2ef7a690155cdd44f 197 SUPERFAMILY SSF52172 1 125 7.83E-27 T 28-03-2018 IPR011006 CheY-like superfamily AM393_RS05245 55e825ef24a87c086f53c5db9a746ff7 270 SUPERFAMILY SSF143414 185 254 1.57E-11 T 28-03-2018 AM393_RS05245 55e825ef24a87c086f53c5db9a746ff7 270 TIGRFAM TIGR04501 microcomp_PduB: microcompartment protein PduB 46 270 5.9E-120 T 28-03-2018 IPR030984 Microcompartment protein PduB GO:0005198 AM393_RS05245 55e825ef24a87c086f53c5db9a746ff7 270 SMART SM00877 79 161 6.2E-11 T 28-03-2018 IPR000249 Microcompartment protein, bacteria AM393_RS05245 55e825ef24a87c086f53c5db9a746ff7 270 SMART SM00877 185 262 4.1E-15 T 28-03-2018 IPR000249 Microcompartment protein, bacteria AM393_RS05245 55e825ef24a87c086f53c5db9a746ff7 270 SUPERFAMILY SSF143414 79 156 8.76E-9 T 28-03-2018 AM393_RS05245 55e825ef24a87c086f53c5db9a746ff7 270 PIRSF PIRSF012290 38 270 2.6E-108 T 28-03-2018 IPR009193 Polyhedral organelle shell protein, EutL/PduB type GO:0009605 AM393_RS05245 55e825ef24a87c086f53c5db9a746ff7 270 Pfam PF00936 BMC domain 186 256 4.8E-14 T 28-03-2018 IPR000249 Microcompartment protein, bacteria AM393_RS05245 55e825ef24a87c086f53c5db9a746ff7 270 Pfam PF00936 BMC domain 80 148 1.0E-11 T 28-03-2018 IPR000249 Microcompartment protein, bacteria AM393_RS13905 648c91b19ec86c0bf8d2d7b5889ca400 267 Gene3D G3DSA:3.90.850.10 1 267 9.5E-46 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AM393_RS13905 648c91b19ec86c0bf8d2d7b5889ca400 267 TIGRFAM TIGR02312 HpaH: 2-oxo-hepta-3-ene-1,7-dioic acid hydratase 1 267 1.4E-140 T 28-03-2018 IPR012690 2-oxo-hepta-4-ene-1,7-dioic acid hydratase GO:0018817|GO:0019439 AM393_RS13905 648c91b19ec86c0bf8d2d7b5889ca400 267 SUPERFAMILY SSF56529 2 267 7.46E-77 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AM393_RS13905 648c91b19ec86c0bf8d2d7b5889ca400 267 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 76 265 1.1E-6 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AM393_RS25885 5b10424c816e58c06bb1c61a4b326908 178 Gene3D G3DSA:3.40.630.30 1 178 3.4E-26 T 28-03-2018 AM393_RS25885 5b10424c816e58c06bb1c61a4b326908 178 Pfam PF13302 Acetyltransferase (GNAT) domain 8 140 7.6E-18 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AM393_RS25885 5b10424c816e58c06bb1c61a4b326908 178 SUPERFAMILY SSF55729 1 172 2.86E-32 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM393_RS19970 f6853a4a17be576c1c22a756351f2d1a 362 Gene3D G3DSA:3.40.640.10 16 259 4.0E-23 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM393_RS19970 f6853a4a17be576c1c22a756351f2d1a 362 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 2 361 50.767 T 28-03-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 AM393_RS19970 f6853a4a17be576c1c22a756351f2d1a 362 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 189 208 - T 28-03-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site AM393_RS19970 f6853a4a17be576c1c22a756351f2d1a 362 SUPERFAMILY SSF53383 3 362 5.24E-112 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM393_RS19970 f6853a4a17be576c1c22a756351f2d1a 362 Gene3D G3DSA:3.90.1150.10 260 360 6.5E-36 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM393_RS19970 f6853a4a17be576c1c22a756351f2d1a 362 PIRSF PIRSF000525 1 362 1.3E-145 T 28-03-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 AM393_RS19970 f6853a4a17be576c1c22a756351f2d1a 362 Pfam PF00266 Aminotransferase class-V 4 350 4.4E-70 T 28-03-2018 IPR000192 Aminotransferase class V domain AM393_RS19970 f6853a4a17be576c1c22a756351f2d1a 362 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 4 361 1.1E-152 T 28-03-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 AM393_RS18680 bb98d5b877a4eec5a07003ca1003f15d 408 Pfam PF00364 Biotin-requiring enzyme 5 76 1.8E-16 T 28-03-2018 IPR000089 Biotin/lipoyl attachment AM393_RS18680 bb98d5b877a4eec5a07003ca1003f15d 408 Pfam PF02817 e3 binding domain 114 147 1.0E-12 T 28-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 AM393_RS18680 bb98d5b877a4eec5a07003ca1003f15d 408 Gene3D G3DSA:3.30.559.10 161 406 3.4E-90 T 28-03-2018 AM393_RS18680 bb98d5b877a4eec5a07003ca1003f15d 408 Gene3D G3DSA:4.10.320.10 118 159 1.5E-16 T 28-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 AM393_RS18680 bb98d5b877a4eec5a07003ca1003f15d 408 SUPERFAMILY SSF52777 178 407 1.47E-89 T 28-03-2018 AM393_RS18680 bb98d5b877a4eec5a07003ca1003f15d 408 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 4 408 3.3E-193 T 28-03-2018 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|Reactome: R-HSA-389661|Reactome: R-HSA-71064|Reactome: R-HSA-71403 AM393_RS18680 bb98d5b877a4eec5a07003ca1003f15d 408 SUPERFAMILY SSF51230 2 95 1.23E-23 T 28-03-2018 IPR011053 Single hybrid motif AM393_RS18680 bb98d5b877a4eec5a07003ca1003f15d 408 Gene3D G3DSA:3.90.1170.30 1 46 6.9E-14 T 28-03-2018 AM393_RS18680 bb98d5b877a4eec5a07003ca1003f15d 408 Gene3D G3DSA:3.90.1170.30 47 117 8.7E-5 T 28-03-2018 AM393_RS18680 bb98d5b877a4eec5a07003ca1003f15d 408 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 178 406 9.0E-81 T 28-03-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 AM393_RS18680 bb98d5b877a4eec5a07003ca1003f15d 408 SUPERFAMILY SSF47005 106 151 3.01E-11 T 28-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 AM393_RS18680 bb98d5b877a4eec5a07003ca1003f15d 408 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 28 57 - T 28-03-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 AM393_RS26830 927cf034b6c32dc05cbff20fe4ea6153 360 Pfam PF03462 PCRF domain 14 203 8.3E-76 T 28-03-2018 IPR005139 Peptide chain release factor GO:0006415 AM393_RS26830 927cf034b6c32dc05cbff20fe4ea6153 360 SMART SM00937 63 178 1.4E-71 T 28-03-2018 IPR005139 Peptide chain release factor GO:0006415 AM393_RS26830 927cf034b6c32dc05cbff20fe4ea6153 360 SUPERFAMILY SSF75620 12 353 3.53E-136 T 28-03-2018 AM393_RS26830 927cf034b6c32dc05cbff20fe4ea6153 360 Gene3D G3DSA:1.20.58.410 2 100 1.1E-18 T 28-03-2018 AM393_RS26830 927cf034b6c32dc05cbff20fe4ea6153 360 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 358 1.3E-174 T 28-03-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 AM393_RS26830 927cf034b6c32dc05cbff20fe4ea6153 360 Pfam PF00472 RF-1 domain 216 321 2.6E-40 T 28-03-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AM393_RS26830 927cf034b6c32dc05cbff20fe4ea6153 360 Gene3D G3DSA:3.30.160.20 209 291 1.3E-32 T 28-03-2018 AM393_RS26830 927cf034b6c32dc05cbff20fe4ea6153 360 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 357 41.021 T 28-03-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 AM393_RS26830 927cf034b6c32dc05cbff20fe4ea6153 360 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 228 244 - T 28-03-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AM393_RS10960 d599cd1982d0031ea6e9a7e3947a1385 320 ProSitePatterns PS00433 Phosphofructokinase signature. 244 262 - T 28-03-2018 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AM393_RS10960 d599cd1982d0031ea6e9a7e3947a1385 320 TIGRFAM TIGR02482 PFKA_ATP: 6-phosphofructokinase 4 301 5.7E-126 T 28-03-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 AM393_RS10960 d599cd1982d0031ea6e9a7e3947a1385 320 PIRSF PIRSF000532 1 320 5.4E-132 T 28-03-2018 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 AM393_RS10960 d599cd1982d0031ea6e9a7e3947a1385 320 SUPERFAMILY SSF53784 3 311 3.14E-113 T 28-03-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AM393_RS10960 d599cd1982d0031ea6e9a7e3947a1385 320 Pfam PF00365 Phosphofructokinase 4 276 4.2E-107 T 28-03-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AM393_RS10960 d599cd1982d0031ea6e9a7e3947a1385 320 Hamap MF_00339 ATP-dependent 6-phosphofructokinase [pfkA]. 2 320 46.889 T 28-03-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 AM393_RS10960 d599cd1982d0031ea6e9a7e3947a1385 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 7 26 5.2E-83 T 28-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AM393_RS10960 d599cd1982d0031ea6e9a7e3947a1385 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 32 45 5.2E-83 T 28-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AM393_RS10960 d599cd1982d0031ea6e9a7e3947a1385 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 139 157 5.2E-83 T 28-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AM393_RS10960 d599cd1982d0031ea6e9a7e3947a1385 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 213 225 5.2E-83 T 28-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AM393_RS10960 d599cd1982d0031ea6e9a7e3947a1385 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 177 194 5.2E-83 T 28-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AM393_RS10960 d599cd1982d0031ea6e9a7e3947a1385 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 240 262 5.2E-83 T 28-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AM393_RS10960 d599cd1982d0031ea6e9a7e3947a1385 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 159 175 5.2E-83 T 28-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AM393_RS10960 d599cd1982d0031ea6e9a7e3947a1385 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 94 110 5.2E-83 T 28-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AM393_RS10960 d599cd1982d0031ea6e9a7e3947a1385 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 121 138 5.2E-83 T 28-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AM393_RS10960 d599cd1982d0031ea6e9a7e3947a1385 320 Gene3D G3DSA:3.40.50.450 1 212 3.8E-82 T 28-03-2018 AM393_RS10960 d599cd1982d0031ea6e9a7e3947a1385 320 Gene3D G3DSA:3.40.50.450 213 307 1.2E-8 T 28-03-2018 AM393_RS08535 8364f65b8bd7bd081d81b2dbf9a17c20 275 SUPERFAMILY SSF53335 5 268 4.53E-77 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM393_RS08535 8364f65b8bd7bd081d81b2dbf9a17c20 275 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 10 248 5.1E-70 T 28-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AM393_RS08535 8364f65b8bd7bd081d81b2dbf9a17c20 275 TIGRFAM TIGR00571 dam: DNA adenine methylase 5 268 8.7E-98 T 28-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AM393_RS08535 8364f65b8bd7bd081d81b2dbf9a17c20 275 Gene3D G3DSA:3.40.50.150 152 269 7.2E-18 T 28-03-2018 AM393_RS08535 8364f65b8bd7bd081d81b2dbf9a17c20 275 PIRSF PIRSF000398 1 275 1.8E-70 T 28-03-2018 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 AM393_RS08535 8364f65b8bd7bd081d81b2dbf9a17c20 275 Gene3D G3DSA:1.10.1020.10 57 151 1.0E-32 T 28-03-2018 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 AM393_RS08535 8364f65b8bd7bd081d81b2dbf9a17c20 275 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 10 26 4.9E-18 T 28-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AM393_RS08535 8364f65b8bd7bd081d81b2dbf9a17c20 275 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 175 187 4.9E-18 T 28-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AM393_RS08535 8364f65b8bd7bd081d81b2dbf9a17c20 275 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 50 63 4.9E-18 T 28-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AM393_RS08535 8364f65b8bd7bd081d81b2dbf9a17c20 275 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 31 45 4.9E-18 T 28-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AM393_RS08535 8364f65b8bd7bd081d81b2dbf9a17c20 275 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 178 184 - T 28-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AM393_RS14025 7b82f8cf787b56115118bb9c960ef000 481 SUPERFAMILY SSF48179 273 480 5.1E-48 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AM393_RS14025 7b82f8cf787b56115118bb9c960ef000 481 Gene3D G3DSA:3.40.50.720 1 267 4.2E-61 T 28-03-2018 AM393_RS14025 7b82f8cf787b56115118bb9c960ef000 481 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 204 455 1.6E-65 T 28-03-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 AM393_RS14025 7b82f8cf787b56115118bb9c960ef000 481 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 17 172 5.0E-32 T 28-03-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 AM393_RS14025 7b82f8cf787b56115118bb9c960ef000 481 Gene3D G3DSA:1.10.1040.10 272 481 1.3E-60 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AM393_RS14025 7b82f8cf787b56115118bb9c960ef000 481 SUPERFAMILY SSF51735 2 257 4.33E-66 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS25715 c281b4e6d707b42a2ccb097facbcb1b5 510 Pfam PF07690 Major Facilitator Superfamily 20 410 4.6E-41 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS25715 c281b4e6d707b42a2ccb097facbcb1b5 510 PRINTS PR01036 Tetracycline resistance protein TetB signature 140 164 2.8E-6 T 28-03-2018 AM393_RS25715 c281b4e6d707b42a2ccb097facbcb1b5 510 PRINTS PR01036 Tetracycline resistance protein TetB signature 402 421 2.8E-6 T 28-03-2018 AM393_RS25715 c281b4e6d707b42a2ccb097facbcb1b5 510 PRINTS PR01036 Tetracycline resistance protein TetB signature 79 101 2.8E-6 T 28-03-2018 AM393_RS25715 c281b4e6d707b42a2ccb097facbcb1b5 510 SUPERFAMILY SSF103473 251 421 5.62E-49 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS25715 c281b4e6d707b42a2ccb097facbcb1b5 510 SUPERFAMILY SSF103473 472 499 5.62E-49 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS25715 c281b4e6d707b42a2ccb097facbcb1b5 510 SUPERFAMILY SSF103473 18 205 5.62E-49 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS25715 c281b4e6d707b42a2ccb097facbcb1b5 510 Gene3D G3DSA:1.20.1250.20 254 507 5.1E-20 T 28-03-2018 AM393_RS25715 c281b4e6d707b42a2ccb097facbcb1b5 510 Gene3D G3DSA:1.20.1250.20 9 203 2.4E-26 T 28-03-2018 AM393_RS17330 8029f8b6846ddd3a8fe465a736b10848 811 Pfam PF13953 PapC C-terminal domain 726 787 9.8E-18 T 28-03-2018 IPR025949 PapC-like, C-terminal domain AM393_RS17330 8029f8b6846ddd3a8fe465a736b10848 811 Pfam PF13954 PapC N-terminal domain 27 161 7.9E-27 T 28-03-2018 IPR025885 PapC, N-terminal domain GO:0005515 AM393_RS17330 8029f8b6846ddd3a8fe465a736b10848 811 Pfam PF00577 Outer membrane usher protein 179 715 3.7E-128 T 28-03-2018 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 AM393_RS17330 8029f8b6846ddd3a8fe465a736b10848 811 Gene3D G3DSA:2.60.40.1310 207 327 8.4E-4 T 28-03-2018 AM393_RS17330 8029f8b6846ddd3a8fe465a736b10848 811 SUPERFAMILY SSF141729 25 139 1.26E-17 T 28-03-2018 AM393_RS27915 3445026d2cff665de63500b4fc4355be 1094 Gene3D G3DSA:3.40.50.300 138 504 4.6E-17 T 28-03-2018 AM393_RS27915 3445026d2cff665de63500b4fc4355be 1094 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 9 225 2.8E-43 T 28-03-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 AM393_RS27915 3445026d2cff665de63500b4fc4355be 1094 SMART SM00487 312 522 1.8E-8 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AM393_RS27915 3445026d2cff665de63500b4fc4355be 1094 TIGRFAM TIGR00348 hsdR: type I site-specific deoxyribonuclease, HsdR family 71 740 2.0E-138 T 28-03-2018 IPR004473 Restriction endonuclease, type I, HsdR GO:0003677|GO:0005524|GO:0009035|GO:0009307 AM393_RS27915 3445026d2cff665de63500b4fc4355be 1094 SUPERFAMILY SSF52540 281 539 6.21E-23 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS27915 3445026d2cff665de63500b4fc4355be 1094 Pfam PF04851 Type III restriction enzyme, res subunit 315 485 2.3E-18 T 28-03-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 AM393_RS03910 c7ab5efb5a8712d208593211b56df0ef 326 SUPERFAMILY SSF55120 77 322 2.06E-77 T 28-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM393_RS03910 c7ab5efb5a8712d208593211b56df0ef 326 Pfam PF01479 S4 domain 18 65 3.6E-10 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AM393_RS03910 c7ab5efb5a8712d208593211b56df0ef 326 Pfam PF00849 RNA pseudouridylate synthase 92 242 3.8E-30 T 28-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM393_RS03910 c7ab5efb5a8712d208593211b56df0ef 326 SUPERFAMILY SSF55174 17 70 9.76E-11 T 28-03-2018 AM393_RS03910 c7ab5efb5a8712d208593211b56df0ef 326 Gene3D G3DSA:3.30.2350.10 83 316 3.2E-67 T 28-03-2018 AM393_RS03910 c7ab5efb5a8712d208593211b56df0ef 326 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 135 149 - T 28-03-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM393_RS03910 c7ab5efb5a8712d208593211b56df0ef 326 SMART SM00363 18 79 8.4E-10 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AM393_RS03910 c7ab5efb5a8712d208593211b56df0ef 326 Gene3D G3DSA:3.10.290.10 2 76 7.5E-22 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AM393_RS03910 c7ab5efb5a8712d208593211b56df0ef 326 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 13 313 8.0E-109 T 28-03-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM393_RS23995 405bdbb7902d151c344423d55998ed58 336 SUPERFAMILY SSF55347 152 315 3.27E-67 T 28-03-2018 AM393_RS23995 405bdbb7902d151c344423d55998ed58 336 SUPERFAMILY SSF51735 2 179 8.24E-63 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS23995 405bdbb7902d151c344423d55998ed58 336 PIRSF PIRSF000149 1 336 2.4E-131 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM393_RS23995 405bdbb7902d151c344423d55998ed58 336 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 3 326 1.7E-126 T 28-03-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM393_RS23995 405bdbb7902d151c344423d55998ed58 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 109 122 1.1E-33 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM393_RS23995 405bdbb7902d151c344423d55998ed58 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 173 189 1.1E-33 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM393_RS23995 405bdbb7902d151c344423d55998ed58 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 229 246 1.1E-33 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM393_RS23995 405bdbb7902d151c344423d55998ed58 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 146 164 1.1E-33 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM393_RS23995 405bdbb7902d151c344423d55998ed58 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 270 285 1.1E-33 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM393_RS23995 405bdbb7902d151c344423d55998ed58 336 Gene3D G3DSA:3.40.50.720 1 161 3.4E-73 T 28-03-2018 AM393_RS23995 405bdbb7902d151c344423d55998ed58 336 SMART SM00846 2 152 2.1E-93 T 28-03-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM393_RS23995 405bdbb7902d151c344423d55998ed58 336 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 2 101 7.1E-39 T 28-03-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM393_RS23995 405bdbb7902d151c344423d55998ed58 336 Gene3D G3DSA:3.30.360.10 162 316 3.7E-64 T 28-03-2018 AM393_RS23995 405bdbb7902d151c344423d55998ed58 336 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 157 314 5.4E-62 T 28-03-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM393_RS02510 ad013be7dd8db3c5324f669585674884 761 Gene3D G3DSA:3.20.70.20 122 739 1.7E-148 T 28-03-2018 AM393_RS02510 ad013be7dd8db3c5324f669585674884 761 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 145 735 4.4E-178 T 28-03-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM393_RS02510 ad013be7dd8db3c5324f669585674884 761 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 599 621 - T 28-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM393_RS02510 ad013be7dd8db3c5324f669585674884 761 SUPERFAMILY SSF48168 10 221 2.22E-73 T 28-03-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM393_RS02510 ad013be7dd8db3c5324f669585674884 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 473 496 2.1E-38 T 28-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM393_RS02510 ad013be7dd8db3c5324f669585674884 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 610 637 2.1E-38 T 28-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM393_RS02510 ad013be7dd8db3c5324f669585674884 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 511 533 2.1E-38 T 28-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM393_RS02510 ad013be7dd8db3c5324f669585674884 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 433 444 2.1E-38 T 28-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM393_RS02510 ad013be7dd8db3c5324f669585674884 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 539 562 2.1E-38 T 28-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM393_RS02510 ad013be7dd8db3c5324f669585674884 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 298 317 2.1E-38 T 28-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM393_RS02510 ad013be7dd8db3c5324f669585674884 761 Pfam PF03477 ATP cone domain 6 92 1.4E-15 T 28-03-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 AM393_RS02510 ad013be7dd8db3c5324f669585674884 761 Pfam PF02867 Ribonucleotide reductase, barrel domain 223 731 7.7E-120 T 28-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM393_RS02510 ad013be7dd8db3c5324f669585674884 761 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 141 219 7.0E-13 T 28-03-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM393_RS02510 ad013be7dd8db3c5324f669585674884 761 SUPERFAMILY SSF51998 222 740 6.71E-169 T 28-03-2018 AM393_RS07135 827d3e7b8a09baec22ea732615cad5a7 323 Gene3D G3DSA:3.40.50.1360 73 321 6.2E-30 T 28-03-2018 AM393_RS07135 827d3e7b8a09baec22ea732615cad5a7 323 SUPERFAMILY SSF100950 74 319 6.98E-56 T 28-03-2018 AM393_RS07135 827d3e7b8a09baec22ea732615cad5a7 323 Gene3D G3DSA:1.10.10.10 5 67 1.3E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS07135 827d3e7b8a09baec22ea732615cad5a7 323 Pfam PF04198 Putative sugar-binding domain 71 320 1.3E-64 T 28-03-2018 IPR007324 Sugar-binding domain, putative GO:0030246 AM393_RS14390 cf3b370372ce462b0bce28ac9c808433 188 ProSitePatterns PS01114 GPR1/FUN34/yaaH family signature. 8 17 - T 28-03-2018 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 AM393_RS14390 cf3b370372ce462b0bce28ac9c808433 188 Pfam PF01184 GPR1/FUN34/yaaH family 4 177 1.3E-42 T 28-03-2018 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 AM393_RS21930 822dc50ac7a48154d9bd46c0edb8a8a4 294 Gene3D G3DSA:3.40.190.10 92 179 2.1E-11 T 28-03-2018 AM393_RS21930 822dc50ac7a48154d9bd46c0edb8a8a4 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 2.8E-23 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS21930 822dc50ac7a48154d9bd46c0edb8a8a4 294 Pfam PF03466 LysR substrate binding domain 91 293 6.2E-36 T 28-03-2018 IPR005119 LysR, substrate-binding AM393_RS21930 822dc50ac7a48154d9bd46c0edb8a8a4 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 6.5E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS21930 822dc50ac7a48154d9bd46c0edb8a8a4 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 6.5E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS21930 822dc50ac7a48154d9bd46c0edb8a8a4 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 6.5E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS21930 822dc50ac7a48154d9bd46c0edb8a8a4 294 SUPERFAMILY SSF46785 6 90 4.44E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS21930 822dc50ac7a48154d9bd46c0edb8a8a4 294 Gene3D G3DSA:3.40.190.10 180 268 2.3E-23 T 28-03-2018 AM393_RS21930 822dc50ac7a48154d9bd46c0edb8a8a4 294 Gene3D G3DSA:1.10.10.10 1 91 6.8E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS21930 822dc50ac7a48154d9bd46c0edb8a8a4 294 SUPERFAMILY SSF53850 92 293 4.71E-39 T 28-03-2018 AM393_RS02780 65c8d0689cba293e144d0ce166f468cc 297 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 3 292 1.2E-106 T 28-03-2018 IPR010099 Epimerase family protein SDR39U1 AM393_RS02780 65c8d0689cba293e144d0ce166f468cc 297 Pfam PF08338 Domain of unknown function (DUF1731) 249 295 2.3E-19 T 28-03-2018 IPR013549 Domain of unknown function DUF1731 AM393_RS02780 65c8d0689cba293e144d0ce166f468cc 297 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 214 1.1E-21 T 28-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 AM393_RS02780 65c8d0689cba293e144d0ce166f468cc 297 Gene3D G3DSA:3.40.50.720 1 297 7.5E-38 T 28-03-2018 AM393_RS02780 65c8d0689cba293e144d0ce166f468cc 297 SUPERFAMILY SSF51735 1 296 3.17E-45 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS15580 55e2e621a737ef36db43b3c33ba1d9b2 256 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 137 157 - T 28-03-2018 IPR001110 Uncharacterised protein family UPF0012, conserved site AM393_RS15580 55e2e621a737ef36db43b3c33ba1d9b2 256 Pfam PF00795 Carbon-nitrogen hydrolase 6 241 8.7E-32 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AM393_RS15580 55e2e621a737ef36db43b3c33ba1d9b2 256 Gene3D G3DSA:3.60.110.10 2 253 3.1E-56 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AM393_RS15580 55e2e621a737ef36db43b3c33ba1d9b2 256 SUPERFAMILY SSF56317 4 249 2.88E-62 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AM393_RS28485 b066c66c45801debda198fcc16f4d9cd 185 SUPERFAMILY SSF53041 1 138 9.16E-43 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AM393_RS28485 b066c66c45801debda198fcc16f4d9cd 185 ProSitePatterns PS00397 Site-specific recombinases active site. 6 14 - T 28-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 AM393_RS28485 b066c66c45801debda198fcc16f4d9cd 185 Gene3D G3DSA:1.10.10.60 129 181 1.9E-10 T 28-03-2018 AM393_RS28485 b066c66c45801debda198fcc16f4d9cd 185 Gene3D G3DSA:1.20.5.40 108 128 5.4E-13 T 28-03-2018 AM393_RS28485 b066c66c45801debda198fcc16f4d9cd 185 ProSitePatterns PS00398 Site-specific recombinases signature 2. 58 70 - T 28-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 AM393_RS28485 b066c66c45801debda198fcc16f4d9cd 185 SUPERFAMILY SSF46689 141 181 2.62E-8 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS28485 b066c66c45801debda198fcc16f4d9cd 185 Pfam PF00239 Resolvase, N terminal domain 3 137 8.0E-41 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AM393_RS28485 b066c66c45801debda198fcc16f4d9cd 185 SMART SM00857 3 139 6.3E-51 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AM393_RS28485 b066c66c45801debda198fcc16f4d9cd 185 Gene3D G3DSA:3.40.50.1390 1 107 1.1E-36 T 28-03-2018 AM393_RS28485 b066c66c45801debda198fcc16f4d9cd 185 Pfam PF02796 Helix-turn-helix domain of resolvase 141 181 8.5E-11 T 28-03-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 AM393_RS26845 0278a08861d72a7a74c355cc203a2939 283 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 2 281 9.1E-113 T 28-03-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 AM393_RS26845 0278a08861d72a7a74c355cc203a2939 283 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 3 275 32.358 T 28-03-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 AM393_RS26845 0278a08861d72a7a74c355cc203a2939 283 SUPERFAMILY SSF55060 165 280 1.37E-34 T 28-03-2018 IPR013750 GHMP kinase, C-terminal domain AM393_RS26845 0278a08861d72a7a74c355cc203a2939 283 Gene3D G3DSA:3.30.230.10 3 164 1.0E-46 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AM393_RS26845 0278a08861d72a7a74c355cc203a2939 283 Pfam PF08544 GHMP kinases C terminal 210 259 1.8E-5 T 28-03-2018 IPR013750 GHMP kinase, C-terminal domain AM393_RS26845 0278a08861d72a7a74c355cc203a2939 283 Pfam PF00288 GHMP kinases N terminal domain 91 148 5.4E-11 T 28-03-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 AM393_RS26845 0278a08861d72a7a74c355cc203a2939 283 Gene3D G3DSA:3.30.70.890 165 283 3.9E-24 T 28-03-2018 IPR013750 GHMP kinase, C-terminal domain AM393_RS26845 0278a08861d72a7a74c355cc203a2939 283 SUPERFAMILY SSF54211 1 162 9.11E-50 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM393_RS26845 0278a08861d72a7a74c355cc203a2939 283 PIRSF PIRSF010376 1 282 1.5E-84 T 28-03-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 AM393_RS19475 912f967da4a1fd878689d3b6f0501d78 75 SUPERFAMILY SSF57716 34 71 4.56E-9 T 28-03-2018 AM393_RS19475 912f967da4a1fd878689d3b6f0501d78 75 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 32 64 2.3E-11 T 28-03-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 AM393_RS19475 912f967da4a1fd878689d3b6f0501d78 75 TIGRFAM TIGR02419 C4_traR_proteo: phage/conjugal plasmid C-4 type zinc finger protein, TraR family 3 64 1.4E-18 T 28-03-2018 IPR012783 Zinc finger, C4 DksA/TraR-type AM393_RS27625 29ce1963fc57e2f5d8f47a331dae69d3 144 Pfam PF06519 TolA C-terminal 59 142 2.7E-24 T 28-03-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 AM393_RS27625 29ce1963fc57e2f5d8f47a331dae69d3 144 Gene3D G3DSA:3.30.1150.10 67 139 3.6E-16 T 28-03-2018 AM393_RS27625 29ce1963fc57e2f5d8f47a331dae69d3 144 TIGRFAM TIGR02794 tolA_full: protein TolA 58 143 7.1E-22 T 28-03-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 AM393_RS27625 29ce1963fc57e2f5d8f47a331dae69d3 144 SUPERFAMILY SSF74653 62 144 7.26E-16 T 28-03-2018 AM393_RS00405 23ebff2e422f810e37f25ba194734708 323 Pfam PF03610 PTS system fructose IIA component 5 116 1.2E-35 T 28-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 AM393_RS00405 23ebff2e422f810e37f25ba194734708 323 TIGRFAM TIGR00824 EIIA-man: PTS system, mannose/fructose/sorbose family, IIA component 2 117 2.1E-51 T 28-03-2018 IPR013789 Phosphotransferase system, mannose family IIA component GO:0005737|GO:0008643|GO:0016773 AM393_RS00405 23ebff2e422f810e37f25ba194734708 323 Gene3D G3DSA:3.40.35.10 163 319 2.1E-59 T 28-03-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 AM393_RS00405 23ebff2e422f810e37f25ba194734708 323 Gene3D G3DSA:3.40.50.510 2 136 6.6E-37 T 28-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 AM393_RS00405 23ebff2e422f810e37f25ba194734708 323 TIGRFAM TIGR00854 pts-sorbose: PTS system, mannose/fructose/sorbose family, IIB component 164 311 7.8E-55 T 28-03-2018 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup GO:0005737|GO:0008982|GO:0009401 AM393_RS00405 23ebff2e422f810e37f25ba194734708 323 Pfam PF03830 PTS system sorbose subfamily IIB component 164 310 6.4E-55 T 28-03-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 AM393_RS00405 23ebff2e422f810e37f25ba194734708 323 SUPERFAMILY SSF53062 3 128 1.7E-37 T 28-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 AM393_RS00405 23ebff2e422f810e37f25ba194734708 323 SUPERFAMILY SSF52728 162 321 6.8E-54 T 28-03-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 AM393_RS02915 cc1039e1c8cec8a899dab82c50f2224d 183 Hamap MF_01042 UPF0115 protein YfcN [yfcN]. 1 174 42.167 T 28-03-2018 IPR022990 Uncharacterised protein family UPF0115 AM393_RS02915 cc1039e1c8cec8a899dab82c50f2224d 183 SMART SM00463 95 173 4.7E-22 T 28-03-2018 IPR002625 Smr domain AM393_RS02915 cc1039e1c8cec8a899dab82c50f2224d 183 Pfam PF01713 Smr domain 98 171 2.2E-17 T 28-03-2018 IPR002625 Smr domain AM393_RS02915 cc1039e1c8cec8a899dab82c50f2224d 183 SUPERFAMILY SSF160443 96 150 7.98E-10 T 28-03-2018 IPR002625 Smr domain AM393_RS17725 8ca241e50eb1821274708aabcca93a09 217 SUPERFAMILY SSF55469 1 216 2.88E-61 T 28-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AM393_RS17725 8ca241e50eb1821274708aabcca93a09 217 Pfam PF00881 Nitroreductase family 8 193 3.7E-31 T 28-03-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 AM393_RS17725 8ca241e50eb1821274708aabcca93a09 217 Gene3D G3DSA:3.40.109.10 1 217 7.3E-37 T 28-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AM393_RS18300 0793df3cbf08e7c6840f86e733ccc5cc 399 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 68 79 4.7E-17 T 28-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AM393_RS18300 0793df3cbf08e7c6840f86e733ccc5cc 399 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 154 167 4.7E-17 T 28-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AM393_RS18300 0793df3cbf08e7c6840f86e733ccc5cc 399 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 127 144 4.7E-17 T 28-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AM393_RS18300 0793df3cbf08e7c6840f86e733ccc5cc 399 Gene3D G3DSA:2.60.410.10 307 378 2.4E-17 T 28-03-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AM393_RS18300 0793df3cbf08e7c6840f86e733ccc5cc 399 Gene3D G3DSA:3.40.710.10 12 306 1.3E-48 T 28-03-2018 AM393_RS18300 0793df3cbf08e7c6840f86e733ccc5cc 399 SMART SM00936 288 379 8.2E-33 T 28-03-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AM393_RS18300 0793df3cbf08e7c6840f86e733ccc5cc 399 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 34 268 5.8E-102 T 28-03-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 AM393_RS18300 0793df3cbf08e7c6840f86e733ccc5cc 399 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 288 379 2.3E-24 T 28-03-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AM393_RS18300 0793df3cbf08e7c6840f86e733ccc5cc 399 SUPERFAMILY SSF56601 8 288 1.54E-76 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AM393_RS18300 0793df3cbf08e7c6840f86e733ccc5cc 399 SUPERFAMILY SSF69189 288 381 5.89E-24 T 28-03-2018 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AM393_RS25410 2a9cfb242541eefb12caa6f9f32d5c22 206 TIGRFAM TIGR01947 rnfG: electron transport complex, RnfABCDGE type, G subunit 9 192 9.1E-66 T 28-03-2018 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 AM393_RS25410 2a9cfb242541eefb12caa6f9f32d5c22 206 Pfam PF04205 FMN-binding domain 99 187 1.2E-18 T 28-03-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 AM393_RS25410 2a9cfb242541eefb12caa6f9f32d5c22 206 Hamap MF_00479 Electron transport complex subunit RsxG [rsxG]. 2 193 25.758 T 28-03-2018 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 AM393_RS25410 2a9cfb242541eefb12caa6f9f32d5c22 206 SMART SM00900 99 191 7.3E-35 T 28-03-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 AM393_RS25410 2a9cfb242541eefb12caa6f9f32d5c22 206 PIRSF PIRSF006091 1 202 1.8E-67 T 28-03-2018 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 AM393_RS18100 be3fd2aa3f6da7e1ab86f1d18feeb55d 399 Gene3D G3DSA:3.30.200.20 1 110 1.3E-36 T 28-03-2018 AM393_RS18100 be3fd2aa3f6da7e1ab86f1d18feeb55d 399 Hamap MF_01683 Methylthioribose kinase [mtnK]. 1 399 212.212 T 28-03-2018 IPR009212 Methylthioribose kinase GO:0009086|GO:0046522 KEGG: 00270+2.7.1.100|KEGG: 00500+2.7.1.10|MetaCyc: PWY-6754 AM393_RS18100 be3fd2aa3f6da7e1ab86f1d18feeb55d 399 Gene3D G3DSA:3.90.1200.10 111 399 3.8E-12 T 28-03-2018 AM393_RS18100 be3fd2aa3f6da7e1ab86f1d18feeb55d 399 PIRSF PIRSF031134 1 399 6.2E-165 T 28-03-2018 IPR009212 Methylthioribose kinase GO:0009086|GO:0046522 KEGG: 00270+2.7.1.100|KEGG: 00500+2.7.1.10|MetaCyc: PWY-6754 AM393_RS18100 be3fd2aa3f6da7e1ab86f1d18feeb55d 399 Pfam PF01636 Phosphotransferase enzyme family 32 268 3.6E-9 T 28-03-2018 IPR002575 Aminoglycoside phosphotransferase AM393_RS18100 be3fd2aa3f6da7e1ab86f1d18feeb55d 399 SUPERFAMILY SSF56112 1 397 6.71E-89 T 28-03-2018 IPR011009 Protein kinase-like domain AM393_RS18100 be3fd2aa3f6da7e1ab86f1d18feeb55d 399 TIGRFAM TIGR01767 MTRK: S-methyl-5-thioribose kinase 32 396 7.0E-194 T 28-03-2018 IPR009212 Methylthioribose kinase GO:0009086|GO:0046522 KEGG: 00270+2.7.1.100|KEGG: 00500+2.7.1.10|MetaCyc: PWY-6754 AM393_RS08275 70efbaafae0277ce633efa6cf1c98a73 123 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 123 28.438 T 28-03-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 AM393_RS08275 70efbaafae0277ce633efa6cf1c98a73 123 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 123 7.0E-60 T 28-03-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 AM393_RS08275 70efbaafae0277ce633efa6cf1c98a73 123 SMART SM01374 1 123 4.1E-86 T 28-03-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 AM393_RS08275 70efbaafae0277ce633efa6cf1c98a73 123 Gene3D G3DSA:2.40.150.20 1 123 3.2E-53 T 28-03-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 AM393_RS08275 70efbaafae0277ce633efa6cf1c98a73 123 Pfam PF00238 Ribosomal protein L14p/L23e 1 123 7.9E-55 T 28-03-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 AM393_RS08275 70efbaafae0277ce633efa6cf1c98a73 123 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 28-03-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM393_RS08275 70efbaafae0277ce633efa6cf1c98a73 123 SUPERFAMILY SSF50193 2 122 3.14E-51 T 28-03-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 AM393_RS13570 82c6718435061cc3befd3fa5da1dd0d6 439 TIGRFAM TIGR02630 xylose_isom_A: xylose isomerase 4 437 1.5E-214 T 28-03-2018 IPR013452 Xylose isomerase, bacterial-type GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 AM393_RS13570 82c6718435061cc3befd3fa5da1dd0d6 439 Hamap MF_00455 Xylose isomerase [xylA]. 11 437 52.77 T 28-03-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 AM393_RS13570 82c6718435061cc3befd3fa5da1dd0d6 439 Gene3D G3DSA:3.20.20.150 2 439 4.9E-109 T 28-03-2018 AM393_RS13570 82c6718435061cc3befd3fa5da1dd0d6 439 SUPERFAMILY SSF51658 4 438 3.42E-172 T 28-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AM393_RS13570 82c6718435061cc3befd3fa5da1dd0d6 439 PRINTS PR00688 Xylose isomerase signature 133 153 6.1E-86 T 28-03-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 AM393_RS13570 82c6718435061cc3befd3fa5da1dd0d6 439 PRINTS PR00688 Xylose isomerase signature 180 201 6.1E-86 T 28-03-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 AM393_RS13570 82c6718435061cc3befd3fa5da1dd0d6 439 PRINTS PR00688 Xylose isomerase signature 207 226 6.1E-86 T 28-03-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 AM393_RS13570 82c6718435061cc3befd3fa5da1dd0d6 439 PRINTS PR00688 Xylose isomerase signature 156 175 6.1E-86 T 28-03-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 AM393_RS13570 82c6718435061cc3befd3fa5da1dd0d6 439 PRINTS PR00688 Xylose isomerase signature 300 311 6.1E-86 T 28-03-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 AM393_RS13570 82c6718435061cc3befd3fa5da1dd0d6 439 PRINTS PR00688 Xylose isomerase signature 333 344 6.1E-86 T 28-03-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 AM393_RS13570 82c6718435061cc3befd3fa5da1dd0d6 439 PRINTS PR00688 Xylose isomerase signature 271 298 6.1E-86 T 28-03-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 AM393_RS13570 82c6718435061cc3befd3fa5da1dd0d6 439 PRINTS PR00688 Xylose isomerase signature 92 114 6.1E-86 T 28-03-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 AM393_RS13570 82c6718435061cc3befd3fa5da1dd0d6 439 PRINTS PR00688 Xylose isomerase signature 229 253 6.1E-86 T 28-03-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 AM393_RS21810 729efcdb5992ebe476388dcf2af3cd0c 320 Gene3D G3DSA:1.10.3720.10 3 302 3.9E-41 T 28-03-2018 AM393_RS21810 729efcdb5992ebe476388dcf2af3cd0c 320 SUPERFAMILY SSF161098 177 299 4.19E-23 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS21810 729efcdb5992ebe476388dcf2af3cd0c 320 SUPERFAMILY SSF161098 68 137 4.19E-23 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS21810 729efcdb5992ebe476388dcf2af3cd0c 320 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 91 310 1.3E-43 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS00855 c668f9765d3940358298bf70923237ed 293 PIRSF PIRSF001365 1 293 3.0E-55 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AM393_RS00855 c668f9765d3940358298bf70923237ed 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 126 143 5.7E-9 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AM393_RS00855 c668f9765d3940358298bf70923237ed 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 34 55 5.7E-9 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AM393_RS00855 c668f9765d3940358298bf70923237ed 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 69 87 5.7E-9 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AM393_RS00855 c668f9765d3940358298bf70923237ed 293 Pfam PF00701 Dihydrodipicolinate synthetase family 2 289 1.0E-35 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AM393_RS00855 c668f9765d3940358298bf70923237ed 293 SMART SM01130 1 293 9.9E-65 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AM393_RS00855 c668f9765d3940358298bf70923237ed 293 Gene3D G3DSA:3.20.20.70 1 293 1.3E-70 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM393_RS00855 c668f9765d3940358298bf70923237ed 293 SUPERFAMILY SSF51569 1 292 1.15E-61 T 28-03-2018 AM393_RS26645 4979b2490bb8e301c43c25c69286f544 135 SUPERFAMILY SSF81273 93 135 3.14E-12 T 28-03-2018 AM393_RS26645 4979b2490bb8e301c43c25c69286f544 135 Pfam PF00816 H-NS histone family 32 127 3.4E-20 T 28-03-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 AM393_RS26645 4979b2490bb8e301c43c25c69286f544 135 Gene3D G3DSA:4.10.430.10 93 135 4.2E-20 T 28-03-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 AM393_RS26645 4979b2490bb8e301c43c25c69286f544 135 PIRSF PIRSF002096 1 135 3.3E-57 T 28-03-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 AM393_RS26645 4979b2490bb8e301c43c25c69286f544 135 SUPERFAMILY SSF81273 2 58 3.73E-18 T 28-03-2018 AM393_RS26645 4979b2490bb8e301c43c25c69286f544 135 SMART SM00528 87 135 2.5E-26 T 28-03-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 AM393_RS26645 4979b2490bb8e301c43c25c69286f544 135 Gene3D G3DSA:1.10.287.1050 1 57 4.6E-26 T 28-03-2018 IPR027454 Histone-like protein H-NS family, oligomerisation domain GO:0046983 AM393_RS16170 3424d6debb4006c5495fbec1e00f66fa 229 SMART SM00448 3 116 1.9E-45 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM393_RS16170 3424d6debb4006c5495fbec1e00f66fa 229 SMART SM00862 150 225 2.0E-27 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM393_RS16170 3424d6debb4006c5495fbec1e00f66fa 229 Gene3D G3DSA:3.40.50.2300 2 125 1.7E-36 T 28-03-2018 AM393_RS16170 3424d6debb4006c5495fbec1e00f66fa 229 Pfam PF00072 Response regulator receiver domain 5 117 1.1E-28 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM393_RS16170 3424d6debb4006c5495fbec1e00f66fa 229 Gene3D G3DSA:1.10.10.10 126 228 1.1E-36 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS16170 3424d6debb4006c5495fbec1e00f66fa 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 225 2.6E-28 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM393_RS16170 3424d6debb4006c5495fbec1e00f66fa 229 SUPERFAMILY SSF52172 3 184 3.62E-43 T 28-03-2018 IPR011006 CheY-like superfamily AM393_RS16170 3424d6debb4006c5495fbec1e00f66fa 229 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 1 226 1.3E-115 T 28-03-2018 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 AM393_RS16815 e9340f301289a64108260c4db2c5537f 152 Gene3D G3DSA:2.40.50.140 80 152 1.0E-13 T 28-03-2018 AM393_RS16815 e9340f301289a64108260c4db2c5537f 152 SUPERFAMILY SSF141322 107 149 6.41E-7 T 28-03-2018 AM393_RS16815 e9340f301289a64108260c4db2c5537f 152 Pfam PF01957 NfeD-like C-terminal, partner-binding 13 149 4.8E-24 T 28-03-2018 IPR002810 NfeD-like, C-terminal domain AM393_RS15815 7c8452fd64ae1a298c0abfc4088fda08 185 Pfam PF10554 Ash protein family 22 133 1.5E-25 T 28-03-2018 IPR018880 Bacteriophage P4, Ash protein AM393_RS04430 465b50eca391dbe099b82fd8e05772d8 225 Gene3D G3DSA:3.40.50.300 1 220 7.4E-43 T 28-03-2018 AM393_RS04430 465b50eca391dbe099b82fd8e05772d8 225 SMART SM00382 26 206 1.5E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS04430 465b50eca391dbe099b82fd8e05772d8 225 SUPERFAMILY SSF52540 2 206 5.87E-44 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS04430 465b50eca391dbe099b82fd8e05772d8 225 Pfam PF00005 ABC transporter 23 157 3.4E-23 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS04430 465b50eca391dbe099b82fd8e05772d8 225 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS08755 aaabd9640deaac3c42e3f6eebb6093d5 368 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 3 121 1.1E-23 T 28-03-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AM393_RS08755 aaabd9640deaac3c42e3f6eebb6093d5 368 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 1 368 34.419 T 28-03-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AM393_RS08755 aaabd9640deaac3c42e3f6eebb6093d5 368 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 262 276 - T 28-03-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AM393_RS08755 aaabd9640deaac3c42e3f6eebb6093d5 368 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 145 354 2.0E-61 T 28-03-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AM393_RS08755 aaabd9640deaac3c42e3f6eebb6093d5 368 Gene3D G3DSA:3.40.50.720 1 144 2.2E-17 T 28-03-2018 AM393_RS08755 aaabd9640deaac3c42e3f6eebb6093d5 368 PIRSF PIRSF000148 1 368 7.0E-71 T 28-03-2018 AM393_RS08755 aaabd9640deaac3c42e3f6eebb6093d5 368 SMART SM00859 3 123 1.2E-25 T 28-03-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AM393_RS08755 aaabd9640deaac3c42e3f6eebb6093d5 368 SUPERFAMILY SSF55347 135 355 3.27E-79 T 28-03-2018 AM393_RS08755 aaabd9640deaac3c42e3f6eebb6093d5 368 SUPERFAMILY SSF51735 1 148 4.56E-54 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS08755 aaabd9640deaac3c42e3f6eebb6093d5 368 Gene3D G3DSA:3.30.360.10 145 351 4.6E-62 T 28-03-2018 AM393_RS08755 aaabd9640deaac3c42e3f6eebb6093d5 368 TIGRFAM TIGR01745 asd_gamma: aspartate-semialdehyde dehydrogenase 2 367 9.6E-222 T 28-03-2018 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AM393_RS02270 a01c97fb644fb64689935abf14946a6d 488 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 216 462 5.7E-96 T 28-03-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 AM393_RS02270 a01c97fb644fb64689935abf14946a6d 488 Gene3D G3DSA:1.10.1040.10 282 488 2.0E-67 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AM393_RS02270 a01c97fb644fb64689935abf14946a6d 488 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 218 230 - T 28-03-2018 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AM393_RS02270 a01c97fb644fb64689935abf14946a6d 488 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 26 188 4.5E-50 T 28-03-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 AM393_RS02270 a01c97fb644fb64689935abf14946a6d 488 SUPERFAMILY SSF51735 4 282 4.72E-101 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS02270 a01c97fb644fb64689935abf14946a6d 488 Gene3D G3DSA:3.40.50.720 1 281 4.2E-112 T 28-03-2018 AM393_RS02270 a01c97fb644fb64689935abf14946a6d 488 SUPERFAMILY SSF48179 283 486 9.18E-65 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AM393_RS02270 a01c97fb644fb64689935abf14946a6d 488 PRINTS PR00084 Mannitol dehydrogenase signature 248 263 3.3E-22 T 28-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AM393_RS02270 a01c97fb644fb64689935abf14946a6d 488 PRINTS PR00084 Mannitol dehydrogenase signature 218 231 3.3E-22 T 28-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AM393_RS02270 a01c97fb644fb64689935abf14946a6d 488 PRINTS PR00084 Mannitol dehydrogenase signature 27 37 3.3E-22 T 28-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AM393_RS02270 a01c97fb644fb64689935abf14946a6d 488 PRINTS PR00084 Mannitol dehydrogenase signature 179 192 3.3E-22 T 28-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AM393_RS23420 566f69ee317595f029c58c1fb0b6bfa6 146 SUPERFAMILY SSF55729 14 123 2.09E-20 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM393_RS23420 566f69ee317595f029c58c1fb0b6bfa6 146 Gene3D G3DSA:3.40.630.30 11 125 1.9E-15 T 28-03-2018 AM393_RS23420 566f69ee317595f029c58c1fb0b6bfa6 146 Pfam PF13673 Acetyltransferase (GNAT) domain 33 122 2.2E-11 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AM393_RS00690 fd045b195fc8370264882d86e2ba62e9 203 SUPERFAMILY SSF47781 66 137 1.14E-21 T 28-03-2018 IPR010994 RuvA domain 2-like AM393_RS00690 fd045b195fc8370264882d86e2ba62e9 203 SMART SM00278 73 92 1.3 T 28-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AM393_RS00690 fd045b195fc8370264882d86e2ba62e9 203 SMART SM00278 108 127 0.034 T 28-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AM393_RS00690 fd045b195fc8370264882d86e2ba62e9 203 SUPERFAMILY SSF50249 2 63 9.14E-18 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM393_RS00690 fd045b195fc8370264882d86e2ba62e9 203 Pfam PF01330 RuvA N terminal domain 2 62 1.4E-18 T 28-03-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 AM393_RS00690 fd045b195fc8370264882d86e2ba62e9 203 Gene3D G3DSA:1.10.150.280 57 80 0.032 T 28-03-2018 AM393_RS00690 fd045b195fc8370264882d86e2ba62e9 203 Gene3D G3DSA:1.10.150.20 81 142 4.7E-15 T 28-03-2018 AM393_RS00690 fd045b195fc8370264882d86e2ba62e9 203 Pfam PF07499 RuvA, C-terminal domain 159 201 7.8E-15 T 28-03-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 AM393_RS00690 fd045b195fc8370264882d86e2ba62e9 203 Pfam PF14520 Helix-hairpin-helix domain 72 130 2.7E-16 T 28-03-2018 AM393_RS00690 fd045b195fc8370264882d86e2ba62e9 203 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 203 8.5E-73 T 28-03-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 AM393_RS00690 fd045b195fc8370264882d86e2ba62e9 203 Gene3D G3DSA:2.40.50.140 2 56 2.1E-22 T 28-03-2018 AM393_RS00690 fd045b195fc8370264882d86e2ba62e9 203 Gene3D G3DSA:1.10.8.10 157 202 5.1E-15 T 28-03-2018 AM393_RS00690 fd045b195fc8370264882d86e2ba62e9 203 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 203 32.615 T 28-03-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 AM393_RS00690 fd045b195fc8370264882d86e2ba62e9 203 SUPERFAMILY SSF46929 157 201 1.06E-10 T 28-03-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 AM393_RS20875 a092b573ca0a26316f1af4b03c39ffaa 233 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS20875 a092b573ca0a26316f1af4b03c39ffaa 233 Pfam PF00005 ABC transporter 25 173 2.6E-35 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS20875 a092b573ca0a26316f1af4b03c39ffaa 233 SMART SM00382 34 222 1.7E-13 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS20875 a092b573ca0a26316f1af4b03c39ffaa 233 SUPERFAMILY SSF52540 5 225 7.59E-68 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS20875 a092b573ca0a26316f1af4b03c39ffaa 233 TIGRFAM TIGR02211 LolD_lipo_ex: lipoprotein releasing system, ATP-binding protein 5 224 2.3E-111 T 28-03-2018 IPR011924 Lipoprotein releasing system, ATP-binding protein GO:0005524|GO:0006810|GO:0016020 AM393_RS20875 a092b573ca0a26316f1af4b03c39ffaa 233 Gene3D G3DSA:3.40.50.300 1 231 2.1E-64 T 28-03-2018 AM393_RS20820 fee34d32612d23bc4f55fd6d69d0904f 340 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 234 251 - T 28-03-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 AM393_RS20820 fee34d32612d23bc4f55fd6d69d0904f 340 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 7 319 4.7E-98 T 28-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AM393_RS20820 fee34d32612d23bc4f55fd6d69d0904f 340 Gene3D G3DSA:3.20.20.300 1 340 1.6E-79 T 28-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AM393_RS20820 fee34d32612d23bc4f55fd6d69d0904f 340 Hamap MF_00364 Beta-hexosaminidase [nagZ]. 3 332 48.263 T 28-03-2018 IPR022956 Beta-hexosaminidase, bacterial GO:0004563 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822 AM393_RS20820 fee34d32612d23bc4f55fd6d69d0904f 340 SUPERFAMILY SSF51445 3 319 4.84E-87 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily AM393_RS19900 ec87c3e78f41c7298c6cfe3ecb2aae44 1417 Pfam PF09397 Ftsk gamma domain 1352 1412 4.2E-28 T 28-03-2018 IPR018541 FtsK gamma domain AM393_RS19900 ec87c3e78f41c7298c6cfe3ecb2aae44 1417 Pfam PF01580 FtsK/SpoIIIE family 1036 1249 1.7E-74 T 28-03-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 AM393_RS19900 ec87c3e78f41c7298c6cfe3ecb2aae44 1417 Gene3D G3DSA:3.40.50.300 719 1291 7.6E-55 T 28-03-2018 AM393_RS19900 ec87c3e78f41c7298c6cfe3ecb2aae44 1417 Gene3D G3DSA:1.10.10.10 1352 1406 5.8E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS19900 ec87c3e78f41c7298c6cfe3ecb2aae44 1417 SMART SM00843 1350 1415 3.6E-42 T 28-03-2018 IPR018541 FtsK gamma domain AM393_RS19900 ec87c3e78f41c7298c6cfe3ecb2aae44 1417 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 20 191 1.5E-41 T 28-03-2018 IPR025199 DNA translocase FtsK, 4TM region AM393_RS19900 ec87c3e78f41c7298c6cfe3ecb2aae44 1417 PRINTS PR01217 Proline rich extensin signature 391 407 5.8E-17 T 28-03-2018 AM393_RS19900 ec87c3e78f41c7298c6cfe3ecb2aae44 1417 PRINTS PR01217 Proline rich extensin signature 420 432 5.8E-17 T 28-03-2018 AM393_RS19900 ec87c3e78f41c7298c6cfe3ecb2aae44 1417 PRINTS PR01217 Proline rich extensin signature 491 508 5.8E-17 T 28-03-2018 AM393_RS19900 ec87c3e78f41c7298c6cfe3ecb2aae44 1417 PRINTS PR01217 Proline rich extensin signature 541 566 5.8E-17 T 28-03-2018 AM393_RS19900 ec87c3e78f41c7298c6cfe3ecb2aae44 1417 PRINTS PR01217 Proline rich extensin signature 464 480 5.8E-17 T 28-03-2018 AM393_RS19900 ec87c3e78f41c7298c6cfe3ecb2aae44 1417 PRINTS PR01217 Proline rich extensin signature 371 383 5.8E-17 T 28-03-2018 AM393_RS19900 ec87c3e78f41c7298c6cfe3ecb2aae44 1417 PRINTS PR01217 Proline rich extensin signature 435 456 5.8E-17 T 28-03-2018 AM393_RS19900 ec87c3e78f41c7298c6cfe3ecb2aae44 1417 SUPERFAMILY SSF52540 1010 1322 1.05E-51 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS19900 ec87c3e78f41c7298c6cfe3ecb2aae44 1417 SUPERFAMILY SSF46785 1350 1414 5.62E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS08440 ca5dead0b37304dd310a5effae63e666 72 PIRSF PIRSF006169 1 72 2.6E-37 T 28-03-2018 IPR010648 Uncharacterised protein family UPF0270 AM393_RS08440 ca5dead0b37304dd310a5effae63e666 72 Hamap MF_00690 UPF0270 protein YheU [yheU]. 1 70 25.525 T 28-03-2018 IPR010648 Uncharacterised protein family UPF0270 AM393_RS08440 ca5dead0b37304dd310a5effae63e666 72 SUPERFAMILY SSF118001 1 68 2.35E-29 T 28-03-2018 IPR010648 Uncharacterised protein family UPF0270 AM393_RS08440 ca5dead0b37304dd310a5effae63e666 72 Pfam PF06794 Uncharacterised protein family (UPF0270) 1 67 1.8E-36 T 28-03-2018 IPR010648 Uncharacterised protein family UPF0270 AM393_RS08440 ca5dead0b37304dd310a5effae63e666 72 Gene3D G3DSA:1.10.10.610 1 71 1.1E-36 T 28-03-2018 IPR010648 Uncharacterised protein family UPF0270 AM393_RS08440 ca5dead0b37304dd310a5effae63e666 72 ProDom PD026997 UPF0270 YHEU SO0879 3D-STRUCTURE LYASE PLU0398 YPO0179/Y3960/YP0178 ENOLASE HD0737 PSPTO1630 1 67 4.0E-28 T 28-03-2018 IPR010648 Uncharacterised protein family UPF0270 AM393_RS16420 315e0ffc3cd3073dabbb7542ba642b7a 295 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 3 281 9.0E-93 T 28-03-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 AM393_RS16420 315e0ffc3cd3073dabbb7542ba642b7a 295 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 56 78 - T 28-03-2018 IPR030470 UbiA prenyltransferase conserved site AM393_RS16420 315e0ffc3cd3073dabbb7542ba642b7a 295 Pfam PF01040 UbiA prenyltransferase family 18 266 9.3E-62 T 28-03-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 AM393_RS16420 315e0ffc3cd3073dabbb7542ba642b7a 295 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 1 283 18.127 T 28-03-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 AM393_RS12670 65ef9fbe8b34d3a3b30eba9e92f32606 188 PIRSF PIRSF005901 2 188 1.9E-66 T 28-03-2018 IPR020599 Translation elongation factor P/YeiP AM393_RS12670 65ef9fbe8b34d3a3b30eba9e92f32606 188 ProSitePatterns PS01275 Elongation factor P signature. 152 171 - T 28-03-2018 IPR013852 Translation elongation factor P/YeiP, conserved site AM393_RS12670 65ef9fbe8b34d3a3b30eba9e92f32606 188 Hamap MF_00141 Elongation factor P [efp]. 3 187 50.839 T 28-03-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 AM393_RS12670 65ef9fbe8b34d3a3b30eba9e92f32606 188 SMART SM00841 131 186 4.1E-33 T 28-03-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 AM393_RS12670 65ef9fbe8b34d3a3b30eba9e92f32606 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 7 61 1.4E-23 T 28-03-2018 IPR013185 Translation elongation factor, KOW-like AM393_RS12670 65ef9fbe8b34d3a3b30eba9e92f32606 188 SMART SM01185 69 123 1.6E-26 T 28-03-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 AM393_RS12670 65ef9fbe8b34d3a3b30eba9e92f32606 188 SUPERFAMILY SSF50249 70 128 4.07E-18 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM393_RS12670 65ef9fbe8b34d3a3b30eba9e92f32606 188 Gene3D G3DSA:2.40.50.140 131 186 1.4E-27 T 28-03-2018 AM393_RS12670 65ef9fbe8b34d3a3b30eba9e92f32606 188 TIGRFAM TIGR00038 efp: translation elongation factor P 6 187 3.6E-76 T 28-03-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 AM393_RS12670 65ef9fbe8b34d3a3b30eba9e92f32606 188 Pfam PF09285 Elongation factor P, C-terminal 131 186 5.8E-26 T 28-03-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 AM393_RS12670 65ef9fbe8b34d3a3b30eba9e92f32606 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 72 123 1.0E-22 T 28-03-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 AM393_RS12670 65ef9fbe8b34d3a3b30eba9e92f32606 188 SUPERFAMILY SSF50249 130 187 1.05E-18 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM393_RS12670 65ef9fbe8b34d3a3b30eba9e92f32606 188 SUPERFAMILY SSF50104 3 63 2.35E-17 T 28-03-2018 IPR008991 Translation protein SH3-like domain AM393_RS12670 65ef9fbe8b34d3a3b30eba9e92f32606 188 Gene3D G3DSA:2.30.30.30 4 63 3.2E-24 T 28-03-2018 IPR014722 Ribosomal protein L2 domain 2 AM393_RS12670 65ef9fbe8b34d3a3b30eba9e92f32606 188 Gene3D G3DSA:2.40.50.140 67 129 9.3E-25 T 28-03-2018 AM393_RS25730 4d60adb77ba15862b547fcaf32d7e823 296 Gene3D G3DSA:3.40.190.10 89 173 2.1E-15 T 28-03-2018 AM393_RS25730 4d60adb77ba15862b547fcaf32d7e823 296 Gene3D G3DSA:1.10.10.10 1 82 3.8E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS25730 4d60adb77ba15862b547fcaf32d7e823 296 SUPERFAMILY SSF46785 3 108 2.27E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS25730 4d60adb77ba15862b547fcaf32d7e823 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 7.2E-19 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS25730 4d60adb77ba15862b547fcaf32d7e823 296 Gene3D G3DSA:3.40.190.10 174 261 2.4E-22 T 28-03-2018 AM393_RS25730 4d60adb77ba15862b547fcaf32d7e823 296 Pfam PF03466 LysR substrate binding domain 87 290 3.3E-38 T 28-03-2018 IPR005119 LysR, substrate-binding AM393_RS25730 4d60adb77ba15862b547fcaf32d7e823 296 SUPERFAMILY SSF53850 86 291 7.24E-42 T 28-03-2018 AM393_RS15545 d076930e5913879f7343c7a5ee267e93 251 SMART SM00849 11 165 1.4E-36 T 28-03-2018 IPR001279 Metallo-beta-lactamase AM393_RS15545 d076930e5913879f7343c7a5ee267e93 251 Pfam PF00753 Metallo-beta-lactamase superfamily 15 165 1.1E-19 T 28-03-2018 IPR001279 Metallo-beta-lactamase AM393_RS15545 d076930e5913879f7343c7a5ee267e93 251 PIRSF PIRSF005457 1 251 2.0E-91 T 28-03-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 AM393_RS15545 d076930e5913879f7343c7a5ee267e93 251 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 166 251 1.9E-23 T 28-03-2018 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 AM393_RS15545 d076930e5913879f7343c7a5ee267e93 251 SUPERFAMILY SSF56281 1 251 2.88E-67 T 28-03-2018 IPR001279 Metallo-beta-lactamase AM393_RS15545 d076930e5913879f7343c7a5ee267e93 251 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 4 251 2.1E-103 T 28-03-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 AM393_RS15545 d076930e5913879f7343c7a5ee267e93 251 Gene3D G3DSA:3.60.15.10 1 251 3.8E-71 T 28-03-2018 IPR001279 Metallo-beta-lactamase AM393_RS15545 d076930e5913879f7343c7a5ee267e93 251 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 1 251 44.934 T 28-03-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 AM393_RS14690 1bea374c27e200d34f2558841c73b3e8 233 SMART SM00382 24 209 1.2E-20 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS14690 1bea374c27e200d34f2558841c73b3e8 233 Gene3D G3DSA:3.40.50.300 1 231 2.2E-58 T 28-03-2018 AM393_RS14690 1bea374c27e200d34f2558841c73b3e8 233 Pfam PF00005 ABC transporter 18 157 3.1E-34 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS14690 1bea374c27e200d34f2558841c73b3e8 233 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS14690 1bea374c27e200d34f2558841c73b3e8 233 TIGRFAM TIGR01277 thiQ: thiamine ABC transporter, ATP-binding protein 2 212 5.8E-106 T 28-03-2018 IPR005968 Thiamine ABC transporter, ATP-binding protein ThiQ GO:0005524|GO:0006810|GO:0016021|GO:0042626 AM393_RS14690 1bea374c27e200d34f2558841c73b3e8 233 SUPERFAMILY SSF52540 1 222 1.89E-63 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS06735 f0c05fda163a06439d8cb6740f337850 245 Pfam PF01553 Acyltransferase 60 180 5.5E-32 T 28-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AM393_RS06735 f0c05fda163a06439d8cb6740f337850 245 Gene3D G3DSA:3.40.1130.10 48 245 1.3E-37 T 28-03-2018 AM393_RS06735 f0c05fda163a06439d8cb6740f337850 245 SMART SM00563 67 182 6.4E-38 T 28-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AM393_RS06735 f0c05fda163a06439d8cb6740f337850 245 SUPERFAMILY SSF69593 2 240 4.18E-60 T 28-03-2018 AM393_RS06735 f0c05fda163a06439d8cb6740f337850 245 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 50 180 1.4E-49 T 28-03-2018 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|MetaCyc: PWY-7782|Reactome: R-HSA-1483166 AM393_RS10180 6d1d727a972e2db8bc966a906a49c2df 463 PIRSF PIRSF002808 11 461 4.5E-102 T 28-03-2018 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 AM393_RS10180 6d1d727a972e2db8bc966a906a49c2df 463 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 36 426 2.2E-146 T 28-03-2018 AM393_RS10180 6d1d727a972e2db8bc966a906a49c2df 463 Gene3D G3DSA:1.20.1250.20 246 460 1.7E-18 T 28-03-2018 AM393_RS10180 6d1d727a972e2db8bc966a906a49c2df 463 Gene3D G3DSA:1.20.1250.20 22 228 3.4E-23 T 28-03-2018 AM393_RS10180 6d1d727a972e2db8bc966a906a49c2df 463 Pfam PF07690 Major Facilitator Superfamily 35 397 5.4E-33 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS10180 6d1d727a972e2db8bc966a906a49c2df 463 ProSitePatterns PS00942 glpT family of transporters signature. 156 172 - T 28-03-2018 IPR021159 Glycerate/sugar phosphate transporter, conserved site GO:0005215|GO:0006810|GO:0016021 Reactome: R-HSA-70153 AM393_RS10180 6d1d727a972e2db8bc966a906a49c2df 463 SUPERFAMILY SSF103473 20 454 7.32E-58 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS04250 71f2c96027a4dfcaea5efe66313c791f 120 SUPERFAMILY SSF159894 1 111 3.4E-58 T 28-03-2018 AM393_RS04250 71f2c96027a4dfcaea5efe66313c791f 120 Pfam PF09400 Protein of unknown function (DUF2002) 1 110 5.6E-60 T 28-03-2018 IPR018994 Protein of unknown function DUF2002 AM393_RS07535 81b24833753108a505586cdb6c4c8733 109 PRINTS PR01651 Protein-export SecG membrane protein signature 38 54 6.2E-43 T 28-03-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AM393_RS07535 81b24833753108a505586cdb6c4c8733 109 PRINTS PR01651 Protein-export SecG membrane protein signature 54 76 6.2E-43 T 28-03-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AM393_RS07535 81b24833753108a505586cdb6c4c8733 109 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 6.2E-43 T 28-03-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AM393_RS07535 81b24833753108a505586cdb6c4c8733 109 PRINTS PR01651 Protein-export SecG membrane protein signature 23 37 6.2E-43 T 28-03-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AM393_RS07535 81b24833753108a505586cdb6c4c8733 109 Pfam PF03840 Preprotein translocase SecG subunit 5 72 7.2E-22 T 28-03-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AM393_RS07535 81b24833753108a505586cdb6c4c8733 109 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 3 74 2.5E-27 T 28-03-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AM393_RS23940 5454a97ef5f3424d3a1b89e0095d5097 313 SUPERFAMILY SSF53613 4 295 1.23E-71 T 28-03-2018 IPR029056 Ribokinase-like AM393_RS23940 5454a97ef5f3424d3a1b89e0095d5097 313 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 248 261 - T 28-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AM393_RS23940 5454a97ef5f3424d3a1b89e0095d5097 313 Gene3D G3DSA:3.40.1190.20 1 313 4.6E-70 T 28-03-2018 IPR029056 Ribokinase-like AM393_RS23940 5454a97ef5f3424d3a1b89e0095d5097 313 Pfam PF00294 pfkB family carbohydrate kinase 4 292 1.3E-62 T 28-03-2018 IPR011611 Carbohydrate kinase PfkB AM393_RS23940 5454a97ef5f3424d3a1b89e0095d5097 313 Hamap MF_01987 Ribokinase [rbsK]. 3 303 21.965 T 28-03-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 AM393_RS23940 5454a97ef5f3424d3a1b89e0095d5097 313 PRINTS PR00990 Ribokinase signature 34 53 4.2E-29 T 28-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AM393_RS23940 5454a97ef5f3424d3a1b89e0095d5097 313 PRINTS PR00990 Ribokinase signature 107 120 4.2E-29 T 28-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AM393_RS23940 5454a97ef5f3424d3a1b89e0095d5097 313 PRINTS PR00990 Ribokinase signature 219 230 4.2E-29 T 28-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AM393_RS23940 5454a97ef5f3424d3a1b89e0095d5097 313 PRINTS PR00990 Ribokinase signature 175 190 4.2E-29 T 28-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AM393_RS23940 5454a97ef5f3424d3a1b89e0095d5097 313 PRINTS PR00990 Ribokinase signature 7 28 4.2E-29 T 28-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AM393_RS24435 4fe5c4c235698b8d4a1dca427ae43741 498 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 30 465 1.0E-84 T 28-03-2018 IPR001248 Purine-cytosine permease GO:0005215|GO:0016020|GO:0055085 AM393_RS16160 0350fca495f7a258dec7f162e403b903 1045 Pfam PF13555 P-loop containing region of AAA domain 26 67 4.1E-7 T 28-03-2018 AM393_RS16160 0350fca495f7a258dec7f162e403b903 1045 Pfam PF13558 Putative exonuclease SbcCD, C subunit 928 999 4.7E-15 T 28-03-2018 AM393_RS16160 0350fca495f7a258dec7f162e403b903 1045 Gene3D G3DSA:3.40.50.300 1 192 1.2E-25 T 28-03-2018 AM393_RS16160 0350fca495f7a258dec7f162e403b903 1045 TIGRFAM TIGR00618 sbcc: exonuclease SbcC 1 1037 5.3E-266 T 28-03-2018 IPR004592 Nuclease SbcC, gammaproteobacteria type AM393_RS16160 0350fca495f7a258dec7f162e403b903 1045 Gene3D G3DSA:3.40.50.300 704 1041 1.6E-17 T 28-03-2018 AM393_RS16160 0350fca495f7a258dec7f162e403b903 1045 SUPERFAMILY SSF52540 215 251 7.14E-40 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS16160 0350fca495f7a258dec7f162e403b903 1045 SUPERFAMILY SSF52540 1 182 7.14E-40 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS16160 0350fca495f7a258dec7f162e403b903 1045 SUPERFAMILY SSF52540 825 1031 7.14E-40 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS23510 043dfbb658dd57b2c7c418fba2402874 263 SUPERFAMILY SSF54506 3 262 2.16E-75 T 28-03-2018 AM393_RS23510 043dfbb658dd57b2c7c418fba2402874 263 Gene3D G3DSA:3.10.310.10 1 126 9.8E-27 T 28-03-2018 AM393_RS23510 043dfbb658dd57b2c7c418fba2402874 263 Pfam PF02567 Phenazine biosynthesis-like protein 9 258 6.5E-50 T 28-03-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 AM393_RS23510 043dfbb658dd57b2c7c418fba2402874 263 Gene3D G3DSA:3.10.310.10 127 250 1.0E-33 T 28-03-2018 AM393_RS23510 043dfbb658dd57b2c7c418fba2402874 263 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 3 231 5.9E-31 T 28-03-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 AM393_RS23510 043dfbb658dd57b2c7c418fba2402874 263 PIRSF PIRSF016184 1 262 4.4E-49 T 28-03-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 AM393_RS10750 fca327c040d5546ef1b88f1c55a78e01 305 SUPERFAMILY SSF53474 23 297 1.33E-63 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AM393_RS10750 fca327c040d5546ef1b88f1c55a78e01 305 ProSitePatterns PS01174 Lipolytic enzymes "G-D-X-G" family, putative serine active site. 147 159 - T 28-03-2018 IPR033140 Lipase, GDXG, putative serine active site AM393_RS10750 fca327c040d5546ef1b88f1c55a78e01 305 Pfam PF07859 alpha/beta hydrolase fold 75 280 5.8E-65 T 28-03-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 AM393_RS10750 fca327c040d5546ef1b88f1c55a78e01 305 Gene3D G3DSA:3.40.50.1820 1 302 4.3E-56 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AM393_RS08830 9e3409c732a88fd2be0f616394f301da 295 Gene3D G3DSA:1.10.3720.10 13 295 2.7E-44 T 28-03-2018 AM393_RS08830 9e3409c732a88fd2be0f616394f301da 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 86 293 1.2E-18 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS08830 9e3409c732a88fd2be0f616394f301da 295 SUPERFAMILY SSF161098 56 282 2.09E-51 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS12990 28a097ba0001775d4496197aa89708f7 247 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 80 93 - T 28-03-2018 IPR020583 Inositol monophosphatase, metal-binding site AM393_RS12990 28a097ba0001775d4496197aa89708f7 247 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 1 245 2.3E-106 T 28-03-2018 IPR006240 3(2),5 -bisphosphate nucleotidase, bacterial GO:0000287|GO:0016020 KEGG: 00920+3.1.3.7 AM393_RS12990 28a097ba0001775d4496197aa89708f7 247 Gene3D G3DSA:3.40.190.80 149 246 7.7E-33 T 28-03-2018 AM393_RS12990 28a097ba0001775d4496197aa89708f7 247 PRINTS PR00377 Inositol monophosphatase superfamily signature 80 96 9.6E-5 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AM393_RS12990 28a097ba0001775d4496197aa89708f7 247 PRINTS PR00377 Inositol monophosphatase superfamily signature 35 55 9.6E-5 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AM393_RS12990 28a097ba0001775d4496197aa89708f7 247 PRINTS PR00377 Inositol monophosphatase superfamily signature 57 73 9.6E-5 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AM393_RS12990 28a097ba0001775d4496197aa89708f7 247 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 205 219 - T 28-03-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 AM393_RS12990 28a097ba0001775d4496197aa89708f7 247 Gene3D G3DSA:3.30.540.10 1 148 2.8E-40 T 28-03-2018 AM393_RS12990 28a097ba0001775d4496197aa89708f7 247 Pfam PF00459 Inositol monophosphatase family 3 234 2.0E-50 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AM393_RS12990 28a097ba0001775d4496197aa89708f7 247 SUPERFAMILY SSF56655 1 244 1.44E-73 T 28-03-2018 AM393_RS19950 a30c037de26083433c8e711bda40984e 760 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 11 760 0.0 T 28-03-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 AM393_RS19950 a30c037de26083433c8e711bda40984e 760 ProSitePatterns PS00850 Glycine radical domain signature. 730 738 - T 28-03-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site AM393_RS19950 a30c037de26083433c8e711bda40984e 760 SUPERFAMILY SSF51998 4 759 2.96E-295 T 28-03-2018 AM393_RS19950 a30c037de26083433c8e711bda40984e 760 PIRSF PIRSF000379 8 760 0.0 T 28-03-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 AM393_RS19950 a30c037de26083433c8e711bda40984e 760 Pfam PF02901 Pyruvate formate lyase-like 24 614 3.8E-206 T 28-03-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 AM393_RS19950 a30c037de26083433c8e711bda40984e 760 Gene3D G3DSA:3.20.70.20 2 760 7.8E-297 T 28-03-2018 AM393_RS19950 a30c037de26083433c8e711bda40984e 760 Pfam PF01228 Glycine radical 630 741 4.4E-43 T 28-03-2018 IPR001150 Glycine radical domain GO:0003824|GO:0008152 AM393_RS10545 0f62c48920a44d64a1c5d912b2569a0e 629 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 368 391 - T 28-03-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 AM393_RS10545 0f62c48920a44d64a1c5d912b2569a0e 629 Gene3D G3DSA:3.50.50.60 5 264 1.9E-75 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS10545 0f62c48920a44d64a1c5d912b2569a0e 629 Gene3D G3DSA:1.10.10.10 548 629 0.32 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS10545 0f62c48920a44d64a1c5d912b2569a0e 629 SUPERFAMILY SSF51905 97 261 1.5E-52 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS10545 0f62c48920a44d64a1c5d912b2569a0e 629 SUPERFAMILY SSF51905 7 66 1.5E-52 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS10545 0f62c48920a44d64a1c5d912b2569a0e 629 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 5 624 43.04 T 28-03-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 AM393_RS10545 0f62c48920a44d64a1c5d912b2569a0e 629 Pfam PF13932 GidA associated domain 403 616 3.4E-79 T 28-03-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 AM393_RS10545 0f62c48920a44d64a1c5d912b2569a0e 629 SMART SM01228 546 617 2.1E-44 T 28-03-2018 AM393_RS10545 0f62c48920a44d64a1c5d912b2569a0e 629 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 7 622 0.0 T 28-03-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 AM393_RS10545 0f62c48920a44d64a1c5d912b2569a0e 629 Pfam PF01134 Glucose inhibited division protein A 8 398 1.0E-169 T 28-03-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 AM393_RS10545 0f62c48920a44d64a1c5d912b2569a0e 629 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 273 287 - T 28-03-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 AM393_RS06850 4f00688e350e6b32db154319fb56f894 432 Pfam PF01928 CYTH domain 3 196 3.4E-32 T 28-03-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 AM393_RS06850 4f00688e350e6b32db154319fb56f894 432 SMART SM01118 2 202 8.8E-41 T 28-03-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 AM393_RS06850 4f00688e350e6b32db154319fb56f894 432 Gene3D G3DSA:2.40.320.10 1 209 6.0E-47 T 28-03-2018 AM393_RS06850 4f00688e350e6b32db154319fb56f894 432 SUPERFAMILY SSF55154 1 219 5.4E-51 T 28-03-2018 IPR033469 CYTH-like domain Reactome: R-HSA-196819 AM393_RS27360 c2649ed028775a679a9591061eaff872 667 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 21 506 4.1E-195 T 28-03-2018 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 AM393_RS27360 c2649ed028775a679a9591061eaff872 667 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 59 506 7.2E-163 T 28-03-2018 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 AM393_RS27360 c2649ed028775a679a9591061eaff872 667 ProSitePatterns PS01303 BCCT family of transporters signature. 323 332 - T 28-03-2018 IPR018093 BCCT transporter, conserved site GO:0005215|GO:0006810|GO:0016020 AM393_RS09870 99997c43cc0dee8c40a6f28679b957d0 400 Hamap MF_02062 Sodium/glutamate symporter [gltS]. 2 397 24.707 T 28-03-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 AM393_RS09870 99997c43cc0dee8c40a6f28679b957d0 400 Pfam PF03616 Sodium/glutamate symporter 2 366 2.3E-159 T 28-03-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 AM393_RS09870 99997c43cc0dee8c40a6f28679b957d0 400 TIGRFAM TIGR00210 gltS: sodium/glutamate symporter 2 397 1.7E-192 T 28-03-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 AM393_RS02520 eb4daf503db80116da3039f779619464 84 Gene3D G3DSA:3.10.20.30 1 84 2.6E-16 T 28-03-2018 IPR012675 Beta-grasp domain AM393_RS02520 eb4daf503db80116da3039f779619464 84 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 10 77 6.9E-13 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AM393_RS02520 eb4daf503db80116da3039f779619464 84 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 37 45 - T 28-03-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AM393_RS02520 eb4daf503db80116da3039f779619464 84 SUPERFAMILY SSF54292 3 83 1.02E-22 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AM393_RS22445 5487b4dcb1b088781e866829ca7f9af9 301 Gene3D G3DSA:3.40.190.10 88 176 2.9E-15 T 28-03-2018 AM393_RS22445 5487b4dcb1b088781e866829ca7f9af9 301 SUPERFAMILY SSF53850 89 297 4.34E-44 T 28-03-2018 AM393_RS22445 5487b4dcb1b088781e866829ca7f9af9 301 Gene3D G3DSA:1.10.10.10 3 84 2.3E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS22445 5487b4dcb1b088781e866829ca7f9af9 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 2.9E-16 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS22445 5487b4dcb1b088781e866829ca7f9af9 301 SUPERFAMILY SSF46785 4 84 4.5E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS22445 5487b4dcb1b088781e866829ca7f9af9 301 Gene3D G3DSA:3.40.190.10 177 266 4.7E-24 T 28-03-2018 AM393_RS22445 5487b4dcb1b088781e866829ca7f9af9 301 Pfam PF03466 LysR substrate binding domain 88 294 3.2E-44 T 28-03-2018 IPR005119 LysR, substrate-binding AM393_RS01770 2ef41ec44423101feff0a67e1469bbc1 330 Gene3D G3DSA:3.40.50.2000 57 153 0.0046 T 28-03-2018 AM393_RS01770 2ef41ec44423101feff0a67e1469bbc1 330 SUPERFAMILY SSF53756 39 328 2.34E-58 T 28-03-2018 AM393_RS01770 2ef41ec44423101feff0a67e1469bbc1 330 Pfam PF13439 Glycosyltransferase Family 4 29 144 1.2E-8 T 28-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 AM393_RS01770 2ef41ec44423101feff0a67e1469bbc1 330 Gene3D G3DSA:3.40.50.2000 158 320 3.5E-31 T 28-03-2018 AM393_RS01770 2ef41ec44423101feff0a67e1469bbc1 330 Pfam PF00534 Glycosyl transferases group 1 148 296 4.4E-28 T 28-03-2018 IPR001296 Glycosyl transferase, family 1 AM393_RS22835 abbcc23df3e3d2c789f89ac33c1587ab 77 Pfam PF01206 Sulfurtransferase TusA 9 77 3.0E-19 T 28-03-2018 IPR001455 TusA-like domain AM393_RS22835 abbcc23df3e3d2c789f89ac33c1587ab 77 Gene3D G3DSA:3.30.110.40 5 77 7.9E-22 T 28-03-2018 IPR001455 TusA-like domain AM393_RS22835 abbcc23df3e3d2c789f89ac33c1587ab 77 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 10 34 - T 28-03-2018 IPR001455 TusA-like domain AM393_RS22835 abbcc23df3e3d2c789f89ac33c1587ab 77 SUPERFAMILY SSF64307 3 77 6.67E-24 T 28-03-2018 IPR001455 TusA-like domain AM393_RS07140 b00b0d1f3fcf60fd8ff41c6330f92383 532 Gene3D G3DSA:3.30.420.40 1 247 2.2E-62 T 28-03-2018 AM393_RS07140 b00b0d1f3fcf60fd8ff41c6330f92383 532 Hamap MF_02053 Autoinducer-2 kinase [lsrK]. 5 520 76.157 T 28-03-2018 IPR033676 Autoinducer-2 kinase GO:0009372|GO:0071518 AM393_RS07140 b00b0d1f3fcf60fd8ff41c6330f92383 532 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 3 250 9.3E-50 T 28-03-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 AM393_RS07140 b00b0d1f3fcf60fd8ff41c6330f92383 532 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 292 456 1.0E-16 T 28-03-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 AM393_RS07140 b00b0d1f3fcf60fd8ff41c6330f92383 532 SUPERFAMILY SSF53067 3 253 1.58E-58 T 28-03-2018 AM393_RS07140 b00b0d1f3fcf60fd8ff41c6330f92383 532 SUPERFAMILY SSF53067 252 502 1.02E-46 T 28-03-2018 AM393_RS07140 b00b0d1f3fcf60fd8ff41c6330f92383 532 Gene3D G3DSA:3.30.420.40 248 514 4.7E-41 T 28-03-2018 AM393_RS07140 b00b0d1f3fcf60fd8ff41c6330f92383 532 PIRSF PIRSF000538 1 509 4.6E-116 T 28-03-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AM393_RS05275 e5d6daae5c639a648437062673d646b9 91 ProSitePatterns PS01139 Bacterial microcompartiments proteins signature. 21 40 - T 28-03-2018 IPR020808 Bacterial microcompartments protein, conserved site AM393_RS05275 e5d6daae5c639a648437062673d646b9 91 SUPERFAMILY SSF143414 3 89 1.07E-31 T 28-03-2018 AM393_RS05275 e5d6daae5c639a648437062673d646b9 91 Pfam PF00936 BMC domain 4 79 1.6E-29 T 28-03-2018 IPR000249 Microcompartment protein, bacteria AM393_RS05275 e5d6daae5c639a648437062673d646b9 91 SMART SM00877 3 79 4.2E-37 T 28-03-2018 IPR000249 Microcompartment protein, bacteria AM393_RS05275 e5d6daae5c639a648437062673d646b9 91 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 4 45 5.0E-16 T 28-03-2018 AM393_RS19615 61a0d7a962adb7694d22805d99f3ecd1 358 Pfam PF12571 Phage tail-collar fibre protein 1 148 1.3E-38 T 28-03-2018 IPR022225 Phage tail fibre protein AM393_RS26475 9f3e3c6793eb2018ae694f6bd9a68189 328 Hamap MF_01004 Vitamin B12 import system permease protein BtuC [btuC]. 1 326 32.013 T 28-03-2018 IPR023691 ABC transporter, vitamin B12 import, permease protein BtuC GO:0015889|GO:0016020 AM393_RS26475 9f3e3c6793eb2018ae694f6bd9a68189 328 SUPERFAMILY SSF81345 7 323 3.92E-85 T 28-03-2018 IPR029022 ABC transporter, BtuC-like AM393_RS26475 9f3e3c6793eb2018ae694f6bd9a68189 328 Pfam PF01032 FecCD transport family 22 323 1.1E-87 T 28-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 AM393_RS26475 9f3e3c6793eb2018ae694f6bd9a68189 328 Gene3D G3DSA:1.10.3470.10 7 328 5.2E-65 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AM393_RS24785 215868c5ebef32a4a7da9750b23435cc 317 Gene3D G3DSA:3.40.630.30 148 310 3.6E-24 T 28-03-2018 AM393_RS24785 215868c5ebef32a4a7da9750b23435cc 317 Pfam PF00583 Acetyltransferase (GNAT) family 193 290 8.3E-13 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AM393_RS24785 215868c5ebef32a4a7da9750b23435cc 317 SUPERFAMILY SSF46785 5 143 8.44E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS24785 215868c5ebef32a4a7da9750b23435cc 317 PRINTS PR00598 Bacterial regulatory protein MarR family signature 67 82 7.6E-5 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM393_RS24785 215868c5ebef32a4a7da9750b23435cc 317 PRINTS PR00598 Bacterial regulatory protein MarR family signature 50 66 7.6E-5 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM393_RS24785 215868c5ebef32a4a7da9750b23435cc 317 PRINTS PR00598 Bacterial regulatory protein MarR family signature 86 102 7.6E-5 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM393_RS24785 215868c5ebef32a4a7da9750b23435cc 317 SUPERFAMILY SSF55729 163 302 4.01E-24 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM393_RS24785 215868c5ebef32a4a7da9750b23435cc 317 Pfam PF12802 MarR family 34 90 6.2E-11 T 28-03-2018 AM393_RS24785 215868c5ebef32a4a7da9750b23435cc 317 SMART SM00347 26 126 2.1E-7 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM393_RS24785 215868c5ebef32a4a7da9750b23435cc 317 Gene3D G3DSA:1.10.10.10 3 147 3.3E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS18005 37da5ef03a5a4b00744524e04197612c 329 SUPERFAMILY SSF81345 5 324 5.1E-72 T 28-03-2018 IPR029022 ABC transporter, BtuC-like AM393_RS18005 37da5ef03a5a4b00744524e04197612c 329 Gene3D G3DSA:1.10.3470.10 2 329 1.8E-63 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AM393_RS18005 37da5ef03a5a4b00744524e04197612c 329 Pfam PF01032 FecCD transport family 19 323 1.5E-84 T 28-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 AM393_RS14920 4c90f7370a9b60f607b350e08a946d15 401 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 158 186 - T 28-03-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 AM393_RS14920 4c90f7370a9b60f607b350e08a946d15 401 Pfam PF00482 Type II secretion system (T2SS), protein F 64 186 2.4E-29 T 28-03-2018 IPR018076 Type II secretion system F domain AM393_RS14920 4c90f7370a9b60f607b350e08a946d15 401 Pfam PF00482 Type II secretion system (T2SS), protein F 269 388 1.1E-25 T 28-03-2018 IPR018076 Type II secretion system F domain AM393_RS14920 4c90f7370a9b60f607b350e08a946d15 401 PRINTS PR00812 Bacterial general secretion pathway protein F signature 158 186 3.3E-11 T 28-03-2018 IPR003004 GspF/PilC family AM393_RS14920 4c90f7370a9b60f607b350e08a946d15 401 PRINTS PR00812 Bacterial general secretion pathway protein F signature 361 375 3.3E-11 T 28-03-2018 IPR003004 GspF/PilC family AM393_RS14920 4c90f7370a9b60f607b350e08a946d15 401 PRINTS PR00812 Bacterial general secretion pathway protein F signature 377 396 3.3E-11 T 28-03-2018 IPR003004 GspF/PilC family AM393_RS14920 4c90f7370a9b60f607b350e08a946d15 401 PRINTS PR00812 Bacterial general secretion pathway protein F signature 59 71 3.3E-11 T 28-03-2018 IPR003004 GspF/PilC family AM393_RS23665 a751ceea286122ab55ee98e9cf88efbe 140 Gene3D G3DSA:3.10.180.10 1 128 6.7E-12 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM393_RS23665 a751ceea286122ab55ee98e9cf88efbe 140 SUPERFAMILY SSF54593 7 125 5.64E-14 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM393_RS01260 92b919d8d97a635e2b326a5f77432b4e 366 PIRSF PIRSF017494 4 363 7.3E-153 T 28-03-2018 IPR010091 Thiazolinyl imide reductase AM393_RS01260 92b919d8d97a635e2b326a5f77432b4e 366 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 10 126 4.5E-24 T 28-03-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 AM393_RS01260 92b919d8d97a635e2b326a5f77432b4e 366 SUPERFAMILY SSF51735 8 140 2.06E-14 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS01260 92b919d8d97a635e2b326a5f77432b4e 366 Gene3D G3DSA:3.40.50.720 4 138 4.3E-14 T 28-03-2018 AM393_RS01260 92b919d8d97a635e2b326a5f77432b4e 366 TIGRFAM TIGR01761 thiaz-red: thiazolinyl imide reductase 6 348 4.3E-161 T 28-03-2018 IPR010091 Thiazolinyl imide reductase AM393_RS01260 92b919d8d97a635e2b326a5f77432b4e 366 Gene3D G3DSA:3.30.360.10 139 284 1.7E-45 T 28-03-2018 AM393_RS24210 fc744fcf27e15814d084c0a5e102a8dc 350 Gene3D G3DSA:3.40.50.2300 189 350 2.7E-29 T 28-03-2018 AM393_RS24210 fc744fcf27e15814d084c0a5e102a8dc 350 Gene3D G3DSA:1.10.10.10 11 35 0.0011 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS24210 fc744fcf27e15814d084c0a5e102a8dc 350 ProSitePatterns PS00356 LacI-type HTH domain signature. 24 42 - T 28-03-2018 AM393_RS24210 fc744fcf27e15814d084c0a5e102a8dc 350 Pfam PF13377 Periplasmic binding protein-like domain 188 348 3.0E-25 T 28-03-2018 AM393_RS24210 fc744fcf27e15814d084c0a5e102a8dc 350 SUPERFAMILY SSF53822 79 339 4.91E-41 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AM393_RS24210 fc744fcf27e15814d084c0a5e102a8dc 350 Gene3D G3DSA:1.10.260.40 36 73 8.4E-18 T 28-03-2018 AM393_RS24210 fc744fcf27e15814d084c0a5e102a8dc 350 Gene3D G3DSA:3.40.50.2300 74 188 1.9E-20 T 28-03-2018 AM393_RS24210 fc744fcf27e15814d084c0a5e102a8dc 350 SMART SM00354 21 91 9.6E-23 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM393_RS24210 fc744fcf27e15814d084c0a5e102a8dc 350 Pfam PF00356 Bacterial regulatory proteins, lacI family 23 68 1.3E-14 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM393_RS24210 fc744fcf27e15814d084c0a5e102a8dc 350 SUPERFAMILY SSF47413 21 78 7.69E-15 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM393_RS14610 e42e27d8c55d5a43f4b2908714b11dc6 428 Hamap MF_01183 Chaperone SurA [surA]. 9 428 34.31 T 28-03-2018 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0042710|GO:0043165|GO:0050821|GO:0051082|GO:0051085|GO:0060274 AM393_RS14610 e42e27d8c55d5a43f4b2908714b11dc6 428 Gene3D G3DSA:1.10.4030.10 21 148 1.2E-25 T 28-03-2018 AM393_RS14610 e42e27d8c55d5a43f4b2908714b11dc6 428 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 321 342 - T 28-03-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 AM393_RS14610 e42e27d8c55d5a43f4b2908714b11dc6 428 SUPERFAMILY SSF54534 283 384 1.9E-33 T 28-03-2018 AM393_RS14610 e42e27d8c55d5a43f4b2908714b11dc6 428 Pfam PF09312 SurA N-terminal domain 25 142 6.3E-46 T 28-03-2018 IPR015391 SurA N-terminal AM393_RS14610 e42e27d8c55d5a43f4b2908714b11dc6 428 Gene3D G3DSA:3.10.50.40 279 386 2.3E-33 T 28-03-2018 AM393_RS14610 e42e27d8c55d5a43f4b2908714b11dc6 428 Pfam PF13616 PPIC-type PPIASE domain 283 383 2.4E-26 T 28-03-2018 AM393_RS14610 e42e27d8c55d5a43f4b2908714b11dc6 428 SUPERFAMILY SSF109998 25 201 8.24E-46 T 28-03-2018 IPR027304 Trigger factor/SurA domain AM393_RS14610 e42e27d8c55d5a43f4b2908714b11dc6 428 SUPERFAMILY SSF54534 173 275 9.16E-28 T 28-03-2018 AM393_RS14610 e42e27d8c55d5a43f4b2908714b11dc6 428 Gene3D G3DSA:3.10.50.40 163 278 4.1E-24 T 28-03-2018 AM393_RS14610 e42e27d8c55d5a43f4b2908714b11dc6 428 Pfam PF00639 PPIC-type PPIASE domain 178 272 8.8E-22 T 28-03-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 AM393_RS11575 3fed6746cbb2754b45bdbdd0124f2adf 729 TIGRFAM TIGR02437 FadB: fatty oxidation complex, alpha subunit FadB 1 714 0.0 T 28-03-2018 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 AM393_RS11575 3fed6746cbb2754b45bdbdd0124f2adf 729 Pfam PF00378 Enoyl-CoA hydratase/isomerase 14 206 1.3E-38 T 28-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 AM393_RS11575 3fed6746cbb2754b45bdbdd0124f2adf 729 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 627 691 1.6E-6 T 28-03-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 AM393_RS11575 3fed6746cbb2754b45bdbdd0124f2adf 729 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 496 592 3.0E-25 T 28-03-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 AM393_RS11575 3fed6746cbb2754b45bdbdd0124f2adf 729 Gene3D G3DSA:3.40.50.720 255 495 1.6E-59 T 28-03-2018 AM393_RS11575 3fed6746cbb2754b45bdbdd0124f2adf 729 SUPERFAMILY SSF48179 495 639 8.16E-31 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AM393_RS11575 3fed6746cbb2754b45bdbdd0124f2adf 729 Gene3D G3DSA:3.90.226.10 6 205 2.8E-53 T 28-03-2018 AM393_RS11575 3fed6746cbb2754b45bdbdd0124f2adf 729 Gene3D G3DSA:1.10.1040.10 503 592 8.3E-22 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AM393_RS11575 3fed6746cbb2754b45bdbdd0124f2adf 729 SUPERFAMILY SSF52096 3 303 1.88E-68 T 28-03-2018 IPR029045 ClpP/crotonase-like domain AM393_RS11575 3fed6746cbb2754b45bdbdd0124f2adf 729 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 493 517 - T 28-03-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 AM393_RS11575 3fed6746cbb2754b45bdbdd0124f2adf 729 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 106 126 - T 28-03-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 AM393_RS11575 3fed6746cbb2754b45bdbdd0124f2adf 729 Hamap MF_01621 Fatty acid oxidation complex subunit alpha [fadB]. 1 715 53.408 T 28-03-2018 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 AM393_RS11575 3fed6746cbb2754b45bdbdd0124f2adf 729 SUPERFAMILY SSF51735 314 495 2.91E-56 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS11575 3fed6746cbb2754b45bdbdd0124f2adf 729 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 316 494 2.2E-60 T 28-03-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 AM393_RS11575 3fed6746cbb2754b45bdbdd0124f2adf 729 Gene3D G3DSA:1.10.1040.10 622 714 1.0E-16 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AM393_RS11575 3fed6746cbb2754b45bdbdd0124f2adf 729 SUPERFAMILY SSF48179 622 714 2.38E-23 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AM393_RS08780 6ad5580f6d01e77b51530ac962af9670 231 SUPERFAMILY SSF51182 1 231 2.23E-79 T 28-03-2018 IPR011051 RmlC-like cupin domain AM393_RS08780 6ad5580f6d01e77b51530ac962af9670 231 Gene3D G3DSA:2.60.120.10 132 231 3.7E-25 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AM393_RS08780 6ad5580f6d01e77b51530ac962af9670 231 Pfam PF02678 Pirin 7 119 6.9E-37 T 28-03-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 AM393_RS08780 6ad5580f6d01e77b51530ac962af9670 231 PIRSF PIRSF006232 1 230 3.9E-56 T 28-03-2018 IPR012093 Pirin Reactome: R-HSA-8935690 AM393_RS08780 6ad5580f6d01e77b51530ac962af9670 231 Gene3D G3DSA:2.60.120.10 11 131 1.1E-47 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AM393_RS10150 8b0341eff6a3fd9aa0b7d50415d56a1f 367 Pfam PF00266 Aminotransferase class-V 40 307 5.6E-25 T 28-03-2018 IPR000192 Aminotransferase class V domain AM393_RS10150 8b0341eff6a3fd9aa0b7d50415d56a1f 367 PIRSF PIRSF000524 1 365 1.5E-61 T 28-03-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661 AM393_RS10150 8b0341eff6a3fd9aa0b7d50415d56a1f 367 SUPERFAMILY SSF53383 6 363 1.5E-85 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM393_RS10150 8b0341eff6a3fd9aa0b7d50415d56a1f 367 TIGRFAM TIGR03301 PhnW-AepZ: 2-aminoethylphosphonate aminotransferase 7 363 1.5E-153 T 28-03-2018 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 AM393_RS10150 8b0341eff6a3fd9aa0b7d50415d56a1f 367 TIGRFAM TIGR02326 transamin_PhnW: 2-aminoethylphosphonate--pyruvate transaminase 4 366 3.4E-192 T 28-03-2018 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 AM393_RS10150 8b0341eff6a3fd9aa0b7d50415d56a1f 367 Hamap MF_01376 2-aminoethylphosphonate--pyruvate transaminase [phnW]. 1 367 205.683 T 28-03-2018 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 AM393_RS10150 8b0341eff6a3fd9aa0b7d50415d56a1f 367 Gene3D G3DSA:3.40.640.10 17 255 2.8E-34 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM393_RS10150 8b0341eff6a3fd9aa0b7d50415d56a1f 367 Gene3D G3DSA:3.90.1150.10 256 366 1.6E-31 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM393_RS00430 6cb37d55c7fe9ca4453feb1213c4cb4c 188 Pfam PF02659 Putative manganese efflux pump 31 182 5.6E-53 T 28-03-2018 IPR003810 Putative manganese efflux pump AM393_RS00430 6cb37d55c7fe9ca4453feb1213c4cb4c 188 Hamap MF_01521 Probable manganese efflux pump MntP [mntP]. 1 185 25.383 T 28-03-2018 IPR022929 Putative manganese efflux pump MntP AM393_RS08875 fd83a5c3170148a3efbe4aa19b75f41d 127 Pfam PF12568 Acetyltransferase (GNAT) domain 2 125 1.3E-52 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AM393_RS08875 fd83a5c3170148a3efbe4aa19b75f41d 127 Hamap MF_02018 PanD maturation factor [panM]. 1 126 33.099 T 28-03-2018 IPR032900 PanD regulatory factor PanM GO:0015940|GO:0031638 AM393_RS08875 fd83a5c3170148a3efbe4aa19b75f41d 127 SUPERFAMILY SSF55729 7 119 1.13E-10 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM393_RS08875 fd83a5c3170148a3efbe4aa19b75f41d 127 Gene3D G3DSA:3.40.630.30 1 127 1.1E-12 T 28-03-2018 AM393_RS01950 4f646d754114aa11cb22079e181a2179 242 Gene3D G3DSA:3.40.50.720 1 241 2.7E-57 T 28-03-2018 AM393_RS01950 4f646d754114aa11cb22079e181a2179 242 Pfam PF00106 short chain dehydrogenase 8 194 3.5E-58 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS01950 4f646d754114aa11cb22079e181a2179 242 SUPERFAMILY SSF51735 1 234 8.7E-66 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS01950 4f646d754114aa11cb22079e181a2179 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 5.1E-28 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS01950 4f646d754114aa11cb22079e181a2179 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 5.1E-28 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS01950 4f646d754114aa11cb22079e181a2179 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 5.1E-28 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS01950 4f646d754114aa11cb22079e181a2179 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 5.1E-28 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS01950 4f646d754114aa11cb22079e181a2179 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 204 224 5.1E-28 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS01950 4f646d754114aa11cb22079e181a2179 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 5.1E-28 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS01950 4f646d754114aa11cb22079e181a2179 242 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM393_RS04270 a2a5a57fad3dc53e0b7af4d27ed35dc7 81 Pfam PF00462 Glutaredoxin 3 57 3.7E-13 T 28-03-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 AM393_RS04270 a2a5a57fad3dc53e0b7af4d27ed35dc7 81 SUPERFAMILY SSF52833 1 72 4.72E-19 T 28-03-2018 IPR012336 Thioredoxin-like fold AM393_RS04270 a2a5a57fad3dc53e0b7af4d27ed35dc7 81 Gene3D G3DSA:3.40.30.10 1 75 5.0E-12 T 28-03-2018 AM393_RS04270 a2a5a57fad3dc53e0b7af4d27ed35dc7 81 TIGRFAM TIGR02194 GlrX_NrdH: glutaredoxin-like protein NrdH 3 72 2.3E-33 T 28-03-2018 IPR011909 Glutaredoxin-like protein NrdH GO:0045454 AM393_RS09010 61354ba3c1eae50d3f21a095dadca6fb 286 SUPERFAMILY SSF53850 91 270 1.32E-19 T 28-03-2018 AM393_RS09010 61354ba3c1eae50d3f21a095dadca6fb 286 Gene3D G3DSA:3.40.190.10 91 177 1.4E-8 T 28-03-2018 AM393_RS09010 61354ba3c1eae50d3f21a095dadca6fb 286 SUPERFAMILY SSF46785 5 90 3.59E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS09010 61354ba3c1eae50d3f21a095dadca6fb 286 Pfam PF03466 LysR substrate binding domain 90 270 4.0E-20 T 28-03-2018 IPR005119 LysR, substrate-binding AM393_RS09010 61354ba3c1eae50d3f21a095dadca6fb 286 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 1.3E-16 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS09010 61354ba3c1eae50d3f21a095dadca6fb 286 Gene3D G3DSA:1.10.10.10 1 85 2.1E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS09010 61354ba3c1eae50d3f21a095dadca6fb 286 Gene3D G3DSA:3.40.190.10 178 255 7.6E-8 T 28-03-2018 AM393_RS07440 b1b1938578b42d2e5d76a04c8400d668 335 Gene3D G3DSA:3.20.20.30 6 329 2.2E-71 T 28-03-2018 AM393_RS07440 b1b1938578b42d2e5d76a04c8400d668 335 SUPERFAMILY SSF51679 7 327 6.71E-86 T 28-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AM393_RS07440 b1b1938578b42d2e5d76a04c8400d668 335 Pfam PF00296 Luciferase-like monooxygenase 9 302 1.7E-34 T 28-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AM393_RS07440 b1b1938578b42d2e5d76a04c8400d668 335 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 8 328 2.1E-133 T 28-03-2018 IPR019949 Luciferase family oxidoreductase, group 1 AM393_RS12580 8d6bba012cf16702eb0eab4c87e331ac 478 PRINTS PR00145 Argininosuccinate lyase family signature 137 159 2.2E-5 T 28-03-2018 AM393_RS12580 8d6bba012cf16702eb0eab4c87e331ac 478 PRINTS PR00145 Argininosuccinate lyase family signature 320 336 2.2E-5 T 28-03-2018 AM393_RS12580 8d6bba012cf16702eb0eab4c87e331ac 478 PRINTS PR00145 Argininosuccinate lyase family signature 178 198 2.2E-5 T 28-03-2018 AM393_RS12580 8d6bba012cf16702eb0eab4c87e331ac 478 Gene3D G3DSA:1.10.40.30 419 468 8.3E-17 T 28-03-2018 AM393_RS12580 8d6bba012cf16702eb0eab4c87e331ac 478 Gene3D G3DSA:1.10.275.10 3 141 9.9E-53 T 28-03-2018 IPR024083 Fumarase/histidase, N-terminal AM393_RS12580 8d6bba012cf16702eb0eab4c87e331ac 478 ProSitePatterns PS00163 Fumarate lyases signature. 320 329 - T 28-03-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 AM393_RS12580 8d6bba012cf16702eb0eab4c87e331ac 478 PRINTS PR00149 Fumarate lyase superfamily signature 320 336 6.7E-28 T 28-03-2018 IPR000362 Fumarate lyase family AM393_RS12580 8d6bba012cf16702eb0eab4c87e331ac 478 PRINTS PR00149 Fumarate lyase superfamily signature 183 201 6.7E-28 T 28-03-2018 IPR000362 Fumarate lyase family AM393_RS12580 8d6bba012cf16702eb0eab4c87e331ac 478 PRINTS PR00149 Fumarate lyase superfamily signature 138 156 6.7E-28 T 28-03-2018 IPR000362 Fumarate lyase family AM393_RS12580 8d6bba012cf16702eb0eab4c87e331ac 478 PRINTS PR00149 Fumarate lyase superfamily signature 274 301 6.7E-28 T 28-03-2018 IPR000362 Fumarate lyase family AM393_RS12580 8d6bba012cf16702eb0eab4c87e331ac 478 Gene3D G3DSA:1.20.200.10 142 418 2.3E-70 T 28-03-2018 AM393_RS12580 8d6bba012cf16702eb0eab4c87e331ac 478 Pfam PF10415 Fumarase C C-terminus 411 464 3.4E-16 T 28-03-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AM393_RS12580 8d6bba012cf16702eb0eab4c87e331ac 478 SUPERFAMILY SSF48557 1 458 5.01E-144 T 28-03-2018 IPR008948 L-Aspartase-like GO:0003824 AM393_RS12580 8d6bba012cf16702eb0eab4c87e331ac 478 TIGRFAM TIGR00839 aspA: aspartate ammonia-lyase 6 474 8.5E-264 T 28-03-2018 IPR004708 Aspartate ammonia-lyase GO:0006531|GO:0008797 KEGG: 00250+4.3.1.1 AM393_RS12580 8d6bba012cf16702eb0eab4c87e331ac 478 Pfam PF00206 Lyase 13 345 3.3E-109 T 28-03-2018 IPR022761 Fumarate lyase, N-terminal AM393_RS00360 f4a15af61c28e6a73c7d9a40c1744ca5 231 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 3 219 2.2E-69 T 28-03-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 AM393_RS00360 f4a15af61c28e6a73c7d9a40c1744ca5 231 Gene3D G3DSA:3.30.420.40 1 138 2.4E-40 T 28-03-2018 AM393_RS00360 f4a15af61c28e6a73c7d9a40c1744ca5 231 SUPERFAMILY SSF53067 108 217 6.86E-30 T 28-03-2018 AM393_RS00360 f4a15af61c28e6a73c7d9a40c1744ca5 231 Pfam PF00814 Glycoprotease family 28 133 2.4E-29 T 28-03-2018 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AM393_RS00360 f4a15af61c28e6a73c7d9a40c1744ca5 231 Gene3D G3DSA:3.30.420.40 141 231 0.0013 T 28-03-2018 AM393_RS00360 f4a15af61c28e6a73c7d9a40c1744ca5 231 SUPERFAMILY SSF53067 3 105 1.68E-30 T 28-03-2018 AM393_RS24935 5490c6ce1aadd877437c6f779783df93 514 Gene3D G3DSA:3.30.70.20 198 235 1.2E-19 T 28-03-2018 AM393_RS24935 5490c6ce1aadd877437c6f779783df93 514 Pfam PF14711 Respiratory nitrate reductase beta C-terminal 358 436 3.9E-29 T 28-03-2018 IPR029263 Respiratory nitrate reductase beta, C-terminal KEGG: 00910+1.7.99.4 AM393_RS24935 5490c6ce1aadd877437c6f779783df93 514 TIGRFAM TIGR01660 narH: nitrate reductase, beta subunit 1 493 1.4E-297 T 28-03-2018 IPR006547 Nitrate reductase, beta subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.99.4 AM393_RS24935 5490c6ce1aadd877437c6f779783df93 514 Gene3D G3DSA:3.30.70.20 5 197 3.3E-27 T 28-03-2018 AM393_RS24935 5490c6ce1aadd877437c6f779783df93 514 SUPERFAMILY SSF54862 1 501 3.35E-180 T 28-03-2018 AM393_RS24935 5490c6ce1aadd877437c6f779783df93 514 Pfam PF13247 4Fe-4S dicluster domain 175 271 1.7E-37 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM393_RS24935 5490c6ce1aadd877437c6f779783df93 514 Gene3D G3DSA:3.30.70.20 236 366 1.0E-31 T 28-03-2018 AM393_RS24935 5490c6ce1aadd877437c6f779783df93 514 Gene3D G3DSA:3.30.70.20 367 467 5.0E-29 T 28-03-2018 AM393_RS01110 ceed494264252d62a08a81138e8c24b9 275 Pfam PF00950 ABC 3 transport family 11 265 2.1E-73 T 28-03-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 AM393_RS01110 ceed494264252d62a08a81138e8c24b9 275 Gene3D G3DSA:1.10.3470.10 3 274 6.3E-25 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AM393_RS01110 ceed494264252d62a08a81138e8c24b9 275 SUPERFAMILY SSF81345 4 263 2.88E-34 T 28-03-2018 IPR029022 ABC transporter, BtuC-like AM393_RS00330 d7a6a5da290bf93195656013fa5a4c4a 232 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 129 228 7.5E-30 T 28-03-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 AM393_RS00330 d7a6a5da290bf93195656013fa5a4c4a 232 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 5 232 28.734 T 28-03-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 AM393_RS00330 d7a6a5da290bf93195656013fa5a4c4a 232 SUPERFAMILY SSF63848 126 231 1.96E-30 T 28-03-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 AM393_RS00330 d7a6a5da290bf93195656013fa5a4c4a 232 Pfam PF05209 Septum formation inhibitor MinC, N-terminal domain 1 103 4.2E-33 T 28-03-2018 IPR007874 Septum formation inhibitor MinC, N-terminal GO:0051302 AM393_RS00330 d7a6a5da290bf93195656013fa5a4c4a 232 Gene3D G3DSA:2.160.20.70 117 232 4.0E-29 T 28-03-2018 AM393_RS00330 d7a6a5da290bf93195656013fa5a4c4a 232 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 6 231 1.1E-67 T 28-03-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 AM393_RS12380 34391e33844668a1171a1b76e34e86d9 761 SMART SM00448 643 754 1.4E-12 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM393_RS12380 34391e33844668a1171a1b76e34e86d9 761 Pfam PF00672 HAMP domain 323 362 1.9E-8 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM393_RS12380 34391e33844668a1171a1b76e34e86d9 761 Gene3D G3DSA:3.30.565.10 482 657 4.3E-32 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS12380 34391e33844668a1171a1b76e34e86d9 761 SMART SM00387 505 623 8.9E-26 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS12380 34391e33844668a1171a1b76e34e86d9 761 Gene3D G3DSA:3.40.50.2300 658 761 4.8E-17 T 28-03-2018 AM393_RS12380 34391e33844668a1171a1b76e34e86d9 761 SMART SM00304 315 368 1.4E-8 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM393_RS12380 34391e33844668a1171a1b76e34e86d9 761 SUPERFAMILY SSF47384 397 462 6.28E-7 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM393_RS12380 34391e33844668a1171a1b76e34e86d9 761 Gene3D G3DSA:1.10.287.130 387 460 1.8E-6 T 28-03-2018 AM393_RS12380 34391e33844668a1171a1b76e34e86d9 761 SUPERFAMILY SSF158472 321 365 1.22E-8 T 28-03-2018 AM393_RS12380 34391e33844668a1171a1b76e34e86d9 761 SUPERFAMILY SSF52172 645 759 4.55E-20 T 28-03-2018 IPR011006 CheY-like superfamily AM393_RS12380 34391e33844668a1171a1b76e34e86d9 761 SMART SM00388 402 464 9.5E-8 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM393_RS12380 34391e33844668a1171a1b76e34e86d9 761 Pfam PF00512 His Kinase A (phospho-acceptor) domain 403 463 7.3E-7 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM393_RS12380 34391e33844668a1171a1b76e34e86d9 761 PRINTS PR00344 Bacterial sensor protein C-terminal signature 552 566 5.7E-16 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM393_RS12380 34391e33844668a1171a1b76e34e86d9 761 PRINTS PR00344 Bacterial sensor protein C-terminal signature 570 580 5.7E-16 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM393_RS12380 34391e33844668a1171a1b76e34e86d9 761 PRINTS PR00344 Bacterial sensor protein C-terminal signature 583 601 5.7E-16 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM393_RS12380 34391e33844668a1171a1b76e34e86d9 761 PRINTS PR00344 Bacterial sensor protein C-terminal signature 607 620 5.7E-16 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM393_RS12380 34391e33844668a1171a1b76e34e86d9 761 Pfam PF00072 Response regulator receiver domain 646 754 1.6E-9 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM393_RS12380 34391e33844668a1171a1b76e34e86d9 761 SUPERFAMILY SSF55874 455 625 4.32E-36 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS12380 34391e33844668a1171a1b76e34e86d9 761 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 506 621 1.5E-18 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS11350 d9addf38dc258d32dfa7a6836a5f347a 461 PIRSF PIRSF006060 1 455 8.3E-62 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AM393_RS11350 d9addf38dc258d32dfa7a6836a5f347a 461 Pfam PF00324 Amino acid permease 16 428 1.9E-101 T 28-03-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 AM393_RS11350 d9addf38dc258d32dfa7a6836a5f347a 461 ProSitePatterns PS00218 Amino acid permeases signature. 41 71 - T 28-03-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 AM393_RS21390 61951730faa96c200aca16885856b9a6 435 Gene3D G3DSA:3.40.250.10 139 283 3.5E-27 T 28-03-2018 IPR001763 Rhodanese-like domain AM393_RS21390 61951730faa96c200aca16885856b9a6 435 Pfam PF00581 Rhodanese-like domain 297 418 8.4E-11 T 28-03-2018 IPR001763 Rhodanese-like domain AM393_RS21390 61951730faa96c200aca16885856b9a6 435 Pfam PF00581 Rhodanese-like domain 180 263 1.5E-11 T 28-03-2018 IPR001763 Rhodanese-like domain AM393_RS21390 61951730faa96c200aca16885856b9a6 435 SMART SM00450 146 267 2.3E-15 T 28-03-2018 IPR001763 Rhodanese-like domain AM393_RS21390 61951730faa96c200aca16885856b9a6 435 SMART SM00450 26 139 16.0 T 28-03-2018 IPR001763 Rhodanese-like domain AM393_RS21390 61951730faa96c200aca16885856b9a6 435 SMART SM00450 294 422 8.0E-14 T 28-03-2018 IPR001763 Rhodanese-like domain AM393_RS21390 61951730faa96c200aca16885856b9a6 435 Gene3D G3DSA:3.40.250.10 284 435 4.9E-26 T 28-03-2018 IPR001763 Rhodanese-like domain AM393_RS21390 61951730faa96c200aca16885856b9a6 435 SUPERFAMILY SSF52821 32 126 7.28E-8 T 28-03-2018 IPR001763 Rhodanese-like domain AM393_RS21390 61951730faa96c200aca16885856b9a6 435 ProSitePatterns PS00380 Rhodanese signature 1. 181 192 - T 28-03-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 AM393_RS21390 61951730faa96c200aca16885856b9a6 435 ProSitePatterns PS00683 Rhodanese C-terminal signature. 406 416 - T 28-03-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 AM393_RS21390 61951730faa96c200aca16885856b9a6 435 Gene3D G3DSA:3.40.250.10 21 132 6.5E-7 T 28-03-2018 IPR001763 Rhodanese-like domain AM393_RS21390 61951730faa96c200aca16885856b9a6 435 SUPERFAMILY SSF52821 141 274 2.36E-26 T 28-03-2018 IPR001763 Rhodanese-like domain AM393_RS21390 61951730faa96c200aca16885856b9a6 435 SUPERFAMILY SSF52821 289 429 2.75E-29 T 28-03-2018 IPR001763 Rhodanese-like domain AM393_RS26920 16315a56c2901d412235e03c7e0b0bc0 1136 Pfam PF06761 Intracellular multiplication and human macrophage-killing 416 733 4.7E-73 T 28-03-2018 IPR009612 ImcF-related AM393_RS26920 16315a56c2901d412235e03c7e0b0bc0 1136 Pfam PF06744 Type VI secretion protein IcmF C-terminal 863 1060 2.7E-51 T 28-03-2018 IPR010623 Type VI secretion system IcmF, C-terminal AM393_RS18285 7c28b68f91ac9dcd127ea51edc377107 319 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 31 89 6.0E-15 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS18285 7c28b68f91ac9dcd127ea51edc377107 319 Pfam PF03466 LysR substrate binding domain 115 317 3.6E-15 T 28-03-2018 IPR005119 LysR, substrate-binding AM393_RS18285 7c28b68f91ac9dcd127ea51edc377107 319 SUPERFAMILY SSF53850 115 314 6.33E-19 T 28-03-2018 AM393_RS18285 7c28b68f91ac9dcd127ea51edc377107 319 Gene3D G3DSA:3.40.190.10 204 285 1.3E-6 T 28-03-2018 AM393_RS18285 7c28b68f91ac9dcd127ea51edc377107 319 SUPERFAMILY SSF46785 26 107 2.18E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS18285 7c28b68f91ac9dcd127ea51edc377107 319 Gene3D G3DSA:3.40.190.10 117 203 4.6E-10 T 28-03-2018 AM393_RS18285 7c28b68f91ac9dcd127ea51edc377107 319 Gene3D G3DSA:1.10.10.10 24 109 1.2E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS09370 26458f70005f4a8988618ff0c5a69f9b 451 SUPERFAMILY SSF103473 12 436 8.37E-83 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS09370 26458f70005f4a8988618ff0c5a69f9b 451 ProSitePatterns PS00217 Sugar transport proteins signature 2. 120 145 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM393_RS09370 26458f70005f4a8988618ff0c5a69f9b 451 ProSitePatterns PS00216 Sugar transport proteins signature 1. 78 94 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM393_RS09370 26458f70005f4a8988618ff0c5a69f9b 451 Gene3D G3DSA:1.20.1250.20 232 450 1.5E-27 T 28-03-2018 AM393_RS09370 26458f70005f4a8988618ff0c5a69f9b 451 Gene3D G3DSA:1.20.1250.20 13 214 4.5E-41 T 28-03-2018 AM393_RS09370 26458f70005f4a8988618ff0c5a69f9b 451 TIGRFAM TIGR00895 2A0115: MFS transporter, aromatic acid:H+ symporter (AAHS) family 7 403 4.0E-134 T 28-03-2018 IPR004746 Major facilitator superfamily, aromatic acid:H+ symporter family GO:0005215|GO:0006810|GO:0016021 AM393_RS09370 26458f70005f4a8988618ff0c5a69f9b 451 Pfam PF07690 Major Facilitator Superfamily 29 281 5.0E-36 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS08265 1a6377b3ef5b5fc6796affa39279224a 179 Pfam PF00281 Ribosomal protein L5 24 80 9.9E-29 T 28-03-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM393_RS08265 1a6377b3ef5b5fc6796affa39279224a 179 SUPERFAMILY SSF55282 4 179 2.35E-79 T 28-03-2018 IPR022803 Ribosomal protein L5 domain Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM393_RS08265 1a6377b3ef5b5fc6796affa39279224a 179 Pfam PF00673 ribosomal L5P family C-terminus 84 177 5.4E-41 T 28-03-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM393_RS08265 1a6377b3ef5b5fc6796affa39279224a 179 Gene3D G3DSA:3.30.1440.10 1 179 3.9E-81 T 28-03-2018 IPR022803 Ribosomal protein L5 domain Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM393_RS08265 1a6377b3ef5b5fc6796affa39279224a 179 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 28-03-2018 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM393_RS08265 1a6377b3ef5b5fc6796affa39279224a 179 PIRSF PIRSF002161 1 179 1.8E-66 T 28-03-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM393_RS08265 1a6377b3ef5b5fc6796affa39279224a 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 44.826 T 28-03-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM393_RS16535 b6c2478bbd21ff8ee85e49d02c4d8161 590 SUPERFAMILY SSF52540 332 572 1.78E-76 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS16535 b6c2478bbd21ff8ee85e49d02c4d8161 590 SMART SM00382 361 547 3.7E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS16535 b6c2478bbd21ff8ee85e49d02c4d8161 590 Gene3D G3DSA:3.40.50.300 325 577 9.0E-63 T 28-03-2018 AM393_RS16535 b6c2478bbd21ff8ee85e49d02c4d8161 590 Gene3D G3DSA:1.20.1560.10 1 324 1.4E-58 T 28-03-2018 AM393_RS16535 b6c2478bbd21ff8ee85e49d02c4d8161 590 Pfam PF00664 ABC transporter transmembrane region 21 291 7.2E-36 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AM393_RS16535 b6c2478bbd21ff8ee85e49d02c4d8161 590 ProSitePatterns PS00211 ABC transporters family signature. 473 487 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS16535 b6c2478bbd21ff8ee85e49d02c4d8161 590 SUPERFAMILY SSF90123 7 322 5.1E-71 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AM393_RS16535 b6c2478bbd21ff8ee85e49d02c4d8161 590 Pfam PF00005 ABC transporter 352 500 1.3E-28 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS12790 b5269e3dea7fa6d47abe104fee245668 451 SMART SM00646 261 420 8.3E-75 T 28-03-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 AM393_RS12790 b5269e3dea7fa6d47abe104fee245668 451 SUPERFAMILY SSF53187 347 423 1.51E-54 T 28-03-2018 AM393_RS12790 b5269e3dea7fa6d47abe104fee245668 451 SUPERFAMILY SSF53187 199 295 1.51E-54 T 28-03-2018 AM393_RS12790 b5269e3dea7fa6d47abe104fee245668 451 Gene3D G3DSA:3.40.630.40 196 427 8.5E-60 T 28-03-2018 AM393_RS12790 b5269e3dea7fa6d47abe104fee245668 451 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 201 420 4.3E-49 T 28-03-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 AM393_RS28850 5a29f5141771ff7c280b80b06d128ad6 189 Pfam PF02796 Helix-turn-helix domain of resolvase 144 188 8.9E-15 T 28-03-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 AM393_RS28850 5a29f5141771ff7c280b80b06d128ad6 189 Pfam PF00239 Resolvase, N terminal domain 3 141 8.0E-34 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AM393_RS28850 5a29f5141771ff7c280b80b06d128ad6 189 Gene3D G3DSA:3.40.50.1390 1 112 2.7E-24 T 28-03-2018 AM393_RS28850 5a29f5141771ff7c280b80b06d128ad6 189 Gene3D G3DSA:1.20.5.40 113 140 7.7E-10 T 28-03-2018 AM393_RS28850 5a29f5141771ff7c280b80b06d128ad6 189 SUPERFAMILY SSF46689 144 186 3.4E-7 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS28850 5a29f5141771ff7c280b80b06d128ad6 189 Gene3D G3DSA:1.10.10.60 144 188 9.6E-10 T 28-03-2018 AM393_RS28850 5a29f5141771ff7c280b80b06d128ad6 189 ProSitePatterns PS00398 Site-specific recombinases signature 2. 60 72 - T 28-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 AM393_RS28850 5a29f5141771ff7c280b80b06d128ad6 189 SUPERFAMILY SSF53041 1 141 3.01E-33 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AM393_RS28850 5a29f5141771ff7c280b80b06d128ad6 189 SMART SM00857 2 142 4.1E-42 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AM393_RS06720 c8c8dc6aaf8999fc7212a64b81fc36b4 175 Pfam PF00583 Acetyltransferase (GNAT) family 61 147 2.0E-7 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AM393_RS06720 c8c8dc6aaf8999fc7212a64b81fc36b4 175 SUPERFAMILY SSF55729 12 154 7.15E-15 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM393_RS06720 c8c8dc6aaf8999fc7212a64b81fc36b4 175 Gene3D G3DSA:3.40.630.30 8 161 1.0E-12 T 28-03-2018 AM393_RS03515 050c0c7c9a416058415a63ae1499df94 359 Gene3D G3DSA:3.40.50.720 1 104 9.3E-12 T 28-03-2018 AM393_RS03515 050c0c7c9a416058415a63ae1499df94 359 SUPERFAMILY SSF51735 1 107 2.06E-13 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS03515 050c0c7c9a416058415a63ae1499df94 359 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 2 106 5.7E-7 T 28-03-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 AM393_RS05945 fa22d800045084f736e02f3899d8c471 400 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 295 308 - T 28-03-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 AM393_RS05945 fa22d800045084f736e02f3899d8c471 400 Pfam PF01494 FAD binding domain 4 346 2.1E-29 T 28-03-2018 IPR002938 FAD-binding domain GO:0071949 AM393_RS05945 fa22d800045084f736e02f3899d8c471 400 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 5 391 5.7E-133 T 28-03-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 AM393_RS05945 fa22d800045084f736e02f3899d8c471 400 Gene3D G3DSA:3.50.50.60 1 365 1.3E-47 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS05945 fa22d800045084f736e02f3899d8c471 400 SUPERFAMILY SSF51905 4 177 8.19E-61 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS05945 fa22d800045084f736e02f3899d8c471 400 SUPERFAMILY SSF51905 268 385 8.19E-61 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS05945 fa22d800045084f736e02f3899d8c471 400 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 281 296 8.6E-20 T 28-03-2018 AM393_RS05945 fa22d800045084f736e02f3899d8c471 400 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 8.6E-20 T 28-03-2018 AM393_RS05945 fa22d800045084f736e02f3899d8c471 400 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 156 171 8.6E-20 T 28-03-2018 AM393_RS05945 fa22d800045084f736e02f3899d8c471 400 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 296 312 8.6E-20 T 28-03-2018 AM393_RS14080 4178d9594ddd9d23b81072f2c9c79ddf 245 SMART SM00382 98 227 7.7E-5 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS14080 4178d9594ddd9d23b81072f2c9c79ddf 245 Pfam PF01695 IstB-like ATP binding protein 70 218 6.5E-18 T 28-03-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 AM393_RS14080 4178d9594ddd9d23b81072f2c9c79ddf 245 SUPERFAMILY SSF52540 64 222 2.77E-22 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS14080 4178d9594ddd9d23b81072f2c9c79ddf 245 PIRSF PIRSF003073 2 245 1.6E-35 T 28-03-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein AM393_RS14080 4178d9594ddd9d23b81072f2c9c79ddf 245 Gene3D G3DSA:3.40.50.300 62 227 5.8E-19 T 28-03-2018 AM393_RS25420 fdf3e6a52b79da83cedbf3e3b1d6dfa2 211 TIGRFAM TIGR01083 nth: endonuclease III 4 194 1.9E-88 T 28-03-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 AM393_RS25420 fdf3e6a52b79da83cedbf3e3b1d6dfa2 211 SMART SM00478 38 185 4.3E-52 T 28-03-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 AM393_RS25420 fdf3e6a52b79da83cedbf3e3b1d6dfa2 211 Pfam PF00633 Helix-hairpin-helix motif 100 127 2.8E-7 T 28-03-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 AM393_RS25420 fdf3e6a52b79da83cedbf3e3b1d6dfa2 211 SUPERFAMILY SSF48150 3 207 2.98E-72 T 28-03-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 AM393_RS25420 fdf3e6a52b79da83cedbf3e3b1d6dfa2 211 SMART SM00525 186 206 1.6E-5 T 28-03-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 AM393_RS25420 fdf3e6a52b79da83cedbf3e3b1d6dfa2 211 PIRSF PIRSF001435 1 210 1.3E-49 T 28-03-2018 AM393_RS25420 fdf3e6a52b79da83cedbf3e3b1d6dfa2 211 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 187 203 - T 28-03-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 AM393_RS25420 fdf3e6a52b79da83cedbf3e3b1d6dfa2 211 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 28-03-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 AM393_RS25420 fdf3e6a52b79da83cedbf3e3b1d6dfa2 211 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 187 203 4.3E-4 T 28-03-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 AM393_RS25420 fdf3e6a52b79da83cedbf3e3b1d6dfa2 211 Hamap MF_00942 Endonuclease III [nth]. 1 209 37.252 T 28-03-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 AM393_RS25420 fdf3e6a52b79da83cedbf3e3b1d6dfa2 211 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 168 9.2E-19 T 28-03-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 AM393_RS25420 fdf3e6a52b79da83cedbf3e3b1d6dfa2 211 Gene3D G3DSA:1.10.340.30 25 116 2.0E-22 T 28-03-2018 AM393_RS25420 fdf3e6a52b79da83cedbf3e3b1d6dfa2 211 Gene3D G3DSA:1.10.1670.10 117 211 1.3E-29 T 28-03-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 AM393_RS11250 7cb35a02a9526dffe530f60de4826f73 332 SUPERFAMILY SSF51556 16 331 2.58E-73 T 28-03-2018 IPR032466 Metal-dependent hydrolase AM393_RS11250 7cb35a02a9526dffe530f60de4826f73 332 Gene3D G3DSA:3.20.20.140 1 332 4.9E-52 T 28-03-2018 AM393_RS11250 7cb35a02a9526dffe530f60de4826f73 332 Pfam PF04909 Amidohydrolase 35 330 5.6E-38 T 28-03-2018 IPR006680 Amidohydrolase-related GO:0016787 AM393_RS25860 3d46c457720577836f6105fc3be190f2 290 Gene3D G3DSA:3.40.190.10 88 178 4.3E-17 T 28-03-2018 AM393_RS25860 3d46c457720577836f6105fc3be190f2 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 8.0E-11 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS25860 3d46c457720577836f6105fc3be190f2 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 8.0E-11 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS25860 3d46c457720577836f6105fc3be190f2 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 8.0E-11 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS25860 3d46c457720577836f6105fc3be190f2 290 SUPERFAMILY SSF53850 88 289 1.69E-29 T 28-03-2018 AM393_RS25860 3d46c457720577836f6105fc3be190f2 290 SUPERFAMILY SSF46785 1 85 1.25E-26 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS25860 3d46c457720577836f6105fc3be190f2 290 Gene3D G3DSA:3.40.190.10 179 269 1.3E-20 T 28-03-2018 AM393_RS25860 3d46c457720577836f6105fc3be190f2 290 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.6E-25 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS25860 3d46c457720577836f6105fc3be190f2 290 Gene3D G3DSA:1.10.10.10 1 83 6.2E-27 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS25860 3d46c457720577836f6105fc3be190f2 290 Pfam PF03466 LysR substrate binding domain 88 289 1.9E-33 T 28-03-2018 IPR005119 LysR, substrate-binding AM393_RS03510 926d0fdce1791fc3ca84a5f2fa991c50 72 Pfam PF07191 zinc-ribbons 4 68 4.1E-28 T 28-03-2018 IPR010807 Protein of unknown function DUF1407 AM393_RS03510 926d0fdce1791fc3ca84a5f2fa991c50 72 Gene3D G3DSA:2.20.25.10 32 68 0.067 T 28-03-2018 AM393_RS03510 926d0fdce1791fc3ca84a5f2fa991c50 72 Gene3D G3DSA:2.20.25.10 3 31 0.0055 T 28-03-2018 AM393_RS03510 926d0fdce1791fc3ca84a5f2fa991c50 72 ProDom PD060428 YFGJ CYTOPLASMIC VP0614 ECS3372 VC0765 YPO2873 Y1359 STY2763A VV0773 1 69 8.0E-25 T 28-03-2018 IPR010807 Protein of unknown function DUF1407 AM393_RS03510 926d0fdce1791fc3ca84a5f2fa991c50 72 SUPERFAMILY SSF161187 1 69 1.57E-28 T 28-03-2018 IPR029037 YfgJ-like AM393_RS19670 9f46c8777b3681b76f2e081313e4fc96 87 ProSitePatterns PS00195 Glutaredoxin active site. 5 20 - T 28-03-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 AM393_RS19670 9f46c8777b3681b76f2e081313e4fc96 87 Gene3D G3DSA:3.40.30.10 1 83 8.5E-22 T 28-03-2018 AM393_RS19670 9f46c8777b3681b76f2e081313e4fc96 87 Pfam PF00462 Glutaredoxin 4 69 2.0E-16 T 28-03-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 AM393_RS19670 9f46c8777b3681b76f2e081313e4fc96 87 TIGRFAM TIGR02183 GRXA: glutaredoxin, GrxA family 2 86 1.1E-51 T 28-03-2018 IPR011902 Glutaredoxin, GrxA GO:0009055|GO:0015035|GO:0045454 AM393_RS19670 9f46c8777b3681b76f2e081313e4fc96 87 PRINTS PR00160 Glutaredoxin signature 3 21 6.0E-12 T 28-03-2018 IPR014025 Glutaredoxin subgroup AM393_RS19670 9f46c8777b3681b76f2e081313e4fc96 87 PRINTS PR00160 Glutaredoxin signature 66 79 6.0E-12 T 28-03-2018 IPR014025 Glutaredoxin subgroup AM393_RS19670 9f46c8777b3681b76f2e081313e4fc96 87 PRINTS PR00160 Glutaredoxin signature 52 65 6.0E-12 T 28-03-2018 IPR014025 Glutaredoxin subgroup AM393_RS19670 9f46c8777b3681b76f2e081313e4fc96 87 SUPERFAMILY SSF52833 4 82 1.69E-20 T 28-03-2018 IPR012336 Thioredoxin-like fold AM393_RS09615 fac545d09d8ada296286fe80bb688a59 397 Gene3D G3DSA:3.40.640.10 98 276 1.8E-32 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM393_RS09615 fac545d09d8ada296286fe80bb688a59 397 TIGRFAM TIGR01822 2am3keto_CoA: glycine C-acetyltransferase 5 396 1.5E-220 T 28-03-2018 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 AM393_RS09615 fac545d09d8ada296286fe80bb688a59 397 Hamap MF_00985 2-amino-3-ketobutyrate coenzyme A ligase [kbl]. 2 394 53.821 T 28-03-2018 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 AM393_RS09615 fac545d09d8ada296286fe80bb688a59 397 Gene3D G3DSA:3.90.1150.10 277 396 6.7E-42 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM393_RS09615 fac545d09d8ada296286fe80bb688a59 397 Gene3D G3DSA:3.90.1150.10 20 97 1.1E-14 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM393_RS09615 fac545d09d8ada296286fe80bb688a59 397 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 240 249 - T 28-03-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 AM393_RS09615 fac545d09d8ada296286fe80bb688a59 397 Pfam PF00155 Aminotransferase class I and II 42 386 1.8E-78 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AM393_RS09615 fac545d09d8ada296286fe80bb688a59 397 SUPERFAMILY SSF53383 4 395 9.11E-126 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM393_RS18415 e744f5761946590e1e23279353fbeb8f 474 Pfam PF04055 Radical SAM superfamily 151 325 7.7E-28 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AM393_RS18415 e744f5761946590e1e23279353fbeb8f 474 Pfam PF01938 TRAM domain 378 440 2.9E-18 T 28-03-2018 IPR002792 TRAM domain AM393_RS18415 e744f5761946590e1e23279353fbeb8f 474 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 4 440 8.8E-221 T 28-03-2018 AM393_RS18415 e744f5761946590e1e23279353fbeb8f 474 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 4 437 1.3E-157 T 28-03-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 AM393_RS18415 e744f5761946590e1e23279353fbeb8f 474 Gene3D G3DSA:3.40.50.280 38 127 0.31 T 28-03-2018 AM393_RS18415 e744f5761946590e1e23279353fbeb8f 474 SMART SM00729 147 367 1.5E-65 T 28-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AM393_RS18415 e744f5761946590e1e23279353fbeb8f 474 Gene3D G3DSA:3.80.30.20 144 381 4.6E-53 T 28-03-2018 IPR023404 Radical SAM, alpha/beta horseshoe AM393_RS18415 e744f5761946590e1e23279353fbeb8f 474 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 3 440 75.03 T 28-03-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 AM393_RS18415 e744f5761946590e1e23279353fbeb8f 474 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 151 171 - T 28-03-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 AM393_RS18415 e744f5761946590e1e23279353fbeb8f 474 Pfam PF00919 Uncharacterized protein family UPF0004 4 104 5.3E-29 T 28-03-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 AM393_RS18415 e744f5761946590e1e23279353fbeb8f 474 SUPERFAMILY SSF102114 127 372 8.5E-64 T 28-03-2018 AM393_RS02615 5e29e862b27bb8aa7737a34134ebef75 252 Gene3D G3DSA:3.40.50.1820 1 252 8.8E-41 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AM393_RS02615 5e29e862b27bb8aa7737a34134ebef75 252 Pfam PF12697 Alpha/beta hydrolase family 17 243 1.3E-15 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM393_RS02615 5e29e862b27bb8aa7737a34134ebef75 252 TIGRFAM TIGR03695 menH_SHCHC: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase 15 250 4.2E-79 T 28-03-2018 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 AM393_RS02615 5e29e862b27bb8aa7737a34134ebef75 252 SUPERFAMILY SSF53474 7 251 5.77E-40 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AM393_RS02615 5e29e862b27bb8aa7737a34134ebef75 252 Hamap MF_01660 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [menH]. 14 251 33.826 T 28-03-2018 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 AM393_RS12400 7d68e85c9dad52d3d5e56debed92f022 378 SUPERFAMILY SSF51338 1 50 3.46E-12 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM393_RS12400 7d68e85c9dad52d3d5e56debed92f022 378 SUPERFAMILY SSF51338 345 377 3.46E-12 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM393_RS12400 7d68e85c9dad52d3d5e56debed92f022 378 PIRSF PIRSF038971 1 378 1.6E-153 T 28-03-2018 IPR012696 Phosphonate metabolism PhnM GO:0019700 KEGG: 00440+3.6.1.63|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 AM393_RS12400 7d68e85c9dad52d3d5e56debed92f022 378 Gene3D G3DSA:2.30.40.10 1 53 4.4E-7 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM393_RS12400 7d68e85c9dad52d3d5e56debed92f022 378 Gene3D G3DSA:3.20.20.140 54 299 3.3E-9 T 28-03-2018 AM393_RS12400 7d68e85c9dad52d3d5e56debed92f022 378 SUPERFAMILY SSF51556 50 345 1.26E-20 T 28-03-2018 IPR032466 Metal-dependent hydrolase AM393_RS12400 7d68e85c9dad52d3d5e56debed92f022 378 Pfam PF07969 Amidohydrolase family 215 378 4.1E-12 T 28-03-2018 IPR013108 Amidohydrolase 3 AM393_RS12400 7d68e85c9dad52d3d5e56debed92f022 378 Gene3D G3DSA:2.30.40.10 300 378 4.3E-13 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM393_RS12400 7d68e85c9dad52d3d5e56debed92f022 378 TIGRFAM TIGR02318 phosphono_phnM: phosphonate metabolism protein PhnM 2 378 4.3E-162 T 28-03-2018 IPR012696 Phosphonate metabolism PhnM GO:0019700 KEGG: 00440+3.6.1.63|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 AM393_RS02045 2ee1ec7fe619e19d629cc90e01c48e55 245 SUPERFAMILY SSF161098 44 233 1.7E-31 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS02045 2ee1ec7fe619e19d629cc90e01c48e55 245 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 68 240 1.5E-21 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS02045 2ee1ec7fe619e19d629cc90e01c48e55 245 Gene3D G3DSA:1.10.3720.10 7 244 4.0E-26 T 28-03-2018 AM393_RS14900 51dc92b371e303273879c98bbbf2eebc 64 Gene3D G3DSA:3.30.50.10 2 60 8.6E-29 T 28-03-2018 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 AM393_RS14900 51dc92b371e303273879c98bbbf2eebc 64 SUPERFAMILY SSF57716 3 62 2.21E-23 T 28-03-2018 AM393_RS14900 51dc92b371e303273879c98bbbf2eebc 64 Pfam PF03884 DNA gyrase inhibitor YacG 7 57 2.8E-26 T 28-03-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 AM393_RS14900 51dc92b371e303273879c98bbbf2eebc 64 Hamap MF_00649 DNA gyrase inhibitor YacG [yacG]. 3 59 19.447 T 28-03-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 AM393_RS08615 53d75447ef8206d1e060771b2e992022 540 SUPERFAMILY SSF68923 9 227 1.59E-90 T 28-03-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 AM393_RS08615 53d75447ef8206d1e060771b2e992022 540 SUPERFAMILY SSF53795 229 539 1.49E-129 T 28-03-2018 AM393_RS08615 53d75447ef8206d1e060771b2e992022 540 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 4 539 2.1E-292 T 28-03-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 AM393_RS08615 53d75447ef8206d1e060771b2e992022 540 PIRSF PIRSF006294 3 540 8.2E-233 T 28-03-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 AM393_RS08615 53d75447ef8206d1e060771b2e992022 540 Pfam PF01293 Phosphoenolpyruvate carboxykinase 22 491 1.9E-211 T 28-03-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 AM393_RS08615 53d75447ef8206d1e060771b2e992022 540 Gene3D G3DSA:3.90.228.20 228 307 3.4E-28 T 28-03-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 AM393_RS08615 53d75447ef8206d1e060771b2e992022 540 Gene3D G3DSA:3.90.228.20 308 538 2.2E-93 T 28-03-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 AM393_RS08615 53d75447ef8206d1e060771b2e992022 540 ProSitePatterns PS00532 Phosphoenolpyruvate carboxykinase (ATP) signature. 265 280 - T 28-03-2018 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 AM393_RS08615 53d75447ef8206d1e060771b2e992022 540 Hamap MF_00453 Phosphoenolpyruvate carboxykinase (ATP) [pckA]. 16 538 56.088 T 28-03-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 AM393_RS08615 53d75447ef8206d1e060771b2e992022 540 Gene3D G3DSA:3.40.449.10 23 227 5.4E-77 T 28-03-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 AM393_RS12835 22ae7e11062c0e0e3f70bae55f810112 432 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 432 217.669 T 28-03-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AM393_RS12835 22ae7e11062c0e0e3f70bae55f810112 432 Gene3D G3DSA:3.90.170.10 267 432 2.2E-66 T 28-03-2018 AM393_RS12835 22ae7e11062c0e0e3f70bae55f810112 432 Gene3D G3DSA:3.40.440.10 1 151 1.3E-53 T 28-03-2018 AM393_RS12835 22ae7e11062c0e0e3f70bae55f810112 432 Gene3D G3DSA:3.40.440.10 152 266 2.3E-27 T 28-03-2018 AM393_RS12835 22ae7e11062c0e0e3f70bae55f810112 432 SMART SM00788 4 425 3.1E-301 T 28-03-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AM393_RS12835 22ae7e11062c0e0e3f70bae55f810112 432 SUPERFAMILY SSF52540 3 431 3.93E-180 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS12835 22ae7e11062c0e0e3f70bae55f810112 432 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 11 18 - T 28-03-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AM393_RS12835 22ae7e11062c0e0e3f70bae55f810112 432 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 430 9.6E-207 T 28-03-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AM393_RS12835 22ae7e11062c0e0e3f70bae55f810112 432 Pfam PF00709 Adenylosuccinate synthetase 5 423 1.3E-177 T 28-03-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AM393_RS12835 22ae7e11062c0e0e3f70bae55f810112 432 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 28-03-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AM393_RS21755 36bf098ce526732fdaa09ebfaa00d645 73 Pfam PF13488 Glycine zipper 36 73 3.7E-7 T 28-03-2018 AM393_RS18675 8f0365432afde132c36af60e4493e925 935 PIRSF PIRSF000157 1 934 0.0 T 28-03-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 AM393_RS18675 8f0365432afde132c36af60e4493e925 935 SMART SM00861 593 786 2.4E-65 T 28-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AM393_RS18675 8f0365432afde132c36af60e4493e925 935 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 12 50 1.7E-15 T 28-03-2018 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 AM393_RS18675 8f0365432afde132c36af60e4493e925 935 SUPERFAMILY SSF52518 576 793 1.68E-52 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold AM393_RS18675 8f0365432afde132c36af60e4493e925 935 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 14 932 0.0 T 28-03-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 AM393_RS18675 8f0365432afde132c36af60e4493e925 935 Gene3D G3DSA:3.40.50.970 593 802 7.1E-58 T 28-03-2018 AM393_RS18675 8f0365432afde132c36af60e4493e925 935 Pfam PF00676 Dehydrogenase E1 component 220 506 3.9E-48 T 28-03-2018 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 Reactome: R-HSA-389661 AM393_RS18675 8f0365432afde132c36af60e4493e925 935 Gene3D G3DSA:3.40.50.970 167 519 1.8E-92 T 28-03-2018 AM393_RS18675 8f0365432afde132c36af60e4493e925 935 Pfam PF02779 Transketolase, pyrimidine binding domain 593 787 5.1E-67 T 28-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AM393_RS18675 8f0365432afde132c36af60e4493e925 935 SUPERFAMILY SSF52518 120 548 5.3E-89 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold AM393_RS18675 8f0365432afde132c36af60e4493e925 935 Gene3D G3DSA:1.10.287.1150 83 166 6.3E-23 T 28-03-2018 AM393_RS18675 8f0365432afde132c36af60e4493e925 935 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 790 932 6.2E-54 T 28-03-2018 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 AM393_RS05850 d983cabeed7c25a18014a77e43299a08 577 Pfam PF02272 DHHA1 domain 322 452 3.7E-27 T 28-03-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 AM393_RS05850 d983cabeed7c25a18014a77e43299a08 577 Gene3D G3DSA:3.90.1640.10 52 245 5.0E-22 T 28-03-2018 AM393_RS05850 d983cabeed7c25a18014a77e43299a08 577 Pfam PF01368 DHH family 74 201 4.5E-8 T 28-03-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 AM393_RS05850 d983cabeed7c25a18014a77e43299a08 577 SUPERFAMILY SSF64182 48 465 3.53E-117 T 28-03-2018 AM393_RS05850 d983cabeed7c25a18014a77e43299a08 577 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 24 573 2.0E-166 T 28-03-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 AM393_RS00810 185ba5024be4155028d96e7d1245ad95 520 Gene3D G3DSA:1.20.1250.20 18 229 9.9E-16 T 28-03-2018 AM393_RS00810 185ba5024be4155028d96e7d1245ad95 520 Gene3D G3DSA:1.20.1250.20 236 460 2.3E-10 T 28-03-2018 AM393_RS00810 185ba5024be4155028d96e7d1245ad95 520 SUPERFAMILY SSF103473 23 454 9.55E-30 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS00810 185ba5024be4155028d96e7d1245ad95 520 Pfam PF13347 MFS/sugar transport protein 25 458 6.1E-55 T 28-03-2018 AM393_RS26460 7c81f545ec6c6a379876b384da5b659d 249 Pfam PF00005 ABC transporter 19 162 2.0E-22 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS26460 7c81f545ec6c6a379876b384da5b659d 249 Gene3D G3DSA:3.40.50.300 12 239 5.5E-45 T 28-03-2018 AM393_RS26460 7c81f545ec6c6a379876b384da5b659d 249 SMART SM00382 25 210 1.8E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS26460 7c81f545ec6c6a379876b384da5b659d 249 Hamap MF_01005 Vitamin B12 import ATP-binding protein BtuD [btuD]. 4 248 44.474 T 28-03-2018 IPR023693 ABC transporter, vitamin B12, BtuD GO:0005524|GO:0015889|GO:0016887 AM393_RS26460 7c81f545ec6c6a379876b384da5b659d 249 ProSitePatterns PS00211 ABC transporters family signature. 127 141 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS26460 7c81f545ec6c6a379876b384da5b659d 249 SUPERFAMILY SSF52540 18 225 4.24E-46 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS04070 f59ddd316ca62224d6c6c6aa662b97e7 120 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 55 100 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM393_RS04070 f59ddd316ca62224d6c6c6aa662b97e7 120 Gene3D G3DSA:1.10.10.60 57 120 5.4E-12 T 28-03-2018 AM393_RS04070 f59ddd316ca62224d6c6c6aa662b97e7 120 SUPERFAMILY SSF46689 58 108 9.86E-12 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS04070 f59ddd316ca62224d6c6c6aa662b97e7 120 SUPERFAMILY SSF46689 6 55 6.07E-13 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS04070 f59ddd316ca62224d6c6c6aa662b97e7 120 Gene3D G3DSA:1.10.10.60 2 56 4.2E-16 T 28-03-2018 AM393_RS04070 f59ddd316ca62224d6c6c6aa662b97e7 120 SMART SM00342 21 104 4.7E-29 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM393_RS04070 f59ddd316ca62224d6c6c6aa662b97e7 120 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 88 104 1.1E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM393_RS04070 f59ddd316ca62224d6c6c6aa662b97e7 120 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 73 88 1.1E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM393_RS04070 f59ddd316ca62224d6c6c6aa662b97e7 120 Pfam PF12833 Helix-turn-helix domain 27 105 5.5E-23 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM393_RS17165 b75c8a52a88c8292736b26ed2bde2229 250 SMART SM00635 162 245 5.9E-8 T 28-03-2018 IPR003343 Bacterial Ig-like, group 2 AM393_RS17165 b75c8a52a88c8292736b26ed2bde2229 250 SUPERFAMILY SSF49373 161 246 4.47E-5 T 28-03-2018 IPR008964 Invasin/intimin cell-adhesion fragments AM393_RS17165 b75c8a52a88c8292736b26ed2bde2229 250 Pfam PF02368 Bacterial Ig-like domain (group 2) 163 243 1.2E-7 T 28-03-2018 IPR003343 Bacterial Ig-like, group 2 AM393_RS17165 b75c8a52a88c8292736b26ed2bde2229 250 Gene3D G3DSA:2.60.40.1080 158 250 2.4E-12 T 28-03-2018 AM393_RS24300 909f7dc33618290017c048b073c4273d 221 SUPERFAMILY SSF161098 14 203 3.79E-41 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS24300 909f7dc33618290017c048b073c4273d 221 Gene3D G3DSA:1.10.3720.10 2 218 6.8E-38 T 28-03-2018 AM393_RS24300 909f7dc33618290017c048b073c4273d 221 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 14 111 2.8E-26 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AM393_RS24300 909f7dc33618290017c048b073c4273d 221 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 35 208 2.5E-18 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS05475 44300424c0dae36b61afe526fc37d908 257 SUPERFAMILY SSF46785 10 79 6.13E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS05475 44300424c0dae36b61afe526fc37d908 257 Gene3D G3DSA:1.20.120.530 97 241 7.6E-23 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AM393_RS05475 44300424c0dae36b61afe526fc37d908 257 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 35 49 1.7E-8 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM393_RS05475 44300424c0dae36b61afe526fc37d908 257 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 49 65 1.7E-8 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM393_RS05475 44300424c0dae36b61afe526fc37d908 257 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 75 4.9E-22 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM393_RS05475 44300424c0dae36b61afe526fc37d908 257 Pfam PF07729 FCD domain 98 224 7.7E-20 T 28-03-2018 IPR011711 GntR, C-terminal AM393_RS05475 44300424c0dae36b61afe526fc37d908 257 SUPERFAMILY SSF48008 97 233 1.99E-22 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AM393_RS05475 44300424c0dae36b61afe526fc37d908 257 SMART SM00895 98 225 1.0E-16 T 28-03-2018 IPR011711 GntR, C-terminal AM393_RS05475 44300424c0dae36b61afe526fc37d908 257 Gene3D G3DSA:1.10.10.10 7 76 1.3E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS05475 44300424c0dae36b61afe526fc37d908 257 SMART SM00345 16 75 2.4E-22 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM393_RS10160 c1c8ea734c6d93b7de20a1aa0480db31 397 Gene3D G3DSA:1.20.1250.20 1 207 2.3E-24 T 28-03-2018 AM393_RS10160 c1c8ea734c6d93b7de20a1aa0480db31 397 Pfam PF07690 Major Facilitator Superfamily 25 342 3.2E-29 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS10160 c1c8ea734c6d93b7de20a1aa0480db31 397 Hamap MF_01189 Purine ribonucleoside efflux pump NepI [nepI]. 1 394 41.185 T 28-03-2018 IPR023680 Purine ribonucleoside efflux pump, NepI GO:0015211|GO:0015860|GO:0016021 AM393_RS10160 c1c8ea734c6d93b7de20a1aa0480db31 397 SUPERFAMILY SSF103473 8 390 3.53E-50 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS10160 c1c8ea734c6d93b7de20a1aa0480db31 397 Gene3D G3DSA:1.20.1250.20 208 394 2.1E-15 T 28-03-2018 AM393_RS09220 887f81a431ce1dcc571426dd14bc1e51 158 Gene3D G3DSA:3.30.1380.20 6 143 1.8E-4 T 28-03-2018 AM393_RS09220 887f81a431ce1dcc571426dd14bc1e51 158 Pfam PF03500 Cellulose synthase subunit D 45 135 1.9E-10 T 28-03-2018 IPR022798 Cellulose synthase subunit D, bacterial AM393_RS06715 07f7144448cd7927a6c69ff63af63606 275 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 123 140 - T 28-03-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 AM393_RS06715 07f7144448cd7927a6c69ff63af63606 275 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 41 58 - T 28-03-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 AM393_RS06715 07f7144448cd7927a6c69ff63af63606 275 SUPERFAMILY SSF51430 5 268 5.63E-89 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM393_RS06715 07f7144448cd7927a6c69ff63af63606 275 PIRSF PIRSF000097 1 270 5.8E-95 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM393_RS06715 07f7144448cd7927a6c69ff63af63606 275 PRINTS PR00069 Aldo-keto reductase signature 157 186 7.9E-45 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM393_RS06715 07f7144448cd7927a6c69ff63af63606 275 PRINTS PR00069 Aldo-keto reductase signature 91 109 7.9E-45 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM393_RS06715 07f7144448cd7927a6c69ff63af63606 275 PRINTS PR00069 Aldo-keto reductase signature 123 140 7.9E-45 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM393_RS06715 07f7144448cd7927a6c69ff63af63606 275 PRINTS PR00069 Aldo-keto reductase signature 37 61 7.9E-45 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM393_RS06715 07f7144448cd7927a6c69ff63af63606 275 PRINTS PR00069 Aldo-keto reductase signature 196 220 7.9E-45 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM393_RS06715 07f7144448cd7927a6c69ff63af63606 275 Gene3D G3DSA:3.20.20.100 2 274 2.0E-91 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM393_RS06715 07f7144448cd7927a6c69ff63af63606 275 ProSitePatterns PS00063 Aldo/keto reductase family putative active site signature. 229 244 - T 28-03-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 AM393_RS06715 07f7144448cd7927a6c69ff63af63606 275 Pfam PF00248 Aldo/keto reductase family 18 260 3.1E-48 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM393_RS14135 3e15b2919baae0a7816e5532bfa15bc3 262 PRINTS PR01714 Ferric iron reductase signature 125 139 2.2E-60 T 28-03-2018 IPR008090 Ferric iron reductase AM393_RS14135 3e15b2919baae0a7816e5532bfa15bc3 262 PRINTS PR01714 Ferric iron reductase signature 93 108 2.2E-60 T 28-03-2018 IPR008090 Ferric iron reductase AM393_RS14135 3e15b2919baae0a7816e5532bfa15bc3 262 PRINTS PR01714 Ferric iron reductase signature 56 73 2.2E-60 T 28-03-2018 IPR008090 Ferric iron reductase AM393_RS14135 3e15b2919baae0a7816e5532bfa15bc3 262 PRINTS PR01714 Ferric iron reductase signature 173 189 2.2E-60 T 28-03-2018 IPR008090 Ferric iron reductase AM393_RS14135 3e15b2919baae0a7816e5532bfa15bc3 262 PRINTS PR01714 Ferric iron reductase signature 197 212 2.2E-60 T 28-03-2018 IPR008090 Ferric iron reductase AM393_RS14135 3e15b2919baae0a7816e5532bfa15bc3 262 PRINTS PR01714 Ferric iron reductase signature 241 259 2.2E-60 T 28-03-2018 IPR008090 Ferric iron reductase AM393_RS14135 3e15b2919baae0a7816e5532bfa15bc3 262 PRINTS PR01714 Ferric iron reductase signature 16 32 2.2E-60 T 28-03-2018 IPR008090 Ferric iron reductase AM393_RS14135 3e15b2919baae0a7816e5532bfa15bc3 262 PRINTS PR01714 Ferric iron reductase signature 215 231 2.2E-60 T 28-03-2018 IPR008090 Ferric iron reductase AM393_RS14135 3e15b2919baae0a7816e5532bfa15bc3 262 Pfam PF11575 FhuF 2Fe-2S C-terminal domain 241 261 2.4E-7 T 28-03-2018 IPR024726 Ferric iron reductase, C-terminal GO:0051537 AM393_RS14135 3e15b2919baae0a7816e5532bfa15bc3 262 TIGRFAM TIGR03951 Fe_III_red_FhuF: siderophore-iron reductase FhuF 87 262 2.3E-68 T 28-03-2018 IPR008090 Ferric iron reductase AM393_RS14135 3e15b2919baae0a7816e5532bfa15bc3 262 Pfam PF06276 Ferric iron reductase FhuF-like transporter 93 238 3.0E-31 T 28-03-2018 IPR022770 Ferric iron reductase FhuF domain AM393_RS14475 e990312f1c010ee0a16dbdf4f5687f2c 309 Pfam PF03466 LysR substrate binding domain 92 296 4.1E-40 T 28-03-2018 IPR005119 LysR, substrate-binding AM393_RS14475 e990312f1c010ee0a16dbdf4f5687f2c 309 Gene3D G3DSA:3.40.190.10 178 265 2.2E-26 T 28-03-2018 AM393_RS14475 e990312f1c010ee0a16dbdf4f5687f2c 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 65 6.4E-19 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS14475 e990312f1c010ee0a16dbdf4f5687f2c 309 SUPERFAMILY SSF53850 93 300 7.76E-43 T 28-03-2018 AM393_RS14475 e990312f1c010ee0a16dbdf4f5687f2c 309 Gene3D G3DSA:1.10.10.10 4 86 2.1E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS14475 e990312f1c010ee0a16dbdf4f5687f2c 309 Gene3D G3DSA:3.40.190.10 91 177 2.1E-10 T 28-03-2018 AM393_RS14475 e990312f1c010ee0a16dbdf4f5687f2c 309 SUPERFAMILY SSF46785 7 113 1.97E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS13885 e82e5f2bffaf278b7e4135e8b8c084f6 520 PIRSF PIRSF000331 11 501 4.4E-204 T 28-03-2018 IPR004925 HpaB/PvcC/4-BUDH AM393_RS13885 e82e5f2bffaf278b7e4135e8b8c084f6 520 Gene3D G3DSA:1.20.140.10 296 493 3.2E-65 T 28-03-2018 AM393_RS13885 e82e5f2bffaf278b7e4135e8b8c084f6 520 Gene3D G3DSA:2.40.110.10 152 283 1.0E-12 T 28-03-2018 AM393_RS13885 e82e5f2bffaf278b7e4135e8b8c084f6 520 SUPERFAMILY SSF47203 272 494 1.17E-44 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AM393_RS13885 e82e5f2bffaf278b7e4135e8b8c084f6 520 PIRSF PIRSF500125 1 518 5.6E-289 T 28-03-2018 IPR024677 4-HPA 3-monooxygenase large component/Pyoverdin chromophore biosynthetic protein AM393_RS13885 e82e5f2bffaf278b7e4135e8b8c084f6 520 Pfam PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal 288 489 1.5E-64 T 28-03-2018 IPR024719 HpaB/PvcC/4-BUDH C-terminal AM393_RS13885 e82e5f2bffaf278b7e4135e8b8c084f6 520 SUPERFAMILY SSF56645 13 282 4.12E-83 T 28-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AM393_RS13885 e82e5f2bffaf278b7e4135e8b8c084f6 520 TIGRFAM TIGR02310 HpaB-2: 4-hydroxyphenylacetate 3-monooxygenase, oxygenase component 2 520 0.0 T 28-03-2018 IPR012688 4-HPA 3-monooxygenase large component, gammaproteobacteria GO:0010124|GO:0016712|GO:0050660 AM393_RS13885 e82e5f2bffaf278b7e4135e8b8c084f6 520 Gene3D G3DSA:1.10.3140.10 14 151 3.5E-52 T 28-03-2018 AM393_RS13885 e82e5f2bffaf278b7e4135e8b8c084f6 520 Pfam PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal 15 281 1.1E-93 T 28-03-2018 IPR024674 HpaB/PvcC/4-BUDH N-terminal AM393_RS13425 b714f1e6942e12e72a969e91cb285ce8 339 SMART SM00829 13 335 5.7E-7 T 28-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AM393_RS13425 b714f1e6942e12e72a969e91cb285ce8 339 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 62 76 - T 28-03-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 AM393_RS13425 b714f1e6942e12e72a969e91cb285ce8 339 SUPERFAMILY SSF50129 7 164 5.78E-42 T 28-03-2018 IPR011032 GroES-like AM393_RS13425 b714f1e6942e12e72a969e91cb285ce8 339 SUPERFAMILY SSF51735 142 305 1.43E-38 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS13425 b714f1e6942e12e72a969e91cb285ce8 339 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 137 6.6E-25 T 28-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AM393_RS13425 b714f1e6942e12e72a969e91cb285ce8 339 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 172 199 - T 28-03-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 AM393_RS13425 b714f1e6942e12e72a969e91cb285ce8 339 Gene3D G3DSA:3.90.180.10 2 184 2.0E-47 T 28-03-2018 AM393_RS13425 b714f1e6942e12e72a969e91cb285ce8 339 Pfam PF00107 Zinc-binding dehydrogenase 179 299 8.3E-23 T 28-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AM393_RS13425 b714f1e6942e12e72a969e91cb285ce8 339 Gene3D G3DSA:3.40.50.20 272 336 0.16 T 28-03-2018 AM393_RS13425 b714f1e6942e12e72a969e91cb285ce8 339 Gene3D G3DSA:3.40.50.20 185 253 6.4E-18 T 28-03-2018 AM393_RS17950 ffd26e82d14fa69409e986d085785359 316 Gene3D G3DSA:1.10.10.60 1 54 2.1E-14 T 28-03-2018 AM393_RS17950 ffd26e82d14fa69409e986d085785359 316 Gene3D G3DSA:3.40.50.1360 60 314 1.8E-37 T 28-03-2018 AM393_RS17950 ffd26e82d14fa69409e986d085785359 316 Pfam PF04198 Putative sugar-binding domain 63 314 2.5E-63 T 28-03-2018 IPR007324 Sugar-binding domain, putative GO:0030246 AM393_RS17950 ffd26e82d14fa69409e986d085785359 316 SUPERFAMILY SSF100950 63 313 4.44E-66 T 28-03-2018 AM393_RS14830 cae0b7c9f4699a1db2949ba5399b14d2 452 Pfam PF02875 Mur ligase family, glutamate ligase domain 313 391 4.5E-14 T 28-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AM393_RS14830 cae0b7c9f4699a1db2949ba5399b14d2 452 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 29 446 1.4E-141 T 28-03-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM393_RS14830 cae0b7c9f4699a1db2949ba5399b14d2 452 Pfam PF08245 Mur ligase middle domain 106 292 1.9E-50 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AM393_RS14830 cae0b7c9f4699a1db2949ba5399b14d2 452 Gene3D G3DSA:3.90.190.20 304 451 2.0E-38 T 28-03-2018 AM393_RS14830 cae0b7c9f4699a1db2949ba5399b14d2 452 Pfam PF01225 Mur ligase family, catalytic domain 24 92 8.7E-12 T 28-03-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 AM393_RS14830 cae0b7c9f4699a1db2949ba5399b14d2 452 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 4 447 34.058 T 28-03-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM393_RS14830 cae0b7c9f4699a1db2949ba5399b14d2 452 SUPERFAMILY SSF53244 313 446 3.97E-36 T 28-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AM393_RS14830 cae0b7c9f4699a1db2949ba5399b14d2 452 Gene3D G3DSA:3.40.1390.10 1 89 2.6E-30 T 28-03-2018 AM393_RS14830 cae0b7c9f4699a1db2949ba5399b14d2 452 SUPERFAMILY SSF53623 101 310 8.11E-59 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AM393_RS14830 cae0b7c9f4699a1db2949ba5399b14d2 452 SUPERFAMILY SSF63418 1 97 9.29E-29 T 28-03-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 AM393_RS14830 cae0b7c9f4699a1db2949ba5399b14d2 452 Gene3D G3DSA:3.40.1190.10 90 303 1.4E-58 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AM393_RS09750 d9982b1d0ad1f255b524539e7aac2e97 566 Gene3D G3DSA:3.40.1130.10 29 279 7.7E-25 T 28-03-2018 AM393_RS09750 d9982b1d0ad1f255b524539e7aac2e97 566 Pfam PF13444 Acetyltransferase (GNAT) domain 325 426 7.2E-18 T 28-03-2018 AM393_RS09750 d9982b1d0ad1f255b524539e7aac2e97 566 SUPERFAMILY SSF69593 68 263 7.19E-14 T 28-03-2018 AM393_RS09750 d9982b1d0ad1f255b524539e7aac2e97 566 Pfam PF01553 Acyltransferase 68 194 1.2E-6 T 28-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AM393_RS09750 d9982b1d0ad1f255b524539e7aac2e97 566 SUPERFAMILY SSF55729 306 447 3.39E-20 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM393_RS09750 d9982b1d0ad1f255b524539e7aac2e97 566 Gene3D G3DSA:3.40.630.30 305 456 5.2E-19 T 28-03-2018 AM393_RS26520 fde9fa85e2bb35caa2b2d6f368888a0a 118 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 28-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS26520 fde9fa85e2bb35caa2b2d6f368888a0a 118 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 72 4.0E-14 T 28-03-2018 AM393_RS26520 fde9fa85e2bb35caa2b2d6f368888a0a 118 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 31.068 T 28-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS26520 fde9fa85e2bb35caa2b2d6f368888a0a 118 SUPERFAMILY SSF74731 3 117 2.62E-50 T 28-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS26520 fde9fa85e2bb35caa2b2d6f368888a0a 118 Pfam PF00453 Ribosomal protein L20 3 109 5.2E-49 T 28-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS26520 fde9fa85e2bb35caa2b2d6f368888a0a 118 Gene3D G3DSA:1.10.1900.20 55 116 2.4E-29 T 28-03-2018 IPR035566 Ribosomal protein L20 C-terminal domain Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS26520 fde9fa85e2bb35caa2b2d6f368888a0a 118 PRINTS PR00062 Ribosomal protein L20 signature 75 101 2.4E-42 T 28-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS26520 fde9fa85e2bb35caa2b2d6f368888a0a 118 PRINTS PR00062 Ribosomal protein L20 signature 42 71 2.4E-42 T 28-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS26520 fde9fa85e2bb35caa2b2d6f368888a0a 118 PRINTS PR00062 Ribosomal protein L20 signature 12 41 2.4E-42 T 28-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS26520 fde9fa85e2bb35caa2b2d6f368888a0a 118 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 5.3E-53 T 28-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS09535 6d1aaf75e388997a4ee686aa5e0d848a 74 SUPERFAMILY SSF46575 15 67 1.06E-6 T 28-03-2018 AM393_RS09535 6d1aaf75e388997a4ee686aa5e0d848a 74 Gene3D G3DSA:1.20.970.20 14 63 1.3E-19 T 28-03-2018 AM393_RS04930 22beeada280b191219d55308ae2037a6 446 Gene3D G3DSA:3.30.390.10 1 140 1.1E-29 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM393_RS04930 22beeada280b191219d55308ae2037a6 446 SMART SM00922 185 285 2.1E-15 T 28-03-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal AM393_RS04930 22beeada280b191219d55308ae2037a6 446 Pfam PF13378 Enolase C-terminal domain-like 189 405 1.4E-35 T 28-03-2018 IPR029065 Enolase C-terminal domain-like AM393_RS04930 22beeada280b191219d55308ae2037a6 446 SUPERFAMILY SSF51604 139 446 6.4E-79 T 28-03-2018 IPR029065 Enolase C-terminal domain-like AM393_RS04930 22beeada280b191219d55308ae2037a6 446 SUPERFAMILY SSF54826 7 137 3.71E-30 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM393_RS04930 22beeada280b191219d55308ae2037a6 446 Gene3D G3DSA:3.20.20.120 141 412 4.1E-48 T 28-03-2018 IPR029065 Enolase C-terminal domain-like AM393_RS04930 22beeada280b191219d55308ae2037a6 446 TIGRFAM TIGR03247 glucar-dehydr: glucarate dehydratase 6 446 8.4E-268 T 28-03-2018 IPR017653 Glucarate dehydratase GO:0000287|GO:0008872|GO:0019394 KEGG: 00053+4.2.1.40|MetaCyc: PWY-6499 AM393_RS08285 ad144132a2d1365c3117af3fa157e542 63 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 28-03-2018 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM393_RS08285 ad144132a2d1365c3117af3fa157e542 63 Gene3D G3DSA:1.10.287.310 1 63 1.9E-22 T 28-03-2018 AM393_RS08285 ad144132a2d1365c3117af3fa157e542 63 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 18.849 T 28-03-2018 IPR001854 Ribosomal protein L29/L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM393_RS08285 ad144132a2d1365c3117af3fa157e542 63 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 1.6E-22 T 28-03-2018 IPR001854 Ribosomal protein L29/L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM393_RS08285 ad144132a2d1365c3117af3fa157e542 63 SUPERFAMILY SSF46561 1 61 5.23E-22 T 28-03-2018 IPR001854 Ribosomal protein L29/L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM393_RS08285 ad144132a2d1365c3117af3fa157e542 63 Pfam PF00831 Ribosomal L29 protein 4 60 2.9E-23 T 28-03-2018 IPR001854 Ribosomal protein L29/L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM393_RS10860 534c1cf8660415afdd6dfdc8eb6181ec 421 PRINTS PR00174 LacY proton/sugar symporter family signature 265 286 1.7E-99 T 28-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 AM393_RS10860 534c1cf8660415afdd6dfdc8eb6181ec 421 PRINTS PR00174 LacY proton/sugar symporter family signature 320 339 1.7E-99 T 28-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 AM393_RS10860 534c1cf8660415afdd6dfdc8eb6181ec 421 PRINTS PR00174 LacY proton/sugar symporter family signature 289 315 1.7E-99 T 28-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 AM393_RS10860 534c1cf8660415afdd6dfdc8eb6181ec 421 PRINTS PR00174 LacY proton/sugar symporter family signature 219 247 1.7E-99 T 28-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 AM393_RS10860 534c1cf8660415afdd6dfdc8eb6181ec 421 PRINTS PR00174 LacY proton/sugar symporter family signature 108 130 1.7E-99 T 28-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 AM393_RS10860 534c1cf8660415afdd6dfdc8eb6181ec 421 PRINTS PR00174 LacY proton/sugar symporter family signature 150 168 1.7E-99 T 28-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 AM393_RS10860 534c1cf8660415afdd6dfdc8eb6181ec 421 PRINTS PR00174 LacY proton/sugar symporter family signature 351 371 1.7E-99 T 28-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 AM393_RS10860 534c1cf8660415afdd6dfdc8eb6181ec 421 PRINTS PR00174 LacY proton/sugar symporter family signature 73 102 1.7E-99 T 28-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 AM393_RS10860 534c1cf8660415afdd6dfdc8eb6181ec 421 Gene3D G3DSA:1.20.1250.20 9 204 1.4E-23 T 28-03-2018 AM393_RS10860 534c1cf8660415afdd6dfdc8eb6181ec 421 Pfam PF01306 LacY proton/sugar symporter 9 410 8.0E-195 T 28-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 AM393_RS10860 534c1cf8660415afdd6dfdc8eb6181ec 421 TIGRFAM TIGR00882 2A0105: oligosaccharide:H+ symporter 11 405 1.6E-200 T 28-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 AM393_RS10860 534c1cf8660415afdd6dfdc8eb6181ec 421 SUPERFAMILY SSF103473 9 410 2.75E-50 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS10860 534c1cf8660415afdd6dfdc8eb6181ec 421 ProSitePatterns PS00896 LacY family proton/sugar symporters signature 1. 69 83 - T 28-03-2018 IPR018457 LacY/RafB permease family, conserved site GO:0006810|GO:0016020 AM393_RS10860 534c1cf8660415afdd6dfdc8eb6181ec 421 ProSitePatterns PS00897 LacY family proton/sugar symporters signature 2. 285 299 - T 28-03-2018 IPR018457 LacY/RafB permease family, conserved site GO:0006810|GO:0016020 AM393_RS10860 534c1cf8660415afdd6dfdc8eb6181ec 421 Gene3D G3DSA:1.20.1250.20 211 418 1.4E-22 T 28-03-2018 AM393_RS24640 8ec29fb7d5ff711e35510019160df2d0 426 Pfam PF02378 Phosphotransferase system, EIIC 30 346 4.8E-39 T 28-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AM393_RS24640 8ec29fb7d5ff711e35510019160df2d0 426 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 17 421 1.1E-85 T 28-03-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 AM393_RS24640 8ec29fb7d5ff711e35510019160df2d0 426 PIRSF PIRSF006351 1 425 1.1E-98 T 28-03-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 AM393_RS13610 2b1e3900e389ed71f5082c10281a4d81 419 Gene3D G3DSA:3.90.660.20 48 361 3.5E-35 T 28-03-2018 AM393_RS13610 2b1e3900e389ed71f5082c10281a4d81 419 Pfam PF01593 Flavin containing amine oxidoreductase 10 267 3.9E-18 T 28-03-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 AM393_RS13610 2b1e3900e389ed71f5082c10281a4d81 419 Gene3D G3DSA:3.40.50.720 1 47 6.8E-6 T 28-03-2018 AM393_RS13610 2b1e3900e389ed71f5082c10281a4d81 419 SUPERFAMILY SSF51905 382 413 2.07E-52 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS13610 2b1e3900e389ed71f5082c10281a4d81 419 SUPERFAMILY SSF51905 1 301 2.07E-52 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS26525 fe1a8a3a51c56dbf0860aac70e1d7bd7 65 Pfam PF01632 Ribosomal protein L35 2 60 2.6E-22 T 28-03-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS26525 fe1a8a3a51c56dbf0860aac70e1d7bd7 65 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 17.841 T 28-03-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AM393_RS26525 fe1a8a3a51c56dbf0860aac70e1d7bd7 65 SUPERFAMILY SSF143034 2 64 3.01E-22 T 28-03-2018 AM393_RS26525 fe1a8a3a51c56dbf0860aac70e1d7bd7 65 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 64 1.2E-26 T 28-03-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AM393_RS26525 fe1a8a3a51c56dbf0860aac70e1d7bd7 65 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 28-03-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM393_RS26525 fe1a8a3a51c56dbf0860aac70e1d7bd7 65 PRINTS PR00064 Ribosomal protein L35 signature 36 54 1.1E-22 T 28-03-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AM393_RS26525 fe1a8a3a51c56dbf0860aac70e1d7bd7 65 PRINTS PR00064 Ribosomal protein L35 signature 3 20 1.1E-22 T 28-03-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AM393_RS26525 fe1a8a3a51c56dbf0860aac70e1d7bd7 65 PRINTS PR00064 Ribosomal protein L35 signature 21 35 1.1E-22 T 28-03-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AM393_RS05365 01702ec7c0561f53ef9e5beb7d81ef36 614 SUPERFAMILY SSF52540 285 382 2.21E-63 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS05365 01702ec7c0561f53ef9e5beb7d81ef36 614 SUPERFAMILY SSF52540 438 608 2.21E-63 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS05365 01702ec7c0561f53ef9e5beb7d81ef36 614 Hamap MF_01487 RecBCD enzyme subunit RecD [recD]. 16 606 53.925 T 28-03-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 AM393_RS05365 01702ec7c0561f53ef9e5beb7d81ef36 614 Pfam PF13604 AAA domain 158 336 9.4E-32 T 28-03-2018 AM393_RS05365 01702ec7c0561f53ef9e5beb7d81ef36 614 SUPERFAMILY SSF52540 7 364 8.12E-56 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS05365 01702ec7c0561f53ef9e5beb7d81ef36 614 TIGRFAM TIGR01447 recD: exodeoxyribonuclease V, alpha subunit 9 606 2.3E-186 T 28-03-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 AM393_RS05365 01702ec7c0561f53ef9e5beb7d81ef36 614 Gene3D G3DSA:3.40.50.300 115 359 1.4E-61 T 28-03-2018 AM393_RS05365 01702ec7c0561f53ef9e5beb7d81ef36 614 Pfam PF13538 UvrD-like helicase C-terminal domain 537 583 6.3E-14 T 28-03-2018 IPR027785 UvrD-like helicase C-terminal domain AM393_RS05365 01702ec7c0561f53ef9e5beb7d81ef36 614 Gene3D G3DSA:3.40.50.300 474 597 2.4E-24 T 28-03-2018 AM393_RS05365 01702ec7c0561f53ef9e5beb7d81ef36 614 Gene3D G3DSA:3.40.50.300 369 473 6.4E-14 T 28-03-2018 AM393_RS05365 01702ec7c0561f53ef9e5beb7d81ef36 614 SMART SM00382 167 337 0.0091 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS22475 837525cada6af40d5bcbb6a22c167428 391 Gene3D G3DSA:3.90.1150.10 304 390 2.2E-21 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM393_RS22475 837525cada6af40d5bcbb6a22c167428 391 Gene3D G3DSA:3.40.640.10 49 303 7.8E-42 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM393_RS22475 837525cada6af40d5bcbb6a22c167428 391 Pfam PF00155 Aminotransferase class I and II 35 385 1.3E-61 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AM393_RS22475 837525cada6af40d5bcbb6a22c167428 391 SUPERFAMILY SSF53383 7 388 9.6E-92 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM393_RS00480 ed125a6758543ecc9830b645efdbf569 263 Gene3D G3DSA:1.10.10.10 11 98 4.1E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS00480 ed125a6758543ecc9830b645efdbf569 263 Pfam PF01614 Bacterial transcriptional regulator 129 254 4.5E-47 T 28-03-2018 IPR014757 Transcription regulator IclR, C-terminal AM393_RS00480 ed125a6758543ecc9830b645efdbf569 263 Pfam PF09339 IclR helix-turn-helix domain 15 65 1.8E-13 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AM393_RS00480 ed125a6758543ecc9830b645efdbf569 263 SUPERFAMILY SSF55781 77 258 1.05E-55 T 28-03-2018 IPR029016 GAF domain-like AM393_RS00480 ed125a6758543ecc9830b645efdbf569 263 Gene3D G3DSA:3.30.450.40 99 263 2.2E-54 T 28-03-2018 IPR029016 GAF domain-like AM393_RS00480 ed125a6758543ecc9830b645efdbf569 263 SUPERFAMILY SSF46785 13 86 1.02E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS00480 ed125a6758543ecc9830b645efdbf569 263 SMART SM00346 13 102 1.2E-36 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AM393_RS22725 e020354c303bc84d0fdde90f98d8364d 201 Gene3D G3DSA:3.40.50.360 2 201 7.7E-41 T 28-03-2018 IPR029039 Flavoprotein-like domain AM393_RS22725 e020354c303bc84d0fdde90f98d8364d 201 Pfam PF02525 Flavodoxin-like fold 3 195 7.5E-47 T 28-03-2018 IPR003680 Flavodoxin-like fold AM393_RS22725 e020354c303bc84d0fdde90f98d8364d 201 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 199 33.161 T 28-03-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 AM393_RS22725 e020354c303bc84d0fdde90f98d8364d 201 SUPERFAMILY SSF52218 1 199 5.59E-59 T 28-03-2018 IPR029039 Flavoprotein-like domain AM393_RS11440 a99520f82e3e41213a5c20d9bbc176fc 316 SUPERFAMILY SSF143865 1 255 2.62E-38 T 28-03-2018 AM393_RS11440 a99520f82e3e41213a5c20d9bbc176fc 316 SUPERFAMILY SSF144083 251 314 1.28E-20 T 28-03-2018 AM393_RS11440 a99520f82e3e41213a5c20d9bbc176fc 316 Gene3D G3DSA:3.30.460.20 1 124 3.4E-10 T 28-03-2018 AM393_RS11440 a99520f82e3e41213a5c20d9bbc176fc 316 Gene3D G3DSA:1.20.58.340 249 316 1.0E-20 T 28-03-2018 AM393_RS11440 a99520f82e3e41213a5c20d9bbc176fc 316 Gene3D G3DSA:1.20.58.340 131 248 4.1E-9 T 28-03-2018 AM393_RS11440 a99520f82e3e41213a5c20d9bbc176fc 316 TIGRFAM TIGR00383 corA: magnesium and cobalt transport protein CorA 3 316 1.7E-110 T 28-03-2018 IPR004488 Magnesium/cobalt transport protein CorA GO:0006824|GO:0015087|GO:0015095|GO:0015693|GO:0016020 AM393_RS11440 a99520f82e3e41213a5c20d9bbc176fc 316 Pfam PF01544 CorA-like Mg2+ transporter protein 25 312 4.8E-57 T 28-03-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 AM393_RS06750 736c8f418cb23a332db9047ff8435242 131 Gene3D G3DSA:2.40.50.200 22 131 3.2E-39 T 28-03-2018 AM393_RS06750 736c8f418cb23a332db9047ff8435242 131 Pfam PF04076 Bacterial OB fold (BOF) protein 25 128 6.2E-41 T 28-03-2018 IPR005220 Bacterial OB-fold AM393_RS06750 736c8f418cb23a332db9047ff8435242 131 TIGRFAM TIGR00156 TIGR00156: TIGR00156 family protein 2 129 7.1E-53 T 28-03-2018 IPR016052 Bacteriophage 933W, L0136 AM393_RS06750 736c8f418cb23a332db9047ff8435242 131 SUPERFAMILY SSF101756 31 128 9.29E-35 T 28-03-2018 IPR005220 Bacterial OB-fold AM393_RS14495 4ea7a8e3d04bc314315dccd57f246327 433 TIGRFAM TIGR01109 Na_pump_decarbB: sodium ion-translocating decarboxylase, beta subunit 19 425 4.2E-195 T 28-03-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 AM393_RS14495 4ea7a8e3d04bc314315dccd57f246327 433 PIRSF PIRSF015658 1 431 2.8E-179 T 28-03-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 AM393_RS14495 4ea7a8e3d04bc314315dccd57f246327 433 Pfam PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit 20 429 1.2E-158 T 28-03-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 AM393_RS21670 74352f61896068408b79bc9a26cdebed 196 Pfam PF12557 Cob(I)alamin adenosyltransferase N terminal 3 21 2.1E-6 T 28-03-2018 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 AM393_RS21670 74352f61896068408b79bc9a26cdebed 196 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 24 196 1.4E-81 T 28-03-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 AM393_RS21670 74352f61896068408b79bc9a26cdebed 196 PIRSF PIRSF015617 1 196 6.7E-69 T 28-03-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 AM393_RS21670 74352f61896068408b79bc9a26cdebed 196 SUPERFAMILY SSF52540 7 196 5.97E-77 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS21670 74352f61896068408b79bc9a26cdebed 196 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 28 196 1.0E-59 T 28-03-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 AM393_RS21670 74352f61896068408b79bc9a26cdebed 196 Gene3D G3DSA:3.40.50.300 6 196 3.1E-71 T 28-03-2018 AM393_RS26805 ab977243ae260b605fd8293b05d92009 366 TIGRFAM TIGR00846 caca2: calcium/proton exchanger 2 365 1.2E-121 T 28-03-2018 IPR004713 Calcium/proton exchanger GO:0006812|GO:0008324|GO:0016021|GO:0055085 AM393_RS26805 ab977243ae260b605fd8293b05d92009 366 Pfam PF01699 Sodium/calcium exchanger protein 224 364 8.6E-8 T 28-03-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 AM393_RS26805 ab977243ae260b605fd8293b05d92009 366 Pfam PF01699 Sodium/calcium exchanger protein 40 190 1.1E-14 T 28-03-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 AM393_RS20445 5a5b3b8814bd763829cc6e0d761e7b09 196 Pfam PF00881 Nitroreductase family 17 174 4.2E-15 T 28-03-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 AM393_RS20445 5a5b3b8814bd763829cc6e0d761e7b09 196 Hamap MF_01204 Probable malonic semialdehyde reductase RutE [rutE]. 2 196 46.809 T 28-03-2018 IPR023936 NADH dehydrogenase/NAD(P)H nitroreductase, putative, RutE GO:0016491|GO:0055114 AM393_RS20445 5a5b3b8814bd763829cc6e0d761e7b09 196 Gene3D G3DSA:3.40.109.10 9 195 2.5E-31 T 28-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AM393_RS20445 5a5b3b8814bd763829cc6e0d761e7b09 196 SUPERFAMILY SSF55469 13 192 6.94E-42 T 28-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AM393_RS03525 9516f25ef3beed616be95e1308aaa4e4 392 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 8 390 2.1E-135 T 28-03-2018 IPR017687 Outer membrane protein assembly factor BamB AM393_RS03525 9516f25ef3beed616be95e1308aaa4e4 392 Gene3D G3DSA:2.130.10.10 322 392 0.0098 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 AM393_RS03525 9516f25ef3beed616be95e1308aaa4e4 392 SMART SM00564 289 320 230.0 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AM393_RS03525 9516f25ef3beed616be95e1308aaa4e4 392 SMART SM00564 114 146 2.0E-4 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AM393_RS03525 9516f25ef3beed616be95e1308aaa4e4 392 SMART SM00564 329 361 2.8E-4 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AM393_RS03525 9516f25ef3beed616be95e1308aaa4e4 392 SMART SM00564 64 96 3.1E-6 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AM393_RS03525 9516f25ef3beed616be95e1308aaa4e4 392 SMART SM00564 155 186 5.6E-5 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AM393_RS03525 9516f25ef3beed616be95e1308aaa4e4 392 SMART SM00564 200 231 85.0 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AM393_RS03525 9516f25ef3beed616be95e1308aaa4e4 392 SMART SM00564 251 282 6.9E-5 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AM393_RS03525 9516f25ef3beed616be95e1308aaa4e4 392 Pfam PF13360 PQQ-like domain 78 319 1.2E-54 T 28-03-2018 IPR002372 Pyrrolo-quinoline quinone repeat AM393_RS03525 9516f25ef3beed616be95e1308aaa4e4 392 Gene3D G3DSA:2.140.10.10 192 321 2.5E-17 T 28-03-2018 AM393_RS03525 9516f25ef3beed616be95e1308aaa4e4 392 Gene3D G3DSA:2.140.10.10 28 191 2.0E-31 T 28-03-2018 AM393_RS03525 9516f25ef3beed616be95e1308aaa4e4 392 SUPERFAMILY SSF50998 25 385 3.04E-80 T 28-03-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AM393_RS03525 9516f25ef3beed616be95e1308aaa4e4 392 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 2 392 40.702 T 28-03-2018 IPR017687 Outer membrane protein assembly factor BamB AM393_RS06095 e3e58bc1334892eb4cb51c4c229515e3 340 SUPERFAMILY SSF55961 130 328 7.42E-50 T 28-03-2018 AM393_RS06095 e3e58bc1334892eb4cb51c4c229515e3 340 Gene3D G3DSA:2.102.10.10 8 118 1.2E-21 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AM393_RS06095 e3e58bc1334892eb4cb51c4c229515e3 340 SUPERFAMILY SSF50022 8 123 2.49E-30 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AM393_RS06095 e3e58bc1334892eb4cb51c4c229515e3 340 Gene3D G3DSA:3.90.380.10 119 335 1.4E-39 T 28-03-2018 AM393_RS06095 e3e58bc1334892eb4cb51c4c229515e3 340 Pfam PF00355 Rieske [2Fe-2S] domain 17 97 3.6E-18 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AM393_RS23680 0e5bbbe46904266a6477ced16e92edbe 281 SUPERFAMILY SSF53850 87 278 1.21E-25 T 28-03-2018 AM393_RS23680 0e5bbbe46904266a6477ced16e92edbe 281 SUPERFAMILY SSF46785 1 109 5.03E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS23680 0e5bbbe46904266a6477ced16e92edbe 281 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 8.1E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS23680 0e5bbbe46904266a6477ced16e92edbe 281 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 8.1E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS23680 0e5bbbe46904266a6477ced16e92edbe 281 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 8.1E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS23680 0e5bbbe46904266a6477ced16e92edbe 281 Gene3D G3DSA:3.40.190.10 77 228 9.4E-19 T 28-03-2018 AM393_RS23680 0e5bbbe46904266a6477ced16e92edbe 281 Gene3D G3DSA:1.10.10.10 1 76 9.1E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS23680 0e5bbbe46904266a6477ced16e92edbe 281 Pfam PF03466 LysR substrate binding domain 86 276 3.4E-26 T 28-03-2018 IPR005119 LysR, substrate-binding AM393_RS23680 0e5bbbe46904266a6477ced16e92edbe 281 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 61 4.5E-18 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS22355 17ed167f9603ee7b97d4425221b3afab 176 Pfam PF11745 Protein of unknown function (DUF3304) 30 148 4.4E-33 T 28-03-2018 IPR021733 Protein of unknown function DUF3304 AM393_RS04635 dd07c40d7d1beee2408c7e78b675be1a 423 Pfam PF02378 Phosphotransferase system, EIIC 34 349 1.4E-45 T 28-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AM393_RS04635 dd07c40d7d1beee2408c7e78b675be1a 423 PIRSF PIRSF006351 6 423 4.6E-114 T 28-03-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 AM393_RS04635 dd07c40d7d1beee2408c7e78b675be1a 423 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 17 422 1.3E-91 T 28-03-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 AM393_RS20945 0183726acf7b5e711ef27af302704cc9 223 SMART SM00448 1 112 2.9E-38 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM393_RS20945 0183726acf7b5e711ef27af302704cc9 223 Gene3D G3DSA:3.40.50.2300 1 118 1.3E-33 T 28-03-2018 AM393_RS20945 0183726acf7b5e711ef27af302704cc9 223 SUPERFAMILY SSF52172 1 174 3.56E-39 T 28-03-2018 IPR011006 CheY-like superfamily AM393_RS20945 0183726acf7b5e711ef27af302704cc9 223 Pfam PF00072 Response regulator receiver domain 3 112 8.8E-25 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM393_RS20945 0183726acf7b5e711ef27af302704cc9 223 Gene3D G3DSA:1.10.10.10 119 223 2.4E-25 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS20945 0183726acf7b5e711ef27af302704cc9 223 SMART SM00862 145 220 1.3E-20 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM393_RS20945 0183726acf7b5e711ef27af302704cc9 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 220 3.1E-20 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM393_RS24150 5b106ae905177f6caec97c6756bccf40 295 SUPERFAMILY SSF53850 81 290 7.06E-36 T 28-03-2018 AM393_RS24150 5b106ae905177f6caec97c6756bccf40 295 Pfam PF03466 LysR substrate binding domain 81 271 4.0E-34 T 28-03-2018 IPR005119 LysR, substrate-binding AM393_RS24150 5b106ae905177f6caec97c6756bccf40 295 Gene3D G3DSA:3.40.190.10 81 169 3.9E-11 T 28-03-2018 AM393_RS24150 5b106ae905177f6caec97c6756bccf40 295 Gene3D G3DSA:3.40.190.10 170 257 1.1E-15 T 28-03-2018 AM393_RS24150 5b106ae905177f6caec97c6756bccf40 295 SUPERFAMILY SSF46785 1 104 3.2E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS24150 5b106ae905177f6caec97c6756bccf40 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 1 56 2.9E-19 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS24150 5b106ae905177f6caec97c6756bccf40 295 Gene3D G3DSA:1.10.10.10 1 80 4.8E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS24150 5b106ae905177f6caec97c6756bccf40 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 34 1.5E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS24150 5b106ae905177f6caec97c6756bccf40 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 13 24 1.5E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS24150 5b106ae905177f6caec97c6756bccf40 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 45 1.5E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS11570 a4b5886dd8bf70940e7631c5923f8509 387 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 87 105 - T 28-03-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 AM393_RS11570 a4b5886dd8bf70940e7631c5923f8509 387 SUPERFAMILY SSF53901 1 259 2.88E-79 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM393_RS11570 a4b5886dd8bf70940e7631c5923f8509 387 Pfam PF02803 Thiolase, C-terminal domain 261 386 1.1E-50 T 28-03-2018 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 AM393_RS11570 a4b5886dd8bf70940e7631c5923f8509 387 PIRSF PIRSF000429 1 387 6.0E-133 T 28-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 AM393_RS11570 a4b5886dd8bf70940e7631c5923f8509 387 Pfam PF00108 Thiolase, N-terminal domain 4 254 3.0E-86 T 28-03-2018 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 AM393_RS11570 a4b5886dd8bf70940e7631c5923f8509 387 TIGRFAM TIGR02445 fadA: acetyl-CoA C-acyltransferase FadA 3 387 1.1E-238 T 28-03-2018 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 AM393_RS11570 a4b5886dd8bf70940e7631c5923f8509 387 ProSitePatterns PS00737 Thiolases signature 2. 333 349 - T 28-03-2018 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 AM393_RS11570 a4b5886dd8bf70940e7631c5923f8509 387 Gene3D G3DSA:3.40.47.10 1 255 1.9E-56 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM393_RS11570 a4b5886dd8bf70940e7631c5923f8509 387 ProSitePatterns PS00099 Thiolases active site. 368 381 - T 28-03-2018 IPR020610 Thiolase, active site GO:0008152|GO:0016747 AM393_RS11570 a4b5886dd8bf70940e7631c5923f8509 387 Hamap MF_01620 3-ketoacyl-CoA thiolase [fadA]. 1 387 61.216 T 28-03-2018 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 AM393_RS11570 a4b5886dd8bf70940e7631c5923f8509 387 SUPERFAMILY SSF53901 262 386 1.11E-43 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM393_RS11570 a4b5886dd8bf70940e7631c5923f8509 387 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 385 1.3E-146 T 28-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 AM393_RS11570 a4b5886dd8bf70940e7631c5923f8509 387 Gene3D G3DSA:3.40.47.10 256 384 5.0E-34 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM393_RS09845 90dbda5418a3f58fd971a0a1568b2983 254 TIGRFAM TIGR00672 cdh: CDP-diacylglycerol diphosphatase 1 250 1.1E-128 T 28-03-2018 IPR015993 CDP-diacylglycerol pyrophosphatase, proteobacterial GO:0008654|GO:0008715|GO:0016020 KEGG: 00564+3.6.1.26 AM393_RS09845 90dbda5418a3f58fd971a0a1568b2983 254 PIRSF PIRSF001273 1 253 4.7E-98 T 28-03-2018 IPR003763 CDP-diacylglycerol pyrophosphatase GO:0008654|GO:0008715|GO:0016020 KEGG: 00564+3.6.1.26 AM393_RS09845 90dbda5418a3f58fd971a0a1568b2983 254 Pfam PF02611 CDP-diacylglycerol pyrophosphatase 31 249 1.8E-91 T 28-03-2018 IPR003763 CDP-diacylglycerol pyrophosphatase GO:0008654|GO:0008715|GO:0016020 KEGG: 00564+3.6.1.26 AM393_RS09845 90dbda5418a3f58fd971a0a1568b2983 254 SUPERFAMILY SSF54197 31 249 8.5E-88 T 28-03-2018 IPR011146 HIT-like domain GO:0003824 AM393_RS09845 90dbda5418a3f58fd971a0a1568b2983 254 Hamap MF_00319 CDP-diacylglycerol pyrophosphatase [cdh]. 1 251 49.082 T 28-03-2018 IPR003763 CDP-diacylglycerol pyrophosphatase GO:0008654|GO:0008715|GO:0016020 KEGG: 00564+3.6.1.26 AM393_RS09845 90dbda5418a3f58fd971a0a1568b2983 254 Gene3D G3DSA:3.30.428.30 29 249 1.6E-89 T 28-03-2018 AM393_RS04025 f548bc4672436f248ca52f5ac4e60af0 553 SUPERFAMILY SSF52540 1 217 1.02E-67 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS04025 f548bc4672436f248ca52f5ac4e60af0 553 Pfam PF02463 RecF/RecN/SMC N terminal domain 1 499 4.7E-18 T 28-03-2018 IPR003395 RecF/RecN/SMC, N-terminal AM393_RS04025 f548bc4672436f248ca52f5ac4e60af0 553 Gene3D G3DSA:3.40.50.300 1 533 4.4E-43 T 28-03-2018 AM393_RS04025 f548bc4672436f248ca52f5ac4e60af0 553 PIRSF PIRSF003128 1 553 2.7E-158 T 28-03-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 AM393_RS04025 f548bc4672436f248ca52f5ac4e60af0 553 SUPERFAMILY SSF52540 284 505 2.94E-31 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS04025 f548bc4672436f248ca52f5ac4e60af0 553 SUPERFAMILY SSF52540 4 50 2.94E-31 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS04025 f548bc4672436f248ca52f5ac4e60af0 553 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 552 9.0E-167 T 28-03-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 AM393_RS00655 227a2f14c33af06f6037449ac1c28071 480 PRINTS PR01050 Pyruvate kinase family signature 300 318 1.4E-50 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM393_RS00655 227a2f14c33af06f6037449ac1c28071 480 PRINTS PR01050 Pyruvate kinase family signature 319 335 1.4E-50 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM393_RS00655 227a2f14c33af06f6037449ac1c28071 480 PRINTS PR01050 Pyruvate kinase family signature 223 249 1.4E-50 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM393_RS00655 227a2f14c33af06f6037449ac1c28071 480 PRINTS PR01050 Pyruvate kinase family signature 275 299 1.4E-50 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM393_RS00655 227a2f14c33af06f6037449ac1c28071 480 PRINTS PR01050 Pyruvate kinase family signature 63 79 1.4E-50 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM393_RS00655 227a2f14c33af06f6037449ac1c28071 480 PRINTS PR01050 Pyruvate kinase family signature 250 274 1.4E-50 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM393_RS00655 227a2f14c33af06f6037449ac1c28071 480 PRINTS PR01050 Pyruvate kinase family signature 190 204 1.4E-50 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM393_RS00655 227a2f14c33af06f6037449ac1c28071 480 Gene3D G3DSA:3.40.1380.20 328 480 1.2E-41 T 28-03-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM393_RS00655 227a2f14c33af06f6037449ac1c28071 480 Gene3D G3DSA:3.20.20.60 6 173 1.1E-34 T 28-03-2018 AM393_RS00655 227a2f14c33af06f6037449ac1c28071 480 Gene3D G3DSA:3.20.20.60 174 327 4.7E-53 T 28-03-2018 AM393_RS00655 227a2f14c33af06f6037449ac1c28071 480 Pfam PF00224 Pyruvate kinase, barrel domain 6 344 4.6E-130 T 28-03-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM393_RS00655 227a2f14c33af06f6037449ac1c28071 480 ProSitePatterns PS00110 Pyruvate kinase active site signature. 218 230 - T 28-03-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM393_RS00655 227a2f14c33af06f6037449ac1c28071 480 SUPERFAMILY SSF52935 329 479 2.22E-39 T 28-03-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM393_RS00655 227a2f14c33af06f6037449ac1c28071 480 Pfam PF02887 Pyruvate kinase, alpha/beta domain 363 477 7.5E-29 T 28-03-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM393_RS00655 227a2f14c33af06f6037449ac1c28071 480 SUPERFAMILY SSF50800 74 168 1.15E-24 T 28-03-2018 IPR011037 Pyruvate kinase-like, insert domain AM393_RS00655 227a2f14c33af06f6037449ac1c28071 480 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 6 479 2.4E-174 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM393_RS00655 227a2f14c33af06f6037449ac1c28071 480 SUPERFAMILY SSF51621 171 344 1.05E-85 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AM393_RS00655 227a2f14c33af06f6037449ac1c28071 480 SUPERFAMILY SSF51621 4 79 1.05E-85 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AM393_RS18865 66b749c589b5f0f3dcc31d6aca961890 257 SUPERFAMILY SSF53850 28 255 2.74E-70 T 28-03-2018 AM393_RS18865 66b749c589b5f0f3dcc31d6aca961890 257 Gene3D G3DSA:3.40.190.10 122 218 9.3E-32 T 28-03-2018 AM393_RS18865 66b749c589b5f0f3dcc31d6aca961890 257 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 34 253 7.9E-84 T 28-03-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689|GO:0030288 AM393_RS18865 66b749c589b5f0f3dcc31d6aca961890 257 Pfam PF13531 Bacterial extracellular solute-binding protein 29 254 6.6E-50 T 28-03-2018 AM393_RS18865 66b749c589b5f0f3dcc31d6aca961890 257 PIRSF PIRSF004846 2 257 1.3E-79 T 28-03-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689|GO:0030288 AM393_RS18865 66b749c589b5f0f3dcc31d6aca961890 257 Gene3D G3DSA:3.40.190.10 26 121 5.1E-19 T 28-03-2018 AM393_RS14015 e0e4ad33b0506435fc501f4e46d349f2 304 SUPERFAMILY SSF48008 158 294 1.78E-13 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AM393_RS14015 e0e4ad33b0506435fc501f4e46d349f2 304 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 42 58 5.2E-6 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM393_RS14015 e0e4ad33b0506435fc501f4e46d349f2 304 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 28 42 5.2E-6 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM393_RS14015 e0e4ad33b0506435fc501f4e46d349f2 304 SMART SM00895 159 287 2.6E-11 T 28-03-2018 IPR011711 GntR, C-terminal AM393_RS14015 e0e4ad33b0506435fc501f4e46d349f2 304 Gene3D G3DSA:1.20.120.530 156 304 3.9E-16 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AM393_RS14015 e0e4ad33b0506435fc501f4e46d349f2 304 Gene3D G3DSA:1.10.10.10 1 71 5.5E-9 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS14015 e0e4ad33b0506435fc501f4e46d349f2 304 SUPERFAMILY SSF46785 93 147 8.18E-6 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS14015 e0e4ad33b0506435fc501f4e46d349f2 304 Gene3D G3DSA:1.10.10.10 81 155 5.8E-8 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS14015 e0e4ad33b0506435fc501f4e46d349f2 304 Pfam PF00392 Bacterial regulatory proteins, gntR family 26 59 8.6E-5 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM393_RS14015 e0e4ad33b0506435fc501f4e46d349f2 304 SUPERFAMILY SSF46785 3 62 7.94E-8 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS14015 e0e4ad33b0506435fc501f4e46d349f2 304 Pfam PF07729 FCD domain 159 286 3.0E-10 T 28-03-2018 IPR011711 GntR, C-terminal AM393_RS16475 a3dbac2d1a5d097c9e4411ff6ac30753 207 Pfam PF00574 Clp protease 26 205 6.8E-90 T 28-03-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA AM393_RS16475 a3dbac2d1a5d097c9e4411ff6ac30753 207 Gene3D G3DSA:3.90.226.10 15 207 4.5E-48 T 28-03-2018 AM393_RS16475 a3dbac2d1a5d097c9e4411ff6ac30753 207 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 125 138 - T 28-03-2018 IPR033135 ClpP, histidine active site AM393_RS16475 a3dbac2d1a5d097c9e4411ff6ac30753 207 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 14 205 4.0E-112 T 28-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AM393_RS16475 a3dbac2d1a5d097c9e4411ff6ac30753 207 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 103 114 - T 28-03-2018 IPR018215 ClpP, Ser active site AM393_RS16475 a3dbac2d1a5d097c9e4411ff6ac30753 207 PRINTS PR00127 Clp protease catalytic subunit P signature 124 143 1.7E-54 T 28-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AM393_RS16475 a3dbac2d1a5d097c9e4411ff6ac30753 207 PRINTS PR00127 Clp protease catalytic subunit P signature 181 200 1.7E-54 T 28-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AM393_RS16475 a3dbac2d1a5d097c9e4411ff6ac30753 207 PRINTS PR00127 Clp protease catalytic subunit P signature 32 47 1.7E-54 T 28-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AM393_RS16475 a3dbac2d1a5d097c9e4411ff6ac30753 207 PRINTS PR00127 Clp protease catalytic subunit P signature 103 120 1.7E-54 T 28-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AM393_RS16475 a3dbac2d1a5d097c9e4411ff6ac30753 207 PRINTS PR00127 Clp protease catalytic subunit P signature 72 92 1.7E-54 T 28-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AM393_RS16475 a3dbac2d1a5d097c9e4411ff6ac30753 207 SUPERFAMILY SSF52096 23 206 6.63E-76 T 28-03-2018 IPR029045 ClpP/crotonase-like domain AM393_RS16475 a3dbac2d1a5d097c9e4411ff6ac30753 207 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 16 206 45.028 T 28-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AM393_RS05795 58f38642aa6e8625d7eccbeaf344a582 185 Pfam PF02525 Flavodoxin-like fold 3 166 5.3E-37 T 28-03-2018 IPR003680 Flavodoxin-like fold AM393_RS05795 58f38642aa6e8625d7eccbeaf344a582 185 Gene3D G3DSA:3.40.50.360 1 184 2.0E-29 T 28-03-2018 IPR029039 Flavoprotein-like domain AM393_RS05795 58f38642aa6e8625d7eccbeaf344a582 185 SUPERFAMILY SSF52218 1 176 4.4E-43 T 28-03-2018 IPR029039 Flavoprotein-like domain AM393_RS03605 5d8139d984ea8db849ea41dae71a7c86 171 Gene3D G3DSA:1.10.287.110 1 79 6.1E-12 T 28-03-2018 IPR001623 DnaJ domain AM393_RS03605 5d8139d984ea8db849ea41dae71a7c86 171 Gene3D G3DSA:1.20.1280.20 81 170 1.6E-23 T 28-03-2018 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AM393_RS03605 5d8139d984ea8db849ea41dae71a7c86 171 Pfam PF00226 DnaJ domain 2 70 6.3E-7 T 28-03-2018 IPR001623 DnaJ domain AM393_RS03605 5d8139d984ea8db849ea41dae71a7c86 171 Hamap MF_00682 Co-chaperone protein HscB [hscB]. 1 169 24.047 T 28-03-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AM393_RS03605 5d8139d984ea8db849ea41dae71a7c86 171 Pfam PF07743 HSCB C-terminal oligomerisation domain 88 160 5.9E-17 T 28-03-2018 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AM393_RS03605 5d8139d984ea8db849ea41dae71a7c86 171 SUPERFAMILY SSF46565 1 75 1.16E-18 T 28-03-2018 IPR001623 DnaJ domain AM393_RS03605 5d8139d984ea8db849ea41dae71a7c86 171 SUPERFAMILY SSF47144 77 170 1.06E-23 T 28-03-2018 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AM393_RS03605 5d8139d984ea8db849ea41dae71a7c86 171 TIGRFAM TIGR00714 hscB: Fe-S protein assembly co-chaperone HscB 13 168 7.6E-60 T 28-03-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AM393_RS03605 5d8139d984ea8db849ea41dae71a7c86 171 SMART SM00271 1 66 1.1E-9 T 28-03-2018 IPR001623 DnaJ domain AM393_RS03815 a016f88ffe4f2869536475d218ea9b1d 539 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 370 377 9.7E-6 T 28-03-2018 AM393_RS03815 a016f88ffe4f2869536475d218ea9b1d 539 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 10 32 9.7E-6 T 28-03-2018 AM393_RS03815 a016f88ffe4f2869536475d218ea9b1d 539 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 355 377 1.2E-10 T 28-03-2018 AM393_RS03815 a016f88ffe4f2869536475d218ea9b1d 539 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 11 30 1.2E-10 T 28-03-2018 AM393_RS03815 a016f88ffe4f2869536475d218ea9b1d 539 Pfam PF02910 Fumarate reductase flavoprotein C-term 441 521 2.2E-13 T 28-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM393_RS03815 a016f88ffe4f2869536475d218ea9b1d 539 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 8 520 2.1E-230 T 28-03-2018 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342 AM393_RS03815 a016f88ffe4f2869536475d218ea9b1d 539 Gene3D G3DSA:1.20.58.100 438 533 3.8E-27 T 28-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM393_RS03815 a016f88ffe4f2869536475d218ea9b1d 539 SUPERFAMILY SSF51905 356 445 6.79E-75 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS03815 a016f88ffe4f2869536475d218ea9b1d 539 SUPERFAMILY SSF51905 4 255 6.79E-75 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS03815 a016f88ffe4f2869536475d218ea9b1d 539 PIRSF PIRSF000171 339 527 4.1E-14 T 28-03-2018 AM393_RS03815 a016f88ffe4f2869536475d218ea9b1d 539 PIRSF PIRSF000171 1 257 1.5E-21 T 28-03-2018 AM393_RS03815 a016f88ffe4f2869536475d218ea9b1d 539 SUPERFAMILY SSF56425 238 353 2.09E-40 T 28-03-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM393_RS03815 a016f88ffe4f2869536475d218ea9b1d 539 Pfam PF00890 FAD binding domain 10 392 2.2E-102 T 28-03-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM393_RS03815 a016f88ffe4f2869536475d218ea9b1d 539 Gene3D G3DSA:3.50.50.60 1 437 4.1E-71 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS03815 a016f88ffe4f2869536475d218ea9b1d 539 SUPERFAMILY SSF46977 426 525 6.8E-31 T 28-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM393_RS02465 b29415f0ac61bb1bad28e48451ca2193 354 Gene3D G3DSA:1.10.10.60 80 137 3.0E-18 T 28-03-2018 AM393_RS02465 b29415f0ac61bb1bad28e48451ca2193 354 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 270 348 1.4E-30 T 28-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 AM393_RS02465 b29415f0ac61bb1bad28e48451ca2193 354 SUPERFAMILY SSF57884 3 92 2.09E-32 T 28-03-2018 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 AM393_RS02465 b29415f0ac61bb1bad28e48451ca2193 354 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 319 325 - T 28-03-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 AM393_RS02465 b29415f0ac61bb1bad28e48451ca2193 354 Gene3D G3DSA:3.40.10.10 1 77 4.5E-27 T 28-03-2018 IPR035451 Ada-like domain AM393_RS02465 b29415f0ac61bb1bad28e48451ca2193 354 PIRSF PIRSF000409 1 354 2.7E-134 T 28-03-2018 IPR016221 Bifunctional regulatory protein Ada AM393_RS02465 b29415f0ac61bb1bad28e48451ca2193 354 Gene3D G3DSA:3.30.160.70 180 266 2.2E-20 T 28-03-2018 AM393_RS02465 b29415f0ac61bb1bad28e48451ca2193 354 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 136 177 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM393_RS02465 b29415f0ac61bb1bad28e48451ca2193 354 SUPERFAMILY SSF46689 85 133 1.12E-9 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS02465 b29415f0ac61bb1bad28e48451ca2193 354 Gene3D G3DSA:1.10.10.10 267 354 4.8E-32 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS02465 b29415f0ac61bb1bad28e48451ca2193 354 SUPERFAMILY SSF53155 189 266 4.71E-22 T 28-03-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 AM393_RS02465 b29415f0ac61bb1bad28e48451ca2193 354 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 190 248 2.0E-5 T 28-03-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 AM393_RS02465 b29415f0ac61bb1bad28e48451ca2193 354 SUPERFAMILY SSF46767 268 348 9.81E-30 T 28-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 AM393_RS02465 b29415f0ac61bb1bad28e48451ca2193 354 Gene3D G3DSA:1.10.10.60 138 179 3.4E-4 T 28-03-2018 AM393_RS02465 b29415f0ac61bb1bad28e48451ca2193 354 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 269 348 1.2E-34 T 28-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 AM393_RS02465 b29415f0ac61bb1bad28e48451ca2193 354 Pfam PF02805 Metal binding domain of Ada 12 75 1.5E-30 T 28-03-2018 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 AM393_RS02465 b29415f0ac61bb1bad28e48451ca2193 354 SMART SM00342 99 181 6.4E-24 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM393_RS02465 b29415f0ac61bb1bad28e48451ca2193 354 Pfam PF12833 Helix-turn-helix domain 105 182 2.1E-18 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM393_RS10730 44e969f19c4794795d792afe1556ca1c 199 Gene3D G3DSA:3.40.50.1000 73 197 8.5E-21 T 28-03-2018 IPR023214 HAD-like domain AM393_RS10730 44e969f19c4794795d792afe1556ca1c 199 Pfam PF13419 Haloacid dehalogenase-like hydrolase 62 184 3.8E-10 T 28-03-2018 IPR023214 HAD-like domain AM393_RS10730 44e969f19c4794795d792afe1556ca1c 199 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 64 184 1.5E-17 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM393_RS10730 44e969f19c4794795d792afe1556ca1c 199 Gene3D G3DSA:1.10.150.240 18 72 1.2E-19 T 28-03-2018 IPR023198 Phosphoglycolate phosphatase, domain 2 AM393_RS10730 44e969f19c4794795d792afe1556ca1c 199 SUPERFAMILY SSF56784 3 193 5.41E-42 T 28-03-2018 IPR023214 HAD-like domain AM393_RS10730 44e969f19c4794795d792afe1556ca1c 199 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 173 186 1.4E-5 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM393_RS10730 44e969f19c4794795d792afe1556ca1c 199 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 96 109 1.4E-5 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM393_RS10730 44e969f19c4794795d792afe1556ca1c 199 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 128 144 1.4E-5 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM393_RS10730 44e969f19c4794795d792afe1556ca1c 199 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 146 166 1.4E-5 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM393_RS22465 d7e1b7e2407819ffbd60079c07e1d5c1 182 SUPERFAMILY SSF48498 77 177 1.45E-8 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AM393_RS22465 d7e1b7e2407819ffbd60079c07e1d5c1 182 Gene3D G3DSA:1.10.357.10 1 181 5.1E-34 T 28-03-2018 AM393_RS22465 d7e1b7e2407819ffbd60079c07e1d5c1 182 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 3.3E-10 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM393_RS22465 d7e1b7e2407819ffbd60079c07e1d5c1 182 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 3.3E-10 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM393_RS22465 d7e1b7e2407819ffbd60079c07e1d5c1 182 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 57 3.3E-15 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM393_RS22465 d7e1b7e2407819ffbd60079c07e1d5c1 182 SUPERFAMILY SSF46689 2 80 1.75E-18 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS00245 9287887ba590cbf193d0f354bbb7d59a 463 Pfam PF16966 Porin-like glycoporin RafY 98 463 3.8E-189 T 28-03-2018 IPR016963 Glycoporin RafY AM393_RS00245 9287887ba590cbf193d0f354bbb7d59a 463 Pfam PF11471 Maltoporin periplasmic N-terminal extension 1 55 2.4E-10 T 28-03-2018 IPR021570 LamB-type porin N-terminal domain AM393_RS00245 9287887ba590cbf193d0f354bbb7d59a 463 Gene3D G3DSA:1.20.5.1070 23 96 0.0015 T 28-03-2018 AM393_RS05330 7c4cb1303464e6e85c2adf8e9836c542 146 PIRSF PIRSF036409 1 146 1.4E-53 T 28-03-2018 IPR012381 Ethanolamine/propanediol utilisation protein, EutP/PduV GO:0005524|GO:0006576 AM393_RS05330 7c4cb1303464e6e85c2adf8e9836c542 146 TIGRFAM TIGR02528 EutP: ethanolamine utilization protein, EutP 2 141 9.6E-55 T 28-03-2018 IPR012381 Ethanolamine/propanediol utilisation protein, EutP/PduV GO:0005524|GO:0006576 AM393_RS05330 7c4cb1303464e6e85c2adf8e9836c542 146 SUPERFAMILY SSF52540 3 140 6.58E-19 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS05330 7c4cb1303464e6e85c2adf8e9836c542 146 Gene3D G3DSA:3.40.50.300 1 143 3.9E-16 T 28-03-2018 AM393_RS05330 7c4cb1303464e6e85c2adf8e9836c542 146 Pfam PF10662 Ethanolamine utilisation - propanediol utilisation 1 141 1.2E-57 T 28-03-2018 IPR012381 Ethanolamine/propanediol utilisation protein, EutP/PduV GO:0005524|GO:0006576 AM393_RS22760 a2625ed404315f3d3cc0104693539865 315 Pfam PF03466 LysR substrate binding domain 93 297 1.8E-29 T 28-03-2018 IPR005119 LysR, substrate-binding AM393_RS22760 a2625ed404315f3d3cc0104693539865 315 Gene3D G3DSA:3.40.190.10 180 268 3.7E-21 T 28-03-2018 AM393_RS22760 a2625ed404315f3d3cc0104693539865 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 2.0E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS22760 a2625ed404315f3d3cc0104693539865 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 2.0E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS22760 a2625ed404315f3d3cc0104693539865 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 2.0E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS22760 a2625ed404315f3d3cc0104693539865 315 Gene3D G3DSA:3.40.190.10 89 179 2.0E-7 T 28-03-2018 AM393_RS22760 a2625ed404315f3d3cc0104693539865 315 SUPERFAMILY SSF53850 93 300 1.49E-33 T 28-03-2018 AM393_RS22760 a2625ed404315f3d3cc0104693539865 315 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 7.6E-19 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS22760 a2625ed404315f3d3cc0104693539865 315 Gene3D G3DSA:1.10.10.10 2 87 2.8E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS22760 a2625ed404315f3d3cc0104693539865 315 SUPERFAMILY SSF46785 4 103 2.55E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS04820 64ec10c214887cbc51c9d044a9dc76ef 159 Gene3D G3DSA:3.30.1330.50 1 158 1.6E-73 T 28-03-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AM393_RS04820 64ec10c214887cbc51c9d044a9dc76ef 159 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 2 155 1.1E-71 T 28-03-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AM393_RS04820 64ec10c214887cbc51c9d044a9dc76ef 159 SUPERFAMILY SSF69765 1 156 1.44E-66 T 28-03-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AM393_RS04820 64ec10c214887cbc51c9d044a9dc76ef 159 Pfam PF02542 YgbB family 1 154 1.5E-66 T 28-03-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AM393_RS04820 64ec10c214887cbc51c9d044a9dc76ef 159 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 35 50 - T 28-03-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AM393_RS04820 64ec10c214887cbc51c9d044a9dc76ef 159 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 1 156 36.905 T 28-03-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AM393_RS24355 ac783f20d38e7f8d609ad71534810ad8 520 Pfam PF07690 Major Facilitator Superfamily 28 421 3.9E-38 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS24355 ac783f20d38e7f8d609ad71534810ad8 520 Gene3D G3DSA:1.20.1250.20 271 520 1.0E-25 T 28-03-2018 AM393_RS24355 ac783f20d38e7f8d609ad71534810ad8 520 Gene3D G3DSA:1.20.1250.20 18 208 3.8E-22 T 28-03-2018 AM393_RS24355 ac783f20d38e7f8d609ad71534810ad8 520 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 21 511 3.9E-122 T 28-03-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 AM393_RS24355 ac783f20d38e7f8d609ad71534810ad8 520 SUPERFAMILY SSF103473 490 518 1.83E-56 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS24355 ac783f20d38e7f8d609ad71534810ad8 520 SUPERFAMILY SSF103473 260 431 1.83E-56 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS24355 ac783f20d38e7f8d609ad71534810ad8 520 SUPERFAMILY SSF103473 16 202 1.83E-56 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS24355 ac783f20d38e7f8d609ad71534810ad8 520 PRINTS PR01036 Tetracycline resistance protein TetB signature 147 171 1.1E-8 T 28-03-2018 AM393_RS24355 ac783f20d38e7f8d609ad71534810ad8 520 PRINTS PR01036 Tetracycline resistance protein TetB signature 172 196 1.1E-8 T 28-03-2018 AM393_RS24355 ac783f20d38e7f8d609ad71534810ad8 520 PRINTS PR01036 Tetracycline resistance protein TetB signature 412 431 1.1E-8 T 28-03-2018 AM393_RS24355 ac783f20d38e7f8d609ad71534810ad8 520 PRINTS PR01036 Tetracycline resistance protein TetB signature 117 137 1.1E-8 T 28-03-2018 AM393_RS24355 ac783f20d38e7f8d609ad71534810ad8 520 PRINTS PR01036 Tetracycline resistance protein TetB signature 26 50 1.1E-8 T 28-03-2018 AM393_RS04335 03da619d467a55f568f95f90e3856c3a 255 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 220 235 4.7E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM393_RS04335 03da619d467a55f568f95f90e3856c3a 255 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 235 251 4.7E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM393_RS04335 03da619d467a55f568f95f90e3856c3a 255 SMART SM00342 169 251 1.4E-21 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM393_RS04335 03da619d467a55f568f95f90e3856c3a 255 Gene3D G3DSA:1.10.10.60 203 253 2.2E-9 T 28-03-2018 AM393_RS04335 03da619d467a55f568f95f90e3856c3a 255 Gene3D G3DSA:1.10.10.60 149 202 3.2E-10 T 28-03-2018 AM393_RS04335 03da619d467a55f568f95f90e3856c3a 255 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 206 247 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM393_RS04335 03da619d467a55f568f95f90e3856c3a 255 SUPERFAMILY SSF46689 206 252 1.7E-8 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS04335 03da619d467a55f568f95f90e3856c3a 255 SUPERFAMILY SSF51182 14 174 1.07E-16 T 28-03-2018 IPR011051 RmlC-like cupin domain AM393_RS04335 03da619d467a55f568f95f90e3856c3a 255 Pfam PF02311 AraC-like ligand binding domain 28 133 9.7E-8 T 28-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AM393_RS04335 03da619d467a55f568f95f90e3856c3a 255 Pfam PF12833 Helix-turn-helix domain 176 252 2.1E-21 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM393_RS04335 03da619d467a55f568f95f90e3856c3a 255 Gene3D G3DSA:2.60.120.10 1 90 2.5E-10 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AM393_RS21440 32f81f825682c6f7b08c7cd3156a6ccc 492 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 270 281 - T 28-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 AM393_RS21440 32f81f825682c6f7b08c7cd3156a6ccc 492 Gene3D G3DSA:3.40.309.10 259 453 7.7E-41 T 28-03-2018 AM393_RS21440 32f81f825682c6f7b08c7cd3156a6ccc 492 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 242 249 - T 28-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 AM393_RS21440 32f81f825682c6f7b08c7cd3156a6ccc 492 Pfam PF00171 Aldehyde dehydrogenase family 12 459 4.6E-115 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AM393_RS21440 32f81f825682c6f7b08c7cd3156a6ccc 492 Hamap MF_01174 N-succinylglutamate 5-semialdehyde dehydrogenase [astD]. 1 486 56.839 T 28-03-2018 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 AM393_RS21440 32f81f825682c6f7b08c7cd3156a6ccc 492 SUPERFAMILY SSF53720 2 455 1.14E-119 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AM393_RS21440 32f81f825682c6f7b08c7cd3156a6ccc 492 Gene3D G3DSA:3.40.605.10 1 258 2.7E-76 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AM393_RS21440 32f81f825682c6f7b08c7cd3156a6ccc 492 TIGRFAM TIGR03240 arg_catab_astD: succinylglutamate-semialdehyde dehydrogenase 3 486 2.2E-245 T 28-03-2018 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 AM393_RS24375 c95c1676fc59c6218c3174b337ad4d11 299 Gene3D G3DSA:3.40.630.30 141 290 7.5E-6 T 28-03-2018 AM393_RS24375 c95c1676fc59c6218c3174b337ad4d11 299 SUPERFAMILY SSF55729 139 282 3.54E-6 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM393_RS24565 f3b65f8bed833045c64e8c455287d5c3 621 Gene3D G3DSA:3.90.1310.10 19 235 1.8E-53 T 28-03-2018 AM393_RS24565 f3b65f8bed833045c64e8c455287d5c3 621 SUPERFAMILY SSF56601 240 600 1.18E-89 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AM393_RS24565 f3b65f8bed833045c64e8c455287d5c3 621 Pfam PF03717 Penicillin-binding Protein dimerisation domain 50 223 4.3E-46 T 28-03-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 AM393_RS24565 f3b65f8bed833045c64e8c455287d5c3 621 Pfam PF00905 Penicillin binding protein transpeptidase domain 258 597 6.0E-79 T 28-03-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AM393_RS24565 f3b65f8bed833045c64e8c455287d5c3 621 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 5 600 9.1E-228 T 28-03-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0016020 AM393_RS24565 f3b65f8bed833045c64e8c455287d5c3 621 SUPERFAMILY SSF56519 43 239 3.27E-51 T 28-03-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 AM393_RS24565 f3b65f8bed833045c64e8c455287d5c3 621 Gene3D G3DSA:3.40.710.10 236 606 8.5E-85 T 28-03-2018 AM393_RS23515 bac9d75596eced66f5eecaa7d82d19e6 225 Gene3D G3DSA:3.40.50.720 1 225 1.9E-55 T 28-03-2018 AM393_RS23515 bac9d75596eced66f5eecaa7d82d19e6 225 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 172 4.7E-30 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS23515 bac9d75596eced66f5eecaa7d82d19e6 225 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 153 4.7E-30 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS23515 bac9d75596eced66f5eecaa7d82d19e6 225 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 186 206 4.7E-30 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS23515 bac9d75596eced66f5eecaa7d82d19e6 225 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 4.7E-30 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS23515 bac9d75596eced66f5eecaa7d82d19e6 225 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 109 125 4.7E-30 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS23515 bac9d75596eced66f5eecaa7d82d19e6 225 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 2 165 0.0066 T 28-03-2018 AM393_RS23515 bac9d75596eced66f5eecaa7d82d19e6 225 SUPERFAMILY SSF51735 1 224 4.29E-53 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS23515 bac9d75596eced66f5eecaa7d82d19e6 225 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 8 222 1.3E-32 T 28-03-2018 AM393_RS18135 bcb0c10be9013b87a51330ee8474cede 411 Pfam PF13556 PucR C-terminal helix-turn-helix domain 341 398 2.0E-18 T 28-03-2018 IPR025736 PucR C-terminal helix-turn-helix domain AM393_RS18135 bcb0c10be9013b87a51330ee8474cede 411 Pfam PF07905 Purine catabolism regulatory protein-like family 7 127 7.9E-28 T 28-03-2018 IPR012914 Purine catabolism PurC-like domain AM393_RS18135 bcb0c10be9013b87a51330ee8474cede 411 SUPERFAMILY SSF46689 346 375 3.76E-6 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS18135 bcb0c10be9013b87a51330ee8474cede 411 Gene3D G3DSA:1.10.10.60 335 378 1.8E-9 T 28-03-2018 AM393_RS08850 188b3d7c0fe0d18e27f83efa26b1cdb2 237 SMART SM00382 30 216 5.5E-4 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS08850 188b3d7c0fe0d18e27f83efa26b1cdb2 237 SUPERFAMILY SSF52540 5 234 1.2E-61 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS08850 188b3d7c0fe0d18e27f83efa26b1cdb2 237 Gene3D G3DSA:3.40.50.300 1 237 1.7E-60 T 28-03-2018 AM393_RS08850 188b3d7c0fe0d18e27f83efa26b1cdb2 237 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS08850 188b3d7c0fe0d18e27f83efa26b1cdb2 237 PIRSF PIRSF039137 1 237 1.3E-104 T 28-03-2018 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein GO:0015658|GO:0015803 AM393_RS08850 188b3d7c0fe0d18e27f83efa26b1cdb2 237 Pfam PF00005 ABC transporter 21 165 2.1E-33 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS14600 285ed9116787f79ecdc4a31b4be37688 273 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 11 263 9.1E-89 T 28-03-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 AM393_RS14600 285ed9116787f79ecdc4a31b4be37688 273 SMART SM00650 25 198 7.2E-83 T 28-03-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 AM393_RS14600 285ed9116787f79ecdc4a31b4be37688 273 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 9 265 54.446 T 28-03-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 AM393_RS14600 285ed9116787f79ecdc4a31b4be37688 273 Gene3D G3DSA:1.10.8.100 209 264 2.0E-17 T 28-03-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 AM393_RS14600 285ed9116787f79ecdc4a31b4be37688 273 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 41 68 - T 28-03-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 AM393_RS14600 285ed9116787f79ecdc4a31b4be37688 273 SUPERFAMILY SSF53335 17 266 2.11E-75 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM393_RS14600 285ed9116787f79ecdc4a31b4be37688 273 Pfam PF00398 Ribosomal RNA adenine dimethylase 9 265 2.1E-86 T 28-03-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm AM393_RS14600 285ed9116787f79ecdc4a31b4be37688 273 Gene3D G3DSA:3.40.50.150 2 208 2.1E-51 T 28-03-2018 AM393_RS02870 2363b08e181a38dbddff6686fd74e3d3 391 Pfam PF07690 Major Facilitator Superfamily 224 386 1.7E-15 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS02870 2363b08e181a38dbddff6686fd74e3d3 391 SUPERFAMILY SSF103473 15 390 1.15E-48 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS02870 2363b08e181a38dbddff6686fd74e3d3 391 Gene3D G3DSA:1.20.1250.20 215 391 6.4E-21 T 28-03-2018 AM393_RS02870 2363b08e181a38dbddff6686fd74e3d3 391 Gene3D G3DSA:1.20.1250.20 12 200 1.7E-17 T 28-03-2018 AM393_RS26795 f2f7fdf95efa746199f2dc6e94a53b66 226 Pfam PF04752 ChaC-like protein 47 214 3.5E-53 T 28-03-2018 IPR006840 Glutathione-specific gamma-glutamylcyclotransferase GO:0003839|GO:0006751 Reactome: R-HSA-174403 AM393_RS26795 f2f7fdf95efa746199f2dc6e94a53b66 226 SUPERFAMILY SSF110857 47 160 2.88E-10 T 28-03-2018 IPR013024 Gamma-glutamyl cyclotransferase-like AM393_RS26795 f2f7fdf95efa746199f2dc6e94a53b66 226 Gene3D G3DSA:3.10.490.10 32 220 2.1E-36 T 28-03-2018 AM393_RS14895 6bace428608bb01467cf054b39486836 130 PRINTS PR00502 NUDIX hydrolase family signature 33 47 1.4E-7 T 28-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AM393_RS14895 6bace428608bb01467cf054b39486836 130 PRINTS PR00502 NUDIX hydrolase family signature 47 62 1.4E-7 T 28-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AM393_RS14895 6bace428608bb01467cf054b39486836 130 SUPERFAMILY SSF55811 2 126 4.74E-35 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 AM393_RS14895 6bace428608bb01467cf054b39486836 130 PRINTS PR01401 Mutator MutT protein signature 77 90 1.7E-14 T 28-03-2018 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 AM393_RS14895 6bace428608bb01467cf054b39486836 130 PRINTS PR01401 Mutator MutT protein signature 2 23 1.7E-14 T 28-03-2018 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 AM393_RS14895 6bace428608bb01467cf054b39486836 130 Gene3D G3DSA:3.90.79.10 1 129 4.2E-30 T 28-03-2018 AM393_RS14895 6bace428608bb01467cf054b39486836 130 Pfam PF00293 NUDIX domain 6 122 2.3E-19 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AM393_RS14895 6bace428608bb01467cf054b39486836 130 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 28-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AM393_RS14895 6bace428608bb01467cf054b39486836 130 TIGRFAM TIGR00586 mutt: mutator mutT protein 1 126 6.2E-58 T 28-03-2018 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 AM393_RS03535 f9c35c009f063ae6d7ac6105b87856be 424 SUPERFAMILY SSF52954 329 423 2.94E-25 T 28-03-2018 IPR004154 Anticodon-binding AM393_RS03535 f9c35c009f063ae6d7ac6105b87856be 424 SUPERFAMILY SSF55681 5 318 1.09E-104 T 28-03-2018 AM393_RS03535 f9c35c009f063ae6d7ac6105b87856be 424 Pfam PF13393 Histidyl-tRNA synthetase 10 312 1.1E-45 T 28-03-2018 AM393_RS03535 f9c35c009f063ae6d7ac6105b87856be 424 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 3 421 33.853 T 28-03-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 AM393_RS03535 f9c35c009f063ae6d7ac6105b87856be 424 Gene3D G3DSA:3.40.50.800 328 424 1.2E-17 T 28-03-2018 IPR004154 Anticodon-binding AM393_RS03535 f9c35c009f063ae6d7ac6105b87856be 424 Pfam PF03129 Anticodon binding domain 338 420 2.1E-10 T 28-03-2018 IPR004154 Anticodon-binding AM393_RS03535 f9c35c009f063ae6d7ac6105b87856be 424 Gene3D G3DSA:3.30.930.10 2 325 8.1E-74 T 28-03-2018 AM393_RS03535 f9c35c009f063ae6d7ac6105b87856be 424 PIRSF PIRSF001549 2 423 1.1E-129 T 28-03-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 AM393_RS03535 f9c35c009f063ae6d7ac6105b87856be 424 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 6 411 4.0E-156 T 28-03-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 AM393_RS18905 446d5d9d20c289150c200b72d475f4b6 403 Pfam PF04940 Sensors of blue-light using FAD 2 92 4.4E-25 T 28-03-2018 IPR007024 BLUF domain GO:0009882|GO:0071949 AM393_RS18905 446d5d9d20c289150c200b72d475f4b6 403 Pfam PF00563 EAL domain 173 387 3.4E-45 T 28-03-2018 IPR001633 EAL domain AM393_RS18905 446d5d9d20c289150c200b72d475f4b6 403 SUPERFAMILY SSF141868 171 388 6.15E-47 T 28-03-2018 IPR001633 EAL domain AM393_RS18905 446d5d9d20c289150c200b72d475f4b6 403 SUPERFAMILY SSF54975 1 133 2.32E-37 T 28-03-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 AM393_RS18905 446d5d9d20c289150c200b72d475f4b6 403 SMART SM00052 157 394 8.1E-31 T 28-03-2018 IPR001633 EAL domain AM393_RS18905 446d5d9d20c289150c200b72d475f4b6 403 Gene3D G3DSA:3.20.20.450 121 391 2.0E-45 T 28-03-2018 IPR001633 EAL domain AM393_RS18905 446d5d9d20c289150c200b72d475f4b6 403 SMART SM01034 2 94 3.9E-39 T 28-03-2018 IPR007024 BLUF domain GO:0009882|GO:0071949 AM393_RS28010 c502119ae9424edc27c6d4cfba90cc3b 250 Gene3D G3DSA:3.40.30.10 118 244 5.3E-4 T 28-03-2018 AM393_RS28010 c502119ae9424edc27c6d4cfba90cc3b 250 TIGRFAM TIGR02739 TraF: type-F conjugative transfer system pilin assembly protein TraF 15 249 2.1E-91 T 28-03-2018 IPR014110 Type-F conjugative transfer system pilin assembly protein TraF AM393_RS28010 c502119ae9424edc27c6d4cfba90cc3b 250 Pfam PF13728 F plasmid transfer operon protein 26 239 3.0E-66 T 28-03-2018 AM393_RS03690 fc1b58aeb43a080b19063cccafe4121f 417 Gene3D G3DSA:3.40.640.10 37 275 1.8E-51 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM393_RS03690 fc1b58aeb43a080b19063cccafe4121f 417 Gene3D G3DSA:3.90.1150.10 276 416 3.5E-59 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM393_RS03690 fc1b58aeb43a080b19063cccafe4121f 417 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 417 53.575 T 28-03-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0006545|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 AM393_RS03690 fc1b58aeb43a080b19063cccafe4121f 417 Pfam PF00464 Serine hydroxymethyltransferase 8 386 1.1E-189 T 28-03-2018 AM393_RS03690 fc1b58aeb43a080b19063cccafe4121f 417 PIRSF PIRSF000412 1 417 1.2E-174 T 28-03-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0006545|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 AM393_RS03690 fc1b58aeb43a080b19063cccafe4121f 417 SUPERFAMILY SSF53383 6 416 8.97E-185 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM393_RS03690 fc1b58aeb43a080b19063cccafe4121f 417 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 221 237 - T 28-03-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 AM393_RS19050 38a994b81bac484923fbf43eb69e8a30 301 Hamap MF_00973 Gluconeogenesis factor. 8 299 32.16 T 28-03-2018 IPR010119 Gluconeogenesis factor AM393_RS19050 38a994b81bac484923fbf43eb69e8a30 301 TIGRFAM TIGR01826 CofD_related: conserved hypothetical protein 12 258 6.7E-100 T 28-03-2018 IPR010119 Gluconeogenesis factor AM393_RS19050 38a994b81bac484923fbf43eb69e8a30 301 Gene3D G3DSA:3.40.50.10680 89 297 2.1E-38 T 28-03-2018 AM393_RS19050 38a994b81bac484923fbf43eb69e8a30 301 Pfam PF01933 Uncharacterised protein family UPF0052 12 286 4.3E-76 T 28-03-2018 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 AM393_RS19050 38a994b81bac484923fbf43eb69e8a30 301 SUPERFAMILY SSF142338 11 294 6.15E-85 T 28-03-2018 AM393_RS19795 ed4c96ae47405cf043d74dbcfc155c89 572 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 4 170 1.3E-41 T 28-03-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 AM393_RS19795 ed4c96ae47405cf043d74dbcfc155c89 572 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 416 435 - T 28-03-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 AM393_RS19795 ed4c96ae47405cf043d74dbcfc155c89 572 SUPERFAMILY SSF52467 182 352 1.64E-43 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AM393_RS19795 ed4c96ae47405cf043d74dbcfc155c89 572 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 379 525 1.4E-40 T 28-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AM393_RS19795 ed4c96ae47405cf043d74dbcfc155c89 572 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 192 319 1.8E-29 T 28-03-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 AM393_RS19795 ed4c96ae47405cf043d74dbcfc155c89 572 SUPERFAMILY SSF52518 2 176 1.13E-42 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold AM393_RS19795 ed4c96ae47405cf043d74dbcfc155c89 572 SUPERFAMILY SSF52518 357 557 2.21E-60 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold AM393_RS19795 ed4c96ae47405cf043d74dbcfc155c89 572 Gene3D G3DSA:3.40.50.1220 189 338 9.9E-33 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AM393_RS19795 ed4c96ae47405cf043d74dbcfc155c89 572 Gene3D G3DSA:3.40.50.970 1 188 3.5E-43 T 28-03-2018 AM393_RS19795 ed4c96ae47405cf043d74dbcfc155c89 572 Gene3D G3DSA:3.40.50.970 339 533 4.0E-43 T 28-03-2018 AM393_RS23445 1f472c628fe9d6e93d9bdbe0fe519495 423 SUPERFAMILY SSF53822 30 409 2.59E-94 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AM393_RS23445 1f472c628fe9d6e93d9bdbe0fe519495 423 Gene3D G3DSA:3.40.50.2300 26 155 1.4E-23 T 28-03-2018 AM393_RS23445 1f472c628fe9d6e93d9bdbe0fe519495 423 Gene3D G3DSA:3.40.50.2300 156 345 5.4E-29 T 28-03-2018 AM393_RS23445 1f472c628fe9d6e93d9bdbe0fe519495 423 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 290 303 1.8E-6 T 28-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AM393_RS23445 1f472c628fe9d6e93d9bdbe0fe519495 423 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 31 47 1.8E-6 T 28-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AM393_RS23445 1f472c628fe9d6e93d9bdbe0fe519495 423 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 53 69 1.8E-6 T 28-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AM393_RS23445 1f472c628fe9d6e93d9bdbe0fe519495 423 TIGRFAM TIGR03407 urea_ABC_UrtA: urea ABC transporter, urea binding protein 31 404 7.3E-178 T 28-03-2018 IPR017777 Urea ABC transporter, substrate-binding protein UrtA-like AM393_RS23445 1f472c628fe9d6e93d9bdbe0fe519495 423 Pfam PF13433 Periplasmic binding protein domain 31 407 6.2E-173 T 28-03-2018 AM393_RS16025 f2beba28ac0656e60632fc57e93e73e1 320 SMART SM00062 24 239 4.6E-28 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM393_RS16025 f2beba28ac0656e60632fc57e93e73e1 320 SUPERFAMILY SSF53850 34 305 3.98E-47 T 28-03-2018 AM393_RS16025 f2beba28ac0656e60632fc57e93e73e1 320 Gene3D G3DSA:3.40.190.10 20 119 2.5E-10 T 28-03-2018 AM393_RS16025 f2beba28ac0656e60632fc57e93e73e1 320 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 24 232 1.3E-24 T 28-03-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 AM393_RS16025 f2beba28ac0656e60632fc57e93e73e1 320 TIGRFAM TIGR01729 taurine_ABC_bnd: taurine ABC transporter, periplasmic binding protein 25 320 3.7E-152 T 28-03-2018 IPR010068 Taurine ABC transporter, substrate-binding protein TauA GO:0015734|GO:0042597 AM393_RS16025 f2beba28ac0656e60632fc57e93e73e1 320 Gene3D G3DSA:3.40.190.10 120 320 6.6E-39 T 28-03-2018 AM393_RS11095 32e6a942852f629e21db3c780dbef8f4 457 Pfam PF00206 Lyase 6 301 6.3E-100 T 28-03-2018 IPR022761 Fumarate lyase, N-terminal AM393_RS11095 32e6a942852f629e21db3c780dbef8f4 457 TIGRFAM TIGR00838 argH: argininosuccinate lyase 3 456 7.7E-214 T 28-03-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AM393_RS11095 32e6a942852f629e21db3c780dbef8f4 457 PRINTS PR00149 Fumarate lyase superfamily signature 103 121 2.9E-28 T 28-03-2018 IPR000362 Fumarate lyase family AM393_RS11095 32e6a942852f629e21db3c780dbef8f4 457 PRINTS PR00149 Fumarate lyase superfamily signature 232 259 2.9E-28 T 28-03-2018 IPR000362 Fumarate lyase family AM393_RS11095 32e6a942852f629e21db3c780dbef8f4 457 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 2.9E-28 T 28-03-2018 IPR000362 Fumarate lyase family AM393_RS11095 32e6a942852f629e21db3c780dbef8f4 457 PRINTS PR00149 Fumarate lyase superfamily signature 276 292 2.9E-28 T 28-03-2018 IPR000362 Fumarate lyase family AM393_RS11095 32e6a942852f629e21db3c780dbef8f4 457 ProSitePatterns PS00163 Fumarate lyases signature. 276 285 - T 28-03-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 AM393_RS11095 32e6a942852f629e21db3c780dbef8f4 457 Hamap MF_00006 Argininosuccinate lyase [argH]. 2 454 41.292 T 28-03-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AM393_RS11095 32e6a942852f629e21db3c780dbef8f4 457 SUPERFAMILY SSF48557 3 456 4.08E-143 T 28-03-2018 IPR008948 L-Aspartase-like GO:0003824 AM393_RS11095 32e6a942852f629e21db3c780dbef8f4 457 PRINTS PR00145 Argininosuccinate lyase family signature 143 163 7.6E-68 T 28-03-2018 AM393_RS11095 32e6a942852f629e21db3c780dbef8f4 457 PRINTS PR00145 Argininosuccinate lyase family signature 232 256 7.6E-68 T 28-03-2018 AM393_RS11095 32e6a942852f629e21db3c780dbef8f4 457 PRINTS PR00145 Argininosuccinate lyase family signature 102 124 7.6E-68 T 28-03-2018 AM393_RS11095 32e6a942852f629e21db3c780dbef8f4 457 PRINTS PR00145 Argininosuccinate lyase family signature 311 330 7.6E-68 T 28-03-2018 AM393_RS11095 32e6a942852f629e21db3c780dbef8f4 457 PRINTS PR00145 Argininosuccinate lyase family signature 194 210 7.6E-68 T 28-03-2018 AM393_RS11095 32e6a942852f629e21db3c780dbef8f4 457 PRINTS PR00145 Argininosuccinate lyase family signature 276 292 7.6E-68 T 28-03-2018 AM393_RS11095 32e6a942852f629e21db3c780dbef8f4 457 Gene3D G3DSA:1.10.40.30 376 433 3.2E-27 T 28-03-2018 AM393_RS11095 32e6a942852f629e21db3c780dbef8f4 457 Gene3D G3DSA:1.10.275.10 2 107 3.8E-32 T 28-03-2018 IPR024083 Fumarase/histidase, N-terminal AM393_RS11095 32e6a942852f629e21db3c780dbef8f4 457 Pfam PF14698 Argininosuccinate lyase C-terminal 364 431 4.2E-25 T 28-03-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AM393_RS11095 32e6a942852f629e21db3c780dbef8f4 457 Gene3D G3DSA:1.20.200.10 108 375 4.7E-95 T 28-03-2018 AM393_RS18050 3379eb03a0da93e4167039bb1301181c 701 Pfam PF02554 Carbon starvation protein CstA 32 404 2.4E-170 T 28-03-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 AM393_RS18050 3379eb03a0da93e4167039bb1301181c 701 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 469 596 1.3E-34 T 28-03-2018 IPR025299 CstA, C-terminal domain AM393_RS05060 72d8db508c7d9465e07bf3c0fbc04c2c 591 SUPERFAMILY SSF50443 356 590 1.54E-126 T 28-03-2018 IPR004216 L-fucose/L-arabinose isomerase, C-terminal AM393_RS05060 72d8db508c7d9465e07bf3c0fbc04c2c 591 TIGRFAM TIGR01089 fucI: L-fucose isomerase 5 590 0.0 T 28-03-2018 IPR005763 L-fucose isomerase GO:0005737|GO:0008736|GO:0019317|GO:0030145 KEGG: 00051+5.3.1.25 AM393_RS05060 72d8db508c7d9465e07bf3c0fbc04c2c 591 Pfam PF02952 L-fucose isomerase, C-terminal domain 390 554 5.1E-54 T 28-03-2018 IPR015888 L-fucose isomerase, C-terminal GO:0005737|GO:0006004|GO:0008736 KEGG: 00051+5.3.1.25 AM393_RS05060 72d8db508c7d9465e07bf3c0fbc04c2c 591 SUPERFAMILY SSF53743 2 355 1.09E-151 T 28-03-2018 IPR009015 L-fucose isomerase, N-terminal/central domain GO:0005737|GO:0005996|GO:0016861 AM393_RS05060 72d8db508c7d9465e07bf3c0fbc04c2c 591 Gene3D G3DSA:3.40.275.10 177 339 1.8E-62 T 28-03-2018 AM393_RS05060 72d8db508c7d9465e07bf3c0fbc04c2c 591 Gene3D G3DSA:3.20.14.10 341 589 1.3E-117 T 28-03-2018 AM393_RS05060 72d8db508c7d9465e07bf3c0fbc04c2c 591 Gene3D G3DSA:3.40.50.1070 5 175 2.9E-70 T 28-03-2018 AM393_RS05060 72d8db508c7d9465e07bf3c0fbc04c2c 591 Hamap MF_01254 L-fucose isomerase [fucI]. 3 591 70.932 T 28-03-2018 IPR005763 L-fucose isomerase GO:0005737|GO:0008736|GO:0019317|GO:0030145 KEGG: 00051+5.3.1.25 AM393_RS05060 72d8db508c7d9465e07bf3c0fbc04c2c 591 Pfam PF07882 L-fucose isomerase, second N-terminal domain 175 354 2.1E-81 T 28-03-2018 IPR012889 L-fucose isomerase, N-terminal-2 GO:0005737|GO:0006004|GO:0008736 KEGG: 00051+5.3.1.25 AM393_RS05060 72d8db508c7d9465e07bf3c0fbc04c2c 591 Pfam PF07881 L-fucose isomerase, first N-terminal domain 7 174 1.6E-83 T 28-03-2018 IPR012888 L-fucose isomerase, N-terminal-1 GO:0005737|GO:0006004|GO:0008736 KEGG: 00051+5.3.1.25 AM393_RS28710 6bd77f11fcd3fb09f8c5ac3361fc0012 195 SUPERFAMILY SSF52540 4 81 1.61E-5 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS28710 6bd77f11fcd3fb09f8c5ac3361fc0012 195 SUPERFAMILY SSF52540 110 144 1.61E-5 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS28710 6bd77f11fcd3fb09f8c5ac3361fc0012 195 Gene3D G3DSA:3.40.50.300 1 185 1.4E-9 T 28-03-2018 AM393_RS28710 6bd77f11fcd3fb09f8c5ac3361fc0012 195 Pfam PF04317 YcjX-like family, DUF463 20 194 2.9E-68 T 28-03-2018 IPR007413 Protein of unknown function DUF463, YcjX-like protein AM393_RS26165 ecece720f4f6c5610cb2d8c729c4e977 200 Gene3D G3DSA:2.60.120.10 45 187 5.0E-30 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AM393_RS26165 ecece720f4f6c5610cb2d8c729c4e977 200 SUPERFAMILY SSF51182 8 194 1.45E-53 T 28-03-2018 IPR011051 RmlC-like cupin domain AM393_RS26165 ecece720f4f6c5610cb2d8c729c4e977 200 Gene3D G3DSA:1.20.5.440 4 44 2.0E-9 T 28-03-2018 AM393_RS26165 ecece720f4f6c5610cb2d8c729c4e977 200 Pfam PF05995 Cysteine dioxygenase type I 7 159 2.9E-9 T 28-03-2018 IPR010300 Cysteine dioxygenase type I GO:0005506|GO:0016702|GO:0055114 KEGG: 00270+1.13.11.20|KEGG: 00430+1.13.11.20|MetaCyc: PWY-5331|Reactome: R-HSA-1614558 AM393_RS26550 7c160f6a4f29b4f1790e8244ae610eb6 310 Gene3D G3DSA:3.40.1190.20 1 308 6.6E-53 T 28-03-2018 IPR029056 Ribokinase-like AM393_RS26550 7c160f6a4f29b4f1790e8244ae610eb6 310 Pfam PF00294 pfkB family carbohydrate kinase 20 296 1.4E-56 T 28-03-2018 IPR011611 Carbohydrate kinase PfkB AM393_RS26550 7c160f6a4f29b4f1790e8244ae610eb6 310 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 250 263 - T 28-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AM393_RS26550 7c160f6a4f29b4f1790e8244ae610eb6 310 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 38 62 - T 28-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AM393_RS26550 7c160f6a4f29b4f1790e8244ae610eb6 310 SUPERFAMILY SSF53613 4 295 1.56E-61 T 28-03-2018 IPR029056 Ribokinase-like AM393_RS26550 7c160f6a4f29b4f1790e8244ae610eb6 310 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 4 305 1.4E-92 T 28-03-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 AM393_RS26550 7c160f6a4f29b4f1790e8244ae610eb6 310 PIRSF PIRSF000535 1 308 3.5E-102 T 28-03-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 AM393_RS09835 e7fd9453c37dbb80d3756976430de179 255 Gene3D G3DSA:3.20.20.70 1 255 5.6E-102 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM393_RS09835 e7fd9453c37dbb80d3756976430de179 255 ProSitePatterns PS00171 Triosephosphate isomerase active site. 165 175 - T 28-03-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM393_RS09835 e7fd9453c37dbb80d3756976430de179 255 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 249 40.874 T 28-03-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM393_RS09835 e7fd9453c37dbb80d3756976430de179 255 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 240 1.4E-106 T 28-03-2018 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM393_RS09835 e7fd9453c37dbb80d3756976430de179 255 SUPERFAMILY SSF51351 1 248 3.4E-92 T 28-03-2018 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM393_RS09835 e7fd9453c37dbb80d3756976430de179 255 Pfam PF00121 Triosephosphate isomerase 5 246 3.8E-94 T 28-03-2018 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM393_RS21740 f6e13d6aeecc1a5ed6045cbab47fe633 389 Gene3D G3DSA:1.25.40.10 21 121 4.0E-9 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM393_RS21740 f6e13d6aeecc1a5ed6045cbab47fe633 389 Hamap MF_00994 Lipopolysaccharide assembly protein B [lapB]. 4 387 36.462 T 28-03-2018 IPR030865 Lipopolysaccharide assembly protein B GO:0008653 AM393_RS21740 f6e13d6aeecc1a5ed6045cbab47fe633 389 Pfam PF14559 Tetratricopeptide repeat 191 245 7.1E-6 T 28-03-2018 AM393_RS21740 f6e13d6aeecc1a5ed6045cbab47fe633 389 Gene3D G3DSA:1.25.40.10 122 166 5.4E-7 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM393_RS21740 f6e13d6aeecc1a5ed6045cbab47fe633 389 SUPERFAMILY SSF48452 109 279 3.03E-17 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM393_RS21740 f6e13d6aeecc1a5ed6045cbab47fe633 389 Gene3D G3DSA:1.25.40.10 265 352 0.0087 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM393_RS21740 f6e13d6aeecc1a5ed6045cbab47fe633 389 Gene3D G3DSA:1.25.40.10 167 264 8.2E-16 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM393_RS21740 f6e13d6aeecc1a5ed6045cbab47fe633 389 SMART SM00028 107 140 400.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AM393_RS21740 f6e13d6aeecc1a5ed6045cbab47fe633 389 SMART SM00028 69 102 69.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AM393_RS21740 f6e13d6aeecc1a5ed6045cbab47fe633 389 SMART SM00028 282 315 260.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AM393_RS21740 f6e13d6aeecc1a5ed6045cbab47fe633 389 SMART SM00028 180 213 12.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AM393_RS21740 f6e13d6aeecc1a5ed6045cbab47fe633 389 SMART SM00028 214 247 0.074 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AM393_RS27840 736c010e8c5c56df94bcdcc42ba1c38c 254 SUPERFAMILY SSF53098 72 192 1.29E-5 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM393_RS27840 736c010e8c5c56df94bcdcc42ba1c38c 254 Pfam PF13610 DDE domain 73 211 3.9E-50 T 28-03-2018 IPR032874 DDE domain AM393_RS27840 736c010e8c5c56df94bcdcc42ba1c38c 254 Gene3D G3DSA:3.30.420.10 62 209 2.6E-12 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM393_RS28820 736c010e8c5c56df94bcdcc42ba1c38c 254 SUPERFAMILY SSF53098 72 192 1.29E-5 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM393_RS28820 736c010e8c5c56df94bcdcc42ba1c38c 254 Pfam PF13610 DDE domain 73 211 3.9E-50 T 28-03-2018 IPR032874 DDE domain AM393_RS28820 736c010e8c5c56df94bcdcc42ba1c38c 254 Gene3D G3DSA:3.30.420.10 62 209 2.6E-12 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM393_RS17930 9b28189c93523bee07059371b1844060 514 ProSitePatterns PS00211 ABC transporters family signature. 415 429 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS17930 9b28189c93523bee07059371b1844060 514 Pfam PF00005 ABC transporter 285 442 1.2E-22 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS17930 9b28189c93523bee07059371b1844060 514 Pfam PF00005 ABC transporter 33 182 2.5E-28 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS17930 9b28189c93523bee07059371b1844060 514 SUPERFAMILY SSF52540 16 237 2.88E-57 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS17930 9b28189c93523bee07059371b1844060 514 SUPERFAMILY SSF52540 258 501 3.74E-46 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS17930 9b28189c93523bee07059371b1844060 514 Gene3D G3DSA:3.40.50.300 14 241 2.9E-54 T 28-03-2018 AM393_RS17930 9b28189c93523bee07059371b1844060 514 Gene3D G3DSA:3.40.50.300 265 506 1.7E-39 T 28-03-2018 AM393_RS17930 9b28189c93523bee07059371b1844060 514 SMART SM00382 294 491 2.1E-5 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS17930 9b28189c93523bee07059371b1844060 514 SMART SM00382 42 230 1.3E-13 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS06725 faa52e8dae3526e0f2265eeae776d1b3 727 TIGRFAM TIGR03904 SAM_YgiQ: uncharacterized radical SAM protein YgiQ 29 644 6.8E-266 T 28-03-2018 IPR022946 Uncharacterised protein family UPF0313 AM393_RS06725 faa52e8dae3526e0f2265eeae776d1b3 727 SMART SM00729 376 626 8.3E-5 T 28-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AM393_RS06725 faa52e8dae3526e0f2265eeae776d1b3 727 Hamap MF_01251 UPF0313 protein YgiQ [ygiQ]. 29 646 50.768 T 28-03-2018 IPR022946 Uncharacterised protein family UPF0313 AM393_RS06725 faa52e8dae3526e0f2265eeae776d1b3 727 SUPERFAMILY SSF102114 371 440 6.02E-11 T 28-03-2018 AM393_RS06725 faa52e8dae3526e0f2265eeae776d1b3 727 SUPERFAMILY SSF102114 470 647 6.02E-11 T 28-03-2018 AM393_RS06725 faa52e8dae3526e0f2265eeae776d1b3 727 Pfam PF08497 Radical SAM N-terminal 29 379 5.2E-145 T 28-03-2018 IPR013704 Uncharacterised protein family UPF0313, N-terminal AM393_RS06725 faa52e8dae3526e0f2265eeae776d1b3 727 Pfam PF04055 Radical SAM superfamily 380 585 7.2E-20 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AM393_RS06725 faa52e8dae3526e0f2265eeae776d1b3 727 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 380 400 - T 28-03-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 AM393_RS06725 faa52e8dae3526e0f2265eeae776d1b3 727 Pfam PF11842 Domain of unknown function (DUF3362) 594 710 1.4E-43 T 28-03-2018 IPR024560 Uncharacterised protein family UPF0313, C-terminal AM393_RS06725 faa52e8dae3526e0f2265eeae776d1b3 727 Gene3D G3DSA:3.20.20.70 306 725 1.8E-30 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM393_RS11685 728829054ec6249f1c5d4249b2b2eca4 181 Gene3D G3DSA:3.30.70.940 6 119 8.2E-42 T 28-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AM393_RS11685 728829054ec6249f1c5d4249b2b2eca4 181 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 6 181 24.812 T 28-03-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 AM393_RS11685 728829054ec6249f1c5d4249b2b2eca4 181 SUPERFAMILY SSF82679 6 116 4.32E-40 T 28-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AM393_RS11685 728829054ec6249f1c5d4249b2b2eca4 181 Pfam PF00467 KOW motif 130 162 5.5E-8 T 28-03-2018 IPR005824 KOW AM393_RS11685 728829054ec6249f1c5d4249b2b2eca4 181 SUPERFAMILY SSF50104 125 180 4.66E-20 T 28-03-2018 IPR008991 Translation protein SH3-like domain AM393_RS11685 728829054ec6249f1c5d4249b2b2eca4 181 PRINTS PR00338 Transcription termination factor NUSG signature 61 73 1.9E-21 T 28-03-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 AM393_RS11685 728829054ec6249f1c5d4249b2b2eca4 181 PRINTS PR00338 Transcription termination factor NUSG signature 139 154 1.9E-21 T 28-03-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 AM393_RS11685 728829054ec6249f1c5d4249b2b2eca4 181 PRINTS PR00338 Transcription termination factor NUSG signature 157 173 1.9E-21 T 28-03-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 AM393_RS11685 728829054ec6249f1c5d4249b2b2eca4 181 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 9 180 2.8E-71 T 28-03-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 AM393_RS11685 728829054ec6249f1c5d4249b2b2eca4 181 ProSitePatterns PS01014 Transcription termination factor nusG signature. 164 173 - T 28-03-2018 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site AM393_RS11685 728829054ec6249f1c5d4249b2b2eca4 181 SMART SM00739 127 154 7.9E-7 T 28-03-2018 IPR005824 KOW AM393_RS11685 728829054ec6249f1c5d4249b2b2eca4 181 Pfam PF02357 Transcription termination factor nusG 7 112 1.9E-27 T 28-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AM393_RS11685 728829054ec6249f1c5d4249b2b2eca4 181 SMART SM00738 6 115 8.6E-51 T 28-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AM393_RS11685 728829054ec6249f1c5d4249b2b2eca4 181 Gene3D G3DSA:2.30.30.30 122 181 4.8E-22 T 28-03-2018 IPR014722 Ribosomal protein L2 domain 2 AM393_RS09395 e17fe40153589a122bcf1bdc06351df0 689 Gene3D G3DSA:1.10.730.10 575 684 3.9E-10 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM393_RS09395 e17fe40153589a122bcf1bdc06351df0 689 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 6 551 8.8E-216 T 28-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AM393_RS09395 e17fe40153589a122bcf1bdc06351df0 689 SUPERFAMILY SSF109604 339 511 2.2E-17 T 28-03-2018 AM393_RS09395 e17fe40153589a122bcf1bdc06351df0 689 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 1 689 0.0 T 28-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AM393_RS09395 e17fe40153589a122bcf1bdc06351df0 689 Pfam PF05746 DALR anticodon binding domain 582 679 2.2E-7 T 28-03-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 AM393_RS09395 e17fe40153589a122bcf1bdc06351df0 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 318 334 5.5E-37 T 28-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AM393_RS09395 e17fe40153589a122bcf1bdc06351df0 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 394 413 5.5E-37 T 28-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AM393_RS09395 e17fe40153589a122bcf1bdc06351df0 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 50 62 5.5E-37 T 28-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AM393_RS09395 e17fe40153589a122bcf1bdc06351df0 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 246 261 5.5E-37 T 28-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AM393_RS09395 e17fe40153589a122bcf1bdc06351df0 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 7 20 5.5E-37 T 28-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AM393_RS09395 e17fe40153589a122bcf1bdc06351df0 689 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 3 688 27.029 T 28-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AM393_RS00740 9a66fb863ad453d32fa5d8fe89f1eb42 247 Hamap MF_00795 Copper homeostasis protein CutC [cutC]. 2 243 38.081 T 28-03-2018 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 Reactome: R-HSA-936837 AM393_RS00740 9a66fb863ad453d32fa5d8fe89f1eb42 247 Pfam PF03932 CutC family 3 200 1.8E-75 T 28-03-2018 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 Reactome: R-HSA-936837 AM393_RS00740 9a66fb863ad453d32fa5d8fe89f1eb42 247 Gene3D G3DSA:3.20.20.380 1 247 1.6E-91 T 28-03-2018 AM393_RS00740 9a66fb863ad453d32fa5d8fe89f1eb42 247 SUPERFAMILY SSF110395 3 244 9.55E-73 T 28-03-2018 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 Reactome: R-HSA-936837 AM393_RS25465 f1bab603d8a5068e0a1ef982de3d4dc1 155 Pfam PF05433 Glycine zipper 2TM domain 62 102 1.1E-7 T 28-03-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 AM393_RS21065 fd5054b9ae128ded7b51bba2b59c6387 502 SUPERFAMILY SSF143968 326 483 7.19E-34 T 28-03-2018 AM393_RS21065 fd5054b9ae128ded7b51bba2b59c6387 502 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 18 433 1.6E-97 T 28-03-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 AM393_RS21065 fd5054b9ae128ded7b51bba2b59c6387 502 SUPERFAMILY SSF50475 6 321 1.37E-63 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 AM393_RS21065 fd5054b9ae128ded7b51bba2b59c6387 502 Gene3D G3DSA:3.40.1670.10 323 475 8.4E-32 T 28-03-2018 AM393_RS11060 e7497b5741a36c8a7466b691fd3f07ff 287 SUPERFAMILY SSF46689 173 221 2.81E-5 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS11060 e7497b5741a36c8a7466b691fd3f07ff 287 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 225 267 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM393_RS11060 e7497b5741a36c8a7466b691fd3f07ff 287 Gene3D G3DSA:2.60.120.10 39 225 8.7E-17 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AM393_RS11060 e7497b5741a36c8a7466b691fd3f07ff 287 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 240 255 4.2E-6 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM393_RS11060 e7497b5741a36c8a7466b691fd3f07ff 287 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 255 271 4.2E-6 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM393_RS11060 e7497b5741a36c8a7466b691fd3f07ff 287 SUPERFAMILY SSF46689 224 276 8.96E-15 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS11060 e7497b5741a36c8a7466b691fd3f07ff 287 Pfam PF12833 Helix-turn-helix domain 194 273 2.0E-22 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM393_RS11060 e7497b5741a36c8a7466b691fd3f07ff 287 Gene3D G3DSA:1.10.10.60 226 280 5.3E-19 T 28-03-2018 AM393_RS11060 e7497b5741a36c8a7466b691fd3f07ff 287 SMART SM00342 188 271 3.8E-31 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM393_RS00265 1c52394046f78ac67f57c212c4f9356b 203 Gene3D G3DSA:1.10.530.10 21 203 2.6E-29 T 28-03-2018 AM393_RS00265 1c52394046f78ac67f57c212c4f9356b 203 SUPERFAMILY SSF53955 37 198 9.19E-29 T 28-03-2018 IPR023346 Lysozyme-like domain AM393_RS00265 1c52394046f78ac67f57c212c4f9356b 203 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 60 88 - T 28-03-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 AM393_RS00265 1c52394046f78ac67f57c212c4f9356b 203 Hamap MF_01381 Endo-type membrane-bound lytic murein transglycosylase A [emtA]. 1 203 59.808 T 28-03-2018 IPR023946 Endo-type membrane-bound lytic murein transglycosylase A GO:0008932|GO:0009279|GO:0016837|GO:0016998 AM393_RS00265 1c52394046f78ac67f57c212c4f9356b 203 Pfam PF01464 Transglycosylase SLT domain 43 168 3.8E-28 T 28-03-2018 IPR008258 Transglycosylase SLT domain 1 AM393_RS08985 31965dd28ebee143f9e1d25073303af0 300 Hamap MF_01870 Probable 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD [arnD]. 1 295 62.292 T 28-03-2018 IPR023557 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD, probable GO:0016811 AM393_RS08985 31965dd28ebee143f9e1d25073303af0 300 Pfam PF01522 Polysaccharide deacetylase 15 166 1.2E-8 T 28-03-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 AM393_RS08985 31965dd28ebee143f9e1d25073303af0 300 Gene3D G3DSA:3.20.20.370 2 268 9.8E-28 T 28-03-2018 AM393_RS08985 31965dd28ebee143f9e1d25073303af0 300 SUPERFAMILY SSF88713 85 268 5.28E-27 T 28-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AM393_RS08985 31965dd28ebee143f9e1d25073303af0 300 SUPERFAMILY SSF88713 14 41 5.28E-27 T 28-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AM393_RS02640 a83c32a1291e55cc057b05a20f6ea6d8 485 Pfam PF00361 Proton-conducting membrane transporter 122 420 1.4E-88 T 28-03-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM393_RS02640 a83c32a1291e55cc057b05a20f6ea6d8 485 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 9 475 7.4E-145 T 28-03-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 AM393_RS02640 a83c32a1291e55cc057b05a20f6ea6d8 485 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 6 475 17.82 T 28-03-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 AM393_RS29050 8f2acb25af98c46979a3ac9b8e88c44a 186 Gene3D G3DSA:1.20.5.40 108 137 2.9E-18 T 28-03-2018 AM393_RS29050 8f2acb25af98c46979a3ac9b8e88c44a 186 Gene3D G3DSA:3.40.50.1390 4 107 2.1E-33 T 28-03-2018 AM393_RS29050 8f2acb25af98c46979a3ac9b8e88c44a 186 SUPERFAMILY SSF53041 6 139 9.16E-41 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AM393_RS29050 8f2acb25af98c46979a3ac9b8e88c44a 186 Pfam PF02796 Helix-turn-helix domain of resolvase 141 184 3.9E-14 T 28-03-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 AM393_RS29050 8f2acb25af98c46979a3ac9b8e88c44a 186 Pfam PF00239 Resolvase, N terminal domain 6 139 7.3E-40 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AM393_RS29050 8f2acb25af98c46979a3ac9b8e88c44a 186 SUPERFAMILY SSF46689 141 183 1.03E-8 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS29050 8f2acb25af98c46979a3ac9b8e88c44a 186 ProSitePatterns PS00397 Site-specific recombinases active site. 8 16 - T 28-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 AM393_RS29050 8f2acb25af98c46979a3ac9b8e88c44a 186 Gene3D G3DSA:1.10.10.60 139 186 4.9E-9 T 28-03-2018 AM393_RS29050 8f2acb25af98c46979a3ac9b8e88c44a 186 SMART SM00857 5 139 8.1E-49 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AM393_RS29050 8f2acb25af98c46979a3ac9b8e88c44a 186 ProSitePatterns PS00398 Site-specific recombinases signature 2. 55 67 - T 28-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 AM393_RS11410 465454f2f4c8abc98905012134828cae 274 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 1 274 39.768 T 28-03-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 AM393_RS11410 465454f2f4c8abc98905012134828cae 274 Pfam PF01678 Diaminopimelate epimerase 152 266 5.9E-33 T 28-03-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 AM393_RS11410 465454f2f4c8abc98905012134828cae 274 Pfam PF01678 Diaminopimelate epimerase 3 123 9.7E-35 T 28-03-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 AM393_RS11410 465454f2f4c8abc98905012134828cae 274 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 64 78 - T 28-03-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 AM393_RS11410 465454f2f4c8abc98905012134828cae 274 SUPERFAMILY SSF54506 2 273 1.26E-56 T 28-03-2018 AM393_RS11410 465454f2f4c8abc98905012134828cae 274 Gene3D G3DSA:3.10.310.10 1 124 3.7E-48 T 28-03-2018 AM393_RS11410 465454f2f4c8abc98905012134828cae 274 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 1 273 1.2E-103 T 28-03-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 AM393_RS11410 465454f2f4c8abc98905012134828cae 274 Gene3D G3DSA:3.10.310.10 125 261 6.7E-51 T 28-03-2018 AM393_RS02320 b7653a791ed323b2289679e55d5c3b00 398 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 8 390 2.0E-149 T 28-03-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 AM393_RS02320 b7653a791ed323b2289679e55d5c3b00 398 Gene3D G3DSA:1.20.1250.20 3 196 5.4E-36 T 28-03-2018 AM393_RS02320 b7653a791ed323b2289679e55d5c3b00 398 Gene3D G3DSA:1.20.1250.20 208 398 1.4E-17 T 28-03-2018 AM393_RS02320 b7653a791ed323b2289679e55d5c3b00 398 TIGRFAM TIGR00880 2_A_01_02: multidrug resistance protein 52 188 2.1E-39 T 28-03-2018 IPR004734 Multidrug resistance protein GO:0015238|GO:0015893|GO:0016021 Reactome: R-HSA-442660 AM393_RS02320 b7653a791ed323b2289679e55d5c3b00 398 Pfam PF07690 Major Facilitator Superfamily 16 359 6.5E-45 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS02320 b7653a791ed323b2289679e55d5c3b00 398 SUPERFAMILY SSF103473 10 395 1.96E-67 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS27930 cecb323c2376c43b9ad8a09cd08ef377 507 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 323 347 2.7E-15 T 28-03-2018 AM393_RS27930 cecb323c2376c43b9ad8a09cd08ef377 507 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 186 202 2.7E-15 T 28-03-2018 AM393_RS27930 cecb323c2376c43b9ad8a09cd08ef377 507 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 287 299 2.7E-15 T 28-03-2018 AM393_RS27930 cecb323c2376c43b9ad8a09cd08ef377 507 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 210 224 2.7E-15 T 28-03-2018 AM393_RS27930 cecb323c2376c43b9ad8a09cd08ef377 507 TIGRFAM TIGR00497 hsdM: type I restriction-modification system, M subunit 9 484 4.3E-85 T 28-03-2018 IPR004546 Restriction endonuclease, type I, HsdM GO:0003677|GO:0009007|GO:0009307 AM393_RS27930 cecb323c2376c43b9ad8a09cd08ef377 507 Pfam PF12161 HsdM N-terminal domain 11 148 6.2E-22 T 28-03-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain AM393_RS27930 cecb323c2376c43b9ad8a09cd08ef377 507 SUPERFAMILY SSF53335 9 506 8.44E-138 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM393_RS27930 cecb323c2376c43b9ad8a09cd08ef377 507 Pfam PF02384 N-6 DNA Methylase 164 471 6.3E-108 T 28-03-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 AM393_RS27930 cecb323c2376c43b9ad8a09cd08ef377 507 Gene3D G3DSA:3.40.50.150 184 465 1.1E-71 T 28-03-2018 AM393_RS04040 9505fdd40645a873b3f6963335a93e58 158 Gene3D G3DSA:3.30.530.20 14 157 8.7E-31 T 28-03-2018 IPR023393 START-like domain AM393_RS04040 9505fdd40645a873b3f6963335a93e58 158 SUPERFAMILY SSF55961 14 156 1.8E-33 T 28-03-2018 AM393_RS04040 9505fdd40645a873b3f6963335a93e58 158 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 23 148 1.2E-30 T 28-03-2018 IPR005031 Coenzyme Q-binding protein COQ10, START domain Reactome: R-HSA-611105 AM393_RS10930 bc154f9059eb9e6d7ff24b9718d46615 206 PIRSF PIRSF000349 1 206 4.0E-80 T 28-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AM393_RS10930 bc154f9059eb9e6d7ff24b9718d46615 206 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 2 89 1.2E-33 T 28-03-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AM393_RS10930 bc154f9059eb9e6d7ff24b9718d46615 206 Gene3D G3DSA:1.10.287.990 20 90 7.5E-31 T 28-03-2018 AM393_RS10930 bc154f9059eb9e6d7ff24b9718d46615 206 SUPERFAMILY SSF54719 95 204 3.8E-45 T 28-03-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AM393_RS10930 bc154f9059eb9e6d7ff24b9718d46615 206 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 168 175 - T 28-03-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AM393_RS10930 bc154f9059eb9e6d7ff24b9718d46615 206 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 96 201 3.5E-40 T 28-03-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AM393_RS10930 bc154f9059eb9e6d7ff24b9718d46615 206 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 2.7E-27 T 28-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AM393_RS10930 bc154f9059eb9e6d7ff24b9718d46615 206 PRINTS PR01703 Manganese superoxide dismutase signature 124 132 2.7E-27 T 28-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AM393_RS10930 bc154f9059eb9e6d7ff24b9718d46615 206 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 2.7E-27 T 28-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AM393_RS10930 bc154f9059eb9e6d7ff24b9718d46615 206 PRINTS PR01703 Manganese superoxide dismutase signature 73 86 2.7E-27 T 28-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AM393_RS10930 bc154f9059eb9e6d7ff24b9718d46615 206 PRINTS PR01703 Manganese superoxide dismutase signature 166 178 2.7E-27 T 28-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AM393_RS10930 bc154f9059eb9e6d7ff24b9718d46615 206 SUPERFAMILY SSF46609 1 90 7.07E-37 T 28-03-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AM393_RS02500 2a1a3e9e1f7f91667926fcf6ab5b3e90 242 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 14 240 38.33 T 28-03-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 AM393_RS02500 2a1a3e9e1f7f91667926fcf6ab5b3e90 242 Gene3D G3DSA:3.40.50.150 2 240 4.4E-47 T 28-03-2018 AM393_RS02500 2a1a3e9e1f7f91667926fcf6ab5b3e90 242 Pfam PF13489 Methyltransferase domain 57 170 3.3E-23 T 28-03-2018 AM393_RS02500 2a1a3e9e1f7f91667926fcf6ab5b3e90 242 SUPERFAMILY SSF53335 18 222 4.92E-45 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM393_RS02500 2a1a3e9e1f7f91667926fcf6ab5b3e90 242 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 16 234 1.8E-90 T 28-03-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 AM393_RS04720 edc6b835a521722a1fcc21bcab101bff 272 Pfam PF01497 Periplasmic binding protein 23 247 7.3E-27 T 28-03-2018 IPR002491 ABC transporter periplasmic binding domain GO:0005488 AM393_RS04720 edc6b835a521722a1fcc21bcab101bff 272 SUPERFAMILY SSF53807 19 265 4.32E-47 T 28-03-2018 AM393_RS04720 edc6b835a521722a1fcc21bcab101bff 272 Gene3D G3DSA:3.40.50.1980 126 267 8.5E-23 T 28-03-2018 AM393_RS04720 edc6b835a521722a1fcc21bcab101bff 272 Gene3D G3DSA:3.40.50.1980 18 125 4.0E-24 T 28-03-2018 AM393_RS19235 1f3c6f174f62d69c7ed8af5df16e66b6 526 Gene3D G3DSA:3.40.720.10 209 488 3.6E-18 T 28-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AM393_RS19235 1f3c6f174f62d69c7ed8af5df16e66b6 526 SUPERFAMILY SSF53649 220 487 8.18E-17 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AM393_RS19235 1f3c6f174f62d69c7ed8af5df16e66b6 526 Pfam PF00884 Sulfatase 219 483 1.8E-39 T 28-03-2018 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 AM393_RS08220 1d39cb39316a9c2998ec292730c96ef2 38 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 38 5.9E-22 T 28-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS08220 1d39cb39316a9c2998ec292730c96ef2 38 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 9 38 3.0E-10 T 28-03-2018 AM393_RS08220 1d39cb39316a9c2998ec292730c96ef2 38 Pfam PF00444 Ribosomal protein L36 1 38 2.3E-20 T 28-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS08220 1d39cb39316a9c2998ec292730c96ef2 38 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 38 17.829 T 28-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS08220 1d39cb39316a9c2998ec292730c96ef2 38 SUPERFAMILY SSF57840 1 38 5.89E-17 T 28-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS08220 1d39cb39316a9c2998ec292730c96ef2 38 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 37 - T 28-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS20150 74f646d4e0738fc17f55b0a4362adbaf 336 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 80 99 - T 28-03-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 AM393_RS20150 74f646d4e0738fc17f55b0a4362adbaf 336 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 2 336 51.023 T 28-03-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 AM393_RS20150 74f646d4e0738fc17f55b0a4362adbaf 336 PIRSF PIRSF000164 11 336 2.4E-97 T 28-03-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 AM393_RS20150 74f646d4e0738fc17f55b0a4362adbaf 336 SUPERFAMILY SSF51395 1 334 2.89E-103 T 28-03-2018 AM393_RS20150 74f646d4e0738fc17f55b0a4362adbaf 336 Pfam PF01180 Dihydroorotate dehydrogenase 47 335 2.6E-91 T 28-03-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 AM393_RS20150 74f646d4e0738fc17f55b0a4362adbaf 336 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 3 336 1.9E-162 T 28-03-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 AM393_RS20150 74f646d4e0738fc17f55b0a4362adbaf 336 Gene3D G3DSA:3.20.20.70 1 336 6.6E-77 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM393_RS20150 74f646d4e0738fc17f55b0a4362adbaf 336 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 292 312 - T 28-03-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 AM393_RS08955 cca26270b6f4b6b8e02517d839d5e153 185 Gene3D G3DSA:3.40.1000.10 41 185 3.0E-17 T 28-03-2018 AM393_RS08955 cca26270b6f4b6b8e02517d839d5e153 185 Pfam PF08786 DcrB 51 181 6.7E-31 T 28-03-2018 IPR014894 Protein DcrB AM393_RS21280 6203f5ff52bf4bd465f66c0a3c8654cf 417 SUPERFAMILY SSF51445 372 403 2.0E-70 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily AM393_RS21280 6203f5ff52bf4bd465f66c0a3c8654cf 417 SUPERFAMILY SSF51445 20 276 2.0E-70 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily AM393_RS21280 6203f5ff52bf4bd465f66c0a3c8654cf 417 Gene3D G3DSA:3.20.20.80 14 417 5.2E-78 T 28-03-2018 AM393_RS21280 6203f5ff52bf4bd465f66c0a3c8654cf 417 SUPERFAMILY SSF54556 289 356 5.27E-5 T 28-03-2018 IPR029070 Chitinase insertion domain AM393_RS21280 6203f5ff52bf4bd465f66c0a3c8654cf 417 Pfam PF00704 Glycosyl hydrolases family 18 26 400 4.5E-65 T 28-03-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 AM393_RS21280 6203f5ff52bf4bd465f66c0a3c8654cf 417 ProSitePatterns PS01095 Chitinases family 18 active site. 145 153 - T 28-03-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 AM393_RS21280 6203f5ff52bf4bd465f66c0a3c8654cf 417 SMART SM00636 23 400 5.6E-71 T 28-03-2018 IPR011583 Chitinase II GO:0008061 AM393_RS20285 18b639b1e6fe059767e21b872f95121b 109 SUPERFAMILY SSF69721 3 109 1.44E-41 T 28-03-2018 IPR025526 DsrC-like domain AM393_RS20285 18b639b1e6fe059767e21b872f95121b 109 Gene3D G3DSA:3.30.1420.10 2 39 1.8E-16 T 28-03-2018 AM393_RS20285 18b639b1e6fe059767e21b872f95121b 109 Gene3D G3DSA:1.10.10.370 40 108 1.5E-32 T 28-03-2018 AM393_RS20285 18b639b1e6fe059767e21b872f95121b 109 PIRSF PIRSF006223 2 109 1.6E-46 T 28-03-2018 IPR007453 Sulphur transfer protein DsrC/TusE AM393_RS20285 18b639b1e6fe059767e21b872f95121b 109 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 4 109 4.7E-50 T 28-03-2018 IPR007453 Sulphur transfer protein DsrC/TusE AM393_RS20285 18b639b1e6fe059767e21b872f95121b 109 Pfam PF04358 DsrC like protein 4 109 2.1E-46 T 28-03-2018 IPR007453 Sulphur transfer protein DsrC/TusE AM393_RS11385 90ef30d7ee7ebc0b98b7cba102aea91b 246 Gene3D G3DSA:3.40.50.10090 1 119 1.1E-17 T 28-03-2018 AM393_RS11385 90ef30d7ee7ebc0b98b7cba102aea91b 246 Gene3D G3DSA:3.40.50.10090 121 246 4.5E-21 T 28-03-2018 AM393_RS11385 90ef30d7ee7ebc0b98b7cba102aea91b 246 SUPERFAMILY SSF69618 1 245 1.03E-53 T 28-03-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AM393_RS11385 90ef30d7ee7ebc0b98b7cba102aea91b 246 Pfam PF02602 Uroporphyrinogen-III synthase HemD 14 242 6.6E-39 T 28-03-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AM393_RS22510 edcb46d43205b707fa7f4361ec993e03 459 PIRSF PIRSF006060 1 454 8.0E-74 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AM393_RS22510 edcb46d43205b707fa7f4361ec993e03 459 Pfam PF00324 Amino acid permease 17 447 1.6E-114 T 28-03-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 AM393_RS22510 edcb46d43205b707fa7f4361ec993e03 459 ProSitePatterns PS00218 Amino acid permeases signature. 42 72 - T 28-03-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 AM393_RS24990 49cc60682608714c58f426b3b4650697 538 SUPERFAMILY SSF57997 27 96 9.81E-5 T 28-03-2018 AM393_RS24990 49cc60682608714c58f426b3b4650697 538 Gene3D G3DSA:2.40.170.10 119 538 2.3E-106 T 28-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 AM393_RS24990 49cc60682608714c58f426b3b4650697 538 SUPERFAMILY SSF56935 106 538 6.1E-105 T 28-03-2018 AM393_RS24990 49cc60682608714c58f426b3b4650697 538 Pfam PF11471 Maltoporin periplasmic N-terminal extension 1 53 1.3E-18 T 28-03-2018 IPR021570 LamB-type porin N-terminal domain AM393_RS24990 49cc60682608714c58f426b3b4650697 538 Pfam PF02264 LamB porin 109 538 2.8E-104 T 28-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 AM393_RS24990 49cc60682608714c58f426b3b4650697 538 Gene3D G3DSA:1.20.120.330 21 118 3.0E-5 T 28-03-2018 AM393_RS24990 49cc60682608714c58f426b3b4650697 538 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 113 533 5.0E-114 T 28-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 AM393_RS16880 ad683a95c8b32fb50bb03d810a4c559f 169 SUPERFAMILY SSF52255 9 165 1.57E-65 T 28-03-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 AM393_RS16880 ad683a95c8b32fb50bb03d810a4c559f 169 Pfam PF00731 AIR carboxylase 10 157 3.1E-63 T 28-03-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 AM393_RS16880 ad683a95c8b32fb50bb03d810a4c559f 169 Gene3D G3DSA:3.40.50.7700 1 165 2.4E-65 T 28-03-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 AM393_RS16880 ad683a95c8b32fb50bb03d810a4c559f 169 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 10 163 32.169 T 28-03-2018 IPR033747 Class I PurE AM393_RS16880 ad683a95c8b32fb50bb03d810a4c559f 169 PIRSF PIRSF001338 5 166 8.6E-67 T 28-03-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 AM393_RS16880 ad683a95c8b32fb50bb03d810a4c559f 169 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 10 163 3.7E-65 T 28-03-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 AM393_RS16880 ad683a95c8b32fb50bb03d810a4c559f 169 SMART SM01001 8 159 4.1E-101 T 28-03-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 AM393_RS03740 c6511262b51466e67ea934d8df0c12ad 180 Gene3D G3DSA:3.40.140.10 11 172 6.3E-52 T 28-03-2018 AM393_RS03740 c6511262b51466e67ea934d8df0c12ad 180 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 23 164 48.836 T 28-03-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 AM393_RS03740 c6511262b51466e67ea934d8df0c12ad 180 SUPERFAMILY SSF53927 18 168 9.2E-58 T 28-03-2018 IPR016193 Cytidine deaminase-like GO:0003824 AM393_RS03740 c6511262b51466e67ea934d8df0c12ad 180 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 68 105 - T 28-03-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 AM393_RS03740 c6511262b51466e67ea934d8df0c12ad 180 Pfam PF14437 MafB19-like deaminase 18 164 4.0E-33 T 28-03-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 AM393_RS00100 a4f29e388b8213993d9c5ef939bd38bd 109 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 4 106 2.4E-16 T 28-03-2018 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like AM393_RS00100 a4f29e388b8213993d9c5ef939bd38bd 109 SUPERFAMILY SSF110857 1 106 1.07E-19 T 28-03-2018 IPR013024 Gamma-glutamyl cyclotransferase-like AM393_RS00100 a4f29e388b8213993d9c5ef939bd38bd 109 Gene3D G3DSA:3.10.490.10 1 109 1.4E-19 T 28-03-2018 AM393_RS03280 af31f93cebe91519bc3a2136a4b4d831 338 Pfam PF01515 Phosphate acetyl/butaryl transferase 2 319 1.4E-114 T 28-03-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 AM393_RS03280 af31f93cebe91519bc3a2136a4b4d831 338 Gene3D G3DSA:3.40.50.2300 2 123 0.0011 T 28-03-2018 AM393_RS03280 af31f93cebe91519bc3a2136a4b4d831 338 Gene3D G3DSA:3.40.50.10750 140 296 4.2E-59 T 28-03-2018 AM393_RS03280 af31f93cebe91519bc3a2136a4b4d831 338 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 17 318 1.8E-96 T 28-03-2018 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 AM393_RS03280 af31f93cebe91519bc3a2136a4b4d831 338 PIRSF PIRSF000428 1 327 1.3E-105 T 28-03-2018 IPR012147 Phosphate acetyl/butyryltransferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 AM393_RS03280 af31f93cebe91519bc3a2136a4b4d831 338 SUPERFAMILY SSF53659 2 321 1.32E-77 T 28-03-2018 AM393_RS03785 e913ed3b745541fa6d30ca7cc4c350f3 324 Gene3D G3DSA:2.10.109.10 76 320 8.2E-56 T 28-03-2018 AM393_RS03785 e913ed3b745541fa6d30ca7cc4c350f3 324 SUPERFAMILY SSF51306 78 323 5.58E-83 T 28-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AM393_RS03785 e913ed3b745541fa6d30ca7cc4c350f3 324 ProSitePatterns PS00760 Signal peptidases I lysine active site. 146 158 - T 28-03-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 AM393_RS03785 e913ed3b745541fa6d30ca7cc4c350f3 324 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 144 156 2.9E-25 T 28-03-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AM393_RS03785 e913ed3b745541fa6d30ca7cc4c350f3 324 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 80 96 2.9E-25 T 28-03-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AM393_RS03785 e913ed3b745541fa6d30ca7cc4c350f3 324 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 264 283 2.9E-25 T 28-03-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AM393_RS03785 e913ed3b745541fa6d30ca7cc4c350f3 324 ProSitePatterns PS00501 Signal peptidases I serine active site. 89 96 - T 28-03-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 AM393_RS03785 e913ed3b745541fa6d30ca7cc4c350f3 324 Pfam PF00717 Peptidase S24-like 86 159 1.2E-20 T 28-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AM393_RS03785 e913ed3b745541fa6d30ca7cc4c350f3 324 Pfam PF10502 Signal peptidase, peptidase S26 259 302 5.0E-7 T 28-03-2018 IPR019533 Peptidase S26 AM393_RS03785 e913ed3b745541fa6d30ca7cc4c350f3 324 ProSitePatterns PS00761 Signal peptidases I signature 3. 269 282 - T 28-03-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 AM393_RS03785 e913ed3b745541fa6d30ca7cc4c350f3 324 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 66 159 5.2E-25 T 28-03-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AM393_RS03785 e913ed3b745541fa6d30ca7cc4c350f3 324 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 262 304 1.1E-16 T 28-03-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AM393_RS19975 92fe325717e09e9808299282f4e1a485 427 Gene3D G3DSA:3.65.10.10 21 226 6.9E-65 T 28-03-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 AM393_RS19975 92fe325717e09e9808299282f4e1a485 427 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 10 426 35.761 T 28-03-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 AM393_RS19975 92fe325717e09e9808299282f4e1a485 427 Gene3D G3DSA:3.65.10.10 227 425 4.8E-69 T 28-03-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 AM393_RS19975 92fe325717e09e9808299282f4e1a485 427 SUPERFAMILY SSF55205 1 423 4.84E-146 T 28-03-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 AM393_RS19975 92fe325717e09e9808299282f4e1a485 427 PIRSF PIRSF000505 1 426 4.8E-156 T 28-03-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 AM393_RS19975 92fe325717e09e9808299282f4e1a485 427 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 14 423 8.9E-144 T 28-03-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 AM393_RS19975 92fe325717e09e9808299282f4e1a485 427 ProSitePatterns PS00104 EPSP synthase signature 1. 90 104 - T 28-03-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 AM393_RS19975 92fe325717e09e9808299282f4e1a485 427 ProSitePatterns PS00885 EPSP synthase signature 2. 338 356 - T 28-03-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 AM393_RS19975 92fe325717e09e9808299282f4e1a485 427 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 420 2.6E-156 T 28-03-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 AM393_RS02665 5c4facef10fe0fa61935e6469216e060 180 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 1 163 26.789 T 28-03-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM393_RS02665 5c4facef10fe0fa61935e6469216e060 180 Gene3D G3DSA:3.30.70.20 22 70 9.3E-8 T 28-03-2018 AM393_RS02665 5c4facef10fe0fa61935e6469216e060 180 SUPERFAMILY SSF54862 33 153 1.17E-28 T 28-03-2018 AM393_RS02665 5c4facef10fe0fa61935e6469216e060 180 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 60 71 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM393_RS02665 5c4facef10fe0fa61935e6469216e060 180 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 99 110 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM393_RS02665 5c4facef10fe0fa61935e6469216e060 180 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 16 137 1.5E-50 T 28-03-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM393_RS02665 5c4facef10fe0fa61935e6469216e060 180 Gene3D G3DSA:3.30.70.20 71 103 5.9E-14 T 28-03-2018 AM393_RS02665 5c4facef10fe0fa61935e6469216e060 180 Pfam PF12838 4Fe-4S dicluster domain 59 113 3.7E-11 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM393_RS02665 5c4facef10fe0fa61935e6469216e060 180 Gene3D G3DSA:3.30.70.20 104 171 4.7E-8 T 28-03-2018 AM393_RS09355 79742a0e615b9612d32c53f829e6fae8 426 SUPERFAMILY SSF103473 7 413 1.1E-83 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS09355 79742a0e615b9612d32c53f829e6fae8 426 Gene3D G3DSA:1.20.1250.20 4 207 6.9E-34 T 28-03-2018 AM393_RS09355 79742a0e615b9612d32c53f829e6fae8 426 Gene3D G3DSA:1.20.1250.20 221 419 4.4E-31 T 28-03-2018 AM393_RS09355 79742a0e615b9612d32c53f829e6fae8 426 Pfam PF07690 Major Facilitator Superfamily 269 414 3.0E-13 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS09355 79742a0e615b9612d32c53f829e6fae8 426 Pfam PF07690 Major Facilitator Superfamily 18 257 7.7E-42 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS10795 3b3b416df6f715493a896d29c9a0b835 70 Pfam PF07338 Protein of unknown function (DUF1471) 23 68 1.1E-10 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 AM393_RS10795 3b3b416df6f715493a896d29c9a0b835 70 Gene3D G3DSA:3.30.1660.10 8 70 5.7E-15 T 28-03-2018 IPR025543 Dodecin-like AM393_RS10795 3b3b416df6f715493a896d29c9a0b835 70 SUPERFAMILY SSF159871 2 69 1.83E-13 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 AM393_RS26020 68948feb13f28d6cea3764e2d2595d5a 123 Gene3D G3DSA:3.10.180.10 1 123 1.2E-18 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM393_RS26020 68948feb13f28d6cea3764e2d2595d5a 123 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 116 5.6E-9 T 28-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AM393_RS26020 68948feb13f28d6cea3764e2d2595d5a 123 SUPERFAMILY SSF54593 2 121 7.52E-23 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM393_RS14380 e4e7d87d466ab0789332e2204a4658b7 195 SMART SM00852 7 153 4.3E-22 T 28-03-2018 IPR001453 MoaB/Mog domain AM393_RS14380 e4e7d87d466ab0789332e2204a4658b7 195 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 69 82 - T 28-03-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 AM393_RS14380 e4e7d87d466ab0789332e2204a4658b7 195 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 4 146 4.5E-40 T 28-03-2018 IPR001453 MoaB/Mog domain AM393_RS14380 e4e7d87d466ab0789332e2204a4658b7 195 SUPERFAMILY SSF53218 3 188 3.4E-48 T 28-03-2018 IPR001453 MoaB/Mog domain AM393_RS14380 e4e7d87d466ab0789332e2204a4658b7 195 Gene3D G3DSA:3.40.980.10 1 188 1.3E-39 T 28-03-2018 IPR001453 MoaB/Mog domain AM393_RS14380 e4e7d87d466ab0789332e2204a4658b7 195 Pfam PF00994 Probable molybdopterin binding domain 8 147 8.1E-28 T 28-03-2018 IPR001453 MoaB/Mog domain AM393_RS25415 8f0fddc7d204c189711899d14b5dd771 232 Hamap MF_00478 Electron transport complex subunit RsxE [rsxE]. 1 210 27.473 T 28-03-2018 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 AM393_RS25415 8f0fddc7d204c189711899d14b5dd771 232 Pfam PF02508 Rnf-Nqr subunit, membrane protein 6 199 1.4E-62 T 28-03-2018 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 AM393_RS25415 8f0fddc7d204c189711899d14b5dd771 232 PIRSF PIRSF006102 1 219 4.0E-80 T 28-03-2018 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 AM393_RS25415 8f0fddc7d204c189711899d14b5dd771 232 TIGRFAM TIGR01948 rnfE: electron transport complex, RnfABCDGE type, E subunit 7 208 3.9E-82 T 28-03-2018 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 AM393_RS10325 af6e39038bcd52b5fa2990f1d2bf6eb8 292 Pfam PF05035 2-keto-3-deoxy-galactonokinase 9 286 1.9E-92 T 28-03-2018 IPR007729 2-keto-3-deoxy-galactonokinase GO:0008671|GO:0034194 KEGG: 00052+2.7.1.58|MetaCyc: PWY-7130 AM393_RS28805 81b38af318a7ce2b2f8a595ae26f4172 402 Pfam PF09019 EcoRII C terminal 227 391 2.4E-72 T 28-03-2018 IPR015109 Restriction endonuclease, type II, EcoRII, C-terminal GO:0003677|GO:0009036|GO:0009307 AM393_RS28805 81b38af318a7ce2b2f8a595ae26f4172 402 Pfam PF09217 Restriction endonuclease EcoRII, N-terminal 14 163 4.6E-65 T 28-03-2018 IPR023372 Restriction endonuclease, type II, EcoRII, N-terminal AM393_RS28805 81b38af318a7ce2b2f8a595ae26f4172 402 Gene3D G3DSA:2.40.330.10 1 175 6.5E-38 T 28-03-2018 IPR015300 DNA-binding pseudobarrel domain AM393_RS28805 81b38af318a7ce2b2f8a595ae26f4172 402 SUPERFAMILY SSF101936 3 174 1.33E-61 T 28-03-2018 IPR015300 DNA-binding pseudobarrel domain AM393_RS28805 81b38af318a7ce2b2f8a595ae26f4172 402 SUPERFAMILY SSF52980 178 395 3.65E-83 T 28-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AM393_RS05550 354c67be3c7ccaa764edd06ca0270c49 331 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 63 324 1.0E-46 T 28-03-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain AM393_RS05550 354c67be3c7ccaa764edd06ca0270c49 331 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 28-03-2018 AM393_RS05550 354c67be3c7ccaa764edd06ca0270c49 331 Gene3D G3DSA:3.40.50.2300 54 175 1.7E-18 T 28-03-2018 AM393_RS05550 354c67be3c7ccaa764edd06ca0270c49 331 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 1.7E-16 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM393_RS05550 354c67be3c7ccaa764edd06ca0270c49 331 SMART SM00354 1 73 4.3E-19 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM393_RS05550 354c67be3c7ccaa764edd06ca0270c49 331 SUPERFAMILY SSF47413 1 57 4.31E-15 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM393_RS05550 354c67be3c7ccaa764edd06ca0270c49 331 SUPERFAMILY SSF53822 62 317 7.66E-41 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AM393_RS05550 354c67be3c7ccaa764edd06ca0270c49 331 Gene3D G3DSA:1.10.260.40 3 53 2.6E-17 T 28-03-2018 AM393_RS05550 354c67be3c7ccaa764edd06ca0270c49 331 Gene3D G3DSA:3.40.50.2300 176 312 1.4E-28 T 28-03-2018 AM393_RS04570 494a639a75ea1c699684ee7363187fbc 202 Gene3D G3DSA:3.30.70.20 151 188 0.075 T 28-03-2018 AM393_RS04570 494a639a75ea1c699684ee7363187fbc 202 Gene3D G3DSA:3.30.70.20 1 18 0.054 T 28-03-2018 AM393_RS04570 494a639a75ea1c699684ee7363187fbc 202 Gene3D G3DSA:3.30.70.20 65 91 9.9E-16 T 28-03-2018 AM393_RS04570 494a639a75ea1c699684ee7363187fbc 202 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 82 93 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM393_RS04570 494a639a75ea1c699684ee7363187fbc 202 SUPERFAMILY SSF54862 136 182 1.05E-41 T 28-03-2018 AM393_RS04570 494a639a75ea1c699684ee7363187fbc 202 SUPERFAMILY SSF54862 2 101 1.05E-41 T 28-03-2018 AM393_RS04570 494a639a75ea1c699684ee7363187fbc 202 Gene3D G3DSA:3.30.70.20 19 64 3.7E-9 T 28-03-2018 AM393_RS04570 494a639a75ea1c699684ee7363187fbc 202 Pfam PF13247 4Fe-4S dicluster domain 47 97 8.0E-8 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM393_RS04570 494a639a75ea1c699684ee7363187fbc 202 Gene3D G3DSA:3.30.70.20 92 150 1.9E-9 T 28-03-2018 AM393_RS09715 57b95dec75ca0d21ece3e493d9273fa4 151 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 6 150 34.333 T 28-03-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|Reactome: R-HSA-499943 AM393_RS09715 57b95dec75ca0d21ece3e493d9273fa4 151 Gene3D G3DSA:2.70.40.10 116 150 1.0E-15 T 28-03-2018 AM393_RS09715 57b95dec75ca0d21ece3e493d9273fa4 151 TIGRFAM TIGR00576 dut: dUTP diphosphatase 10 150 8.4E-50 T 28-03-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|Reactome: R-HSA-499943 AM393_RS09715 57b95dec75ca0d21ece3e493d9273fa4 151 SUPERFAMILY SSF51283 1 150 1.44E-54 T 28-03-2018 IPR029054 dUTPase-like AM393_RS09715 57b95dec75ca0d21ece3e493d9273fa4 151 Gene3D G3DSA:2.70.40.10 2 115 2.1E-39 T 28-03-2018 AM393_RS09715 57b95dec75ca0d21ece3e493d9273fa4 151 Pfam PF00692 dUTPase 16 149 1.6E-43 T 28-03-2018 IPR029054 dUTPase-like AM393_RS05135 22fce7d45829d281250254e7565c6152 351 SUPERFAMILY SSF52733 5 342 9.55E-111 T 28-03-2018 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 AM393_RS05135 22fce7d45829d281250254e7565c6152 351 Hamap MF_00230 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [cobT]. 13 348 33.256 T 28-03-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 AM393_RS05135 22fce7d45829d281250254e7565c6152 351 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 15 345 2.3E-116 T 28-03-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 AM393_RS05135 22fce7d45829d281250254e7565c6152 351 Pfam PF02277 Phosphoribosyltransferase 11 343 5.3E-118 T 28-03-2018 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 AM393_RS05135 22fce7d45829d281250254e7565c6152 351 Gene3D G3DSA:3.40.50.10210 73 329 3.8E-94 T 28-03-2018 AM393_RS05135 22fce7d45829d281250254e7565c6152 351 Gene3D G3DSA:1.10.1610.10 5 72 1.6E-29 T 28-03-2018 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 AM393_RS18405 5aa6ba62122708da4e1c979ecf6a1e5e 157 Pfam PF02130 Uncharacterized protein family UPF0054 21 142 2.0E-38 T 28-03-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 AM393_RS18405 5aa6ba62122708da4e1c979ecf6a1e5e 157 Gene3D G3DSA:3.40.390.30 1 155 3.0E-54 T 28-03-2018 IPR023091 Metalloprotease catalytic domain, predicted GO:0004222 AM393_RS18405 5aa6ba62122708da4e1c979ecf6a1e5e 157 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 5 148 24.811 T 28-03-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 AM393_RS18405 5aa6ba62122708da4e1c979ecf6a1e5e 157 SUPERFAMILY SSF55486 3 151 7.57E-50 T 28-03-2018 AM393_RS18405 5aa6ba62122708da4e1c979ecf6a1e5e 157 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 40 144 4.0E-37 T 28-03-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 AM393_RS18405 5aa6ba62122708da4e1c979ecf6a1e5e 157 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 114 124 - T 28-03-2018 IPR020549 Endoribonuclease YbeY, conserved site AM393_RS05020 14c324820f1eb2ae63ddaf9db71aa35a 468 TIGRFAM TIGR03860 FMN_nitrolo: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family 9 436 3.0E-173 T 28-03-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 AM393_RS05020 14c324820f1eb2ae63ddaf9db71aa35a 468 Pfam PF00296 Luciferase-like monooxygenase 35 391 2.2E-53 T 28-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AM393_RS05020 14c324820f1eb2ae63ddaf9db71aa35a 468 Gene3D G3DSA:3.20.20.30 3 460 2.9E-112 T 28-03-2018 AM393_RS05020 14c324820f1eb2ae63ddaf9db71aa35a 468 SUPERFAMILY SSF51679 4 442 2.49E-129 T 28-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AM393_RS05020 14c324820f1eb2ae63ddaf9db71aa35a 468 PIRSF PIRSF000337 4 450 1.2E-147 T 28-03-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 AM393_RS07090 1a9d96b366fe2ba013822831db1e9910 184 Pfam PF03551 Transcriptional regulator PadR-like family 45 101 2.4E-14 T 28-03-2018 IPR005149 Transcription regulator PadR, N-terminal AM393_RS07090 1a9d96b366fe2ba013822831db1e9910 184 SUPERFAMILY SSF46785 41 166 2.99E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS07090 1a9d96b366fe2ba013822831db1e9910 184 Gene3D G3DSA:1.10.10.10 25 159 1.1E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS19160 f0811c38234013def790ae8c8a2b358a 451 Pfam PF00270 DEAD/DEAH box helicase 25 195 1.8E-50 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AM393_RS19160 f0811c38234013def790ae8c8a2b358a 451 SMART SM00490 259 340 2.3E-31 T 28-03-2018 IPR001650 Helicase, C-terminal AM393_RS19160 f0811c38234013def790ae8c8a2b358a 451 Pfam PF00271 Helicase conserved C-terminal domain 234 339 4.9E-26 T 28-03-2018 IPR001650 Helicase, C-terminal AM393_RS19160 f0811c38234013def790ae8c8a2b358a 451 Gene3D G3DSA:3.40.50.300 8 223 4.9E-62 T 28-03-2018 AM393_RS19160 f0811c38234013def790ae8c8a2b358a 451 Hamap MF_00968 ATP-dependent RNA helicase RhlE [rhlE]. 1 448 52.282 T 28-03-2018 IPR028622 ATP-dependent RNA helicase RhlE GO:0004004|GO:0042255 AM393_RS19160 f0811c38234013def790ae8c8a2b358a 451 SUPERFAMILY SSF52540 75 361 8.59E-74 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS19160 f0811c38234013def790ae8c8a2b358a 451 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 28-03-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AM393_RS19160 f0811c38234013def790ae8c8a2b358a 451 Gene3D G3DSA:3.40.50.300 224 449 2.5E-47 T 28-03-2018 AM393_RS19160 f0811c38234013def790ae8c8a2b358a 451 SMART SM00487 20 223 8.8E-64 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AM393_RS24250 0ede7dfa7921ac85227acea696f31005 410 Gene3D G3DSA:1.20.1250.20 197 393 5.7E-22 T 28-03-2018 AM393_RS24250 0ede7dfa7921ac85227acea696f31005 410 Pfam PF07690 Major Facilitator Superfamily 19 349 5.1E-38 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS24250 0ede7dfa7921ac85227acea696f31005 410 ProSitePatterns PS00217 Sugar transport proteins signature 2. 107 132 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM393_RS24250 0ede7dfa7921ac85227acea696f31005 410 Gene3D G3DSA:1.20.1250.20 5 196 5.8E-36 T 28-03-2018 AM393_RS24250 0ede7dfa7921ac85227acea696f31005 410 SUPERFAMILY SSF103473 4 393 9.02E-71 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS06020 1e8f2e950b029b8e9849bf0f1c7252f9 342 Gene3D G3DSA:3.40.50.720 1 164 2.0E-64 T 28-03-2018 AM393_RS06020 1e8f2e950b029b8e9849bf0f1c7252f9 342 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 153 160 - T 28-03-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM393_RS06020 1e8f2e950b029b8e9849bf0f1c7252f9 342 PIRSF PIRSF000149 1 337 7.6E-133 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM393_RS06020 1e8f2e950b029b8e9849bf0f1c7252f9 342 SMART SM00846 3 155 3.6E-79 T 28-03-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM393_RS06020 1e8f2e950b029b8e9849bf0f1c7252f9 342 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 160 316 5.3E-55 T 28-03-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM393_RS06020 1e8f2e950b029b8e9849bf0f1c7252f9 342 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 232 249 3.2E-31 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM393_RS06020 1e8f2e950b029b8e9849bf0f1c7252f9 342 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 176 192 3.2E-31 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM393_RS06020 1e8f2e950b029b8e9849bf0f1c7252f9 342 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 112 125 3.2E-31 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM393_RS06020 1e8f2e950b029b8e9849bf0f1c7252f9 342 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 149 167 3.2E-31 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM393_RS06020 1e8f2e950b029b8e9849bf0f1c7252f9 342 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 272 287 3.2E-31 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM393_RS06020 1e8f2e950b029b8e9849bf0f1c7252f9 342 SUPERFAMILY SSF55347 155 317 5.66E-58 T 28-03-2018 AM393_RS06020 1e8f2e950b029b8e9849bf0f1c7252f9 342 Hamap MF_01640 D-erythrose-4-phosphate dehydrogenase [epd]. 2 337 66.001 T 28-03-2018 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72 AM393_RS06020 1e8f2e950b029b8e9849bf0f1c7252f9 342 SUPERFAMILY SSF51735 1 179 1.84E-54 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS06020 1e8f2e950b029b8e9849bf0f1c7252f9 342 TIGRFAM TIGR01532 E4PD_g-proteo: erythrose-4-phosphate dehydrogenase 4 328 3.0E-194 T 28-03-2018 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72 AM393_RS06020 1e8f2e950b029b8e9849bf0f1c7252f9 342 Gene3D G3DSA:3.30.360.10 165 318 7.3E-53 T 28-03-2018 AM393_RS06020 1e8f2e950b029b8e9849bf0f1c7252f9 342 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 104 6.2E-33 T 28-03-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM393_RS01920 f9cf5ef430735db4d73fcb22e7adc1b6 220 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 130 146 1.8E-10 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM393_RS01920 f9cf5ef430735db4d73fcb22e7adc1b6 220 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 175 188 1.8E-10 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM393_RS01920 f9cf5ef430735db4d73fcb22e7adc1b6 220 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 148 168 1.8E-10 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM393_RS01920 f9cf5ef430735db4d73fcb22e7adc1b6 220 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 1.8E-10 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM393_RS01920 f9cf5ef430735db4d73fcb22e7adc1b6 220 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 99 112 1.8E-10 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM393_RS01920 f9cf5ef430735db4d73fcb22e7adc1b6 220 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 79 186 1.9E-13 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM393_RS01920 f9cf5ef430735db4d73fcb22e7adc1b6 220 Gene3D G3DSA:3.40.50.1000 75 218 5.4E-30 T 28-03-2018 IPR023214 HAD-like domain AM393_RS01920 f9cf5ef430735db4d73fcb22e7adc1b6 220 Gene3D G3DSA:1.10.150.240 29 74 1.3E-12 T 28-03-2018 IPR023198 Phosphoglycolate phosphatase, domain 2 AM393_RS01920 f9cf5ef430735db4d73fcb22e7adc1b6 220 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 185 4.1E-31 T 28-03-2018 IPR023214 HAD-like domain AM393_RS01920 f9cf5ef430735db4d73fcb22e7adc1b6 220 Gene3D G3DSA:3.40.50.1000 1 28 0.35 T 28-03-2018 IPR023214 HAD-like domain AM393_RS01920 f9cf5ef430735db4d73fcb22e7adc1b6 220 SUPERFAMILY SSF56784 1 211 3.8E-49 T 28-03-2018 IPR023214 HAD-like domain AM393_RS04075 fa4d7b1b9650eaff659ef5ae015e7580 391 SUPERFAMILY SSF111369 57 302 9.02E-74 T 28-03-2018 AM393_RS04075 fa4d7b1b9650eaff659ef5ae015e7580 391 Gene3D G3DSA:2.40.50.100 166 362 9.7E-6 T 28-03-2018 AM393_RS04075 fa4d7b1b9650eaff659ef5ae015e7580 391 Pfam PF13437 HlyD family secretion protein 177 294 2.6E-5 T 28-03-2018 AM393_RS04075 fa4d7b1b9650eaff659ef5ae015e7580 391 Gene3D G3DSA:2.40.50.100 66 138 7.0E-22 T 28-03-2018 AM393_RS04075 fa4d7b1b9650eaff659ef5ae015e7580 391 Pfam PF13533 Biotin-lipoyl like 66 115 7.9E-18 T 28-03-2018 AM393_RS04075 fa4d7b1b9650eaff659ef5ae015e7580 391 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 42 378 4.5E-83 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AM393_RS02590 bfbcc61a2dd1abb1190ba9954d3b86cd 313 Gene3D G3DSA:1.10.10.60 252 310 1.5E-6 T 28-03-2018 AM393_RS02590 bfbcc61a2dd1abb1190ba9954d3b86cd 313 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 8 308 6.8E-54 T 28-03-2018 IPR010106 Recombination-promoting nuclease RpnA AM393_RS02590 bfbcc61a2dd1abb1190ba9954d3b86cd 313 Pfam PF04754 Putative transposase, YhgA-like 7 208 6.0E-89 T 28-03-2018 IPR006842 Transposase (putative), YhgA-like AM393_RS22575 2d126f232ffd9ce9d7c0a92ac19d2b5b 1175 SUPERFAMILY SSF52922 255 411 1.17E-42 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AM393_RS22575 2d126f232ffd9ce9d7c0a92ac19d2b5b 1175 SUPERFAMILY SSF53323 419 668 2.88E-75 T 28-03-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 AM393_RS22575 2d126f232ffd9ce9d7c0a92ac19d2b5b 1175 PIRSF PIRSF000159 1 1174 0.0 T 28-03-2018 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 AM393_RS22575 2d126f232ffd9ce9d7c0a92ac19d2b5b 1175 Gene3D G3DSA:3.40.50.970 793 1168 9.4E-107 T 28-03-2018 AM393_RS22575 2d126f232ffd9ce9d7c0a92ac19d2b5b 1175 SUPERFAMILY SSF52518 2 254 4.12E-74 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold AM393_RS22575 2d126f232ffd9ce9d7c0a92ac19d2b5b 1175 Gene3D G3DSA:3.40.50.920 255 417 1.1E-41 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AM393_RS22575 2d126f232ffd9ce9d7c0a92ac19d2b5b 1175 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 936 1066 2.2E-9 T 28-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AM393_RS22575 2d126f232ffd9ce9d7c0a92ac19d2b5b 1175 SUPERFAMILY SSF54862 665 838 3.89E-22 T 28-03-2018 AM393_RS22575 2d126f232ffd9ce9d7c0a92ac19d2b5b 1175 SMART SM00890 622 679 2.1E-30 T 28-03-2018 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 AM393_RS22575 2d126f232ffd9ce9d7c0a92ac19d2b5b 1175 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 745 756 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM393_RS22575 2d126f232ffd9ce9d7c0a92ac19d2b5b 1175 Gene3D G3DSA:3.30.70.20 669 791 9.5E-29 T 28-03-2018 AM393_RS22575 2d126f232ffd9ce9d7c0a92ac19d2b5b 1175 SUPERFAMILY SSF52518 794 1166 3.27E-119 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold AM393_RS22575 2d126f232ffd9ce9d7c0a92ac19d2b5b 1175 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 13 243 3.5E-82 T 28-03-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 AM393_RS22575 2d126f232ffd9ce9d7c0a92ac19d2b5b 1175 TIGRFAM TIGR02176 pyruv_ox_red: pyruvate:ferredoxin (flavodoxin) oxidoreductase 1 1165 0.0 T 28-03-2018 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 AM393_RS22575 2d126f232ffd9ce9d7c0a92ac19d2b5b 1175 Gene3D G3DSA:3.40.920.10 418 624 1.5E-53 T 28-03-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 AM393_RS22575 2d126f232ffd9ce9d7c0a92ac19d2b5b 1175 Pfam PF10371 Domain of unknown function 626 678 7.2E-23 T 28-03-2018 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 AM393_RS22575 2d126f232ffd9ce9d7c0a92ac19d2b5b 1175 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 426 610 1.3E-33 T 28-03-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 AM393_RS22575 2d126f232ffd9ce9d7c0a92ac19d2b5b 1175 Gene3D G3DSA:3.40.50.970 1 254 4.9E-50 T 28-03-2018 AM393_RS22575 2d126f232ffd9ce9d7c0a92ac19d2b5b 1175 Pfam PF13484 4Fe-4S double cluster binding domain 689 757 7.5E-10 T 28-03-2018 AM393_RS22575 2d126f232ffd9ce9d7c0a92ac19d2b5b 1175 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 265 347 1.7E-15 T 28-03-2018 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II AM393_RS22575 2d126f232ffd9ce9d7c0a92ac19d2b5b 1175 Gene3D G3DSA:4.10.780.10 634 668 2.2E-15 T 28-03-2018 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 AM393_RS21940 4d553dd9116cf04dac351427a0664ad1 400 Gene3D G3DSA:1.20.1250.20 2 199 1.2E-25 T 28-03-2018 AM393_RS21940 4d553dd9116cf04dac351427a0664ad1 400 Pfam PF07690 Major Facilitator Superfamily 18 331 1.9E-27 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS21940 4d553dd9116cf04dac351427a0664ad1 400 Gene3D G3DSA:1.20.1250.20 200 386 9.5E-17 T 28-03-2018 AM393_RS21940 4d553dd9116cf04dac351427a0664ad1 400 SUPERFAMILY SSF103473 7 388 8.89E-53 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS16755 d0f42d83bcfb45ee368d79a9a1d42ffa 201 SUPERFAMILY SSF111304 2 199 4.58E-73 T 28-03-2018 IPR023627 Recombination protein RecR AM393_RS16755 d0f42d83bcfb45ee368d79a9a1d42ffa 201 Hamap MF_00017 Recombination protein RecR [recR]. 1 199 104.89 T 28-03-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 AM393_RS16755 d0f42d83bcfb45ee368d79a9a1d42ffa 201 Pfam PF13662 Toprim domain 82 172 4.1E-24 T 28-03-2018 IPR006171 TOPRIM domain AM393_RS16755 d0f42d83bcfb45ee368d79a9a1d42ffa 201 Pfam PF02132 RecR protein 41 77 2.1E-15 T 28-03-2018 IPR023628 Recombination protein RecR, C4-type zinc finger AM393_RS16755 d0f42d83bcfb45ee368d79a9a1d42ffa 201 TIGRFAM TIGR00615 recR: recombination protein RecR 2 197 1.1E-84 T 28-03-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 AM393_RS16755 d0f42d83bcfb45ee368d79a9a1d42ffa 201 SMART SM00493 81 166 8.5E-20 T 28-03-2018 IPR006171 TOPRIM domain AM393_RS16755 d0f42d83bcfb45ee368d79a9a1d42ffa 201 Gene3D G3DSA:1.10.150.20 6 32 0.46 T 28-03-2018 AM393_RS16755 d0f42d83bcfb45ee368d79a9a1d42ffa 201 Gene3D G3DSA:3.40.1360.10 78 171 2.9E-36 T 28-03-2018 AM393_RS16755 d0f42d83bcfb45ee368d79a9a1d42ffa 201 ProSitePatterns PS01300 RecR protein signature. 57 78 - T 28-03-2018 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 AM393_RS14520 16cbd67114adfdd0cb869ff9e0e5d525 97 PIRSF PIRSF002736 1 97 6.8E-41 T 28-03-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 AM393_RS14520 16cbd67114adfdd0cb869ff9e0e5d525 97 ProDom PD015389 LYASE CITRATE ACYL CARRIER GAMMA CHAIN CITD PRECURSOR SIGNAL DIRECT 10 73 7.0E-30 T 28-03-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 AM393_RS14520 16cbd67114adfdd0cb869ff9e0e5d525 97 Pfam PF06857 Malonate decarboxylase delta subunit (MdcD) 6 86 3.0E-29 T 28-03-2018 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein AM393_RS14520 16cbd67114adfdd0cb869ff9e0e5d525 97 TIGRFAM TIGR01608 citD: citrate lyase acyl carrier protein 1 94 1.7E-46 T 28-03-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 AM393_RS14520 16cbd67114adfdd0cb869ff9e0e5d525 97 Hamap MF_00805 Citrate lyase acyl carrier protein [citD]. 1 97 26.853 T 28-03-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 AM393_RS26655 b827a77f4af1cd2ccdcd56705d2124a0 337 SMART SM00448 8 120 1.9E-30 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM393_RS26655 b827a77f4af1cd2ccdcd56705d2124a0 337 Gene3D G3DSA:3.40.50.2300 3 294 3.0E-35 T 28-03-2018 AM393_RS26655 b827a77f4af1cd2ccdcd56705d2124a0 337 SUPERFAMILY SSF52172 7 130 2.13E-34 T 28-03-2018 IPR011006 CheY-like superfamily AM393_RS26655 b827a77f4af1cd2ccdcd56705d2124a0 337 Hamap MF_00958 Regulator of RpoS [rssB]. 1 337 54.135 T 28-03-2018 IPR028616 Regulator of RpoS AM393_RS26655 b827a77f4af1cd2ccdcd56705d2124a0 337 Pfam PF00072 Response regulator receiver domain 10 120 1.5E-29 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM393_RS01460 4d7054a5cb6f23440550aa8aeceef083 310 Pfam PF07670 Nucleoside recognition 19 99 9.1E-6 T 28-03-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 AM393_RS01460 4d7054a5cb6f23440550aa8aeceef083 310 Pfam PF07670 Nucleoside recognition 183 250 1.0E-5 T 28-03-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 AM393_RS23180 4c2cb5ce10657b538580762e58d72cfd 245 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 52 57 - T 28-03-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 AM393_RS23180 4c2cb5ce10657b538580762e58d72cfd 245 SUPERFAMILY SSF50494 3 239 2.82E-25 T 28-03-2018 IPR009003 Peptidase S1, PA clan AM393_RS23180 4c2cb5ce10657b538580762e58d72cfd 245 Gene3D G3DSA:2.40.10.10 18 50 1.9E-6 T 28-03-2018 AM393_RS23180 4c2cb5ce10657b538580762e58d72cfd 245 PRINTS PR00839 V8 serine protease family signature 41 58 5.5E-16 T 28-03-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 AM393_RS23180 4c2cb5ce10657b538580762e58d72cfd 245 PRINTS PR00839 V8 serine protease family signature 204 216 5.5E-16 T 28-03-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 AM393_RS23180 4c2cb5ce10657b538580762e58d72cfd 245 PRINTS PR00839 V8 serine protease family signature 150 163 5.5E-16 T 28-03-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 AM393_RS23180 4c2cb5ce10657b538580762e58d72cfd 245 PRINTS PR00839 V8 serine protease family signature 184 200 5.5E-16 T 28-03-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 AM393_RS23180 4c2cb5ce10657b538580762e58d72cfd 245 PRINTS PR00839 V8 serine protease family signature 16 33 5.5E-16 T 28-03-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 AM393_RS23180 4c2cb5ce10657b538580762e58d72cfd 245 Pfam PF00089 Trypsin 21 216 2.0E-7 T 28-03-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 AM393_RS23180 4c2cb5ce10657b538580762e58d72cfd 245 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 189 200 - T 28-03-2018 IPR033116 Serine proteases, trypsin family, serine active site AM393_RS23180 4c2cb5ce10657b538580762e58d72cfd 245 Gene3D G3DSA:2.40.10.10 173 243 2.9E-9 T 28-03-2018 AM393_RS23180 4c2cb5ce10657b538580762e58d72cfd 245 Gene3D G3DSA:2.40.10.10 51 172 1.8E-5 T 28-03-2018 AM393_RS08590 2a679474277426ffe89131bc82b937d4 186 SUPERFAMILY SSF55811 3 181 1.33E-37 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 AM393_RS08590 2a679474277426ffe89131bc82b937d4 186 ProSitePatterns PS00893 Nudix box signature. 80 101 - T 28-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AM393_RS08590 2a679474277426ffe89131bc82b937d4 186 Pfam PF00293 NUDIX domain 47 155 1.6E-13 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AM393_RS08590 2a679474277426ffe89131bc82b937d4 186 Gene3D G3DSA:3.90.79.10 8 186 1.4E-33 T 28-03-2018 AM393_RS26355 ece2cba145d59a4a01b1b7141c5f37ef 303 Gene3D G3DSA:3.40.190.10 98 183 4.0E-18 T 28-03-2018 AM393_RS26355 ece2cba145d59a4a01b1b7141c5f37ef 303 Pfam PF03466 LysR substrate binding domain 94 293 8.1E-30 T 28-03-2018 IPR005119 LysR, substrate-binding AM393_RS26355 ece2cba145d59a4a01b1b7141c5f37ef 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 7.2E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS26355 ece2cba145d59a4a01b1b7141c5f37ef 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 7.2E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS26355 ece2cba145d59a4a01b1b7141c5f37ef 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 7.2E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS26355 ece2cba145d59a4a01b1b7141c5f37ef 303 Gene3D G3DSA:3.40.190.10 184 257 5.2E-8 T 28-03-2018 AM393_RS26355 ece2cba145d59a4a01b1b7141c5f37ef 303 SUPERFAMILY SSF46785 5 118 5.17E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS26355 ece2cba145d59a4a01b1b7141c5f37ef 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 65 2.2E-15 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS26355 ece2cba145d59a4a01b1b7141c5f37ef 303 Gene3D G3DSA:1.10.10.10 2 93 7.5E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS26355 ece2cba145d59a4a01b1b7141c5f37ef 303 SUPERFAMILY SSF53850 95 296 3.44E-35 T 28-03-2018 AM393_RS03485 b1e273b4ff8d3c6e4a6cd3ac5fee14e9 392 Gene3D G3DSA:3.20.20.70 5 313 7.5E-34 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM393_RS03485 b1e273b4ff8d3c6e4a6cd3ac5fee14e9 392 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 143 381 1.0E-21 T 28-03-2018 AM393_RS03485 b1e273b4ff8d3c6e4a6cd3ac5fee14e9 392 ProSitePatterns PS00028 Zinc finger C2H2 type domain signature. 309 330 - T 28-03-2018 IPR013087 Zinc finger C2H2-type GO:0003676 AM393_RS03485 b1e273b4ff8d3c6e4a6cd3ac5fee14e9 392 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 253 339 9.9E-19 T 28-03-2018 IPR023885 4Fe4S-binding SPASM domain AM393_RS03485 b1e273b4ff8d3c6e4a6cd3ac5fee14e9 392 SUPERFAMILY SSF102114 14 322 1.29E-38 T 28-03-2018 AM393_RS03485 b1e273b4ff8d3c6e4a6cd3ac5fee14e9 392 Pfam PF13186 Iron-sulfur cluster-binding domain 253 313 1.6E-7 T 28-03-2018 IPR023885 4Fe4S-binding SPASM domain AM393_RS03485 b1e273b4ff8d3c6e4a6cd3ac5fee14e9 392 TIGRFAM TIGR03942 sulfatase_rSAM: anaerobic sulfatase maturase 7 358 9.8E-141 T 28-03-2018 IPR023867 Anaerobic sulphatase maturase, radical SAM GO:0016491 AM393_RS03485 b1e273b4ff8d3c6e4a6cd3ac5fee14e9 392 Pfam PF04055 Radical SAM superfamily 14 165 3.2E-11 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AM393_RS25970 be4796ccd474481ffb168edabe1a0561 184 SUPERFAMILY SSF52833 46 178 3.31E-38 T 28-03-2018 IPR012336 Thioredoxin-like fold AM393_RS25970 be4796ccd474481ffb168edabe1a0561 184 ProSitePatterns PS00194 Thioredoxin family active site. 72 90 - T 28-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AM393_RS25970 be4796ccd474481ffb168edabe1a0561 184 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 6 177 2.2E-75 T 28-03-2018 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 AM393_RS25970 be4796ccd474481ffb168edabe1a0561 184 Gene3D G3DSA:3.40.30.10 23 181 2.3E-27 T 28-03-2018 AM393_RS25970 be4796ccd474481ffb168edabe1a0561 184 Pfam PF08534 Redoxin 42 165 7.8E-24 T 28-03-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 AM393_RS10395 5960c5d62ade2dfaddfa2d77ae634ef7 454 SUPERFAMILY SSF116878 379 454 1.96E-51 T 28-03-2018 AM393_RS10395 5960c5d62ade2dfaddfa2d77ae634ef7 454 SUPERFAMILY SSF116878 121 220 1.96E-51 T 28-03-2018 AM393_RS10395 5960c5d62ade2dfaddfa2d77ae634ef7 454 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 216 370 1.4E-22 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AM393_RS10395 5960c5d62ade2dfaddfa2d77ae634ef7 454 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 5 454 33.062 T 28-03-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 AM393_RS10395 5960c5d62ade2dfaddfa2d77ae634ef7 454 Gene3D G3DSA:1.20.120.430 122 281 4.4E-28 T 28-03-2018 AM393_RS10395 5960c5d62ade2dfaddfa2d77ae634ef7 454 SUPERFAMILY SSF52540 72 152 4.25E-45 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS10395 5960c5d62ade2dfaddfa2d77ae634ef7 454 SUPERFAMILY SSF52540 188 372 4.25E-45 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS10395 5960c5d62ade2dfaddfa2d77ae634ef7 454 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 11 454 2.8E-98 T 28-03-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 AM393_RS10395 5960c5d62ade2dfaddfa2d77ae634ef7 454 Gene3D G3DSA:3.30.1360.120 1 121 3.0E-40 T 28-03-2018 AM393_RS10395 5960c5d62ade2dfaddfa2d77ae634ef7 454 Pfam PF10396 GTP-binding protein TrmE N-terminus 6 120 9.1E-34 T 28-03-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 AM393_RS10395 5960c5d62ade2dfaddfa2d77ae634ef7 454 Pfam PF12631 MnmE helical domain 123 451 4.0E-61 T 28-03-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 AM393_RS10395 5960c5d62ade2dfaddfa2d77ae634ef7 454 Pfam PF01926 50S ribosome-binding GTPase 218 336 2.3E-24 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 AM393_RS10395 5960c5d62ade2dfaddfa2d77ae634ef7 454 Gene3D G3DSA:1.20.120.430 282 454 7.6E-34 T 28-03-2018 AM393_RS20335 81ef6fa378c89be04f843aaf4c065ac8 535 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 13 499 1.3E-114 T 28-03-2018 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 AM393_RS20335 81ef6fa378c89be04f843aaf4c065ac8 535 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 56 499 1.4E-157 T 28-03-2018 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 AM393_RS20335 81ef6fa378c89be04f843aaf4c065ac8 535 ProSitePatterns PS01303 BCCT family of transporters signature. 312 321 - T 28-03-2018 IPR018093 BCCT transporter, conserved site GO:0005215|GO:0006810|GO:0016020 AM393_RS05185 7ddeccb414b9912011cb896a2d6021e8 241 SUPERFAMILY SSF53790 1 239 3.4E-57 T 28-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AM393_RS05185 7ddeccb414b9912011cb896a2d6021e8 241 Gene3D G3DSA:3.30.950.10 121 238 1.1E-51 T 28-03-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AM393_RS05185 7ddeccb414b9912011cb896a2d6021e8 241 TIGRFAM TIGR01466 cobJ_cbiH: precorrin-3B C17-methyltransferase 2 240 2.3E-105 T 28-03-2018 IPR006363 Precorrin-3B C17-methyltransferase domain GO:0008168|GO:0009236 AM393_RS05185 7ddeccb414b9912011cb896a2d6021e8 241 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 1 208 5.5E-39 T 28-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AM393_RS05185 7ddeccb414b9912011cb896a2d6021e8 241 Gene3D G3DSA:3.40.1010.10 1 120 5.9E-34 T 28-03-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AM393_RS14060 d39da5696ee6c8f1a4463e0a36f25197 343 SUPERFAMILY SSF53697 26 343 4.61E-48 T 28-03-2018 AM393_RS14060 d39da5696ee6c8f1a4463e0a36f25197 343 Pfam PF01380 SIS domain 65 139 3.5E-11 T 28-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AM393_RS14060 d39da5696ee6c8f1a4463e0a36f25197 343 PIRSF PIRSF009290 8 343 6.3E-92 T 28-03-2018 IPR024713 Fructosamine deglycase FrlB AM393_RS14060 d39da5696ee6c8f1a4463e0a36f25197 343 Gene3D G3DSA:3.40.50.10490 9 169 1.7E-26 T 28-03-2018 AM393_RS14060 d39da5696ee6c8f1a4463e0a36f25197 343 Gene3D G3DSA:3.40.50.10490 171 331 4.8E-9 T 28-03-2018 AM393_RS11110 dbec05b7a016c99bbfcac5cd1cfcf02f 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 342 363 2.2E-49 T 28-03-2018 AM393_RS11110 dbec05b7a016c99bbfcac5cd1cfcf02f 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 2.2E-49 T 28-03-2018 AM393_RS11110 dbec05b7a016c99bbfcac5cd1cfcf02f 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 2.2E-49 T 28-03-2018 AM393_RS11110 dbec05b7a016c99bbfcac5cd1cfcf02f 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 306 313 2.2E-49 T 28-03-2018 AM393_RS11110 dbec05b7a016c99bbfcac5cd1cfcf02f 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 407 422 2.2E-49 T 28-03-2018 AM393_RS11110 dbec05b7a016c99bbfcac5cd1cfcf02f 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 142 151 2.2E-49 T 28-03-2018 AM393_RS11110 dbec05b7a016c99bbfcac5cd1cfcf02f 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 178 203 2.2E-49 T 28-03-2018 AM393_RS11110 dbec05b7a016c99bbfcac5cd1cfcf02f 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 263 277 2.2E-49 T 28-03-2018 AM393_RS11110 dbec05b7a016c99bbfcac5cd1cfcf02f 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 432 452 2.2E-49 T 28-03-2018 AM393_RS11110 dbec05b7a016c99bbfcac5cd1cfcf02f 466 SUPERFAMILY SSF51905 1 322 2.52E-54 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS11110 dbec05b7a016c99bbfcac5cd1cfcf02f 466 Hamap MF_00247 Soluble pyridine nucleotide transhydrogenase [sthA]. 2 466 69.497 T 28-03-2018 IPR022962 Soluble pyridine nucleotide transhydrogenase GO:0003957|GO:0055114 KEGG: 00760+1.6.1.1|MetaCyc: PWY-5083 AM393_RS11110 dbec05b7a016c99bbfcac5cd1cfcf02f 466 PIRSF PIRSF000350 1 463 6.3E-70 T 28-03-2018 AM393_RS11110 dbec05b7a016c99bbfcac5cd1cfcf02f 466 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 326 9.9E-59 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS11110 dbec05b7a016c99bbfcac5cd1cfcf02f 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 1.4E-25 T 28-03-2018 AM393_RS11110 dbec05b7a016c99bbfcac5cd1cfcf02f 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 139 157 1.4E-25 T 28-03-2018 AM393_RS11110 dbec05b7a016c99bbfcac5cd1cfcf02f 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 178 196 1.4E-25 T 28-03-2018 AM393_RS11110 dbec05b7a016c99bbfcac5cd1cfcf02f 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 278 1.4E-25 T 28-03-2018 AM393_RS11110 dbec05b7a016c99bbfcac5cd1cfcf02f 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 291 313 1.4E-25 T 28-03-2018 AM393_RS11110 dbec05b7a016c99bbfcac5cd1cfcf02f 466 Gene3D G3DSA:3.40.50.720 164 336 2.1E-29 T 28-03-2018 AM393_RS11110 dbec05b7a016c99bbfcac5cd1cfcf02f 466 Gene3D G3DSA:3.30.390.30 337 463 8.1E-34 T 28-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 AM393_RS11110 dbec05b7a016c99bbfcac5cd1cfcf02f 466 Gene3D G3DSA:3.50.50.60 4 163 3.9E-21 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS11110 dbec05b7a016c99bbfcac5cd1cfcf02f 466 SUPERFAMILY SSF55424 345 463 1.51E-30 T 28-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 AM393_RS11110 dbec05b7a016c99bbfcac5cd1cfcf02f 466 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 346 457 4.4E-30 T 28-03-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AM393_RS26290 dd67f2e213f9c4361d1038f5ec230d33 406 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 7 405 1.1E-180 T 28-03-2018 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 AM393_RS26290 dd67f2e213f9c4361d1038f5ec230d33 406 SUPERFAMILY SSF53383 4 403 6.05E-130 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM393_RS26290 dd67f2e213f9c4361d1038f5ec230d33 406 Pfam PF00266 Aminotransferase class-V 25 394 1.1E-152 T 28-03-2018 IPR000192 Aminotransferase class V domain AM393_RS26290 dd67f2e213f9c4361d1038f5ec230d33 406 Gene3D G3DSA:3.90.1150.10 284 401 1.2E-38 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM393_RS26290 dd67f2e213f9c4361d1038f5ec230d33 406 Gene3D G3DSA:3.40.640.10 34 283 1.5E-59 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM393_RS26290 dd67f2e213f9c4361d1038f5ec230d33 406 Hamap MF_01831 Cysteine desulfurase [sufS]. 1 406 72.287 T 28-03-2018 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 AM393_RS26290 dd67f2e213f9c4361d1038f5ec230d33 406 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 217 236 - T 28-03-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site AM393_RS21630 e95ae8d6a95f52f977f1c7f53ee131b4 452 SUPERFAMILY SSF51366 257 450 7.85E-58 T 28-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AM393_RS21630 e95ae8d6a95f52f977f1c7f53ee131b4 452 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 3 254 35.197 T 28-03-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 AM393_RS21630 e95ae8d6a95f52f977f1c7f53ee131b4 452 SUPERFAMILY SSF51366 1 251 7.18E-84 T 28-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AM393_RS21630 e95ae8d6a95f52f977f1c7f53ee131b4 452 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 255 452 30.922 T 28-03-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 AM393_RS21630 e95ae8d6a95f52f977f1c7f53ee131b4 452 Gene3D G3DSA:3.20.20.70 1 259 5.5E-61 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM393_RS21630 e95ae8d6a95f52f977f1c7f53ee131b4 452 Gene3D G3DSA:3.20.20.70 260 452 3.9E-60 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM393_RS21630 e95ae8d6a95f52f977f1c7f53ee131b4 452 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 50 68 - T 28-03-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 AM393_RS21630 e95ae8d6a95f52f977f1c7f53ee131b4 452 Pfam PF00218 Indole-3-glycerol phosphate synthase 5 251 1.0E-97 T 28-03-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 AM393_RS21630 e95ae8d6a95f52f977f1c7f53ee131b4 452 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 257 447 6.4E-61 T 28-03-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 AM393_RS19945 3de71a36803e1768961049c5927fee4b 246 ProSitePatterns PS01087 Radical activating enzymes signature. 18 39 - T 28-03-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 AM393_RS19945 3de71a36803e1768961049c5927fee4b 246 TIGRFAM TIGR02493 PFLA: pyruvate formate-lyase 1-activating enzyme 6 239 7.7E-108 T 28-03-2018 IPR012838 Pyruvate formate-lyase activating enzyme GO:0043365|GO:0055114 AM393_RS19945 3de71a36803e1768961049c5927fee4b 246 Pfam PF13353 4Fe-4S single cluster domain 16 141 2.3E-18 T 28-03-2018 AM393_RS19945 3de71a36803e1768961049c5927fee4b 246 Pfam PF04055 Radical SAM superfamily 24 178 3.4E-32 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AM393_RS19945 3de71a36803e1768961049c5927fee4b 246 SUPERFAMILY SSF102114 23 216 5.1E-25 T 28-03-2018 AM393_RS19945 3de71a36803e1768961049c5927fee4b 246 Gene3D G3DSA:3.80.30.10 68 246 1.1E-40 T 28-03-2018 AM393_RS19945 3de71a36803e1768961049c5927fee4b 246 PIRSF PIRSF000371 44 246 1.1E-47 T 28-03-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 AM393_RS19945 3de71a36803e1768961049c5927fee4b 246 PIRSF PIRSF000371 1 47 3.8E-10 T 28-03-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 AM393_RS10170 5d70aa2baca7b60ef115f36c90778b38 107 Pfam PF01381 Helix-turn-helix 52 96 2.5E-8 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM393_RS10170 5d70aa2baca7b60ef115f36c90778b38 107 Gene3D G3DSA:1.10.260.40 46 101 1.9E-10 T 28-03-2018 AM393_RS10170 5d70aa2baca7b60ef115f36c90778b38 107 SMART SM00530 51 105 0.0026 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM393_RS10170 5d70aa2baca7b60ef115f36c90778b38 107 SUPERFAMILY SSF47413 52 106 2.56E-11 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM393_RS11900 17d011c59199f3a19b62a450a537c143 543 TIGRFAM TIGR01013 2a58: sodium-dependent inorganic phosphate (Pi) transporter 67 520 1.2E-153 T 28-03-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 AM393_RS11900 17d011c59199f3a19b62a450a537c143 543 Gene3D G3DSA:1.20.58.220 323 432 3.3E-8 T 28-03-2018 AM393_RS11900 17d011c59199f3a19b62a450a537c143 543 TIGRFAM TIGR00704 NaPi_cotrn_rel: Na/Pi-cotransporter II-related protein 1 308 1.2E-125 T 28-03-2018 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein GO:0016020 AM393_RS11900 17d011c59199f3a19b62a450a537c143 543 Gene3D G3DSA:1.20.58.220 433 543 1.3E-8 T 28-03-2018 AM393_RS11900 17d011c59199f3a19b62a450a537c143 543 SUPERFAMILY SSF109755 320 531 1.57E-23 T 28-03-2018 AM393_RS11900 17d011c59199f3a19b62a450a537c143 543 Pfam PF02690 Na+/Pi-cotransporter 13 147 2.5E-33 T 28-03-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 AM393_RS11900 17d011c59199f3a19b62a450a537c143 543 Pfam PF02690 Na+/Pi-cotransporter 158 247 1.5E-7 T 28-03-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 AM393_RS10610 f550ca938e0860f9a03c7713d352088c 465 PRINTS PR01036 Tetracycline resistance protein TetB signature 15 39 1.9E-8 T 28-03-2018 AM393_RS10610 f550ca938e0860f9a03c7713d352088c 465 PRINTS PR01036 Tetracycline resistance protein TetB signature 136 160 1.9E-8 T 28-03-2018 AM393_RS10610 f550ca938e0860f9a03c7713d352088c 465 PRINTS PR01036 Tetracycline resistance protein TetB signature 397 416 1.9E-8 T 28-03-2018 AM393_RS10610 f550ca938e0860f9a03c7713d352088c 465 PRINTS PR01036 Tetracycline resistance protein TetB signature 106 126 1.9E-8 T 28-03-2018 AM393_RS10610 f550ca938e0860f9a03c7713d352088c 465 PRINTS PR01036 Tetracycline resistance protein TetB signature 200 218 1.9E-8 T 28-03-2018 AM393_RS10610 f550ca938e0860f9a03c7713d352088c 465 Gene3D G3DSA:1.20.1250.20 12 197 1.1E-27 T 28-03-2018 AM393_RS10610 f550ca938e0860f9a03c7713d352088c 465 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 18 427 1.0E-76 T 28-03-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 AM393_RS10610 f550ca938e0860f9a03c7713d352088c 465 Pfam PF07690 Major Facilitator Superfamily 17 406 8.6E-46 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS10610 f550ca938e0860f9a03c7713d352088c 465 SUPERFAMILY SSF103473 14 195 9.68E-58 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS10610 f550ca938e0860f9a03c7713d352088c 465 SUPERFAMILY SSF103473 245 451 9.68E-58 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS10610 f550ca938e0860f9a03c7713d352088c 465 Gene3D G3DSA:1.20.1250.20 256 463 6.0E-20 T 28-03-2018 AM393_RS18475 eb3ca6be08baf59ad134eb802bfcf02a 406 Pfam PF00480 ROK family 89 392 3.1E-95 T 28-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 AM393_RS18475 eb3ca6be08baf59ad134eb802bfcf02a 406 SUPERFAMILY SSF53067 88 394 1.67E-54 T 28-03-2018 AM393_RS18475 eb3ca6be08baf59ad134eb802bfcf02a 406 SUPERFAMILY SSF46785 14 79 2.57E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS18475 eb3ca6be08baf59ad134eb802bfcf02a 406 Pfam PF01047 MarR family 25 63 1.0E-7 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM393_RS18475 eb3ca6be08baf59ad134eb802bfcf02a 406 Gene3D G3DSA:3.30.420.40 210 402 2.4E-47 T 28-03-2018 AM393_RS18475 eb3ca6be08baf59ad134eb802bfcf02a 406 Gene3D G3DSA:3.30.420.40 74 209 4.8E-18 T 28-03-2018 AM393_RS18475 eb3ca6be08baf59ad134eb802bfcf02a 406 ProSitePatterns PS01125 ROK family signature. 220 247 - T 28-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 AM393_RS18475 eb3ca6be08baf59ad134eb802bfcf02a 406 Gene3D G3DSA:1.10.10.10 13 73 2.1E-9 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS08915 be52181802f6179c66240d12c3a64b47 507 SUPERFAMILY SSF47364 204 283 1.83E-22 T 28-03-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AM393_RS08915 be52181802f6179c66240d12c3a64b47 507 SMART SM00963 209 289 1.2E-24 T 28-03-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AM393_RS08915 be52181802f6179c66240d12c3a64b47 507 Pfam PF00448 SRP54-type protein, GTPase domain 303 503 8.2E-79 T 28-03-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AM393_RS08915 be52181802f6179c66240d12c3a64b47 507 SUPERFAMILY SSF52540 296 503 1.0E-53 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS08915 be52181802f6179c66240d12c3a64b47 507 SMART SM00962 303 504 6.4E-124 T 28-03-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AM393_RS08915 be52181802f6179c66240d12c3a64b47 507 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 477 490 - T 28-03-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AM393_RS08915 be52181802f6179c66240d12c3a64b47 507 Pfam PF02881 SRP54-type protein, helical bundle domain 220 285 2.1E-13 T 28-03-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AM393_RS08915 be52181802f6179c66240d12c3a64b47 507 Gene3D G3DSA:3.40.50.300 296 505 7.9E-41 T 28-03-2018 AM393_RS08915 be52181802f6179c66240d12c3a64b47 507 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 232 504 65.212 T 28-03-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 AM393_RS08915 be52181802f6179c66240d12c3a64b47 507 SMART SM00382 302 493 1.0E-10 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS08915 be52181802f6179c66240d12c3a64b47 507 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 232 503 2.5E-115 T 28-03-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 AM393_RS08915 be52181802f6179c66240d12c3a64b47 507 Gene3D G3DSA:1.20.120.140 196 290 3.9E-23 T 28-03-2018 AM393_RS11255 2633179501baea63269eff7b8fb30722 308 SUPERFAMILY SSF53850 91 295 8.91E-40 T 28-03-2018 AM393_RS11255 2633179501baea63269eff7b8fb30722 308 Gene3D G3DSA:3.40.190.10 184 269 5.6E-17 T 28-03-2018 AM393_RS11255 2633179501baea63269eff7b8fb30722 308 Gene3D G3DSA:1.10.10.10 1 84 1.8E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS11255 2633179501baea63269eff7b8fb30722 308 Gene3D G3DSA:3.40.190.10 97 183 5.1E-11 T 28-03-2018 AM393_RS11255 2633179501baea63269eff7b8fb30722 308 SUPERFAMILY SSF46785 4 81 2.83E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS11255 2633179501baea63269eff7b8fb30722 308 Pfam PF03466 LysR substrate binding domain 92 293 6.1E-22 T 28-03-2018 IPR005119 LysR, substrate-binding AM393_RS11255 2633179501baea63269eff7b8fb30722 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 65 5.6E-14 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS15385 beb4b3d6624bbce470ba9125719bb7de 383 Gene3D G3DSA:3.40.50.2000 185 367 2.5E-16 T 28-03-2018 AM393_RS15385 beb4b3d6624bbce470ba9125719bb7de 383 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 1 380 1.2E-182 T 28-03-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622 AM393_RS15385 beb4b3d6624bbce470ba9125719bb7de 383 Gene3D G3DSA:3.40.50.2000 1 184 6.6E-5 T 28-03-2018 AM393_RS15385 beb4b3d6624bbce470ba9125719bb7de 383 Pfam PF02684 Lipid-A-disaccharide synthetase 9 377 3.0E-151 T 28-03-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622 AM393_RS15385 beb4b3d6624bbce470ba9125719bb7de 383 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 6 382 43.211 T 28-03-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622 AM393_RS15385 beb4b3d6624bbce470ba9125719bb7de 383 SUPERFAMILY SSF53756 9 378 4.71E-29 T 28-03-2018 AM393_RS21410 be55257b71256f35847c80f4fae1e1ee 186 Pfam PF02627 Carboxymuconolactone decarboxylase family 51 122 2.8E-11 T 28-03-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AM393_RS21410 be55257b71256f35847c80f4fae1e1ee 186 SUPERFAMILY SSF69118 2 173 2.44E-41 T 28-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AM393_RS21410 be55257b71256f35847c80f4fae1e1ee 186 Gene3D G3DSA:1.20.1290.10 18 178 7.2E-29 T 28-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AM393_RS22950 a9458648370e41b4c2115b00d581a19e 509 SMART SM01003 4 137 7.5E-74 T 28-03-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal AM393_RS22950 a9458648370e41b4c2115b00d581a19e 509 PIRSF PIRSF000203 1 508 2.8E-282 T 28-03-2018 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0015992|GO:0055114 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 AM393_RS22950 a9458648370e41b4c2115b00d581a19e 509 SMART SM01002 146 311 6.1E-84 T 28-03-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain AM393_RS22950 a9458648370e41b4c2115b00d581a19e 509 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 426 508 5.3E-36 T 28-03-2018 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 AM393_RS22950 a9458648370e41b4c2115b00d581a19e 509 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 170 195 - T 28-03-2018 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 Reactome: R-HSA-71403 AM393_RS22950 a9458648370e41b4c2115b00d581a19e 509 TIGRFAM TIGR00561 pntA: NAD(P)(+) transhydrogenase (AB-specific), alpha subunit 2 509 1.5E-302 T 28-03-2018 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0015992|GO:0055114 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 AM393_RS22950 a9458648370e41b4c2115b00d581a19e 509 Gene3D G3DSA:3.40.50.720 196 377 7.5E-57 T 28-03-2018 AM393_RS22950 a9458648370e41b4c2115b00d581a19e 509 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 137 5.9E-51 T 28-03-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal AM393_RS22950 a9458648370e41b4c2115b00d581a19e 509 Gene3D G3DSA:3.40.50.720 1 195 7.9E-51 T 28-03-2018 AM393_RS22950 a9458648370e41b4c2115b00d581a19e 509 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 141 368 1.2E-75 T 28-03-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain AM393_RS22950 a9458648370e41b4c2115b00d581a19e 509 SUPERFAMILY SSF52283 1 168 1.87E-55 T 28-03-2018 AM393_RS22950 a9458648370e41b4c2115b00d581a19e 509 SUPERFAMILY SSF51735 137 317 4.64E-38 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS12745 5bcd8845312aac48a24cd9bdc5cd3a60 181 Pfam PF00929 Exonuclease 9 170 6.5E-36 T 28-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AM393_RS12745 5bcd8845312aac48a24cd9bdc5cd3a60 181 Hamap MF_00045 Oligoribonuclease [orn]. 3 181 45.179 T 28-03-2018 IPR022894 Oligoribonuclease GO:0000175 AM393_RS12745 5bcd8845312aac48a24cd9bdc5cd3a60 181 SMART SM00479 7 180 2.8E-21 T 28-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AM393_RS12745 5bcd8845312aac48a24cd9bdc5cd3a60 181 Gene3D G3DSA:3.30.420.10 2 181 3.8E-28 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM393_RS12745 5bcd8845312aac48a24cd9bdc5cd3a60 181 SUPERFAMILY SSF53098 3 180 2.73E-50 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM393_RS15275 878d328206c25df25780312a4bedf1e6 232 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 2 229 5.5E-129 T 28-03-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AM393_RS15275 878d328206c25df25780312a4bedf1e6 232 Gene3D G3DSA:3.40.50.1580 1 232 4.9E-57 T 28-03-2018 AM393_RS15275 878d328206c25df25780312a4bedf1e6 232 Pfam PF01048 Phosphorylase superfamily 2 224 6.4E-48 T 28-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AM393_RS15275 878d328206c25df25780312a4bedf1e6 232 Hamap MF_01684 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [mtnN]. 2 229 47.656 T 28-03-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AM393_RS15275 878d328206c25df25780312a4bedf1e6 232 SUPERFAMILY SSF53167 1 229 9.56E-74 T 28-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AM393_RS12605 3d936cdea3b6918d842a7106afd6fd73 548 PRINTS PR00298 60kDa chaperonin signature 27 53 2.5E-74 T 28-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AM393_RS12605 3d936cdea3b6918d842a7106afd6fd73 548 PRINTS PR00298 60kDa chaperonin signature 83 110 2.5E-74 T 28-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AM393_RS12605 3d936cdea3b6918d842a7106afd6fd73 548 PRINTS PR00298 60kDa chaperonin signature 398 419 2.5E-74 T 28-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AM393_RS12605 3d936cdea3b6918d842a7106afd6fd73 548 PRINTS PR00298 60kDa chaperonin signature 350 375 2.5E-74 T 28-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AM393_RS12605 3d936cdea3b6918d842a7106afd6fd73 548 PRINTS PR00298 60kDa chaperonin signature 268 291 2.5E-74 T 28-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AM393_RS12605 3d936cdea3b6918d842a7106afd6fd73 548 SUPERFAMILY SSF52029 184 376 6.98E-83 T 28-03-2018 IPR027409 GroEL-like apical domain AM393_RS12605 3d936cdea3b6918d842a7106afd6fd73 548 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 28-03-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AM393_RS12605 3d936cdea3b6918d842a7106afd6fd73 548 Gene3D G3DSA:3.50.7.10 186 373 2.1E-97 T 28-03-2018 IPR027409 GroEL-like apical domain AM393_RS12605 3d936cdea3b6918d842a7106afd6fd73 548 Gene3D G3DSA:1.10.560.10 374 516 3.2E-24 T 28-03-2018 IPR027413 GroEL-like equatorial domain AM393_RS12605 3d936cdea3b6918d842a7106afd6fd73 548 Gene3D G3DSA:1.10.560.10 1 185 9.6E-44 T 28-03-2018 IPR027413 GroEL-like equatorial domain AM393_RS12605 3d936cdea3b6918d842a7106afd6fd73 548 Hamap MF_00600 60 kDa chaperonin [groL]. 2 547 41.626 T 28-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AM393_RS12605 3d936cdea3b6918d842a7106afd6fd73 548 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 526 9.3E-257 T 28-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AM393_RS12605 3d936cdea3b6918d842a7106afd6fd73 548 SUPERFAMILY SSF54849 137 203 1.88E-24 T 28-03-2018 AM393_RS12605 3d936cdea3b6918d842a7106afd6fd73 548 SUPERFAMILY SSF48592 406 521 1.53E-77 T 28-03-2018 AM393_RS12605 3d936cdea3b6918d842a7106afd6fd73 548 SUPERFAMILY SSF48592 7 134 1.53E-77 T 28-03-2018 AM393_RS12605 3d936cdea3b6918d842a7106afd6fd73 548 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 523 1.6E-95 T 28-03-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 AM393_RS25990 4c2a68df9041a65fd4b9dce6c7666243 245 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 45 225 6.6E-78 T 28-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM393_RS25990 4c2a68df9041a65fd4b9dce6c7666243 245 Pfam PF01578 Cytochrome C assembly protein 29 184 1.9E-29 T 28-03-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 AM393_RS25990 4c2a68df9041a65fd4b9dce6c7666243 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 201 225 3.7E-59 T 28-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM393_RS25990 4c2a68df9041a65fd4b9dce6c7666243 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 45 62 3.7E-59 T 28-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM393_RS25990 4c2a68df9041a65fd4b9dce6c7666243 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 100 120 3.7E-59 T 28-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM393_RS25990 4c2a68df9041a65fd4b9dce6c7666243 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 121 141 3.7E-59 T 28-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM393_RS25990 4c2a68df9041a65fd4b9dce6c7666243 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 62 82 3.7E-59 T 28-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM393_RS25990 4c2a68df9041a65fd4b9dce6c7666243 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 156 182 3.7E-59 T 28-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM393_RS08130 a5e245989fd248252e12d36ec04cdfcd 272 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 119 190 7.6E-9 T 28-03-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase AM393_RS08130 a5e245989fd248252e12d36ec04cdfcd 272 Gene3D G3DSA:3.40.50.10860 1 111 1.0E-38 T 28-03-2018 AM393_RS08130 a5e245989fd248252e12d36ec04cdfcd 272 SUPERFAMILY SSF51735 102 269 3.8E-44 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS08130 a5e245989fd248252e12d36ec04cdfcd 272 Gene3D G3DSA:3.40.50.720 112 272 6.8E-30 T 28-03-2018 AM393_RS08130 a5e245989fd248252e12d36ec04cdfcd 272 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 6 88 1.8E-24 T 28-03-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 AM393_RS08130 a5e245989fd248252e12d36ec04cdfcd 272 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 3 270 2.3E-100 T 28-03-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 AM393_RS08130 a5e245989fd248252e12d36ec04cdfcd 272 SUPERFAMILY SSF53223 2 101 2.36E-32 T 28-03-2018 AM393_RS08130 a5e245989fd248252e12d36ec04cdfcd 272 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 1 269 32.978 T 28-03-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 AM393_RS11980 242ac03fc016a9ea947445d0407bfced 169 Pfam PF00583 Acetyltransferase (GNAT) family 44 145 1.5E-9 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AM393_RS11980 242ac03fc016a9ea947445d0407bfced 169 Gene3D G3DSA:3.40.630.30 1 163 1.5E-22 T 28-03-2018 AM393_RS11980 242ac03fc016a9ea947445d0407bfced 169 SUPERFAMILY SSF55729 1 154 9.01E-22 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM393_RS12855 7078998fda6e6efbe5420c4ddf0960f4 545 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 183 195 - T 28-03-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AM393_RS12855 7078998fda6e6efbe5420c4ddf0960f4 545 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 285 439 3.5E-28 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AM393_RS12855 7078998fda6e6efbe5420c4ddf0960f4 545 Gene3D G3DSA:1.20.140.10 276 449 1.4E-33 T 28-03-2018 AM393_RS12855 7078998fda6e6efbe5420c4ddf0960f4 545 SUPERFAMILY SSF47203 283 443 3.22E-40 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AM393_RS12855 7078998fda6e6efbe5420c4ddf0960f4 545 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 181 273 7.9E-15 T 28-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AM393_RS12855 7078998fda6e6efbe5420c4ddf0960f4 545 SUPERFAMILY SSF56645 61 282 4.37E-31 T 28-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AM393_RS12855 7078998fda6e6efbe5420c4ddf0960f4 545 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 398 417 - T 28-03-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AM393_RS12855 7078998fda6e6efbe5420c4ddf0960f4 545 Gene3D G3DSA:2.40.110.10 179 275 1.6E-19 T 28-03-2018 AM393_RS23450 85f9aa86edf41155999dcad4451db0fa 524 Pfam PF02653 Branched-chain amino acid transport system / permease component 232 507 3.5E-50 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AM393_RS23450 85f9aa86edf41155999dcad4451db0fa 524 Gene3D G3DSA:1.10.3470.10 171 511 4.1E-50 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AM393_RS23450 85f9aa86edf41155999dcad4451db0fa 524 TIGRFAM TIGR03409 urea_trans_UrtB: urea ABC transporter, permease protein UrtB 230 521 4.0E-129 T 28-03-2018 IPR017779 ABC transporter, urea permease protein UrtB, bacterial-type AM393_RS23450 85f9aa86edf41155999dcad4451db0fa 524 SUPERFAMILY SSF48371 113 220 1.32E-5 T 28-03-2018 IPR016024 Armadillo-type fold GO:0005488 AM393_RS26855 5105b3a2d49ffee92c5da4fd7da9302b 315 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 129 144 - T 28-03-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 AM393_RS26855 5105b3a2d49ffee92c5da4fd7da9302b 315 SMART SM01400 4 121 5.7E-76 T 28-03-2018 AM393_RS26855 5105b3a2d49ffee92c5da4fd7da9302b 315 Gene3D G3DSA:3.40.50.2020 151 307 6.2E-42 T 28-03-2018 AM393_RS26855 5105b3a2d49ffee92c5da4fd7da9302b 315 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 4 121 1.9E-49 T 28-03-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 AM393_RS26855 5105b3a2d49ffee92c5da4fd7da9302b 315 SUPERFAMILY SSF53271 69 306 1.12E-66 T 28-03-2018 IPR029057 Phosphoribosyltransferase-like AM393_RS26855 5105b3a2d49ffee92c5da4fd7da9302b 315 Pfam PF14572 Phosphoribosyl synthetase-associated domain 204 313 1.2E-30 T 28-03-2018 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 AM393_RS26855 5105b3a2d49ffee92c5da4fd7da9302b 315 Hamap MF_00583_B Ribose-phosphate pyrophosphokinase [prs]. 4 314 49.711 T 28-03-2018 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 AM393_RS26855 5105b3a2d49ffee92c5da4fd7da9302b 315 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 4 314 2.2E-126 T 28-03-2018 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 AM393_RS26855 5105b3a2d49ffee92c5da4fd7da9302b 315 Gene3D G3DSA:3.40.50.2020 1 150 8.5E-66 T 28-03-2018 AM393_RS11020 10ae11a357248c0ece55247792b8853a 378 Pfam PF03811 InsA N-terminal domain 74 101 3.7E-6 T 28-03-2018 IPR003220 InsA N-terminal domain GO:0006313 AM393_RS26770 e45e4e61fc2fa28519f815fbd651f6b2 294 Gene3D G3DSA:1.10.3720.10 42 294 2.9E-31 T 28-03-2018 AM393_RS26770 e45e4e61fc2fa28519f815fbd651f6b2 294 SUPERFAMILY SSF161098 100 279 4.19E-27 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS26770 e45e4e61fc2fa28519f815fbd651f6b2 294 TIGRFAM TIGR01183 ntrB: nitrate ABC transporter, permease protein 86 280 1.1E-72 T 28-03-2018 IPR005889 Nitrate transport permease GO:0015112|GO:0015706|GO:0016021 AM393_RS26770 e45e4e61fc2fa28519f815fbd651f6b2 294 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 120 277 1.9E-20 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS04510 ac88912abe507f6c39ef96bb96aad16e 175 Gene3D G3DSA:3.30.70.20 1 19 0.015 T 28-03-2018 AM393_RS04510 ac88912abe507f6c39ef96bb96aad16e 175 Pfam PF13247 4Fe-4S dicluster domain 55 104 5.1E-8 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM393_RS04510 ac88912abe507f6c39ef96bb96aad16e 175 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 89 100 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM393_RS04510 ac88912abe507f6c39ef96bb96aad16e 175 Gene3D G3DSA:3.30.70.20 20 71 1.9E-8 T 28-03-2018 AM393_RS04510 ac88912abe507f6c39ef96bb96aad16e 175 Pfam PF12798 4Fe-4S binding domain 131 151 0.019 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM393_RS04510 ac88912abe507f6c39ef96bb96aad16e 175 Gene3D G3DSA:3.30.70.20 72 125 1.3E-17 T 28-03-2018 AM393_RS04510 ac88912abe507f6c39ef96bb96aad16e 175 Gene3D G3DSA:3.30.70.20 126 173 1.5E-8 T 28-03-2018 AM393_RS04510 ac88912abe507f6c39ef96bb96aad16e 175 SUPERFAMILY SSF54862 1 170 2.27E-42 T 28-03-2018 AM393_RS10405 c6cfb7b63d7588c2731ef7f69bf3e75f 392 Hamap MF_01530 Multidrug resistance protein MdtL [mdtL]. 1 392 37.669 T 28-03-2018 IPR023697 Multidrug resistance protein MdtL GO:0005215|GO:0005886 AM393_RS10405 c6cfb7b63d7588c2731ef7f69bf3e75f 392 Gene3D G3DSA:1.20.1250.20 1 192 5.1E-34 T 28-03-2018 AM393_RS10405 c6cfb7b63d7588c2731ef7f69bf3e75f 392 Gene3D G3DSA:1.20.1250.20 198 391 1.7E-10 T 28-03-2018 AM393_RS10405 c6cfb7b63d7588c2731ef7f69bf3e75f 392 SUPERFAMILY SSF103473 4 381 3.66E-56 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS10405 c6cfb7b63d7588c2731ef7f69bf3e75f 392 Pfam PF07690 Major Facilitator Superfamily 11 342 4.7E-45 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS13075 8b7863f4ad78775335bd46a47076f788 457 Gene3D G3DSA:3.40.50.720 1 90 1.0E-12 T 28-03-2018 AM393_RS13075 8b7863f4ad78775335bd46a47076f788 457 Pfam PF08245 Mur ligase middle domain 108 291 1.0E-17 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AM393_RS13075 8b7863f4ad78775335bd46a47076f788 457 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 2 449 1.4E-271 T 28-03-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 AM393_RS13075 8b7863f4ad78775335bd46a47076f788 457 SUPERFAMILY SSF51984 1 90 5.62E-24 T 28-03-2018 AM393_RS13075 8b7863f4ad78775335bd46a47076f788 457 Gene3D G3DSA:3.90.190.20 313 451 4.0E-27 T 28-03-2018 AM393_RS13075 8b7863f4ad78775335bd46a47076f788 457 SUPERFAMILY SSF53244 312 448 1.06E-36 T 28-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AM393_RS13075 8b7863f4ad78775335bd46a47076f788 457 SUPERFAMILY SSF53623 95 308 1.13E-47 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AM393_RS13075 8b7863f4ad78775335bd46a47076f788 457 Pfam PF02875 Mur ligase family, glutamate ligase domain 312 360 7.8E-10 T 28-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AM393_RS13075 8b7863f4ad78775335bd46a47076f788 457 Pfam PF01225 Mur ligase family, catalytic domain 2 101 2.0E-19 T 28-03-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 AM393_RS13075 8b7863f4ad78775335bd46a47076f788 457 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 1 450 59.467 T 28-03-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 AM393_RS13075 8b7863f4ad78775335bd46a47076f788 457 Gene3D G3DSA:3.40.1190.10 91 312 2.8E-37 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AM393_RS10855 822acf5348e7116759835a2df07ede06 707 Gene3D G3DSA:3.20.20.70 279 589 1.5E-53 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM393_RS10855 822acf5348e7116759835a2df07ede06 707 Gene3D G3DSA:2.70.98.60 1 273 1.1E-64 T 28-03-2018 AM393_RS10855 822acf5348e7116759835a2df07ede06 707 ProSitePatterns PS00512 Alpha-galactosidase signature. 322 337 - T 28-03-2018 IPR000111 Glycoside hydrolase family 27/36, conserved site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 AM393_RS10855 822acf5348e7116759835a2df07ede06 707 Pfam PF16874 Glycosyl hydrolase family 36 C-terminal domain 606 693 3.4E-9 T 28-03-2018 IPR031705 Glycosyl hydrolase family 36, C-terminal KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 AM393_RS10855 822acf5348e7116759835a2df07ede06 707 Pfam PF16875 Glycosyl hydrolase family 36 N-terminal domain 24 236 8.8E-43 T 28-03-2018 IPR031704 Glycosyl hydrolase family 36, N-terminal KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 AM393_RS10855 822acf5348e7116759835a2df07ede06 707 SUPERFAMILY SSF51445 289 620 1.08E-108 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily AM393_RS10855 822acf5348e7116759835a2df07ede06 707 PIRSF PIRSF005536 1 707 6.9E-241 T 28-03-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 AM393_RS10855 822acf5348e7116759835a2df07ede06 707 Gene3D G3DSA:2.60.40.1180 590 707 2.1E-16 T 28-03-2018 AM393_RS10855 822acf5348e7116759835a2df07ede06 707 Pfam PF02065 Melibiase 255 592 4.2E-118 T 28-03-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 AM393_RS10855 822acf5348e7116759835a2df07ede06 707 PRINTS PR00743 Glycosyl hydrolase family 36 signature 205 220 1.3E-62 T 28-03-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 AM393_RS10855 822acf5348e7116759835a2df07ede06 707 PRINTS PR00743 Glycosyl hydrolase family 36 signature 321 336 1.3E-62 T 28-03-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 AM393_RS10855 822acf5348e7116759835a2df07ede06 707 PRINTS PR00743 Glycosyl hydrolase family 36 signature 293 307 1.3E-62 T 28-03-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 AM393_RS10855 822acf5348e7116759835a2df07ede06 707 PRINTS PR00743 Glycosyl hydrolase family 36 signature 429 444 1.3E-62 T 28-03-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 AM393_RS10855 822acf5348e7116759835a2df07ede06 707 PRINTS PR00743 Glycosyl hydrolase family 36 signature 371 393 1.3E-62 T 28-03-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 AM393_RS10855 822acf5348e7116759835a2df07ede06 707 PRINTS PR00743 Glycosyl hydrolase family 36 signature 477 493 1.3E-62 T 28-03-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 AM393_RS10855 822acf5348e7116759835a2df07ede06 707 PRINTS PR00743 Glycosyl hydrolase family 36 signature 256 276 1.3E-62 T 28-03-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 AM393_RS10855 822acf5348e7116759835a2df07ede06 707 PRINTS PR00743 Glycosyl hydrolase family 36 signature 502 518 1.3E-62 T 28-03-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 AM393_RS05425 34ae76859782fbd1fd295d8987d095a3 231 Hamap MF_00759 DNA mismatch repair protein MutH [mutH]. 1 231 156.536 T 28-03-2018 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 AM393_RS05425 34ae76859782fbd1fd295d8987d095a3 231 TIGRFAM TIGR02248 mutH_TIGR: DNA mismatch repair endonuclease MutH 10 226 8.2E-113 T 28-03-2018 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 AM393_RS05425 34ae76859782fbd1fd295d8987d095a3 231 SUPERFAMILY SSF52980 8 227 2.47E-80 T 28-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AM393_RS05425 34ae76859782fbd1fd295d8987d095a3 231 Pfam PF02976 DNA mismatch repair enzyme MutH 59 157 2.1E-33 T 28-03-2018 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 AM393_RS05425 34ae76859782fbd1fd295d8987d095a3 231 Gene3D G3DSA:3.40.600.10 7 229 6.2E-56 T 28-03-2018 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 AM393_RS05425 34ae76859782fbd1fd295d8987d095a3 231 SMART SM00927 59 157 2.0E-64 T 28-03-2018 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 AM393_RS11180 e5eb326942a09b30a25117c892f27bd3 112 Pfam PF04219 Protein of unknown function, DUF 10 98 5.7E-41 T 28-03-2018 IPR007335 Protein of unknown function DUF413 AM393_RS04690 b0e4da20ab33f9f39070c31298587b62 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 5.7E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS04690 b0e4da20ab33f9f39070c31298587b62 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 5.7E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS04690 b0e4da20ab33f9f39070c31298587b62 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 5.7E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS04690 b0e4da20ab33f9f39070c31298587b62 295 Gene3D G3DSA:3.40.190.10 185 268 2.5E-15 T 28-03-2018 AM393_RS04690 b0e4da20ab33f9f39070c31298587b62 295 Gene3D G3DSA:3.40.190.10 92 184 1.9E-19 T 28-03-2018 AM393_RS04690 b0e4da20ab33f9f39070c31298587b62 295 SUPERFAMILY SSF46785 2 112 2.07E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS04690 b0e4da20ab33f9f39070c31298587b62 295 Gene3D G3DSA:1.10.10.10 1 85 1.1E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS04690 b0e4da20ab33f9f39070c31298587b62 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 1.2E-16 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS04690 b0e4da20ab33f9f39070c31298587b62 295 Pfam PF03466 LysR substrate binding domain 90 294 2.3E-29 T 28-03-2018 IPR005119 LysR, substrate-binding AM393_RS04690 b0e4da20ab33f9f39070c31298587b62 295 SUPERFAMILY SSF53850 92 295 3.8E-33 T 28-03-2018 AM393_RS06945 d39e1060d967a6c9efa49403fae9ed62 613 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 572 598 - T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM393_RS06945 d39e1060d967a6c9efa49403fae9ed62 613 Gene3D G3DSA:1.10.10.10 541 612 6.8E-27 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS06945 d39e1060d967a6c9efa49403fae9ed62 613 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 375 611 1.3E-120 T 28-03-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 AM393_RS06945 d39e1060d967a6c9efa49403fae9ed62 613 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 4 612 46.88 T 28-03-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 AM393_RS06945 d39e1060d967a6c9efa49403fae9ed62 613 PRINTS PR00046 Major sigma-70 factor signature 427 435 6.3E-31 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM393_RS06945 d39e1060d967a6c9efa49403fae9ed62 613 PRINTS PR00046 Major sigma-70 factor signature 572 587 6.3E-31 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM393_RS06945 d39e1060d967a6c9efa49403fae9ed62 613 PRINTS PR00046 Major sigma-70 factor signature 551 563 6.3E-31 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM393_RS06945 d39e1060d967a6c9efa49403fae9ed62 613 PRINTS PR00046 Major sigma-70 factor signature 587 598 6.3E-31 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM393_RS06945 d39e1060d967a6c9efa49403fae9ed62 613 PRINTS PR00046 Major sigma-70 factor signature 403 416 6.3E-31 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM393_RS06945 d39e1060d967a6c9efa49403fae9ed62 613 SUPERFAMILY SSF88659 452 525 8.78E-21 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM393_RS06945 d39e1060d967a6c9efa49403fae9ed62 613 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 375 600 3.5E-38 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM393_RS06945 d39e1060d967a6c9efa49403fae9ed62 613 Pfam PF04539 Sigma-70 region 3 458 533 3.5E-29 T 28-03-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM393_RS06945 d39e1060d967a6c9efa49403fae9ed62 613 Pfam PF00140 Sigma-70 factor, region 1.2 96 126 1.8E-12 T 28-03-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM393_RS06945 d39e1060d967a6c9efa49403fae9ed62 613 Gene3D G3DSA:1.10.10.10 449 499 7.9E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS06945 d39e1060d967a6c9efa49403fae9ed62 613 SUPERFAMILY SSF88659 509 611 2.55E-25 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM393_RS06945 d39e1060d967a6c9efa49403fae9ed62 613 Pfam PF04546 Sigma-70, non-essential region 137 348 6.3E-75 T 28-03-2018 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM393_RS06945 d39e1060d967a6c9efa49403fae9ed62 613 Gene3D G3DSA:1.10.601.10 3 112 2.6E-13 T 28-03-2018 AM393_RS06945 d39e1060d967a6c9efa49403fae9ed62 613 Gene3D G3DSA:1.10.601.10 113 448 5.2E-109 T 28-03-2018 AM393_RS06945 d39e1060d967a6c9efa49403fae9ed62 613 Pfam PF04545 Sigma-70, region 4 547 600 1.0E-18 T 28-03-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM393_RS06945 d39e1060d967a6c9efa49403fae9ed62 613 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 403 416 - T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM393_RS06945 d39e1060d967a6c9efa49403fae9ed62 613 Pfam PF03979 Sigma-70 factor, region 1.1 4 79 4.6E-30 T 28-03-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 AM393_RS06945 d39e1060d967a6c9efa49403fae9ed62 613 SUPERFAMILY SSF88946 113 446 3.25E-104 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM393_RS06945 d39e1060d967a6c9efa49403fae9ed62 613 Pfam PF04542 Sigma-70 region 2 379 448 1.7E-21 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM393_RS05520 645e8a2eb3ec43b8a0cb9e189d6d9874 300 SUPERFAMILY SSF161098 23 300 2.62E-71 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS05520 645e8a2eb3ec43b8a0cb9e189d6d9874 300 Gene3D G3DSA:1.10.3720.10 17 287 1.4E-43 T 28-03-2018 AM393_RS05520 645e8a2eb3ec43b8a0cb9e189d6d9874 300 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 119 294 9.0E-18 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS16080 146013c7f6617f5302b6fdd4d2e22edd 67 ProDom PD073772 MEMBRANE TRANSMEMBRANE YAIZ INNER ECS0430 GENOME 1 66 3.0E-24 T 28-03-2018 IPR020490 Uncharacterised protein family YaiZ AM393_RS16080 146013c7f6617f5302b6fdd4d2e22edd 67 Pfam PF10953 Protein of unknown function (DUF2754) 1 65 7.9E-45 T 28-03-2018 IPR020490 Uncharacterised protein family YaiZ AM393_RS25890 2edae6e242f26175853f30f948eda820 1038 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 1.1E-97 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS25890 2edae6e242f26175853f30f948eda820 1038 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 1.1E-97 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS25890 2edae6e242f26175853f30f948eda820 1038 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 1.1E-97 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS25890 2edae6e242f26175853f30f948eda820 1038 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 1.1E-97 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS25890 2edae6e242f26175853f30f948eda820 1038 PRINTS PR00702 Acriflavin resistance protein family signature 619 633 1.1E-97 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS25890 2edae6e242f26175853f30f948eda820 1038 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 1.1E-97 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS25890 2edae6e242f26175853f30f948eda820 1038 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 1.1E-97 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS25890 2edae6e242f26175853f30f948eda820 1038 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 1.1E-97 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS25890 2edae6e242f26175853f30f948eda820 1038 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 1.1E-97 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS25890 2edae6e242f26175853f30f948eda820 1038 SUPERFAMILY SSF82866 835 1021 8.24E-43 T 28-03-2018 AM393_RS25890 2edae6e242f26175853f30f948eda820 1038 SUPERFAMILY SSF82693 668 717 5.75E-25 T 28-03-2018 AM393_RS25890 2edae6e242f26175853f30f948eda820 1038 SUPERFAMILY SSF82693 804 852 5.75E-25 T 28-03-2018 AM393_RS25890 2edae6e242f26175853f30f948eda820 1038 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1027 0.0 T 28-03-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 AM393_RS25890 2edae6e242f26175853f30f948eda820 1038 Gene3D G3DSA:3.30.70.1430 567 667 5.9E-19 T 28-03-2018 AM393_RS25890 2edae6e242f26175853f30f948eda820 1038 Pfam PF00873 AcrB/AcrD/AcrF family 1 1021 0.0 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS25890 2edae6e242f26175853f30f948eda820 1038 Gene3D G3DSA:3.30.70.1320 137 197 2.0E-4 T 28-03-2018 AM393_RS25890 2edae6e242f26175853f30f948eda820 1038 SUPERFAMILY SSF82693 135 182 2.96E-24 T 28-03-2018 AM393_RS25890 2edae6e242f26175853f30f948eda820 1038 SUPERFAMILY SSF82693 274 329 2.96E-24 T 28-03-2018 AM393_RS25890 2edae6e242f26175853f30f948eda820 1038 SUPERFAMILY SSF82714 183 271 4.32E-19 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM393_RS25890 2edae6e242f26175853f30f948eda820 1038 Gene3D G3DSA:3.30.70.1430 38 136 4.7E-25 T 28-03-2018 AM393_RS25890 2edae6e242f26175853f30f948eda820 1038 SUPERFAMILY SSF82693 565 665 3.35E-25 T 28-03-2018 AM393_RS25890 2edae6e242f26175853f30f948eda820 1038 Gene3D G3DSA:1.20.1640.10 286 508 4.5E-43 T 28-03-2018 AM393_RS25890 2edae6e242f26175853f30f948eda820 1038 SUPERFAMILY SSF82866 296 497 1.57E-47 T 28-03-2018 AM393_RS25890 2edae6e242f26175853f30f948eda820 1038 Gene3D G3DSA:1.20.1640.10 815 1023 5.3E-38 T 28-03-2018 AM393_RS25890 2edae6e242f26175853f30f948eda820 1038 SUPERFAMILY SSF82693 38 130 9.24E-24 T 28-03-2018 AM393_RS25890 2edae6e242f26175853f30f948eda820 1038 Gene3D G3DSA:3.30.2090.10 198 271 6.8E-14 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM393_RS25890 2edae6e242f26175853f30f948eda820 1038 Gene3D G3DSA:3.30.70.1440 668 764 5.9E-17 T 28-03-2018 AM393_RS25890 2edae6e242f26175853f30f948eda820 1038 SUPERFAMILY SSF82714 721 803 1.23E-17 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM393_RS03875 5a2e9e1f27c30e331fe06939c7c5d2e3 431 SUPERFAMILY SSF103473 19 429 2.88E-64 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS03875 5a2e9e1f27c30e331fe06939c7c5d2e3 431 ProSitePatterns PS00217 Sugar transport proteins signature 2. 132 157 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM393_RS03875 5a2e9e1f27c30e331fe06939c7c5d2e3 431 Pfam PF00083 Sugar (and other) transporter 24 419 3.2E-30 T 28-03-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 AM393_RS03875 5a2e9e1f27c30e331fe06939c7c5d2e3 431 TIGRFAM TIGR00883 2A0106: MFS transporter, metabolite:H+ symporter (MHS) family protein 30 417 2.2E-139 T 28-03-2018 IPR004736 Citrate-proton symport GO:0005215|GO:0006810|GO:0016021 AM393_RS03875 5a2e9e1f27c30e331fe06939c7c5d2e3 431 Gene3D G3DSA:1.20.1250.20 17 229 6.2E-25 T 28-03-2018 AM393_RS03875 5a2e9e1f27c30e331fe06939c7c5d2e3 431 Gene3D G3DSA:1.20.1250.20 230 428 1.1E-20 T 28-03-2018 AM393_RS17975 1a604077b3885d9a8024a0b9e6aef0cd 742 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 46 - T 28-03-2018 IPR010916 TonB box, conserved site AM393_RS17975 1a604077b3885d9a8024a0b9e6aef0cd 742 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 55 742 4.4E-139 T 28-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AM393_RS17975 1a604077b3885d9a8024a0b9e6aef0cd 742 Gene3D G3DSA:2.40.170.20 182 742 1.2E-80 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM393_RS17975 1a604077b3885d9a8024a0b9e6aef0cd 742 Pfam PF00593 TonB dependent receptor 283 739 1.1E-50 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM393_RS17975 1a604077b3885d9a8024a0b9e6aef0cd 742 Gene3D G3DSA:2.170.130.10 47 181 3.0E-35 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM393_RS17975 1a604077b3885d9a8024a0b9e6aef0cd 742 Pfam PF07715 TonB-dependent Receptor Plug Domain 54 168 3.1E-29 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM393_RS17975 1a604077b3885d9a8024a0b9e6aef0cd 742 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 725 742 - T 28-03-2018 IPR010917 TonB-dependent receptor, conserved site AM393_RS17975 1a604077b3885d9a8024a0b9e6aef0cd 742 SUPERFAMILY SSF56935 39 742 1.95E-132 T 28-03-2018 AM393_RS21465 cb76737f74568ea11dd309a38dd462a2 275 TIGRFAM TIGR00552 nadE: NAD+ synthetase 18 275 3.9E-83 T 28-03-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 AM393_RS21465 cb76737f74568ea11dd309a38dd462a2 275 Pfam PF02540 NAD synthase 23 265 3.2E-77 T 28-03-2018 IPR022310 NAD/GMP synthase AM393_RS21465 cb76737f74568ea11dd309a38dd462a2 275 Gene3D G3DSA:3.40.50.620 2 274 1.1E-55 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM393_RS21465 cb76737f74568ea11dd309a38dd462a2 275 Hamap MF_00193 NH(3)-dependent NAD(+) synthetase [nadE]. 17 268 31.274 T 28-03-2018 IPR022926 NH(3)-dependent NAD(+) synthetase GO:0008795|GO:0009435 KEGG: 00760+6.3.1.5 AM393_RS21465 cb76737f74568ea11dd309a38dd462a2 275 SUPERFAMILY SSF52402 3 273 1.7E-84 T 28-03-2018 AM393_RS01910 579fc8220a97a1aae6e1781c27a7a1ca 453 ProSitePatterns PS01276 Peptidase family U32 signature. 162 180 - T 28-03-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 AM393_RS01910 579fc8220a97a1aae6e1781c27a7a1ca 453 Pfam PF16325 Peptidase family U32 C-terminal domain 359 440 2.9E-20 T 28-03-2018 IPR032525 Peptidase family U32, C-terminal AM393_RS01910 579fc8220a97a1aae6e1781c27a7a1ca 453 Pfam PF01136 Peptidase family U32 75 343 1.6E-96 T 28-03-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 AM393_RS01910 579fc8220a97a1aae6e1781c27a7a1ca 453 Gene3D G3DSA:3.20.20.70 8 170 8.1E-4 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM393_RS24035 d38d6c9dcf38c4059cb7af1d782cb177 172 SUPERFAMILY SSF81301 5 166 2.13E-52 T 28-03-2018 AM393_RS24035 d38d6c9dcf38c4059cb7af1d782cb177 172 Pfam PF04229 GrpB protein 5 161 6.2E-50 T 28-03-2018 IPR007344 GrpB/Dephospho-CoA kinase AM393_RS24035 d38d6c9dcf38c4059cb7af1d782cb177 172 Gene3D G3DSA:3.30.460.10 2 169 5.9E-55 T 28-03-2018 AM393_RS13680 352bb476449ea19a4c067930227c2981 177 Gene3D G3DSA:3.40.630.30 4 169 6.0E-14 T 28-03-2018 AM393_RS13680 352bb476449ea19a4c067930227c2981 177 Pfam PF13508 Acetyltransferase (GNAT) domain 93 151 6.8E-7 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AM393_RS13680 352bb476449ea19a4c067930227c2981 177 SUPERFAMILY SSF55729 39 152 2.13E-12 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM393_RS08735 8d77a7874cd1d52cbf35492570275fd3 477 SUPERFAMILY SSF53756 5 476 4.54E-117 T 28-03-2018 AM393_RS08735 8d77a7874cd1d52cbf35492570275fd3 477 Pfam PF00534 Glycosyl transferases group 1 288 438 1.9E-13 T 28-03-2018 IPR001296 Glycosyl transferase, family 1 AM393_RS08735 8d77a7874cd1d52cbf35492570275fd3 477 Hamap MF_00484 Glycogen synthase [glgA]. 1 476 46.856 T 28-03-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 AM393_RS08735 8d77a7874cd1d52cbf35492570275fd3 477 Pfam PF08323 Starch synthase catalytic domain 2 234 1.8E-71 T 28-03-2018 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 AM393_RS08735 8d77a7874cd1d52cbf35492570275fd3 477 Gene3D G3DSA:3.40.50.2000 260 472 3.3E-34 T 28-03-2018 AM393_RS08735 8d77a7874cd1d52cbf35492570275fd3 477 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 1 476 1.9E-173 T 28-03-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 AM393_RS08735 8d77a7874cd1d52cbf35492570275fd3 477 Gene3D G3DSA:3.40.50.2000 18 259 8.7E-12 T 28-03-2018 AM393_RS05290 6de7225f4fbef1689ca388f28770abba 163 TIGRFAM TIGR04493 microcomp_PduM: microcompartment protein PduM 7 159 2.0E-55 T 28-03-2018 IPR030992 Microcompartment protein PduM GO:0005198 AM393_RS05290 6de7225f4fbef1689ca388f28770abba 163 Pfam PF15953 Putative propanediol utilisation 7 158 1.3E-53 T 28-03-2018 IPR030992 Microcompartment protein PduM GO:0005198 AM393_RS14550 19cfd45635c2c61efc0f91576d84c910 382 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 5 132 2.2E-52 T 28-03-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM393_RS14550 19cfd45635c2c61efc0f91576d84c910 382 SUPERFAMILY SSF52317 153 374 1.63E-64 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AM393_RS14550 19cfd45635c2c61efc0f91576d84c910 382 PRINTS PR00096 Glutamine amidotransferase superfamily signature 349 362 3.2E-11 T 28-03-2018 AM393_RS14550 19cfd45635c2c61efc0f91576d84c910 382 PRINTS PR00096 Glutamine amidotransferase superfamily signature 264 275 3.2E-11 T 28-03-2018 AM393_RS14550 19cfd45635c2c61efc0f91576d84c910 382 PRINTS PR00096 Glutamine amidotransferase superfamily signature 236 245 3.2E-11 T 28-03-2018 AM393_RS14550 19cfd45635c2c61efc0f91576d84c910 382 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 5 375 5.1E-152 T 28-03-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM393_RS14550 19cfd45635c2c61efc0f91576d84c910 382 Pfam PF00117 Glutamine amidotransferase class-I 197 372 1.1E-49 T 28-03-2018 IPR017926 Glutamine amidotransferase AM393_RS14550 19cfd45635c2c61efc0f91576d84c910 382 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 233 247 2.4E-40 T 28-03-2018 AM393_RS14550 19cfd45635c2c61efc0f91576d84c910 382 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 306 317 2.4E-40 T 28-03-2018 AM393_RS14550 19cfd45635c2c61efc0f91576d84c910 382 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 264 280 2.4E-40 T 28-03-2018 AM393_RS14550 19cfd45635c2c61efc0f91576d84c910 382 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 281 298 2.4E-40 T 28-03-2018 AM393_RS14550 19cfd45635c2c61efc0f91576d84c910 382 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 194 208 2.4E-40 T 28-03-2018 AM393_RS14550 19cfd45635c2c61efc0f91576d84c910 382 SUPERFAMILY SSF52021 3 144 1.96E-57 T 28-03-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM393_RS14550 19cfd45635c2c61efc0f91576d84c910 382 Gene3D G3DSA:3.40.50.880 152 379 4.3E-69 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AM393_RS14550 19cfd45635c2c61efc0f91576d84c910 382 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 3 378 48.724 T 28-03-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM393_RS14550 19cfd45635c2c61efc0f91576d84c910 382 Gene3D G3DSA:3.50.30.20 2 151 1.6E-63 T 28-03-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM393_RS14550 19cfd45635c2c61efc0f91576d84c910 382 PRINTS PR00097 Anthranilate synthase component II signature 264 275 1.1E-5 T 28-03-2018 AM393_RS14550 19cfd45635c2c61efc0f91576d84c910 382 PRINTS PR00097 Anthranilate synthase component II signature 236 245 1.1E-5 T 28-03-2018 AM393_RS14550 19cfd45635c2c61efc0f91576d84c910 382 PRINTS PR00097 Anthranilate synthase component II signature 349 362 1.1E-5 T 28-03-2018 AM393_RS14550 19cfd45635c2c61efc0f91576d84c910 382 SMART SM01097 3 133 8.6E-92 T 28-03-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM393_RS23415 0bd7d27398c030f5a8386ffd7465c33e 354 Pfam PF13377 Periplasmic binding protein-like domain 173 330 6.8E-31 T 28-03-2018 AM393_RS23415 0bd7d27398c030f5a8386ffd7465c33e 354 Gene3D G3DSA:3.40.50.2300 180 313 3.1E-36 T 28-03-2018 AM393_RS23415 0bd7d27398c030f5a8386ffd7465c33e 354 SUPERFAMILY SSF47413 5 60 6.57E-17 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM393_RS23415 0bd7d27398c030f5a8386ffd7465c33e 354 Gene3D G3DSA:1.10.260.40 6 58 1.2E-19 T 28-03-2018 AM393_RS23415 0bd7d27398c030f5a8386ffd7465c33e 354 SUPERFAMILY SSF53822 65 325 4.93E-50 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AM393_RS23415 0bd7d27398c030f5a8386ffd7465c33e 354 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 17 27 3.7E-6 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM393_RS23415 0bd7d27398c030f5a8386ffd7465c33e 354 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 7 17 3.7E-6 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM393_RS23415 0bd7d27398c030f5a8386ffd7465c33e 354 ProSitePatterns PS00356 LacI-type HTH domain signature. 8 26 - T 28-03-2018 AM393_RS23415 0bd7d27398c030f5a8386ffd7465c33e 354 SMART SM00354 5 75 5.8E-31 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM393_RS23415 0bd7d27398c030f5a8386ffd7465c33e 354 Gene3D G3DSA:3.40.50.2300 59 179 4.4E-19 T 28-03-2018 AM393_RS23415 0bd7d27398c030f5a8386ffd7465c33e 354 Pfam PF00356 Bacterial regulatory proteins, lacI family 7 52 8.1E-19 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM393_RS15070 7c2490dbd90e7a5144a5bfa066ea076c 308 Gene3D G3DSA:3.40.50.300 1 242 1.3E-63 T 28-03-2018 AM393_RS15070 7c2490dbd90e7a5144a5bfa066ea076c 308 SUPERFAMILY SSF52540 3 232 2.98E-62 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS15070 7c2490dbd90e7a5144a5bfa066ea076c 308 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS15070 7c2490dbd90e7a5144a5bfa066ea076c 308 Pfam PF00005 ABC transporter 21 165 6.0E-32 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS15070 7c2490dbd90e7a5144a5bfa066ea076c 308 SMART SM00382 30 213 4.4E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS14185 839fa36043b3baba3150b58aa370e4a7 529 Pfam PF16658 Class II release factor RF3, C-terminal domain 387 514 2.3E-46 T 28-03-2018 IPR032090 Peptide chain release factor 3, C-terminal AM393_RS14185 839fa36043b3baba3150b58aa370e4a7 529 SUPERFAMILY SSF54980 393 468 3.45E-17 T 28-03-2018 IPR035647 EF-G domain III/V-like AM393_RS14185 839fa36043b3baba3150b58aa370e4a7 529 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 4 527 52.592 T 28-03-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 AM393_RS14185 839fa36043b3baba3150b58aa370e4a7 529 Gene3D G3DSA:3.40.50.300 8 280 2.7E-36 T 28-03-2018 AM393_RS14185 839fa36043b3baba3150b58aa370e4a7 529 SUPERFAMILY SSF50447 262 393 1.57E-28 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain AM393_RS14185 839fa36043b3baba3150b58aa370e4a7 529 Gene3D G3DSA:3.30.70.870 394 469 9.2E-11 T 28-03-2018 AM393_RS14185 839fa36043b3baba3150b58aa370e4a7 529 PRINTS PR00315 GTP-binding elongation factor signature 101 112 6.6E-11 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM393_RS14185 839fa36043b3baba3150b58aa370e4a7 529 PRINTS PR00315 GTP-binding elongation factor signature 15 28 6.6E-11 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM393_RS14185 839fa36043b3baba3150b58aa370e4a7 529 PRINTS PR00315 GTP-binding elongation factor signature 137 146 6.6E-11 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM393_RS14185 839fa36043b3baba3150b58aa370e4a7 529 PRINTS PR00315 GTP-binding elongation factor signature 85 95 6.6E-11 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM393_RS14185 839fa36043b3baba3150b58aa370e4a7 529 PRINTS PR00315 GTP-binding elongation factor signature 65 73 6.6E-11 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM393_RS14185 839fa36043b3baba3150b58aa370e4a7 529 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 3 529 0.0 T 28-03-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 AM393_RS14185 839fa36043b3baba3150b58aa370e4a7 529 Pfam PF00009 Elongation factor Tu GTP binding domain 13 277 2.8E-46 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM393_RS14185 839fa36043b3baba3150b58aa370e4a7 529 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 15 156 1.4E-18 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AM393_RS14185 839fa36043b3baba3150b58aa370e4a7 529 SUPERFAMILY SSF52540 10 277 2.54E-84 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS14185 839fa36043b3baba3150b58aa370e4a7 529 Pfam PF03144 Elongation factor Tu domain 2 314 380 2.1E-10 T 28-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AM393_RS14185 839fa36043b3baba3150b58aa370e4a7 529 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 58 73 - T 28-03-2018 IPR031157 Tr-type G domain, conserved site AM393_RS14185 839fa36043b3baba3150b58aa370e4a7 529 Gene3D G3DSA:2.40.30.10 281 387 1.4E-21 T 28-03-2018 AM393_RS18485 efd14b52e6a888b9d874217156d21a7a 266 TIGRFAM TIGR00502 nagB: glucosamine-6-phosphate deaminase 1 259 8.5E-142 T 28-03-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70326 AM393_RS18485 efd14b52e6a888b9d874217156d21a7a 266 Gene3D G3DSA:3.40.50.1360 1 266 2.0E-86 T 28-03-2018 AM393_RS18485 efd14b52e6a888b9d874217156d21a7a 266 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 9 226 3.1E-20 T 28-03-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 AM393_RS18485 efd14b52e6a888b9d874217156d21a7a 266 ProSitePatterns PS01161 Glucosamine/galactosamine-6-phosphate isomerases signature. 125 143 - T 28-03-2018 IPR018321 Glucosamine-6-phosphate isomerase, conserved site GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70326 AM393_RS18485 efd14b52e6a888b9d874217156d21a7a 266 SUPERFAMILY SSF100950 1 263 1.26E-104 T 28-03-2018 AM393_RS18485 efd14b52e6a888b9d874217156d21a7a 266 Hamap MF_01241 Glucosamine-6-phosphate deaminase [nagB]. 1 247 40.875 T 28-03-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70326 AM393_RS08080 ba902dd93920abfc99f073f971ab35b9 379 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 38 369 2.5E-84 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AM393_RS08080 ba902dd93920abfc99f073f971ab35b9 379 Pfam PF00529 HlyD membrane-fusion protein of T1SS 151 354 1.5E-13 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AM393_RS08080 ba902dd93920abfc99f073f971ab35b9 379 Gene3D G3DSA:1.20.1600.10 24 336 1.2E-30 T 28-03-2018 AM393_RS08080 ba902dd93920abfc99f073f971ab35b9 379 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 61 287 8.8E-15 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AM393_RS08080 ba902dd93920abfc99f073f971ab35b9 379 SUPERFAMILY SSF111369 50 294 3.27E-86 T 28-03-2018 AM393_RS15570 3ad264793fd39274e62a50af9ef26fd4 293 Gene3D G3DSA:1.10.10.10 1 83 1.1E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS15570 3ad264793fd39274e62a50af9ef26fd4 293 Pfam PF03466 LysR substrate binding domain 86 289 1.5E-42 T 28-03-2018 IPR005119 LysR, substrate-binding AM393_RS15570 3ad264793fd39274e62a50af9ef26fd4 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 3.0E-18 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS15570 3ad264793fd39274e62a50af9ef26fd4 293 SUPERFAMILY SSF46785 1 85 5.45E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS15570 3ad264793fd39274e62a50af9ef26fd4 293 Gene3D G3DSA:3.40.190.10 84 175 1.5E-15 T 28-03-2018 AM393_RS15570 3ad264793fd39274e62a50af9ef26fd4 293 Gene3D G3DSA:3.40.190.10 176 262 1.2E-14 T 28-03-2018 AM393_RS15570 3ad264793fd39274e62a50af9ef26fd4 293 SUPERFAMILY SSF53850 86 289 9.12E-39 T 28-03-2018 AM393_RS04845 23b57360651138c3de5f41bb966edba4 475 Gene3D G3DSA:2.40.30.10 240 329 7.2E-23 T 28-03-2018 AM393_RS04845 23b57360651138c3de5f41bb966edba4 475 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 83 98 - T 28-03-2018 IPR031157 Tr-type G domain, conserved site AM393_RS04845 23b57360651138c3de5f41bb966edba4 475 PRINTS PR00315 GTP-binding elongation factor signature 163 172 7.0E-14 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM393_RS04845 23b57360651138c3de5f41bb966edba4 475 PRINTS PR00315 GTP-binding elongation factor signature 126 137 7.0E-14 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM393_RS04845 23b57360651138c3de5f41bb966edba4 475 PRINTS PR00315 GTP-binding elongation factor signature 110 120 7.0E-14 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM393_RS04845 23b57360651138c3de5f41bb966edba4 475 PRINTS PR00315 GTP-binding elongation factor signature 29 42 7.0E-14 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM393_RS04845 23b57360651138c3de5f41bb966edba4 475 PRINTS PR00315 GTP-binding elongation factor signature 90 98 7.0E-14 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM393_RS04845 23b57360651138c3de5f41bb966edba4 475 SUPERFAMILY SSF50447 243 328 7.95E-24 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain AM393_RS04845 23b57360651138c3de5f41bb966edba4 475 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 34 214 3.7E-14 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AM393_RS04845 23b57360651138c3de5f41bb966edba4 475 Pfam PF00009 Elongation factor Tu GTP binding domain 27 232 2.2E-44 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM393_RS04845 23b57360651138c3de5f41bb966edba4 475 Gene3D G3DSA:3.40.50.300 4 239 1.7E-40 T 28-03-2018 AM393_RS04845 23b57360651138c3de5f41bb966edba4 475 SUPERFAMILY SSF52540 24 253 9.26E-59 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS04845 23b57360651138c3de5f41bb966edba4 475 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 28 434 5.2E-211 T 28-03-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 AM393_RS04845 23b57360651138c3de5f41bb966edba4 475 Gene3D G3DSA:2.40.30.10 332 436 3.1E-20 T 28-03-2018 AM393_RS04845 23b57360651138c3de5f41bb966edba4 475 SUPERFAMILY SSF50465 338 434 7.19E-31 T 28-03-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal AM393_RS04845 23b57360651138c3de5f41bb966edba4 475 Hamap MF_00062 Sulfate adenylyltransferase subunit 1 [cysN]. 19 475 54.087 T 28-03-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 AM393_RS12965 a385c288a761ba960899e30650693c23 324 Pfam PF00892 EamA-like transporter family 4 123 3.0E-14 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM393_RS12965 a385c288a761ba960899e30650693c23 324 SUPERFAMILY SSF103481 44 143 3.27E-9 T 28-03-2018 AM393_RS18370 faac4a27bbcfc0054b324f3f108c499e 556 Gene3D G3DSA:2.40.160.50 175 556 2.1E-42 T 28-03-2018 AM393_RS18370 faac4a27bbcfc0054b324f3f108c499e 556 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 207 520 3.1E-91 T 28-03-2018 IPR005565 Haemolysin activator HlyB, C-terminal AM393_RS18370 faac4a27bbcfc0054b324f3f108c499e 556 PIRSF PIRSF029745 1 556 4.7E-126 T 28-03-2018 IPR027282 Two partner secretion pathway transporter GO:0015031 AM393_RS18370 faac4a27bbcfc0054b324f3f108c499e 556 Gene3D G3DSA:3.10.20.310 78 148 4.3E-9 T 28-03-2018 AM393_RS18370 faac4a27bbcfc0054b324f3f108c499e 556 Pfam PF17287 POTRA domain 149 202 6.5E-15 T 28-03-2018 IPR035251 ShlB, POTRA domain AM393_RS18370 faac4a27bbcfc0054b324f3f108c499e 556 Pfam PF08479 POTRA domain, ShlB-type 74 146 2.3E-13 T 28-03-2018 IPR013686 Polypeptide-transport-associated, ShlB-type AM393_RS24225 e4b0514540caaf72cc078b89ec3ba139 178 Pfam PF13302 Acetyltransferase (GNAT) domain 9 149 1.3E-26 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AM393_RS24225 e4b0514540caaf72cc078b89ec3ba139 178 Gene3D G3DSA:3.40.630.30 2 178 1.4E-32 T 28-03-2018 AM393_RS24225 e4b0514540caaf72cc078b89ec3ba139 178 SUPERFAMILY SSF55729 1 174 8.83E-44 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM393_RS13765 5fba6eef166a28f4b6d090ef8c1a56f7 139 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 114 2.4E-12 T 28-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AM393_RS13765 5fba6eef166a28f4b6d090ef8c1a56f7 139 Gene3D G3DSA:3.10.180.10 1 138 5.1E-26 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM393_RS13765 5fba6eef166a28f4b6d090ef8c1a56f7 139 SUPERFAMILY SSF54593 1 136 1.34E-28 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM393_RS01275 826fc4a5ca68b7ba2808fa96c1ad4031 673 Pfam PF00593 TonB dependent receptor 223 669 3.6E-48 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM393_RS01275 826fc4a5ca68b7ba2808fa96c1ad4031 673 Pfam PF07715 TonB-dependent Receptor Plug Domain 48 149 6.6E-14 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM393_RS01275 826fc4a5ca68b7ba2808fa96c1ad4031 673 Gene3D G3DSA:2.170.130.10 20 161 1.5E-20 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM393_RS01275 826fc4a5ca68b7ba2808fa96c1ad4031 673 SUPERFAMILY SSF56935 19 672 1.28E-93 T 28-03-2018 AM393_RS01275 826fc4a5ca68b7ba2808fa96c1ad4031 673 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 50 672 1.8E-148 T 28-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AM393_RS01275 826fc4a5ca68b7ba2808fa96c1ad4031 673 Gene3D G3DSA:2.40.170.20 163 672 8.8E-59 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM393_RS19165 b5d4bc9cd730f8c06823a98bbb6da851 712 Pfam PF00270 DEAD/DEAH box helicase 31 94 1.7E-5 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AM393_RS19165 b5d4bc9cd730f8c06823a98bbb6da851 712 SMART SM00488 18 294 0.0044 T 28-03-2018 IPR006554 Helicase-like, DEXD box c2 type GO:0004003|GO:0016818 AM393_RS19165 b5d4bc9cd730f8c06823a98bbb6da851 712 SMART SM00487 23 307 2.9E-5 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AM393_RS19165 b5d4bc9cd730f8c06823a98bbb6da851 712 SMART SM00491 534 666 1.4E-38 T 28-03-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 AM393_RS19165 b5d4bc9cd730f8c06823a98bbb6da851 712 Gene3D G3DSA:3.40.50.300 24 473 1.6E-27 T 28-03-2018 AM393_RS19165 b5d4bc9cd730f8c06823a98bbb6da851 712 Pfam PF13307 Helicase C-terminal domain 522 678 4.2E-25 T 28-03-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 AM393_RS19165 b5d4bc9cd730f8c06823a98bbb6da851 712 Gene3D G3DSA:3.40.50.300 494 669 4.1E-4 T 28-03-2018 AM393_RS19165 b5d4bc9cd730f8c06823a98bbb6da851 712 Pfam PF06733 DEAD_2 197 264 9.5E-8 T 28-03-2018 IPR010614 DEAD2 GO:0003677|GO:0004003|GO:0005524 AM393_RS19165 b5d4bc9cd730f8c06823a98bbb6da851 712 SUPERFAMILY SSF52540 199 271 5.04E-17 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS19165 b5d4bc9cd730f8c06823a98bbb6da851 712 SUPERFAMILY SSF52540 46 97 5.04E-17 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS19165 b5d4bc9cd730f8c06823a98bbb6da851 712 SUPERFAMILY SSF52540 441 455 5.04E-17 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS19165 b5d4bc9cd730f8c06823a98bbb6da851 712 SUPERFAMILY SSF52540 490 660 5.04E-17 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS27045 dba4ca0e68f9ac0d2081271153a823fc 123 Pfam PF05509 TraY domain 11 54 2.9E-18 T 28-03-2018 IPR008876 Relaxosome protein TraY GO:0000746|GO:0003677 AM393_RS27045 dba4ca0e68f9ac0d2081271153a823fc 123 Pfam PF05509 TraY domain 67 114 1.1E-20 T 28-03-2018 IPR008876 Relaxosome protein TraY GO:0000746|GO:0003677 AM393_RS27045 dba4ca0e68f9ac0d2081271153a823fc 123 Gene3D G3DSA:1.10.1220.10 1 39 0.23 T 28-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 AM393_RS24140 268ac609056a607032dd2c772aabcb1e 142 SUPERFAMILY SSF74653 58 142 4.19E-17 T 28-03-2018 AM393_RS24140 268ac609056a607032dd2c772aabcb1e 142 Gene3D G3DSA:3.30.1150.10 46 142 1.3E-16 T 28-03-2018 AM393_RS24140 268ac609056a607032dd2c772aabcb1e 142 Pfam PF06519 TolA C-terminal 54 140 3.3E-15 T 28-03-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 AM393_RS15885 edbaddf5e5150803faecf09376e32255 289 SUPERFAMILY SSF103481 210 283 6.67E-10 T 28-03-2018 AM393_RS15885 edbaddf5e5150803faecf09376e32255 289 Pfam PF00892 EamA-like transporter family 150 281 5.1E-13 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM393_RS15885 edbaddf5e5150803faecf09376e32255 289 Pfam PF00892 EamA-like transporter family 15 138 3.5E-10 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM393_RS15885 edbaddf5e5150803faecf09376e32255 289 SUPERFAMILY SSF103481 43 141 8.89E-9 T 28-03-2018 AM393_RS15885 edbaddf5e5150803faecf09376e32255 289 Gene3D G3DSA:1.10.287.70 148 287 0.25 T 28-03-2018 AM393_RS02515 c60ed94cd5ceb9609d05947f5ff83cbd 376 Pfam PF00268 Ribonucleotide reductase, small chain 32 332 9.3E-50 T 28-03-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM393_RS02515 c60ed94cd5ceb9609d05947f5ff83cbd 376 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 115 131 - T 28-03-2018 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM393_RS02515 c60ed94cd5ceb9609d05947f5ff83cbd 376 Gene3D G3DSA:1.10.620.20 1 346 4.2E-116 T 28-03-2018 AM393_RS02515 c60ed94cd5ceb9609d05947f5ff83cbd 376 SUPERFAMILY SSF47240 3 340 1.31E-115 T 28-03-2018 IPR009078 Ferritin-like superfamily AM393_RS21275 2e974eaa21e26b2b0f27a32866d42e9f 114 Gene3D G3DSA:3.40.1800.10 6 86 1.0E-7 T 28-03-2018 AM393_RS21275 2e974eaa21e26b2b0f27a32866d42e9f 114 Pfam PF01844 HNH endonuclease 27 75 9.7E-12 T 28-03-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 AM393_RS21275 2e974eaa21e26b2b0f27a32866d42e9f 114 SMART SM00507 15 70 1.4E-5 T 28-03-2018 IPR003615 HNH nuclease AM393_RS18150 09364d0151f69a2f52aaa328b3db3205 498 PIRSF PIRSF000538 1 484 6.4E-97 T 28-03-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AM393_RS18150 09364d0151f69a2f52aaa328b3db3205 498 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 249 2.3E-52 T 28-03-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 AM393_RS18150 09364d0151f69a2f52aaa328b3db3205 498 SUPERFAMILY SSF53067 1 249 7.96E-57 T 28-03-2018 AM393_RS18150 09364d0151f69a2f52aaa328b3db3205 498 Gene3D G3DSA:3.30.420.40 1 246 2.5E-59 T 28-03-2018 AM393_RS18150 09364d0151f69a2f52aaa328b3db3205 498 SUPERFAMILY SSF53067 251 481 3.61E-47 T 28-03-2018 AM393_RS18150 09364d0151f69a2f52aaa328b3db3205 498 Gene3D G3DSA:3.30.420.40 247 492 7.2E-51 T 28-03-2018 AM393_RS18150 09364d0151f69a2f52aaa328b3db3205 498 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 259 439 1.9E-28 T 28-03-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 AM393_RS02960 1dacefead59e60a04eaba5bdbac13104 160 SUPERFAMILY SSF51182 25 121 1.39E-14 T 28-03-2018 IPR011051 RmlC-like cupin domain AM393_RS02960 1dacefead59e60a04eaba5bdbac13104 160 Gene3D G3DSA:2.60.120.10 5 136 2.1E-13 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AM393_RS02960 1dacefead59e60a04eaba5bdbac13104 160 TIGRFAM TIGR04366 cupin_WbuC: cupin fold metalloprotein, WbuC family 4 132 4.6E-43 T 28-03-2018 IPR027565 Cupin fold metalloprotein, WbuC family AM393_RS14740 296d7f01afbbddff8cd0e9202693fb4a 287 Gene3D G3DSA:3.40.50.10860 1 119 4.7E-44 T 28-03-2018 AM393_RS14740 296d7f01afbbddff8cd0e9202693fb4a 287 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 14 96 9.0E-30 T 28-03-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 AM393_RS14740 296d7f01afbbddff8cd0e9202693fb4a 287 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 11 284 1.3E-65 T 28-03-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 AM393_RS14740 296d7f01afbbddff8cd0e9202693fb4a 287 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 9 287 32.316 T 28-03-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 AM393_RS14740 296d7f01afbbddff8cd0e9202693fb4a 287 Gene3D G3DSA:3.40.50.720 120 286 1.4E-30 T 28-03-2018 AM393_RS14740 296d7f01afbbddff8cd0e9202693fb4a 287 SUPERFAMILY SSF51735 109 286 9.27E-37 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS14740 296d7f01afbbddff8cd0e9202693fb4a 287 SUPERFAMILY SSF53223 4 108 5.76E-34 T 28-03-2018 AM393_RS11525 9b2067cdaff650ec6eb522bf994e37d5 201 Gene3D G3DSA:3.30.1050.10 15 125 6.2E-6 T 28-03-2018 IPR003033 SCP2 sterol-binding domain AM393_RS11525 9b2067cdaff650ec6eb522bf994e37d5 201 Pfam PF02036 SCP-2 sterol transfer family 15 112 9.8E-21 T 28-03-2018 IPR003033 SCP2 sterol-binding domain AM393_RS11525 9b2067cdaff650ec6eb522bf994e37d5 201 SUPERFAMILY SSF55718 11 113 1.29E-8 T 28-03-2018 IPR003033 SCP2 sterol-binding domain AM393_RS16605 e58c93d36a3456e7231bccc23872856e 90 Pfam PF02583 Metal-sensitive transcriptional repressor 8 86 6.9E-22 T 28-03-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 AM393_RS23960 95422a3a8ef8b3d16b6845ff017d46da 501 SUPERFAMILY SSF53067 5 252 5.18E-74 T 28-03-2018 AM393_RS23960 95422a3a8ef8b3d16b6845ff017d46da 501 SUPERFAMILY SSF53067 251 486 6.87E-45 T 28-03-2018 AM393_RS23960 95422a3a8ef8b3d16b6845ff017d46da 501 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 5 249 1.6E-62 T 28-03-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 AM393_RS23960 95422a3a8ef8b3d16b6845ff017d46da 501 Gene3D G3DSA:3.30.420.40 247 498 1.2E-46 T 28-03-2018 AM393_RS23960 95422a3a8ef8b3d16b6845ff017d46da 501 PIRSF PIRSF000538 2 495 3.3E-124 T 28-03-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AM393_RS23960 95422a3a8ef8b3d16b6845ff017d46da 501 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 261 441 5.9E-24 T 28-03-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 AM393_RS23960 95422a3a8ef8b3d16b6845ff017d46da 501 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 354 374 - T 28-03-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AM393_RS23960 95422a3a8ef8b3d16b6845ff017d46da 501 Gene3D G3DSA:3.30.420.40 1 246 1.1E-76 T 28-03-2018 AM393_RS22925 382cbec28cce89c62f2b7bafcf49d40b 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 7.0E-12 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS22925 382cbec28cce89c62f2b7bafcf49d40b 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 7.0E-12 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS22925 382cbec28cce89c62f2b7bafcf49d40b 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 7.0E-12 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS22925 382cbec28cce89c62f2b7bafcf49d40b 240 SUPERFAMILY SSF51735 9 237 1.58E-39 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS22925 382cbec28cce89c62f2b7bafcf49d40b 240 Gene3D G3DSA:3.40.50.720 6 240 2.4E-39 T 28-03-2018 AM393_RS22925 382cbec28cce89c62f2b7bafcf49d40b 240 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 236 1.7E-25 T 28-03-2018 AM393_RS22925 382cbec28cce89c62f2b7bafcf49d40b 240 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM393_RS25455 d907ff029c391b3c2361231384733c05 107 SUPERFAMILY SSF141488 26 103 4.05E-23 T 28-03-2018 IPR018660 C-type lysozyme inhibitor AM393_RS25455 d907ff029c391b3c2361231384733c05 107 Pfam PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme 33 94 1.1E-16 T 28-03-2018 IPR018660 C-type lysozyme inhibitor AM393_RS16440 7be31084ed4fc7a66d4a5bb7ec892850 314 SUPERFAMILY SSF49503 122 282 1.0E-52 T 28-03-2018 IPR008972 Cupredoxin AM393_RS16440 7be31084ed4fc7a66d4a5bb7ec892850 314 SUPERFAMILY SSF81464 29 116 2.94E-23 T 28-03-2018 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM393_RS16440 7be31084ed4fc7a66d4a5bb7ec892850 314 PIRSF PIRSF000292 1 312 6.6E-131 T 28-03-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 AM393_RS16440 7be31084ed4fc7a66d4a5bb7ec892850 314 TIGRFAM TIGR01433 CyoA: ubiquinol oxidase, subunit II 14 239 1.8E-121 T 28-03-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 AM393_RS16440 7be31084ed4fc7a66d4a5bb7ec892850 314 Gene3D G3DSA:1.10.287.90 28 113 1.6E-19 T 28-03-2018 AM393_RS16440 7be31084ed4fc7a66d4a5bb7ec892850 314 Pfam PF06481 COX Aromatic Rich Motif 239 284 2.2E-17 T 28-03-2018 IPR010514 COX aromatic rich motif GO:0008827|GO:0016021|GO:0022900|GO:0055114 AM393_RS16440 7be31084ed4fc7a66d4a5bb7ec892850 314 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 149 218 1.5E-5 T 28-03-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM393_RS16440 7be31084ed4fc7a66d4a5bb7ec892850 314 Gene3D G3DSA:2.60.40.420 114 281 2.5E-52 T 28-03-2018 IPR008972 Cupredoxin AM393_RS25105 2c512c67a4f07191b2bc0294ca216412 311 Hamap MF_01431 Pyrimidine-specific ribonucleoside hydrolase RihA [rihA]. 1 311 75.262 T 28-03-2018 IPR022975 Pyrimidine-specific ribonucleoside hydrolase RihA GO:0005737|GO:0006206|GO:0008152|GO:0015949|GO:0016787|GO:0016798|GO:0045437 AM393_RS25105 2c512c67a4f07191b2bc0294ca216412 311 ProSitePatterns PS01247 Inosine-uridine preferring nucleoside hydrolase family signature. 8 18 - T 28-03-2018 IPR015910 Inosine/uridine-preferring nucleoside hydrolase, conserved site GO:0016799 AM393_RS25105 2c512c67a4f07191b2bc0294ca216412 311 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 4 301 4.3E-90 T 28-03-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain AM393_RS25105 2c512c67a4f07191b2bc0294ca216412 311 SUPERFAMILY SSF53590 4 307 5.1E-105 T 28-03-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain AM393_RS25105 2c512c67a4f07191b2bc0294ca216412 311 Gene3D G3DSA:3.90.245.10 2 311 3.3E-114 T 28-03-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain AM393_RS08255 3c0092e4eb02d84862b8ea4f43debefc 130 Pfam PF00410 Ribosomal protein S8 5 129 2.6E-49 T 28-03-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM393_RS08255 3c0092e4eb02d84862b8ea4f43debefc 130 SUPERFAMILY SSF56047 5 129 2.35E-46 T 28-03-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM393_RS08255 3c0092e4eb02d84862b8ea4f43debefc 130 Gene3D G3DSA:3.30.1370.30 1 66 2.5E-25 T 28-03-2018 AM393_RS08255 3c0092e4eb02d84862b8ea4f43debefc 130 ProSitePatterns PS00053 Ribosomal protein S8 signature. 100 117 - T 28-03-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM393_RS08255 3c0092e4eb02d84862b8ea4f43debefc 130 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 130 31.959 T 28-03-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM393_RS08255 3c0092e4eb02d84862b8ea4f43debefc 130 Gene3D G3DSA:3.30.1490.10 74 129 1.3E-22 T 28-03-2018 AM393_RS16335 3cb227a0a9cbabc66bcfc5abf8b680e5 299 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 215 227 - T 28-03-2018 IPR033749 Polyprenyl synthetase, conserved site AM393_RS16335 3cb227a0a9cbabc66bcfc5abf8b680e5 299 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 97 - T 28-03-2018 IPR033749 Polyprenyl synthetase, conserved site AM393_RS16335 3cb227a0a9cbabc66bcfc5abf8b680e5 299 Pfam PF00348 Polyprenyl synthetase 32 268 2.0E-57 T 28-03-2018 IPR000092 Polyprenyl synthetase GO:0008299 AM393_RS16335 3cb227a0a9cbabc66bcfc5abf8b680e5 299 SUPERFAMILY SSF48576 1 279 3.29E-87 T 28-03-2018 IPR008949 Isoprenoid synthase domain AM393_RS16335 3cb227a0a9cbabc66bcfc5abf8b680e5 299 Gene3D G3DSA:1.10.600.10 264 299 2.5E-4 T 28-03-2018 IPR008949 Isoprenoid synthase domain AM393_RS16335 3cb227a0a9cbabc66bcfc5abf8b680e5 299 Gene3D G3DSA:1.10.600.10 1 263 4.4E-84 T 28-03-2018 IPR008949 Isoprenoid synthase domain AM393_RS18375 4a1f8830004d9977a8ac992fe8eb3c71 241 Pfam PF00005 ABC transporter 17 165 4.4E-33 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS18375 4a1f8830004d9977a8ac992fe8eb3c71 241 SUPERFAMILY SSF52540 1 235 5.32E-77 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS18375 4a1f8830004d9977a8ac992fe8eb3c71 241 PIRSF PIRSF039085 1 241 5.9E-105 T 28-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 AM393_RS18375 4a1f8830004d9977a8ac992fe8eb3c71 241 Gene3D G3DSA:3.40.50.300 1 241 1.1E-70 T 28-03-2018 AM393_RS18375 4a1f8830004d9977a8ac992fe8eb3c71 241 SMART SM00382 26 213 9.7E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS18375 4a1f8830004d9977a8ac992fe8eb3c71 241 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS10155 e52473ece2a701b2336edeb7ab70e472 269 TIGRFAM TIGR01422 phosphonatase: phosphonoacetaldehyde hydrolase 3 257 3.2E-114 T 28-03-2018 IPR006323 Phosphonoacetaldehyde hydrolase GO:0019700|GO:0050194 KEGG: 00440+3.11.1.1 AM393_RS10155 e52473ece2a701b2336edeb7ab70e472 269 Gene3D G3DSA:3.40.50.1000 89 258 2.9E-20 T 28-03-2018 IPR023214 HAD-like domain AM393_RS10155 e52473ece2a701b2336edeb7ab70e472 269 Hamap MF_01375 Phosphonoacetaldehyde hydrolase [phnX]. 1 269 139.507 T 28-03-2018 IPR006323 Phosphonoacetaldehyde hydrolase GO:0019700|GO:0050194 KEGG: 00440+3.11.1.1 AM393_RS10155 e52473ece2a701b2336edeb7ab70e472 269 SUPERFAMILY SSF56784 4 259 1.54E-52 T 28-03-2018 IPR023214 HAD-like domain AM393_RS10155 e52473ece2a701b2336edeb7ab70e472 269 Gene3D G3DSA:1.10.150.240 22 88 1.3E-32 T 28-03-2018 IPR023198 Phosphoglycolate phosphatase, domain 2 AM393_RS10155 e52473ece2a701b2336edeb7ab70e472 269 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 34 203 5.6E-14 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM393_RS20050 fed00b5623746082a4177b4277cefcc7 1482 Pfam PF04310 MukB N-terminal 2 227 4.0E-123 T 28-03-2018 IPR007406 MukB, N-terminal domain GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 AM393_RS20050 fed00b5623746082a4177b4277cefcc7 1482 Gene3D G3DSA:1.20.120.330 824 969 0.0019 T 28-03-2018 AM393_RS20050 fed00b5623746082a4177b4277cefcc7 1482 Gene3D G3DSA:1.20.120.330 331 484 0.0016 T 28-03-2018 AM393_RS20050 fed00b5623746082a4177b4277cefcc7 1482 Gene3D G3DSA:3.40.50.300 1153 1436 1.5E-5 T 28-03-2018 AM393_RS20050 fed00b5623746082a4177b4277cefcc7 1482 Pfam PF16330 MukB hinge domain 645 810 1.1E-75 T 28-03-2018 IPR032520 MukB, hinge domain AM393_RS20050 fed00b5623746082a4177b4277cefcc7 1482 Gene3D G3DSA:1.10.287.620 982 1119 6.6E-8 T 28-03-2018 AM393_RS20050 fed00b5623746082a4177b4277cefcc7 1482 Gene3D G3DSA:1.20.5.320 504 627 8.7E-4 T 28-03-2018 AM393_RS20050 fed00b5623746082a4177b4277cefcc7 1482 Gene3D G3DSA:1.20.5.170 628 821 0.056 T 28-03-2018 AM393_RS20050 fed00b5623746082a4177b4277cefcc7 1482 Hamap MF_01800 Chromosome partition protein MukB [mukB]. 1 1471 11.248 T 28-03-2018 IPR012090 Chromosome partition protein MukB GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 AM393_RS20050 fed00b5623746082a4177b4277cefcc7 1482 PIRSF PIRSF005246 1 1482 0.0 T 28-03-2018 IPR012090 Chromosome partition protein MukB GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 AM393_RS20050 fed00b5623746082a4177b4277cefcc7 1482 SUPERFAMILY SSF52540 1268 1433 3.19E-6 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS20050 fed00b5623746082a4177b4277cefcc7 1482 SUPERFAMILY SSF52540 21 55 3.19E-6 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS20050 fed00b5623746082a4177b4277cefcc7 1482 Gene3D G3DSA:3.40.1140.10 1 227 2.2E-11 T 28-03-2018 AM393_RS20050 fed00b5623746082a4177b4277cefcc7 1482 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1336 1424 8.1E-15 T 28-03-2018 AM393_RS20050 fed00b5623746082a4177b4277cefcc7 1482 SUPERFAMILY SSF52540 22 224 3.45E-22 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS07080 76e507859f6067b6ab0d5458217a955d 549 Pfam PF02733 Dak1 domain 32 324 6.8E-97 T 28-03-2018 IPR004006 DhaK domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 AM393_RS07080 76e507859f6067b6ab0d5458217a955d 549 SUPERFAMILY SSF101473 357 548 1.44E-50 T 28-03-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 AM393_RS07080 76e507859f6067b6ab0d5458217a955d 549 TIGRFAM TIGR02361 dak_ATP: dihydroxyacetone kinase 3 547 5.1E-181 T 28-03-2018 IPR012734 Dihydroxyacetone kinase GO:0004371|GO:0005524|GO:0006071 KEGG: 00051+2.7.1.28|KEGG: 00561+2.7.1.29|KEGG: 00680+2.7.1.29|MetaCyc: PWY-6131|Reactome: R-HSA-168928|Reactome: R-HSA-70350 AM393_RS07080 76e507859f6067b6ab0d5458217a955d 549 SUPERFAMILY SSF82549 2 330 5.23E-103 T 28-03-2018 AM393_RS07080 76e507859f6067b6ab0d5458217a955d 549 Gene3D G3DSA:3.40.50.10440 12 185 6.5E-67 T 28-03-2018 AM393_RS07080 76e507859f6067b6ab0d5458217a955d 549 Gene3D G3DSA:3.30.1180.20 186 331 3.0E-33 T 28-03-2018 AM393_RS07080 76e507859f6067b6ab0d5458217a955d 549 Pfam PF02734 DAK2 domain 382 547 3.2E-39 T 28-03-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 AM393_RS07080 76e507859f6067b6ab0d5458217a955d 549 SMART SM01120 382 548 1.1E-51 T 28-03-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 AM393_RS12230 d3d26a034990b49e304753ee7c07bfd7 534 Pfam PF00563 EAL domain 273 505 4.2E-63 T 28-03-2018 IPR001633 EAL domain AM393_RS12230 d3d26a034990b49e304753ee7c07bfd7 534 SMART SM00052 267 511 6.9E-103 T 28-03-2018 IPR001633 EAL domain AM393_RS12230 d3d26a034990b49e304753ee7c07bfd7 534 Pfam PF12792 CSS motif domain associated with EAL 40 242 6.0E-39 T 28-03-2018 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain AM393_RS12230 d3d26a034990b49e304753ee7c07bfd7 534 SUPERFAMILY SSF141868 273 519 9.55E-75 T 28-03-2018 IPR001633 EAL domain AM393_RS12230 d3d26a034990b49e304753ee7c07bfd7 534 Gene3D G3DSA:3.20.20.450 270 524 2.8E-79 T 28-03-2018 IPR001633 EAL domain AM393_RS17675 7c33419d0ab9167c67cb37218c23c28e 285 SMART SM00530 21 93 5.9E-5 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM393_RS17675 7c33419d0ab9167c67cb37218c23c28e 285 Gene3D G3DSA:3.30.450.20 115 268 0.0016 T 28-03-2018 AM393_RS17675 7c33419d0ab9167c67cb37218c23c28e 285 Pfam PF13560 Helix-turn-helix domain 17 96 1.0E-15 T 28-03-2018 AM393_RS17675 7c33419d0ab9167c67cb37218c23c28e 285 SUPERFAMILY SSF47413 16 90 1.13E-6 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM393_RS17675 7c33419d0ab9167c67cb37218c23c28e 285 Gene3D G3DSA:1.10.260.40 11 97 1.5E-14 T 28-03-2018 AM393_RS03110 15a83b884423bb03515b0e45651214fe 352 TIGRFAM TIGR02205 septum_zipA: cell division protein ZipA 130 344 6.6E-72 T 28-03-2018 IPR011919 Cell division protein ZipA GO:0007049|GO:0016021|GO:0090529 AM393_RS03110 15a83b884423bb03515b0e45651214fe 352 Gene3D G3DSA:3.30.1400.10 215 347 3.1E-55 T 28-03-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 AM393_RS03110 15a83b884423bb03515b0e45651214fe 352 Hamap MF_00509 Cell division protein ZipA [zipA]. 2 346 25.082 T 28-03-2018 IPR011919 Cell division protein ZipA GO:0007049|GO:0016021|GO:0090529 AM393_RS03110 15a83b884423bb03515b0e45651214fe 352 SUPERFAMILY SSF64383 215 349 2.22E-49 T 28-03-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 AM393_RS03110 15a83b884423bb03515b0e45651214fe 352 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 217 343 6.3E-50 T 28-03-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 AM393_RS03110 15a83b884423bb03515b0e45651214fe 352 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 216 352 6.0E-66 T 28-03-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 AM393_RS03110 15a83b884423bb03515b0e45651214fe 352 SMART SM00771 214 344 8.7E-77 T 28-03-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 AM393_RS06030 be4c6688593f17f8edde15110f6db9c9 252 Gene3D G3DSA:3.30.2010.10 56 147 1.0E-20 T 28-03-2018 AM393_RS06030 be4c6688593f17f8edde15110f6db9c9 252 Pfam PF01435 Peptidase family M48 72 245 6.2E-26 T 28-03-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 AM393_RS04710 428bcd5eca2cc54cba3566720a7dae1b 787 Gene3D G3DSA:2.170.130.10 57 194 3.0E-13 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM393_RS04710 428bcd5eca2cc54cba3566720a7dae1b 787 Gene3D G3DSA:2.40.170.20 195 787 8.4E-71 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM393_RS04710 428bcd5eca2cc54cba3566720a7dae1b 787 SUPERFAMILY SSF56935 43 787 3.36E-86 T 28-03-2018 AM393_RS04710 428bcd5eca2cc54cba3566720a7dae1b 787 Pfam PF07715 TonB-dependent Receptor Plug Domain 60 182 2.7E-10 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM393_RS04710 428bcd5eca2cc54cba3566720a7dae1b 787 Pfam PF00593 TonB dependent receptor 357 785 2.0E-39 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM393_RS07385 fadbb9ea3c2b203b69c41f537a2620d4 196 Pfam PF13580 SIS domain 9 144 3.5E-33 T 28-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AM393_RS07385 fadbb9ea3c2b203b69c41f537a2620d4 196 Hamap MF_01157 DnaA initiator-associating protein DiaA [diaA]. 1 196 61.911 T 28-03-2018 IPR023070 DnaA initiator-associating protein AM393_RS07385 fadbb9ea3c2b203b69c41f537a2620d4 196 SUPERFAMILY SSF53697 2 191 3.44E-52 T 28-03-2018 AM393_RS07385 fadbb9ea3c2b203b69c41f537a2620d4 196 Gene3D G3DSA:3.40.50.10490 1 196 5.5E-38 T 28-03-2018 AM393_RS27540 c5093c8d69a75dc2bbb730fb78bfce03 429 Pfam PF02040 Arsenical pump membrane protein 3 423 1.1E-158 T 28-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 AM393_RS27540 c5093c8d69a75dc2bbb730fb78bfce03 429 TIGRFAM TIGR00935 2a45: arsenite/antimonite efflux pump membrane protein 3 426 4.2E-218 T 28-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 AM393_RS27540 c5093c8d69a75dc2bbb730fb78bfce03 429 PRINTS PR00758 Arsenical pump membrane protein signature 101 125 4.2E-123 T 28-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 AM393_RS27540 c5093c8d69a75dc2bbb730fb78bfce03 429 PRINTS PR00758 Arsenical pump membrane protein signature 364 389 4.2E-123 T 28-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 AM393_RS27540 c5093c8d69a75dc2bbb730fb78bfce03 429 PRINTS PR00758 Arsenical pump membrane protein signature 323 345 4.2E-123 T 28-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 AM393_RS27540 c5093c8d69a75dc2bbb730fb78bfce03 429 PRINTS PR00758 Arsenical pump membrane protein signature 144 168 4.2E-123 T 28-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 AM393_RS27540 c5093c8d69a75dc2bbb730fb78bfce03 429 PRINTS PR00758 Arsenical pump membrane protein signature 278 302 4.2E-123 T 28-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 AM393_RS27540 c5093c8d69a75dc2bbb730fb78bfce03 429 PRINTS PR00758 Arsenical pump membrane protein signature 217 242 4.2E-123 T 28-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 AM393_RS27540 c5093c8d69a75dc2bbb730fb78bfce03 429 PRINTS PR00758 Arsenical pump membrane protein signature 397 421 4.2E-123 T 28-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 AM393_RS27540 c5093c8d69a75dc2bbb730fb78bfce03 429 PRINTS PR00758 Arsenical pump membrane protein signature 177 200 4.2E-123 T 28-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 AM393_RS19100 f54114550edea7bfeee789ca0aa9779a 253 SUPERFAMILY SSF56219 8 251 1.44E-51 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase AM393_RS19100 f54114550edea7bfeee789ca0aa9779a 253 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 33 244 1.4E-15 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase AM393_RS19100 f54114550edea7bfeee789ca0aa9779a 253 Gene3D G3DSA:3.60.10.10 5 253 1.3E-33 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase AM393_RS17620 4a94597ac91f8abc2fa142bed62799d4 211 Gene3D G3DSA:1.10.10.10 147 203 8.4E-6 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS17620 4a94597ac91f8abc2fa142bed62799d4 211 ProSitePatterns PS00622 LuxR-type HTH domain signature. 164 191 - T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS17620 4a94597ac91f8abc2fa142bed62799d4 211 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 196 1.4E-5 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS17620 4a94597ac91f8abc2fa142bed62799d4 211 ProDom PD116027 TRANSCRIPTION DNA-BINDING REGULATION RMBA YQEH ORF3-QACEDELTA1 FUSION CYTOPLASMIC ECS3703 TRANSMEMBRANE 1 182 2.0E-21 T 28-03-2018 AM393_RS17620 4a94597ac91f8abc2fa142bed62799d4 211 SUPERFAMILY SSF46894 136 198 1.02E-8 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM393_RS11910 b4f774a2db87072bde119593db9f582c 414 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 32 103 1.5E-6 T 28-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AM393_RS11910 b4f774a2db87072bde119593db9f582c 414 Gene3D G3DSA:3.90.180.10 3 190 4.4E-23 T 28-03-2018 AM393_RS11910 b4f774a2db87072bde119593db9f582c 414 Pfam PF00107 Zinc-binding dehydrogenase 192 329 2.8E-10 T 28-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AM393_RS11910 b4f774a2db87072bde119593db9f582c 414 Gene3D G3DSA:3.40.50.720 191 342 1.3E-4 T 28-03-2018 AM393_RS11910 b4f774a2db87072bde119593db9f582c 414 SUPERFAMILY SSF50129 6 194 2.83E-25 T 28-03-2018 IPR011032 GroES-like AM393_RS11910 b4f774a2db87072bde119593db9f582c 414 SUPERFAMILY SSF51735 174 335 2.73E-14 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS09000 fc3ba3963d9234fe501967f4c29321c3 379 Gene3D G3DSA:3.40.640.10 3 245 4.2E-50 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM393_RS09000 fc3ba3963d9234fe501967f4c29321c3 379 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 13 374 7.8E-133 T 28-03-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase AM393_RS09000 fc3ba3963d9234fe501967f4c29321c3 379 Hamap MF_01167 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase [arnB]. 1 379 73.045 T 28-03-2018 IPR022850 UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase, ArnB GO:0008483 KEGG: 00520+2.6.1.87 AM393_RS09000 fc3ba3963d9234fe501967f4c29321c3 379 SUPERFAMILY SSF53383 4 376 2.29E-115 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM393_RS09000 fc3ba3963d9234fe501967f4c29321c3 379 Gene3D G3DSA:3.90.1150.10 246 378 1.6E-38 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM393_RS09000 fc3ba3963d9234fe501967f4c29321c3 379 PIRSF PIRSF000390 1 379 7.6E-113 T 28-03-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase AM393_RS00170 c61761a41c3ba696a2e9b549357bf9c4 304 Gene3D G3DSA:1.10.3470.10 1 293 4.2E-54 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AM393_RS00170 c61761a41c3ba696a2e9b549357bf9c4 304 Pfam PF02653 Branched-chain amino acid transport system / permease component 9 288 5.6E-53 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AM393_RS22820 cf76bd80d2a6ee74f8090b4ee5e3ac29 332 SUPERFAMILY SSF51735 3 166 3.0E-58 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS22820 cf76bd80d2a6ee74f8090b4ee5e3ac29 332 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 102 1.1E-34 T 28-03-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM393_RS22820 cf76bd80d2a6ee74f8090b4ee5e3ac29 332 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 3 325 2.9E-132 T 28-03-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM393_RS22820 cf76bd80d2a6ee74f8090b4ee5e3ac29 332 Gene3D G3DSA:3.40.50.720 1 159 4.8E-70 T 28-03-2018 AM393_RS22820 cf76bd80d2a6ee74f8090b4ee5e3ac29 332 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 144 162 3.8E-33 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM393_RS22820 cf76bd80d2a6ee74f8090b4ee5e3ac29 332 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 266 281 3.8E-33 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM393_RS22820 cf76bd80d2a6ee74f8090b4ee5e3ac29 332 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 109 122 3.8E-33 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM393_RS22820 cf76bd80d2a6ee74f8090b4ee5e3ac29 332 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 228 245 3.8E-33 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM393_RS22820 cf76bd80d2a6ee74f8090b4ee5e3ac29 332 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 171 187 3.8E-33 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM393_RS22820 cf76bd80d2a6ee74f8090b4ee5e3ac29 332 PIRSF PIRSF000149 1 332 6.8E-119 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM393_RS22820 cf76bd80d2a6ee74f8090b4ee5e3ac29 332 Gene3D G3DSA:3.30.360.10 160 315 4.5E-60 T 28-03-2018 AM393_RS22820 cf76bd80d2a6ee74f8090b4ee5e3ac29 332 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 155 313 8.6E-60 T 28-03-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM393_RS22820 cf76bd80d2a6ee74f8090b4ee5e3ac29 332 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 148 155 - T 28-03-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM393_RS22820 cf76bd80d2a6ee74f8090b4ee5e3ac29 332 SUPERFAMILY SSF55347 149 313 2.86E-61 T 28-03-2018 AM393_RS22820 cf76bd80d2a6ee74f8090b4ee5e3ac29 332 SMART SM00846 2 150 1.1E-80 T 28-03-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM393_RS15405 da918230b97e8e0d57436f0a45b5e83a 717 PIRSF PIRSF009393 1 712 2.6E-278 T 28-03-2018 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 AM393_RS15405 da918230b97e8e0d57436f0a45b5e83a 717 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 15 124 1.1E-26 T 28-03-2018 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 AM393_RS15405 da918230b97e8e0d57436f0a45b5e83a 717 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 362 376 - T 28-03-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 AM393_RS15405 da918230b97e8e0d57436f0a45b5e83a 717 Gene3D G3DSA:3.40.640.10 130 424 6.8E-30 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM393_RS15405 da918230b97e8e0d57436f0a45b5e83a 717 Gene3D G3DSA:3.90.100.10 595 715 1.4E-37 T 28-03-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 AM393_RS15405 da918230b97e8e0d57436f0a45b5e83a 717 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 130 544 5.4E-191 T 28-03-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 AM393_RS15405 da918230b97e8e0d57436f0a45b5e83a 717 Gene3D G3DSA:3.90.1150.10 425 594 1.6E-54 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM393_RS15405 da918230b97e8e0d57436f0a45b5e83a 717 SUPERFAMILY SSF53383 130 562 3.59E-101 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM393_RS15405 da918230b97e8e0d57436f0a45b5e83a 717 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 570 700 1.3E-46 T 28-03-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 AM393_RS15405 da918230b97e8e0d57436f0a45b5e83a 717 SUPERFAMILY SSF55904 567 708 2.09E-43 T 28-03-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 AM393_RS00705 8cd236f334184b0f8b9be9ddfb07ad63 147 SUPERFAMILY SSF55811 3 140 2.3E-24 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 AM393_RS00705 8cd236f334184b0f8b9be9ddfb07ad63 147 Pfam PF00293 NUDIX domain 5 141 1.2E-20 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AM393_RS00705 8cd236f334184b0f8b9be9ddfb07ad63 147 Gene3D G3DSA:3.90.79.10 2 147 7.4E-29 T 28-03-2018 AM393_RS00705 8cd236f334184b0f8b9be9ddfb07ad63 147 PRINTS PR01404 DATP pyrophosphohydrolase signature 99 120 4.2E-51 T 28-03-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 AM393_RS00705 8cd236f334184b0f8b9be9ddfb07ad63 147 PRINTS PR01404 DATP pyrophosphohydrolase signature 126 139 4.2E-51 T 28-03-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 AM393_RS00705 8cd236f334184b0f8b9be9ddfb07ad63 147 PRINTS PR01404 DATP pyrophosphohydrolase signature 71 90 4.2E-51 T 28-03-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 AM393_RS00705 8cd236f334184b0f8b9be9ddfb07ad63 147 PRINTS PR01404 DATP pyrophosphohydrolase signature 3 20 4.2E-51 T 28-03-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 AM393_RS00705 8cd236f334184b0f8b9be9ddfb07ad63 147 PRINTS PR01404 DATP pyrophosphohydrolase signature 20 41 4.2E-51 T 28-03-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 AM393_RS24340 819cfd8f41c8a78bb183beb7c5143545 372 PIRSF PIRSF000148 1 372 6.6E-63 T 28-03-2018 AM393_RS24340 819cfd8f41c8a78bb183beb7c5143545 372 SMART SM00859 3 122 1.8E-26 T 28-03-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AM393_RS24340 819cfd8f41c8a78bb183beb7c5143545 372 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 144 355 3.0E-42 T 28-03-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AM393_RS24340 819cfd8f41c8a78bb183beb7c5143545 372 TIGRFAM TIGR01745 asd_gamma: aspartate-semialdehyde dehydrogenase 2 369 2.1E-153 T 28-03-2018 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AM393_RS24340 819cfd8f41c8a78bb183beb7c5143545 372 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 262 276 - T 28-03-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AM393_RS24340 819cfd8f41c8a78bb183beb7c5143545 372 SUPERFAMILY SSF55347 134 356 1.37E-58 T 28-03-2018 AM393_RS24340 819cfd8f41c8a78bb183beb7c5143545 372 Gene3D G3DSA:3.30.360.10 145 351 6.6E-48 T 28-03-2018 AM393_RS24340 819cfd8f41c8a78bb183beb7c5143545 372 SUPERFAMILY SSF51735 1 147 2.9E-45 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS24340 819cfd8f41c8a78bb183beb7c5143545 372 Gene3D G3DSA:3.40.50.720 1 144 2.6E-19 T 28-03-2018 AM393_RS24340 819cfd8f41c8a78bb183beb7c5143545 372 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 3 121 6.7E-23 T 28-03-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AM393_RS04780 af022fe6922a20c29d128766ea1d1fb0 295 Gene3D G3DSA:1.10.10.10 2 89 5.8E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS04780 af022fe6922a20c29d128766ea1d1fb0 295 SUPERFAMILY SSF53850 88 294 4.96E-43 T 28-03-2018 AM393_RS04780 af022fe6922a20c29d128766ea1d1fb0 295 SUPERFAMILY SSF46785 3 87 2.45E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS04780 af022fe6922a20c29d128766ea1d1fb0 295 Gene3D G3DSA:3.40.190.10 177 265 3.4E-21 T 28-03-2018 AM393_RS04780 af022fe6922a20c29d128766ea1d1fb0 295 Pfam PF03466 LysR substrate binding domain 88 293 5.2E-44 T 28-03-2018 IPR005119 LysR, substrate-binding AM393_RS04780 af022fe6922a20c29d128766ea1d1fb0 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 6.4E-17 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS04780 af022fe6922a20c29d128766ea1d1fb0 295 Gene3D G3DSA:3.40.190.10 90 176 1.3E-18 T 28-03-2018 AM393_RS22460 7c8a90a8fc02f85f35fb12874f3ae320 303 Gene3D G3DSA:3.40.50.720 1 240 9.6E-32 T 28-03-2018 AM393_RS22460 7c8a90a8fc02f85f35fb12874f3ae320 303 SUPERFAMILY SSF51735 5 263 3.78E-61 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS22460 7c8a90a8fc02f85f35fb12874f3ae320 303 Pfam PF05368 NmrA-like family 7 233 8.3E-50 T 28-03-2018 IPR008030 NmrA-like domain Reactome: R-HSA-70635 AM393_RS20320 f22d5f222714c44d1eaf759b86512e84 321 SUPERFAMILY SSF52343 106 223 1.27E-25 T 28-03-2018 AM393_RS20320 f22d5f222714c44d1eaf759b86512e84 321 SUPERFAMILY SSF63380 3 104 3.97E-23 T 28-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AM393_RS20320 f22d5f222714c44d1eaf759b86512e84 321 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 270 278 - T 28-03-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AM393_RS20320 f22d5f222714c44d1eaf759b86512e84 321 Gene3D G3DSA:3.40.50.80 107 229 1.4E-23 T 28-03-2018 AM393_RS20320 f22d5f222714c44d1eaf759b86512e84 321 Gene3D G3DSA:2.40.30.10 2 104 2.3E-15 T 28-03-2018 AM393_RS20320 f22d5f222714c44d1eaf759b86512e84 321 Gene3D G3DSA:3.10.20.30 230 321 7.5E-18 T 28-03-2018 IPR012675 Beta-grasp domain AM393_RS20320 f22d5f222714c44d1eaf759b86512e84 321 PRINTS PR00409 Phthalate dioxygenase reductase family signature 94 108 3.5E-29 T 28-03-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 AM393_RS20320 f22d5f222714c44d1eaf759b86512e84 321 PRINTS PR00409 Phthalate dioxygenase reductase family signature 116 135 3.5E-29 T 28-03-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 AM393_RS20320 f22d5f222714c44d1eaf759b86512e84 321 PRINTS PR00409 Phthalate dioxygenase reductase family signature 80 94 3.5E-29 T 28-03-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 AM393_RS20320 f22d5f222714c44d1eaf759b86512e84 321 PRINTS PR00409 Phthalate dioxygenase reductase family signature 193 201 3.5E-29 T 28-03-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 AM393_RS20320 f22d5f222714c44d1eaf759b86512e84 321 PRINTS PR00409 Phthalate dioxygenase reductase family signature 31 41 3.5E-29 T 28-03-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 AM393_RS20320 f22d5f222714c44d1eaf759b86512e84 321 PRINTS PR00409 Phthalate dioxygenase reductase family signature 141 150 3.5E-29 T 28-03-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 AM393_RS20320 f22d5f222714c44d1eaf759b86512e84 321 SUPERFAMILY SSF54292 216 320 6.55E-24 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AM393_RS20320 f22d5f222714c44d1eaf759b86512e84 321 Pfam PF00970 Oxidoreductase FAD-binding domain 9 103 2.0E-5 T 28-03-2018 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 AM393_RS20320 f22d5f222714c44d1eaf759b86512e84 321 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 242 312 2.4E-12 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AM393_RS24385 01bbaebc76e4b1a78f84820ac1b5e5c6 241 Pfam PF00117 Glutamine amidotransferase class-I 42 185 7.9E-15 T 28-03-2018 IPR017926 Glutamine amidotransferase AM393_RS24385 01bbaebc76e4b1a78f84820ac1b5e5c6 241 Gene3D G3DSA:3.40.50.880 1 236 1.3E-41 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AM393_RS24385 01bbaebc76e4b1a78f84820ac1b5e5c6 241 SUPERFAMILY SSF52317 14 191 1.62E-33 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AM393_RS11230 7e206ad127540e07d0fa3512b9968ada 93 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 31 51 - T 28-03-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 AM393_RS11230 7e206ad127540e07d0fa3512b9968ada 93 Gene3D G3DSA:3.10.50.40 1 93 8.6E-30 T 28-03-2018 AM393_RS11230 7e206ad127540e07d0fa3512b9968ada 93 Pfam PF13616 PPIC-type PPIASE domain 15 91 1.8E-20 T 28-03-2018 AM393_RS11230 7e206ad127540e07d0fa3512b9968ada 93 SUPERFAMILY SSF54534 5 90 4.38E-28 T 28-03-2018 AM393_RS20405 ce870a75978d28866b40c6863871d4de 149 Gene3D G3DSA:1.10.10.10 1 146 2.0E-26 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS20405 ce870a75978d28866b40c6863871d4de 149 SUPERFAMILY SSF46785 6 143 3.44E-39 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS20405 ce870a75978d28866b40c6863871d4de 149 Pfam PF01638 HxlR-like helix-turn-helix 19 104 1.9E-20 T 28-03-2018 IPR002577 Helix-turn-helix, HxlR type AM393_RS13050 767ed7490b9bc2ba595094d21171454e 318 Gene3D G3DSA:3.40.50.2300 140 301 1.3E-31 T 28-03-2018 AM393_RS13050 767ed7490b9bc2ba595094d21171454e 318 SUPERFAMILY SSF53822 23 310 2.36E-71 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AM393_RS13050 767ed7490b9bc2ba595094d21171454e 318 Pfam PF13407 Periplasmic binding protein domain 27 274 3.8E-43 T 28-03-2018 IPR025997 Periplasmic binding protein AM393_RS13050 767ed7490b9bc2ba595094d21171454e 318 Gene3D G3DSA:3.40.50.2300 22 139 1.2E-21 T 28-03-2018 AM393_RS23595 4934d3d5556a37f223422038d9d5504b 176 Gene3D G3DSA:3.40.630.30 2 176 1.9E-30 T 28-03-2018 AM393_RS23595 4934d3d5556a37f223422038d9d5504b 176 SUPERFAMILY SSF55729 6 174 5.23E-27 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM393_RS23595 4934d3d5556a37f223422038d9d5504b 176 Pfam PF13673 Acetyltransferase (GNAT) domain 56 153 2.9E-12 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AM393_RS11000 865ce454e796e73fa1db9d59ceea7ecc 70 Pfam PF01197 Ribosomal protein L31 1 64 1.5E-29 T 28-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM393_RS11000 865ce454e796e73fa1db9d59ceea7ecc 70 ProSitePatterns PS01143 Ribosomal protein L31 signature. 35 56 - T 28-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM393_RS11000 865ce454e796e73fa1db9d59ceea7ecc 70 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 68 30.922 T 28-03-2018 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM393_RS11000 865ce454e796e73fa1db9d59ceea7ecc 70 SUPERFAMILY SSF143800 1 66 7.06E-27 T 28-03-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS11000 865ce454e796e73fa1db9d59ceea7ecc 70 PRINTS PR01249 Ribosomal protein L31 signature 31 46 6.1E-22 T 28-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM393_RS11000 865ce454e796e73fa1db9d59ceea7ecc 70 PRINTS PR01249 Ribosomal protein L31 signature 2 19 6.1E-22 T 28-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM393_RS11000 865ce454e796e73fa1db9d59ceea7ecc 70 PRINTS PR01249 Ribosomal protein L31 signature 46 64 6.1E-22 T 28-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM393_RS11000 865ce454e796e73fa1db9d59ceea7ecc 70 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 65 3.7E-34 T 28-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM393_RS20275 f3bc7816200331147b2d72896a7023d5 262 Pfam PF12833 Helix-turn-helix domain 187 262 7.5E-16 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM393_RS20275 f3bc7816200331147b2d72896a7023d5 262 Gene3D G3DSA:1.10.10.60 127 203 0.0017 T 28-03-2018 AM393_RS20275 f3bc7816200331147b2d72896a7023d5 262 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 231 246 9.7E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM393_RS20275 f3bc7816200331147b2d72896a7023d5 262 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 246 262 9.7E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM393_RS20275 f3bc7816200331147b2d72896a7023d5 262 Gene3D G3DSA:1.10.10.60 215 262 1.0E-8 T 28-03-2018 AM393_RS20275 f3bc7816200331147b2d72896a7023d5 262 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 216 258 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM393_RS20275 f3bc7816200331147b2d72896a7023d5 262 SUPERFAMILY SSF46689 215 262 4.3E-9 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS20275 f3bc7816200331147b2d72896a7023d5 262 SMART SM00342 180 262 1.1E-24 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM393_RS12085 92e17cdbc70b96172a5a471a31b6da95 162 Gene3D G3DSA:2.60.120.10 8 162 3.0E-18 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AM393_RS12085 92e17cdbc70b96172a5a471a31b6da95 162 SUPERFAMILY SSF51182 4 158 1.9E-24 T 28-03-2018 IPR011051 RmlC-like cupin domain AM393_RS12085 92e17cdbc70b96172a5a471a31b6da95 162 Pfam PF07883 Cupin domain 47 118 9.0E-18 T 28-03-2018 IPR013096 Cupin 2, conserved barrel AM393_RS17060 43e02eb7c1ba043d6f5f74b29fb65723 176 Pfam PF00847 AP2 domain 113 161 5.7E-6 T 28-03-2018 IPR001471 AP2/ERF domain GO:0003700|GO:0006355 AM393_RS17060 43e02eb7c1ba043d6f5f74b29fb65723 176 Gene3D G3DSA:3.30.730.10 113 175 8.4E-7 T 28-03-2018 IPR001471 AP2/ERF domain GO:0003700|GO:0006355 AM393_RS17060 43e02eb7c1ba043d6f5f74b29fb65723 176 SUPERFAMILY SSF54171 113 170 1.31E-9 T 28-03-2018 IPR016177 DNA-binding domain GO:0003677 AM393_RS17060 43e02eb7c1ba043d6f5f74b29fb65723 176 Pfam PF13392 HNH endonuclease 60 103 1.3E-15 T 28-03-2018 IPR003615 HNH nuclease AM393_RS17060 43e02eb7c1ba043d6f5f74b29fb65723 176 SUPERFAMILY SSF54060 11 106 3.65E-23 T 28-03-2018 AM393_RS22975 5f2e798595278a7ee6df39bea4f3c15c 171 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 88 167 1.0E-35 T 28-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 AM393_RS22975 5f2e798595278a7ee6df39bea4f3c15c 171 Gene3D G3DSA:1.10.10.10 84 170 1.5E-37 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS22975 5f2e798595278a7ee6df39bea4f3c15c 171 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 87 166 9.0E-39 T 28-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 AM393_RS22975 5f2e798595278a7ee6df39bea4f3c15c 171 Gene3D G3DSA:3.30.160.70 4 83 6.7E-4 T 28-03-2018 AM393_RS22975 5f2e798595278a7ee6df39bea4f3c15c 171 SUPERFAMILY SSF46767 86 169 2.49E-34 T 28-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 AM393_RS22975 5f2e798595278a7ee6df39bea4f3c15c 171 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 4 83 2.6E-12 T 28-03-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 AM393_RS22975 5f2e798595278a7ee6df39bea4f3c15c 171 SUPERFAMILY SSF53155 7 92 6.67E-7 T 28-03-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 AM393_RS22975 5f2e798595278a7ee6df39bea4f3c15c 171 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 8 167 38.844 T 28-03-2018 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 AM393_RS22975 5f2e798595278a7ee6df39bea4f3c15c 171 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 137 143 - T 28-03-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 AM393_RS11955 1eee096e3073384befa92e2735efd116 309 Pfam PF01758 Sodium Bile acid symporter family 36 213 2.2E-40 T 28-03-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 AM393_RS11390 3924185407a4be796f8dbd10cc0197f5 313 SUPERFAMILY SSF53850 5 219 1.14E-85 T 28-03-2018 AM393_RS11390 3924185407a4be796f8dbd10cc0197f5 313 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 6 297 1.7E-114 T 28-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AM393_RS11390 3924185407a4be796f8dbd10cc0197f5 313 Gene3D G3DSA:3.40.190.10 2 106 2.3E-44 T 28-03-2018 AM393_RS11390 3924185407a4be796f8dbd10cc0197f5 313 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 5 297 40.163 T 28-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AM393_RS11390 3924185407a4be796f8dbd10cc0197f5 313 SUPERFAMILY SSF54782 220 308 7.72E-29 T 28-03-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AM393_RS11390 3924185407a4be796f8dbd10cc0197f5 313 Gene3D G3DSA:3.30.160.40 221 304 4.4E-27 T 28-03-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AM393_RS11390 3924185407a4be796f8dbd10cc0197f5 313 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 6 212 9.3E-79 T 28-03-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AM393_RS11390 3924185407a4be796f8dbd10cc0197f5 313 PIRSF PIRSF001438 1 311 1.3E-123 T 28-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AM393_RS11390 3924185407a4be796f8dbd10cc0197f5 313 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 226 295 1.0E-23 T 28-03-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AM393_RS11390 3924185407a4be796f8dbd10cc0197f5 313 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 231 247 - T 28-03-2018 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AM393_RS11390 3924185407a4be796f8dbd10cc0197f5 313 PRINTS PR00151 Porphobilinogen deaminase signature 45 65 1.4E-49 T 28-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AM393_RS11390 3924185407a4be796f8dbd10cc0197f5 313 PRINTS PR00151 Porphobilinogen deaminase signature 230 247 1.4E-49 T 28-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AM393_RS11390 3924185407a4be796f8dbd10cc0197f5 313 PRINTS PR00151 Porphobilinogen deaminase signature 76 95 1.4E-49 T 28-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AM393_RS11390 3924185407a4be796f8dbd10cc0197f5 313 PRINTS PR00151 Porphobilinogen deaminase signature 124 141 1.4E-49 T 28-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AM393_RS11390 3924185407a4be796f8dbd10cc0197f5 313 PRINTS PR00151 Porphobilinogen deaminase signature 143 160 1.4E-49 T 28-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AM393_RS11390 3924185407a4be796f8dbd10cc0197f5 313 Gene3D G3DSA:3.40.190.10 107 199 1.2E-38 T 28-03-2018 AM393_RS02480 959315f85fd6fa2891b6c0a81592fbe1 885 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 561 672 1.1E-7 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS02480 959315f85fd6fa2891b6c0a81592fbe1 885 Hamap MF_00980 Phosphotransferase RcsD [rcsD]. 9 885 23.555 T 28-03-2018 IPR030861 Phosphotransferase RcsD GO:0000160|GO:0005887|GO:0009927 AM393_RS02480 959315f85fd6fa2891b6c0a81592fbe1 885 Gene3D G3DSA:1.20.120.160 770 885 1.6E-17 T 28-03-2018 AM393_RS02480 959315f85fd6fa2891b6c0a81592fbe1 885 Pfam PF01627 Hpt domain 806 866 1.5E-11 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AM393_RS02480 959315f85fd6fa2891b6c0a81592fbe1 885 SUPERFAMILY SSF47226 801 884 7.72E-22 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AM393_RS02480 959315f85fd6fa2891b6c0a81592fbe1 885 Gene3D G3DSA:3.30.565.10 507 674 5.7E-17 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS02480 959315f85fd6fa2891b6c0a81592fbe1 885 SUPERFAMILY SSF55874 504 674 1.36E-12 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS02480 959315f85fd6fa2891b6c0a81592fbe1 885 Pfam PF16359 RcsD-ABL domain 683 784 8.6E-40 T 28-03-2018 IPR032306 Phosphotransferase RcsD, RcsD-ABL domain AM393_RS20410 3015aba2416e0b4bea613af016684987 415 ProSitePatterns PS00616 Histidine acid phosphatases phosphohistidine signature. 33 47 - T 28-03-2018 IPR033379 Histidine acid phosphatase active site AM393_RS20410 3015aba2416e0b4bea613af016684987 415 ProSitePatterns PS00778 Histidine acid phosphatases active site signature. 307 323 - T 28-03-2018 IPR033379 Histidine acid phosphatase active site AM393_RS20410 3015aba2416e0b4bea613af016684987 415 SUPERFAMILY SSF53254 28 412 1.18E-75 T 28-03-2018 IPR029033 Histidine phosphatase superfamily AM393_RS20410 3015aba2416e0b4bea613af016684987 415 Gene3D G3DSA:3.40.50.1240 15 415 3.6E-52 T 28-03-2018 IPR029033 Histidine phosphatase superfamily AM393_RS20410 3015aba2416e0b4bea613af016684987 415 Pfam PF00328 Histidine phosphatase superfamily (branch 2) 33 365 1.0E-16 T 28-03-2018 IPR000560 Histidine phosphatase superfamily, clade-2 GO:0003993 AM393_RS03290 3edbef27a3ddcbefb5588a2b0c95a20e 229 Gene3D G3DSA:2.60.120.10 86 229 1.3E-32 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AM393_RS03290 3edbef27a3ddcbefb5588a2b0c95a20e 229 Pfam PF06249 Ethanolamine utilisation protein EutQ 81 228 1.6E-65 T 28-03-2018 IPR010424 Ethanolamine utilisation EutQ AM393_RS03290 3edbef27a3ddcbefb5588a2b0c95a20e 229 SUPERFAMILY SSF51182 105 226 1.63E-28 T 28-03-2018 IPR011051 RmlC-like cupin domain AM393_RS20440 481499aa2455b759dd8e28c5259c707f 164 SMART SM00903 13 158 2.6E-51 T 28-03-2018 IPR002563 Flavin reductase like domain GO:0010181 AM393_RS20440 481499aa2455b759dd8e28c5259c707f 164 Hamap MF_00833 FMN reductase (NADH) RutF [rutF]. 1 164 42.402 T 28-03-2018 IPR019917 FMN reductase (NADH) RutF GO:0008752|GO:0055114 KEGG: 00740+1.5.1.42|MetaCyc: PWY-7723 AM393_RS20440 481499aa2455b759dd8e28c5259c707f 164 Gene3D G3DSA:2.30.110.10 2 160 7.0E-37 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 AM393_RS20440 481499aa2455b759dd8e28c5259c707f 164 SUPERFAMILY SSF50475 9 159 5.89E-45 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 AM393_RS20440 481499aa2455b759dd8e28c5259c707f 164 Pfam PF01613 Flavin reductase like domain 13 159 9.9E-32 T 28-03-2018 IPR002563 Flavin reductase like domain GO:0010181 AM393_RS20440 481499aa2455b759dd8e28c5259c707f 164 TIGRFAM TIGR03615 RutF: pyrimidine utilization flavin reductase protein F 5 159 1.4E-81 T 28-03-2018 IPR019917 FMN reductase (NADH) RutF GO:0008752|GO:0055114 KEGG: 00740+1.5.1.42|MetaCyc: PWY-7723 AM393_RS24905 b652fdae115c2467fdfc5ef85cd2eeed 372 TIGRFAM TIGR02534 mucon_cyclo: muconate and chloromuconate cycloisomerases 5 371 7.5E-142 T 28-03-2018 IPR013370 Muconate/chloromuconate cycloisomerase GO:0018849|GO:0018850|GO:0030145 AM393_RS24905 b652fdae115c2467fdfc5ef85cd2eeed 372 SMART SM00922 147 244 2.4E-20 T 28-03-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal AM393_RS24905 b652fdae115c2467fdfc5ef85cd2eeed 372 Gene3D G3DSA:3.20.20.120 133 372 2.2E-52 T 28-03-2018 IPR029065 Enolase C-terminal domain-like AM393_RS24905 b652fdae115c2467fdfc5ef85cd2eeed 372 Pfam PF13378 Enolase C-terminal domain-like 155 363 4.7E-45 T 28-03-2018 IPR029065 Enolase C-terminal domain-like AM393_RS24905 b652fdae115c2467fdfc5ef85cd2eeed 372 Gene3D G3DSA:3.30.390.10 1 132 1.8E-32 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM393_RS24905 b652fdae115c2467fdfc5ef85cd2eeed 372 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 103 128 - T 28-03-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 AM393_RS24905 b652fdae115c2467fdfc5ef85cd2eeed 372 SUPERFAMILY SSF54826 4 129 2.06E-32 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM393_RS24905 b652fdae115c2467fdfc5ef85cd2eeed 372 SUPERFAMILY SSF51604 116 371 2.62E-60 T 28-03-2018 IPR029065 Enolase C-terminal domain-like AM393_RS24905 b652fdae115c2467fdfc5ef85cd2eeed 372 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 9 128 1.3E-31 T 28-03-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain AM393_RS20485 d79fd47dc6e2ae189c1588696392ffc9 502 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 6 490 7.7E-233 T 28-03-2018 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 AM393_RS20485 d79fd47dc6e2ae189c1588696392ffc9 502 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 35 437 9.9E-131 T 28-03-2018 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 AM393_RS20485 d79fd47dc6e2ae189c1588696392ffc9 502 Pfam PF00474 Sodium:solute symporter family 35 437 1.3E-144 T 28-03-2018 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 AM393_RS20485 d79fd47dc6e2ae189c1588696392ffc9 502 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 419 439 - T 28-03-2018 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 AM393_RS20485 d79fd47dc6e2ae189c1588696392ffc9 502 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 157 182 - T 28-03-2018 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 AM393_RS15325 3f3d24792224e487a23c84aeeb09bc83 241 Gene3D G3DSA:3.40.1160.10 2 241 9.1E-44 T 28-03-2018 AM393_RS15325 3f3d24792224e487a23c84aeeb09bc83 241 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 9 240 6.9E-104 T 28-03-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 AM393_RS15325 3f3d24792224e487a23c84aeeb09bc83 241 PIRSF PIRSF005650 4 241 2.2E-89 T 28-03-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 AM393_RS15325 3f3d24792224e487a23c84aeeb09bc83 241 Pfam PF00696 Amino acid kinase family 10 219 6.4E-28 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase AM393_RS15325 3f3d24792224e487a23c84aeeb09bc83 241 Hamap MF_01220_B Uridylate kinase [pyrH]. 7 240 43.504 T 28-03-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 AM393_RS15325 3f3d24792224e487a23c84aeeb09bc83 241 SUPERFAMILY SSF53633 7 240 1.22E-72 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase AM393_RS11680 04270c2ce84bf0374288e71230ff895c 127 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 69 123 4.1E-17 T 28-03-2018 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 AM393_RS11680 04270c2ce84bf0374288e71230ff895c 127 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 71 99 - T 28-03-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AM393_RS11680 04270c2ce84bf0374288e71230ff895c 127 Gene3D G3DSA:1.20.5.1030 68 119 1.6E-18 T 28-03-2018 AM393_RS11680 04270c2ce84bf0374288e71230ff895c 127 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 70 122 3.9E-20 T 28-03-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AM393_RS11680 04270c2ce84bf0374288e71230ff895c 127 PRINTS PR01650 Bacterial translocase SecE signature 65 85 1.0E-41 T 28-03-2018 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 AM393_RS11680 04270c2ce84bf0374288e71230ff895c 127 PRINTS PR01650 Bacterial translocase SecE signature 109 125 1.0E-41 T 28-03-2018 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 AM393_RS11680 04270c2ce84bf0374288e71230ff895c 127 PRINTS PR01650 Bacterial translocase SecE signature 89 109 1.0E-41 T 28-03-2018 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 AM393_RS11680 04270c2ce84bf0374288e71230ff895c 127 PRINTS PR01650 Bacterial translocase SecE signature 44 65 1.0E-41 T 28-03-2018 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 AM393_RS11680 04270c2ce84bf0374288e71230ff895c 127 Hamap MF_00422 Protein translocase subunit SecE [secE]. 67 121 13.188 T 28-03-2018 IPR022943 Preprotein translocase subunit SecE Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AM393_RS19540 77b35805c2b756f3fc2d860901295193 67 Pfam PF05489 Phage Tail Protein X 1 59 5.5E-32 T 28-03-2018 IPR008861 Phage Tail Protein X-like AM393_RS18215 f337325f0864a71d4e8abfdc8c1d6d90 310 Gene3D G3DSA:1.10.10.10 6 89 3.4E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS18215 f337325f0864a71d4e8abfdc8c1d6d90 310 SUPERFAMILY SSF46785 8 89 4.9E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS18215 f337325f0864a71d4e8abfdc8c1d6d90 310 Pfam PF03466 LysR substrate binding domain 134 295 1.2E-13 T 28-03-2018 IPR005119 LysR, substrate-binding AM393_RS18215 f337325f0864a71d4e8abfdc8c1d6d90 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 69 3.2E-18 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS18215 f337325f0864a71d4e8abfdc8c1d6d90 310 Gene3D G3DSA:3.40.190.10 186 270 2.5E-5 T 28-03-2018 AM393_RS18215 f337325f0864a71d4e8abfdc8c1d6d90 310 SUPERFAMILY SSF53850 94 296 3.74E-19 T 28-03-2018 AM393_RS18215 f337325f0864a71d4e8abfdc8c1d6d90 310 Gene3D G3DSA:3.40.190.10 100 185 3.2E-5 T 28-03-2018 AM393_RS01125 2f5fc1c87ef5baf613ff494f33ae81e1 186 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 16 44 2.4E-6 T 28-03-2018 IPR001451 Hexapeptide repeat AM393_RS01125 2f5fc1c87ef5baf613ff494f33ae81e1 186 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 79 111 2.0E-5 T 28-03-2018 IPR001451 Hexapeptide repeat AM393_RS01125 2f5fc1c87ef5baf613ff494f33ae81e1 186 SUPERFAMILY SSF51161 8 139 1.5E-30 T 28-03-2018 IPR011004 Trimeric LpxA-like AM393_RS01125 2f5fc1c87ef5baf613ff494f33ae81e1 186 Gene3D G3DSA:2.160.10.10 8 180 6.5E-32 T 28-03-2018 AM393_RS12815 e2f9310c4db2777e68871cbeac1f895e 420 TIGRFAM TIGR01933 hflK: HflK protein 96 356 5.6E-125 T 28-03-2018 IPR010201 HflK GO:0016021 AM393_RS12815 e2f9310c4db2777e68871cbeac1f895e 420 SMART SM00244 94 254 3.4E-43 T 28-03-2018 IPR001107 Band 7 domain AM393_RS12815 e2f9310c4db2777e68871cbeac1f895e 420 Pfam PF12221 Bacterial membrane protein N terminal 1 59 3.5E-15 T 28-03-2018 IPR020980 Menbrane protein HflK, N-terminal AM393_RS12815 e2f9310c4db2777e68871cbeac1f895e 420 PRINTS PR00721 Stomatin signature 101 123 9.2E-7 T 28-03-2018 IPR001972 Stomatin family GO:0016020 AM393_RS12815 e2f9310c4db2777e68871cbeac1f895e 420 PRINTS PR00721 Stomatin signature 148 169 9.2E-7 T 28-03-2018 IPR001972 Stomatin family GO:0016020 AM393_RS12815 e2f9310c4db2777e68871cbeac1f895e 420 PRINTS PR00721 Stomatin signature 183 200 9.2E-7 T 28-03-2018 IPR001972 Stomatin family GO:0016020 AM393_RS12815 e2f9310c4db2777e68871cbeac1f895e 420 Pfam PF01145 SPFH domain / Band 7 family 98 269 3.4E-30 T 28-03-2018 IPR001107 Band 7 domain AM393_RS12815 e2f9310c4db2777e68871cbeac1f895e 420 SUPERFAMILY SSF117892 127 258 1.83E-20 T 28-03-2018 IPR001107 Band 7 domain AM393_RS21270 46c8ef7ed46beaaedd3e0388dbb941ee 92 Pfam PF07023 Protein of unknown function (DUF1315) 4 79 2.8E-26 T 28-03-2018 IPR009749 Protein of unknown function DUF1315 AM393_RS26870 4e1c406ff20a3d9373e01c16fd1b974a 91 Pfam PF10762 Protein of unknown function (DUF2583) 1 88 4.2E-48 T 28-03-2018 IPR019698 Protein of unknown function DUF2583 AM393_RS18275 07e23f03c645d8ab9582e316266b17bf 68 Hamap MF_00903 Probable Sec-independent protein translocase protein TatE [tatE]. 1 68 26.821 T 28-03-2018 IPR024905 Sec-independent protein translocase protein TatE AM393_RS18275 07e23f03c645d8ab9582e316266b17bf 68 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 68 21.64 T 28-03-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 AM393_RS18275 07e23f03c645d8ab9582e316266b17bf 68 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 4 48 6.1E-21 T 28-03-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 AM393_RS18275 07e23f03c645d8ab9582e316266b17bf 68 Pfam PF02416 mttA/Hcf106 family 4 54 5.3E-14 T 28-03-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 AM393_RS18280 fd8a107269aae5a1bef9f65793ab207a 321 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 25 73 9.2E-7 T 28-03-2018 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AM393_RS18280 fd8a107269aae5a1bef9f65793ab207a 321 PIRSF PIRSF005963 2 321 1.7E-132 T 28-03-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AM393_RS18280 fd8a107269aae5a1bef9f65793ab207a 321 SUPERFAMILY SSF102114 53 316 1.96E-67 T 28-03-2018 AM393_RS18280 fd8a107269aae5a1bef9f65793ab207a 321 Hamap MF_00206 Lipoyl synthase [lipA]. 1 321 158.057 T 28-03-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AM393_RS18280 fd8a107269aae5a1bef9f65793ab207a 321 TIGRFAM TIGR00510 lipA: lipoyl synthase 21 321 9.9E-162 T 28-03-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AM393_RS18280 fd8a107269aae5a1bef9f65793ab207a 321 Pfam PF04055 Radical SAM superfamily 91 251 3.7E-14 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AM393_RS18280 fd8a107269aae5a1bef9f65793ab207a 321 Gene3D G3DSA:3.20.20.70 28 302 1.6E-27 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM393_RS18280 fd8a107269aae5a1bef9f65793ab207a 321 SMART SM00729 84 293 4.1E-15 T 28-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AM393_RS14460 47f3ab4ed62c8a6acef369be91b897b8 316 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 286 38.159 T 28-03-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 AM393_RS14460 47f3ab4ed62c8a6acef369be91b897b8 316 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 284 3.6E-100 T 28-03-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 AM393_RS14460 47f3ab4ed62c8a6acef369be91b897b8 316 Pfam PF02401 LytB protein 3 282 3.6E-92 T 28-03-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 AM393_RS14460 47f3ab4ed62c8a6acef369be91b897b8 316 Gene3D G3DSA:3.40.50.1220 68 283 4.8E-4 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AM393_RS02140 952125a43c05df45db06a176b405da5b 294 Gene3D G3DSA:3.40.140.10 36 173 2.1E-25 T 28-03-2018 AM393_RS02140 952125a43c05df45db06a176b405da5b 294 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 60 139 7.6E-11 T 28-03-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain AM393_RS02140 952125a43c05df45db06a176b405da5b 294 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 102 136 - T 28-03-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 AM393_RS02140 952125a43c05df45db06a176b405da5b 294 Pfam PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region 157 276 1.7E-42 T 28-03-2018 IPR013171 Cytidine/deoxycytidylate deaminase, zinc-binding domain GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 AM393_RS02140 952125a43c05df45db06a176b405da5b 294 SUPERFAMILY SSF53927 152 293 3.01E-41 T 28-03-2018 IPR016193 Cytidine deaminase-like GO:0003824 AM393_RS02140 952125a43c05df45db06a176b405da5b 294 SUPERFAMILY SSF53927 1 149 3.85E-37 T 28-03-2018 IPR016193 Cytidine deaminase-like GO:0003824 AM393_RS02140 952125a43c05df45db06a176b405da5b 294 Gene3D G3DSA:3.40.140.10 180 294 8.4E-15 T 28-03-2018 AM393_RS02140 952125a43c05df45db06a176b405da5b 294 PIRSF PIRSF006334 14 293 3.7E-102 T 28-03-2018 AM393_RS02140 952125a43c05df45db06a176b405da5b 294 Hamap MF_01558 Cytidine deaminase [cdd]. 1 292 47.888 T 28-03-2018 IPR020797 Cytidine deaminase, bacteria GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 AM393_RS00215 e7fb442282002a1a9feddfeff464effe 266 Gene3D G3DSA:3.40.190.10 97 244 1.7E-13 T 28-03-2018 AM393_RS00215 e7fb442282002a1a9feddfeff464effe 266 SUPERFAMILY SSF53850 71 224 5.2E-11 T 28-03-2018 AM393_RS00215 e7fb442282002a1a9feddfeff464effe 266 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 89 248 1.0E-14 T 28-03-2018 AM393_RS25535 24b0641ca05fd6e74c1a36058c8da21a 290 Pfam PF00877 NlpC/P60 family 172 282 2.0E-31 T 28-03-2018 IPR000064 Endopeptidase, NLPC/P60 domain AM393_RS25535 24b0641ca05fd6e74c1a36058c8da21a 290 Gene3D G3DSA:2.30.260.10 209 288 1.1E-18 T 28-03-2018 AM393_RS25535 24b0641ca05fd6e74c1a36058c8da21a 290 SUPERFAMILY SSF54001 152 284 1.41E-42 T 28-03-2018 AM393_RS25535 24b0641ca05fd6e74c1a36058c8da21a 290 Gene3D G3DSA:3.90.1720.10 97 208 2.2E-17 T 28-03-2018 AM393_RS18565 6dceb8ef97a5061cb87529851aa326ea 895 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 778 883 1.2E-21 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS18565 6dceb8ef97a5061cb87529851aa326ea 895 Gene3D G3DSA:3.40.50.620 227 372 5.4E-13 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM393_RS18565 6dceb8ef97a5061cb87529851aa326ea 895 SMART SM00387 774 884 1.9E-31 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS18565 6dceb8ef97a5061cb87529851aa326ea 895 Gene3D G3DSA:1.10.287.130 654 724 9.8E-11 T 28-03-2018 AM393_RS18565 6dceb8ef97a5061cb87529851aa326ea 895 SMART SM00388 663 730 2.5E-13 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM393_RS18565 6dceb8ef97a5061cb87529851aa326ea 895 SUPERFAMILY SSF55874 719 886 5.24E-41 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS18565 6dceb8ef97a5061cb87529851aa326ea 895 Gene3D G3DSA:3.30.450.40 500 653 4.3E-7 T 28-03-2018 IPR029016 GAF domain-like AM393_RS18565 6dceb8ef97a5061cb87529851aa326ea 895 SUPERFAMILY SSF47384 658 731 1.33E-13 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM393_RS18565 6dceb8ef97a5061cb87529851aa326ea 895 Pfam PF13492 GAF domain 528 644 3.5E-7 T 28-03-2018 IPR003018 GAF domain GO:0005515 AM393_RS18565 6dceb8ef97a5061cb87529851aa326ea 895 PRINTS PR00344 Bacterial sensor protein C-terminal signature 829 839 5.6E-13 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM393_RS18565 6dceb8ef97a5061cb87529851aa326ea 895 PRINTS PR00344 Bacterial sensor protein C-terminal signature 868 881 5.6E-13 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM393_RS18565 6dceb8ef97a5061cb87529851aa326ea 895 PRINTS PR00344 Bacterial sensor protein C-terminal signature 844 862 5.6E-13 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM393_RS18565 6dceb8ef97a5061cb87529851aa326ea 895 PRINTS PR00344 Bacterial sensor protein C-terminal signature 811 825 5.6E-13 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM393_RS18565 6dceb8ef97a5061cb87529851aa326ea 895 Gene3D G3DSA:1.20.120.620 401 499 6.9E-26 T 28-03-2018 AM393_RS18565 6dceb8ef97a5061cb87529851aa326ea 895 Pfam PF13493 Domain of unknown function (DUF4118) 403 507 1.9E-28 T 28-03-2018 IPR025201 Sensor protein KdpD, transmembrane domain AM393_RS18565 6dceb8ef97a5061cb87529851aa326ea 895 SUPERFAMILY SSF52402 253 365 5.69E-8 T 28-03-2018 AM393_RS18565 6dceb8ef97a5061cb87529851aa326ea 895 Gene3D G3DSA:3.40.50.300 21 148 7.7E-22 T 28-03-2018 AM393_RS18565 6dceb8ef97a5061cb87529851aa326ea 895 Pfam PF02702 Osmosensitive K+ channel His kinase sensor domain 21 230 2.4E-96 T 28-03-2018 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal GO:0000155|GO:0000160|GO:0004673|GO:0016020 AM393_RS18565 6dceb8ef97a5061cb87529851aa326ea 895 Pfam PF00512 His Kinase A (phospho-acceptor) domain 664 730 9.7E-11 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM393_RS18565 6dceb8ef97a5061cb87529851aa326ea 895 Gene3D G3DSA:3.30.565.10 725 884 5.6E-36 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS13285 d6359b3969b031183f2d6cd6c5788303 167 Pfam PF00583 Acetyltransferase (GNAT) family 45 144 4.1E-15 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AM393_RS13285 d6359b3969b031183f2d6cd6c5788303 167 SUPERFAMILY SSF55729 10 167 3.95E-31 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM393_RS13285 d6359b3969b031183f2d6cd6c5788303 167 Gene3D G3DSA:3.40.630.30 5 150 2.8E-27 T 28-03-2018 AM393_RS15865 04feb84150b2b171f38518c3dd2cde25 367 SMART SM00359 276 359 2.8E-19 T 28-03-2018 IPR002478 PUA domain GO:0003723 AM393_RS15865 04feb84150b2b171f38518c3dd2cde25 367 SUPERFAMILY SSF88697 276 366 4.48E-22 T 28-03-2018 IPR015947 PUA-like domain AM393_RS15865 04feb84150b2b171f38518c3dd2cde25 367 Hamap MF_00456 Glutamate 5-kinase [proB]. 5 259 35.811 T 28-03-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AM393_RS15865 04feb84150b2b171f38518c3dd2cde25 367 Pfam PF01472 PUA domain 276 350 6.5E-21 T 28-03-2018 IPR002478 PUA domain GO:0003723 AM393_RS15865 04feb84150b2b171f38518c3dd2cde25 367 Gene3D G3DSA:2.30.130.10 274 366 7.2E-28 T 28-03-2018 IPR002478 PUA domain GO:0003723 AM393_RS15865 04feb84150b2b171f38518c3dd2cde25 367 ProSitePatterns PS00902 Glutamate 5-kinase signature. 207 224 - T 28-03-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AM393_RS15865 04feb84150b2b171f38518c3dd2cde25 367 TIGRFAM TIGR01027 proB: glutamate 5-kinase 5 366 6.6E-154 T 28-03-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AM393_RS15865 04feb84150b2b171f38518c3dd2cde25 367 PIRSF PIRSF000729 1 367 3.9E-143 T 28-03-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 AM393_RS15865 04feb84150b2b171f38518c3dd2cde25 367 SUPERFAMILY SSF53633 6 256 2.09E-64 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase AM393_RS15865 04feb84150b2b171f38518c3dd2cde25 367 Pfam PF00696 Amino acid kinase family 6 234 8.7E-44 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase AM393_RS15865 04feb84150b2b171f38518c3dd2cde25 367 Gene3D G3DSA:3.40.1160.10 1 265 5.7E-63 T 28-03-2018 AM393_RS15865 04feb84150b2b171f38518c3dd2cde25 367 PRINTS PR00474 Glutamate 5-kinase family signature 76 104 5.8E-56 T 28-03-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AM393_RS15865 04feb84150b2b171f38518c3dd2cde25 367 PRINTS PR00474 Glutamate 5-kinase family signature 148 175 5.8E-56 T 28-03-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AM393_RS15865 04feb84150b2b171f38518c3dd2cde25 367 PRINTS PR00474 Glutamate 5-kinase family signature 209 229 5.8E-56 T 28-03-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AM393_RS15865 04feb84150b2b171f38518c3dd2cde25 367 PRINTS PR00474 Glutamate 5-kinase family signature 42 56 5.8E-56 T 28-03-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AM393_RS15865 04feb84150b2b171f38518c3dd2cde25 367 PRINTS PR00474 Glutamate 5-kinase family signature 116 137 5.8E-56 T 28-03-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AM393_RS24670 cc53f35b8e1d523087cabf33f778fe70 228 Gene3D G3DSA:3.40.190.10 3 108 1.4E-9 T 28-03-2018 AM393_RS24670 cc53f35b8e1d523087cabf33f778fe70 228 SUPERFAMILY SSF53850 9 226 1.09E-30 T 28-03-2018 AM393_RS24670 cc53f35b8e1d523087cabf33f778fe70 228 Gene3D G3DSA:3.40.190.10 109 186 3.3E-10 T 28-03-2018 AM393_RS24670 cc53f35b8e1d523087cabf33f778fe70 228 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 21 225 7.9E-21 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM393_RS24670 cc53f35b8e1d523087cabf33f778fe70 228 SMART SM00062 8 227 1.0E-9 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM393_RS02900 bddf109088aa58c76b1b62f78f900816 274 SUPERFAMILY SSF55166 21 272 8.63E-102 T 28-03-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 AM393_RS02900 bddf109088aa58c76b1b62f78f900816 274 Hamap MF_01623 Penicillin-insensitive murein endopeptidase [mepA]. 1 274 65.723 T 28-03-2018 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 AM393_RS02900 bddf109088aa58c76b1b62f78f900816 274 Gene3D G3DSA:3.30.1380.10 20 274 1.4E-98 T 28-03-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 AM393_RS02900 bddf109088aa58c76b1b62f78f900816 274 Pfam PF03411 Penicillin-insensitive murein endopeptidase 36 270 1.2E-95 T 28-03-2018 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 AM393_RS02900 bddf109088aa58c76b1b62f78f900816 274 PIRSF PIRSF018455 1 274 4.5E-119 T 28-03-2018 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 AM393_RS23745 f12bfd691aa38e678e07ce8ad544c568 307 SUPERFAMILY SSF53850 92 299 2.17E-32 T 28-03-2018 AM393_RS23745 f12bfd691aa38e678e07ce8ad544c568 307 SUPERFAMILY SSF46785 7 104 1.63E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS23745 f12bfd691aa38e678e07ce8ad544c568 307 Gene3D G3DSA:3.40.190.10 86 180 4.9E-18 T 28-03-2018 AM393_RS23745 f12bfd691aa38e678e07ce8ad544c568 307 Gene3D G3DSA:3.40.190.10 181 267 5.6E-17 T 28-03-2018 AM393_RS23745 f12bfd691aa38e678e07ce8ad544c568 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 64 2.2E-17 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS23745 f12bfd691aa38e678e07ce8ad544c568 307 Gene3D G3DSA:1.10.10.10 6 85 9.6E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS23745 f12bfd691aa38e678e07ce8ad544c568 307 Pfam PF03466 LysR substrate binding domain 91 294 6.3E-33 T 28-03-2018 IPR005119 LysR, substrate-binding AM393_RS17805 ece0a5bda0dff68784c1efa4bb9199af 283 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 36 261 7.1E-51 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM393_RS17805 ece0a5bda0dff68784c1efa4bb9199af 283 Gene3D G3DSA:3.40.190.10 30 159 6.3E-32 T 28-03-2018 AM393_RS17805 ece0a5bda0dff68784c1efa4bb9199af 283 Gene3D G3DSA:3.40.190.10 160 281 2.7E-14 T 28-03-2018 AM393_RS17805 ece0a5bda0dff68784c1efa4bb9199af 283 SMART SM00062 35 262 2.4E-42 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM393_RS17805 ece0a5bda0dff68784c1efa4bb9199af 283 SUPERFAMILY SSF53850 1 261 8.57E-54 T 28-03-2018 AM393_RS20195 e47c588248dc8cb42ad3e527ac430caa 55 Pfam PF04957 Ribosome modulation factor 1 51 2.4E-29 T 28-03-2018 IPR007040 Ribosome modulation factor AM393_RS20195 e47c588248dc8cb42ad3e527ac430caa 55 Hamap MF_00919 Ribosome modulation factor [rmf]. 1 55 30.737 T 28-03-2018 IPR007040 Ribosome modulation factor AM393_RS20195 e47c588248dc8cb42ad3e527ac430caa 55 ProDom PD051650 RIBOSOME MODULATION FACTOR E FACTOR-RELATED DIMERIZATION BIOGENESIS RIBOSOMES INVOLVED 70S 1 55 3.0E-23 T 28-03-2018 IPR007040 Ribosome modulation factor AM393_RS20195 e47c588248dc8cb42ad3e527ac430caa 55 Gene3D G3DSA:1.10.10.620 3 53 3.7E-26 T 28-03-2018 AM393_RS11535 59e892801a8967926f615a60183e5a5e 83 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 81 25.104 T 28-03-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 AM393_RS11535 59e892801a8967926f615a60183e5a5e 83 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 48 5.4E-22 T 28-03-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 AM393_RS11535 59e892801a8967926f615a60183e5a5e 83 Pfam PF02416 mttA/Hcf106 family 4 50 7.4E-15 T 28-03-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 AM393_RS07745 89e6692b8ea6c47243101003e6df1685 1486 Pfam PF04898 Glutamate synthase central domain 457 737 1.0E-104 T 28-03-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 AM393_RS07745 89e6692b8ea6c47243101003e6df1685 1486 Pfam PF01645 Conserved region in glutamate synthase 793 1156 5.4E-158 T 28-03-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 AM393_RS07745 89e6692b8ea6c47243101003e6df1685 1486 SUPERFAMILY SSF56235 12 429 8.58E-149 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AM393_RS07745 89e6692b8ea6c47243101003e6df1685 1486 Gene3D G3DSA:3.20.20.70 438 778 3.4E-83 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM393_RS07745 89e6692b8ea6c47243101003e6df1685 1486 Gene3D G3DSA:3.20.20.70 779 1208 1.8E-146 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM393_RS07745 89e6692b8ea6c47243101003e6df1685 1486 Gene3D G3DSA:2.160.20.60 1211 1485 1.3E-95 T 28-03-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 AM393_RS07745 89e6692b8ea6c47243101003e6df1685 1486 SUPERFAMILY SSF51395 434 1191 2.2E-250 T 28-03-2018 AM393_RS07745 89e6692b8ea6c47243101003e6df1685 1486 Gene3D G3DSA:3.60.20.10 12 437 5.7E-143 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AM393_RS07745 89e6692b8ea6c47243101003e6df1685 1486 SUPERFAMILY SSF69336 1211 1465 5.89E-87 T 28-03-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 AM393_RS07745 89e6692b8ea6c47243101003e6df1685 1486 Pfam PF00310 Glutamine amidotransferases class-II 12 425 3.1E-176 T 28-03-2018 IPR017932 Glutamine amidotransferase type 2 domain AM393_RS07745 89e6692b8ea6c47243101003e6df1685 1486 Pfam PF01493 GXGXG motif 1236 1419 8.2E-75 T 28-03-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 AM393_RS03570 ce41c6c8ac8eb650d6b5c20e5dfd18aa 285 SMART SM00450 156 276 1.9E-21 T 28-03-2018 IPR001763 Rhodanese-like domain AM393_RS03570 ce41c6c8ac8eb650d6b5c20e5dfd18aa 285 SMART SM00450 7 133 8.0E-27 T 28-03-2018 IPR001763 Rhodanese-like domain AM393_RS03570 ce41c6c8ac8eb650d6b5c20e5dfd18aa 285 Gene3D G3DSA:3.40.250.10 158 284 3.9E-25 T 28-03-2018 IPR001763 Rhodanese-like domain AM393_RS03570 ce41c6c8ac8eb650d6b5c20e5dfd18aa 285 ProSitePatterns PS00683 Rhodanese C-terminal signature. 260 270 - T 28-03-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 AM393_RS03570 ce41c6c8ac8eb650d6b5c20e5dfd18aa 285 Pfam PF00581 Rhodanese-like domain 9 129 5.9E-17 T 28-03-2018 IPR001763 Rhodanese-like domain AM393_RS03570 ce41c6c8ac8eb650d6b5c20e5dfd18aa 285 Pfam PF00581 Rhodanese-like domain 167 271 1.6E-12 T 28-03-2018 IPR001763 Rhodanese-like domain AM393_RS03570 ce41c6c8ac8eb650d6b5c20e5dfd18aa 285 SUPERFAMILY SSF52821 1 153 1.96E-41 T 28-03-2018 IPR001763 Rhodanese-like domain AM393_RS03570 ce41c6c8ac8eb650d6b5c20e5dfd18aa 285 Gene3D G3DSA:3.40.250.10 1 156 2.0E-33 T 28-03-2018 IPR001763 Rhodanese-like domain AM393_RS03570 ce41c6c8ac8eb650d6b5c20e5dfd18aa 285 SUPERFAMILY SSF52821 166 280 7.46E-35 T 28-03-2018 IPR001763 Rhodanese-like domain AM393_RS06705 568263884476bb605b536f29707f2f9c 299 Pfam PF12833 Helix-turn-helix domain 213 288 6.6E-22 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM393_RS06705 568263884476bb605b536f29707f2f9c 299 SUPERFAMILY SSF46689 191 241 8.29E-11 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS06705 568263884476bb605b536f29707f2f9c 299 Gene3D G3DSA:1.10.10.60 245 297 2.0E-13 T 28-03-2018 AM393_RS06705 568263884476bb605b536f29707f2f9c 299 SUPERFAMILY SSF46689 243 292 2.87E-11 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS06705 568263884476bb605b536f29707f2f9c 299 SMART SM00342 207 290 1.6E-29 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM393_RS06705 568263884476bb605b536f29707f2f9c 299 Gene3D G3DSA:1.10.10.60 187 244 1.8E-14 T 28-03-2018 AM393_RS06705 568263884476bb605b536f29707f2f9c 299 Pfam PF06719 AraC-type transcriptional regulator N-terminus 28 178 5.5E-38 T 28-03-2018 IPR009594 Transcription regulator HTH, AraC, N-terminal AM393_RS06040 566e4e8fcf3bce712b035f8ca36ad483 546 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 386 527 3.3E-31 T 28-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AM393_RS06040 566e4e8fcf3bce712b035f8ca36ad483 546 SUPERFAMILY SSF52467 159 350 2.45E-30 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AM393_RS06040 566e4e8fcf3bce712b035f8ca36ad483 546 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 417 436 - T 28-03-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 AM393_RS06040 566e4e8fcf3bce712b035f8ca36ad483 546 Gene3D G3DSA:3.40.50.970 343 540 3.7E-35 T 28-03-2018 AM393_RS06040 566e4e8fcf3bce712b035f8ca36ad483 546 SUPERFAMILY SSF52518 363 531 7.63E-46 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold AM393_RS06040 566e4e8fcf3bce712b035f8ca36ad483 546 Gene3D G3DSA:3.40.50.1220 186 342 1.3E-26 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AM393_RS06040 566e4e8fcf3bce712b035f8ca36ad483 546 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 6 174 2.8E-42 T 28-03-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 AM393_RS06040 566e4e8fcf3bce712b035f8ca36ad483 546 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 196 324 6.6E-19 T 28-03-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 AM393_RS06040 566e4e8fcf3bce712b035f8ca36ad483 546 SUPERFAMILY SSF52518 3 184 9.22E-40 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold AM393_RS06040 566e4e8fcf3bce712b035f8ca36ad483 546 Gene3D G3DSA:3.40.50.970 1 184 4.9E-36 T 28-03-2018 AM393_RS25930 e4bfa8ee9ed9758db8658abdae0b9524 120 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 54 104 1.9E-5 T 28-03-2018 IPR006260 TonB, C-terminal GO:0006810 AM393_RS25930 e4bfa8ee9ed9758db8658abdae0b9524 120 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 54 106 1.3E-7 T 28-03-2018 IPR006260 TonB, C-terminal GO:0006810 AM393_RS25930 e4bfa8ee9ed9758db8658abdae0b9524 120 Gene3D G3DSA:3.30.2420.10 51 109 6.6E-8 T 28-03-2018 AM393_RS25930 e4bfa8ee9ed9758db8658abdae0b9524 120 SUPERFAMILY SSF74653 54 98 1.0E-5 T 28-03-2018 AM393_RS21510 10764a4947417bfe4e732de3e8b16914 110 Pfam PF10729 Cell division activator CedA 32 108 1.4E-52 T 28-03-2018 IPR019666 Cell division activator CedA GO:0003677|GO:0051301 AM393_RS15060 dae96e04155bd145a3320493e02f0035 178 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 7 173 1.6E-74 T 28-03-2018 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620 AM393_RS15060 dae96e04155bd145a3320493e02f0035 178 SUPERFAMILY SSF53271 3 173 2.75E-54 T 28-03-2018 IPR029057 Phosphoribosyltransferase-like AM393_RS15060 dae96e04155bd145a3320493e02f0035 178 Gene3D G3DSA:3.40.50.2020 1 175 1.6E-42 T 28-03-2018 AM393_RS15060 dae96e04155bd145a3320493e02f0035 178 Pfam PF00156 Phosphoribosyl transferase domain 13 160 1.2E-24 T 28-03-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 AM393_RS14455 dbc8f6c92381a019633cf75c62116324 149 Gene3D G3DSA:3.10.50.40 2 149 2.8E-20 T 28-03-2018 AM393_RS14455 dbc8f6c92381a019633cf75c62116324 149 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 5 141 6.0E-15 T 28-03-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AM393_RS14455 dbc8f6c92381a019633cf75c62116324 149 SUPERFAMILY SSF54534 5 143 2.95E-36 T 28-03-2018 AM393_RS27350 596b24f2f5201ebe8471952c7c277739 484 Gene3D G3DSA:3.20.20.450 232 483 2.5E-68 T 28-03-2018 IPR001633 EAL domain AM393_RS27350 596b24f2f5201ebe8471952c7c277739 484 Pfam PF00563 EAL domain 237 468 1.8E-53 T 28-03-2018 IPR001633 EAL domain AM393_RS27350 596b24f2f5201ebe8471952c7c277739 484 SUPERFAMILY SSF141868 238 479 7.06E-65 T 28-03-2018 IPR001633 EAL domain AM393_RS27350 596b24f2f5201ebe8471952c7c277739 484 SMART SM00052 230 474 5.9E-68 T 28-03-2018 IPR001633 EAL domain AM393_RS27350 596b24f2f5201ebe8471952c7c277739 484 Pfam PF12792 CSS motif domain associated with EAL 5 204 3.4E-34 T 28-03-2018 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain AM393_RS24660 153b0a5ff703b9ea04763f99e3a5c02b 307 Pfam PF01545 Cation efflux family 24 217 2.7E-43 T 28-03-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AM393_RS24660 153b0a5ff703b9ea04763f99e3a5c02b 307 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 20 299 6.1E-67 T 28-03-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AM393_RS24660 153b0a5ff703b9ea04763f99e3a5c02b 307 Pfam PF16916 Dimerisation domain of Zinc Transporter 222 298 1.2E-23 T 28-03-2018 IPR027470 Cation efflux protein, cytoplasmic domain AM393_RS24660 153b0a5ff703b9ea04763f99e3a5c02b 307 SUPERFAMILY SSF161111 19 218 1.31E-53 T 28-03-2018 AM393_RS24660 153b0a5ff703b9ea04763f99e3a5c02b 307 Gene3D G3DSA:1.20.1510.10 18 216 3.2E-44 T 28-03-2018 AM393_RS24660 153b0a5ff703b9ea04763f99e3a5c02b 307 Gene3D G3DSA:3.30.70.1350 217 305 7.2E-25 T 28-03-2018 IPR027470 Cation efflux protein, cytoplasmic domain AM393_RS24660 153b0a5ff703b9ea04763f99e3a5c02b 307 SUPERFAMILY SSF160240 220 299 1.7E-23 T 28-03-2018 AM393_RS02860 bd4d2a5493bda88954e814622f3d130c 378 SUPERFAMILY SSF51735 91 244 1.97E-33 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS02860 bd4d2a5493bda88954e814622f3d130c 378 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 8 279 3.3E-18 T 28-03-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 AM393_RS02860 bd4d2a5493bda88954e814622f3d130c 378 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 119 146 - T 28-03-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 AM393_RS02860 bd4d2a5493bda88954e814622f3d130c 378 Hamap MF_01825 Erythronate-4-phosphate dehydrogenase [pdxB]. 1 357 47.707 T 28-03-2018 IPR020921 Erythronate-4-phosphate dehydrogenase GO:0005737|GO:0008615|GO:0033711|GO:0055114 KEGG: 00260+1.1.1.29|KEGG: 00630+1.1.1.29|KEGG: 00680+1.1.1.29|KEGG: 00750+1.1.1.290|MetaCyc: PWY-181 AM393_RS02860 bd4d2a5493bda88954e814622f3d130c 378 Pfam PF11890 Domain of unknown function (DUF3410) 289 369 6.5E-29 T 28-03-2018 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain GO:0046983 KEGG: 00260+1.1.1.29|KEGG: 00630+1.1.1.29|KEGG: 00680+1.1.1.29|KEGG: 00750+1.1.1.290|MetaCyc: PWY-181 AM393_RS02860 bd4d2a5493bda88954e814622f3d130c 378 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 197 213 - T 28-03-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AM393_RS02860 bd4d2a5493bda88954e814622f3d130c 378 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 110 246 9.8E-31 T 28-03-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AM393_RS02860 bd4d2a5493bda88954e814622f3d130c 378 Gene3D G3DSA:3.40.50.720 108 259 1.9E-30 T 28-03-2018 AM393_RS02860 bd4d2a5493bda88954e814622f3d130c 378 SUPERFAMILY SSF52283 11 110 2.13E-18 T 28-03-2018 AM393_RS02860 bd4d2a5493bda88954e814622f3d130c 378 Gene3D G3DSA:3.40.50.720 1 107 3.5E-21 T 28-03-2018 AM393_RS07005 8fa9fa968180ca8d6fe0e293c668fda8 141 PIRSF PIRSF018505 1 141 7.8E-71 T 28-03-2018 IPR003207 Propanediol/glycerol dehydratase, small subunit KEGG: 00640+4.2.1.28|MetaCyc: PWY-7013 AM393_RS07005 8fa9fa968180ca8d6fe0e293c668fda8 141 Pfam PF02287 Dehydratase small subunit 7 138 9.1E-60 T 28-03-2018 IPR003207 Propanediol/glycerol dehydratase, small subunit KEGG: 00640+4.2.1.28|MetaCyc: PWY-7013 AM393_RS07005 8fa9fa968180ca8d6fe0e293c668fda8 141 SUPERFAMILY SSF47148 4 139 1.83E-63 T 28-03-2018 IPR003207 Propanediol/glycerol dehydratase, small subunit KEGG: 00640+4.2.1.28|MetaCyc: PWY-7013 AM393_RS05385 30bce35c24ace7ac206c42ce2a4aac00 107 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 8 29 0.0011 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site AM393_RS05385 30bce35c24ace7ac206c42ce2a4aac00 107 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 9 29 - T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site AM393_RS05385 30bce35c24ace7ac206c42ce2a4aac00 107 Pfam PF12528 Type II secretion prepilin peptidase dependent protein C 33 104 4.2E-20 T 28-03-2018 IPR022204 Prepilin peptidase dependent protein C AM393_RS23550 87c46c4c316c3aaf8f6c9c30f55187d2 328 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 1 326 35.467 T 28-03-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 AM393_RS23550 87c46c4c316c3aaf8f6c9c30f55187d2 328 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 5 326 6.2E-112 T 28-03-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 AM393_RS23550 87c46c4c316c3aaf8f6c9c30f55187d2 328 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 34 322 3.8E-103 T 28-03-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 AM393_RS23550 87c46c4c316c3aaf8f6c9c30f55187d2 328 SUPERFAMILY SSF53659 3 326 1.02E-105 T 28-03-2018 AM393_RS23550 87c46c4c316c3aaf8f6c9c30f55187d2 328 Gene3D G3DSA:3.40.718.10 1 328 1.5E-125 T 28-03-2018 AM393_RS21210 7a9ecab133bffd7b4f6461a99940a537 405 Gene3D G3DSA:1.20.1250.20 8 196 5.6E-20 T 28-03-2018 AM393_RS21210 7a9ecab133bffd7b4f6461a99940a537 405 Gene3D G3DSA:1.20.1250.20 202 398 1.3E-13 T 28-03-2018 AM393_RS21210 7a9ecab133bffd7b4f6461a99940a537 405 Pfam PF07690 Major Facilitator Superfamily 24 335 1.5E-31 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS21210 7a9ecab133bffd7b4f6461a99940a537 405 SUPERFAMILY SSF103473 8 391 1.27E-46 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS16225 e8aa90ffebb74ebdc9eb94b82eba2b45 463 Pfam PF03611 PTS system sugar-specific permease component 10 404 2.0E-125 T 28-03-2018 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 AM393_RS16380 4e3bdd16d892ee5caf89283467b5bef2 454 Gene3D G3DSA:1.20.1250.20 253 432 1.9E-23 T 28-03-2018 AM393_RS16380 4e3bdd16d892ee5caf89283467b5bef2 454 Gene3D G3DSA:1.20.1250.20 13 214 5.2E-38 T 28-03-2018 AM393_RS16380 4e3bdd16d892ee5caf89283467b5bef2 454 SUPERFAMILY SSF103473 8 428 3.01E-76 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS16380 4e3bdd16d892ee5caf89283467b5bef2 454 ProSitePatterns PS00216 Sugar transport proteins signature 1. 79 95 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM393_RS16380 4e3bdd16d892ee5caf89283467b5bef2 454 ProSitePatterns PS00217 Sugar transport proteins signature 2. 121 146 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM393_RS16380 4e3bdd16d892ee5caf89283467b5bef2 454 Pfam PF07690 Major Facilitator Superfamily 30 339 7.8E-40 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS14215 a8f8ab547f62228a677681ddf18af59a 259 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 11 232 1.3E-85 T 28-03-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 AM393_RS14215 a8f8ab547f62228a677681ddf18af59a 259 SUPERFAMILY SSF51569 6 246 1.36E-81 T 28-03-2018 AM393_RS14215 a8f8ab547f62228a677681ddf18af59a 259 SMART SM01133 10 246 2.6E-79 T 28-03-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 AM393_RS14215 a8f8ab547f62228a677681ddf18af59a 259 Pfam PF01791 DeoC/LacD family aldolase 11 245 5.4E-52 T 28-03-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 AM393_RS14215 a8f8ab547f62228a677681ddf18af59a 259 PIRSF PIRSF001357 5 255 1.4E-76 T 28-03-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 AM393_RS14215 a8f8ab547f62228a677681ddf18af59a 259 Hamap MF_00592 Deoxyribose-phosphate aldolase [deoC]. 1 259 54.537 T 28-03-2018 IPR023649 Deoxyribose-phosphate aldolase type II GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180 AM393_RS14215 a8f8ab547f62228a677681ddf18af59a 259 Gene3D G3DSA:3.20.20.70 1 258 3.9E-81 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM393_RS12235 9b83ee91d518a0b5aad682f60675919a 109 Gene3D G3DSA:1.10.10.60 58 109 4.9E-15 T 28-03-2018 AM393_RS12235 9b83ee91d518a0b5aad682f60675919a 109 SUPERFAMILY SSF46689 4 56 1.68E-11 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS12235 9b83ee91d518a0b5aad682f60675919a 109 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 58 100 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM393_RS12235 9b83ee91d518a0b5aad682f60675919a 109 SMART SM00342 21 104 1.5E-33 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM393_RS12235 9b83ee91d518a0b5aad682f60675919a 109 Pfam PF12833 Helix-turn-helix domain 27 105 8.6E-24 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM393_RS12235 9b83ee91d518a0b5aad682f60675919a 109 SUPERFAMILY SSF46689 57 106 8.51E-14 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS12235 9b83ee91d518a0b5aad682f60675919a 109 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 88 104 2.5E-7 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM393_RS12235 9b83ee91d518a0b5aad682f60675919a 109 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 73 88 2.5E-7 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM393_RS12235 9b83ee91d518a0b5aad682f60675919a 109 Gene3D G3DSA:1.10.10.60 1 57 2.8E-16 T 28-03-2018 AM393_RS13750 a7748adec3168130eb29f539a1f6514b 318 Gene3D G3DSA:1.10.3470.10 22 311 9.4E-26 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AM393_RS13750 a7748adec3168130eb29f539a1f6514b 318 Pfam PF02653 Branched-chain amino acid transport system / permease component 38 305 9.7E-39 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AM393_RS15305 f6389bcfdd6b012e195b317e88d40812 887 SUPERFAMILY SSF55021 702 775 4.16E-10 T 28-03-2018 AM393_RS15305 f6389bcfdd6b012e195b317e88d40812 887 PIRSF PIRSF006288 22 886 0.0 T 28-03-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 AM393_RS15305 f6389bcfdd6b012e195b317e88d40812 887 Gene3D G3DSA:3.30.460.10 50 183 2.2E-23 T 28-03-2018 AM393_RS15305 f6389bcfdd6b012e195b317e88d40812 887 SMART SM00471 461 608 1.8E-12 T 28-03-2018 IPR003607 HD/PDEase domain AM393_RS15305 f6389bcfdd6b012e195b317e88d40812 887 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 887 345.503 T 28-03-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 AM393_RS15305 f6389bcfdd6b012e195b317e88d40812 887 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 52 881 3.5E-300 T 28-03-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 AM393_RS15305 f6389bcfdd6b012e195b317e88d40812 887 Pfam PF01966 HD domain 465 598 3.8E-17 T 28-03-2018 IPR006674 HD domain AM393_RS15305 f6389bcfdd6b012e195b317e88d40812 887 Pfam PF01842 ACT domain 814 871 5.7E-9 T 28-03-2018 IPR002912 ACT domain AM393_RS15305 f6389bcfdd6b012e195b317e88d40812 887 Pfam PF01842 ACT domain 706 757 1.9E-7 T 28-03-2018 IPR002912 ACT domain AM393_RS15305 f6389bcfdd6b012e195b317e88d40812 887 Pfam PF01909 Nucleotidyltransferase domain 78 134 1.1E-6 T 28-03-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 AM393_RS15305 f6389bcfdd6b012e195b317e88d40812 887 Gene3D G3DSA:1.10.3090.10 357 668 5.4E-37 T 28-03-2018 AM393_RS15305 f6389bcfdd6b012e195b317e88d40812 887 Gene3D G3DSA:3.30.70.260 698 781 1.0E-10 T 28-03-2018 AM393_RS15305 f6389bcfdd6b012e195b317e88d40812 887 Gene3D G3DSA:3.30.70.260 806 883 3.7E-11 T 28-03-2018 AM393_RS15305 f6389bcfdd6b012e195b317e88d40812 887 SUPERFAMILY SSF109604 454 597 2.83E-14 T 28-03-2018 AM393_RS15305 f6389bcfdd6b012e195b317e88d40812 887 Gene3D G3DSA:1.20.120.330 187 331 9.2E-23 T 28-03-2018 AM393_RS15305 f6389bcfdd6b012e195b317e88d40812 887 SUPERFAMILY SSF81301 31 185 1.31E-20 T 28-03-2018 AM393_RS15305 f6389bcfdd6b012e195b317e88d40812 887 SUPERFAMILY SSF55021 812 870 8.4E-10 T 28-03-2018 AM393_RS15305 f6389bcfdd6b012e195b317e88d40812 887 Pfam PF08335 GlnD PII-uridylyltransferase 190 328 1.7E-34 T 28-03-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 AM393_RS15305 f6389bcfdd6b012e195b317e88d40812 887 SUPERFAMILY SSF81593 209 325 7.06E-9 T 28-03-2018 AM393_RS27705 dd89ba11b94076e13dfc909f73255512 769 Gene3D G3DSA:1.10.3680.10 505 633 2.3E-12 T 28-03-2018 IPR029024 TerB-like AM393_RS27705 dd89ba11b94076e13dfc909f73255512 769 Pfam PF05099 Tellurite resistance protein TerB 509 624 1.2E-7 T 28-03-2018 IPR007791 Co-chaperone DjlA, N-terminal AM393_RS27705 dd89ba11b94076e13dfc909f73255512 769 SUPERFAMILY SSF158682 512 630 2.62E-19 T 28-03-2018 AM393_RS27705 dd89ba11b94076e13dfc909f73255512 769 Pfam PF13208 TerB N-terminal domain 98 309 7.7E-46 T 28-03-2018 IPR025266 TerB, N-terminal AM393_RS27705 dd89ba11b94076e13dfc909f73255512 769 Pfam PF15615 TerB-C domain 644 767 8.0E-26 T 28-03-2018 IPR028932 TerB-C domain AM393_RS21150 3168cb7e49ac2d7617cac60fc0d601e6 394 Gene3D G3DSA:1.20.1250.20 1 194 6.2E-17 T 28-03-2018 AM393_RS21150 3168cb7e49ac2d7617cac60fc0d601e6 394 Pfam PF07690 Major Facilitator Superfamily 21 349 8.8E-21 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS21150 3168cb7e49ac2d7617cac60fc0d601e6 394 Gene3D G3DSA:1.20.1250.20 202 392 1.0E-19 T 28-03-2018 AM393_RS21150 3168cb7e49ac2d7617cac60fc0d601e6 394 TIGRFAM TIGR00896 CynX: cyanate transporter 15 368 3.7E-132 T 28-03-2018 IPR004747 Cyanate transport system protein GO:0016021 AM393_RS21150 3168cb7e49ac2d7617cac60fc0d601e6 394 SUPERFAMILY SSF103473 8 389 1.31E-44 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS08730 0a172b668ef827283ee76b041de579a1 815 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 654 666 - T 28-03-2018 IPR035090 Phosphorylase pyridoxal-phosphate attachment site KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 AM393_RS08730 0a172b668ef827283ee76b041de579a1 815 Pfam PF00343 Carbohydrate phosphorylase 102 810 0.0 T 28-03-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 AM393_RS08730 0a172b668ef827283ee76b041de579a1 815 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 14 810 0.0 T 28-03-2018 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 AM393_RS08730 0a172b668ef827283ee76b041de579a1 815 PIRSF PIRSF000460 2 815 3.4E-237 T 28-03-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 AM393_RS08730 0a172b668ef827283ee76b041de579a1 815 Gene3D G3DSA:3.40.50.2000 481 795 1.5E-144 T 28-03-2018 AM393_RS08730 0a172b668ef827283ee76b041de579a1 815 SUPERFAMILY SSF53756 9 814 0.0 T 28-03-2018 AM393_RS08730 0a172b668ef827283ee76b041de579a1 815 Gene3D G3DSA:3.40.50.2000 5 480 6.2E-197 T 28-03-2018 AM393_RS18645 bd1fe410bcb9a0d0a740d8ee44f476a3 427 PIRSF PIRSF001369 38 427 8.7E-177 T 28-03-2018 IPR024176 Citrate synthase, bacterial-type AM393_RS18645 bd1fe410bcb9a0d0a740d8ee44f476a3 427 Gene3D G3DSA:1.10.580.10 28 281 4.5E-88 T 28-03-2018 IPR016142 Citrate synthase-like, large alpha subdomain AM393_RS18645 bd1fe410bcb9a0d0a740d8ee44f476a3 427 Gene3D G3DSA:1.10.230.10 282 379 2.4E-37 T 28-03-2018 IPR016143 Citrate synthase-like, small alpha subdomain AM393_RS18645 bd1fe410bcb9a0d0a740d8ee44f476a3 427 PRINTS PR00143 Citrate synthase signature 165 178 5.1E-56 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 AM393_RS18645 bd1fe410bcb9a0d0a740d8ee44f476a3 427 PRINTS PR00143 Citrate synthase signature 359 375 5.1E-56 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 AM393_RS18645 bd1fe410bcb9a0d0a740d8ee44f476a3 427 PRINTS PR00143 Citrate synthase signature 219 234 5.1E-56 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 AM393_RS18645 bd1fe410bcb9a0d0a740d8ee44f476a3 427 PRINTS PR00143 Citrate synthase signature 241 269 5.1E-56 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 AM393_RS18645 bd1fe410bcb9a0d0a740d8ee44f476a3 427 PRINTS PR00143 Citrate synthase signature 379 393 5.1E-56 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 AM393_RS18645 bd1fe410bcb9a0d0a740d8ee44f476a3 427 PRINTS PR00143 Citrate synthase signature 296 316 5.1E-56 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 AM393_RS18645 bd1fe410bcb9a0d0a740d8ee44f476a3 427 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 14 421 7.7E-244 T 28-03-2018 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 AM393_RS18645 bd1fe410bcb9a0d0a740d8ee44f476a3 427 ProSitePatterns PS00480 Citrate synthase signature. 303 315 - T 28-03-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 AM393_RS18645 bd1fe410bcb9a0d0a740d8ee44f476a3 427 SUPERFAMILY SSF48256 11 422 5.36E-169 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 AM393_RS18645 bd1fe410bcb9a0d0a740d8ee44f476a3 427 Pfam PF00285 Citrate synthase, C-terminal domain 46 410 6.9E-133 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 AM393_RS22965 9701d564ffe8c734ff1b05817f004d90 316 Pfam PF00582 Universal stress protein family 174 300 7.3E-14 T 28-03-2018 IPR006016 UspA GO:0006950 AM393_RS22965 9701d564ffe8c734ff1b05817f004d90 316 Pfam PF00582 Universal stress protein family 4 146 3.0E-19 T 28-03-2018 IPR006016 UspA GO:0006950 AM393_RS22965 9701d564ffe8c734ff1b05817f004d90 316 SUPERFAMILY SSF52402 155 307 6.87E-24 T 28-03-2018 AM393_RS22965 9701d564ffe8c734ff1b05817f004d90 316 Gene3D G3DSA:3.40.50.620 156 304 2.7E-23 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM393_RS22965 9701d564ffe8c734ff1b05817f004d90 316 Gene3D G3DSA:3.40.50.620 1 155 4.8E-19 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM393_RS22965 9701d564ffe8c734ff1b05817f004d90 316 SUPERFAMILY SSF52402 4 155 1.67E-26 T 28-03-2018 AM393_RS03260 07027284f91b1ea2fdbeeb934c09ba99 279 Gene3D G3DSA:3.30.420.40 5 144 2.5E-14 T 28-03-2018 AM393_RS03260 07027284f91b1ea2fdbeeb934c09ba99 279 SUPERFAMILY SSF53067 31 132 2.2E-10 T 28-03-2018 AM393_RS03260 07027284f91b1ea2fdbeeb934c09ba99 279 TIGRFAM TIGR02529 EutJ: ethanolamine utilization protein EutJ family protein 34 267 1.3E-107 T 28-03-2018 IPR013366 Ethanolamine utilisation EutJ AM393_RS03260 07027284f91b1ea2fdbeeb934c09ba99 279 Pfam PF14450 Cell division protein FtsA 142 246 1.2E-7 T 28-03-2018 AM393_RS03260 07027284f91b1ea2fdbeeb934c09ba99 279 SUPERFAMILY SSF53067 142 259 2.41E-19 T 28-03-2018 AM393_RS03260 07027284f91b1ea2fdbeeb934c09ba99 279 Gene3D G3DSA:3.30.420.150 145 258 5.3E-14 T 28-03-2018 AM393_RS10385 ff65b6a462df91e7a92343dfe09f435b 85 Pfam PF01809 Haemolytic domain 10 75 5.5E-31 T 28-03-2018 IPR002696 Putative membrane protein insertion efficiency factor AM393_RS10385 ff65b6a462df91e7a92343dfe09f435b 85 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 22 68 3.0E-20 T 28-03-2018 IPR002696 Putative membrane protein insertion efficiency factor AM393_RS10385 ff65b6a462df91e7a92343dfe09f435b 85 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 8 76 25.378 T 28-03-2018 IPR002696 Putative membrane protein insertion efficiency factor AM393_RS10385 ff65b6a462df91e7a92343dfe09f435b 85 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 12 77 8.6E-33 T 28-03-2018 IPR002696 Putative membrane protein insertion efficiency factor AM393_RS10385 ff65b6a462df91e7a92343dfe09f435b 85 SMART SM01234 8 75 2.5E-45 T 28-03-2018 IPR002696 Putative membrane protein insertion efficiency factor AM393_RS28615 ff23ab7681f623333ee085b8ee6a55e6 190 Gene3D G3DSA:1.10.10.10 1 102 6.2E-6 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS19310 ed93a01e13c12abfc4339a814536909c 810 Pfam PF02901 Pyruvate formate lyase-like 11 671 1.4E-213 T 28-03-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 AM393_RS19310 ed93a01e13c12abfc4339a814536909c 810 Gene3D G3DSA:3.20.70.20 9 810 1.4E-277 T 28-03-2018 AM393_RS19310 ed93a01e13c12abfc4339a814536909c 810 ProSitePatterns PS00850 Glycine radical domain signature. 781 789 - T 28-03-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site AM393_RS19310 ed93a01e13c12abfc4339a814536909c 810 Pfam PF01228 Glycine radical 688 791 1.1E-29 T 28-03-2018 IPR001150 Glycine radical domain GO:0003824|GO:0008152 AM393_RS19310 ed93a01e13c12abfc4339a814536909c 810 PIRSF PIRSF000379 40 810 7.8E-195 T 28-03-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 AM393_RS19310 ed93a01e13c12abfc4339a814536909c 810 TIGRFAM TIGR01774 PFL2-3: glycyl radical enzyme, PFL2/glycerol dehydratase family 9 810 0.0 T 28-03-2018 IPR010098 Glycyl radical enzyme, PFL2/glycerol dehydratase family KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 AM393_RS19310 ed93a01e13c12abfc4339a814536909c 810 SUPERFAMILY SSF51998 9 809 1.68E-231 T 28-03-2018 AM393_RS24510 04b70169e9973c193dad1daa5517e2ef 447 SMART SM00304 172 225 4.5E-5 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM393_RS24510 04b70169e9973c193dad1daa5517e2ef 447 Gene3D G3DSA:1.10.287.130 216 280 1.9E-6 T 28-03-2018 AM393_RS24510 04b70169e9973c193dad1daa5517e2ef 447 Gene3D G3DSA:3.30.565.10 287 442 2.8E-29 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS24510 04b70169e9973c193dad1daa5517e2ef 447 SMART SM00387 325 435 6.8E-26 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS24510 04b70169e9973c193dad1daa5517e2ef 447 SUPERFAMILY SSF55874 283 431 4.45E-30 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS24510 04b70169e9973c193dad1daa5517e2ef 447 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 328 431 9.5E-20 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS24510 04b70169e9973c193dad1daa5517e2ef 447 SUPERFAMILY SSF47384 210 282 2.94E-10 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM393_RS24510 04b70169e9973c193dad1daa5517e2ef 447 PRINTS PR00344 Bacterial sensor protein C-terminal signature 360 374 4.2E-10 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM393_RS24510 04b70169e9973c193dad1daa5517e2ef 447 PRINTS PR00344 Bacterial sensor protein C-terminal signature 395 413 4.2E-10 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM393_RS24510 04b70169e9973c193dad1daa5517e2ef 447 PRINTS PR00344 Bacterial sensor protein C-terminal signature 378 388 4.2E-10 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM393_RS24510 04b70169e9973c193dad1daa5517e2ef 447 SMART SM00388 226 284 2.7E-5 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM393_RS23290 bdc244323a78d616a06363198eec9af5 249 SUPERFAMILY SSF51735 3 231 1.39E-60 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS23290 bdc244323a78d616a06363198eec9af5 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 73 84 7.7E-9 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS23290 bdc244323a78d616a06363198eec9af5 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 127 135 7.7E-9 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS23290 bdc244323a78d616a06363198eec9af5 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 166 7.7E-9 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS23290 bdc244323a78d616a06363198eec9af5 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 202 222 3.1E-21 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS23290 bdc244323a78d616a06363198eec9af5 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 3.1E-21 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS23290 bdc244323a78d616a06363198eec9af5 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 2 19 3.1E-21 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS23290 bdc244323a78d616a06363198eec9af5 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 121 137 3.1E-21 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS23290 bdc244323a78d616a06363198eec9af5 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 185 3.1E-21 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS23290 bdc244323a78d616a06363198eec9af5 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 166 3.1E-21 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS23290 bdc244323a78d616a06363198eec9af5 249 Gene3D G3DSA:3.40.50.720 1 235 1.4E-58 T 28-03-2018 AM393_RS23290 bdc244323a78d616a06363198eec9af5 249 Pfam PF00106 short chain dehydrogenase 2 187 3.0E-53 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS23290 bdc244323a78d616a06363198eec9af5 249 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 134 162 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM393_RS25765 03623489878fb241264176f758151d6a 322 SUPERFAMILY SSF63380 3 101 1.4E-22 T 28-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AM393_RS25765 03623489878fb241264176f758151d6a 322 Gene3D G3DSA:3.10.20.30 223 322 4.4E-18 T 28-03-2018 IPR012675 Beta-grasp domain AM393_RS25765 03623489878fb241264176f758151d6a 322 PRINTS PR00409 Phthalate dioxygenase reductase family signature 31 41 1.4E-29 T 28-03-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 AM393_RS25765 03623489878fb241264176f758151d6a 322 PRINTS PR00409 Phthalate dioxygenase reductase family signature 137 146 1.4E-29 T 28-03-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 AM393_RS25765 03623489878fb241264176f758151d6a 322 PRINTS PR00409 Phthalate dioxygenase reductase family signature 41 53 1.4E-29 T 28-03-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 AM393_RS25765 03623489878fb241264176f758151d6a 322 PRINTS PR00409 Phthalate dioxygenase reductase family signature 53 67 1.4E-29 T 28-03-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 AM393_RS25765 03623489878fb241264176f758151d6a 322 PRINTS PR00409 Phthalate dioxygenase reductase family signature 112 131 1.4E-29 T 28-03-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 AM393_RS25765 03623489878fb241264176f758151d6a 322 PRINTS PR00409 Phthalate dioxygenase reductase family signature 191 199 1.4E-29 T 28-03-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 AM393_RS25765 03623489878fb241264176f758151d6a 322 PRINTS PR00409 Phthalate dioxygenase reductase family signature 77 91 1.4E-29 T 28-03-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 AM393_RS25765 03623489878fb241264176f758151d6a 322 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 243 313 2.1E-9 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AM393_RS25765 03623489878fb241264176f758151d6a 322 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 271 279 - T 28-03-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AM393_RS25765 03623489878fb241264176f758151d6a 322 Gene3D G3DSA:2.40.30.10 5 102 2.7E-12 T 28-03-2018 AM393_RS25765 03623489878fb241264176f758151d6a 322 Gene3D G3DSA:3.40.50.80 103 222 1.0E-17 T 28-03-2018 AM393_RS25765 03623489878fb241264176f758151d6a 322 SUPERFAMILY SSF54292 213 320 1.26E-23 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AM393_RS25765 03623489878fb241264176f758151d6a 322 SUPERFAMILY SSF52343 99 228 2.75E-23 T 28-03-2018 AM393_RS07200 9fd6f705de1087db3577b207b59622ce 433 Gene3D G3DSA:1.20.1250.20 1 202 1.4E-39 T 28-03-2018 AM393_RS07200 9fd6f705de1087db3577b207b59622ce 433 Pfam PF07690 Major Facilitator Superfamily 301 421 1.0E-8 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS07200 9fd6f705de1087db3577b207b59622ce 433 Pfam PF07690 Major Facilitator Superfamily 16 287 9.9E-48 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS07200 9fd6f705de1087db3577b207b59622ce 433 TIGRFAM TIGR00893 2A0114: D-galactonate transporter 17 411 4.8E-123 T 28-03-2018 IPR004744 D-galactonate transporter GO:0005215|GO:0006810|GO:0016021 AM393_RS07200 9fd6f705de1087db3577b207b59622ce 433 Gene3D G3DSA:1.20.1250.20 214 422 4.4E-26 T 28-03-2018 AM393_RS07200 9fd6f705de1087db3577b207b59622ce 433 SUPERFAMILY SSF103473 3 414 2.35E-81 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS26085 704a09d7aff5f6d4cd92039d761ebd03 240 PIRSF PIRSF039085 1 240 1.7E-115 T 28-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 AM393_RS26085 704a09d7aff5f6d4cd92039d761ebd03 240 SMART SM00382 26 213 1.2E-16 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS26085 704a09d7aff5f6d4cd92039d761ebd03 240 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS26085 704a09d7aff5f6d4cd92039d761ebd03 240 SUPERFAMILY SSF52540 1 235 8.11E-79 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS26085 704a09d7aff5f6d4cd92039d761ebd03 240 Pfam PF00005 ABC transporter 17 165 3.5E-35 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS26085 704a09d7aff5f6d4cd92039d761ebd03 240 Gene3D G3DSA:3.40.50.300 1 239 1.8E-75 T 28-03-2018 AM393_RS05170 bd4f23642971e9ec859cd5496cccb7ca 236 Gene3D G3DSA:3.40.1010.10 2 147 2.5E-23 T 28-03-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AM393_RS05170 bd4f23642971e9ec859cd5496cccb7ca 236 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 8 22 - T 28-03-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AM393_RS05170 bd4f23642971e9ec859cd5496cccb7ca 236 SUPERFAMILY SSF53790 1 234 1.83E-42 T 28-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AM393_RS05170 bd4f23642971e9ec859cd5496cccb7ca 236 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 4 210 9.5E-44 T 28-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AM393_RS05170 bd4f23642971e9ec859cd5496cccb7ca 236 TIGRFAM TIGR01467 cobI_cbiL: precorrin-2 C(20)-methyltransferase 3 231 5.9E-79 T 28-03-2018 IPR006364 Precorrin-2 C(20)-methyltransferase domain GO:0008757|GO:0009236 AM393_RS05170 bd4f23642971e9ec859cd5496cccb7ca 236 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 94 126 - T 28-03-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AM393_RS05170 bd4f23642971e9ec859cd5496cccb7ca 236 PIRSF PIRSF036427 1 236 9.7E-72 T 28-03-2018 IPR012382 Precorrin-2 C(20)-methyltransferase GO:0008757|GO:0009236|GO:0030788 AM393_RS02735 5862e054c13d34d07265543762d627ed 164 SUPERFAMILY SSF116960 1 164 1.07E-71 T 28-03-2018 AM393_RS02735 5862e054c13d34d07265543762d627ed 164 PIRSF PIRSF006272 1 164 3.4E-81 T 28-03-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU AM393_RS02735 5862e054c13d34d07265543762d627ed 164 Hamap MF_00762 UPF0304 protein YfbU [yfbU]. 1 164 40.058 T 28-03-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU AM393_RS02735 5862e054c13d34d07265543762d627ed 164 ProDom PD035118 UPF0304 YFBU PLASMID YPO2563/Y1624/YP2374 YBFU PM1500 OXYGEN ECA3037 VV12093 PROTEIN 1 164 6.0E-91 T 28-03-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU AM393_RS02735 5862e054c13d34d07265543762d627ed 164 Gene3D G3DSA:1.10.3190.10 54 164 1.9E-44 T 28-03-2018 IPR023146 YfbU, alpha-helical bundle domain AM393_RS02735 5862e054c13d34d07265543762d627ed 164 Gene3D G3DSA:1.10.287.680 1 47 1.3E-26 T 28-03-2018 IPR023145 YfbU, helix-hairpin domain AM393_RS02735 5862e054c13d34d07265543762d627ed 164 Pfam PF03887 YfbU domain 1 164 2.5E-70 T 28-03-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU AM393_RS08560 e2091b23fda4a396ca2e9659c031b374 414 Pfam PF03958 Bacterial type II/III secretion system short domain 123 180 1.4E-6 T 28-03-2018 IPR005644 NolW-like AM393_RS08560 e2091b23fda4a396ca2e9659c031b374 414 Pfam PF00263 Bacterial type II and III secretion system protein 252 411 9.9E-46 T 28-03-2018 IPR004846 Type II/III secretion system GO:0009306 AM393_RS08560 e2091b23fda4a396ca2e9659c031b374 414 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 357 390 - T 28-03-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 AM393_RS08560 e2091b23fda4a396ca2e9659c031b374 414 TIGRFAM TIGR02515 IV_pilus_PilQ: type IV pilus secretin PilQ 24 411 6.0E-121 T 28-03-2018 IPR013355 Type IV pilus secretin PilQ AM393_RS08560 e2091b23fda4a396ca2e9659c031b374 414 PRINTS PR01032 Gene IV protein signature 339 367 1.2E-10 T 28-03-2018 AM393_RS08560 e2091b23fda4a396ca2e9659c031b374 414 PRINTS PR01032 Gene IV protein signature 273 296 1.2E-10 T 28-03-2018 AM393_RS08560 e2091b23fda4a396ca2e9659c031b374 414 PRINTS PR01032 Gene IV protein signature 232 255 1.2E-10 T 28-03-2018 AM393_RS08560 e2091b23fda4a396ca2e9659c031b374 414 PRINTS PR01032 Gene IV protein signature 394 414 1.2E-10 T 28-03-2018 AM393_RS08560 e2091b23fda4a396ca2e9659c031b374 414 PRINTS PR00811 Bacterial general secretion pathway protein D signature 248 272 1.9E-12 T 28-03-2018 IPR001775 GspD/PilQ family AM393_RS08560 e2091b23fda4a396ca2e9659c031b374 414 PRINTS PR00811 Bacterial general secretion pathway protein D signature 376 394 1.9E-12 T 28-03-2018 IPR001775 GspD/PilQ family AM393_RS08560 e2091b23fda4a396ca2e9659c031b374 414 PRINTS PR00811 Bacterial general secretion pathway protein D signature 399 413 1.9E-12 T 28-03-2018 IPR001775 GspD/PilQ family AM393_RS17895 09c1f473a6f752031eb9f1bb264ae2dd 175 PIRSF PIRSF009103 20 172 8.2E-41 T 28-03-2018 IPR014453 Inhibitor of vertebrate lysozyme GO:0042597|GO:0043086 AM393_RS17895 09c1f473a6f752031eb9f1bb264ae2dd 175 Pfam PF08816 Inhibitor of vertebrate lysozyme (Ivy) 58 170 2.9E-28 T 28-03-2018 AM393_RS17895 09c1f473a6f752031eb9f1bb264ae2dd 175 Gene3D G3DSA:3.40.1420.10 51 169 3.2E-38 T 28-03-2018 AM393_RS17895 09c1f473a6f752031eb9f1bb264ae2dd 175 SUPERFAMILY SSF89872 49 174 9.02E-44 T 28-03-2018 IPR014453 Inhibitor of vertebrate lysozyme GO:0042597|GO:0043086 AM393_RS07105 63bd149361ff775864bfe4727000ffd0 98 Hamap MF_02051 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase [lsrG]. 1 96 36.46 T 28-03-2018 IPR033672 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase GO:0016853 AM393_RS07105 63bd149361ff775864bfe4727000ffd0 98 Gene3D G3DSA:3.30.70.100 2 91 5.0E-24 T 28-03-2018 AM393_RS07105 63bd149361ff775864bfe4727000ffd0 98 SUPERFAMILY SSF54909 1 91 1.04E-25 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel AM393_RS07105 63bd149361ff775864bfe4727000ffd0 98 Pfam PF03992 Antibiotic biosynthesis monooxygenase 4 76 7.9E-19 T 28-03-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain AM393_RS13375 7893e57ed041ebf97b42aa3bbaf42e42 637 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 276 289 - T 28-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AM393_RS13375 7893e57ed041ebf97b42aa3bbaf42e42 637 SUPERFAMILY SSF53613 6 332 1.06E-70 T 28-03-2018 IPR029056 Ribokinase-like AM393_RS13375 7893e57ed041ebf97b42aa3bbaf42e42 637 Gene3D G3DSA:3.40.1190.20 8 337 3.4E-63 T 28-03-2018 IPR029056 Ribokinase-like AM393_RS13375 7893e57ed041ebf97b42aa3bbaf42e42 637 TIGRFAM TIGR04382 myo_inos_iolC_N: 5-dehydro-2-deoxygluconokinase 8 332 6.5E-125 T 28-03-2018 IPR030830 5-Dehydro-2-deoxygluconokinase KEGG: 00562+2.7.1.92 AM393_RS13375 7893e57ed041ebf97b42aa3bbaf42e42 637 Gene3D G3DSA:3.20.20.70 343 637 4.5E-71 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM393_RS13375 7893e57ed041ebf97b42aa3bbaf42e42 637 Pfam PF00294 pfkB family carbohydrate kinase 9 324 8.1E-46 T 28-03-2018 IPR011611 Carbohydrate kinase PfkB AM393_RS13375 7893e57ed041ebf97b42aa3bbaf42e42 637 Pfam PF09863 Uncharacterized protein conserved in bacteria (DUF2090) 327 636 4.9E-143 T 28-03-2018 IPR018659 Protein of unknown function DUF2090 AM393_RS21360 aaaa06115a930a072ff472a242b99266 347 Gene3D G3DSA:3.30.1330.10 1 162 6.3E-38 T 28-03-2018 IPR016188 PurM-like, N-terminal domain AM393_RS21360 aaaa06115a930a072ff472a242b99266 347 TIGRFAM TIGR00476 selD: selenide, water dikinase 7 313 8.3E-134 T 28-03-2018 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 AM393_RS21360 aaaa06115a930a072ff472a242b99266 347 SUPERFAMILY SSF55326 7 162 5.53E-41 T 28-03-2018 IPR016188 PurM-like, N-terminal domain AM393_RS21360 aaaa06115a930a072ff472a242b99266 347 PIRSF PIRSF036407 1 346 1.4E-115 T 28-03-2018 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 AM393_RS21360 aaaa06115a930a072ff472a242b99266 347 Hamap MF_00625 Selenide, water dikinase [selD]. 5 347 45.136 T 28-03-2018 IPR023061 Selenophosphate synthetase, class I GO:0004756|GO:0005524|GO:0016260 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 AM393_RS21360 aaaa06115a930a072ff472a242b99266 347 Gene3D G3DSA:3.90.650.10 164 347 1.4E-41 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain AM393_RS21360 aaaa06115a930a072ff472a242b99266 347 Pfam PF00586 AIR synthase related protein, N-terminal domain 50 157 9.0E-19 T 28-03-2018 IPR016188 PurM-like, N-terminal domain AM393_RS21360 aaaa06115a930a072ff472a242b99266 347 Pfam PF02769 AIR synthase related protein, C-terminal domain 169 341 2.2E-30 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain AM393_RS21360 aaaa06115a930a072ff472a242b99266 347 SUPERFAMILY SSF56042 164 339 2.24E-49 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain AM393_RS12115 37d936a9ea90b7f2ea6376bc74e4aad2 397 Gene3D G3DSA:3.90.1150.10 308 397 3.5E-26 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM393_RS12115 37d936a9ea90b7f2ea6376bc74e4aad2 397 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 244 257 - T 28-03-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 AM393_RS12115 37d936a9ea90b7f2ea6376bc74e4aad2 397 PRINTS PR00799 Aspartate aminotransferase signature 176 195 1.3E-37 T 28-03-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AM393_RS12115 37d936a9ea90b7f2ea6376bc74e4aad2 397 PRINTS PR00799 Aspartate aminotransferase signature 207 219 1.3E-37 T 28-03-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AM393_RS12115 37d936a9ea90b7f2ea6376bc74e4aad2 397 PRINTS PR00799 Aspartate aminotransferase signature 274 299 1.3E-37 T 28-03-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AM393_RS12115 37d936a9ea90b7f2ea6376bc74e4aad2 397 PRINTS PR00799 Aspartate aminotransferase signature 342 360 1.3E-37 T 28-03-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AM393_RS12115 37d936a9ea90b7f2ea6376bc74e4aad2 397 Gene3D G3DSA:3.90.1150.10 1 77 2.9E-11 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM393_RS12115 37d936a9ea90b7f2ea6376bc74e4aad2 397 Gene3D G3DSA:3.40.640.10 78 307 6.4E-31 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM393_RS12115 37d936a9ea90b7f2ea6376bc74e4aad2 397 Pfam PF00155 Aminotransferase class I and II 27 392 3.4E-83 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AM393_RS12115 37d936a9ea90b7f2ea6376bc74e4aad2 397 SUPERFAMILY SSF53383 2 396 1.3E-120 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM393_RS23440 3c2509e0effa6e95b9b407f96c2815b6 367 Gene3D G3DSA:3.20.20.210 2 367 1.9E-102 T 28-03-2018 AM393_RS23440 3c2509e0effa6e95b9b407f96c2815b6 367 SUPERFAMILY SSF51726 10 367 3.27E-82 T 28-03-2018 AM393_RS23440 3c2509e0effa6e95b9b407f96c2815b6 367 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 12 345 1.7E-12 T 28-03-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 AM393_RS20690 8f775e7c496669b5ea6967e90181025b 217 Pfam PF04337 Protein of unknown function, DUF480 5 158 3.2E-62 T 28-03-2018 IPR007432 Protein of unknown function DUF480 AM393_RS20690 8f775e7c496669b5ea6967e90181025b 217 Hamap MF_01584 UPF0502 protein YceH [yceH]. 5 213 34.053 T 28-03-2018 IPR007432 Protein of unknown function DUF480 AM393_RS20690 8f775e7c496669b5ea6967e90181025b 217 SUPERFAMILY SSF46785 2 84 1.5E-31 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS20690 8f775e7c496669b5ea6967e90181025b 217 Gene3D G3DSA:1.10.10.10 97 171 1.6E-32 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS20690 8f775e7c496669b5ea6967e90181025b 217 SUPERFAMILY SSF46785 90 172 6.62E-27 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS20690 8f775e7c496669b5ea6967e90181025b 217 Gene3D G3DSA:1.10.10.10 2 87 1.9E-37 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS00955 a15f1a7f0f793745ed0baf0320e74d78 303 Pfam PF00892 EamA-like transporter family 150 284 6.1E-19 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM393_RS00955 a15f1a7f0f793745ed0baf0320e74d78 303 Pfam PF00892 EamA-like transporter family 13 140 2.8E-18 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM393_RS00955 a15f1a7f0f793745ed0baf0320e74d78 303 SUPERFAMILY SSF103481 42 144 1.22E-10 T 28-03-2018 AM393_RS00955 a15f1a7f0f793745ed0baf0320e74d78 303 SUPERFAMILY SSF103481 185 287 1.28E-12 T 28-03-2018 AM393_RS16210 2f85cf0a8ed5b7ee2fffde7efbe81948 622 Gene3D G3DSA:2.30.40.10 4 72 1.0E-18 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM393_RS16210 2f85cf0a8ed5b7ee2fffde7efbe81948 622 Pfam PF07969 Amidohydrolase family 52 536 2.7E-123 T 28-03-2018 IPR013108 Amidohydrolase 3 AM393_RS16210 2f85cf0a8ed5b7ee2fffde7efbe81948 622 Gene3D G3DSA:2.30.40.10 482 543 0.0025 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM393_RS16210 2f85cf0a8ed5b7ee2fffde7efbe81948 622 SUPERFAMILY SSF51338 2 64 8.95E-22 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM393_RS16210 2f85cf0a8ed5b7ee2fffde7efbe81948 622 SUPERFAMILY SSF51338 495 544 8.95E-22 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM393_RS16210 2f85cf0a8ed5b7ee2fffde7efbe81948 622 Gene3D G3DSA:3.20.20.140 73 481 5.5E-35 T 28-03-2018 AM393_RS16210 2f85cf0a8ed5b7ee2fffde7efbe81948 622 SUPERFAMILY SSF51556 63 125 3.57E-44 T 28-03-2018 IPR032466 Metal-dependent hydrolase AM393_RS16210 2f85cf0a8ed5b7ee2fffde7efbe81948 622 SUPERFAMILY SSF51556 205 496 3.57E-44 T 28-03-2018 IPR032466 Metal-dependent hydrolase AM393_RS17905 d18775ce1124e409966d1378db59fea1 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 6.6E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS17905 d18775ce1124e409966d1378db59fea1 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 6.6E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS17905 d18775ce1124e409966d1378db59fea1 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 6.6E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS17905 d18775ce1124e409966d1378db59fea1 297 Gene3D G3DSA:1.10.10.10 6 87 8.3E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS17905 d18775ce1124e409966d1378db59fea1 297 Gene3D G3DSA:3.40.190.10 177 257 1.5E-14 T 28-03-2018 AM393_RS17905 d18775ce1124e409966d1378db59fea1 297 SUPERFAMILY SSF53850 94 289 2.48E-37 T 28-03-2018 AM393_RS17905 d18775ce1124e409966d1378db59fea1 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 66 5.9E-22 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS17905 d18775ce1124e409966d1378db59fea1 297 Pfam PF03466 LysR substrate binding domain 94 287 1.4E-36 T 28-03-2018 IPR005119 LysR, substrate-binding AM393_RS17905 d18775ce1124e409966d1378db59fea1 297 SUPERFAMILY SSF46785 5 86 1.96E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS17905 d18775ce1124e409966d1378db59fea1 297 Gene3D G3DSA:3.40.190.10 94 176 3.6E-18 T 28-03-2018 AM393_RS22455 d116e2b4ef3be65cae35f629dc3846d3 288 Gene3D G3DSA:3.60.15.10 9 285 3.7E-39 T 28-03-2018 IPR001279 Metallo-beta-lactamase AM393_RS22455 d116e2b4ef3be65cae35f629dc3846d3 288 SMART SM00849 46 246 1.0E-20 T 28-03-2018 IPR001279 Metallo-beta-lactamase AM393_RS22455 d116e2b4ef3be65cae35f629dc3846d3 288 Pfam PF00753 Metallo-beta-lactamase superfamily 46 238 6.3E-24 T 28-03-2018 IPR001279 Metallo-beta-lactamase AM393_RS22455 d116e2b4ef3be65cae35f629dc3846d3 288 SUPERFAMILY SSF56281 43 265 2.09E-35 T 28-03-2018 IPR001279 Metallo-beta-lactamase AM393_RS26170 74ac54bf5b65d525f08d1db11e393b45 526 SUPERFAMILY SSF52821 373 524 2.1E-31 T 28-03-2018 IPR001763 Rhodanese-like domain AM393_RS26170 74ac54bf5b65d525f08d1db11e393b45 526 SMART SM00450 266 363 8.8E-8 T 28-03-2018 IPR001763 Rhodanese-like domain AM393_RS26170 74ac54bf5b65d525f08d1db11e393b45 526 SMART SM00450 8 105 3.1E-8 T 28-03-2018 IPR001763 Rhodanese-like domain AM393_RS26170 74ac54bf5b65d525f08d1db11e393b45 526 SMART SM00450 376 471 2.8E-7 T 28-03-2018 IPR001763 Rhodanese-like domain AM393_RS26170 74ac54bf5b65d525f08d1db11e393b45 526 SMART SM00450 131 229 4.6E-6 T 28-03-2018 IPR001763 Rhodanese-like domain AM393_RS26170 74ac54bf5b65d525f08d1db11e393b45 526 Gene3D G3DSA:3.40.250.10 253 374 1.2E-15 T 28-03-2018 IPR001763 Rhodanese-like domain AM393_RS26170 74ac54bf5b65d525f08d1db11e393b45 526 Gene3D G3DSA:3.40.250.10 8 118 5.0E-17 T 28-03-2018 IPR001763 Rhodanese-like domain AM393_RS26170 74ac54bf5b65d525f08d1db11e393b45 526 SUPERFAMILY SSF52821 252 347 6.81E-21 T 28-03-2018 IPR001763 Rhodanese-like domain AM393_RS26170 74ac54bf5b65d525f08d1db11e393b45 526 SUPERFAMILY SSF52821 14 108 1.83E-20 T 28-03-2018 IPR001763 Rhodanese-like domain AM393_RS26170 74ac54bf5b65d525f08d1db11e393b45 526 Gene3D G3DSA:3.40.250.10 119 252 7.6E-19 T 28-03-2018 IPR001763 Rhodanese-like domain AM393_RS26170 74ac54bf5b65d525f08d1db11e393b45 526 Pfam PF00581 Rhodanese-like domain 15 101 7.0E-6 T 28-03-2018 IPR001763 Rhodanese-like domain AM393_RS26170 74ac54bf5b65d525f08d1db11e393b45 526 Pfam PF00581 Rhodanese-like domain 377 467 2.3E-6 T 28-03-2018 IPR001763 Rhodanese-like domain AM393_RS26170 74ac54bf5b65d525f08d1db11e393b45 526 Pfam PF00581 Rhodanese-like domain 131 225 1.7E-10 T 28-03-2018 IPR001763 Rhodanese-like domain AM393_RS26170 74ac54bf5b65d525f08d1db11e393b45 526 Pfam PF00581 Rhodanese-like domain 275 346 6.4E-6 T 28-03-2018 IPR001763 Rhodanese-like domain AM393_RS26170 74ac54bf5b65d525f08d1db11e393b45 526 Gene3D G3DSA:3.40.250.10 375 479 1.0E-17 T 28-03-2018 IPR001763 Rhodanese-like domain AM393_RS26170 74ac54bf5b65d525f08d1db11e393b45 526 ProSitePatterns PS00380 Rhodanese signature 1. 401 412 - T 28-03-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 AM393_RS26170 74ac54bf5b65d525f08d1db11e393b45 526 SUPERFAMILY SSF52821 107 233 1.03E-29 T 28-03-2018 IPR001763 Rhodanese-like domain AM393_RS04230 a2347e4e2eb2272bb1bbb4c5eeac16b6 133 PIRSF PIRSF002096 1 133 1.2E-53 T 28-03-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 AM393_RS04230 a2347e4e2eb2272bb1bbb4c5eeac16b6 133 SMART SM00528 86 133 2.1E-22 T 28-03-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 AM393_RS04230 a2347e4e2eb2272bb1bbb4c5eeac16b6 133 SUPERFAMILY SSF81273 91 133 1.18E-11 T 28-03-2018 AM393_RS04230 a2347e4e2eb2272bb1bbb4c5eeac16b6 133 Gene3D G3DSA:4.10.430.10 92 133 2.3E-18 T 28-03-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 AM393_RS04230 a2347e4e2eb2272bb1bbb4c5eeac16b6 133 Pfam PF00816 H-NS histone family 38 127 1.3E-19 T 28-03-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 AM393_RS04230 a2347e4e2eb2272bb1bbb4c5eeac16b6 133 Gene3D G3DSA:1.10.287.1050 1 57 3.0E-20 T 28-03-2018 IPR027454 Histone-like protein H-NS family, oligomerisation domain GO:0046983 AM393_RS04230 a2347e4e2eb2272bb1bbb4c5eeac16b6 133 SUPERFAMILY SSF81273 2 57 7.65E-15 T 28-03-2018 AM393_RS19220 a21712424cdf5b70fdf31533c7d74bbc 167 PIRSF PIRSF005900 8 167 2.0E-42 T 28-03-2018 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 AM393_RS19220 a21712424cdf5b70fdf31533c7d74bbc 167 Pfam PF00210 Ferritin-like domain 30 166 1.4E-22 T 28-03-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 AM393_RS19220 a21712424cdf5b70fdf31533c7d74bbc 167 Hamap MF_01441 DNA protection during starvation protein [dps]. 1 167 48.259 T 28-03-2018 IPR023067 DNA protection during starvation protein, gammaproteobacteria GO:0016722|GO:0055114 AM393_RS19220 a21712424cdf5b70fdf31533c7d74bbc 167 ProSitePatterns PS00818 Dps protein family signature 1. 51 67 - T 28-03-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 AM393_RS19220 a21712424cdf5b70fdf31533c7d74bbc 167 ProSitePatterns PS00819 Dps protein family signature 2. 77 91 - T 28-03-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 AM393_RS19220 a21712424cdf5b70fdf31533c7d74bbc 167 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 144 162 2.0E-13 T 28-03-2018 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 AM393_RS19220 a21712424cdf5b70fdf31533c7d74bbc 167 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 51 67 2.0E-13 T 28-03-2018 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 AM393_RS19220 a21712424cdf5b70fdf31533c7d74bbc 167 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 75 91 2.0E-13 T 28-03-2018 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 AM393_RS19220 a21712424cdf5b70fdf31533c7d74bbc 167 Gene3D G3DSA:1.20.1260.10 1 167 3.3E-40 T 28-03-2018 IPR012347 Ferritin-related AM393_RS19220 a21712424cdf5b70fdf31533c7d74bbc 167 SUPERFAMILY SSF47240 10 167 1.38E-49 T 28-03-2018 IPR009078 Ferritin-like superfamily AM393_RS16995 e2affdca048db19d24659a18a488cbdc 77 Gene3D G3DSA:3.30.240.10 1 77 1.7E-15 T 28-03-2018 AM393_RS16995 e2affdca048db19d24659a18a488cbdc 77 Pfam PF15943 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT 7 66 1.2E-21 T 28-03-2018 IPR031856 Putative bacterial antitoxin YdaS AM393_RS16995 e2affdca048db19d24659a18a488cbdc 77 SUPERFAMILY SSF47413 6 65 8.89E-11 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM393_RS22770 b05863b9c75a6f915bbb4a2b6537bc78 424 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 188 420 1.8E-73 T 28-03-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AM393_RS22770 b05863b9c75a6f915bbb4a2b6537bc78 424 SMART SM00839 190 420 2.4E-89 T 28-03-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AM393_RS22770 b05863b9c75a6f915bbb4a2b6537bc78 424 SUPERFAMILY SSF51735 188 423 3.12E-75 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS22770 b05863b9c75a6f915bbb4a2b6537bc78 424 PIRSF PIRSF000185 9 423 3.6E-159 T 28-03-2018 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 AM393_RS22770 b05863b9c75a6f915bbb4a2b6537bc78 424 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 42 170 2.1E-54 T 28-03-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AM393_RS22770 b05863b9c75a6f915bbb4a2b6537bc78 424 Gene3D G3DSA:3.40.50.720 188 423 2.6E-74 T 28-03-2018 AM393_RS22770 b05863b9c75a6f915bbb4a2b6537bc78 424 Gene3D G3DSA:3.40.50.10860 40 175 3.3E-52 T 28-03-2018 AM393_RS22770 b05863b9c75a6f915bbb4a2b6537bc78 424 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 221 241 1.5E-31 T 28-03-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AM393_RS22770 b05863b9c75a6f915bbb4a2b6537bc78 424 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 179 201 1.5E-31 T 28-03-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AM393_RS22770 b05863b9c75a6f915bbb4a2b6537bc78 424 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 99 113 1.5E-31 T 28-03-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AM393_RS22770 b05863b9c75a6f915bbb4a2b6537bc78 424 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 348 359 1.5E-31 T 28-03-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AM393_RS22770 b05863b9c75a6f915bbb4a2b6537bc78 424 SUPERFAMILY SSF53223 10 190 8.32E-69 T 28-03-2018 AM393_RS22770 b05863b9c75a6f915bbb4a2b6537bc78 424 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 107 120 - T 28-03-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AM393_RS00300 658b1d2b2edce0b3c970d4910b2609bd 516 Pfam PF06450 Bacterial Na+/H+ antiporter B (NhaB) 2 511 2.3E-290 T 28-03-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 AM393_RS00300 658b1d2b2edce0b3c970d4910b2609bd 516 TIGRFAM TIGR00774 NhaB: Na+/H+ antiporter NhaB 2 512 1.8E-292 T 28-03-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 AM393_RS00300 658b1d2b2edce0b3c970d4910b2609bd 516 Hamap MF_01599 Na(+)/H(+) antiporter NhaB [nhaB]. 1 516 366.312 T 28-03-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 AM393_RS09965 c5c99b1f69e1da3481df4d20f648dfe7 269 Gene3D G3DSA:3.40.190.10 126 269 3.3E-47 T 28-03-2018 AM393_RS09965 c5c99b1f69e1da3481df4d20f648dfe7 269 Gene3D G3DSA:3.40.190.10 30 125 1.2E-15 T 28-03-2018 AM393_RS09965 c5c99b1f69e1da3481df4d20f648dfe7 269 PIRSF PIRSF002854 1 269 1.4E-96 T 28-03-2018 IPR004872 Lipoprotein NlpA family AM393_RS09965 c5c99b1f69e1da3481df4d20f648dfe7 269 SUPERFAMILY SSF53850 31 269 3.04E-78 T 28-03-2018 AM393_RS09965 c5c99b1f69e1da3481df4d20f648dfe7 269 Pfam PF03180 NLPA lipoprotein 31 269 6.9E-94 T 28-03-2018 IPR004872 Lipoprotein NlpA family AM393_RS09965 c5c99b1f69e1da3481df4d20f648dfe7 269 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 12 269 5.8E-143 T 28-03-2018 IPR004872 Lipoprotein NlpA family AM393_RS01895 3dbfb0b33108f1ef9ea4605e8abe0d8a 471 Gene3D G3DSA:1.20.1250.20 6 196 3.3E-33 T 28-03-2018 AM393_RS01895 3dbfb0b33108f1ef9ea4605e8abe0d8a 471 Pfam PF07690 Major Facilitator Superfamily 15 405 9.2E-48 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS01895 3dbfb0b33108f1ef9ea4605e8abe0d8a 471 SUPERFAMILY SSF103473 244 450 6.15E-61 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS01895 3dbfb0b33108f1ef9ea4605e8abe0d8a 471 SUPERFAMILY SSF103473 7 194 6.15E-61 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS01895 3dbfb0b33108f1ef9ea4605e8abe0d8a 471 Hamap MF_01577 Putative multidrug resistance protein MdtD [mdtD]. 1 465 48.201 T 28-03-2018 IPR023721 Multidrug resistance protein MdtD, putative AM393_RS01895 3dbfb0b33108f1ef9ea4605e8abe0d8a 471 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 16 430 3.5E-69 T 28-03-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 AM393_RS01895 3dbfb0b33108f1ef9ea4605e8abe0d8a 471 Gene3D G3DSA:1.20.1250.20 255 461 1.0E-23 T 28-03-2018 AM393_RS01895 3dbfb0b33108f1ef9ea4605e8abe0d8a 471 PRINTS PR01036 Tetracycline resistance protein TetB signature 396 415 3.8E-8 T 28-03-2018 AM393_RS01895 3dbfb0b33108f1ef9ea4605e8abe0d8a 471 PRINTS PR01036 Tetracycline resistance protein TetB signature 105 125 3.8E-8 T 28-03-2018 AM393_RS01895 3dbfb0b33108f1ef9ea4605e8abe0d8a 471 PRINTS PR01036 Tetracycline resistance protein TetB signature 199 217 3.8E-8 T 28-03-2018 AM393_RS01895 3dbfb0b33108f1ef9ea4605e8abe0d8a 471 PRINTS PR01036 Tetracycline resistance protein TetB signature 14 38 3.8E-8 T 28-03-2018 AM393_RS01895 3dbfb0b33108f1ef9ea4605e8abe0d8a 471 PRINTS PR01036 Tetracycline resistance protein TetB signature 135 159 3.8E-8 T 28-03-2018 AM393_RS03360 34448b17b8f10b4daca2f6a12baa553c 231 Pfam PF02230 Phospholipase/Carboxylesterase 4 206 4.3E-47 T 28-03-2018 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 AM393_RS03360 34448b17b8f10b4daca2f6a12baa553c 231 Gene3D G3DSA:3.40.50.1820 3 205 1.2E-22 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AM393_RS03360 34448b17b8f10b4daca2f6a12baa553c 231 SUPERFAMILY SSF53474 5 204 1.26E-31 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AM393_RS21395 1e722b091bec2682f63feab5e96a5690 210 Gene3D G3DSA:3.40.50.300 1 208 7.5E-46 T 28-03-2018 AM393_RS21395 1e722b091bec2682f63feab5e96a5690 210 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS21395 1e722b091bec2682f63feab5e96a5690 210 SUPERFAMILY SSF52540 2 197 1.43E-47 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS21395 1e722b091bec2682f63feab5e96a5690 210 Pfam PF00005 ABC transporter 17 161 6.6E-28 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS21395 1e722b091bec2682f63feab5e96a5690 210 SMART SM00382 26 200 0.0038 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS09700 79ee4cfd255906487645a5993f85b1d1 78 SUPERFAMILY SSF143800 2 77 6.28E-30 T 28-03-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS09700 79ee4cfd255906487645a5993f85b1d1 78 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 57 1.2E-27 T 28-03-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM393_RS09700 79ee4cfd255906487645a5993f85b1d1 78 Gene3D G3DSA:2.30.170.40 2 75 2.0E-28 T 28-03-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS09700 79ee4cfd255906487645a5993f85b1d1 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 21.212 T 28-03-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM393_RS09700 79ee4cfd255906487645a5993f85b1d1 78 Pfam PF00830 Ribosomal L28 family 3 62 1.9E-25 T 28-03-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS09435 16bebc9577b8ccb3f0322cae7a23885c 440 PRINTS PR00688 Xylose isomerase signature 156 175 6.9E-85 T 28-03-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 AM393_RS09435 16bebc9577b8ccb3f0322cae7a23885c 440 PRINTS PR00688 Xylose isomerase signature 133 153 6.9E-85 T 28-03-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 AM393_RS09435 16bebc9577b8ccb3f0322cae7a23885c 440 PRINTS PR00688 Xylose isomerase signature 180 201 6.9E-85 T 28-03-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 AM393_RS09435 16bebc9577b8ccb3f0322cae7a23885c 440 PRINTS PR00688 Xylose isomerase signature 207 226 6.9E-85 T 28-03-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 AM393_RS09435 16bebc9577b8ccb3f0322cae7a23885c 440 PRINTS PR00688 Xylose isomerase signature 229 253 6.9E-85 T 28-03-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 AM393_RS09435 16bebc9577b8ccb3f0322cae7a23885c 440 PRINTS PR00688 Xylose isomerase signature 271 298 6.9E-85 T 28-03-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 AM393_RS09435 16bebc9577b8ccb3f0322cae7a23885c 440 PRINTS PR00688 Xylose isomerase signature 300 311 6.9E-85 T 28-03-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 AM393_RS09435 16bebc9577b8ccb3f0322cae7a23885c 440 PRINTS PR00688 Xylose isomerase signature 333 344 6.9E-85 T 28-03-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 AM393_RS09435 16bebc9577b8ccb3f0322cae7a23885c 440 PRINTS PR00688 Xylose isomerase signature 92 114 6.9E-85 T 28-03-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 AM393_RS09435 16bebc9577b8ccb3f0322cae7a23885c 440 Hamap MF_00455 Xylose isomerase [xylA]. 11 437 53.504 T 28-03-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 AM393_RS09435 16bebc9577b8ccb3f0322cae7a23885c 440 TIGRFAM TIGR02630 xylose_isom_A: xylose isomerase 4 437 9.6E-219 T 28-03-2018 IPR013452 Xylose isomerase, bacterial-type GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 AM393_RS09435 16bebc9577b8ccb3f0322cae7a23885c 440 Gene3D G3DSA:3.20.20.150 2 440 1.6E-111 T 28-03-2018 AM393_RS09435 16bebc9577b8ccb3f0322cae7a23885c 440 SUPERFAMILY SSF51658 4 438 3.36E-174 T 28-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AM393_RS10495 b55688848facc1aa33f93d797a01d213 139 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 10 90 9.0E-41 T 28-03-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM393_RS10495 b55688848facc1aa33f93d797a01d213 139 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 4 133 8.8E-48 T 28-03-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM393_RS10495 b55688848facc1aa33f93d797a01d213 139 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 6 84 1.5E-30 T 28-03-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM393_RS10495 b55688848facc1aa33f93d797a01d213 139 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 3 131 21.801 T 28-03-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM393_RS10495 b55688848facc1aa33f93d797a01d213 139 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 89 133 2.7E-13 T 28-03-2018 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM393_RS10495 b55688848facc1aa33f93d797a01d213 139 SUPERFAMILY SSF46604 88 137 1.83E-15 T 28-03-2018 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM393_RS10495 b55688848facc1aa33f93d797a01d213 139 Gene3D G3DSA:2.60.15.10 1 90 1.9E-28 T 28-03-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM393_RS10495 b55688848facc1aa33f93d797a01d213 139 SUPERFAMILY SSF51344 3 86 2.09E-25 T 28-03-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM393_RS10495 b55688848facc1aa33f93d797a01d213 139 Gene3D G3DSA:1.20.5.440 91 131 1.8E-13 T 28-03-2018 AM393_RS20095 4cc1d1f5fe0a9394c19aee1f26ac7582 403 Gene3D G3DSA:3.40.50.1100 76 185 2.6E-29 T 28-03-2018 AM393_RS20095 4cc1d1f5fe0a9394c19aee1f26ac7582 403 Gene3D G3DSA:3.40.50.1100 186 396 1.1E-24 T 28-03-2018 AM393_RS20095 4cc1d1f5fe0a9394c19aee1f26ac7582 403 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 40 384 2.0E-52 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AM393_RS20095 4cc1d1f5fe0a9394c19aee1f26ac7582 403 TIGRFAM TIGR01747 diampropi_NH3ly: diaminopropionate ammonia-lyase family 23 398 1.2E-191 T 28-03-2018 IPR010081 Diaminopropionate ammonia-lyase GO:0008838|GO:0030170 AM393_RS20095 4cc1d1f5fe0a9394c19aee1f26ac7582 403 SUPERFAMILY SSF53686 33 361 3.67E-58 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AM393_RS20095 4cc1d1f5fe0a9394c19aee1f26ac7582 403 TIGRFAM TIGR03528 2_3_DAP_am_ly: diaminopropionate ammonia-lyase 4 400 4.0E-190 T 28-03-2018 IPR019871 Diaminopropionate ammonia-lyase, subgroup GO:0008838 AM393_RS06245 f5c3070645489bd8cdecb2414d121520 360 Hamap MF_01616 Membrane-bound lytic murein transglycosylase C [mltC]. 1 359 64.733 T 28-03-2018 IPR023664 Murein transglycosylase-C GO:0009279|GO:0016798|GO:0016998 AM393_RS06245 f5c3070645489bd8cdecb2414d121520 360 Pfam PF01464 Transglycosylase SLT domain 197 319 1.8E-31 T 28-03-2018 IPR008258 Transglycosylase SLT domain 1 AM393_RS06245 f5c3070645489bd8cdecb2414d121520 360 Gene3D G3DSA:1.10.530.10 183 358 4.9E-35 T 28-03-2018 AM393_RS06245 f5c3070645489bd8cdecb2414d121520 360 Pfam PF11873 Domain of unknown function (DUF3393) 3 192 3.3E-76 T 28-03-2018 IPR024570 Murein transglycosylase-C, N-terminal AM393_RS06245 f5c3070645489bd8cdecb2414d121520 360 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 214 242 - T 28-03-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 AM393_RS06245 f5c3070645489bd8cdecb2414d121520 360 SUPERFAMILY SSF53955 192 358 4.79E-36 T 28-03-2018 IPR023346 Lysozyme-like domain AM393_RS16525 e0cfd6ef3bd9179827e8d2a6fb96adec 354 Gene3D G3DSA:3.40.50.1100 30 140 1.5E-20 T 28-03-2018 AM393_RS16525 e0cfd6ef3bd9179827e8d2a6fb96adec 354 Gene3D G3DSA:3.40.50.1100 141 329 1.3E-38 T 28-03-2018 AM393_RS16525 e0cfd6ef3bd9179827e8d2a6fb96adec 354 SUPERFAMILY SSF53686 20 333 7.46E-69 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AM393_RS16525 e0cfd6ef3bd9179827e8d2a6fb96adec 354 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 22 313 1.0E-43 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AM393_RS10775 70e3c039c449884a447f64fd96a8a35b 300 Gene3D G3DSA:1.20.5.480 257 291 3.1E-22 T 28-03-2018 AM393_RS10775 70e3c039c449884a447f64fd96a8a35b 300 SUPERFAMILY SSF54862 28 272 2.83E-73 T 28-03-2018 AM393_RS10775 70e3c039c449884a447f64fd96a8a35b 300 TIGRFAM TIGR01582 FDH-beta: formate dehydrogenase, beta subunit 7 289 2.8E-146 T 28-03-2018 IPR006470 Formate dehydrogenase iron-sulphur subunit, Proteobacteria GO:0015944|GO:0016021|GO:0045333|GO:0051539 AM393_RS10775 70e3c039c449884a447f64fd96a8a35b 300 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 133 144 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM393_RS10775 70e3c039c449884a447f64fd96a8a35b 300 Gene3D G3DSA:3.30.70.20 14 42 0.0047 T 28-03-2018 AM393_RS10775 70e3c039c449884a447f64fd96a8a35b 300 Gene3D G3DSA:3.30.70.20 114 152 1.7E-16 T 28-03-2018 AM393_RS10775 70e3c039c449884a447f64fd96a8a35b 300 Pfam PF09163 Formate dehydrogenase N, transmembrane 246 288 2.7E-21 T 28-03-2018 IPR015246 Formate dehydrogenase, transmembrane AM393_RS10775 70e3c039c449884a447f64fd96a8a35b 300 PIRSF PIRSF036298 1 300 4.1E-167 T 28-03-2018 IPR014603 Formate dehydrogenase iron-sulphur subunit GO:0015944|GO:0045333|GO:0051539 AM393_RS10775 70e3c039c449884a447f64fd96a8a35b 300 Gene3D G3DSA:3.30.70.20 43 113 1.8E-21 T 28-03-2018 AM393_RS10775 70e3c039c449884a447f64fd96a8a35b 300 Pfam PF13247 4Fe-4S dicluster domain 92 188 3.3E-25 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM393_RS10775 70e3c039c449884a447f64fd96a8a35b 300 Gene3D G3DSA:3.30.70.20 153 256 3.9E-23 T 28-03-2018 AM393_RS07955 e9ff87b2f6cbc07850e519f60813e1f6 98 PRINTS PR01591 DNA-binding protein FIS signature 57 69 7.6E-35 T 28-03-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 AM393_RS07955 e9ff87b2f6cbc07850e519f60813e1f6 98 PRINTS PR01591 DNA-binding protein FIS signature 42 57 7.6E-35 T 28-03-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 AM393_RS07955 e9ff87b2f6cbc07850e519f60813e1f6 98 PRINTS PR01591 DNA-binding protein FIS signature 26 42 7.6E-35 T 28-03-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 AM393_RS07955 e9ff87b2f6cbc07850e519f60813e1f6 98 PRINTS PR01591 DNA-binding protein FIS signature 9 26 7.6E-35 T 28-03-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 AM393_RS07955 e9ff87b2f6cbc07850e519f60813e1f6 98 Pfam PF02954 Bacterial regulatory protein, Fis family 55 95 3.8E-14 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM393_RS07955 e9ff87b2f6cbc07850e519f60813e1f6 98 Gene3D G3DSA:1.10.10.60 1 98 4.2E-27 T 28-03-2018 AM393_RS07955 e9ff87b2f6cbc07850e519f60813e1f6 98 SUPERFAMILY SSF46689 4 98 3.88E-27 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS07955 e9ff87b2f6cbc07850e519f60813e1f6 98 PIRSF PIRSF002097 1 98 4.9E-46 T 28-03-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 AM393_RS07955 e9ff87b2f6cbc07850e519f60813e1f6 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 78 98 8.3E-13 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM393_RS07955 e9ff87b2f6cbc07850e519f60813e1f6 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 61 78 8.3E-13 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM393_RS07955 e9ff87b2f6cbc07850e519f60813e1f6 98 Hamap MF_00166 DNA-binding protein Fis [fis]. 1 98 33.769 T 28-03-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 AM393_RS24495 d417c0ebd9f0e06b98caa77302c670e1 490 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 65 416 1.0E-64 T 28-03-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 AM393_RS24495 d417c0ebd9f0e06b98caa77302c670e1 490 Gene3D G3DSA:3.90.1150.10 371 488 1.1E-25 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM393_RS24495 d417c0ebd9f0e06b98caa77302c670e1 490 SUPERFAMILY SSF53383 16 487 9.14E-120 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM393_RS24495 d417c0ebd9f0e06b98caa77302c670e1 490 Gene3D G3DSA:3.40.640.10 92 370 8.9E-58 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM393_RS24495 d417c0ebd9f0e06b98caa77302c670e1 490 Gene3D G3DSA:1.20.1650.10 5 80 6.6E-15 T 28-03-2018 AM393_RS08770 895aee89be9ba5d20dba3a1190769230 176 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 11 172 1.4E-71 T 28-03-2018 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530 AM393_RS08770 895aee89be9ba5d20dba3a1190769230 176 SUPERFAMILY SSF52540 4 172 4.63E-25 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS08770 895aee89be9ba5d20dba3a1190769230 176 Pfam PF01202 Shikimate kinase 17 170 8.6E-12 T 28-03-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 AM393_RS08770 895aee89be9ba5d20dba3a1190769230 176 Gene3D G3DSA:3.40.50.300 7 176 1.1E-25 T 28-03-2018 AM393_RS19830 e66c269475eefdc1fe2b47279401820a 552 Gene3D G3DSA:3.40.50.300 131 349 0.028 T 28-03-2018 AM393_RS19830 e66c269475eefdc1fe2b47279401820a 552 Gene3D G3DSA:3.40.50.300 1 92 1.0E-11 T 28-03-2018 AM393_RS19830 e66c269475eefdc1fe2b47279401820a 552 SUPERFAMILY SSF52540 1 123 3.97E-14 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS19830 e66c269475eefdc1fe2b47279401820a 552 SUPERFAMILY SSF52540 186 339 3.97E-14 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS19830 e66c269475eefdc1fe2b47279401820a 552 Pfam PF11398 Protein of unknown function (DUF2813) 1 375 9.0E-152 T 28-03-2018 IPR022602 Protein of unknown function DUF2813 AM393_RS02935 e744a1c5270b56dadd71cffa1d82f4d6 94 Gene3D G3DSA:3.30.70.860 15 94 1.9E-32 T 28-03-2018 IPR035571 UPF0234/UPF0381 domain AM393_RS02935 e744a1c5270b56dadd71cffa1d82f4d6 94 TIGRFAM TIGR00743 TIGR00743: conserved hypothetical protein 1 94 1.0E-43 T 28-03-2018 IPR005272 Conserved hypothetical protein CHP00743 AM393_RS02935 e744a1c5270b56dadd71cffa1d82f4d6 94 Pfam PF04175 Protein of unknown function (DUF406) 3 94 1.3E-37 T 28-03-2018 IPR005272 Conserved hypothetical protein CHP00743 AM393_RS23200 6cb022f5154c3ab53e764d3c16d58ad3 416 ProSitePatterns PS00216 Sugar transport proteins signature 1. 91 107 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM393_RS23200 6cb022f5154c3ab53e764d3c16d58ad3 416 Gene3D G3DSA:1.20.1250.20 229 416 3.2E-14 T 28-03-2018 AM393_RS23200 6cb022f5154c3ab53e764d3c16d58ad3 416 Pfam PF07690 Major Facilitator Superfamily 41 260 2.2E-28 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS23200 6cb022f5154c3ab53e764d3c16d58ad3 416 SUPERFAMILY SSF103473 27 412 7.32E-63 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS23200 6cb022f5154c3ab53e764d3c16d58ad3 416 Gene3D G3DSA:1.20.1250.20 29 228 1.3E-33 T 28-03-2018 AM393_RS12750 2f0aeb4d823377ed214e0fc71ea8c118 243 Gene3D G3DSA:3.40.190.10 18 145 3.3E-30 T 28-03-2018 AM393_RS12750 2f0aeb4d823377ed214e0fc71ea8c118 243 SMART SM00079 24 243 0.0076 T 28-03-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 AM393_RS12750 2f0aeb4d823377ed214e0fc71ea8c118 243 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 23 243 9.1E-59 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM393_RS12750 2f0aeb4d823377ed214e0fc71ea8c118 243 SUPERFAMILY SSF53850 1 242 8.7E-61 T 28-03-2018 AM393_RS12750 2f0aeb4d823377ed214e0fc71ea8c118 243 Gene3D G3DSA:3.40.190.10 146 242 7.6E-15 T 28-03-2018 AM393_RS12750 2f0aeb4d823377ed214e0fc71ea8c118 243 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 45 58 - T 28-03-2018 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 AM393_RS12750 2f0aeb4d823377ed214e0fc71ea8c118 243 SMART SM00062 22 243 4.7E-61 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM393_RS03030 cd2bac0c6490834dcedc8bd7ef31fdca 413 PRINTS PR00447 Natural resistance-associated macrophage protein signature 150 171 2.8E-30 T 28-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 AM393_RS03030 cd2bac0c6490834dcedc8bd7ef31fdca 413 PRINTS PR00447 Natural resistance-associated macrophage protein signature 299 318 2.8E-30 T 28-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 AM393_RS03030 cd2bac0c6490834dcedc8bd7ef31fdca 413 PRINTS PR00447 Natural resistance-associated macrophage protein signature 125 144 2.8E-30 T 28-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 AM393_RS03030 cd2bac0c6490834dcedc8bd7ef31fdca 413 PRINTS PR00447 Natural resistance-associated macrophage protein signature 97 123 2.8E-30 T 28-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 AM393_RS03030 cd2bac0c6490834dcedc8bd7ef31fdca 413 PRINTS PR00447 Natural resistance-associated macrophage protein signature 200 223 2.8E-30 T 28-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 AM393_RS03030 cd2bac0c6490834dcedc8bd7ef31fdca 413 TIGRFAM TIGR01197 nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 19 377 1.2E-99 T 28-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 AM393_RS03030 cd2bac0c6490834dcedc8bd7ef31fdca 413 Hamap MF_00221 Divalent metal cation transporter MntH [mntH]. 1 409 38.057 T 28-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 AM393_RS03030 cd2bac0c6490834dcedc8bd7ef31fdca 413 Pfam PF01566 Natural resistance-associated macrophage protein 38 383 4.5E-125 T 28-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 AM393_RS10965 1352be132881f5d9c023f9b3f287290a 161 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 154 4.0E-61 T 28-03-2018 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 AM393_RS10965 1352be132881f5d9c023f9b3f287290a 161 TIGRFAM TIGR02998 RraA_entero: regulator of ribonuclease activity A 1 161 3.7E-89 T 28-03-2018 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 AM393_RS10965 1352be132881f5d9c023f9b3f287290a 161 Hamap MF_00471 Regulator of ribonuclease activity A [rraA]. 1 161 46.819 T 28-03-2018 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 AM393_RS10965 1352be132881f5d9c023f9b3f287290a 161 Gene3D G3DSA:3.50.30.40 1 159 1.6E-35 T 28-03-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein AM393_RS10965 1352be132881f5d9c023f9b3f287290a 161 SUPERFAMILY SSF89562 2 158 2.35E-43 T 28-03-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein AM393_RS10965 1352be132881f5d9c023f9b3f287290a 161 Pfam PF03737 Aldolase/RraA 5 152 8.0E-35 T 28-03-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein AM393_RS09265 eeeef124b0b986c5ad5a21ea63ece6a1 300 Gene3D G3DSA:1.10.3720.10 19 287 7.4E-48 T 28-03-2018 AM393_RS09265 eeeef124b0b986c5ad5a21ea63ece6a1 300 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 299 2.1E-30 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS09265 eeeef124b0b986c5ad5a21ea63ece6a1 300 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 17 69 3.3E-16 T 28-03-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain AM393_RS09265 eeeef124b0b986c5ad5a21ea63ece6a1 300 SUPERFAMILY SSF161098 93 280 5.63E-30 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS28050 046f879cdadfd565cc6f4069aade33c9 262 Pfam PF11412 Disulphide bond corrector protein DsbC 2 64 2.2E-16 T 28-03-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain AM393_RS28050 046f879cdadfd565cc6f4069aade33c9 262 Gene3D G3DSA:2.60.40.1250 1 73 9.7E-18 T 28-03-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain AM393_RS28050 046f879cdadfd565cc6f4069aade33c9 262 Gene3D G3DSA:3.30.360.10 74 262 1.8E-42 T 28-03-2018 AM393_RS28050 046f879cdadfd565cc6f4069aade33c9 262 SUPERFAMILY SSF74863 2 64 1.44E-17 T 28-03-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain AM393_RS16165 8e3900701402815dc1c499feaf1ea330 401 Pfam PF12320 Type 5 capsule protein repressor C-terminal domain 276 373 7.0E-24 T 28-03-2018 IPR026843 Nuclease SbcCD subunit D, C-terminal domain AM393_RS16165 8e3900701402815dc1c499feaf1ea330 401 Gene3D G3DSA:3.60.21.10 1 64 3.9E-16 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like AM393_RS16165 8e3900701402815dc1c499feaf1ea330 401 Gene3D G3DSA:3.60.21.10 65 277 3.8E-23 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like AM393_RS16165 8e3900701402815dc1c499feaf1ea330 401 SUPERFAMILY SSF56300 1 335 4.84E-59 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like AM393_RS16165 8e3900701402815dc1c499feaf1ea330 401 TIGRFAM TIGR00619 sbcd: exonuclease SbcCD, D subunit 1 253 8.3E-83 T 28-03-2018 IPR004593 Nuclease SbcCD subunit D GO:0004519|GO:0006259|GO:0008408 AM393_RS16165 8e3900701402815dc1c499feaf1ea330 401 Pfam PF00149 Calcineurin-like phosphoesterase 1 225 3.8E-15 T 28-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AM393_RS03135 0eb598ec74438087163fc27017f28d66 169 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 22 146 1.7E-49 T 28-03-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 AM393_RS03135 0eb598ec74438087163fc27017f28d66 169 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 23 143 4.5E-51 T 28-03-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 AM393_RS03135 0eb598ec74438087163fc27017f28d66 169 SUPERFAMILY SSF51261 12 167 2.09E-56 T 28-03-2018 IPR011055 Duplicated hybrid motif AM393_RS03135 0eb598ec74438087163fc27017f28d66 169 Gene3D G3DSA:2.70.70.10 9 169 2.8E-59 T 28-03-2018 AM393_RS03135 0eb598ec74438087163fc27017f28d66 169 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 85 97 - T 28-03-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 AM393_RS23005 610931c6f63da79e85957e2f7a9feb6f 187 SMART SM00463 85 169 1.3E-14 T 28-03-2018 IPR002625 Smr domain AM393_RS23005 610931c6f63da79e85957e2f7a9feb6f 187 Pfam PF01713 Smr domain 94 169 1.4E-17 T 28-03-2018 IPR002625 Smr domain AM393_RS23005 610931c6f63da79e85957e2f7a9feb6f 187 SUPERFAMILY SSF160443 88 169 8.5E-11 T 28-03-2018 IPR002625 Smr domain AM393_RS19705 6eea00c159cd3205b2e19bf645414c3a 317 Gene3D G3DSA:1.10.3720.10 30 313 3.0E-42 T 28-03-2018 AM393_RS19705 6eea00c159cd3205b2e19bf645414c3a 317 SUPERFAMILY SSF161098 29 308 4.21E-56 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS19705 6eea00c159cd3205b2e19bf645414c3a 317 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 313 7.0E-24 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS04970 2573f5522aeb5f7c29024c333b2e50e2 455 Gene3D G3DSA:3.40.50.450 124 453 5.3E-102 T 28-03-2018 AM393_RS04970 2573f5522aeb5f7c29024c333b2e50e2 455 Gene3D G3DSA:3.30.1850.10 3 111 1.5E-47 T 28-03-2018 IPR027820 Domain of unknown function DUF4478 AM393_RS04970 2573f5522aeb5f7c29024c333b2e50e2 455 Pfam PF03641 Possible lysine decarboxylase 190 329 1.1E-34 T 28-03-2018 IPR031100 LOG family AM393_RS04970 2573f5522aeb5f7c29024c333b2e50e2 455 SUPERFAMILY SSF102405 118 330 3.82E-43 T 28-03-2018 AM393_RS04970 2573f5522aeb5f7c29024c333b2e50e2 455 Pfam PF14793 Domain of unknown function (DUF4478) 4 109 4.2E-46 T 28-03-2018 IPR027820 Domain of unknown function DUF4478 AM393_RS04970 2573f5522aeb5f7c29024c333b2e50e2 455 Pfam PF11892 Domain of unknown function (DUF3412) 333 454 3.4E-55 T 28-03-2018 IPR021826 Domain of unknown function DUF3412 AM393_RS07375 2a117248a2f4d83f3cca745641e70af9 705 Hamap MF_01890 Penicillin-binding protein activator LpoA [lpoA]. 6 699 36.209 T 28-03-2018 IPR007443 Penicillin-binding protein activator LpoA AM393_RS07375 2a117248a2f4d83f3cca745641e70af9 705 SUPERFAMILY SSF53822 555 703 2.0E-67 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AM393_RS07375 2a117248a2f4d83f3cca745641e70af9 705 SUPERFAMILY SSF53822 386 519 2.0E-67 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AM393_RS07375 2a117248a2f4d83f3cca745641e70af9 705 SUPERFAMILY SSF53822 259 358 1.18E-5 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AM393_RS07375 2a117248a2f4d83f3cca745641e70af9 705 Pfam PF04348 LppC putative lipoprotein 41 318 7.5E-47 T 28-03-2018 IPR007443 Penicillin-binding protein activator LpoA AM393_RS07375 2a117248a2f4d83f3cca745641e70af9 705 Pfam PF04348 LppC putative lipoprotein 386 699 4.9E-85 T 28-03-2018 IPR007443 Penicillin-binding protein activator LpoA AM393_RS07375 2a117248a2f4d83f3cca745641e70af9 705 Gene3D G3DSA:3.40.50.2300 256 535 1.3E-41 T 28-03-2018 AM393_RS07375 2a117248a2f4d83f3cca745641e70af9 705 Gene3D G3DSA:3.40.50.2300 556 692 1.6E-14 T 28-03-2018 AM393_RS04980 4fd716c11b1a4ab3dc30b83c946375ab 455 Pfam PF03315 Serine dehydratase beta chain 3 155 8.5E-56 T 28-03-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 AM393_RS04980 4fd716c11b1a4ab3dc30b83c946375ab 455 Pfam PF03313 Serine dehydratase alpha chain 184 448 4.7E-94 T 28-03-2018 IPR005130 Serine dehydratase-like, alpha subunit AM393_RS04980 4fd716c11b1a4ab3dc30b83c946375ab 455 SUPERFAMILY SSF143548 16 158 1.91E-45 T 28-03-2018 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 AM393_RS04980 4fd716c11b1a4ab3dc30b83c946375ab 455 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 2 451 1.7E-220 T 28-03-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 AM393_RS04980 4fd716c11b1a4ab3dc30b83c946375ab 455 Gene3D G3DSA:1.10.4100.10 245 445 1.5E-34 T 28-03-2018 AM393_RS04980 4fd716c11b1a4ab3dc30b83c946375ab 455 Gene3D G3DSA:3.30.1330.90 10 158 4.8E-51 T 28-03-2018 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 AM393_RS05750 5cdd0428af6aea36bbde185fe3e506c4 99 SUPERFAMILY SSF140670 3 99 3.27E-52 T 28-03-2018 AM393_RS05750 5cdd0428af6aea36bbde185fe3e506c4 99 Pfam PF08986 Domain of unknown function (DUF1889) 1 99 1.5E-45 T 28-03-2018 IPR015079 Protein of unknown function DUF1889 AM393_RS22920 bc23131fffa15111d18ccc7cce4851a8 111 Pfam PF06942 GlpM protein 5 111 5.3E-51 T 28-03-2018 IPR009707 Membrane protein GlpM/YdgC AM393_RS22920 bc23131fffa15111d18ccc7cce4851a8 111 ProDom PD028709 MEMBRANE INNER YDGC GLPM ALGINATE BIOSYNTHESIS TRANSMEMBRANE REQUIRED FOR UNCHARACTERIZED 23 111 1.0E-35 T 28-03-2018 IPR009707 Membrane protein GlpM/YdgC AM393_RS23760 26c7ad126caf09f67d604568cbf42111 166 Pfam PF09349 OHCU decarboxylase 8 161 6.8E-39 T 28-03-2018 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 AM393_RS23760 26c7ad126caf09f67d604568cbf42111 166 Gene3D G3DSA:1.10.3330.10 1 166 3.6E-48 T 28-03-2018 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 AM393_RS23760 26c7ad126caf09f67d604568cbf42111 166 SUPERFAMILY SSF158694 4 163 1.83E-44 T 28-03-2018 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 AM393_RS23760 26c7ad126caf09f67d604568cbf42111 166 TIGRFAM TIGR03180 UraD_2: OHCU decarboxylase 7 164 1.8E-65 T 28-03-2018 IPR017595 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase, type 2 AM393_RS15925 97feb1a7dfcd49daed6e42580d77b15c 195 Pfam PF16449 Fimbrillin MatB 26 193 2.0E-87 T 28-03-2018 IPR016514 Fimbrial protein MatB AM393_RS15925 97feb1a7dfcd49daed6e42580d77b15c 195 PIRSF PIRSF007320 1 195 3.9E-114 T 28-03-2018 IPR016514 Fimbrial protein MatB AM393_RS00800 54bfbb203160e976daf760afc1763a1e 169 Pfam PF00210 Ferritin-like domain 8 142 2.0E-18 T 28-03-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 AM393_RS00800 54bfbb203160e976daf760afc1763a1e 169 SUPERFAMILY SSF47240 7 158 1.98E-27 T 28-03-2018 IPR009078 Ferritin-like superfamily AM393_RS00800 54bfbb203160e976daf760afc1763a1e 169 Gene3D G3DSA:1.20.1260.10 2 169 6.2E-21 T 28-03-2018 IPR012347 Ferritin-related AM393_RS14950 9f22ce91563205bed1cde2f7a4867dc9 316 Pfam PF04616 Glycosyl hydrolases family 43 5 306 8.6E-77 T 28-03-2018 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 AM393_RS14950 9f22ce91563205bed1cde2f7a4867dc9 316 PIRSF PIRSF025414 1 316 1.9E-143 T 28-03-2018 IPR016828 Alpha-L-arabinofuranosidase KEGG: 00520+3.2.1.55 AM393_RS14950 9f22ce91563205bed1cde2f7a4867dc9 316 SUPERFAMILY SSF75005 5 311 2.54E-67 T 28-03-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain AM393_RS14950 9f22ce91563205bed1cde2f7a4867dc9 316 Gene3D G3DSA:2.115.10.20 1 315 1.1E-61 T 28-03-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain AM393_RS25320 6866a1de2bf8ce17e2ebef355c21257d 790 Pfam PF13360 PQQ-like domain 664 752 1.6E-5 T 28-03-2018 IPR002372 Pyrrolo-quinoline quinone repeat AM393_RS25320 6866a1de2bf8ce17e2ebef355c21257d 790 Gene3D G3DSA:2.140.10.10 658 779 1.6E-10 T 28-03-2018 AM393_RS25320 6866a1de2bf8ce17e2ebef355c21257d 790 Gene3D G3DSA:2.140.10.10 157 611 7.4E-90 T 28-03-2018 AM393_RS25320 6866a1de2bf8ce17e2ebef355c21257d 790 SMART SM00564 219 250 0.01 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AM393_RS25320 6866a1de2bf8ce17e2ebef355c21257d 790 SMART SM00564 408 457 46.0 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AM393_RS25320 6866a1de2bf8ce17e2ebef355c21257d 790 SMART SM00564 281 313 52.0 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AM393_RS25320 6866a1de2bf8ce17e2ebef355c21257d 790 SMART SM00564 338 379 1.2 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AM393_RS25320 6866a1de2bf8ce17e2ebef355c21257d 790 SMART SM00564 710 742 0.0087 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AM393_RS25320 6866a1de2bf8ce17e2ebef355c21257d 790 SMART SM00564 481 512 420.0 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AM393_RS25320 6866a1de2bf8ce17e2ebef355c21257d 790 SMART SM00564 634 681 110.0 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AM393_RS25320 6866a1de2bf8ce17e2ebef355c21257d 790 TIGRFAM TIGR03074 PQQ_membr_DH: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family 17 787 0.0 T 28-03-2018 IPR017511 PQQ-dependent membrane bound dehydrogenase GO:0016021|GO:0016614|GO:0048038|GO:0055114 AM393_RS25320 6866a1de2bf8ce17e2ebef355c21257d 790 SUPERFAMILY SSF50998 164 521 1.57E-149 T 28-03-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AM393_RS25320 6866a1de2bf8ce17e2ebef355c21257d 790 SUPERFAMILY SSF50998 558 772 1.57E-149 T 28-03-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AM393_RS25320 6866a1de2bf8ce17e2ebef355c21257d 790 ProSitePatterns PS00364 Bacterial quinoprotein dehydrogenases signature 2. 403 424 - T 28-03-2018 IPR001479 Quinoprotein dehydrogenase, conserved site GO:0030288|GO:0055114 AM393_RS25320 6866a1de2bf8ce17e2ebef355c21257d 790 Pfam PF01011 PQQ enzyme repeat 224 253 5.6E-5 T 28-03-2018 IPR002372 Pyrrolo-quinoline quinone repeat AM393_RS25320 6866a1de2bf8ce17e2ebef355c21257d 790 Pfam PF01011 PQQ enzyme repeat 441 467 1.1E-6 T 28-03-2018 IPR002372 Pyrrolo-quinoline quinone repeat AM393_RS18325 f2d49166646cb06d0b1acaeeb18ab204 105 Gene3D G3DSA:3.30.460.10 1 105 3.1E-35 T 28-03-2018 AM393_RS18325 f2d49166646cb06d0b1acaeeb18ab204 105 SUPERFAMILY SSF81301 4 105 3.76E-37 T 28-03-2018 AM393_RS18325 f2d49166646cb06d0b1acaeeb18ab204 105 Pfam PF02410 Ribosomal silencing factor during starvation 10 104 1.3E-28 T 28-03-2018 AM393_RS18325 f2d49166646cb06d0b1acaeeb18ab204 105 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 8 104 8.1E-38 T 28-03-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS AM393_RS18325 f2d49166646cb06d0b1acaeeb18ab204 105 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 3 105 24.292 T 28-03-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS AM393_RS08160 e6aaca396c9d234449a5aec8d230a4b7 315 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 136 159 - T 28-03-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AM393_RS08160 e6aaca396c9d234449a5aec8d230a4b7 315 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 5 308 1.7E-119 T 28-03-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 AM393_RS08160 e6aaca396c9d234449a5aec8d230a4b7 315 Gene3D G3DSA:3.10.25.10 210 312 1.2E-34 T 28-03-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AM393_RS08160 e6aaca396c9d234449a5aec8d230a4b7 315 Pfam PF00551 Formyl transferase 6 183 8.0E-54 T 28-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AM393_RS08160 e6aaca396c9d234449a5aec8d230a4b7 315 Gene3D G3DSA:3.40.50.170 2 209 2.1E-67 T 28-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AM393_RS08160 e6aaca396c9d234449a5aec8d230a4b7 315 Pfam PF02911 Formyl transferase, C-terminal domain 207 304 3.8E-32 T 28-03-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AM393_RS08160 e6aaca396c9d234449a5aec8d230a4b7 315 SUPERFAMILY SSF50486 208 309 4.4E-37 T 28-03-2018 IPR011034 Formyl transferase, C-terminal-like GO:0003824 AM393_RS08160 e6aaca396c9d234449a5aec8d230a4b7 315 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 5 307 37.41 T 28-03-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 AM393_RS08160 e6aaca396c9d234449a5aec8d230a4b7 315 SUPERFAMILY SSF53328 5 206 1.7E-66 T 28-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AM393_RS03000 c1231a73ae849eedebaa41e0e2358c7c 245 SMART SM00448 1 112 6.9E-21 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM393_RS03000 c1231a73ae849eedebaa41e0e2358c7c 245 Gene3D G3DSA:2.40.50.40 136 206 1.2E-15 T 28-03-2018 AM393_RS03000 c1231a73ae849eedebaa41e0e2358c7c 245 SUPERFAMILY SSF52172 1 144 6.12E-26 T 28-03-2018 IPR011006 CheY-like superfamily AM393_RS03000 c1231a73ae849eedebaa41e0e2358c7c 245 Pfam PF00072 Response regulator receiver domain 3 112 7.9E-24 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM393_RS03000 c1231a73ae849eedebaa41e0e2358c7c 245 Gene3D G3DSA:2.20.25.10 207 244 2.4E-17 T 28-03-2018 AM393_RS03000 c1231a73ae849eedebaa41e0e2358c7c 245 Pfam PF04397 LytTr DNA-binding domain 147 243 3.6E-31 T 28-03-2018 IPR007492 LytTR DNA-binding domain GO:0003677 AM393_RS03000 c1231a73ae849eedebaa41e0e2358c7c 245 SMART SM00850 146 244 3.5E-36 T 28-03-2018 IPR007492 LytTR DNA-binding domain GO:0003677 AM393_RS03000 c1231a73ae849eedebaa41e0e2358c7c 245 Gene3D G3DSA:3.40.50.2300 1 132 3.1E-24 T 28-03-2018 AM393_RS01990 e5a55b906962a205880dd7bbdbaeaf44 603 Pfam PF01979 Amidohydrolase family 73 355 1.8E-20 T 28-03-2018 IPR006680 Amidohydrolase-related GO:0016787 AM393_RS01990 e5a55b906962a205880dd7bbdbaeaf44 603 SUPERFAMILY SSF51556 76 326 1.57E-18 T 28-03-2018 IPR032466 Metal-dependent hydrolase AM393_RS01990 e5a55b906962a205880dd7bbdbaeaf44 603 SUPERFAMILY SSF51338 13 76 2.73E-16 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM393_RS01990 e5a55b906962a205880dd7bbdbaeaf44 603 SUPERFAMILY SSF51338 326 368 2.73E-16 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM393_RS01990 e5a55b906962a205880dd7bbdbaeaf44 603 Gene3D G3DSA:3.20.20.140 82 254 3.2E-9 T 28-03-2018 AM393_RS01990 e5a55b906962a205880dd7bbdbaeaf44 603 Gene3D G3DSA:2.30.40.10 268 365 7.9E-13 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM393_RS01990 e5a55b906962a205880dd7bbdbaeaf44 603 Hamap MF_01518 Adenine deaminase [ade]. 22 582 29.988 T 28-03-2018 IPR006679 Adenine deaminase GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 AM393_RS01990 e5a55b906962a205880dd7bbdbaeaf44 603 Pfam PF13382 Adenine deaminase C-terminal domain 412 577 2.4E-41 T 28-03-2018 IPR026912 Adenine deaminase C-terminal domain KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 AM393_RS01990 e5a55b906962a205880dd7bbdbaeaf44 603 Gene3D G3DSA:2.30.40.10 19 81 6.5E-14 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM393_RS05610 db680db1e6530c398be785608471c122 238 Pfam PF00563 EAL domain 17 223 6.9E-28 T 28-03-2018 IPR001633 EAL domain AM393_RS05610 db680db1e6530c398be785608471c122 238 SUPERFAMILY SSF141868 19 223 7.45E-28 T 28-03-2018 IPR001633 EAL domain AM393_RS05610 db680db1e6530c398be785608471c122 238 Gene3D G3DSA:3.20.20.450 8 233 3.0E-29 T 28-03-2018 IPR001633 EAL domain AM393_RS05610 db680db1e6530c398be785608471c122 238 SMART SM00052 8 230 4.7E-8 T 28-03-2018 IPR001633 EAL domain AM393_RS13380 2370af1d74dfdd1dc600e53da2b8a1ce 646 Gene3D G3DSA:3.40.50.970 2 211 4.9E-48 T 28-03-2018 AM393_RS13380 2370af1d74dfdd1dc600e53da2b8a1ce 646 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 7 196 4.9E-34 T 28-03-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 AM393_RS13380 2370af1d74dfdd1dc600e53da2b8a1ce 646 SUPERFAMILY SSF52518 3 208 4.03E-33 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold AM393_RS13380 2370af1d74dfdd1dc600e53da2b8a1ce 646 Gene3D G3DSA:3.40.50.1220 212 410 2.1E-39 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AM393_RS13380 2370af1d74dfdd1dc600e53da2b8a1ce 646 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 478 497 - T 28-03-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 AM393_RS13380 2370af1d74dfdd1dc600e53da2b8a1ce 646 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 220 353 8.0E-32 T 28-03-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 AM393_RS13380 2370af1d74dfdd1dc600e53da2b8a1ce 646 SUPERFAMILY SSF52467 185 367 9.0E-42 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AM393_RS13380 2370af1d74dfdd1dc600e53da2b8a1ce 646 TIGRFAM TIGR04377 myo_inos_iolD: 3,5/4-trihydroxycyclohexa-1,2-dione hydrolase 5 644 6.9E-289 T 28-03-2018 IPR030817 3,5/4-Trihydroxycyclohexa-1,2-dione hydrolase GO:0016823|GO:0019310|GO:0030976 KEGG: 00562+3.7.1.22 AM393_RS13380 2370af1d74dfdd1dc600e53da2b8a1ce 646 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 442 601 2.3E-38 T 28-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AM393_RS13380 2370af1d74dfdd1dc600e53da2b8a1ce 646 Gene3D G3DSA:3.40.50.970 411 617 2.0E-35 T 28-03-2018 AM393_RS13380 2370af1d74dfdd1dc600e53da2b8a1ce 646 SUPERFAMILY SSF52518 419 630 2.66E-51 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold AM393_RS23800 8a4f4089599cd9609437833752eeecbe 187 SUPERFAMILY SSF49401 29 187 1.49E-27 T 28-03-2018 IPR008966 Adhesion domain AM393_RS23800 8a4f4089599cd9609437833752eeecbe 187 Pfam PF00419 Fimbrial protein 31 186 3.1E-18 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM393_RS23800 8a4f4089599cd9609437833752eeecbe 187 Gene3D G3DSA:2.60.40.1090 28 187 1.0E-32 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM393_RS28105 8c5305372664a26ff2ef348e3c371777 155 Pfam PF02387 IncFII RepA protein family 3 145 2.0E-13 T 28-03-2018 IPR003446 Plasmid replication initiation, RepA GO:0006276 AM393_RS14340 17c3b70406f19ee781e341bd74e0ebd3 22 Hamap MF_01907 thr operon leader peptide [thrL]. 1 22 11.501 T 28-03-2018 IPR011720 Thr operon leader peptide GO:0009088|GO:0031554|GO:0031556 AM393_RS14340 17c3b70406f19ee781e341bd74e0ebd3 22 TIGRFAM TIGR02077 thr_lead_pep: thr operon leader peptide 1 22 5.8E-7 T 28-03-2018 IPR011720 Thr operon leader peptide GO:0009088|GO:0031554|GO:0031556 AM393_RS14340 17c3b70406f19ee781e341bd74e0ebd3 22 Pfam PF08254 Threonine leader peptide 1 22 3.9E-12 T 28-03-2018 IPR011720 Thr operon leader peptide GO:0009088|GO:0031554|GO:0031556 AM393_RS15290 0ae43fc5ba34a8464596bf959df8a27b 385 Gene3D G3DSA:1.10.10.60 308 359 8.4E-6 T 28-03-2018 AM393_RS15290 0ae43fc5ba34a8464596bf959df8a27b 385 Pfam PF05651 Putative sugar diacid recognition 6 138 5.5E-49 T 28-03-2018 IPR008599 Putative sugar diacid recognition AM393_RS15290 0ae43fc5ba34a8464596bf959df8a27b 385 Pfam PF13556 PucR C-terminal helix-turn-helix domain 323 380 2.3E-22 T 28-03-2018 IPR025736 PucR C-terminal helix-turn-helix domain AM393_RS01470 2fd2125fc2bd9d590a4474f620396e51 81 Pfam PF11183 Polymyxin resistance protein PmrD 1 81 3.4E-38 T 28-03-2018 AM393_RS01470 2fd2125fc2bd9d590a4474f620396e51 81 ProDom PD028730 PMRD RESISTANCE POLYMYXIN B ANTIBIOTIC 1 76 2.0E-8 T 28-03-2018 IPR020146 Signal transduction protein PmrD AM393_RS26975 415d0be2ba199b4e2b50769401e5b766 880 SUPERFAMILY SSF52540 443 769 2.13E-33 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS26975 415d0be2ba199b4e2b50769401e5b766 880 Pfam PF11130 F pilus assembly Type-IV secretion system for plasmid transfer 39 278 2.1E-50 T 28-03-2018 IPR025955 Type-IV secretion system protein TraC/Conjugative transfer ATPase AM393_RS26975 415d0be2ba199b4e2b50769401e5b766 880 TIGRFAM TIGR02746 TraC-F-type: type-IV secretion system protein TraC 45 855 2.5E-259 T 28-03-2018 IPR014117 Type-IV secretion system protein TraC AM393_RS26975 415d0be2ba199b4e2b50769401e5b766 880 Gene3D G3DSA:3.40.50.300 376 789 1.4E-14 T 28-03-2018 AM393_RS02260 ac592a6c4cfd4fb0fd002fabbd077741 190 PIRSF PIRSF005901 1 190 5.6E-61 T 28-03-2018 IPR020599 Translation elongation factor P/YeiP AM393_RS02260 ac592a6c4cfd4fb0fd002fabbd077741 190 Gene3D G3DSA:2.40.50.140 133 188 1.1E-20 T 28-03-2018 AM393_RS02260 ac592a6c4cfd4fb0fd002fabbd077741 190 SUPERFAMILY SSF50249 132 189 4.63E-15 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM393_RS02260 ac592a6c4cfd4fb0fd002fabbd077741 190 Pfam PF09285 Elongation factor P, C-terminal 133 188 6.7E-19 T 28-03-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 AM393_RS02260 ac592a6c4cfd4fb0fd002fabbd077741 190 Gene3D G3DSA:2.30.30.30 2 63 1.6E-15 T 28-03-2018 IPR014722 Ribosomal protein L2 domain 2 AM393_RS02260 ac592a6c4cfd4fb0fd002fabbd077741 190 ProSitePatterns PS01275 Elongation factor P signature. 154 173 - T 28-03-2018 IPR013852 Translation elongation factor P/YeiP, conserved site AM393_RS02260 ac592a6c4cfd4fb0fd002fabbd077741 190 SUPERFAMILY SSF50249 68 130 2.74E-11 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM393_RS02260 ac592a6c4cfd4fb0fd002fabbd077741 190 SMART SM01185 69 125 2.0E-14 T 28-03-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 AM393_RS02260 ac592a6c4cfd4fb0fd002fabbd077741 190 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 4 62 5.6E-16 T 28-03-2018 IPR013185 Translation elongation factor, KOW-like AM393_RS02260 ac592a6c4cfd4fb0fd002fabbd077741 190 Pfam PF01132 Elongation factor P (EF-P) OB domain 72 124 5.5E-14 T 28-03-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 AM393_RS02260 ac592a6c4cfd4fb0fd002fabbd077741 190 Gene3D G3DSA:2.40.50.140 66 131 6.6E-16 T 28-03-2018 AM393_RS02260 ac592a6c4cfd4fb0fd002fabbd077741 190 TIGRFAM TIGR02178 yeiP: elongation factor P-like protein YeiP 3 189 2.3E-99 T 28-03-2018 IPR011897 Translation elongation factor P-like, YeiP AM393_RS02260 ac592a6c4cfd4fb0fd002fabbd077741 190 Hamap MF_00646 Elongation factor P-like protein [yeiP]. 2 189 42.646 T 28-03-2018 IPR011897 Translation elongation factor P-like, YeiP AM393_RS02260 ac592a6c4cfd4fb0fd002fabbd077741 190 SUPERFAMILY SSF50104 1 65 3.49E-11 T 28-03-2018 IPR008991 Translation protein SH3-like domain AM393_RS02260 ac592a6c4cfd4fb0fd002fabbd077741 190 SMART SM00841 133 188 1.4E-27 T 28-03-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 AM393_RS05910 db8412608c43d22da5ffbd6781b66a2a 669 ProSitePatterns PS00194 Thioredoxin family active site. 575 593 - T 28-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AM393_RS05910 db8412608c43d22da5ffbd6781b66a2a 669 Gene3D G3DSA:3.40.30.10 539 650 3.3E-8 T 28-03-2018 AM393_RS05910 db8412608c43d22da5ffbd6781b66a2a 669 Pfam PF11412 Disulphide bond corrector protein DsbC 43 145 7.5E-17 T 28-03-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain AM393_RS05910 db8412608c43d22da5ffbd6781b66a2a 669 Gene3D G3DSA:2.60.40.1250 17 151 1.9E-6 T 28-03-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain AM393_RS05910 db8412608c43d22da5ffbd6781b66a2a 669 SUPERFAMILY SSF52833 552 662 2.48E-10 T 28-03-2018 IPR012336 Thioredoxin-like fold AM393_RS05910 db8412608c43d22da5ffbd6781b66a2a 669 Pfam PF13899 Thioredoxin-like 556 641 2.0E-12 T 28-03-2018 AM393_RS05910 db8412608c43d22da5ffbd6781b66a2a 669 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 281 482 6.3E-9 T 28-03-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 AM393_RS23215 169b029b127afa3f78d2eb348aeec38e 231 SUPERFAMILY SSF52540 1 212 5.69E-54 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS23215 169b029b127afa3f78d2eb348aeec38e 231 PIRSF PIRSF006755 1 225 2.6E-62 T 28-03-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 AM393_RS23215 169b029b127afa3f78d2eb348aeec38e 231 Gene3D G3DSA:3.40.50.300 2 216 2.5E-46 T 28-03-2018 AM393_RS23215 169b029b127afa3f78d2eb348aeec38e 231 Pfam PF13500 AAA domain 4 207 3.2E-29 T 28-03-2018 AM393_RS23215 169b029b127afa3f78d2eb348aeec38e 231 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 6 172 3.3E-39 T 28-03-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 AM393_RS23215 169b029b127afa3f78d2eb348aeec38e 231 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 2 214 23.664 T 28-03-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 AM393_RS09190 e15822380f9476f4233355c210efe9cb 243 Pfam PF06564 Cellulose biosynthesis protein BcsQ 1 234 1.1E-107 T 28-03-2018 IPR017746 Cellulose synthase operon protein BcsQ AM393_RS09190 e15822380f9476f4233355c210efe9cb 243 SUPERFAMILY SSF52540 3 233 4.62E-29 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS09190 e15822380f9476f4233355c210efe9cb 243 TIGRFAM TIGR03371 cellulose_yhjQ: cellulose synthase operon protein YhjQ 1 237 3.5E-74 T 28-03-2018 IPR017746 Cellulose synthase operon protein BcsQ AM393_RS09190 e15822380f9476f4233355c210efe9cb 243 Gene3D G3DSA:3.40.50.300 3 236 4.0E-28 T 28-03-2018 AM393_RS01055 0e6a3568a07055849c73d1d009808d33 316 PRINTS PR00690 Adhesin family signature 274 293 2.1E-31 T 28-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 AM393_RS01055 0e6a3568a07055849c73d1d009808d33 316 PRINTS PR00690 Adhesin family signature 72 89 2.1E-31 T 28-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 AM393_RS01055 0e6a3568a07055849c73d1d009808d33 316 PRINTS PR00690 Adhesin family signature 28 46 2.1E-31 T 28-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 AM393_RS01055 0e6a3568a07055849c73d1d009808d33 316 PRINTS PR00690 Adhesin family signature 195 216 2.1E-31 T 28-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 AM393_RS01055 0e6a3568a07055849c73d1d009808d33 316 PRINTS PR00690 Adhesin family signature 248 266 2.1E-31 T 28-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 AM393_RS01055 0e6a3568a07055849c73d1d009808d33 316 PRINTS PR00690 Adhesin family signature 59 72 2.1E-31 T 28-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 AM393_RS01055 0e6a3568a07055849c73d1d009808d33 316 Pfam PF01297 Zinc-uptake complex component A periplasmic 31 307 4.6E-78 T 28-03-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 AM393_RS01055 0e6a3568a07055849c73d1d009808d33 316 SUPERFAMILY SSF53807 20 307 1.03E-82 T 28-03-2018 AM393_RS01055 0e6a3568a07055849c73d1d009808d33 316 PRINTS PR00691 Adhesin B signature 53 71 5.6E-33 T 28-03-2018 IPR006129 Adhesin B GO:0007155 AM393_RS01055 0e6a3568a07055849c73d1d009808d33 316 PRINTS PR00691 Adhesin B signature 28 49 5.6E-33 T 28-03-2018 IPR006129 Adhesin B GO:0007155 AM393_RS01055 0e6a3568a07055849c73d1d009808d33 316 PRINTS PR00691 Adhesin B signature 137 156 5.6E-33 T 28-03-2018 IPR006129 Adhesin B GO:0007155 AM393_RS01055 0e6a3568a07055849c73d1d009808d33 316 PRINTS PR00691 Adhesin B signature 72 91 5.6E-33 T 28-03-2018 IPR006129 Adhesin B GO:0007155 AM393_RS01055 0e6a3568a07055849c73d1d009808d33 316 PRINTS PR00691 Adhesin B signature 244 261 5.6E-33 T 28-03-2018 IPR006129 Adhesin B GO:0007155 AM393_RS01055 0e6a3568a07055849c73d1d009808d33 316 PRINTS PR00691 Adhesin B signature 266 284 5.6E-33 T 28-03-2018 IPR006129 Adhesin B GO:0007155 AM393_RS01055 0e6a3568a07055849c73d1d009808d33 316 PRINTS PR00691 Adhesin B signature 195 212 5.6E-33 T 28-03-2018 IPR006129 Adhesin B GO:0007155 AM393_RS01055 0e6a3568a07055849c73d1d009808d33 316 PRINTS PR00691 Adhesin B signature 287 305 5.6E-33 T 28-03-2018 IPR006129 Adhesin B GO:0007155 AM393_RS01055 0e6a3568a07055849c73d1d009808d33 316 Gene3D G3DSA:3.40.50.1980 188 307 1.7E-39 T 28-03-2018 AM393_RS01055 0e6a3568a07055849c73d1d009808d33 316 Gene3D G3DSA:3.40.50.1980 28 187 4.9E-43 T 28-03-2018 AM393_RS04770 817df37f0e4bff306342d53a5fae579b 197 Pfam PF02441 Flavoprotein 1 164 3.1E-24 T 28-03-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 AM393_RS04770 817df37f0e4bff306342d53a5fae579b 197 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 2 183 6.6E-73 T 28-03-2018 IPR004507 Flavin prenyltransferase UbiX/Pad1 AM393_RS04770 817df37f0e4bff306342d53a5fae579b 197 SUPERFAMILY SSF52507 1 185 1.83E-62 T 28-03-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 AM393_RS04770 817df37f0e4bff306342d53a5fae579b 197 Gene3D G3DSA:3.40.50.1950 1 197 1.5E-54 T 28-03-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 AM393_RS04770 817df37f0e4bff306342d53a5fae579b 197 Hamap MF_01986 Probable UbiX-like flavin prenyltransferase. 1 189 52.613 T 28-03-2018 IPR032901 Probable UbiX-like flavin prenyltransferase AM393_RS04770 817df37f0e4bff306342d53a5fae579b 197 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 1 185 36.158 T 28-03-2018 IPR004507 Flavin prenyltransferase UbiX/Pad1 AM393_RS21220 c93ce63d7aba127df7d018f733008b1c 103 Gene3D G3DSA:3.30.70.100 1 98 5.2E-5 T 28-03-2018 AM393_RS21220 c93ce63d7aba127df7d018f733008b1c 103 SUPERFAMILY SSF54909 1 79 3.82E-6 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel AM393_RS25545 ae4ea760e06de28c2881e1c8f6f3d3e6 193 SUPERFAMILY SSF46609 1 84 2.75E-36 T 28-03-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AM393_RS25545 ae4ea760e06de28c2881e1c8f6f3d3e6 193 Gene3D G3DSA:1.10.287.990 20 82 5.6E-28 T 28-03-2018 AM393_RS25545 ae4ea760e06de28c2881e1c8f6f3d3e6 193 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 9.7E-22 T 28-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AM393_RS25545 ae4ea760e06de28c2881e1c8f6f3d3e6 193 PRINTS PR01703 Manganese superoxide dismutase signature 155 167 9.7E-22 T 28-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AM393_RS25545 ae4ea760e06de28c2881e1c8f6f3d3e6 193 PRINTS PR01703 Manganese superoxide dismutase signature 118 126 9.7E-22 T 28-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AM393_RS25545 ae4ea760e06de28c2881e1c8f6f3d3e6 193 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 9.7E-22 T 28-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AM393_RS25545 ae4ea760e06de28c2881e1c8f6f3d3e6 193 PRINTS PR01703 Manganese superoxide dismutase signature 65 78 9.7E-22 T 28-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AM393_RS25545 ae4ea760e06de28c2881e1c8f6f3d3e6 193 PIRSF PIRSF000349 1 193 9.8E-86 T 28-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AM393_RS25545 ae4ea760e06de28c2881e1c8f6f3d3e6 193 SUPERFAMILY SSF54719 82 191 3.27E-44 T 28-03-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AM393_RS25545 ae4ea760e06de28c2881e1c8f6f3d3e6 193 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 2 82 2.9E-35 T 28-03-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AM393_RS25545 ae4ea760e06de28c2881e1c8f6f3d3e6 193 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 89 189 1.2E-39 T 28-03-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AM393_RS25545 ae4ea760e06de28c2881e1c8f6f3d3e6 193 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 157 164 - T 28-03-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AM393_RS26945 41293a08fc299241bdbaf67325315aaa 651 Pfam PF06986 Type-1V conjugative transfer system mating pair stabilisation 355 600 2.1E-83 T 28-03-2018 IPR014121 Type-F conjugative transfer system mating-pair stabilisation protein TraN AM393_RS26945 41293a08fc299241bdbaf67325315aaa 651 TIGRFAM TIGR02750 TraN_Ftype: type-F conjugative transfer system mating-pair stabilization protein TraN 14 640 2.1E-153 T 28-03-2018 IPR014121 Type-F conjugative transfer system mating-pair stabilisation protein TraN AM393_RS06145 a07a25530c56f0608b421375928cde6b 384 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 5 380 7.5E-201 T 28-03-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AM393_RS06145 a07a25530c56f0608b421375928cde6b 384 Gene3D G3DSA:3.30.300.10 11 133 1.3E-44 T 28-03-2018 AM393_RS06145 a07a25530c56f0608b421375928cde6b 384 SUPERFAMILY SSF55973 112 232 9.42E-52 T 28-03-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AM393_RS06145 a07a25530c56f0608b421375928cde6b 384 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 259 267 - T 28-03-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AM393_RS06145 a07a25530c56f0608b421375928cde6b 384 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 2 381 60.082 T 28-03-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AM393_RS06145 a07a25530c56f0608b421375928cde6b 384 Gene3D G3DSA:3.30.300.10 134 233 6.0E-43 T 28-03-2018 AM393_RS06145 a07a25530c56f0608b421375928cde6b 384 SUPERFAMILY SSF55973 233 382 1.57E-71 T 28-03-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AM393_RS06145 a07a25530c56f0608b421375928cde6b 384 Pfam PF02772 S-adenosylmethionine synthetase, central domain 114 231 3.3E-45 T 28-03-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AM393_RS06145 a07a25530c56f0608b421375928cde6b 384 PIRSF PIRSF000497 1 382 1.1E-175 T 28-03-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AM393_RS06145 a07a25530c56f0608b421375928cde6b 384 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 4 101 5.1E-43 T 28-03-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AM393_RS06145 a07a25530c56f0608b421375928cde6b 384 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 116 126 - T 28-03-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AM393_RS06145 a07a25530c56f0608b421375928cde6b 384 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 233 370 6.3E-70 T 28-03-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AM393_RS06145 a07a25530c56f0608b421375928cde6b 384 Gene3D G3DSA:3.30.300.10 246 383 4.9E-50 T 28-03-2018 AM393_RS06145 a07a25530c56f0608b421375928cde6b 384 SUPERFAMILY SSF55973 3 109 1.29E-47 T 28-03-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AM393_RS22665 d73c255b33f8ffaf2045912f8ce4c0bc 251 Gene3D G3DSA:1.20.1260.10 4 251 1.3E-73 T 28-03-2018 IPR012347 Ferritin-related AM393_RS22665 d73c255b33f8ffaf2045912f8ce4c0bc 251 TIGRFAM TIGR02158 PA_CoA_Oxy3: phenylacetate-CoA oxygenase, PaaI subunit 14 251 1.6E-99 T 28-03-2018 IPR011882 1,2-phenylacetyl-CoA epoxidase, subunit C GO:0010124 AM393_RS22665 d73c255b33f8ffaf2045912f8ce4c0bc 251 PIRSF PIRSF037834 1 251 8.9E-101 T 28-03-2018 IPR011882 1,2-phenylacetyl-CoA epoxidase, subunit C GO:0010124 AM393_RS22665 d73c255b33f8ffaf2045912f8ce4c0bc 251 SUPERFAMILY SSF47240 7 245 5.14E-83 T 28-03-2018 IPR009078 Ferritin-like superfamily AM393_RS22665 d73c255b33f8ffaf2045912f8ce4c0bc 251 Pfam PF05138 Phenylacetic acid catabolic protein 5 251 1.2E-95 T 28-03-2018 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C GO:0010124 AM393_RS01645 8dba00c94ebfccbb3abfa6c41803ee46 299 Gene3D G3DSA:3.30.70.120 227 298 1.6E-25 T 28-03-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal AM393_RS01645 8dba00c94ebfccbb3abfa6c41803ee46 299 Pfam PF01634 ATP phosphoribosyltransferase 54 219 3.3E-48 T 28-03-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 AM393_RS01645 8dba00c94ebfccbb3abfa6c41803ee46 299 Gene3D G3DSA:3.40.190.10 1 128 1.3E-36 T 28-03-2018 AM393_RS01645 8dba00c94ebfccbb3abfa6c41803ee46 299 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 7 197 1.6E-58 T 28-03-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 AM393_RS01645 8dba00c94ebfccbb3abfa6c41803ee46 299 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 156 177 - T 28-03-2018 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 AM393_RS01645 8dba00c94ebfccbb3abfa6c41803ee46 299 TIGRFAM TIGR03455 HisG_C-term: ATP phosphoribosyltransferase, C-terminal domain 200 298 5.5E-33 T 28-03-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 AM393_RS01645 8dba00c94ebfccbb3abfa6c41803ee46 299 Hamap MF_00079 ATP phosphoribosyltransferase [hisG]. 6 299 36.34 T 28-03-2018 IPR020621 ATP phosphoribosyltransferase HisG, long form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 AM393_RS01645 8dba00c94ebfccbb3abfa6c41803ee46 299 SUPERFAMILY SSF53850 6 224 3.62E-70 T 28-03-2018 AM393_RS01645 8dba00c94ebfccbb3abfa6c41803ee46 299 SUPERFAMILY SSF54913 226 298 7.78E-22 T 28-03-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta AM393_RS01645 8dba00c94ebfccbb3abfa6c41803ee46 299 Gene3D G3DSA:3.40.190.10 129 223 2.6E-23 T 28-03-2018 AM393_RS01645 8dba00c94ebfccbb3abfa6c41803ee46 299 Pfam PF08029 HisG, C-terminal domain 223 296 1.1E-24 T 28-03-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 AM393_RS01915 a3161d4b759e3b625f5cf05046fa8e7f 297 Hamap MF_01377 Probable lipid kinase YegS [yegS]. 6 297 44.636 T 28-03-2018 IPR022433 Lipid kinase YegS GO:0001727|GO:0046872 AM393_RS01915 a3161d4b759e3b625f5cf05046fa8e7f 297 SMART SM00046 6 127 8.0E-19 T 28-03-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 AM393_RS01915 a3161d4b759e3b625f5cf05046fa8e7f 297 SUPERFAMILY SSF111331 7 294 1.2E-70 T 28-03-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain AM393_RS01915 a3161d4b759e3b625f5cf05046fa8e7f 297 Gene3D G3DSA:3.40.50.10330 7 136 3.0E-28 T 28-03-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 AM393_RS01915 a3161d4b759e3b625f5cf05046fa8e7f 297 TIGRFAM TIGR03702 lip_kinase_YegS: lipid kinase YegS 7 296 2.5E-136 T 28-03-2018 IPR022433 Lipid kinase YegS GO:0001727|GO:0046872 AM393_RS01915 a3161d4b759e3b625f5cf05046fa8e7f 297 Pfam PF00781 Diacylglycerol kinase catalytic domain 8 127 2.8E-27 T 28-03-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 AM393_RS01915 a3161d4b759e3b625f5cf05046fa8e7f 297 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 1 291 3.8E-104 T 28-03-2018 IPR005218 Diacylglycerol/lipid kinase AM393_RS28685 fd2e59124a9cdeb79299d29993c2ef2e 222 Gene3D G3DSA:1.20.1170.10 4 222 5.1E-5 T 28-03-2018 AM393_RS28685 fd2e59124a9cdeb79299d29993c2ef2e 222 TIGRFAM TIGR02977 phageshock_pspA: phage shock protein A 1 218 3.2E-92 T 28-03-2018 IPR014319 Phage shock protein, PspA AM393_RS28685 fd2e59124a9cdeb79299d29993c2ef2e 222 Pfam PF04012 PspA/IM30 family 2 216 7.5E-49 T 28-03-2018 IPR007157 PspA/IM30 AM393_RS06015 ca2011e95ca500bdea4a95acfba380f5 387 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 1.6E-82 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM393_RS06015 ca2011e95ca500bdea4a95acfba380f5 387 PRINTS PR00477 Phosphoglycerate kinase family signature 336 347 1.6E-82 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM393_RS06015 ca2011e95ca500bdea4a95acfba380f5 387 PRINTS PR00477 Phosphoglycerate kinase family signature 132 154 1.6E-82 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM393_RS06015 ca2011e95ca500bdea4a95acfba380f5 387 PRINTS PR00477 Phosphoglycerate kinase family signature 359 376 1.6E-82 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM393_RS06015 ca2011e95ca500bdea4a95acfba380f5 387 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 1.6E-82 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM393_RS06015 ca2011e95ca500bdea4a95acfba380f5 387 PRINTS PR00477 Phosphoglycerate kinase family signature 163 185 1.6E-82 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM393_RS06015 ca2011e95ca500bdea4a95acfba380f5 387 PRINTS PR00477 Phosphoglycerate kinase family signature 186 205 1.6E-82 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM393_RS06015 ca2011e95ca500bdea4a95acfba380f5 387 PRINTS PR00477 Phosphoglycerate kinase family signature 104 119 1.6E-82 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM393_RS06015 ca2011e95ca500bdea4a95acfba380f5 387 PRINTS PR00477 Phosphoglycerate kinase family signature 303 328 1.6E-82 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM393_RS06015 ca2011e95ca500bdea4a95acfba380f5 387 SUPERFAMILY SSF53748 3 383 1.41E-143 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM393_RS06015 ca2011e95ca500bdea4a95acfba380f5 387 Pfam PF00162 Phosphoglycerate kinase 6 373 3.5E-138 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM393_RS06015 ca2011e95ca500bdea4a95acfba380f5 387 Gene3D G3DSA:3.40.50.1260 175 371 9.4E-74 T 28-03-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM393_RS06015 ca2011e95ca500bdea4a95acfba380f5 387 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 383 38.886 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM393_RS06015 ca2011e95ca500bdea4a95acfba380f5 387 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 28-03-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM393_RS06015 ca2011e95ca500bdea4a95acfba380f5 387 PIRSF PIRSF000724 1 387 1.5E-132 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM393_RS06015 ca2011e95ca500bdea4a95acfba380f5 387 Gene3D G3DSA:3.40.50.1260 3 174 1.2E-61 T 28-03-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM393_RS21490 fd682c66c5597b7c74ec296c8506ef90 274 Gene3D G3DSA:2.60.120.10 5 178 1.0E-14 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AM393_RS21490 fd682c66c5597b7c74ec296c8506ef90 274 Gene3D G3DSA:1.10.10.60 225 272 1.5E-11 T 28-03-2018 AM393_RS21490 fd682c66c5597b7c74ec296c8506ef90 274 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 221 263 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM393_RS21490 fd682c66c5597b7c74ec296c8506ef90 274 SUPERFAMILY SSF46689 220 270 1.21E-13 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS21490 fd682c66c5597b7c74ec296c8506ef90 274 Gene3D G3DSA:1.10.10.60 179 224 8.2E-4 T 28-03-2018 AM393_RS21490 fd682c66c5597b7c74ec296c8506ef90 274 Pfam PF12833 Helix-turn-helix domain 193 268 8.1E-19 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM393_RS21490 fd682c66c5597b7c74ec296c8506ef90 274 Pfam PF07883 Cupin domain 23 76 9.3E-9 T 28-03-2018 IPR013096 Cupin 2, conserved barrel AM393_RS21490 fd682c66c5597b7c74ec296c8506ef90 274 SUPERFAMILY SSF51182 20 170 5.94E-16 T 28-03-2018 IPR011051 RmlC-like cupin domain AM393_RS21490 fd682c66c5597b7c74ec296c8506ef90 274 SMART SM00342 184 267 2.4E-25 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM393_RS21490 fd682c66c5597b7c74ec296c8506ef90 274 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 251 267 2.5E-6 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM393_RS21490 fd682c66c5597b7c74ec296c8506ef90 274 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 236 251 2.5E-6 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM393_RS26185 23a0332439388102ceddf87b93ee9b68 338 ProDom PD005364 ALDOLASE 4-HYDROXY-2-OXOVALERATE LYASE PYRUVATE 4.1.3.- PLASMID HMG-COA LYASE-LIKE TRANSFERASE HOA 272 336 1.0E-27 T 28-03-2018 IPR012425 DmpG-like communication GO:0016833|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 AM393_RS26185 23a0332439388102ceddf87b93ee9b68 338 Pfam PF00682 HMGL-like 6 262 5.4E-74 T 28-03-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 AM393_RS26185 23a0332439388102ceddf87b93ee9b68 338 SUPERFAMILY SSF89000 288 336 1.61E-18 T 28-03-2018 AM393_RS26185 23a0332439388102ceddf87b93ee9b68 338 Pfam PF07836 DmpG-like communication domain 274 333 1.3E-30 T 28-03-2018 IPR012425 DmpG-like communication GO:0016833|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 AM393_RS26185 23a0332439388102ceddf87b93ee9b68 338 Gene3D G3DSA:1.10.8.60 279 337 1.3E-32 T 28-03-2018 AM393_RS26185 23a0332439388102ceddf87b93ee9b68 338 Hamap MF_01656 4-hydroxy-2-oxovalerate aldolase [mhpE]. 1 338 220.608 T 28-03-2018 IPR017629 4-hydroxy-2-oxovalerate aldolase GO:0008701|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 AM393_RS26185 23a0332439388102ceddf87b93ee9b68 338 Gene3D G3DSA:3.20.20.70 5 278 6.6E-57 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM393_RS26185 23a0332439388102ceddf87b93ee9b68 338 TIGRFAM TIGR03217 4OH_2_O_val_ald: 4-hydroxy-2-oxovalerate aldolase 4 336 7.2E-176 T 28-03-2018 IPR017629 4-hydroxy-2-oxovalerate aldolase GO:0008701|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 AM393_RS26185 23a0332439388102ceddf87b93ee9b68 338 SUPERFAMILY SSF51569 3 276 2.38E-67 T 28-03-2018 AM393_RS05090 db35e409c3eade077b8f7cdb2494e64e 305 SUPERFAMILY SSF53850 93 296 2.02E-41 T 28-03-2018 AM393_RS05090 db35e409c3eade077b8f7cdb2494e64e 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 9.3E-10 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS05090 db35e409c3eade077b8f7cdb2494e64e 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 9.3E-10 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS05090 db35e409c3eade077b8f7cdb2494e64e 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 9.3E-10 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS05090 db35e409c3eade077b8f7cdb2494e64e 305 SUPERFAMILY SSF46785 3 87 1.95E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS05090 db35e409c3eade077b8f7cdb2494e64e 305 Gene3D G3DSA:3.40.190.10 92 176 3.7E-17 T 28-03-2018 AM393_RS05090 db35e409c3eade077b8f7cdb2494e64e 305 Pfam PF03466 LysR substrate binding domain 91 292 6.5E-41 T 28-03-2018 IPR005119 LysR, substrate-binding AM393_RS05090 db35e409c3eade077b8f7cdb2494e64e 305 Gene3D G3DSA:3.40.190.10 177 263 1.8E-23 T 28-03-2018 AM393_RS05090 db35e409c3eade077b8f7cdb2494e64e 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 2.2E-21 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS05090 db35e409c3eade077b8f7cdb2494e64e 305 Gene3D G3DSA:1.10.10.10 4 91 5.2E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS03425 f30926ece5e22bac3f0d358ba8a3f5d1 428 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 11 405 2.1E-131 T 28-03-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 AM393_RS03425 f30926ece5e22bac3f0d358ba8a3f5d1 428 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 329 349 - T 28-03-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 AM393_RS03425 f30926ece5e22bac3f0d358ba8a3f5d1 428 Pfam PF00860 Permease family 16 383 7.3E-107 T 28-03-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 AM393_RS20680 0231001806301502308d2f43c14d2a01 402 Gene3D G3DSA:1.20.1250.20 12 196 3.4E-26 T 28-03-2018 AM393_RS20680 0231001806301502308d2f43c14d2a01 402 Gene3D G3DSA:1.20.1250.20 199 396 2.4E-20 T 28-03-2018 AM393_RS20680 0231001806301502308d2f43c14d2a01 402 Pfam PF07690 Major Facilitator Superfamily 20 232 2.0E-21 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS20680 0231001806301502308d2f43c14d2a01 402 SUPERFAMILY SSF103473 14 392 2.88E-52 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS20680 0231001806301502308d2f43c14d2a01 402 Hamap MF_01529 Multidrug resistance protein MdtH [mdtH]. 1 401 41.102 T 28-03-2018 IPR022855 Multidrug resistance protein MdtH AM393_RS06525 611cf4ca990c3bb411abd1821731901e 361 Pfam PF09952 Transcriptional regulator, AbiEi antitoxin, Type IV TA system 210 357 2.3E-6 T 28-03-2018 IPR019238 Transcriptional regulator, AbiEi 2 antitoxin, Type IV TA system AM393_RS18655 2a42d34d70c8887ddfbf528b80d38190 129 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 7 126 7.3E-40 T 28-03-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM393_RS18655 2a42d34d70c8887ddfbf528b80d38190 129 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 6 123 9.7E-30 T 28-03-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM393_RS18655 2a42d34d70c8887ddfbf528b80d38190 129 ProSitePatterns PS01000 Succinate dehydrogenase cytochrome b subunit signature 1. 9 33 - T 28-03-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM393_RS18655 2a42d34d70c8887ddfbf528b80d38190 129 ProSitePatterns PS01001 Succinate dehydrogenase cytochrome b subunit signature 2. 84 97 - T 28-03-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM393_RS18655 2a42d34d70c8887ddfbf528b80d38190 129 PIRSF PIRSF000178 1 129 3.8E-33 T 28-03-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM393_RS18655 2a42d34d70c8887ddfbf528b80d38190 129 SUPERFAMILY SSF81343 1 129 1.96E-36 T 28-03-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM393_RS18655 2a42d34d70c8887ddfbf528b80d38190 129 Gene3D G3DSA:1.20.1300.10 1 129 1.7E-27 T 28-03-2018 AM393_RS06595 2cb2ded2331ef1928fdb479845cc8edf 161 Pfam PF13508 Acetyltransferase (GNAT) domain 42 143 6.2E-9 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AM393_RS06595 2cb2ded2331ef1928fdb479845cc8edf 161 Gene3D G3DSA:3.40.630.30 22 154 5.4E-18 T 28-03-2018 AM393_RS06595 2cb2ded2331ef1928fdb479845cc8edf 161 SUPERFAMILY SSF55729 26 148 1.54E-14 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM393_RS00890 d7ac8b84fc9350894db64635e889fea6 74 Pfam PF10769 Protein of unknown function (DUF2594) 1 74 4.4E-39 T 28-03-2018 AM393_RS00780 148f2e16bf410b2db2fb9aff0ea8c272 326 Pfam PF02653 Branched-chain amino acid transport system / permease component 56 313 1.1E-44 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AM393_RS00780 148f2e16bf410b2db2fb9aff0ea8c272 326 Gene3D G3DSA:1.10.3470.10 18 319 2.2E-33 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AM393_RS20665 ad885085945b97a6778df98ea946511d 83 Pfam PF06183 DinI-like family 14 78 2.6E-28 T 28-03-2018 IPR010391 DNA damage-inducible protein DinI-like AM393_RS20665 ad885085945b97a6778df98ea946511d 83 Gene3D G3DSA:3.30.910.10 1 78 2.6E-30 T 28-03-2018 IPR010391 DNA damage-inducible protein DinI-like AM393_RS20665 ad885085945b97a6778df98ea946511d 83 SUPERFAMILY SSF54857 1 79 7.06E-26 T 28-03-2018 IPR010391 DNA damage-inducible protein DinI-like AM393_RS06445 35a441a8e27604e7af7e4a84323e9542 123 Pfam PF11990 Protein of unknown function (DUF3487) 3 113 1.6E-42 T 28-03-2018 IPR021877 Protein of unknown function DUF3487 AM393_RS06445 35a441a8e27604e7af7e4a84323e9542 123 TIGRFAM TIGR03750 conj_TIGR03750: conjugative transfer region protein, TIGR03750 family 4 112 4.4E-42 T 28-03-2018 IPR021877 Protein of unknown function DUF3487 AM393_RS24835 9daff41aeb29d0f9d52718404cb1fce9 146 Gene3D G3DSA:3.10.180.10 3 137 2.2E-20 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM393_RS24835 9daff41aeb29d0f9d52718404cb1fce9 146 SUPERFAMILY SSF54593 7 133 4.13E-21 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM393_RS24835 9daff41aeb29d0f9d52718404cb1fce9 146 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 8 128 2.5E-9 T 28-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AM393_RS20520 f7c24f07192d3752f55b0cf38df35ead 214 PIRSF PIRSF001488 6 213 2.0E-50 T 28-03-2018 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL AM393_RS20520 f7c24f07192d3752f55b0cf38df35ead 214 Gene3D G3DSA:3.40.30.10 23 212 1.6E-29 T 28-03-2018 AM393_RS20520 f7c24f07192d3752f55b0cf38df35ead 214 Pfam PF01323 DSBA-like thioredoxin domain 47 196 3.5E-17 T 28-03-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590 AM393_RS20520 f7c24f07192d3752f55b0cf38df35ead 214 ProSitePatterns PS00194 Thioredoxin family active site. 47 65 - T 28-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AM393_RS20520 f7c24f07192d3752f55b0cf38df35ead 214 SUPERFAMILY SSF52833 28 206 1.89E-30 T 28-03-2018 IPR012336 Thioredoxin-like fold AM393_RS09415 8b7e9eafc6b40d4cd34de8b2805abeb7 331 Hamap MF_01949 O-acetyltransferase WecH [wecH]. 1 331 35.928 T 28-03-2018 IPR032905 O-acetyltransferase WecH GO:0009246|GO:0016413 AM393_RS09415 8b7e9eafc6b40d4cd34de8b2805abeb7 331 Pfam PF01757 Acyltransferase family 5 317 2.5E-26 T 28-03-2018 IPR002656 Acyltransferase 3 GO:0016747 AM393_RS21595 455f11fc32287ba13fe10ab35a6f1dd8 152 SUPERFAMILY SSF46785 32 149 1.08E-25 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS21595 455f11fc32287ba13fe10ab35a6f1dd8 152 Gene3D G3DSA:1.10.10.10 1 152 6.1E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS21595 455f11fc32287ba13fe10ab35a6f1dd8 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 94 110 5.4E-8 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM393_RS21595 455f11fc32287ba13fe10ab35a6f1dd8 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 58 74 5.4E-8 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM393_RS21595 455f11fc32287ba13fe10ab35a6f1dd8 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 75 90 5.4E-8 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM393_RS21595 455f11fc32287ba13fe10ab35a6f1dd8 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 124 144 5.4E-8 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM393_RS21595 455f11fc32287ba13fe10ab35a6f1dd8 152 Pfam PF12802 MarR family 46 97 5.5E-11 T 28-03-2018 AM393_RS21595 455f11fc32287ba13fe10ab35a6f1dd8 152 SMART SM00347 32 134 1.7E-12 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM393_RS00120 3dd9b64fc6b983ac80d7117603f5b66d 299 Gene3D G3DSA:3.40.190.10 92 180 5.7E-25 T 28-03-2018 AM393_RS00120 3dd9b64fc6b983ac80d7117603f5b66d 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 2.7E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS00120 3dd9b64fc6b983ac80d7117603f5b66d 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 2.7E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS00120 3dd9b64fc6b983ac80d7117603f5b66d 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 2.7E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS00120 3dd9b64fc6b983ac80d7117603f5b66d 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 2.3E-19 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS00120 3dd9b64fc6b983ac80d7117603f5b66d 299 Gene3D G3DSA:1.10.10.10 2 87 9.7E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS00120 3dd9b64fc6b983ac80d7117603f5b66d 299 SUPERFAMILY SSF46785 4 114 8.71E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS00120 3dd9b64fc6b983ac80d7117603f5b66d 299 Gene3D G3DSA:3.40.190.10 181 270 9.8E-20 T 28-03-2018 AM393_RS00120 3dd9b64fc6b983ac80d7117603f5b66d 299 Pfam PF03466 LysR substrate binding domain 92 294 8.9E-43 T 28-03-2018 IPR005119 LysR, substrate-binding AM393_RS00120 3dd9b64fc6b983ac80d7117603f5b66d 299 SUPERFAMILY SSF53850 94 297 1.01E-43 T 28-03-2018 AM393_RS27950 71923c726160b6095df12d1a197d8037 197 SUPERFAMILY SSF48657 55 191 6.67E-31 T 28-03-2018 IPR016103 ProQ/FinO domain AM393_RS27950 71923c726160b6095df12d1a197d8037 197 Gene3D G3DSA:1.10.1710.10 43 196 1.5E-36 T 28-03-2018 IPR016103 ProQ/FinO domain AM393_RS27950 71923c726160b6095df12d1a197d8037 197 Pfam PF12602 Fertility inhibition protein N terminal 1 70 1.9E-24 T 28-03-2018 IPR021065 Fertility inhibition protein FinO, N-terminal AM393_RS27950 71923c726160b6095df12d1a197d8037 197 Pfam PF04352 ProQ/FINO family 89 192 5.3E-24 T 28-03-2018 IPR016103 ProQ/FinO domain AM393_RS27950 71923c726160b6095df12d1a197d8037 197 SMART SM00945 84 193 3.4E-13 T 28-03-2018 IPR016103 ProQ/FinO domain AM393_RS19695 5d832fdb71ebbff8369eea3a15d1914f 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 127 143 9.0E-74 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM393_RS19695 5d832fdb71ebbff8369eea3a15d1914f 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 314 340 9.0E-74 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM393_RS19695 5d832fdb71ebbff8369eea3a15d1914f 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 51 72 9.0E-74 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM393_RS19695 5d832fdb71ebbff8369eea3a15d1914f 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 78 92 9.0E-74 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM393_RS19695 5d832fdb71ebbff8369eea3a15d1914f 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 158 172 9.0E-74 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM393_RS19695 5d832fdb71ebbff8369eea3a15d1914f 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 94 107 9.0E-74 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM393_RS19695 5d832fdb71ebbff8369eea3a15d1914f 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 181 200 9.0E-74 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM393_RS19695 5d832fdb71ebbff8369eea3a15d1914f 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 219 238 9.0E-74 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM393_RS19695 5d832fdb71ebbff8369eea3a15d1914f 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 35 51 9.0E-74 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM393_RS19695 5d832fdb71ebbff8369eea3a15d1914f 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 269 288 9.0E-74 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM393_RS19695 5d832fdb71ebbff8369eea3a15d1914f 370 Gene3D G3DSA:3.40.190.10 201 335 3.3E-19 T 28-03-2018 AM393_RS19695 5d832fdb71ebbff8369eea3a15d1914f 370 Pfam PF13416 Bacterial extracellular solute-binding protein 46 335 1.1E-34 T 28-03-2018 AM393_RS19695 5d832fdb71ebbff8369eea3a15d1914f 370 SUPERFAMILY SSF53850 29 369 8.61E-106 T 28-03-2018 AM393_RS19695 5d832fdb71ebbff8369eea3a15d1914f 370 Gene3D G3DSA:3.40.190.10 23 200 1.1E-34 T 28-03-2018 AM393_RS19695 5d832fdb71ebbff8369eea3a15d1914f 370 PIRSF PIRSF019574 1 370 7.0E-145 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM393_RS11560 e83351428b7e084a5a8c4b02800f8509 491 Gene3D G3DSA:3.40.1670.10 323 459 3.1E-52 T 28-03-2018 AM393_RS11560 e83351428b7e084a5a8c4b02800f8509 491 SUPERFAMILY SSF143968 323 486 4.05E-66 T 28-03-2018 AM393_RS11560 e83351428b7e084a5a8c4b02800f8509 491 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 11 431 8.0E-173 T 28-03-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 AM393_RS11560 e83351428b7e084a5a8c4b02800f8509 491 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 6 455 4.4E-189 T 28-03-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 AM393_RS11560 e83351428b7e084a5a8c4b02800f8509 491 Hamap MF_01636 3-octaprenyl-4-hydroxybenzoate carboxy-lyase [ubiD]. 1 487 73.752 T 28-03-2018 IPR023677 UbiD decarboxylyase, bacteria GO:0005886|GO:0006744|GO:0008694 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 AM393_RS11560 e83351428b7e084a5a8c4b02800f8509 491 SUPERFAMILY SSF50475 3 322 7.45E-128 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 AM393_RS11560 e83351428b7e084a5a8c4b02800f8509 491 Gene3D G3DSA:1.20.5.570 460 487 3.7E-19 T 28-03-2018 AM393_RS03220 68b9186b533a6082fa917f003c4efd05 350 Pfam PF12833 Helix-turn-helix domain 262 342 2.8E-22 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM393_RS03220 68b9186b533a6082fa917f003c4efd05 350 SUPERFAMILY SSF46689 240 290 1.16E-6 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS03220 68b9186b533a6082fa917f003c4efd05 350 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 293 338 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM393_RS03220 68b9186b533a6082fa917f003c4efd05 350 SMART SM00342 256 342 1.2E-20 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM393_RS03220 68b9186b533a6082fa917f003c4efd05 350 Gene3D G3DSA:1.10.10.60 293 348 2.2E-4 T 28-03-2018 AM393_RS03220 68b9186b533a6082fa917f003c4efd05 350 Gene3D G3DSA:1.10.10.60 233 292 4.4E-12 T 28-03-2018 AM393_RS01230 2640007f9729cf05bea890d3e8d0d36b 426 Gene3D G3DSA:1.20.1250.20 6 215 1.1E-7 T 28-03-2018 AM393_RS01230 2640007f9729cf05bea890d3e8d0d36b 426 SUPERFAMILY SSF103473 4 414 2.62E-26 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS01230 2640007f9729cf05bea890d3e8d0d36b 426 Pfam PF07690 Major Facilitator Superfamily 25 365 5.8E-9 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS01230 2640007f9729cf05bea890d3e8d0d36b 426 Gene3D G3DSA:1.20.1250.20 224 422 4.0E-14 T 28-03-2018 AM393_RS15080 e22b96e62c39b29c8e487f11b704aa86 146 SUPERFAMILY SSF53062 1 124 2.49E-25 T 28-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 AM393_RS15080 e22b96e62c39b29c8e487f11b704aa86 146 Pfam PF03610 PTS system fructose IIA component 3 116 2.6E-24 T 28-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 AM393_RS15080 e22b96e62c39b29c8e487f11b704aa86 146 Gene3D G3DSA:3.40.50.510 1 143 5.8E-22 T 28-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 AM393_RS09105 c845f8145ca0e7744ec9ca4d2c77461b 382 Pfam PF00465 Iron-containing alcohol dehydrogenase 10 372 1.6E-86 T 28-03-2018 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 AM393_RS09105 c845f8145ca0e7744ec9ca4d2c77461b 382 Gene3D G3DSA:1.20.1090.10 184 382 1.0E-35 T 28-03-2018 AM393_RS09105 c845f8145ca0e7744ec9ca4d2c77461b 382 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 173 201 - T 28-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 AM393_RS09105 c845f8145ca0e7744ec9ca4d2c77461b 382 Gene3D G3DSA:3.40.50.1970 10 182 3.4E-38 T 28-03-2018 AM393_RS09105 c845f8145ca0e7744ec9ca4d2c77461b 382 SUPERFAMILY SSF56796 4 381 3.27E-81 T 28-03-2018 AM393_RS06885 753f8b57e605535f17fb760221d561aa 274 Hamap MF_01384 Urease accessory protein UreD [ureD]. 13 258 27.837 T 28-03-2018 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 AM393_RS06885 753f8b57e605535f17fb760221d561aa 274 Pfam PF01774 UreD urease accessory protein 54 243 9.0E-45 T 28-03-2018 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 AM393_RS25645 68663694cabc6e492835da8c0468c1ea 69 Gene3D G3DSA:3.30.1660.10 7 69 1.4E-13 T 28-03-2018 IPR025543 Dodecin-like AM393_RS25645 68663694cabc6e492835da8c0468c1ea 69 Pfam PF07338 Protein of unknown function (DUF1471) 24 67 5.3E-8 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 AM393_RS25645 68663694cabc6e492835da8c0468c1ea 69 SUPERFAMILY SSF159871 3 67 1.44E-10 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 AM393_RS19340 6e74cdf61643522cd76445e308203d4e 513 SUPERFAMILY SSF53850 30 509 4.24E-146 T 28-03-2018 AM393_RS19340 6e74cdf61643522cd76445e308203d4e 513 Gene3D G3DSA:3.90.76.10 37 181 9.7E-41 T 28-03-2018 AM393_RS19340 6e74cdf61643522cd76445e308203d4e 513 PIRSF PIRSF002741 13 512 2.5E-110 T 28-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AM393_RS19340 6e74cdf61643522cd76445e308203d4e 513 Gene3D G3DSA:3.40.190.10 182 274 3.1E-27 T 28-03-2018 AM393_RS19340 6e74cdf61643522cd76445e308203d4e 513 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 71 429 1.9E-99 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain AM393_RS19340 6e74cdf61643522cd76445e308203d4e 513 Gene3D G3DSA:3.10.105.10 275 486 1.1E-60 T 28-03-2018 AM393_RS04550 b9101aa39aaf6e6dce0b9795aa5ffd16 180 Gene3D G3DSA:3.30.70.20 78 165 5.2E-7 T 28-03-2018 AM393_RS04550 b9101aa39aaf6e6dce0b9795aa5ffd16 180 Pfam PF12838 4Fe-4S dicluster domain 39 89 1.7E-12 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM393_RS04550 b9101aa39aaf6e6dce0b9795aa5ffd16 180 Gene3D G3DSA:3.30.70.20 51 77 7.3E-13 T 28-03-2018 AM393_RS04550 b9101aa39aaf6e6dce0b9795aa5ffd16 180 SUPERFAMILY SSF54862 18 118 3.26E-22 T 28-03-2018 AM393_RS04550 b9101aa39aaf6e6dce0b9795aa5ffd16 180 Gene3D G3DSA:3.30.70.20 10 50 1.6E-8 T 28-03-2018 AM393_RS04550 b9101aa39aaf6e6dce0b9795aa5ffd16 180 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 75 86 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM393_RS23535 565e7b5ea9c3ca2c29b6365b54a67f9f 294 Pfam PF00701 Dihydrodipicolinate synthetase family 5 273 4.0E-63 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AM393_RS23535 565e7b5ea9c3ca2c29b6365b54a67f9f 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 105 121 3.6E-18 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AM393_RS23535 565e7b5ea9c3ca2c29b6365b54a67f9f 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 37 58 3.6E-18 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AM393_RS23535 565e7b5ea9c3ca2c29b6365b54a67f9f 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 130 147 3.6E-18 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AM393_RS23535 565e7b5ea9c3ca2c29b6365b54a67f9f 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 73 91 3.6E-18 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AM393_RS23535 565e7b5ea9c3ca2c29b6365b54a67f9f 294 PIRSF PIRSF001365 1 291 1.9E-71 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AM393_RS23535 565e7b5ea9c3ca2c29b6365b54a67f9f 294 SMART SM01130 4 293 2.6E-95 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AM393_RS23535 565e7b5ea9c3ca2c29b6365b54a67f9f 294 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 135 165 - T 28-03-2018 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 AM393_RS23535 565e7b5ea9c3ca2c29b6365b54a67f9f 294 Gene3D G3DSA:3.20.20.70 1 294 1.4E-81 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM393_RS23535 565e7b5ea9c3ca2c29b6365b54a67f9f 294 SUPERFAMILY SSF51569 2 290 1.05E-76 T 28-03-2018 AM393_RS05045 b21dc39dde630b71cb7bbb36fef0443e 382 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 259 279 - T 28-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 AM393_RS05045 b21dc39dde630b71cb7bbb36fef0443e 382 TIGRFAM TIGR02638 lactal_redase: lactaldehyde reductase 2 378 1.2E-190 T 28-03-2018 IPR013460 Lactaldehyde reductase KEGG: 00630+1.1.1.77|KEGG: 00640+1.1.1.77 AM393_RS05045 b21dc39dde630b71cb7bbb36fef0443e 382 Gene3D G3DSA:1.20.1090.10 186 382 7.1E-61 T 28-03-2018 AM393_RS05045 b21dc39dde630b71cb7bbb36fef0443e 382 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 174 202 - T 28-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 AM393_RS05045 b21dc39dde630b71cb7bbb36fef0443e 382 Gene3D G3DSA:3.40.50.1970 9 184 6.3E-42 T 28-03-2018 AM393_RS05045 b21dc39dde630b71cb7bbb36fef0443e 382 Pfam PF00465 Iron-containing alcohol dehydrogenase 10 374 1.3E-114 T 28-03-2018 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 AM393_RS05045 b21dc39dde630b71cb7bbb36fef0443e 382 SUPERFAMILY SSF56796 7 382 2.09E-120 T 28-03-2018 AM393_RS06815 44fa2efb0d4c2589749386429466b946 263 PIRSF PIRSF006157 1 263 8.9E-93 T 28-03-2018 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA-type GO:0008270|GO:0016701|GO:0055114 AM393_RS06815 44fa2efb0d4c2589749386429466b946 263 SUPERFAMILY SSF53213 5 261 3.27E-92 T 28-03-2018 AM393_RS06815 44fa2efb0d4c2589749386429466b946 263 Gene3D G3DSA:3.40.830.10 1 262 1.8E-83 T 28-03-2018 AM393_RS06815 44fa2efb0d4c2589749386429466b946 263 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 8 254 3.1E-27 T 28-03-2018 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 AM393_RS20740 6fcc2dc2ac8426ebc6560a2b3e877357 386 Gene3D G3DSA:3.40.718.10 22 361 6.8E-116 T 28-03-2018 AM393_RS20740 6fcc2dc2ac8426ebc6560a2b3e877357 386 PIRSF PIRSF002465 23 364 2.6E-127 T 28-03-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 AM393_RS20740 6fcc2dc2ac8426ebc6560a2b3e877357 386 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 366 136.481 T 28-03-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 AM393_RS20740 6fcc2dc2ac8426ebc6560a2b3e877357 386 Pfam PF02504 Fatty acid synthesis protein 26 352 3.1E-126 T 28-03-2018 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 AM393_RS20740 6fcc2dc2ac8426ebc6560a2b3e877357 386 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 27 366 1.5E-145 T 28-03-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 AM393_RS20740 6fcc2dc2ac8426ebc6560a2b3e877357 386 SUPERFAMILY SSF53659 25 361 1.77E-103 T 28-03-2018 AM393_RS10130 c052680dfea162a7f369635331069518 370 SUPERFAMILY SSF52540 19 258 1.56E-81 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS10130 c052680dfea162a7f369635331069518 370 SUPERFAMILY SSF50331 254 366 2.45E-11 T 28-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal AM393_RS10130 c052680dfea162a7f369635331069518 370 Gene3D G3DSA:2.40.50.140 297 360 8.2E-6 T 28-03-2018 AM393_RS10130 c052680dfea162a7f369635331069518 370 Pfam PF08402 TOBE domain 294 366 3.5E-12 T 28-03-2018 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 AM393_RS10130 c052680dfea162a7f369635331069518 370 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS10130 c052680dfea162a7f369635331069518 370 SMART SM00382 43 243 6.0E-20 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS10130 c052680dfea162a7f369635331069518 370 Gene3D G3DSA:3.40.50.300 16 271 3.2E-72 T 28-03-2018 AM393_RS10130 c052680dfea162a7f369635331069518 370 TIGRFAM TIGR03258 PhnT: 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT 12 369 5.9E-194 T 28-03-2018 IPR017662 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT GO:0005524|GO:0006810|GO:0016020 AM393_RS10130 c052680dfea162a7f369635331069518 370 Pfam PF00005 ABC transporter 34 176 3.4E-35 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS00345 db454173515f2bad152d22b6064f8d14 375 Gene3D G3DSA:1.10.150.80 195 293 1.9E-21 T 28-03-2018 AM393_RS00345 db454173515f2bad152d22b6064f8d14 375 SUPERFAMILY SSF47819 193 301 3.36E-30 T 28-03-2018 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 AM393_RS00345 db454173515f2bad152d22b6064f8d14 375 SMART SM00474 3 171 7.9E-47 T 28-03-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 AM393_RS00345 db454173515f2bad152d22b6064f8d14 375 Gene3D G3DSA:3.30.420.10 1 194 4.2E-40 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM393_RS00345 db454173515f2bad152d22b6064f8d14 375 Hamap MF_01899 Ribonuclease D [rnd]. 3 371 45.157 T 28-03-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 AM393_RS00345 db454173515f2bad152d22b6064f8d14 375 SUPERFAMILY SSF53098 2 210 8.13E-66 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM393_RS00345 db454173515f2bad152d22b6064f8d14 375 SUPERFAMILY SSF47819 296 372 2.57E-23 T 28-03-2018 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 AM393_RS00345 db454173515f2bad152d22b6064f8d14 375 SMART SM00341 210 289 5.5E-22 T 28-03-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 AM393_RS00345 db454173515f2bad152d22b6064f8d14 375 Pfam PF00570 HRDC domain 213 278 5.9E-15 T 28-03-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 AM393_RS00345 db454173515f2bad152d22b6064f8d14 375 Pfam PF01612 3'-5' exonuclease 3 169 3.8E-41 T 28-03-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 AM393_RS00345 db454173515f2bad152d22b6064f8d14 375 TIGRFAM TIGR01388 rnd: ribonuclease D 5 370 1.0E-150 T 28-03-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 AM393_RS17465 28864a0c425d74234d4977b6a6920597 114 PIRSF PIRSF028770 1 114 1.1E-54 T 28-03-2018 IPR011223 Uncharacterised conserved protein UCP028770 AM393_RS17465 28864a0c425d74234d4977b6a6920597 114 Pfam PF11742 Protein of unknown function (DUF3302) 3 78 5.2E-38 T 28-03-2018 IPR011223 Uncharacterised conserved protein UCP028770 AM393_RS15450 5db8c3e8dd038e1cb926a570f4c9e92d 572 SUPERFAMILY SSF55826 219 390 1.18E-31 T 28-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AM393_RS15450 5db8c3e8dd038e1cb926a570f4c9e92d 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 8.6E-20 T 28-03-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 AM393_RS15450 5db8c3e8dd038e1cb926a570f4c9e92d 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 8.6E-20 T 28-03-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 AM393_RS15450 5db8c3e8dd038e1cb926a570f4c9e92d 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 8.6E-20 T 28-03-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 AM393_RS15450 5db8c3e8dd038e1cb926a570f4c9e92d 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 8.6E-20 T 28-03-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 AM393_RS15450 5db8c3e8dd038e1cb926a570f4c9e92d 572 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 571 43.222 T 28-03-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 AM393_RS15450 5db8c3e8dd038e1cb926a570f4c9e92d 572 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 568 1.1E-279 T 28-03-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 AM393_RS15450 5db8c3e8dd038e1cb926a570f4c9e92d 572 SUPERFAMILY SSF52954 462 571 6.49E-33 T 28-03-2018 IPR004154 Anticodon-binding AM393_RS15450 5db8c3e8dd038e1cb926a570f4c9e92d 572 Gene3D G3DSA:3.40.50.800 461 572 3.1E-31 T 28-03-2018 IPR004154 Anticodon-binding AM393_RS15450 5db8c3e8dd038e1cb926a570f4c9e92d 572 Pfam PF04073 Aminoacyl-tRNA editing domain 257 376 1.4E-26 T 28-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AM393_RS15450 5db8c3e8dd038e1cb926a570f4c9e92d 572 Gene3D G3DSA:3.30.930.10 11 460 5.3E-102 T 28-03-2018 AM393_RS15450 5db8c3e8dd038e1cb926a570f4c9e92d 572 Pfam PF03129 Anticodon binding domain 475 567 5.9E-21 T 28-03-2018 IPR004154 Anticodon-binding AM393_RS15450 5db8c3e8dd038e1cb926a570f4c9e92d 572 SUPERFAMILY SSF55681 407 478 3.78E-108 T 28-03-2018 AM393_RS15450 5db8c3e8dd038e1cb926a570f4c9e92d 572 SUPERFAMILY SSF55681 10 237 3.78E-108 T 28-03-2018 AM393_RS15450 5db8c3e8dd038e1cb926a570f4c9e92d 572 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 459 2.6E-50 T 28-03-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM393_RS15450 5db8c3e8dd038e1cb926a570f4c9e92d 572 PIRSF PIRSF001535 1 572 4.3E-278 T 28-03-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 AM393_RS12190 70ae03d818301b4f2de490897840abed 337 Gene3D G3DSA:1.10.260.40 23 65 6.9E-22 T 28-03-2018 AM393_RS12190 70ae03d818301b4f2de490897840abed 337 SUPERFAMILY SSF53822 64 323 1.2E-50 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AM393_RS12190 70ae03d818301b4f2de490897840abed 337 Gene3D G3DSA:3.40.50.2300 66 171 1.5E-26 T 28-03-2018 AM393_RS12190 70ae03d818301b4f2de490897840abed 337 Gene3D G3DSA:3.40.50.2300 172 334 4.5E-35 T 28-03-2018 AM393_RS12190 70ae03d818301b4f2de490897840abed 337 Pfam PF00356 Bacterial regulatory proteins, lacI family 11 54 4.5E-15 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM393_RS12190 70ae03d818301b4f2de490897840abed 337 Pfam PF13377 Periplasmic binding protein-like domain 173 333 4.4E-25 T 28-03-2018 AM393_RS12190 70ae03d818301b4f2de490897840abed 337 SUPERFAMILY SSF47413 8 65 1.18E-16 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM393_RS12190 70ae03d818301b4f2de490897840abed 337 SMART SM00354 7 77 8.0E-24 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM393_RS12190 70ae03d818301b4f2de490897840abed 337 Gene3D G3DSA:1.10.10.10 3 22 0.0053 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS21075 9b5f59f3f174bdad7893ace6a39c54a4 594 SUPERFAMILY SSF55073 432 588 3.45E-45 T 28-03-2018 IPR029787 Nucleotide cyclase AM393_RS21075 9b5f59f3f174bdad7893ace6a39c54a4 594 Pfam PF00672 HAMP domain 207 254 3.9E-6 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM393_RS21075 9b5f59f3f174bdad7893ace6a39c54a4 594 SUPERFAMILY SSF158472 207 254 4.05E-7 T 28-03-2018 AM393_RS21075 9b5f59f3f174bdad7893ace6a39c54a4 594 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 426 586 9.8E-48 T 28-03-2018 IPR000160 GGDEF domain AM393_RS21075 9b5f59f3f174bdad7893ace6a39c54a4 594 Pfam PF00990 Diguanylate cyclase, GGDEF domain 427 583 1.3E-43 T 28-03-2018 IPR000160 GGDEF domain AM393_RS21075 9b5f59f3f174bdad7893ace6a39c54a4 594 SUPERFAMILY SSF55781 272 420 4.66E-11 T 28-03-2018 IPR029016 GAF domain-like AM393_RS21075 9b5f59f3f174bdad7893ace6a39c54a4 594 SMART SM00267 416 588 1.9E-52 T 28-03-2018 IPR000160 GGDEF domain AM393_RS21075 9b5f59f3f174bdad7893ace6a39c54a4 594 Gene3D G3DSA:3.30.70.270 422 593 5.5E-53 T 28-03-2018 AM393_RS21075 9b5f59f3f174bdad7893ace6a39c54a4 594 SMART SM00304 113 169 44.0 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM393_RS21075 9b5f59f3f174bdad7893ace6a39c54a4 594 SMART SM00304 207 260 1.6E-6 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM393_RS21075 9b5f59f3f174bdad7893ace6a39c54a4 594 Gene3D G3DSA:3.30.450.40 234 421 2.8E-14 T 28-03-2018 IPR029016 GAF domain-like AM393_RS14665 c7c249ce72643e86e737da164439311e 231 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 8 196 3.6E-48 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal AM393_RS14665 c7c249ce72643e86e737da164439311e 231 SMART SM01007 7 198 7.3E-72 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal AM393_RS14665 c7c249ce72643e86e737da164439311e 231 Hamap MF_00989 L-ribulose-5-phosphate 4-epimerase [araD]. 1 231 79.015 T 28-03-2018 IPR033748 L-ribulose-5-phosphate 4-epimerase AraD GO:0008742|GO:0019569 KEGG: 00040+5.1.3.4|KEGG: 00053+5.1.3.4|MetaCyc: PWY-6961 AM393_RS14665 c7c249ce72643e86e737da164439311e 231 Gene3D G3DSA:3.40.225.10 1 231 1.4E-61 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal AM393_RS14665 c7c249ce72643e86e737da164439311e 231 TIGRFAM TIGR00760 araD: L-ribulose-5-phosphate 4-epimerase 1 231 2.4E-133 T 28-03-2018 IPR004661 L-ribulose-5-phosphate 4-epimerase GO:0008270|GO:0008742|GO:0019572 KEGG: 00040+5.1.3.4|KEGG: 00053+5.1.3.4|MetaCyc: PWY-6961 AM393_RS14665 c7c249ce72643e86e737da164439311e 231 SUPERFAMILY SSF53639 1 223 1.71E-71 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal AM393_RS25275 69821883ac8b3ffc1a78df8b392453b6 326 Gene3D G3DSA:2.160.10.10 51 209 6.5E-14 T 28-03-2018 AM393_RS25275 69821883ac8b3ffc1a78df8b392453b6 326 Gene3D G3DSA:2.160.10.10 210 317 3.3E-9 T 28-03-2018 AM393_RS25275 69821883ac8b3ffc1a78df8b392453b6 326 SUPERFAMILY SSF51161 5 291 5.85E-49 T 28-03-2018 IPR011004 Trimeric LpxA-like AM393_RS21475 cf6321ec97837b5e01af60b509018e5c 106 SUPERFAMILY SSF52794 4 102 3.14E-32 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AM393_RS21475 cf6321ec97837b5e01af60b509018e5c 106 TIGRFAM TIGR00853 pts-lac: PTS system, lactose/cellobiose family IIB component 1 94 3.0E-34 T 28-03-2018 IPR013012 Phosphotransferase system, EIIB component, type 3 GO:0008982|GO:0009401 KEGG: 00230+2.7.1.20|MetaCyc: PWY-6619 AM393_RS21475 cf6321ec97837b5e01af60b509018e5c 106 Gene3D G3DSA:3.40.50.2300 5 106 2.3E-29 T 28-03-2018 AM393_RS21475 cf6321ec97837b5e01af60b509018e5c 106 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 6 94 1.1E-15 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AM393_RS04735 2d38651456405a7fe3dd79ebe99dc44f 160 Gene3D G3DSA:2.30.110.20 1 160 1.0E-47 T 28-03-2018 IPR008514 Type VI secretion system effector, Hcp AM393_RS04735 2d38651456405a7fe3dd79ebe99dc44f 160 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 156 1.4E-42 T 28-03-2018 IPR008514 Type VI secretion system effector, Hcp AM393_RS04735 2d38651456405a7fe3dd79ebe99dc44f 160 SUPERFAMILY SSF141452 5 158 2.48E-41 T 28-03-2018 IPR008514 Type VI secretion system effector, Hcp AM393_RS04735 2d38651456405a7fe3dd79ebe99dc44f 160 Pfam PF05638 Type VI secretion system effector, Hcp 12 143 9.5E-35 T 28-03-2018 IPR008514 Type VI secretion system effector, Hcp AM393_RS04325 f60022c92ac35b937a96aa492c1a8048 512 Gene3D G3DSA:1.20.1250.20 255 504 1.0E-32 T 28-03-2018 AM393_RS04325 f60022c92ac35b937a96aa492c1a8048 512 SUPERFAMILY SSF103473 475 500 1.83E-72 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS04325 f60022c92ac35b937a96aa492c1a8048 512 SUPERFAMILY SSF103473 9 196 1.83E-72 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS04325 f60022c92ac35b937a96aa492c1a8048 512 SUPERFAMILY SSF103473 251 423 1.83E-72 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS04325 f60022c92ac35b937a96aa492c1a8048 512 Pfam PF07690 Major Facilitator Superfamily 19 413 2.4E-53 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS04325 f60022c92ac35b937a96aa492c1a8048 512 Gene3D G3DSA:1.20.1250.20 13 202 8.7E-35 T 28-03-2018 AM393_RS04325 f60022c92ac35b937a96aa492c1a8048 512 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 13 498 3.6E-215 T 28-03-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 AM393_RS23230 d852908a90f13e562e7127bbb16757f0 285 Gene3D G3DSA:1.20.1630.10 2 283 4.2E-42 T 28-03-2018 AM393_RS23230 d852908a90f13e562e7127bbb16757f0 285 Pfam PF04976 DMSO reductase anchor subunit (DmsC) 1 275 6.9E-97 T 28-03-2018 IPR007059 DMSO reductase anchor subunit (DmsC) GO:0016021|GO:0019645 AM393_RS01855 3880ac1c0fd16bde18367b6d0baeeeb0 450 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 213 226 - T 28-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AM393_RS01855 3880ac1c0fd16bde18367b6d0baeeeb0 450 SUPERFAMILY SSF53067 85 204 4.96E-25 T 28-03-2018 AM393_RS01855 3880ac1c0fd16bde18367b6d0baeeeb0 450 SUPERFAMILY SSF53067 1 44 4.96E-25 T 28-03-2018 AM393_RS01855 3880ac1c0fd16bde18367b6d0baeeeb0 450 Pfam PF00012 Hsp70 protein 3 228 1.7E-12 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM393_RS01855 3880ac1c0fd16bde18367b6d0baeeeb0 450 Pfam PF00012 Hsp70 protein 332 420 1.0E-4 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM393_RS01855 3880ac1c0fd16bde18367b6d0baeeeb0 450 SUPERFAMILY SSF53067 208 276 5.4E-30 T 28-03-2018 AM393_RS01855 3880ac1c0fd16bde18367b6d0baeeeb0 450 SUPERFAMILY SSF53067 328 447 5.4E-30 T 28-03-2018 AM393_RS01855 3880ac1c0fd16bde18367b6d0baeeeb0 450 Gene3D G3DSA:3.30.420.40 1 216 9.4E-33 T 28-03-2018 AM393_RS01855 3880ac1c0fd16bde18367b6d0baeeeb0 450 Gene3D G3DSA:3.30.420.40 217 428 1.5E-29 T 28-03-2018 AM393_RS07850 d6c8f8497198c71e8728103f68647c93 481 PIRSF PIRSF004919 14 481 2.7E-151 T 28-03-2018 IPR025502 TldD AM393_RS07850 d6c8f8497198c71e8728103f68647c93 481 Gene3D G3DSA:3.30.2290.10 18 240 2.4E-56 T 28-03-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal domain AM393_RS07850 d6c8f8497198c71e8728103f68647c93 481 Pfam PF01523 Putative modulator of DNA gyrase 35 332 7.6E-68 T 28-03-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 AM393_RS07850 d6c8f8497198c71e8728103f68647c93 481 SUPERFAMILY SSF111283 20 480 4.71E-129 T 28-03-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 AM393_RS21800 2e7090314353879b0cb81aeb476f4194 330 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 238 305 4.3E-17 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AM393_RS21800 2e7090314353879b0cb81aeb476f4194 330 Gene3D G3DSA:3.40.50.300 1 329 4.3E-58 T 28-03-2018 AM393_RS21800 2e7090314353879b0cb81aeb476f4194 330 Pfam PF00005 ABC transporter 24 187 4.6E-28 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS21800 2e7090314353879b0cb81aeb476f4194 330 SUPERFAMILY SSF52540 3 264 2.51E-53 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS21800 2e7090314353879b0cb81aeb476f4194 330 SMART SM00382 32 245 3.0E-6 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS21800 2e7090314353879b0cb81aeb476f4194 330 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 237 323 5.7E-21 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AM393_RS17010 c68afa0cd29569f7f316b1511ae38e82 476 SUPERFAMILY SSF48024 7 117 1.28E-31 T 28-03-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 AM393_RS17010 c68afa0cd29569f7f316b1511ae38e82 476 Gene3D G3DSA:3.40.50.300 172 469 2.6E-37 T 28-03-2018 AM393_RS17010 c68afa0cd29569f7f316b1511ae38e82 476 Pfam PF03796 DnaB-like helicase C terminal domain 190 444 1.1E-57 T 28-03-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 AM393_RS17010 c68afa0cd29569f7f316b1511ae38e82 476 Pfam PF00772 DnaB-like helicase N terminal domain 8 112 5.5E-33 T 28-03-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 AM393_RS17010 c68afa0cd29569f7f316b1511ae38e82 476 SUPERFAMILY SSF52540 190 261 6.57E-37 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS17010 c68afa0cd29569f7f316b1511ae38e82 476 SUPERFAMILY SSF52540 294 446 6.57E-37 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS17010 c68afa0cd29569f7f316b1511ae38e82 476 Gene3D G3DSA:1.10.860.10 2 153 9.1E-36 T 28-03-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal AM393_RS04965 3f557448e2351fd29b26a464b5fbf10d 281 SUPERFAMILY SSF55620 185 265 3.48E-9 T 28-03-2018 AM393_RS04965 3f557448e2351fd29b26a464b5fbf10d 281 TIGRFAM TIGR03138 QueF: queuine synthase 11 281 4.4E-129 T 28-03-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 AM393_RS04965 3f557448e2351fd29b26a464b5fbf10d 281 Gene3D G3DSA:3.30.1130.10 21 136 1.1E-40 T 28-03-2018 AM393_RS04965 3f557448e2351fd29b26a464b5fbf10d 281 Gene3D G3DSA:3.30.1130.10 144 281 8.1E-49 T 28-03-2018 AM393_RS04965 3f557448e2351fd29b26a464b5fbf10d 281 PIRSF PIRSF004750 6 281 2.7E-128 T 28-03-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 AM393_RS04965 3f557448e2351fd29b26a464b5fbf10d 281 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 21 131 1.9E-48 T 28-03-2018 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 AM393_RS04965 3f557448e2351fd29b26a464b5fbf10d 281 Pfam PF14489 QueF-like protein 195 269 9.5E-27 T 28-03-2018 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 AM393_RS04965 3f557448e2351fd29b26a464b5fbf10d 281 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 281 168.753 T 28-03-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 AM393_RS15680 e76831014a11861dc924feef3744adc4 230 SMART SM00345 12 70 5.9E-16 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM393_RS15680 e76831014a11861dc924feef3744adc4 230 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 70 6.9E-12 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM393_RS15680 e76831014a11861dc924feef3744adc4 230 SMART SM00895 80 212 2.0E-21 T 28-03-2018 IPR011711 GntR, C-terminal AM393_RS15680 e76831014a11861dc924feef3744adc4 230 Pfam PF07729 FCD domain 80 210 4.5E-24 T 28-03-2018 IPR011711 GntR, C-terminal AM393_RS15680 e76831014a11861dc924feef3744adc4 230 Gene3D G3DSA:1.10.10.10 4 71 5.0E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS15680 e76831014a11861dc924feef3744adc4 230 SUPERFAMILY SSF46785 13 74 9.75E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS15680 e76831014a11861dc924feef3744adc4 230 SUPERFAMILY SSF48008 76 213 1.2E-20 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AM393_RS15680 e76831014a11861dc924feef3744adc4 230 Gene3D G3DSA:1.20.120.530 72 217 7.5E-33 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AM393_RS26600 fdfe42e3b4863ac3e2dd9e97526e0532 334 SMART SM00382 49 242 1.7E-18 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS26600 fdfe42e3b4863ac3e2dd9e97526e0532 334 SUPERFAMILY SSF52540 23 264 1.69E-74 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS26600 fdfe42e3b4863ac3e2dd9e97526e0532 334 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 244 311 9.0E-19 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AM393_RS26600 fdfe42e3b4863ac3e2dd9e97526e0532 334 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 242 329 7.2E-28 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AM393_RS26600 fdfe42e3b4863ac3e2dd9e97526e0532 334 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS26600 fdfe42e3b4863ac3e2dd9e97526e0532 334 Pfam PF00005 ABC transporter 41 192 2.4E-31 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS26600 fdfe42e3b4863ac3e2dd9e97526e0532 334 Gene3D G3DSA:3.40.50.300 8 331 5.4E-80 T 28-03-2018 AM393_RS19895 31552388ae2bc68bbd1b4365e3e3d017 164 Pfam PF13412 Winged helix-turn-helix DNA-binding 12 59 2.8E-21 T 28-03-2018 AM393_RS19895 31552388ae2bc68bbd1b4365e3e3d017 164 Gene3D G3DSA:1.10.10.10 8 63 6.1E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS19895 31552388ae2bc68bbd1b4365e3e3d017 164 SUPERFAMILY SSF46785 12 70 4.01E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS19895 31552388ae2bc68bbd1b4365e3e3d017 164 Pfam PF01037 Lrp/AsnC ligand binding domain 78 152 6.0E-25 T 28-03-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AM393_RS19895 31552388ae2bc68bbd1b4365e3e3d017 164 SUPERFAMILY SSF54909 74 157 2.68E-22 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel AM393_RS19895 31552388ae2bc68bbd1b4365e3e3d017 164 ProSitePatterns PS00519 AsnC-type HTH domain signature. 30 56 - T 28-03-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AM393_RS19895 31552388ae2bc68bbd1b4365e3e3d017 164 Gene3D G3DSA:3.30.70.920 64 158 1.0E-27 T 28-03-2018 AM393_RS19895 31552388ae2bc68bbd1b4365e3e3d017 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 12 28 6.2E-23 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AM393_RS19895 31552388ae2bc68bbd1b4365e3e3d017 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 39 6.2E-23 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AM393_RS19895 31552388ae2bc68bbd1b4365e3e3d017 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 39 58 6.2E-23 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AM393_RS19895 31552388ae2bc68bbd1b4365e3e3d017 164 SMART SM00344 12 121 2.1E-55 T 28-03-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AM393_RS03120 c55ffeb4ad3d24e871097899a78f3443 323 TIGRFAM TIGR01139 cysK: cysteine synthase A 9 312 9.9E-146 T 28-03-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 AM393_RS03120 c55ffeb4ad3d24e871097899a78f3443 323 Gene3D G3DSA:3.40.50.1100 134 323 7.4E-59 T 28-03-2018 AM393_RS03120 c55ffeb4ad3d24e871097899a78f3443 323 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 31 49 - T 28-03-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 AM393_RS03120 c55ffeb4ad3d24e871097899a78f3443 323 Gene3D G3DSA:3.40.50.1100 20 133 8.6E-33 T 28-03-2018 AM393_RS03120 c55ffeb4ad3d24e871097899a78f3443 323 SUPERFAMILY SSF53686 3 317 1.57E-97 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AM393_RS03120 c55ffeb4ad3d24e871097899a78f3443 323 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 10 300 9.2E-69 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AM393_RS03120 c55ffeb4ad3d24e871097899a78f3443 323 TIGRFAM TIGR01136 cysKM: cysteine synthase 10 312 2.8E-137 T 28-03-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 AM393_RS06905 cd76b601f8584eba937b24dbea37f4be 158 Gene3D G3DSA:2.60.260.20 1 71 7.3E-20 T 28-03-2018 AM393_RS06905 cd76b601f8584eba937b24dbea37f4be 158 Gene3D G3DSA:3.30.70.790 72 158 1.7E-32 T 28-03-2018 AM393_RS06905 cd76b601f8584eba937b24dbea37f4be 158 Pfam PF02814 UreE urease accessory protein, N-terminal domain 11 62 3.5E-13 T 28-03-2018 IPR004029 UreE urease accessory, N-terminal AM393_RS06905 cd76b601f8584eba937b24dbea37f4be 158 SUPERFAMILY SSF69287 1 70 6.8E-17 T 28-03-2018 IPR004029 UreE urease accessory, N-terminal AM393_RS06905 cd76b601f8584eba937b24dbea37f4be 158 Hamap MF_00822 Urease accessory protein UreE [ureE]. 2 139 24.474 T 28-03-2018 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 AM393_RS06905 cd76b601f8584eba937b24dbea37f4be 158 Pfam PF05194 UreE urease accessory protein, C-terminal domain 73 158 1.1E-29 T 28-03-2018 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0006461|GO:0016151|GO:0019627 AM393_RS06905 cd76b601f8584eba937b24dbea37f4be 158 SMART SM00988 1 64 1.0E-19 T 28-03-2018 IPR004029 UreE urease accessory, N-terminal AM393_RS06905 cd76b601f8584eba937b24dbea37f4be 158 SUPERFAMILY SSF69737 71 138 1.57E-22 T 28-03-2018 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0006461|GO:0016151|GO:0019627 AM393_RS06905 cd76b601f8584eba937b24dbea37f4be 158 PIRSF PIRSF036402 3 156 1.4E-48 T 28-03-2018 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 AM393_RS03035 868f9528bc64c3fbb792607f64d5d8e0 400 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 9 82 3.3E-20 T 28-03-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 AM393_RS03035 868f9528bc64c3fbb792607f64d5d8e0 400 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 193 398 9.6E-59 T 28-03-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 AM393_RS03035 868f9528bc64c3fbb792607f64d5d8e0 400 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 5 398 6.3E-146 T 28-03-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 AM393_RS03035 868f9528bc64c3fbb792607f64d5d8e0 400 Pfam PF07670 Nucleoside recognition 92 190 1.9E-6 T 28-03-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 AM393_RS22955 fcde31aad6effc2d03826763d401096f 462 Pfam PF02233 NAD(P) transhydrogenase beta subunit 7 460 9.6E-205 T 28-03-2018 IPR034300 NADP transhydrogenase beta-like domain KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 AM393_RS22955 fcde31aad6effc2d03826763d401096f 462 PIRSF PIRSF000204 1 462 2.0E-239 T 28-03-2018 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 AM393_RS22955 fcde31aad6effc2d03826763d401096f 462 SUPERFAMILY SSF52467 289 462 3.13E-78 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AM393_RS22955 fcde31aad6effc2d03826763d401096f 462 Gene3D G3DSA:3.40.50.1220 289 462 1.4E-91 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AM393_RS22870 9fccf0019dd511c1948be32ec5daa25f 530 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 464 481 - T 28-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AM393_RS22870 9fccf0019dd511c1948be32ec5daa25f 530 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 420 511 2.7E-25 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AM393_RS22870 9fccf0019dd511c1948be32ec5daa25f 530 TIGRFAM TIGR00852 pts-Glc: PTS system, maltose and glucose-specific subfamily, IIC component 70 372 8.9E-93 T 28-03-2018 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component GO:0008982|GO:0009401|GO:0016021 AM393_RS22870 9fccf0019dd511c1948be32ec5daa25f 530 Gene3D G3DSA:3.30.1360.60 451 525 6.5E-27 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AM393_RS22870 9fccf0019dd511c1948be32ec5daa25f 530 SUPERFAMILY SSF55604 454 526 5.1E-21 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AM393_RS22870 9fccf0019dd511c1948be32ec5daa25f 530 Pfam PF00367 phosphotransferase system, EIIB 455 486 5.1E-16 T 28-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AM393_RS22870 9fccf0019dd511c1948be32ec5daa25f 530 TIGRFAM TIGR02004 PTS-IIBC-malX: PTS system, maltose and glucose-specific IIBC component 8 525 3.7E-257 T 28-03-2018 IPR011301 PTS system, maltose/glucose-specific IIBC component GO:0008982|GO:0009401 KEGG: 00230+2.7.1.20|KEGG: 00500+2.7.1.208|MetaCyc: PWY-6619 AM393_RS22870 9fccf0019dd511c1948be32ec5daa25f 530 Pfam PF02378 Phosphotransferase system, EIIC 19 361 4.3E-85 T 28-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AM393_RS22160 4507d11a7e76819c4daeb53953db02e5 139 Pfam PF13262 Protein of unknown function (DUF4054) 13 125 1.4E-27 T 28-03-2018 IPR025127 Protein of unknown function DUF4054 AM393_RS02110 4302535755d214a72bb879b3503604a2 620 TIGRFAM TIGR01995 PTS-II-ABC-beta: PTS system, beta-glucoside-specific IIABC component 3 618 4.5E-213 T 28-03-2018 IPR011297 Phosphotransferase system, beta-glucoside-specific IIABC component GO:0005886|GO:0008982|GO:0009401 AM393_RS02110 4302535755d214a72bb879b3503604a2 620 Pfam PF02378 Phosphotransferase system, EIIC 109 393 3.6E-22 T 28-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AM393_RS02110 4302535755d214a72bb879b3503604a2 620 SUPERFAMILY SSF51261 471 616 8.72E-52 T 28-03-2018 IPR011055 Duplicated hybrid motif AM393_RS02110 4302535755d214a72bb879b3503604a2 620 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 536 548 - T 28-03-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 AM393_RS02110 4302535755d214a72bb879b3503604a2 620 Pfam PF00367 phosphotransferase system, EIIB 8 41 1.1E-14 T 28-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AM393_RS02110 4302535755d214a72bb879b3503604a2 620 Gene3D G3DSA:3.30.1360.60 4 79 3.3E-27 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AM393_RS02110 4302535755d214a72bb879b3503604a2 620 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 19 36 - T 28-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AM393_RS02110 4302535755d214a72bb879b3503604a2 620 Gene3D G3DSA:2.70.70.10 465 620 8.0E-59 T 28-03-2018 AM393_RS02110 4302535755d214a72bb879b3503604a2 620 SUPERFAMILY SSF55604 6 77 2.09E-20 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AM393_RS02110 4302535755d214a72bb879b3503604a2 620 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 473 598 2.8E-49 T 28-03-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 AM393_RS02110 4302535755d214a72bb879b3503604a2 620 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 474 594 1.2E-43 T 28-03-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 AM393_RS04315 118901bc9a9bcb6c3e8120385b0dfe8b 176 Pfam PF01047 MarR family 53 112 1.4E-16 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM393_RS04315 118901bc9a9bcb6c3e8120385b0dfe8b 176 Gene3D G3DSA:1.10.10.10 25 169 7.6E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS04315 118901bc9a9bcb6c3e8120385b0dfe8b 176 SMART SM00347 46 148 3.6E-32 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM393_RS04315 118901bc9a9bcb6c3e8120385b0dfe8b 176 ProSitePatterns PS01117 MarR-type HTH domain signature. 87 121 - T 28-03-2018 IPR023187 Transcriptional regulator MarR-type, conserved site AM393_RS04315 118901bc9a9bcb6c3e8120385b0dfe8b 176 PRINTS PR00598 Bacterial regulatory protein MarR family signature 72 88 2.2E-24 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM393_RS04315 118901bc9a9bcb6c3e8120385b0dfe8b 176 PRINTS PR00598 Bacterial regulatory protein MarR family signature 138 158 2.2E-24 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM393_RS04315 118901bc9a9bcb6c3e8120385b0dfe8b 176 PRINTS PR00598 Bacterial regulatory protein MarR family signature 89 104 2.2E-24 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM393_RS04315 118901bc9a9bcb6c3e8120385b0dfe8b 176 PRINTS PR00598 Bacterial regulatory protein MarR family signature 108 124 2.2E-24 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM393_RS04315 118901bc9a9bcb6c3e8120385b0dfe8b 176 SUPERFAMILY SSF46785 22 166 5.19E-28 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS10275 98f3022800afa88d435ce31b9a362a93 240 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 39 55 8.0E-9 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM393_RS10275 98f3022800afa88d435ce31b9a362a93 240 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 25 39 8.0E-9 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM393_RS10275 98f3022800afa88d435ce31b9a362a93 240 SMART SM00866 86 225 1.2E-34 T 28-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AM393_RS10275 98f3022800afa88d435ce31b9a362a93 240 SMART SM00345 6 65 3.5E-22 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM393_RS10275 98f3022800afa88d435ce31b9a362a93 240 Pfam PF00392 Bacterial regulatory proteins, gntR family 3 65 1.3E-21 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM393_RS10275 98f3022800afa88d435ce31b9a362a93 240 SUPERFAMILY SSF46785 2 69 2.77E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS10275 98f3022800afa88d435ce31b9a362a93 240 Pfam PF07702 UTRA domain 87 224 1.7E-32 T 28-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AM393_RS10275 98f3022800afa88d435ce31b9a362a93 240 Gene3D G3DSA:1.10.10.10 1 67 3.3E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS10275 98f3022800afa88d435ce31b9a362a93 240 SUPERFAMILY SSF64288 53 232 2.2E-48 T 28-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AM393_RS10275 98f3022800afa88d435ce31b9a362a93 240 Gene3D G3DSA:3.40.1410.10 68 233 2.1E-40 T 28-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AM393_RS02535 a1e5ac8d712c1148e273237120df4568 448 Gene3D G3DSA:1.20.1250.20 240 448 1.4E-30 T 28-03-2018 AM393_RS02535 a1e5ac8d712c1148e273237120df4568 448 PIRSF PIRSF002808 5 448 9.3E-173 T 28-03-2018 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 AM393_RS02535 a1e5ac8d712c1148e273237120df4568 448 ProSitePatterns PS00942 glpT family of transporters signature. 153 169 - T 28-03-2018 IPR021159 Glycerate/sugar phosphate transporter, conserved site GO:0005215|GO:0006810|GO:0016021 Reactome: R-HSA-70153 AM393_RS02535 a1e5ac8d712c1148e273237120df4568 448 Gene3D G3DSA:1.20.1250.20 18 224 3.0E-34 T 28-03-2018 AM393_RS02535 a1e5ac8d712c1148e273237120df4568 448 SUPERFAMILY SSF103473 13 441 1.44E-83 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS02535 a1e5ac8d712c1148e273237120df4568 448 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 35 417 1.5E-165 T 28-03-2018 AM393_RS02535 a1e5ac8d712c1148e273237120df4568 448 Pfam PF07690 Major Facilitator Superfamily 34 400 7.0E-45 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS02535 a1e5ac8d712c1148e273237120df4568 448 TIGRFAM TIGR00712 glpT: glycerol-3-phosphate transporter 1 440 1.6E-263 T 28-03-2018 IPR005267 Glycerol-3-phosphate transporter GO:0015169|GO:0015794|GO:0016021 AM393_RS08865 39cb446a8cb6752c78f92a4f7bd8a67f 308 Gene3D G3DSA:1.10.3470.10 4 299 1.8E-52 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AM393_RS08865 39cb446a8cb6752c78f92a4f7bd8a67f 308 Pfam PF02653 Branched-chain amino acid transport system / permease component 12 292 3.2E-69 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AM393_RS28325 40c3fa376b50a1e9efb40562b8102451 145 Gene3D G3DSA:3.40.140.10 36 145 1.6E-35 T 28-03-2018 AM393_RS28325 40c3fa376b50a1e9efb40562b8102451 145 Pfam PF04002 RadC-like JAB domain 44 143 4.0E-34 T 28-03-2018 IPR025657 RadC-like JAB domain AM393_RS28325 40c3fa376b50a1e9efb40562b8102451 145 SUPERFAMILY SSF102712 71 123 5.62E-6 T 28-03-2018 AM393_RS00930 230454ff61b673ed1b6a87056e253124 207 ProSitePatterns PS00622 LuxR-type HTH domain signature. 152 179 - T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS00930 230454ff61b673ed1b6a87056e253124 207 SUPERFAMILY SSF46894 122 188 3.74E-11 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM393_RS00930 230454ff61b673ed1b6a87056e253124 207 Gene3D G3DSA:1.10.10.10 21 200 1.3E-7 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS00930 230454ff61b673ed1b6a87056e253124 207 SMART SM00421 135 192 1.4E-10 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS00930 230454ff61b673ed1b6a87056e253124 207 Pfam PF00196 Bacterial regulatory proteins, luxR family 137 191 1.7E-17 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS00930 230454ff61b673ed1b6a87056e253124 207 Hamap MF_00982 Transcriptional regulatory protein RcsA [rcsA]. 1 207 47.303 T 28-03-2018 IPR030866 Transcriptional regulatory protein RcsA GO:0006355 AM393_RS00930 230454ff61b673ed1b6a87056e253124 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 138 152 6.2E-8 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS00930 230454ff61b673ed1b6a87056e253124 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 180 6.2E-8 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS00930 230454ff61b673ed1b6a87056e253124 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 152 168 6.2E-8 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS14725 196170e73919fce14b238bd50c50ddf0 298 Pfam PF03466 LysR substrate binding domain 89 289 1.2E-32 T 28-03-2018 IPR005119 LysR, substrate-binding AM393_RS14725 196170e73919fce14b238bd50c50ddf0 298 SUPERFAMILY SSF53850 92 292 6.21E-32 T 28-03-2018 AM393_RS14725 196170e73919fce14b238bd50c50ddf0 298 Gene3D G3DSA:3.40.190.10 88 177 9.0E-16 T 28-03-2018 AM393_RS14725 196170e73919fce14b238bd50c50ddf0 298 Gene3D G3DSA:1.10.10.10 1 82 1.0E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS14725 196170e73919fce14b238bd50c50ddf0 298 Gene3D G3DSA:3.40.190.10 178 263 1.2E-13 T 28-03-2018 AM393_RS14725 196170e73919fce14b238bd50c50ddf0 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 4.6E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS14725 196170e73919fce14b238bd50c50ddf0 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 4.6E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS14725 196170e73919fce14b238bd50c50ddf0 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 4.6E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS14725 196170e73919fce14b238bd50c50ddf0 298 SUPERFAMILY SSF46785 1 83 5.3E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS14725 196170e73919fce14b238bd50c50ddf0 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 2.1E-17 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS20770 db582a95d7feb8e6f804a62ffbfce30d 269 Gene3D G3DSA:3.20.10.10 121 265 7.9E-33 T 28-03-2018 AM393_RS20770 db582a95d7feb8e6f804a62ffbfce30d 269 TIGRFAM TIGR03461 pabC_Proteo: aminodeoxychorismate lyase 3 262 5.9E-111 T 28-03-2018 IPR017824 Aminodeoxychorismate lyase, class IV GO:0008696|GO:0030170|GO:0046656 KEGG: 00790+4.1.3.38|MetaCyc: PWY-6543 AM393_RS20770 db582a95d7feb8e6f804a62ffbfce30d 269 SUPERFAMILY SSF56752 2 263 2.09E-68 T 28-03-2018 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 AM393_RS20770 db582a95d7feb8e6f804a62ffbfce30d 269 ProSitePatterns PS00770 Aminotransferases class-IV signature. 173 202 - T 28-03-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: R-HSA-70895 AM393_RS20770 db582a95d7feb8e6f804a62ffbfce30d 269 Pfam PF01063 Amino-transferase class IV 24 247 2.3E-47 T 28-03-2018 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 AM393_RS20770 db582a95d7feb8e6f804a62ffbfce30d 269 Gene3D G3DSA:3.30.470.10 1 110 9.2E-23 T 28-03-2018 AM393_RS17945 87ba1322d1de473289799862d9c76126 506 SUPERFAMILY SSF53067 258 499 6.29E-59 T 28-03-2018 AM393_RS17945 87ba1322d1de473289799862d9c76126 506 Gene3D G3DSA:3.30.420.40 250 501 2.2E-56 T 28-03-2018 AM393_RS17945 87ba1322d1de473289799862d9c76126 506 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 367 387 - T 28-03-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AM393_RS17945 87ba1322d1de473289799862d9c76126 506 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 263 454 2.6E-43 T 28-03-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 AM393_RS17945 87ba1322d1de473289799862d9c76126 506 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 9 253 1.4E-60 T 28-03-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 AM393_RS17945 87ba1322d1de473289799862d9c76126 506 Gene3D G3DSA:3.30.420.40 3 249 1.9E-67 T 28-03-2018 AM393_RS17945 87ba1322d1de473289799862d9c76126 506 PIRSF PIRSF000538 6 505 1.6E-128 T 28-03-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AM393_RS17945 87ba1322d1de473289799862d9c76126 506 SUPERFAMILY SSF53067 8 254 7.13E-72 T 28-03-2018 AM393_RS00075 a7393d3947003bc01e0baf82940d6e17 565 PRINTS PR01021 OMPA domain signature 481 497 9.7E-9 T 28-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AM393_RS00075 a7393d3947003bc01e0baf82940d6e17 565 PRINTS PR01021 OMPA domain signature 436 458 9.7E-9 T 28-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AM393_RS00075 a7393d3947003bc01e0baf82940d6e17 565 PRINTS PR01021 OMPA domain signature 466 481 9.7E-9 T 28-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AM393_RS00075 a7393d3947003bc01e0baf82940d6e17 565 Pfam PF00691 OmpA family 435 531 6.4E-19 T 28-03-2018 IPR006665 OmpA-like domain AM393_RS00075 a7393d3947003bc01e0baf82940d6e17 565 Gene3D G3DSA:3.30.1330.60 356 564 3.0E-35 T 28-03-2018 IPR006665 OmpA-like domain AM393_RS00075 a7393d3947003bc01e0baf82940d6e17 565 SUPERFAMILY SSF103088 410 536 2.09E-33 T 28-03-2018 IPR006665 OmpA-like domain AM393_RS05990 80ecedc2e30e4b36e7011174d4c5c8f9 297 Pfam PF03466 LysR substrate binding domain 93 287 1.9E-13 T 28-03-2018 IPR005119 LysR, substrate-binding AM393_RS05990 80ecedc2e30e4b36e7011174d4c5c8f9 297 Gene3D G3DSA:3.40.190.10 179 262 2.0E-9 T 28-03-2018 AM393_RS05990 80ecedc2e30e4b36e7011174d4c5c8f9 297 Gene3D G3DSA:1.10.10.10 2 83 1.0E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS05990 80ecedc2e30e4b36e7011174d4c5c8f9 297 Gene3D G3DSA:3.40.190.10 92 178 5.3E-36 T 28-03-2018 AM393_RS05990 80ecedc2e30e4b36e7011174d4c5c8f9 297 SUPERFAMILY SSF53850 92 289 7.6E-20 T 28-03-2018 AM393_RS05990 80ecedc2e30e4b36e7011174d4c5c8f9 297 TIGRFAM TIGR03298 argP: transcriptional regulator, ArgP family 5 293 1.3E-113 T 28-03-2018 IPR017685 HTH-type transcriptional regulator ArgP AM393_RS05990 80ecedc2e30e4b36e7011174d4c5c8f9 297 SUPERFAMILY SSF46785 4 111 6.72E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS05990 80ecedc2e30e4b36e7011174d4c5c8f9 297 Hamap MF_00513 HTH-type transcriptional regulator ArgP [argP]. 1 296 58.492 T 28-03-2018 IPR023490 HTH-type transcriptional regulator ArgP, Gammaproteobacteria AM393_RS05990 80ecedc2e30e4b36e7011174d4c5c8f9 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 5.5E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS05990 80ecedc2e30e4b36e7011174d4c5c8f9 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 5.5E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS05990 80ecedc2e30e4b36e7011174d4c5c8f9 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 5.5E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS05990 80ecedc2e30e4b36e7011174d4c5c8f9 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 1.1E-18 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS21305 6de485a019d4dae4285d4550db1b5c90 315 PRINTS PR00990 Ribokinase signature 185 200 1.9E-5 T 28-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AM393_RS21305 6de485a019d4dae4285d4550db1b5c90 315 PRINTS PR00990 Ribokinase signature 224 235 1.9E-5 T 28-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AM393_RS21305 6de485a019d4dae4285d4550db1b5c90 315 PRINTS PR00990 Ribokinase signature 36 55 1.9E-5 T 28-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AM393_RS21305 6de485a019d4dae4285d4550db1b5c90 315 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 254 267 - T 28-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AM393_RS21305 6de485a019d4dae4285d4550db1b5c90 315 Gene3D G3DSA:3.40.1190.20 1 315 4.4E-66 T 28-03-2018 IPR029056 Ribokinase-like AM393_RS21305 6de485a019d4dae4285d4550db1b5c90 315 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 41 65 - T 28-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AM393_RS21305 6de485a019d4dae4285d4550db1b5c90 315 SUPERFAMILY SSF53613 1 300 2.42E-70 T 28-03-2018 IPR029056 Ribokinase-like AM393_RS21305 6de485a019d4dae4285d4550db1b5c90 315 Pfam PF00294 pfkB family carbohydrate kinase 5 300 2.7E-68 T 28-03-2018 IPR011611 Carbohydrate kinase PfkB AM393_RS03730 aa37fd2b0fd9e156ac734122249c5ab8 1295 SUPERFAMILY SSF55326 618 816 1.33E-67 T 28-03-2018 IPR016188 PurM-like, N-terminal domain AM393_RS03730 aa37fd2b0fd9e156ac734122249c5ab8 1295 SUPERFAMILY SSF55326 221 428 1.01E-63 T 28-03-2018 IPR016188 PurM-like, N-terminal domain AM393_RS03730 aa37fd2b0fd9e156ac734122249c5ab8 1295 Gene3D G3DSA:3.30.1330.10 612 813 1.9E-22 T 28-03-2018 IPR016188 PurM-like, N-terminal domain AM393_RS03730 aa37fd2b0fd9e156ac734122249c5ab8 1295 Gene3D G3DSA:3.30.1330.10 183 218 9.3E-4 T 28-03-2018 IPR016188 PurM-like, N-terminal domain AM393_RS03730 aa37fd2b0fd9e156ac734122249c5ab8 1295 Gene3D G3DSA:3.30.1330.10 219 425 7.7E-52 T 28-03-2018 IPR016188 PurM-like, N-terminal domain AM393_RS03730 aa37fd2b0fd9e156ac734122249c5ab8 1295 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 2 1295 21.617 T 28-03-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AM393_RS03730 aa37fd2b0fd9e156ac734122249c5ab8 1295 SUPERFAMILY SSF82697 1 152 1.05E-51 T 28-03-2018 AM393_RS03730 aa37fd2b0fd9e156ac734122249c5ab8 1295 SUPERFAMILY SSF109736 155 220 8.24E-22 T 28-03-2018 AM393_RS03730 aa37fd2b0fd9e156ac734122249c5ab8 1295 SUPERFAMILY SSF56042 818 1033 1.18E-56 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain AM393_RS03730 aa37fd2b0fd9e156ac734122249c5ab8 1295 SMART SM01211 1039 1294 4.0E-157 T 28-03-2018 AM393_RS03730 aa37fd2b0fd9e156ac734122249c5ab8 1295 Pfam PF02769 AIR synthase related protein, C-terminal domain 432 589 5.3E-27 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain AM393_RS03730 aa37fd2b0fd9e156ac734122249c5ab8 1295 Pfam PF02769 AIR synthase related protein, C-terminal domain 828 966 9.3E-14 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain AM393_RS03730 aa37fd2b0fd9e156ac734122249c5ab8 1295 Gene3D G3DSA:3.90.650.10 426 609 7.2E-30 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain AM393_RS03730 aa37fd2b0fd9e156ac734122249c5ab8 1295 Gene3D G3DSA:3.90.650.10 821 994 6.5E-30 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain AM393_RS03730 aa37fd2b0fd9e156ac734122249c5ab8 1295 SUPERFAMILY SSF56042 431 615 4.78E-53 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain AM393_RS03730 aa37fd2b0fd9e156ac734122249c5ab8 1295 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 4 1293 0.0 T 28-03-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AM393_RS03730 aa37fd2b0fd9e156ac734122249c5ab8 1295 Gene3D G3DSA:3.40.50.880 1038 1294 2.0E-31 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AM393_RS03730 aa37fd2b0fd9e156ac734122249c5ab8 1295 SUPERFAMILY SSF52317 1035 1293 3.99E-98 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AM393_RS03730 aa37fd2b0fd9e156ac734122249c5ab8 1295 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1039 1292 3.2E-103 T 28-03-2018 AM393_RS10035 736fbda9a686fc1381c586c10c19742e 387 Gene3D G3DSA:1.20.1250.20 197 385 1.4E-18 T 28-03-2018 AM393_RS10035 736fbda9a686fc1381c586c10c19742e 387 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 7 377 2.6E-84 T 28-03-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 AM393_RS10035 736fbda9a686fc1381c586c10c19742e 387 SUPERFAMILY SSF103473 8 380 1.31E-61 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS10035 736fbda9a686fc1381c586c10c19742e 387 Gene3D G3DSA:1.20.1250.20 1 196 5.0E-32 T 28-03-2018 AM393_RS10035 736fbda9a686fc1381c586c10c19742e 387 Pfam PF07690 Major Facilitator Superfamily 19 352 1.6E-46 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS18935 fa4b1314eea62972bd0aafe941b0ea27 135 Pfam PF00689 Cation transporting ATPase, C-terminus 3 126 1.2E-21 T 28-03-2018 IPR006068 Cation-transporting P-type ATPase, C-terminal Reactome: R-HSA-936837 AM393_RS18935 fa4b1314eea62972bd0aafe941b0ea27 135 SUPERFAMILY SSF81665 4 133 1.57E-22 T 28-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 AM393_RS18935 fa4b1314eea62972bd0aafe941b0ea27 135 Gene3D G3DSA:1.20.1110.10 1 135 1.0E-18 T 28-03-2018 AM393_RS18090 0f6d1b8370432506a25272ea15787b29 354 Gene3D G3DSA:3.40.50.2300 29 159 2.9E-16 T 28-03-2018 AM393_RS18090 0f6d1b8370432506a25272ea15787b29 354 Gene3D G3DSA:3.40.50.2300 160 303 6.4E-21 T 28-03-2018 AM393_RS18090 0f6d1b8370432506a25272ea15787b29 354 SUPERFAMILY SSF53822 38 308 4.93E-44 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AM393_RS18090 0f6d1b8370432506a25272ea15787b29 354 Pfam PF13407 Periplasmic binding protein domain 52 298 1.6E-28 T 28-03-2018 IPR025997 Periplasmic binding protein AM393_RS16255 ac8aaed0f4adaa3b3b9b06c28e0279b1 375 Pfam PF01702 Queuine tRNA-ribosyltransferase 126 361 3.8E-93 T 28-03-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 AM393_RS16255 ac8aaed0f4adaa3b3b9b06c28e0279b1 375 SUPERFAMILY SSF51713 1 364 3.92E-163 T 28-03-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 AM393_RS16255 ac8aaed0f4adaa3b3b9b06c28e0279b1 375 Gene3D G3DSA:3.20.20.105 1 369 6.7E-160 T 28-03-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 AM393_RS16255 ac8aaed0f4adaa3b3b9b06c28e0279b1 375 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 3 368 5.1E-181 T 28-03-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 AM393_RS16255 ac8aaed0f4adaa3b3b9b06c28e0279b1 375 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 3 368 2.8E-191 T 28-03-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 AM393_RS16255 ac8aaed0f4adaa3b3b9b06c28e0279b1 375 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 1 364 57.781 T 28-03-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 AM393_RS12020 dc3cb0909ed252d72f533e6ff305551b 396 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 133 150 - T 28-03-2018 IPR006061 Solute-binding family 1, conserved site GO:0006810 AM393_RS12020 dc3cb0909ed252d72f533e6ff305551b 396 Pfam PF13416 Bacterial extracellular solute-binding protein 50 341 6.3E-41 T 28-03-2018 AM393_RS12020 dc3cb0909ed252d72f533e6ff305551b 396 Gene3D G3DSA:3.40.190.10 155 396 4.0E-41 T 28-03-2018 AM393_RS12020 dc3cb0909ed252d72f533e6ff305551b 396 PRINTS PR00181 Maltose binding protein signature 299 320 7.1E-101 T 28-03-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0006810 AM393_RS12020 dc3cb0909ed252d72f533e6ff305551b 396 PRINTS PR00181 Maltose binding protein signature 357 376 7.1E-101 T 28-03-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0006810 AM393_RS12020 dc3cb0909ed252d72f533e6ff305551b 396 PRINTS PR00181 Maltose binding protein signature 233 252 7.1E-101 T 28-03-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0006810 AM393_RS12020 dc3cb0909ed252d72f533e6ff305551b 396 PRINTS PR00181 Maltose binding protein signature 70 88 7.1E-101 T 28-03-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0006810 AM393_RS12020 dc3cb0909ed252d72f533e6ff305551b 396 PRINTS PR00181 Maltose binding protein signature 130 149 7.1E-101 T 28-03-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0006810 AM393_RS12020 dc3cb0909ed252d72f533e6ff305551b 396 PRINTS PR00181 Maltose binding protein signature 151 170 7.1E-101 T 28-03-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0006810 AM393_RS12020 dc3cb0909ed252d72f533e6ff305551b 396 PRINTS PR00181 Maltose binding protein signature 171 190 7.1E-101 T 28-03-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0006810 AM393_RS12020 dc3cb0909ed252d72f533e6ff305551b 396 PRINTS PR00181 Maltose binding protein signature 36 54 7.1E-101 T 28-03-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0006810 AM393_RS12020 dc3cb0909ed252d72f533e6ff305551b 396 SUPERFAMILY SSF53850 29 395 1.63E-96 T 28-03-2018 AM393_RS12020 dc3cb0909ed252d72f533e6ff305551b 396 Gene3D G3DSA:3.40.190.10 23 154 9.8E-25 T 28-03-2018 AM393_RS15085 8a48ae95bc17640a2df71593f73bf436 417 Pfam PF01522 Polysaccharide deacetylase 236 375 1.7E-20 T 28-03-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 AM393_RS15085 8a48ae95bc17640a2df71593f73bf436 417 Gene3D G3DSA:3.20.20.370 178 414 2.6E-37 T 28-03-2018 AM393_RS15085 8a48ae95bc17640a2df71593f73bf436 417 Gene3D G3DSA:2.40.50.110 110 170 0.0012 T 28-03-2018 AM393_RS15085 8a48ae95bc17640a2df71593f73bf436 417 SUPERFAMILY SSF88713 199 389 4.45E-31 T 28-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AM393_RS28080 01f30d3c7f2c42508abfdfe84f8e09b1 718 Gene3D G3DSA:3.40.50.150 198 592 1.3E-40 T 28-03-2018 AM393_RS28080 01f30d3c7f2c42508abfdfe84f8e09b1 718 Pfam PF12161 HsdM N-terminal domain 16 151 8.4E-21 T 28-03-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain AM393_RS28080 01f30d3c7f2c42508abfdfe84f8e09b1 718 SUPERFAMILY SSF53335 15 53 1.72E-104 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM393_RS28080 01f30d3c7f2c42508abfdfe84f8e09b1 718 SUPERFAMILY SSF53335 84 570 1.72E-104 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM393_RS28080 01f30d3c7f2c42508abfdfe84f8e09b1 718 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 315 321 - T 28-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AM393_RS28080 01f30d3c7f2c42508abfdfe84f8e09b1 718 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 312 324 7.4E-11 T 28-03-2018 AM393_RS28080 01f30d3c7f2c42508abfdfe84f8e09b1 718 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 231 245 7.4E-11 T 28-03-2018 AM393_RS28080 01f30d3c7f2c42508abfdfe84f8e09b1 718 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 200 216 7.4E-11 T 28-03-2018 AM393_RS28080 01f30d3c7f2c42508abfdfe84f8e09b1 718 Pfam PF02384 N-6 DNA Methylase 177 493 1.4E-52 T 28-03-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 AM393_RS07650 25ef2e211ad3bd7bceaa2c6328ada545 325 Pfam PF01699 Sodium/calcium exchanger protein 176 317 1.1E-26 T 28-03-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 AM393_RS07650 25ef2e211ad3bd7bceaa2c6328ada545 325 Pfam PF01699 Sodium/calcium exchanger protein 4 144 2.9E-28 T 28-03-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 AM393_RS07650 25ef2e211ad3bd7bceaa2c6328ada545 325 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 2 312 6.7E-97 T 28-03-2018 IPR004481 Sodium/potassium/calcium exchanger Reactome: R-HSA-425561 AM393_RS03090 f5037ca97dda21a8b52fcf94b45143a3 308 Gene3D G3DSA:3.40.190.10 179 268 2.5E-20 T 28-03-2018 AM393_RS03090 f5037ca97dda21a8b52fcf94b45143a3 308 Gene3D G3DSA:1.10.10.10 1 85 2.7E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS03090 f5037ca97dda21a8b52fcf94b45143a3 308 Gene3D G3DSA:3.40.190.10 89 178 4.1E-23 T 28-03-2018 AM393_RS03090 f5037ca97dda21a8b52fcf94b45143a3 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 6.6E-22 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS03090 f5037ca97dda21a8b52fcf94b45143a3 308 SUPERFAMILY SSF53850 89 296 1.33E-42 T 28-03-2018 AM393_RS03090 f5037ca97dda21a8b52fcf94b45143a3 308 Pfam PF03466 LysR substrate binding domain 89 292 1.5E-45 T 28-03-2018 IPR005119 LysR, substrate-binding AM393_RS03090 f5037ca97dda21a8b52fcf94b45143a3 308 SUPERFAMILY SSF46785 3 113 1.56E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS03090 f5037ca97dda21a8b52fcf94b45143a3 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 1.9E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS03090 f5037ca97dda21a8b52fcf94b45143a3 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 1.9E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS03090 f5037ca97dda21a8b52fcf94b45143a3 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 1.9E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS10295 085b6c1a21d8b2bb7a93e1082ee7734c 137 Pfam PF00011 Hsp20/alpha crystallin family 42 137 3.0E-22 T 28-03-2018 IPR002068 Alpha crystallin/Hsp20 domain AM393_RS10295 085b6c1a21d8b2bb7a93e1082ee7734c 137 SUPERFAMILY SSF49764 30 137 1.05E-19 T 28-03-2018 IPR008978 HSP20-like chaperone AM393_RS10295 085b6c1a21d8b2bb7a93e1082ee7734c 137 Gene3D G3DSA:2.60.40.790 5 137 2.2E-20 T 28-03-2018 IPR008978 HSP20-like chaperone AM393_RS10295 085b6c1a21d8b2bb7a93e1082ee7734c 137 Hamap MF_02000 Small heat shock protein IbpA [ibpA]. 1 137 49.656 T 28-03-2018 IPR023728 Small heat shock protein IbpA AM393_RS05505 b205701e25251f2c005faf6052cbe7e5 237 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 79 88 - T 28-03-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM393_RS05505 b205701e25251f2c005faf6052cbe7e5 237 SUPERFAMILY SSF53681 118 229 7.36E-30 T 28-03-2018 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM393_RS05505 b205701e25251f2c005faf6052cbe7e5 237 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 193 203 - T 28-03-2018 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM393_RS05505 b205701e25251f2c005faf6052cbe7e5 237 SUPERFAMILY SSF53681 1 116 5.89E-37 T 28-03-2018 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM393_RS05505 b205701e25251f2c005faf6052cbe7e5 237 Gene3D G3DSA:3.40.50.1860 1 117 6.8E-32 T 28-03-2018 AM393_RS05505 b205701e25251f2c005faf6052cbe7e5 237 Pfam PF01177 Asp/Glu/Hydantoin racemase 7 224 6.2E-57 T 28-03-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM393_RS05505 b205701e25251f2c005faf6052cbe7e5 237 Gene3D G3DSA:3.40.50.1860 118 215 1.1E-22 T 28-03-2018 AM393_RS05505 b205701e25251f2c005faf6052cbe7e5 237 TIGRFAM TIGR00035 asp_race: aspartate racemase 1 230 1.1E-65 T 28-03-2018 IPR004380 Aspartate racemase GO:0006520|GO:0016855 AM393_RS02670 dcf2970f1560cf31053adf0b95827736 325 ProSitePatterns PS00667 Respiratory-chain NADH dehydrogenase subunit 1 signature 1. 56 71 - T 28-03-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM393_RS02670 dcf2970f1560cf31053adf0b95827736 325 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 10 323 24.054 T 28-03-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM393_RS02670 dcf2970f1560cf31053adf0b95827736 325 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 211 224 - T 28-03-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM393_RS02670 dcf2970f1560cf31053adf0b95827736 325 Pfam PF00146 NADH dehydrogenase 17 317 8.0E-121 T 28-03-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM393_RS07430 85206927715211f84735fcd1dc201bc6 331 ProSitePatterns PS01276 Peptidase family U32 signature. 161 179 - T 28-03-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 AM393_RS07430 85206927715211f84735fcd1dc201bc6 331 Pfam PF01136 Peptidase family U32 76 330 1.2E-66 T 28-03-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 AM393_RS07430 85206927715211f84735fcd1dc201bc6 331 Gene3D G3DSA:3.20.20.150 9 328 1.2E-18 T 28-03-2018 AM393_RS07430 85206927715211f84735fcd1dc201bc6 331 SUPERFAMILY SSF51391 11 162 1.78E-6 T 28-03-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AM393_RS12945 be4f09829e7cfeadf805b8c9060f0a49 224 Pfam PF04225 Opacity-associated protein A LysM-like domain 139 223 8.1E-34 T 28-03-2018 IPR007340 Opacity-associated protein A AM393_RS12945 be4f09829e7cfeadf805b8c9060f0a49 224 Pfam PF08525 Opacity-associated protein A N-terminal motif 24 50 7.0E-8 T 28-03-2018 IPR013731 Opacity-associated protein A, N-terminal AM393_RS12945 be4f09829e7cfeadf805b8c9060f0a49 224 Gene3D G3DSA:3.10.350.10 136 195 4.4E-4 T 28-03-2018 AM393_RS12810 343ba142dd9b9800d0e285877837e731 426 SUPERFAMILY SSF54980 365 421 9.35E-14 T 28-03-2018 IPR035647 EF-G domain III/V-like AM393_RS12810 343ba142dd9b9800d0e285877837e731 426 PIRSF PIRSF006809 3 420 7.5E-150 T 28-03-2018 IPR016496 GTPase HflX GO:0005525 AM393_RS12810 343ba142dd9b9800d0e285877837e731 426 Gene3D G3DSA:3.40.50.300 165 228 4.8E-11 T 28-03-2018 AM393_RS12810 343ba142dd9b9800d0e285877837e731 426 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 267 285 2.7E-10 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 AM393_RS12810 343ba142dd9b9800d0e285877837e731 426 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 221 239 2.7E-10 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 AM393_RS12810 343ba142dd9b9800d0e285877837e731 426 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 200 220 2.7E-10 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 AM393_RS12810 343ba142dd9b9800d0e285877837e731 426 Pfam PF16360 GTP-binding GTPase Middle Region 114 192 3.0E-29 T 28-03-2018 IPR032305 GTP-binding protein, middle domain AM393_RS12810 343ba142dd9b9800d0e285877837e731 426 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 10 361 4.9E-154 T 28-03-2018 IPR016496 GTPase HflX GO:0005525 AM393_RS12810 343ba142dd9b9800d0e285877837e731 426 Hamap MF_00900 GTPase HflX [hflX]. 27 390 46.79 T 28-03-2018 IPR016496 GTPase HflX GO:0005525 AM393_RS12810 343ba142dd9b9800d0e285877837e731 426 Pfam PF13167 GTP-binding GTPase N-terminal 25 112 2.0E-30 T 28-03-2018 IPR025121 GTPase HflX, N-terminal AM393_RS12810 343ba142dd9b9800d0e285877837e731 426 SUPERFAMILY SSF52540 197 372 2.53E-39 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS12810 343ba142dd9b9800d0e285877837e731 426 Pfam PF01926 50S ribosome-binding GTPase 200 318 3.3E-20 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 AM393_RS12810 343ba142dd9b9800d0e285877837e731 426 Gene3D G3DSA:3.40.50.300 229 395 6.0E-16 T 28-03-2018 AM393_RS27495 d69db56ddb212cf7cb62202c489cae5f 169 PRINTS PR00783 Major intrinsic protein family signature 34 53 2.8E-15 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AM393_RS27495 d69db56ddb212cf7cb62202c489cae5f 169 PRINTS PR00783 Major intrinsic protein family signature 139 159 2.8E-15 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AM393_RS27495 d69db56ddb212cf7cb62202c489cae5f 169 PRINTS PR00783 Major intrinsic protein family signature 102 124 2.8E-15 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AM393_RS27495 d69db56ddb212cf7cb62202c489cae5f 169 Gene3D G3DSA:1.20.1080.10 7 168 1.5E-41 T 28-03-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 AM393_RS27495 d69db56ddb212cf7cb62202c489cae5f 169 Pfam PF00230 Major intrinsic protein 12 152 1.5E-29 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AM393_RS27495 d69db56ddb212cf7cb62202c489cae5f 169 SUPERFAMILY SSF81338 12 163 9.29E-42 T 28-03-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 AM393_RS02095 3b5c40c3aacc86aac6fe441f461ffc80 479 SUPERFAMILY SSF56954 6 474 2.09E-81 T 28-03-2018 AM393_RS02095 3b5c40c3aacc86aac6fe441f461ffc80 479 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 15 473 3.2E-87 T 28-03-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 AM393_RS02095 3b5c40c3aacc86aac6fe441f461ffc80 479 Gene3D G3DSA:1.20.1600.10 23 479 1.9E-69 T 28-03-2018 AM393_RS02095 3b5c40c3aacc86aac6fe441f461ffc80 479 Pfam PF02321 Outer membrane efflux protein 291 471 1.7E-14 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AM393_RS02095 3b5c40c3aacc86aac6fe441f461ffc80 479 Pfam PF02321 Outer membrane efflux protein 67 264 2.2E-18 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AM393_RS10790 82a2dbb9aedd7f5c7e07b35633dad5a9 278 SUPERFAMILY SSF53927 22 276 5.72E-78 T 28-03-2018 IPR016193 Cytidine deaminase-like GO:0003824 AM393_RS10790 82a2dbb9aedd7f5c7e07b35633dad5a9 278 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 34 276 5.2E-96 T 28-03-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 AM393_RS10790 82a2dbb9aedd7f5c7e07b35633dad5a9 278 Gene3D G3DSA:3.40.140.10 142 278 1.1E-42 T 28-03-2018 AM393_RS10790 82a2dbb9aedd7f5c7e07b35633dad5a9 278 Pfam PF02634 FdhD/NarQ family 38 275 3.6E-69 T 28-03-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 AM393_RS10790 82a2dbb9aedd7f5c7e07b35633dad5a9 278 Gene3D G3DSA:3.10.20.10 40 126 3.0E-22 T 28-03-2018 AM393_RS10790 82a2dbb9aedd7f5c7e07b35633dad5a9 278 Hamap MF_00187 Sulfurtransferase FdhD [fdhD]. 13 276 33.02 T 28-03-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 AM393_RS10790 82a2dbb9aedd7f5c7e07b35633dad5a9 278 PIRSF PIRSF015626 3 278 3.6E-81 T 28-03-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 AM393_RS00380 60b897de64d85dfec691e3ddaa16a994 451 SUPERFAMILY SSF56322 4 449 1.27E-142 T 28-03-2018 IPR005801 ADC synthase GO:0009058 AM393_RS00380 60b897de64d85dfec691e3ddaa16a994 451 Pfam PF00425 chorismate binding enzyme 187 441 1.0E-90 T 28-03-2018 IPR015890 Chorismate-utilising enzyme, C-terminal AM393_RS00380 60b897de64d85dfec691e3ddaa16a994 451 PRINTS PR00095 Anthranilate synthase component I signature 398 412 1.3E-18 T 28-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AM393_RS00380 60b897de64d85dfec691e3ddaa16a994 451 PRINTS PR00095 Anthranilate synthase component I signature 289 302 1.3E-18 T 28-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AM393_RS00380 60b897de64d85dfec691e3ddaa16a994 451 PRINTS PR00095 Anthranilate synthase component I signature 383 397 1.3E-18 T 28-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AM393_RS00380 60b897de64d85dfec691e3ddaa16a994 451 PRINTS PR00095 Anthranilate synthase component I signature 303 316 1.3E-18 T 28-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AM393_RS00380 60b897de64d85dfec691e3ddaa16a994 451 Pfam PF04715 Anthranilate synthase component I, N terminal region 19 151 8.0E-26 T 28-03-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AM393_RS00380 60b897de64d85dfec691e3ddaa16a994 451 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 105 445 2.8E-133 T 28-03-2018 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543 AM393_RS00380 60b897de64d85dfec691e3ddaa16a994 451 Gene3D G3DSA:3.60.120.10 2 451 4.0E-153 T 28-03-2018 IPR005801 ADC synthase GO:0009058 AM393_RS22865 62f46c4db9f54136d66bf8bab63d2783 390 Pfam PF00155 Aminotransferase class I and II 30 381 4.4E-54 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AM393_RS22865 62f46c4db9f54136d66bf8bab63d2783 390 TIGRFAM TIGR04350 C_S_lyase_PatB: putative C-S lyase 4 386 1.5E-114 T 28-03-2018 IPR027619 Putative C-S lyase KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8|MetaCyc: PWY-6936 AM393_RS22865 62f46c4db9f54136d66bf8bab63d2783 390 SUPERFAMILY SSF53383 1 388 1.14E-92 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM393_RS22865 62f46c4db9f54136d66bf8bab63d2783 390 Gene3D G3DSA:3.40.640.10 42 269 6.7E-36 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM393_RS22865 62f46c4db9f54136d66bf8bab63d2783 390 Gene3D G3DSA:3.90.1150.10 270 390 2.4E-30 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM393_RS24085 8d9233183a4ab9ddbd5736ef283735e0 290 Gene3D G3DSA:3.40.50.1820 1 284 6.5E-29 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AM393_RS24085 8d9233183a4ab9ddbd5736ef283735e0 290 PIRSF PIRSF037442 1 285 4.6E-87 T 28-03-2018 IPR017208 Uncharacterised conserved protein UCP037442, alpha/beta hydrolase, RSp0795 AM393_RS24085 8d9233183a4ab9ddbd5736ef283735e0 290 Pfam PF12146 Serine aminopeptidase, S33 24 143 3.0E-13 T 28-03-2018 IPR022742 Serine aminopeptidase, S33 AM393_RS24085 8d9233183a4ab9ddbd5736ef283735e0 290 SUPERFAMILY SSF53474 1 282 2.4E-31 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AM393_RS25915 2a9c3b4144a282ba8d656d8d7d10b1e0 353 SMART SM00388 136 200 2.8E-9 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM393_RS25915 2a9c3b4144a282ba8d656d8d7d10b1e0 353 SUPERFAMILY SSF47384 119 195 2.55E-12 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM393_RS25915 2a9c3b4144a282ba8d656d8d7d10b1e0 353 Gene3D G3DSA:3.30.565.10 201 353 1.4E-29 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS25915 2a9c3b4144a282ba8d656d8d7d10b1e0 353 SUPERFAMILY SSF55874 206 353 5.37E-31 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS25915 2a9c3b4144a282ba8d656d8d7d10b1e0 353 Gene3D G3DSA:1.10.287.130 126 195 1.2E-9 T 28-03-2018 AM393_RS25915 2a9c3b4144a282ba8d656d8d7d10b1e0 353 SMART SM00304 81 135 4.1E-5 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM393_RS25915 2a9c3b4144a282ba8d656d8d7d10b1e0 353 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 245 352 1.0E-16 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS25915 2a9c3b4144a282ba8d656d8d7d10b1e0 353 PRINTS PR00344 Bacterial sensor protein C-terminal signature 315 333 6.4E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM393_RS25915 2a9c3b4144a282ba8d656d8d7d10b1e0 353 PRINTS PR00344 Bacterial sensor protein C-terminal signature 280 294 6.4E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM393_RS25915 2a9c3b4144a282ba8d656d8d7d10b1e0 353 PRINTS PR00344 Bacterial sensor protein C-terminal signature 339 352 6.4E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM393_RS25915 2a9c3b4144a282ba8d656d8d7d10b1e0 353 PRINTS PR00344 Bacterial sensor protein C-terminal signature 298 308 6.4E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM393_RS25915 2a9c3b4144a282ba8d656d8d7d10b1e0 353 SUPERFAMILY SSF158472 82 132 1.96E-5 T 28-03-2018 AM393_RS25915 2a9c3b4144a282ba8d656d8d7d10b1e0 353 Pfam PF00512 His Kinase A (phospho-acceptor) domain 139 198 1.3E-7 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM393_RS25915 2a9c3b4144a282ba8d656d8d7d10b1e0 353 SMART SM00387 244 353 3.0E-19 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS06540 90fab189e69b1e05f683cd2da395e772 442 Pfam PF14903 WG containing repeat 155 188 1.3E-10 T 28-03-2018 IPR032774 WG containing repeat AM393_RS06540 90fab189e69b1e05f683cd2da395e772 442 Pfam PF14903 WG containing repeat 114 143 0.02 T 28-03-2018 IPR032774 WG containing repeat AM393_RS17335 988be94179a3bcc62ea7e44447f657c0 341 Gene3D G3DSA:2.60.40.1090 191 341 3.4E-32 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM393_RS17335 988be94179a3bcc62ea7e44447f657c0 341 SUPERFAMILY SSF49401 198 341 3.58E-28 T 28-03-2018 IPR008966 Adhesion domain AM393_RS17335 988be94179a3bcc62ea7e44447f657c0 341 Pfam PF00419 Fimbrial protein 197 341 2.4E-16 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM393_RS19940 7c7f0b152f1056b8cc14dc50abf982e5 382 SUPERFAMILY SSF103473 7 370 1.96E-43 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS19940 7c7f0b152f1056b8cc14dc50abf982e5 382 Pfam PF07690 Major Facilitator Superfamily 210 370 1.9E-13 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS19940 7c7f0b152f1056b8cc14dc50abf982e5 382 Pfam PF07690 Major Facilitator Superfamily 11 194 3.2E-13 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS19940 7c7f0b152f1056b8cc14dc50abf982e5 382 Hamap MF_01149 Uncharacterized MFS-type transporter YcaD [ycaD]. 1 382 36.03 T 28-03-2018 IPR023745 MSF-type transporter, YcaD AM393_RS19940 7c7f0b152f1056b8cc14dc50abf982e5 382 Gene3D G3DSA:1.20.1250.20 189 376 1.1E-18 T 28-03-2018 AM393_RS19940 7c7f0b152f1056b8cc14dc50abf982e5 382 Gene3D G3DSA:1.20.1250.20 2 188 1.9E-21 T 28-03-2018 AM393_RS13450 b24bbe99647f690ba4210845b1b63c96 420 Pfam PF00589 Phage integrase family 224 384 1.6E-15 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM393_RS13450 b24bbe99647f690ba4210845b1b63c96 420 Gene3D G3DSA:1.10.150.130 88 202 3.4E-19 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal AM393_RS13450 b24bbe99647f690ba4210845b1b63c96 420 Pfam PF13356 Arm DNA-binding domain 3 89 4.5E-20 T 28-03-2018 IPR025166 Integrase, DNA-binding domain AM393_RS13450 b24bbe99647f690ba4210845b1b63c96 420 Gene3D G3DSA:1.10.443.10 203 395 5.7E-19 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM393_RS13450 b24bbe99647f690ba4210845b1b63c96 420 SUPERFAMILY SSF56349 99 389 2.35E-48 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AM393_RS02845 7ff533f14a84557e3a6acf2bba608f93 219 Pfam PF09335 SNARE associated Golgi protein 49 177 3.1E-26 T 28-03-2018 IPR032816 SNARE associated Golgi protein AM393_RS15250 58ea02f3130f0185b021fbe50b5fd813 426 SUPERFAMILY SSF53383 2 425 4.13E-139 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM393_RS15250 58ea02f3130f0185b021fbe50b5fd813 426 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 3 425 1.3E-205 T 28-03-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 AM393_RS15250 58ea02f3130f0185b021fbe50b5fd813 426 Gene3D G3DSA:3.90.1150.10 1 181 3.1E-38 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM393_RS15250 58ea02f3130f0185b021fbe50b5fd813 426 Gene3D G3DSA:3.90.1150.10 310 426 5.5E-19 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM393_RS15250 58ea02f3130f0185b021fbe50b5fd813 426 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 234 270 - T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM393_RS15250 58ea02f3130f0185b021fbe50b5fd813 426 Gene3D G3DSA:3.40.640.10 182 309 5.6E-47 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM393_RS15250 58ea02f3130f0185b021fbe50b5fd813 426 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 3 426 108.17 T 28-03-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 AM393_RS15250 58ea02f3130f0185b021fbe50b5fd813 426 Pfam PF00202 Aminotransferase class-III 32 396 6.7E-80 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM393_RS14605 a7aa18e13a83e0bd2a5639b8e2c4e38e 329 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 3 325 36.287 T 28-03-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 AM393_RS14605 a7aa18e13a83e0bd2a5639b8e2c4e38e 329 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 6 324 1.9E-130 T 28-03-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 AM393_RS14605 a7aa18e13a83e0bd2a5639b8e2c4e38e 329 SUPERFAMILY SSF53659 5 327 3.2E-118 T 28-03-2018 AM393_RS14605 a7aa18e13a83e0bd2a5639b8e2c4e38e 329 Gene3D G3DSA:3.40.718.10 2 329 2.3E-133 T 28-03-2018 AM393_RS14605 a7aa18e13a83e0bd2a5639b8e2c4e38e 329 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 34 321 2.7E-109 T 28-03-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 AM393_RS16425 b85cfaafadcdeee1db4e042000f7e761 109 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 20 92 3.2E-19 T 28-03-2018 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 AM393_RS16425 b85cfaafadcdeee1db4e042000f7e761 109 TIGRFAM TIGR02847 CyoD: cytochrome o ubiquinol oxidase subunit IV 12 107 8.3E-39 T 28-03-2018 IPR014210 Cytochrome o ubiquinol oxidase subunit IV GO:0008827|GO:0015990|GO:0016021 AM393_RS02160 1cd14331b73b6848b48d6efada848ba0 506 Pfam PF00005 ABC transporter 29 178 1.5E-28 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS02160 1cd14331b73b6848b48d6efada848ba0 506 Pfam PF00005 ABC transporter 280 434 2.3E-17 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS02160 1cd14331b73b6848b48d6efada848ba0 506 Gene3D G3DSA:3.40.50.300 264 502 5.6E-32 T 28-03-2018 AM393_RS02160 1cd14331b73b6848b48d6efada848ba0 506 ProSitePatterns PS00211 ABC transporters family signature. 407 421 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS02160 1cd14331b73b6848b48d6efada848ba0 506 SMART SM00382 38 233 1.7E-8 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS02160 1cd14331b73b6848b48d6efada848ba0 506 SMART SM00382 288 483 0.73 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS02160 1cd14331b73b6848b48d6efada848ba0 506 Gene3D G3DSA:3.40.50.300 2 240 2.4E-52 T 28-03-2018 AM393_RS02160 1cd14331b73b6848b48d6efada848ba0 506 SUPERFAMILY SSF52540 253 487 2.91E-40 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS02160 1cd14331b73b6848b48d6efada848ba0 506 SUPERFAMILY SSF52540 12 236 2.03E-57 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS07195 b2b12c654af3cbfc175788b54e338965 470 Hamap MF_00675 Uronate isomerase [uxaC]. 2 467 50.447 T 28-03-2018 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 AM393_RS07195 b2b12c654af3cbfc175788b54e338965 470 Gene3D G3DSA:3.20.20.140 90 467 6.8E-157 T 28-03-2018 AM393_RS07195 b2b12c654af3cbfc175788b54e338965 470 Gene3D G3DSA:3.20.20.140 3 89 6.2E-28 T 28-03-2018 AM393_RS07195 b2b12c654af3cbfc175788b54e338965 470 Pfam PF02614 Glucuronate isomerase 1 465 3.2E-230 T 28-03-2018 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 AM393_RS07195 b2b12c654af3cbfc175788b54e338965 470 SUPERFAMILY SSF51556 3 465 3.33E-184 T 28-03-2018 IPR032466 Metal-dependent hydrolase AM393_RS20725 5db0d57e90498ef383edb22ce93555c1 194 Gene3D G3DSA:3.90.950.10 2 194 3.2E-62 T 28-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AM393_RS20725 5db0d57e90498ef383edb22ce93555c1 194 Hamap MF_00528 Septum formation protein Maf [maf]. 3 191 31.251 T 28-03-2018 IPR003697 Maf-like protein GO:0047429 AM393_RS20725 5db0d57e90498ef383edb22ce93555c1 194 Pfam PF02545 Maf-like protein 4 186 9.4E-49 T 28-03-2018 IPR003697 Maf-like protein GO:0047429 AM393_RS20725 5db0d57e90498ef383edb22ce93555c1 194 SUPERFAMILY SSF52972 3 185 3.2E-62 T 28-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AM393_RS20725 5db0d57e90498ef383edb22ce93555c1 194 TIGRFAM TIGR00172 maf: septum formation protein Maf 2 185 9.3E-70 T 28-03-2018 IPR003697 Maf-like protein GO:0047429 AM393_RS20725 5db0d57e90498ef383edb22ce93555c1 194 PIRSF PIRSF006305 1 192 3.3E-46 T 28-03-2018 IPR003697 Maf-like protein GO:0047429 AM393_RS26245 27ae6ce525524039eb33bc69c66705ba 440 Gene3D G3DSA:1.20.1250.20 16 219 4.3E-39 T 28-03-2018 AM393_RS26245 27ae6ce525524039eb33bc69c66705ba 440 Pfam PF07690 Major Facilitator Superfamily 31 395 2.4E-56 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS26245 27ae6ce525524039eb33bc69c66705ba 440 Gene3D G3DSA:1.20.1250.20 237 440 1.2E-22 T 28-03-2018 AM393_RS26245 27ae6ce525524039eb33bc69c66705ba 440 SUPERFAMILY SSF103473 13 437 1.1E-80 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS26380 d82212e541176800bdd77b3e72fc6739 343 SUPERFAMILY SSF51726 7 341 5.23E-68 T 28-03-2018 AM393_RS26380 d82212e541176800bdd77b3e72fc6739 343 PIRSF PIRSF005632 1 343 2.2E-193 T 28-03-2018 IPR016456 Predicted cobalamin-independent methionine synthase, catalytic subunit AM393_RS26380 d82212e541176800bdd77b3e72fc6739 343 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 5 330 1.7E-39 T 28-03-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 AM393_RS26380 d82212e541176800bdd77b3e72fc6739 343 Gene3D G3DSA:3.20.20.210 1 343 6.4E-87 T 28-03-2018 AM393_RS08515 b277fe91ab6cf3a234f7779a6808568a 457 Gene3D G3DSA:3.40.1010.10 215 340 2.0E-35 T 28-03-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AM393_RS08515 b277fe91ab6cf3a234f7779a6808568a 457 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 216 448 3.1E-90 T 28-03-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AM393_RS08515 b277fe91ab6cf3a234f7779a6808568a 457 Gene3D G3DSA:3.40.50.720 3 120 2.6E-18 T 28-03-2018 AM393_RS08515 b277fe91ab6cf3a234f7779a6808568a 457 Gene3D G3DSA:3.30.950.10 341 457 2.4E-37 T 28-03-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AM393_RS08515 b277fe91ab6cf3a234f7779a6808568a 457 Pfam PF10414 Sirohaem synthase dimerisation region 150 208 3.3E-18 T 28-03-2018 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AM393_RS08515 b277fe91ab6cf3a234f7779a6808568a 457 SUPERFAMILY SSF53790 215 456 1.83E-77 T 28-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AM393_RS08515 b277fe91ab6cf3a234f7779a6808568a 457 Gene3D G3DSA:3.30.160.110 121 148 1.2E-16 T 28-03-2018 AM393_RS08515 b277fe91ab6cf3a234f7779a6808568a 457 Hamap MF_01646 Siroheme synthase [cysG]. 1 457 50.788 T 28-03-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AM393_RS08515 b277fe91ab6cf3a234f7779a6808568a 457 Gene3D G3DSA:1.10.8.210 151 209 1.0E-18 T 28-03-2018 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AM393_RS08515 b277fe91ab6cf3a234f7779a6808568a 457 PIRSF PIRSF036426 1 457 4.4E-202 T 28-03-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AM393_RS08515 b277fe91ab6cf3a234f7779a6808568a 457 SUPERFAMILY SSF51735 2 112 7.55E-28 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS08515 b277fe91ab6cf3a234f7779a6808568a 457 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 221 235 - T 28-03-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AM393_RS08515 b277fe91ab6cf3a234f7779a6808568a 457 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 205 7.3E-69 T 28-03-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AM393_RS08515 b277fe91ab6cf3a234f7779a6808568a 457 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 296 329 - T 28-03-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AM393_RS08515 b277fe91ab6cf3a234f7779a6808568a 457 Pfam PF13241 Putative NAD(P)-binding 6 115 3.9E-26 T 28-03-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AM393_RS08515 b277fe91ab6cf3a234f7779a6808568a 457 SUPERFAMILY SSF75615 114 201 4.97E-26 T 28-03-2018 AM393_RS08515 b277fe91ab6cf3a234f7779a6808568a 457 Pfam PF14824 Sirohaem biosynthesis protein central 119 145 8.9E-9 T 28-03-2018 IPR028281 Siroheme synthase, central domain KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AM393_RS08515 b277fe91ab6cf3a234f7779a6808568a 457 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 218 426 2.3E-48 T 28-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AM393_RS03700 ad1736bdd1d4a21b7bc044b423db4f16 396 SUPERFAMILY SSF46458 1 142 2.33E-38 T 28-03-2018 IPR009050 Globin-like AM393_RS03700 ad1736bdd1d4a21b7bc044b423db4f16 396 Gene3D G3DSA:2.40.30.10 158 254 2.8E-25 T 28-03-2018 AM393_RS03700 ad1736bdd1d4a21b7bc044b423db4f16 396 PRINTS PR00410 Phenol hydroxylase reductase family signature 263 282 7.5E-8 T 28-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AM393_RS03700 ad1736bdd1d4a21b7bc044b423db4f16 396 PRINTS PR00410 Phenol hydroxylase reductase family signature 358 366 7.5E-8 T 28-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AM393_RS03700 ad1736bdd1d4a21b7bc044b423db4f16 396 PRINTS PR00410 Phenol hydroxylase reductase family signature 247 256 7.5E-8 T 28-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AM393_RS03700 ad1736bdd1d4a21b7bc044b423db4f16 396 PRINTS PR00410 Phenol hydroxylase reductase family signature 183 195 7.5E-8 T 28-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AM393_RS03700 ad1736bdd1d4a21b7bc044b423db4f16 396 Pfam PF00042 Globin 7 102 1.4E-14 T 28-03-2018 IPR000971 Globin GO:0020037 AM393_RS03700 ad1736bdd1d4a21b7bc044b423db4f16 396 Gene3D G3DSA:3.40.50.80 255 396 1.9E-23 T 28-03-2018 AM393_RS03700 ad1736bdd1d4a21b7bc044b423db4f16 396 SUPERFAMILY SSF63380 148 253 3.57E-28 T 28-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AM393_RS03700 ad1736bdd1d4a21b7bc044b423db4f16 396 Pfam PF00175 Oxidoreductase NAD-binding domain 264 372 6.1E-17 T 28-03-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AM393_RS03700 ad1736bdd1d4a21b7bc044b423db4f16 396 Hamap MF_01252 Flavohemoprotein [hmp]. 1 396 56.53 T 28-03-2018 IPR023950 Flavohemoprotein GO:0008941|GO:0019825|GO:0020037|GO:0051409|GO:0055114|GO:0071949 AM393_RS03700 ad1736bdd1d4a21b7bc044b423db4f16 396 Pfam PF00970 Oxidoreductase FAD-binding domain 156 252 1.5E-8 T 28-03-2018 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 AM393_RS03700 ad1736bdd1d4a21b7bc044b423db4f16 396 SUPERFAMILY SSF52343 256 394 1.18E-36 T 28-03-2018 AM393_RS03700 ad1736bdd1d4a21b7bc044b423db4f16 396 Gene3D G3DSA:1.10.490.10 1 157 5.7E-40 T 28-03-2018 AM393_RS07670 6cb250b07953cecd52c6f566b538e3b4 181 Pfam PF03968 OstA-like protein 37 149 7.8E-33 T 28-03-2018 IPR005653 Organic solvent tolerance-like, N-terminal AM393_RS07670 6cb250b07953cecd52c6f566b538e3b4 181 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 27 166 1.2E-51 T 28-03-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 AM393_RS07670 6cb250b07953cecd52c6f566b538e3b4 181 Gene3D G3DSA:2.60.450.10 27 164 6.0E-30 T 28-03-2018 AM393_RS07670 6cb250b07953cecd52c6f566b538e3b4 181 Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. 7 167 27.258 T 28-03-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 AM393_RS21030 05768dd1148c64df1c6bc3091fa16462 295 Gene3D G3DSA:1.20.1260.10 1 200 6.9E-64 T 28-03-2018 IPR012347 Ferritin-related AM393_RS21030 05768dd1148c64df1c6bc3091fa16462 295 SUPERFAMILY SSF47240 1 285 3.5E-83 T 28-03-2018 IPR009078 Ferritin-like superfamily AM393_RS21030 05768dd1148c64df1c6bc3091fa16462 295 Pfam PF05067 Manganese containing catalase 1 288 1.9E-92 T 28-03-2018 IPR007760 Manganese catalase AM393_RS03195 0bd90cc17b6c44822e34fab2824d9aae 191 Pfam PF06572 Protein of unknown function (DUF1131) 24 191 2.9E-81 T 28-03-2018 IPR010938 Protein of unknown function DUF1131 AM393_RS03195 0bd90cc17b6c44822e34fab2824d9aae 191 Gene3D G3DSA:2.60.460.10 31 190 1.5E-66 T 28-03-2018 AM393_RS03195 0bd90cc17b6c44822e34fab2824d9aae 191 ProDom PD105195 LIPOPROTEIN YFEY MEMBRANE OUTER PRECURSOR SIGNAL ESCHERICHIA ECS3303 EXPORTED Y1456 1 191 2.0E-85 T 28-03-2018 IPR010938 Protein of unknown function DUF1131 AM393_RS09860 daf859426b122e1690fdc22619001acb 283 Gene3D G3DSA:1.20.1080.10 1 259 4.7E-78 T 28-03-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 AM393_RS09860 daf859426b122e1690fdc22619001acb 283 SUPERFAMILY SSF81338 9 257 2.62E-78 T 28-03-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 AM393_RS09860 daf859426b122e1690fdc22619001acb 283 PRINTS PR00783 Major intrinsic protein family signature 85 104 5.0E-51 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AM393_RS09860 daf859426b122e1690fdc22619001acb 283 PRINTS PR00783 Major intrinsic protein family signature 151 169 5.0E-51 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AM393_RS09860 daf859426b122e1690fdc22619001acb 283 PRINTS PR00783 Major intrinsic protein family signature 48 72 5.0E-51 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AM393_RS09860 daf859426b122e1690fdc22619001acb 283 PRINTS PR00783 Major intrinsic protein family signature 9 28 5.0E-51 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AM393_RS09860 daf859426b122e1690fdc22619001acb 283 PRINTS PR00783 Major intrinsic protein family signature 184 206 5.0E-51 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AM393_RS09860 daf859426b122e1690fdc22619001acb 283 PRINTS PR00783 Major intrinsic protein family signature 234 254 5.0E-51 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AM393_RS09860 daf859426b122e1690fdc22619001acb 283 TIGRFAM TIGR00861 MIP: MIP family channel proteins 13 251 2.5E-72 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AM393_RS09860 daf859426b122e1690fdc22619001acb 283 ProSitePatterns PS00221 MIP family signature. 66 74 - T 28-03-2018 IPR022357 Major intrinsic protein, conserved site GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AM393_RS09860 daf859426b122e1690fdc22619001acb 283 Pfam PF00230 Major intrinsic protein 2 251 6.3E-72 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AM393_RS06065 ee0372d8f73ee0fbd7168e5925d38c37 176 Pfam PF07883 Cupin domain 83 150 7.0E-11 T 28-03-2018 IPR013096 Cupin 2, conserved barrel AM393_RS06065 ee0372d8f73ee0fbd7168e5925d38c37 176 SUPERFAMILY SSF51182 46 170 7.17E-22 T 28-03-2018 IPR011051 RmlC-like cupin domain AM393_RS06065 ee0372d8f73ee0fbd7168e5925d38c37 176 Gene3D G3DSA:2.60.120.10 39 176 1.4E-16 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AM393_RS15900 10b6a149fa30f89608f5026a2f495dff 294 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 124 280 2.9E-7 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS15900 10b6a149fa30f89608f5026a2f495dff 294 SUPERFAMILY SSF161098 83 272 3.11E-23 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS15900 10b6a149fa30f89608f5026a2f495dff 294 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 30 281 1.1E-78 T 28-03-2018 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 AM393_RS15900 10b6a149fa30f89608f5026a2f495dff 294 Gene3D G3DSA:1.10.3720.10 27 282 1.1E-19 T 28-03-2018 AM393_RS17065 c689ce683205c0d05b00073ab4b5d521 229 Pfam PF06323 Phage antitermination protein Q 4 220 6.4E-82 T 28-03-2018 IPR010455 Bacteriophage 82, GpQ AM393_RS17065 c689ce683205c0d05b00073ab4b5d521 229 SUPERFAMILY SSF53686 83 211 6.12E-5 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AM393_RS17065 c689ce683205c0d05b00073ab4b5d521 229 PIRSF PIRSF004417 1 229 3.6E-90 T 28-03-2018 IPR010455 Bacteriophage 82, GpQ AM393_RS17065 c689ce683205c0d05b00073ab4b5d521 229 ProDom PD038144 ANTITERMINATOR Q PROPHAGE TRANSCRIPTION ANTITERMINATION CP-933P GIFSY-1 ENCODED BY Q-LIKE 1 218 3.0E-77 T 28-03-2018 IPR010455 Bacteriophage 82, GpQ AM393_RS15780 3841090ba115be628d65fa09efc1ff61 339 SUPERFAMILY SSF52922 202 337 3.27E-39 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AM393_RS15780 3841090ba115be628d65fa09efc1ff61 339 SUPERFAMILY SSF52518 2 217 7.36E-65 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold AM393_RS15780 3841090ba115be628d65fa09efc1ff61 339 Gene3D G3DSA:3.40.50.970 2 207 6.4E-67 T 28-03-2018 AM393_RS15780 3841090ba115be628d65fa09efc1ff61 339 Gene3D G3DSA:3.40.50.920 208 338 3.1E-35 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AM393_RS15780 3841090ba115be628d65fa09efc1ff61 339 SMART SM00861 4 193 1.2E-63 T 28-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AM393_RS15780 3841090ba115be628d65fa09efc1ff61 339 Pfam PF02779 Transketolase, pyrimidine binding domain 5 192 3.4E-58 T 28-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AM393_RS15780 3841090ba115be628d65fa09efc1ff61 339 Pfam PF02780 Transketolase, C-terminal domain 207 329 1.3E-38 T 28-03-2018 IPR033248 Transketolase, C-terminal domain AM393_RS23505 c7122aa1ffa68c78a45df68286d0346d 399 Hamap MF_00517 Probable sugar efflux transporter [sotB]. 1 390 29.29 T 28-03-2018 IPR023495 Sugar efflux transporter, putative AM393_RS23505 c7122aa1ffa68c78a45df68286d0346d 399 SUPERFAMILY SSF103473 5 387 1.96E-57 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS23505 c7122aa1ffa68c78a45df68286d0346d 399 Gene3D G3DSA:1.20.1250.20 2 198 6.3E-28 T 28-03-2018 AM393_RS23505 c7122aa1ffa68c78a45df68286d0346d 399 Gene3D G3DSA:1.20.1250.20 199 398 2.4E-18 T 28-03-2018 AM393_RS23505 c7122aa1ffa68c78a45df68286d0346d 399 Pfam PF07690 Major Facilitator Superfamily 18 323 1.2E-33 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS26155 ec72c9b375fe0119e9a75b918e7b1902 361 Gene3D G3DSA:3.20.20.30 1 360 3.9E-74 T 28-03-2018 AM393_RS26155 ec72c9b375fe0119e9a75b918e7b1902 361 SUPERFAMILY SSF51679 12 352 9.42E-79 T 28-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AM393_RS26155 ec72c9b375fe0119e9a75b918e7b1902 361 Pfam PF00296 Luciferase-like monooxygenase 11 323 4.6E-73 T 28-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AM393_RS10585 e854404215f5278a53229fb2df67ca15 501 Pfam PF00005 ABC transporter 268 423 6.0E-25 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS10585 e854404215f5278a53229fb2df67ca15 501 Pfam PF00005 ABC transporter 22 169 3.1E-28 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS10585 e854404215f5278a53229fb2df67ca15 501 ProSitePatterns PS00211 ABC transporters family signature. 396 410 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS10585 e854404215f5278a53229fb2df67ca15 501 SUPERFAMILY SSF52540 4 228 1.7E-53 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS10585 e854404215f5278a53229fb2df67ca15 501 Gene3D G3DSA:3.40.50.300 1 252 3.9E-49 T 28-03-2018 AM393_RS10585 e854404215f5278a53229fb2df67ca15 501 Gene3D G3DSA:3.40.50.300 265 496 1.5E-41 T 28-03-2018 AM393_RS10585 e854404215f5278a53229fb2df67ca15 501 SUPERFAMILY SSF52540 257 482 4.89E-49 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS10585 e854404215f5278a53229fb2df67ca15 501 SMART SM00382 277 472 2.9E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS10585 e854404215f5278a53229fb2df67ca15 501 SMART SM00382 29 219 2.3E-6 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS21225 f2ab30eb77f6c875734ebf6dc3079de6 160 Pfam PF00255 Glutathione peroxidase 4 111 1.1E-41 T 28-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AM393_RS21225 f2ab30eb77f6c875734ebf6dc3079de6 160 SUPERFAMILY SSF52833 2 158 1.03E-62 T 28-03-2018 IPR012336 Thioredoxin-like fold AM393_RS21225 f2ab30eb77f6c875734ebf6dc3079de6 160 ProSitePatterns PS00763 Glutathione peroxidases signature 2. 60 67 - T 28-03-2018 IPR029760 Glutathione peroxidase conserved site Reactome: R-HSA-3299685 AM393_RS21225 f2ab30eb77f6c875734ebf6dc3079de6 160 PIRSF PIRSF000303 1 160 7.7E-66 T 28-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AM393_RS21225 f2ab30eb77f6c875734ebf6dc3079de6 160 PRINTS PR01011 Glutathione peroxidase family signature 122 131 2.6E-21 T 28-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AM393_RS21225 f2ab30eb77f6c875734ebf6dc3079de6 160 PRINTS PR01011 Glutathione peroxidase family signature 22 39 2.6E-21 T 28-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AM393_RS21225 f2ab30eb77f6c875734ebf6dc3079de6 160 PRINTS PR01011 Glutathione peroxidase family signature 57 73 2.6E-21 T 28-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AM393_RS21225 f2ab30eb77f6c875734ebf6dc3079de6 160 ProSitePatterns PS00460 Glutathione peroxidases active site. 24 39 - T 28-03-2018 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 AM393_RS21225 f2ab30eb77f6c875734ebf6dc3079de6 160 Gene3D G3DSA:3.40.30.10 2 160 6.3E-48 T 28-03-2018 AM393_RS26065 8e91274600659049214d02881817c25e 144 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 12 124 1.6E-14 T 28-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AM393_RS26065 8e91274600659049214d02881817c25e 144 SUPERFAMILY SSF54593 12 130 3.71E-22 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM393_RS26065 8e91274600659049214d02881817c25e 144 Gene3D G3DSA:3.10.180.10 2 138 1.1E-21 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM393_RS06900 759e9becf329378f34f41f2187b95746 567 SUPERFAMILY SSF51338 2 177 6.48E-63 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM393_RS06900 759e9becf329378f34f41f2187b95746 567 Gene3D G3DSA:3.20.20.140 143 421 1.5E-163 T 28-03-2018 AM393_RS06900 759e9becf329378f34f41f2187b95746 567 Gene3D G3DSA:3.20.20.140 422 553 7.1E-44 T 28-03-2018 AM393_RS06900 759e9becf329378f34f41f2187b95746 567 ProSitePatterns PS01120 Urease nickel ligands signature. 127 140 - T 28-03-2018 IPR029754 Urease nickel binding site GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AM393_RS06900 759e9becf329378f34f41f2187b95746 567 Pfam PF00449 Urease alpha-subunit, N-terminal domain 3 119 3.9E-56 T 28-03-2018 IPR011612 Urease alpha-subunit, N-terminal domain KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AM393_RS06900 759e9becf329378f34f41f2187b95746 567 Gene3D G3DSA:2.30.40.10 65 142 1.1E-17 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM393_RS06900 759e9becf329378f34f41f2187b95746 567 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 334 350 3.3E-34 T 28-03-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AM393_RS06900 759e9becf329378f34f41f2187b95746 567 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 427 440 3.3E-34 T 28-03-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AM393_RS06900 759e9becf329378f34f41f2187b95746 567 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 401 416 3.3E-34 T 28-03-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AM393_RS06900 759e9becf329378f34f41f2187b95746 567 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 295 312 3.3E-34 T 28-03-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AM393_RS06900 759e9becf329378f34f41f2187b95746 567 ProSitePatterns PS00145 Urease active site. 317 333 - T 28-03-2018 IPR017950 Urease active site GO:0009039 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AM393_RS06900 759e9becf329378f34f41f2187b95746 567 Hamap MF_01953 Urease subunit alpha [ureC]. 2 567 56.83 T 28-03-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AM393_RS06900 759e9becf329378f34f41f2187b95746 567 TIGRFAM TIGR01792 urease_alph: urease, alpha subunit 4 567 7.0E-293 T 28-03-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AM393_RS06900 759e9becf329378f34f41f2187b95746 567 Pfam PF01979 Amidohydrolase family 125 453 2.2E-84 T 28-03-2018 IPR006680 Amidohydrolase-related GO:0016787 AM393_RS06900 759e9becf329378f34f41f2187b95746 567 SUPERFAMILY SSF51338 422 477 5.06E-7 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM393_RS06900 759e9becf329378f34f41f2187b95746 567 SUPERFAMILY SSF51556 130 431 5.76E-198 T 28-03-2018 IPR032466 Metal-dependent hydrolase AM393_RS06900 759e9becf329378f34f41f2187b95746 567 SUPERFAMILY SSF51556 480 567 5.76E-198 T 28-03-2018 IPR032466 Metal-dependent hydrolase AM393_RS23580 33eeb9c52641900df14b396e2b0ec50e 308 SUPERFAMILY SSF56601 5 308 2.25E-113 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AM393_RS23580 33eeb9c52641900df14b396e2b0ec50e 308 Pfam PF04960 Glutaminase 24 308 3.1E-112 T 28-03-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 AM393_RS23580 33eeb9c52641900df14b396e2b0ec50e 308 TIGRFAM TIGR03814 Gln_ase: glutaminase A 10 308 1.4E-128 T 28-03-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 AM393_RS23580 33eeb9c52641900df14b396e2b0ec50e 308 Gene3D G3DSA:3.40.710.10 4 308 5.8E-122 T 28-03-2018 AM393_RS23580 33eeb9c52641900df14b396e2b0ec50e 308 Hamap MF_00313 Glutaminase [glsA]. 6 308 46.6 T 28-03-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 AM393_RS06235 f917bf16ddd4eb049a5515bf96fdb7f8 352 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 194 210 - T 28-03-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 AM393_RS06235 f917bf16ddd4eb049a5515bf96fdb7f8 352 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 38 169 4.5E-22 T 28-03-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 AM393_RS06235 f917bf16ddd4eb049a5515bf96fdb7f8 352 Gene3D G3DSA:1.10.340.30 23 119 4.9E-33 T 28-03-2018 AM393_RS06235 f917bf16ddd4eb049a5515bf96fdb7f8 352 Gene3D G3DSA:1.10.1670.10 120 225 1.6E-35 T 28-03-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 AM393_RS06235 f917bf16ddd4eb049a5515bf96fdb7f8 352 ProSitePatterns PS01155 Endonuclease III family signature. 104 133 - T 28-03-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 AM393_RS06235 f917bf16ddd4eb049a5515bf96fdb7f8 352 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 194 210 7.2E-5 T 28-03-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 AM393_RS06235 f917bf16ddd4eb049a5515bf96fdb7f8 352 Pfam PF00633 Helix-hairpin-helix motif 102 129 1.1E-8 T 28-03-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 AM393_RS06235 f917bf16ddd4eb049a5515bf96fdb7f8 352 Pfam PF14815 NUDIX domain 236 345 2.2E-24 T 28-03-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 AM393_RS06235 f917bf16ddd4eb049a5515bf96fdb7f8 352 SUPERFAMILY SSF55811 222 346 5.53E-27 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 AM393_RS06235 f917bf16ddd4eb049a5515bf96fdb7f8 352 SUPERFAMILY SSF48150 7 227 3.93E-79 T 28-03-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 AM393_RS06235 f917bf16ddd4eb049a5515bf96fdb7f8 352 SMART SM00478 41 192 2.2E-54 T 28-03-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 AM393_RS06235 f917bf16ddd4eb049a5515bf96fdb7f8 352 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 7 279 8.6E-130 T 28-03-2018 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 AM393_RS06235 f917bf16ddd4eb049a5515bf96fdb7f8 352 SMART SM00525 193 213 8.3E-5 T 28-03-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 AM393_RS06235 f917bf16ddd4eb049a5515bf96fdb7f8 352 Gene3D G3DSA:3.90.79.10 226 351 1.7E-10 T 28-03-2018 AM393_RS21890 154cf291de6cb5b567263ad76d1086da 513 SMART SM00382 226 363 2.9E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS21890 154cf291de6cb5b567263ad76d1086da 513 Gene3D G3DSA:1.10.10.60 451 508 4.6E-8 T 28-03-2018 AM393_RS21890 154cf291de6cb5b567263ad76d1086da 513 SUPERFAMILY SSF55021 2 69 7.63E-5 T 28-03-2018 AM393_RS21890 154cf291de6cb5b567263ad76d1086da 513 Gene3D G3DSA:3.30.70.260 1 81 1.5E-8 T 28-03-2018 AM393_RS21890 154cf291de6cb5b567263ad76d1086da 513 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 285 300 - T 28-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AM393_RS21890 154cf291de6cb5b567263ad76d1086da 513 Gene3D G3DSA:1.10.8.60 372 442 9.6E-18 T 28-03-2018 AM393_RS21890 154cf291de6cb5b567263ad76d1086da 513 TIGRFAM TIGR04381 HTH_TypR: TyrR family helix-turn-helix domain 460 507 2.6E-28 T 28-03-2018 IPR030828 TyrR family, helix-turn-helix domain GO:0003677 AM393_RS21890 154cf291de6cb5b567263ad76d1086da 513 SUPERFAMILY SSF52540 209 440 2.02E-57 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS21890 154cf291de6cb5b567263ad76d1086da 513 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 230 243 - T 28-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AM393_RS21890 154cf291de6cb5b567263ad76d1086da 513 Gene3D G3DSA:3.30.450.20 82 185 3.2E-12 T 28-03-2018 AM393_RS21890 154cf291de6cb5b567263ad76d1086da 513 SUPERFAMILY SSF55785 83 173 1.64E-7 T 28-03-2018 IPR000014 PAS domain AM393_RS21890 154cf291de6cb5b567263ad76d1086da 513 SMART SM00091 80 146 9.4E-8 T 28-03-2018 IPR000014 PAS domain AM393_RS21890 154cf291de6cb5b567263ad76d1086da 513 Pfam PF00158 Sigma-54 interaction domain 210 365 1.4E-52 T 28-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AM393_RS21890 154cf291de6cb5b567263ad76d1086da 513 Gene3D G3DSA:3.40.50.300 202 371 1.5E-22 T 28-03-2018 AM393_RS21890 154cf291de6cb5b567263ad76d1086da 513 SUPERFAMILY SSF46689 454 507 7.17E-10 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS21890 154cf291de6cb5b567263ad76d1086da 513 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 412 421 - T 28-03-2018 IPR025944 Sigma-54 interaction domain, conserved site AM393_RS24555 b910cd289c8eaff5cf4a9d997f392c27 761 Gene3D G3DSA:3.30.830.10 2 222 1.8E-45 T 28-03-2018 AM393_RS24555 b910cd289c8eaff5cf4a9d997f392c27 761 SUPERFAMILY SSF63411 5 211 4.07E-30 T 28-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AM393_RS24555 b910cd289c8eaff5cf4a9d997f392c27 761 Gene3D G3DSA:3.30.830.10 597 759 2.3E-11 T 28-03-2018 AM393_RS24555 b910cd289c8eaff5cf4a9d997f392c27 761 TIGRFAM TIGR02110 PQQ_syn_pqqF: coenzyme PQQ biosynthesis protein PqqF 6 682 7.5E-287 T 28-03-2018 IPR011844 Coenzyme PQQ biosynthesis protein PqqF GO:0004222|GO:0006508|GO:0008270|GO:0018189 AM393_RS24555 b910cd289c8eaff5cf4a9d997f392c27 761 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 36 59 - T 28-03-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 AM393_RS24555 b910cd289c8eaff5cf4a9d997f392c27 761 Pfam PF00675 Insulinase (Peptidase family M16) 17 153 2.0E-36 T 28-03-2018 IPR011765 Peptidase M16, N-terminal AM393_RS24555 b910cd289c8eaff5cf4a9d997f392c27 761 SUPERFAMILY SSF63411 591 756 1.35E-17 T 28-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AM393_RS23300 4fe2d690d79f45616da41740c9dc0802 130 SUPERFAMILY SSF54427 10 109 6.0E-8 T 28-03-2018 IPR032710 NTF2-like domain AM393_RS23300 4fe2d690d79f45616da41740c9dc0802 130 Gene3D G3DSA:3.10.450.50 7 116 1.3E-7 T 28-03-2018 AM393_RS12960 d0d1f9841bb590a24dcb66d4a8d32d56 220 Pfam PF01814 Hemerythrin HHE cation binding domain 77 216 4.8E-27 T 28-03-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 AM393_RS12960 d0d1f9841bb590a24dcb66d4a8d32d56 220 Gene3D G3DSA:1.20.120.520 61 217 2.9E-31 T 28-03-2018 AM393_RS12960 d0d1f9841bb590a24dcb66d4a8d32d56 220 Hamap MF_01606 Iron-sulfur cluster repair protein YtfE [ytfE]. 1 220 51.607 T 28-03-2018 IPR023742 Iron-sulfur cluster repair protein YftE GO:0006950|GO:0030091 AM393_RS12960 d0d1f9841bb590a24dcb66d4a8d32d56 220 TIGRFAM TIGR03652 FeS_repair_RIC: iron-sulfur cluster repair di-iron protein 8 216 3.6E-80 T 28-03-2018 IPR019903 Repair of iron centres family AM393_RS12960 d0d1f9841bb590a24dcb66d4a8d32d56 220 Gene3D G3DSA:1.10.3910.10 4 60 6.0E-11 T 28-03-2018 AM393_RS12960 d0d1f9841bb590a24dcb66d4a8d32d56 220 Pfam PF04405 Domain of Unknown function (DUF542) 5 58 1.9E-19 T 28-03-2018 IPR019903 Repair of iron centres family AM393_RS14300 83336a467b976d0dbaa7a0e2d2ac920b 157 Pfam PF05981 CreA protein 24 155 1.5E-59 T 28-03-2018 IPR010292 Uncharacterised protein family CreA AM393_RS14300 83336a467b976d0dbaa7a0e2d2ac920b 157 PIRSF PIRSF003174 1 157 8.2E-70 T 28-03-2018 IPR010292 Uncharacterised protein family CreA AM393_RS03145 187fede3ad3d5d648c8feedab6c96576 288 TIGRFAM TIGR00687 pyridox_kin: pyridoxal kinase 22 279 1.6E-51 T 28-03-2018 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-6798695|Reactome: R-HSA-964975 AM393_RS03145 187fede3ad3d5d648c8feedab6c96576 288 Gene3D G3DSA:3.40.1190.20 17 279 3.4E-47 T 28-03-2018 IPR029056 Ribokinase-like AM393_RS03145 187fede3ad3d5d648c8feedab6c96576 288 SUPERFAMILY SSF53613 23 284 7.02E-60 T 28-03-2018 IPR029056 Ribokinase-like AM393_RS03145 187fede3ad3d5d648c8feedab6c96576 288 Pfam PF08543 Phosphomethylpyrimidine kinase 94 269 2.6E-22 T 28-03-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 AM393_RS08550 ee43b72394a4ff89ec599110b9ef5fa1 173 SUPERFAMILY SSF52540 4 170 1.37E-34 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS08550 ee43b72394a4ff89ec599110b9ef5fa1 173 PRINTS PR01100 Shikimate kinase family signature 59 67 3.8E-29 T 28-03-2018 AM393_RS08550 ee43b72394a4ff89ec599110b9ef5fa1 173 PRINTS PR01100 Shikimate kinase family signature 98 115 3.8E-29 T 28-03-2018 AM393_RS08550 ee43b72394a4ff89ec599110b9ef5fa1 173 PRINTS PR01100 Shikimate kinase family signature 7 22 3.8E-29 T 28-03-2018 AM393_RS08550 ee43b72394a4ff89ec599110b9ef5fa1 173 PRINTS PR01100 Shikimate kinase family signature 31 44 3.8E-29 T 28-03-2018 AM393_RS08550 ee43b72394a4ff89ec599110b9ef5fa1 173 PRINTS PR01100 Shikimate kinase family signature 77 86 3.8E-29 T 28-03-2018 AM393_RS08550 ee43b72394a4ff89ec599110b9ef5fa1 173 Gene3D G3DSA:3.40.50.300 1 173 7.5E-37 T 28-03-2018 AM393_RS08550 ee43b72394a4ff89ec599110b9ef5fa1 173 ProSitePatterns PS01128 Shikimate kinase signature. 60 85 - T 28-03-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 AM393_RS08550 ee43b72394a4ff89ec599110b9ef5fa1 173 Hamap MF_00109 Shikimate kinase [aroK]. 4 171 29.335 T 28-03-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 AM393_RS08550 ee43b72394a4ff89ec599110b9ef5fa1 173 Pfam PF01202 Shikimate kinase 13 170 4.6E-56 T 28-03-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 AM393_RS03270 eacba4277ba94817ad0241212534f466 95 ProDom PD012510 UTILIZATION ETHANOLAMINE CARBOXYSOME CCML PEPTIDE EUTN/CARBOXYSOME STRUCTURAL EUTN A B 11 83 4.0E-30 T 28-03-2018 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml AM393_RS03270 eacba4277ba94817ad0241212534f466 95 Gene3D G3DSA:2.40.50.220 2 95 3.4E-31 T 28-03-2018 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml AM393_RS03270 eacba4277ba94817ad0241212534f466 95 Pfam PF03319 Ethanolamine utilisation protein EutN/carboxysome 1 83 1.8E-28 T 28-03-2018 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml AM393_RS03270 eacba4277ba94817ad0241212534f466 95 SUPERFAMILY SSF159133 1 94 4.05E-30 T 28-03-2018 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml AM393_RS02345 0647bffc0e87b290ac07f9a27c169bed 428 Pfam PF00144 Beta-lactamase 111 411 2.8E-37 T 28-03-2018 IPR001466 Beta-lactamase-related AM393_RS02345 0647bffc0e87b290ac07f9a27c169bed 428 Gene3D G3DSA:3.40.710.10 97 423 1.3E-48 T 28-03-2018 AM393_RS02345 0647bffc0e87b290ac07f9a27c169bed 428 SUPERFAMILY SSF56601 8 21 3.56E-74 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AM393_RS02345 0647bffc0e87b290ac07f9a27c169bed 428 SUPERFAMILY SSF56601 49 410 3.56E-74 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AM393_RS22070 0297b74a804dd7e21144be5caf8fca85 552 Gene3D G3DSA:3.40.50.300 1 169 3.6E-20 T 28-03-2018 AM393_RS22070 0297b74a804dd7e21144be5caf8fca85 552 SMART SM00490 249 329 6.4E-6 T 28-03-2018 IPR001650 Helicase, C-terminal AM393_RS22070 0297b74a804dd7e21144be5caf8fca85 552 SUPERFAMILY SSF52540 204 332 5.36E-39 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS22070 0297b74a804dd7e21144be5caf8fca85 552 SUPERFAMILY SSF52540 22 155 5.36E-39 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS22070 0297b74a804dd7e21144be5caf8fca85 552 SMART SM00487 2 185 9.3E-16 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AM393_RS22070 0297b74a804dd7e21144be5caf8fca85 552 Gene3D G3DSA:3.40.50.300 211 358 8.6E-16 T 28-03-2018 AM393_RS22070 0297b74a804dd7e21144be5caf8fca85 552 Pfam PF00271 Helicase conserved C-terminal domain 238 327 1.6E-7 T 28-03-2018 IPR001650 Helicase, C-terminal AM393_RS22070 0297b74a804dd7e21144be5caf8fca85 552 Pfam PF04851 Type III restriction enzyme, res subunit 10 153 2.2E-14 T 28-03-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 AM393_RS20930 641642bd8567fd0b34cb2e5f51997dfd 410 Pfam PF01546 Peptidase family M20/M25/M40 139 402 4.3E-17 T 28-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 AM393_RS20930 641642bd8567fd0b34cb2e5f51997dfd 410 SUPERFAMILY SSF53187 322 403 1.68E-83 T 28-03-2018 AM393_RS20930 641642bd8567fd0b34cb2e5f51997dfd 410 SUPERFAMILY SSF53187 1 209 1.68E-83 T 28-03-2018 AM393_RS20930 641642bd8567fd0b34cb2e5f51997dfd 410 Hamap MF_00550 Peptidase T [pepT]. 1 404 56.002 T 28-03-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 AM393_RS20930 641642bd8567fd0b34cb2e5f51997dfd 410 TIGRFAM TIGR01882 peptidase-T: peptidase T 2 407 2.2E-158 T 28-03-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 AM393_RS20930 641642bd8567fd0b34cb2e5f51997dfd 410 Gene3D G3DSA:3.40.630.10 1 410 6.2E-49 T 28-03-2018 AM393_RS20930 641642bd8567fd0b34cb2e5f51997dfd 410 Pfam PF07687 Peptidase dimerisation domain 206 302 8.0E-12 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain AM393_RS20930 641642bd8567fd0b34cb2e5f51997dfd 410 PIRSF PIRSF037215 1 408 2.2E-183 T 28-03-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 AM393_RS20930 641642bd8567fd0b34cb2e5f51997dfd 410 SUPERFAMILY SSF55031 208 320 8.9E-45 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain AM393_RS20930 641642bd8567fd0b34cb2e5f51997dfd 410 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 73 82 - T 28-03-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 AM393_RS20930 641642bd8567fd0b34cb2e5f51997dfd 410 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 138 176 - T 28-03-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 AM393_RS08270 17619cacd8795734f1e7bcc936a920d2 104 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 3 103 1.3E-39 T 28-03-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS08270 17619cacd8795734f1e7bcc936a920d2 104 SUPERFAMILY SSF50104 4 100 3.19E-33 T 28-03-2018 IPR008991 Translation protein SH3-like domain AM393_RS08270 17619cacd8795734f1e7bcc936a920d2 104 Pfam PF00467 KOW motif 8 37 7.7E-5 T 28-03-2018 IPR005824 KOW AM393_RS08270 17619cacd8795734f1e7bcc936a920d2 104 Gene3D G3DSA:2.30.30.30 2 93 2.9E-30 T 28-03-2018 IPR014722 Ribosomal protein L2 domain 2 AM393_RS08270 17619cacd8795734f1e7bcc936a920d2 104 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 3 97 20.157 T 28-03-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS08270 17619cacd8795734f1e7bcc936a920d2 104 ProSitePatterns PS01108 Ribosomal protein L24 signature. 8 25 - T 28-03-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM393_RS08270 17619cacd8795734f1e7bcc936a920d2 104 SMART SM00739 4 31 9.8E-4 T 28-03-2018 IPR005824 KOW AM393_RS08270 17619cacd8795734f1e7bcc936a920d2 104 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 39 103 1.6E-23 T 28-03-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS29075 11a14165b9f48e49cb97408b9e6b17f1 271 SUPERFAMILY SSF51717 3 266 2.22E-72 T 28-03-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM393_RS29075 11a14165b9f48e49cb97408b9e6b17f1 271 Gene3D G3DSA:3.20.20.20 1 271 1.8E-78 T 28-03-2018 AM393_RS29075 11a14165b9f48e49cb97408b9e6b17f1 271 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 7 22 - T 28-03-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM393_RS29075 11a14165b9f48e49cb97408b9e6b17f1 271 Pfam PF00809 Pterin binding enzyme 8 249 3.6E-71 T 28-03-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM393_RS29075 11a14165b9f48e49cb97408b9e6b17f1 271 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 41 54 - T 28-03-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM393_RS29075 11a14165b9f48e49cb97408b9e6b17f1 271 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 7 263 7.8E-75 T 28-03-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 AM393_RS21175 61be20df0c9b21f88277df28ce72f866 80 Pfam PF06183 DinI-like family 17 77 5.3E-22 T 28-03-2018 IPR010391 DNA damage-inducible protein DinI-like AM393_RS21175 61be20df0c9b21f88277df28ce72f866 80 Gene3D G3DSA:3.30.910.10 1 77 1.0E-26 T 28-03-2018 IPR010391 DNA damage-inducible protein DinI-like AM393_RS21175 61be20df0c9b21f88277df28ce72f866 80 SUPERFAMILY SSF54857 1 79 6.41E-25 T 28-03-2018 IPR010391 DNA damage-inducible protein DinI-like AM393_RS23575 0c7fb6f4c14558fae68ad8ab3311bf5c 461 Pfam PF00171 Aldehyde dehydrogenase family 8 456 1.2E-139 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AM393_RS23575 0c7fb6f4c14558fae68ad8ab3311bf5c 461 Gene3D G3DSA:3.40.309.10 251 442 9.0E-65 T 28-03-2018 AM393_RS23575 0c7fb6f4c14558fae68ad8ab3311bf5c 461 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 260 271 - T 28-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 AM393_RS23575 0c7fb6f4c14558fae68ad8ab3311bf5c 461 SUPERFAMILY SSF53720 8 459 3.4E-140 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AM393_RS23575 0c7fb6f4c14558fae68ad8ab3311bf5c 461 Gene3D G3DSA:3.40.605.10 2 250 1.4E-73 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AM393_RS00150 efd0c33a10905e4df94fcfe03917de58 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 5.9E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS00150 efd0c33a10905e4df94fcfe03917de58 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 5.9E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS00150 efd0c33a10905e4df94fcfe03917de58 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 5.9E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS00150 efd0c33a10905e4df94fcfe03917de58 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 14 65 1.1E-13 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS00150 efd0c33a10905e4df94fcfe03917de58 297 Gene3D G3DSA:3.40.190.10 88 182 0.0039 T 28-03-2018 AM393_RS00150 efd0c33a10905e4df94fcfe03917de58 297 Gene3D G3DSA:1.10.10.10 1 86 1.4E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS00150 efd0c33a10905e4df94fcfe03917de58 297 Pfam PF03466 LysR substrate binding domain 93 292 1.4E-17 T 28-03-2018 IPR005119 LysR, substrate-binding AM393_RS00150 efd0c33a10905e4df94fcfe03917de58 297 SUPERFAMILY SSF46785 6 91 6.53E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS00150 efd0c33a10905e4df94fcfe03917de58 297 Gene3D G3DSA:3.40.190.10 183 265 1.5E-6 T 28-03-2018 AM393_RS00150 efd0c33a10905e4df94fcfe03917de58 297 SUPERFAMILY SSF53850 93 292 2.71E-17 T 28-03-2018 AM393_RS07520 76d374ff5022095f06b1b1e061d2c044 183 Pfam PF07437 YfaZ precursor 8 183 9.8E-58 T 28-03-2018 IPR009998 YfaZ AM393_RS07520 76d374ff5022095f06b1b1e061d2c044 183 SUPERFAMILY SSF56925 59 183 4.71E-11 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AM393_RS07520 76d374ff5022095f06b1b1e061d2c044 183 Gene3D G3DSA:2.40.160.20 19 183 1.8E-9 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AM393_RS14055 53db76a2035593b4b5b2bc1f4fb39576 353 Pfam PF01380 SIS domain 39 163 7.2E-13 T 28-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AM393_RS14055 53db76a2035593b4b5b2bc1f4fb39576 353 SUPERFAMILY SSF53697 5 342 4.92E-49 T 28-03-2018 AM393_RS14055 53db76a2035593b4b5b2bc1f4fb39576 353 Gene3D G3DSA:3.40.50.10490 201 340 2.9E-15 T 28-03-2018 AM393_RS14055 53db76a2035593b4b5b2bc1f4fb39576 353 Gene3D G3DSA:3.40.50.10490 1 200 5.9E-34 T 28-03-2018 AM393_RS16020 983432ebc888d99d574ec5251df72c60 310 Pfam PF02574 Homocysteine S-methyltransferase 17 308 2.3E-81 T 28-03-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 AM393_RS16020 983432ebc888d99d574ec5251df72c60 310 SUPERFAMILY SSF82282 6 308 4.97E-85 T 28-03-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 AM393_RS16020 983432ebc888d99d574ec5251df72c60 310 Gene3D G3DSA:3.20.20.330 1 309 1.7E-104 T 28-03-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 AM393_RS16020 983432ebc888d99d574ec5251df72c60 310 PIRSF PIRSF037505 269 309 19.0 T 28-03-2018 IPR017226 Betaine-homocysteine S-methyltransferase, BHMT GO:0005737|GO:0008270|GO:0009086|GO:0047150 Reactome: R-HSA-1614635 AM393_RS16020 983432ebc888d99d574ec5251df72c60 310 PIRSF PIRSF037505 8 178 3.3E-6 T 28-03-2018 IPR017226 Betaine-homocysteine S-methyltransferase, BHMT GO:0005737|GO:0008270|GO:0009086|GO:0047150 Reactome: R-HSA-1614635 AM393_RS19770 64ff70f20fbf79a102f8f223ea08662d 379 SMART SM00267 210 379 3.9E-66 T 28-03-2018 IPR000160 GGDEF domain AM393_RS19770 64ff70f20fbf79a102f8f223ea08662d 379 Pfam PF17178 Membrane-associated sensor 30 219 5.3E-64 T 28-03-2018 IPR033444 Membrane-associated sensor MASE5 AM393_RS19770 64ff70f20fbf79a102f8f223ea08662d 379 Pfam PF00990 Diguanylate cyclase, GGDEF domain 221 376 2.2E-50 T 28-03-2018 IPR000160 GGDEF domain AM393_RS19770 64ff70f20fbf79a102f8f223ea08662d 379 SUPERFAMILY SSF55073 226 378 4.32E-48 T 28-03-2018 IPR029787 Nucleotide cyclase AM393_RS19770 64ff70f20fbf79a102f8f223ea08662d 379 Gene3D G3DSA:3.30.70.270 203 379 7.6E-56 T 28-03-2018 AM393_RS19770 64ff70f20fbf79a102f8f223ea08662d 379 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 217 377 3.3E-48 T 28-03-2018 IPR000160 GGDEF domain AM393_RS13815 cd31bae2fe9be3d8b964b9f2e45663b5 413 Gene3D G3DSA:1.20.1250.20 207 403 4.8E-10 T 28-03-2018 AM393_RS13815 cd31bae2fe9be3d8b964b9f2e45663b5 413 ProSitePatterns PS00216 Sugar transport proteins signature 1. 72 89 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM393_RS13815 cd31bae2fe9be3d8b964b9f2e45663b5 413 SUPERFAMILY SSF103473 19 405 2.22E-48 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS13815 cd31bae2fe9be3d8b964b9f2e45663b5 413 Pfam PF07690 Major Facilitator Superfamily 27 355 5.3E-32 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS13815 cd31bae2fe9be3d8b964b9f2e45663b5 413 Gene3D G3DSA:1.20.1250.20 5 201 6.1E-29 T 28-03-2018 AM393_RS01710 f623314a4f716202707c98da7d38b418 246 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS01710 f623314a4f716202707c98da7d38b418 246 SUPERFAMILY SSF52540 42 239 4.44E-45 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS01710 f623314a4f716202707c98da7d38b418 246 Gene3D G3DSA:3.40.50.300 1 245 2.9E-47 T 28-03-2018 AM393_RS01710 f623314a4f716202707c98da7d38b418 246 Pfam PF00005 ABC transporter 47 177 2.3E-16 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS01710 f623314a4f716202707c98da7d38b418 246 SMART SM00382 55 244 2.0E-8 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS08740 b4b5d6f3cb40a0fede2c20e1dd32bf72 431 Gene3D G3DSA:3.90.550.10 20 333 1.2E-66 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM393_RS08740 b4b5d6f3cb40a0fede2c20e1dd32bf72 431 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 113 121 - T 28-03-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 AM393_RS08740 b4b5d6f3cb40a0fede2c20e1dd32bf72 431 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 21 397 3.0E-156 T 28-03-2018 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 AM393_RS08740 b4b5d6f3cb40a0fede2c20e1dd32bf72 431 Pfam PF00483 Nucleotidyl transferase 22 291 6.6E-70 T 28-03-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 AM393_RS08740 b4b5d6f3cb40a0fede2c20e1dd32bf72 431 SUPERFAMILY SSF53448 378 393 1.62E-78 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM393_RS08740 b4b5d6f3cb40a0fede2c20e1dd32bf72 431 SUPERFAMILY SSF53448 20 294 1.62E-78 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM393_RS08740 b4b5d6f3cb40a0fede2c20e1dd32bf72 431 SUPERFAMILY SSF51161 312 411 5.68E-19 T 28-03-2018 IPR011004 Trimeric LpxA-like AM393_RS08740 b4b5d6f3cb40a0fede2c20e1dd32bf72 431 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 26 45 - T 28-03-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 AM393_RS08740 b4b5d6f3cb40a0fede2c20e1dd32bf72 431 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 17 423 52.587 T 28-03-2018 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 AM393_RS08740 b4b5d6f3cb40a0fede2c20e1dd32bf72 431 Gene3D G3DSA:2.160.10.10 334 420 4.7E-7 T 28-03-2018 AM393_RS27275 46fd46d40b44face94c1138185231493 141 SUPERFAMILY SSF51306 13 135 1.29E-31 T 28-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AM393_RS27275 46fd46d40b44face94c1138185231493 141 Pfam PF00717 Peptidase S24-like 58 118 2.4E-12 T 28-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AM393_RS27275 46fd46d40b44face94c1138185231493 141 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 91 103 1.2E-8 T 28-03-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 AM393_RS27275 46fd46d40b44face94c1138185231493 141 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 52 62 1.2E-8 T 28-03-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 AM393_RS27275 46fd46d40b44face94c1138185231493 141 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 63 74 1.2E-8 T 28-03-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 AM393_RS27275 46fd46d40b44face94c1138185231493 141 Gene3D G3DSA:2.10.109.10 25 139 1.6E-22 T 28-03-2018 AM393_RS06125 ce544bbbc562fd6a19a734a537f97ddf 658 TIGRFAM TIGR01273 speA: arginine decarboxylase 31 656 7.9E-277 T 28-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AM393_RS06125 ce544bbbc562fd6a19a734a537f97ddf 658 SUPERFAMILY SSF51419 92 369 2.43E-67 T 28-03-2018 IPR029066 PLP-binding barrel AM393_RS06125 ce544bbbc562fd6a19a734a537f97ddf 658 Gene3D G3DSA:2.40.37.10 22 114 1.2E-13 T 28-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AM393_RS06125 ce544bbbc562fd6a19a734a537f97ddf 658 Gene3D G3DSA:2.40.37.10 422 604 1.1E-62 T 28-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AM393_RS06125 ce544bbbc562fd6a19a734a537f97ddf 658 PRINTS PR01180 Arginine decarboxylase signature 170 185 1.3E-73 T 28-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AM393_RS06125 ce544bbbc562fd6a19a734a537f97ddf 658 PRINTS PR01180 Arginine decarboxylase signature 347 364 1.3E-73 T 28-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AM393_RS06125 ce544bbbc562fd6a19a734a537f97ddf 658 PRINTS PR01180 Arginine decarboxylase signature 220 242 1.3E-73 T 28-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AM393_RS06125 ce544bbbc562fd6a19a734a537f97ddf 658 PRINTS PR01180 Arginine decarboxylase signature 116 130 1.3E-73 T 28-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AM393_RS06125 ce544bbbc562fd6a19a734a537f97ddf 658 PRINTS PR01180 Arginine decarboxylase signature 566 587 1.3E-73 T 28-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AM393_RS06125 ce544bbbc562fd6a19a734a537f97ddf 658 PRINTS PR01180 Arginine decarboxylase signature 196 217 1.3E-73 T 28-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AM393_RS06125 ce544bbbc562fd6a19a734a537f97ddf 658 PRINTS PR01180 Arginine decarboxylase signature 488 509 1.3E-73 T 28-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AM393_RS06125 ce544bbbc562fd6a19a734a537f97ddf 658 PRINTS PR01180 Arginine decarboxylase signature 92 107 1.3E-73 T 28-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AM393_RS06125 ce544bbbc562fd6a19a734a537f97ddf 658 PRINTS PR01180 Arginine decarboxylase signature 513 538 1.3E-73 T 28-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AM393_RS06125 ce544bbbc562fd6a19a734a537f97ddf 658 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 301 314 - T 28-03-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site AM393_RS06125 ce544bbbc562fd6a19a734a537f97ddf 658 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 263 276 8.0E-19 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AM393_RS06125 ce544bbbc562fd6a19a734a537f97ddf 658 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 566 579 8.0E-19 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AM393_RS06125 ce544bbbc562fd6a19a734a537f97ddf 658 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 124 142 8.0E-19 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AM393_RS06125 ce544bbbc562fd6a19a734a537f97ddf 658 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 146 158 8.0E-19 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AM393_RS06125 ce544bbbc562fd6a19a734a537f97ddf 658 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 357 376 8.0E-19 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AM393_RS06125 ce544bbbc562fd6a19a734a537f97ddf 658 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 124 142 - T 28-03-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site AM393_RS06125 ce544bbbc562fd6a19a734a537f97ddf 658 Gene3D G3DSA:3.20.20.10 115 369 9.3E-34 T 28-03-2018 IPR029066 PLP-binding barrel AM393_RS06125 ce544bbbc562fd6a19a734a537f97ddf 658 PIRSF PIRSF001336 17 658 2.6E-255 T 28-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AM393_RS06125 ce544bbbc562fd6a19a734a537f97ddf 658 Hamap MF_01417 Biosynthetic arginine decarboxylase [speA]. 28 657 43.248 T 28-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AM393_RS06125 ce544bbbc562fd6a19a734a537f97ddf 658 SUPERFAMILY SSF50621 481 584 7.67E-8 T 28-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AM393_RS06125 ce544bbbc562fd6a19a734a537f97ddf 658 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 100 367 2.0E-71 T 28-03-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 AM393_RS26210 655405ac7299020b363232b7be9e1a78 554 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 166 181 2.0E-37 T 28-03-2018 AM393_RS26210 655405ac7299020b363232b7be9e1a78 554 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 287 302 2.0E-37 T 28-03-2018 AM393_RS26210 655405ac7299020b363232b7be9e1a78 554 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 320 338 2.0E-37 T 28-03-2018 AM393_RS26210 655405ac7299020b363232b7be9e1a78 554 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 302 318 2.0E-37 T 28-03-2018 AM393_RS26210 655405ac7299020b363232b7be9e1a78 554 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 338 354 2.0E-37 T 28-03-2018 AM393_RS26210 655405ac7299020b363232b7be9e1a78 554 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 17 39 2.0E-37 T 28-03-2018 AM393_RS26210 655405ac7299020b363232b7be9e1a78 554 SUPERFAMILY SSF51905 17 187 3.13E-69 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS26210 655405ac7299020b363232b7be9e1a78 554 SUPERFAMILY SSF51905 274 388 3.13E-69 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS26210 655405ac7299020b363232b7be9e1a78 554 Pfam PF01494 FAD binding domain 16 352 7.3E-84 T 28-03-2018 IPR002938 FAD-binding domain GO:0071949 AM393_RS26210 655405ac7299020b363232b7be9e1a78 554 Gene3D G3DSA:3.50.50.60 14 357 1.1E-55 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS26210 655405ac7299020b363232b7be9e1a78 554 Hamap MF_01652 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase [mhpA]. 7 554 65.225 T 28-03-2018 IPR023786 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase GO:0008688|GO:0019622|GO:0055114 KEGG: 00360+1.14.13.127|KEGG: 00362+1.14.13.12|KEGG: 00627+1.14.13.12|MetaCyc: PWY-6690 AM393_RS14885 1bb1f5847742b7f4a8dceb7269c89af8 167 ProDom PD089227 MONITOR PERIPLASMIC SECRETION PRECURSOR SIGNAL YACA 3 167 4.0E-53 T 28-03-2018 IPR009502 Secretion monitor GO:0045182 AM393_RS14885 1bb1f5847742b7f4a8dceb7269c89af8 167 Hamap MF_01332 Secretion monitor [secM]. 3 167 37.788 T 28-03-2018 IPR009502 Secretion monitor GO:0045182 AM393_RS14885 1bb1f5847742b7f4a8dceb7269c89af8 167 PIRSF PIRSF004572 3 167 1.4E-74 T 28-03-2018 IPR009502 Secretion monitor GO:0045182 AM393_RS14885 1bb1f5847742b7f4a8dceb7269c89af8 167 Pfam PF06558 Secretion monitor precursor protein (SecM) 26 164 3.1E-52 T 28-03-2018 IPR009502 Secretion monitor GO:0045182 AM393_RS12925 31d649be97cec8fb2641f2884a538488 131 ProSitePatterns PS01048 Ribosomal protein S6 signature. 43 52 - T 28-03-2018 IPR020815 Ribosomal protein S6, conserved site GO:0003735|GO:0005840|GO:0006412|GO:0019843 AM393_RS12925 31d649be97cec8fb2641f2884a538488 131 Pfam PF01250 Ribosomal protein S6 3 91 4.7E-28 T 28-03-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS12925 31d649be97cec8fb2641f2884a538488 131 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 21.662 T 28-03-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 AM393_RS12925 31d649be97cec8fb2641f2884a538488 131 Gene3D G3DSA:3.30.70.60 1 100 1.0E-30 T 28-03-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 AM393_RS12925 31d649be97cec8fb2641f2884a538488 131 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 94 2.6E-38 T 28-03-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS12925 31d649be97cec8fb2641f2884a538488 131 SUPERFAMILY SSF54995 1 103 1.05E-37 T 28-03-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS08470 c9a85cb26714511afa3f69444e16e6b2 406 SUPERFAMILY SSF53383 20 401 4.89E-127 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM393_RS08470 c9a85cb26714511afa3f69444e16e6b2 406 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 17 400 9.0E-152 T 28-03-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 AM393_RS08470 c9a85cb26714511afa3f69444e16e6b2 406 Pfam PF00202 Aminotransferase class-III 26 400 2.5E-139 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM393_RS08470 c9a85cb26714511afa3f69444e16e6b2 406 Gene3D G3DSA:3.40.640.10 60 289 9.6E-77 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM393_RS08470 c9a85cb26714511afa3f69444e16e6b2 406 TIGRFAM TIGR03246 arg_catab_astC: succinylornithine transaminase family 8 404 1.2E-202 T 28-03-2018 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria GO:0006520|GO:0008483|GO:0030170 AM393_RS08470 c9a85cb26714511afa3f69444e16e6b2 406 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 223 260 - T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM393_RS08470 c9a85cb26714511afa3f69444e16e6b2 406 PIRSF PIRSF000521 28 157 2.3E-7 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM393_RS08470 c9a85cb26714511afa3f69444e16e6b2 406 PIRSF PIRSF000521 173 403 1.8E-36 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM393_RS08470 c9a85cb26714511afa3f69444e16e6b2 406 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 14 401 45.653 T 28-03-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 AM393_RS08470 c9a85cb26714511afa3f69444e16e6b2 406 Gene3D G3DSA:3.90.1150.10 290 404 3.4E-29 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM393_RS09620 1b832bd26317c2e84e0bac26f9a7e6ea 310 Hamap MF_01601 ADP-L-glycero-D-manno-heptose-6-epimerase [hldD]. 1 309 49.95 T 28-03-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 AM393_RS09620 1b832bd26317c2e84e0bac26f9a7e6ea 310 SUPERFAMILY SSF51735 1 306 1.55E-62 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS09620 1b832bd26317c2e84e0bac26f9a7e6ea 310 Gene3D G3DSA:3.40.50.720 1 182 3.1E-22 T 28-03-2018 AM393_RS09620 1b832bd26317c2e84e0bac26f9a7e6ea 310 Pfam PF01370 NAD dependent epimerase/dehydratase family 2 236 4.8E-45 T 28-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 AM393_RS09620 1b832bd26317c2e84e0bac26f9a7e6ea 310 TIGRFAM TIGR02197 heptose_epim: ADP-glyceromanno-heptose 6-epimerase 2 308 8.7E-138 T 28-03-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 AM393_RS09620 1b832bd26317c2e84e0bac26f9a7e6ea 310 Gene3D G3DSA:3.90.25.10 183 310 5.5E-19 T 28-03-2018 AM393_RS26325 3dd3b8295b4015aabce6342f38fcf1ba 210 Gene3D G3DSA:1.10.10.60 1 63 3.6E-17 T 28-03-2018 AM393_RS26325 3dd3b8295b4015aabce6342f38fcf1ba 210 Gene3D G3DSA:1.10.357.10 64 208 6.5E-26 T 28-03-2018 AM393_RS26325 3dd3b8295b4015aabce6342f38fcf1ba 210 SUPERFAMILY SSF48498 86 203 1.57E-10 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AM393_RS26325 3dd3b8295b4015aabce6342f38fcf1ba 210 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 20 33 2.1E-10 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM393_RS26325 3dd3b8295b4015aabce6342f38fcf1ba 210 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 40 63 2.1E-10 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM393_RS26325 3dd3b8295b4015aabce6342f38fcf1ba 210 SUPERFAMILY SSF46689 9 90 2.94E-17 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS26325 3dd3b8295b4015aabce6342f38fcf1ba 210 Pfam PF14246 AefR-like transcriptional repressor, C-terminal region 151 205 3.3E-9 T 28-03-2018 AM393_RS26325 3dd3b8295b4015aabce6342f38fcf1ba 210 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 65 8.5E-15 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM393_RS02030 a4cd6b1ac902dd9ddac7c71f00155ad1 239 SMART SM00448 2 112 3.5E-28 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM393_RS02030 a4cd6b1ac902dd9ddac7c71f00155ad1 239 Gene3D G3DSA:2.20.25.10 203 238 8.6E-9 T 28-03-2018 AM393_RS02030 a4cd6b1ac902dd9ddac7c71f00155ad1 239 Gene3D G3DSA:2.40.50.40 136 201 1.3E-6 T 28-03-2018 AM393_RS02030 a4cd6b1ac902dd9ddac7c71f00155ad1 239 SMART SM00850 143 238 2.3E-24 T 28-03-2018 IPR007492 LytTR DNA-binding domain GO:0003677 AM393_RS02030 a4cd6b1ac902dd9ddac7c71f00155ad1 239 Gene3D G3DSA:3.40.50.2300 1 135 7.0E-31 T 28-03-2018 AM393_RS02030 a4cd6b1ac902dd9ddac7c71f00155ad1 239 SUPERFAMILY SSF52172 1 123 1.27E-32 T 28-03-2018 IPR011006 CheY-like superfamily AM393_RS02030 a4cd6b1ac902dd9ddac7c71f00155ad1 239 Pfam PF00072 Response regulator receiver domain 4 112 1.5E-25 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM393_RS02030 a4cd6b1ac902dd9ddac7c71f00155ad1 239 Pfam PF04397 LytTr DNA-binding domain 144 237 1.4E-22 T 28-03-2018 IPR007492 LytTR DNA-binding domain GO:0003677 AM393_RS21500 e1c216034170385a0bc9f61e5df6c09d 252 SUPERFAMILY SSF88713 1 252 3.33E-73 T 28-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AM393_RS21500 e1c216034170385a0bc9f61e5df6c09d 252 Hamap MF_01246 Chitooligosaccharide deacetylase [chbG]. 3 249 38.785 T 28-03-2018 IPR022948 Chitooligosaccharide deacetylase ChbG-like, bacteria GO:0000272|GO:0016811 AM393_RS21500 e1c216034170385a0bc9f61e5df6c09d 252 Gene3D G3DSA:3.20.20.370 1 252 1.3E-77 T 28-03-2018 AM393_RS21500 e1c216034170385a0bc9f61e5df6c09d 252 Pfam PF04794 YdjC-like protein 5 240 2.6E-58 T 28-03-2018 IPR006879 Carbohydrate deacetylase YdjC-like AM393_RS23530 c0bfdc2ccdb8218fce24031ad4c371d5 469 Pfam PF00474 Sodium:solute symporter family 39 380 2.4E-30 T 28-03-2018 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 AM393_RS18130 d21de9ec86ca3f093ec88963ad8905fc 412 Gene3D G3DSA:2.30.40.10 3 60 4.8E-7 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM393_RS18130 d21de9ec86ca3f093ec88963ad8905fc 412 Pfam PF07969 Amidohydrolase family 104 400 5.7E-35 T 28-03-2018 IPR013108 Amidohydrolase 3 AM393_RS18130 d21de9ec86ca3f093ec88963ad8905fc 412 SUPERFAMILY SSF51556 51 371 2.47E-101 T 28-03-2018 IPR032466 Metal-dependent hydrolase AM393_RS18130 d21de9ec86ca3f093ec88963ad8905fc 412 Gene3D G3DSA:3.20.20.140 61 359 1.2E-38 T 28-03-2018 AM393_RS18130 d21de9ec86ca3f093ec88963ad8905fc 412 SUPERFAMILY SSF51338 11 50 1.02E-6 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM393_RS18130 d21de9ec86ca3f093ec88963ad8905fc 412 SUPERFAMILY SSF51338 362 403 1.02E-6 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM393_RS01500 eec63551555b06ff7541ac3336c69ec8 323 SMART SM00267 154 322 5.5E-40 T 28-03-2018 IPR000160 GGDEF domain AM393_RS01500 eec63551555b06ff7541ac3336c69ec8 323 SUPERFAMILY SSF55073 169 318 1.57E-41 T 28-03-2018 IPR029787 Nucleotide cyclase AM393_RS01500 eec63551555b06ff7541ac3336c69ec8 323 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 163 321 2.2E-41 T 28-03-2018 IPR000160 GGDEF domain AM393_RS01500 eec63551555b06ff7541ac3336c69ec8 323 Pfam PF01590 GAF domain 28 155 5.0E-9 T 28-03-2018 IPR003018 GAF domain GO:0005515 AM393_RS01500 eec63551555b06ff7541ac3336c69ec8 323 Gene3D G3DSA:3.30.450.40 25 156 2.3E-19 T 28-03-2018 IPR029016 GAF domain-like AM393_RS01500 eec63551555b06ff7541ac3336c69ec8 323 SUPERFAMILY SSF55781 28 154 2.79E-22 T 28-03-2018 IPR029016 GAF domain-like AM393_RS01500 eec63551555b06ff7541ac3336c69ec8 323 SMART SM00065 26 168 0.0039 T 28-03-2018 IPR003018 GAF domain GO:0005515 AM393_RS01500 eec63551555b06ff7541ac3336c69ec8 323 Gene3D G3DSA:3.30.70.270 157 323 2.0E-46 T 28-03-2018 AM393_RS01500 eec63551555b06ff7541ac3336c69ec8 323 Pfam PF00990 Diguanylate cyclase, GGDEF domain 164 318 3.1E-42 T 28-03-2018 IPR000160 GGDEF domain AM393_RS03580 b27cbf65f6eb0a81292f46a35b9e31cd 258 Pfam PF14581 SseB protein C-terminal domain 137 243 3.0E-29 T 28-03-2018 IPR027945 SseB protein, C-terminal AM393_RS03580 b27cbf65f6eb0a81292f46a35b9e31cd 258 Pfam PF07179 SseB protein N-terminal domain 8 119 4.8E-28 T 28-03-2018 IPR009839 SseB protein N-terminal domain AM393_RS21590 c3f49a12a31038d526b07c697ae2ce8c 315 SUPERFAMILY SSF51735 104 264 2.82E-24 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS21590 c3f49a12a31038d526b07c697ae2ce8c 315 Gene3D G3DSA:3.40.50.720 132 284 5.6E-17 T 28-03-2018 AM393_RS21590 c3f49a12a31038d526b07c697ae2ce8c 315 SMART SM00829 8 287 1.0E-6 T 28-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AM393_RS21590 c3f49a12a31038d526b07c697ae2ce8c 315 SUPERFAMILY SSF50129 1 137 7.75E-21 T 28-03-2018 IPR011032 GroES-like AM393_RS21590 c3f49a12a31038d526b07c697ae2ce8c 315 Gene3D G3DSA:3.90.180.10 1 131 2.0E-21 T 28-03-2018 AM393_RS07965 273ec5a24ca1859e6e2c097818714b76 553 Pfam PF03354 Phage Terminase 71 530 1.3E-89 T 28-03-2018 IPR005021 Terminase large subunit, Lambdalikevirus-type AM393_RS02655 6b584b3ae2604fb1031e173409a7e85f 100 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 8 95 8.2E-21 T 28-03-2018 AM393_RS02655 6b584b3ae2604fb1031e173409a7e85f 100 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 2 100 19.712 T 28-03-2018 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 AM393_RS05175 224dc5bdf6ed46a09e7d1636163bd914 264 SUPERFAMILY SSF53800 2 257 6.8E-80 T 28-03-2018 AM393_RS05175 224dc5bdf6ed46a09e7d1636163bd914 264 Gene3D G3DSA:3.40.50.1400 125 236 4.2E-21 T 28-03-2018 AM393_RS05175 224dc5bdf6ed46a09e7d1636163bd914 264 Gene3D G3DSA:3.40.50.1400 1 124 2.4E-13 T 28-03-2018 AM393_RS05175 224dc5bdf6ed46a09e7d1636163bd914 264 Pfam PF06180 Cobalt chelatase (CbiK) 3 255 2.5E-102 T 28-03-2018 IPR010388 Anaerobic cobalt chelatase GO:0016852|GO:0019251 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 AM393_RS05175 224dc5bdf6ed46a09e7d1636163bd914 264 PIRSF PIRSF033579 1 264 8.7E-106 T 28-03-2018 IPR010388 Anaerobic cobalt chelatase GO:0016852|GO:0019251 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 AM393_RS22785 3df11c27cc4dfe38f17510944f97c19a 488 TIGRFAM TIGR03240 arg_catab_astD: succinylglutamate-semialdehyde dehydrogenase 6 487 1.2E-245 T 28-03-2018 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 AM393_RS22785 3df11c27cc4dfe38f17510944f97c19a 488 Gene3D G3DSA:3.40.605.10 3 261 1.1E-73 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AM393_RS22785 3df11c27cc4dfe38f17510944f97c19a 488 Pfam PF00171 Aldehyde dehydrogenase family 12 460 1.3E-117 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AM393_RS22785 3df11c27cc4dfe38f17510944f97c19a 488 Gene3D G3DSA:3.40.309.10 262 455 9.6E-46 T 28-03-2018 AM393_RS22785 3df11c27cc4dfe38f17510944f97c19a 488 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 273 284 - T 28-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 AM393_RS22785 3df11c27cc4dfe38f17510944f97c19a 488 Hamap MF_01174 N-succinylglutamate 5-semialdehyde dehydrogenase [astD]. 4 488 56.338 T 28-03-2018 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 AM393_RS22785 3df11c27cc4dfe38f17510944f97c19a 488 SUPERFAMILY SSF53720 5 457 1.57E-123 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AM393_RS22785 3df11c27cc4dfe38f17510944f97c19a 488 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 245 252 - T 28-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 AM393_RS19645 b2c80c36ba402705b6663ba14a7ae234 161 PIRSF PIRSF029208 1 154 2.6E-62 T 28-03-2018 IPR016912 Bacteriophage P2, GpU AM393_RS19645 b2c80c36ba402705b6663ba14a7ae234 161 Pfam PF06995 Phage P2 GpU 6 125 4.8E-45 T 28-03-2018 IPR009734 Myoviridae, GpU AM393_RS06340 ce678a6ff3340186a208a9ace9777b90 151 Gene3D G3DSA:2.40.50.140 1 72 5.9E-18 T 28-03-2018 AM393_RS06340 ce678a6ff3340186a208a9ace9777b90 151 SUPERFAMILY SSF50249 2 63 1.25E-13 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM393_RS06340 ce678a6ff3340186a208a9ace9777b90 151 PRINTS PR00050 Cold shock protein signature 3 18 3.4E-5 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM393_RS06340 ce678a6ff3340186a208a9ace9777b90 151 PRINTS PR00050 Cold shock protein signature 36 54 3.4E-5 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM393_RS06340 ce678a6ff3340186a208a9ace9777b90 151 Pfam PF00313 'Cold-shock' DNA-binding domain 1 61 6.6E-12 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM393_RS06340 ce678a6ff3340186a208a9ace9777b90 151 SMART SM00357 2 63 8.4E-10 T 28-03-2018 IPR011129 Cold shock domain GO:0003676 AM393_RS13070 ba24590ce62ded82f204bc6dca6f7b7b 332 SUPERFAMILY SSF56655 2 326 4.45E-113 T 28-03-2018 AM393_RS13070 ba24590ce62ded82f204bc6dca6f7b7b 332 PIRSF PIRSF000904 1 330 3.6E-121 T 28-03-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AM393_RS13070 ba24590ce62ded82f204bc6dca6f7b7b 332 ProSitePatterns PS00124 Fructose-1-6-bisphosphatase active site. 268 280 - T 28-03-2018 IPR020548 Fructose-1,6-bisphosphatase, active site GO:0005975|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AM393_RS13070 ba24590ce62ded82f204bc6dca6f7b7b 332 Gene3D G3DSA:3.40.190.80 198 329 9.0E-58 T 28-03-2018 AM393_RS13070 ba24590ce62ded82f204bc6dca6f7b7b 332 Gene3D G3DSA:3.30.540.10 6 197 4.1E-62 T 28-03-2018 AM393_RS13070 ba24590ce62ded82f204bc6dca6f7b7b 332 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 2 328 41.915 T 28-03-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AM393_RS13070 ba24590ce62ded82f204bc6dca6f7b7b 332 PIRSF PIRSF500210 1 330 6.9E-125 T 28-03-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AM393_RS13070 ba24590ce62ded82f204bc6dca6f7b7b 332 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 177 200 6.3E-71 T 28-03-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AM393_RS13070 ba24590ce62ded82f204bc6dca6f7b7b 332 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 302 327 6.3E-71 T 28-03-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AM393_RS13070 ba24590ce62ded82f204bc6dca6f7b7b 332 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 27 54 6.3E-71 T 28-03-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AM393_RS13070 ba24590ce62ded82f204bc6dca6f7b7b 332 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 64 90 6.3E-71 T 28-03-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AM393_RS13070 ba24590ce62ded82f204bc6dca6f7b7b 332 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 146 169 6.3E-71 T 28-03-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AM393_RS13070 ba24590ce62ded82f204bc6dca6f7b7b 332 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 203 230 6.3E-71 T 28-03-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AM393_RS13070 ba24590ce62ded82f204bc6dca6f7b7b 332 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 3 192 4.4E-83 T 28-03-2018 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AM393_RS01610 57fa2cb8aa754e8edd5562e17d095cf6 389 SUPERFAMILY SSF69189 283 376 4.71E-24 T 28-03-2018 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AM393_RS01610 57fa2cb8aa754e8edd5562e17d095cf6 389 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 30 263 1.4E-96 T 28-03-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 AM393_RS01610 57fa2cb8aa754e8edd5562e17d095cf6 389 Gene3D G3DSA:2.60.410.10 287 374 1.2E-20 T 28-03-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AM393_RS01610 57fa2cb8aa754e8edd5562e17d095cf6 389 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 122 139 1.7E-16 T 28-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AM393_RS01610 57fa2cb8aa754e8edd5562e17d095cf6 389 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 63 74 1.7E-16 T 28-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AM393_RS01610 57fa2cb8aa754e8edd5562e17d095cf6 389 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 149 162 1.7E-16 T 28-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AM393_RS01610 57fa2cb8aa754e8edd5562e17d095cf6 389 Gene3D G3DSA:3.40.710.10 23 286 5.2E-49 T 28-03-2018 AM393_RS01610 57fa2cb8aa754e8edd5562e17d095cf6 389 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 283 374 2.7E-24 T 28-03-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AM393_RS01610 57fa2cb8aa754e8edd5562e17d095cf6 389 SMART SM00936 283 374 3.5E-32 T 28-03-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AM393_RS01610 57fa2cb8aa754e8edd5562e17d095cf6 389 SUPERFAMILY SSF56601 8 283 3.32E-76 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AM393_RS12010 b59e4d2b5efe04628dd41ac99a96f4b4 296 SUPERFAMILY SSF161098 8 296 4.86E-69 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS12010 b59e4d2b5efe04628dd41ac99a96f4b4 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 111 289 1.7E-14 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS12010 b59e4d2b5efe04628dd41ac99a96f4b4 296 Gene3D G3DSA:1.10.3720.10 1 283 2.4E-42 T 28-03-2018 AM393_RS10715 3c9f6b4d5efda594140f4d8c80bd1583 469 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 14 95 3.3E-32 T 28-03-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AM393_RS10715 3c9f6b4d5efda594140f4d8c80bd1583 469 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 259 274 - T 28-03-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 AM393_RS10715 3c9f6b4d5efda594140f4d8c80bd1583 469 SUPERFAMILY SSF55931 102 468 1.67E-138 T 28-03-2018 AM393_RS10715 3c9f6b4d5efda594140f4d8c80bd1583 469 SUPERFAMILY SSF54368 3 99 2.09E-36 T 28-03-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AM393_RS10715 3c9f6b4d5efda594140f4d8c80bd1583 469 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 386 398 - T 28-03-2018 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AM393_RS10715 3c9f6b4d5efda594140f4d8c80bd1583 469 Gene3D G3DSA:3.10.20.70 2 104 1.0E-28 T 28-03-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AM393_RS10715 3c9f6b4d5efda594140f4d8c80bd1583 469 Pfam PF00120 Glutamine synthetase, catalytic domain 103 466 2.7E-138 T 28-03-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AM393_RS10715 3c9f6b4d5efda594140f4d8c80bd1583 469 Gene3D G3DSA:3.30.590.10 105 457 2.9E-123 T 28-03-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 AM393_RS10715 3c9f6b4d5efda594140f4d8c80bd1583 469 SMART SM01230 102 379 2.2E-149 T 28-03-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AM393_RS10715 3c9f6b4d5efda594140f4d8c80bd1583 469 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 4 468 4.6E-218 T 28-03-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AM393_RS10715 3c9f6b4d5efda594140f4d8c80bd1583 469 ProSitePatterns PS00180 Glutamine synthetase signature 1. 50 68 - T 28-03-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 AM393_RS10065 50bee819b61ec56a747b1745c3664069 361 Gene3D G3DSA:3.10.310.10 183 335 1.5E-51 T 28-03-2018 AM393_RS10065 50bee819b61ec56a747b1745c3664069 361 Pfam PF04303 PrpF protein 6 353 1.3E-110 T 28-03-2018 IPR007400 PrpF protein AM393_RS10065 50bee819b61ec56a747b1745c3664069 361 Gene3D G3DSA:3.10.310.10 2 182 5.5E-76 T 28-03-2018 AM393_RS10065 50bee819b61ec56a747b1745c3664069 361 SUPERFAMILY SSF54506 2 169 3.14E-63 T 28-03-2018 AM393_RS10065 50bee819b61ec56a747b1745c3664069 361 SUPERFAMILY SSF54506 173 357 2.35E-56 T 28-03-2018 AM393_RS11450 95c4e8677a0713adcbb7e3bc49d23183 154 Pfam PF03061 Thioesterase superfamily 56 144 3.3E-18 T 28-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AM393_RS11450 95c4e8677a0713adcbb7e3bc49d23183 154 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 24 152 4.8E-14 T 28-03-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 AM393_RS11450 95c4e8677a0713adcbb7e3bc49d23183 154 SUPERFAMILY SSF54637 8 153 2.49E-25 T 28-03-2018 IPR029069 HotDog domain AM393_RS11450 95c4e8677a0713adcbb7e3bc49d23183 154 Gene3D G3DSA:3.10.129.10 6 153 9.0E-29 T 28-03-2018 AM393_RS19865 7685e403ced062aa096db5195bf558e7 72 Gene3D G3DSA:2.40.50.140 1 72 7.1E-36 T 28-03-2018 AM393_RS19865 7685e403ced062aa096db5195bf558e7 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 71 5.1E-39 T 28-03-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 AM393_RS19865 7685e403ced062aa096db5195bf558e7 72 SUPERFAMILY SSF50249 1 70 5.36E-29 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM393_RS19865 7685e403ced062aa096db5195bf558e7 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 9.2E-28 T 28-03-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 AM393_RS19865 7685e403ced062aa096db5195bf558e7 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 27.442 T 28-03-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 AM393_RS19865 7685e403ced062aa096db5195bf558e7 72 SMART SM00316 4 72 2.8E-7 T 28-03-2018 IPR022967 RNA-binding domain, S1 AM393_RS01210 9b6606c830bc97cc6602ea138c9c789f 512 Pfam PF13817 IS66 C-terminal element 468 505 2.5E-16 T 28-03-2018 AM393_RS01210 9b6606c830bc97cc6602ea138c9c789f 512 Pfam PF13007 Transposase C of IS166 homeodomain 39 110 6.7E-12 T 28-03-2018 IPR024463 Transposase TnpC, homeodomain AM393_RS01210 9b6606c830bc97cc6602ea138c9c789f 512 Gene3D G3DSA:1.20.120.330 4 411 2.4E-9 T 28-03-2018 AM393_RS01210 9b6606c830bc97cc6602ea138c9c789f 512 Pfam PF03050 Transposase IS66 family 176 461 3.4E-100 T 28-03-2018 IPR004291 Transposase, IS66 AM393_RS01210 9b6606c830bc97cc6602ea138c9c789f 512 Pfam PF13005 zinc-finger binding domain of transposase IS66 118 161 3.0E-12 T 28-03-2018 IPR024474 Zinc-finger binding domain of transposase IS66 AM393_RS27595 9b6606c830bc97cc6602ea138c9c789f 512 Pfam PF13817 IS66 C-terminal element 468 505 2.5E-16 T 28-03-2018 AM393_RS27595 9b6606c830bc97cc6602ea138c9c789f 512 Pfam PF13007 Transposase C of IS166 homeodomain 39 110 6.7E-12 T 28-03-2018 IPR024463 Transposase TnpC, homeodomain AM393_RS27595 9b6606c830bc97cc6602ea138c9c789f 512 Gene3D G3DSA:1.20.120.330 4 411 2.4E-9 T 28-03-2018 AM393_RS27595 9b6606c830bc97cc6602ea138c9c789f 512 Pfam PF03050 Transposase IS66 family 176 461 3.4E-100 T 28-03-2018 IPR004291 Transposase, IS66 AM393_RS27595 9b6606c830bc97cc6602ea138c9c789f 512 Pfam PF13005 zinc-finger binding domain of transposase IS66 118 161 3.0E-12 T 28-03-2018 IPR024474 Zinc-finger binding domain of transposase IS66 AM393_RS06970 b2f29290ce8b3fdcff6c1dc9e4af5fb4 204 SMART SM00421 141 198 5.2E-12 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS06970 b2f29290ce8b3fdcff6c1dc9e4af5fb4 204 ProSitePatterns PS00622 LuxR-type HTH domain signature. 158 185 - T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS06970 b2f29290ce8b3fdcff6c1dc9e4af5fb4 204 Pfam PF00072 Response regulator receiver domain 4 113 1.8E-27 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM393_RS06970 b2f29290ce8b3fdcff6c1dc9e4af5fb4 204 SUPERFAMILY SSF52172 1 124 7.54E-25 T 28-03-2018 IPR011006 CheY-like superfamily AM393_RS06970 b2f29290ce8b3fdcff6c1dc9e4af5fb4 204 SMART SM00448 1 113 8.1E-25 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM393_RS06970 b2f29290ce8b3fdcff6c1dc9e4af5fb4 204 Pfam PF00196 Bacterial regulatory proteins, luxR family 143 198 9.9E-14 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS06970 b2f29290ce8b3fdcff6c1dc9e4af5fb4 204 Gene3D G3DSA:3.40.50.2300 1 123 2.1E-23 T 28-03-2018 AM393_RS06970 b2f29290ce8b3fdcff6c1dc9e4af5fb4 204 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 144 158 6.7E-7 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS06970 b2f29290ce8b3fdcff6c1dc9e4af5fb4 204 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 158 174 6.7E-7 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS06970 b2f29290ce8b3fdcff6c1dc9e4af5fb4 204 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 174 186 6.7E-7 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS06970 b2f29290ce8b3fdcff6c1dc9e4af5fb4 204 SUPERFAMILY SSF46894 134 202 3.74E-15 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM393_RS06970 b2f29290ce8b3fdcff6c1dc9e4af5fb4 204 Gene3D G3DSA:1.10.10.10 124 204 5.3E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS17960 c2210aa6e4db18ef59200df1cb2525a8 276 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 28 268 1.8E-39 T 28-03-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AM393_RS17960 c2210aa6e4db18ef59200df1cb2525a8 276 Gene3D G3DSA:3.40.50.970 3 276 1.0E-61 T 28-03-2018 AM393_RS17960 c2210aa6e4db18ef59200df1cb2525a8 276 SUPERFAMILY SSF52518 6 273 9.47E-75 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold AM393_RS18530 334e37d99369cc931db982061f7a1c1c 176 Pfam PF00258 Flavodoxin 6 160 8.9E-34 T 28-03-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 AM393_RS18530 334e37d99369cc931db982061f7a1c1c 176 Gene3D G3DSA:3.40.50.360 4 170 3.0E-39 T 28-03-2018 IPR029039 Flavoprotein-like domain AM393_RS18530 334e37d99369cc931db982061f7a1c1c 176 PIRSF PIRSF038996 1 172 9.9E-72 T 28-03-2018 IPR010086 Flavodoxin, long chain GO:0010181 AM393_RS18530 334e37d99369cc931db982061f7a1c1c 176 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 28-03-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 AM393_RS18530 334e37d99369cc931db982061f7a1c1c 176 TIGRFAM TIGR01752 flav_long: flavodoxin 4 168 2.7E-77 T 28-03-2018 IPR010086 Flavodoxin, long chain GO:0010181 AM393_RS18530 334e37d99369cc931db982061f7a1c1c 176 SUPERFAMILY SSF52218 4 169 9.87E-54 T 28-03-2018 IPR029039 Flavoprotein-like domain AM393_RS07425 31114487ade5e36846d02dbc82b6093e 174 SUPERFAMILY SSF55718 43 137 5.42E-21 T 28-03-2018 IPR003033 SCP2 sterol-binding domain AM393_RS07425 31114487ade5e36846d02dbc82b6093e 174 Gene3D G3DSA:3.30.1050.10 23 140 2.9E-16 T 28-03-2018 IPR003033 SCP2 sterol-binding domain AM393_RS07425 31114487ade5e36846d02dbc82b6093e 174 PIRSF PIRSF025550 1 173 7.8E-79 T 28-03-2018 IPR016830 Uncharacterised conserved protein UCP025550, lipid carrier protein, YhbT AM393_RS07425 31114487ade5e36846d02dbc82b6093e 174 Pfam PF02036 SCP-2 sterol transfer family 44 133 1.6E-17 T 28-03-2018 IPR003033 SCP2 sterol-binding domain AM393_RS20585 f55644b09fd9a6c48c8d38b64ae4231c 175 Hamap MF_01205 O-acetyl-ADP-ribose deacetylase [ymdB]. 2 172 52.48 T 28-03-2018 IPR024900 O-acetyl-ADP-ribose deacetylase AM393_RS20585 f55644b09fd9a6c48c8d38b64ae4231c 175 SMART SM00506 4 137 1.1E-49 T 28-03-2018 IPR002589 Macro domain AM393_RS20585 f55644b09fd9a6c48c8d38b64ae4231c 175 SUPERFAMILY SSF52949 6 174 2.02E-66 T 28-03-2018 AM393_RS20585 f55644b09fd9a6c48c8d38b64ae4231c 175 Gene3D G3DSA:3.40.220.10 2 174 1.4E-73 T 28-03-2018 AM393_RS20585 f55644b09fd9a6c48c8d38b64ae4231c 175 Pfam PF01661 Macro domain 21 137 3.7E-43 T 28-03-2018 IPR002589 Macro domain AM393_RS23220 60cf2916e4a39993f230df829be8a5ce 431 Gene3D G3DSA:1.10.3080.10 7 429 1.9E-71 T 28-03-2018 IPR014743 Chloride channel, core GO:0005216|GO:0055085 Reactome: R-HSA-2672351 AM393_RS23220 60cf2916e4a39993f230df829be8a5ce 431 Pfam PF00654 Voltage gated chloride channel 79 415 2.8E-71 T 28-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AM393_RS23220 60cf2916e4a39993f230df829be8a5ce 431 PRINTS PR00762 Chloride channel signature 365 381 1.1E-19 T 28-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AM393_RS23220 60cf2916e4a39993f230df829be8a5ce 431 PRINTS PR00762 Chloride channel signature 166 185 1.1E-19 T 28-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AM393_RS23220 60cf2916e4a39993f230df829be8a5ce 431 PRINTS PR00762 Chloride channel signature 330 350 1.1E-19 T 28-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AM393_RS23220 60cf2916e4a39993f230df829be8a5ce 431 PRINTS PR00762 Chloride channel signature 383 402 1.1E-19 T 28-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AM393_RS23220 60cf2916e4a39993f230df829be8a5ce 431 PRINTS PR00762 Chloride channel signature 116 135 1.1E-19 T 28-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AM393_RS23220 60cf2916e4a39993f230df829be8a5ce 431 SUPERFAMILY SSF81340 7 427 7.85E-86 T 28-03-2018 IPR014743 Chloride channel, core GO:0005216|GO:0055085 Reactome: R-HSA-2672351 AM393_RS07735 ef56a2d1de8ea4417d58bb9084dd779c 310 SUPERFAMILY SSF102114 13 255 1.57E-46 T 28-03-2018 AM393_RS07735 ef56a2d1de8ea4417d58bb9084dd779c 310 TIGRFAM TIGR01212 TIGR01212: radical SAM protein, TIGR01212 family 6 301 3.9E-137 T 28-03-2018 IPR005911 Protein YhcC-like GO:0051536 AM393_RS07735 ef56a2d1de8ea4417d58bb9084dd779c 310 Pfam PF16199 Radical_SAM C-terminal domain 208 283 5.9E-17 T 28-03-2018 IPR032432 Radical SAM, C-terminal extension Reactome: R-HSA-3214847 AM393_RS07735 ef56a2d1de8ea4417d58bb9084dd779c 310 Gene3D G3DSA:3.20.20.70 13 296 1.4E-36 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM393_RS07735 ef56a2d1de8ea4417d58bb9084dd779c 310 Pfam PF04055 Radical SAM superfamily 43 201 2.2E-15 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AM393_RS07735 ef56a2d1de8ea4417d58bb9084dd779c 310 SMART SM00729 23 247 1.6E-40 T 28-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AM393_RS10070 7c416b0099725cc7cff8f122b6409911 237 TIGRFAM TIGR02798 ligK_PcmE: 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase 8 228 6.5E-95 T 28-03-2018 IPR014165 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase KEGG: 00362+4.1.3.17|KEGG: 00660+4.1.3.17|MetaCyc: PWY-7701 AM393_RS10070 7c416b0099725cc7cff8f122b6409911 237 Gene3D G3DSA:3.50.30.40 22 198 7.0E-46 T 28-03-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein AM393_RS10070 7c416b0099725cc7cff8f122b6409911 237 SUPERFAMILY SSF89562 29 189 1.44E-45 T 28-03-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein AM393_RS10070 7c416b0099725cc7cff8f122b6409911 237 Pfam PF03737 Aldolase/RraA 31 178 3.9E-37 T 28-03-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein AM393_RS07725 9c2041b9f0d71b6cadd461d62bbd555d 338 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 130 1.2E-34 T 28-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AM393_RS07725 9c2041b9f0d71b6cadd461d62bbd555d 338 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 58 72 - T 28-03-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 AM393_RS07725 9c2041b9f0d71b6cadd461d62bbd555d 338 SUPERFAMILY SSF50129 1 170 9.59E-54 T 28-03-2018 IPR011032 GroES-like AM393_RS07725 9c2041b9f0d71b6cadd461d62bbd555d 338 SUPERFAMILY SSF51735 139 304 8.57E-23 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS07725 9c2041b9f0d71b6cadd461d62bbd555d 338 Pfam PF00107 Zinc-binding dehydrogenase 171 296 2.9E-17 T 28-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AM393_RS07725 9c2041b9f0d71b6cadd461d62bbd555d 338 Gene3D G3DSA:3.90.180.10 270 338 3.1E-8 T 28-03-2018 AM393_RS07725 9c2041b9f0d71b6cadd461d62bbd555d 338 Gene3D G3DSA:3.90.180.10 1 157 2.1E-50 T 28-03-2018 AM393_RS07725 9c2041b9f0d71b6cadd461d62bbd555d 338 SMART SM00829 10 335 0.0086 T 28-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AM393_RS07725 9c2041b9f0d71b6cadd461d62bbd555d 338 Gene3D G3DSA:3.40.50.720 158 269 2.3E-20 T 28-03-2018 AM393_RS06155 8aa7cba27b7c1cd4e2e0d0b3d8f8401f 166 SMART SM00731 16 165 3.1E-57 T 28-03-2018 IPR006640 SprT-like AM393_RS06155 8aa7cba27b7c1cd4e2e0d0b3d8f8401f 166 Pfam PF10263 SprT-like family 20 117 1.3E-18 T 28-03-2018 IPR006640 SprT-like AM393_RS06155 8aa7cba27b7c1cd4e2e0d0b3d8f8401f 166 Hamap MF_00746 Protein SprT [sprT]. 12 165 40.102 T 28-03-2018 IPR023483 Uncharacterised protein family SprT AM393_RS06155 8aa7cba27b7c1cd4e2e0d0b3d8f8401f 166 Pfam PF17283 SprT-like zinc ribbon domain 126 162 6.0E-9 T 28-03-2018 IPR035240 SprT-like, zinc ribbon domain AM393_RS18320 38bad67bd3d79538c309f3121f391efd 155 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 154 27.125 T 28-03-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AM393_RS18320 38bad67bd3d79538c309f3121f391efd 155 SUPERFAMILY SSF75217 2 153 7.33E-50 T 28-03-2018 IPR029028 Alpha/beta knot methyltransferases AM393_RS18320 38bad67bd3d79538c309f3121f391efd 155 Pfam PF02590 Predicted SPOUT methyltransferase 2 153 5.6E-46 T 28-03-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AM393_RS18320 38bad67bd3d79538c309f3121f391efd 155 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 1 155 3.3E-85 T 28-03-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AM393_RS18320 38bad67bd3d79538c309f3121f391efd 155 PIRSF PIRSF004505 1 154 2.1E-40 T 28-03-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AM393_RS18320 38bad67bd3d79538c309f3121f391efd 155 Gene3D G3DSA:3.40.1280.10 2 154 1.2E-48 T 28-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AM393_RS09890 b9853aded163f644d6290091104f7512 459 Gene3D G3DSA:3.90.1820.10 1 458 6.2E-98 T 28-03-2018 AM393_RS09890 b9853aded163f644d6290091104f7512 459 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 192 436 5.6E-38 T 28-03-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 AM393_RS09890 b9853aded163f644d6290091104f7512 459 SUPERFAMILY SSF56327 166 451 2.24E-46 T 28-03-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 AM393_RS09890 b9853aded163f644d6290091104f7512 459 SUPERFAMILY SSF51735 2 167 4.22E-38 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS09890 b9853aded163f644d6290091104f7512 459 Pfam PF02056 Family 4 glycosyl hydrolase 2 177 2.1E-27 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AM393_RS09890 b9853aded163f644d6290091104f7512 459 PRINTS PR00732 Glycosyl hydrolase family 4 signature 2 17 8.5E-23 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AM393_RS09890 b9853aded163f644d6290091104f7512 459 PRINTS PR00732 Glycosyl hydrolase family 4 signature 162 173 8.5E-23 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AM393_RS09890 b9853aded163f644d6290091104f7512 459 PRINTS PR00732 Glycosyl hydrolase family 4 signature 92 105 8.5E-23 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AM393_RS09890 b9853aded163f644d6290091104f7512 459 PRINTS PR00732 Glycosyl hydrolase family 4 signature 106 126 8.5E-23 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AM393_RS09890 b9853aded163f644d6290091104f7512 459 PRINTS PR00732 Glycosyl hydrolase family 4 signature 188 200 8.5E-23 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AM393_RS09890 b9853aded163f644d6290091104f7512 459 PRINTS PR00732 Glycosyl hydrolase family 4 signature 71 87 8.5E-23 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AM393_RS15755 b4b65ee0f4a9842e200e8a10fb4ce262 263 Gene3D G3DSA:3.20.20.70 1 257 5.8E-49 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM393_RS15755 b4b65ee0f4a9842e200e8a10fb4ce262 263 SMART SM01133 19 233 1.2E-6 T 28-03-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 AM393_RS15755 b4b65ee0f4a9842e200e8a10fb4ce262 263 Pfam PF01791 DeoC/LacD family aldolase 34 232 9.6E-20 T 28-03-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 AM393_RS15755 b4b65ee0f4a9842e200e8a10fb4ce262 263 SUPERFAMILY SSF51569 3 249 1.87E-50 T 28-03-2018 AM393_RS15755 b4b65ee0f4a9842e200e8a10fb4ce262 263 PIRSF PIRSF038992 1 263 1.2E-53 T 28-03-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 AM393_RS20975 0e672c232f578a1249d91564eb29a8a9 152 ProSitePatterns PS00893 Nudix box signature. 36 57 - T 28-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AM393_RS20975 0e672c232f578a1249d91564eb29a8a9 152 SUPERFAMILY SSF55811 2 136 5.96E-30 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 AM393_RS20975 0e672c232f578a1249d91564eb29a8a9 152 PRINTS PR00502 NUDIX hydrolase family signature 31 45 1.9E-5 T 28-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AM393_RS20975 0e672c232f578a1249d91564eb29a8a9 152 PRINTS PR00502 NUDIX hydrolase family signature 45 60 1.9E-5 T 28-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AM393_RS20975 0e672c232f578a1249d91564eb29a8a9 152 Pfam PF00293 NUDIX domain 4 115 6.3E-17 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AM393_RS20975 0e672c232f578a1249d91564eb29a8a9 152 Gene3D G3DSA:3.90.79.10 1 147 9.5E-28 T 28-03-2018 AM393_RS26780 62fa1947237f302d5f7bdf727be311db 393 Pfam PF08376 Nitrate and nitrite sensing 42 277 3.2E-44 T 28-03-2018 IPR013587 Nitrate/nitrite sensing protein AM393_RS26780 62fa1947237f302d5f7bdf727be311db 393 Gene3D G3DSA:1.10.10.10 330 382 1.2E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS26780 62fa1947237f302d5f7bdf727be311db 393 SMART SM01012 326 381 3.6E-21 T 28-03-2018 IPR005561 ANTAR domain GO:0003723 AM393_RS26780 62fa1947237f302d5f7bdf727be311db 393 SUPERFAMILY SSF52172 309 381 1.19E-16 T 28-03-2018 IPR011006 CheY-like superfamily AM393_RS26780 62fa1947237f302d5f7bdf727be311db 393 Pfam PF03861 ANTAR domain 329 381 5.1E-18 T 28-03-2018 IPR005561 ANTAR domain GO:0003723 AM393_RS12655 eb1768d10396c56c6880143c6d8380bf 187 Gene3D G3DSA:2.60.40.1090 26 186 2.2E-19 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM393_RS12655 eb1768d10396c56c6880143c6d8380bf 187 SUPERFAMILY SSF49401 27 185 7.46E-15 T 28-03-2018 IPR008966 Adhesion domain AM393_RS12655 eb1768d10396c56c6880143c6d8380bf 187 Pfam PF00419 Fimbrial protein 32 185 7.8E-9 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM393_RS04495 2723bc744e611c15803cdda4ea895ab3 377 SUPERFAMILY SSF51905 59 313 2.81E-35 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS04495 2723bc744e611c15803cdda4ea895ab3 377 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 5.3E-21 T 28-03-2018 AM393_RS04495 2723bc744e611c15803cdda4ea895ab3 377 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 228 244 5.3E-21 T 28-03-2018 AM393_RS04495 2723bc744e611c15803cdda4ea895ab3 377 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 253 275 5.3E-21 T 28-03-2018 AM393_RS04495 2723bc744e611c15803cdda4ea895ab3 377 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 143 161 5.3E-21 T 28-03-2018 AM393_RS04495 2723bc744e611c15803cdda4ea895ab3 377 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 100 118 5.3E-21 T 28-03-2018 AM393_RS04495 2723bc744e611c15803cdda4ea895ab3 377 Gene3D G3DSA:3.50.50.60 247 320 4.4E-6 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS04495 2723bc744e611c15803cdda4ea895ab3 377 Gene3D G3DSA:3.50.50.60 121 246 1.2E-26 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS04495 2723bc744e611c15803cdda4ea895ab3 377 Gene3D G3DSA:3.50.50.60 3 120 3.7E-8 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS04495 2723bc744e611c15803cdda4ea895ab3 377 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 275 5.5E-52 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS04495 2723bc744e611c15803cdda4ea895ab3 377 Hamap MF_01313 Nitric oxide reductase FlRd-NAD(+) reductase [norW]. 1 377 53.951 T 28-03-2018 IPR023961 Nitric oxide reductase FlRd-NAD(+) reductase GO:0016731|GO:0055114 AM393_RS04495 2723bc744e611c15803cdda4ea895ab3 377 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 268 275 7.7E-14 T 28-03-2018 AM393_RS04495 2723bc744e611c15803cdda4ea895ab3 377 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 229 243 7.7E-14 T 28-03-2018 AM393_RS04495 2723bc744e611c15803cdda4ea895ab3 377 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 143 168 7.7E-14 T 28-03-2018 AM393_RS04495 2723bc744e611c15803cdda4ea895ab3 377 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 7.7E-14 T 28-03-2018 AM393_RS28880 8ab2a7e6da4bcad964189c0fff525fc9 234 SUPERFAMILY SSF53098 75 191 7.59E-7 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM393_RS28880 8ab2a7e6da4bcad964189c0fff525fc9 234 Pfam PF13610 DDE domain 75 212 1.6E-47 T 28-03-2018 IPR032874 DDE domain AM393_RS28880 8ab2a7e6da4bcad964189c0fff525fc9 234 Gene3D G3DSA:1.10.10.10 4 61 5.2E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS28880 8ab2a7e6da4bcad964189c0fff525fc9 234 Gene3D G3DSA:3.30.420.10 72 210 2.9E-12 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM393_RS28780 8ab2a7e6da4bcad964189c0fff525fc9 234 SUPERFAMILY SSF53098 75 191 7.59E-7 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM393_RS28780 8ab2a7e6da4bcad964189c0fff525fc9 234 Pfam PF13610 DDE domain 75 212 1.6E-47 T 28-03-2018 IPR032874 DDE domain AM393_RS28780 8ab2a7e6da4bcad964189c0fff525fc9 234 Gene3D G3DSA:1.10.10.10 4 61 5.2E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS28780 8ab2a7e6da4bcad964189c0fff525fc9 234 Gene3D G3DSA:3.30.420.10 72 210 2.9E-12 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM393_RS28720 8ab2a7e6da4bcad964189c0fff525fc9 234 SUPERFAMILY SSF53098 75 191 7.59E-7 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM393_RS28720 8ab2a7e6da4bcad964189c0fff525fc9 234 Pfam PF13610 DDE domain 75 212 1.6E-47 T 28-03-2018 IPR032874 DDE domain AM393_RS28720 8ab2a7e6da4bcad964189c0fff525fc9 234 Gene3D G3DSA:1.10.10.10 4 61 5.2E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS28720 8ab2a7e6da4bcad964189c0fff525fc9 234 Gene3D G3DSA:3.30.420.10 72 210 2.9E-12 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM393_RS03380 da374bd81995ed943548a422c24e1cad 344 Hamap MF_00924 Outer membrane protein assembly factor BamC [bamC]. 9 343 36.94 T 28-03-2018 IPR014524 Outer membrane protein assembly factor BamC AM393_RS03380 da374bd81995ed943548a422c24e1cad 344 PIRSF PIRSF026343 9 344 3.4E-135 T 28-03-2018 IPR014524 Outer membrane protein assembly factor BamC AM393_RS03380 da374bd81995ed943548a422c24e1cad 344 Pfam PF06804 NlpB/DapX lipoprotein 41 342 7.1E-109 T 28-03-2018 IPR010653 NlpB/DapX lipoprotein AM393_RS03530 bde6949ae99c4a26924cce9acc7a0a37 206 SUPERFAMILY SSF48452 91 191 9.05E-6 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM393_RS03530 bde6949ae99c4a26924cce9acc7a0a37 206 Gene3D G3DSA:1.25.40.10 35 195 9.7E-10 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM393_RS03530 bde6949ae99c4a26924cce9acc7a0a37 206 Pfam PF09976 Tetratricopeptide repeat-like domain 15 205 9.0E-57 T 28-03-2018 IPR018704 Tetratricopeptide repeat-like domain Reactome: R-HSA-192823|Reactome: R-HSA-381038|Reactome: R-HSA-381426|Reactome: R-HSA-6798695|Reactome: R-HSA-8957275 AM393_RS03530 bde6949ae99c4a26924cce9acc7a0a37 206 PIRSF PIRSF006170 2 206 1.4E-57 T 28-03-2018 IPR026039 Uncharacterised protein family UPF0070 AM393_RS12095 c1bedab12308170c49cb204a22888bf5 80 TIGRFAM TIGR02975 phageshock_pspG: phage shock protein G 2 64 1.9E-25 T 28-03-2018 IPR014318 Phage shock protein, PspG AM393_RS12095 c1bedab12308170c49cb204a22888bf5 80 Pfam PF09583 Phage shock protein G (Phageshock_PspG) 1 63 6.8E-26 T 28-03-2018 IPR014318 Phage shock protein, PspG AM393_RS25350 74138c81a1b31493e37987b11021d2d4 154 Gene3D G3DSA:1.10.10.10 2 153 1.9E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS25350 74138c81a1b31493e37987b11021d2d4 154 Pfam PF01638 HxlR-like helix-turn-helix 21 106 3.8E-19 T 28-03-2018 IPR002577 Helix-turn-helix, HxlR type AM393_RS25350 74138c81a1b31493e37987b11021d2d4 154 SUPERFAMILY SSF46785 8 143 1.14E-35 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS05325 4790ed0aae9924d3afbd7a50592fa66c 116 SMART SM00877 44 116 5.2E-18 T 28-03-2018 IPR000249 Microcompartment protein, bacteria AM393_RS05325 4790ed0aae9924d3afbd7a50592fa66c 116 Pfam PF00936 BMC domain 45 111 6.9E-13 T 28-03-2018 IPR000249 Microcompartment protein, bacteria AM393_RS05325 4790ed0aae9924d3afbd7a50592fa66c 116 SUPERFAMILY SSF143414 44 108 2.62E-14 T 28-03-2018 AM393_RS05325 4790ed0aae9924d3afbd7a50592fa66c 116 PIRSF PIRSF012296 1 116 3.0E-57 T 28-03-2018 IPR009307 Ethanolamine utilisation EutS GO:0031469 AM393_RS24455 af31b084eca59fff1be627b8496c5d8b 307 Gene3D G3DSA:3.20.20.150 2 305 9.6E-52 T 28-03-2018 AM393_RS24455 af31b084eca59fff1be627b8496c5d8b 307 Pfam PF01261 Xylose isomerase-like TIM barrel 29 259 5.1E-34 T 28-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AM393_RS24455 af31b084eca59fff1be627b8496c5d8b 307 SUPERFAMILY SSF51658 5 305 7.19E-52 T 28-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AM393_RS28690 5db9f632da166e011343eb4fddb5ca1a 74 Pfam PF06667 Phage shock protein B 3 73 2.2E-31 T 28-03-2018 IPR009554 Phage shock protein B GO:0006355|GO:0009271 AM393_RS28690 5db9f632da166e011343eb4fddb5ca1a 74 TIGRFAM TIGR02976 phageshock_pspB: phage shock protein B 1 74 1.8E-32 T 28-03-2018 IPR009554 Phage shock protein B GO:0006355|GO:0009271 AM393_RS11765 bfb64f04d1d087665a390e9b76728d45 251 SUPERFAMILY SSF69572 2 246 2.75E-80 T 28-03-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 AM393_RS11765 bfb64f04d1d087665a390e9b76728d45 251 Gene3D G3DSA:3.40.50.720 1 245 2.5E-71 T 28-03-2018 AM393_RS11765 bfb64f04d1d087665a390e9b76728d45 251 Pfam PF00899 ThiF family 9 240 5.1E-64 T 28-03-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 AM393_RS11765 bfb64f04d1d087665a390e9b76728d45 251 TIGRFAM TIGR02356 adenyl_thiF: thiazole biosynthesis adenylyltransferase ThiF 8 209 3.3E-83 T 28-03-2018 IPR012731 Thiazole biosynthesis adenylyltransferase ThiF KEGG: 00730+2.7.7.73|MetaCyc: PWY-6891|MetaCyc: PWY-6892 AM393_RS15915 0560aeb92447d6e045be124c65d35f0e 280 Pfam PF00005 ABC transporter 44 205 1.5E-30 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS15915 0560aeb92447d6e045be124c65d35f0e 280 SMART SM00382 53 274 4.4E-5 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS15915 0560aeb92447d6e045be124c65d35f0e 280 Gene3D G3DSA:3.40.50.300 24 277 1.2E-55 T 28-03-2018 AM393_RS15915 0560aeb92447d6e045be124c65d35f0e 280 ProSitePatterns PS00211 ABC transporters family signature. 177 191 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS15915 0560aeb92447d6e045be124c65d35f0e 280 SUPERFAMILY SSF52540 27 266 7.06E-56 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS15915 0560aeb92447d6e045be124c65d35f0e 280 TIGRFAM TIGR02315 ABC_phnC: phosphonate ABC transporter, ATP-binding protein 27 273 5.4E-89 T 28-03-2018 IPR012693 ABC transporter, phosphonate import, PhnC GO:0005524|GO:0015416|GO:0015716|GO:0016020 AM393_RS04725 099b000e0d5294de938b26e3b55c1620 331 SUPERFAMILY SSF81345 5 325 1.7E-84 T 28-03-2018 IPR029022 ABC transporter, BtuC-like AM393_RS04725 099b000e0d5294de938b26e3b55c1620 331 Gene3D G3DSA:1.10.3470.10 2 331 3.7E-71 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AM393_RS04725 099b000e0d5294de938b26e3b55c1620 331 Pfam PF01032 FecCD transport family 12 324 1.6E-91 T 28-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 AM393_RS14040 739df1db649f1f25ece1ee7e85f70d75 156 Gene3D G3DSA:3.40.35.10 1 156 1.1E-49 T 28-03-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 AM393_RS14040 739df1db649f1f25ece1ee7e85f70d75 156 SUPERFAMILY SSF52728 1 154 1.12E-46 T 28-03-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 AM393_RS14040 739df1db649f1f25ece1ee7e85f70d75 156 Pfam PF03830 PTS system sorbose subfamily IIB component 2 149 5.4E-48 T 28-03-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 AM393_RS23790 10de33e20e5488cd8b863caa3189900c 833 Pfam PF13954 PapC N-terminal domain 30 175 2.1E-39 T 28-03-2018 IPR025885 PapC, N-terminal domain GO:0005515 AM393_RS23790 10de33e20e5488cd8b863caa3189900c 833 SUPERFAMILY SSF141729 56 167 2.62E-28 T 28-03-2018 AM393_RS23790 10de33e20e5488cd8b863caa3189900c 833 Pfam PF00577 Outer membrane usher protein 191 743 2.9E-168 T 28-03-2018 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 AM393_RS23790 10de33e20e5488cd8b863caa3189900c 833 Pfam PF13953 PapC C-terminal domain 752 813 9.4E-20 T 28-03-2018 IPR025949 PapC-like, C-terminal domain AM393_RS03680 669cd1b2bc3788f9455d9389211d2cb6 398 Gene3D G3DSA:3.30.420.40 200 398 4.6E-36 T 28-03-2018 AM393_RS03680 669cd1b2bc3788f9455d9389211d2cb6 398 Gene3D G3DSA:1.10.10.10 9 75 1.9E-6 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS03680 669cd1b2bc3788f9455d9389211d2cb6 398 SUPERFAMILY SSF53067 84 353 1.57E-38 T 28-03-2018 AM393_RS03680 669cd1b2bc3788f9455d9389211d2cb6 398 Gene3D G3DSA:3.30.420.40 76 199 7.9E-15 T 28-03-2018 AM393_RS03680 669cd1b2bc3788f9455d9389211d2cb6 398 SUPERFAMILY SSF46785 11 63 2.07E-9 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS03680 669cd1b2bc3788f9455d9389211d2cb6 398 Pfam PF00480 ROK family 88 352 3.4E-36 T 28-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 AM393_RS09350 079f9e0308ef57ab46f17d32c804fefd 311 Pfam PF00294 pfkB family carbohydrate kinase 5 305 3.4E-62 T 28-03-2018 IPR011611 Carbohydrate kinase PfkB AM393_RS09350 079f9e0308ef57ab46f17d32c804fefd 311 Gene3D G3DSA:3.40.1190.20 4 311 8.2E-62 T 28-03-2018 IPR029056 Ribokinase-like AM393_RS09350 079f9e0308ef57ab46f17d32c804fefd 311 SUPERFAMILY SSF53613 3 309 4.37E-83 T 28-03-2018 IPR029056 Ribokinase-like AM393_RS09350 079f9e0308ef57ab46f17d32c804fefd 311 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 257 270 - T 28-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AM393_RS04705 6019158e7b2aa7df7eb618f4dfd3fac1 97 Pfam PF10262 Rdx family 7 79 1.7E-32 T 28-03-2018 IPR011893 Selenoprotein, Rdx type AM393_RS04705 6019158e7b2aa7df7eb618f4dfd3fac1 97 SUPERFAMILY SSF52833 6 88 1.34E-27 T 28-03-2018 IPR012336 Thioredoxin-like fold AM393_RS04705 6019158e7b2aa7df7eb618f4dfd3fac1 97 Gene3D G3DSA:3.40.30.10 1 97 1.8E-39 T 28-03-2018 AM393_RS04705 6019158e7b2aa7df7eb618f4dfd3fac1 97 TIGRFAM TIGR02174 CXXU_selWTH: selT/selW/selH selenoprotein domain 7 78 7.4E-22 T 28-03-2018 IPR011893 Selenoprotein, Rdx type AM393_RS09185 9d61df5090822b75733904b336192569 872 TIGRFAM TIGR03030 CelA: cellulose synthase catalytic subunit (UDP-forming) 146 828 1.2E-299 T 28-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 AM393_RS09185 9d61df5090822b75733904b336192569 872 Gene3D G3DSA:3.90.550.10 273 510 8.5E-47 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM393_RS09185 9d61df5090822b75733904b336192569 872 SUPERFAMILY SSF141371 695 778 4.71E-8 T 28-03-2018 AM393_RS09185 9d61df5090822b75733904b336192569 872 SUPERFAMILY SSF53448 275 550 4.95E-48 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM393_RS09185 9d61df5090822b75733904b336192569 872 Gene3D G3DSA:2.40.10.220 690 798 5.6E-15 T 28-03-2018 AM393_RS09185 9d61df5090822b75733904b336192569 872 Pfam PF00535 Glycosyl transferase family 2 276 446 9.9E-34 T 28-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AM393_RS09185 9d61df5090822b75733904b336192569 872 Pfam PF07238 PilZ domain 694 790 9.3E-13 T 28-03-2018 IPR009875 PilZ domain GO:0035438 AM393_RS09185 9d61df5090822b75733904b336192569 872 PRINTS PR01439 Cellulose synthase subunit A signature 199 219 9.8E-54 T 28-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 AM393_RS09185 9d61df5090822b75733904b336192569 872 PRINTS PR01439 Cellulose synthase subunit A signature 363 387 9.8E-54 T 28-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 AM393_RS09185 9d61df5090822b75733904b336192569 872 PRINTS PR01439 Cellulose synthase subunit A signature 667 688 9.8E-54 T 28-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 AM393_RS09185 9d61df5090822b75733904b336192569 872 PRINTS PR01439 Cellulose synthase subunit A signature 227 252 9.8E-54 T 28-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 AM393_RS09185 9d61df5090822b75733904b336192569 872 PRINTS PR01439 Cellulose synthase subunit A signature 282 301 9.8E-54 T 28-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 AM393_RS09185 9d61df5090822b75733904b336192569 872 PRINTS PR01439 Cellulose synthase subunit A signature 524 550 9.8E-54 T 28-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 AM393_RS09185 9d61df5090822b75733904b336192569 872 PRINTS PR01439 Cellulose synthase subunit A signature 553 572 9.8E-54 T 28-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 AM393_RS09185 9d61df5090822b75733904b336192569 872 PRINTS PR01439 Cellulose synthase subunit A signature 593 612 9.8E-54 T 28-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 AM393_RS15530 813fd6909630de9a9f5e61a2af9dcfc1 265 Hamap MF_01119 UPF0294 protein YafD [yafD]. 1 260 53.076 T 28-03-2018 IPR022958 Uncharacterised protein family UPF0294 AM393_RS15530 813fd6909630de9a9f5e61a2af9dcfc1 265 Gene3D G3DSA:3.60.10.10 34 260 1.9E-15 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase AM393_RS15530 813fd6909630de9a9f5e61a2af9dcfc1 265 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 49 252 5.7E-8 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase AM393_RS15530 813fd6909630de9a9f5e61a2af9dcfc1 265 SUPERFAMILY SSF56219 44 260 2.62E-24 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase AM393_RS24560 0a079e98855d6d4415ca0d0b2f17e9fc 245 Gene3D G3DSA:3.40.50.880 16 240 5.5E-38 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AM393_RS24560 0a079e98855d6d4415ca0d0b2f17e9fc 245 Pfam PF00117 Glutamine amidotransferase class-I 77 192 7.7E-18 T 28-03-2018 IPR017926 Glutamine amidotransferase AM393_RS24560 0a079e98855d6d4415ca0d0b2f17e9fc 245 SUPERFAMILY SSF52317 29 205 3.7E-36 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AM393_RS03765 b6a94991043d949c37373a78b2eea432 243 Gene3D G3DSA:3.20.20.70 4 238 1.8E-108 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM393_RS03765 b6a94991043d949c37373a78b2eea432 243 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 6 238 6.9E-108 T 28-03-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 AM393_RS03765 b6a94991043d949c37373a78b2eea432 243 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 243 137.145 T 28-03-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 AM393_RS03765 b6a94991043d949c37373a78b2eea432 243 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 6 239 2.7E-114 T 28-03-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 AM393_RS03765 b6a94991043d949c37373a78b2eea432 243 SUPERFAMILY SSF63892 4 241 2.09E-103 T 28-03-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 AM393_RS18115 c3918bdb9089ba9ba0a7387626d1dacc 452 Pfam PF07690 Major Facilitator Superfamily 32 390 4.1E-38 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS18115 c3918bdb9089ba9ba0a7387626d1dacc 452 SUPERFAMILY SSF103473 18 434 2.22E-61 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS18115 c3918bdb9089ba9ba0a7387626d1dacc 452 Gene3D G3DSA:1.20.1250.20 21 215 4.6E-28 T 28-03-2018 AM393_RS18115 c3918bdb9089ba9ba0a7387626d1dacc 452 PIRSF PIRSF002808 9 451 1.0E-101 T 28-03-2018 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 AM393_RS18115 c3918bdb9089ba9ba0a7387626d1dacc 452 Gene3D G3DSA:1.20.1250.20 236 451 2.2E-24 T 28-03-2018 AM393_RS16505 c0030846ad0eee4e463f5ac90b63e513 133 PIRSF PIRSF003230 1 133 6.2E-21 T 28-03-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 AM393_RS16505 c0030846ad0eee4e463f5ac90b63e513 133 Pfam PF03061 Thioesterase superfamily 16 97 6.7E-15 T 28-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AM393_RS16505 c0030846ad0eee4e463f5ac90b63e513 133 SUPERFAMILY SSF54637 3 129 9.03E-39 T 28-03-2018 IPR029069 HotDog domain AM393_RS16505 c0030846ad0eee4e463f5ac90b63e513 133 Gene3D G3DSA:3.10.129.10 1 131 2.8E-35 T 28-03-2018 AM393_RS16505 c0030846ad0eee4e463f5ac90b63e513 133 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 7 118 5.0E-35 T 28-03-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 AM393_RS21830 37501c7b847ca6eee59f5824f30fd2c5 769 SUPERFAMILY SSF51445 327 633 3.79E-23 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily AM393_RS21830 37501c7b847ca6eee59f5824f30fd2c5 769 Gene3D G3DSA:2.60.120.10 23 224 7.7E-16 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AM393_RS21830 37501c7b847ca6eee59f5824f30fd2c5 769 SUPERFAMILY SSF46689 161 212 3.49E-7 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS21830 37501c7b847ca6eee59f5824f30fd2c5 769 Gene3D G3DSA:1.10.10.60 225 275 7.6E-13 T 28-03-2018 AM393_RS21830 37501c7b847ca6eee59f5824f30fd2c5 769 Gene3D G3DSA:2.60.40.1500 625 765 4.7E-14 T 28-03-2018 AM393_RS21830 37501c7b847ca6eee59f5824f30fd2c5 769 SMART SM00342 178 261 9.9E-28 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM393_RS21830 37501c7b847ca6eee59f5824f30fd2c5 769 SUPERFAMILY SSF46689 214 265 3.85E-11 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS21830 37501c7b847ca6eee59f5824f30fd2c5 769 Pfam PF12833 Helix-turn-helix domain 185 262 1.7E-20 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM393_RS21830 37501c7b847ca6eee59f5824f30fd2c5 769 SUPERFAMILY SSF51011 621 765 6.83E-6 T 28-03-2018 AM393_RS19000 1c2b30d663ec80ec6b27ff27603b9275 251 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 4 250 28.224 T 28-03-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00670+2.1.1.19|KEGG: 00780+2.1.1.197|MetaCyc: PWY-2201|MetaCyc: PWY-6519 AM393_RS19000 1c2b30d663ec80ec6b27ff27603b9275 251 TIGRFAM TIGR02072 BioC: malonyl-acyl carrier protein O-methyltransferase BioC 12 249 2.3E-62 T 28-03-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00670+2.1.1.19|KEGG: 00780+2.1.1.197|MetaCyc: PWY-2201|MetaCyc: PWY-6519 AM393_RS19000 1c2b30d663ec80ec6b27ff27603b9275 251 Pfam PF08241 Methyltransferase domain 47 138 3.5E-24 T 28-03-2018 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 AM393_RS19000 1c2b30d663ec80ec6b27ff27603b9275 251 Gene3D G3DSA:3.40.50.150 2 217 4.5E-38 T 28-03-2018 AM393_RS19000 1c2b30d663ec80ec6b27ff27603b9275 251 SUPERFAMILY SSF53335 10 178 3.53E-40 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM393_RS08335 a6c4af4d375c909660daf7ba358eb6e3 161 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 86 97 1.4E-16 T 28-03-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial AM393_RS08335 a6c4af4d375c909660daf7ba358eb6e3 161 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 98 113 1.4E-16 T 28-03-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial AM393_RS08335 a6c4af4d375c909660daf7ba358eb6e3 161 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 18 35 1.4E-16 T 28-03-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial AM393_RS08335 a6c4af4d375c909660daf7ba358eb6e3 161 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 75 85 1.4E-16 T 28-03-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial AM393_RS08335 a6c4af4d375c909660daf7ba358eb6e3 161 Pfam PF01478 Type IV leader peptidase family 14 115 3.5E-21 T 28-03-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 AM393_RS14615 50dd8cc8a898ce07201ba8ccc9c11955 782 Pfam PF03968 OstA-like protein 53 194 4.6E-29 T 28-03-2018 IPR005653 Organic solvent tolerance-like, N-terminal AM393_RS14615 50dd8cc8a898ce07201ba8ccc9c11955 782 Pfam PF04453 Organic solvent tolerance protein 309 693 5.8E-110 T 28-03-2018 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 AM393_RS14615 50dd8cc8a898ce07201ba8ccc9c11955 782 Gene3D G3DSA:2.60.450.10 44 210 1.7E-16 T 28-03-2018 AM393_RS14615 50dd8cc8a898ce07201ba8ccc9c11955 782 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 14 761 21.766 T 28-03-2018 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 AM393_RS20590 94afd9652c1c427393c890a4fccce671 197 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 63 7.4E-15 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM393_RS20590 94afd9652c1c427393c890a4fccce671 197 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 38 61 2.4E-8 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM393_RS20590 94afd9652c1c427393c890a4fccce671 197 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 17 30 2.4E-8 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM393_RS20590 94afd9652c1c427393c890a4fccce671 197 Gene3D G3DSA:1.10.10.60 51 196 1.7E-9 T 28-03-2018 AM393_RS20590 94afd9652c1c427393c890a4fccce671 197 SUPERFAMILY SSF46689 6 75 1.39E-17 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS20590 94afd9652c1c427393c890a4fccce671 197 Gene3D G3DSA:1.10.10.60 2 50 1.4E-18 T 28-03-2018 AM393_RS06810 6194c0927f12b25ef53851d852baffd4 386 SUPERFAMILY SSF56059 1 168 3.88E-90 T 28-03-2018 AM393_RS06810 6194c0927f12b25ef53851d852baffd4 386 SUPERFAMILY SSF56059 266 383 3.88E-90 T 28-03-2018 AM393_RS06810 6194c0927f12b25ef53851d852baffd4 386 Pfam PF03738 Glutathionylspermidine synthase preATP-grasp 12 384 8.0E-160 T 28-03-2018 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain AM393_RS06810 6194c0927f12b25ef53851d852baffd4 386 SUPERFAMILY SSF52440 174 279 2.5E-41 T 28-03-2018 IPR016185 Pre-ATP-grasp domain AM393_RS08520 cd5e9f1b08c6bc81a945a5c80c28bbb6 334 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 142 163 2.1E-29 T 28-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AM393_RS08520 cd5e9f1b08c6bc81a945a5c80c28bbb6 334 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 195 205 2.1E-29 T 28-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AM393_RS08520 cd5e9f1b08c6bc81a945a5c80c28bbb6 334 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 16 32 2.1E-29 T 28-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AM393_RS08520 cd5e9f1b08c6bc81a945a5c80c28bbb6 334 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 66 85 2.1E-29 T 28-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AM393_RS08520 cd5e9f1b08c6bc81a945a5c80c28bbb6 334 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 3 330 3.0E-117 T 28-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AM393_RS08520 cd5e9f1b08c6bc81a945a5c80c28bbb6 334 Gene3D G3DSA:1.10.240.10 191 313 1.3E-31 T 28-03-2018 AM393_RS08520 cd5e9f1b08c6bc81a945a5c80c28bbb6 334 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 12 21 - T 28-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM393_RS08520 cd5e9f1b08c6bc81a945a5c80c28bbb6 334 Gene3D G3DSA:3.40.50.620 1 190 7.7E-74 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM393_RS08520 cd5e9f1b08c6bc81a945a5c80c28bbb6 334 Pfam PF00579 tRNA synthetases class I (W and Y) 3 285 3.4E-89 T 28-03-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM393_RS08520 cd5e9f1b08c6bc81a945a5c80c28bbb6 334 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 3 331 42.407 T 28-03-2018 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 AM393_RS08520 cd5e9f1b08c6bc81a945a5c80c28bbb6 334 SUPERFAMILY SSF52374 5 330 6.49E-98 T 28-03-2018 AM393_RS00270 a518a36238959ac0cc7bd5e0152b898e 304 Gene3D G3DSA:3.40.50.10740 2 141 1.0E-39 T 28-03-2018 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal domain AM393_RS00270 a518a36238959ac0cc7bd5e0152b898e 304 Pfam PF02016 LD-carboxypeptidase 6 285 1.1E-67 T 28-03-2018 IPR003507 Peptidase family S66 AM393_RS00270 a518a36238959ac0cc7bd5e0152b898e 304 SUPERFAMILY SSF141986 139 286 4.45E-40 T 28-03-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain AM393_RS00270 a518a36238959ac0cc7bd5e0152b898e 304 SUPERFAMILY SSF52317 5 160 2.88E-34 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AM393_RS00270 a518a36238959ac0cc7bd5e0152b898e 304 Gene3D G3DSA:3.50.30.60 142 299 1.6E-39 T 28-03-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain AM393_RS00270 a518a36238959ac0cc7bd5e0152b898e 304 PIRSF PIRSF028757 1 300 1.1E-76 T 28-03-2018 IPR003507 Peptidase family S66 AM393_RS05975 182c9150295003dd358e88822c07cfdf 198 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 12 192 3.3E-45 T 28-03-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase AM393_RS05975 182c9150295003dd358e88822c07cfdf 198 Gene3D G3DSA:3.40.50.10420 4 198 3.6E-58 T 28-03-2018 AM393_RS05975 182c9150295003dd358e88822c07cfdf 198 SUPERFAMILY SSF100950 10 198 8.79E-57 T 28-03-2018 AM393_RS05975 182c9150295003dd358e88822c07cfdf 198 PIRSF PIRSF006806 7 195 5.1E-36 T 28-03-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase AM393_RS05975 182c9150295003dd358e88822c07cfdf 198 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 11 192 9.0E-53 T 28-03-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase AM393_RS07660 5157637bcff4fc550724f1c13b5c8474 188 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 27 142 1.2E-12 T 28-03-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 AM393_RS07660 5157637bcff4fc550724f1c13b5c8474 188 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 26 178 9.6E-74 T 28-03-2018 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AM393_RS07660 5157637bcff4fc550724f1c13b5c8474 188 SUPERFAMILY SSF56784 22 181 1.17E-42 T 28-03-2018 IPR023214 HAD-like domain AM393_RS07660 5157637bcff4fc550724f1c13b5c8474 188 Pfam PF08282 haloacid dehalogenase-like hydrolase 95 162 2.2E-9 T 28-03-2018 IPR023214 HAD-like domain AM393_RS07660 5157637bcff4fc550724f1c13b5c8474 188 PIRSF PIRSF006118 13 188 6.0E-75 T 28-03-2018 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AM393_RS07660 5157637bcff4fc550724f1c13b5c8474 188 Gene3D G3DSA:3.40.50.1000 2 188 6.0E-28 T 28-03-2018 IPR023214 HAD-like domain AM393_RS19350 06c7851852efa38c076074f76d5b12b0 303 SUPERFAMILY SSF161098 96 284 1.83E-29 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS19350 06c7851852efa38c076074f76d5b12b0 303 Gene3D G3DSA:1.10.3720.10 28 291 2.5E-45 T 28-03-2018 AM393_RS19350 06c7851852efa38c076074f76d5b12b0 303 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 119 302 2.7E-30 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS19350 06c7851852efa38c076074f76d5b12b0 303 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 25 72 1.9E-15 T 28-03-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain AM393_RS09745 df96212a4658ee3b179f325a3d01eb26 321 Pfam PF13437 HlyD family secretion protein 198 277 2.2E-14 T 28-03-2018 AM393_RS09745 df96212a4658ee3b179f325a3d01eb26 321 Gene3D G3DSA:1.10.287.470 120 162 1.0E-6 T 28-03-2018 AM393_RS09745 df96212a4658ee3b179f325a3d01eb26 321 Gene3D G3DSA:2.40.50.100 37 119 2.1E-8 T 28-03-2018 AM393_RS03555 b0e40604f5fd65e539236d162ce7f7d5 143 SUPERFAMILY SSF54919 1 141 2.1E-58 T 28-03-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AM393_RS03555 b0e40604f5fd65e539236d162ce7f7d5 143 Gene3D G3DSA:3.30.70.141 1 141 1.1E-52 T 28-03-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AM393_RS03555 b0e40604f5fd65e539236d162ce7f7d5 143 SMART SM00562 3 140 8.2E-86 T 28-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AM393_RS03555 b0e40604f5fd65e539236d162ce7f7d5 143 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 28-03-2018 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM393_RS03555 b0e40604f5fd65e539236d162ce7f7d5 143 Pfam PF00334 Nucleoside diphosphate kinase 4 137 5.5E-54 T 28-03-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AM393_RS03555 b0e40604f5fd65e539236d162ce7f7d5 143 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 34.823 T 28-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AM393_RS03555 b0e40604f5fd65e539236d162ce7f7d5 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 1.5E-40 T 28-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AM393_RS03555 b0e40604f5fd65e539236d162ce7f7d5 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 1.5E-40 T 28-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AM393_RS03555 b0e40604f5fd65e539236d162ce7f7d5 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 1.5E-40 T 28-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AM393_RS03555 b0e40604f5fd65e539236d162ce7f7d5 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 1.5E-40 T 28-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AM393_RS03555 b0e40604f5fd65e539236d162ce7f7d5 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 1.5E-40 T 28-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AM393_RS12370 622f8556999f407ce745746540159cff 332 Gene3D G3DSA:1.10.3470.10 44 325 2.4E-27 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AM393_RS12370 622f8556999f407ce745746540159cff 332 Pfam PF02653 Branched-chain amino acid transport system / permease component 54 319 8.5E-44 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AM393_RS16065 bab94f460765d5631f415ac43088b5c5 406 Gene3D G3DSA:1.20.1560.10 296 392 5.0E-4 T 28-03-2018 AM393_RS16065 bab94f460765d5631f415ac43088b5c5 406 Gene3D G3DSA:1.20.1560.10 70 284 2.4E-15 T 28-03-2018 AM393_RS16065 bab94f460765d5631f415ac43088b5c5 406 Pfam PF05992 SbmA/BacA-like family 80 393 3.7E-164 T 28-03-2018 IPR009248 SbmA/BacA-like GO:0005215|GO:0006810|GO:0016021 AM393_RS16065 bab94f460765d5631f415ac43088b5c5 406 SUPERFAMILY SSF90123 80 390 2.35E-8 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AM393_RS19710 c0e2b912e76d80e87167a9717b385df8 281 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 81 273 9.2E-14 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS19710 c0e2b912e76d80e87167a9717b385df8 281 Gene3D G3DSA:1.10.3720.10 11 273 2.0E-40 T 28-03-2018 AM393_RS19710 c0e2b912e76d80e87167a9717b385df8 281 SUPERFAMILY SSF161098 8 266 3.27E-51 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS20575 120d541e904ff6f368ee40aaf8f17b7c 183 SUPERFAMILY SSF89155 2 180 1.05E-40 T 28-03-2018 IPR020945 DMSO/Nitrate reductase chaperone AM393_RS20575 120d541e904ff6f368ee40aaf8f17b7c 183 PIRSF PIRSF004690 1 183 6.3E-55 T 28-03-2018 IPR026269 Tat proofreading chaperone DmsD-type AM393_RS20575 120d541e904ff6f368ee40aaf8f17b7c 183 Gene3D G3DSA:1.10.3480.10 1 183 7.8E-32 T 28-03-2018 IPR020945 DMSO/Nitrate reductase chaperone AM393_RS20575 120d541e904ff6f368ee40aaf8f17b7c 183 Pfam PF02613 Nitrate reductase delta subunit 36 146 1.9E-11 T 28-03-2018 IPR020945 DMSO/Nitrate reductase chaperone AM393_RS09060 bbba73053a8bb23e8b5ac22c4f658dec 111 Hamap MF_01088 Universal stress protein B [uspB]. 1 107 39.211 T 28-03-2018 IPR019598 Universal stress protein B AM393_RS09060 bbba73053a8bb23e8b5ac22c4f658dec 111 Pfam PF10625 Universal stress protein B (UspB) 1 107 5.8E-54 T 28-03-2018 IPR019598 Universal stress protein B AM393_RS11500 ba6470c88c61589259817337b54b02ab 754 Gene3D G3DSA:3.20.20.210 3 385 8.9E-140 T 28-03-2018 AM393_RS11500 ba6470c88c61589259817337b54b02ab 754 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 426 748 5.5E-161 T 28-03-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 AM393_RS11500 ba6470c88c61589259817337b54b02ab 754 Gene3D G3DSA:3.20.20.210 386 754 8.1E-129 T 28-03-2018 AM393_RS11500 ba6470c88c61589259817337b54b02ab 754 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 3 753 37.497 T 28-03-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 AM393_RS11500 ba6470c88c61589259817337b54b02ab 754 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 5 312 3.5E-125 T 28-03-2018 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 AM393_RS11500 ba6470c88c61589259817337b54b02ab 754 SUPERFAMILY SSF51726 391 752 2.09E-120 T 28-03-2018 AM393_RS11500 ba6470c88c61589259817337b54b02ab 754 SUPERFAMILY SSF51726 5 389 4.06E-114 T 28-03-2018 AM393_RS11500 ba6470c88c61589259817337b54b02ab 754 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 8 752 0.0 T 28-03-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 AM393_RS11500 ba6470c88c61589259817337b54b02ab 754 PIRSF PIRSF000382 2 754 0.0 T 28-03-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 AM393_RS16015 39db396c88ba7462e26cf94d8ecbad4e 469 PIRSF PIRSF006060 1 464 1.5E-86 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AM393_RS16015 39db396c88ba7462e26cf94d8ecbad4e 469 ProSitePatterns PS00218 Amino acid permeases signature. 45 76 - T 28-03-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 AM393_RS16015 39db396c88ba7462e26cf94d8ecbad4e 469 Pfam PF00324 Amino acid permease 20 460 1.4E-114 T 28-03-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 AM393_RS01180 0f6dadd4ef3f19d23318ea08c391f149 160 Pfam PF01475 Ferric uptake regulator family 30 149 2.7E-13 T 28-03-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 AM393_RS01180 0f6dadd4ef3f19d23318ea08c391f149 160 Gene3D G3DSA:1.10.10.10 12 96 9.3E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS01180 0f6dadd4ef3f19d23318ea08c391f149 160 SUPERFAMILY SSF46785 24 155 9.31E-26 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS04400 487fbe8fd52b4b9bd226ce2471fbb994 875 SUPERFAMILY SSF50447 455 551 3.01E-22 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain AM393_RS04400 487fbe8fd52b4b9bd226ce2471fbb994 875 SUPERFAMILY SSF55681 4 255 5.96E-108 T 28-03-2018 AM393_RS04400 487fbe8fd52b4b9bd226ce2471fbb994 875 SMART SM00863 653 696 3.7E-22 T 28-03-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 AM393_RS04400 487fbe8fd52b4b9bd226ce2471fbb994 875 PRINTS PR00980 Alanyl-tRNA synthetase signature 306 319 2.4E-33 T 28-03-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AM393_RS04400 487fbe8fd52b4b9bd226ce2471fbb994 875 PRINTS PR00980 Alanyl-tRNA synthetase signature 236 249 2.4E-33 T 28-03-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AM393_RS04400 487fbe8fd52b4b9bd226ce2471fbb994 875 PRINTS PR00980 Alanyl-tRNA synthetase signature 76 87 2.4E-33 T 28-03-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AM393_RS04400 487fbe8fd52b4b9bd226ce2471fbb994 875 PRINTS PR00980 Alanyl-tRNA synthetase signature 209 220 2.4E-33 T 28-03-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AM393_RS04400 487fbe8fd52b4b9bd226ce2471fbb994 875 PRINTS PR00980 Alanyl-tRNA synthetase signature 282 298 2.4E-33 T 28-03-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AM393_RS04400 487fbe8fd52b4b9bd226ce2471fbb994 875 Gene3D G3DSA:2.40.30.10 449 518 0.38 T 28-03-2018 AM393_RS04400 487fbe8fd52b4b9bd226ce2471fbb994 875 Pfam PF01411 tRNA synthetases class II (A) 7 556 1.3E-238 T 28-03-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 AM393_RS04400 487fbe8fd52b4b9bd226ce2471fbb994 875 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 7 854 0.0 T 28-03-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AM393_RS04400 487fbe8fd52b4b9bd226ce2471fbb994 875 Gene3D G3DSA:3.30.980.10 568 713 4.2E-47 T 28-03-2018 AM393_RS04400 487fbe8fd52b4b9bd226ce2471fbb994 875 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 653 696 7.9E-18 T 28-03-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 AM393_RS04400 487fbe8fd52b4b9bd226ce2471fbb994 875 Gene3D G3DSA:3.30.930.10 2 252 2.2E-117 T 28-03-2018 AM393_RS04400 487fbe8fd52b4b9bd226ce2471fbb994 875 Pfam PF02272 DHHA1 domain 733 871 3.1E-32 T 28-03-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 AM393_RS04400 487fbe8fd52b4b9bd226ce2471fbb994 875 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 875 210.003 T 28-03-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 AM393_RS04400 487fbe8fd52b4b9bd226ce2471fbb994 875 SUPERFAMILY SSF101353 256 465 2.48E-61 T 28-03-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 AM393_RS04400 487fbe8fd52b4b9bd226ce2471fbb994 875 Gene3D G3DSA:2.40.30.10 519 567 0.09 T 28-03-2018 AM393_RS04400 487fbe8fd52b4b9bd226ce2471fbb994 875 SUPERFAMILY SSF55186 552 708 3.92E-51 T 28-03-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 AM393_RS01750 fd61ea458ae58328fe4c90040cd32e32 337 SUPERFAMILY SSF53756 29 240 7.46E-11 T 28-03-2018 AM393_RS01750 fd61ea458ae58328fe4c90040cd32e32 337 Gene3D G3DSA:3.40.50.2000 159 298 8.4E-7 T 28-03-2018 AM393_RS23555 a8c0f7a35aa5fa699ef882de29f27622 253 Pfam PF00455 DeoR C terminal sensor domain 77 231 7.0E-48 T 28-03-2018 IPR014036 DeoR C-terminal sensor domain AM393_RS23555 a8c0f7a35aa5fa699ef882de29f27622 253 Gene3D G3DSA:1.10.10.10 2 60 4.4E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS23555 a8c0f7a35aa5fa699ef882de29f27622 253 Pfam PF08220 DeoR-like helix-turn-helix domain 6 59 5.8E-17 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM393_RS23555 a8c0f7a35aa5fa699ef882de29f27622 253 SMART SM00420 6 58 1.5E-18 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM393_RS23555 a8c0f7a35aa5fa699ef882de29f27622 253 SUPERFAMILY SSF46785 5 65 5.24E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS23555 a8c0f7a35aa5fa699ef882de29f27622 253 SMART SM01134 73 233 7.4E-66 T 28-03-2018 AM393_RS23555 a8c0f7a35aa5fa699ef882de29f27622 253 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 28-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 AM393_RS23555 a8c0f7a35aa5fa699ef882de29f27622 253 SUPERFAMILY SSF100950 78 233 1.36E-26 T 28-03-2018 AM393_RS23555 a8c0f7a35aa5fa699ef882de29f27622 253 Gene3D G3DSA:3.40.50.1360 66 237 1.2E-34 T 28-03-2018 AM393_RS23555 a8c0f7a35aa5fa699ef882de29f27622 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 2.7E-7 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM393_RS23555 a8c0f7a35aa5fa699ef882de29f27622 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 2.7E-7 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM393_RS08775 4721a5889f4ad5bc9b78c8c0d2be5a3e 331 SUPERFAMILY SSF47413 5 62 2.38E-13 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM393_RS08775 4721a5889f4ad5bc9b78c8c0d2be5a3e 331 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 64 309 2.1E-30 T 28-03-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain AM393_RS08775 4721a5889f4ad5bc9b78c8c0d2be5a3e 331 SMART SM00354 5 75 3.8E-26 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM393_RS08775 4721a5889f4ad5bc9b78c8c0d2be5a3e 331 SUPERFAMILY SSF53822 63 316 2.36E-60 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AM393_RS08775 4721a5889f4ad5bc9b78c8c0d2be5a3e 331 Gene3D G3DSA:3.40.50.2300 63 172 8.9E-26 T 28-03-2018 AM393_RS08775 4721a5889f4ad5bc9b78c8c0d2be5a3e 331 Gene3D G3DSA:1.10.260.40 7 62 5.6E-14 T 28-03-2018 AM393_RS08775 4721a5889f4ad5bc9b78c8c0d2be5a3e 331 Pfam PF00356 Bacterial regulatory proteins, lacI family 8 52 1.2E-17 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM393_RS08775 4721a5889f4ad5bc9b78c8c0d2be5a3e 331 Gene3D G3DSA:3.40.50.2300 173 331 1.9E-37 T 28-03-2018 AM393_RS08775 4721a5889f4ad5bc9b78c8c0d2be5a3e 331 ProSitePatterns PS00356 LacI-type HTH domain signature. 8 26 - T 28-03-2018 AM393_RS18025 0b01193539f10bb3cf809717df2090a3 391 SUPERFAMILY SSF56322 20 389 1.28E-83 T 28-03-2018 IPR005801 ADC synthase GO:0009058 AM393_RS18025 0b01193539f10bb3cf809717df2090a3 391 Gene3D G3DSA:3.60.120.10 1 391 3.9E-96 T 28-03-2018 IPR005801 ADC synthase GO:0009058 AM393_RS18025 0b01193539f10bb3cf809717df2090a3 391 Pfam PF00425 chorismate binding enzyme 126 380 1.7E-66 T 28-03-2018 IPR015890 Chorismate-utilising enzyme, C-terminal AM393_RS18025 0b01193539f10bb3cf809717df2090a3 391 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 113 387 1.7E-80 T 28-03-2018 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 AM393_RS01940 cee7fbc4a510271e7c34c98328fe3cd3 313 SUPERFAMILY SSF100950 59 311 1.42E-55 T 28-03-2018 AM393_RS01940 cee7fbc4a510271e7c34c98328fe3cd3 313 Pfam PF04198 Putative sugar-binding domain 59 311 5.4E-74 T 28-03-2018 IPR007324 Sugar-binding domain, putative GO:0030246 AM393_RS01940 cee7fbc4a510271e7c34c98328fe3cd3 313 Gene3D G3DSA:1.10.10.60 1 56 2.1E-13 T 28-03-2018 AM393_RS01940 cee7fbc4a510271e7c34c98328fe3cd3 313 Gene3D G3DSA:3.40.50.1360 61 311 6.9E-28 T 28-03-2018 AM393_RS01225 71045f1c66d40ec90d061929cd9877b3 434 SUPERFAMILY SSF56322 10 432 2.49E-95 T 28-03-2018 IPR005801 ADC synthase GO:0009058 AM393_RS01225 71045f1c66d40ec90d061929cd9877b3 434 TIGRFAM TIGR03494 salicyl_syn: salicylate synthase 15 434 2.0E-202 T 28-03-2018 IPR019996 Salicylate synthase GO:0008909|GO:0016833 KEGG: 00130+5.4.4.2|KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6120|MetaCyc: PWY-6406|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AM393_RS01225 71045f1c66d40ec90d061929cd9877b3 434 Gene3D G3DSA:3.60.120.10 7 433 8.5E-84 T 28-03-2018 IPR005801 ADC synthase GO:0009058 AM393_RS01225 71045f1c66d40ec90d061929cd9877b3 434 Pfam PF00425 chorismate binding enzyme 173 424 2.9E-68 T 28-03-2018 IPR015890 Chorismate-utilising enzyme, C-terminal AM393_RS19480 6caaad2ab287dde8df0a12ea8e5267f0 285 Gene3D G3DSA:3.40.50.150 153 262 7.0E-17 T 28-03-2018 AM393_RS19480 6caaad2ab287dde8df0a12ea8e5267f0 285 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 28 42 7.1E-17 T 28-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AM393_RS19480 6caaad2ab287dde8df0a12ea8e5267f0 285 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 47 60 7.1E-17 T 28-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AM393_RS19480 6caaad2ab287dde8df0a12ea8e5267f0 285 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 173 185 7.1E-17 T 28-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AM393_RS19480 6caaad2ab287dde8df0a12ea8e5267f0 285 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 7 23 7.1E-17 T 28-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AM393_RS19480 6caaad2ab287dde8df0a12ea8e5267f0 285 Gene3D G3DSA:1.10.1020.10 54 152 2.8E-31 T 28-03-2018 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 AM393_RS19480 6caaad2ab287dde8df0a12ea8e5267f0 285 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 7 244 7.6E-72 T 28-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AM393_RS19480 6caaad2ab287dde8df0a12ea8e5267f0 285 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 176 182 - T 28-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AM393_RS19480 6caaad2ab287dde8df0a12ea8e5267f0 285 TIGRFAM TIGR00571 dam: DNA adenine methylase 1 260 4.5E-97 T 28-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AM393_RS19480 6caaad2ab287dde8df0a12ea8e5267f0 285 PIRSF PIRSF000398 1 263 4.7E-64 T 28-03-2018 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 AM393_RS19480 6caaad2ab287dde8df0a12ea8e5267f0 285 SUPERFAMILY SSF53335 2 260 6.66E-72 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM393_RS21600 9d5f5d9fef50473854f7971ce275cfec 302 SUPERFAMILY SSF53850 90 299 1.81E-33 T 28-03-2018 AM393_RS21600 9d5f5d9fef50473854f7971ce275cfec 302 SUPERFAMILY SSF46785 1 83 1.48E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS21600 9d5f5d9fef50473854f7971ce275cfec 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 7.7E-16 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS21600 9d5f5d9fef50473854f7971ce275cfec 302 Pfam PF03466 LysR substrate binding domain 90 293 1.4E-35 T 28-03-2018 IPR005119 LysR, substrate-binding AM393_RS21600 9d5f5d9fef50473854f7971ce275cfec 302 Gene3D G3DSA:3.40.190.10 88 177 8.6E-20 T 28-03-2018 AM393_RS21600 9d5f5d9fef50473854f7971ce275cfec 302 Gene3D G3DSA:1.10.10.10 1 86 2.1E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS21600 9d5f5d9fef50473854f7971ce275cfec 302 Gene3D G3DSA:3.40.190.10 178 266 1.4E-19 T 28-03-2018 AM393_RS06780 2baa1700451c282bf2695101ce9be517 191 Gene3D G3DSA:3.40.50.1820 2 189 1.2E-18 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AM393_RS06780 2baa1700451c282bf2695101ce9be517 191 Pfam PF05728 Uncharacterised protein family (UPF0227) 4 188 8.7E-70 T 28-03-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA AM393_RS06780 2baa1700451c282bf2695101ce9be517 191 SUPERFAMILY SSF53474 3 188 2.21E-20 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AM393_RS00450 144af7f926ff68511ad57301e0867b93 24 Pfam PF10736 Protein of unknown function (DUF2627) 1 24 8.6E-18 T 28-03-2018 IPR019672 Protein of unknown function DUF2627 AM393_RS03200 e47d02234b4e80ad23e9fdab5c40bc54 149 Pfam PF11143 Protein of unknown function (DUF2919) 8 145 1.8E-48 T 28-03-2018 IPR021318 Protein of unknown function DUF2919 AM393_RS00410 b6a589d8bac483dc4b863cd82cd18ab5 266 TIGRFAM TIGR00822 EII-Sor: PTS system, mannose/fructose/sorbose family, IIC component 1 266 2.9E-129 T 28-03-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 AM393_RS00410 b6a589d8bac483dc4b863cd82cd18ab5 266 Pfam PF03609 PTS system sorbose-specific iic component 5 237 2.1E-75 T 28-03-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 AM393_RS04410 6412a90304bb57f6797b6e554f05b698 352 ProSitePatterns PS00321 recA signature. 215 223 - T 28-03-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 AM393_RS04410 6412a90304bb57f6797b6e554f05b698 352 SUPERFAMILY SSF54752 272 327 5.89E-21 T 28-03-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal AM393_RS04410 6412a90304bb57f6797b6e554f05b698 352 PRINTS PR00142 RecA protein signature 129 158 2.6E-83 T 28-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AM393_RS04410 6412a90304bb57f6797b6e554f05b698 352 PRINTS PR00142 RecA protein signature 299 316 2.6E-83 T 28-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AM393_RS04410 6412a90304bb57f6797b6e554f05b698 352 PRINTS PR00142 RecA protein signature 95 124 2.6E-83 T 28-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AM393_RS04410 6412a90304bb57f6797b6e554f05b698 352 PRINTS PR00142 RecA protein signature 167 196 2.6E-83 T 28-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AM393_RS04410 6412a90304bb57f6797b6e554f05b698 352 PRINTS PR00142 RecA protein signature 212 240 2.6E-83 T 28-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AM393_RS04410 6412a90304bb57f6797b6e554f05b698 352 PRINTS PR00142 RecA protein signature 245 274 2.6E-83 T 28-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AM393_RS04410 6412a90304bb57f6797b6e554f05b698 352 SUPERFAMILY SSF52540 6 269 3.61E-66 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS04410 6412a90304bb57f6797b6e554f05b698 352 Gene3D G3DSA:3.40.50.300 28 270 1.0E-46 T 28-03-2018 AM393_RS04410 6412a90304bb57f6797b6e554f05b698 352 SMART SM00382 59 230 4.5E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS04410 6412a90304bb57f6797b6e554f05b698 352 Gene3D G3DSA:3.30.250.10 272 328 5.9E-25 T 28-03-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal AM393_RS04410 6412a90304bb57f6797b6e554f05b698 352 Hamap MF_00268 Protein RecA [recA]. 7 331 50.956 T 28-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AM393_RS04410 6412a90304bb57f6797b6e554f05b698 352 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 6 326 2.1E-172 T 28-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AM393_RS04410 6412a90304bb57f6797b6e554f05b698 352 Pfam PF00154 recA bacterial DNA recombination protein 9 270 4.0E-142 T 28-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AM393_RS09720 8197a6f8ad496bcc1aa65a07798c7425 198 SUPERFAMILY SSF46689 5 86 4.39E-11 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS09720 8197a6f8ad496bcc1aa65a07798c7425 198 Hamap MF_01839 Nucleoid occlusion factor SlmA [slmA]. 1 198 40.885 T 28-03-2018 IPR023769 Nucleoid occlusion factor SlmA GO:0010974 AM393_RS09720 8197a6f8ad496bcc1aa65a07798c7425 198 Gene3D G3DSA:1.10.357.10 61 193 6.8E-17 T 28-03-2018 AM393_RS09720 8197a6f8ad496bcc1aa65a07798c7425 198 SUPERFAMILY SSF48498 84 192 2.18E-6 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AM393_RS09720 8197a6f8ad496bcc1aa65a07798c7425 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 61 5.1E-9 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM393_RS09720 8197a6f8ad496bcc1aa65a07798c7425 198 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 58 - T 28-03-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AM393_RS09720 8197a6f8ad496bcc1aa65a07798c7425 198 Gene3D G3DSA:1.10.10.60 2 60 1.4E-10 T 28-03-2018 AM393_RS21605 8a3767272162e2de97a41263d4173618 436 SUPERFAMILY SSF103473 5 419 5.23E-86 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS21605 8a3767272162e2de97a41263d4173618 436 Pfam PF07690 Major Facilitator Superfamily 21 384 3.3E-49 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS21605 8a3767272162e2de97a41263d4173618 436 Gene3D G3DSA:1.20.1250.20 228 424 5.9E-26 T 28-03-2018 AM393_RS21605 8a3767272162e2de97a41263d4173618 436 Gene3D G3DSA:1.20.1250.20 5 215 9.0E-36 T 28-03-2018 AM393_RS15135 aff17d9545247f30f08b6574290ebe1a 809 Gene3D G3DSA:3.40.50.300 3 162 8.2E-23 T 28-03-2018 AM393_RS15135 aff17d9545247f30f08b6574290ebe1a 809 Pfam PF08482 ATP-dependent helicase C-terminal 664 796 1.7E-53 T 28-03-2018 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal AM393_RS15135 aff17d9545247f30f08b6574290ebe1a 809 SMART SM00847 388 491 4.6E-10 T 28-03-2018 IPR007502 Helicase-associated domain GO:0004386 AM393_RS15135 aff17d9545247f30f08b6574290ebe1a 809 Pfam PF04408 Helicase associated domain (HA2) 389 469 8.4E-11 T 28-03-2018 IPR007502 Helicase-associated domain GO:0004386 AM393_RS15135 aff17d9545247f30f08b6574290ebe1a 809 Pfam PF00271 Helicase conserved C-terminal domain 204 327 5.8E-13 T 28-03-2018 IPR001650 Helicase, C-terminal AM393_RS15135 aff17d9545247f30f08b6574290ebe1a 809 PIRSF PIRSF005496 1 809 0.0 T 28-03-2018 AM393_RS15135 aff17d9545247f30f08b6574290ebe1a 809 Pfam PF00270 DEAD/DEAH box helicase 19 164 3.6E-9 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AM393_RS15135 aff17d9545247f30f08b6574290ebe1a 809 SMART SM00490 226 328 8.9E-16 T 28-03-2018 IPR001650 Helicase, C-terminal AM393_RS15135 aff17d9545247f30f08b6574290ebe1a 809 TIGRFAM TIGR01970 DEAH_box_HrpB: ATP-dependent helicase HrpB 4 808 0.0 T 28-03-2018 IPR010225 ATP-dependent helicase HrpB GO:0008026 AM393_RS15135 aff17d9545247f30f08b6574290ebe1a 809 SUPERFAMILY SSF52540 17 338 2.92E-49 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS15135 aff17d9545247f30f08b6574290ebe1a 809 SMART SM00487 2 186 7.1E-21 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AM393_RS15135 aff17d9545247f30f08b6574290ebe1a 809 Gene3D G3DSA:3.40.50.300 180 349 2.4E-43 T 28-03-2018 AM393_RS06995 d687a6b7f13a19c1604b32a5a02aa261 267 PRINTS PR00783 Major intrinsic protein family signature 9 28 6.0E-50 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AM393_RS06995 d687a6b7f13a19c1604b32a5a02aa261 267 PRINTS PR00783 Major intrinsic protein family signature 234 254 6.0E-50 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AM393_RS06995 d687a6b7f13a19c1604b32a5a02aa261 267 PRINTS PR00783 Major intrinsic protein family signature 151 169 6.0E-50 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AM393_RS06995 d687a6b7f13a19c1604b32a5a02aa261 267 PRINTS PR00783 Major intrinsic protein family signature 48 72 6.0E-50 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AM393_RS06995 d687a6b7f13a19c1604b32a5a02aa261 267 PRINTS PR00783 Major intrinsic protein family signature 184 206 6.0E-50 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AM393_RS06995 d687a6b7f13a19c1604b32a5a02aa261 267 PRINTS PR00783 Major intrinsic protein family signature 85 104 6.0E-50 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AM393_RS06995 d687a6b7f13a19c1604b32a5a02aa261 267 TIGRFAM TIGR00861 MIP: MIP family channel proteins 13 251 2.3E-70 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AM393_RS06995 d687a6b7f13a19c1604b32a5a02aa261 267 Gene3D G3DSA:1.20.1080.10 1 259 9.2E-75 T 28-03-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 AM393_RS06995 d687a6b7f13a19c1604b32a5a02aa261 267 ProSitePatterns PS00221 MIP family signature. 66 74 - T 28-03-2018 IPR022357 Major intrinsic protein, conserved site GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AM393_RS06995 d687a6b7f13a19c1604b32a5a02aa261 267 SUPERFAMILY SSF81338 8 257 2.75E-75 T 28-03-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 AM393_RS06995 d687a6b7f13a19c1604b32a5a02aa261 267 Pfam PF00230 Major intrinsic protein 3 251 8.9E-69 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AM393_RS10570 eb2e9eda9c57771b4d746f97541dac54 499 Pfam PF07728 AAA domain (dynein-related subfamily) 41 171 2.9E-25 T 28-03-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 AM393_RS10570 eb2e9eda9c57771b4d746f97541dac54 499 Gene3D G3DSA:3.40.50.300 6 218 1.8E-17 T 28-03-2018 AM393_RS10570 eb2e9eda9c57771b4d746f97541dac54 499 SUPERFAMILY SSF52540 22 289 2.45E-18 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS10570 eb2e9eda9c57771b4d746f97541dac54 499 Gene3D G3DSA:1.10.8.300 219 289 0.0016 T 28-03-2018 AM393_RS10570 eb2e9eda9c57771b4d746f97541dac54 499 SMART SM00382 38 187 1.3E-6 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS10570 eb2e9eda9c57771b4d746f97541dac54 499 Pfam PF12592 Protein of unknown function (DUF3763) 444 498 3.0E-21 T 28-03-2018 IPR022547 ATPase, RavA, C-terminal GO:0016820 AM393_RS27055 f07cbb027635bb82d83f89d20338cf9f 130 Gene3D G3DSA:1.10.10.450 3 56 3.1E-27 T 28-03-2018 AM393_RS27055 f07cbb027635bb82d83f89d20338cf9f 130 SUPERFAMILY SSF140581 60 126 2.35E-28 T 28-03-2018 AM393_RS27055 f07cbb027635bb82d83f89d20338cf9f 130 Pfam PF05261 TraM protein, DNA-binding 1 126 3.7E-65 T 28-03-2018 IPR007925 Relaxosome protein TraM GO:0000746|GO:0003677 AM393_RS27055 f07cbb027635bb82d83f89d20338cf9f 130 SUPERFAMILY SSF47729 2 56 2.71E-23 T 28-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 AM393_RS27055 f07cbb027635bb82d83f89d20338cf9f 130 ProDom PD008204 TRAM PLASMID CONJUGATION DNA-BINDING 3D-STRUCTURE TRANSFER: SEQUENCING DIRECT CONJUGATIVE MATING 1 126 2.0E-44 T 28-03-2018 IPR007925 Relaxosome protein TraM GO:0000746|GO:0003677 AM393_RS12390 17ce6fc253e9c3b4eadf8f0bfa779783 252 Gene3D G3DSA:3.60.15.10 1 252 1.5E-41 T 28-03-2018 IPR001279 Metallo-beta-lactamase AM393_RS12390 17ce6fc253e9c3b4eadf8f0bfa779783 252 SUPERFAMILY SSF56281 5 250 7.05E-29 T 28-03-2018 IPR001279 Metallo-beta-lactamase AM393_RS12390 17ce6fc253e9c3b4eadf8f0bfa779783 252 TIGRFAM TIGR03307 PhnP: phosphonate metabolism protein PhnP 3 248 3.2E-116 T 28-03-2018 IPR017693 Phosphonate metabolism protein PhnP GO:0008081|GO:0019700 KEGG: 00440+3.1.4.55|MetaCyc: PWY-7805|MetaCyc: PWY-7807 AM393_RS12390 17ce6fc253e9c3b4eadf8f0bfa779783 252 Pfam PF12706 Beta-lactamase superfamily domain 68 223 3.0E-13 T 28-03-2018 IPR001279 Metallo-beta-lactamase AM393_RS22090 4c6db0ade647c9a46c1836af661cd6eb 82 Pfam PF16080 Bacteriophage holin family HP1 5 65 1.6E-7 T 28-03-2018 IPR032118 Bacteriophage holin HP1 family AM393_RS20920 f59270615cde88a3f9967ac79c3a8473 285 SUPERFAMILY SSF161098 6 274 7.1E-53 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS20920 f59270615cde88a3f9967ac79c3a8473 285 Gene3D G3DSA:1.10.3720.10 9 284 1.8E-42 T 28-03-2018 AM393_RS20920 f59270615cde88a3f9967ac79c3a8473 285 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 83 282 5.4E-18 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS16070 651f474690bc0a794302e5a4280e60a8 368 SUPERFAMILY SSF54511 196 276 6.43E-5 T 28-03-2018 IPR009017 Green fluorescent protein AM393_RS16070 651f474690bc0a794302e5a4280e60a8 368 ProDom PD041438 LIPOPROTEIN YAIW PRECURSOR SIGNAL MEMBRANE OUTER LIPOPROTEIN ECS0428 XAC0592 SECRETED 28 365 1.0E-174 T 28-03-2018 IPR011673 Protein of unknown function DUF1615 AM393_RS16070 651f474690bc0a794302e5a4280e60a8 368 Pfam PF07759 Protein of unknown function (DUF1615) 53 367 1.4E-147 T 28-03-2018 IPR011673 Protein of unknown function DUF1615 AM393_RS24105 0769078534b192f850e838267d7f2e55 317 Gene3D G3DSA:3.40.50.2300 33 139 8.2E-23 T 28-03-2018 AM393_RS24105 0769078534b192f850e838267d7f2e55 317 Pfam PF13407 Periplasmic binding protein domain 43 291 2.7E-51 T 28-03-2018 IPR025997 Periplasmic binding protein AM393_RS24105 0769078534b192f850e838267d7f2e55 317 SUPERFAMILY SSF53822 33 312 1.04E-69 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AM393_RS24105 0769078534b192f850e838267d7f2e55 317 Gene3D G3DSA:3.40.50.2300 140 314 3.1E-36 T 28-03-2018 AM393_RS13600 06de4174101081d0a33c765c684f04bd 406 SUPERFAMILY SSF53335 18 359 6.0E-79 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM393_RS13600 06de4174101081d0a33c765c684f04bd 406 Gene3D G3DSA:3.40.50.150 126 405 3.3E-66 T 28-03-2018 AM393_RS13600 06de4174101081d0a33c765c684f04bd 406 Pfam PF02353 Mycolic acid cyclopropane synthetase 130 401 3.1E-89 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM393_RS13600 06de4174101081d0a33c765c684f04bd 406 PIRSF PIRSF003085 17 406 2.7E-126 T 28-03-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 AM393_RS26915 95c590b399e899219353a6dad9099fca 587 Pfam PF05947 Type VI secretion system, TssF 6 582 1.5E-187 T 28-03-2018 IPR010272 Type VI secretion system, TssF-like AM393_RS26915 95c590b399e899219353a6dad9099fca 587 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 6 581 5.0E-168 T 28-03-2018 IPR010272 Type VI secretion system, TssF-like AM393_RS26915 95c590b399e899219353a6dad9099fca 587 PIRSF PIRSF028304 1 585 3.0E-160 T 28-03-2018 IPR010272 Type VI secretion system, TssF-like AM393_RS14065 8e6f75606959ed3df5e4c1c59f865023 312 Gene3D G3DSA:1.10.10.60 246 308 8.1E-5 T 28-03-2018 AM393_RS14065 8e6f75606959ed3df5e4c1c59f865023 312 Pfam PF04754 Putative transposase, YhgA-like 8 209 7.6E-87 T 28-03-2018 IPR006842 Transposase (putative), YhgA-like AM393_RS14065 8e6f75606959ed3df5e4c1c59f865023 312 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 9 308 4.4E-54 T 28-03-2018 IPR010106 Recombination-promoting nuclease RpnA AM393_RS17545 d94dc6e10db462d385116693b15331e6 227 SUPERFAMILY SSF46894 152 215 4.42E-18 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM393_RS17545 d94dc6e10db462d385116693b15331e6 227 Pfam PF00196 Bacterial regulatory proteins, luxR family 161 214 7.5E-16 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS17545 d94dc6e10db462d385116693b15331e6 227 Gene3D G3DSA:1.10.10.10 161 221 1.3E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS17545 d94dc6e10db462d385116693b15331e6 227 Gene3D G3DSA:3.30.450.80 1 156 1.9E-6 T 28-03-2018 AM393_RS17545 d94dc6e10db462d385116693b15331e6 227 ProSitePatterns PS00622 LuxR-type HTH domain signature. 176 203 - T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS17545 d94dc6e10db462d385116693b15331e6 227 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 162 176 1.1E-11 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS17545 d94dc6e10db462d385116693b15331e6 227 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 192 204 1.1E-11 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS17545 d94dc6e10db462d385116693b15331e6 227 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 176 192 1.1E-11 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS17545 d94dc6e10db462d385116693b15331e6 227 SMART SM00421 159 216 3.3E-21 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS04830 8e2ec85a015322fe5789a5d7b6e2197c 105 Pfam PF04977 Septum formation initiator 11 89 2.6E-30 T 28-03-2018 IPR007060 Septum formation initiator FtsL/DivIC GO:0007049 AM393_RS04830 8e2ec85a015322fe5789a5d7b6e2197c 105 Gene3D G3DSA:1.20.5.1000 27 104 4.9E-4 T 28-03-2018 AM393_RS04830 8e2ec85a015322fe5789a5d7b6e2197c 105 Hamap MF_00599 Cell division protein FtsB [ftsB]. 1 90 36.297 T 28-03-2018 IPR023081 Cell division protein FtsB AM393_RS04695 488eac8a2c229e915834cf88ea513000 313 Pfam PF03547 Membrane transport protein 170 305 7.6E-15 T 28-03-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 AM393_RS04695 488eac8a2c229e915834cf88ea513000 313 Pfam PF03547 Membrane transport protein 9 155 3.2E-14 T 28-03-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 AM393_RS02570 14f335301d7fda5ed45b1929f05e3954 261 SMART SM00346 7 95 8.8E-31 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AM393_RS02570 14f335301d7fda5ed45b1929f05e3954 261 Pfam PF09339 IclR helix-turn-helix domain 9 55 1.0E-6 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AM393_RS02570 14f335301d7fda5ed45b1929f05e3954 261 SUPERFAMILY SSF46785 7 79 8.16E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS02570 14f335301d7fda5ed45b1929f05e3954 261 Gene3D G3DSA:1.10.10.10 2 76 1.4E-8 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS02570 14f335301d7fda5ed45b1929f05e3954 261 Pfam PF01614 Bacterial transcriptional regulator 122 247 2.1E-39 T 28-03-2018 IPR014757 Transcription regulator IclR, C-terminal AM393_RS02570 14f335301d7fda5ed45b1929f05e3954 261 SUPERFAMILY SSF55781 77 251 3.53E-48 T 28-03-2018 IPR029016 GAF domain-like AM393_RS02570 14f335301d7fda5ed45b1929f05e3954 261 Gene3D G3DSA:3.30.450.40 77 254 1.0E-48 T 28-03-2018 IPR029016 GAF domain-like AM393_RS05735 deb52e2b65e40c0f572fa2c1f276c7b0 341 Pfam PF13437 HlyD family secretion protein 211 293 1.8E-12 T 28-03-2018 AM393_RS05735 deb52e2b65e40c0f572fa2c1f276c7b0 341 SUPERFAMILY SSF111369 46 112 9.02E-13 T 28-03-2018 AM393_RS05735 deb52e2b65e40c0f572fa2c1f276c7b0 341 Pfam PF13533 Biotin-lipoyl like 49 95 8.1E-14 T 28-03-2018 AM393_RS05735 deb52e2b65e40c0f572fa2c1f276c7b0 341 Gene3D G3DSA:1.20.1600.10 29 334 4.1E-26 T 28-03-2018 AM393_RS05735 deb52e2b65e40c0f572fa2c1f276c7b0 341 SUPERFAMILY SSF111369 183 295 1.12E-8 T 28-03-2018 AM393_RS14420 3876980d194401be313b0caf670c724c 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 1.5E-15 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS14420 3876980d194401be313b0caf670c724c 298 Gene3D G3DSA:3.40.190.10 186 264 5.6E-4 T 28-03-2018 AM393_RS14420 3876980d194401be313b0caf670c724c 298 SUPERFAMILY SSF46785 2 85 1.36E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS14420 3876980d194401be313b0caf670c724c 298 Gene3D G3DSA:1.10.10.10 1 86 7.6E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS14420 3876980d194401be313b0caf670c724c 298 Pfam PF03466 LysR substrate binding domain 96 284 1.6E-10 T 28-03-2018 IPR005119 LysR, substrate-binding AM393_RS14420 3876980d194401be313b0caf670c724c 298 SUPERFAMILY SSF53850 90 287 5.43E-25 T 28-03-2018 AM393_RS14420 3876980d194401be313b0caf670c724c 298 Gene3D G3DSA:3.40.190.10 94 185 0.0015 T 28-03-2018 AM393_RS23490 5b64f8c7813124bfb31081a7a1dfdf6d 124 SUPERFAMILY SSF46689 62 109 9.41E-10 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS23490 5b64f8c7813124bfb31081a7a1dfdf6d 124 SUPERFAMILY SSF46689 10 59 2.11E-11 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS23490 5b64f8c7813124bfb31081a7a1dfdf6d 124 SMART SM00342 25 108 6.5E-31 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM393_RS23490 5b64f8c7813124bfb31081a7a1dfdf6d 124 Gene3D G3DSA:1.10.10.60 1 62 9.6E-18 T 28-03-2018 AM393_RS23490 5b64f8c7813124bfb31081a7a1dfdf6d 124 Gene3D G3DSA:1.10.10.60 63 124 1.9E-12 T 28-03-2018 AM393_RS23490 5b64f8c7813124bfb31081a7a1dfdf6d 124 Pfam PF12833 Helix-turn-helix domain 32 108 4.0E-18 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM393_RS23490 5b64f8c7813124bfb31081a7a1dfdf6d 124 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 62 104 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM393_RS08075 839e13bf6ea0088950a435fa20e50c3c 216 SUPERFAMILY SSF48498 85 199 1.08E-14 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AM393_RS08075 839e13bf6ea0088950a435fa20e50c3c 216 Pfam PF08361 MAATS-type transcriptional repressor, C-terminal region 84 199 2.8E-36 T 28-03-2018 IPR013572 Transcription regulator MAATS, C-terminal GO:0003677 AM393_RS08075 839e13bf6ea0088950a435fa20e50c3c 216 Gene3D G3DSA:1.10.10.60 1 49 1.3E-18 T 28-03-2018 AM393_RS08075 839e13bf6ea0088950a435fa20e50c3c 216 Gene3D G3DSA:1.10.10.60 50 152 8.2E-12 T 28-03-2018 AM393_RS08075 839e13bf6ea0088950a435fa20e50c3c 216 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 62 7.9E-17 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM393_RS08075 839e13bf6ea0088950a435fa20e50c3c 216 SUPERFAMILY SSF46689 1 65 4.1E-17 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS08075 839e13bf6ea0088950a435fa20e50c3c 216 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 58 - T 28-03-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AM393_RS08075 839e13bf6ea0088950a435fa20e50c3c 216 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 2.3E-9 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM393_RS08075 839e13bf6ea0088950a435fa20e50c3c 216 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 2.3E-9 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM393_RS19750 b9dff939f72f53f84ca00924dc4aec1f 243 Gene3D G3DSA:3.40.190.10 142 243 3.2E-19 T 28-03-2018 AM393_RS19750 b9dff939f72f53f84ca00924dc4aec1f 243 SMART SM00079 22 243 3.0E-5 T 28-03-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 AM393_RS19750 b9dff939f72f53f84ca00924dc4aec1f 243 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 3 241 3.9E-92 T 28-03-2018 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter GO:0006810|GO:0030288 AM393_RS19750 b9dff939f72f53f84ca00924dc4aec1f 243 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 23 242 1.4E-70 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM393_RS19750 b9dff939f72f53f84ca00924dc4aec1f 243 Gene3D G3DSA:3.40.190.10 14 141 9.5E-37 T 28-03-2018 AM393_RS19750 b9dff939f72f53f84ca00924dc4aec1f 243 SMART SM00062 22 243 6.3E-89 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM393_RS19750 b9dff939f72f53f84ca00924dc4aec1f 243 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 45 58 - T 28-03-2018 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 AM393_RS19750 b9dff939f72f53f84ca00924dc4aec1f 243 SUPERFAMILY SSF53850 1 242 2.39E-74 T 28-03-2018 AM393_RS03265 3c195dfa19e117000c19aa7da346ffa7 467 Pfam PF00171 Aldehyde dehydrogenase family 34 422 2.9E-31 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AM393_RS03265 3c195dfa19e117000c19aa7da346ffa7 467 Gene3D G3DSA:3.40.605.10 9 252 1.7E-30 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AM393_RS03265 3c195dfa19e117000c19aa7da346ffa7 467 Gene3D G3DSA:3.40.309.10 253 427 2.0E-27 T 28-03-2018 AM393_RS03265 3c195dfa19e117000c19aa7da346ffa7 467 SUPERFAMILY SSF53720 35 458 4.97E-63 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AM393_RS03265 3c195dfa19e117000c19aa7da346ffa7 467 PIRSF PIRSF036410 1 467 3.5E-212 T 28-03-2018 IPR012408 Acetaldehyde/propionaldehyde dehydrogenase, EutE/PduP-related AM393_RS28455 ba9132e8ce39dabfeb65a28d6ff2b5e5 76 SUPERFAMILY SSF89447 3 68 2.35E-12 T 28-03-2018 AM393_RS28455 ba9132e8ce39dabfeb65a28d6ff2b5e5 76 Gene3D G3DSA:2.10.260.10 1 74 6.7E-11 T 28-03-2018 AM393_RS28455 ba9132e8ce39dabfeb65a28d6ff2b5e5 76 SMART SM00966 7 48 2.1E-5 T 28-03-2018 IPR007159 SpoVT-AbrB domain GO:0003677 AM393_RS28455 ba9132e8ce39dabfeb65a28d6ff2b5e5 76 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 7 47 4.4E-10 T 28-03-2018 IPR007159 SpoVT-AbrB domain GO:0003677 AM393_RS01980 840327bfb2a4d91384e18da843b9ebcd 140 Gene3D G3DSA:3.40.50.620 3 138 5.3E-11 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM393_RS01980 840327bfb2a4d91384e18da843b9ebcd 140 Pfam PF00582 Universal stress protein family 4 136 1.3E-8 T 28-03-2018 IPR006016 UspA GO:0006950 AM393_RS01980 840327bfb2a4d91384e18da843b9ebcd 140 PIRSF PIRSF006276 1 140 5.2E-19 T 28-03-2018 IPR006015 Universal stress protein A AM393_RS01980 840327bfb2a4d91384e18da843b9ebcd 140 SUPERFAMILY SSF52402 4 136 8.37E-16 T 28-03-2018 AM393_RS20900 ae21af637a49283fc20720c4496bd64b 542 SUPERFAMILY SSF56801 3 535 1.7E-130 T 28-03-2018 AM393_RS20900 ae21af637a49283fc20720c4496bd64b 542 Gene3D G3DSA:3.30.300.30 434 538 4.7E-25 T 28-03-2018 AM393_RS20900 ae21af637a49283fc20720c4496bd64b 542 Pfam PF00501 AMP-binding enzyme 19 439 3.4E-85 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AM393_RS20900 ae21af637a49283fc20720c4496bd64b 542 Pfam PF13193 AMP-binding enzyme C-terminal domain 448 523 7.0E-13 T 28-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain AM393_RS20900 ae21af637a49283fc20720c4496bd64b 542 Gene3D G3DSA:3.40.50.980 42 187 1.3E-32 T 28-03-2018 AM393_RS20900 ae21af637a49283fc20720c4496bd64b 542 Gene3D G3DSA:3.40.50.980 188 348 3.1E-38 T 28-03-2018 AM393_RS20900 ae21af637a49283fc20720c4496bd64b 542 Gene3D G3DSA:2.30.38.10 360 433 7.6E-17 T 28-03-2018 AM393_RS20900 ae21af637a49283fc20720c4496bd64b 542 ProSitePatterns PS00455 Putative AMP-binding domain signature. 182 193 - T 28-03-2018 IPR020845 AMP-binding, conserved site AM393_RS20840 1e13b636eae3ea63d85214ca814ae182 175 Pfam PF05433 Glycine zipper 2TM domain 69 109 5.8E-12 T 28-03-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 AM393_RS14795 ecb23a09fac8e434d0f7e5bc30dfc897 334 SMART SM00354 1 73 7.4E-32 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM393_RS14795 ecb23a09fac8e434d0f7e5bc30dfc897 334 SUPERFAMILY SSF47413 2 58 9.57E-16 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM393_RS14795 ecb23a09fac8e434d0f7e5bc30dfc897 334 SUPERFAMILY SSF53822 60 314 4.71E-41 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AM393_RS14795 ecb23a09fac8e434d0f7e5bc30dfc897 334 Pfam PF00356 Bacterial regulatory proteins, lacI family 2 50 4.9E-19 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM393_RS14795 ecb23a09fac8e434d0f7e5bc30dfc897 334 TIGRFAM TIGR02417 fruct_sucro_rep: D-fructose-responsive transcription factor 2 328 1.7E-153 T 28-03-2018 IPR012781 D-fructose-responsive transcription factor GO:0003677|GO:0006355|GO:0009750 AM393_RS14795 ecb23a09fac8e434d0f7e5bc30dfc897 334 Gene3D G3DSA:1.10.260.40 1 56 7.6E-20 T 28-03-2018 AM393_RS14795 ecb23a09fac8e434d0f7e5bc30dfc897 334 Gene3D G3DSA:3.40.50.2300 57 166 9.4E-26 T 28-03-2018 AM393_RS14795 ecb23a09fac8e434d0f7e5bc30dfc897 334 Gene3D G3DSA:3.40.50.2300 167 334 3.4E-19 T 28-03-2018 AM393_RS14795 ecb23a09fac8e434d0f7e5bc30dfc897 334 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 62 312 8.2E-13 T 28-03-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain AM393_RS14795 ecb23a09fac8e434d0f7e5bc30dfc897 334 ProSitePatterns PS00356 LacI-type HTH domain signature. 3 21 - T 28-03-2018 AM393_RS16495 286eca0a615404354d89c23f507239fa 624 Pfam PF13145 PPIC-type PPIASE domain 248 369 2.2E-24 T 28-03-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 AM393_RS16495 286eca0a615404354d89c23f507239fa 624 Pfam PF13624 SurA N-terminal domain 1 165 4.2E-52 T 28-03-2018 AM393_RS16495 286eca0a615404354d89c23f507239fa 624 Gene3D G3DSA:3.10.50.40 382 496 5.7E-9 T 28-03-2018 AM393_RS16495 286eca0a615404354d89c23f507239fa 624 Gene3D G3DSA:3.10.50.40 234 381 3.1E-33 T 28-03-2018 AM393_RS16495 286eca0a615404354d89c23f507239fa 624 SUPERFAMILY SSF109998 203 240 2.75E-36 T 28-03-2018 IPR027304 Trigger factor/SurA domain AM393_RS16495 286eca0a615404354d89c23f507239fa 624 SUPERFAMILY SSF109998 40 169 2.75E-36 T 28-03-2018 IPR027304 Trigger factor/SurA domain AM393_RS16495 286eca0a615404354d89c23f507239fa 624 Gene3D G3DSA:1.10.4030.10 38 171 1.7E-24 T 28-03-2018 AM393_RS16495 286eca0a615404354d89c23f507239fa 624 Gene3D G3DSA:1.10.4030.10 179 233 0.014 T 28-03-2018 AM393_RS16495 286eca0a615404354d89c23f507239fa 624 SUPERFAMILY SSF54534 224 354 1.83E-22 T 28-03-2018 AM393_RS16495 286eca0a615404354d89c23f507239fa 624 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 295 316 - T 28-03-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 AM393_RS02730 119e1398e65cba6ecb92d4a5f73fe56b 219 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 61 181 1.8E-14 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM393_RS02730 119e1398e65cba6ecb92d4a5f73fe56b 219 SUPERFAMILY SSF56784 4 203 5.15E-46 T 28-03-2018 IPR023214 HAD-like domain AM393_RS02730 119e1398e65cba6ecb92d4a5f73fe56b 219 Gene3D G3DSA:3.40.50.1000 1 31 0.11 T 28-03-2018 IPR023214 HAD-like domain AM393_RS02730 119e1398e65cba6ecb92d4a5f73fe56b 219 Gene3D G3DSA:3.40.50.1000 74 209 7.2E-28 T 28-03-2018 IPR023214 HAD-like domain AM393_RS02730 119e1398e65cba6ecb92d4a5f73fe56b 219 Gene3D G3DSA:1.10.150.240 32 73 4.9E-16 T 28-03-2018 IPR023198 Phosphoglycolate phosphatase, domain 2 AM393_RS02730 119e1398e65cba6ecb92d4a5f73fe56b 219 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 181 6.5E-25 T 28-03-2018 IPR023214 HAD-like domain AM393_RS10225 38ceb07e6d78b01d47fa49c4070c578f 277 SUPERFAMILY SSF103481 175 276 3.4E-13 T 28-03-2018 AM393_RS10225 38ceb07e6d78b01d47fa49c4070c578f 277 Pfam PF00892 EamA-like transporter family 140 274 1.0E-12 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM393_RS10225 38ceb07e6d78b01d47fa49c4070c578f 277 SUPERFAMILY SSF103481 41 135 4.84E-12 T 28-03-2018 AM393_RS24750 6b902c459073ade2199dcf0acbeeb336 297 SUPERFAMILY SSF46785 10 110 7.49E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS24750 6b902c459073ade2199dcf0acbeeb336 297 Gene3D G3DSA:1.10.10.10 4 83 1.1E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS24750 6b902c459073ade2199dcf0acbeeb336 297 Gene3D G3DSA:3.40.190.10 86 173 2.2E-13 T 28-03-2018 AM393_RS24750 6b902c459073ade2199dcf0acbeeb336 297 Gene3D G3DSA:3.40.190.10 174 261 1.3E-25 T 28-03-2018 AM393_RS24750 6b902c459073ade2199dcf0acbeeb336 297 Pfam PF03466 LysR substrate binding domain 86 290 2.7E-40 T 28-03-2018 IPR005119 LysR, substrate-binding AM393_RS24750 6b902c459073ade2199dcf0acbeeb336 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 63 5.4E-17 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS24750 6b902c459073ade2199dcf0acbeeb336 297 SUPERFAMILY SSF53850 87 293 1.99E-41 T 28-03-2018 AM393_RS05155 a0cd3d065a705173f471396b25ea0516 225 TIGRFAM TIGR02454 ECF_T_CbiQ: cobalt ECF transporter T component CbiQ 16 216 3.7E-50 T 28-03-2018 IPR012809 Cobalt ECF transporter T component CbiQ GO:0005887|GO:0006824|GO:0043190 AM393_RS05155 a0cd3d065a705173f471396b25ea0516 225 Pfam PF02361 Cobalt transport protein 10 221 2.4E-46 T 28-03-2018 IPR003339 ABC/ECF transporter, transmembrane component AM393_RS08640 f1526088e998c3aa048f407e551ff5d3 75 SUPERFAMILY SSF50037 2 72 7.02E-17 T 28-03-2018 IPR008988 Transcriptional repressor, C-terminal AM393_RS08640 f1526088e998c3aa048f407e551ff5d3 75 Gene3D G3DSA:2.30.30.90 1 75 7.8E-14 T 28-03-2018 AM393_RS08640 f1526088e998c3aa048f407e551ff5d3 75 Pfam PF04023 FeoA domain 8 70 9.8E-8 T 28-03-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 AM393_RS08640 f1526088e998c3aa048f407e551ff5d3 75 SMART SM00899 1 72 2.3E-8 T 28-03-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 AM393_RS08140 a2285864bd56ef8ed41f5bf142c2afcf 180 Gene3D G3DSA:3.30.65.10 57 99 1.9E-16 T 28-03-2018 AM393_RS08140 a2285864bd56ef8ed41f5bf142c2afcf 180 Gene3D G3DSA:3.30.65.10 8 56 5.0E-18 T 28-03-2018 AM393_RS08140 a2285864bd56ef8ed41f5bf142c2afcf 180 Gene3D G3DSA:3.30.65.10 100 140 9.5E-13 T 28-03-2018 AM393_RS08140 a2285864bd56ef8ed41f5bf142c2afcf 180 Gene3D G3DSA:3.30.65.10 141 174 0.26 T 28-03-2018 AM393_RS08140 a2285864bd56ef8ed41f5bf142c2afcf 180 SUPERFAMILY SSF57783 60 98 2.21E-13 T 28-03-2018 AM393_RS08140 a2285864bd56ef8ed41f5bf142c2afcf 180 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 13 49 1.4E-16 T 28-03-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 AM393_RS08140 a2285864bd56ef8ed41f5bf142c2afcf 180 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 105 142 3.6E-16 T 28-03-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 AM393_RS08140 a2285864bd56ef8ed41f5bf142c2afcf 180 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 61 98 1.6E-17 T 28-03-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 AM393_RS08140 a2285864bd56ef8ed41f5bf142c2afcf 180 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 145 168 0.091 T 28-03-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 AM393_RS08140 a2285864bd56ef8ed41f5bf142c2afcf 180 SUPERFAMILY SSF57783 12 50 7.14E-14 T 28-03-2018 AM393_RS19010 647835affdbe6628962196d3f025433f 240 SUPERFAMILY SSF52540 2 224 2.88E-45 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS19010 647835affdbe6628962196d3f025433f 240 SMART SM00382 26 215 6.9E-8 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS19010 647835affdbe6628962196d3f025433f 240 Gene3D G3DSA:3.40.50.300 1 228 7.6E-43 T 28-03-2018 AM393_RS19010 647835affdbe6628962196d3f025433f 240 Pfam PF00005 ABC transporter 19 165 1.0E-21 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS28595 0f026a2bae2ff1da76c81101095279be 340 SUPERFAMILY SSF46689 4 76 3.58E-8 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS28595 0f026a2bae2ff1da76c81101095279be 340 SUPERFAMILY SSF53098 118 290 1.9E-15 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM393_RS28595 0f026a2bae2ff1da76c81101095279be 340 Gene3D G3DSA:1.10.10.60 2 30 2.0E-14 T 28-03-2018 AM393_RS28595 0f026a2bae2ff1da76c81101095279be 340 Gene3D G3DSA:3.30.420.10 114 325 4.1E-24 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM393_RS28595 0f026a2bae2ff1da76c81101095279be 340 Pfam PF13936 Helix-turn-helix domain 3 37 6.3E-9 T 28-03-2018 IPR025246 Transposase IS30-like HTH domain AM393_RS28595 0f026a2bae2ff1da76c81101095279be 340 Gene3D G3DSA:1.10.260.40 31 105 0.0017 T 28-03-2018 AM393_RS28595 0f026a2bae2ff1da76c81101095279be 340 Pfam PF00665 Integrase core domain 118 243 6.0E-27 T 28-03-2018 IPR001584 Integrase, catalytic core GO:0015074 AM393_RS04160 a828723cda5389ad08293b0238710aaf 845 Pfam PF13954 PapC N-terminal domain 38 162 2.8E-31 T 28-03-2018 IPR025885 PapC, N-terminal domain GO:0005515 AM393_RS04160 a828723cda5389ad08293b0238710aaf 845 Pfam PF00577 Outer membrane usher protein 177 749 4.7E-176 T 28-03-2018 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 AM393_RS04160 a828723cda5389ad08293b0238710aaf 845 Pfam PF13953 PapC C-terminal domain 758 818 2.1E-13 T 28-03-2018 IPR025949 PapC-like, C-terminal domain AM393_RS04160 a828723cda5389ad08293b0238710aaf 845 SUPERFAMILY SSF141729 48 154 5.1E-26 T 28-03-2018 AM393_RS04160 a828723cda5389ad08293b0238710aaf 845 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 289 299 - T 28-03-2018 IPR018030 Fimbrial membrane usher, conserved site AM393_RS28460 676d387c513c34b36083373ea7fc7017 138 SUPERFAMILY SSF88723 3 136 3.08E-30 T 28-03-2018 IPR029060 PIN domain-like AM393_RS28460 676d387c513c34b36083373ea7fc7017 138 Pfam PF01850 PIN domain 5 129 4.2E-13 T 28-03-2018 IPR002716 PIN domain AM393_RS28460 676d387c513c34b36083373ea7fc7017 138 Gene3D G3DSA:3.40.50.1010 1 138 1.7E-25 T 28-03-2018 IPR029060 PIN domain-like AM393_RS28460 676d387c513c34b36083373ea7fc7017 138 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 5 135 11.247 T 28-03-2018 IPR022907 VapC family GO:0004540 AM393_RS20210 e4596b6b646b42c7d2007eb67aef4eb3 150 Pfam PF06303 MatP N-terminal domain 2 85 2.5E-44 T 28-03-2018 IPR035087 MatP, N-terminal AM393_RS20210 e4596b6b646b42c7d2007eb67aef4eb3 150 Gene3D G3DSA:1.10.3990.20 78 139 5.7E-5 T 28-03-2018 AM393_RS20210 e4596b6b646b42c7d2007eb67aef4eb3 150 ProDom PD033720 UPF0268 YCBG DEHYDROGENASE PM0482 PBPRA1775 PLU1774 YPO1433/Y2737/YP0877 VV1664 HI1323 HD0178 1 131 8.0E-67 T 28-03-2018 IPR009390 Macrodomain Ter protein, MatP GO:0043565 AM393_RS20210 e4596b6b646b42c7d2007eb67aef4eb3 150 Hamap MF_01073 Macrodomain Ter protein [matP]. 1 148 30.715 T 28-03-2018 IPR009390 Macrodomain Ter protein, MatP GO:0043565 AM393_RS20210 e4596b6b646b42c7d2007eb67aef4eb3 150 Pfam PF17414 MatP C-terminal ribbon-helix-helix domain 88 147 4.4E-30 T 28-03-2018 IPR035375 MatP, C-terminal ribbon-helix-helix domain AM393_RS19315 f541a1b2363c7fdd0d05c1b05300bdde 299 Pfam PF13353 4Fe-4S single cluster domain 12 153 4.0E-10 T 28-03-2018 AM393_RS19315 f541a1b2363c7fdd0d05c1b05300bdde 299 TIGRFAM TIGR02494 PFLE_PFLC: glycyl-radical enzyme activating protein 2 291 1.7E-106 T 28-03-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 AM393_RS19315 f541a1b2363c7fdd0d05c1b05300bdde 299 Pfam PF04055 Radical SAM superfamily 19 229 1.3E-30 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AM393_RS19315 f541a1b2363c7fdd0d05c1b05300bdde 299 Gene3D G3DSA:3.20.20.70 4 296 3.5E-32 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM393_RS19315 f541a1b2363c7fdd0d05c1b05300bdde 299 SUPERFAMILY SSF102114 101 264 5.1E-15 T 28-03-2018 AM393_RS19315 f541a1b2363c7fdd0d05c1b05300bdde 299 PIRSF PIRSF000371 1 299 7.7E-95 T 28-03-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 AM393_RS19315 f541a1b2363c7fdd0d05c1b05300bdde 299 ProSitePatterns PS01087 Radical activating enzymes signature. 13 34 - T 28-03-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 AM393_RS16370 4841a9871bed4c1c5540d0ad5fa670e4 454 Gene3D G3DSA:1.20.1250.20 204 395 1.9E-15 T 28-03-2018 AM393_RS16370 4841a9871bed4c1c5540d0ad5fa670e4 454 SUPERFAMILY SSF103473 1 389 2.09E-62 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS16370 4841a9871bed4c1c5540d0ad5fa670e4 454 Gene3D G3DSA:1.20.1250.20 7 198 1.1E-33 T 28-03-2018 AM393_RS16370 4841a9871bed4c1c5540d0ad5fa670e4 454 Pfam PF07690 Major Facilitator Superfamily 20 354 7.2E-41 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS22140 37bfddd4748f79e2476c5d83b0430fe3 400 PIRSF PIRSF029215 1 400 5.5E-76 T 28-03-2018 IPR016913 Uncharacterised conserved protein UCP029215 AM393_RS22140 37bfddd4748f79e2476c5d83b0430fe3 400 Pfam PF09979 Uncharacterized protein conserved in bacteria (DUF2213) 17 182 1.3E-39 T 28-03-2018 IPR016913 Uncharacterised conserved protein UCP029215 AM393_RS02760 9410de43ef09eb12d4ffb329588cb859 183 SUPERFAMILY SSF56300 1 164 1.46E-37 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like AM393_RS02760 9410de43ef09eb12d4ffb329588cb859 183 Gene3D G3DSA:3.60.21.10 1 183 6.3E-28 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like AM393_RS02760 9410de43ef09eb12d4ffb329588cb859 183 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 1 167 9.3E-40 T 28-03-2018 IPR000979 Phosphodiesterase MJ0936/Vps29 Reactome: R-HSA-3238698 AM393_RS02760 9410de43ef09eb12d4ffb329588cb859 183 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 1 161 2.2E-24 T 28-03-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 AM393_RS02760 9410de43ef09eb12d4ffb329588cb859 183 ProSitePatterns PS01269 Uncharacterized protein family UPF0025 signature. 120 144 - T 28-03-2018 IPR020935 Phosphodiesterase YfcE, conserved site AM393_RS02645 bdfffd36fb250f03f95aeec8bf41b022 509 Pfam PF00361 Proton-conducting membrane transporter 134 430 2.7E-69 T 28-03-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM393_RS02645 bdfffd36fb250f03f95aeec8bf41b022 509 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 3 499 6.3E-182 T 28-03-2018 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM393_RS02645 bdfffd36fb250f03f95aeec8bf41b022 509 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 337 356 5.7E-37 T 28-03-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM393_RS02645 bdfffd36fb250f03f95aeec8bf41b022 509 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 249 273 5.7E-37 T 28-03-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM393_RS02645 bdfffd36fb250f03f95aeec8bf41b022 509 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 389 415 5.7E-37 T 28-03-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM393_RS02645 bdfffd36fb250f03f95aeec8bf41b022 509 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 139 158 5.7E-37 T 28-03-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM393_RS02645 bdfffd36fb250f03f95aeec8bf41b022 509 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 174 198 5.7E-37 T 28-03-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM393_RS25360 f757285bdcba1cdaf2865c1ed54f9160 333 Gene3D G3DSA:3.20.20.140 3 333 2.6E-75 T 28-03-2018 AM393_RS25360 f757285bdcba1cdaf2865c1ed54f9160 333 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 6 330 7.6E-111 T 28-03-2018 IPR006330 Adenosine/adenine deaminase GO:0019239 Reactome: R-HSA-74217 AM393_RS25360 f757285bdcba1cdaf2865c1ed54f9160 333 Pfam PF00962 Adenosine/AMP deaminase 6 328 1.1E-100 T 28-03-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 AM393_RS25360 f757285bdcba1cdaf2865c1ed54f9160 333 SUPERFAMILY SSF51556 5 326 1.7E-77 T 28-03-2018 IPR032466 Metal-dependent hydrolase AM393_RS25360 f757285bdcba1cdaf2865c1ed54f9160 333 ProSitePatterns PS00485 Adenosine and AMP deaminase signature. 274 280 - T 28-03-2018 IPR006650 Adenosine/AMP deaminase active site GO:0009168|GO:0019239 Reactome: R-HSA-74217 AM393_RS25360 f757285bdcba1cdaf2865c1ed54f9160 333 Hamap MF_00540 Adenosine deaminase [add]. 1 331 52.84 T 28-03-2018 IPR028893 Adenosine deaminase GO:0004000|GO:0009168 KEGG: 00230+3.5.4.4|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-74217 AM393_RS10255 32f4afbd5cd9227ffd6dee8f0cc7e070 120 ProDom PD277113 MEMBRANE INNER YIDG TRANSMEMBRANE STY3975 RV2273/MT2334 MB2296 12 71 2.0E-24 T 28-03-2018 IPR020264 Uncharacterised protein family YidG AM393_RS10255 32f4afbd5cd9227ffd6dee8f0cc7e070 120 Pfam PF02656 Domain of unknown function (DUF202) 12 73 6.0E-12 T 28-03-2018 IPR003807 Domain of unknown function DUF202 AM393_RS13880 66587b92622d2f011abb5c75dc79e6b0 170 Gene3D G3DSA:2.30.110.10 4 162 2.0E-34 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 AM393_RS13880 66587b92622d2f011abb5c75dc79e6b0 170 Pfam PF01613 Flavin reductase like domain 14 162 1.4E-26 T 28-03-2018 IPR002563 Flavin reductase like domain GO:0010181 AM393_RS13880 66587b92622d2f011abb5c75dc79e6b0 170 TIGRFAM TIGR02296 HpaC: 4-hydroxyphenylacetate 3-monooxygenase, reductase component 10 163 1.8E-78 T 28-03-2018 IPR011982 4-hydroxyphenylacetate 3-monooxygenase, reductase component GO:0016651|GO:0042537|GO:0051287|GO:0055114 KEGG: 00740+1.5.1.36 AM393_RS13880 66587b92622d2f011abb5c75dc79e6b0 170 SMART SM00903 14 161 3.0E-49 T 28-03-2018 IPR002563 Flavin reductase like domain GO:0010181 AM393_RS13880 66587b92622d2f011abb5c75dc79e6b0 170 SUPERFAMILY SSF50475 9 162 2.89E-47 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 AM393_RS17250 b8ff3eb823cb68da0b25b8b75ab9bfe2 243 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 107 225 8.6E-8 T 28-03-2018 AM393_RS17250 b8ff3eb823cb68da0b25b8b75ab9bfe2 243 SUPERFAMILY SSF49899 64 227 1.77E-9 T 28-03-2018 IPR013320 Concanavalin A-like lectin/glucanase domain AM393_RS17250 b8ff3eb823cb68da0b25b8b75ab9bfe2 243 Gene3D G3DSA:2.60.120.200 66 236 2.6E-10 T 28-03-2018 AM393_RS24315 7f26400f8cb4ee172c6c42603fc10411 528 Pfam PF01019 Gamma-glutamyltranspeptidase 25 523 2.8E-129 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AM393_RS24315 7f26400f8cb4ee172c6c42603fc10411 528 SUPERFAMILY SSF56235 5 528 7.72E-151 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AM393_RS24315 7f26400f8cb4ee172c6c42603fc10411 528 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 366 384 5.3E-22 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AM393_RS24315 7f26400f8cb4ee172c6c42603fc10411 528 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 222 238 5.3E-22 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AM393_RS24315 7f26400f8cb4ee172c6c42603fc10411 528 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 397 412 5.3E-22 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AM393_RS24315 7f26400f8cb4ee172c6c42603fc10411 528 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 32 57 5.3E-22 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AM393_RS24315 7f26400f8cb4ee172c6c42603fc10411 528 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 342 360 5.3E-22 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AM393_RS24315 7f26400f8cb4ee172c6c42603fc10411 528 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 251 270 5.3E-22 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AM393_RS24315 7f26400f8cb4ee172c6c42603fc10411 528 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 124 143 5.3E-22 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AM393_RS25790 0cd88f3409dc8b1093ef4532085ca332 276 SUPERFAMILY SSF52540 26 247 1.3E-63 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS25790 0cd88f3409dc8b1093ef4532085ca332 276 SMART SM00382 49 231 4.7E-13 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS25790 0cd88f3409dc8b1093ef4532085ca332 276 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS25790 0cd88f3409dc8b1093ef4532085ca332 276 Gene3D G3DSA:3.40.50.300 19 265 5.7E-56 T 28-03-2018 AM393_RS25790 0cd88f3409dc8b1093ef4532085ca332 276 Pfam PF00005 ABC transporter 42 180 3.7E-31 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS19075 ee9e90ccae1cf55a93bd246303fc31b0 82 Pfam PF02597 ThiS family 4 82 1.7E-20 T 28-03-2018 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 Reactome: R-HSA-947581 AM393_RS19075 ee9e90ccae1cf55a93bd246303fc31b0 82 SUPERFAMILY SSF54285 1 82 7.48E-23 T 28-03-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp AM393_RS19075 ee9e90ccae1cf55a93bd246303fc31b0 82 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 2 82 3.2E-24 T 28-03-2018 IPR010034 Molybdopterin converting factor, subunit 1 GO:0006777 Reactome: R-HSA-947581 AM393_RS19075 ee9e90ccae1cf55a93bd246303fc31b0 82 Gene3D G3DSA:3.10.20.30 2 82 1.3E-20 T 28-03-2018 IPR012675 Beta-grasp domain AM393_RS05420 b632b15bd92a21cc75b55e49b585f871 176 PRINTS PR00502 NUDIX hydrolase family signature 33 47 2.5E-7 T 28-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AM393_RS05420 b632b15bd92a21cc75b55e49b585f871 176 PRINTS PR00502 NUDIX hydrolase family signature 47 62 2.5E-7 T 28-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AM393_RS05420 b632b15bd92a21cc75b55e49b585f871 176 SUPERFAMILY SSF55811 5 157 4.6E-32 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 AM393_RS05420 b632b15bd92a21cc75b55e49b585f871 176 Pfam PF00293 NUDIX domain 7 146 7.7E-27 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AM393_RS05420 b632b15bd92a21cc75b55e49b585f871 176 Gene3D G3DSA:3.90.79.10 1 164 6.8E-35 T 28-03-2018 AM393_RS05420 b632b15bd92a21cc75b55e49b585f871 176 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 28-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AM393_RS05420 b632b15bd92a21cc75b55e49b585f871 176 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 156 38.215 T 28-03-2018 IPR022927 RNA pyrophosphohydrolase RppH AM393_RS05190 1f7e221a46c3e96a5901cf388ec8dc22 351 Pfam PF11760 Cobalamin synthesis G N-terminal 55 134 5.5E-34 T 28-03-2018 IPR021744 Cobalamin synthesis G, N-terminal KEGG: 00860+3.7.1.12|MetaCyc: PWY-7377 AM393_RS05190 1f7e221a46c3e96a5901cf388ec8dc22 351 Pfam PF01890 Cobalamin synthesis G C-terminus 231 346 2.6E-23 T 28-03-2018 IPR002750 CobE/GbiG C-terminal domain GO:0009236 AM393_RS05190 1f7e221a46c3e96a5901cf388ec8dc22 351 SUPERFAMILY SSF159672 6 238 8.11E-59 T 28-03-2018 AM393_RS05190 1f7e221a46c3e96a5901cf388ec8dc22 351 SUPERFAMILY SSF159664 224 349 1.7E-30 T 28-03-2018 IPR002750 CobE/GbiG C-terminal domain GO:0009236 AM393_RS05190 1f7e221a46c3e96a5901cf388ec8dc22 351 Gene3D G3DSA:3.30.420.180 221 351 3.4E-27 T 28-03-2018 IPR002750 CobE/GbiG C-terminal domain GO:0009236 AM393_RS05190 1f7e221a46c3e96a5901cf388ec8dc22 351 Pfam PF11761 Cobalamin biosynthesis central region 140 216 1.9E-8 T 28-03-2018 IPR021745 Cobalamin biosynthesis central region KEGG: 00860+3.7.1.12|MetaCyc: PWY-7377 AM393_RS05950 4b2e1a1ec8a35ef3d106f9e0cae8b400 392 Gene3D G3DSA:3.50.50.60 2 352 9.4E-38 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS05950 4b2e1a1ec8a35ef3d106f9e0cae8b400 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 293 309 4.1E-14 T 28-03-2018 AM393_RS05950 4b2e1a1ec8a35ef3d106f9e0cae8b400 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 278 293 4.1E-14 T 28-03-2018 AM393_RS05950 4b2e1a1ec8a35ef3d106f9e0cae8b400 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 2 24 4.1E-14 T 28-03-2018 AM393_RS05950 4b2e1a1ec8a35ef3d106f9e0cae8b400 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 154 169 4.1E-14 T 28-03-2018 AM393_RS05950 4b2e1a1ec8a35ef3d106f9e0cae8b400 392 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 3 387 6.0E-134 T 28-03-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 AM393_RS05950 4b2e1a1ec8a35ef3d106f9e0cae8b400 392 Pfam PF01494 FAD binding domain 2 336 2.8E-26 T 28-03-2018 IPR002938 FAD-binding domain GO:0071949 AM393_RS05950 4b2e1a1ec8a35ef3d106f9e0cae8b400 392 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 292 305 - T 28-03-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 AM393_RS05950 4b2e1a1ec8a35ef3d106f9e0cae8b400 392 TIGRFAM TIGR01984 UbiH: 2-polyprenyl-6-methoxyphenol 4-hydroxylase 3 388 3.8E-143 T 28-03-2018 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase GO:0006744|GO:0008681 AM393_RS05950 4b2e1a1ec8a35ef3d106f9e0cae8b400 392 SUPERFAMILY SSF51905 2 175 1.6E-52 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS05950 4b2e1a1ec8a35ef3d106f9e0cae8b400 392 SUPERFAMILY SSF51905 265 380 1.6E-52 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS04560 ed320dc3a50e3e1799725341d589f5ee 307 ProSitePatterns PS00667 Respiratory-chain NADH dehydrogenase subunit 1 signature 1. 38 53 - T 28-03-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM393_RS04560 ed320dc3a50e3e1799725341d589f5ee 307 Pfam PF00146 NADH dehydrogenase 7 301 7.1E-47 T 28-03-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM393_RS04560 ed320dc3a50e3e1799725341d589f5ee 307 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 194 207 - T 28-03-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM393_RS17525 91279f1655ab152548d744f6e88467ee 263 Pfam PF17409 MoaF C-terminal domain 148 259 3.7E-49 T 28-03-2018 IPR035348 MoaF, C-terminal domain AM393_RS17525 91279f1655ab152548d744f6e88467ee 263 Gene3D G3DSA:2.40.128.20 31 118 4.7E-6 T 28-03-2018 IPR012674 Calycin AM393_RS17525 91279f1655ab152548d744f6e88467ee 263 Gene3D G3DSA:2.40.128.20 150 243 5.7E-22 T 28-03-2018 IPR012674 Calycin AM393_RS17525 91279f1655ab152548d744f6e88467ee 263 Pfam PF10703 MoaF N-terminal domain 6 108 1.1E-18 T 28-03-2018 IPR024724 Molybdenum cofactor biosynthesis protein F, N-terminal AM393_RS19025 d512842bccbd580bc1d48896368bc014 673 Pfam PF02151 UvrB/uvrC motif 634 667 7.8E-7 T 28-03-2018 IPR001943 UVR domain GO:0005515 AM393_RS19025 d512842bccbd580bc1d48896368bc014 673 SMART SM00487 9 425 1.7E-27 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AM393_RS19025 d512842bccbd580bc1d48896368bc014 673 Gene3D G3DSA:3.40.50.300 10 410 4.3E-33 T 28-03-2018 AM393_RS19025 d512842bccbd580bc1d48896368bc014 673 Gene3D G3DSA:3.40.50.300 415 589 2.1E-31 T 28-03-2018 AM393_RS19025 d512842bccbd580bc1d48896368bc014 673 Hamap MF_00204 UvrABC system protein B [uvrB]. 3 668 44.18 T 28-03-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 AM393_RS19025 d512842bccbd580bc1d48896368bc014 673 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 5 666 0.0 T 28-03-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 AM393_RS19025 d512842bccbd580bc1d48896368bc014 673 SUPERFAMILY SSF46600 625 669 2.48E-12 T 28-03-2018 IPR001943 UVR domain GO:0005515 AM393_RS19025 d512842bccbd580bc1d48896368bc014 673 Pfam PF12344 Ultra-violet resistance protein B 552 593 5.5E-21 T 28-03-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain AM393_RS19025 d512842bccbd580bc1d48896368bc014 673 Pfam PF00271 Helicase conserved C-terminal domain 441 544 3.3E-17 T 28-03-2018 IPR001650 Helicase, C-terminal AM393_RS19025 d512842bccbd580bc1d48896368bc014 673 Pfam PF04851 Type III restriction enzyme, res subunit 16 92 2.6E-9 T 28-03-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 AM393_RS19025 d512842bccbd580bc1d48896368bc014 673 SUPERFAMILY SSF52540 5 415 3.51E-137 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS19025 d512842bccbd580bc1d48896368bc014 673 SUPERFAMILY SSF52540 459 584 9.32E-36 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS19025 d512842bccbd580bc1d48896368bc014 673 SUPERFAMILY SSF52540 37 82 9.32E-36 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS19025 d512842bccbd580bc1d48896368bc014 673 SMART SM00490 460 546 3.8E-20 T 28-03-2018 IPR001650 Helicase, C-terminal AM393_RS19025 d512842bccbd580bc1d48896368bc014 673 Gene3D G3DSA:4.10.860.10 609 673 4.6E-17 T 28-03-2018 IPR001943 UVR domain GO:0005515 AM393_RS11215 2f034797016d5fa1f8f1a701188cc177 514 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 15 512 2.8E-267 T 28-03-2018 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 AM393_RS11215 2f034797016d5fa1f8f1a701188cc177 514 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 53 66 - T 28-03-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 AM393_RS11215 2f034797016d5fa1f8f1a701188cc177 514 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 28 316 1.0E-78 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AM393_RS11215 2f034797016d5fa1f8f1a701188cc177 514 SUPERFAMILY SSF55021 420 512 1.21E-25 T 28-03-2018 AM393_RS11215 2f034797016d5fa1f8f1a701188cc177 514 SUPERFAMILY SSF53686 14 365 2.23E-102 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AM393_RS11215 2f034797016d5fa1f8f1a701188cc177 514 Gene3D G3DSA:3.40.50.1100 149 330 8.5E-46 T 28-03-2018 AM393_RS11215 2f034797016d5fa1f8f1a701188cc177 514 Gene3D G3DSA:3.40.50.1100 37 148 4.2E-31 T 28-03-2018 AM393_RS11215 2f034797016d5fa1f8f1a701188cc177 514 Gene3D G3DSA:3.40.1020.10 338 513 5.6E-72 T 28-03-2018 AM393_RS11215 2f034797016d5fa1f8f1a701188cc177 514 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 425 512 4.3E-28 T 28-03-2018 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 AM393_RS11215 2f034797016d5fa1f8f1a701188cc177 514 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 329 419 2.3E-28 T 28-03-2018 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 AM393_RS11215 2f034797016d5fa1f8f1a701188cc177 514 SUPERFAMILY SSF55021 336 423 5.04E-28 T 28-03-2018 AM393_RS24915 af2dfea68c0200f6010c857b99ab10e7 499 Gene3D G3DSA:1.20.1250.20 253 498 2.1E-18 T 28-03-2018 AM393_RS24915 af2dfea68c0200f6010c857b99ab10e7 499 Pfam PF07690 Major Facilitator Superfamily 11 403 1.8E-39 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS24915 af2dfea68c0200f6010c857b99ab10e7 499 PRINTS PR01036 Tetracycline resistance protein TetB signature 5 29 5.8E-5 T 28-03-2018 AM393_RS24915 af2dfea68c0200f6010c857b99ab10e7 499 PRINTS PR01036 Tetracycline resistance protein TetB signature 132 156 5.8E-5 T 28-03-2018 AM393_RS24915 af2dfea68c0200f6010c857b99ab10e7 499 PRINTS PR01036 Tetracycline resistance protein TetB signature 394 413 5.8E-5 T 28-03-2018 AM393_RS24915 af2dfea68c0200f6010c857b99ab10e7 499 PRINTS PR01036 Tetracycline resistance protein TetB signature 296 320 5.8E-5 T 28-03-2018 AM393_RS24915 af2dfea68c0200f6010c857b99ab10e7 499 SUPERFAMILY SSF103473 2 191 4.8E-50 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS24915 af2dfea68c0200f6010c857b99ab10e7 499 SUPERFAMILY SSF103473 242 426 4.8E-50 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS24915 af2dfea68c0200f6010c857b99ab10e7 499 Gene3D G3DSA:1.20.1250.20 3 196 1.2E-23 T 28-03-2018 AM393_RS12405 80ab1129e71ca14df2b50a07d47db972 226 Pfam PF00005 ABC transporter 25 178 1.1E-29 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS12405 80ab1129e71ca14df2b50a07d47db972 226 SUPERFAMILY SSF52540 2 222 1.73E-45 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS12405 80ab1129e71ca14df2b50a07d47db972 226 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS12405 80ab1129e71ca14df2b50a07d47db972 226 Gene3D G3DSA:3.40.50.300 1 223 1.0E-45 T 28-03-2018 AM393_RS12405 80ab1129e71ca14df2b50a07d47db972 226 TIGRFAM TIGR02324 CP_lyasePhnL: phosphonate C-P lyase system protein PhnL 1 219 1.8E-108 T 28-03-2018 IPR012701 Phosphonate C-P lyase system, PhnL KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 AM393_RS12405 80ab1129e71ca14df2b50a07d47db972 226 SMART SM00382 33 216 2.2E-6 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS20615 7ca1c04e3edb6b243ec1a4759db5d703 75 Pfam PF07119 Protein of unknown function (DUF1375) 8 69 3.8E-10 T 28-03-2018 IPR010780 Protein of unknown function DUF1375 AM393_RS05395 f30f7a6c0719373353d5e138eca74778 185 PIRSF PIRSF004525 1 185 2.4E-52 T 28-03-2018 IPR016419 Prepilin peptidase-dependent protein B, predicted AM393_RS05395 f30f7a6c0719373353d5e138eca74778 185 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 3 25 1.0E-4 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site AM393_RS05395 f30f7a6c0719373353d5e138eca74778 185 Pfam PF07963 Prokaryotic N-terminal methylation motif 3 25 3.6E-6 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site AM393_RS15470 cca517bc9b533bf5508232caecb062cb 217 Gene3D G3DSA:1.10.3720.10 1 217 4.8E-39 T 28-03-2018 AM393_RS15470 cca517bc9b533bf5508232caecb062cb 217 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 31 214 1.3E-20 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS15470 cca517bc9b533bf5508232caecb062cb 217 SUPERFAMILY SSF161098 9 201 1.26E-47 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS09980 a2c3f9002aa4e12882dba93246e8ca42 156 SUPERFAMILY SSF54427 3 156 3.1E-80 T 28-03-2018 IPR032710 NTF2-like domain AM393_RS09980 a2c3f9002aa4e12882dba93246e8ca42 156 Gene3D G3DSA:3.10.450.50 12 156 2.9E-70 T 28-03-2018 AM393_RS09980 a2c3f9002aa4e12882dba93246e8ca42 156 Pfam PF07080 Protein of unknown function (DUF1348) 9 138 6.3E-66 T 28-03-2018 IPR009783 Protein of unknown function DUF1348 AM393_RS12080 0b50cac1a144b0567739700380dfcba4 171 Pfam PF01475 Ferric uptake regulator family 20 138 2.9E-15 T 28-03-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 AM393_RS12080 0b50cac1a144b0567739700380dfcba4 171 Gene3D G3DSA:1.10.10.10 1 92 6.8E-27 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS12080 0b50cac1a144b0567739700380dfcba4 171 SUPERFAMILY SSF46785 13 144 2.94E-33 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS19215 c810f59de30e3f6870454eaec59be6cb 248 SMART SM00079 26 245 2.3E-7 T 28-03-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 AM393_RS19215 c810f59de30e3f6870454eaec59be6cb 248 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 27 244 8.2E-71 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM393_RS19215 c810f59de30e3f6870454eaec59be6cb 248 SMART SM00062 26 246 7.2E-74 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM393_RS19215 c810f59de30e3f6870454eaec59be6cb 248 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 48 61 - T 28-03-2018 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 AM393_RS19215 c810f59de30e3f6870454eaec59be6cb 248 Gene3D G3DSA:3.40.190.10 14 147 2.4E-39 T 28-03-2018 AM393_RS19215 c810f59de30e3f6870454eaec59be6cb 248 SUPERFAMILY SSF53850 8 245 3.75E-75 T 28-03-2018 AM393_RS19215 c810f59de30e3f6870454eaec59be6cb 248 Gene3D G3DSA:3.40.190.10 148 248 3.9E-18 T 28-03-2018 AM393_RS13785 a329e43f564a26e9f5dd0bdf55107c9c 355 Gene3D G3DSA:2.40.50.100 192 296 0.18 T 28-03-2018 AM393_RS13785 a329e43f564a26e9f5dd0bdf55107c9c 355 Pfam PF13533 Biotin-lipoyl like 45 89 5.0E-11 T 28-03-2018 AM393_RS13785 a329e43f564a26e9f5dd0bdf55107c9c 355 SUPERFAMILY SSF111369 45 145 1.96E-14 T 28-03-2018 AM393_RS13785 a329e43f564a26e9f5dd0bdf55107c9c 355 SUPERFAMILY SSF111369 178 249 1.96E-14 T 28-03-2018 AM393_RS13785 a329e43f564a26e9f5dd0bdf55107c9c 355 Gene3D G3DSA:2.40.50.100 45 114 8.0E-14 T 28-03-2018 AM393_RS13785 a329e43f564a26e9f5dd0bdf55107c9c 355 Gene3D G3DSA:1.10.287.470 115 166 1.5E-7 T 28-03-2018 AM393_RS11005 196e858f33458cf1d1573dd5fe52d6b5 105 SUPERFAMILY SSF47598 2 105 5.11E-58 T 28-03-2018 IPR010985 Ribbon-helix-helix GO:0006355 AM393_RS11005 196e858f33458cf1d1573dd5fe52d6b5 105 ProDom PD020365 REPRESSOR MET BIOSYNTHESIS TRANSCRIPTION METJ METHIONINE REGULON DNA-BINDING REGULATORY AMINO-ACID 10 101 5.0E-48 T 28-03-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 AM393_RS11005 196e858f33458cf1d1573dd5fe52d6b5 105 Pfam PF01340 Met Apo-repressor, MetJ 3 99 1.5E-58 T 28-03-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 AM393_RS11005 196e858f33458cf1d1573dd5fe52d6b5 105 Hamap MF_00744 Met repressor [metJ]. 1 105 40.959 T 28-03-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 AM393_RS11005 196e858f33458cf1d1573dd5fe52d6b5 105 Gene3D G3DSA:1.10.140.10 3 103 2.6E-59 T 28-03-2018 IPR023453 Methionine repressor MetJ domain AM393_RS26230 1111a1ced8169dd10d4e5460185fea5f 249 SUPERFAMILY SSF52540 11 218 2.4E-44 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS26230 1111a1ced8169dd10d4e5460185fea5f 249 Pfam PF00005 ABC transporter 22 154 9.2E-22 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS26230 1111a1ced8169dd10d4e5460185fea5f 249 ProSitePatterns PS00211 ABC transporters family signature. 127 141 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS26230 1111a1ced8169dd10d4e5460185fea5f 249 SMART SM00382 28 203 4.5E-7 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS26230 1111a1ced8169dd10d4e5460185fea5f 249 Gene3D G3DSA:3.40.50.300 1 226 2.5E-45 T 28-03-2018 AM393_RS00970 7a95781c0c2018c6e4bb947dacd24b7b 235 SMART SM00471 22 141 9.9E-10 T 28-03-2018 IPR003607 HD/PDEase domain AM393_RS00970 7a95781c0c2018c6e4bb947dacd24b7b 235 SUPERFAMILY SSF109604 1 215 2.86E-61 T 28-03-2018 AM393_RS00970 7a95781c0c2018c6e4bb947dacd24b7b 235 Gene3D G3DSA:1.10.3210.10 4 215 6.9E-19 T 28-03-2018 AM393_RS00970 7a95781c0c2018c6e4bb947dacd24b7b 235 Pfam PF01966 HD domain 28 130 1.1E-12 T 28-03-2018 IPR006674 HD domain AM393_RS27470 764b4aeb1d95588ea1371d705cdb674f 226 Gene3D G3DSA:1.10.10.10 122 226 1.3E-27 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS27470 764b4aeb1d95588ea1371d705cdb674f 226 Gene3D G3DSA:3.40.50.2300 1 121 9.2E-33 T 28-03-2018 AM393_RS27470 764b4aeb1d95588ea1371d705cdb674f 226 SMART SM00448 2 113 4.5E-40 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM393_RS27470 764b4aeb1d95588ea1371d705cdb674f 226 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 221 1.9E-24 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM393_RS27470 764b4aeb1d95588ea1371d705cdb674f 226 Pfam PF00072 Response regulator receiver domain 4 114 4.9E-26 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM393_RS27470 764b4aeb1d95588ea1371d705cdb674f 226 SMART SM00862 146 221 2.0E-23 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM393_RS27470 764b4aeb1d95588ea1371d705cdb674f 226 SUPERFAMILY SSF52172 1 175 4.07E-39 T 28-03-2018 IPR011006 CheY-like superfamily AM393_RS27470 764b4aeb1d95588ea1371d705cdb674f 226 TIGRFAM TIGR01387 cztR_silR_copR: heavy metal response regulator 4 221 1.2E-118 T 28-03-2018 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response GO:0003677|GO:0006355 AM393_RS09655 590a6b1e1ca802d9abc73914aa8724a1 358 Gene3D G3DSA:3.40.50.2000 177 358 1.2E-42 T 28-03-2018 AM393_RS09655 590a6b1e1ca802d9abc73914aa8724a1 358 Gene3D G3DSA:3.40.50.2000 14 173 1.4E-38 T 28-03-2018 AM393_RS09655 590a6b1e1ca802d9abc73914aa8724a1 358 SUPERFAMILY SSF53756 15 358 1.73E-87 T 28-03-2018 AM393_RS09655 590a6b1e1ca802d9abc73914aa8724a1 358 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 87 328 2.2E-53 T 28-03-2018 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 AM393_RS09655 590a6b1e1ca802d9abc73914aa8724a1 358 TIGRFAM TIGR02201 heptsyl_trn_III: putative lipopolysaccharide heptosyltransferase III 15 358 5.0E-194 T 28-03-2018 IPR011916 Lipopolysaccharide heptosyltransferase III, putative AM393_RS14860 00c6c7597efac18fbfcb70d64e51a979 306 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 248 276 - T 28-03-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM393_RS14860 00c6c7597efac18fbfcb70d64e51a979 306 Gene3D G3DSA:3.30.1490.20 97 171 5.0E-18 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AM393_RS14860 00c6c7597efac18fbfcb70d64e51a979 306 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 3 306 35.399 T 28-03-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM393_RS14860 00c6c7597efac18fbfcb70d64e51a979 306 Gene3D G3DSA:3.30.470.20 172 306 3.8E-36 T 28-03-2018 AM393_RS14860 00c6c7597efac18fbfcb70d64e51a979 306 SUPERFAMILY SSF52440 3 96 9.02E-29 T 28-03-2018 IPR016185 Pre-ATP-grasp domain AM393_RS14860 00c6c7597efac18fbfcb70d64e51a979 306 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 63 74 - T 28-03-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM393_RS14860 00c6c7597efac18fbfcb70d64e51a979 306 Pfam PF01820 D-ala D-ala ligase N-terminus 4 86 9.1E-18 T 28-03-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM393_RS14860 00c6c7597efac18fbfcb70d64e51a979 306 SUPERFAMILY SSF56059 97 302 9.43E-56 T 28-03-2018 AM393_RS14860 00c6c7597efac18fbfcb70d64e51a979 306 Pfam PF07478 D-ala D-ala ligase C-terminus 103 302 1.1E-66 T 28-03-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM393_RS14860 00c6c7597efac18fbfcb70d64e51a979 306 Gene3D G3DSA:3.40.50.20 1 96 6.2E-31 T 28-03-2018 AM393_RS14860 00c6c7597efac18fbfcb70d64e51a979 306 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 4 305 8.6E-105 T 28-03-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM393_RS14860 00c6c7597efac18fbfcb70d64e51a979 306 PIRSF PIRSF039102 1 45 3.4E-8 T 28-03-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM393_RS14860 00c6c7597efac18fbfcb70d64e51a979 306 PIRSF PIRSF039102 35 306 2.9E-92 T 28-03-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM393_RS09135 7f99c01da0f2e01278d026c02de3e14c 440 SUPERFAMILY SSF103473 19 439 9.16E-63 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS09135 7f99c01da0f2e01278d026c02de3e14c 440 Pfam PF00083 Sugar (and other) transporter 24 226 9.8E-23 T 28-03-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 AM393_RS09135 7f99c01da0f2e01278d026c02de3e14c 440 ProSitePatterns PS00216 Sugar transport proteins signature 1. 308 325 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM393_RS09135 7f99c01da0f2e01278d026c02de3e14c 440 TIGRFAM TIGR00883 2A0106: MFS transporter, metabolite:H+ symporter (MHS) family protein 30 426 6.7E-149 T 28-03-2018 IPR004736 Citrate-proton symport GO:0005215|GO:0006810|GO:0016021 AM393_RS09135 7f99c01da0f2e01278d026c02de3e14c 440 Pfam PF07690 Major Facilitator Superfamily 267 434 2.3E-12 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS09135 7f99c01da0f2e01278d026c02de3e14c 440 Gene3D G3DSA:1.20.1250.20 19 234 8.5E-24 T 28-03-2018 AM393_RS09135 7f99c01da0f2e01278d026c02de3e14c 440 Gene3D G3DSA:1.20.1250.20 235 438 2.0E-20 T 28-03-2018 AM393_RS26815 f63d8fc621fa4c149398055dd67138ef 270 Gene3D G3DSA:1.25.40.120 166 261 1.1E-4 T 28-03-2018 AM393_RS26815 f63d8fc621fa4c149398055dd67138ef 270 Pfam PF13371 Tetratricopeptide repeat 188 260 1.8E-25 T 28-03-2018 AM393_RS26815 f63d8fc621fa4c149398055dd67138ef 270 Pfam PF13369 Transglutaminase-like superfamily 34 185 1.3E-39 T 28-03-2018 IPR032698 Protein SirB1, N-terminal Reactome: R-HSA-8951664|Reactome: R-HSA-983168 AM393_RS02080 220f57656d84d3e64c8d20b5fbe90daa 315 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 30 261 3.0E-83 T 28-03-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 AM393_RS02080 220f57656d84d3e64c8d20b5fbe90daa 315 Gene3D G3DSA:3.40.710.10 17 312 3.3E-43 T 28-03-2018 AM393_RS02080 220f57656d84d3e64c8d20b5fbe90daa 315 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 66 77 3.3E-13 T 28-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AM393_RS02080 220f57656d84d3e64c8d20b5fbe90daa 315 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 143 156 3.3E-13 T 28-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AM393_RS02080 220f57656d84d3e64c8d20b5fbe90daa 315 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 116 133 3.3E-13 T 28-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AM393_RS02080 220f57656d84d3e64c8d20b5fbe90daa 315 SUPERFAMILY SSF56601 5 277 7.36E-61 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AM393_RS13435 6b20a642c0ef778d9f8429cc4edbd197 226 Gene3D G3DSA:3.40.1050.10 2 225 3.0E-59 T 28-03-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AM393_RS13435 6b20a642c0ef778d9f8429cc4edbd197 226 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 42 49 - T 28-03-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AM393_RS13435 6b20a642c0ef778d9f8429cc4edbd197 226 SMART SM00947 30 216 2.9E-55 T 28-03-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AM393_RS13435 6b20a642c0ef778d9f8429cc4edbd197 226 SUPERFAMILY SSF53056 3 215 1.7E-53 T 28-03-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AM393_RS13435 6b20a642c0ef778d9f8429cc4edbd197 226 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 82 102 - T 28-03-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AM393_RS13435 6b20a642c0ef778d9f8429cc4edbd197 226 Pfam PF00484 Carbonic anhydrase 38 211 1.4E-42 T 28-03-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AM393_RS25310 30a3b6ea34bda9094aaa42bdb07ce653 206 ProSitePatterns PS00083 Intradiol ring-cleavage dioxygenases signature. 51 79 - T 28-03-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 AM393_RS25310 30a3b6ea34bda9094aaa42bdb07ce653 206 Gene3D G3DSA:2.60.130.10 2 206 5.1E-56 T 28-03-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 AM393_RS25310 30a3b6ea34bda9094aaa42bdb07ce653 206 SUPERFAMILY SSF49482 3 206 3.27E-66 T 28-03-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 AM393_RS25310 30a3b6ea34bda9094aaa42bdb07ce653 206 TIGRFAM TIGR02423 protocat_alph: protocatechuate 3,4-dioxygenase, alpha subunit 8 206 9.3E-80 T 28-03-2018 IPR012786 Protocatechuate 3,4-dioxygenase, alpha subunit GO:0005506|GO:0018578|GO:0019439|GO:0055114 KEGG: 00362+1.13.11.3|KEGG: 00624+1.13.11.3 AM393_RS25310 30a3b6ea34bda9094aaa42bdb07ce653 206 Pfam PF00775 Dioxygenase 43 196 3.4E-19 T 28-03-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 AM393_RS01740 060a203250168500cd978e3e690ecb84 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 66 95 1.5E-89 T 28-03-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AM393_RS01740 060a203250168500cd978e3e690ecb84 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 168 196 1.5E-89 T 28-03-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AM393_RS01740 060a203250168500cd978e3e690ecb84 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 249 276 1.5E-89 T 28-03-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AM393_RS01740 060a203250168500cd978e3e690ecb84 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 4 27 1.5E-89 T 28-03-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AM393_RS01740 060a203250168500cd978e3e690ecb84 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 119 144 1.5E-89 T 28-03-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AM393_RS01740 060a203250168500cd978e3e690ecb84 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 356 378 1.5E-89 T 28-03-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AM393_RS01740 060a203250168500cd978e3e690ecb84 468 SUPERFAMILY SSF51735 4 173 2.63E-50 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS01740 060a203250168500cd978e3e690ecb84 468 TIGRFAM TIGR00873 gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 5 467 3.0E-229 T 28-03-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AM393_RS01740 060a203250168500cd978e3e690ecb84 468 ProSitePatterns PS00461 6-phosphogluconate dehydrogenase signature. 253 265 - T 28-03-2018 IPR006184 6-phosphogluconate-binding site GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AM393_RS01740 060a203250168500cd978e3e690ecb84 468 Gene3D G3DSA:3.40.50.720 1 180 2.2E-35 T 28-03-2018 AM393_RS01740 060a203250168500cd978e3e690ecb84 468 SUPERFAMILY SSF48179 177 467 4.56E-130 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AM393_RS01740 060a203250168500cd978e3e690ecb84 468 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 5 174 3.0E-51 T 28-03-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 AM393_RS01740 060a203250168500cd978e3e690ecb84 468 Gene3D G3DSA:1.20.5.320 435 468 8.0E-21 T 28-03-2018 AM393_RS01740 060a203250168500cd978e3e690ecb84 468 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 179 466 2.6E-133 T 28-03-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AM393_RS01740 060a203250168500cd978e3e690ecb84 468 Gene3D G3DSA:1.10.1040.10 181 434 2.1E-110 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AM393_RS01740 060a203250168500cd978e3e690ecb84 468 PIRSF PIRSF000109 1 468 8.1E-241 T 28-03-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AM393_RS01740 060a203250168500cd978e3e690ecb84 468 SMART SM01350 179 467 8.9E-220 T 28-03-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AM393_RS12950 b48900ce077c7f643b755c8ea5bfbea3 223 Gene3D G3DSA:1.10.287.460 11 106 1.4E-19 T 28-03-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 AM393_RS12950 b48900ce077c7f643b755c8ea5bfbea3 223 SUPERFAMILY SSF54534 25 222 1.18E-55 T 28-03-2018 AM393_RS12950 b48900ce077c7f643b755c8ea5bfbea3 223 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 15 125 2.6E-24 T 28-03-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 AM393_RS12950 b48900ce077c7f643b755c8ea5bfbea3 223 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 133 220 1.8E-26 T 28-03-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AM393_RS12950 b48900ce077c7f643b755c8ea5bfbea3 223 Gene3D G3DSA:3.10.50.40 107 223 3.0E-40 T 28-03-2018 AM393_RS03225 4dc3f4a2cd4bbc58be4c8708b4bd8ade 161 Gene3D G3DSA:1.10.10.10 104 158 7.8E-7 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS03225 4dc3f4a2cd4bbc58be4c8708b4bd8ade 161 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 4 47 1.0E-8 T 28-03-2018 AM393_RS03225 4dc3f4a2cd4bbc58be4c8708b4bd8ade 161 Pfam PF16365 Ethanolamine utilization protein EutK C-terminus 103 157 1.3E-38 T 28-03-2018 IPR032298 Ethanolamine utilization protein EutK, C-terminal AM393_RS03225 4dc3f4a2cd4bbc58be4c8708b4bd8ade 161 ProSitePatterns PS01139 Bacterial microcompartiments proteins signature. 21 40 - T 28-03-2018 IPR020808 Bacterial microcompartments protein, conserved site AM393_RS03225 4dc3f4a2cd4bbc58be4c8708b4bd8ade 161 Pfam PF00936 BMC domain 4 79 1.9E-21 T 28-03-2018 IPR000249 Microcompartment protein, bacteria AM393_RS03225 4dc3f4a2cd4bbc58be4c8708b4bd8ade 161 SMART SM00877 3 79 3.3E-26 T 28-03-2018 IPR000249 Microcompartment protein, bacteria AM393_RS03225 4dc3f4a2cd4bbc58be4c8708b4bd8ade 161 SUPERFAMILY SSF143414 3 89 8.11E-24 T 28-03-2018 AM393_RS20735 5d8f4301969b2875ef37dd09af0f8855 57 Pfam PF01783 Ribosomal L32p protein family 2 57 2.9E-19 T 28-03-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS20735 5d8f4301969b2875ef37dd09af0f8855 57 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 55 16.363 T 28-03-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS20735 5d8f4301969b2875ef37dd09af0f8855 57 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 55 2.4E-18 T 28-03-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS20735 5d8f4301969b2875ef37dd09af0f8855 57 SUPERFAMILY SSF57829 2 55 2.08E-18 T 28-03-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 AM393_RS10290 020243e5d6aaa793854569162d50523f 142 SUPERFAMILY SSF49764 30 134 3.35E-19 T 28-03-2018 IPR008978 HSP20-like chaperone AM393_RS10290 020243e5d6aaa793854569162d50523f 142 Pfam PF00011 Hsp20/alpha crystallin family 39 135 4.9E-21 T 28-03-2018 IPR002068 Alpha crystallin/Hsp20 domain AM393_RS10290 020243e5d6aaa793854569162d50523f 142 Gene3D G3DSA:2.60.40.790 5 135 1.7E-20 T 28-03-2018 IPR008978 HSP20-like chaperone AM393_RS10290 020243e5d6aaa793854569162d50523f 142 Hamap MF_02001 Small heat shock protein IbpB [ibpB]. 1 142 44.985 T 28-03-2018 IPR022848 Small heat shock protein IbpB AM393_RS12285 d3dd7bf21c8f24fa49b3c5f919002b5f 229 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 21 139 7.7E-38 T 28-03-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 AM393_RS12285 d3dd7bf21c8f24fa49b3c5f919002b5f 229 SUPERFAMILY SSF49584 142 224 1.96E-18 T 28-03-2018 IPR016148 Pili assembly chaperone, C-terminal AM393_RS12285 d3dd7bf21c8f24fa49b3c5f919002b5f 229 Gene3D G3DSA:2.60.40.10 141 229 7.3E-20 T 28-03-2018 IPR013783 Immunoglobulin-like fold AM393_RS12285 d3dd7bf21c8f24fa49b3c5f919002b5f 229 PRINTS PR00969 Pili chaperone signature 156 171 1.4E-29 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM393_RS12285 d3dd7bf21c8f24fa49b3c5f919002b5f 229 PRINTS PR00969 Pili chaperone signature 67 88 1.4E-29 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM393_RS12285 d3dd7bf21c8f24fa49b3c5f919002b5f 229 PRINTS PR00969 Pili chaperone signature 120 135 1.4E-29 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM393_RS12285 d3dd7bf21c8f24fa49b3c5f919002b5f 229 PRINTS PR00969 Pili chaperone signature 95 112 1.4E-29 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM393_RS12285 d3dd7bf21c8f24fa49b3c5f919002b5f 229 PRINTS PR00969 Pili chaperone signature 21 30 1.4E-29 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM393_RS12285 d3dd7bf21c8f24fa49b3c5f919002b5f 229 SUPERFAMILY SSF49354 15 138 6.54E-36 T 28-03-2018 IPR008962 PapD-like AM393_RS12285 d3dd7bf21c8f24fa49b3c5f919002b5f 229 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 161 218 2.9E-12 T 28-03-2018 IPR016148 Pili assembly chaperone, C-terminal AM393_RS12285 d3dd7bf21c8f24fa49b3c5f919002b5f 229 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 94 111 - T 28-03-2018 IPR018046 Pili assembly chaperone, conserved site AM393_RS12285 d3dd7bf21c8f24fa49b3c5f919002b5f 229 Gene3D G3DSA:2.60.40.10 20 139 1.3E-34 T 28-03-2018 IPR013783 Immunoglobulin-like fold AM393_RS02755 3c9fefe505d82dada3765983e2506cad 183 Gene3D G3DSA:3.90.79.10 2 181 5.3E-39 T 28-03-2018 AM393_RS02755 3c9fefe505d82dada3765983e2506cad 183 PIRSF PIRSF017340 1 171 3.8E-73 T 28-03-2018 IPR024195 NUDIX hydrolase, YfcD, predicted GO:0016817 AM393_RS02755 3c9fefe505d82dada3765983e2506cad 183 SUPERFAMILY SSF55811 10 166 3.66E-36 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 AM393_RS02755 3c9fefe505d82dada3765983e2506cad 183 Pfam PF00293 NUDIX domain 37 153 3.9E-18 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AM393_RS00420 bb2a23db8d853189c0bf4f2da68ac9b8 152 Hamap MF_01071 UPF0266 membrane protein YobD [yobD]. 1 152 30.507 T 28-03-2018 IPR009328 Protein of unknown function DUF986 AM393_RS00420 bb2a23db8d853189c0bf4f2da68ac9b8 152 Pfam PF06173 Protein of unknown function (DUF986) 4 150 3.0E-60 T 28-03-2018 IPR009328 Protein of unknown function DUF986 AM393_RS00420 bb2a23db8d853189c0bf4f2da68ac9b8 152 PIRSF PIRSF020687 1 152 1.3E-63 T 28-03-2018 IPR009328 Protein of unknown function DUF986 AM393_RS00420 bb2a23db8d853189c0bf4f2da68ac9b8 152 ProDom PD091196 MEMBRANE UPF0266 TRANSMEMBRANE INNER YOBD PLU2700 LMO0779 PM0830 YPO1755/Y2554/YP1637 LIN0773 22 148 2.0E-53 T 28-03-2018 IPR009328 Protein of unknown function DUF986 AM393_RS21525 b367c3a895bc3266865302230a7aacfc 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 1.8E-14 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS21525 b367c3a895bc3266865302230a7aacfc 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 1.8E-14 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS21525 b367c3a895bc3266865302230a7aacfc 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 1.8E-14 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS21525 b367c3a895bc3266865302230a7aacfc 253 TIGRFAM TIGR01832 kduD: 2-deoxy-D-gluconate 3-dehydrogenase 6 253 1.5E-129 T 28-03-2018 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase GO:0008678|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.12+1.1.1.127|MetaCyc: PWY-5515|MetaCyc: PWY-6507|MetaCyc: PWY-7562 AM393_RS21525 b367c3a895bc3266865302230a7aacfc 253 Gene3D G3DSA:3.40.50.720 49 253 6.1E-60 T 28-03-2018 AM393_RS21525 b367c3a895bc3266865302230a7aacfc 253 Gene3D G3DSA:3.40.50.720 3 48 3.1E-6 T 28-03-2018 AM393_RS21525 b367c3a895bc3266865302230a7aacfc 253 SUPERFAMILY SSF51735 6 252 7.52E-77 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS21525 b367c3a895bc3266865302230a7aacfc 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 7.5E-41 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS21525 b367c3a895bc3266865302230a7aacfc 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 7.5E-41 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS21525 b367c3a895bc3266865302230a7aacfc 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 7.5E-41 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS21525 b367c3a895bc3266865302230a7aacfc 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 7.5E-41 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS21525 b367c3a895bc3266865302230a7aacfc 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 7.5E-41 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS21525 b367c3a895bc3266865302230a7aacfc 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 7.5E-41 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS21525 b367c3a895bc3266865302230a7aacfc 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM393_RS21525 b367c3a895bc3266865302230a7aacfc 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 20 250 1.9E-56 T 28-03-2018 AM393_RS16300 56c62abe571f113508689e8bb80cbbf3 367 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 7 362 7.3E-153 T 28-03-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525 AM393_RS16300 56c62abe571f113508689e8bb80cbbf3 367 SUPERFAMILY SSF53927 3 145 4.52E-50 T 28-03-2018 IPR016193 Cytidine deaminase-like GO:0003824 AM393_RS16300 56c62abe571f113508689e8bb80cbbf3 367 SUPERFAMILY SSF53597 144 362 8.25E-58 T 28-03-2018 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 AM393_RS16300 56c62abe571f113508689e8bb80cbbf3 367 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 146 365 4.2E-79 T 28-03-2018 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 AM393_RS16300 56c62abe571f113508689e8bb80cbbf3 367 Gene3D G3DSA:3.40.140.10 1 124 7.5E-34 T 28-03-2018 AM393_RS16300 56c62abe571f113508689e8bb80cbbf3 367 Gene3D G3DSA:3.40.430.10 125 365 2.5E-68 T 28-03-2018 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 AM393_RS16300 56c62abe571f113508689e8bb80cbbf3 367 Pfam PF01872 RibD C-terminal domain 147 362 1.8E-60 T 28-03-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 AM393_RS16300 56c62abe571f113508689e8bb80cbbf3 367 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 50 88 - T 28-03-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 AM393_RS16300 56c62abe571f113508689e8bb80cbbf3 367 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 2 99 1.4E-21 T 28-03-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain AM393_RS16300 56c62abe571f113508689e8bb80cbbf3 367 PIRSF PIRSF006769 1 367 3.2E-139 T 28-03-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525 AM393_RS10695 7a2b2ea28f55641058e6aa5d7e523b12 457 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 6 457 6.6E-231 T 28-03-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 AM393_RS10695 7a2b2ea28f55641058e6aa5d7e523b12 457 Pfam PF06969 HemN C-terminal domain 363 431 2.1E-9 T 28-03-2018 IPR010723 HemN, C-terminal AM393_RS10695 7a2b2ea28f55641058e6aa5d7e523b12 457 SUPERFAMILY SSF102114 5 444 1.57E-146 T 28-03-2018 AM393_RS10695 7a2b2ea28f55641058e6aa5d7e523b12 457 Pfam PF04055 Radical SAM superfamily 57 226 4.5E-18 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AM393_RS10695 7a2b2ea28f55641058e6aa5d7e523b12 457 SMART SM00729 52 272 2.1E-56 T 28-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AM393_RS10695 7a2b2ea28f55641058e6aa5d7e523b12 457 Gene3D G3DSA:3.20.20.70 38 353 8.1E-48 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM393_RS10695 7a2b2ea28f55641058e6aa5d7e523b12 457 PIRSF PIRSF000167 2 454 3.8E-180 T 28-03-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 AM393_RS11750 4925b13f68e81a734b742168008f1383 377 SUPERFAMILY SSF102114 36 363 9.68E-53 T 28-03-2018 AM393_RS11750 4925b13f68e81a734b742168008f1383 377 TIGRFAM TIGR02351 thiH: thiazole biosynthesis protein ThiH 3 368 4.4E-160 T 28-03-2018 IPR012726 Thiazole biosynthesis ThiH GO:0005506|GO:0009228|GO:0051539 KEGG: 00730+4.1.99.19|MetaCyc: PWY-6892 AM393_RS11750 4925b13f68e81a734b742168008f1383 377 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 258 360 2.4E-21 T 28-03-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AM393_RS11750 4925b13f68e81a734b742168008f1383 377 Gene3D G3DSA:3.20.20.70 16 369 2.1E-47 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM393_RS11750 4925b13f68e81a734b742168008f1383 377 Pfam PF04055 Radical SAM superfamily 82 220 2.7E-9 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AM393_RS11750 4925b13f68e81a734b742168008f1383 377 SMART SM00876 258 361 6.4E-30 T 28-03-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AM393_RS15520 aaa5f0d1ae0ba425619f398ca1b0e7e7 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 3.3E-21 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS15520 aaa5f0d1ae0ba425619f398ca1b0e7e7 301 Gene3D G3DSA:3.40.190.10 93 178 9.0E-18 T 28-03-2018 AM393_RS15520 aaa5f0d1ae0ba425619f398ca1b0e7e7 301 Gene3D G3DSA:1.10.10.10 2 85 2.6E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS15520 aaa5f0d1ae0ba425619f398ca1b0e7e7 301 SUPERFAMILY SSF46785 6 112 1.51E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS15520 aaa5f0d1ae0ba425619f398ca1b0e7e7 301 SUPERFAMILY SSF53850 91 297 3.1E-46 T 28-03-2018 AM393_RS15520 aaa5f0d1ae0ba425619f398ca1b0e7e7 301 Pfam PF03466 LysR substrate binding domain 90 293 5.5E-45 T 28-03-2018 IPR005119 LysR, substrate-binding AM393_RS15520 aaa5f0d1ae0ba425619f398ca1b0e7e7 301 Gene3D G3DSA:3.40.190.10 179 261 4.4E-23 T 28-03-2018 AM393_RS15520 aaa5f0d1ae0ba425619f398ca1b0e7e7 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 1.4E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS15520 aaa5f0d1ae0ba425619f398ca1b0e7e7 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 1.4E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS15520 aaa5f0d1ae0ba425619f398ca1b0e7e7 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 1.4E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS00595 4812941a99f979949a97c56b61a06388 76 Pfam PF06440 DNA polymerase III, theta subunit 3 70 4.1E-37 T 28-03-2018 IPR009052 DNA polymerase III-theta, bacterial GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM393_RS00595 4812941a99f979949a97c56b61a06388 76 Gene3D G3DSA:1.20.58.250 3 65 3.3E-29 T 28-03-2018 IPR009052 DNA polymerase III-theta, bacterial GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM393_RS00595 4812941a99f979949a97c56b61a06388 76 ProDom PD057609 DNA POLYMERASE THETA SUBUNIT TRANSFERASE III NUCLEOTIDYLTRANSFERASE III DNA-DIRECTED REPLICATION 1 76 5.0E-31 T 28-03-2018 IPR009052 DNA polymerase III-theta, bacterial GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM393_RS00595 4812941a99f979949a97c56b61a06388 76 SUPERFAMILY SSF46575 1 76 2.22E-33 T 28-03-2018 AM393_RS12050 8dcccd85363432715a1e2a2d4896ffee 288 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 5 288 30.325 T 28-03-2018 IPR031103 4-hydroxybenzoate octaprenyltransferase GO:0004659|GO:0006744|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 AM393_RS12050 8dcccd85363432715a1e2a2d4896ffee 288 Pfam PF01040 UbiA prenyltransferase family 28 271 1.4E-68 T 28-03-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 AM393_RS12050 8dcccd85363432715a1e2a2d4896ffee 288 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 67 89 - T 28-03-2018 IPR030470 UbiA prenyltransferase conserved site AM393_RS12050 8dcccd85363432715a1e2a2d4896ffee 288 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 11 287 9.5E-110 T 28-03-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 AM393_RS08815 938a6e4d4636f967b0d46009a1518765 246 Gene3D G3DSA:3.20.20.190 2 242 2.7E-60 T 28-03-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 AM393_RS08815 938a6e4d4636f967b0d46009a1518765 246 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 12 238 6.1E-40 T 28-03-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 AM393_RS08815 938a6e4d4636f967b0d46009a1518765 246 SUPERFAMILY SSF51695 5 239 1.36E-63 T 28-03-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 AM393_RS01825 2bffb017b7f0f987960626fb909e9b85 296 Gene3D G3DSA:3.90.550.10 1 296 2.2E-50 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM393_RS01825 2bffb017b7f0f987960626fb909e9b85 296 TIGRFAM TIGR01105 galF: regulatory protein GalF 1 296 2.4E-204 T 28-03-2018 IPR005774 UTP-glucose pyrophosphorylase, regulatory subunit GO:0006011|GO:0030234 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 AM393_RS01825 2bffb017b7f0f987960626fb909e9b85 296 Pfam PF00483 Nucleotidyl transferase 5 273 5.8E-21 T 28-03-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 AM393_RS01825 2bffb017b7f0f987960626fb909e9b85 296 SUPERFAMILY SSF53448 3 283 2.25E-57 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM393_RS26660 d166a7a3caab42c0cb5c83c8478491c8 300 SUPERFAMILY SSF52151 1 295 2.27E-58 T 28-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 AM393_RS26660 d166a7a3caab42c0cb5c83c8478491c8 300 Pfam PF01734 Patatin-like phospholipase 8 165 3.3E-23 T 28-03-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 AM393_RS26660 d166a7a3caab42c0cb5c83c8478491c8 300 Gene3D G3DSA:3.40.1090.10 1 259 1.4E-39 T 28-03-2018 AM393_RS00625 b528e19ffc6b02bb8b4e247e0590ffa1 213 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 40 49 - T 28-03-2018 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AM393_RS00625 b528e19ffc6b02bb8b4e247e0590ffa1 213 Pfam PF01081 KDPG and KHG aldolase 9 203 1.3E-88 T 28-03-2018 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AM393_RS00625 b528e19ffc6b02bb8b4e247e0590ffa1 213 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 129 142 - T 28-03-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AM393_RS00625 b528e19ffc6b02bb8b4e247e0590ffa1 213 Gene3D G3DSA:3.20.20.70 1 213 1.4E-31 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM393_RS00625 b528e19ffc6b02bb8b4e247e0590ffa1 213 SUPERFAMILY SSF51569 3 210 1.32E-67 T 28-03-2018 AM393_RS00625 b528e19ffc6b02bb8b4e247e0590ffa1 213 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 9 210 1.1E-84 T 28-03-2018 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AM393_RS15015 33ecad8a3df81bddbe6c48b48345ebea 264 TIGRFAM TIGR03331 SAM_DCase_Eco: S-adenosylmethionine decarboxylase proenzyme 3 261 1.7E-148 T 28-03-2018 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 AM393_RS15015 33ecad8a3df81bddbe6c48b48345ebea 264 PIRSF PIRSF001356 1 263 4.8E-156 T 28-03-2018 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 AM393_RS15015 33ecad8a3df81bddbe6c48b48345ebea 264 Gene3D G3DSA:3.60.90.10 32 189 7.9E-46 T 28-03-2018 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 AM393_RS15015 33ecad8a3df81bddbe6c48b48345ebea 264 Pfam PF02675 S-adenosylmethionine decarboxylase 33 169 8.8E-31 T 28-03-2018 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 AM393_RS15015 33ecad8a3df81bddbe6c48b48345ebea 264 Hamap MF_00465 S-adenosylmethionine decarboxylase proenzyme [speD]. 1 264 176.403 T 28-03-2018 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 AM393_RS15015 33ecad8a3df81bddbe6c48b48345ebea 264 SUPERFAMILY SSF56276 112 173 2.43E-23 T 28-03-2018 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 AM393_RS15015 33ecad8a3df81bddbe6c48b48345ebea 264 SUPERFAMILY SSF56276 41 84 2.43E-23 T 28-03-2018 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 AM393_RS05145 8466297cde8694ec0839fbe1b8c5312d 507 SUPERFAMILY SSF52540 1 234 8.35E-54 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS05145 8466297cde8694ec0839fbe1b8c5312d 507 TIGRFAM TIGR00313 cobQ: cobyric acid synthase CobQ 5 493 4.8E-157 T 28-03-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 AM393_RS05145 8466297cde8694ec0839fbe1b8c5312d 507 Gene3D G3DSA:3.40.50.300 2 240 2.1E-48 T 28-03-2018 AM393_RS05145 8466297cde8694ec0839fbe1b8c5312d 507 Gene3D G3DSA:3.40.50.880 252 497 6.7E-32 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AM393_RS05145 8466297cde8694ec0839fbe1b8c5312d 507 SUPERFAMILY SSF52317 254 456 5.18E-42 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AM393_RS05145 8466297cde8694ec0839fbe1b8c5312d 507 Hamap MF_00028 Cobyric acid synthase [cobQ]. 1 502 188.762 T 28-03-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 AM393_RS05145 8466297cde8694ec0839fbe1b8c5312d 507 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 253 447 3.3E-57 T 28-03-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 AM393_RS05145 8466297cde8694ec0839fbe1b8c5312d 507 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 228 4.9E-21 T 28-03-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain AM393_RS05680 cd51c80213130d8ed7918f22760ced5a 182 Pfam PF00419 Fimbrial protein 33 182 6.4E-22 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM393_RS05680 cd51c80213130d8ed7918f22760ced5a 182 SUPERFAMILY SSF49401 32 182 1.94E-36 T 28-03-2018 IPR008966 Adhesion domain AM393_RS05680 cd51c80213130d8ed7918f22760ced5a 182 Gene3D G3DSA:2.60.40.1090 31 182 7.2E-38 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM393_RS21735 04f7602160b4cf972fe814c0d212822b 102 Pfam PF06305 Lipopolysaccharide assembly protein A domain 23 85 6.8E-21 T 28-03-2018 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 AM393_RS21735 04f7602160b4cf972fe814c0d212822b 102 Hamap MF_01948 Lipopolysaccharide assembly protein A [lapA]. 1 94 22.87 T 28-03-2018 IPR032906 Lipopolysaccharide assembly protein A GO:0005886|GO:0008653 AM393_RS07620 34fc9aa66a8ce5f5ed9485dd8c466877 96 SUPERFAMILY SSF52091 7 91 3.14E-13 T 28-03-2018 IPR002645 STAS domain AM393_RS07620 34fc9aa66a8ce5f5ed9485dd8c466877 96 Pfam PF13466 STAS domain 14 90 1.9E-15 T 28-03-2018 IPR002645 STAS domain AM393_RS07620 34fc9aa66a8ce5f5ed9485dd8c466877 96 Gene3D G3DSA:3.30.750.24 11 94 2.4E-6 T 28-03-2018 IPR002645 STAS domain AM393_RS18510 1dfeed27b04eed0e123bb03c3c94119f 467 Gene3D G3DSA:2.40.160.10 2 467 1.3E-96 T 28-03-2018 AM393_RS18510 1dfeed27b04eed0e123bb03c3c94119f 467 Pfam PF03573 outer membrane porin, OprD family 33 431 9.9E-25 T 28-03-2018 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 AM393_RS22795 74869a7a03a6a163fc81651cf04bb3a4 331 Gene3D G3DSA:3.40.630.10 35 301 1.8E-25 T 28-03-2018 AM393_RS22795 74869a7a03a6a163fc81651cf04bb3a4 331 SUPERFAMILY SSF53187 12 321 7.28E-71 T 28-03-2018 AM393_RS22795 74869a7a03a6a163fc81651cf04bb3a4 331 Hamap MF_00767 Succinylglutamate desuccinylase [astE]. 1 331 129.684 T 28-03-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 AM393_RS22795 74869a7a03a6a163fc81651cf04bb3a4 331 TIGRFAM TIGR03242 arg_catab_astE: succinylglutamate desuccinylase 20 320 3.9E-111 T 28-03-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 AM393_RS22795 74869a7a03a6a163fc81651cf04bb3a4 331 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 43 320 3.8E-53 T 28-03-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 AM393_RS18230 f1bbc641eb41fbc634c919f42acc62fa 521 Gene3D G3DSA:3.50.50.60 341 443 1.1E-21 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS18230 f1bbc641eb41fbc634c919f42acc62fa 521 Gene3D G3DSA:3.50.50.60 228 340 5.7E-15 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS18230 f1bbc641eb41fbc634c919f42acc62fa 521 Gene3D G3DSA:3.50.50.60 196 227 2.3E-7 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS18230 f1bbc641eb41fbc634c919f42acc62fa 521 TIGRFAM TIGR03140 AhpF: alkyl hydroperoxide reductase subunit F 1 517 7.6E-242 T 28-03-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0016651|GO:0050660|GO:0051287|GO:0055114 AM393_RS18230 f1bbc641eb41fbc634c919f42acc62fa 521 Gene3D G3DSA:3.50.50.60 444 521 3.1E-11 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS18230 f1bbc641eb41fbc634c919f42acc62fa 521 Gene3D G3DSA:3.40.30.10 103 195 1.2E-7 T 28-03-2018 AM393_RS18230 f1bbc641eb41fbc634c919f42acc62fa 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 442 458 1.1E-37 T 28-03-2018 AM393_RS18230 f1bbc641eb41fbc634c919f42acc62fa 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 215 234 1.1E-37 T 28-03-2018 AM393_RS18230 f1bbc641eb41fbc634c919f42acc62fa 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 315 333 1.1E-37 T 28-03-2018 AM393_RS18230 f1bbc641eb41fbc634c919f42acc62fa 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 468 490 1.1E-37 T 28-03-2018 AM393_RS18230 f1bbc641eb41fbc634c919f42acc62fa 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 357 375 1.1E-37 T 28-03-2018 AM393_RS18230 f1bbc641eb41fbc634c919f42acc62fa 521 PIRSF PIRSF000238 1 521 1.7E-263 T 28-03-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0016651|GO:0050660|GO:0051287|GO:0055114 AM393_RS18230 f1bbc641eb41fbc634c919f42acc62fa 521 SUPERFAMILY SSF52833 106 197 9.27E-24 T 28-03-2018 IPR012336 Thioredoxin-like fold AM393_RS18230 f1bbc641eb41fbc634c919f42acc62fa 521 SUPERFAMILY SSF52833 1 101 1.08E-29 T 28-03-2018 IPR012336 Thioredoxin-like fold AM393_RS18230 f1bbc641eb41fbc634c919f42acc62fa 521 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 213 502 1.5E-43 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS18230 f1bbc641eb41fbc634c919f42acc62fa 521 Pfam PF13192 Thioredoxin domain 126 194 2.2E-8 T 28-03-2018 IPR012336 Thioredoxin-like fold AM393_RS18230 f1bbc641eb41fbc634c919f42acc62fa 521 Gene3D G3DSA:3.40.30.10 1 94 4.7E-29 T 28-03-2018 AM393_RS18230 f1bbc641eb41fbc634c919f42acc62fa 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 214 236 8.2E-66 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM393_RS18230 f1bbc641eb41fbc634c919f42acc62fa 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 478 496 8.2E-66 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM393_RS18230 f1bbc641eb41fbc634c919f42acc62fa 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 246 261 8.2E-66 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM393_RS18230 f1bbc641eb41fbc634c919f42acc62fa 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 266 276 8.2E-66 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM393_RS18230 f1bbc641eb41fbc634c919f42acc62fa 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 316 324 8.2E-66 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM393_RS18230 f1bbc641eb41fbc634c919f42acc62fa 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 405 421 8.2E-66 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM393_RS18230 f1bbc641eb41fbc634c919f42acc62fa 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 444 465 8.2E-66 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM393_RS18230 f1bbc641eb41fbc634c919f42acc62fa 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 338 350 8.2E-66 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM393_RS18230 f1bbc641eb41fbc634c919f42acc62fa 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 353 377 8.2E-66 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM393_RS18230 f1bbc641eb41fbc634c919f42acc62fa 521 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 345 365 - T 28-03-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 AM393_RS18230 f1bbc641eb41fbc634c919f42acc62fa 521 SUPERFAMILY SSF51905 206 514 1.81E-49 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS15355 2ab486449458183db4e45feb264b06b1 450 Pfam PF13180 PDZ domain 213 287 1.4E-9 T 28-03-2018 IPR001478 PDZ domain GO:0005515 AM393_RS15355 2ab486449458183db4e45feb264b06b1 450 SUPERFAMILY SSF50156 87 181 4.86E-12 T 28-03-2018 IPR001478 PDZ domain GO:0005515 AM393_RS15355 2ab486449458183db4e45feb264b06b1 450 Pfam PF02163 Peptidase family M50 10 438 8.4E-87 T 28-03-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889|Reactome: R-MMU-8963889 AM393_RS15355 2ab486449458183db4e45feb264b06b1 450 SUPERFAMILY SSF50156 196 290 1.24E-18 T 28-03-2018 IPR001478 PDZ domain GO:0005515 AM393_RS15355 2ab486449458183db4e45feb264b06b1 450 SMART SM00228 211 280 7.1E-11 T 28-03-2018 IPR001478 PDZ domain GO:0005515 AM393_RS15355 2ab486449458183db4e45feb264b06b1 450 SMART SM00228 115 185 0.19 T 28-03-2018 IPR001478 PDZ domain GO:0005515 AM393_RS15355 2ab486449458183db4e45feb264b06b1 450 Gene3D G3DSA:2.30.42.10 222 309 2.9E-19 T 28-03-2018 AM393_RS15355 2ab486449458183db4e45feb264b06b1 450 Gene3D G3DSA:2.30.42.10 126 220 6.9E-10 T 28-03-2018 AM393_RS15355 2ab486449458183db4e45feb264b06b1 450 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 3 450 1.9E-166 T 28-03-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 AM393_RS16135 01558806c6625de98502b697cb624987 63 Pfam PF16362 YaiA protein 1 63 4.9E-38 T 28-03-2018 IPR032303 YaiA protein AM393_RS28680 d67803dedaafdad0dd27052fb424f7a7 324 Pfam PF00158 Sigma-54 interaction domain 9 170 9.5E-62 T 28-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AM393_RS28680 d67803dedaafdad0dd27052fb424f7a7 324 Gene3D G3DSA:1.10.10.60 271 324 3.3E-11 T 28-03-2018 AM393_RS28680 d67803dedaafdad0dd27052fb424f7a7 324 Gene3D G3DSA:1.10.8.60 181 251 1.1E-18 T 28-03-2018 AM393_RS28680 d67803dedaafdad0dd27052fb424f7a7 324 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 305 324 1.8E-7 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM393_RS28680 d67803dedaafdad0dd27052fb424f7a7 324 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 288 305 1.8E-7 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM393_RS28680 d67803dedaafdad0dd27052fb424f7a7 324 SMART SM00382 28 180 1.9E-10 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS28680 d67803dedaafdad0dd27052fb424f7a7 324 TIGRFAM TIGR02974 phageshock_pspF: psp operon transcriptional activator 8 322 9.2E-161 T 28-03-2018 IPR014317 Transcription activator PspF AM393_RS28680 d67803dedaafdad0dd27052fb424f7a7 324 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 94 109 - T 28-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AM393_RS28680 d67803dedaafdad0dd27052fb424f7a7 324 Pfam PF02954 Bacterial regulatory protein, Fis family 284 321 3.9E-7 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM393_RS28680 d67803dedaafdad0dd27052fb424f7a7 324 SUPERFAMILY SSF52540 10 243 2.1E-65 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS28680 d67803dedaafdad0dd27052fb424f7a7 324 SUPERFAMILY SSF46689 222 324 8.51E-10 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS28680 d67803dedaafdad0dd27052fb424f7a7 324 Gene3D G3DSA:3.40.50.300 1 179 4.3E-28 T 28-03-2018 AM393_RS28680 d67803dedaafdad0dd27052fb424f7a7 324 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 222 231 - T 28-03-2018 IPR025944 Sigma-54 interaction domain, conserved site AM393_RS26765 fefdf84137144f2c2868d407c39aa223 262 TIGRFAM TIGR01184 ntrCD: nitrate ABC transporter, ATP-binding proteins C and D 24 254 1.3E-103 T 28-03-2018 IPR005890 Nitrate transport ATP-binding subunit C/D GO:0015112|GO:0015706|GO:0016020 AM393_RS26765 fefdf84137144f2c2868d407c39aa223 262 Pfam PF00005 ABC transporter 24 166 1.2E-32 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS26765 fefdf84137144f2c2868d407c39aa223 262 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS26765 fefdf84137144f2c2868d407c39aa223 262 SUPERFAMILY SSF52540 4 233 1.21E-67 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS26765 fefdf84137144f2c2868d407c39aa223 262 Gene3D G3DSA:3.40.50.300 1 242 3.5E-57 T 28-03-2018 AM393_RS26765 fefdf84137144f2c2868d407c39aa223 262 SMART SM00382 33 216 2.6E-18 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS12150 a50d6f248e4f5dfb08b3950cb812655a 725 SUPERFAMILY SSF56935 19 725 2.38E-129 T 28-03-2018 AM393_RS12150 a50d6f248e4f5dfb08b3950cb812655a 725 Gene3D G3DSA:2.40.170.20 162 725 3.0E-81 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM393_RS12150 a50d6f248e4f5dfb08b3950cb812655a 725 Gene3D G3DSA:2.170.130.10 27 161 2.8E-31 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM393_RS12150 a50d6f248e4f5dfb08b3950cb812655a 725 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 708 725 - T 28-03-2018 IPR010917 TonB-dependent receptor, conserved site AM393_RS12150 a50d6f248e4f5dfb08b3950cb812655a 725 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 35 725 2.1E-115 T 28-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AM393_RS12150 a50d6f248e4f5dfb08b3950cb812655a 725 Pfam PF00593 TonB dependent receptor 261 722 1.7E-52 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM393_RS12150 a50d6f248e4f5dfb08b3950cb812655a 725 Pfam PF07715 TonB-dependent Receptor Plug Domain 34 148 1.3E-25 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM393_RS26530 f854e66a6c0a020d224544c32c22130a 180 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 15 179 3.4E-77 T 28-03-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 AM393_RS26530 f854e66a6c0a020d224544c32c22130a 180 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 91 177 3.6E-37 T 28-03-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 AM393_RS26530 f854e66a6c0a020d224544c32c22130a 180 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 15 84 1.7E-30 T 28-03-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 AM393_RS26530 f854e66a6c0a020d224544c32c22130a 180 Gene3D G3DSA:3.30.110.10 87 180 4.8E-35 T 28-03-2018 AM393_RS26530 f854e66a6c0a020d224544c32c22130a 180 Gene3D G3DSA:3.10.20.80 10 86 6.9E-32 T 28-03-2018 AM393_RS26530 f854e66a6c0a020d224544c32c22130a 180 SUPERFAMILY SSF54364 13 86 1.05E-28 T 28-03-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 AM393_RS26530 f854e66a6c0a020d224544c32c22130a 180 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 9 179 30.624 T 28-03-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 AM393_RS26530 f854e66a6c0a020d224544c32c22130a 180 SUPERFAMILY SSF55200 90 179 1.02E-34 T 28-03-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 AM393_RS26530 f854e66a6c0a020d224544c32c22130a 180 ProSitePatterns PS00938 Initiation factor 3 signature. 66 79 - T 28-03-2018 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 AM393_RS17360 9eaeebcddacbe0f7cdcb73ba1e06f011 444 Pfam PF13520 Amino acid permease 7 418 2.6E-39 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AM393_RS17360 9eaeebcddacbe0f7cdcb73ba1e06f011 444 PIRSF PIRSF006060 2 441 1.9E-50 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AM393_RS17360 9eaeebcddacbe0f7cdcb73ba1e06f011 444 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 2 441 1.1E-142 T 28-03-2018 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 AM393_RS07580 b41d6c65e0d415a85b53224ba70b49b7 392 Hamap MF_01454 GTPase Obg [obg]. 2 333 48.414 T 28-03-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 AM393_RS07580 b41d6c65e0d415a85b53224ba70b49b7 392 Gene3D G3DSA:3.40.50.300 159 376 6.2E-34 T 28-03-2018 AM393_RS07580 b41d6c65e0d415a85b53224ba70b49b7 392 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 331 9.0E-150 T 28-03-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 AM393_RS07580 b41d6c65e0d415a85b53224ba70b49b7 392 PIRSF PIRSF002401 1 377 4.4E-142 T 28-03-2018 IPR035101 GTP-binding protein, Obg-type AM393_RS07580 b41d6c65e0d415a85b53224ba70b49b7 392 Pfam PF01926 50S ribosome-binding GTPase 161 284 9.2E-24 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 AM393_RS07580 b41d6c65e0d415a85b53224ba70b49b7 392 Pfam PF01018 GTP1/OBG 4 157 3.5E-59 T 28-03-2018 IPR006169 GTP1/OBG domain AM393_RS07580 b41d6c65e0d415a85b53224ba70b49b7 392 Gene3D G3DSA:2.70.210.12 2 156 1.5E-58 T 28-03-2018 IPR006169 GTP1/OBG domain AM393_RS07580 b41d6c65e0d415a85b53224ba70b49b7 392 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 28-03-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 AM393_RS07580 b41d6c65e0d415a85b53224ba70b49b7 392 SUPERFAMILY SSF82051 2 157 1.1E-56 T 28-03-2018 IPR006169 GTP1/OBG domain AM393_RS07580 b41d6c65e0d415a85b53224ba70b49b7 392 SUPERFAMILY SSF52540 152 340 1.09E-48 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS07580 b41d6c65e0d415a85b53224ba70b49b7 392 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 3.6E-34 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 AM393_RS07580 b41d6c65e0d415a85b53224ba70b49b7 392 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 3.6E-34 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 AM393_RS07580 b41d6c65e0d415a85b53224ba70b49b7 392 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 3.6E-34 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 AM393_RS07580 b41d6c65e0d415a85b53224ba70b49b7 392 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 3.6E-34 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 AM393_RS10200 b8541de78b4b7a44faee392aac26b299 95 Pfam PF01842 ACT domain 9 72 6.7E-9 T 28-03-2018 IPR002912 ACT domain AM393_RS10200 b8541de78b4b7a44faee392aac26b299 95 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 14 77 2.0E-14 T 28-03-2018 AM393_RS10200 b8541de78b4b7a44faee392aac26b299 95 Gene3D G3DSA:3.30.70.260 1 95 2.9E-19 T 28-03-2018 AM393_RS10200 b8541de78b4b7a44faee392aac26b299 95 SUPERFAMILY SSF55021 8 79 9.67E-16 T 28-03-2018 AM393_RS03625 01b16d698ae13b7764415fbec8faceff 163 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 28-03-2018 IPR030489 Transcription regulator Rrf2-type, conserved site AM393_RS03625 01b16d698ae13b7764415fbec8faceff 163 TIGRFAM TIGR02010 IscR: iron-sulfur cluster assembly transcription factor IscR 1 134 3.0E-66 T 28-03-2018 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 AM393_RS03625 01b16d698ae13b7764415fbec8faceff 163 SUPERFAMILY SSF46785 2 133 7.66E-36 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS03625 01b16d698ae13b7764415fbec8faceff 163 Hamap MF_01176 HTH-type transcriptional regulator IscR [iscR]. 1 163 46.665 T 28-03-2018 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 AM393_RS03625 01b16d698ae13b7764415fbec8faceff 163 Pfam PF02082 Transcriptional regulator 1 83 5.3E-27 T 28-03-2018 IPR000944 Transcription regulator Rrf2-type AM393_RS03625 01b16d698ae13b7764415fbec8faceff 163 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 131 1.9E-46 T 28-03-2018 IPR000944 Transcription regulator Rrf2-type AM393_RS03625 01b16d698ae13b7764415fbec8faceff 163 Gene3D G3DSA:1.10.10.10 1 155 7.1E-30 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS11295 f112739366e19c99a2143615b9cb77da 348 Gene3D G3DSA:1.10.287.210 203 294 3.7E-20 T 28-03-2018 AM393_RS11295 f112739366e19c99a2143615b9cb77da 348 SUPERFAMILY SSF160355 54 318 1.57E-83 T 28-03-2018 AM393_RS11295 f112739366e19c99a2143615b9cb77da 348 Hamap MF_02025 ECA polysaccharide chain length modulation protein [wzzE]. 8 347 57.051 T 28-03-2018 IPR032895 ECA polysaccharide chain length modulation protein WzzE GO:0009246|GO:0016021 AM393_RS11295 f112739366e19c99a2143615b9cb77da 348 Gene3D G3DSA:3.30.1890.10 43 202 1.9E-55 T 28-03-2018 AM393_RS11295 f112739366e19c99a2143615b9cb77da 348 Pfam PF02706 Chain length determinant protein 15 87 4.5E-12 T 28-03-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 AM393_RS02680 66679e5e1e159a24f4fb8eb95f486845 445 SMART SM00928 336 381 4.3E-22 T 28-03-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM393_RS02680 66679e5e1e159a24f4fb8eb95f486845 445 SUPERFAMILY SSF142984 248 330 9.68E-21 T 28-03-2018 AM393_RS02680 66679e5e1e159a24f4fb8eb95f486845 445 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 349 360 - T 28-03-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM393_RS02680 66679e5e1e159a24f4fb8eb95f486845 445 TIGRFAM TIGR01959 nuoF_fam: NADH oxidoreductase (quinone), F subunit 13 423 1.5E-204 T 28-03-2018 IPR011537 NADH ubiquinone oxidoreductase, F subunit GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM393_RS02680 66679e5e1e159a24f4fb8eb95f486845 445 Pfam PF10531 SLBB domain 253 295 5.4E-7 T 28-03-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM393_RS02680 66679e5e1e159a24f4fb8eb95f486845 445 SUPERFAMILY SSF142019 13 247 1.01E-86 T 28-03-2018 AM393_RS02680 66679e5e1e159a24f4fb8eb95f486845 445 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 54 226 1.4E-50 T 28-03-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM393_RS02680 66679e5e1e159a24f4fb8eb95f486845 445 ProSitePatterns PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. 174 189 - T 28-03-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM393_RS02680 66679e5e1e159a24f4fb8eb95f486845 445 SUPERFAMILY SSF140490 333 429 3.79E-32 T 28-03-2018 AM393_RS02680 66679e5e1e159a24f4fb8eb95f486845 445 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 339 421 2.5E-26 T 28-03-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM393_RS09590 cefe41afe1c0752304a0db4611d330ae 514 Gene3D G3DSA:3.20.20.370 1 51 0.042 T 28-03-2018 AM393_RS09590 cefe41afe1c0752304a0db4611d330ae 514 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 6 511 1.5E-243 T 28-03-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM393_RS09590 cefe41afe1c0752304a0db4611d330ae 514 Gene3D G3DSA:3.40.720.10 303 513 2.3E-35 T 28-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AM393_RS09590 cefe41afe1c0752304a0db4611d330ae 514 PIRSF PIRSF001492 1 514 1.7E-204 T 28-03-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM393_RS09590 cefe41afe1c0752304a0db4611d330ae 514 Pfam PF01676 Metalloenzyme superfamily 6 500 4.1E-83 T 28-03-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 AM393_RS09590 cefe41afe1c0752304a0db4611d330ae 514 Gene3D G3DSA:3.40.1450.10 79 302 1.6E-94 T 28-03-2018 AM393_RS09590 cefe41afe1c0752304a0db4611d330ae 514 SUPERFAMILY SSF64158 79 310 3.92E-84 T 28-03-2018 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM393_RS09590 cefe41afe1c0752304a0db4611d330ae 514 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 86 299 1.9E-81 T 28-03-2018 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM393_RS09590 cefe41afe1c0752304a0db4611d330ae 514 SUPERFAMILY SSF53649 5 79 7.46E-74 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AM393_RS09590 cefe41afe1c0752304a0db4611d330ae 514 SUPERFAMILY SSF53649 308 510 7.46E-74 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AM393_RS09590 cefe41afe1c0752304a0db4611d330ae 514 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 6 512 49.637 T 28-03-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM393_RS20035 9a5fcb97bacaae0b45e9f5c0eb3547ba 266 Gene3D G3DSA:3.40.50.150 8 261 7.4E-53 T 28-03-2018 AM393_RS20035 9a5fcb97bacaae0b45e9f5c0eb3547ba 266 Hamap MF_02057 tRNA 5-carboxymethoxyuridine methyltransferase [cmoM]. 2 255 42.675 T 28-03-2018 IPR033664 tRNA 5-carboxymethoxyuridine methyltransferase GO:0008168 AM393_RS20035 9a5fcb97bacaae0b45e9f5c0eb3547ba 266 SUPERFAMILY SSF53335 6 246 4.56E-37 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM393_RS20035 9a5fcb97bacaae0b45e9f5c0eb3547ba 266 Pfam PF13847 Methyltransferase domain 46 171 2.1E-16 T 28-03-2018 IPR025714 Methyltransferase domain AM393_RS03540 37f7886575717e81b5778b17f87e3ce2 373 SUPERFAMILY SSF56014 265 352 7.85E-10 T 28-03-2018 AM393_RS03540 37f7886575717e81b5778b17f87e3ce2 373 Pfam PF04551 GcpE protein 13 353 1.5E-131 T 28-03-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 AM393_RS03540 37f7886575717e81b5778b17f87e3ce2 373 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 9 350 8.1E-126 T 28-03-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 AM393_RS03540 37f7886575717e81b5778b17f87e3ce2 373 PIRSF PIRSF004640 1 363 6.8E-148 T 28-03-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 AM393_RS03540 37f7886575717e81b5778b17f87e3ce2 373 SUPERFAMILY SSF51717 15 208 5.02E-10 T 28-03-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM393_RS03540 37f7886575717e81b5778b17f87e3ce2 373 Gene3D G3DSA:3.20.20.120 20 175 1.0E-17 T 28-03-2018 IPR029065 Enolase C-terminal domain-like AM393_RS03540 37f7886575717e81b5778b17f87e3ce2 373 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 7 357 34.505 T 28-03-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 AM393_RS03735 990e310c612339184e6e87873bb490e0 538 SUPERFAMILY SSF53955 273 425 3.97E-35 T 28-03-2018 IPR023346 Lysozyme-like domain AM393_RS03735 990e310c612339184e6e87873bb490e0 538 SUPERFAMILY SSF53955 460 468 3.97E-35 T 28-03-2018 IPR023346 Lysozyme-like domain AM393_RS03735 990e310c612339184e6e87873bb490e0 538 Pfam PF01464 Transglycosylase SLT domain 324 430 4.1E-23 T 28-03-2018 IPR008258 Transglycosylase SLT domain 1 AM393_RS03735 990e310c612339184e6e87873bb490e0 538 Gene3D G3DSA:3.40.190.10 60 219 3.4E-22 T 28-03-2018 AM393_RS03735 990e310c612339184e6e87873bb490e0 538 SMART SM00062 71 296 1.1E-46 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM393_RS03735 990e310c612339184e6e87873bb490e0 538 Hamap MF_02016 Membrane-bound lytic murein transglycosylase F [mltF]. 32 499 46.428 T 28-03-2018 IPR023703 Membrane-bound lytic murein transglycosylase F GO:0016837 AM393_RS03735 990e310c612339184e6e87873bb490e0 538 Gene3D G3DSA:3.40.190.10 220 299 0.001 T 28-03-2018 AM393_RS03735 990e310c612339184e6e87873bb490e0 538 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 78 295 3.0E-32 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM393_RS03735 990e310c612339184e6e87873bb490e0 538 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 337 365 - T 28-03-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 AM393_RS03735 990e310c612339184e6e87873bb490e0 538 Gene3D G3DSA:1.10.530.10 300 478 5.4E-36 T 28-03-2018 AM393_RS03735 990e310c612339184e6e87873bb490e0 538 SUPERFAMILY SSF53850 68 296 5.67E-35 T 28-03-2018 AM393_RS03410 67ca3e340d1e225ba39b298594ae06f0 119 Gene3D G3DSA:3.40.30.10 2 119 3.5E-37 T 28-03-2018 AM393_RS03410 67ca3e340d1e225ba39b298594ae06f0 119 Pfam PF03960 ArsC family 8 117 3.4E-21 T 28-03-2018 IPR006660 Arsenate reductase-like AM393_RS03410 67ca3e340d1e225ba39b298594ae06f0 119 SUPERFAMILY SSF52833 5 118 6.38E-34 T 28-03-2018 IPR012336 Thioredoxin-like fold AM393_RS03410 67ca3e340d1e225ba39b298594ae06f0 119 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 5 117 3.6E-47 T 28-03-2018 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 AM393_RS07170 a9c4fe35c2fb13075f4a5d15c36a9894 329 Gene3D G3DSA:3.30.360.10 143 325 4.7E-26 T 28-03-2018 AM393_RS07170 a9c4fe35c2fb13075f4a5d15c36a9894 329 SUPERFAMILY SSF51735 2 151 9.26E-46 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS07170 a9c4fe35c2fb13075f4a5d15c36a9894 329 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 2 118 3.9E-28 T 28-03-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 AM393_RS07170 a9c4fe35c2fb13075f4a5d15c36a9894 329 SUPERFAMILY SSF55347 126 291 1.44E-23 T 28-03-2018 AM393_RS07170 a9c4fe35c2fb13075f4a5d15c36a9894 329 Gene3D G3DSA:3.40.50.720 1 142 1.2E-35 T 28-03-2018 AM393_RS03460 e510572c3d6ef5a3a46f9d1d526d9516 510 SUPERFAMILY SSF109604 313 506 1.26E-52 T 28-03-2018 AM393_RS03460 e510572c3d6ef5a3a46f9d1d526d9516 510 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 13 306 1.2E-97 T 28-03-2018 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 AM393_RS03460 e510572c3d6ef5a3a46f9d1d526d9516 510 SUPERFAMILY SSF53067 137 310 4.23E-47 T 28-03-2018 AM393_RS03460 e510572c3d6ef5a3a46f9d1d526d9516 510 Pfam PF02541 Ppx/GppA phosphatase family 26 308 1.3E-100 T 28-03-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 AM393_RS03460 e510572c3d6ef5a3a46f9d1d526d9516 510 Gene3D G3DSA:3.30.420.150 125 305 1.1E-34 T 28-03-2018 AM393_RS03460 e510572c3d6ef5a3a46f9d1d526d9516 510 Gene3D G3DSA:3.30.420.40 1 124 5.5E-38 T 28-03-2018 AM393_RS03460 e510572c3d6ef5a3a46f9d1d526d9516 510 SUPERFAMILY SSF53067 13 133 2.04E-36 T 28-03-2018 AM393_RS03460 e510572c3d6ef5a3a46f9d1d526d9516 510 PIRSF PIRSF001267 3 506 5.0E-205 T 28-03-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 AM393_RS24810 5686a843c6182c841f407415accef76a 282 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 103 273 5.4E-23 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS24810 5686a843c6182c841f407415accef76a 282 Gene3D G3DSA:1.10.3720.10 7 276 2.1E-42 T 28-03-2018 AM393_RS24810 5686a843c6182c841f407415accef76a 282 SUPERFAMILY SSF161098 78 267 1.57E-28 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS15300 a7f2a162270a8e4e8bb697928dbfe10f 274 Gene3D G3DSA:1.10.166.10 3 69 2.3E-28 T 28-03-2018 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117 AM393_RS15300 a7f2a162270a8e4e8bb697928dbfe10f 274 TIGRFAM TIGR00965 dapD: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 3 273 1.1E-163 T 28-03-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 AM393_RS15300 a7f2a162270a8e4e8bb697928dbfe10f 274 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 134 162 - T 28-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AM393_RS15300 a7f2a162270a8e4e8bb697928dbfe10f 274 Gene3D G3DSA:2.160.10.10 87 257 2.0E-36 T 28-03-2018 AM393_RS15300 a7f2a162270a8e4e8bb697928dbfe10f 274 SUPERFAMILY SSF51161 1 256 1.94E-79 T 28-03-2018 IPR011004 Trimeric LpxA-like AM393_RS15300 a7f2a162270a8e4e8bb697928dbfe10f 274 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 133 166 0.0019 T 28-03-2018 IPR001451 Hexapeptide repeat AM393_RS15300 a7f2a162270a8e4e8bb697928dbfe10f 274 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 175 209 8.7E-13 T 28-03-2018 IPR001451 Hexapeptide repeat AM393_RS15300 a7f2a162270a8e4e8bb697928dbfe10f 274 Pfam PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal 3 69 2.5E-25 T 28-03-2018 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117 AM393_RS15300 a7f2a162270a8e4e8bb697928dbfe10f 274 Hamap MF_00811 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 1 272 58.635 T 28-03-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 AM393_RS10175 7ab12e1a77830bee9a8438d91d822f87 150 Pfam PF06711 Protein of unknown function (DUF1198) 1 143 2.1E-67 T 28-03-2018 IPR009587 Protein of unknown function DUF1198 AM393_RS10175 7ab12e1a77830bee9a8438d91d822f87 150 ProDom PD093913 YICN MEMBRANE INNER EXPORTED 1 145 1.0E-49 T 28-03-2018 IPR009587 Protein of unknown function DUF1198 AM393_RS24010 0fa81cb79337423c24f7304be4e50f58 345 PRINTS PR00069 Aldo-keto reductase signature 113 131 9.8E-6 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM393_RS24010 0fa81cb79337423c24f7304be4e50f58 345 PRINTS PR00069 Aldo-keto reductase signature 144 161 9.8E-6 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM393_RS24010 0fa81cb79337423c24f7304be4e50f58 345 PRINTS PR00069 Aldo-keto reductase signature 47 71 9.8E-6 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM393_RS24010 0fa81cb79337423c24f7304be4e50f58 345 SUPERFAMILY SSF51430 1 322 3.27E-102 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM393_RS24010 0fa81cb79337423c24f7304be4e50f58 345 Gene3D G3DSA:3.20.20.100 3 318 3.4E-96 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM393_RS24010 0fa81cb79337423c24f7304be4e50f58 345 Pfam PF00248 Aldo/keto reductase family 15 315 8.4E-72 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM393_RS03300 82ba323a267114e87cb7913a8b6db42c 111 SUPERFAMILY SSF143414 39 106 2.35E-12 T 28-03-2018 AM393_RS03300 82ba323a267114e87cb7913a8b6db42c 111 PIRSF PIRSF012296 1 111 3.9E-56 T 28-03-2018 IPR009307 Ethanolamine utilisation EutS GO:0031469 AM393_RS03300 82ba323a267114e87cb7913a8b6db42c 111 SMART SM00877 39 111 3.2E-12 T 28-03-2018 IPR000249 Microcompartment protein, bacteria AM393_RS03300 82ba323a267114e87cb7913a8b6db42c 111 Pfam PF00936 BMC domain 40 94 3.1E-11 T 28-03-2018 IPR000249 Microcompartment protein, bacteria AM393_RS06530 96466c9007fbd127a7de4bc57194a277 290 Pfam PF08843 Nucleotidyl transferase AbiEii toxin, Type IV TA system 150 274 6.5E-5 T 28-03-2018 IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system AM393_RS23780 266c0cff323f53334625bb238b726b4f 430 Gene3D G3DSA:3.20.20.80 57 403 2.4E-43 T 28-03-2018 AM393_RS23780 266c0cff323f53334625bb238b726b4f 430 SUPERFAMILY SSF51445 70 376 3.48E-31 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily AM393_RS23780 266c0cff323f53334625bb238b726b4f 430 Pfam PF02638 Glycosyl hydrolase-like 10 44 377 4.7E-116 T 28-03-2018 IPR003790 Glycosyl hydrolase-like 10 AM393_RS11105 f636ff29837b89d4580cfe562aa6b348 305 SUPERFAMILY SSF46785 1 86 1.27E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS11105 f636ff29837b89d4580cfe562aa6b348 305 Pfam PF03466 LysR substrate binding domain 89 291 1.1E-54 T 28-03-2018 IPR005119 LysR, substrate-binding AM393_RS11105 f636ff29837b89d4580cfe562aa6b348 305 SUPERFAMILY SSF53850 89 295 1.86E-47 T 28-03-2018 AM393_RS11105 f636ff29837b89d4580cfe562aa6b348 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.4E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS11105 f636ff29837b89d4580cfe562aa6b348 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.4E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS11105 f636ff29837b89d4580cfe562aa6b348 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.4E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS11105 f636ff29837b89d4580cfe562aa6b348 305 Gene3D G3DSA:3.40.190.10 176 264 7.3E-30 T 28-03-2018 AM393_RS11105 f636ff29837b89d4580cfe562aa6b348 305 Gene3D G3DSA:3.40.190.10 87 175 1.9E-22 T 28-03-2018 AM393_RS11105 f636ff29837b89d4580cfe562aa6b348 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 8.5E-21 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS11105 f636ff29837b89d4580cfe562aa6b348 305 Gene3D G3DSA:1.10.10.10 1 82 4.5E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS22670 692c9d0ad2411427395e4455b7e2d3da 165 Pfam PF01883 Iron-sulfur cluster assembly protein 14 72 2.8E-7 T 28-03-2018 IPR002744 MIP18 family-like AM393_RS22670 692c9d0ad2411427395e4455b7e2d3da 165 TIGRFAM TIGR02159 PA_CoA_Oxy4: phenylacetate-CoA oxygenase, PaaJ subunit 22 165 6.7E-67 T 28-03-2018 IPR011883 Phenylacetate-CoA oxygenase, PaaJ subunit AM393_RS22670 692c9d0ad2411427395e4455b7e2d3da 165 SUPERFAMILY SSF117916 13 105 1.9E-21 T 28-03-2018 IPR034904 Fe-S cluster assembly domain AM393_RS22670 692c9d0ad2411427395e4455b7e2d3da 165 Gene3D G3DSA:3.30.300.130 10 106 1.3E-17 T 28-03-2018 IPR034904 Fe-S cluster assembly domain AM393_RS14620 133d1b0d29bde99a61ebd369a67e8da9 275 Hamap MF_01153 Co-chaperone protein DjlA [djlA]. 3 275 38.403 T 28-03-2018 IPR023749 Co-chaperone DjlA GO:0051087 AM393_RS14620 133d1b0d29bde99a61ebd369a67e8da9 275 Gene3D G3DSA:1.10.3680.10 41 178 3.2E-25 T 28-03-2018 IPR029024 TerB-like AM393_RS14620 133d1b0d29bde99a61ebd369a67e8da9 275 PRINTS PR00625 DnaJ domain signature 254 274 2.2E-6 T 28-03-2018 IPR001623 DnaJ domain AM393_RS14620 133d1b0d29bde99a61ebd369a67e8da9 275 PRINTS PR00625 DnaJ domain signature 212 230 2.2E-6 T 28-03-2018 IPR001623 DnaJ domain AM393_RS14620 133d1b0d29bde99a61ebd369a67e8da9 275 PRINTS PR00625 DnaJ domain signature 230 245 2.2E-6 T 28-03-2018 IPR001623 DnaJ domain AM393_RS14620 133d1b0d29bde99a61ebd369a67e8da9 275 Pfam PF00226 DnaJ domain 213 271 7.6E-10 T 28-03-2018 IPR001623 DnaJ domain AM393_RS14620 133d1b0d29bde99a61ebd369a67e8da9 275 SUPERFAMILY SSF46565 131 271 1.05E-30 T 28-03-2018 IPR001623 DnaJ domain AM393_RS14620 133d1b0d29bde99a61ebd369a67e8da9 275 Pfam PF05099 Tellurite resistance protein TerB 45 170 2.0E-10 T 28-03-2018 IPR007791 Co-chaperone DjlA, N-terminal AM393_RS14620 133d1b0d29bde99a61ebd369a67e8da9 275 Gene3D G3DSA:1.10.287.110 196 274 3.3E-14 T 28-03-2018 IPR001623 DnaJ domain AM393_RS14620 133d1b0d29bde99a61ebd369a67e8da9 275 SMART SM00271 209 274 6.7E-16 T 28-03-2018 IPR001623 DnaJ domain AM393_RS08475 192d277286f3e83eaefbaf0a5b0504fc 187 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 8.7E-14 T 28-03-2018 AM393_RS08475 192d277286f3e83eaefbaf0a5b0504fc 187 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 8.7E-14 T 28-03-2018 AM393_RS08475 192d277286f3e83eaefbaf0a5b0504fc 187 PRINTS PR00096 Glutamine amidotransferase superfamily signature 164 177 8.7E-14 T 28-03-2018 AM393_RS08475 192d277286f3e83eaefbaf0a5b0504fc 187 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 187 2.7E-90 T 28-03-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AM393_RS08475 192d277286f3e83eaefbaf0a5b0504fc 187 Gene3D G3DSA:3.40.50.880 1 187 9.4E-58 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AM393_RS08475 192d277286f3e83eaefbaf0a5b0504fc 187 PRINTS PR00097 Anthranilate synthase component II signature 47 56 4.1E-37 T 28-03-2018 AM393_RS08475 192d277286f3e83eaefbaf0a5b0504fc 187 PRINTS PR00097 Anthranilate synthase component II signature 119 131 4.1E-37 T 28-03-2018 AM393_RS08475 192d277286f3e83eaefbaf0a5b0504fc 187 PRINTS PR00097 Anthranilate synthase component II signature 164 177 4.1E-37 T 28-03-2018 AM393_RS08475 192d277286f3e83eaefbaf0a5b0504fc 187 PRINTS PR00097 Anthranilate synthase component II signature 2 16 4.1E-37 T 28-03-2018 AM393_RS08475 192d277286f3e83eaefbaf0a5b0504fc 187 PRINTS PR00097 Anthranilate synthase component II signature 99 107 4.1E-37 T 28-03-2018 AM393_RS08475 192d277286f3e83eaefbaf0a5b0504fc 187 PRINTS PR00097 Anthranilate synthase component II signature 74 85 4.1E-37 T 28-03-2018 AM393_RS08475 192d277286f3e83eaefbaf0a5b0504fc 187 Pfam PF00117 Glutamine amidotransferase class-I 3 185 1.4E-54 T 28-03-2018 IPR017926 Glutamine amidotransferase AM393_RS08475 192d277286f3e83eaefbaf0a5b0504fc 187 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 3.8E-6 T 28-03-2018 AM393_RS08475 192d277286f3e83eaefbaf0a5b0504fc 187 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 3.8E-6 T 28-03-2018 AM393_RS08475 192d277286f3e83eaefbaf0a5b0504fc 187 SUPERFAMILY SSF52317 1 186 2.38E-56 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AM393_RS10955 19c29d559cd4b1d62c4d542e35cfeedb 300 SUPERFAMILY SSF160240 209 287 7.32E-25 T 28-03-2018 AM393_RS10955 19c29d559cd4b1d62c4d542e35cfeedb 300 Gene3D G3DSA:3.30.70.1350 207 290 3.4E-24 T 28-03-2018 IPR027470 Cation efflux protein, cytoplasmic domain AM393_RS10955 19c29d559cd4b1d62c4d542e35cfeedb 300 Hamap MF_01425 Ferrous-iron efflux pump FieF [fieF]. 1 300 63.727 T 28-03-2018 IPR023783 Cation efflux pump FieF GO:0006829|GO:0015684|GO:0016021|GO:0046873 AM393_RS10955 19c29d559cd4b1d62c4d542e35cfeedb 300 Pfam PF16916 Dimerisation domain of Zinc Transporter 210 286 1.8E-25 T 28-03-2018 IPR027470 Cation efflux protein, cytoplasmic domain AM393_RS10955 19c29d559cd4b1d62c4d542e35cfeedb 300 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 10 287 1.1E-76 T 28-03-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AM393_RS10955 19c29d559cd4b1d62c4d542e35cfeedb 300 Pfam PF01545 Cation efflux family 14 206 4.1E-46 T 28-03-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AM393_RS10955 19c29d559cd4b1d62c4d542e35cfeedb 300 Gene3D G3DSA:1.20.1510.10 8 206 1.1E-40 T 28-03-2018 AM393_RS10955 19c29d559cd4b1d62c4d542e35cfeedb 300 SUPERFAMILY SSF161111 8 207 2.09E-51 T 28-03-2018 AM393_RS14425 a20783cf21e75f439ceb7e548d5fe2fe 87 Gene3D G3DSA:1.20.58.110 1 87 2.2E-29 T 28-03-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM393_RS14425 a20783cf21e75f439ceb7e548d5fe2fe 87 SUPERFAMILY SSF46992 3 86 2.35E-31 T 28-03-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM393_RS14425 a20783cf21e75f439ceb7e548d5fe2fe 87 Pfam PF01649 Ribosomal protein S20 2 84 1.7E-27 T 28-03-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM393_RS14425 a20783cf21e75f439ceb7e548d5fe2fe 87 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 13 86 3.0E-36 T 28-03-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM393_RS14425 a20783cf21e75f439ceb7e548d5fe2fe 87 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 87 2.4E-34 T 28-03-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM393_RS14425 a20783cf21e75f439ceb7e548d5fe2fe 87 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 17.252 T 28-03-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM393_RS26565 4875bde500cb8494903a7dcba0de6ed9 248 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 170 241 3.7E-17 T 28-03-2018 IPR006260 TonB, C-terminal GO:0006810 AM393_RS26565 4875bde500cb8494903a7dcba0de6ed9 248 Pfam PF16031 TonB N-terminal region 36 167 3.8E-35 T 28-03-2018 AM393_RS26565 4875bde500cb8494903a7dcba0de6ed9 248 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 171 243 3.8E-20 T 28-03-2018 IPR006260 TonB, C-terminal GO:0006810 AM393_RS26565 4875bde500cb8494903a7dcba0de6ed9 248 SUPERFAMILY SSF74653 163 230 2.88E-19 T 28-03-2018 AM393_RS26565 4875bde500cb8494903a7dcba0de6ed9 248 Gene3D G3DSA:3.30.2420.10 174 247 3.3E-18 T 28-03-2018 AM393_RS26565 4875bde500cb8494903a7dcba0de6ed9 248 PRINTS PR01374 Gram-negative bacterial tonB protein signature 100 110 5.3E-38 T 28-03-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 AM393_RS26565 4875bde500cb8494903a7dcba0de6ed9 248 PRINTS PR01374 Gram-negative bacterial tonB protein signature 186 204 5.3E-38 T 28-03-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 AM393_RS26565 4875bde500cb8494903a7dcba0de6ed9 248 PRINTS PR01374 Gram-negative bacterial tonB protein signature 205 222 5.3E-38 T 28-03-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 AM393_RS26565 4875bde500cb8494903a7dcba0de6ed9 248 PRINTS PR01374 Gram-negative bacterial tonB protein signature 165 186 5.3E-38 T 28-03-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 AM393_RS05465 3039dd9b3dee41a2eddccd7459c479d9 338 Gene3D G3DSA:1.10.260.40 2 55 2.2E-22 T 28-03-2018 AM393_RS05465 3039dd9b3dee41a2eddccd7459c479d9 338 Gene3D G3DSA:3.40.50.2300 174 312 5.1E-42 T 28-03-2018 AM393_RS05465 3039dd9b3dee41a2eddccd7459c479d9 338 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 2.6E-7 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM393_RS05465 3039dd9b3dee41a2eddccd7459c479d9 338 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 2.6E-7 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM393_RS05465 3039dd9b3dee41a2eddccd7459c479d9 338 SMART SM00354 1 71 4.9E-37 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM393_RS05465 3039dd9b3dee41a2eddccd7459c479d9 338 SUPERFAMILY SSF53822 60 332 2.69E-85 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AM393_RS05465 3039dd9b3dee41a2eddccd7459c479d9 338 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 28-03-2018 AM393_RS05465 3039dd9b3dee41a2eddccd7459c479d9 338 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 2.9E-21 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM393_RS05465 3039dd9b3dee41a2eddccd7459c479d9 338 SUPERFAMILY SSF47413 1 59 2.25E-17 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM393_RS05465 3039dd9b3dee41a2eddccd7459c479d9 338 Pfam PF13377 Periplasmic binding protein-like domain 168 329 4.0E-38 T 28-03-2018 AM393_RS05465 3039dd9b3dee41a2eddccd7459c479d9 338 Gene3D G3DSA:3.40.50.2300 56 173 1.5E-31 T 28-03-2018 AM393_RS18095 5c703b6a328ee85651205e0264c522ae 413 SUPERFAMILY SSF50969 120 403 2.9E-7 T 28-03-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like AM393_RS18095 5c703b6a328ee85651205e0264c522ae 413 Gene3D G3DSA:2.130.10.10 6 411 1.8E-5 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 AM393_RS18095 5c703b6a328ee85651205e0264c522ae 413 Pfam PF08309 LVIVD repeat 119 137 2.4 T 28-03-2018 IPR013211 LVIVD AM393_RS18095 5c703b6a328ee85651205e0264c522ae 413 Pfam PF08309 LVIVD repeat 32 61 0.67 T 28-03-2018 IPR013211 LVIVD AM393_RS00020 484bcf8c9f1e42c93a46f666088699f6 297 Gene3D G3DSA:3.90.1580.10 24 297 1.5E-49 T 28-03-2018 AM393_RS00020 484bcf8c9f1e42c93a46f666088699f6 297 SUPERFAMILY SSF56436 40 253 2.45E-47 T 28-03-2018 IPR016187 C-type lectin fold AM393_RS00020 484bcf8c9f1e42c93a46f666088699f6 297 Pfam PF03781 Sulfatase-modifying factor enzyme 1 39 255 8.9E-37 T 28-03-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 AM393_RS11010 b5ae643ea4c23269e8e43ad0992fc170 386 SUPERFAMILY SSF53383 5 381 9.35E-119 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM393_RS11010 b5ae643ea4c23269e8e43ad0992fc170 386 TIGRFAM TIGR02080 O_succ_thio_ly: O-succinylhomoserine (thiol)-lyase 3 382 2.5E-210 T 28-03-2018 IPR011821 O-succinylhomoserine (thiol)-lyase KEGG: 00270+2.5.1.48|KEGG: 00450+2.5.1.48|KEGG: 00920+2.5.1.48|MetaCyc: PWY-801 AM393_RS11010 b5ae643ea4c23269e8e43ad0992fc170 386 Gene3D G3DSA:3.40.640.10 1 247 1.3E-55 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM393_RS11010 b5ae643ea4c23269e8e43ad0992fc170 386 Gene3D G3DSA:3.90.1150.10 248 386 2.7E-49 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM393_RS11010 b5ae643ea4c23269e8e43ad0992fc170 386 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 190 204 - T 28-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AM393_RS11010 b5ae643ea4c23269e8e43ad0992fc170 386 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 6 380 4.7E-142 T 28-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AM393_RS11010 b5ae643ea4c23269e8e43ad0992fc170 386 PIRSF PIRSF001434 1 384 1.4E-132 T 28-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AM393_RS07405 1d8420ba3b93f860ee6f6dc56c08c410 178 SUPERFAMILY SSF52317 1 170 3.51E-45 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AM393_RS07405 1d8420ba3b93f860ee6f6dc56c08c410 178 Gene3D G3DSA:3.40.50.880 1 173 1.4E-39 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AM393_RS07405 1d8420ba3b93f860ee6f6dc56c08c410 178 Pfam PF01965 DJ-1/PfpI family 3 167 2.0E-53 T 28-03-2018 IPR002818 DJ-1/PfpI AM393_RS07405 1d8420ba3b93f860ee6f6dc56c08c410 178 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 4 171 1.4E-64 T 28-03-2018 IPR006286 Peptidase C56, PfpI AM393_RS03985 46d8f61d0fa2aafc245bb3867f8a4f1b 182 Gene3D G3DSA:2.30.30.240 102 177 7.5E-23 T 28-03-2018 AM393_RS03985 46d8f61d0fa2aafc245bb3867f8a4f1b 182 Pfam PF01782 RimM N-terminal domain 16 96 3.4E-26 T 28-03-2018 IPR002676 RimM protein GO:0006364 AM393_RS03985 46d8f61d0fa2aafc245bb3867f8a4f1b 182 Pfam PF05239 PRC-barrel domain 104 169 6.2E-9 T 28-03-2018 IPR027275 PRC-barrel domain AM393_RS03985 46d8f61d0fa2aafc245bb3867f8a4f1b 182 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 14 182 5.9E-62 T 28-03-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 AM393_RS03985 46d8f61d0fa2aafc245bb3867f8a4f1b 182 SUPERFAMILY SSF50346 106 182 2.16E-19 T 28-03-2018 IPR011033 PRC-barrel-like AM393_RS03985 46d8f61d0fa2aafc245bb3867f8a4f1b 182 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 13 182 24.786 T 28-03-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 AM393_RS03985 46d8f61d0fa2aafc245bb3867f8a4f1b 182 SUPERFAMILY SSF50447 12 100 2.44E-25 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain AM393_RS03985 46d8f61d0fa2aafc245bb3867f8a4f1b 182 Gene3D G3DSA:2.40.30.60 12 100 1.5E-27 T 28-03-2018 IPR002676 RimM protein GO:0006364 AM393_RS02620 836c308d1c60f6514265f1d5b67d4976 556 Gene3D G3DSA:3.40.50.1220 217 366 1.4E-14 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AM393_RS02620 836c308d1c60f6514265f1d5b67d4976 556 SUPERFAMILY SSF52518 7 174 3.27E-31 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold AM393_RS02620 836c308d1c60f6514265f1d5b67d4976 556 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 9 140 8.7E-27 T 28-03-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 AM393_RS02620 836c308d1c60f6514265f1d5b67d4976 556 TIGRFAM TIGR00173 menD: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase 10 430 6.7E-137 T 28-03-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 AM393_RS02620 836c308d1c60f6514265f1d5b67d4976 556 Pfam PF16582 Middle domain of thiamine pyrophosphate 184 388 5.2E-83 T 28-03-2018 IPR032264 Menaquinone biosynthesis protein MenD, middle domain KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 AM393_RS02620 836c308d1c60f6514265f1d5b67d4976 556 Gene3D G3DSA:3.40.50.970 1 204 1.9E-54 T 28-03-2018 AM393_RS02620 836c308d1c60f6514265f1d5b67d4976 556 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 414 534 5.9E-11 T 28-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AM393_RS02620 836c308d1c60f6514265f1d5b67d4976 556 Hamap MF_01659 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [menD]. 4 553 32.666 T 28-03-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 AM393_RS02620 836c308d1c60f6514265f1d5b67d4976 556 SUPERFAMILY SSF52518 362 552 1.16E-35 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold AM393_RS02620 836c308d1c60f6514265f1d5b67d4976 556 Gene3D G3DSA:3.40.50.970 367 551 5.9E-24 T 28-03-2018 AM393_RS02620 836c308d1c60f6514265f1d5b67d4976 556 PIRSF PIRSF004983 1 556 2.8E-181 T 28-03-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 AM393_RS20605 d0b4743f138aed58bdb93632a03b5874 517 PIRSF PIRSF006281 2 517 7.7E-239 T 28-03-2018 IPR014438 Glucan biosynthesis, periplasmic, MdoG/D AM393_RS20605 d0b4743f138aed58bdb93632a03b5874 517 SUPERFAMILY SSF81296 403 516 1.96E-33 T 28-03-2018 IPR014756 Immunoglobulin E-set AM393_RS20605 d0b4743f138aed58bdb93632a03b5874 517 Pfam PF04349 Periplasmic glucan biosynthesis protein, MdoG 29 513 3.7E-198 T 28-03-2018 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal GO:0016051|GO:0042597 AM393_RS20605 d0b4743f138aed58bdb93632a03b5874 517 Hamap MF_01069 Glucans biosynthesis protein G [mdoG]. 12 515 62.682 T 28-03-2018 IPR023704 Glucan biosynthesis protein G AM393_RS20605 d0b4743f138aed58bdb93632a03b5874 517 SUPERFAMILY SSF74650 29 399 3.11E-164 T 28-03-2018 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 AM393_RS20605 d0b4743f138aed58bdb93632a03b5874 517 Gene3D G3DSA:2.60.40.10 404 517 2.0E-43 T 28-03-2018 IPR013783 Immunoglobulin-like fold AM393_RS20605 d0b4743f138aed58bdb93632a03b5874 517 Gene3D G3DSA:2.70.98.10 29 398 3.3E-167 T 28-03-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 AM393_RS03325 4a7fc276cbae600fb94276d4692ec9b6 198 SUPERFAMILY SSF55811 11 186 3.11E-51 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 AM393_RS03325 4a7fc276cbae600fb94276d4692ec9b6 198 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 7 186 3.7E-72 T 28-03-2018 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 Reactome: R-HSA-480985 AM393_RS03325 4a7fc276cbae600fb94276d4692ec9b6 198 Gene3D G3DSA:3.90.79.10 1 191 7.6E-38 T 28-03-2018 AM393_RS03325 4a7fc276cbae600fb94276d4692ec9b6 198 Pfam PF00293 NUDIX domain 45 163 5.3E-10 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AM393_RS15370 5e5eb3abdae41070d287da2f9122ef9c 341 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 259 285 0.23 T 28-03-2018 IPR001451 Hexapeptide repeat AM393_RS15370 5e5eb3abdae41070d287da2f9122ef9c 341 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 8 329 3.3E-130 T 28-03-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 AM393_RS15370 5e5eb3abdae41070d287da2f9122ef9c 341 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 225 253 - T 28-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AM393_RS15370 5e5eb3abdae41070d287da2f9122ef9c 341 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 130 158 - T 28-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AM393_RS15370 5e5eb3abdae41070d287da2f9122ef9c 341 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 144 4.1E-10 T 28-03-2018 IPR001451 Hexapeptide repeat AM393_RS15370 5e5eb3abdae41070d287da2f9122ef9c 341 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 145 179 3.7E-7 T 28-03-2018 IPR001451 Hexapeptide repeat AM393_RS15370 5e5eb3abdae41070d287da2f9122ef9c 341 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 222 255 3.6E-7 T 28-03-2018 IPR001451 Hexapeptide repeat AM393_RS15370 5e5eb3abdae41070d287da2f9122ef9c 341 SUPERFAMILY SSF51161 33 316 9.89E-89 T 28-03-2018 IPR011004 Trimeric LpxA-like AM393_RS15370 5e5eb3abdae41070d287da2f9122ef9c 341 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 9 326 36.014 T 28-03-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 AM393_RS15370 5e5eb3abdae41070d287da2f9122ef9c 341 Gene3D G3DSA:2.160.10.10 139 309 3.0E-44 T 28-03-2018 AM393_RS15370 5e5eb3abdae41070d287da2f9122ef9c 341 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 22 88 2.8E-22 T 28-03-2018 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 AM393_RS15370 5e5eb3abdae41070d287da2f9122ef9c 341 Gene3D G3DSA:2.160.10.10 23 138 1.1E-20 T 28-03-2018 AM393_RS17485 e6e9d1cd54d93c5fd2fecc9cbc451add 372 Gene3D G3DSA:3.40.50.1980 20 164 1.1E-18 T 28-03-2018 AM393_RS17485 e6e9d1cd54d93c5fd2fecc9cbc451add 372 Pfam PF01497 Periplasmic binding protein 103 315 2.4E-23 T 28-03-2018 IPR002491 ABC transporter periplasmic binding domain GO:0005488 AM393_RS17485 e6e9d1cd54d93c5fd2fecc9cbc451add 372 SUPERFAMILY SSF53807 31 360 2.83E-59 T 28-03-2018 AM393_RS17485 e6e9d1cd54d93c5fd2fecc9cbc451add 372 Gene3D G3DSA:3.40.50.1980 165 347 8.6E-41 T 28-03-2018 AM393_RS17375 a2054b3d469ffada7d127c38ba7ff9dc 505 Pfam PF01336 OB-fold nucleic acid binding domain 68 146 2.3E-15 T 28-03-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 AM393_RS17375 a2054b3d469ffada7d127c38ba7ff9dc 505 SUPERFAMILY SSF55681 162 502 1.78E-121 T 28-03-2018 AM393_RS17375 a2054b3d469ffada7d127c38ba7ff9dc 505 Gene3D G3DSA:3.30.930.10 156 501 5.6E-104 T 28-03-2018 AM393_RS17375 a2054b3d469ffada7d127c38ba7ff9dc 505 PIRSF PIRSF039101 1 505 7.2E-205 T 28-03-2018 IPR034762 Bacterial/eukaryotic lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AM393_RS17375 a2054b3d469ffada7d127c38ba7ff9dc 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 199 209 1.5E-39 T 28-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AM393_RS17375 a2054b3d469ffada7d127c38ba7ff9dc 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 262 279 1.5E-39 T 28-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AM393_RS17375 a2054b3d469ffada7d127c38ba7ff9dc 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 215 231 1.5E-39 T 28-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AM393_RS17375 a2054b3d469ffada7d127c38ba7ff9dc 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 244 257 1.5E-39 T 28-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AM393_RS17375 a2054b3d469ffada7d127c38ba7ff9dc 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 386 402 1.5E-39 T 28-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AM393_RS17375 a2054b3d469ffada7d127c38ba7ff9dc 505 Pfam PF00152 tRNA synthetases class II (D, K and N) 162 501 6.0E-84 T 28-03-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM393_RS17375 a2054b3d469ffada7d127c38ba7ff9dc 505 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 21 505 45.357 T 28-03-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AM393_RS17375 a2054b3d469ffada7d127c38ba7ff9dc 505 SUPERFAMILY SSF50249 13 155 5.88E-47 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM393_RS17375 a2054b3d469ffada7d127c38ba7ff9dc 505 Gene3D G3DSA:2.40.50.140 15 154 2.0E-40 T 28-03-2018 AM393_RS17375 a2054b3d469ffada7d127c38ba7ff9dc 505 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 14 505 3.1E-237 T 28-03-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AM393_RS05885 0f12db4778d3aa38efb0de3669d8b5a8 219 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 15 216 6.9E-73 T 28-03-2018 IPR005744 Hly-III GO:0016021|GO:0019835 AM393_RS05885 0f12db4778d3aa38efb0de3669d8b5a8 219 Pfam PF03006 Haemolysin-III related 12 209 3.8E-39 T 28-03-2018 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 AM393_RS00675 a330a79f1c84625a3998ec879de1b31a 250 SUPERFAMILY SSF52540 4 212 1.02E-52 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS00675 a330a79f1c84625a3998ec879de1b31a 250 Gene3D G3DSA:3.40.50.300 1 224 8.1E-54 T 28-03-2018 AM393_RS00675 a330a79f1c84625a3998ec879de1b31a 250 SMART SM00382 29 199 2.8E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS00675 a330a79f1c84625a3998ec879de1b31a 250 Pfam PF00005 ABC transporter 20 149 1.6E-28 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS02695 8136da8c043058956eaa91c4626ae372 224 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 148 164 - T 28-03-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM393_RS02695 8136da8c043058956eaa91c4626ae372 224 SUPERFAMILY SSF56770 43 189 1.96E-64 T 28-03-2018 AM393_RS02695 8136da8c043058956eaa91c4626ae372 224 Gene3D G3DSA:3.40.50.700 35 209 1.0E-38 T 28-03-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM393_RS02695 8136da8c043058956eaa91c4626ae372 224 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 68 174 3.6E-22 T 28-03-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM393_RS02695 8136da8c043058956eaa91c4626ae372 224 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 27 181 42.233 T 28-03-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM393_RS02695 8136da8c043058956eaa91c4626ae372 224 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 46 182 1.8E-69 T 28-03-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM393_RS00755 c2412438ba7656de03102082d6f7a1a7 379 Gene3D G3DSA:1.50.10.10 1 379 1.1E-76 T 28-03-2018 AM393_RS00755 c2412438ba7656de03102082d6f7a1a7 379 Pfam PF07470 Glycosyl Hydrolase Family 88 38 377 5.0E-107 T 28-03-2018 IPR010905 Glycosyl hydrolase, family 88 AM393_RS00755 c2412438ba7656de03102082d6f7a1a7 379 SUPERFAMILY SSF48208 33 376 2.15E-87 T 28-03-2018 IPR008928 Six-hairpin glycosidase-like GO:0003824 AM393_RS10885 e0961bf58e16fc1a5289411974e863df 503 Pfam PF00005 ABC transporter 23 174 3.5E-31 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS10885 e0961bf58e16fc1a5289411974e863df 503 Pfam PF00005 ABC transporter 275 427 1.4E-21 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS10885 e0961bf58e16fc1a5289411974e863df 503 Gene3D G3DSA:3.40.50.300 2 247 6.2E-48 T 28-03-2018 AM393_RS10885 e0961bf58e16fc1a5289411974e863df 503 SUPERFAMILY SSF52540 247 485 4.15E-48 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS10885 e0961bf58e16fc1a5289411974e863df 503 SMART SM00382 282 476 1.7E-7 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS10885 e0961bf58e16fc1a5289411974e863df 503 SMART SM00382 32 228 9.2E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS10885 e0961bf58e16fc1a5289411974e863df 503 ProSitePatterns PS00211 ABC transporters family signature. 400 414 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS10885 e0961bf58e16fc1a5289411974e863df 503 Gene3D G3DSA:3.40.50.300 248 495 6.6E-39 T 28-03-2018 AM393_RS10885 e0961bf58e16fc1a5289411974e863df 503 SUPERFAMILY SSF52540 6 234 1.16E-54 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS13555 e4700f57074e659de39efb03da9bc096 212 Gene3D G3DSA:3.40.1800.10 117 207 5.8E-12 T 28-03-2018 AM393_RS13555 e4700f57074e659de39efb03da9bc096 212 Pfam PF01844 HNH endonuclease 139 195 4.0E-8 T 28-03-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 AM393_RS26445 482f2352b0b5ae1c63de5568b4ef5671 62 Pfam PF10636 Hemin uptake protein hemP 27 62 3.3E-17 T 28-03-2018 IPR019600 Hemin uptake protein HemP AM393_RS26445 482f2352b0b5ae1c63de5568b4ef5671 62 Gene3D G3DSA:2.10.70.10 26 62 1.5E-17 T 28-03-2018 AM393_RS26070 37d78aa4935ead41baee63a5cf33ce3c 410 Gene3D G3DSA:1.20.1250.20 7 199 4.0E-29 T 28-03-2018 AM393_RS26070 37d78aa4935ead41baee63a5cf33ce3c 410 SUPERFAMILY SSF103473 20 404 3.66E-47 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS26070 37d78aa4935ead41baee63a5cf33ce3c 410 ProSitePatterns PS00216 Sugar transport proteins signature 1. 71 88 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM393_RS26070 37d78aa4935ead41baee63a5cf33ce3c 410 Pfam PF07690 Major Facilitator Superfamily 26 356 1.3E-32 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS26070 37d78aa4935ead41baee63a5cf33ce3c 410 Gene3D G3DSA:1.20.1250.20 208 407 2.7E-10 T 28-03-2018 AM393_RS02745 b14fe11efa0d41fb5376e92a46fb4508 400 Gene3D G3DSA:3.30.420.40 5 198 8.9E-67 T 28-03-2018 AM393_RS02745 b14fe11efa0d41fb5376e92a46fb4508 400 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 206 223 - T 28-03-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AM393_RS02745 b14fe11efa0d41fb5376e92a46fb4508 400 TIGRFAM TIGR00016 ackA: acetate kinase 1 399 1.5E-186 T 28-03-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AM393_RS02745 b14fe11efa0d41fb5376e92a46fb4508 400 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 6 17 - T 28-03-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AM393_RS02745 b14fe11efa0d41fb5376e92a46fb4508 400 Hamap MF_00020 Acetate kinase [ackA]. 1 400 185.615 T 28-03-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AM393_RS02745 b14fe11efa0d41fb5376e92a46fb4508 400 Pfam PF00871 Acetokinase family 6 393 1.4E-176 T 28-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AM393_RS02745 b14fe11efa0d41fb5376e92a46fb4508 400 Gene3D G3DSA:3.30.420.40 199 400 2.6E-76 T 28-03-2018 AM393_RS02745 b14fe11efa0d41fb5376e92a46fb4508 400 SUPERFAMILY SSF53067 160 398 9.07E-84 T 28-03-2018 AM393_RS02745 b14fe11efa0d41fb5376e92a46fb4508 400 PIRSF PIRSF000722 2 400 1.0E-142 T 28-03-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AM393_RS02745 b14fe11efa0d41fb5376e92a46fb4508 400 PRINTS PR00471 Acetate kinase family signature 6 17 3.0E-48 T 28-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AM393_RS02745 b14fe11efa0d41fb5376e92a46fb4508 400 PRINTS PR00471 Acetate kinase family signature 325 341 3.0E-48 T 28-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AM393_RS02745 b14fe11efa0d41fb5376e92a46fb4508 400 PRINTS PR00471 Acetate kinase family signature 302 315 3.0E-48 T 28-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AM393_RS02745 b14fe11efa0d41fb5376e92a46fb4508 400 PRINTS PR00471 Acetate kinase family signature 176 189 3.0E-48 T 28-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AM393_RS02745 b14fe11efa0d41fb5376e92a46fb4508 400 PRINTS PR00471 Acetate kinase family signature 206 227 3.0E-48 T 28-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AM393_RS02745 b14fe11efa0d41fb5376e92a46fb4508 400 PRINTS PR00471 Acetate kinase family signature 380 392 3.0E-48 T 28-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AM393_RS02745 b14fe11efa0d41fb5376e92a46fb4508 400 SUPERFAMILY SSF53067 4 199 3.11E-62 T 28-03-2018 AM393_RS15465 62a6e233fb112bf262d995caf8d99147 271 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 14 271 3.7E-149 T 28-03-2018 IPR004872 Lipoprotein NlpA family AM393_RS15465 62a6e233fb112bf262d995caf8d99147 271 SUPERFAMILY SSF53850 33 271 1.59E-84 T 28-03-2018 AM393_RS15465 62a6e233fb112bf262d995caf8d99147 271 Pfam PF03180 NLPA lipoprotein 33 271 8.6E-101 T 28-03-2018 IPR004872 Lipoprotein NlpA family AM393_RS15465 62a6e233fb112bf262d995caf8d99147 271 Gene3D G3DSA:3.40.190.10 126 271 7.0E-50 T 28-03-2018 AM393_RS15465 62a6e233fb112bf262d995caf8d99147 271 Gene3D G3DSA:3.40.190.10 32 125 2.4E-21 T 28-03-2018 AM393_RS15465 62a6e233fb112bf262d995caf8d99147 271 PIRSF PIRSF002854 1 271 2.5E-107 T 28-03-2018 IPR004872 Lipoprotein NlpA family AM393_RS25265 b60db173677b6cd1f0c89deee538f2c4 198 TIGRFAM TIGR00477 tehB: tellurite resistance protein TehB 2 196 5.1E-97 T 28-03-2018 IPR004537 Tellurite resistance methyltransferase, TehB GO:0005737|GO:0008757|GO:0046690 AM393_RS25265 b60db173677b6cd1f0c89deee538f2c4 198 Pfam PF03848 Tellurite resistance protein TehB 3 193 1.5E-97 T 28-03-2018 IPR015985 Tellurite resistance methyltransferase TehB-like domain AM393_RS25265 b60db173677b6cd1f0c89deee538f2c4 198 Gene3D G3DSA:3.40.50.150 1 197 1.1E-31 T 28-03-2018 AM393_RS25265 b60db173677b6cd1f0c89deee538f2c4 198 SUPERFAMILY SSF53335 12 197 2.17E-33 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM393_RS14365 831cf28b6afbf2f3f03419fa8d1a1fe8 257 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 255 38.63 T 28-03-2018 IPR005583 Peroxide stress protein YaaA AM393_RS14365 831cf28b6afbf2f3f03419fa8d1a1fe8 257 Pfam PF03883 Peroxide stress protein YaaA 1 243 2.4E-91 T 28-03-2018 IPR005583 Peroxide stress protein YaaA AM393_RS06050 2ac0380ec562c066fcf241b520df4316 254 Gene3D G3DSA:3.40.50.720 1 126 9.4E-10 T 28-03-2018 AM393_RS06050 2ac0380ec562c066fcf241b520df4316 254 SUPERFAMILY SSF55347 116 229 2.03E-28 T 28-03-2018 AM393_RS06050 2ac0380ec562c066fcf241b520df4316 254 SUPERFAMILY SSF51735 1 145 3.34E-18 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS06050 2ac0380ec562c066fcf241b520df4316 254 Pfam PF01958 Domain of unknown function DUF108 160 247 1.1E-29 T 28-03-2018 IPR002811 Aspartate dehydrogenase GO:0006742|GO:0016491|GO:0019363|GO:0055114 KEGG: 00760+1.4.1.21 AM393_RS06050 2ac0380ec562c066fcf241b520df4316 254 Gene3D G3DSA:3.30.360.10 127 229 6.6E-34 T 28-03-2018 AM393_RS06050 2ac0380ec562c066fcf241b520df4316 254 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 8 106 7.5E-12 T 28-03-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 AM393_RS06050 2ac0380ec562c066fcf241b520df4316 254 Hamap MF_01265 Probable L-aspartate dehydrogenase [nadX]. 1 254 29.453 T 28-03-2018 IPR020626 L-aspartate dehydrogenase, prokaryotic GO:0009435|GO:0033735|GO:0055114 KEGG: 00760+1.4.1.21 AM393_RS06050 2ac0380ec562c066fcf241b520df4316 254 PIRSF PIRSF005227 1 254 8.7E-67 T 28-03-2018 IPR011182 L-aspartate dehydrogenase GO:0009435|GO:0033735|GO:0055114 KEGG: 00760+1.4.1.21 AM393_RS09320 7e9eee21c2b0c21f643529a64415fcbd 193 Gene3D G3DSA:1.10.340.30 1 182 1.8E-84 T 28-03-2018 AM393_RS09320 7e9eee21c2b0c21f643529a64415fcbd 193 SUPERFAMILY SSF48150 1 184 2.04E-81 T 28-03-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 AM393_RS09320 7e9eee21c2b0c21f643529a64415fcbd 193 Pfam PF03352 Methyladenine glycosylase 6 182 5.5E-81 T 28-03-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 AM393_RS09320 7e9eee21c2b0c21f643529a64415fcbd 193 TIGRFAM TIGR00624 tag: DNA-3-methyladenine glycosylase I 2 181 4.1E-88 T 28-03-2018 IPR004597 DNA-3-methyladenine glycosylase I GO:0006284|GO:0008725 AM393_RS15480 d494d46b79e2fecd7f48e6abd2720969 188 TIGRFAM TIGR00213 GmhB_yaeD: D,D-heptose 1,7-bisphosphate phosphatase 6 180 2.0E-97 T 28-03-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 AM393_RS15480 d494d46b79e2fecd7f48e6abd2720969 188 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 7 151 1.6E-38 T 28-03-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 AM393_RS15480 d494d46b79e2fecd7f48e6abd2720969 188 Pfam PF13242 HAD-hyrolase-like 109 179 3.8E-13 T 28-03-2018 AM393_RS15480 d494d46b79e2fecd7f48e6abd2720969 188 PIRSF PIRSF004682 1 188 9.3E-68 T 28-03-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 AM393_RS15480 d494d46b79e2fecd7f48e6abd2720969 188 SUPERFAMILY SSF56784 3 185 3.72E-54 T 28-03-2018 IPR023214 HAD-like domain AM393_RS15480 d494d46b79e2fecd7f48e6abd2720969 188 Gene3D G3DSA:3.40.50.1000 4 188 4.9E-34 T 28-03-2018 IPR023214 HAD-like domain AM393_RS15480 d494d46b79e2fecd7f48e6abd2720969 188 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 6 153 6.5E-39 T 28-03-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 AM393_RS03955 6c73513b4ea2e64272f98daa38fb7f31 407 Gene3D G3DSA:3.30.70.270 236 405 3.9E-45 T 28-03-2018 AM393_RS03955 6c73513b4ea2e64272f98daa38fb7f31 407 Pfam PF00990 Diguanylate cyclase, GGDEF domain 249 401 8.1E-44 T 28-03-2018 IPR000160 GGDEF domain AM393_RS03955 6c73513b4ea2e64272f98daa38fb7f31 407 Pfam PF17152 Periplasmic sensor domain 44 144 2.5E-30 T 28-03-2018 IPR033417 Periplasmic sensor domain CHASE8 AM393_RS03955 6c73513b4ea2e64272f98daa38fb7f31 407 SMART SM00267 237 405 1.0E-52 T 28-03-2018 IPR000160 GGDEF domain AM393_RS03955 6c73513b4ea2e64272f98daa38fb7f31 407 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 246 401 6.4E-33 T 28-03-2018 IPR000160 GGDEF domain AM393_RS03955 6c73513b4ea2e64272f98daa38fb7f31 407 SUPERFAMILY SSF55073 253 401 6.43E-36 T 28-03-2018 IPR029787 Nucleotide cyclase AM393_RS13325 483bea30606fab7059b0fc9c4f638878 273 SUPERFAMILY SSF51658 2 268 5.39E-62 T 28-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AM393_RS13325 483bea30606fab7059b0fc9c4f638878 273 PIRSF PIRSF036778 1 273 5.3E-92 T 28-03-2018 IPR014621 Uncharacterised conserved protein UCP036778, sugar epimerase-type AM393_RS13325 483bea30606fab7059b0fc9c4f638878 273 Pfam PF01261 Xylose isomerase-like TIM barrel 24 201 4.9E-12 T 28-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AM393_RS13325 483bea30606fab7059b0fc9c4f638878 273 Gene3D G3DSA:3.20.20.150 1 270 5.0E-33 T 28-03-2018 AM393_RS20240 09b103ea106fbdf7840daa48b64a4b22 148 PIRSF PIRSF028777 1 139 1.9E-55 T 28-03-2018 IPR031308 Uncharacterised conserved protein UCP028777 AM393_RS20240 09b103ea106fbdf7840daa48b64a4b22 148 Pfam PF03733 Inner membrane component domain 4 53 9.2E-10 T 28-03-2018 IPR005185 Inner membrane component domain AM393_RS20240 09b103ea106fbdf7840daa48b64a4b22 148 Pfam PF03733 Inner membrane component domain 77 127 2.6E-18 T 28-03-2018 IPR005185 Inner membrane component domain AM393_RS15615 c6ad339c0e9d8ea1a59789606f7de75d 412 Pfam PF03116 NQR2, RnfD, RnfE family 41 405 1.5E-107 T 28-03-2018 IPR004338 NADH-quinone reductase NQR2/RnfD GO:0006810|GO:0016020 AM393_RS15615 c6ad339c0e9d8ea1a59789606f7de75d 412 TIGRFAM TIGR01937 nqrB: NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit 3 408 1.7E-194 T 28-03-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 AM393_RS15615 c6ad339c0e9d8ea1a59789606f7de75d 412 Hamap MF_00426 Na(+)-translocating NADH-quinone reductase subunit B [nqrB]. 2 412 37.078 T 28-03-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 AM393_RS15615 c6ad339c0e9d8ea1a59789606f7de75d 412 PIRSF PIRSF016055 1 412 1.9E-200 T 28-03-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 AM393_RS14175 cbb6acb082c48f1d33a8aee447ac8b7e 148 SUPERFAMILY SSF55729 3 146 1.77E-31 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM393_RS14175 cbb6acb082c48f1d33a8aee447ac8b7e 148 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 11 142 5.8E-45 T 28-03-2018 IPR006464 N-acetyltransferase RimI/Ard1 GO:0006474|GO:0016407 AM393_RS14175 cbb6acb082c48f1d33a8aee447ac8b7e 148 Gene3D G3DSA:3.40.630.30 1 148 2.7E-31 T 28-03-2018 AM393_RS14175 cbb6acb082c48f1d33a8aee447ac8b7e 148 Pfam PF00583 Acetyltransferase (GNAT) family 17 120 3.3E-17 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AM393_RS03615 b6a946e2ae406916ac2a0d76c3bf27cd 128 SUPERFAMILY SSF82649 1 125 2.22E-49 T 28-03-2018 AM393_RS03615 b6a946e2ae406916ac2a0d76c3bf27cd 128 TIGRFAM TIGR01999 iscU: FeS cluster assembly scaffold IscU 3 126 2.0E-71 T 28-03-2018 IPR011339 ISC system FeS cluster assembly, IscU scaffold GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 AM393_RS03615 b6a946e2ae406916ac2a0d76c3bf27cd 128 Pfam PF01592 NifU-like N terminal domain 2 126 2.2E-57 T 28-03-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 AM393_RS03615 b6a946e2ae406916ac2a0d76c3bf27cd 128 Gene3D G3DSA:3.90.1010.10 1 128 4.0E-53 T 28-03-2018 AM393_RS22555 3477f3e123558857caaaf90d333da725 311 PIRSF PIRSF004976 2 270 4.4E-76 T 28-03-2018 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type GO:0008033 Reactome: R-HSA-6782315 AM393_RS22555 3477f3e123558857caaaf90d333da725 311 SUPERFAMILY SSF52402 17 235 3.31E-54 T 28-03-2018 AM393_RS22555 3477f3e123558857caaaf90d333da725 311 Hamap MF_01850 tRNA 2-thiocytidine biosynthesis protein TtcA [ttcA]. 2 271 57.514 T 28-03-2018 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA GO:0008033 AM393_RS22555 3477f3e123558857caaaf90d333da725 311 Pfam PF01171 PP-loop family 42 205 1.8E-13 T 28-03-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 AM393_RS22555 3477f3e123558857caaaf90d333da725 311 Gene3D G3DSA:3.40.50.620 6 246 5.4E-39 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM393_RS18365 990454102706c79c266c971005a12813 597 SMART SM00912 30 150 3.9E-40 T 28-03-2018 IPR008638 Filamentous haemagglutinin, N-terminal AM393_RS18365 990454102706c79c266c971005a12813 597 Gene3D G3DSA:2.160.20.10 17 315 1.3E-55 T 28-03-2018 IPR012334 Pectin lyase fold AM393_RS18365 990454102706c79c266c971005a12813 597 Gene3D G3DSA:2.160.20.10 379 553 3.8E-9 T 28-03-2018 IPR012334 Pectin lyase fold AM393_RS18365 990454102706c79c266c971005a12813 597 Pfam PF05860 haemagglutination activity domain 29 148 4.1E-30 T 28-03-2018 IPR008638 Filamentous haemagglutinin, N-terminal AM393_RS18365 990454102706c79c266c971005a12813 597 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 48 144 4.0E-22 T 28-03-2018 IPR008638 Filamentous haemagglutinin, N-terminal AM393_RS18365 990454102706c79c266c971005a12813 597 SUPERFAMILY SSF51126 309 323 6.59E-51 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor AM393_RS18365 990454102706c79c266c971005a12813 597 SUPERFAMILY SSF51126 23 280 6.59E-51 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor AM393_RS06740 bbd97c6be9f2dfbcb7a3e6cebc5941a1 752 Gene3D G3DSA:3.30.1360.40 235 328 2.5E-23 T 28-03-2018 IPR024946 Arginine repressor C-terminal-like domain Reactome: R-HSA-4615885 AM393_RS06740 bbd97c6be9f2dfbcb7a3e6cebc5941a1 752 SUPERFAMILY SSF56719 28 479 6.54E-154 T 28-03-2018 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 AM393_RS06740 bbd97c6be9f2dfbcb7a3e6cebc5941a1 752 SUPERFAMILY SSF101904 494 735 6.15E-50 T 28-03-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal AM393_RS06740 bbd97c6be9f2dfbcb7a3e6cebc5941a1 752 Gene3D G3DSA:1.10.268.10 341 480 1.1E-45 T 28-03-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM393_RS06740 bbd97c6be9f2dfbcb7a3e6cebc5941a1 752 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 641 692 6.7E-8 T 28-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AM393_RS06740 bbd97c6be9f2dfbcb7a3e6cebc5941a1 752 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 593 630 4.5E-4 T 28-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AM393_RS06740 bbd97c6be9f2dfbcb7a3e6cebc5941a1 752 Gene3D G3DSA:2.120.10.90 492 738 1.8E-43 T 28-03-2018 AM393_RS06740 bbd97c6be9f2dfbcb7a3e6cebc5941a1 752 Gene3D G3DSA:3.90.199.10 31 212 2.8E-74 T 28-03-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 AM393_RS06740 bbd97c6be9f2dfbcb7a3e6cebc5941a1 752 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 1 738 34.259 T 28-03-2018 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AM393_RS06740 bbd97c6be9f2dfbcb7a3e6cebc5941a1 752 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 5 738 0.0 T 28-03-2018 AM393_RS06740 bbd97c6be9f2dfbcb7a3e6cebc5941a1 752 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 29 465 6.4E-134 T 28-03-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM393_RS06740 bbd97c6be9f2dfbcb7a3e6cebc5941a1 752 SMART SM00434 8 458 6.1E-241 T 28-03-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM393_RS04080 ec22db7c374805b6786c5b118de9b0fb 1050 Gene3D G3DSA:3.30.70.1430 578 678 2.0E-15 T 28-03-2018 AM393_RS04080 ec22db7c374805b6786c5b118de9b0fb 1050 Gene3D G3DSA:3.30.70.1440 679 773 1.9E-21 T 28-03-2018 AM393_RS04080 ec22db7c374805b6786c5b118de9b0fb 1050 Gene3D G3DSA:1.20.1640.10 278 501 5.2E-50 T 28-03-2018 AM393_RS04080 ec22db7c374805b6786c5b118de9b0fb 1050 Gene3D G3DSA:1.20.1640.10 853 1038 1.6E-38 T 28-03-2018 AM393_RS04080 ec22db7c374805b6786c5b118de9b0fb 1050 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 3 1043 0.0 T 28-03-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 AM393_RS04080 ec22db7c374805b6786c5b118de9b0fb 1050 SUPERFAMILY SSF82714 729 815 1.57E-20 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM393_RS04080 ec22db7c374805b6786c5b118de9b0fb 1050 Gene3D G3DSA:3.30.2090.10 183 277 2.9E-19 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM393_RS04080 ec22db7c374805b6786c5b118de9b0fb 1050 PRINTS PR00702 Acriflavin resistance protein family signature 394 418 1.9E-91 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS04080 ec22db7c374805b6786c5b118de9b0fb 1050 PRINTS PR00702 Acriflavin resistance protein family signature 562 579 1.9E-91 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS04080 ec22db7c374805b6786c5b118de9b0fb 1050 PRINTS PR00702 Acriflavin resistance protein family signature 339 362 1.9E-91 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS04080 ec22db7c374805b6786c5b118de9b0fb 1050 PRINTS PR00702 Acriflavin resistance protein family signature 366 387 1.9E-91 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS04080 ec22db7c374805b6786c5b118de9b0fb 1050 PRINTS PR00702 Acriflavin resistance protein family signature 447 470 1.9E-91 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS04080 ec22db7c374805b6786c5b118de9b0fb 1050 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.9E-91 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS04080 ec22db7c374805b6786c5b118de9b0fb 1050 PRINTS PR00702 Acriflavin resistance protein family signature 472 495 1.9E-91 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS04080 ec22db7c374805b6786c5b118de9b0fb 1050 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.9E-91 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS04080 ec22db7c374805b6786c5b118de9b0fb 1050 PRINTS PR00702 Acriflavin resistance protein family signature 631 645 1.9E-91 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS04080 ec22db7c374805b6786c5b118de9b0fb 1050 SUPERFAMILY SSF82866 299 499 4.84E-50 T 28-03-2018 AM393_RS04080 ec22db7c374805b6786c5b118de9b0fb 1050 Gene3D G3DSA:3.30.70.1430 40 142 1.3E-26 T 28-03-2018 AM393_RS04080 ec22db7c374805b6786c5b118de9b0fb 1050 SUPERFAMILY SSF82693 41 134 1.91E-26 T 28-03-2018 AM393_RS04080 ec22db7c374805b6786c5b118de9b0fb 1050 SUPERFAMILY SSF82693 277 333 3.84E-26 T 28-03-2018 AM393_RS04080 ec22db7c374805b6786c5b118de9b0fb 1050 SUPERFAMILY SSF82693 139 184 3.84E-26 T 28-03-2018 AM393_RS04080 ec22db7c374805b6786c5b118de9b0fb 1050 SUPERFAMILY SSF82693 575 678 2.41E-21 T 28-03-2018 AM393_RS04080 ec22db7c374805b6786c5b118de9b0fb 1050 Pfam PF00873 AcrB/AcrD/AcrF family 3 1034 0.0 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM393_RS04080 ec22db7c374805b6786c5b118de9b0fb 1050 Gene3D G3DSA:3.30.70.1320 774 852 9.1E-8 T 28-03-2018 AM393_RS04080 ec22db7c374805b6786c5b118de9b0fb 1050 SUPERFAMILY SSF82714 185 275 6.15E-22 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM393_RS04080 ec22db7c374805b6786c5b118de9b0fb 1050 SUPERFAMILY SSF82866 813 1037 5.1E-43 T 28-03-2018 AM393_RS11880 c0e27eb22294fe2a7a703c6a4423e145 434 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 8 255 1.3E-121 T 28-03-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 AM393_RS11880 c0e27eb22294fe2a7a703c6a4423e145 434 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 256 434 1.6E-91 T 28-03-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 AM393_RS11880 c0e27eb22294fe2a7a703c6a4423e145 434 PIRSF PIRSF001362 1 434 4.8E-230 T 28-03-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 AM393_RS11880 c0e27eb22294fe2a7a703c6a4423e145 434 Gene3D G3DSA:3.20.20.60 1 417 1.0E-155 T 28-03-2018 AM393_RS11880 c0e27eb22294fe2a7a703c6a4423e145 434 Pfam PF00463 Isocitrate lyase family 257 434 5.9E-51 T 28-03-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 AM393_RS11880 c0e27eb22294fe2a7a703c6a4423e145 434 Pfam PF00463 Isocitrate lyase family 8 255 4.9E-62 T 28-03-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 AM393_RS11880 c0e27eb22294fe2a7a703c6a4423e145 434 SUPERFAMILY SSF51621 4 417 5.83E-158 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AM393_RS11880 c0e27eb22294fe2a7a703c6a4423e145 434 ProSitePatterns PS00161 Isocitrate lyase signature. 193 198 - T 28-03-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824|GO:0008152 AM393_RS05935 67ea0f4bdcbe50c7f6b1bf619b0dc300 129 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 5 127 43.031 T 28-03-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 AM393_RS05935 67ea0f4bdcbe50c7f6b1bf619b0dc300 129 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 49 78 - T 28-03-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 AM393_RS05935 67ea0f4bdcbe50c7f6b1bf619b0dc300 129 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 3 129 6.0E-59 T 28-03-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 AM393_RS05935 67ea0f4bdcbe50c7f6b1bf619b0dc300 129 Gene3D G3DSA:2.40.50.100 6 129 1.6E-50 T 28-03-2018 AM393_RS05935 67ea0f4bdcbe50c7f6b1bf619b0dc300 129 SUPERFAMILY SSF51230 4 128 1.26E-46 T 28-03-2018 IPR011053 Single hybrid motif AM393_RS05935 67ea0f4bdcbe50c7f6b1bf619b0dc300 129 Pfam PF01597 Glycine cleavage H-protein 8 128 1.0E-49 T 28-03-2018 IPR033753 Glycine cleavage system H-protein/Simiate AM393_RS28390 46fc1aacd7733e3a46c4b5f8caa2d37f 72 Pfam PF07362 Post-segregation antitoxin CcdA 2 72 1.0E-23 T 28-03-2018 IPR009956 Post-segregation antitoxin CcdA AM393_RS14655 b109738baedd99c8cd6ca88d73b6a319 968 SUPERFAMILY SSF52540 480 647 3.31E-43 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS14655 b109738baedd99c8cd6ca88d73b6a319 968 SUPERFAMILY SSF52540 273 337 3.31E-43 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS14655 b109738baedd99c8cd6ca88d73b6a319 968 Gene3D G3DSA:3.40.50.10810 130 357 8.7E-27 T 28-03-2018 AM393_RS14655 b109738baedd99c8cd6ca88d73b6a319 968 SMART SM00490 517 601 3.9E-18 T 28-03-2018 IPR001650 Helicase, C-terminal AM393_RS14655 b109738baedd99c8cd6ca88d73b6a319 968 SUPERFAMILY SSF52540 124 360 2.9E-37 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS14655 b109738baedd99c8cd6ca88d73b6a319 968 Pfam PF00176 SNF2 family N-terminal domain 174 441 7.7E-20 T 28-03-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 AM393_RS14655 b109738baedd99c8cd6ca88d73b6a319 968 SMART SM00487 150 342 1.3E-21 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AM393_RS14655 b109738baedd99c8cd6ca88d73b6a319 968 Gene3D G3DSA:3.40.50.300 484 951 3.6E-22 T 28-03-2018 AM393_RS14655 b109738baedd99c8cd6ca88d73b6a319 968 Pfam PF12137 RNA polymerase recycling family C-terminal 605 965 2.2E-156 T 28-03-2018 IPR022737 RNA polymerase recycling, bacterial, C-terminal GO:0016817 AM393_RS14655 b109738baedd99c8cd6ca88d73b6a319 968 Pfam PF00271 Helicase conserved C-terminal domain 495 601 3.0E-15 T 28-03-2018 IPR001650 Helicase, C-terminal AM393_RS14655 b109738baedd99c8cd6ca88d73b6a319 968 Hamap MF_01821 RNA polymerase-associated protein RapA [rapA]. 1 966 29.309 T 28-03-2018 IPR023949 RNA polymerase-associated protein RapA GO:0006355 AM393_RS25435 46036934898c76cd73fb9611f7ea88f0 201 Gene3D G3DSA:1.20.1050.10 98 200 8.5E-23 T 28-03-2018 AM393_RS25435 46036934898c76cd73fb9611f7ea88f0 201 SUPERFAMILY SSF47616 83 199 1.39E-28 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like AM393_RS25435 46036934898c76cd73fb9611f7ea88f0 201 Gene3D G3DSA:3.40.30.10 1 97 5.6E-21 T 28-03-2018 AM393_RS25435 46036934898c76cd73fb9611f7ea88f0 201 SUPERFAMILY SSF52833 1 79 1.51E-18 T 28-03-2018 IPR012336 Thioredoxin-like fold AM393_RS25435 46036934898c76cd73fb9611f7ea88f0 201 Pfam PF00043 Glutathione S-transferase, C-terminal domain 103 189 5.3E-13 T 28-03-2018 IPR004046 Glutathione S-transferase, C-terminal AM393_RS25435 46036934898c76cd73fb9611f7ea88f0 201 Pfam PF02798 Glutathione S-transferase, N-terminal domain 2 74 1.2E-10 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AM393_RS16960 0f8b7301fdd94b59ef735c6856a8c4ee 52 Pfam PF07026 Protein of unknown function (DUF1317) 1 51 3.1E-23 T 28-03-2018 IPR009750 Protein of unknown function DUF1317 AM393_RS11905 1db695d8322536ae6f64e86213e5c0ab 269 Gene3D G3DSA:3.40.50.10860 19 114 2.9E-29 T 28-03-2018 AM393_RS11905 1db695d8322536ae6f64e86213e5c0ab 269 SUPERFAMILY SSF51735 103 263 9.2E-36 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS11905 1db695d8322536ae6f64e86213e5c0ab 269 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 118 165 1.1E-6 T 28-03-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase AM393_RS11905 1db695d8322536ae6f64e86213e5c0ab 269 SUPERFAMILY SSF53223 3 102 9.78E-28 T 28-03-2018 AM393_RS11905 1db695d8322536ae6f64e86213e5c0ab 269 Gene3D G3DSA:3.40.50.720 115 268 2.2E-30 T 28-03-2018 AM393_RS11905 1db695d8322536ae6f64e86213e5c0ab 269 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 23 90 2.2E-17 T 28-03-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 AM393_RS04655 84423f5bcff2a159b769b01c631ea4f3 304 Pfam PF00480 ROK family 4 293 6.2E-69 T 28-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 AM393_RS04655 84423f5bcff2a159b769b01c631ea4f3 304 Gene3D G3DSA:3.30.420.40 1 116 6.6E-24 T 28-03-2018 AM393_RS04655 84423f5bcff2a159b769b01c631ea4f3 304 Gene3D G3DSA:3.30.420.40 117 297 1.6E-51 T 28-03-2018 AM393_RS04655 84423f5bcff2a159b769b01c631ea4f3 304 ProSitePatterns PS01125 ROK family signature. 131 158 - T 28-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 AM393_RS04655 84423f5bcff2a159b769b01c631ea4f3 304 SUPERFAMILY SSF53067 1 295 2.28E-61 T 28-03-2018 AM393_RS09695 b1244153e30ed7ec896507af8249f175 55 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 5 53 15.678 T 28-03-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS09695 b1244153e30ed7ec896507af8249f175 55 SUPERFAMILY SSF57829 1 53 3.05E-20 T 28-03-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 AM393_RS09695 b1244153e30ed7ec896507af8249f175 55 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 55 9.3E-28 T 28-03-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS09695 b1244153e30ed7ec896507af8249f175 55 Pfam PF00471 Ribosomal protein L33 7 53 1.2E-18 T 28-03-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS09695 b1244153e30ed7ec896507af8249f175 55 ProSitePatterns PS00582 Ribosomal protein L33 signature. 21 40 - T 28-03-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM393_RS18740 54de939fd32ea6efe0a3773a9b220b40 430 Gene3D G3DSA:2.130.10.10 199 256 5.1E-8 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 AM393_RS18740 54de939fd32ea6efe0a3773a9b220b40 430 Pfam PF07676 WD40-like Beta Propeller Repeat 369 396 0.0032 T 28-03-2018 IPR011659 WD40-like Beta Propeller AM393_RS18740 54de939fd32ea6efe0a3773a9b220b40 430 Pfam PF07676 WD40-like Beta Propeller Repeat 281 315 2.5E-11 T 28-03-2018 IPR011659 WD40-like Beta Propeller AM393_RS18740 54de939fd32ea6efe0a3773a9b220b40 430 Pfam PF07676 WD40-like Beta Propeller Repeat 237 272 1.2E-9 T 28-03-2018 IPR011659 WD40-like Beta Propeller AM393_RS18740 54de939fd32ea6efe0a3773a9b220b40 430 Pfam PF07676 WD40-like Beta Propeller Repeat 203 223 6.2E-5 T 28-03-2018 IPR011659 WD40-like Beta Propeller AM393_RS18740 54de939fd32ea6efe0a3773a9b220b40 430 Gene3D G3DSA:3.40.50.10070 22 164 4.2E-39 T 28-03-2018 AM393_RS18740 54de939fd32ea6efe0a3773a9b220b40 430 SUPERFAMILY SSF52964 28 161 1.44E-40 T 28-03-2018 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 AM393_RS18740 54de939fd32ea6efe0a3773a9b220b40 430 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 15 427 9.6E-159 T 28-03-2018 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 AM393_RS18740 54de939fd32ea6efe0a3773a9b220b40 430 SUPERFAMILY SSF69304 155 428 3.53E-55 T 28-03-2018 AM393_RS18740 54de939fd32ea6efe0a3773a9b220b40 430 Hamap MF_00671 Protein TolB [tolB]. 5 426 34.654 T 28-03-2018 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 AM393_RS18740 54de939fd32ea6efe0a3773a9b220b40 430 Pfam PF04052 TolB amino-terminal domain 23 121 7.6E-34 T 28-03-2018 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 AM393_RS18740 54de939fd32ea6efe0a3773a9b220b40 430 Gene3D G3DSA:2.130.10.150 257 429 6.0E-35 T 28-03-2018 AM393_RS27035 4b77b96578950a90f5ae0020b8caee9f 101 TIGRFAM TIGR02762 TraL_TIGR: type IV conjugative transfer system protein TraL 7 100 1.2E-21 T 28-03-2018 IPR009838 Type IV conjugative transfer system, protein TraL GO:0000746|GO:0019867 AM393_RS27035 4b77b96578950a90f5ae0020b8caee9f 101 Pfam PF07178 TraL protein 9 100 7.0E-33 T 28-03-2018 IPR009838 Type IV conjugative transfer system, protein TraL GO:0000746|GO:0019867 AM393_RS27035 4b77b96578950a90f5ae0020b8caee9f 101 PIRSF PIRSF003259 1 101 3.8E-50 T 28-03-2018 IPR016382 Pilus assembly, TraL GO:0009279|GO:0009297 AM393_RS04715 fd8ef86d999147355d4b09fc842b4ba2 343 Gene3D G3DSA:3.40.1570.10 1 167 2.4E-46 T 28-03-2018 AM393_RS04715 fd8ef86d999147355d4b09fc842b4ba2 343 Pfam PF05171 Haemin-degrading HemS.ChuX domain 32 156 3.4E-37 T 28-03-2018 IPR007845 Haemin-degrading HemS/ChuX domain GO:0006826 AM393_RS04715 fd8ef86d999147355d4b09fc842b4ba2 343 Pfam PF05171 Haemin-degrading HemS.ChuX domain 205 336 1.1E-40 T 28-03-2018 IPR007845 Haemin-degrading HemS/ChuX domain GO:0006826 AM393_RS04715 fd8ef86d999147355d4b09fc842b4ba2 343 SUPERFAMILY SSF144064 7 337 2.35E-125 T 28-03-2018 AM393_RS04715 fd8ef86d999147355d4b09fc842b4ba2 343 Gene3D G3DSA:3.40.1570.10 182 343 2.9E-52 T 28-03-2018 AM393_RS04415 e103061a3f73753b748c50fff2d623a6 165 Gene3D G3DSA:3.90.950.20 1 165 1.7E-60 T 28-03-2018 AM393_RS04415 e103061a3f73753b748c50fff2d623a6 165 Pfam PF02464 Competence-damaged protein 8 160 3.6E-59 T 28-03-2018 IPR008136 CinA, C-terminal AM393_RS04415 e103061a3f73753b748c50fff2d623a6 165 SUPERFAMILY SSF142433 3 161 2.48E-57 T 28-03-2018 IPR008136 CinA, C-terminal AM393_RS04415 e103061a3f73753b748c50fff2d623a6 165 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 13 158 7.4E-59 T 28-03-2018 IPR008136 CinA, C-terminal AM393_RS15540 0888251a1cd10caf5a5ee64cc98c327d 455 Gene3D G3DSA:1.10.530.10 22 249 1.3E-32 T 28-03-2018 AM393_RS15540 0888251a1cd10caf5a5ee64cc98c327d 455 Gene3D G3DSA:3.10.350.10 402 448 1.7E-15 T 28-03-2018 AM393_RS15540 0888251a1cd10caf5a5ee64cc98c327d 455 SUPERFAMILY SSF54106 403 446 1.57E-10 T 28-03-2018 IPR018392 LysM domain AM393_RS15540 0888251a1cd10caf5a5ee64cc98c327d 455 SMART SM00257 345 388 7.1E-14 T 28-03-2018 IPR018392 LysM domain AM393_RS15540 0888251a1cd10caf5a5ee64cc98c327d 455 SMART SM00257 404 446 1.1E-12 T 28-03-2018 IPR018392 LysM domain AM393_RS15540 0888251a1cd10caf5a5ee64cc98c327d 455 SUPERFAMILY SSF53955 102 252 4.26E-41 T 28-03-2018 IPR023346 Lysozyme-like domain AM393_RS15540 0888251a1cd10caf5a5ee64cc98c327d 455 Gene3D G3DSA:3.10.350.10 341 401 3.7E-13 T 28-03-2018 AM393_RS15540 0888251a1cd10caf5a5ee64cc98c327d 455 SUPERFAMILY SSF54106 344 387 3.01E-10 T 28-03-2018 IPR018392 LysM domain AM393_RS15540 0888251a1cd10caf5a5ee64cc98c327d 455 Pfam PF01476 LysM domain 405 445 7.6E-11 T 28-03-2018 IPR018392 LysM domain AM393_RS15540 0888251a1cd10caf5a5ee64cc98c327d 455 Pfam PF01476 LysM domain 346 387 1.9E-13 T 28-03-2018 IPR018392 LysM domain AM393_RS15540 0888251a1cd10caf5a5ee64cc98c327d 455 Pfam PF01464 Transglycosylase SLT domain 105 217 1.4E-28 T 28-03-2018 IPR008258 Transglycosylase SLT domain 1 AM393_RS15540 0888251a1cd10caf5a5ee64cc98c327d 455 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 124 152 - T 28-03-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 AM393_RS20110 faa46622dbd28f148b51fb38aad7e2f9 388 Pfam PF01546 Peptidase family M20/M25/M40 68 382 1.4E-29 T 28-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 AM393_RS20110 faa46622dbd28f148b51fb38aad7e2f9 388 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 10 373 8.1E-102 T 28-03-2018 IPR017439 Amidohydrolase GO:0016787 AM393_RS20110 faa46622dbd28f148b51fb38aad7e2f9 388 SUPERFAMILY SSF55031 178 295 7.72E-28 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain AM393_RS20110 faa46622dbd28f148b51fb38aad7e2f9 388 PIRSF PIRSF005962 1 388 2.3E-122 T 28-03-2018 IPR017439 Amidohydrolase GO:0016787 AM393_RS20110 faa46622dbd28f148b51fb38aad7e2f9 388 SUPERFAMILY SSF53187 4 193 9.57E-80 T 28-03-2018 AM393_RS20110 faa46622dbd28f148b51fb38aad7e2f9 388 SUPERFAMILY SSF53187 294 385 9.57E-80 T 28-03-2018 AM393_RS20110 faa46622dbd28f148b51fb38aad7e2f9 388 Pfam PF07687 Peptidase dimerisation domain 182 261 3.0E-5 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain AM393_RS20110 faa46622dbd28f148b51fb38aad7e2f9 388 Gene3D G3DSA:3.40.630.10 2 388 1.4E-63 T 28-03-2018 AM393_RS11275 3d75708645598a813115692f2c9dd480 109 Pfam PF00085 Thioredoxin 5 106 2.2E-34 T 28-03-2018 IPR013766 Thioredoxin domain GO:0045454 AM393_RS11275 3d75708645598a813115692f2c9dd480 109 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 107 6.0E-39 T 28-03-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 AM393_RS11275 3d75708645598a813115692f2c9dd480 109 PRINTS PR00421 Thioredoxin family signature 24 32 8.5E-10 T 28-03-2018 AM393_RS11275 3d75708645598a813115692f2c9dd480 109 PRINTS PR00421 Thioredoxin family signature 72 83 8.5E-10 T 28-03-2018 AM393_RS11275 3d75708645598a813115692f2c9dd480 109 PRINTS PR00421 Thioredoxin family signature 32 41 8.5E-10 T 28-03-2018 AM393_RS11275 3d75708645598a813115692f2c9dd480 109 ProSitePatterns PS00194 Thioredoxin family active site. 25 43 - T 28-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AM393_RS11275 3d75708645598a813115692f2c9dd480 109 Gene3D G3DSA:3.40.30.10 1 109 2.3E-36 T 28-03-2018 AM393_RS11275 3d75708645598a813115692f2c9dd480 109 SUPERFAMILY SSF52833 2 108 2.76E-42 T 28-03-2018 IPR012336 Thioredoxin-like fold AM393_RS11275 3d75708645598a813115692f2c9dd480 109 PIRSF PIRSF000077 2 108 1.4E-44 T 28-03-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 AM393_RS07675 4433585933056341ad64144ba42ce11b 241 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 215 236 1.0E-7 T 28-03-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal AM393_RS07675 4433585933056341ad64144ba42ce11b 241 Gene3D G3DSA:3.40.50.300 1 237 2.2E-64 T 28-03-2018 AM393_RS07675 4433585933056341ad64144ba42ce11b 241 Pfam PF00005 ABC transporter 20 166 9.7E-34 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS07675 4433585933056341ad64144ba42ce11b 241 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 3 241 8.8E-121 T 28-03-2018 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 AM393_RS07675 4433585933056341ad64144ba42ce11b 241 SUPERFAMILY SSF52540 4 237 1.44E-66 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS07675 4433585933056341ad64144ba42ce11b 241 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS07675 4433585933056341ad64144ba42ce11b 241 SMART SM00382 28 231 3.6E-10 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS15260 de78ffe338c68be59bf2515c60d3f45d 114 Gene3D G3DSA:2.60.300.12 8 114 5.0E-39 T 28-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 AM393_RS15260 de78ffe338c68be59bf2515c60d3f45d 114 Pfam PF01521 Iron-sulphur cluster biosynthesis 9 109 1.4E-20 T 28-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 AM393_RS15260 de78ffe338c68be59bf2515c60d3f45d 114 SUPERFAMILY SSF89360 8 103 4.12E-31 T 28-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 AM393_RS15260 de78ffe338c68be59bf2515c60d3f45d 114 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 10 114 5.9E-39 T 28-03-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 AM393_RS15260 de78ffe338c68be59bf2515c60d3f45d 114 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 95 112 - T 28-03-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 AM393_RS15260 de78ffe338c68be59bf2515c60d3f45d 114 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 1 114 36.935 T 28-03-2018 IPR023063 FeS cluster insertion protein ErpA GO:0097428 AM393_RS21760 49d92ee4afa173695be9182040e37cae 249 Pfam PF00455 DeoR C terminal sensor domain 71 225 3.4E-41 T 28-03-2018 IPR014036 DeoR C-terminal sensor domain AM393_RS21760 49d92ee4afa173695be9182040e37cae 249 SMART SM00420 4 56 3.6E-17 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM393_RS21760 49d92ee4afa173695be9182040e37cae 249 Pfam PF08220 DeoR-like helix-turn-helix domain 4 59 4.2E-14 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM393_RS21760 49d92ee4afa173695be9182040e37cae 249 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 22 36 2.3E-5 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM393_RS21760 49d92ee4afa173695be9182040e37cae 249 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 36 54 2.3E-5 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM393_RS21760 49d92ee4afa173695be9182040e37cae 249 Gene3D G3DSA:3.40.50.1360 59 217 2.4E-30 T 28-03-2018 AM393_RS21760 49d92ee4afa173695be9182040e37cae 249 SUPERFAMILY SSF46785 2 59 1.75E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS21760 49d92ee4afa173695be9182040e37cae 249 ProSitePatterns PS00894 DeoR-type HTH domain signature. 4 38 - T 28-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 AM393_RS21760 49d92ee4afa173695be9182040e37cae 249 SMART SM01134 67 227 1.3E-54 T 28-03-2018 AM393_RS21760 49d92ee4afa173695be9182040e37cae 249 SUPERFAMILY SSF100950 67 227 2.26E-25 T 28-03-2018 AM393_RS21760 49d92ee4afa173695be9182040e37cae 249 Gene3D G3DSA:1.10.10.10 1 55 4.7E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS21910 6b562966075fe4705f970f08cef6ef9d 235 Pfam PF00246 Zinc carboxypeptidase 72 157 1.0E-10 T 28-03-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 AM393_RS21910 6b562966075fe4705f970f08cef6ef9d 235 SUPERFAMILY SSF53187 134 215 6.28E-31 T 28-03-2018 AM393_RS21910 6b562966075fe4705f970f08cef6ef9d 235 SUPERFAMILY SSF53187 22 107 6.28E-31 T 28-03-2018 AM393_RS21910 6b562966075fe4705f970f08cef6ef9d 235 Gene3D G3DSA:3.40.630.10 34 234 7.8E-27 T 28-03-2018 AM393_RS05645 493ba03688177f1255bf8688f1c9e569 298 SUPERFAMILY SSF103481 182 283 3.53E-13 T 28-03-2018 AM393_RS05645 493ba03688177f1255bf8688f1c9e569 298 Pfam PF00892 EamA-like transporter family 149 281 1.4E-18 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM393_RS05645 493ba03688177f1255bf8688f1c9e569 298 Pfam PF00892 EamA-like transporter family 13 138 3.3E-15 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM393_RS05645 493ba03688177f1255bf8688f1c9e569 298 SUPERFAMILY SSF103481 45 141 5.49E-12 T 28-03-2018 AM393_RS19955 458b077a18bb743184d3705c7e5878d3 285 TIGRFAM TIGR04060 formate_focA: formate transporter FocA 14 279 3.9E-127 T 28-03-2018 IPR023999 Formate transporter FocA, putative GO:0015499|GO:0015724|GO:0016021 AM393_RS19955 458b077a18bb743184d3705c7e5878d3 285 Gene3D G3DSA:1.20.1080.10 12 285 4.2E-78 T 28-03-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 AM393_RS19955 458b077a18bb743184d3705c7e5878d3 285 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 83 92 - T 28-03-2018 IPR024002 Formate/nitrite transporter, conserved site AM393_RS19955 458b077a18bb743184d3705c7e5878d3 285 Pfam PF01226 Formate/nitrite transporter 15 276 8.9E-76 T 28-03-2018 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 AM393_RS19955 458b077a18bb743184d3705c7e5878d3 285 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 26 280 4.8E-96 T 28-03-2018 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 AM393_RS19955 458b077a18bb743184d3705c7e5878d3 285 ProSitePatterns PS01006 Formate and nitrite transporters signature 2. 168 178 - T 28-03-2018 IPR024002 Formate/nitrite transporter, conserved site AM393_RS01665 6bce357c6b6d006e921166d4107c1330 196 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 2 196 33.941 T 28-03-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 AM393_RS01665 6bce357c6b6d006e921166d4107c1330 196 PIRSF PIRSF000495 1 196 5.2E-65 T 28-03-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 AM393_RS01665 6bce357c6b6d006e921166d4107c1330 196 Pfam PF00117 Glutamine amidotransferase class-I 38 194 2.3E-18 T 28-03-2018 IPR017926 Glutamine amidotransferase AM393_RS01665 6bce357c6b6d006e921166d4107c1330 196 PRINTS PR00096 Glutamine amidotransferase superfamily signature 174 187 6.2E-5 T 28-03-2018 AM393_RS01665 6bce357c6b6d006e921166d4107c1330 196 PRINTS PR00096 Glutamine amidotransferase superfamily signature 72 83 6.2E-5 T 28-03-2018 AM393_RS01665 6bce357c6b6d006e921166d4107c1330 196 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 3 196 1.8E-74 T 28-03-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 AM393_RS01665 6bce357c6b6d006e921166d4107c1330 196 SUPERFAMILY SSF52317 3 195 3.06E-54 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AM393_RS01665 6bce357c6b6d006e921166d4107c1330 196 Gene3D G3DSA:3.40.50.880 1 196 2.3E-43 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AM393_RS12930 ce9958c4c6bda67c8c8254ef397ccd46 104 Hamap MF_00720 Primosomal replication protein N [priB]. 2 100 23.531 T 28-03-2018 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 AM393_RS12930 ce9958c4c6bda67c8c8254ef397ccd46 104 PIRSF PIRSF003135 1 101 1.9E-49 T 28-03-2018 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 AM393_RS12930 ce9958c4c6bda67c8c8254ef397ccd46 104 TIGRFAM TIGR04418 PriB_gamma: primosomal replication protein PriB 3 99 1.0E-35 T 28-03-2018 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 AM393_RS12930 ce9958c4c6bda67c8c8254ef397ccd46 104 SUPERFAMILY SSF50249 1 103 1.65E-28 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM393_RS12930 ce9958c4c6bda67c8c8254ef397ccd46 104 Pfam PF00436 Single-strand binding protein family 3 87 7.7E-11 T 28-03-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 AM393_RS12930 ce9958c4c6bda67c8c8254ef397ccd46 104 Gene3D G3DSA:2.40.50.140 2 104 6.4E-11 T 28-03-2018 AM393_RS26585 c99141facb366f09f67b3945327e134e 486 Gene3D G3DSA:3.30.870.10 100 288 4.0E-26 T 28-03-2018 AM393_RS26585 c99141facb366f09f67b3945327e134e 486 Pfam PF13091 PLD-like domain 134 242 8.1E-12 T 28-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 AM393_RS26585 c99141facb366f09f67b3945327e134e 486 Pfam PF13091 PLD-like domain 332 445 9.3E-23 T 28-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 AM393_RS26585 c99141facb366f09f67b3945327e134e 486 SMART SM00155 399 426 8.2E-6 T 28-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AM393_RS26585 c99141facb366f09f67b3945327e134e 486 SMART SM00155 219 246 1.4E-4 T 28-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AM393_RS26585 c99141facb366f09f67b3945327e134e 486 Pfam PF13396 Phospholipase_D-nuclease N-terminal 23 59 1.2E-6 T 28-03-2018 IPR027379 Cardiolipin synthase N-terminal AM393_RS26585 c99141facb366f09f67b3945327e134e 486 Hamap MF_00190 Cardiolipin synthase A [clsA]. 2 486 51.59 T 28-03-2018 IPR030840 Cardiolipin synthase A GO:0008808|GO:0016780|GO:0032049 AM393_RS26585 c99141facb366f09f67b3945327e134e 486 SUPERFAMILY SSF56024 274 473 2.2E-47 T 28-03-2018 AM393_RS26585 c99141facb366f09f67b3945327e134e 486 Gene3D G3DSA:3.30.870.10 316 477 1.6E-27 T 28-03-2018 AM393_RS26585 c99141facb366f09f67b3945327e134e 486 SUPERFAMILY SSF56024 66 315 1.19E-45 T 28-03-2018 AM393_RS26585 c99141facb366f09f67b3945327e134e 486 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 6 486 2.6E-219 T 28-03-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 AM393_RS15980 d87af8eb3723f148879caaa617d90a40 260 SUPERFAMILY SSF52540 6 256 6.41E-62 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS15980 d87af8eb3723f148879caaa617d90a40 260 Gene3D G3DSA:3.40.50.300 1 259 4.5E-56 T 28-03-2018 AM393_RS15980 d87af8eb3723f148879caaa617d90a40 260 SMART SM00382 32 232 1.9E-8 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS15980 d87af8eb3723f148879caaa617d90a40 260 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS15980 d87af8eb3723f148879caaa617d90a40 260 Pfam PF00005 ABC transporter 24 183 5.2E-34 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS20090 feb6772402860266a093fb4c138b2d7d 153 Pfam PF01037 Lrp/AsnC ligand binding domain 69 142 2.9E-15 T 28-03-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AM393_RS20090 feb6772402860266a093fb4c138b2d7d 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 8.5E-13 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AM393_RS20090 feb6772402860266a093fb4c138b2d7d 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 8.5E-13 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AM393_RS20090 feb6772402860266a093fb4c138b2d7d 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 8.5E-13 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AM393_RS20090 feb6772402860266a093fb4c138b2d7d 153 SMART SM00344 3 112 1.6E-38 T 28-03-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AM393_RS20090 feb6772402860266a093fb4c138b2d7d 153 SUPERFAMILY SSF54909 64 146 8.98E-15 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel AM393_RS20090 feb6772402860266a093fb4c138b2d7d 153 Gene3D G3DSA:1.10.10.10 1 52 9.5E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS20090 feb6772402860266a093fb4c138b2d7d 153 Gene3D G3DSA:3.30.70.920 55 149 8.0E-20 T 28-03-2018 AM393_RS20090 feb6772402860266a093fb4c138b2d7d 153 SUPERFAMILY SSF46785 2 78 5.66E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS20090 feb6772402860266a093fb4c138b2d7d 153 SMART SM00419 12 69 0.0067 T 28-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AM393_RS20090 feb6772402860266a093fb4c138b2d7d 153 Pfam PF13412 Winged helix-turn-helix DNA-binding 7 50 7.2E-18 T 28-03-2018 AM393_RS09520 3da87eb82a8e97a5767bddfb21a7e11e 635 SUPERFAMILY SSF55804 495 635 4.84E-41 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 AM393_RS09520 3da87eb82a8e97a5767bddfb21a7e11e 635 TIGRFAM TIGR00851 mtlA: PTS system, mannitol-specific IIC component 8 347 3.6E-189 T 28-03-2018 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC GO:0008982|GO:0009401|GO:0016021 KEGG: 00051+2.7.1.197|KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 AM393_RS09520 3da87eb82a8e97a5767bddfb21a7e11e 635 Gene3D G3DSA:3.40.50.2300 365 471 1.1E-20 T 28-03-2018 AM393_RS09520 3da87eb82a8e97a5767bddfb21a7e11e 635 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 539 555 - T 28-03-2018 IPR002178 PTS EIIA type-2 domain AM393_RS09520 3da87eb82a8e97a5767bddfb21a7e11e 635 SUPERFAMILY SSF52794 377 466 3.87E-22 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AM393_RS09520 3da87eb82a8e97a5767bddfb21a7e11e 635 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 379 453 2.0E-9 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AM393_RS09520 3da87eb82a8e97a5767bddfb21a7e11e 635 Pfam PF02378 Phosphotransferase system, EIIC 17 277 2.2E-21 T 28-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AM393_RS09520 3da87eb82a8e97a5767bddfb21a7e11e 635 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 498 635 3.8E-33 T 28-03-2018 IPR002178 PTS EIIA type-2 domain AM393_RS09520 3da87eb82a8e97a5767bddfb21a7e11e 635 Gene3D G3DSA:3.40.930.10 491 635 7.7E-36 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 AM393_RS01955 7ea584069de791fae9413989fb28be89 535 PIRSF PIRSF000538 5 533 1.4E-75 T 28-03-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AM393_RS01955 7ea584069de791fae9413989fb28be89 535 SUPERFAMILY SSF53067 277 529 1.41E-48 T 28-03-2018 AM393_RS01955 7ea584069de791fae9413989fb28be89 535 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 278 485 6.3E-48 T 28-03-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 AM393_RS01955 7ea584069de791fae9413989fb28be89 535 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 8 265 1.1E-30 T 28-03-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 AM393_RS01955 7ea584069de791fae9413989fb28be89 535 Gene3D G3DSA:3.30.420.40 272 533 1.0E-54 T 28-03-2018 AM393_RS01955 7ea584069de791fae9413989fb28be89 535 TIGRFAM TIGR01315 5C_CHO_kinase: FGGY-family pentulose kinase 8 534 1.3E-229 T 28-03-2018 IPR006003 FGGY carbohydrate kinase, pentulose kinase GO:0005975|GO:0016773 AM393_RS01955 7ea584069de791fae9413989fb28be89 535 SUPERFAMILY SSF53067 8 266 3.28E-63 T 28-03-2018 AM393_RS01955 7ea584069de791fae9413989fb28be89 535 Gene3D G3DSA:3.30.420.40 3 266 1.4E-70 T 28-03-2018 AM393_RS23525 8379b781f8a36868053cb9cecccdaec9 388 Pfam PF13088 BNR repeat-like domain 43 364 8.9E-70 T 28-03-2018 IPR011040 Sialidases KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18|Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 AM393_RS23525 8379b781f8a36868053cb9cecccdaec9 388 Gene3D G3DSA:2.120.10.10 23 388 1.0E-61 T 28-03-2018 AM393_RS23525 8379b781f8a36868053cb9cecccdaec9 388 SUPERFAMILY SSF50939 30 269 1.99E-58 T 28-03-2018 IPR011040 Sialidases KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18|Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 AM393_RS23525 8379b781f8a36868053cb9cecccdaec9 388 SUPERFAMILY SSF50939 302 384 1.99E-58 T 28-03-2018 IPR011040 Sialidases KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18|Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 AM393_RS16095 05e2ff6a34e7c4f15aacb7284a695a71 399 PRINTS PR01035 Tetracycline resistance protein signature 17 33 1.2E-11 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AM393_RS16095 05e2ff6a34e7c4f15aacb7284a695a71 399 PRINTS PR01035 Tetracycline resistance protein signature 79 103 1.2E-11 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AM393_RS16095 05e2ff6a34e7c4f15aacb7284a695a71 399 PRINTS PR01035 Tetracycline resistance protein signature 341 364 1.2E-11 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AM393_RS16095 05e2ff6a34e7c4f15aacb7284a695a71 399 PRINTS PR01035 Tetracycline resistance protein signature 136 158 1.2E-11 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AM393_RS16095 05e2ff6a34e7c4f15aacb7284a695a71 399 PRINTS PR01035 Tetracycline resistance protein signature 106 127 1.2E-11 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AM393_RS16095 05e2ff6a34e7c4f15aacb7284a695a71 399 Pfam PF07690 Major Facilitator Superfamily 11 236 1.0E-28 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS16095 05e2ff6a34e7c4f15aacb7284a695a71 399 SUPERFAMILY SSF103473 6 395 5.23E-66 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS16095 05e2ff6a34e7c4f15aacb7284a695a71 399 Gene3D G3DSA:1.20.1250.20 3 200 2.4E-35 T 28-03-2018 AM393_RS16095 05e2ff6a34e7c4f15aacb7284a695a71 399 Gene3D G3DSA:1.20.1250.20 201 399 4.2E-25 T 28-03-2018 AM393_RS25250 d5d444fb5a157fa985b2108d26102104 289 SUPERFAMILY SSF46689 188 235 2.69E-12 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS25250 d5d444fb5a157fa985b2108d26102104 289 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 238 280 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM393_RS25250 d5d444fb5a157fa985b2108d26102104 289 SUPERFAMILY SSF46689 238 286 2.11E-11 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS25250 d5d444fb5a157fa985b2108d26102104 289 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 268 284 4.0E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM393_RS25250 d5d444fb5a157fa985b2108d26102104 289 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 253 268 4.0E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM393_RS25250 d5d444fb5a157fa985b2108d26102104 289 Gene3D G3DSA:1.10.10.60 240 289 1.0E-16 T 28-03-2018 AM393_RS25250 d5d444fb5a157fa985b2108d26102104 289 Pfam PF12833 Helix-turn-helix domain 207 285 9.6E-23 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM393_RS25250 d5d444fb5a157fa985b2108d26102104 289 Gene3D G3DSA:1.10.10.60 97 239 9.2E-17 T 28-03-2018 AM393_RS25250 d5d444fb5a157fa985b2108d26102104 289 SMART SM00342 201 284 3.2E-35 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM393_RS13755 8cd5ddd932863c9ab1267e95942ab42b 260 SUPERFAMILY SSF52218 1 243 2.1E-71 T 28-03-2018 IPR029039 Flavoprotein-like domain AM393_RS13755 8cd5ddd932863c9ab1267e95942ab42b 260 Gene3D G3DSA:3.40.50.360 1 258 9.2E-73 T 28-03-2018 IPR029039 Flavoprotein-like domain AM393_RS13755 8cd5ddd932863c9ab1267e95942ab42b 260 Pfam PF02525 Flavodoxin-like fold 1 215 3.4E-56 T 28-03-2018 IPR003680 Flavodoxin-like fold AM393_RS15265 3e8de6ba99db99f61512c73dc72adf23 207 Pfam PF03458 UPF0126 domain 92 163 7.3E-19 T 28-03-2018 IPR005115 Uncharacterised domain UPF0126 AM393_RS15265 3e8de6ba99db99f61512c73dc72adf23 207 Pfam PF03458 UPF0126 domain 4 78 4.2E-23 T 28-03-2018 IPR005115 Uncharacterised domain UPF0126 AM393_RS11300 337c05f949f221ed9b4c79dce9001499 376 SUPERFAMILY SSF53756 2 371 1.2E-140 T 28-03-2018 AM393_RS11300 337c05f949f221ed9b4c79dce9001499 376 Gene3D G3DSA:3.40.50.2000 1 204 2.4E-79 T 28-03-2018 AM393_RS11300 337c05f949f221ed9b4c79dce9001499 376 Hamap MF_02028 UDP-N-acetylglucosamine 2-epimerase [wecB]. 16 374 66.649 T 28-03-2018 IPR032892 UDP-N-acetylglucosamine 2-epimerase WecB GO:0008761|GO:0009246 KEGG: 00520+5.1.3.14|MetaCyc: PWY-7335|MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7819 AM393_RS11300 337c05f949f221ed9b4c79dce9001499 376 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 1 372 7.1E-173 T 28-03-2018 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 AM393_RS11300 337c05f949f221ed9b4c79dce9001499 376 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 22 370 3.6E-127 T 28-03-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001 AM393_RS11300 337c05f949f221ed9b4c79dce9001499 376 Gene3D G3DSA:3.40.50.2000 205 350 2.8E-44 T 28-03-2018 AM393_RS27770 82c48d0c2bb4b2168aa53749d2132b03 183 SUPERFAMILY SSF56024 35 179 1.88E-35 T 28-03-2018 AM393_RS27770 82c48d0c2bb4b2168aa53749d2132b03 183 Pfam PF13091 PLD-like domain 45 164 4.4E-25 T 28-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 AM393_RS27770 82c48d0c2bb4b2168aa53749d2132b03 183 Gene3D G3DSA:3.30.870.10 26 183 3.4E-26 T 28-03-2018 AM393_RS05445 97ca783eb25ba1c4416277085cf27a55 397 Hamap MF_01585 Lysophospholipid transporter LplT [lplT]. 1 397 38.64 T 28-03-2018 IPR023727 Lysophospholipid transporter LplT GO:0005886|GO:0051977|GO:0051978 AM393_RS05445 97ca783eb25ba1c4416277085cf27a55 397 SUPERFAMILY SSF103473 16 396 7.98E-27 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS05445 97ca783eb25ba1c4416277085cf27a55 397 Gene3D G3DSA:1.20.1250.20 11 197 2.0E-15 T 28-03-2018 AM393_RS05445 97ca783eb25ba1c4416277085cf27a55 397 Gene3D G3DSA:1.20.1250.20 202 397 2.7E-6 T 28-03-2018 AM393_RS05445 97ca783eb25ba1c4416277085cf27a55 397 Pfam PF07690 Major Facilitator Superfamily 19 356 1.6E-16 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS18220 fa96fafe6e7351922bbeed41e25e10f2 249 Gene3D G3DSA:3.40.30.10 104 247 1.0E-19 T 28-03-2018 AM393_RS18220 fa96fafe6e7351922bbeed41e25e10f2 249 SUPERFAMILY SSF54423 19 77 2.09E-22 T 28-03-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal AM393_RS18220 fa96fafe6e7351922bbeed41e25e10f2 249 Gene3D G3DSA:3.10.450.70 24 86 3.5E-27 T 28-03-2018 AM393_RS18220 fa96fafe6e7351922bbeed41e25e10f2 249 Pfam PF13098 Thioredoxin-like domain 115 242 3.9E-16 T 28-03-2018 IPR012336 Thioredoxin-like fold AM393_RS18220 fa96fafe6e7351922bbeed41e25e10f2 249 SUPERFAMILY SSF52833 84 242 4.86E-36 T 28-03-2018 IPR012336 Thioredoxin-like fold AM393_RS13565 bfef21b950355cc55b973afe6722c99e 484 Gene3D G3DSA:1.20.1250.20 252 473 4.9E-11 T 28-03-2018 AM393_RS13565 bfef21b950355cc55b973afe6722c99e 484 Pfam PF13347 MFS/sugar transport protein 23 469 9.8E-84 T 28-03-2018 AM393_RS13565 bfef21b950355cc55b973afe6722c99e 484 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 21 480 6.7E-89 T 28-03-2018 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 AM393_RS13565 bfef21b950355cc55b973afe6722c99e 484 Gene3D G3DSA:1.20.1250.20 22 251 3.0E-13 T 28-03-2018 AM393_RS13565 bfef21b950355cc55b973afe6722c99e 484 SUPERFAMILY SSF103473 22 179 8.11E-28 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS13565 bfef21b950355cc55b973afe6722c99e 484 SUPERFAMILY SSF103473 213 469 8.11E-28 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS10760 4566902677d16ef0cd7b216ff0c4b25f 127 SUPERFAMILY SSF88723 5 119 1.85E-28 T 28-03-2018 IPR029060 PIN domain-like AM393_RS10760 4566902677d16ef0cd7b216ff0c4b25f 127 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 6 119 10.076 T 28-03-2018 IPR022907 VapC family GO:0004540 AM393_RS10760 4566902677d16ef0cd7b216ff0c4b25f 127 Pfam PF01850 PIN domain 7 112 4.3E-19 T 28-03-2018 IPR002716 PIN domain AM393_RS10760 4566902677d16ef0cd7b216ff0c4b25f 127 Gene3D G3DSA:3.40.50.1010 2 121 6.0E-24 T 28-03-2018 IPR029060 PIN domain-like AM393_RS13550 e231e5f090fd3e4a90cdc46333802bd1 289 PIRSF PIRSF030850 1 289 9.6E-129 T 28-03-2018 IPR011396 Uncharacterised conserved protein UCP030850 AM393_RS13550 e231e5f090fd3e4a90cdc46333802bd1 289 Pfam PF13391 HNH endonuclease 181 234 3.7E-7 T 28-03-2018 IPR003615 HNH nuclease AM393_RS13550 e231e5f090fd3e4a90cdc46333802bd1 289 Gene3D G3DSA:3.40.1800.10 159 238 3.4E-10 T 28-03-2018 AM393_RS26970 7a905f495fef33480ac816f8ae1d415d 129 Pfam PF09677 Type-F conjugative transfer system protein (TrbI_Ftype) 22 125 9.0E-41 T 28-03-2018 IPR014115 Type-F conjugative transfer system protein TrbI AM393_RS26970 7a905f495fef33480ac816f8ae1d415d 129 TIGRFAM TIGR02744 TrbI_Ftype: type-F conjugative transfer system protein TrbI 22 126 2.6E-40 T 28-03-2018 IPR014115 Type-F conjugative transfer system protein TrbI AM393_RS15010 4afb3f156637d30707688241fb4ce89c 120 ProDom PD020773 UPF0231 YACL UNCHARACTERISED UCP006287 VC0605 UNCHARACTERIZED 3'REGION VV2750 BCR OXIDASE 1 117 3.0E-57 T 28-03-2018 IPR008249 Uncharacterised protein family UPF0231 AM393_RS15010 4afb3f156637d30707688241fb4ce89c 120 PIRSF PIRSF006287 1 120 6.8E-49 T 28-03-2018 IPR008249 Uncharacterised protein family UPF0231 AM393_RS15010 4afb3f156637d30707688241fb4ce89c 120 Pfam PF06062 Uncharacterised protein family (UPF0231) 1 117 2.2E-42 T 28-03-2018 IPR008249 Uncharacterised protein family UPF0231 AM393_RS15010 4afb3f156637d30707688241fb4ce89c 120 Hamap MF_01053 UPF0231 protein YacL [yacL]. 1 119 29.587 T 28-03-2018 IPR008249 Uncharacterised protein family UPF0231 AM393_RS04490 dc927ed9d68bdcba415201ed84de7a86 482 SUPERFAMILY SSF52218 251 396 5.16E-33 T 28-03-2018 IPR029039 Flavoprotein-like domain AM393_RS04490 dc927ed9d68bdcba415201ed84de7a86 482 Pfam PF00753 Metallo-beta-lactamase superfamily 34 178 2.2E-10 T 28-03-2018 IPR001279 Metallo-beta-lactamase AM393_RS04490 dc927ed9d68bdcba415201ed84de7a86 482 Gene3D G3DSA:3.60.15.10 1 247 1.6E-42 T 28-03-2018 IPR001279 Metallo-beta-lactamase AM393_RS04490 dc927ed9d68bdcba415201ed84de7a86 482 PRINTS PR00163 Rubredoxin signature 428 444 1.3E-6 T 28-03-2018 IPR024935 Rubredoxin domain GO:0005506 AM393_RS04490 dc927ed9d68bdcba415201ed84de7a86 482 PRINTS PR00163 Rubredoxin signature 458 474 1.3E-6 T 28-03-2018 IPR024935 Rubredoxin domain GO:0005506 AM393_RS04490 dc927ed9d68bdcba415201ed84de7a86 482 SUPERFAMILY SSF57802 428 478 5.26E-18 T 28-03-2018 AM393_RS04490 dc927ed9d68bdcba415201ed84de7a86 482 Gene3D G3DSA:2.20.28.10 427 479 2.6E-19 T 28-03-2018 AM393_RS04490 dc927ed9d68bdcba415201ed84de7a86 482 SUPERFAMILY SSF56281 8 285 5.5E-51 T 28-03-2018 IPR001279 Metallo-beta-lactamase AM393_RS04490 dc927ed9d68bdcba415201ed84de7a86 482 Pfam PF00301 Rubredoxin 429 474 1.8E-20 T 28-03-2018 IPR024935 Rubredoxin domain GO:0005506 AM393_RS04490 dc927ed9d68bdcba415201ed84de7a86 482 PIRSF PIRSF005243 1 399 3.1E-160 T 28-03-2018 IPR016440 Rubredoxin-oxygen oxidoreductase GO:0009055|GO:0010181|GO:0016491|GO:0046872 AM393_RS04490 dc927ed9d68bdcba415201ed84de7a86 482 Hamap MF_01312 Anaerobic nitric oxide reductase flavorubredoxin [norV]. 1 478 91.632 T 28-03-2018 IPR023957 Anaerobic nitric oxide reductase flavorubredoxin GO:0005506|GO:0016966 AM393_RS04490 dc927ed9d68bdcba415201ed84de7a86 482 SMART SM00849 34 227 1.2E-29 T 28-03-2018 IPR001279 Metallo-beta-lactamase AM393_RS04490 dc927ed9d68bdcba415201ed84de7a86 482 Gene3D G3DSA:3.40.50.360 253 395 5.4E-20 T 28-03-2018 IPR029039 Flavoprotein-like domain AM393_RS04490 dc927ed9d68bdcba415201ed84de7a86 482 Pfam PF00258 Flavodoxin 256 388 2.8E-12 T 28-03-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 AM393_RS28210 6d3eb74027ed45405b6709c9c9c7309a 1015 SUPERFAMILY SSF52540 665 783 7.99E-13 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS28210 6d3eb74027ed45405b6709c9c9c7309a 1015 SUPERFAMILY SSF52540 815 907 7.99E-13 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS28210 6d3eb74027ed45405b6709c9c9c7309a 1015 SUPERFAMILY SSF52540 449 624 7.99E-13 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS28210 6d3eb74027ed45405b6709c9c9c7309a 1015 Gene3D G3DSA:3.40.50.300 479 943 9.5E-12 T 28-03-2018 AM393_RS02890 93e69e2d6ec88a6057677409ed9fd99c 182 Pfam PF04315 Elongation factor P hydroxylase 13 175 1.5E-80 T 28-03-2018 IPR007411 Elongation factor P hydroxylase AM393_RS01905 3d6a4e1815731935e371576e2507fa5c 240 Gene3D G3DSA:1.10.10.10 132 239 7.3E-27 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS01905 3d6a4e1815731935e371576e2507fa5c 240 Pfam PF00486 Transcriptional regulatory protein, C terminal 159 231 1.1E-23 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM393_RS01905 3d6a4e1815731935e371576e2507fa5c 240 SUPERFAMILY SSF46894 141 234 6.8E-26 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM393_RS01905 3d6a4e1815731935e371576e2507fa5c 240 SUPERFAMILY SSF52172 6 137 1.31E-38 T 28-03-2018 IPR011006 CheY-like superfamily AM393_RS01905 3d6a4e1815731935e371576e2507fa5c 240 Gene3D G3DSA:3.40.50.2300 3 131 1.3E-33 T 28-03-2018 AM393_RS01905 3d6a4e1815731935e371576e2507fa5c 240 SMART SM00862 156 232 1.5E-25 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM393_RS01905 3d6a4e1815731935e371576e2507fa5c 240 SMART SM00448 11 121 2.6E-38 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM393_RS01905 3d6a4e1815731935e371576e2507fa5c 240 Pfam PF00072 Response regulator receiver domain 13 121 1.8E-24 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM393_RS02980 65c1b4e345edeabeaf28652804ac4318 398 Gene3D G3DSA:1.20.1250.20 6 197 7.3E-19 T 28-03-2018 AM393_RS02980 65c1b4e345edeabeaf28652804ac4318 398 SUPERFAMILY SSF103473 6 387 4.71E-51 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS02980 65c1b4e345edeabeaf28652804ac4318 398 Pfam PF07690 Major Facilitator Superfamily 26 344 8.7E-27 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS02980 65c1b4e345edeabeaf28652804ac4318 398 Gene3D G3DSA:1.20.1250.20 198 385 2.0E-19 T 28-03-2018 AM393_RS03650 3825bb137337205356ed99e2bc98f6b7 212 Pfam PF06226 Protein of unknown function (DUF1007) 10 211 9.3E-60 T 28-03-2018 IPR010412 Protein of unknown function DUF1007 AM393_RS03650 3825bb137337205356ed99e2bc98f6b7 212 PIRSF PIRSF008159 1 212 1.1E-66 T 28-03-2018 IPR016537 Uncharacterised conserved protein UCP008159, AM393_RS26575 f2eb95c43febbd766b07d94a64ece4e0 192 Pfam PF04264 YceI-like domain 27 189 5.6E-37 T 28-03-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like AM393_RS26575 f2eb95c43febbd766b07d94a64ece4e0 192 SMART SM00867 26 190 1.2E-60 T 28-03-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like AM393_RS26575 f2eb95c43febbd766b07d94a64ece4e0 192 SUPERFAMILY SSF101874 24 190 2.22E-49 T 28-03-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like AM393_RS26575 f2eb95c43febbd766b07d94a64ece4e0 192 Gene3D G3DSA:2.40.128.110 25 191 2.7E-47 T 28-03-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like AM393_RS16675 949b72e6b10988997b11beba62936f29 483 SUPERFAMILY SSF53383 101 480 7.23E-83 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM393_RS16675 949b72e6b10988997b11beba62936f29 483 SUPERFAMILY SSF46785 23 90 7.72E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS16675 949b72e6b10988997b11beba62936f29 483 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 61 9.1E-6 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM393_RS16675 949b72e6b10988997b11beba62936f29 483 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 61 77 9.1E-6 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM393_RS16675 949b72e6b10988997b11beba62936f29 483 Pfam PF00155 Aminotransferase class I and II 147 429 7.8E-22 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AM393_RS16675 949b72e6b10988997b11beba62936f29 483 Gene3D G3DSA:3.40.640.10 136 382 2.1E-43 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM393_RS16675 949b72e6b10988997b11beba62936f29 483 SMART SM00345 28 86 3.0E-6 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM393_RS16675 949b72e6b10988997b11beba62936f29 483 Gene3D G3DSA:3.90.1150.10 383 481 1.3E-15 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM393_RS16675 949b72e6b10988997b11beba62936f29 483 Gene3D G3DSA:1.10.10.10 10 88 7.3E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS16675 949b72e6b10988997b11beba62936f29 483 Pfam PF00392 Bacterial regulatory proteins, gntR family 25 83 1.6E-10 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM393_RS11315 59122e870122f199c1471212ebcc4a59 293 SUPERFAMILY SSF53448 1 286 4.28E-90 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM393_RS11315 59122e870122f199c1471212ebcc4a59 293 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 2 286 2.9E-157 T 28-03-2018 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|KEGG: 00525+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 AM393_RS11315 59122e870122f199c1471212ebcc4a59 293 Pfam PF00483 Nucleotidyl transferase 2 238 1.5E-69 T 28-03-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 AM393_RS11315 59122e870122f199c1471212ebcc4a59 293 Gene3D G3DSA:3.90.550.10 1 292 6.3E-68 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM393_RS02170 fdf7ac0cdbcb725f25de235fc704f2e3 340 Pfam PF13377 Periplasmic binding protein-like domain 169 329 3.9E-32 T 28-03-2018 AM393_RS02170 fdf7ac0cdbcb725f25de235fc704f2e3 340 Gene3D G3DSA:1.10.260.40 2 57 9.3E-25 T 28-03-2018 AM393_RS02170 fdf7ac0cdbcb725f25de235fc704f2e3 340 SMART SM00354 1 71 5.1E-34 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM393_RS02170 fdf7ac0cdbcb725f25de235fc704f2e3 340 Gene3D G3DSA:3.40.50.2300 167 332 3.9E-44 T 28-03-2018 AM393_RS02170 fdf7ac0cdbcb725f25de235fc704f2e3 340 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 5.4E-7 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM393_RS02170 fdf7ac0cdbcb725f25de235fc704f2e3 340 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 5.4E-7 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM393_RS02170 fdf7ac0cdbcb725f25de235fc704f2e3 340 Gene3D G3DSA:3.40.50.2300 58 166 2.8E-22 T 28-03-2018 AM393_RS02170 fdf7ac0cdbcb725f25de235fc704f2e3 340 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 3.6E-20 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM393_RS02170 fdf7ac0cdbcb725f25de235fc704f2e3 340 SUPERFAMILY SSF47413 1 59 6.38E-19 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM393_RS02170 fdf7ac0cdbcb725f25de235fc704f2e3 340 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 28-03-2018 AM393_RS02170 fdf7ac0cdbcb725f25de235fc704f2e3 340 SUPERFAMILY SSF53822 61 331 2.57E-77 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AM393_RS23390 f743014a8ad41831db0e5284fb95a4ba 286 ProSitePatterns PS00146 Beta-lactamase class-A active site. 62 77 - T 28-03-2018 IPR023650 Beta-lactamase, class-A active site KEGG: 00311+3.5.2.6 AM393_RS23390 f743014a8ad41831db0e5284fb95a4ba 286 SUPERFAMILY SSF56601 26 283 1.2E-77 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AM393_RS23390 f743014a8ad41831db0e5284fb95a4ba 286 PRINTS PR00118 Beta-lactamase class A signature 28 52 3.8E-79 T 28-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 AM393_RS23390 f743014a8ad41831db0e5284fb95a4ba 286 PRINTS PR00118 Beta-lactamase class A signature 138 162 3.8E-79 T 28-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 AM393_RS23390 f743014a8ad41831db0e5284fb95a4ba 286 PRINTS PR00118 Beta-lactamase class A signature 200 215 3.8E-79 T 28-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 AM393_RS23390 f743014a8ad41831db0e5284fb95a4ba 286 PRINTS PR00118 Beta-lactamase class A signature 102 127 3.8E-79 T 28-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 AM393_RS23390 f743014a8ad41831db0e5284fb95a4ba 286 PRINTS PR00118 Beta-lactamase class A signature 217 232 3.8E-79 T 28-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 AM393_RS23390 f743014a8ad41831db0e5284fb95a4ba 286 PRINTS PR00118 Beta-lactamase class A signature 164 189 3.8E-79 T 28-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 AM393_RS23390 f743014a8ad41831db0e5284fb95a4ba 286 PRINTS PR00118 Beta-lactamase class A signature 60 77 3.8E-79 T 28-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 AM393_RS23390 f743014a8ad41831db0e5284fb95a4ba 286 Pfam PF13354 Beta-lactamase enzyme family 49 255 5.2E-37 T 28-03-2018 AM393_RS23390 f743014a8ad41831db0e5284fb95a4ba 286 Gene3D G3DSA:3.40.710.10 24 284 8.9E-35 T 28-03-2018 AM393_RS19740 a0d3eeef54d7d633cd71d2cfee452139 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 47 214 1.6E-14 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS19740 a0d3eeef54d7d633cd71d2cfee452139 222 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 5 110 9.5E-17 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AM393_RS19740 a0d3eeef54d7d633cd71d2cfee452139 222 SUPERFAMILY SSF161098 6 200 7.06E-28 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS19740 a0d3eeef54d7d633cd71d2cfee452139 222 Gene3D G3DSA:1.10.3720.10 1 221 1.9E-29 T 28-03-2018 AM393_RS11530 745e43189d58ca0d4147cd40bd4b317a 546 Hamap MF_00414 Probable protein kinase UbiB [ubiB]. 3 542 56.828 T 28-03-2018 IPR010232 Probable protein kinase UbiB GO:0006744 AM393_RS11530 745e43189d58ca0d4147cd40bd4b317a 546 Pfam PF03109 ABC1 family 116 232 1.0E-34 T 28-03-2018 IPR004147 UbiB domain AM393_RS11530 745e43189d58ca0d4147cd40bd4b317a 546 Gene3D G3DSA:3.30.200.20 103 245 1.6E-19 T 28-03-2018 AM393_RS11530 745e43189d58ca0d4147cd40bd4b317a 546 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 6 446 2.0E-185 T 28-03-2018 IPR010232 Probable protein kinase UbiB GO:0006744 AM393_RS11530 745e43189d58ca0d4147cd40bd4b317a 546 SUPERFAMILY SSF56112 94 159 5.49E-49 T 28-03-2018 IPR011009 Protein kinase-like domain AM393_RS11530 745e43189d58ca0d4147cd40bd4b317a 546 SUPERFAMILY SSF56112 194 438 5.49E-49 T 28-03-2018 IPR011009 Protein kinase-like domain AM393_RS23700 ad05ce9c16535024e499e8802af747d9 268 PIRSF PIRSF002854 1 265 1.1E-101 T 28-03-2018 IPR004872 Lipoprotein NlpA family AM393_RS23700 ad05ce9c16535024e499e8802af747d9 268 Gene3D G3DSA:3.40.190.10 119 265 6.9E-50 T 28-03-2018 AM393_RS23700 ad05ce9c16535024e499e8802af747d9 268 Pfam PF03180 NLPA lipoprotein 27 264 3.0E-76 T 28-03-2018 IPR004872 Lipoprotein NlpA family AM393_RS23700 ad05ce9c16535024e499e8802af747d9 268 Gene3D G3DSA:3.40.190.10 23 118 6.9E-17 T 28-03-2018 AM393_RS23700 ad05ce9c16535024e499e8802af747d9 268 SUPERFAMILY SSF53850 27 265 1.55E-66 T 28-03-2018 AM393_RS13245 60f532508f8501a880add442b15d5526 324 Gene3D G3DSA:3.40.50.10490 172 308 3.7E-13 T 28-03-2018 AM393_RS13245 60f532508f8501a880add442b15d5526 324 Gene3D G3DSA:3.40.50.10490 1 147 4.9E-23 T 28-03-2018 AM393_RS13245 60f532508f8501a880add442b15d5526 324 Pfam PF01380 SIS domain 22 126 2.8E-11 T 28-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AM393_RS13245 60f532508f8501a880add442b15d5526 324 PIRSF PIRSF009290 1 324 1.8E-115 T 28-03-2018 IPR024713 Fructosamine deglycase FrlB AM393_RS13245 60f532508f8501a880add442b15d5526 324 SUPERFAMILY SSF53697 5 322 1.32E-55 T 28-03-2018 AM393_RS24130 872283ce5ee237febed4c6b4a1bab655 251 Gene3D G3DSA:3.40.50.880 1 250 2.2E-47 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AM393_RS24130 872283ce5ee237febed4c6b4a1bab655 251 Pfam PF07090 Putative glutamine amidotransferase 4 248 1.1E-109 T 28-03-2018 IPR010768 Putative glutamine amidotransferase AM393_RS24130 872283ce5ee237febed4c6b4a1bab655 251 PIRSF PIRSF034405 1 251 3.8E-100 T 28-03-2018 IPR017027 Uncharacterised conserved protein UCP034405 AM393_RS24130 872283ce5ee237febed4c6b4a1bab655 251 SUPERFAMILY SSF52317 4 248 2.75E-64 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AM393_RS13315 2dfe24d9b14817ce0ce4b16ba21dbff9 360 Pfam PF03739 Predicted permease YjgP/YjgQ family 9 358 2.6E-73 T 28-03-2018 IPR005495 Permease LptG/LptF-related GO:0016021 AM393_RS13315 2dfe24d9b14817ce0ce4b16ba21dbff9 360 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 6 358 5.7E-137 T 28-03-2018 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 AM393_RS25575 16db6fc89008a3471ba411e239ba5b93 211 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 203 6.1E-88 T 28-03-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AM393_RS25575 16db6fc89008a3471ba411e239ba5b93 211 SUPERFAMILY SSF63380 1 93 1.11E-26 T 28-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AM393_RS25575 16db6fc89008a3471ba411e239ba5b93 211 PIRSF PIRSF000498 1 211 1.6E-75 T 28-03-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AM393_RS25575 16db6fc89008a3471ba411e239ba5b93 211 SUPERFAMILY SSF63380 94 200 7.74E-32 T 28-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AM393_RS25575 16db6fc89008a3471ba411e239ba5b93 211 Gene3D G3DSA:2.40.30.20 94 192 6.0E-27 T 28-03-2018 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM393_RS25575 16db6fc89008a3471ba411e239ba5b93 211 Gene3D G3DSA:2.40.30.20 1 93 3.5E-28 T 28-03-2018 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM393_RS25575 16db6fc89008a3471ba411e239ba5b93 211 Pfam PF00677 Lumazine binding domain 100 185 3.2E-22 T 28-03-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AM393_RS25575 16db6fc89008a3471ba411e239ba5b93 211 Pfam PF00677 Lumazine binding domain 3 87 8.5E-22 T 28-03-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AM393_RS16010 4611eb535bff3ea0add9de30cdaf0a81 459 PIRSF PIRSF006060 1 455 6.4E-70 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AM393_RS16010 4611eb535bff3ea0add9de30cdaf0a81 459 Pfam PF13520 Amino acid permease 13 419 3.6E-41 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AM393_RS16010 4611eb535bff3ea0add9de30cdaf0a81 459 TIGRFAM TIGR00908 2A0305: ethanolamine permease 6 451 1.1E-183 T 28-03-2018 IPR004757 Ethanolamine permease AM393_RS09260 ce0090a0eb18a845750dc6db25f3466c 327 Pfam PF00005 ABC transporter 24 181 7.4E-28 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS09260 ce0090a0eb18a845750dc6db25f3466c 327 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 231 317 8.9E-28 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AM393_RS09260 ce0090a0eb18a845750dc6db25f3466c 327 SMART SM00382 32 231 9.6E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS09260 ce0090a0eb18a845750dc6db25f3466c 327 Gene3D G3DSA:3.40.50.300 1 324 3.0E-76 T 28-03-2018 AM393_RS09260 ce0090a0eb18a845750dc6db25f3466c 327 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 297 2.6E-19 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AM393_RS09260 ce0090a0eb18a845750dc6db25f3466c 327 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS09260 ce0090a0eb18a845750dc6db25f3466c 327 SUPERFAMILY SSF52540 3 253 2.54E-65 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS12890 937150f1d5f88693220eb3b3d13d7731 101 Gene3D G3DSA:3.40.50.2300 1 97 8.5E-18 T 28-03-2018 AM393_RS12890 937150f1d5f88693220eb3b3d13d7731 101 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 4 79 1.2E-13 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AM393_RS12890 937150f1d5f88693220eb3b3d13d7731 101 SUPERFAMILY SSF52794 3 95 1.49E-17 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AM393_RS16270 3cf404fb4c8c5b8ed152ba92ef609404 323 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 17 303 28.297 T 28-03-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 AM393_RS16270 3cf404fb4c8c5b8ed152ba92ef609404 323 PRINTS PR01755 Bacterial translocase SecF protein signature 44 59 1.3E-30 T 28-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AM393_RS16270 3cf404fb4c8c5b8ed152ba92ef609404 323 PRINTS PR01755 Bacterial translocase SecF protein signature 208 226 1.3E-30 T 28-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AM393_RS16270 3cf404fb4c8c5b8ed152ba92ef609404 323 PRINTS PR01755 Bacterial translocase SecF protein signature 160 174 1.3E-30 T 28-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AM393_RS16270 3cf404fb4c8c5b8ed152ba92ef609404 323 PRINTS PR01755 Bacterial translocase SecF protein signature 240 255 1.3E-30 T 28-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AM393_RS16270 3cf404fb4c8c5b8ed152ba92ef609404 323 Pfam PF02355 Protein export membrane protein 117 301 9.1E-69 T 28-03-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial AM393_RS16270 3cf404fb4c8c5b8ed152ba92ef609404 323 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 126 289 6.2E-55 T 28-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AM393_RS16270 3cf404fb4c8c5b8ed152ba92ef609404 323 Gene3D G3DSA:1.20.1640.10 69 313 3.3E-33 T 28-03-2018 AM393_RS16270 3cf404fb4c8c5b8ed152ba92ef609404 323 SUPERFAMILY SSF82866 78 303 4.45E-41 T 28-03-2018 AM393_RS16270 3cf404fb4c8c5b8ed152ba92ef609404 323 Pfam PF07549 SecD/SecF GG Motif 40 66 1.1E-11 T 28-03-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site AM393_RS16270 3cf404fb4c8c5b8ed152ba92ef609404 323 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 45 292 4.4E-88 T 28-03-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 AM393_RS00140 00fb81da7dc9e010f457f141e88ea877 158 Gene3D G3DSA:3.40.630.30 87 154 1.9E-14 T 28-03-2018 AM393_RS00140 00fb81da7dc9e010f457f141e88ea877 158 Gene3D G3DSA:3.40.630.30 1 86 2.2E-23 T 28-03-2018 AM393_RS00140 00fb81da7dc9e010f457f141e88ea877 158 SUPERFAMILY SSF55729 3 150 1.25E-39 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM393_RS00140 00fb81da7dc9e010f457f141e88ea877 158 Pfam PF00583 Acetyltransferase (GNAT) family 31 133 1.2E-18 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AM393_RS23540 ec844809001efd2273e4b450890365df 382 SUPERFAMILY SSF56796 6 378 5.1E-93 T 28-03-2018 AM393_RS23540 ec844809001efd2273e4b450890365df 382 Gene3D G3DSA:1.20.1090.10 178 382 1.2E-50 T 28-03-2018 AM393_RS23540 ec844809001efd2273e4b450890365df 382 Gene3D G3DSA:3.40.50.1970 6 177 2.9E-33 T 28-03-2018 AM393_RS23540 ec844809001efd2273e4b450890365df 382 Pfam PF00465 Iron-containing alcohol dehydrogenase 7 370 8.2E-94 T 28-03-2018 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 AM393_RS26200 5b6200f4b5f9f4881ca9ddeef210796b 288 PRINTS PR00111 Alpha/beta hydrolase fold signature 231 245 7.7E-24 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM393_RS26200 5b6200f4b5f9f4881ca9ddeef210796b 288 PRINTS PR00111 Alpha/beta hydrolase fold signature 65 80 7.7E-24 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM393_RS26200 5b6200f4b5f9f4881ca9ddeef210796b 288 PRINTS PR00111 Alpha/beta hydrolase fold signature 124 137 7.7E-24 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM393_RS26200 5b6200f4b5f9f4881ca9ddeef210796b 288 PRINTS PR00111 Alpha/beta hydrolase fold signature 110 123 7.7E-24 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM393_RS26200 5b6200f4b5f9f4881ca9ddeef210796b 288 PRINTS PR00412 Epoxide hydrolase signature 65 80 2.4E-6 T 28-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AM393_RS26200 5b6200f4b5f9f4881ca9ddeef210796b 288 PRINTS PR00412 Epoxide hydrolase signature 262 284 2.4E-6 T 28-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AM393_RS26200 5b6200f4b5f9f4881ca9ddeef210796b 288 PRINTS PR00412 Epoxide hydrolase signature 124 137 2.4E-6 T 28-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AM393_RS26200 5b6200f4b5f9f4881ca9ddeef210796b 288 SUPERFAMILY SSF53474 5 287 7.84E-64 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AM393_RS26200 5b6200f4b5f9f4881ca9ddeef210796b 288 Gene3D G3DSA:3.40.50.1820 6 288 1.0E-57 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AM393_RS26200 5b6200f4b5f9f4881ca9ddeef210796b 288 Pfam PF00561 alpha/beta hydrolase fold 38 273 7.6E-23 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM393_RS26200 5b6200f4b5f9f4881ca9ddeef210796b 288 Hamap MF_01654 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate hydrolase [mhpC]. 2 287 70.33 T 28-03-2018 IPR023791 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate hydrolase GO:0005737|GO:0016787|GO:0018771|GO:0019439|GO:0042803 KEGG: 00360+3.7.1.14|MetaCyc: PWY-6690 AM393_RS11260 c9155114f073f81ca870510ac3b0f79c 499 Gene3D G3DSA:3.30.420.150 120 298 8.2E-33 T 28-03-2018 AM393_RS11260 c9155114f073f81ca870510ac3b0f79c 499 PIRSF PIRSF001267 1 495 2.5E-182 T 28-03-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 AM393_RS11260 c9155114f073f81ca870510ac3b0f79c 499 SUPERFAMILY SSF53067 131 299 1.55E-40 T 28-03-2018 AM393_RS11260 c9155114f073f81ca870510ac3b0f79c 499 SUPERFAMILY SSF109604 306 491 1.02E-43 T 28-03-2018 AM393_RS11260 c9155114f073f81ca870510ac3b0f79c 499 Gene3D G3DSA:3.30.420.40 1 119 2.5E-40 T 28-03-2018 AM393_RS11260 c9155114f073f81ca870510ac3b0f79c 499 Pfam PF02541 Ppx/GppA phosphatase family 20 300 3.7E-100 T 28-03-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 AM393_RS11260 c9155114f073f81ca870510ac3b0f79c 499 Hamap MF_01550 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [gppA]. 1 493 54.85 T 28-03-2018 IPR023709 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase GO:0008894|GO:0015974 KEGG: 00230+3.6.1.40 AM393_RS11260 c9155114f073f81ca870510ac3b0f79c 499 SUPERFAMILY SSF53067 6 127 1.49E-37 T 28-03-2018 AM393_RS23845 2ecf4c60332b53c040c1090ab631faf1 481 SUPERFAMILY SSF103473 10 458 5.89E-76 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS23845 2ecf4c60332b53c040c1090ab631faf1 481 ProSitePatterns PS00216 Sugar transport proteins signature 1. 72 89 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM393_RS23845 2ecf4c60332b53c040c1090ab631faf1 481 Gene3D G3DSA:1.20.1250.20 237 474 1.9E-33 T 28-03-2018 AM393_RS23845 2ecf4c60332b53c040c1090ab631faf1 481 Gene3D G3DSA:1.20.1250.20 10 213 2.1E-38 T 28-03-2018 AM393_RS23845 2ecf4c60332b53c040c1090ab631faf1 481 PRINTS PR00171 Sugar transporter signature 26 36 1.3E-19 T 28-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 AM393_RS23845 2ecf4c60332b53c040c1090ab631faf1 481 PRINTS PR00171 Sugar transporter signature 109 128 1.3E-19 T 28-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 AM393_RS23845 2ecf4c60332b53c040c1090ab631faf1 481 PRINTS PR00171 Sugar transporter signature 385 397 1.3E-19 T 28-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 AM393_RS23845 2ecf4c60332b53c040c1090ab631faf1 481 PRINTS PR00171 Sugar transporter signature 362 383 1.3E-19 T 28-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 AM393_RS23845 2ecf4c60332b53c040c1090ab631faf1 481 PRINTS PR00171 Sugar transporter signature 273 283 1.3E-19 T 28-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 AM393_RS23845 2ecf4c60332b53c040c1090ab631faf1 481 TIGRFAM TIGR00879 SP: MFS transporter, sugar porter (SP) family 9 456 1.1E-101 T 28-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 AM393_RS23845 2ecf4c60332b53c040c1090ab631faf1 481 Pfam PF00083 Sugar (and other) transporter 19 459 4.9E-104 T 28-03-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 AM393_RS16000 e85bb31a4378bb50d4fedd1b0939a89e 258 Pfam PF05985 Ethanolamine ammonia-lyase light chain (EutC) 5 239 6.5E-89 T 28-03-2018 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 AM393_RS16000 e85bb31a4378bb50d4fedd1b0939a89e 258 PIRSF PIRSF018982 1 249 1.6E-90 T 28-03-2018 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 AM393_RS08855 f5841c8eddef6ec76405c210e09cfd40 255 Pfam PF00005 ABC transporter 21 181 4.3E-32 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS08855 f5841c8eddef6ec76405c210e09cfd40 255 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 233 253 5.1E-11 T 28-03-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal AM393_RS08855 f5841c8eddef6ec76405c210e09cfd40 255 SMART SM00382 30 230 3.2E-7 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS08855 f5841c8eddef6ec76405c210e09cfd40 255 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS08855 f5841c8eddef6ec76405c210e09cfd40 255 Gene3D G3DSA:3.40.50.300 1 253 4.7E-57 T 28-03-2018 AM393_RS08855 f5841c8eddef6ec76405c210e09cfd40 255 SUPERFAMILY SSF52540 4 253 4.8E-62 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS26160 c6ca2ddc81e5ad854eb9215021763f10 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 3.6E-17 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS26160 c6ca2ddc81e5ad854eb9215021763f10 297 Gene3D G3DSA:3.40.190.10 87 178 1.0E-14 T 28-03-2018 AM393_RS26160 c6ca2ddc81e5ad854eb9215021763f10 297 Gene3D G3DSA:1.10.10.10 1 85 1.1E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS26160 c6ca2ddc81e5ad854eb9215021763f10 297 SUPERFAMILY SSF53850 87 274 1.54E-29 T 28-03-2018 AM393_RS26160 c6ca2ddc81e5ad854eb9215021763f10 297 Gene3D G3DSA:3.40.190.10 179 263 8.3E-11 T 28-03-2018 AM393_RS26160 c6ca2ddc81e5ad854eb9215021763f10 297 Pfam PF03466 LysR substrate binding domain 86 272 2.2E-31 T 28-03-2018 IPR005119 LysR, substrate-binding AM393_RS26160 c6ca2ddc81e5ad854eb9215021763f10 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 9.3E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS26160 c6ca2ddc81e5ad854eb9215021763f10 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 9.3E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS26160 c6ca2ddc81e5ad854eb9215021763f10 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 9.3E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS26160 c6ca2ddc81e5ad854eb9215021763f10 297 SUPERFAMILY SSF46785 1 109 1.21E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS13045 11ba08fd073eb05fbcfc8085784fb4c1 176 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 37.128 T 28-03-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 AM393_RS13045 11ba08fd073eb05fbcfc8085784fb4c1 176 Pfam PF00719 Inorganic pyrophosphatase 18 173 1.2E-55 T 28-03-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 AM393_RS13045 11ba08fd073eb05fbcfc8085784fb4c1 176 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 28-03-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 AM393_RS13045 11ba08fd073eb05fbcfc8085784fb4c1 176 SUPERFAMILY SSF50324 4 174 1.7E-67 T 28-03-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 AM393_RS13045 11ba08fd073eb05fbcfc8085784fb4c1 176 Gene3D G3DSA:3.90.80.10 3 176 3.5E-54 T 28-03-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 AM393_RS06175 a31d2f1535b8c738a004ae9071c3cdb8 187 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 1 187 39.333 T 28-03-2018 IPR003774 Protein of unknown function UPF0301 AM393_RS06175 a31d2f1535b8c738a004ae9071c3cdb8 187 Pfam PF02622 Uncharacterized ACR, COG1678 12 174 1.4E-48 T 28-03-2018 IPR003774 Protein of unknown function UPF0301 AM393_RS06175 a31d2f1535b8c738a004ae9071c3cdb8 187 Gene3D G3DSA:3.40.1740.10 1 95 1.1E-28 T 28-03-2018 AM393_RS06175 a31d2f1535b8c738a004ae9071c3cdb8 187 Gene3D G3DSA:3.40.1740.10 102 179 1.7E-12 T 28-03-2018 AM393_RS06175 a31d2f1535b8c738a004ae9071c3cdb8 187 SUPERFAMILY SSF143456 1 187 1.44E-65 T 28-03-2018 AM393_RS28645 7cc5f77907d56ff5e67933277e1ce177 141 SUPERFAMILY SSF52833 3 137 1.47E-39 T 28-03-2018 IPR012336 Thioredoxin-like fold AM393_RS28645 7cc5f77907d56ff5e67933277e1ce177 141 Gene3D G3DSA:3.40.30.10 1 141 2.6E-45 T 28-03-2018 AM393_RS28645 7cc5f77907d56ff5e67933277e1ce177 141 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 4 116 1.6E-41 T 28-03-2018 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 AM393_RS28645 7cc5f77907d56ff5e67933277e1ce177 141 Pfam PF03960 ArsC family 7 114 4.9E-20 T 28-03-2018 IPR006660 Arsenate reductase-like AM393_RS21515 aad25b011c99a774dcdf7f00497bceee 463 Gene3D G3DSA:1.10.3860.10 21 450 1.4E-96 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM393_RS21515 aad25b011c99a774dcdf7f00497bceee 463 SUPERFAMILY SSF118215 29 443 5.1E-97 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM393_RS21515 aad25b011c99a774dcdf7f00497bceee 463 Pfam PF00375 Sodium:dicarboxylate symporter family 31 443 8.5E-103 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM393_RS21515 aad25b011c99a774dcdf7f00497bceee 463 PRINTS PR00173 Glutamate-aspartate symporter signature 75 95 1.7E-27 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM393_RS21515 aad25b011c99a774dcdf7f00497bceee 463 PRINTS PR00173 Glutamate-aspartate symporter signature 105 130 1.7E-27 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM393_RS21515 aad25b011c99a774dcdf7f00497bceee 463 PRINTS PR00173 Glutamate-aspartate symporter signature 27 47 1.7E-27 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM393_RS21515 aad25b011c99a774dcdf7f00497bceee 463 PRINTS PR00173 Glutamate-aspartate symporter signature 397 417 1.7E-27 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM393_RS21515 aad25b011c99a774dcdf7f00497bceee 463 PRINTS PR00173 Glutamate-aspartate symporter signature 260 279 1.7E-27 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM393_RS21515 aad25b011c99a774dcdf7f00497bceee 463 PRINTS PR00173 Glutamate-aspartate symporter signature 182 204 1.7E-27 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM393_RS21515 aad25b011c99a774dcdf7f00497bceee 463 PRINTS PR00173 Glutamate-aspartate symporter signature 370 389 1.7E-27 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM393_RS04860 2c228aff85bad0a527702163c0f91a25 348 Pfam PF04389 Peptidase family M28 100 325 1.3E-31 T 28-03-2018 IPR007484 Peptidase M28 AM393_RS04860 2c228aff85bad0a527702163c0f91a25 348 Gene3D G3DSA:3.40.630.10 23 342 6.1E-37 T 28-03-2018 AM393_RS04860 2c228aff85bad0a527702163c0f91a25 348 SUPERFAMILY SSF53187 41 315 3.29E-38 T 28-03-2018 AM393_RS20430 1915dcb275e59240b4bfad0d904c4781 312 SUPERFAMILY SSF103481 44 143 1.16E-10 T 28-03-2018 AM393_RS20430 1915dcb275e59240b4bfad0d904c4781 312 SUPERFAMILY SSF103481 190 287 1.07E-10 T 28-03-2018 AM393_RS20430 1915dcb275e59240b4bfad0d904c4781 312 Pfam PF00892 EamA-like transporter family 13 139 2.4E-14 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM393_RS20430 1915dcb275e59240b4bfad0d904c4781 312 Pfam PF00892 EamA-like transporter family 152 281 5.6E-13 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM393_RS21780 d669b0072946f04ed86ac1121b86d850 262 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 252 5.7E-85 T 28-03-2018 AM393_RS21780 d669b0072946f04ed86ac1121b86d850 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.6E-7 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS21780 d669b0072946f04ed86ac1121b86d850 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 1.6E-7 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS21780 d669b0072946f04ed86ac1121b86d850 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 1.6E-7 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS21780 d669b0072946f04ed86ac1121b86d850 262 PIRSF PIRSF000094 1 260 2.9E-124 T 28-03-2018 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AM393_RS21780 d669b0072946f04ed86ac1121b86d850 262 SUPERFAMILY SSF51735 6 253 5.25E-62 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS21780 d669b0072946f04ed86ac1121b86d850 262 Gene3D G3DSA:3.40.50.720 3 261 3.7E-44 T 28-03-2018 AM393_RS15720 b3899d13efdca9388ec6561fa0e4f065 249 PIRSF PIRSF034653 2 249 1.7E-110 T 28-03-2018 IPR017031 Predicted S-adenosyl-L-methionine dependent methyltransferase, YjhP-type AM393_RS15720 b3899d13efdca9388ec6561fa0e4f065 249 Pfam PF13847 Methyltransferase domain 38 154 5.0E-9 T 28-03-2018 IPR025714 Methyltransferase domain AM393_RS15720 b3899d13efdca9388ec6561fa0e4f065 249 SUPERFAMILY SSF53335 6 246 5.78E-41 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM393_RS15720 b3899d13efdca9388ec6561fa0e4f065 249 Gene3D G3DSA:3.40.50.150 2 249 3.5E-35 T 28-03-2018 AM393_RS06490 4110a7d405abd2ae15d2ec45b752295c 170 Pfam PF11072 Protein of unknown function (DUF2859) 23 168 2.3E-50 T 28-03-2018 IPR021300 Integrating conjugative element protein, PFL4695 AM393_RS06490 4110a7d405abd2ae15d2ec45b752295c 170 TIGRFAM TIGR03765 ICE_PFL_4695: integrating conjugative element protein, PFL_4695 family 66 170 2.3E-38 T 28-03-2018 IPR021300 Integrating conjugative element protein, PFL4695 AM393_RS28910 63641ce5490f895552959f50d887dab6 276 Gene3D G3DSA:3.40.710.10 26 274 1.2E-22 T 28-03-2018 AM393_RS28910 63641ce5490f895552959f50d887dab6 276 Pfam PF00905 Penicillin binding protein transpeptidase domain 42 261 1.1E-43 T 28-03-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AM393_RS28910 63641ce5490f895552959f50d887dab6 276 SUPERFAMILY SSF56601 28 275 4.66E-36 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AM393_RS28910 63641ce5490f895552959f50d887dab6 276 ProSitePatterns PS00337 Beta-lactamase class-D active site. 69 79 - T 28-03-2018 IPR002137 Beta-lactamase, class-D active site GO:0008800|GO:0017001 KEGG: 00311+3.5.2.6 AM393_RS04275 c96ac95c44ae43d15e2e68981566eb4e 136 TIGRFAM TIGR00333 nrdI: nrdI protein 5 131 1.5E-55 T 28-03-2018 IPR004465 Ribonucleotide reductase Class Ib, NrdI AM393_RS04275 c96ac95c44ae43d15e2e68981566eb4e 136 PIRSF PIRSF005087 1 136 2.4E-53 T 28-03-2018 IPR004465 Ribonucleotide reductase Class Ib, NrdI AM393_RS04275 c96ac95c44ae43d15e2e68981566eb4e 136 SUPERFAMILY SSF52218 1 131 8.03E-24 T 28-03-2018 IPR029039 Flavoprotein-like domain AM393_RS04275 c96ac95c44ae43d15e2e68981566eb4e 136 Pfam PF07972 NrdI Flavodoxin like 5 122 2.6E-45 T 28-03-2018 IPR004465 Ribonucleotide reductase Class Ib, NrdI AM393_RS04275 c96ac95c44ae43d15e2e68981566eb4e 136 Hamap MF_00128 Protein NrdI [nrdI]. 3 132 36.64 T 28-03-2018 IPR020852 Ribonucleotide reductase, class Ib, NrdI, bacterial AM393_RS04275 c96ac95c44ae43d15e2e68981566eb4e 136 Gene3D G3DSA:3.40.50.360 3 131 2.3E-26 T 28-03-2018 IPR029039 Flavoprotein-like domain AM393_RS14590 cefbe997f898cf101bcb982c06ac856c 282 SUPERFAMILY SSF56300 1 260 2.81E-57 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like AM393_RS14590 cefbe997f898cf101bcb982c06ac856c 282 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 1 278 3.4E-167 T 28-03-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 AM393_RS14590 cefbe997f898cf101bcb982c06ac856c 282 PIRSF PIRSF000903 1 275 3.2E-125 T 28-03-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 AM393_RS14590 cefbe997f898cf101bcb982c06ac856c 282 Pfam PF00149 Calcineurin-like phosphoesterase 2 161 2.5E-14 T 28-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AM393_RS14590 cefbe997f898cf101bcb982c06ac856c 282 Hamap MF_00199 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical [apaH]. 1 271 52.459 T 28-03-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 AM393_RS14590 cefbe997f898cf101bcb982c06ac856c 282 Gene3D G3DSA:3.60.21.10 1 281 1.3E-48 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like AM393_RS17660 3d26375eefe9dbbfd612936e9ba2959e 326 Gene3D G3DSA:3.40.50.2300 165 326 5.4E-53 T 28-03-2018 AM393_RS17660 3d26375eefe9dbbfd612936e9ba2959e 326 Gene3D G3DSA:1.10.260.40 1 56 5.2E-23 T 28-03-2018 AM393_RS17660 3d26375eefe9dbbfd612936e9ba2959e 326 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 12 22 7.9E-5 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM393_RS17660 3d26375eefe9dbbfd612936e9ba2959e 326 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 2 12 7.9E-5 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM393_RS17660 3d26375eefe9dbbfd612936e9ba2959e 326 Pfam PF13377 Periplasmic binding protein-like domain 166 326 6.2E-42 T 28-03-2018 AM393_RS17660 3d26375eefe9dbbfd612936e9ba2959e 326 SUPERFAMILY SSF47413 2 58 2.53E-18 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM393_RS17660 3d26375eefe9dbbfd612936e9ba2959e 326 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 47 6.4E-20 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM393_RS17660 3d26375eefe9dbbfd612936e9ba2959e 326 SMART SM00354 1 70 5.6E-27 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM393_RS17660 3d26375eefe9dbbfd612936e9ba2959e 326 Gene3D G3DSA:3.40.50.2300 57 164 9.0E-22 T 28-03-2018 AM393_RS17660 3d26375eefe9dbbfd612936e9ba2959e 326 SUPERFAMILY SSF53822 60 326 1.85E-70 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AM393_RS21980 8a22fd7506f038d1f5ad9d50c35286b0 182 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 6 180 1.8E-53 T 28-03-2018 IPR006286 Peptidase C56, PfpI AM393_RS21980 8a22fd7506f038d1f5ad9d50c35286b0 182 Pfam PF01965 DJ-1/PfpI family 5 177 9.4E-47 T 28-03-2018 IPR002818 DJ-1/PfpI AM393_RS21980 8a22fd7506f038d1f5ad9d50c35286b0 182 Gene3D G3DSA:3.40.50.880 2 182 9.5E-40 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AM393_RS21980 8a22fd7506f038d1f5ad9d50c35286b0 182 SUPERFAMILY SSF52317 7 180 9.46E-48 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AM393_RS25255 f354895ec38467ab326015638243ee36 298 SUPERFAMILY SSF103481 191 286 1.11E-9 T 28-03-2018 AM393_RS25255 f354895ec38467ab326015638243ee36 298 SUPERFAMILY SSF103481 35 137 3.4E-14 T 28-03-2018 AM393_RS25255 f354895ec38467ab326015638243ee36 298 Pfam PF00892 EamA-like transporter family 149 284 1.3E-15 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM393_RS25255 f354895ec38467ab326015638243ee36 298 Pfam PF00892 EamA-like transporter family 4 134 2.1E-10 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM393_RS20835 3edc09d0ecf991a75a4454243e325388 434 Gene3D G3DSA:3.50.50.60 5 159 8.4E-16 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS20835 3edc09d0ecf991a75a4454243e325388 434 SUPERFAMILY SSF51905 6 224 2.79E-32 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS20835 3edc09d0ecf991a75a4454243e325388 434 SUPERFAMILY SSF51905 168 352 4.49E-27 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS20835 3edc09d0ecf991a75a4454243e325388 434 Gene3D G3DSA:3.50.50.60 168 370 3.6E-33 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS20835 3edc09d0ecf991a75a4454243e325388 434 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 338 1.2E-69 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS20835 3edc09d0ecf991a75a4454243e325388 434 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 115 133 5.6E-15 T 28-03-2018 AM393_RS20835 3edc09d0ecf991a75a4454243e325388 434 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 5.6E-15 T 28-03-2018 AM393_RS20835 3edc09d0ecf991a75a4454243e325388 434 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 172 190 5.6E-15 T 28-03-2018 AM393_RS20835 3edc09d0ecf991a75a4454243e325388 434 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 295 317 5.6E-15 T 28-03-2018 AM393_RS20835 3edc09d0ecf991a75a4454243e325388 434 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 172 197 7.3E-8 T 28-03-2018 AM393_RS20835 3edc09d0ecf991a75a4454243e325388 434 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 310 317 7.3E-8 T 28-03-2018 AM393_RS20835 3edc09d0ecf991a75a4454243e325388 434 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 7.3E-8 T 28-03-2018 AM393_RS21435 e71101a9eab7a8da5f7fec9150bdd2dc 344 TIGRFAM TIGR03243 arg_catab_AOST: arginine and ornithine succinyltransferase subunits 3 337 1.7E-147 T 28-03-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 AM393_RS21435 e71101a9eab7a8da5f7fec9150bdd2dc 344 Gene3D G3DSA:2.40.40.20 277 337 1.2E-23 T 28-03-2018 AM393_RS21435 e71101a9eab7a8da5f7fec9150bdd2dc 344 TIGRFAM TIGR03244 arg_catab_AstA: arginine N-succinyltransferase 3 337 8.1E-158 T 28-03-2018 IPR017650 Arginine N-succinyltransferase GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 AM393_RS21435 e71101a9eab7a8da5f7fec9150bdd2dc 344 Gene3D G3DSA:3.40.630.30 1 276 4.7E-27 T 28-03-2018 AM393_RS21435 e71101a9eab7a8da5f7fec9150bdd2dc 344 Pfam PF04958 Arginine N-succinyltransferase beta subunit 1 335 1.6E-144 T 28-03-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 AM393_RS21435 e71101a9eab7a8da5f7fec9150bdd2dc 344 SUPERFAMILY SSF55729 1 337 2.13E-133 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM393_RS21435 e71101a9eab7a8da5f7fec9150bdd2dc 344 Hamap MF_01171 Arginine N-succinyltransferase [astA]. 1 343 70.465 T 28-03-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 AM393_RS07790 8be67b346a28386fbd5d72a8560b6042 132 Pfam PF06295 Protein of unknown function (DUF1043) 6 126 3.9E-48 T 28-03-2018 IPR009386 Protein of unknown function DUF1043 AM393_RS07790 8be67b346a28386fbd5d72a8560b6042 132 PIRSF PIRSF006318 1 132 1.4E-51 T 28-03-2018 IPR009386 Protein of unknown function DUF1043 AM393_RS05340 44d9b416e56cc469d4f04f98cf0cbfff 300 Pfam PF00288 GHMP kinases N terminal domain 84 132 4.1E-8 T 28-03-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 AM393_RS05340 44d9b416e56cc469d4f04f98cf0cbfff 300 Gene3D G3DSA:3.30.230.10 33 153 8.2E-15 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AM393_RS05340 44d9b416e56cc469d4f04f98cf0cbfff 300 SUPERFAMILY SSF54211 15 165 1.97E-19 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM393_RS05340 44d9b416e56cc469d4f04f98cf0cbfff 300 PIRSF PIRSF033887 4 284 1.6E-67 T 28-03-2018 IPR012363 Propanediol utilisation/coumermycin biosynthesis, PduX-related KEGG: 00040+2.7.1.17|KEGG: 00860+2.7.1.177|MetaCyc: PWY-5443 AM393_RS20070 8a1f94343e99bd0a293bd2b64a46690b 215 SUPERFAMILY SSF56281 2 209 1.06E-60 T 28-03-2018 IPR001279 Metallo-beta-lactamase AM393_RS20070 8a1f94343e99bd0a293bd2b64a46690b 215 Pfam PF00753 Metallo-beta-lactamase superfamily 10 192 9.1E-32 T 28-03-2018 IPR001279 Metallo-beta-lactamase AM393_RS20070 8a1f94343e99bd0a293bd2b64a46690b 215 Gene3D G3DSA:3.60.15.10 1 213 9.2E-45 T 28-03-2018 IPR001279 Metallo-beta-lactamase AM393_RS20070 8a1f94343e99bd0a293bd2b64a46690b 215 SMART SM00849 12 192 3.3E-42 T 28-03-2018 IPR001279 Metallo-beta-lactamase AM393_RS28905 ce6ac2f8901e15c3cecb84dd2c004947 184 SUPERFAMILY SSF55729 5 175 2.66E-47 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM393_RS28905 ce6ac2f8901e15c3cecb84dd2c004947 184 Pfam PF13523 Acetyltransferase (GNAT) domain 15 161 1.0E-40 T 28-03-2018 AM393_RS28905 ce6ac2f8901e15c3cecb84dd2c004947 184 TIGRFAM TIGR04431 N6_acetyl_AAC6: aminoglycoside N(6')-acetyltransferase, AacA4 family 2 184 6.6E-115 T 28-03-2018 IPR030971 Aminoglycoside N(6')-acetyltransferase, AacA4 type AM393_RS28905 ce6ac2f8901e15c3cecb84dd2c004947 184 Gene3D G3DSA:3.40.630.30 1 184 7.4E-33 T 28-03-2018 AM393_RS08720 3dc867b43104f19d5199aa3e6b275c57 99 SMART SM00530 31 86 4.3E-10 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM393_RS08720 3dc867b43104f19d5199aa3e6b275c57 99 Pfam PF13744 Helix-turn-helix domain 9 87 1.9E-12 T 28-03-2018 AM393_RS08720 3dc867b43104f19d5199aa3e6b275c57 99 SUPERFAMILY SSF47413 30 90 2.04E-15 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM393_RS08720 3dc867b43104f19d5199aa3e6b275c57 99 Gene3D G3DSA:3.30.1190.10 50 97 3.3E-11 T 28-03-2018 AM393_RS08720 3dc867b43104f19d5199aa3e6b275c57 99 Gene3D G3DSA:1.10.10.60 3 49 2.3E-8 T 28-03-2018 AM393_RS28650 28b477bf274813e7abf06279ab090215 134 Pfam PF02374 Anion-transporting ATPase 33 133 8.0E-10 T 28-03-2018 IPR025723 Anion-transporting ATPase-like domain Reactome: R-HSA-381038 AM393_RS28650 28b477bf274813e7abf06279ab090215 134 Gene3D G3DSA:3.40.50.300 22 134 2.1E-12 T 28-03-2018 AM393_RS28650 28b477bf274813e7abf06279ab090215 134 SUPERFAMILY SSF52540 35 114 2.96E-5 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS22615 cd4f1ddc2c567b3f63c7864fc4853500 107 Pfam PF07027 Protein of unknown function (DUF1318) 19 107 5.3E-30 T 28-03-2018 IPR008309 Uncharacterised conserved protein UCP025560 AM393_RS22615 cd4f1ddc2c567b3f63c7864fc4853500 107 PIRSF PIRSF025560 1 107 3.3E-39 T 28-03-2018 IPR008309 Uncharacterised conserved protein UCP025560 AM393_RS05250 51831e927e56ce4984f4f5b8516ca19a 554 ProDom PD025428 SUBUNIT GLYCEROL DEHYDRATASE LARGE LYASE DHAB ALPHA DIOL B12-DEPENDENT METABOLISM 8 549 0.0 T 28-03-2018 IPR003206 Diol/glycerol dehydratase, large subunit GO:0008152|GO:0016836|GO:0031419|GO:0050215 AM393_RS05250 51831e927e56ce4984f4f5b8516ca19a 554 PIRSF PIRSF018507 1 554 0.0 T 28-03-2018 IPR003206 Diol/glycerol dehydratase, large subunit GO:0008152|GO:0016836|GO:0031419|GO:0050215 AM393_RS05250 51831e927e56ce4984f4f5b8516ca19a 554 Pfam PF02286 Dehydratase large subunit 1 551 0.0 T 28-03-2018 IPR003206 Diol/glycerol dehydratase, large subunit GO:0008152|GO:0016836|GO:0031419|GO:0050215 AM393_RS05250 51831e927e56ce4984f4f5b8516ca19a 554 Gene3D G3DSA:3.20.20.350 2 553 0.0 T 28-03-2018 IPR003206 Diol/glycerol dehydratase, large subunit GO:0008152|GO:0016836|GO:0031419|GO:0050215 AM393_RS05250 51831e927e56ce4984f4f5b8516ca19a 554 SUPERFAMILY SSF51703 1 553 5.1E-292 T 28-03-2018 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0008152|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 AM393_RS25965 30b01fc919ffd2b49ca16f4333273a69 152 Pfam PF03918 Cytochrome C biogenesis protein 8 146 4.7E-54 T 28-03-2018 IPR005616 CcmH/CycL/Ccl2/NrfF family AM393_RS25965 30b01fc919ffd2b49ca16f4333273a69 152 Gene3D G3DSA:1.10.10.60 131 151 0.23 T 28-03-2018 AM393_RS03305 9e4154b781d64e36795ce1f86db8d2e6 759 SUPERFAMILY SSF53223 10 161 5.9E-54 T 28-03-2018 AM393_RS03305 9e4154b781d64e36795ce1f86db8d2e6 759 SMART SM00919 163 401 6.7E-143 T 28-03-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 AM393_RS03305 9e4154b781d64e36795ce1f86db8d2e6 759 SMART SM01274 18 151 4.9E-82 T 28-03-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AM393_RS03305 9e4154b781d64e36795ce1f86db8d2e6 759 Pfam PF01515 Phosphate acetyl/butaryl transferase 430 751 1.2E-101 T 28-03-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 AM393_RS03305 9e4154b781d64e36795ce1f86db8d2e6 759 Pfam PF03949 Malic enzyme, NAD binding domain 165 360 9.2E-22 T 28-03-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 AM393_RS03305 9e4154b781d64e36795ce1f86db8d2e6 759 Gene3D G3DSA:3.40.50.10380 5 160 4.2E-36 T 28-03-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AM393_RS03305 9e4154b781d64e36795ce1f86db8d2e6 759 Gene3D G3DSA:3.40.50.720 161 446 4.5E-86 T 28-03-2018 AM393_RS03305 9e4154b781d64e36795ce1f86db8d2e6 759 Gene3D G3DSA:3.40.718.10 447 716 2.2E-49 T 28-03-2018 AM393_RS03305 9e4154b781d64e36795ce1f86db8d2e6 759 SUPERFAMILY SSF51735 163 453 3.65E-88 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS03305 9e4154b781d64e36795ce1f86db8d2e6 759 ProSitePatterns PS00331 Malic enzymes signature. 159 175 - T 28-03-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 AM393_RS03305 9e4154b781d64e36795ce1f86db8d2e6 759 PIRSF PIRSF036684 1 758 0.0 T 28-03-2018 IPR012188 NAD(P)-dependent malic enzyme GO:0004470|GO:0006108|GO:0046872 KEGG: 00620+1.1.1.40|KEGG: 00710+1.1.1.40|MetaCyc: PWY-241|MetaCyc: PWY-7117 AM393_RS03305 9e4154b781d64e36795ce1f86db8d2e6 759 SUPERFAMILY SSF53659 430 754 2.63E-92 T 28-03-2018 AM393_RS03305 9e4154b781d64e36795ce1f86db8d2e6 759 Pfam PF00390 Malic enzyme, N-terminal domain 19 151 1.6E-28 T 28-03-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AM393_RS26930 4e940ee85ca6160530360bd8f450bbf2 88 Pfam PF05488 PAAR motif 9 80 4.5E-23 T 28-03-2018 IPR008727 PAAR motif AM393_RS10480 9638c928f07016dda5865d332d2dfb04 346 PIRSF PIRSF002756 1 338 4.0E-107 T 28-03-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 AM393_RS10480 9638c928f07016dda5865d332d2dfb04 346 Pfam PF12849 PBP superfamily domain 25 307 2.4E-61 T 28-03-2018 IPR024370 PBP domain AM393_RS10480 9638c928f07016dda5865d332d2dfb04 346 TIGRFAM TIGR00975 3a0107s03: phosphate ABC transporter, phosphate-binding protein PstS 29 335 5.0E-128 T 28-03-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 AM393_RS10480 9638c928f07016dda5865d332d2dfb04 346 Gene3D G3DSA:3.40.190.10 26 160 9.0E-31 T 28-03-2018 AM393_RS10480 9638c928f07016dda5865d332d2dfb04 346 Gene3D G3DSA:3.40.190.10 161 337 2.8E-26 T 28-03-2018 AM393_RS10480 9638c928f07016dda5865d332d2dfb04 346 SUPERFAMILY SSF53850 28 338 3.78E-96 T 28-03-2018 AM393_RS17695 c435494dc3f9d54d52de72eebca50289 328 Pfam PF01380 SIS domain 24 120 1.8E-10 T 28-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AM393_RS17695 c435494dc3f9d54d52de72eebca50289 328 PIRSF PIRSF009290 2 328 2.0E-88 T 28-03-2018 IPR024713 Fructosamine deglycase FrlB AM393_RS17695 c435494dc3f9d54d52de72eebca50289 328 Gene3D G3DSA:3.40.50.10490 157 316 2.0E-15 T 28-03-2018 AM393_RS17695 c435494dc3f9d54d52de72eebca50289 328 Gene3D G3DSA:3.40.50.10490 2 155 3.4E-25 T 28-03-2018 AM393_RS17695 c435494dc3f9d54d52de72eebca50289 328 SUPERFAMILY SSF53697 17 328 6.22E-56 T 28-03-2018 AM393_RS18875 7833a902889a1566d521adc33a9f40e6 352 ProSitePatterns PS00211 ABC transporters family signature. 129 143 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS18875 7833a902889a1566d521adc33a9f40e6 352 Gene3D G3DSA:2.40.50.100 278 346 8.1E-19 T 28-03-2018 AM393_RS18875 7833a902889a1566d521adc33a9f40e6 352 SUPERFAMILY SSF50331 234 350 1.55E-23 T 28-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal AM393_RS18875 7833a902889a1566d521adc33a9f40e6 352 SUPERFAMILY SSF52540 9 220 7.64E-58 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS18875 7833a902889a1566d521adc33a9f40e6 352 Gene3D G3DSA:3.40.50.300 17 277 8.1E-55 T 28-03-2018 AM393_RS18875 7833a902889a1566d521adc33a9f40e6 352 SMART SM00382 23 206 5.3E-10 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS18875 7833a902889a1566d521adc33a9f40e6 352 TIGRFAM TIGR02142 modC_ABC: molybdate ABC transporter, ATP-binding protein 2 350 1.6E-155 T 28-03-2018 IPR011868 Molybdate ABC transporter, ATP-binding protein GO:0005524|GO:0015098|GO:0015689|GO:0016020 AM393_RS18875 7833a902889a1566d521adc33a9f40e6 352 Pfam PF00005 ABC transporter 19 156 1.6E-29 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS18875 7833a902889a1566d521adc33a9f40e6 352 Pfam PF03459 TOBE domain 290 350 4.9E-17 T 28-03-2018 IPR005116 Transport-associated OB, type 1 AM393_RS22840 9d0ac9dae039c1b907218d57728acba1 402 Pfam PF04143 Sulphur transport 3 160 3.7E-25 T 28-03-2018 IPR007272 Sulphur transport domain AM393_RS22840 9d0ac9dae039c1b907218d57728acba1 402 Pfam PF04143 Sulphur transport 237 386 2.9E-22 T 28-03-2018 IPR007272 Sulphur transport domain AM393_RS04010 442f4e64b45d19d5c5b9c72775d8c41a 196 Pfam PF01025 GrpE 35 194 5.3E-47 T 28-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AM393_RS04010 442f4e64b45d19d5c5b9c72775d8c41a 196 SUPERFAMILY SSF51064 139 194 1.7E-16 T 28-03-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 AM393_RS04010 442f4e64b45d19d5c5b9c72775d8c41a 196 ProSitePatterns PS01071 grpE protein signature. 149 192 - T 28-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AM393_RS04010 442f4e64b45d19d5c5b9c72775d8c41a 196 Gene3D G3DSA:2.30.22.10 138 194 3.9E-19 T 28-03-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 AM393_RS04010 442f4e64b45d19d5c5b9c72775d8c41a 196 PRINTS PR00773 GrpE protein signature 146 161 2.0E-25 T 28-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AM393_RS04010 442f4e64b45d19d5c5b9c72775d8c41a 196 PRINTS PR00773 GrpE protein signature 91 106 2.0E-25 T 28-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AM393_RS04010 442f4e64b45d19d5c5b9c72775d8c41a 196 PRINTS PR00773 GrpE protein signature 63 79 2.0E-25 T 28-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AM393_RS04010 442f4e64b45d19d5c5b9c72775d8c41a 196 PRINTS PR00773 GrpE protein signature 173 192 2.0E-25 T 28-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AM393_RS04010 442f4e64b45d19d5c5b9c72775d8c41a 196 SUPERFAMILY SSF58014 43 138 2.88E-26 T 28-03-2018 AM393_RS04010 442f4e64b45d19d5c5b9c72775d8c41a 196 Gene3D G3DSA:3.90.20.20 34 137 1.4E-29 T 28-03-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 AM393_RS04010 442f4e64b45d19d5c5b9c72775d8c41a 196 Hamap MF_01151 Protein GrpE [grpE]. 3 194 20.531 T 28-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AM393_RS14205 e5956e40524fc117696807448ec664c5 264 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 129 139 - T 28-03-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 AM393_RS14205 e5956e40524fc117696807448ec664c5 264 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 5 13 - T 28-03-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 AM393_RS14205 e5956e40524fc117696807448ec664c5 264 Pfam PF01026 TatD related DNase 6 257 8.9E-68 T 28-03-2018 IPR001130 TatD family GO:0016788 AM393_RS14205 e5956e40524fc117696807448ec664c5 264 SUPERFAMILY SSF51556 5 259 5.97E-78 T 28-03-2018 IPR032466 Metal-dependent hydrolase AM393_RS14205 e5956e40524fc117696807448ec664c5 264 Gene3D G3DSA:3.20.20.140 3 263 2.2E-77 T 28-03-2018 AM393_RS14205 e5956e40524fc117696807448ec664c5 264 PIRSF PIRSF005902 1 261 1.8E-70 T 28-03-2018 IPR001130 TatD family GO:0016788 AM393_RS03835 fd4794280e9e059862b61edda700fe78 229 SUPERFAMILY SSF52141 4 220 5.01E-96 T 28-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AM393_RS03835 fd4794280e9e059862b61edda700fe78 229 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 4 221 40.481 T 28-03-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AM393_RS03835 fd4794280e9e059862b61edda700fe78 229 Gene3D G3DSA:3.40.470.10 1 229 3.7E-105 T 28-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AM393_RS03835 fd4794280e9e059862b61edda700fe78 229 Pfam PF03167 Uracil DNA glycosylase superfamily 55 209 2.5E-27 T 28-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AM393_RS03835 fd4794280e9e059862b61edda700fe78 229 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 57 66 - T 28-03-2018 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AM393_RS03835 fd4794280e9e059862b61edda700fe78 229 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 6 213 2.6E-89 T 28-03-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AM393_RS03835 fd4794280e9e059862b61edda700fe78 229 SMART SM00986 49 210 5.4E-41 T 28-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AM393_RS03835 fd4794280e9e059862b61edda700fe78 229 SMART SM00987 49 210 5.4E-41 T 28-03-2018 AM393_RS21610 ad03b5e4ec0984d98f60686841cc45d2 362 TIGRFAM TIGR02089 TTC: tartrate dehydrogenase 1 351 1.5E-177 T 28-03-2018 IPR011829 Tartrate dehydrogenase GO:0016616|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.93|KEGG: 00650+1.1.1.83 AM393_RS21610 ad03b5e4ec0984d98f60686841cc45d2 362 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 242 261 - T 28-03-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 AM393_RS21610 ad03b5e4ec0984d98f60686841cc45d2 362 SUPERFAMILY SSF53659 2 352 6.34E-113 T 28-03-2018 AM393_RS21610 ad03b5e4ec0984d98f60686841cc45d2 362 Gene3D G3DSA:3.40.718.10 211 353 9.1E-56 T 28-03-2018 AM393_RS21610 ad03b5e4ec0984d98f60686841cc45d2 362 Gene3D G3DSA:3.40.718.10 1 210 1.4E-66 T 28-03-2018 AM393_RS21610 ad03b5e4ec0984d98f60686841cc45d2 362 SMART SM01329 5 348 1.5E-168 T 28-03-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 AM393_RS21610 ad03b5e4ec0984d98f60686841cc45d2 362 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 5 348 4.5E-86 T 28-03-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 AM393_RS13740 b17e9bd1be8a66f6b7631e69564a7311 494 Pfam PF00005 ABC transporter 270 424 1.9E-23 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS13740 b17e9bd1be8a66f6b7631e69564a7311 494 Pfam PF00005 ABC transporter 20 169 1.8E-26 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS13740 b17e9bd1be8a66f6b7631e69564a7311 494 Gene3D G3DSA:3.40.50.300 251 489 1.3E-36 T 28-03-2018 AM393_RS13740 b17e9bd1be8a66f6b7631e69564a7311 494 SUPERFAMILY SSF52540 3 229 1.0E-52 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS13740 b17e9bd1be8a66f6b7631e69564a7311 494 ProSitePatterns PS00211 ABC transporters family signature. 397 411 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS13740 b17e9bd1be8a66f6b7631e69564a7311 494 SUPERFAMILY SSF52540 256 480 5.43E-44 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS13740 b17e9bd1be8a66f6b7631e69564a7311 494 Gene3D G3DSA:3.40.50.300 1 240 4.9E-51 T 28-03-2018 AM393_RS13740 b17e9bd1be8a66f6b7631e69564a7311 494 SMART SM00382 29 217 5.1E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS13740 b17e9bd1be8a66f6b7631e69564a7311 494 SMART SM00382 278 473 0.22 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS25375 9b35f532dba466f02d741ca155305ce7 456 SUPERFAMILY SSF51445 3 453 7.45E-169 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily AM393_RS25375 9b35f532dba466f02d741ca155305ce7 456 Pfam PF00232 Glycosyl hydrolase family 1 3 453 7.5E-173 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AM393_RS25375 9b35f532dba466f02d741ca155305ce7 456 PRINTS PR00131 Glycosyl hydrolase family 1 signature 377 388 7.1E-20 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AM393_RS25375 9b35f532dba466f02d741ca155305ce7 456 PRINTS PR00131 Glycosyl hydrolase family 1 signature 398 415 7.1E-20 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AM393_RS25375 9b35f532dba466f02d741ca155305ce7 456 PRINTS PR00131 Glycosyl hydrolase family 1 signature 357 365 7.1E-20 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AM393_RS25375 9b35f532dba466f02d741ca155305ce7 456 PRINTS PR00131 Glycosyl hydrolase family 1 signature 422 434 7.1E-20 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AM393_RS25375 9b35f532dba466f02d741ca155305ce7 456 PRINTS PR00131 Glycosyl hydrolase family 1 signature 286 300 7.1E-20 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AM393_RS25375 9b35f532dba466f02d741ca155305ce7 456 Gene3D G3DSA:3.20.20.80 1 456 4.7E-171 T 28-03-2018 AM393_RS25375 9b35f532dba466f02d741ca155305ce7 456 TIGRFAM TIGR03356 BGL: beta-galactosidase 4 445 7.1E-156 T 28-03-2018 IPR017736 Glycoside hydrolase, family 1, beta-glucosidase GO:0008422|GO:0030245 KEGG: 00460+3.2.1.21|KEGG: 00500+3.2.1.21|KEGG: 00940+3.2.1.21|MetaCyc: PWY-3121|MetaCyc: PWY-5176|MetaCyc: PWY-6002|MetaCyc: PWY-6788|MetaCyc: PWY-7091|MetaCyc: PWY-7092 AM393_RS25375 9b35f532dba466f02d741ca155305ce7 456 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 8 22 - T 28-03-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site AM393_RS25375 9b35f532dba466f02d741ca155305ce7 456 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 357 365 - T 28-03-2018 IPR018120 Glycoside hydrolase family 1, active site AM393_RS13080 6c67367e34e8ca79e08beb5c32ff040d 175 Gene3D G3DSA:3.40.630.30 2 150 7.7E-17 T 28-03-2018 AM393_RS13080 6c67367e34e8ca79e08beb5c32ff040d 175 Pfam PF13673 Acetyltransferase (GNAT) domain 29 127 1.2E-9 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AM393_RS13080 6c67367e34e8ca79e08beb5c32ff040d 175 SUPERFAMILY SSF55729 7 130 2.48E-15 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM393_RS26450 2780c9f207c5ea1e2d21cbed78880c50 480 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 2 451 2.5E-158 T 28-03-2018 IPR003846 Uncharacterised protein family UPF0061 AM393_RS26450 2780c9f207c5ea1e2d21cbed78880c50 480 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 1 466 46.255 T 28-03-2018 IPR003846 Uncharacterised protein family UPF0061 AM393_RS18815 1d57cb8c76a915b26b8c2e617ae66f5d 350 Gene3D G3DSA:3.20.20.70 8 350 9.2E-136 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM393_RS18815 1d57cb8c76a915b26b8c2e617ae66f5d 350 PIRSF PIRSF001361 1 350 1.9E-165 T 28-03-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 AM393_RS18815 1d57cb8c76a915b26b8c2e617ae66f5d 350 SUPERFAMILY SSF51569 7 348 1.15E-140 T 28-03-2018 AM393_RS18815 1d57cb8c76a915b26b8c2e617ae66f5d 350 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 6 349 7.8E-180 T 28-03-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 AM393_RS18815 1d57cb8c76a915b26b8c2e617ae66f5d 350 Pfam PF00793 DAHP synthetase I family 38 338 2.5E-111 T 28-03-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AM393_RS26305 a4610c2081d1613b947b1169d0d30798 495 Pfam PF01458 Uncharacterized protein family (UPF0051) 234 466 4.0E-69 T 28-03-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 AM393_RS26305 a4610c2081d1613b947b1169d0d30798 495 TIGRFAM TIGR01980 sufB: FeS assembly protein SufB 21 486 1.2E-193 T 28-03-2018 IPR010231 SUF system FeS cluster assembly, SufB GO:0016226 AM393_RS26305 a4610c2081d1613b947b1169d0d30798 495 SUPERFAMILY SSF101960 41 86 1.57E-137 T 28-03-2018 AM393_RS26305 a4610c2081d1613b947b1169d0d30798 495 SUPERFAMILY SSF101960 125 492 1.57E-137 T 28-03-2018 AM393_RS18750 1b61df9917a08b4a8a0dba5de1a4f3b0 264 SUPERFAMILY SSF48452 142 254 5.69E-12 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM393_RS18750 1b61df9917a08b4a8a0dba5de1a4f3b0 264 Pfam PF13432 Tetratricopeptide repeat 158 214 2.0E-5 T 28-03-2018 AM393_RS18750 1b61df9917a08b4a8a0dba5de1a4f3b0 264 Pfam PF13174 Tetratricopeptide repeat 218 250 1.1E-6 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AM393_RS18750 1b61df9917a08b4a8a0dba5de1a4f3b0 264 Pfam PF16331 TolA binding protein trimerisation 37 106 1.9E-24 T 28-03-2018 IPR032519 YbgF, trimerisation domain GO:0070206 AM393_RS18750 1b61df9917a08b4a8a0dba5de1a4f3b0 264 Gene3D G3DSA:1.25.40.10 227 263 6.0E-5 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM393_RS18750 1b61df9917a08b4a8a0dba5de1a4f3b0 264 Gene3D G3DSA:1.20.5.50 35 81 2.9E-5 T 28-03-2018 AM393_RS18750 1b61df9917a08b4a8a0dba5de1a4f3b0 264 Gene3D G3DSA:1.25.40.10 190 226 1.3E-5 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM393_RS18750 1b61df9917a08b4a8a0dba5de1a4f3b0 264 Gene3D G3DSA:1.25.40.10 138 189 0.059 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM393_RS18750 1b61df9917a08b4a8a0dba5de1a4f3b0 264 Hamap MF_02066 Cell division coordinator CpoB [cpoB]. 6 263 20.133 T 28-03-2018 IPR034706 Cell division coordinator CpoB GO:0051301 AM393_RS18750 1b61df9917a08b4a8a0dba5de1a4f3b0 264 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 145 260 1.5E-39 T 28-03-2018 IPR014162 Cell division coordinator CpoB, C-terminal AM393_RS14035 ade10fe2bf22644f30598612e74581ed 140 SUPERFAMILY SSF53062 1 129 1.7E-32 T 28-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 AM393_RS14035 ade10fe2bf22644f30598612e74581ed 140 Gene3D G3DSA:3.40.50.510 1 140 2.6E-34 T 28-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 AM393_RS14035 ade10fe2bf22644f30598612e74581ed 140 Pfam PF03610 PTS system fructose IIA component 6 114 3.1E-15 T 28-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 AM393_RS24075 ee240c0b796c22a3a8b39a0775c455ad 324 SUPERFAMILY SSF103473 2 299 7.06E-49 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS24075 ee240c0b796c22a3a8b39a0775c455ad 324 Pfam PF07690 Major Facilitator Superfamily 2 263 8.6E-28 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS24075 ee240c0b796c22a3a8b39a0775c455ad 324 Gene3D G3DSA:1.20.1250.20 1 84 9.2E-10 T 28-03-2018 AM393_RS24075 ee240c0b796c22a3a8b39a0775c455ad 324 ProSitePatterns PS00942 glpT family of transporters signature. 11 27 - T 28-03-2018 IPR021159 Glycerate/sugar phosphate transporter, conserved site GO:0005215|GO:0006810|GO:0016021 Reactome: R-HSA-70153 AM393_RS24075 ee240c0b796c22a3a8b39a0775c455ad 324 Gene3D G3DSA:1.20.1250.20 106 316 7.5E-29 T 28-03-2018 AM393_RS11025 e1796faf14e0ff4efdd371e85265ff11 518 ProSitePatterns PS00786 5'-nucleotidase signature 2. 102 113 - T 28-03-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM393_RS11025 e1796faf14e0ff4efdd371e85265ff11 518 Pfam PF02872 5'-nucleotidase, C-terminal domain 339 476 1.4E-37 T 28-03-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM393_RS11025 e1796faf14e0ff4efdd371e85265ff11 518 SUPERFAMILY SSF56300 21 326 5.13E-70 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like AM393_RS11025 e1796faf14e0ff4efdd371e85265ff11 518 Gene3D G3DSA:3.60.21.10 17 327 1.9E-72 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like AM393_RS11025 e1796faf14e0ff4efdd371e85265ff11 518 PRINTS PR01607 Apyrase family signature 450 469 4.0E-21 T 28-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM393_RS11025 e1796faf14e0ff4efdd371e85265ff11 518 PRINTS PR01607 Apyrase family signature 21 39 4.0E-21 T 28-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM393_RS11025 e1796faf14e0ff4efdd371e85265ff11 518 PRINTS PR01607 Apyrase family signature 380 403 4.0E-21 T 28-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM393_RS11025 e1796faf14e0ff4efdd371e85265ff11 518 PRINTS PR01607 Apyrase family signature 200 217 4.0E-21 T 28-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM393_RS11025 e1796faf14e0ff4efdd371e85265ff11 518 PRINTS PR01607 Apyrase family signature 235 258 4.0E-21 T 28-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM393_RS11025 e1796faf14e0ff4efdd371e85265ff11 518 Pfam PF00149 Calcineurin-like phosphoesterase 24 252 3.0E-11 T 28-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AM393_RS11025 e1796faf14e0ff4efdd371e85265ff11 518 Gene3D G3DSA:3.90.780.10 328 518 5.1E-51 T 28-03-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM393_RS11025 e1796faf14e0ff4efdd371e85265ff11 518 SUPERFAMILY SSF55816 325 514 9.68E-49 T 28-03-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM393_RS20355 cf393a46eb1f20c662b92c417c2fc0d9 426 Gene3D G3DSA:3.50.50.60 18 404 3.6E-39 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS20355 cf393a46eb1f20c662b92c417c2fc0d9 426 Pfam PF01266 FAD dependent oxidoreductase 29 381 1.0E-56 T 28-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AM393_RS20355 cf393a46eb1f20c662b92c417c2fc0d9 426 SUPERFAMILY SSF51905 28 252 2.33E-44 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS20355 cf393a46eb1f20c662b92c417c2fc0d9 426 SUPERFAMILY SSF51905 354 411 2.33E-44 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS10560 79e2b99a1933db7cd4ca03b97c34a0a5 330 TIGRFAM TIGR00669 asnA: aspartate--ammonia ligase 1 330 3.3E-193 T 28-03-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 AM393_RS10560 79e2b99a1933db7cd4ca03b97c34a0a5 330 Hamap MF_00555 Aspartate--ammonia ligase [asnA]. 1 330 46.22 T 28-03-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 AM393_RS10560 79e2b99a1933db7cd4ca03b97c34a0a5 330 SUPERFAMILY SSF55681 7 327 2.41E-98 T 28-03-2018 AM393_RS10560 79e2b99a1933db7cd4ca03b97c34a0a5 330 PIRSF PIRSF001555 1 329 3.9E-152 T 28-03-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 AM393_RS10560 79e2b99a1933db7cd4ca03b97c34a0a5 330 Gene3D G3DSA:3.30.930.10 1 329 1.1E-39 T 28-03-2018 AM393_RS10560 79e2b99a1933db7cd4ca03b97c34a0a5 330 Pfam PF03590 Aspartate-ammonia ligase 9 244 1.5E-94 T 28-03-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 AM393_RS07760 66bd851c3ffc9acf895cadbf6018fb0b 164 Pfam PF04386 Stringent starvation protein B 9 164 8.2E-44 T 28-03-2018 IPR007481 Stringent starvation protein B AM393_RS07760 66bd851c3ffc9acf895cadbf6018fb0b 164 SUPERFAMILY SSF101738 4 112 4.05E-48 T 28-03-2018 IPR007481 Stringent starvation protein B AM393_RS07760 66bd851c3ffc9acf895cadbf6018fb0b 164 Gene3D G3DSA:2.30.30.220 10 107 3.2E-41 T 28-03-2018 IPR007481 Stringent starvation protein B AM393_RS07760 66bd851c3ffc9acf895cadbf6018fb0b 164 PIRSF PIRSF005276 3 164 1.6E-59 T 28-03-2018 IPR007481 Stringent starvation protein B AM393_RS18185 fd9b157c2ae74701537ba5a3a01da002 769 SUPERFAMILY SSF50692 619 768 3.32E-43 T 28-03-2018 IPR009010 Aspartate decarboxylase-like domain AM393_RS18185 fd9b157c2ae74701537ba5a3a01da002 769 Gene3D G3DSA:3.90.55.10 474 557 3.6E-27 T 28-03-2018 AM393_RS18185 fd9b157c2ae74701537ba5a3a01da002 769 Gene3D G3DSA:3.90.55.10 4 88 1.8E-10 T 28-03-2018 AM393_RS18185 fd9b157c2ae74701537ba5a3a01da002 769 Gene3D G3DSA:3.40.228.10 158 456 6.7E-56 T 28-03-2018 AM393_RS18185 fd9b157c2ae74701537ba5a3a01da002 769 Pfam PF01568 Molydopterin dinucleotide binding domain 624 744 5.9E-26 T 28-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 AM393_RS18185 fd9b157c2ae74701537ba5a3a01da002 769 Pfam PF00384 Molybdopterin oxidoreductase 52 507 7.0E-63 T 28-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM393_RS18185 fd9b157c2ae74701537ba5a3a01da002 769 Gene3D G3DSA:2.40.40.20 575 757 7.7E-32 T 28-03-2018 AM393_RS18185 fd9b157c2ae74701537ba5a3a01da002 769 SUPERFAMILY SSF53706 11 625 5.56E-152 T 28-03-2018 AM393_RS29055 9970b3c5075f5f599b62bdef80fa4aa0 988 Pfam PF01526 Tn3 transposase DDE domain 580 966 3.0E-158 T 28-03-2018 IPR002513 Tn3 transposase DDE domain GO:0004803|GO:0006313 AM393_RS29055 9970b3c5075f5f599b62bdef80fa4aa0 988 Pfam PF13700 Domain of unknown function (DUF4158) 6 169 6.2E-54 T 28-03-2018 IPR025296 Domain of unknown function DUF4158 AM393_RS06605 a384dcd8e4ba6910cee7a9c24f9b59c8 456 Pfam PF00571 CBS domain 399 450 2.4E-4 T 28-03-2018 IPR000644 CBS domain AM393_RS06605 a384dcd8e4ba6910cee7a9c24f9b59c8 456 Pfam PF00571 CBS domain 344 388 4.8E-9 T 28-03-2018 IPR000644 CBS domain AM393_RS06605 a384dcd8e4ba6910cee7a9c24f9b59c8 456 Gene3D G3DSA:3.10.580.10 335 456 3.5E-20 T 28-03-2018 AM393_RS06605 a384dcd8e4ba6910cee7a9c24f9b59c8 456 Gene3D G3DSA:3.40.50.1100 141 322 2.3E-51 T 28-03-2018 AM393_RS06605 a384dcd8e4ba6910cee7a9c24f9b59c8 456 SMART SM00116 342 389 1.2E-6 T 28-03-2018 IPR000644 CBS domain AM393_RS06605 a384dcd8e4ba6910cee7a9c24f9b59c8 456 SUPERFAMILY SSF53686 3 320 1.14E-92 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AM393_RS06605 a384dcd8e4ba6910cee7a9c24f9b59c8 456 SUPERFAMILY SSF54631 343 452 1.17E-19 T 28-03-2018 AM393_RS06605 a384dcd8e4ba6910cee7a9c24f9b59c8 456 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 32 50 - T 28-03-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 AM393_RS06605 a384dcd8e4ba6910cee7a9c24f9b59c8 456 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 8 301 2.8E-61 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AM393_RS06605 a384dcd8e4ba6910cee7a9c24f9b59c8 456 Gene3D G3DSA:3.40.50.1100 40 140 4.5E-36 T 28-03-2018 AM393_RS13330 292d507007c4c799bbb84b434c01e7d9 501 Gene3D G3DSA:3.40.605.10 2 264 1.4E-82 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AM393_RS13330 292d507007c4c799bbb84b434c01e7d9 501 Pfam PF00171 Aldehyde dehydrogenase family 15 480 5.2E-137 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AM393_RS13330 292d507007c4c799bbb84b434c01e7d9 501 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 6 485 1.1E-192 T 28-03-2018 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00410+1.2.1.18|KEGG: 00562+1.2.1.18|KEGG: 00640+1.2.1.18+1.2.1.27|MetaCyc: PWY-5642|MetaCyc: PWY-6373|Reactome: R-HSA-70895 AM393_RS13330 292d507007c4c799bbb84b434c01e7d9 501 Gene3D G3DSA:3.40.309.10 265 463 4.3E-62 T 28-03-2018 AM393_RS13330 292d507007c4c799bbb84b434c01e7d9 501 SUPERFAMILY SSF53720 2 485 1.31E-144 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AM393_RS14555 ce3590cae4a9d76a68e18ad78140e875 1074 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 6.4E-64 T 28-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM393_RS14555 ce3590cae4a9d76a68e18ad78140e875 1074 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 6.4E-64 T 28-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM393_RS14555 ce3590cae4a9d76a68e18ad78140e875 1074 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 6.4E-64 T 28-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM393_RS14555 ce3590cae4a9d76a68e18ad78140e875 1074 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 6.4E-64 T 28-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM393_RS14555 ce3590cae4a9d76a68e18ad78140e875 1074 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 6.4E-64 T 28-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM393_RS14555 ce3590cae4a9d76a68e18ad78140e875 1074 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 6.4E-64 T 28-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM393_RS14555 ce3590cae4a9d76a68e18ad78140e875 1074 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 6.4E-64 T 28-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM393_RS14555 ce3590cae4a9d76a68e18ad78140e875 1074 SMART SM01096 424 547 8.8E-74 T 28-03-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM393_RS14555 ce3590cae4a9d76a68e18ad78140e875 1074 SUPERFAMILY SSF56059 674 934 1.38E-105 T 28-03-2018 AM393_RS14555 ce3590cae4a9d76a68e18ad78140e875 1074 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1063 13.209 T 28-03-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM393_RS14555 ce3590cae4a9d76a68e18ad78140e875 1074 Gene3D G3DSA:1.10.1030.10 404 538 9.8E-53 T 28-03-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM393_RS14555 ce3590cae4a9d76a68e18ad78140e875 1074 Pfam PF02142 MGS-like domain 957 1041 4.4E-18 T 28-03-2018 IPR011607 Methylglyoxal synthase-like domain AM393_RS14555 ce3590cae4a9d76a68e18ad78140e875 1074 SUPERFAMILY SSF56059 128 401 3.18E-110 T 28-03-2018 AM393_RS14555 ce3590cae4a9d76a68e18ad78140e875 1074 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AM393_RS14555 ce3590cae4a9d76a68e18ad78140e875 1074 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1053 0.0 T 28-03-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM393_RS14555 ce3590cae4a9d76a68e18ad78140e875 1074 SMART SM00851 956 1042 2.4E-30 T 28-03-2018 IPR011607 Methylglyoxal synthase-like domain AM393_RS14555 ce3590cae4a9d76a68e18ad78140e875 1074 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AM393_RS14555 ce3590cae4a9d76a68e18ad78140e875 1074 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1068 13.39 T 28-03-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM393_RS14555 ce3590cae4a9d76a68e18ad78140e875 1074 SUPERFAMILY SSF52335 938 1071 1.83E-35 T 28-03-2018 IPR011607 Methylglyoxal synthase-like domain AM393_RS14555 ce3590cae4a9d76a68e18ad78140e875 1074 Gene3D G3DSA:3.40.50.20 4 109 2.9E-40 T 28-03-2018 AM393_RS14555 ce3590cae4a9d76a68e18ad78140e875 1074 Gene3D G3DSA:3.40.50.20 539 655 1.1E-62 T 28-03-2018 AM393_RS14555 ce3590cae4a9d76a68e18ad78140e875 1074 SUPERFAMILY SSF52440 1 127 5.61E-50 T 28-03-2018 IPR016185 Pre-ATP-grasp domain AM393_RS14555 ce3590cae4a9d76a68e18ad78140e875 1074 Gene3D G3DSA:3.40.50.1380 928 1055 2.0E-29 T 28-03-2018 IPR011607 Methylglyoxal synthase-like domain AM393_RS14555 ce3590cae4a9d76a68e18ad78140e875 1074 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 427 547 8.6E-40 T 28-03-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM393_RS14555 ce3590cae4a9d76a68e18ad78140e875 1074 Gene3D G3DSA:3.30.470.20 746 927 5.7E-44 T 28-03-2018 AM393_RS14555 ce3590cae4a9d76a68e18ad78140e875 1074 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 839 846 - T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AM393_RS14555 ce3590cae4a9d76a68e18ad78140e875 1074 SUPERFAMILY SSF48108 396 554 8.89E-53 T 28-03-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM393_RS14555 ce3590cae4a9d76a68e18ad78140e875 1074 SUPERFAMILY SSF52440 557 676 1.44E-49 T 28-03-2018 IPR016185 Pre-ATP-grasp domain AM393_RS14555 ce3590cae4a9d76a68e18ad78140e875 1074 Gene3D G3DSA:3.30.1490.20 656 745 1.7E-23 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AM393_RS14555 ce3590cae4a9d76a68e18ad78140e875 1074 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 674 876 4.0E-39 T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AM393_RS14555 ce3590cae4a9d76a68e18ad78140e875 1074 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 3.7E-77 T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AM393_RS14555 ce3590cae4a9d76a68e18ad78140e875 1074 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 710 724 - T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AM393_RS14555 ce3590cae4a9d76a68e18ad78140e875 1074 Gene3D G3DSA:3.30.470.20 119 403 4.2E-67 T 28-03-2018 AM393_RS12600 0b85f2830af3e796d1fd36c22df71345 97 SMART SM00883 2 95 9.2E-49 T 28-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AM393_RS12600 0b85f2830af3e796d1fd36c22df71345 97 SUPERFAMILY SSF50129 1 96 4.24E-31 T 28-03-2018 IPR011032 GroES-like AM393_RS12600 0b85f2830af3e796d1fd36c22df71345 97 Gene3D G3DSA:2.30.33.40 1 96 5.3E-32 T 28-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AM393_RS12600 0b85f2830af3e796d1fd36c22df71345 97 Hamap MF_00580 10 kDa chaperonin [groS]. 2 96 23.826 T 28-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AM393_RS12600 0b85f2830af3e796d1fd36c22df71345 97 Pfam PF00166 Chaperonin 10 Kd subunit 3 95 6.5E-30 T 28-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AM393_RS12600 0b85f2830af3e796d1fd36c22df71345 97 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 28-03-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 AM393_RS12600 0b85f2830af3e796d1fd36c22df71345 97 PRINTS PR00297 10kDa chaperonin signature 25 46 1.4E-27 T 28-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AM393_RS12600 0b85f2830af3e796d1fd36c22df71345 97 PRINTS PR00297 10kDa chaperonin signature 3 18 1.4E-27 T 28-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AM393_RS12600 0b85f2830af3e796d1fd36c22df71345 97 PRINTS PR00297 10kDa chaperonin signature 60 72 1.4E-27 T 28-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AM393_RS12600 0b85f2830af3e796d1fd36c22df71345 97 PRINTS PR00297 10kDa chaperonin signature 82 95 1.4E-27 T 28-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AM393_RS23335 17f6486fb5f2def58b7ed68fd2025c35 170 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 19 166 1.4E-54 T 28-03-2018 IPR008136 CinA, C-terminal AM393_RS23335 17f6486fb5f2def58b7ed68fd2025c35 170 Gene3D G3DSA:3.90.950.20 4 170 7.4E-46 T 28-03-2018 AM393_RS23335 17f6486fb5f2def58b7ed68fd2025c35 170 SUPERFAMILY SSF142433 11 166 1.29E-45 T 28-03-2018 IPR008136 CinA, C-terminal AM393_RS23335 17f6486fb5f2def58b7ed68fd2025c35 170 Pfam PF02464 Competence-damaged protein 13 165 5.1E-51 T 28-03-2018 IPR008136 CinA, C-terminal AM393_RS11705 6a330b20e40b91de1079b178da95a650 165 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 162 26.51 T 28-03-2018 IPR022973 Ribosomal protein L10 AM393_RS11705 6a330b20e40b91de1079b178da95a650 165 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 78 161 1.0E-4 T 28-03-2018 AM393_RS11705 6a330b20e40b91de1079b178da95a650 165 ProSitePatterns PS01109 Ribosomal protein L10 signature. 8 42 - T 28-03-2018 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM393_RS11705 6a330b20e40b91de1079b178da95a650 165 SUPERFAMILY SSF160369 4 160 3.92E-47 T 28-03-2018 AM393_RS11705 6a330b20e40b91de1079b178da95a650 165 Pfam PF00466 Ribosomal protein L10 5 101 3.7E-25 T 28-03-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 AM393_RS14650 60d5d17d80fb73b0e00c4a0dd557b326 219 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 5 218 4.6E-61 T 28-03-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM393_RS14650 60d5d17d80fb73b0e00c4a0dd557b326 219 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 60 74 - T 28-03-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM393_RS14650 60d5d17d80fb73b0e00c4a0dd557b326 219 Gene3D G3DSA:3.30.2350.10 14 218 2.4E-62 T 28-03-2018 AM393_RS14650 60d5d17d80fb73b0e00c4a0dd557b326 219 SUPERFAMILY SSF55120 8 217 2.24E-64 T 28-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM393_RS14650 60d5d17d80fb73b0e00c4a0dd557b326 219 Pfam PF00849 RNA pseudouridylate synthase 22 169 3.9E-30 T 28-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM393_RS14145 019e91f32c244b8bdde0dd6b55b39ee9 79 ProDom PD058594 MEMBRANE INNER C5447 MAJOR ECS5328 THE SUPERFAMILY PERMEASES STY4905 YJJZ 1 76 6.0E-22 T 28-03-2018 IPR009885 Protein of unknown function DUF1435 AM393_RS14145 019e91f32c244b8bdde0dd6b55b39ee9 79 Pfam PF07256 Protein of unknown function (DUF1435) 1 73 1.1E-29 T 28-03-2018 IPR009885 Protein of unknown function DUF1435 AM393_RS17745 e3d81a4d093d4e63647a2feeae998ded 113 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 59 101 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM393_RS17745 e3d81a4d093d4e63647a2feeae998ded 113 SUPERFAMILY SSF46689 6 56 1.7E-11 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS17745 e3d81a4d093d4e63647a2feeae998ded 113 Gene3D G3DSA:1.10.10.60 2 59 9.4E-15 T 28-03-2018 AM393_RS17745 e3d81a4d093d4e63647a2feeae998ded 113 SMART SM00342 22 105 4.6E-35 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM393_RS17745 e3d81a4d093d4e63647a2feeae998ded 113 Pfam PF12833 Helix-turn-helix domain 28 106 2.4E-23 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM393_RS17745 e3d81a4d093d4e63647a2feeae998ded 113 SUPERFAMILY SSF46689 59 108 1.57E-13 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS17745 e3d81a4d093d4e63647a2feeae998ded 113 Gene3D G3DSA:1.10.10.60 60 113 2.9E-14 T 28-03-2018 AM393_RS17745 e3d81a4d093d4e63647a2feeae998ded 113 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 74 89 2.2E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM393_RS17745 e3d81a4d093d4e63647a2feeae998ded 113 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 89 105 2.2E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM393_RS17655 def43935ae0206afbcdf81aefa17a568 132 SUPERFAMILY SSF55811 3 129 2.17E-23 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 AM393_RS17655 def43935ae0206afbcdf81aefa17a568 132 ProSitePatterns PS00893 Nudix box signature. 34 55 - T 28-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AM393_RS17655 def43935ae0206afbcdf81aefa17a568 132 Gene3D G3DSA:3.90.79.10 3 127 9.3E-20 T 28-03-2018 AM393_RS17655 def43935ae0206afbcdf81aefa17a568 132 Pfam PF00293 NUDIX domain 7 111 2.1E-13 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AM393_RS12385 63bc398999d03818089feaa05f19717f 117 Gene3D G3DSA:1.10.287.620 14 116 9.2E-5 T 28-03-2018 AM393_RS09740 2212dae0bd9ce443dff2cfea26e39816 305 Pfam PF00005 ABC transporter 22 163 7.3E-33 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS09740 2212dae0bd9ce443dff2cfea26e39816 305 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS09740 2212dae0bd9ce443dff2cfea26e39816 305 SMART SM00382 30 209 3.6E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS09740 2212dae0bd9ce443dff2cfea26e39816 305 SUPERFAMILY SSF52540 5 226 5.77E-63 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS09740 2212dae0bd9ce443dff2cfea26e39816 305 Gene3D G3DSA:3.40.50.300 2 234 2.8E-64 T 28-03-2018 AM393_RS13100 3767da5a8917c6a581320e2476974b3c 128 Pfam PF07361 Cytochrome b562 24 128 2.6E-32 T 28-03-2018 IPR009155 Cytochrome b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900|GO:0042597 AM393_RS13100 3767da5a8917c6a581320e2476974b3c 128 SUPERFAMILY SSF47175 23 128 1.88E-31 T 28-03-2018 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 AM393_RS13100 3767da5a8917c6a581320e2476974b3c 128 Gene3D G3DSA:1.20.120.10 24 128 5.1E-19 T 28-03-2018 AM393_RS13100 3767da5a8917c6a581320e2476974b3c 128 PIRSF PIRSF000029 1 128 2.9E-54 T 28-03-2018 IPR009155 Cytochrome b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900|GO:0042597 AM393_RS08670 8e11ac86d088a1461ffe41f34ab6fffe 191 Gene3D G3DSA:2.60.300.12 1 102 1.7E-16 T 28-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 AM393_RS08670 8e11ac86d088a1461ffe41f34ab6fffe 191 Hamap MF_01637 Fe/S biogenesis protein NfuA [nfuA]. 1 191 46.473 T 28-03-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 AM393_RS08670 8e11ac86d088a1461ffe41f34ab6fffe 191 Pfam PF01106 NifU-like domain 111 177 2.7E-20 T 28-03-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 AM393_RS08670 8e11ac86d088a1461ffe41f34ab6fffe 191 Pfam PF01521 Iron-sulphur cluster biosynthesis 2 98 8.0E-13 T 28-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 AM393_RS08670 8e11ac86d088a1461ffe41f34ab6fffe 191 SUPERFAMILY SSF89360 1 97 3.14E-21 T 28-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 AM393_RS08670 8e11ac86d088a1461ffe41f34ab6fffe 191 TIGRFAM TIGR03341 YhgI_GntY: IscR-regulated protein YhgI 2 191 5.8E-101 T 28-03-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 AM393_RS08670 8e11ac86d088a1461ffe41f34ab6fffe 191 Gene3D G3DSA:3.30.300.130 103 187 6.9E-26 T 28-03-2018 IPR034904 Fe-S cluster assembly domain AM393_RS08670 8e11ac86d088a1461ffe41f34ab6fffe 191 SUPERFAMILY SSF117916 95 184 5.45E-25 T 28-03-2018 IPR034904 Fe-S cluster assembly domain AM393_RS08670 8e11ac86d088a1461ffe41f34ab6fffe 191 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 119 177 5.0E-27 T 28-03-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 AM393_RS19835 08972123f37d70d646202d58f5e814a4 371 SUPERFAMILY SSF111369 52 299 3.01E-28 T 28-03-2018 AM393_RS19835 08972123f37d70d646202d58f5e814a4 371 Gene3D G3DSA:1.20.1600.10 30 305 5.6E-35 T 28-03-2018 AM393_RS19835 08972123f37d70d646202d58f5e814a4 371 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 39 362 7.4E-57 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AM393_RS19835 08972123f37d70d646202d58f5e814a4 371 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 49 294 3.4E-18 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AM393_RS11055 f7fe06d5973c400d6f43cd4179dae66d 220 ProSitePatterns PS01054 Transaldolase signature 1. 24 32 - T 28-03-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 AM393_RS11055 f7fe06d5973c400d6f43cd4179dae66d 220 Hamap MF_00496 Fructose-6-phosphate aldolase [fsa]. 1 220 50.174 T 28-03-2018 IPR023001 Fructose-6-phosphate aldolase GO:0016832 AM393_RS11055 f7fe06d5973c400d6f43cd4179dae66d 220 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 3 206 3.9E-46 T 28-03-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 AM393_RS11055 f7fe06d5973c400d6f43cd4179dae66d 220 Gene3D G3DSA:3.20.20.70 1 220 1.2E-59 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM393_RS11055 f7fe06d5973c400d6f43cd4179dae66d 220 ProSitePatterns PS00958 Transaldolase active site. 82 99 - T 28-03-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 AM393_RS11055 f7fe06d5973c400d6f43cd4179dae66d 220 SUPERFAMILY SSF51569 1 218 3.24E-66 T 28-03-2018 AM393_RS11055 f7fe06d5973c400d6f43cd4179dae66d 220 TIGRFAM TIGR00875 fsa_talC_mipB: fructose-6-phosphate aldolase 1 215 7.2E-100 T 28-03-2018 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 AM393_RS00785 fc6f19109e9574e48f337079c88c83fe 504 Gene3D G3DSA:3.40.50.300 271 495 1.8E-35 T 28-03-2018 AM393_RS00785 fc6f19109e9574e48f337079c88c83fe 504 Gene3D G3DSA:3.40.50.300 4 228 7.6E-53 T 28-03-2018 AM393_RS00785 fc6f19109e9574e48f337079c88c83fe 504 ProSitePatterns PS00211 ABC transporters family signature. 400 414 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS00785 fc6f19109e9574e48f337079c88c83fe 504 SUPERFAMILY SSF52540 274 487 2.66E-44 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS00785 fc6f19109e9574e48f337079c88c83fe 504 Pfam PF00005 ABC transporter 274 427 1.1E-18 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS00785 fc6f19109e9574e48f337079c88c83fe 504 Pfam PF00005 ABC transporter 23 172 9.4E-33 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS00785 fc6f19109e9574e48f337079c88c83fe 504 SUPERFAMILY SSF52540 6 225 1.23E-58 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS00785 fc6f19109e9574e48f337079c88c83fe 504 SMART SM00382 32 220 1.7E-10 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS00785 fc6f19109e9574e48f337079c88c83fe 504 SMART SM00382 281 476 1.7E-6 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS01485 4630a82229f9d7569139137c879cdaaf 489 PIRSF PIRSF006603 31 489 1.4E-74 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AM393_RS01485 4630a82229f9d7569139137c879cdaaf 489 TIGRFAM TIGR00797 matE: MATE efflux family protein 48 452 1.7E-70 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AM393_RS01485 4630a82229f9d7569139137c879cdaaf 489 Pfam PF01554 MatE 48 208 3.3E-35 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AM393_RS01485 4630a82229f9d7569139137c879cdaaf 489 Pfam PF01554 MatE 278 439 1.8E-23 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AM393_RS17345 ee2c0b4371032ad678d3c49b3afa38f6 306 PIRSF PIRSF026649 2 306 6.2E-99 T 28-03-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 AM393_RS17345 ee2c0b4371032ad678d3c49b3afa38f6 306 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 4 306 49.27 T 28-03-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24 AM393_RS17345 ee2c0b4371032ad678d3c49b3afa38f6 306 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 5 297 5.0E-105 T 28-03-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 AM393_RS17345 ee2c0b4371032ad678d3c49b3afa38f6 306 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 5 305 6.2E-139 T 28-03-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24 AM393_RS00500 ca309585df12114123b73ca9aabbd4f3 225 Hamap MF_00749 RNA chaperone ProQ [proQ]. 3 224 30.048 T 28-03-2018 IPR023529 RNA chaperone ProQ GO:0003723|GO:0010608|GO:0033592|GO:0034057 AM393_RS00500 ca309585df12114123b73ca9aabbd4f3 225 Gene3D G3DSA:1.10.1710.10 1 121 7.5E-41 T 28-03-2018 IPR016103 ProQ/FinO domain AM393_RS00500 ca309585df12114123b73ca9aabbd4f3 225 Pfam PF04352 ProQ/FINO family 8 115 2.8E-42 T 28-03-2018 IPR016103 ProQ/FinO domain AM393_RS00500 ca309585df12114123b73ca9aabbd4f3 225 SMART SM00945 5 119 1.1E-59 T 28-03-2018 IPR016103 ProQ/FinO domain AM393_RS00500 ca309585df12114123b73ca9aabbd4f3 225 SUPERFAMILY SSF48657 5 119 8.11E-40 T 28-03-2018 IPR016103 ProQ/FinO domain AM393_RS00500 ca309585df12114123b73ca9aabbd4f3 225 Pfam PF17516 ProQ C-terminal domain 176 225 7.8E-24 T 28-03-2018 IPR035236 RNA chaperone ProQ, C-terminal AM393_RS11415 12f068ad3a1851013fedaf21eefbfdfc 235 Pfam PF04340 Protein of unknown function, DUF484 12 232 4.6E-79 T 28-03-2018 IPR007435 Protein of unknown function DUF484 AM393_RS11415 12f068ad3a1851013fedaf21eefbfdfc 235 Gene3D G3DSA:3.30.450.40 49 231 5.5E-6 T 28-03-2018 IPR029016 GAF domain-like AM393_RS21550 21aa747993dea2b1e8fe2011d64c798f 179 Pfam PF04279 Intracellular septation protein A 1 175 2.2E-72 T 28-03-2018 IPR006008 Intracellular septation protein A GO:0016021 AM393_RS21550 21aa747993dea2b1e8fe2011d64c798f 179 TIGRFAM TIGR00997 ispZ: intracellular septation protein A 1 177 9.8E-75 T 28-03-2018 IPR006008 Intracellular septation protein A GO:0016021 AM393_RS21550 21aa747993dea2b1e8fe2011d64c798f 179 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 1 176 19.41 T 28-03-2018 IPR006008 Intracellular septation protein A GO:0016021 AM393_RS20365 2ae2643eda767867a3d4ee6f92b6d241 185 SUPERFAMILY SSF51182 51 183 5.09E-30 T 28-03-2018 IPR011051 RmlC-like cupin domain AM393_RS20365 2ae2643eda767867a3d4ee6f92b6d241 185 SUPERFAMILY SSF47413 7 73 2.06E-16 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM393_RS20365 2ae2643eda767867a3d4ee6f92b6d241 185 Pfam PF07883 Cupin domain 111 178 1.1E-16 T 28-03-2018 IPR013096 Cupin 2, conserved barrel AM393_RS20365 2ae2643eda767867a3d4ee6f92b6d241 185 Gene3D G3DSA:2.60.120.10 77 184 1.1E-18 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AM393_RS20365 2ae2643eda767867a3d4ee6f92b6d241 185 Gene3D G3DSA:1.10.260.40 4 76 3.9E-17 T 28-03-2018 AM393_RS20365 2ae2643eda767867a3d4ee6f92b6d241 185 Pfam PF01381 Helix-turn-helix 13 66 2.9E-14 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM393_RS20365 2ae2643eda767867a3d4ee6f92b6d241 185 SMART SM00530 11 66 1.2E-14 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM393_RS09665 00598880e63bb46fa0714f2502909330 364 Pfam PF13439 Glycosyltransferase Family 4 13 182 3.6E-14 T 28-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 AM393_RS09665 00598880e63bb46fa0714f2502909330 364 Gene3D G3DSA:3.40.50.2000 1 188 2.9E-10 T 28-03-2018 AM393_RS09665 00598880e63bb46fa0714f2502909330 364 Gene3D G3DSA:3.40.50.2000 189 347 1.5E-27 T 28-03-2018 AM393_RS09665 00598880e63bb46fa0714f2502909330 364 Pfam PF00534 Glycosyl transferases group 1 196 337 1.3E-19 T 28-03-2018 IPR001296 Glycosyl transferase, family 1 AM393_RS09665 00598880e63bb46fa0714f2502909330 364 SUPERFAMILY SSF53756 2 361 1.14E-53 T 28-03-2018 AM393_RS18395 675c9ef6890cb0ea02290921f980adb3 512 Gene3D G3DSA:3.60.110.10 219 481 6.2E-35 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AM393_RS18395 675c9ef6890cb0ea02290921f980adb3 512 SUPERFAMILY SSF56317 216 490 6.54E-36 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AM393_RS18395 675c9ef6890cb0ea02290921f980adb3 512 Pfam PF00795 Carbon-nitrogen hydrolase 224 477 1.4E-39 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AM393_RS18395 675c9ef6890cb0ea02290921f980adb3 512 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 10 495 24.121 T 28-03-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 AM393_RS18395 675c9ef6890cb0ea02290921f980adb3 512 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 63 458 5.3E-116 T 28-03-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 AM393_RS04625 e28b3e27365a06889ebf8b73134911cf 445 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 37 440 6.0E-21 T 28-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 AM393_RS04625 e28b3e27365a06889ebf8b73134911cf 445 Gene3D G3DSA:2.40.170.10 28 445 2.1E-92 T 28-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 AM393_RS04625 e28b3e27365a06889ebf8b73134911cf 445 SUPERFAMILY SSF56935 30 445 2.23E-92 T 28-03-2018 AM393_RS04625 e28b3e27365a06889ebf8b73134911cf 445 Pfam PF02264 LamB porin 33 445 1.7E-88 T 28-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 AM393_RS16940 cc0199ac2bc90eb266b95e820e9fc385 71 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 33 64 4.1E-10 T 28-03-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 AM393_RS16940 cc0199ac2bc90eb266b95e820e9fc385 71 SUPERFAMILY SSF57716 34 69 8.55E-6 T 28-03-2018 AM393_RS16940 cc0199ac2bc90eb266b95e820e9fc385 71 TIGRFAM TIGR02419 C4_traR_proteo: phage/conjugal plasmid C-4 type zinc finger protein, TraR family 4 64 2.9E-18 T 28-03-2018 IPR012783 Zinc finger, C4 DksA/TraR-type AM393_RS06830 0a8918e8568b546170074d103c4943f1 90 Pfam PF04380 Membrane fusogenic activity 1 77 1.2E-28 T 28-03-2018 IPR007475 Membrane fusogenic activity AM393_RS07445 d012fba4a9908004b3e7570f9742ba31 414 Pfam PF03222 Tryptophan/tyrosine permease family 10 402 2.8E-149 T 28-03-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 AM393_RS07445 d012fba4a9908004b3e7570f9742ba31 414 PRINTS PR00166 Aromatic amino acid permease signature 155 175 5.2E-103 T 28-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AM393_RS07445 d012fba4a9908004b3e7570f9742ba31 414 PRINTS PR00166 Aromatic amino acid permease signature 45 64 5.2E-103 T 28-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AM393_RS07445 d012fba4a9908004b3e7570f9742ba31 414 PRINTS PR00166 Aromatic amino acid permease signature 232 251 5.2E-103 T 28-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AM393_RS07445 d012fba4a9908004b3e7570f9742ba31 414 PRINTS PR00166 Aromatic amino acid permease signature 293 312 5.2E-103 T 28-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AM393_RS07445 d012fba4a9908004b3e7570f9742ba31 414 PRINTS PR00166 Aromatic amino acid permease signature 348 367 5.2E-103 T 28-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AM393_RS07445 d012fba4a9908004b3e7570f9742ba31 414 PRINTS PR00166 Aromatic amino acid permease signature 18 41 5.2E-103 T 28-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AM393_RS07445 d012fba4a9908004b3e7570f9742ba31 414 PRINTS PR00166 Aromatic amino acid permease signature 90 110 5.2E-103 T 28-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AM393_RS07445 d012fba4a9908004b3e7570f9742ba31 414 PRINTS PR00166 Aromatic amino acid permease signature 193 215 5.2E-103 T 28-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AM393_RS07445 d012fba4a9908004b3e7570f9742ba31 414 PRINTS PR00166 Aromatic amino acid permease signature 327 345 5.2E-103 T 28-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AM393_RS07445 d012fba4a9908004b3e7570f9742ba31 414 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 15 395 6.6E-157 T 28-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AM393_RS07445 d012fba4a9908004b3e7570f9742ba31 414 ProSitePatterns PS00594 Aromatic amino acids permeases signature. 25 41 - T 28-03-2018 IPR013061 Tryptophan/tryrosine permease, conserved site AM393_RS23560 58e0f46f749e447d9ee5c84d384e6c59 314 SUPERFAMILY SSF56327 147 311 1.44E-45 T 28-03-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 AM393_RS23560 58e0f46f749e447d9ee5c84d384e6c59 314 ProSitePatterns PS00064 L-lactate dehydrogenase active site. 176 182 - T 28-03-2018 IPR018177 L-lactate dehydrogenase, active site GO:0004459|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|Reactome: R-HSA-70268 AM393_RS23560 58e0f46f749e447d9ee5c84d384e6c59 314 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 151 311 9.6E-20 T 28-03-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 AM393_RS23560 58e0f46f749e447d9ee5c84d384e6c59 314 Gene3D G3DSA:3.40.50.720 6 146 2.3E-29 T 28-03-2018 AM393_RS23560 58e0f46f749e447d9ee5c84d384e6c59 314 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 7 146 1.6E-32 T 28-03-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 AM393_RS23560 58e0f46f749e447d9ee5c84d384e6c59 314 Gene3D G3DSA:3.90.110.10 147 313 6.9E-43 T 28-03-2018 AM393_RS23560 58e0f46f749e447d9ee5c84d384e6c59 314 TIGRFAM TIGR01771 L-LDH-NAD: L-lactate dehydrogenase 10 307 1.9E-106 T 28-03-2018 IPR011304 L-lactate dehydrogenase GO:0004459|GO:0005737|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|Reactome: R-HSA-70268 AM393_RS23560 58e0f46f749e447d9ee5c84d384e6c59 314 SUPERFAMILY SSF51735 3 146 2.57E-43 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS23560 58e0f46f749e447d9ee5c84d384e6c59 314 PIRSF PIRSF000102 2 313 9.6E-94 T 28-03-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 AM393_RS23560 58e0f46f749e447d9ee5c84d384e6c59 314 Hamap MF_00488 L-lactate dehydrogenase [ldh]. 5 314 38.207 T 28-03-2018 IPR011304 L-lactate dehydrogenase GO:0004459|GO:0005737|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|Reactome: R-HSA-70268 AM393_RS23560 58e0f46f749e447d9ee5c84d384e6c59 314 PRINTS PR00086 L-lactate dehydrogenase signature 144 162 5.6E-38 T 28-03-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 AM393_RS23560 58e0f46f749e447d9ee5c84d384e6c59 314 PRINTS PR00086 L-lactate dehydrogenase signature 174 187 5.6E-38 T 28-03-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 AM393_RS23560 58e0f46f749e447d9ee5c84d384e6c59 314 PRINTS PR00086 L-lactate dehydrogenase signature 120 140 5.6E-38 T 28-03-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 AM393_RS23560 58e0f46f749e447d9ee5c84d384e6c59 314 PRINTS PR00086 L-lactate dehydrogenase signature 32 56 5.6E-38 T 28-03-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 AM393_RS23560 58e0f46f749e447d9ee5c84d384e6c59 314 PRINTS PR00086 L-lactate dehydrogenase signature 7 31 5.6E-38 T 28-03-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 AM393_RS16295 65b12147a07bed43e452c010934ac52d 149 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 147 7.2E-77 T 28-03-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 AM393_RS16295 65b12147a07bed43e452c010934ac52d 149 Pfam PF03477 ATP cone domain 50 136 1.2E-14 T 28-03-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 AM393_RS16295 65b12147a07bed43e452c010934ac52d 149 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 149 87.415 T 28-03-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 AM393_RS28255 f2f19a2ef66ccb29b4c5e538d8319a6c 529 Pfam PF13007 Transposase C of IS166 homeodomain 53 123 2.8E-11 T 28-03-2018 IPR024463 Transposase TnpC, homeodomain AM393_RS28255 f2f19a2ef66ccb29b4c5e538d8319a6c 529 Pfam PF13817 IS66 C-terminal element 487 523 1.0E-14 T 28-03-2018 AM393_RS28255 f2f19a2ef66ccb29b4c5e538d8319a6c 529 Pfam PF03050 Transposase IS66 family 190 479 6.7E-97 T 28-03-2018 IPR004291 Transposase, IS66 AM393_RS28255 f2f19a2ef66ccb29b4c5e538d8319a6c 529 Gene3D G3DSA:1.20.1170.10 1 421 5.8E-8 T 28-03-2018 AM393_RS28255 f2f19a2ef66ccb29b4c5e538d8319a6c 529 Pfam PF13005 zinc-finger binding domain of transposase IS66 131 175 1.3E-10 T 28-03-2018 IPR024474 Zinc-finger binding domain of transposase IS66 AM393_RS24815 81c438ce554bfdd3c633a7ba1eefcc72 538 Pfam PF00005 ABC transporter 24 182 1.9E-29 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS24815 81c438ce554bfdd3c633a7ba1eefcc72 538 Pfam PF00005 ABC transporter 296 448 8.2E-31 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS24815 81c438ce554bfdd3c633a7ba1eefcc72 538 ProSitePatterns PS00211 ABC transporters family signature. 420 434 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS24815 81c438ce554bfdd3c633a7ba1eefcc72 538 SUPERFAMILY SSF52540 277 519 1.78E-69 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS24815 81c438ce554bfdd3c633a7ba1eefcc72 538 SMART SM00382 32 231 5.1E-23 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS24815 81c438ce554bfdd3c633a7ba1eefcc72 538 SMART SM00382 305 505 5.6E-16 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS24815 81c438ce554bfdd3c633a7ba1eefcc72 538 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 234 255 0.0025 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AM393_RS24815 81c438ce554bfdd3c633a7ba1eefcc72 538 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 499 531 0.002 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AM393_RS24815 81c438ce554bfdd3c633a7ba1eefcc72 538 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS24815 81c438ce554bfdd3c633a7ba1eefcc72 538 Gene3D G3DSA:3.40.50.300 273 538 2.3E-72 T 28-03-2018 AM393_RS24815 81c438ce554bfdd3c633a7ba1eefcc72 538 Gene3D G3DSA:3.40.50.300 1 260 5.9E-72 T 28-03-2018 AM393_RS24815 81c438ce554bfdd3c633a7ba1eefcc72 538 SUPERFAMILY SSF52540 3 253 6.59E-65 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS07390 edab1a5dd684745ff9ff88f611002bae 191 SMART SM00749 51 114 8.4E-12 T 28-03-2018 IPR014004 Transport-associated and nodulation domain, bacteria AM393_RS07390 edab1a5dd684745ff9ff88f611002bae 191 SMART SM00749 129 191 6.5E-6 T 28-03-2018 IPR014004 Transport-associated and nodulation domain, bacteria AM393_RS07390 edab1a5dd684745ff9ff88f611002bae 191 Pfam PF04972 BON domain 46 113 1.5E-13 T 28-03-2018 IPR007055 BON domain AM393_RS07390 edab1a5dd684745ff9ff88f611002bae 191 Pfam PF04972 BON domain 124 189 3.9E-15 T 28-03-2018 IPR007055 BON domain AM393_RS13890 4d4d8290d7b94d670450f982aa0861b6 296 Gene3D G3DSA:2.60.120.280 13 177 8.0E-17 T 28-03-2018 AM393_RS13890 4d4d8290d7b94d670450f982aa0861b6 296 SMART SM00342 206 289 1.8E-27 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM393_RS13890 4d4d8290d7b94d670450f982aa0861b6 296 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 243 285 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM393_RS13890 4d4d8290d7b94d670450f982aa0861b6 296 TIGRFAM TIGR02297 HpaA: 4-hydroxyphenylacetate catabolism regulatory protein HpaA 6 291 1.1E-120 T 28-03-2018 IPR011983 4-hydroxyphenylacetate catabolism regulatory protein HpaA AM393_RS13890 4d4d8290d7b94d670450f982aa0861b6 296 SUPERFAMILY SSF51182 40 123 2.22E-11 T 28-03-2018 IPR011051 RmlC-like cupin domain AM393_RS13890 4d4d8290d7b94d670450f982aa0861b6 296 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 273 289 1.8E-6 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM393_RS13890 4d4d8290d7b94d670450f982aa0861b6 296 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 258 273 1.8E-6 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM393_RS13890 4d4d8290d7b94d670450f982aa0861b6 296 Pfam PF07883 Cupin domain 38 99 2.9E-8 T 28-03-2018 IPR013096 Cupin 2, conserved barrel AM393_RS13890 4d4d8290d7b94d670450f982aa0861b6 296 SUPERFAMILY SSF46689 244 291 5.82E-12 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS13890 4d4d8290d7b94d670450f982aa0861b6 296 Gene3D G3DSA:1.10.10.60 188 244 5.0E-8 T 28-03-2018 AM393_RS13890 4d4d8290d7b94d670450f982aa0861b6 296 Pfam PF12833 Helix-turn-helix domain 212 290 1.3E-19 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM393_RS13890 4d4d8290d7b94d670450f982aa0861b6 296 Gene3D G3DSA:1.10.10.60 245 292 3.1E-14 T 28-03-2018 AM393_RS02875 9717ce8502cef38430684f73eb158e0b 406 SMART SM00825 Beta-ketoacyl synthase 4 406 3.8E-13 T 28-03-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AM393_RS02875 9717ce8502cef38430684f73eb158e0b 406 Gene3D G3DSA:3.40.47.10 4 259 4.8E-53 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM393_RS02875 9717ce8502cef38430684f73eb158e0b 406 Gene3D G3DSA:3.40.47.10 260 404 2.2E-40 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM393_RS02875 9717ce8502cef38430684f73eb158e0b 406 SUPERFAMILY SSF53901 1 253 4.32E-64 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM393_RS02875 9717ce8502cef38430684f73eb158e0b 406 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 2 246 1.8E-39 T 28-03-2018 IPR014030 Beta-ketoacyl synthase, N-terminal AM393_RS02875 9717ce8502cef38430684f73eb158e0b 406 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 154 170 - T 28-03-2018 IPR018201 Beta-ketoacyl synthase, active site AM393_RS02875 9717ce8502cef38430684f73eb158e0b 406 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 254 361 2.5E-29 T 28-03-2018 IPR014031 Beta-ketoacyl synthase, C-terminal AM393_RS02875 9717ce8502cef38430684f73eb158e0b 406 SUPERFAMILY SSF53901 215 404 2.3E-61 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM393_RS02625 8bd527fcdb31b4dbc33cf5fea6992f96 429 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 92 426 1.1E-103 T 28-03-2018 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 AM393_RS02625 8bd527fcdb31b4dbc33cf5fea6992f96 429 Pfam PF00425 chorismate binding enzyme 169 419 3.7E-64 T 28-03-2018 IPR015890 Chorismate-utilising enzyme, C-terminal AM393_RS02625 8bd527fcdb31b4dbc33cf5fea6992f96 429 Gene3D G3DSA:3.60.120.10 1 428 3.7E-90 T 28-03-2018 IPR005801 ADC synthase GO:0009058 AM393_RS02625 8bd527fcdb31b4dbc33cf5fea6992f96 429 Hamap MF_01935 Isochorismate synthase MenF [menF]. 3 429 30.466 T 28-03-2018 IPR034681 Isochorismate synthase MenF GO:0008909|GO:0009234 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 AM393_RS02625 8bd527fcdb31b4dbc33cf5fea6992f96 429 SUPERFAMILY SSF56322 24 427 5.76E-97 T 28-03-2018 IPR005801 ADC synthase GO:0009058 AM393_RS05035 f17f82e3601dbb545bb4c3b561efd3a1 647 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 97 112 - T 28-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AM393_RS05035 f17f82e3601dbb545bb4c3b561efd3a1 647 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 224 233 - T 28-03-2018 IPR025944 Sigma-54 interaction domain, conserved site AM393_RS05035 f17f82e3601dbb545bb4c3b561efd3a1 647 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 35 48 - T 28-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AM393_RS05035 f17f82e3601dbb545bb4c3b561efd3a1 647 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 291 308 3.3E-7 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM393_RS05035 f17f82e3601dbb545bb4c3b561efd3a1 647 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 308 328 3.3E-7 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM393_RS05035 f17f82e3601dbb545bb4c3b561efd3a1 647 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 351 631 2.3E-55 T 28-03-2018 IPR010067 Aliphatic sulfonates-binding protein GO:0016020|GO:0042626 AM393_RS05035 f17f82e3601dbb545bb4c3b561efd3a1 647 Gene3D G3DSA:3.40.190.10 453 631 7.9E-26 T 28-03-2018 AM393_RS05035 f17f82e3601dbb545bb4c3b561efd3a1 647 SUPERFAMILY SSF46689 224 327 2.91E-12 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS05035 f17f82e3601dbb545bb4c3b561efd3a1 647 SUPERFAMILY SSF53850 349 583 4.3E-37 T 28-03-2018 AM393_RS05035 f17f82e3601dbb545bb4c3b561efd3a1 647 Gene3D G3DSA:1.10.10.60 243 315 2.7E-11 T 28-03-2018 AM393_RS05035 f17f82e3601dbb545bb4c3b561efd3a1 647 Gene3D G3DSA:1.10.10.10 316 351 0.0015 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS05035 f17f82e3601dbb545bb4c3b561efd3a1 647 Pfam PF00158 Sigma-54 interaction domain 18 175 1.2E-66 T 28-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AM393_RS05035 f17f82e3601dbb545bb4c3b561efd3a1 647 Pfam PF09084 NMT1/THI5 like 376 554 4.7E-7 T 28-03-2018 IPR015168 SsuA/THI5-like AM393_RS05035 f17f82e3601dbb545bb4c3b561efd3a1 647 Gene3D G3DSA:1.10.8.60 184 242 4.1E-25 T 28-03-2018 AM393_RS05035 f17f82e3601dbb545bb4c3b561efd3a1 647 SMART SM00062 350 581 3.0E-4 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM393_RS05035 f17f82e3601dbb545bb4c3b561efd3a1 647 Pfam PF02954 Bacterial regulatory protein, Fis family 291 319 8.6E-9 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM393_RS05035 f17f82e3601dbb545bb4c3b561efd3a1 647 Gene3D G3DSA:3.40.50.300 13 183 3.0E-25 T 28-03-2018 AM393_RS05035 f17f82e3601dbb545bb4c3b561efd3a1 647 SUPERFAMILY SSF52540 15 253 1.44E-71 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS05035 f17f82e3601dbb545bb4c3b561efd3a1 647 SMART SM00382 31 175 6.1E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS05035 f17f82e3601dbb545bb4c3b561efd3a1 647 Gene3D G3DSA:3.40.190.10 352 452 3.7E-8 T 28-03-2018 AM393_RS28925 ff3faa52106affc270539f5fee296765 746 Pfam PF01526 Tn3 transposase DDE domain 515 739 5.0E-78 T 28-03-2018 IPR002513 Tn3 transposase DDE domain GO:0004803|GO:0006313 AM393_RS28925 ff3faa52106affc270539f5fee296765 746 Pfam PF13700 Domain of unknown function (DUF4158) 1 101 1.4E-25 T 28-03-2018 IPR025296 Domain of unknown function DUF4158 AM393_RS15285 7b620b70dfac0e3a0deec4de880c553c 477 Gene3D G3DSA:2.30.42.10 392 477 8.3E-17 T 28-03-2018 AM393_RS15285 7b620b70dfac0e3a0deec4de880c553c 477 SUPERFAMILY SSF50156 274 383 1.17E-23 T 28-03-2018 IPR001478 PDZ domain GO:0005515 AM393_RS15285 7b620b70dfac0e3a0deec4de880c553c 477 SMART SM00228 399 469 5.2E-10 T 28-03-2018 IPR001478 PDZ domain GO:0005515 AM393_RS15285 7b620b70dfac0e3a0deec4de880c553c 477 SMART SM00228 292 374 2.9E-15 T 28-03-2018 IPR001478 PDZ domain GO:0005515 AM393_RS15285 7b620b70dfac0e3a0deec4de880c553c 477 Gene3D G3DSA:2.30.42.10 287 391 9.4E-28 T 28-03-2018 AM393_RS15285 7b620b70dfac0e3a0deec4de880c553c 477 SUPERFAMILY SSF50156 402 473 2.37E-16 T 28-03-2018 IPR001478 PDZ domain GO:0005515 AM393_RS15285 7b620b70dfac0e3a0deec4de880c553c 477 Gene3D G3DSA:2.40.10.10 164 282 7.4E-44 T 28-03-2018 AM393_RS15285 7b620b70dfac0e3a0deec4de880c553c 477 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 394 466 6.6E-12 T 28-03-2018 IPR001478 PDZ domain GO:0005515 AM393_RS15285 7b620b70dfac0e3a0deec4de880c553c 477 Pfam PF13180 PDZ domain 294 383 1.2E-16 T 28-03-2018 IPR001478 PDZ domain GO:0005515 AM393_RS15285 7b620b70dfac0e3a0deec4de880c553c 477 SUPERFAMILY SSF50494 36 60 9.17E-66 T 28-03-2018 IPR009003 Peptidase S1, PA clan AM393_RS15285 7b620b70dfac0e3a0deec4de880c553c 477 SUPERFAMILY SSF50494 114 301 9.17E-66 T 28-03-2018 IPR009003 Peptidase S1, PA clan AM393_RS15285 7b620b70dfac0e3a0deec4de880c553c 477 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 41 475 1.9E-167 T 28-03-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 AM393_RS15285 7b620b70dfac0e3a0deec4de880c553c 477 PRINTS PR00834 HtrA/DegQ protease family signature 332 344 4.0E-60 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AM393_RS15285 7b620b70dfac0e3a0deec4de880c553c 477 PRINTS PR00834 HtrA/DegQ protease family signature 127 139 4.0E-60 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AM393_RS15285 7b620b70dfac0e3a0deec4de880c553c 477 PRINTS PR00834 HtrA/DegQ protease family signature 189 213 4.0E-60 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AM393_RS15285 7b620b70dfac0e3a0deec4de880c553c 477 PRINTS PR00834 HtrA/DegQ protease family signature 148 168 4.0E-60 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AM393_RS15285 7b620b70dfac0e3a0deec4de880c553c 477 PRINTS PR00834 HtrA/DegQ protease family signature 246 263 4.0E-60 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AM393_RS15285 7b620b70dfac0e3a0deec4de880c553c 477 PRINTS PR00834 HtrA/DegQ protease family signature 224 241 4.0E-60 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AM393_RS15285 7b620b70dfac0e3a0deec4de880c553c 477 Pfam PF13365 Trypsin-like peptidase domain 117 253 4.0E-33 T 28-03-2018 AM393_RS15285 7b620b70dfac0e3a0deec4de880c553c 477 Gene3D G3DSA:2.40.10.10 28 163 8.9E-33 T 28-03-2018 AM393_RS15950 3374cb8e5d93422928b015bc9456e03f 229 Gene3D G3DSA:1.10.3720.10 6 229 1.1E-34 T 28-03-2018 AM393_RS15950 3374cb8e5d93422928b015bc9456e03f 229 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 43 226 2.2E-16 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS15950 3374cb8e5d93422928b015bc9456e03f 229 SUPERFAMILY SSF161098 27 211 1.83E-36 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS15950 3374cb8e5d93422928b015bc9456e03f 229 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 27 115 1.4E-12 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AM393_RS15985 3137bf5f2dbb7ac60c17a2f3dea59a06 349 Pfam PF02653 Branched-chain amino acid transport system / permease component 35 323 5.1E-36 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AM393_RS15985 3137bf5f2dbb7ac60c17a2f3dea59a06 349 Gene3D G3DSA:1.10.3470.10 25 329 2.3E-33 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AM393_RS26495 80a79c10284d8555e52f67042ccdb7b0 117 SUPERFAMILY SSF55298 10 116 1.48E-29 T 28-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AM393_RS26495 80a79c10284d8555e52f67042ccdb7b0 117 Gene3D G3DSA:3.30.1330.40 2 117 4.5E-26 T 28-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AM393_RS26495 80a79c10284d8555e52f67042ccdb7b0 117 Pfam PF01042 Endoribonuclease L-PSP 14 115 8.1E-23 T 28-03-2018 IPR006175 YjgF/YER057c/UK114 family AM393_RS08250 44d2327b2290519916da0546a26af09e 177 PIRSF PIRSF002162 1 177 3.6E-43 T 28-03-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM393_RS08250 44d2327b2290519916da0546a26af09e 177 Gene3D G3DSA:3.90.930.12 5 85 7.5E-25 T 28-03-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM393_RS08250 44d2327b2290519916da0546a26af09e 177 SUPERFAMILY SSF56053 1 82 2.64E-23 T 28-03-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM393_RS08250 44d2327b2290519916da0546a26af09e 177 SUPERFAMILY SSF56053 83 177 1.11E-35 T 28-03-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM393_RS08250 44d2327b2290519916da0546a26af09e 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 1.8E-33 T 28-03-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AM393_RS08250 44d2327b2290519916da0546a26af09e 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 1.8E-33 T 28-03-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AM393_RS08250 44d2327b2290519916da0546a26af09e 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 1.8E-33 T 28-03-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AM393_RS08250 44d2327b2290519916da0546a26af09e 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 28-03-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM393_RS08250 44d2327b2290519916da0546a26af09e 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 36.35 T 28-03-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AM393_RS08250 44d2327b2290519916da0546a26af09e 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 1.6E-72 T 28-03-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AM393_RS08250 44d2327b2290519916da0546a26af09e 177 Pfam PF00347 Ribosomal protein L6 11 82 2.1E-18 T 28-03-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM393_RS08250 44d2327b2290519916da0546a26af09e 177 Pfam PF00347 Ribosomal protein L6 90 164 1.0E-18 T 28-03-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM393_RS08250 44d2327b2290519916da0546a26af09e 177 Gene3D G3DSA:3.90.930.12 86 177 7.5E-39 T 28-03-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM393_RS12015 5ad7c41e0aee2e238743e4e3cddc1e96 514 SUPERFAMILY SSF160964 15 260 1.22E-88 T 28-03-2018 AM393_RS12015 5ad7c41e0aee2e238743e4e3cddc1e96 514 Gene3D G3DSA:3.10.650.10 197 268 3.2E-27 T 28-03-2018 AM393_RS12015 5ad7c41e0aee2e238743e4e3cddc1e96 514 SUPERFAMILY SSF161098 261 503 8.9E-61 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS12015 5ad7c41e0aee2e238743e4e3cddc1e96 514 Gene3D G3DSA:1.20.58.370 4 95 7.3E-31 T 28-03-2018 IPR035277 Maltose transport system permease protein MalF N-terminal domain AM393_RS12015 5ad7c41e0aee2e238743e4e3cddc1e96 514 Pfam PF14785 Maltose transport system permease protein MalF P2 domain 100 260 1.5E-59 T 28-03-2018 IPR029345 Maltose transport system permease protein MalF, P2 domain AM393_RS12015 5ad7c41e0aee2e238743e4e3cddc1e96 514 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 297 501 6.3E-22 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS12015 5ad7c41e0aee2e238743e4e3cddc1e96 514 Gene3D G3DSA:2.40.430.10 119 196 1.6E-28 T 28-03-2018 AM393_RS12015 5ad7c41e0aee2e238743e4e3cddc1e96 514 Gene3D G3DSA:1.10.3720.10 270 514 5.5E-43 T 28-03-2018 AM393_RS03960 89286a93db1dec5cbfc9bf8cc88fb639 160 SUPERFAMILY SSF103088 45 157 3.14E-31 T 28-03-2018 IPR006665 OmpA-like domain AM393_RS03960 89286a93db1dec5cbfc9bf8cc88fb639 160 Pfam PF00691 OmpA family 55 151 9.0E-19 T 28-03-2018 IPR006665 OmpA-like domain AM393_RS03960 89286a93db1dec5cbfc9bf8cc88fb639 160 PRINTS PR01021 OMPA domain signature 56 78 8.7E-12 T 28-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AM393_RS03960 89286a93db1dec5cbfc9bf8cc88fb639 160 PRINTS PR01021 OMPA domain signature 101 117 8.7E-12 T 28-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AM393_RS03960 89286a93db1dec5cbfc9bf8cc88fb639 160 PRINTS PR01021 OMPA domain signature 86 101 8.7E-12 T 28-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AM393_RS03960 89286a93db1dec5cbfc9bf8cc88fb639 160 Gene3D G3DSA:3.30.1330.60 21 160 8.2E-33 T 28-03-2018 IPR006665 OmpA-like domain AM393_RS05655 0aed61365f9a85f80ebcb39585fd05de 318 Pfam PF03824 High-affinity nickel-transport protein 67 174 2.4E-18 T 28-03-2018 IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 AM393_RS05655 0aed61365f9a85f80ebcb39585fd05de 318 Pfam PF03824 High-affinity nickel-transport protein 202 304 2.4E-8 T 28-03-2018 IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 AM393_RS25800 08c2bbc66f727deb75db2fc61947d43a 473 SUPERFAMILY SSF56176 7 221 3.55E-37 T 28-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AM393_RS25800 08c2bbc66f727deb75db2fc61947d43a 473 Gene3D G3DSA:1.10.45.10 368 434 4.2E-5 T 28-03-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 AM393_RS25800 08c2bbc66f727deb75db2fc61947d43a 473 Gene3D G3DSA:3.30.465.10 110 239 4.7E-15 T 28-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AM393_RS25800 08c2bbc66f727deb75db2fc61947d43a 473 Gene3D G3DSA:1.10.45.10 435 453 8.5E-5 T 28-03-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 AM393_RS25800 08c2bbc66f727deb75db2fc61947d43a 473 SUPERFAMILY SSF55103 200 244 3.76E-6 T 28-03-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 AM393_RS25800 08c2bbc66f727deb75db2fc61947d43a 473 SUPERFAMILY SSF55103 277 447 3.76E-6 T 28-03-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 AM393_RS25800 08c2bbc66f727deb75db2fc61947d43a 473 Pfam PF01565 FAD binding domain 54 183 1.0E-25 T 28-03-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 AM393_RS25800 08c2bbc66f727deb75db2fc61947d43a 473 Gene3D G3DSA:3.30.43.10 2 107 1.1E-16 T 28-03-2018 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 AM393_RS17810 6eae05bb7757be4754c2ecfedfbc169e 213 SUPERFAMILY SSF161098 6 194 1.11E-40 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS17810 6eae05bb7757be4754c2ecfedfbc169e 213 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 27 209 5.9E-20 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS17810 6eae05bb7757be4754c2ecfedfbc169e 213 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 6 102 1.2E-28 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AM393_RS17810 6eae05bb7757be4754c2ecfedfbc169e 213 Gene3D G3DSA:1.10.3720.10 2 211 6.6E-36 T 28-03-2018 AM393_RS14700 b6493a3b89ec8626fc26375d2fbfaaaa 327 Pfam PF13343 Bacterial extracellular solute-binding protein 73 289 1.1E-18 T 28-03-2018 AM393_RS14700 b6493a3b89ec8626fc26375d2fbfaaaa 327 Gene3D G3DSA:3.40.190.10 16 134 1.7E-5 T 28-03-2018 AM393_RS14700 b6493a3b89ec8626fc26375d2fbfaaaa 327 Gene3D G3DSA:3.40.190.10 135 275 9.4E-32 T 28-03-2018 AM393_RS14700 b6493a3b89ec8626fc26375d2fbfaaaa 327 TIGRFAM TIGR01276 thiB: thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein 8 327 3.8E-174 T 28-03-2018 IPR005967 Thiamin/thiamin pyrophosphate ABC transporter, substrate-binding protein, Proteobacteria GO:0015888|GO:0030288|GO:0030975 AM393_RS14700 b6493a3b89ec8626fc26375d2fbfaaaa 327 TIGRFAM TIGR01254 sfuA: ABC transporter periplasmic binding protein, thiB subfamily 18 321 3.3E-149 T 28-03-2018 IPR005948 Thiamine/thiamin pyrophosphate-binding periplasmic protein, ABC transporter GO:0015888|GO:0030288|GO:0030975 AM393_RS14700 b6493a3b89ec8626fc26375d2fbfaaaa 327 SUPERFAMILY SSF53850 22 323 7.87E-64 T 28-03-2018 AM393_RS15585 dec36267b7d1dd0b6a38d1e822c1baa7 814 Pfam PF09317 Domain of unknown function (DUF1974) 514 792 2.3E-119 T 28-03-2018 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 AM393_RS15585 dec36267b7d1dd0b6a38d1e822c1baa7 814 SUPERFAMILY SSF56645 117 355 7.46E-45 T 28-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AM393_RS15585 dec36267b7d1dd0b6a38d1e822c1baa7 814 Gene3D G3DSA:2.40.110.10 236 352 9.3E-17 T 28-03-2018 AM393_RS15585 dec36267b7d1dd0b6a38d1e822c1baa7 814 Gene3D G3DSA:1.20.140.10 353 508 3.0E-19 T 28-03-2018 AM393_RS15585 dec36267b7d1dd0b6a38d1e822c1baa7 814 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 237 328 5.1E-9 T 28-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AM393_RS15585 dec36267b7d1dd0b6a38d1e822c1baa7 814 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 360 504 4.5E-12 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AM393_RS15585 dec36267b7d1dd0b6a38d1e822c1baa7 814 SUPERFAMILY SSF47203 360 515 7.73E-21 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AM393_RS15585 dec36267b7d1dd0b6a38d1e822c1baa7 814 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 139 232 6.9E-17 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AM393_RS15585 dec36267b7d1dd0b6a38d1e822c1baa7 814 Gene3D G3DSA:1.10.540.10 75 235 9.2E-30 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AM393_RS02365 37ec517fc49e019823bb8593ed7e27d0 75 Gene3D G3DSA:1.10.3390.10 2 71 7.3E-36 T 28-03-2018 IPR023202 YejL-like domain AM393_RS02365 37ec517fc49e019823bb8593ed7e27d0 75 PIRSF PIRSF006188 1 72 4.8E-36 T 28-03-2018 IPR009857 Uncharacterised protein family UPF0352 AM393_RS02365 37ec517fc49e019823bb8593ed7e27d0 75 Pfam PF07208 Protein of unknown function (DUF1414) 26 69 1.1E-25 T 28-03-2018 IPR009857 Uncharacterised protein family UPF0352 AM393_RS02365 37ec517fc49e019823bb8593ed7e27d0 75 Hamap MF_00816 UPF0352 protein YejL [yejL]. 1 71 23.915 T 28-03-2018 IPR009857 Uncharacterised protein family UPF0352 AM393_RS02365 37ec517fc49e019823bb8593ed7e27d0 75 ProDom PD027794 UPF0352 YEJL NTHI1007 CPS_2611 VF1649 VV1166 HD1515 VP2129 YPO1261/Y2923/YP0880 ECA2748 1 69 2.0E-28 T 28-03-2018 IPR009857 Uncharacterised protein family UPF0352 AM393_RS02365 37ec517fc49e019823bb8593ed7e27d0 75 SUPERFAMILY SSF158651 1 74 4.32E-32 T 28-03-2018 IPR023202 YejL-like domain AM393_RS15460 296b23b45ce5b1d4c16b8a7481e1de75 135 Pfam PF16358 RcsF lipoprotein 27 133 8.5E-50 T 28-03-2018 IPR030852 Outer membrane lipoprotein RcsF GO:0009279|GO:0035556 AM393_RS15460 296b23b45ce5b1d4c16b8a7481e1de75 135 Hamap MF_00976 Outer membrane lipoprotein RcsF [rcsF]. 1 134 36.333 T 28-03-2018 IPR030852 Outer membrane lipoprotein RcsF GO:0009279|GO:0035556 AM393_RS08465 3ba6a6a921416924d686f2e8f1989bb5 692 Pfam PF13515 Fusaric acid resistance protein-like 376 498 2.0E-19 T 28-03-2018 AM393_RS08465 3ba6a6a921416924d686f2e8f1989bb5 692 Pfam PF12805 FUSC-like inner membrane protein yccS 63 330 1.4E-67 T 28-03-2018 IPR032692 Integral membrane protein YccS, N-terminal AM393_RS08465 3ba6a6a921416924d686f2e8f1989bb5 692 TIGRFAM TIGR01667 YCCS_YHJK: integral membrane protein, YccS/YhfK family 12 674 2.0E-231 T 28-03-2018 IPR010020 Integral membrane protein, YccS/YhfK AM393_RS17790 f1626b3bd85960a5571612269d6c47b0 302 Pfam PF00892 EamA-like transporter family 152 284 1.4E-14 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM393_RS17790 f1626b3bd85960a5571612269d6c47b0 302 Pfam PF00892 EamA-like transporter family 10 136 2.8E-14 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM393_RS17790 f1626b3bd85960a5571612269d6c47b0 302 SUPERFAMILY SSF103481 47 139 1.05E-7 T 28-03-2018 AM393_RS17790 f1626b3bd85960a5571612269d6c47b0 302 SUPERFAMILY SSF103481 186 285 1.22E-8 T 28-03-2018 AM393_RS09210 b65e15c153addfadfb687311cc4f8586 559 TIGRFAM TIGR03368 cellulose_yhjU: cellulose synthase operon protein YhjU 21 557 1.5E-234 T 28-03-2018 IPR017744 Cellulose biosynthesis protein BcsG AM393_RS09210 b65e15c153addfadfb687311cc4f8586 559 Gene3D G3DSA:3.40.720.10 159 482 0.0011 T 28-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AM393_RS09210 b65e15c153addfadfb687311cc4f8586 559 Pfam PF11658 Cellulose biosynthesis protein BcsG 23 554 2.2E-237 T 28-03-2018 IPR017744 Cellulose biosynthesis protein BcsG AM393_RS27020 03edbf1ed9f07826ff7b77423772d4c8 474 Pfam PF03743 Bacterial conjugation TrbI-like protein 209 405 3.0E-29 T 28-03-2018 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI AM393_RS27020 03edbf1ed9f07826ff7b77423772d4c8 474 Gene3D G3DSA:1.20.5.1000 69 125 1.4E-4 T 28-03-2018 AM393_RS12185 2eaffed8bce691231efdcfb8bc6fb5f3 253 Pfam PF00459 Inositol monophosphatase family 15 227 1.7E-46 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AM393_RS12185 2eaffed8bce691231efdcfb8bc6fb5f3 253 Gene3D G3DSA:3.30.540.10 2 144 5.4E-38 T 28-03-2018 AM393_RS12185 2eaffed8bce691231efdcfb8bc6fb5f3 253 SUPERFAMILY SSF56655 7 251 1.83E-62 T 28-03-2018 AM393_RS12185 2eaffed8bce691231efdcfb8bc6fb5f3 253 PRINTS PR00377 Inositol monophosphatase superfamily signature 37 57 1.8E-32 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AM393_RS12185 2eaffed8bce691231efdcfb8bc6fb5f3 253 PRINTS PR00377 Inositol monophosphatase superfamily signature 59 75 1.8E-32 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AM393_RS12185 2eaffed8bce691231efdcfb8bc6fb5f3 253 PRINTS PR00377 Inositol monophosphatase superfamily signature 78 94 1.8E-32 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AM393_RS12185 2eaffed8bce691231efdcfb8bc6fb5f3 253 PRINTS PR00377 Inositol monophosphatase superfamily signature 202 226 1.8E-32 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AM393_RS12185 2eaffed8bce691231efdcfb8bc6fb5f3 253 PRINTS PR00377 Inositol monophosphatase superfamily signature 127 150 1.8E-32 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AM393_RS12185 2eaffed8bce691231efdcfb8bc6fb5f3 253 PRINTS PR00377 Inositol monophosphatase superfamily signature 171 192 1.8E-32 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AM393_RS12185 2eaffed8bce691231efdcfb8bc6fb5f3 253 Gene3D G3DSA:3.40.190.80 145 253 1.4E-18 T 28-03-2018 AM393_RS27040 a3c049715813920c028112edee4a97c6 122 Pfam PF05513 TraA 1 120 1.8E-68 T 28-03-2018 IPR008873 TraA GO:0000746|GO:0005576 AM393_RS27040 a3c049715813920c028112edee4a97c6 122 TIGRFAM TIGR02758 TraA_TIGR: type IV conjugative transfer system pilin TraA 26 122 1.0E-31 T 28-03-2018 IPR008873 TraA GO:0000746|GO:0005576 AM393_RS15665 17c8c984c1741c0827b2e3cecbd2ac02 155 Hamap MF_01903 Xanthine phosphoribosyltransferase [gpt]. 1 155 40.16 T 28-03-2018 IPR023747 Xanthine-guanine phosphoribosyltransferase GO:0000310 KEGG: 00230+2.4.2.22 AM393_RS15665 17c8c984c1741c0827b2e3cecbd2ac02 155 Pfam PF00156 Phosphoribosyl transferase domain 12 147 3.2E-15 T 28-03-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 AM393_RS15665 17c8c984c1741c0827b2e3cecbd2ac02 155 Gene3D G3DSA:3.40.50.2020 1 155 4.8E-25 T 28-03-2018 AM393_RS15665 17c8c984c1741c0827b2e3cecbd2ac02 155 SUPERFAMILY SSF53271 4 144 4.06E-31 T 28-03-2018 IPR029057 Phosphoribosyltransferase-like AM393_RS13055 fb44921a7c2b5a0c4e6c093e5ab2d3f5 500 ProSitePatterns PS00211 ABC transporters family signature. 403 417 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS13055 fb44921a7c2b5a0c4e6c093e5ab2d3f5 500 Pfam PF00005 ABC transporter 279 430 4.5E-18 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS13055 fb44921a7c2b5a0c4e6c093e5ab2d3f5 500 Pfam PF00005 ABC transporter 25 174 2.7E-31 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS13055 fb44921a7c2b5a0c4e6c093e5ab2d3f5 500 SMART SM00382 285 479 0.4 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS13055 fb44921a7c2b5a0c4e6c093e5ab2d3f5 500 SMART SM00382 34 222 6.3E-13 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS13055 fb44921a7c2b5a0c4e6c093e5ab2d3f5 500 SUPERFAMILY SSF52540 9 232 3.91E-60 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS13055 fb44921a7c2b5a0c4e6c093e5ab2d3f5 500 Gene3D G3DSA:3.40.50.300 6 263 8.6E-56 T 28-03-2018 AM393_RS13055 fb44921a7c2b5a0c4e6c093e5ab2d3f5 500 SUPERFAMILY SSF52540 270 489 1.36E-44 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS13055 fb44921a7c2b5a0c4e6c093e5ab2d3f5 500 Gene3D G3DSA:3.40.50.300 267 491 2.2E-38 T 28-03-2018 AM393_RS15455 180fd4cd1dde3a6f71317066f61efb35 235 Gene3D G3DSA:2.40.30.70 5 149 7.1E-51 T 28-03-2018 IPR023370 TsaA-like domain AM393_RS15455 180fd4cd1dde3a6f71317066f61efb35 235 SUPERFAMILY SSF118196 2 229 1.57E-84 T 28-03-2018 IPR023370 TsaA-like domain AM393_RS15455 180fd4cd1dde3a6f71317066f61efb35 235 ProSitePatterns PS01318 TsaA-like domain signature. 87 98 - T 28-03-2018 IPR023368 Uncharacterised protein family UPF0066, conserved site AM393_RS15455 180fd4cd1dde3a6f71317066f61efb35 235 TIGRFAM TIGR00104 tRNA_TsaA: tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA 1 149 1.2E-58 T 28-03-2018 IPR023370 TsaA-like domain AM393_RS15455 180fd4cd1dde3a6f71317066f61efb35 235 Pfam PF01980 Uncharacterised protein family UPF0066 21 142 6.1E-40 T 28-03-2018 IPR023370 TsaA-like domain AM393_RS15455 180fd4cd1dde3a6f71317066f61efb35 235 Gene3D G3DSA:3.30.2310.10 150 231 1.6E-22 T 28-03-2018 AM393_RS05770 280459f84fe9111134f8e3e352f98098 109 SUPERFAMILY SSF46785 6 94 3.23E-25 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS05770 280459f84fe9111134f8e3e352f98098 109 SMART SM00418 7 85 4.1E-28 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM393_RS05770 280459f84fe9111134f8e3e352f98098 109 ProSitePatterns PS00846 Bacterial regulatory proteins, arsR family signature. 31 49 - T 28-03-2018 IPR018334 ArsR-type transcription regulator, HTH motif GO:0003700|GO:0005622|GO:0006355 AM393_RS05770 280459f84fe9111134f8e3e352f98098 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 9 24 2.8E-25 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM393_RS05770 280459f84fe9111134f8e3e352f98098 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 29 40 2.8E-25 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM393_RS05770 280459f84fe9111134f8e3e352f98098 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 57 72 2.8E-25 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM393_RS05770 280459f84fe9111134f8e3e352f98098 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 42 57 2.8E-25 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM393_RS05770 280459f84fe9111134f8e3e352f98098 109 Gene3D G3DSA:1.10.10.10 5 98 9.8E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS05770 280459f84fe9111134f8e3e352f98098 109 Pfam PF01022 Bacterial regulatory protein, arsR family 14 59 1.3E-15 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM393_RS21570 841b39b3f6b81dabca3d10ca64373da8 225 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 84 175 2.8E-13 T 28-03-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 AM393_RS21570 841b39b3f6b81dabca3d10ca64373da8 225 SMART SM00702 1 176 1.7E-25 T 28-03-2018 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 AM393_RS21570 841b39b3f6b81dabca3d10ca64373da8 225 Hamap MF_00657 PKHD-type hydroxylase YbiX [ybiX]. 1 225 44.882 T 28-03-2018 IPR023550 PKHD-type hydroxylase GO:0016706|GO:0055114 AM393_RS21570 841b39b3f6b81dabca3d10ca64373da8 225 Gene3D G3DSA:2.60.120.620 1 186 1.1E-31 T 28-03-2018 AM393_RS22635 81d015735366e0a2365afa4f3663d185 316 Gene3D G3DSA:3.40.50.720 149 260 9.9E-8 T 28-03-2018 AM393_RS22635 81d015735366e0a2365afa4f3663d185 316 Gene3D G3DSA:3.90.180.10 3 148 8.1E-27 T 28-03-2018 AM393_RS22635 81d015735366e0a2365afa4f3663d185 316 SUPERFAMILY SSF50129 4 120 1.52E-24 T 28-03-2018 IPR011032 GroES-like AM393_RS22635 81d015735366e0a2365afa4f3663d185 316 SUPERFAMILY SSF51735 115 276 9.47E-19 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS22635 81d015735366e0a2365afa4f3663d185 316 SMART SM00829 15 311 0.0039 T 28-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AM393_RS24460 0c414f544890046da55cc3f2de6595ab 390 SUPERFAMILY SSF55347 150 327 2.4E-29 T 28-03-2018 AM393_RS24460 0c414f544890046da55cc3f2de6595ab 390 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 12 142 6.0E-26 T 28-03-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 AM393_RS24460 0c414f544890046da55cc3f2de6595ab 390 Gene3D G3DSA:3.40.50.720 7 157 1.7E-29 T 28-03-2018 AM393_RS24460 0c414f544890046da55cc3f2de6595ab 390 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 154 277 5.4E-10 T 28-03-2018 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 AM393_RS24460 0c414f544890046da55cc3f2de6595ab 390 Gene3D G3DSA:3.30.360.10 158 390 2.5E-35 T 28-03-2018 AM393_RS24460 0c414f544890046da55cc3f2de6595ab 390 SUPERFAMILY SSF51735 7 173 4.11E-40 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS06440 9d10964f11a00fc751c4e76ff4db588c 217 TIGRFAM TIGR03746 conj_TIGR03746: integrating conjugative element protein, PFL_4703 family 4 204 1.4E-94 T 28-03-2018 IPR021548 Protein of unknown function DUF2895 AM393_RS06440 9d10964f11a00fc751c4e76ff4db588c 217 Pfam PF11444 Protein of unknown function (DUF2895) 6 203 3.3E-91 T 28-03-2018 IPR021548 Protein of unknown function DUF2895 AM393_RS06760 4bb96dc7619f0005734634107f9c9092 449 Pfam PF00512 His Kinase A (phospho-acceptor) domain 238 301 6.3E-13 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM393_RS06760 4bb96dc7619f0005734634107f9c9092 449 Gene3D G3DSA:3.30.565.10 297 449 1.5E-29 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS06760 4bb96dc7619f0005734634107f9c9092 449 SMART SM00388 236 302 3.3E-14 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM393_RS06760 4bb96dc7619f0005734634107f9c9092 449 SMART SM00387 348 449 1.4E-21 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS06760 4bb96dc7619f0005734634107f9c9092 449 SUPERFAMILY SSF47384 219 301 2.94E-16 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM393_RS06760 4bb96dc7619f0005734634107f9c9092 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 413 431 1.1E-5 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM393_RS06760 4bb96dc7619f0005734634107f9c9092 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 381 395 1.1E-5 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM393_RS06760 4bb96dc7619f0005734634107f9c9092 449 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 353 444 4.7E-17 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS06760 4bb96dc7619f0005734634107f9c9092 449 Gene3D G3DSA:1.20.5.1040 130 183 4.7E-13 T 28-03-2018 AM393_RS06760 4bb96dc7619f0005734634107f9c9092 449 Gene3D G3DSA:1.20.5.1040 7 58 1.1E-8 T 28-03-2018 AM393_RS06760 4bb96dc7619f0005734634107f9c9092 449 Gene3D G3DSA:1.10.287.130 220 296 1.1E-12 T 28-03-2018 AM393_RS06760 4bb96dc7619f0005734634107f9c9092 449 SUPERFAMILY SSF55874 291 448 9.95E-32 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS22115 b565ad0a9c227c5ac01c5fb9192a2ea9 466 Pfam PF17288 Terminase RNAseH like domain 345 451 3.0E-7 T 28-03-2018 IPR035413 Phage terminase large subunit, C-terminal AM393_RS22115 b565ad0a9c227c5ac01c5fb9192a2ea9 466 Pfam PF04466 Phage terminase large subunit 24 213 7.8E-40 T 28-03-2018 IPR035412 Phage terminase large subunit, N-terminal AM393_RS22115 b565ad0a9c227c5ac01c5fb9192a2ea9 466 TIGRFAM TIGR01547 phage_term_2: phage terminase, large subunit, PBSX family 25 422 9.9E-43 T 28-03-2018 IPR006437 Bacteriophage terminase, large subunit GO:0006323 AM393_RS21145 a8effc05b97f36666a2d32df709347c4 230 Pfam PF00117 Glutamine amidotransferase class-I 27 220 2.1E-17 T 28-03-2018 IPR017926 Glutamine amidotransferase AM393_RS21145 a8effc05b97f36666a2d32df709347c4 230 SUPERFAMILY SSF52317 5 229 6.17E-42 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AM393_RS21145 a8effc05b97f36666a2d32df709347c4 230 Gene3D G3DSA:3.40.50.880 1 230 1.4E-34 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AM393_RS18345 c405921769b00931434b4c264d82a7f4 343 Gene3D G3DSA:3.40.50.300 1 140 2.1E-18 T 28-03-2018 AM393_RS18345 c405921769b00931434b4c264d82a7f4 343 Gene3D G3DSA:1.20.272.10 223 343 6.4E-25 T 28-03-2018 AM393_RS18345 c405921769b00931434b4c264d82a7f4 343 Pfam PF06144 DNA polymerase III, delta subunit 21 190 3.0E-45 T 28-03-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 AM393_RS18345 c405921769b00931434b4c264d82a7f4 343 Pfam PF14840 Processivity clamp loader gamma complex DNA pol III C-term 214 338 1.4E-73 T 28-03-2018 IPR032780 DNA polymerase III subunit delta, C-terminal KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM393_RS18345 c405921769b00931434b4c264d82a7f4 343 SUPERFAMILY SSF48019 212 334 4.93E-33 T 28-03-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 AM393_RS18345 c405921769b00931434b4c264d82a7f4 343 Gene3D G3DSA:1.10.8.60 143 222 4.2E-23 T 28-03-2018 AM393_RS18345 c405921769b00931434b4c264d82a7f4 343 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 18 332 1.7E-102 T 28-03-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 AM393_RS18345 c405921769b00931434b4c264d82a7f4 343 SUPERFAMILY SSF52540 1 210 6.54E-54 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS04345 f235871edebcd55317fc40a8b2b7cf01 518 TIGRFAM TIGR01434 glu_cys_ligase: glutamate--cysteine ligase 6 517 2.3E-272 T 28-03-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 AM393_RS04345 f235871edebcd55317fc40a8b2b7cf01 518 Pfam PF04262 Glutamate-cysteine ligase 9 380 5.0E-172 T 28-03-2018 IPR007370 Glutamate--cysteine ligase GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 AM393_RS04345 f235871edebcd55317fc40a8b2b7cf01 518 Hamap MF_00578 Glutamate--cysteine ligase [gshA]. 1 518 231.427 T 28-03-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 AM393_RS04345 f235871edebcd55317fc40a8b2b7cf01 518 SUPERFAMILY SSF55931 4 514 1.7E-202 T 28-03-2018 AM393_RS28145 4d0b6d5fe07e3bb886408fa0739d74da 142 Pfam PF16816 DotD protein 32 131 9.9E-20 T 28-03-2018 IPR031817 DotD protein AM393_RS12355 7c1980078c32d3c3115e7921cf747869 305 Pfam PF08843 Nucleotidyl transferase AbiEii toxin, Type IV TA system 14 278 4.3E-38 T 28-03-2018 IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system AM393_RS27405 b2c2b1cdf113489ce2a0fd5cb1e250fd 461 Pfam PF02321 Outer membrane efflux protein 65 248 2.4E-22 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AM393_RS27405 b2c2b1cdf113489ce2a0fd5cb1e250fd 461 Pfam PF02321 Outer membrane efflux protein 275 456 9.8E-28 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AM393_RS27405 b2c2b1cdf113489ce2a0fd5cb1e250fd 461 Gene3D G3DSA:1.20.1600.10 19 461 2.7E-92 T 28-03-2018 AM393_RS27405 b2c2b1cdf113489ce2a0fd5cb1e250fd 461 SUPERFAMILY SSF56954 2 460 2.09E-102 T 28-03-2018 AM393_RS27405 b2c2b1cdf113489ce2a0fd5cb1e250fd 461 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 13 458 7.1E-107 T 28-03-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 AM393_RS01565 a4cb7b87d3ead2ceb6ec1d8183fa79db 243 Pfam PF04982 HPP family 62 181 8.3E-41 T 28-03-2018 IPR007065 HPP AM393_RS25280 8fb955ad4f0986d273a81414cfcc0c17 192 Pfam PF13302 Acetyltransferase (GNAT) domain 18 157 3.5E-16 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AM393_RS25280 8fb955ad4f0986d273a81414cfcc0c17 192 SUPERFAMILY SSF55729 13 182 5.06E-39 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM393_RS25280 8fb955ad4f0986d273a81414cfcc0c17 192 Gene3D G3DSA:3.40.630.30 3 184 7.6E-25 T 28-03-2018 AM393_RS06205 11d36fc74b1651672d4fd136d72a0f99 96 TIGRFAM TIGR00251 TIGR00251: TIGR00251 family protein 6 89 1.9E-30 T 28-03-2018 IPR005228 Conserved hypothetical protein CHP00251 AM393_RS06205 11d36fc74b1651672d4fd136d72a0f99 96 Hamap MF_00634 UPF0235 protein YggU [yggU]. 7 93 20.6 T 28-03-2018 IPR003746 Protein of unknown function DUF167 AM393_RS06205 11d36fc74b1651672d4fd136d72a0f99 96 Pfam PF02594 Uncharacterised ACR, YggU family COG1872 10 81 1.3E-26 T 28-03-2018 IPR003746 Protein of unknown function DUF167 AM393_RS06205 11d36fc74b1651672d4fd136d72a0f99 96 SMART SM01152 7 83 1.0E-38 T 28-03-2018 IPR003746 Protein of unknown function DUF167 AM393_RS06205 11d36fc74b1651672d4fd136d72a0f99 96 Gene3D G3DSA:3.30.1200.10 1 96 6.5E-32 T 28-03-2018 IPR003746 Protein of unknown function DUF167 AM393_RS06205 11d36fc74b1651672d4fd136d72a0f99 96 SUPERFAMILY SSF69786 3 92 8.11E-32 T 28-03-2018 IPR003746 Protein of unknown function DUF167 AM393_RS00775 3a5f8381564b803b70042910c5131632 262 Gene3D G3DSA:3.40.50.1000 15 260 2.1E-29 T 28-03-2018 IPR023214 HAD-like domain AM393_RS00775 3a5f8381564b803b70042910c5131632 262 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 17 210 1.1E-24 T 28-03-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 AM393_RS00775 3a5f8381564b803b70042910c5131632 262 SUPERFAMILY SSF56784 16 244 3.33E-45 T 28-03-2018 IPR023214 HAD-like domain AM393_RS00775 3a5f8381564b803b70042910c5131632 262 Pfam PF02358 Trehalose-phosphatase 18 230 2.5E-55 T 28-03-2018 IPR003337 Trehalose-phosphatase GO:0003824|GO:0005992 AM393_RS00775 3a5f8381564b803b70042910c5131632 262 TIGRFAM TIGR00685 T6PP: trehalose-phosphatase 15 244 3.7E-66 T 28-03-2018 IPR003337 Trehalose-phosphatase GO:0003824|GO:0005992 AM393_RS24855 82e2c1c45d92cef40cc66c1121acc4e6 218 Gene3D G3DSA:1.20.950.20 1 217 2.8E-55 T 28-03-2018 AM393_RS24855 82e2c1c45d92cef40cc66c1121acc4e6 218 TIGRFAM TIGR01583 formate-DH-gamm: formate dehydrogenase, gamma subunit 7 206 1.9E-70 T 28-03-2018 IPR006471 Formate dehydrogenase, gamma subunit GO:0008863|GO:0009326|GO:0016021|GO:0045333 AM393_RS24855 82e2c1c45d92cef40cc66c1121acc4e6 218 Pfam PF01292 Prokaryotic cytochrome b561 12 186 2.5E-19 T 28-03-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 AM393_RS24855 82e2c1c45d92cef40cc66c1121acc4e6 218 SUPERFAMILY SSF81342 3 208 2.67E-54 T 28-03-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 AM393_RS06770 c43a76257060c0ad6c4886b5684fb30a 104 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 87 6.8E-26 T 28-03-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain AM393_RS06770 c43a76257060c0ad6c4886b5684fb30a 104 Gene3D G3DSA:3.30.70.100 1 102 2.3E-21 T 28-03-2018 AM393_RS06770 c43a76257060c0ad6c4886b5684fb30a 104 SUPERFAMILY SSF54909 1 98 1.04E-29 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel AM393_RS06105 b58267f16df5df06e54762ce847dae76 107 Pfam PF00355 Rieske [2Fe-2S] domain 2 89 1.2E-19 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AM393_RS06105 b58267f16df5df06e54762ce847dae76 107 Gene3D G3DSA:2.102.10.10 1 107 1.4E-26 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AM393_RS06105 b58267f16df5df06e54762ce847dae76 107 SUPERFAMILY SSF50022 1 101 7.59E-32 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AM393_RS25520 c08553a666041d6a146282f859d09a0e 135 ProSitePatterns PS00934 Glyoxalase I signature 1. 5 26 - T 28-03-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 AM393_RS25520 c08553a666041d6a146282f859d09a0e 135 SUPERFAMILY SSF54593 1 128 3.22E-35 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM393_RS25520 c08553a666041d6a146282f859d09a0e 135 Gene3D G3DSA:3.10.180.10 1 135 4.2E-37 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM393_RS25520 c08553a666041d6a146282f859d09a0e 135 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 123 5.1E-25 T 28-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AM393_RS25520 c08553a666041d6a146282f859d09a0e 135 ProSitePatterns PS00935 Glyoxalase I signature 2. 69 81 - T 28-03-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 AM393_RS25520 c08553a666041d6a146282f859d09a0e 135 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 2 134 2.8E-69 T 28-03-2018 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 AM393_RS16455 4aea76c6e2dd6a138de54930d8494aef 105 Pfam PF01722 BolA-like protein 11 84 2.7E-28 T 28-03-2018 IPR002634 BolA protein AM393_RS16455 4aea76c6e2dd6a138de54930d8494aef 105 PIRSF PIRSF003113 1 100 4.2E-32 T 28-03-2018 IPR002634 BolA protein AM393_RS16455 4aea76c6e2dd6a138de54930d8494aef 105 Gene3D G3DSA:3.30.300.90 1 91 1.1E-27 T 28-03-2018 AM393_RS16455 4aea76c6e2dd6a138de54930d8494aef 105 SUPERFAMILY SSF82657 1 89 1.05E-30 T 28-03-2018 IPR002634 BolA protein AM393_RS12075 b68d2a65df794b8828326ec6d20fc627 69 Gene3D G3DSA:1.10.1470.10 1 69 3.9E-25 T 28-03-2018 IPR008462 CsbD-like domain AM393_RS12075 b68d2a65df794b8828326ec6d20fc627 69 SUPERFAMILY SSF69047 1 69 8.11E-28 T 28-03-2018 IPR008462 CsbD-like domain AM393_RS12075 b68d2a65df794b8828326ec6d20fc627 69 Pfam PF05532 CsbD-like 4 56 3.4E-22 T 28-03-2018 IPR008462 CsbD-like domain AM393_RS12075 b68d2a65df794b8828326ec6d20fc627 69 PIRSF PIRSF039008 1 66 1.1E-32 T 28-03-2018 IPR026042 Stress response protein YjbJ AM393_RS19385 f43c02438c84b95fa668cb354f57d5d9 400 Gene3D G3DSA:3.40.710.10 23 284 1.4E-46 T 28-03-2018 AM393_RS19385 f43c02438c84b95fa668cb354f57d5d9 400 Gene3D G3DSA:2.60.410.10 285 376 6.6E-20 T 28-03-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AM393_RS19385 f43c02438c84b95fa668cb354f57d5d9 400 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 32 265 7.1E-98 T 28-03-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 AM393_RS19385 f43c02438c84b95fa668cb354f57d5d9 400 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 151 164 6.0E-18 T 28-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AM393_RS19385 f43c02438c84b95fa668cb354f57d5d9 400 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 65 76 6.0E-18 T 28-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AM393_RS19385 f43c02438c84b95fa668cb354f57d5d9 400 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 124 141 6.0E-18 T 28-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AM393_RS19385 f43c02438c84b95fa668cb354f57d5d9 400 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 285 376 1.3E-22 T 28-03-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AM393_RS19385 f43c02438c84b95fa668cb354f57d5d9 400 SMART SM00936 285 376 2.1E-33 T 28-03-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AM393_RS19385 f43c02438c84b95fa668cb354f57d5d9 400 SUPERFAMILY SSF56601 12 285 1.67E-82 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AM393_RS19385 f43c02438c84b95fa668cb354f57d5d9 400 SUPERFAMILY SSF69189 285 378 3.14E-24 T 28-03-2018 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AM393_RS15390 9ebf85640fac1f7f2f4ce2b12dadcdf7 199 Gene3D G3DSA:3.30.420.10 3 199 1.0E-68 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM393_RS15390 9ebf85640fac1f7f2f4ce2b12dadcdf7 199 SUPERFAMILY SSF53098 3 195 4.7E-70 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM393_RS15390 9ebf85640fac1f7f2f4ce2b12dadcdf7 199 Hamap MF_00052_B Ribonuclease HII [rnhB]. 11 190 38.736 T 28-03-2018 IPR022898 Ribonuclease HII GO:0004523 AM393_RS15390 9ebf85640fac1f7f2f4ce2b12dadcdf7 199 Pfam PF01351 Ribonuclease HII 13 188 4.5E-38 T 28-03-2018 IPR024567 Ribonuclease HII/HIII domain AM393_RS00340 b891a65de80507d5aeb5d403ff819ce6 89 Pfam PF03776 Septum formation topological specificity factor MinE 14 82 4.5E-25 T 28-03-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 AM393_RS00340 b891a65de80507d5aeb5d403ff819ce6 89 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 86 19.902 T 28-03-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 AM393_RS00340 b891a65de80507d5aeb5d403ff819ce6 89 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 83 9.0E-37 T 28-03-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 AM393_RS00340 b891a65de80507d5aeb5d403ff819ce6 89 Gene3D G3DSA:3.30.1070.10 1 83 2.8E-29 T 28-03-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 AM393_RS00340 b891a65de80507d5aeb5d403ff819ce6 89 SUPERFAMILY SSF55229 32 85 1.44E-18 T 28-03-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 AM393_RS20860 bf3d930b027fd59e0c8703aee0699785 319 Pfam PF01476 LysM domain 45 89 1.9E-7 T 28-03-2018 IPR018392 LysM domain AM393_RS20860 bf3d930b027fd59e0c8703aee0699785 319 Pfam PF03734 L,D-transpeptidase catalytic domain 102 238 2.0E-18 T 28-03-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 AM393_RS20860 bf3d930b027fd59e0c8703aee0699785 319 SMART SM00257 43 89 1.1E-6 T 28-03-2018 IPR018392 LysM domain AM393_RS20860 bf3d930b027fd59e0c8703aee0699785 319 Gene3D G3DSA:2.40.440.10 95 240 1.2E-28 T 28-03-2018 AM393_RS20860 bf3d930b027fd59e0c8703aee0699785 319 SUPERFAMILY SSF54106 44 89 7.46E-5 T 28-03-2018 IPR018392 LysM domain AM393_RS20860 bf3d930b027fd59e0c8703aee0699785 319 Gene3D G3DSA:3.10.350.10 39 92 1.1E-8 T 28-03-2018 AM393_RS20860 bf3d930b027fd59e0c8703aee0699785 319 SUPERFAMILY SSF141523 100 238 2.09E-27 T 28-03-2018 AM393_RS11420 f437d2b3a90a8665a9b2d39c0c27d844 300 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 8 296 58.445 T 28-03-2018 IPR023009 Tyrosine recombinase XerC/XerD AM393_RS11420 f437d2b3a90a8665a9b2d39c0c27d844 300 Pfam PF00589 Phage integrase family 115 282 1.2E-52 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM393_RS11420 f437d2b3a90a8665a9b2d39c0c27d844 300 Gene3D G3DSA:1.10.443.10 116 290 2.1E-43 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM393_RS11420 f437d2b3a90a8665a9b2d39c0c27d844 300 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 12 298 4.9E-107 T 28-03-2018 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007049|GO:0007059|GO:0015074|GO:0051301 AM393_RS11420 f437d2b3a90a8665a9b2d39c0c27d844 300 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 11 93 1.4E-22 T 28-03-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 AM393_RS11420 f437d2b3a90a8665a9b2d39c0c27d844 300 SUPERFAMILY SSF56349 109 294 5.59E-55 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AM393_RS11420 f437d2b3a90a8665a9b2d39c0c27d844 300 Gene3D G3DSA:1.10.150.130 2 115 3.6E-22 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal AM393_RS11420 f437d2b3a90a8665a9b2d39c0c27d844 300 SUPERFAMILY SSF47823 9 101 6.08E-10 T 28-03-2018 IPR010998 Integrase, Lambda-type, N-terminal AM393_RS29010 be77e1eeb94bc6901e6c51da9e3bb445 121 Gene3D G3DSA:1.10.287.910 21 73 2.6E-19 T 28-03-2018 AM393_RS29010 be77e1eeb94bc6901e6c51da9e3bb445 121 Pfam PF02411 MerT mercuric transport protein 7 121 2.3E-63 T 28-03-2018 IPR003457 Mercuric transport protein MerT GO:0015097|GO:0015694|GO:0016020 AM393_RS09940 2d63b7bd831aba3c3be41bf6900fd676 349 SUPERFAMILY SSF51735 151 312 9.03E-44 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS09940 2d63b7bd831aba3c3be41bf6900fd676 349 Pfam PF00107 Zinc-binding dehydrogenase 185 308 3.9E-25 T 28-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AM393_RS09940 2d63b7bd831aba3c3be41bf6900fd676 349 Gene3D G3DSA:3.40.50.720 173 282 1.0E-22 T 28-03-2018 AM393_RS09940 2d63b7bd831aba3c3be41bf6900fd676 349 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 142 3.7E-26 T 28-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AM393_RS09940 2d63b7bd831aba3c3be41bf6900fd676 349 Gene3D G3DSA:3.40.50.20 283 341 5.0E-5 T 28-03-2018 AM393_RS09940 2d63b7bd831aba3c3be41bf6900fd676 349 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 61 75 - T 28-03-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 AM393_RS09940 2d63b7bd831aba3c3be41bf6900fd676 349 SMART SM00829 7 342 1.6E-4 T 28-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AM393_RS09940 2d63b7bd831aba3c3be41bf6900fd676 349 Gene3D G3DSA:3.90.180.10 1 172 5.1E-46 T 28-03-2018 AM393_RS09940 2d63b7bd831aba3c3be41bf6900fd676 349 SUPERFAMILY SSF50129 8 172 7.23E-47 T 28-03-2018 IPR011032 GroES-like AM393_RS20455 8b806d243a90196da52a9872f2e36b12 130 Gene3D G3DSA:3.30.1330.40 1 128 7.4E-33 T 28-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AM393_RS20455 8b806d243a90196da52a9872f2e36b12 130 SUPERFAMILY SSF55298 1 127 1.26E-36 T 28-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AM393_RS20455 8b806d243a90196da52a9872f2e36b12 130 Hamap MF_00831 Putative aminoacrylate peracid reductase RutC [rutC]. 1 128 45.072 T 28-03-2018 IPR019898 Putative aminoacrylate peracid reductase RutC AM393_RS20455 8b806d243a90196da52a9872f2e36b12 130 TIGRFAM TIGR03610 RutC: pyrimidine utilization protein C 1 127 1.4E-76 T 28-03-2018 IPR019898 Putative aminoacrylate peracid reductase RutC AM393_RS20455 8b806d243a90196da52a9872f2e36b12 130 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 102 120 - T 28-03-2018 IPR019897 RidA, conserved site AM393_RS20455 8b806d243a90196da52a9872f2e36b12 130 Pfam PF01042 Endoribonuclease L-PSP 13 125 1.4E-31 T 28-03-2018 IPR006175 YjgF/YER057c/UK114 family AM393_RS05320 2fd7fe65b399543d9e3b25c08b444891 184 SUPERFAMILY SSF143414 3 93 3.14E-24 T 28-03-2018 AM393_RS05320 2fd7fe65b399543d9e3b25c08b444891 184 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 1 66 1.0E-24 T 28-03-2018 AM393_RS05320 2fd7fe65b399543d9e3b25c08b444891 184 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 95 158 3.0E-26 T 28-03-2018 AM393_RS05320 2fd7fe65b399543d9e3b25c08b444891 184 SMART SM00877 3 77 4.0E-26 T 28-03-2018 IPR000249 Microcompartment protein, bacteria AM393_RS05320 2fd7fe65b399543d9e3b25c08b444891 184 SMART SM00877 95 173 5.7E-25 T 28-03-2018 IPR000249 Microcompartment protein, bacteria AM393_RS05320 2fd7fe65b399543d9e3b25c08b444891 184 SUPERFAMILY SSF143414 95 181 1.7E-22 T 28-03-2018 AM393_RS05320 2fd7fe65b399543d9e3b25c08b444891 184 PIRSF PIRSF034834 1 183 2.4E-76 T 28-03-2018 IPR011238 Polyhedral organelle shell protein PduT AM393_RS05320 2fd7fe65b399543d9e3b25c08b444891 184 Pfam PF00936 BMC domain 4 76 4.4E-21 T 28-03-2018 IPR000249 Microcompartment protein, bacteria AM393_RS05320 2fd7fe65b399543d9e3b25c08b444891 184 Pfam PF00936 BMC domain 96 173 9.1E-21 T 28-03-2018 IPR000249 Microcompartment protein, bacteria AM393_RS19130 b0826eba1e2df628da87c58061faf332 219 SUPERFAMILY SSF48498 85 214 2.89E-36 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AM393_RS19130 b0826eba1e2df628da87c58061faf332 219 SUPERFAMILY SSF46689 2 75 2.36E-17 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS19130 b0826eba1e2df628da87c58061faf332 219 Pfam PF09209 Domain of unknown function (DUF1956) 91 213 1.8E-38 T 28-03-2018 IPR015292 Transcription regulator YbiH, C-terminal AM393_RS19130 b0826eba1e2df628da87c58061faf332 219 Gene3D G3DSA:1.10.10.60 2 41 4.9E-14 T 28-03-2018 AM393_RS19130 b0826eba1e2df628da87c58061faf332 219 Gene3D G3DSA:1.10.357.10 58 219 5.7E-37 T 28-03-2018 AM393_RS19130 b0826eba1e2df628da87c58061faf332 219 Gene3D G3DSA:1.10.357.10 42 57 0.021 T 28-03-2018 AM393_RS19130 b0826eba1e2df628da87c58061faf332 219 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 57 1.2E-12 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM393_RS11225 0c27df06a917ecfba6fdbec10273280f 491 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 22 485 38.784 T 28-03-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 AM393_RS11225 0c27df06a917ecfba6fdbec10273280f 491 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 357 482 1.0E-22 T 28-03-2018 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 AM393_RS11225 0c27df06a917ecfba6fdbec10273280f 491 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 210 342 4.6E-28 T 28-03-2018 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 AM393_RS11225 0c27df06a917ecfba6fdbec10273280f 491 SUPERFAMILY SSF48179 210 370 2.72E-41 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AM393_RS11225 0c27df06a917ecfba6fdbec10273280f 491 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 35 368 3.3E-137 T 28-03-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 AM393_RS11225 0c27df06a917ecfba6fdbec10273280f 491 SUPERFAMILY SSF51735 29 209 5.72E-58 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS11225 0c27df06a917ecfba6fdbec10273280f 491 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 35 204 1.4E-58 T 28-03-2018 IPR013116 Acetohydroxy acid isomeroreductase, NADPH-binding domain KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 AM393_RS11225 0c27df06a917ecfba6fdbec10273280f 491 Gene3D G3DSA:3.40.50.720 1 42 5.3E-5 T 28-03-2018 AM393_RS11225 0c27df06a917ecfba6fdbec10273280f 491 Gene3D G3DSA:3.40.50.720 56 208 6.5E-52 T 28-03-2018 AM393_RS11225 0c27df06a917ecfba6fdbec10273280f 491 SUPERFAMILY SSF48179 349 484 2.38E-40 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AM393_RS11225 0c27df06a917ecfba6fdbec10273280f 491 Gene3D G3DSA:1.10.1040.10 210 487 6.0E-88 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AM393_RS06675 ebc8b3cc7082eaa78214686fbf581a42 472 Pfam PF13347 MFS/sugar transport protein 14 440 4.0E-102 T 28-03-2018 AM393_RS06675 ebc8b3cc7082eaa78214686fbf581a42 472 SUPERFAMILY SSF103473 14 422 5.75E-34 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS06675 ebc8b3cc7082eaa78214686fbf581a42 472 ProSitePatterns PS00872 Sodium:galactoside symporter family signature. 63 88 - T 28-03-2018 IPR018043 Sodium:galactoside symporter, conserved site GO:0005215|GO:0006814|GO:0016020 AM393_RS06675 ebc8b3cc7082eaa78214686fbf581a42 472 Gene3D G3DSA:1.20.1250.20 220 444 3.0E-11 T 28-03-2018 AM393_RS06675 ebc8b3cc7082eaa78214686fbf581a42 472 Gene3D G3DSA:1.20.1250.20 13 218 1.0E-18 T 28-03-2018 AM393_RS06675 ebc8b3cc7082eaa78214686fbf581a42 472 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 12 452 4.3E-122 T 28-03-2018 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 AM393_RS01670 eeaa50a8c66fd2374af93e407e352239 245 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 1 241 35.563 T 28-03-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 AM393_RS01670 eeaa50a8c66fd2374af93e407e352239 245 SUPERFAMILY SSF51366 1 243 1.01E-65 T 28-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AM393_RS01670 eeaa50a8c66fd2374af93e407e352239 245 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 2 238 1.5E-78 T 28-03-2018 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 AM393_RS01670 eeaa50a8c66fd2374af93e407e352239 245 Pfam PF00977 Histidine biosynthesis protein 1 233 2.4E-74 T 28-03-2018 IPR006062 Histidine biosynthesis GO:0000105 AM393_RS01670 eeaa50a8c66fd2374af93e407e352239 245 Gene3D G3DSA:3.20.20.70 1 245 1.9E-53 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM393_RS07800 37ed525bad37b515f3dc9e0525bf9a30 352 Gene3D G3DSA:2.40.10.10 42 148 2.0E-31 T 28-03-2018 AM393_RS07800 37ed525bad37b515f3dc9e0525bf9a30 352 TIGRFAM TIGR02038 protease_degS: periplasmic serine peptidase DegS 4 349 2.9E-169 T 28-03-2018 IPR011783 Peptidase S1C, DegS GO:0004252|GO:0006508 AM393_RS07800 37ed525bad37b515f3dc9e0525bf9a30 352 SUPERFAMILY SSF50156 237 343 4.6E-21 T 28-03-2018 IPR001478 PDZ domain GO:0005515 AM393_RS07800 37ed525bad37b515f3dc9e0525bf9a30 352 Pfam PF13180 PDZ domain 255 344 2.5E-13 T 28-03-2018 IPR001478 PDZ domain GO:0005515 AM393_RS07800 37ed525bad37b515f3dc9e0525bf9a30 352 PRINTS PR00834 HtrA/DegQ protease family signature 86 98 2.1E-48 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AM393_RS07800 37ed525bad37b515f3dc9e0525bf9a30 352 PRINTS PR00834 HtrA/DegQ protease family signature 107 127 2.1E-48 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AM393_RS07800 37ed525bad37b515f3dc9e0525bf9a30 352 PRINTS PR00834 HtrA/DegQ protease family signature 148 172 2.1E-48 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AM393_RS07800 37ed525bad37b515f3dc9e0525bf9a30 352 PRINTS PR00834 HtrA/DegQ protease family signature 294 306 2.1E-48 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AM393_RS07800 37ed525bad37b515f3dc9e0525bf9a30 352 PRINTS PR00834 HtrA/DegQ protease family signature 205 222 2.1E-48 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AM393_RS07800 37ed525bad37b515f3dc9e0525bf9a30 352 PRINTS PR00834 HtrA/DegQ protease family signature 183 200 2.1E-48 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AM393_RS07800 37ed525bad37b515f3dc9e0525bf9a30 352 SUPERFAMILY SSF50494 44 251 7.47E-61 T 28-03-2018 IPR009003 Peptidase S1, PA clan AM393_RS07800 37ed525bad37b515f3dc9e0525bf9a30 352 SMART SM00228 254 336 4.6E-13 T 28-03-2018 IPR001478 PDZ domain GO:0005515 AM393_RS07800 37ed525bad37b515f3dc9e0525bf9a30 352 Pfam PF13365 Trypsin-like peptidase domain 77 212 2.5E-30 T 28-03-2018 AM393_RS07800 37ed525bad37b515f3dc9e0525bf9a30 352 Gene3D G3DSA:2.40.10.10 149 255 7.5E-32 T 28-03-2018 AM393_RS07800 37ed525bad37b515f3dc9e0525bf9a30 352 Gene3D G3DSA:2.30.42.10 256 352 2.8E-22 T 28-03-2018 AM393_RS21445 957ac6190af9fd4c5ef476d9f1291117 441 Pfam PF04996 Succinylarginine dihydrolase 3 440 2.6E-205 T 28-03-2018 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 AM393_RS21445 957ac6190af9fd4c5ef476d9f1291117 441 Gene3D G3DSA:3.75.10.20 2 441 2.0E-212 T 28-03-2018 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 AM393_RS21445 957ac6190af9fd4c5ef476d9f1291117 441 Hamap MF_01172 N-succinylarginine dihydrolase [astB]. 1 441 56.777 T 28-03-2018 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 AM393_RS21445 957ac6190af9fd4c5ef476d9f1291117 441 TIGRFAM TIGR03241 arg_catab_astB: succinylarginine dihydrolase 4 440 1.2E-222 T 28-03-2018 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 AM393_RS21445 957ac6190af9fd4c5ef476d9f1291117 441 SUPERFAMILY SSF55909 3 441 1.9E-198 T 28-03-2018 AM393_RS16710 813dbd37811bc8bc0408b18837c700b0 216 Pfam PF08361 MAATS-type transcriptional repressor, C-terminal region 84 204 7.1E-52 T 28-03-2018 IPR013572 Transcription regulator MAATS, C-terminal GO:0003677 AM393_RS16710 813dbd37811bc8bc0408b18837c700b0 216 SUPERFAMILY SSF48498 84 200 5.34E-13 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AM393_RS16710 813dbd37811bc8bc0408b18837c700b0 216 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 62 5.7E-20 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM393_RS16710 813dbd37811bc8bc0408b18837c700b0 216 Gene3D G3DSA:1.10.357.10 1 207 5.0E-40 T 28-03-2018 AM393_RS16710 813dbd37811bc8bc0408b18837c700b0 216 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 5.1E-13 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM393_RS16710 813dbd37811bc8bc0408b18837c700b0 216 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 5.1E-13 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM393_RS16710 813dbd37811bc8bc0408b18837c700b0 216 SUPERFAMILY SSF46689 1 68 6.98E-20 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS16710 813dbd37811bc8bc0408b18837c700b0 216 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 58 - T 28-03-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AM393_RS08930 bb49e2546f0ccd8268fd6d9a49a096f2 119 Pfam PF10694 Protein of unknown function (DUF2500) 5 116 4.9E-29 T 28-03-2018 IPR019635 Protein of unknown function DUF2500 AM393_RS16350 12817cf2b0f97a053b1470fab0280bcf 158 Gene3D G3DSA:3.30.530.20 2 156 9.3E-26 T 28-03-2018 IPR023393 START-like domain AM393_RS16350 12817cf2b0f97a053b1470fab0280bcf 158 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 19 153 1.9E-29 T 28-03-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like GO:0006950 AM393_RS16350 12817cf2b0f97a053b1470fab0280bcf 158 SUPERFAMILY SSF55961 7 154 1.1E-42 T 28-03-2018 AM393_RS06560 4f86396eec9ac5bfc70f0835b20ffbf8 540 Gene3D G3DSA:1.10.10.10 157 187 1.5E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS06560 4f86396eec9ac5bfc70f0835b20ffbf8 540 Gene3D G3DSA:3.90.1530.10 28 140 1.3E-13 T 28-03-2018 AM393_RS06560 4f86396eec9ac5bfc70f0835b20ffbf8 540 SUPERFAMILY SSF110849 35 136 7.32E-9 T 28-03-2018 IPR003115 ParB/Sulfiredoxin AM393_RS06560 4f86396eec9ac5bfc70f0835b20ffbf8 540 TIGRFAM TIGR03764 ICE_PFGI_1_parB: integrating conjugative element, PFGI_1 class, ParB family protein 25 293 8.9E-100 T 28-03-2018 IPR022304 Integrating conjugative element, PFGI-1, ParB AM393_RS11080 316a31aa8d931d96a786e6921a00bb19 334 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 2 334 38.858 T 28-03-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AM393_RS11080 316a31aa8d931d96a786e6921a00bb19 334 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 3 333 2.8E-126 T 28-03-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AM393_RS11080 316a31aa8d931d96a786e6921a00bb19 334 Gene3D G3DSA:3.30.360.10 163 308 3.2E-49 T 28-03-2018 AM393_RS11080 316a31aa8d931d96a786e6921a00bb19 334 SMART SM00859 3 146 8.0E-56 T 28-03-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AM393_RS11080 316a31aa8d931d96a786e6921a00bb19 334 SUPERFAMILY SSF51735 1 172 8.02E-50 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS11080 316a31aa8d931d96a786e6921a00bb19 334 SUPERFAMILY SSF55347 154 308 5.61E-50 T 28-03-2018 AM393_RS11080 316a31aa8d931d96a786e6921a00bb19 334 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 5 146 8.4E-34 T 28-03-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AM393_RS11080 316a31aa8d931d96a786e6921a00bb19 334 Gene3D G3DSA:3.40.50.720 1 162 1.9E-44 T 28-03-2018 AM393_RS11080 316a31aa8d931d96a786e6921a00bb19 334 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 163 311 6.5E-17 T 28-03-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AM393_RS11080 316a31aa8d931d96a786e6921a00bb19 334 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 149 165 - T 28-03-2018 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AM393_RS01415 e5790e8f864c7600f36e0f83880cc3a1 529 Gene3D G3DSA:3.40.50.450 100 257 5.7E-28 T 28-03-2018 AM393_RS01415 e5790e8f864c7600f36e0f83880cc3a1 529 Pfam PF02481 DNA recombination-mediator protein A 60 248 4.3E-57 T 28-03-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 AM393_RS01415 e5790e8f864c7600f36e0f83880cc3a1 529 SUPERFAMILY SSF102405 70 246 2.27E-21 T 28-03-2018 AM393_RS12470 5660715b330ed081fe5dd960ffe1b21f 450 PRINTS PR00732 Glycosyl hydrolase family 4 signature 112 132 1.9E-39 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AM393_RS12470 5660715b330ed081fe5dd960ffe1b21f 450 PRINTS PR00732 Glycosyl hydrolase family 4 signature 167 178 1.9E-39 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AM393_RS12470 5660715b330ed081fe5dd960ffe1b21f 450 PRINTS PR00732 Glycosyl hydrolase family 4 signature 193 205 1.9E-39 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AM393_RS12470 5660715b330ed081fe5dd960ffe1b21f 450 PRINTS PR00732 Glycosyl hydrolase family 4 signature 74 90 1.9E-39 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AM393_RS12470 5660715b330ed081fe5dd960ffe1b21f 450 PRINTS PR00732 Glycosyl hydrolase family 4 signature 5 20 1.9E-39 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AM393_RS12470 5660715b330ed081fe5dd960ffe1b21f 450 PRINTS PR00732 Glycosyl hydrolase family 4 signature 96 109 1.9E-39 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AM393_RS12470 5660715b330ed081fe5dd960ffe1b21f 450 PRINTS PR00732 Glycosyl hydrolase family 4 signature 141 158 1.9E-39 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AM393_RS12470 5660715b330ed081fe5dd960ffe1b21f 450 SUPERFAMILY SSF56327 173 448 3.94E-70 T 28-03-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 AM393_RS12470 5660715b330ed081fe5dd960ffe1b21f 450 Gene3D G3DSA:3.90.1820.10 1 311 2.6E-65 T 28-03-2018 AM393_RS12470 5660715b330ed081fe5dd960ffe1b21f 450 Gene3D G3DSA:3.90.1820.10 312 450 1.5E-36 T 28-03-2018 AM393_RS12470 5660715b330ed081fe5dd960ffe1b21f 450 SUPERFAMILY SSF51735 4 170 5.2E-52 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS12470 5660715b330ed081fe5dd960ffe1b21f 450 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 197 420 1.2E-58 T 28-03-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 AM393_RS12470 5660715b330ed081fe5dd960ffe1b21f 450 Pfam PF02056 Family 4 glycosyl hydrolase 5 187 1.3E-76 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AM393_RS12470 5660715b330ed081fe5dd960ffe1b21f 450 ProSitePatterns PS01324 Glycosyl hydrolases family 4 signature. 141 172 - T 28-03-2018 IPR019802 Glycoside hydrolase, family 4, conserved site GO:0004553|GO:0005975 AM393_RS22370 e019f5c047591329f27de88e3d6ded7f 85 Pfam PF05488 PAAR motif 8 76 9.3E-17 T 28-03-2018 IPR008727 PAAR motif AM393_RS20100 d31200584ed2a5a08edcb085657540af 429 Pfam PF03222 Tryptophan/tyrosine permease family 30 333 6.4E-14 T 28-03-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 AM393_RS16035 e8f7821c78ef49bfc02a57f16dc13ec9 275 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 98 269 1.4E-23 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS16035 e8f7821c78ef49bfc02a57f16dc13ec9 275 SUPERFAMILY SSF161098 75 258 1.15E-35 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS16035 e8f7821c78ef49bfc02a57f16dc13ec9 275 Gene3D G3DSA:1.10.3720.10 23 273 5.7E-33 T 28-03-2018 AM393_RS02420 c92c3c98d7da1d72cc12a658e3490de1 443 Gene3D G3DSA:3.40.50.10140 3 291 7.4E-5 T 28-03-2018 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 AM393_RS02420 c92c3c98d7da1d72cc12a658e3490de1 443 Pfam PF13271 Domain of unknown function (DUF4062) 7 88 1.2E-25 T 28-03-2018 IPR025139 Domain of unknown function DUF4062 AM393_RS09310 4fc0b109f13a39941512b3a4ec78fb35 401 TIGRFAM TIGR00890 2A0111: oxalate/formate antiporter family transporter 9 384 1.0E-133 T 28-03-2018 IPR004741 Oxalate/formate antiporter family transporter GO:0005215|GO:0006810|GO:0016021 AM393_RS09310 4fc0b109f13a39941512b3a4ec78fb35 401 Pfam PF07690 Major Facilitator Superfamily 23 231 3.6E-18 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS09310 4fc0b109f13a39941512b3a4ec78fb35 401 SUPERFAMILY SSF103473 8 389 2.35E-47 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS09310 4fc0b109f13a39941512b3a4ec78fb35 401 Gene3D G3DSA:1.20.1250.20 210 399 2.8E-20 T 28-03-2018 AM393_RS09310 4fc0b109f13a39941512b3a4ec78fb35 401 Gene3D G3DSA:1.20.1250.20 4 199 6.1E-20 T 28-03-2018 AM393_RS10895 8ca7ab4e99d44d2d0377d91d03958aa9 276 Gene3D G3DSA:3.40.225.10 4 256 5.5E-49 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal AM393_RS10895 8ca7ab4e99d44d2d0377d91d03958aa9 276 SUPERFAMILY SSF53639 1 271 1.49E-72 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal AM393_RS10895 8ca7ab4e99d44d2d0377d91d03958aa9 276 TIGRFAM TIGR02624 rhamnu_1P_ald: rhamnulose-1-phosphate aldolase 1 272 2.2E-136 T 28-03-2018 IPR013447 Rhamnulose-1-phosphate aldolase GO:0008994|GO:0019301 KEGG: 00040+4.1.2.19|KEGG: 00051+4.1.2.19 AM393_RS10895 8ca7ab4e99d44d2d0377d91d03958aa9 276 Hamap MF_00770 Rhamnulose-1-phosphate aldolase [rhaD]. 1 272 57.956 T 28-03-2018 IPR013447 Rhamnulose-1-phosphate aldolase GO:0008994|GO:0019301 KEGG: 00040+4.1.2.19|KEGG: 00051+4.1.2.19 AM393_RS10895 8ca7ab4e99d44d2d0377d91d03958aa9 276 SMART SM01007 11 239 7.6E-31 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal AM393_RS10895 8ca7ab4e99d44d2d0377d91d03958aa9 276 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 12 238 1.5E-35 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal AM393_RS16850 45c2c44adc788cb7b7e749d3cb583dd0 208 SUPERFAMILY SSF52266 29 204 3.51E-51 T 28-03-2018 IPR013830 SGNH hydrolase-type esterase domain AM393_RS16850 45c2c44adc788cb7b7e749d3cb583dd0 208 ProSitePatterns PS01098 Lipolytic enzymes "G-D-S-L" family, serine active site. 30 40 - T 28-03-2018 IPR008265 Lipase, GDSL, active site GO:0006629|GO:0016298 Reactome: R-HSA-1482788|Reactome: R-HSA-975634 AM393_RS16850 45c2c44adc788cb7b7e749d3cb583dd0 208 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 33 187 1.8E-25 T 28-03-2018 IPR013830 SGNH hydrolase-type esterase domain AM393_RS16850 45c2c44adc788cb7b7e749d3cb583dd0 208 Gene3D G3DSA:3.40.50.1110 26 207 9.4E-38 T 28-03-2018 AM393_RS20015 bc9ebbd113df8bfaa129883e523a2366 60 SUPERFAMILY SSF158997 1 53 3.53E-19 T 28-03-2018 AM393_RS20015 bc9ebbd113df8bfaa129883e523a2366 60 Gene3D G3DSA:2.20.25.10 8 60 2.1E-17 T 28-03-2018 AM393_RS20015 bc9ebbd113df8bfaa129883e523a2366 60 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 1 54 26.044 T 28-03-2018 IPR005651 Uncharacterised protein family UPF0434/Trm112 AM393_RS20015 bc9ebbd113df8bfaa129883e523a2366 60 Pfam PF03966 Trm112p-like protein 2 41 3.6E-8 T 28-03-2018 IPR005651 Uncharacterised protein family UPF0434/Trm112 AM393_RS08500 6087ba4aae744685854efcba40a47e43 440 Pfam PF07969 Amidohydrolase family 45 405 2.6E-55 T 28-03-2018 IPR013108 Amidohydrolase 3 AM393_RS08500 6087ba4aae744685854efcba40a47e43 440 SUPERFAMILY SSF51338 8 78 2.36E-7 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM393_RS08500 6087ba4aae744685854efcba40a47e43 440 SUPERFAMILY SSF51556 57 376 2.17E-107 T 28-03-2018 IPR032466 Metal-dependent hydrolase AM393_RS08500 6087ba4aae744685854efcba40a47e43 440 Gene3D G3DSA:3.20.20.140 66 365 1.7E-49 T 28-03-2018 AM393_RS08500 6087ba4aae744685854efcba40a47e43 440 Gene3D G3DSA:2.30.40.10 2 65 2.3E-7 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM393_RS02380 46b65d0c8b67ad2051534c9674c6d23f 418 SUPERFAMILY SSF56349 105 387 1.53E-61 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AM393_RS02380 46b65d0c8b67ad2051534c9674c6d23f 418 Pfam PF13356 Arm DNA-binding domain 8 94 3.2E-16 T 28-03-2018 IPR025166 Integrase, DNA-binding domain AM393_RS02380 46b65d0c8b67ad2051534c9674c6d23f 418 Gene3D G3DSA:1.10.150.130 95 211 7.5E-21 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal AM393_RS02380 46b65d0c8b67ad2051534c9674c6d23f 418 Gene3D G3DSA:1.10.443.10 212 392 2.4E-26 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM393_RS02380 46b65d0c8b67ad2051534c9674c6d23f 418 Pfam PF00589 Phage integrase family 215 378 7.7E-25 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM393_RS18700 6d0ef05ad0c544087ac1565f255975ef 522 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 7 501 1.2E-172 T 28-03-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 AM393_RS18700 6d0ef05ad0c544087ac1565f255975ef 522 PIRSF PIRSF006446 353 521 6.6E-29 T 28-03-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 AM393_RS18700 6d0ef05ad0c544087ac1565f255975ef 522 PIRSF PIRSF006446 1 328 6.9E-113 T 28-03-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 AM393_RS17385 cd64fc1443c3aaeaead2207b1d63bea9 306 SUPERFAMILY SSF51658 8 294 9.56E-51 T 28-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AM393_RS17385 cd64fc1443c3aaeaead2207b1d63bea9 306 TIGRFAM TIGR04379 myo_inos_iolE: myo-inosose-2 dehydratase 6 293 2.6E-101 T 28-03-2018 IPR030823 IolE/MocC family KEGG: 00562+4.2.1.44 AM393_RS17385 cd64fc1443c3aaeaead2207b1d63bea9 306 Gene3D G3DSA:3.20.20.150 1 298 3.6E-54 T 28-03-2018 AM393_RS17385 cd64fc1443c3aaeaead2207b1d63bea9 306 Pfam PF01261 Xylose isomerase-like TIM barrel 33 249 7.1E-22 T 28-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AM393_RS03645 7e275a427ea6cfb58cfec8a4d436ef47 326 Pfam PF03824 High-affinity nickel-transport protein 72 317 2.6E-35 T 28-03-2018 IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 AM393_RS20260 a7cb956a9db59a4f04354bbbbb390a82 105 TIGRFAM TIGR02097 yccV: hemimethylated DNA binding domain 4 102 2.3E-34 T 28-03-2018 IPR011722 Hemimethylated DNA-binding domain GO:0003677 AM393_RS20260 a7cb956a9db59a4f04354bbbbb390a82 105 Gene3D G3DSA:2.30.30.390 1 105 9.3E-20 T 28-03-2018 IPR011722 Hemimethylated DNA-binding domain GO:0003677 AM393_RS20260 a7cb956a9db59a4f04354bbbbb390a82 105 Pfam PF08755 Hemimethylated DNA-binding protein YccV like 5 96 1.3E-20 T 28-03-2018 IPR011722 Hemimethylated DNA-binding domain GO:0003677 AM393_RS20260 a7cb956a9db59a4f04354bbbbb390a82 105 SUPERFAMILY SSF141255 4 95 4.18E-30 T 28-03-2018 IPR011722 Hemimethylated DNA-binding domain GO:0003677 AM393_RS20260 a7cb956a9db59a4f04354bbbbb390a82 105 SMART SM00992 3 102 1.1E-38 T 28-03-2018 IPR011722 Hemimethylated DNA-binding domain GO:0003677 AM393_RS20260 a7cb956a9db59a4f04354bbbbb390a82 105 Hamap MF_01194 Heat shock protein HspQ [hspQ]. 1 105 38.541 T 28-03-2018 IPR022866 Heat shock protein HspQ AM393_RS29085 323b6abaa06d647be6cb0df5a7e913c3 278 Pfam PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase 10 256 3.1E-109 T 28-03-2018 IPR006748 Aminoglycoside/hydroxyurea antibiotic resistance kinase GO:0006468|GO:0016773|GO:0019748 AM393_RS29085 323b6abaa06d647be6cb0df5a7e913c3 278 SUPERFAMILY SSF56112 12 263 3.93E-33 T 28-03-2018 IPR011009 Protein kinase-like domain AM393_RS29085 323b6abaa06d647be6cb0df5a7e913c3 278 Gene3D G3DSA:3.90.1200.10 91 267 2.4E-8 T 28-03-2018 AM393_RS25005 28fd813ad02bae5c3185a6f631ffb1c9 98 Gene3D G3DSA:1.10.260.40 27 95 1.7E-10 T 28-03-2018 AM393_RS25005 28fd813ad02bae5c3185a6f631ffb1c9 98 Pfam PF01381 Helix-turn-helix 39 76 1.7E-6 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM393_RS25005 28fd813ad02bae5c3185a6f631ffb1c9 98 SUPERFAMILY SSF47413 39 87 3.07E-9 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM393_RS25005 28fd813ad02bae5c3185a6f631ffb1c9 98 SMART SM00530 38 92 0.0012 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM393_RS17390 9ecf974cd3351152ecb3620ef1b9bb22 390 Gene3D G3DSA:3.40.50.720 2 151 1.1E-42 T 28-03-2018 AM393_RS17390 9ecf974cd3351152ecb3620ef1b9bb22 390 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 5 132 4.1E-29 T 28-03-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 AM393_RS17390 9ecf974cd3351152ecb3620ef1b9bb22 390 SUPERFAMILY SSF51735 3 164 5.7E-50 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS17390 9ecf974cd3351152ecb3620ef1b9bb22 390 SUPERFAMILY SSF55347 138 310 2.13E-34 T 28-03-2018 AM393_RS17390 9ecf974cd3351152ecb3620ef1b9bb22 390 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 144 220 1.1E-8 T 28-03-2018 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 AM393_RS17390 9ecf974cd3351152ecb3620ef1b9bb22 390 Gene3D G3DSA:3.30.360.10 152 388 2.1E-43 T 28-03-2018 AM393_RS24090 442c170e1a1297280fdbb46171eecdd5 214 PIRSF PIRSF003170 1 214 3.2E-38 T 28-03-2018 IPR026285 TenA_E protein AM393_RS24090 442c170e1a1297280fdbb46171eecdd5 214 SUPERFAMILY SSF48613 3 212 1.51E-44 T 28-03-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 AM393_RS24090 442c170e1a1297280fdbb46171eecdd5 214 Pfam PF03070 TENA/THI-4/PQQC family 10 213 8.2E-22 T 28-03-2018 IPR004305 Thiaminase-2/PQQC AM393_RS24090 442c170e1a1297280fdbb46171eecdd5 214 Gene3D G3DSA:1.20.910.10 1 214 2.6E-36 T 28-03-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 AM393_RS10490 55d7c2057c1edb0446952c72785f4d76 456 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 267 300 1.0E-7 T 28-03-2018 IPR001451 Hexapeptide repeat AM393_RS10490 55d7c2057c1edb0446952c72785f4d76 456 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 353 382 0.0029 T 28-03-2018 IPR001451 Hexapeptide repeat AM393_RS10490 55d7c2057c1edb0446952c72785f4d76 456 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 395 429 2.6E-8 T 28-03-2018 IPR001451 Hexapeptide repeat AM393_RS10490 55d7c2057c1edb0446952c72785f4d76 456 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 5 452 43.033 T 28-03-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587 AM393_RS10490 55d7c2057c1edb0446952c72785f4d76 456 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 403 431 - T 28-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AM393_RS10490 55d7c2057c1edb0446952c72785f4d76 456 Pfam PF12804 MobA-like NTP transferase domain 8 124 4.5E-20 T 28-03-2018 IPR025877 MobA-like NTP transferase AM393_RS10490 55d7c2057c1edb0446952c72785f4d76 456 SUPERFAMILY SSF51161 255 439 6.44E-53 T 28-03-2018 IPR011004 Trimeric LpxA-like AM393_RS10490 55d7c2057c1edb0446952c72785f4d76 456 Gene3D G3DSA:3.90.550.10 1 243 9.3E-53 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM393_RS10490 55d7c2057c1edb0446952c72785f4d76 456 Gene3D G3DSA:2.160.10.10 315 440 2.1E-36 T 28-03-2018 AM393_RS10490 55d7c2057c1edb0446952c72785f4d76 456 SUPERFAMILY SSF53448 6 252 9.39E-67 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM393_RS10490 55d7c2057c1edb0446952c72785f4d76 456 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 6 455 6.8E-207 T 28-03-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587 AM393_RS10490 55d7c2057c1edb0446952c72785f4d76 456 Gene3D G3DSA:2.160.10.10 244 314 4.7E-14 T 28-03-2018 AM393_RS26250 deed19108580965eb339578a53127e70 617 Pfam PF01261 Xylose isomerase-like TIM barrel 19 218 2.4E-34 T 28-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AM393_RS26250 deed19108580965eb339578a53127e70 617 Gene3D G3DSA:3.10.180.10 430 616 3.2E-30 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM393_RS26250 deed19108580965eb339578a53127e70 617 Gene3D G3DSA:3.20.20.150 5 278 1.2E-51 T 28-03-2018 AM393_RS26250 deed19108580965eb339578a53127e70 617 SUPERFAMILY SSF51658 2 271 2.76E-74 T 28-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AM393_RS26250 deed19108580965eb339578a53127e70 617 Gene3D G3DSA:3.10.180.10 286 420 2.3E-13 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM393_RS26250 deed19108580965eb339578a53127e70 617 SUPERFAMILY SSF54593 281 613 1.34E-54 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM393_RS26250 deed19108580965eb339578a53127e70 617 Pfam PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal 289 418 6.8E-28 T 28-03-2018 AM393_RS26250 deed19108580965eb339578a53127e70 617 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 433 572 3.4E-6 T 28-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AM393_RS24270 4c68e4280361298dd14bba4d51bc986e 298 SUPERFAMILY SSF46785 8 113 1.01E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS24270 4c68e4280361298dd14bba4d51bc986e 298 Gene3D G3DSA:3.40.190.10 90 176 1.6E-13 T 28-03-2018 AM393_RS24270 4c68e4280361298dd14bba4d51bc986e 298 Pfam PF03466 LysR substrate binding domain 90 291 3.1E-36 T 28-03-2018 IPR005119 LysR, substrate-binding AM393_RS24270 4c68e4280361298dd14bba4d51bc986e 298 SUPERFAMILY SSF53850 90 296 1.77E-40 T 28-03-2018 AM393_RS24270 4c68e4280361298dd14bba4d51bc986e 298 Gene3D G3DSA:3.40.190.10 177 266 5.2E-22 T 28-03-2018 AM393_RS24270 4c68e4280361298dd14bba4d51bc986e 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 5.8E-19 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS24270 4c68e4280361298dd14bba4d51bc986e 298 Gene3D G3DSA:1.10.10.10 2 86 3.5E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS12785 5111df1ba39c74fc1f1da78127d326a5 153 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 8 140 2.0E-57 T 28-03-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 AM393_RS12785 5111df1ba39c74fc1f1da78127d326a5 153 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 9 133 3.0E-42 T 28-03-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 AM393_RS12785 5111df1ba39c74fc1f1da78127d326a5 153 Gene3D G3DSA:3.40.50.300 1 153 7.3E-53 T 28-03-2018 AM393_RS12785 5111df1ba39c74fc1f1da78127d326a5 153 SUPERFAMILY SSF52540 29 149 3.96E-25 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS19360 2eeea3c10f93ee36734ee3aafff380a5 441 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 8 440 64.242 T 28-03-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 AM393_RS19360 2eeea3c10f93ee36734ee3aafff380a5 441 SUPERFAMILY SSF102114 106 371 1.96E-55 T 28-03-2018 AM393_RS19360 2eeea3c10f93ee36734ee3aafff380a5 441 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 9 438 2.7E-199 T 28-03-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 AM393_RS19360 2eeea3c10f93ee36734ee3aafff380a5 441 Gene3D G3DSA:3.80.30.20 137 379 3.4E-49 T 28-03-2018 IPR023404 Radical SAM, alpha/beta horseshoe AM393_RS19360 2eeea3c10f93ee36734ee3aafff380a5 441 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 9 438 2.8E-111 T 28-03-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 AM393_RS19360 2eeea3c10f93ee36734ee3aafff380a5 441 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 144 164 - T 28-03-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 AM393_RS19360 2eeea3c10f93ee36734ee3aafff380a5 441 Gene3D G3DSA:2.40.50.140 380 441 5.4E-22 T 28-03-2018 AM393_RS19360 2eeea3c10f93ee36734ee3aafff380a5 441 SMART SM00729 140 365 3.2E-55 T 28-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AM393_RS19360 2eeea3c10f93ee36734ee3aafff380a5 441 Pfam PF00919 Uncharacterized protein family UPF0004 9 95 2.4E-21 T 28-03-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 AM393_RS19360 2eeea3c10f93ee36734ee3aafff380a5 441 Pfam PF01938 TRAM domain 377 438 2.0E-4 T 28-03-2018 IPR002792 TRAM domain AM393_RS19360 2eeea3c10f93ee36734ee3aafff380a5 441 Pfam PF04055 Radical SAM superfamily 146 323 7.5E-31 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AM393_RS28520 8260fe9fc196aab1ffbbc03a9619dfab 109 Gene3D G3DSA:3.30.1150.10 67 109 8.7E-7 T 28-03-2018 AM393_RS28520 8260fe9fc196aab1ffbbc03a9619dfab 109 Pfam PF06519 TolA C-terminal 59 108 1.5E-10 T 28-03-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 AM393_RS28520 8260fe9fc196aab1ffbbc03a9619dfab 109 SUPERFAMILY SSF74653 62 107 1.61E-6 T 28-03-2018 AM393_RS16555 3f2f5b8ce789a522af78b97c15b57fa1 287 SUPERFAMILY SSF54637 5 114 9.34E-42 T 28-03-2018 IPR029069 HotDog domain AM393_RS16555 3f2f5b8ce789a522af78b97c15b57fa1 287 SUPERFAMILY SSF54637 116 284 4.06E-59 T 28-03-2018 IPR029069 HotDog domain AM393_RS16555 3f2f5b8ce789a522af78b97c15b57fa1 287 Gene3D G3DSA:3.10.129.10 131 286 3.1E-53 T 28-03-2018 AM393_RS16555 3f2f5b8ce789a522af78b97c15b57fa1 287 Gene3D G3DSA:3.10.129.10 2 116 2.2E-43 T 28-03-2018 AM393_RS16555 3f2f5b8ce789a522af78b97c15b57fa1 287 Pfam PF13622 Thioesterase-like superfamily 33 282 1.5E-58 T 28-03-2018 AM393_RS16555 3f2f5b8ce789a522af78b97c15b57fa1 287 TIGRFAM TIGR00189 tesB: acyl-CoA thioesterase II 12 283 1.4E-100 T 28-03-2018 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 Reactome: R-HSA-193368|Reactome: R-HSA-2046106|Reactome: R-HSA-389887|Reactome: R-HSA-390247 AM393_RS24840 896d4a349d10c1d78fb5ce3e3138a9a6 272 Gene3D G3DSA:3.40.50.300 3 263 2.8E-96 T 28-03-2018 AM393_RS24840 896d4a349d10c1d78fb5ce3e3138a9a6 272 TIGRFAM TIGR03707 PPK2_P_aer: polyphosphate kinase 2 20 242 5.5E-106 T 28-03-2018 IPR022486 Polyphosphate kinase 2, PA0141 GO:0006793|GO:0008976 AM393_RS24840 896d4a349d10c1d78fb5ce3e3138a9a6 272 SUPERFAMILY SSF52540 50 239 3.25E-30 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS24840 896d4a349d10c1d78fb5ce3e3138a9a6 272 PIRSF PIRSF028756 2 271 1.4E-114 T 28-03-2018 IPR016898 Polyphosphate kinase 2 AM393_RS24840 896d4a349d10c1d78fb5ce3e3138a9a6 272 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 19 242 1.5E-96 T 28-03-2018 IPR022488 Polyphosphate kinase-2-related AM393_RS26625 e36986bc6707ccc08da26c283afd67ac 215 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 8 206 3.8E-81 T 28-03-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 AM393_RS26625 e36986bc6707ccc08da26c283afd67ac 215 Pfam PF01914 MarC family integral membrane protein 8 210 7.9E-75 T 28-03-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 AM393_RS02885 bc958063be5a9957807a6b2b4007abec 93 Gene3D G3DSA:1.10.357.10 2 92 2.1E-4 T 28-03-2018 AM393_RS02885 bc958063be5a9957807a6b2b4007abec 93 Pfam PF08891 YfcL protein 4 87 3.9E-37 T 28-03-2018 IPR014987 Uncharacterised protein family YfcL AM393_RS02195 0e2f9eeb76e33eaf563adab40464fb8d 657 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 37 - T 28-03-2018 IPR010916 TonB box, conserved site AM393_RS02195 0e2f9eeb76e33eaf563adab40464fb8d 657 SUPERFAMILY SSF56935 514 657 2.88E-130 T 28-03-2018 AM393_RS02195 0e2f9eeb76e33eaf563adab40464fb8d 657 SUPERFAMILY SSF56935 30 483 2.88E-130 T 28-03-2018 AM393_RS02195 0e2f9eeb76e33eaf563adab40464fb8d 657 Pfam PF07715 TonB-dependent Receptor Plug Domain 43 151 2.9E-33 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM393_RS02195 0e2f9eeb76e33eaf563adab40464fb8d 657 Gene3D G3DSA:2.40.170.20 162 657 9.9E-83 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM393_RS02195 0e2f9eeb76e33eaf563adab40464fb8d 657 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 640 657 - T 28-03-2018 IPR010917 TonB-dependent receptor, conserved site AM393_RS02195 0e2f9eeb76e33eaf563adab40464fb8d 657 Gene3D G3DSA:2.170.130.10 23 158 1.0E-41 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM393_RS02195 0e2f9eeb76e33eaf563adab40464fb8d 657 Pfam PF00593 TonB dependent receptor 222 656 1.2E-62 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM393_RS16180 30a19407e186bebdc9d4bce6e1c26b1f 439 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 14 415 4.6E-162 T 28-03-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 AM393_RS16180 30a19407e186bebdc9d4bce6e1c26b1f 439 Pfam PF05525 Branched-chain amino acid transport protein 7 429 4.5E-159 T 28-03-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 AM393_RS13385 3610aabaea921a1c9a392ef193317491 337 Gene3D G3DSA:3.40.50.720 1 136 1.3E-32 T 28-03-2018 AM393_RS13385 3610aabaea921a1c9a392ef193317491 337 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 4 125 1.2E-25 T 28-03-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 AM393_RS13385 3610aabaea921a1c9a392ef193317491 337 SUPERFAMILY SSF51735 3 153 1.65E-41 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS13385 3610aabaea921a1c9a392ef193317491 337 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 137 239 4.3E-9 T 28-03-2018 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 AM393_RS13385 3610aabaea921a1c9a392ef193317491 337 SUPERFAMILY SSF55347 133 294 1.49E-14 T 28-03-2018 AM393_RS13385 3610aabaea921a1c9a392ef193317491 337 Hamap MF_01671 Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase [iolG]. 1 336 50.337 T 28-03-2018 IPR023794 Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase GO:0019310|GO:0050112|GO:0055114 KEGG: 00521+1.1.1.18|KEGG: 00562+1.1.1.18|MetaCyc: PWY-5940|MetaCyc: PWY-7237|MetaCyc: PWY-7241 AM393_RS13385 3610aabaea921a1c9a392ef193317491 337 Gene3D G3DSA:3.30.360.10 137 327 2.3E-24 T 28-03-2018 AM393_RS05210 b5dc098dccce145e65bad87af4ad25a8 379 PIRSF PIRSF026782 13 374 1.9E-130 T 28-03-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.195|MetaCyc: PWY-2201|MetaCyc: PWY-7377 AM393_RS05210 b5dc098dccce145e65bad87af4ad25a8 379 Gene3D G3DSA:3.30.2110.10 19 188 7.5E-55 T 28-03-2018 AM393_RS05210 b5dc098dccce145e65bad87af4ad25a8 379 Pfam PF01888 CbiD 17 273 6.9E-92 T 28-03-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.195|MetaCyc: PWY-2201|MetaCyc: PWY-7377 AM393_RS05210 b5dc098dccce145e65bad87af4ad25a8 379 TIGRFAM TIGR00312 cbiD: cobalamin biosynthesis protein CbiD 24 367 7.4E-86 T 28-03-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.195|MetaCyc: PWY-2201|MetaCyc: PWY-7377 AM393_RS05210 b5dc098dccce145e65bad87af4ad25a8 379 SUPERFAMILY SSF111342 6 291 1.57E-84 T 28-03-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.195|MetaCyc: PWY-2201|MetaCyc: PWY-7377 AM393_RS05210 b5dc098dccce145e65bad87af4ad25a8 379 Hamap MF_00787 Cobalt-precorrin-5B C(1)-methyltransferase [cbiD]. 17 367 30.448 T 28-03-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.195|MetaCyc: PWY-2201|MetaCyc: PWY-7377 AM393_RS13415 8137857dbabb35dcd8e9232edfbc2bdf 295 Gene3D G3DSA:1.10.3720.10 21 283 1.5E-36 T 28-03-2018 AM393_RS13415 8137857dbabb35dcd8e9232edfbc2bdf 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 110 282 2.0E-14 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS13415 8137857dbabb35dcd8e9232edfbc2bdf 295 SUPERFAMILY SSF161098 27 295 1.59E-59 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS07340 5c9ffc177961cdf9cd52a901fb9fa8e6 155 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 6 134 1.1E-23 T 28-03-2018 IPR002178 PTS EIIA type-2 domain AM393_RS07340 5c9ffc177961cdf9cd52a901fb9fa8e6 155 Gene3D G3DSA:3.40.930.10 1 140 1.0E-24 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 AM393_RS07340 5c9ffc177961cdf9cd52a901fb9fa8e6 155 SUPERFAMILY SSF55804 6 134 6.28E-27 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 AM393_RS01085 dc88584c2c09d709f2c70bcca00b6f61 448 SUPERFAMILY SSF51556 55 376 6.19E-89 T 28-03-2018 IPR032466 Metal-dependent hydrolase AM393_RS01085 dc88584c2c09d709f2c70bcca00b6f61 448 ProSitePatterns PS00483 Dihydroorotase signature 2. 311 322 - T 28-03-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM393_RS01085 dc88584c2c09d709f2c70bcca00b6f61 448 Pfam PF01979 Amidohydrolase family 51 429 1.7E-16 T 28-03-2018 IPR006680 Amidohydrolase-related GO:0016787 AM393_RS01085 dc88584c2c09d709f2c70bcca00b6f61 448 SUPERFAMILY SSF51338 2 54 2.03E-26 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM393_RS01085 dc88584c2c09d709f2c70bcca00b6f61 448 SUPERFAMILY SSF51338 375 438 2.03E-26 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM393_RS01085 dc88584c2c09d709f2c70bcca00b6f61 448 Gene3D G3DSA:2.30.40.10 3 69 9.5E-19 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM393_RS01085 dc88584c2c09d709f2c70bcca00b6f61 448 Gene3D G3DSA:3.20.20.140 70 396 1.9E-94 T 28-03-2018 AM393_RS13675 158c39d747b2201601410365648b3ffd 88 Pfam PF08681 Protein of unknown function (DUF1778) 8 86 3.9E-26 T 28-03-2018 IPR014795 Vibrio phage ICP1, Orf50 AM393_RS13675 158c39d747b2201601410365648b3ffd 88 SUPERFAMILY SSF47598 5 82 3.22E-22 T 28-03-2018 IPR010985 Ribbon-helix-helix GO:0006355 AM393_RS13675 158c39d747b2201601410365648b3ffd 88 Gene3D G3DSA:1.20.890.30 52 86 7.7E-13 T 28-03-2018 AM393_RS13675 158c39d747b2201601410365648b3ffd 88 Gene3D G3DSA:1.10.1220.10 5 48 3.8E-15 T 28-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 AM393_RS09950 d5e661e3a4232d0c3514e2dc5b45dd24 259 Pfam PF12706 Beta-lactamase superfamily domain 19 221 4.9E-11 T 28-03-2018 IPR001279 Metallo-beta-lactamase AM393_RS09950 d5e661e3a4232d0c3514e2dc5b45dd24 259 SMART SM00849 6 221 0.0081 T 28-03-2018 IPR001279 Metallo-beta-lactamase AM393_RS09950 d5e661e3a4232d0c3514e2dc5b45dd24 259 Gene3D G3DSA:3.60.15.10 1 259 1.7E-23 T 28-03-2018 IPR001279 Metallo-beta-lactamase AM393_RS09950 d5e661e3a4232d0c3514e2dc5b45dd24 259 SUPERFAMILY SSF56281 120 247 6.36E-19 T 28-03-2018 IPR001279 Metallo-beta-lactamase AM393_RS09950 d5e661e3a4232d0c3514e2dc5b45dd24 259 SUPERFAMILY SSF56281 1 84 6.36E-19 T 28-03-2018 IPR001279 Metallo-beta-lactamase AM393_RS09510 f8d70bcc526a8448d513845612dd5e79 378 SUPERFAMILY SSF111369 198 281 5.1E-15 T 28-03-2018 AM393_RS09510 f8d70bcc526a8448d513845612dd5e79 378 SUPERFAMILY SSF111369 60 165 5.1E-15 T 28-03-2018 AM393_RS09510 f8d70bcc526a8448d513845612dd5e79 378 Gene3D G3DSA:2.40.50.100 212 358 2.2E-6 T 28-03-2018 AM393_RS09510 f8d70bcc526a8448d513845612dd5e79 378 Gene3D G3DSA:2.40.50.100 63 154 1.8E-14 T 28-03-2018 AM393_RS09510 f8d70bcc526a8448d513845612dd5e79 378 Pfam PF13533 Biotin-lipoyl like 64 110 1.0E-12 T 28-03-2018 AM393_RS09510 f8d70bcc526a8448d513845612dd5e79 378 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 163 302 8.8E-8 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AM393_RS00615 12fe261f09b49606056f7b14e32d9516 115 Gene3D G3DSA:1.10.10.710 22 83 2.9E-24 T 28-03-2018 AM393_RS00615 12fe261f09b49606056f7b14e32d9516 115 Pfam PF07130 YebG protein 1 73 5.2E-32 T 28-03-2018 IPR009813 Uncharacterised protein family YebG AM393_RS24030 f787409bc1bf7b3b75ef9bdcd5b0606e 302 SUPERFAMILY SSF53850 94 297 3.08E-45 T 28-03-2018 AM393_RS24030 f787409bc1bf7b3b75ef9bdcd5b0606e 302 Pfam PF03466 LysR substrate binding domain 92 297 6.6E-44 T 28-03-2018 IPR005119 LysR, substrate-binding AM393_RS24030 f787409bc1bf7b3b75ef9bdcd5b0606e 302 SUPERFAMILY SSF46785 3 87 1.56E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS24030 f787409bc1bf7b3b75ef9bdcd5b0606e 302 Gene3D G3DSA:3.40.190.10 181 268 5.4E-26 T 28-03-2018 AM393_RS24030 f787409bc1bf7b3b75ef9bdcd5b0606e 302 Gene3D G3DSA:3.40.190.10 96 180 3.9E-10 T 28-03-2018 AM393_RS24030 f787409bc1bf7b3b75ef9bdcd5b0606e 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 67 2.9E-20 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS24030 f787409bc1bf7b3b75ef9bdcd5b0606e 302 Gene3D G3DSA:1.10.10.10 1 88 1.8E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS07165 8920ff3f813e8dd6b0f9885a695b736e 166 Pfam PF01863 Protein of unknown function DUF45 93 149 9.0E-11 T 28-03-2018 IPR002725 Protein of unknown function DUF45 AM393_RS22315 11e3a6a4b8e66efc7ab26b5c02b92576 568 PRINTS PR01021 OMPA domain signature 469 484 4.9E-7 T 28-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AM393_RS22315 11e3a6a4b8e66efc7ab26b5c02b92576 568 PRINTS PR01021 OMPA domain signature 439 461 4.9E-7 T 28-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AM393_RS22315 11e3a6a4b8e66efc7ab26b5c02b92576 568 PRINTS PR01021 OMPA domain signature 484 500 4.9E-7 T 28-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AM393_RS22315 11e3a6a4b8e66efc7ab26b5c02b92576 568 SUPERFAMILY SSF103088 412 539 3.4E-33 T 28-03-2018 IPR006665 OmpA-like domain AM393_RS22315 11e3a6a4b8e66efc7ab26b5c02b92576 568 Gene3D G3DSA:3.30.1330.60 414 557 5.8E-35 T 28-03-2018 IPR006665 OmpA-like domain AM393_RS22315 11e3a6a4b8e66efc7ab26b5c02b92576 568 Pfam PF00691 OmpA family 438 534 1.9E-16 T 28-03-2018 IPR006665 OmpA-like domain AM393_RS20890 af47fcca7aeddd91466a8f8d58a8b1e2 276 Gene3D G3DSA:3.40.50.1220 37 276 1.7E-53 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AM393_RS20890 af47fcca7aeddd91466a8f8d58a8b1e2 276 Pfam PF02146 Sir2 family 49 222 3.9E-50 T 28-03-2018 IPR003000 Sirtuin family GO:0070403 AM393_RS20890 af47fcca7aeddd91466a8f8d58a8b1e2 276 Hamap MF_01121 NAD-dependent protein deacylase [cobB]. 42 272 60.46 T 28-03-2018 IPR027546 Sirtuin, class III GO:0036054|GO:0036055|GO:0070403 Reactome: R-HSA-2151201 AM393_RS20890 af47fcca7aeddd91466a8f8d58a8b1e2 276 SUPERFAMILY SSF52467 42 271 1.03E-73 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AM393_RS14400 d457bd8257e43622e8f6296df06ee22f 134 Hamap MF_01372 UPF0412 protein YaaI [yaaI]. 1 134 44.991 T 28-03-2018 IPR020240 Uncharacterised protein family UPF0412, YaaI AM393_RS14400 d457bd8257e43622e8f6296df06ee22f 134 ProDom PD082838 YAAI PERIPLASMIC STY0011 ECS0013 PRECURSOR SIGNAL 17 134 5.0E-52 T 28-03-2018 IPR020240 Uncharacterised protein family UPF0412, YaaI AM393_RS14400 d457bd8257e43622e8f6296df06ee22f 134 Pfam PF10807 Protein of unknown function (DUF2541) 3 132 1.8E-71 T 28-03-2018 IPR020240 Uncharacterised protein family UPF0412, YaaI AM393_RS02660 d593bd29aa815b30a237d3695858f0e6 184 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 17 158 1.1E-33 T 28-03-2018 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM393_RS26100 6630eb74c0b5f9a68fa5ae5e6c5349f2 300 Gene3D G3DSA:3.40.50.10490 128 294 5.6E-23 T 28-03-2018 AM393_RS26100 6630eb74c0b5f9a68fa5ae5e6c5349f2 300 Pfam PF01380 SIS domain 140 249 9.6E-12 T 28-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AM393_RS26100 6630eb74c0b5f9a68fa5ae5e6c5349f2 300 Gene3D G3DSA:1.10.10.10 13 127 3.7E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS26100 6630eb74c0b5f9a68fa5ae5e6c5349f2 300 SUPERFAMILY SSF46689 17 88 5.73E-12 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS26100 6630eb74c0b5f9a68fa5ae5e6c5349f2 300 SUPERFAMILY SSF53697 130 270 1.36E-22 T 28-03-2018 AM393_RS26060 5a9128fbadb485fadf69d8daef5e8a48 399 Pfam PF07690 Major Facilitator Superfamily 207 372 5.3E-17 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS26060 5a9128fbadb485fadf69d8daef5e8a48 399 Gene3D G3DSA:1.20.1250.20 5 192 6.2E-13 T 28-03-2018 AM393_RS26060 5a9128fbadb485fadf69d8daef5e8a48 399 Gene3D G3DSA:1.20.1250.20 193 399 1.6E-21 T 28-03-2018 AM393_RS26060 5a9128fbadb485fadf69d8daef5e8a48 399 SUPERFAMILY SSF103473 10 380 1.83E-39 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS15955 8c85d84e1188bd842c980c61f702aef4 247 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 14 78 2.5E-13 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AM393_RS15955 8c85d84e1188bd842c980c61f702aef4 247 Gene3D G3DSA:1.10.3720.10 3 243 5.8E-30 T 28-03-2018 AM393_RS15955 8c85d84e1188bd842c980c61f702aef4 247 SUPERFAMILY SSF161098 15 223 5.23E-31 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS15955 8c85d84e1188bd842c980c61f702aef4 247 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 38 236 4.3E-11 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS21320 de884cce34dd1b79f36563ebb8b85f26 452 Gene3D G3DSA:1.20.1250.20 13 215 2.0E-29 T 28-03-2018 AM393_RS21320 de884cce34dd1b79f36563ebb8b85f26 452 Pfam PF00083 Sugar (and other) transporter 55 451 4.0E-39 T 28-03-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 AM393_RS21320 de884cce34dd1b79f36563ebb8b85f26 452 SUPERFAMILY SSF103473 7 448 1.14E-65 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS21320 de884cce34dd1b79f36563ebb8b85f26 452 Gene3D G3DSA:1.20.1250.20 239 452 1.4E-23 T 28-03-2018 AM393_RS07150 41e3e781d2077121071770b39cbf64d3 376 Hamap MF_01859 Ribosomal RNA large subunit methyltransferase G [rlmG]. 1 371 50.083 T 28-03-2018 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AM393_RS07150 41e3e781d2077121071770b39cbf64d3 376 Gene3D G3DSA:3.40.50.150 181 376 2.6E-33 T 28-03-2018 AM393_RS07150 41e3e781d2077121071770b39cbf64d3 376 SUPERFAMILY SSF53335 192 369 3.19E-25 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM393_RS07150 41e3e781d2077121071770b39cbf64d3 376 PIRSF PIRSF037565 1 372 3.7E-160 T 28-03-2018 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AM393_RS07150 41e3e781d2077121071770b39cbf64d3 376 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 300 306 - T 28-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AM393_RS07150 41e3e781d2077121071770b39cbf64d3 376 Pfam PF05175 Methyltransferase small domain 197 368 1.1E-55 T 28-03-2018 IPR007848 Methyltransferase small domain GO:0008168 AM393_RS05785 bedef4c45e835eba9c3c597eafc1e6d4 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 2.6E-22 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS05785 bedef4c45e835eba9c3c597eafc1e6d4 308 SUPERFAMILY SSF53850 90 300 7.6E-36 T 28-03-2018 AM393_RS05785 bedef4c45e835eba9c3c597eafc1e6d4 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 7.9E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS05785 bedef4c45e835eba9c3c597eafc1e6d4 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 7.9E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS05785 bedef4c45e835eba9c3c597eafc1e6d4 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 7.9E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS05785 bedef4c45e835eba9c3c597eafc1e6d4 308 Gene3D G3DSA:3.40.190.10 89 303 6.4E-17 T 28-03-2018 AM393_RS05785 bedef4c45e835eba9c3c597eafc1e6d4 308 SUPERFAMILY SSF46785 7 113 3.02E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS05785 bedef4c45e835eba9c3c597eafc1e6d4 308 Gene3D G3DSA:1.10.10.10 3 88 4.4E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS05785 bedef4c45e835eba9c3c597eafc1e6d4 308 Pfam PF03466 LysR substrate binding domain 90 295 1.0E-29 T 28-03-2018 IPR005119 LysR, substrate-binding AM393_RS27520 22b34318d6d20a1f78e31e289a9be163 120 Pfam PF06953 Arsenical resistance operon trans-acting repressor ArsD 1 115 4.2E-31 T 28-03-2018 IPR010712 Arsenical-resistance operon trans-acting repressor ArsD GO:0003677|GO:0045892|GO:0046685 AM393_RS02300 93a89091907905b040cbde114db714d7 364 SUPERFAMILY SSF161098 131 345 2.49E-14 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS02300 93a89091907905b040cbde114db714d7 364 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 152 359 5.8E-41 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS02300 93a89091907905b040cbde114db714d7 364 Gene3D G3DSA:1.10.3720.10 2 349 4.7E-36 T 28-03-2018 AM393_RS00735 4d7dc4e68f4383e96c8ccbb076726027 334 Hamap MF_01590 tRNA U34 carboxymethyltransferase [cmoB]. 12 322 55.114 T 28-03-2018 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 AM393_RS00735 4d7dc4e68f4383e96c8ccbb076726027 334 Pfam PF08003 Protein of unknown function (DUF1698) 7 322 4.0E-170 T 28-03-2018 IPR027555 tRNA (mo5U34)-methyltransferase-like AM393_RS00735 4d7dc4e68f4383e96c8ccbb076726027 334 TIGRFAM TIGR00452 TIGR00452: tRNA (mo5U34)-methyltransferase 7 321 8.3E-150 T 28-03-2018 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 AM393_RS00735 4d7dc4e68f4383e96c8ccbb076726027 334 Gene3D G3DSA:3.40.50.150 25 323 8.7E-25 T 28-03-2018 AM393_RS00735 4d7dc4e68f4383e96c8ccbb076726027 334 SUPERFAMILY SSF53335 91 323 1.96E-34 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM393_RS21615 89924e96fba959f9f86062ac033fc3f2 419 Gene3D G3DSA:3.40.50.10180 11 240 4.6E-82 T 28-03-2018 AM393_RS21615 89924e96fba959f9f86062ac033fc3f2 419 Pfam PF13660 Domain of unknown function (DUF4147) 10 230 1.4E-75 T 28-03-2018 IPR025286 MOFRL-associated domain Reactome: R-HSA-70350 AM393_RS21615 89924e96fba959f9f86062ac033fc3f2 419 SUPERFAMILY SSF82544 7 418 4.45E-137 T 28-03-2018 AM393_RS21615 89924e96fba959f9f86062ac033fc3f2 419 Gene3D G3DSA:3.40.1480.10 241 419 6.3E-61 T 28-03-2018 IPR007835 MOFRL domain Reactome: R-HSA-70350 AM393_RS21615 89924e96fba959f9f86062ac033fc3f2 419 Pfam PF05161 MOFRL family 306 412 4.6E-34 T 28-03-2018 IPR007835 MOFRL domain Reactome: R-HSA-70350 AM393_RS17365 bf3e234cfd923b20bf0e69e8c87ed9ab 715 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 362 376 - T 28-03-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 AM393_RS17365 bf3e234cfd923b20bf0e69e8c87ed9ab 715 PIRSF PIRSF009393 1 712 6.9E-286 T 28-03-2018 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 AM393_RS17365 bf3e234cfd923b20bf0e69e8c87ed9ab 715 Gene3D G3DSA:3.90.100.10 595 715 2.6E-38 T 28-03-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 AM393_RS17365 bf3e234cfd923b20bf0e69e8c87ed9ab 715 Gene3D G3DSA:3.40.640.10 130 424 1.7E-34 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM393_RS17365 bf3e234cfd923b20bf0e69e8c87ed9ab 715 SUPERFAMILY SSF53383 130 561 4.47E-105 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM393_RS17365 bf3e234cfd923b20bf0e69e8c87ed9ab 715 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 570 700 2.8E-46 T 28-03-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 AM393_RS17365 bf3e234cfd923b20bf0e69e8c87ed9ab 715 SUPERFAMILY SSF55904 567 708 3.01E-45 T 28-03-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 AM393_RS17365 bf3e234cfd923b20bf0e69e8c87ed9ab 715 Gene3D G3DSA:3.90.1150.10 425 594 2.0E-56 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM393_RS17365 bf3e234cfd923b20bf0e69e8c87ed9ab 715 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 130 545 1.1E-196 T 28-03-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 AM393_RS17365 bf3e234cfd923b20bf0e69e8c87ed9ab 715 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 14 124 3.7E-28 T 28-03-2018 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 AM393_RS04730 163fdebd046ab52bfa6905638c550977 259 Gene3D G3DSA:3.40.50.300 6 239 3.1E-55 T 28-03-2018 AM393_RS04730 163fdebd046ab52bfa6905638c550977 259 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS04730 163fdebd046ab52bfa6905638c550977 259 SMART SM00382 29 218 5.5E-13 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS04730 163fdebd046ab52bfa6905638c550977 259 SUPERFAMILY SSF52540 7 236 2.28E-56 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS04730 163fdebd046ab52bfa6905638c550977 259 Pfam PF00005 ABC transporter 21 168 4.2E-24 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS20905 15c4c39f49e0e87345dabe4e6dc47e39 574 SUPERFAMILY SSF53720 7 76 1.14E-5 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AM393_RS20905 15c4c39f49e0e87345dabe4e6dc47e39 574 Gene3D G3DSA:3.40.605.10 4 334 1.6E-44 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AM393_RS20905 15c4c39f49e0e87345dabe4e6dc47e39 574 Gene3D G3DSA:3.40.309.10 371 483 3.7E-7 T 28-03-2018 AM393_RS20905 15c4c39f49e0e87345dabe4e6dc47e39 574 SUPERFAMILY SSF53720 189 487 1.83E-25 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AM393_RS20905 15c4c39f49e0e87345dabe4e6dc47e39 574 Pfam PF00171 Aldehyde dehydrogenase family 219 333 2.8E-10 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AM393_RS14905 922b58014e0b3583fd5289c3072e1788 247 Gene3D G3DSA:1.10.3900.10 13 174 1.8E-63 T 28-03-2018 AM393_RS14905 922b58014e0b3583fd5289c3072e1788 247 SUPERFAMILY SSF160950 4 247 2.09E-91 T 28-03-2018 IPR009777 Cell division protein ZapD AM393_RS14905 922b58014e0b3583fd5289c3072e1788 247 Hamap MF_01092 Cell division protein ZapD [zapD]. 4 247 32.695 T 28-03-2018 IPR009777 Cell division protein ZapD AM393_RS14905 922b58014e0b3583fd5289c3072e1788 247 Gene3D G3DSA:2.60.440.10 175 247 2.6E-26 T 28-03-2018 IPR027462 Z ring-associated protein D, C-terminal domain AM393_RS14905 922b58014e0b3583fd5289c3072e1788 247 Pfam PF07072 Cell division protein 19 225 4.3E-79 T 28-03-2018 IPR009777 Cell division protein ZapD AM393_RS04090 056c25e3673f30efbd62c95c7a086d8d 303 Gene3D G3DSA:3.40.190.10 96 208 1.4E-15 T 28-03-2018 AM393_RS04090 056c25e3673f30efbd62c95c7a086d8d 303 SUPERFAMILY SSF46785 3 107 5.98E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS04090 056c25e3673f30efbd62c95c7a086d8d 303 Pfam PF03466 LysR substrate binding domain 93 293 2.4E-30 T 28-03-2018 IPR005119 LysR, substrate-binding AM393_RS04090 056c25e3673f30efbd62c95c7a086d8d 303 Gene3D G3DSA:1.10.10.10 2 89 1.8E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS04090 056c25e3673f30efbd62c95c7a086d8d 303 SUPERFAMILY SSF53850 94 294 6.67E-32 T 28-03-2018 AM393_RS04090 056c25e3673f30efbd62c95c7a086d8d 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 68 3.7E-17 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS29155 3a8fd64411fad1162e4c4a6f669295ab 146 Pfam PF01527 Transposase 11 60 1.7E-10 T 28-03-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 AM393_RS29155 3a8fd64411fad1162e4c4a6f669295ab 146 SUPERFAMILY SSF46689 12 63 2.15E-8 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS29155 3a8fd64411fad1162e4c4a6f669295ab 146 Gene3D G3DSA:1.10.10.10 1 64 2.5E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS10360 3ac27a6191981119c824a379869f1655 366 Gene3D G3DSA:3.10.150.10 124 247 6.0E-33 T 28-03-2018 AM393_RS10360 3ac27a6191981119c824a379869f1655 366 Gene3D G3DSA:3.10.150.10 1 123 3.9E-27 T 28-03-2018 AM393_RS10360 3ac27a6191981119c824a379869f1655 366 SUPERFAMILY SSF55979 125 244 6.77E-31 T 28-03-2018 AM393_RS10360 3ac27a6191981119c824a379869f1655 366 PIRSF PIRSF000804 1 366 1.8E-116 T 28-03-2018 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM393_RS10360 3ac27a6191981119c824a379869f1655 366 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 245 365 5.6E-45 T 28-03-2018 IPR022635 DNA polymerase III, beta chain, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM393_RS10360 3ac27a6191981119c824a379869f1655 366 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 366 6.4E-113 T 28-03-2018 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM393_RS10360 3ac27a6191981119c824a379869f1655 366 Gene3D G3DSA:3.10.150.10 248 366 5.5E-25 T 28-03-2018 AM393_RS10360 3ac27a6191981119c824a379869f1655 366 SUPERFAMILY SSF55979 1 121 3.64E-25 T 28-03-2018 AM393_RS10360 3ac27a6191981119c824a379869f1655 366 SMART SM00480 17 362 2.1E-171 T 28-03-2018 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM393_RS10360 3ac27a6191981119c824a379869f1655 366 Pfam PF02767 DNA polymerase III beta subunit, central domain 129 243 1.4E-39 T 28-03-2018 IPR022637 DNA polymerase III, beta chain, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM393_RS10360 3ac27a6191981119c824a379869f1655 366 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 120 2.6E-40 T 28-03-2018 IPR022634 DNA polymerase III, beta chain, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM393_RS10360 3ac27a6191981119c824a379869f1655 366 SUPERFAMILY SSF55979 245 366 1.91E-37 T 28-03-2018 AM393_RS13990 c425665b0ea7305b14baf70b9751991d 199 Gene3D G3DSA:3.20.20.70 1 199 1.7E-38 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM393_RS13990 c425665b0ea7305b14baf70b9751991d 199 Pfam PF01081 KDPG and KHG aldolase 2 180 9.5E-27 T 28-03-2018 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AM393_RS13990 c425665b0ea7305b14baf70b9751991d 199 SUPERFAMILY SSF51569 3 194 1.19E-53 T 28-03-2018 AM393_RS21775 8d81ca2fb3c89f401cebed8f99d37c12 385 Gene3D G3DSA:1.20.1290.10 30 190 0.0081 T 28-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AM393_RS21775 8d81ca2fb3c89f401cebed8f99d37c12 385 Gene3D G3DSA:1.20.1290.10 225 384 2.4E-14 T 28-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AM393_RS21775 8d81ca2fb3c89f401cebed8f99d37c12 385 SUPERFAMILY SSF69118 212 380 4.08E-16 T 28-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AM393_RS21775 8d81ca2fb3c89f401cebed8f99d37c12 385 SUPERFAMILY SSF69118 78 187 3.6E-8 T 28-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AM393_RS08715 d1663fe2cd434869b3fd60a536cacb5e 502 SUPERFAMILY SSF51905 312 375 2.59E-34 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS08715 d1663fe2cd434869b3fd60a536cacb5e 502 SUPERFAMILY SSF51905 3 260 2.59E-34 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS08715 d1663fe2cd434869b3fd60a536cacb5e 502 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 9 26 - T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 AM393_RS08715 d1663fe2cd434869b3fd60a536cacb5e 502 Gene3D G3DSA:3.30.9.10 83 182 5.5E-17 T 28-03-2018 AM393_RS08715 d1663fe2cd434869b3fd60a536cacb5e 502 Gene3D G3DSA:3.30.9.10 183 320 1.7E-38 T 28-03-2018 AM393_RS08715 d1663fe2cd434869b3fd60a536cacb5e 502 SUPERFAMILY SSF54373 226 319 7.06E-7 T 28-03-2018 AM393_RS08715 d1663fe2cd434869b3fd60a536cacb5e 502 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 352 362 - T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 AM393_RS08715 d1663fe2cd434869b3fd60a536cacb5e 502 Gene3D G3DSA:3.40.50.720 2 72 2.7E-4 T 28-03-2018 AM393_RS08715 d1663fe2cd434869b3fd60a536cacb5e 502 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 4 16 6.9E-28 T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 AM393_RS08715 d1663fe2cd434869b3fd60a536cacb5e 502 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 17 27 6.9E-28 T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 AM393_RS08715 d1663fe2cd434869b3fd60a536cacb5e 502 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 347 359 6.9E-28 T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 AM393_RS08715 d1663fe2cd434869b3fd60a536cacb5e 502 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 78 90 6.9E-28 T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 AM393_RS08715 d1663fe2cd434869b3fd60a536cacb5e 502 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 33 45 6.9E-28 T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 AM393_RS08715 d1663fe2cd434869b3fd60a536cacb5e 502 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 313 319 6.9E-28 T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 AM393_RS08715 d1663fe2cd434869b3fd60a536cacb5e 502 Pfam PF01266 FAD dependent oxidoreductase 5 323 6.6E-48 T 28-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AM393_RS08715 d1663fe2cd434869b3fd60a536cacb5e 502 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 381 492 1.4E-13 T 28-03-2018 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 AM393_RS00530 6395a157c93604cdd0ef5109c57e7ab8 63 Pfam PF07358 Protein of unknown function (DUF1482) 1 57 2.3E-34 T 28-03-2018 IPR009954 Protein of unknown function DUF1482 AM393_RS05555 2b6f04d693915a4c79003773e9356e7e 473 Pfam PF00083 Sugar (and other) transporter 26 460 2.9E-132 T 28-03-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 AM393_RS05555 2b6f04d693915a4c79003773e9356e7e 473 TIGRFAM TIGR00879 SP: MFS transporter, sugar porter (SP) family 8 457 7.9E-146 T 28-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 AM393_RS05555 2b6f04d693915a4c79003773e9356e7e 473 ProSitePatterns PS00217 Sugar transport proteins signature 2. 121 146 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM393_RS05555 2b6f04d693915a4c79003773e9356e7e 473 ProSitePatterns PS00216 Sugar transport proteins signature 1. 314 330 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM393_RS05555 2b6f04d693915a4c79003773e9356e7e 473 Gene3D G3DSA:1.20.1250.20 233 472 3.6E-34 T 28-03-2018 AM393_RS05555 2b6f04d693915a4c79003773e9356e7e 473 SUPERFAMILY SSF103473 12 458 8.89E-75 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS05555 2b6f04d693915a4c79003773e9356e7e 473 PRINTS PR00171 Sugar transporter signature 362 383 3.8E-20 T 28-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 AM393_RS05555 2b6f04d693915a4c79003773e9356e7e 473 PRINTS PR00171 Sugar transporter signature 269 279 3.8E-20 T 28-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 AM393_RS05555 2b6f04d693915a4c79003773e9356e7e 473 PRINTS PR00171 Sugar transporter signature 33 43 3.8E-20 T 28-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 AM393_RS05555 2b6f04d693915a4c79003773e9356e7e 473 PRINTS PR00171 Sugar transporter signature 116 135 3.8E-20 T 28-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 AM393_RS05555 2b6f04d693915a4c79003773e9356e7e 473 PRINTS PR00171 Sugar transporter signature 385 397 3.8E-20 T 28-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 AM393_RS05555 2b6f04d693915a4c79003773e9356e7e 473 Gene3D G3DSA:1.20.1250.20 13 216 2.2E-38 T 28-03-2018 AM393_RS14645 cfe51c7d27041791252262722d1f3eca 179 Pfam PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase 11 174 5.1E-56 T 28-03-2018 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase GO:0051191 AM393_RS14645 cfe51c7d27041791252262722d1f3eca 179 TIGRFAM TIGR03124 citrate_citX: holo-ACP synthase CitX 11 174 1.5E-61 T 28-03-2018 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase GO:0051191 AM393_RS12265 f4b27322ba2f05c50af8dbfca5859740 293 Gene3D G3DSA:1.10.10.10 1 83 8.9E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS12265 f4b27322ba2f05c50af8dbfca5859740 293 SUPERFAMILY SSF46785 1 86 4.86E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS12265 f4b27322ba2f05c50af8dbfca5859740 293 Pfam PF03466 LysR substrate binding domain 89 288 5.2E-43 T 28-03-2018 IPR005119 LysR, substrate-binding AM393_RS12265 f4b27322ba2f05c50af8dbfca5859740 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.2E-21 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS12265 f4b27322ba2f05c50af8dbfca5859740 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.5E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS12265 f4b27322ba2f05c50af8dbfca5859740 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.5E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS12265 f4b27322ba2f05c50af8dbfca5859740 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.5E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS12265 f4b27322ba2f05c50af8dbfca5859740 293 Gene3D G3DSA:3.40.190.10 88 176 8.7E-18 T 28-03-2018 AM393_RS12265 f4b27322ba2f05c50af8dbfca5859740 293 SUPERFAMILY SSF53850 90 286 6.39E-40 T 28-03-2018 AM393_RS12265 f4b27322ba2f05c50af8dbfca5859740 293 Gene3D G3DSA:3.40.190.10 177 264 8.6E-23 T 28-03-2018 AM393_RS26260 9d65bd8d1bbb3a3ce7319a755c5c1d9d 70 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 1 67 4.0E-26 T 28-03-2018 AM393_RS26260 9d65bd8d1bbb3a3ce7319a755c5c1d9d 70 Pfam PF10965 Protein of unknown function (DUF2767) 1 67 1.4E-34 T 28-03-2018 IPR024493 Fumarase D AM393_RS01730 7c399230ec62332b94e5cbaf68224a75 456 SUPERFAMILY SSF53738 153 261 1.45E-26 T 28-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM393_RS01730 7c399230ec62332b94e5cbaf68224a75 456 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 264 370 1.6E-23 T 28-03-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM393_RS01730 7c399230ec62332b94e5cbaf68224a75 456 Gene3D G3DSA:3.40.120.10 269 378 3.5E-27 T 28-03-2018 AM393_RS01730 7c399230ec62332b94e5cbaf68224a75 456 SUPERFAMILY SSF55957 375 455 1.17E-18 T 28-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM393_RS01730 7c399230ec62332b94e5cbaf68224a75 456 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 239 254 3.5E-31 T 28-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM393_RS01730 7c399230ec62332b94e5cbaf68224a75 456 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 210 223 3.5E-31 T 28-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM393_RS01730 7c399230ec62332b94e5cbaf68224a75 456 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 91 105 3.5E-31 T 28-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM393_RS01730 7c399230ec62332b94e5cbaf68224a75 456 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 171 190 3.5E-31 T 28-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM393_RS01730 7c399230ec62332b94e5cbaf68224a75 456 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 92 101 - T 28-03-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM393_RS01730 7c399230ec62332b94e5cbaf68224a75 456 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 153 257 8.0E-23 T 28-03-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM393_RS01730 7c399230ec62332b94e5cbaf68224a75 456 SUPERFAMILY SSF53738 264 369 1.88E-32 T 28-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM393_RS01730 7c399230ec62332b94e5cbaf68224a75 456 Gene3D G3DSA:3.40.120.10 160 268 1.0E-31 T 28-03-2018 AM393_RS01730 7c399230ec62332b94e5cbaf68224a75 456 Gene3D G3DSA:3.40.120.10 1 159 1.4E-40 T 28-03-2018 AM393_RS01730 7c399230ec62332b94e5cbaf68224a75 456 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 379 455 1.9E-10 T 28-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM393_RS01730 7c399230ec62332b94e5cbaf68224a75 456 Gene3D G3DSA:3.30.310.50 380 456 2.6E-14 T 28-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM393_RS01730 7c399230ec62332b94e5cbaf68224a75 456 SUPERFAMILY SSF53738 3 177 7.85E-40 T 28-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM393_RS01730 7c399230ec62332b94e5cbaf68224a75 456 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 7 134 1.3E-33 T 28-03-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM393_RS02635 c5153bc2b8813448e5da6aad850be399 306 SUPERFAMILY SSF56281 1 304 1.55E-87 T 28-03-2018 IPR001279 Metallo-beta-lactamase AM393_RS02635 c5153bc2b8813448e5da6aad850be399 306 Pfam PF12706 Beta-lactamase superfamily domain 36 153 1.4E-9 T 28-03-2018 IPR001279 Metallo-beta-lactamase AM393_RS02635 c5153bc2b8813448e5da6aad850be399 306 Pfam PF12706 Beta-lactamase superfamily domain 202 271 6.2E-8 T 28-03-2018 IPR001279 Metallo-beta-lactamase AM393_RS02635 c5153bc2b8813448e5da6aad850be399 306 Hamap MF_01818 Ribonuclease BN [rbn]. 1 305 40.402 T 28-03-2018 IPR013471 Ribonuclease Z/BN GO:0016891|GO:0042779 AM393_RS02635 c5153bc2b8813448e5da6aad850be399 306 Gene3D G3DSA:3.60.15.10 1 306 3.3E-59 T 28-03-2018 IPR001279 Metallo-beta-lactamase AM393_RS02635 c5153bc2b8813448e5da6aad850be399 306 TIGRFAM TIGR02651 RNase_Z: ribonuclease Z 2 304 2.5E-105 T 28-03-2018 IPR013471 Ribonuclease Z/BN GO:0016891|GO:0042779 AM393_RS08320 faddc4fc04660dbb51c88b5d2b30c6f5 201 Pfam PF00573 Ribosomal protein L4/L1 family 13 198 7.3E-64 T 28-03-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 AM393_RS08320 faddc4fc04660dbb51c88b5d2b30c6f5 201 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 13 198 7.2E-75 T 28-03-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS08320 faddc4fc04660dbb51c88b5d2b30c6f5 201 Gene3D G3DSA:3.40.1370.10 141 199 1.1E-11 T 28-03-2018 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 AM393_RS08320 faddc4fc04660dbb51c88b5d2b30c6f5 201 Gene3D G3DSA:3.40.1370.10 4 140 2.0E-47 T 28-03-2018 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 AM393_RS08320 faddc4fc04660dbb51c88b5d2b30c6f5 201 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 6 201 33.983 T 28-03-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS08320 faddc4fc04660dbb51c88b5d2b30c6f5 201 SUPERFAMILY SSF52166 10 200 1.11E-72 T 28-03-2018 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 AM393_RS24900 c291f6689bb62fab1c21c8e24050092e 96 TIGRFAM TIGR03221 muco_delta: muconolactone delta-isomerase 2 91 3.4E-44 T 28-03-2018 IPR003464 Muconolactone delta-isomerase GO:0006725 KEGG: 00362+5.3.3.4|MetaCyc: PWY-6185 AM393_RS24900 c291f6689bb62fab1c21c8e24050092e 96 ProDom PD006619 ISOMERASE MUCONOLACTONE DELTA-ISOMERASE HYDROCARBONS MIASE AROMATIC CATABOLISM METHYLMUCONOLACTONE DIRECT SEQUENCING 1 57 1.0E-18 T 28-03-2018 IPR003464 Muconolactone delta-isomerase GO:0006725 KEGG: 00362+5.3.3.4|MetaCyc: PWY-6185 AM393_RS24900 c291f6689bb62fab1c21c8e24050092e 96 PIRSF PIRSF001486 1 94 2.1E-48 T 28-03-2018 IPR003464 Muconolactone delta-isomerase GO:0006725 KEGG: 00362+5.3.3.4|MetaCyc: PWY-6185 AM393_RS24900 c291f6689bb62fab1c21c8e24050092e 96 Pfam PF02426 Muconolactone delta-isomerase 1 90 1.4E-40 T 28-03-2018 IPR026029 Muconolactone isomerase domain KEGG: 00362+5.3.3.4|MetaCyc: PWY-6185 AM393_RS24900 c291f6689bb62fab1c21c8e24050092e 96 SUPERFAMILY SSF54909 1 95 2.12E-38 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel AM393_RS07085 71013741de43c1dc2feb7f05665454c9 257 Pfam PF04954 Siderophore-interacting protein 142 256 3.3E-20 T 28-03-2018 IPR007037 Siderophore-interacting protein AM393_RS07085 71013741de43c1dc2feb7f05665454c9 257 Gene3D G3DSA:2.40.30.10 12 134 1.9E-27 T 28-03-2018 AM393_RS07085 71013741de43c1dc2feb7f05665454c9 257 Gene3D G3DSA:3.40.50.80 135 257 3.0E-22 T 28-03-2018 AM393_RS07085 71013741de43c1dc2feb7f05665454c9 257 SUPERFAMILY SSF63380 8 139 1.97E-13 T 28-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AM393_RS07085 71013741de43c1dc2feb7f05665454c9 257 Pfam PF08021 Siderophore-interacting FAD-binding domain 24 134 1.8E-30 T 28-03-2018 IPR013113 FAD-binding 9, siderophore-interacting AM393_RS23605 2745a71f174b3626771edb9ee62b9756 213 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 1 188 7.8E-55 T 28-03-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 AM393_RS23605 2745a71f174b3626771edb9ee62b9756 213 Gene3D G3DSA:1.10.1040.10 2 213 1.9E-60 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AM393_RS23605 2745a71f174b3626771edb9ee62b9756 213 SUPERFAMILY SSF48179 3 212 1.09E-51 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AM393_RS09150 b14b3f7446d44554574d8fee115ba1d7 309 SUPERFAMILY SSF53613 2 302 3.27E-73 T 28-03-2018 IPR029056 Ribokinase-like AM393_RS09150 b14b3f7446d44554574d8fee115ba1d7 309 Gene3D G3DSA:3.40.1190.20 1 309 5.4E-58 T 28-03-2018 IPR029056 Ribokinase-like AM393_RS09150 b14b3f7446d44554574d8fee115ba1d7 309 Pfam PF00294 pfkB family carbohydrate kinase 3 305 1.3E-72 T 28-03-2018 IPR011611 Carbohydrate kinase PfkB AM393_RS09150 b14b3f7446d44554574d8fee115ba1d7 309 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 258 271 - T 28-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AM393_RS02815 820b44d19f90cae0f266edc7e1546d86 194 SUPERFAMILY SSF52507 2 188 7.06E-60 T 28-03-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 AM393_RS02815 820b44d19f90cae0f266edc7e1546d86 194 Gene3D G3DSA:3.40.50.1950 2 194 2.0E-54 T 28-03-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 AM393_RS02815 820b44d19f90cae0f266edc7e1546d86 194 Pfam PF02441 Flavoprotein 2 165 1.0E-23 T 28-03-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 AM393_RS02815 820b44d19f90cae0f266edc7e1546d86 194 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 3 186 2.7E-70 T 28-03-2018 IPR004507 Flavin prenyltransferase UbiX/Pad1 AM393_RS02815 820b44d19f90cae0f266edc7e1546d86 194 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 2 188 37.114 T 28-03-2018 IPR004507 Flavin prenyltransferase UbiX/Pad1 AM393_RS06415 8c2d4cdb91f0fe61910d18919e16efed 307 Pfam PF13737 Transposase DDE domain 19 130 2.4E-45 T 28-03-2018 IPR025668 Transposase DDE domain AM393_RS28525 8c2d4cdb91f0fe61910d18919e16efed 307 Pfam PF13737 Transposase DDE domain 19 130 2.4E-45 T 28-03-2018 IPR025668 Transposase DDE domain AM393_RS24190 8c2d4cdb91f0fe61910d18919e16efed 307 Pfam PF13737 Transposase DDE domain 19 130 2.4E-45 T 28-03-2018 IPR025668 Transposase DDE domain AM393_RS26485 723e2ab20c5036c0ea425f3de46477ce 304 Pfam PF03466 LysR substrate binding domain 88 281 4.3E-23 T 28-03-2018 IPR005119 LysR, substrate-binding AM393_RS26485 723e2ab20c5036c0ea425f3de46477ce 304 Gene3D G3DSA:1.10.10.10 1 88 3.5E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS26485 723e2ab20c5036c0ea425f3de46477ce 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.7E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS26485 723e2ab20c5036c0ea425f3de46477ce 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.7E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS26485 723e2ab20c5036c0ea425f3de46477ce 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.7E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS26485 723e2ab20c5036c0ea425f3de46477ce 304 SUPERFAMILY SSF46785 1 110 2.88E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS26485 723e2ab20c5036c0ea425f3de46477ce 304 Gene3D G3DSA:3.40.190.10 89 202 5.2E-15 T 28-03-2018 AM393_RS26485 723e2ab20c5036c0ea425f3de46477ce 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 8.2E-18 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS26485 723e2ab20c5036c0ea425f3de46477ce 304 SUPERFAMILY SSF53850 89 286 6.21E-25 T 28-03-2018 AM393_RS26310 d968fd57708c0e83c1eb0f58397516a2 125 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 18 121 3.0E-32 T 28-03-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 AM393_RS26310 d968fd57708c0e83c1eb0f58397516a2 125 TIGRFAM TIGR01997 sufA_proteo: FeS assembly scaffold SufA 17 122 1.1E-44 T 28-03-2018 IPR011298 FeS assembly scaffold SufA GO:0097428 AM393_RS26310 d968fd57708c0e83c1eb0f58397516a2 125 SUPERFAMILY SSF89360 18 111 4.51E-27 T 28-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 AM393_RS26310 d968fd57708c0e83c1eb0f58397516a2 125 Pfam PF01521 Iron-sulphur cluster biosynthesis 18 118 1.5E-18 T 28-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 AM393_RS26310 d968fd57708c0e83c1eb0f58397516a2 125 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 103 120 - T 28-03-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 AM393_RS26310 d968fd57708c0e83c1eb0f58397516a2 125 Gene3D G3DSA:2.60.300.12 18 125 1.9E-32 T 28-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 AM393_RS27830 38d9e4b6e4429043cb49e5bb5debcca6 194 Gene3D G3DSA:1.10.357.10 1 194 3.1E-29 T 28-03-2018 AM393_RS27830 38d9e4b6e4429043cb49e5bb5debcca6 194 SUPERFAMILY SSF46689 3 77 3.75E-10 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS27830 38d9e4b6e4429043cb49e5bb5debcca6 194 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 57 1.2E-5 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM393_RS11775 6d048931198ecb73a394fecf14e2c7c5 631 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 147 601 56.261 T 28-03-2018 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 AM393_RS11775 6d048931198ecb73a394fecf14e2c7c5 631 Pfam PF01964 Radical SAM ThiC family 148 596 3.6E-199 T 28-03-2018 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 AM393_RS11775 6d048931198ecb73a394fecf14e2c7c5 631 Pfam PF13667 ThiC-associated domain 27 107 4.9E-34 T 28-03-2018 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 AM393_RS11775 6d048931198ecb73a394fecf14e2c7c5 631 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 147 599 2.6E-224 T 28-03-2018 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 AM393_RS27195 663d8fc49f9eeed1caa5293af6c35ad9 180 SUPERFAMILY SSF50249 4 180 3.32E-55 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM393_RS27195 663d8fc49f9eeed1caa5293af6c35ad9 180 Hamap MF_00984 Single-stranded DNA-binding protein. 6 117 37.715 T 28-03-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 AM393_RS27195 663d8fc49f9eeed1caa5293af6c35ad9 180 Gene3D G3DSA:2.40.50.140 1 120 4.0E-43 T 28-03-2018 AM393_RS27195 663d8fc49f9eeed1caa5293af6c35ad9 180 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 3 180 2.4E-54 T 28-03-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 AM393_RS27195 663d8fc49f9eeed1caa5293af6c35ad9 180 Pfam PF00436 Single-strand binding protein family 6 105 5.8E-39 T 28-03-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 AM393_RS05485 4939b60caa58bc8631d5094500934d2c 445 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 14 429 2.6E-110 T 28-03-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 AM393_RS05485 4939b60caa58bc8631d5094500934d2c 445 Pfam PF02378 Phosphotransferase system, EIIC 29 360 1.1E-44 T 28-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AM393_RS05485 4939b60caa58bc8631d5094500934d2c 445 PIRSF PIRSF006351 1 442 4.4E-134 T 28-03-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 AM393_RS13605 62d4f63107cb0bc49f2d7ee62e4189ca 240 Pfam PF07103 Protein of unknown function (DUF1365) 5 233 2.2E-71 T 28-03-2018 IPR010775 Protein of unknown function DUF1365 AM393_RS25040 668c5c28da5b556e8c5fb257be8963ed 310 SUPERFAMILY SSF53850 64 294 1.29E-42 T 28-03-2018 AM393_RS25040 668c5c28da5b556e8c5fb257be8963ed 310 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 65 292 2.5E-40 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM393_RS25040 668c5c28da5b556e8c5fb257be8963ed 310 Gene3D G3DSA:3.40.190.10 42 173 2.0E-22 T 28-03-2018 AM393_RS25040 668c5c28da5b556e8c5fb257be8963ed 310 SMART SM00062 64 295 8.4E-23 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM393_RS25040 668c5c28da5b556e8c5fb257be8963ed 310 Gene3D G3DSA:3.40.190.10 174 297 2.2E-13 T 28-03-2018 AM393_RS10040 361de175847957edfd64d8e3beab3ce5 300 SUPERFAMILY SSF53697 7 251 4.0E-72 T 28-03-2018 AM393_RS10040 361de175847957edfd64d8e3beab3ce5 300 TIGRFAM TIGR00274 TIGR00274: N-acetylmuramic acid 6-phosphate etherase 8 298 1.3E-128 T 28-03-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126 AM393_RS10040 361de175847957edfd64d8e3beab3ce5 300 Gene3D G3DSA:3.40.50.10490 12 241 6.6E-54 T 28-03-2018 AM393_RS10040 361de175847957edfd64d8e3beab3ce5 300 Pfam PF13580 SIS domain 46 163 7.2E-8 T 28-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AM393_RS10040 361de175847957edfd64d8e3beab3ce5 300 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 4 297 42.655 T 28-03-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126 AM393_RS10040 361de175847957edfd64d8e3beab3ce5 300 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 187 204 - T 28-03-2018 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126|Reactome: R-HSA-170822|Reactome: R-HSA-5619107 AM393_RS10040 361de175847957edfd64d8e3beab3ce5 300 Gene3D G3DSA:1.10.8.10 242 270 1.5E-13 T 28-03-2018 AM393_RS10040 361de175847957edfd64d8e3beab3ce5 300 Gene3D G3DSA:1.10.8.10 271 298 9.7E-4 T 28-03-2018 AM393_RS02075 dc728ac7f9170b35116b3ce49d35f76a 184 Gene3D G3DSA:3.40.630.30 9 181 2.2E-30 T 28-03-2018 AM393_RS02075 dc728ac7f9170b35116b3ce49d35f76a 184 Pfam PF13420 Acetyltransferase (GNAT) domain 14 169 2.9E-18 T 28-03-2018 AM393_RS02075 dc728ac7f9170b35116b3ce49d35f76a 184 SUPERFAMILY SSF55729 6 177 4.88E-27 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM393_RS03750 e9aeaa33dd8438e5d69dc047de4715b8 282 Gene3D G3DSA:1.10.10.10 1 77 1.8E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS03750 e9aeaa33dd8438e5d69dc047de4715b8 282 Pfam PF01380 SIS domain 128 257 7.7E-29 T 28-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AM393_RS03750 e9aeaa33dd8438e5d69dc047de4715b8 282 SUPERFAMILY SSF53697 104 279 6.68E-37 T 28-03-2018 AM393_RS03750 e9aeaa33dd8438e5d69dc047de4715b8 282 SUPERFAMILY SSF46689 1 76 4.66E-21 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS03750 e9aeaa33dd8438e5d69dc047de4715b8 282 Gene3D G3DSA:3.40.50.10490 79 275 6.3E-35 T 28-03-2018 AM393_RS03750 e9aeaa33dd8438e5d69dc047de4715b8 282 Pfam PF01418 Helix-turn-helix domain, rpiR family 1 76 2.0E-29 T 28-03-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 AM393_RS17290 3aa4ef1a4f9d7b622871992bfbbba6c6 133 PRINTS PR00189 Transthyretin signature 23 43 3.1E-10 T 28-03-2018 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 AM393_RS17290 3aa4ef1a4f9d7b622871992bfbbba6c6 133 PRINTS PR00189 Transthyretin signature 55 80 3.1E-10 T 28-03-2018 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 AM393_RS17290 3aa4ef1a4f9d7b622871992bfbbba6c6 133 PRINTS PR00189 Transthyretin signature 82 111 3.1E-10 T 28-03-2018 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 AM393_RS17290 3aa4ef1a4f9d7b622871992bfbbba6c6 133 Pfam PF00576 HIUase/Transthyretin family 24 132 4.6E-37 T 28-03-2018 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 AM393_RS17290 3aa4ef1a4f9d7b622871992bfbbba6c6 133 SUPERFAMILY SSF49472 22 133 1.83E-39 T 28-03-2018 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 AM393_RS17290 3aa4ef1a4f9d7b622871992bfbbba6c6 133 TIGRFAM TIGR02962 hdxy_isourate: hydroxyisourate hydrolase 23 133 3.1E-44 T 28-03-2018 IPR014306 Hydroxyisourate hydrolase GO:0006144|GO:0033971 KEGG: 00230+3.5.2.17|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 AM393_RS17290 3aa4ef1a4f9d7b622871992bfbbba6c6 133 SMART SM00095 19 132 0.005 T 28-03-2018 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 AM393_RS17290 3aa4ef1a4f9d7b622871992bfbbba6c6 133 Gene3D G3DSA:2.60.40.180 22 133 2.1E-40 T 28-03-2018 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 AM393_RS14710 e3a79edde6242eb7738b8be5b4804fa5 50 Pfam PF15894 Inhibitor of glucose uptake transporter SgrT 7 47 1.3E-14 T 28-03-2018 IPR031767 Inhibitor of glucose uptake transporter SgrT GO:0046325 AM393_RS09765 d3310db2d8f16f0f5f29df75979349ce 248 SUPERFAMILY SSF51621 3 247 4.19E-54 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AM393_RS09765 d3310db2d8f16f0f5f29df75979349ce 248 Pfam PF13714 Phosphoenolpyruvate phosphomutase 3 236 2.9E-70 T 28-03-2018 AM393_RS09765 d3310db2d8f16f0f5f29df75979349ce 248 Gene3D G3DSA:3.20.20.60 1 230 7.1E-48 T 28-03-2018 AM393_RS09595 bf21135df5bcb7f0212819e458ddbb69 423 Gene3D G3DSA:2.70.70.10 282 423 1.5E-33 T 28-03-2018 AM393_RS09595 bf21135df5bcb7f0212819e458ddbb69 423 Gene3D G3DSA:1.20.5.320 163 281 0.0014 T 28-03-2018 AM393_RS09595 bf21135df5bcb7f0212819e458ddbb69 423 Pfam PF01551 Peptidase family M23 324 417 1.5E-26 T 28-03-2018 IPR016047 Peptidase M23 AM393_RS09595 bf21135df5bcb7f0212819e458ddbb69 423 SUPERFAMILY SSF51261 223 421 1.94E-47 T 28-03-2018 IPR011055 Duplicated hybrid motif AM393_RS09595 bf21135df5bcb7f0212819e458ddbb69 423 Gene3D G3DSA:1.20.5.170 35 128 2.8E-4 T 28-03-2018 AM393_RS17040 4d4d5f2bb29720d164a598dc98315c8d 151 SUPERFAMILY SSF103370 17 139 6.41E-8 T 28-03-2018 IPR008711 Recombinase NinB AM393_RS17040 4d4d5f2bb29720d164a598dc98315c8d 151 ProDom PD033929 YBCN ECS1616 SIMILAR 5'REGION ORF151 RUSA LAMBDOID DLP12 BACTERIOPHAGE PROPHAGE 11 150 8.0E-48 T 28-03-2018 AM393_RS17040 4d4d5f2bb29720d164a598dc98315c8d 151 Gene3D G3DSA:1.10.3790.10 11 151 2.5E-35 T 28-03-2018 IPR008711 Recombinase NinB AM393_RS26285 2a5d02c15fafa5caaad4ee5c3e187332 138 Gene3D G3DSA:3.90.1010.10 1 137 4.8E-46 T 28-03-2018 AM393_RS26285 2a5d02c15fafa5caaad4ee5c3e187332 138 Hamap MF_01832 Cysteine desulfuration protein SufE [sufE]. 1 138 41.077 T 28-03-2018 IPR023939 Cysteine desulfuration protein SufE GO:0006790|GO:0016226 AM393_RS26285 2a5d02c15fafa5caaad4ee5c3e187332 138 Pfam PF02657 Fe-S metabolism associated domain 12 132 4.8E-41 T 28-03-2018 IPR003808 Fe-S metabolism associated domain, SufE-like AM393_RS26285 2a5d02c15fafa5caaad4ee5c3e187332 138 SUPERFAMILY SSF82649 5 136 2.04E-43 T 28-03-2018 AM393_RS17610 a67e984176a68c0a4b858ebfea0cc180 383 Gene3D G3DSA:3.40.50.720 1 142 6.5E-41 T 28-03-2018 AM393_RS17610 a67e984176a68c0a4b858ebfea0cc180 383 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 3 119 1.4E-27 T 28-03-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 AM393_RS17610 a67e984176a68c0a4b858ebfea0cc180 383 Gene3D G3DSA:3.30.360.10 143 383 8.7E-43 T 28-03-2018 AM393_RS17610 a67e984176a68c0a4b858ebfea0cc180 383 SUPERFAMILY SSF55347 128 327 1.64E-31 T 28-03-2018 AM393_RS17610 a67e984176a68c0a4b858ebfea0cc180 383 SUPERFAMILY SSF51735 2 153 5.18E-49 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS17610 a67e984176a68c0a4b858ebfea0cc180 383 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 134 264 1.3E-6 T 28-03-2018 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 AM393_RS05240 683cb9509a89f471164a59721d87a21d 94 Pfam PF00936 BMC domain 5 80 1.4E-28 T 28-03-2018 IPR000249 Microcompartment protein, bacteria AM393_RS05240 683cb9509a89f471164a59721d87a21d 94 SMART SM00877 4 80 5.2E-35 T 28-03-2018 IPR000249 Microcompartment protein, bacteria AM393_RS05240 683cb9509a89f471164a59721d87a21d 94 ProSitePatterns PS01139 Bacterial microcompartiments proteins signature. 22 41 - T 28-03-2018 IPR020808 Bacterial microcompartments protein, conserved site AM393_RS05240 683cb9509a89f471164a59721d87a21d 94 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 1 48 2.0E-19 T 28-03-2018 AM393_RS05240 683cb9509a89f471164a59721d87a21d 94 SUPERFAMILY SSF143414 4 90 5.76E-32 T 28-03-2018 AM393_RS23860 19e175b7c6d7c84c77c049aaa2cad4c8 510 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 405 492 1.7E-16 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AM393_RS23860 19e175b7c6d7c84c77c049aaa2cad4c8 510 Gene3D G3DSA:3.30.1360.60 432 506 2.4E-19 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AM393_RS23860 19e175b7c6d7c84c77c049aaa2cad4c8 510 Pfam PF00367 phosphotransferase system, EIIB 437 467 5.5E-10 T 28-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AM393_RS23860 19e175b7c6d7c84c77c049aaa2cad4c8 510 Pfam PF02378 Phosphotransferase system, EIIC 11 346 4.5E-50 T 28-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AM393_RS23860 19e175b7c6d7c84c77c049aaa2cad4c8 510 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 446 463 - T 28-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AM393_RS23860 19e175b7c6d7c84c77c049aaa2cad4c8 510 SUPERFAMILY SSF55604 436 505 2.48E-16 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AM393_RS21825 47039387318a784698f64968d35b7aa4 276 SMART SM00530 12 83 9.9E-9 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM393_RS21825 47039387318a784698f64968d35b7aa4 276 Gene3D G3DSA:1.10.260.40 1 119 9.2E-16 T 28-03-2018 AM393_RS21825 47039387318a784698f64968d35b7aa4 276 SUPERFAMILY SSF47413 6 80 1.13E-7 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM393_RS21825 47039387318a784698f64968d35b7aa4 276 Pfam PF13560 Helix-turn-helix domain 8 86 5.8E-20 T 28-03-2018 AM393_RS29080 da81481e9e9010a583019d7e5b20aefd 267 Gene3D G3DSA:3.30.200.20 10 83 9.9E-18 T 28-03-2018 AM393_RS29080 da81481e9e9010a583019d7e5b20aefd 267 Pfam PF01636 Phosphotransferase enzyme family 17 258 1.2E-29 T 28-03-2018 IPR002575 Aminoglycoside phosphotransferase AM393_RS29080 da81481e9e9010a583019d7e5b20aefd 267 PIRSF PIRSF000706 2 265 1.1E-80 T 28-03-2018 IPR024165 Aminoglycoside 3-phosphotransferase GO:0005524|GO:0016773|GO:0046677 AM393_RS29080 da81481e9e9010a583019d7e5b20aefd 267 Gene3D G3DSA:3.90.1200.10 88 265 2.4E-19 T 28-03-2018 AM393_RS29080 da81481e9e9010a583019d7e5b20aefd 267 SUPERFAMILY SSF56112 6 263 1.9E-42 T 28-03-2018 IPR011009 Protein kinase-like domain AM393_RS23260 35299c64c3993ac530306b887daa137f 113 Hamap MF_01581 UPF0482 protein YnfB [ynfB]. 2 113 27.138 T 28-03-2018 IPR009700 Protein of unknown function DUF1283 AM393_RS23260 35299c64c3993ac530306b887daa137f 113 ProDom PD073251 YNFB PERIPLASMIC SECRETED ORF9 PRECURSOR SIGNAL SIMILAR ECS2289 EXPORTED ESCHERICHIA 1 113 3.0E-41 T 28-03-2018 IPR009700 Protein of unknown function DUF1283 AM393_RS23260 35299c64c3993ac530306b887daa137f 113 Pfam PF06932 Protein of unknown function (DUF1283) 32 113 1.5E-41 T 28-03-2018 IPR009700 Protein of unknown function DUF1283 AM393_RS10680 3b5f7a25ffc3a10fa38327c6bf6d4cd5 210 Gene3D G3DSA:3.40.50.300 7 208 1.7E-27 T 28-03-2018 AM393_RS10680 3b5f7a25ffc3a10fa38327c6bf6d4cd5 210 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 10 193 5.1E-75 T 28-03-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 AM393_RS10680 3b5f7a25ffc3a10fa38327c6bf6d4cd5 210 SUPERFAMILY SSF52540 12 199 4.63E-34 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS10680 3b5f7a25ffc3a10fa38327c6bf6d4cd5 210 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 14 197 28.286 T 28-03-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 AM393_RS10680 3b5f7a25ffc3a10fa38327c6bf6d4cd5 210 Pfam PF01926 50S ribosome-binding GTPase 28 146 9.1E-20 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 AM393_RS15065 1f581ac8e5841a62c809bc58ba3548ac 220 Pfam PF00484 Carbonic anhydrase 38 187 1.8E-50 T 28-03-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AM393_RS15065 1f581ac8e5841a62c809bc58ba3548ac 220 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 42 49 - T 28-03-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AM393_RS15065 1f581ac8e5841a62c809bc58ba3548ac 220 Gene3D G3DSA:3.40.1050.10 1 220 7.4E-73 T 28-03-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AM393_RS15065 1f581ac8e5841a62c809bc58ba3548ac 220 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 82 102 - T 28-03-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AM393_RS15065 1f581ac8e5841a62c809bc58ba3548ac 220 SUPERFAMILY SSF53056 1 210 1.96E-73 T 28-03-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AM393_RS15065 1f581ac8e5841a62c809bc58ba3548ac 220 SMART SM00947 30 192 2.7E-69 T 28-03-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AM393_RS27315 daa3b3e237adcb0bdfe816bbe6ca06f4 336 Pfam PF01051 Initiator Replication protein 24 275 2.4E-30 T 28-03-2018 IPR000525 Initiator Rep protein GO:0003887|GO:0005727|GO:0006270 AM393_RS27315 daa3b3e237adcb0bdfe816bbe6ca06f4 336 Gene3D G3DSA:1.10.10.10 45 193 1.2E-4 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS00850 ff7ca836d9965e69425c4b9a85b064c3 222 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 10 182 8.2E-43 T 28-03-2018 IPR011978 Uncharacterised protein family UPF0149 AM393_RS00850 ff7ca836d9965e69425c4b9a85b064c3 222 Pfam PF03695 Uncharacterised protein family (UPF0149) 12 182 9.9E-31 T 28-03-2018 IPR011978 Uncharacterised protein family UPF0149 AM393_RS00850 ff7ca836d9965e69425c4b9a85b064c3 222 Pfam PF02810 SEC-C motif 203 220 3.9E-11 T 28-03-2018 IPR004027 SEC-C motif AM393_RS00850 ff7ca836d9965e69425c4b9a85b064c3 222 Gene3D G3DSA:3.10.450.50 16 222 9.5E-16 T 28-03-2018 AM393_RS00850 ff7ca836d9965e69425c4b9a85b064c3 222 SUPERFAMILY SSF103642 200 220 3.76E-8 T 28-03-2018 AM393_RS00850 ff7ca836d9965e69425c4b9a85b064c3 222 SUPERFAMILY SSF101327 11 179 1.44E-21 T 28-03-2018 IPR011978 Uncharacterised protein family UPF0149 AM393_RS23990 bc05e57077129f4ecf2f5663df0c2074 326 Gene3D G3DSA:1.10.10.60 236 271 9.2E-13 T 28-03-2018 AM393_RS23990 bc05e57077129f4ecf2f5663df0c2074 326 SUPERFAMILY SSF46689 271 321 8.06E-10 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS23990 bc05e57077129f4ecf2f5663df0c2074 326 Pfam PF01965 DJ-1/PfpI family 2 179 6.4E-19 T 28-03-2018 IPR002818 DJ-1/PfpI AM393_RS23990 bc05e57077129f4ecf2f5663df0c2074 326 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 271 313 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM393_RS23990 bc05e57077129f4ecf2f5663df0c2074 326 Pfam PF12833 Helix-turn-helix domain 240 319 1.4E-20 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM393_RS23990 bc05e57077129f4ecf2f5663df0c2074 326 Gene3D G3DSA:1.10.10.60 272 326 2.7E-12 T 28-03-2018 AM393_RS23990 bc05e57077129f4ecf2f5663df0c2074 326 Gene3D G3DSA:3.40.50.880 1 235 3.7E-54 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AM393_RS23990 bc05e57077129f4ecf2f5663df0c2074 326 SUPERFAMILY SSF46689 220 267 1.21E-9 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS23990 bc05e57077129f4ecf2f5663df0c2074 326 SMART SM00342 234 317 6.9E-25 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM393_RS23990 bc05e57077129f4ecf2f5663df0c2074 326 SUPERFAMILY SSF52317 1 199 8.62E-41 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AM393_RS22185 45cf0d667d73f75abbba6fc627c761cf 146 Pfam PF11681 Protein of unknown function (DUF3277) 1 144 4.6E-70 T 28-03-2018 IPR021695 Bacteriophage rv5, Orf52 AM393_RS12065 fddef2c0943d920dff7f32a3035facbf 202 Gene3D G3DSA:1.10.10.10 1 70 9.6E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS12065 fddef2c0943d920dff7f32a3035facbf 202 TIGRFAM TIGR00498 lexA: repressor LexA 1 199 1.4E-85 T 28-03-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 AM393_RS12065 fddef2c0943d920dff7f32a3035facbf 202 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 111 121 6.0E-14 T 28-03-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 AM393_RS12065 fddef2c0943d920dff7f32a3035facbf 202 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 150 162 6.0E-14 T 28-03-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 AM393_RS12065 fddef2c0943d920dff7f32a3035facbf 202 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 122 133 6.0E-14 T 28-03-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 AM393_RS12065 fddef2c0943d920dff7f32a3035facbf 202 Hamap MF_00015 LexA repressor [lexA]. 3 199 32.484 T 28-03-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 AM393_RS12065 fddef2c0943d920dff7f32a3035facbf 202 SUPERFAMILY SSF46785 3 69 1.41E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS12065 fddef2c0943d920dff7f32a3035facbf 202 Gene3D G3DSA:2.10.109.10 80 198 2.9E-26 T 28-03-2018 AM393_RS12065 fddef2c0943d920dff7f32a3035facbf 202 Pfam PF00717 Peptidase S24-like 114 179 4.4E-15 T 28-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AM393_RS12065 fddef2c0943d920dff7f32a3035facbf 202 Pfam PF01726 LexA DNA binding domain 1 65 2.8E-31 T 28-03-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 AM393_RS12065 fddef2c0943d920dff7f32a3035facbf 202 SUPERFAMILY SSF51306 75 198 4.53E-38 T 28-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AM393_RS14595 af0c1fe4ce1cc53e109f84b3ffb8d7ed 125 Hamap MF_00791 Protein ApaG [apaG]. 1 125 32.291 T 28-03-2018 IPR023065 Uncharacterised protein family ApaG AM393_RS14595 af0c1fe4ce1cc53e109f84b3ffb8d7ed 125 Gene3D G3DSA:2.60.40.1470 3 125 5.4E-42 T 28-03-2018 IPR007474 ApaG domain AM393_RS14595 af0c1fe4ce1cc53e109f84b3ffb8d7ed 125 Pfam PF04379 ApaG domain 18 102 1.0E-32 T 28-03-2018 IPR007474 ApaG domain AM393_RS14595 af0c1fe4ce1cc53e109f84b3ffb8d7ed 125 SUPERFAMILY SSF110069 4 125 8.37E-47 T 28-03-2018 IPR007474 ApaG domain AM393_RS01805 f10dbabca9ee191f6d69de001698a1b5 144 Gene3D G3DSA:3.40.50.2300 3 144 1.5E-41 T 28-03-2018 AM393_RS01805 f10dbabca9ee191f6d69de001698a1b5 144 SMART SM00226 3 141 2.0E-52 T 28-03-2018 IPR023485 Phosphotyrosine protein phosphatase I superfamily AM393_RS01805 f10dbabca9ee191f6d69de001698a1b5 144 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 5 138 3.1E-41 T 28-03-2018 IPR023485 Phosphotyrosine protein phosphatase I superfamily AM393_RS01805 f10dbabca9ee191f6d69de001698a1b5 144 SUPERFAMILY SSF52788 2 142 3.79E-41 T 28-03-2018 IPR023485 Phosphotyrosine protein phosphatase I superfamily AM393_RS01805 f10dbabca9ee191f6d69de001698a1b5 144 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 113 128 9.4E-27 T 28-03-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 AM393_RS01805 f10dbabca9ee191f6d69de001698a1b5 144 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 97 110 9.4E-27 T 28-03-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 AM393_RS01805 f10dbabca9ee191f6d69de001698a1b5 144 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 75 90 9.4E-27 T 28-03-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 AM393_RS01805 f10dbabca9ee191f6d69de001698a1b5 144 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 41 57 9.4E-27 T 28-03-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 AM393_RS01805 f10dbabca9ee191f6d69de001698a1b5 144 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 5 22 9.4E-27 T 28-03-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 AM393_RS10475 69f5f98c6b3be67a0339c0b9447d0ca1 319 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 304 1.7E-16 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS10475 69f5f98c6b3be67a0339c0b9447d0ca1 319 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 17 311 3.0E-92 T 28-03-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 AM393_RS10475 69f5f98c6b3be67a0339c0b9447d0ca1 319 SUPERFAMILY SSF161098 28 303 2.75E-32 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS10475 69f5f98c6b3be67a0339c0b9447d0ca1 319 Gene3D G3DSA:1.10.3720.10 12 306 1.4E-30 T 28-03-2018 AM393_RS28265 bf4c951b32f1b10691821f33ffa9a6f3 135 Gene3D G3DSA:1.10.10.10 1 68 3.8E-10 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS28265 bf4c951b32f1b10691821f33ffa9a6f3 135 Pfam PF01527 Transposase 9 57 1.2E-13 T 28-03-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 AM393_RS28265 bf4c951b32f1b10691821f33ffa9a6f3 135 SUPERFAMILY SSF46689 11 56 1.68E-8 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS05890 0d08556bd483a7980fe21c7f1bcf00b2 103 Gene3D G3DSA:2.30.130.30 1 103 2.8E-22 T 28-03-2018 AM393_RS05890 0d08556bd483a7980fe21c7f1bcf00b2 103 PIRSF PIRSF029143 1 103 6.9E-48 T 28-03-2018 IPR008314 Uncharacterised conserved protein UCP029143 AM393_RS05890 0d08556bd483a7980fe21c7f1bcf00b2 103 SUPERFAMILY SSF88697 2 102 7.95E-33 T 28-03-2018 IPR015947 PUA-like domain AM393_RS05890 0d08556bd483a7980fe21c7f1bcf00b2 103 SMART SM01022 6 103 1.2E-27 T 28-03-2018 IPR007374 ASCH domain AM393_RS05890 0d08556bd483a7980fe21c7f1bcf00b2 103 Pfam PF04266 ASCH domain 6 100 7.8E-15 T 28-03-2018 IPR007374 ASCH domain AM393_RS05890 0d08556bd483a7980fe21c7f1bcf00b2 103 Hamap MF_00684 UPF0267 protein YqfB [yqfB]. 2 103 30.872 T 28-03-2018 IPR008314 Uncharacterised conserved protein UCP029143 AM393_RS03465 25bfa89dd4714795d1252b2ababf0b36 749 SUPERFAMILY SSF141868 498 740 1.57E-70 T 28-03-2018 IPR001633 EAL domain AM393_RS03465 25bfa89dd4714795d1252b2ababf0b36 749 Gene3D G3DSA:3.30.70.270 313 467 2.0E-5 T 28-03-2018 AM393_RS03465 25bfa89dd4714795d1252b2ababf0b36 749 Gene3D G3DSA:3.20.20.450 494 743 4.0E-72 T 28-03-2018 IPR001633 EAL domain AM393_RS03465 25bfa89dd4714795d1252b2ababf0b36 749 SMART SM00267 319 480 6.7E-7 T 28-03-2018 IPR000160 GGDEF domain AM393_RS03465 25bfa89dd4714795d1252b2ababf0b36 749 Pfam PF00563 EAL domain 498 728 3.9E-63 T 28-03-2018 IPR001633 EAL domain AM393_RS03465 25bfa89dd4714795d1252b2ababf0b36 749 Pfam PF05231 MASE1 15 319 1.6E-37 T 28-03-2018 IPR007895 MASE1 AM393_RS03465 25bfa89dd4714795d1252b2ababf0b36 749 SMART SM00052 492 735 6.2E-90 T 28-03-2018 IPR001633 EAL domain AM393_RS26045 3ce4d2a85b7e90ea01a88e1a898e84a2 359 Gene3D G3DSA:1.20.5.460 282 309 2.9E-15 T 28-03-2018 AM393_RS26045 3ce4d2a85b7e90ea01a88e1a898e84a2 359 Gene3D G3DSA:1.10.1530.10 5 77 3.9E-22 T 28-03-2018 AM393_RS26045 3ce4d2a85b7e90ea01a88e1a898e84a2 359 Gene3D G3DSA:3.30.1370.60 78 280 1.3E-75 T 28-03-2018 AM393_RS26045 3ce4d2a85b7e90ea01a88e1a898e84a2 359 SUPERFAMILY SSF89733 9 347 9.81E-99 T 28-03-2018 IPR003767 Malate/L-lactate dehydrogenase-like GO:0008152|GO:0016491|GO:0055114 AM393_RS26045 3ce4d2a85b7e90ea01a88e1a898e84a2 359 Pfam PF02615 Malate/L-lactate dehydrogenase 10 338 1.8E-108 T 28-03-2018 IPR003767 Malate/L-lactate dehydrogenase-like GO:0008152|GO:0016491|GO:0055114 AM393_RS25055 76d078d9b0c1071d42875fc09b73ffc1 335 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 5 325 4.0E-104 T 28-03-2018 IPR019949 Luciferase family oxidoreductase, group 1 AM393_RS25055 76d078d9b0c1071d42875fc09b73ffc1 335 Gene3D G3DSA:3.20.20.30 3 326 1.3E-58 T 28-03-2018 AM393_RS25055 76d078d9b0c1071d42875fc09b73ffc1 335 Pfam PF00296 Luciferase-like monooxygenase 17 296 1.1E-28 T 28-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AM393_RS25055 76d078d9b0c1071d42875fc09b73ffc1 335 SUPERFAMILY SSF51679 4 324 7.07E-62 T 28-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AM393_RS03610 6ccd479443d0065954a3ab342d8d4fee 107 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 3 107 1.0E-37 T 28-03-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 AM393_RS03610 6ccd479443d0065954a3ab342d8d4fee 107 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 88 105 - T 28-03-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 AM393_RS03610 6ccd479443d0065954a3ab342d8d4fee 107 SUPERFAMILY SSF89360 1 96 2.75E-32 T 28-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 AM393_RS03610 6ccd479443d0065954a3ab342d8d4fee 107 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 103 3.5E-26 T 28-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 AM393_RS03610 6ccd479443d0065954a3ab342d8d4fee 107 Hamap MF_01429 Iron-binding protein IscA [iscA]. 1 107 44.216 T 28-03-2018 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0051536|GO:0097428 AM393_RS03610 6ccd479443d0065954a3ab342d8d4fee 107 Gene3D G3DSA:2.60.300.12 2 107 7.9E-38 T 28-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 AM393_RS03610 6ccd479443d0065954a3ab342d8d4fee 107 TIGRFAM TIGR02011 IscA: iron-sulfur cluster assembly protein IscA 3 107 1.1E-60 T 28-03-2018 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0051536|GO:0097428 AM393_RS26545 e043603bb3b22b1117fe8da8fb089d21 252 Pfam PF04338 Protein of unknown function, DUF481 47 251 1.1E-55 T 28-03-2018 IPR007433 Protein of unknown function DUF481 AM393_RS13745 7100acc5056156839e899aa6a613e2f6 323 Pfam PF02653 Branched-chain amino acid transport system / permease component 39 307 1.3E-39 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AM393_RS13745 7100acc5056156839e899aa6a613e2f6 323 Gene3D G3DSA:1.10.3470.10 31 314 9.7E-23 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AM393_RS16315 9a6e634821819b1789b3ba2aa62277a9 323 PIRSF PIRSF005303 1 322 4.4E-84 T 28-03-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 AM393_RS16315 9a6e634821819b1789b3ba2aa62277a9 323 Gene3D G3DSA:3.90.650.10 145 322 2.4E-47 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain AM393_RS16315 9a6e634821819b1789b3ba2aa62277a9 323 SUPERFAMILY SSF55326 4 138 5.68E-32 T 28-03-2018 IPR016188 PurM-like, N-terminal domain AM393_RS16315 9a6e634821819b1789b3ba2aa62277a9 323 Pfam PF00586 AIR synthase related protein, N-terminal domain 29 138 3.3E-20 T 28-03-2018 IPR016188 PurM-like, N-terminal domain AM393_RS16315 9a6e634821819b1789b3ba2aa62277a9 323 Gene3D G3DSA:3.30.1330.10 1 141 2.6E-32 T 28-03-2018 IPR016188 PurM-like, N-terminal domain AM393_RS16315 9a6e634821819b1789b3ba2aa62277a9 323 Pfam PF02769 AIR synthase related protein, C-terminal domain 150 297 1.6E-9 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain AM393_RS16315 9a6e634821819b1789b3ba2aa62277a9 323 SUPERFAMILY SSF56042 143 308 7.63E-40 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain AM393_RS16315 9a6e634821819b1789b3ba2aa62277a9 323 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 4 322 1.4E-113 T 28-03-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 AM393_RS16315 9a6e634821819b1789b3ba2aa62277a9 323 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 3 319 31.517 T 28-03-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 AM393_RS25395 86a090d92ae22ea973d576720fab7cc0 192 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 1 190 1.1E-84 T 28-03-2018 IPR010207 Electron transport complex, RnfB/RsxB GO:0009055|GO:0051536 AM393_RS25395 86a090d92ae22ea973d576720fab7cc0 192 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 147 158 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM393_RS25395 86a090d92ae22ea973d576720fab7cc0 192 Gene3D G3DSA:3.30.70.20 148 180 1.8E-5 T 28-03-2018 AM393_RS25395 86a090d92ae22ea973d576720fab7cc0 192 PIRSF PIRSF005784 3 191 8.4E-83 T 28-03-2018 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 AM393_RS25395 86a090d92ae22ea973d576720fab7cc0 192 Gene3D G3DSA:3.30.70.20 127 147 2.3E-11 T 28-03-2018 AM393_RS25395 86a090d92ae22ea973d576720fab7cc0 192 Hamap MF_00463 Electron transport complex subunit RsxB [rsxB]. 4 185 42.797 T 28-03-2018 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 AM393_RS25395 86a090d92ae22ea973d576720fab7cc0 192 Pfam PF04060 Putative Fe-S cluster 44 76 3.6E-12 T 28-03-2018 IPR007202 4Fe-4S domain GO:0051536 AM393_RS25395 86a090d92ae22ea973d576720fab7cc0 192 Pfam PF14697 4Fe-4S dicluster domain 110 163 2.5E-16 T 28-03-2018 AM393_RS25395 86a090d92ae22ea973d576720fab7cc0 192 SUPERFAMILY SSF54862 38 176 9.52E-29 T 28-03-2018 AM393_RS25395 86a090d92ae22ea973d576720fab7cc0 192 Gene3D G3DSA:3.30.70.20 24 126 3.3E-11 T 28-03-2018 AM393_RS15185 3a203ab82e40d9f8bd254a08f676af13 404 TIGRFAM TIGR02120 GspF: type II secretion system protein F 4 401 1.7E-151 T 28-03-2018 IPR011850 General secretion pathway protein F GO:0008565|GO:0015627|GO:0015628 AM393_RS15185 3a203ab82e40d9f8bd254a08f676af13 404 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 164 192 - T 28-03-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 AM393_RS15185 3a203ab82e40d9f8bd254a08f676af13 404 PRINTS PR00812 Bacterial general secretion pathway protein F signature 383 402 1.1E-41 T 28-03-2018 IPR003004 GspF/PilC family AM393_RS15185 3a203ab82e40d9f8bd254a08f676af13 404 PRINTS PR00812 Bacterial general secretion pathway protein F signature 65 77 1.1E-41 T 28-03-2018 IPR003004 GspF/PilC family AM393_RS15185 3a203ab82e40d9f8bd254a08f676af13 404 PRINTS PR00812 Bacterial general secretion pathway protein F signature 164 192 1.1E-41 T 28-03-2018 IPR003004 GspF/PilC family AM393_RS15185 3a203ab82e40d9f8bd254a08f676af13 404 PRINTS PR00812 Bacterial general secretion pathway protein F signature 367 381 1.1E-41 T 28-03-2018 IPR003004 GspF/PilC family AM393_RS15185 3a203ab82e40d9f8bd254a08f676af13 404 Pfam PF00482 Type II secretion system (T2SS), protein F 70 192 4.9E-32 T 28-03-2018 IPR018076 Type II secretion system F domain AM393_RS15185 3a203ab82e40d9f8bd254a08f676af13 404 Pfam PF00482 Type II secretion system (T2SS), protein F 273 393 2.5E-24 T 28-03-2018 IPR018076 Type II secretion system F domain AM393_RS05670 cf92392503e44f7d4fc7f1c26d85e8b9 201 Pfam PF00589 Phage integrase family 12 180 9.8E-49 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM393_RS05670 cf92392503e44f7d4fc7f1c26d85e8b9 201 SUPERFAMILY SSF56349 9 187 1.03E-42 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AM393_RS05670 cf92392503e44f7d4fc7f1c26d85e8b9 201 Gene3D G3DSA:1.10.443.10 11 183 3.2E-38 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM393_RS10770 3aa35edb8407f7c5c96159d20a3a417a 211 Gene3D G3DSA:1.20.950.20 1 211 4.6E-54 T 28-03-2018 AM393_RS10770 3aa35edb8407f7c5c96159d20a3a417a 211 Pfam PF01292 Prokaryotic cytochrome b561 9 184 1.2E-22 T 28-03-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 AM393_RS10770 3aa35edb8407f7c5c96159d20a3a417a 211 SUPERFAMILY SSF81342 4 206 3.0E-55 T 28-03-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 AM393_RS10770 3aa35edb8407f7c5c96159d20a3a417a 211 TIGRFAM TIGR01583 formate-DH-gamm: formate dehydrogenase, gamma subunit 7 205 5.7E-67 T 28-03-2018 IPR006471 Formate dehydrogenase, gamma subunit GO:0008863|GO:0009326|GO:0016021|GO:0045333 AM393_RS24370 ac961686ddfed8c73d17dabb17bd2560 136 SMART SM01022 17 134 1.2E-43 T 28-03-2018 IPR007374 ASCH domain AM393_RS24370 ac961686ddfed8c73d17dabb17bd2560 136 PIRSF PIRSF021320 1 136 3.4E-45 T 28-03-2018 IPR009326 Protein of unknown function DUF984 AM393_RS24370 ac961686ddfed8c73d17dabb17bd2560 136 SUPERFAMILY SSF88697 6 134 2.36E-44 T 28-03-2018 IPR015947 PUA-like domain AM393_RS24370 ac961686ddfed8c73d17dabb17bd2560 136 Gene3D G3DSA:3.10.400.10 2 136 5.6E-51 T 28-03-2018 AM393_RS24370 ac961686ddfed8c73d17dabb17bd2560 136 Pfam PF04266 ASCH domain 26 134 7.6E-24 T 28-03-2018 IPR007374 ASCH domain AM393_RS12335 ddf6c38541b97dc4ff9dfddc577bd563 228 SUPERFAMILY SSF81901 24 100 1.57E-10 T 28-03-2018 AM393_RS12335 ddf6c38541b97dc4ff9dfddc577bd563 228 SMART SM00671 178 215 0.0099 T 28-03-2018 IPR006597 Sel1-like repeat AM393_RS12335 ddf6c38541b97dc4ff9dfddc577bd563 228 SMART SM00671 66 100 92.0 T 28-03-2018 IPR006597 Sel1-like repeat AM393_RS12335 ddf6c38541b97dc4ff9dfddc577bd563 228 SMART SM00671 141 176 0.27 T 28-03-2018 IPR006597 Sel1-like repeat AM393_RS12335 ddf6c38541b97dc4ff9dfddc577bd563 228 SMART SM00671 34 65 0.95 T 28-03-2018 IPR006597 Sel1-like repeat AM393_RS12335 ddf6c38541b97dc4ff9dfddc577bd563 228 Pfam PF08238 Sel1 repeat 142 169 5.4 T 28-03-2018 IPR006597 Sel1-like repeat AM393_RS12335 ddf6c38541b97dc4ff9dfddc577bd563 228 Pfam PF08238 Sel1 repeat 36 65 5.3E-4 T 28-03-2018 IPR006597 Sel1-like repeat AM393_RS12335 ddf6c38541b97dc4ff9dfddc577bd563 228 Pfam PF08238 Sel1 repeat 179 208 0.0013 T 28-03-2018 IPR006597 Sel1-like repeat AM393_RS12335 ddf6c38541b97dc4ff9dfddc577bd563 228 Pfam PF08238 Sel1 repeat 83 100 16.0 T 28-03-2018 IPR006597 Sel1-like repeat AM393_RS12335 ddf6c38541b97dc4ff9dfddc577bd563 228 Gene3D G3DSA:2.60.40.1180 175 220 0.039 T 28-03-2018 AM393_RS12335 ddf6c38541b97dc4ff9dfddc577bd563 228 SUPERFAMILY SSF81901 82 213 4.19E-14 T 28-03-2018 AM393_RS12335 ddf6c38541b97dc4ff9dfddc577bd563 228 Gene3D G3DSA:1.25.40.10 18 156 7.7E-16 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM393_RS08945 2a3d900678d26d0451fe0f16d25930c1 81 Gene3D G3DSA:3.30.110.40 4 81 1.1E-29 T 28-03-2018 IPR001455 TusA-like domain AM393_RS08945 2a3d900678d26d0451fe0f16d25930c1 81 SUPERFAMILY SSF64307 4 79 2.62E-27 T 28-03-2018 IPR001455 TusA-like domain AM393_RS08945 2a3d900678d26d0451fe0f16d25930c1 81 Hamap MF_00413 Sulfurtransferase TusA [tusA]. 3 81 29.538 T 28-03-2018 IPR022931 Sulfur carrier protein TusA GO:0002143|GO:0097163 AM393_RS08945 2a3d900678d26d0451fe0f16d25930c1 81 Pfam PF01206 Sulfurtransferase TusA 10 79 9.1E-26 T 28-03-2018 IPR001455 TusA-like domain AM393_RS08945 2a3d900678d26d0451fe0f16d25930c1 81 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 12 36 - T 28-03-2018 IPR001455 TusA-like domain AM393_RS18175 f151c7eebd9b6c7979714d003cae69bb 516 Pfam PF00005 ABC transporter 286 440 5.9E-17 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS18175 f151c7eebd9b6c7979714d003cae69bb 516 Pfam PF00005 ABC transporter 30 182 7.4E-26 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS18175 f151c7eebd9b6c7979714d003cae69bb 516 ProSitePatterns PS00211 ABC transporters family signature. 413 427 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS18175 f151c7eebd9b6c7979714d003cae69bb 516 SUPERFAMILY SSF52540 282 497 8.58E-41 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS18175 f151c7eebd9b6c7979714d003cae69bb 516 SUPERFAMILY SSF52540 17 245 9.18E-50 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS18175 f151c7eebd9b6c7979714d003cae69bb 516 SMART SM00382 39 236 1.5E-6 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS18175 f151c7eebd9b6c7979714d003cae69bb 516 SMART SM00382 295 488 2.5 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS18175 f151c7eebd9b6c7979714d003cae69bb 516 Gene3D G3DSA:3.40.50.300 13 270 9.7E-46 T 28-03-2018 AM393_RS18175 f151c7eebd9b6c7979714d003cae69bb 516 Gene3D G3DSA:3.40.50.300 272 501 9.5E-35 T 28-03-2018 AM393_RS23610 0da58976735248bcc648a807b3ce6a38 148 SUPERFAMILY SSF55729 3 132 6.98E-29 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM393_RS23610 0da58976735248bcc648a807b3ce6a38 148 Gene3D G3DSA:3.40.630.30 2 140 4.8E-30 T 28-03-2018 AM393_RS23610 0da58976735248bcc648a807b3ce6a38 148 Pfam PF00583 Acetyltransferase (GNAT) family 38 131 2.1E-12 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AM393_RS09230 d3e2b3d0da646ddb93685cdb09b3040a 811 Pfam PF03170 Bacterial cellulose synthase subunit 104 709 7.0E-191 T 28-03-2018 IPR018513 Cellulose synthase BcsB, bacterial GO:0006011|GO:0016020 AM393_RS09230 d3e2b3d0da646ddb93685cdb09b3040a 811 PRINTS PR01440 Cellulose synthase subunit B signature 259 282 1.4E-28 T 28-03-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 AM393_RS09230 d3e2b3d0da646ddb93685cdb09b3040a 811 PRINTS PR01440 Cellulose synthase subunit B signature 750 770 1.4E-28 T 28-03-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 AM393_RS09230 d3e2b3d0da646ddb93685cdb09b3040a 811 PRINTS PR01440 Cellulose synthase subunit B signature 502 521 1.4E-28 T 28-03-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 AM393_RS09230 d3e2b3d0da646ddb93685cdb09b3040a 811 PRINTS PR01440 Cellulose synthase subunit B signature 550 569 1.4E-28 T 28-03-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 AM393_RS09230 d3e2b3d0da646ddb93685cdb09b3040a 811 PRINTS PR01440 Cellulose synthase subunit B signature 421 442 1.4E-28 T 28-03-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 AM393_RS09230 d3e2b3d0da646ddb93685cdb09b3040a 811 PRINTS PR01440 Cellulose synthase subunit B signature 128 149 1.4E-28 T 28-03-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 AM393_RS09230 d3e2b3d0da646ddb93685cdb09b3040a 811 PRINTS PR01440 Cellulose synthase subunit B signature 176 199 1.4E-28 T 28-03-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 AM393_RS02335 4a3524a1509695004126ab2e5fb0ab5e 94 Pfam PF01386 Ribosomal L25p family 4 91 2.6E-24 T 28-03-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 AM393_RS02335 4a3524a1509695004126ab2e5fb0ab5e 94 SUPERFAMILY SSF50715 1 93 9.77E-31 T 28-03-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AM393_RS02335 4a3524a1509695004126ab2e5fb0ab5e 94 Gene3D G3DSA:2.40.240.10 1 94 3.4E-31 T 28-03-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AM393_RS02335 4a3524a1509695004126ab2e5fb0ab5e 94 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 2 94 28.319 T 28-03-2018 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 AM393_RS02335 4a3524a1509695004126ab2e5fb0ab5e 94 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 6 93 2.0E-34 T 28-03-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 AM393_RS04645 8059031e231185c18b329eca716749cd 440 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 16 427 1.9E-114 T 28-03-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 AM393_RS04645 8059031e231185c18b329eca716749cd 440 PIRSF PIRSF006351 5 438 1.8E-139 T 28-03-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 AM393_RS04645 8059031e231185c18b329eca716749cd 440 Pfam PF02378 Phosphotransferase system, EIIC 33 352 1.7E-53 T 28-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AM393_RS24645 b1c5fc0c342eed84a646dc953a7e880f 293 SUPERFAMILY SSF46785 1 81 1.69E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS24645 b1c5fc0c342eed84a646dc953a7e880f 293 SUPERFAMILY SSF53850 88 288 3.44E-28 T 28-03-2018 AM393_RS24645 b1c5fc0c342eed84a646dc953a7e880f 293 Gene3D G3DSA:1.10.10.10 1 86 1.9E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS24645 b1c5fc0c342eed84a646dc953a7e880f 293 Gene3D G3DSA:3.40.190.10 179 262 7.3E-10 T 28-03-2018 AM393_RS24645 b1c5fc0c342eed84a646dc953a7e880f 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 7.9E-16 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS24645 b1c5fc0c342eed84a646dc953a7e880f 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.3E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS24645 b1c5fc0c342eed84a646dc953a7e880f 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.3E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS24645 b1c5fc0c342eed84a646dc953a7e880f 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.3E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS24645 b1c5fc0c342eed84a646dc953a7e880f 293 Gene3D G3DSA:3.40.190.10 91 178 9.7E-9 T 28-03-2018 AM393_RS24645 b1c5fc0c342eed84a646dc953a7e880f 293 Pfam PF03466 LysR substrate binding domain 88 284 5.1E-27 T 28-03-2018 IPR005119 LysR, substrate-binding AM393_RS06060 94db04599e2f0db1314de4a92d4a9785 256 SUPERFAMILY SSF53474 4 245 2.32E-43 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AM393_RS06060 94db04599e2f0db1314de4a92d4a9785 256 PRINTS PR00111 Alpha/beta hydrolase fold signature 34 49 3.1E-11 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM393_RS06060 94db04599e2f0db1314de4a92d4a9785 256 PRINTS PR00111 Alpha/beta hydrolase fold signature 93 106 3.1E-11 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM393_RS06060 94db04599e2f0db1314de4a92d4a9785 256 PRINTS PR00111 Alpha/beta hydrolase fold signature 79 92 3.1E-11 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM393_RS06060 94db04599e2f0db1314de4a92d4a9785 256 Pfam PF00561 alpha/beta hydrolase fold 12 123 1.1E-17 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM393_RS06060 94db04599e2f0db1314de4a92d4a9785 256 Gene3D G3DSA:3.40.50.1820 3 249 7.9E-32 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AM393_RS20700 6eea75a36bed6bec992bedd38a3fc41a 511 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 2 508 3.1E-172 T 28-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AM393_RS20700 6eea75a36bed6bec992bedd38a3fc41a 511 Pfam PF03023 MviN-like protein 28 478 1.4E-158 T 28-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AM393_RS20700 6eea75a36bed6bec992bedd38a3fc41a 511 PIRSF PIRSF002869 1 511 4.1E-182 T 28-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AM393_RS20700 6eea75a36bed6bec992bedd38a3fc41a 511 PRINTS PR01806 Virulence factor MviN signature 33 52 1.5E-87 T 28-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AM393_RS20700 6eea75a36bed6bec992bedd38a3fc41a 511 PRINTS PR01806 Virulence factor MviN signature 357 376 1.5E-87 T 28-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AM393_RS20700 6eea75a36bed6bec992bedd38a3fc41a 511 PRINTS PR01806 Virulence factor MviN signature 409 426 1.5E-87 T 28-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AM393_RS20700 6eea75a36bed6bec992bedd38a3fc41a 511 PRINTS PR01806 Virulence factor MviN signature 52 68 1.5E-87 T 28-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AM393_RS20700 6eea75a36bed6bec992bedd38a3fc41a 511 PRINTS PR01806 Virulence factor MviN signature 259 285 1.5E-87 T 28-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AM393_RS20700 6eea75a36bed6bec992bedd38a3fc41a 511 PRINTS PR01806 Virulence factor MviN signature 133 157 1.5E-87 T 28-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AM393_RS20700 6eea75a36bed6bec992bedd38a3fc41a 511 PRINTS PR01806 Virulence factor MviN signature 157 178 1.5E-87 T 28-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AM393_RS20700 6eea75a36bed6bec992bedd38a3fc41a 511 Hamap MF_02078 Probable lipid II flippase MurJ [murJ]. 3 467 20.599 T 28-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AM393_RS26405 bf7da2445a5a6919e704bc3390231c60 136 Pfam PF03061 Thioesterase superfamily 50 127 2.2E-15 T 28-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AM393_RS26405 bf7da2445a5a6919e704bc3390231c60 136 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 20 135 4.7E-45 T 28-03-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 AM393_RS26405 bf7da2445a5a6919e704bc3390231c60 136 Gene3D G3DSA:3.10.129.10 1 136 3.7E-28 T 28-03-2018 AM393_RS26405 bf7da2445a5a6919e704bc3390231c60 136 Hamap MF_01936 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [menI]. 1 136 46.172 T 28-03-2018 IPR030863 1,4-dihydroxy-2-naphthoyl-CoA hydrolase, MenI GO:0009234|GO:0061522 KEGG: 00130+3.1.2.28|MetaCyc: PWY-5837 AM393_RS26405 bf7da2445a5a6919e704bc3390231c60 136 SUPERFAMILY SSF54637 1 133 2.34E-28 T 28-03-2018 IPR029069 HotDog domain AM393_RS04360 a17e058f0f0c56e0caf2f9af088813c9 104 SMART SM00749 42 104 2.4E-8 T 28-03-2018 IPR014004 Transport-associated and nodulation domain, bacteria AM393_RS04360 a17e058f0f0c56e0caf2f9af088813c9 104 Pfam PF04972 BON domain 37 104 4.3E-17 T 28-03-2018 IPR007055 BON domain AM393_RS17205 474353f071634e104c4a6c1601c980b0 261 SMART SM01040 19 109 1.1E-21 T 28-03-2018 IPR003497 BRO N-terminal domain AM393_RS17205 474353f071634e104c4a6c1601c980b0 261 Pfam PF02498 BRO family, N-terminal domain 25 109 3.5E-16 T 28-03-2018 IPR003497 BRO N-terminal domain AM393_RS11115 da948c79f72aa049d9df35d215587dc2 211 Hamap MF_01190 HTH-type transcriptional repressor FabR [fabR]. 2 210 52.645 T 28-03-2018 IPR023764 Transcriptional repressor HTH, FabR AM393_RS11115 da948c79f72aa049d9df35d215587dc2 211 Pfam PF00440 Bacterial regulatory proteins, tetR family 23 59 3.1E-8 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM393_RS11115 da948c79f72aa049d9df35d215587dc2 211 Gene3D G3DSA:1.10.357.10 3 199 7.6E-27 T 28-03-2018 AM393_RS11115 da948c79f72aa049d9df35d215587dc2 211 SUPERFAMILY SSF46689 2 78 5.67E-13 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS02210 bf1c5a20c07b3913ae36e29da49ad8a0 288 Gene3D G3DSA:1.10.10.10 1 84 5.8E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS02210 bf1c5a20c07b3913ae36e29da49ad8a0 288 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 1.6E-16 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS02210 bf1c5a20c07b3913ae36e29da49ad8a0 288 Gene3D G3DSA:3.40.190.10 88 176 7.4E-23 T 28-03-2018 AM393_RS02210 bf1c5a20c07b3913ae36e29da49ad8a0 288 Gene3D G3DSA:3.40.190.10 177 261 6.9E-19 T 28-03-2018 AM393_RS02210 bf1c5a20c07b3913ae36e29da49ad8a0 288 SUPERFAMILY SSF46785 2 109 5.99E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS02210 bf1c5a20c07b3913ae36e29da49ad8a0 288 Pfam PF03466 LysR substrate binding domain 86 286 2.2E-49 T 28-03-2018 IPR005119 LysR, substrate-binding AM393_RS02210 bf1c5a20c07b3913ae36e29da49ad8a0 288 SUPERFAMILY SSF53850 87 286 4.89E-46 T 28-03-2018 AM393_RS02210 bf1c5a20c07b3913ae36e29da49ad8a0 288 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 2.0E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS02210 bf1c5a20c07b3913ae36e29da49ad8a0 288 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 2.0E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS02210 bf1c5a20c07b3913ae36e29da49ad8a0 288 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 2.0E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS17015 ea32edea96ac5273846fcd8828ee6706 97 SUPERFAMILY SSF46785 6 78 9.85E-6 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS17015 ea32edea96ac5273846fcd8828ee6706 97 Gene3D G3DSA:1.10.10.10 2 72 1.3E-8 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS02720 386379f55757b0dfcb4ce8cc0a8c0b0f 199 Pfam PF13023 HD domain 11 156 2.9E-17 T 28-03-2018 IPR006674 HD domain AM393_RS02720 386379f55757b0dfcb4ce8cc0a8c0b0f 199 ProDom PD353566 UPF0207 HYDROLASE HD PHOSPHOHYDROLASE METAL-DEPENDENT SUBDOMAIN YFBR PHOSPHOHYDROLASE NUCLEOTIDE-BINDING NUCLEOSIDE 80 172 2.0E-43 T 28-03-2018 AM393_RS02720 386379f55757b0dfcb4ce8cc0a8c0b0f 199 Gene3D G3DSA:1.10.3210.10 1 199 4.1E-54 T 28-03-2018 AM393_RS02720 386379f55757b0dfcb4ce8cc0a8c0b0f 199 SMART SM00471 26 151 1.4E-7 T 28-03-2018 IPR003607 HD/PDEase domain AM393_RS02720 386379f55757b0dfcb4ce8cc0a8c0b0f 199 SUPERFAMILY SSF109604 3 185 7.42E-45 T 28-03-2018 AM393_RS02720 386379f55757b0dfcb4ce8cc0a8c0b0f 199 Hamap MF_01100 5'-deoxynucleotidase YfbR [yfbR]. 3 195 43.96 T 28-03-2018 IPR022971 5'-deoxynucleotidase YfbR KEGG: 00240+3.1.3.89 AM393_RS20325 a09a52db5dbcf52812d45c9963c96521 482 SUPERFAMILY SSF53720 6 481 6.15E-171 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AM393_RS20325 a09a52db5dbcf52812d45c9963c96521 482 Pfam PF00171 Aldehyde dehydrogenase family 19 477 1.2E-171 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AM393_RS20325 a09a52db5dbcf52812d45c9963c96521 482 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 282 293 - T 28-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 AM393_RS20325 a09a52db5dbcf52812d45c9963c96521 482 Gene3D G3DSA:3.40.605.10 6 272 9.5E-100 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AM393_RS20325 a09a52db5dbcf52812d45c9963c96521 482 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 30 476 8.4E-209 T 28-03-2018 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 Reactome: R-HSA-916853 AM393_RS20325 a09a52db5dbcf52812d45c9963c96521 482 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 254 261 - T 28-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 AM393_RS20325 a09a52db5dbcf52812d45c9963c96521 482 Gene3D G3DSA:3.40.309.10 273 464 3.6E-73 T 28-03-2018 AM393_RS22360 197054739f9fcadfb1e25fc1428ade6f 176 Pfam PF11745 Protein of unknown function (DUF3304) 30 148 5.7E-34 T 28-03-2018 IPR021733 Protein of unknown function DUF3304 AM393_RS22720 b6ae996d0f527a56acb47ac7d639205d 136 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 30 106 4.1E-9 T 28-03-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 AM393_RS22720 b6ae996d0f527a56acb47ac7d639205d 136 SUPERFAMILY SSF51316 2 123 2.62E-32 T 28-03-2018 IPR011057 Mss4-like AM393_RS22720 b6ae996d0f527a56acb47ac7d639205d 136 Gene3D G3DSA:3.90.1590.10 2 119 1.3E-20 T 28-03-2018 AM393_RS26190 a68766fd2c05776ecfda1428e3100d40 316 Hamap MF_01657 Acetaldehyde dehydrogenase [mhpF]. 1 316 145.673 T 28-03-2018 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 AM393_RS26190 a68766fd2c05776ecfda1428e3100d40 316 Gene3D G3DSA:3.40.50.720 1 145 3.2E-14 T 28-03-2018 AM393_RS26190 a68766fd2c05776ecfda1428e3100d40 316 SUPERFAMILY SSF55347 131 284 3.6E-66 T 28-03-2018 AM393_RS26190 a68766fd2c05776ecfda1428e3100d40 316 PIRSF PIRSF015689 1 315 7.4E-132 T 28-03-2018 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 AM393_RS26190 a68766fd2c05776ecfda1428e3100d40 316 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 5 118 4.6E-13 T 28-03-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AM393_RS26190 a68766fd2c05776ecfda1428e3100d40 316 TIGRFAM TIGR03215 ac_ald_DH_ac: acetaldehyde dehydrogenase (acetylating) 3 308 1.8E-139 T 28-03-2018 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 AM393_RS26190 a68766fd2c05776ecfda1428e3100d40 316 Gene3D G3DSA:3.30.360.10 146 284 3.2E-67 T 28-03-2018 AM393_RS26190 a68766fd2c05776ecfda1428e3100d40 316 Pfam PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation 131 284 6.9E-63 T 28-03-2018 IPR015426 Acetaldehyde dehydrogenase, C-terminal GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 AM393_RS26190 a68766fd2c05776ecfda1428e3100d40 316 SUPERFAMILY SSF51735 1 155 1.01E-29 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS26190 a68766fd2c05776ecfda1428e3100d40 316 SMART SM00859 5 123 3.2E-14 T 28-03-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AM393_RS16045 486bf06eff578396c90a958f22da4d73 572 Gene3D G3DSA:3.40.1130.10 26 276 2.4E-33 T 28-03-2018 AM393_RS16045 486bf06eff578396c90a958f22da4d73 572 SUPERFAMILY SSF69593 40 262 7.98E-14 T 28-03-2018 AM393_RS16045 486bf06eff578396c90a958f22da4d73 572 Pfam PF01553 Acyltransferase 65 191 1.4E-11 T 28-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AM393_RS16045 486bf06eff578396c90a958f22da4d73 572 Pfam PF13444 Acetyltransferase (GNAT) domain 322 422 3.7E-23 T 28-03-2018 AM393_RS16045 486bf06eff578396c90a958f22da4d73 572 Gene3D G3DSA:3.40.630.30 301 486 8.7E-25 T 28-03-2018 AM393_RS16045 486bf06eff578396c90a958f22da4d73 572 SUPERFAMILY SSF55729 310 481 3.03E-25 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM393_RS16045 486bf06eff578396c90a958f22da4d73 572 SMART SM00563 77 194 3.8E-9 T 28-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AM393_RS00835 c4c1b240275498dc24ed203042cd866c 165 SUPERFAMILY SSF47240 4 160 3.13E-55 T 28-03-2018 IPR009078 Ferritin-like superfamily AM393_RS00835 c4c1b240275498dc24ed203042cd866c 165 Pfam PF00210 Ferritin-like domain 7 142 2.5E-35 T 28-03-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 AM393_RS00835 c4c1b240275498dc24ed203042cd866c 165 Gene3D G3DSA:1.20.1260.10 1 161 1.4E-40 T 28-03-2018 IPR012347 Ferritin-related AM393_RS24580 26a6fdc28e9d1692654954b2690fc4e9 310 Gene3D G3DSA:3.40.190.10 182 269 1.4E-22 T 28-03-2018 AM393_RS24580 26a6fdc28e9d1692654954b2690fc4e9 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 68 1.7E-17 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS24580 26a6fdc28e9d1692654954b2690fc4e9 310 Pfam PF03466 LysR substrate binding domain 93 301 4.6E-34 T 28-03-2018 IPR005119 LysR, substrate-binding AM393_RS24580 26a6fdc28e9d1692654954b2690fc4e9 310 SUPERFAMILY SSF53850 95 306 1.81E-35 T 28-03-2018 AM393_RS24580 26a6fdc28e9d1692654954b2690fc4e9 310 SUPERFAMILY SSF46785 8 91 1.43E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS24580 26a6fdc28e9d1692654954b2690fc4e9 310 Gene3D G3DSA:3.40.190.10 96 181 2.4E-9 T 28-03-2018 AM393_RS24580 26a6fdc28e9d1692654954b2690fc4e9 310 Gene3D G3DSA:1.10.10.10 2 89 1.9E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS23675 85bb66886095ec16bdad632db5975532 385 Pfam PF06779 Uncharacterised MFS-type transporter YbfB 19 379 6.0E-78 T 28-03-2018 IPR010645 Uncharacterised MFS-type transporter YbfB AM393_RS23675 85bb66886095ec16bdad632db5975532 385 Gene3D G3DSA:1.20.1250.20 4 197 4.8E-8 T 28-03-2018 AM393_RS23675 85bb66886095ec16bdad632db5975532 385 Gene3D G3DSA:1.20.1250.20 207 381 6.2E-12 T 28-03-2018 AM393_RS23675 85bb66886095ec16bdad632db5975532 385 SUPERFAMILY SSF103473 1 380 2.62E-24 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS04605 ec5745da5a21462527e36837fc93d299 336 Gene3D G3DSA:3.90.650.10 161 323 2.2E-34 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain AM393_RS04605 ec5745da5a21462527e36837fc93d299 336 Pfam PF02769 AIR synthase related protein, C-terminal domain 166 312 5.3E-25 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain AM393_RS04605 ec5745da5a21462527e36837fc93d299 336 Gene3D G3DSA:3.30.1330.10 1 156 3.4E-23 T 28-03-2018 IPR016188 PurM-like, N-terminal domain AM393_RS04605 ec5745da5a21462527e36837fc93d299 336 PIRSF PIRSF005644 1 336 2.1E-120 T 28-03-2018 IPR011854 Hydrogenase expression/formation protein HypE AM393_RS04605 ec5745da5a21462527e36837fc93d299 336 TIGRFAM TIGR02124 hypE: hydrogenase expression/formation protein HypE 4 336 2.1E-136 T 28-03-2018 IPR011854 Hydrogenase expression/formation protein HypE AM393_RS04605 ec5745da5a21462527e36837fc93d299 336 SUPERFAMILY SSF55326 3 156 5.23E-34 T 28-03-2018 IPR016188 PurM-like, N-terminal domain AM393_RS04605 ec5745da5a21462527e36837fc93d299 336 SUPERFAMILY SSF56042 163 331 5.08E-39 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain AM393_RS04605 ec5745da5a21462527e36837fc93d299 336 Pfam PF00586 AIR synthase related protein, N-terminal domain 48 152 2.9E-16 T 28-03-2018 IPR016188 PurM-like, N-terminal domain AM393_RS25705 1f2baac23aee618c6e0ec6668cf9dc6e 162 SUPERFAMILY SSF109854 9 155 1.68E-24 T 28-03-2018 IPR034660 DinB/YfiT-like putative metalloenzymes AM393_RS25705 1f2baac23aee618c6e0ec6668cf9dc6e 162 Gene3D G3DSA:1.20.120.450 3 162 1.1E-15 T 28-03-2018 AM393_RS25705 1f2baac23aee618c6e0ec6668cf9dc6e 162 Pfam PF05163 DinB family 3 150 1.3E-11 T 28-03-2018 IPR007837 DNA damage-inducible protein DinB AM393_RS02490 55ba0e76e5e8376a76594a59cf821686 946 Pfam PF09456 RcsC Alpha-Beta-Loop (ABL) 707 797 1.3E-33 T 28-03-2018 IPR019017 Signal transduction histidine kinase RcsC, alpha-beta loop, C-terminal GO:0000160|GO:0004673|GO:0004871|GO:0005524|GO:0005886|GO:0006355|GO:0016021|GO:0018106 AM393_RS02490 55ba0e76e5e8376a76594a59cf821686 946 PRINTS PR00344 Bacterial sensor protein C-terminal signature 633 643 9.2E-18 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM393_RS02490 55ba0e76e5e8376a76594a59cf821686 946 PRINTS PR00344 Bacterial sensor protein C-terminal signature 650 668 9.2E-18 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM393_RS02490 55ba0e76e5e8376a76594a59cf821686 946 PRINTS PR00344 Bacterial sensor protein C-terminal signature 674 687 9.2E-18 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM393_RS02490 55ba0e76e5e8376a76594a59cf821686 946 PRINTS PR00344 Bacterial sensor protein C-terminal signature 615 629 9.2E-18 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM393_RS02490 55ba0e76e5e8376a76594a59cf821686 946 Gene3D G3DSA:3.40.50.2300 816 946 8.5E-41 T 28-03-2018 AM393_RS02490 55ba0e76e5e8376a76594a59cf821686 946 SMART SM00387 579 690 2.4E-38 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS02490 55ba0e76e5e8376a76594a59cf821686 946 SUPERFAMILY SSF55874 521 692 7.33E-47 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS02490 55ba0e76e5e8376a76594a59cf821686 946 SMART SM00448 823 934 8.0E-38 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM393_RS02490 55ba0e76e5e8376a76594a59cf821686 946 Gene3D G3DSA:1.10.287.130 471 526 6.3E-19 T 28-03-2018 AM393_RS02490 55ba0e76e5e8376a76594a59cf821686 946 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 579 688 5.7E-29 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS02490 55ba0e76e5e8376a76594a59cf821686 946 SUPERFAMILY SSF52172 822 942 5.83E-39 T 28-03-2018 IPR011006 CheY-like superfamily AM393_RS02490 55ba0e76e5e8376a76594a59cf821686 946 Pfam PF00512 His Kinase A (phospho-acceptor) domain 467 531 6.2E-16 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM393_RS02490 55ba0e76e5e8376a76594a59cf821686 946 Gene3D G3DSA:3.30.450.20 208 470 7.6E-7 T 28-03-2018 AM393_RS02490 55ba0e76e5e8376a76594a59cf821686 946 Gene3D G3DSA:3.30.565.10 527 690 1.5E-46 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS02490 55ba0e76e5e8376a76594a59cf821686 946 Hamap MF_00979 Sensor histidine kinase RcsC [rcsC]. 24 939 26.675 T 28-03-2018 IPR030856 Sensor histidine kinase RcsC GO:0000155|GO:0000160|GO:0016021|GO:0042710 AM393_RS02490 55ba0e76e5e8376a76594a59cf821686 946 Pfam PF00072 Response regulator receiver domain 825 934 3.3E-29 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM393_RS02490 55ba0e76e5e8376a76594a59cf821686 946 SUPERFAMILY SSF52172 699 813 2.15E-40 T 28-03-2018 IPR011006 CheY-like superfamily AM393_RS02490 55ba0e76e5e8376a76594a59cf821686 946 SUPERFAMILY SSF47384 451 533 2.35E-19 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM393_RS02490 55ba0e76e5e8376a76594a59cf821686 946 SMART SM00388 467 532 4.5E-19 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM393_RS07280 c0d798922cb789f973b3302e61e4bcf3 381 Gene3D G3DSA:3.90.1510.10 42 276 3.7E-97 T 28-03-2018 IPR018193 Glycerate kinase, flavodoxin-like domain GO:0008887|GO:0031388 AM393_RS07280 c0d798922cb789f973b3302e61e4bcf3 381 PIRSF PIRSF006078 1 377 1.7E-141 T 28-03-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 AM393_RS07280 c0d798922cb789f973b3302e61e4bcf3 381 Pfam PF02595 Glycerate kinase family 3 373 5.4E-149 T 28-03-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 AM393_RS07280 c0d798922cb789f973b3302e61e4bcf3 381 SUPERFAMILY SSF110738 1 375 1.57E-142 T 28-03-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 AM393_RS07280 c0d798922cb789f973b3302e61e4bcf3 381 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 2 375 3.6E-171 T 28-03-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 AM393_RS07500 793052b6773887eead91bbd455325659 150 Pfam PF02576 RimP N-terminal domain 13 82 8.6E-28 T 28-03-2018 IPR028989 Ribosome maturation factor RimP, N-terminal AM393_RS07500 793052b6773887eead91bbd455325659 150 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 6 150 24.119 T 28-03-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 AM393_RS07500 793052b6773887eead91bbd455325659 150 Pfam PF17384 RimP C-terminal SH3 domain 85 150 1.6E-22 T 28-03-2018 IPR028998 Ribosome maturation factor RimP, C-terminal AM393_RS07500 793052b6773887eead91bbd455325659 150 Gene3D G3DSA:3.30.300.70 1 79 1.5E-26 T 28-03-2018 IPR028989 Ribosome maturation factor RimP, N-terminal AM393_RS07500 793052b6773887eead91bbd455325659 150 SUPERFAMILY SSF74942 83 150 8.24E-17 T 28-03-2018 IPR028998 Ribosome maturation factor RimP, C-terminal AM393_RS07500 793052b6773887eead91bbd455325659 150 Gene3D G3DSA:2.30.30.180 87 147 4.4E-18 T 28-03-2018 IPR028998 Ribosome maturation factor RimP, C-terminal AM393_RS07500 793052b6773887eead91bbd455325659 150 SUPERFAMILY SSF75420 3 82 1.83E-24 T 28-03-2018 IPR028989 Ribosome maturation factor RimP, N-terminal AM393_RS23350 62c019b0a04d9a02a24a89300f9a2c1e 203 SMART SM00421 140 197 2.3E-5 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS23350 62c019b0a04d9a02a24a89300f9a2c1e 203 Gene3D G3DSA:1.10.10.10 9 200 3.6E-10 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS23350 62c019b0a04d9a02a24a89300f9a2c1e 203 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 193 4.9E-12 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS23350 62c019b0a04d9a02a24a89300f9a2c1e 203 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 143 157 5.2E-7 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS23350 62c019b0a04d9a02a24a89300f9a2c1e 203 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 157 173 5.2E-7 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS23350 62c019b0a04d9a02a24a89300f9a2c1e 203 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 173 185 5.2E-7 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS23350 62c019b0a04d9a02a24a89300f9a2c1e 203 SUPERFAMILY SSF46894 129 195 1.09E-12 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM393_RS18055 6023107c71350124b044dcf5c353cc8f 65 Pfam PF04328 Selenoprotein, putative 5 65 1.2E-29 T 28-03-2018 IPR007423 Selenoprotein, putative AM393_RS11760 e21f52db91db7630e65175de98e2e228 66 Pfam PF02597 ThiS family 5 66 3.4E-14 T 28-03-2018 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 Reactome: R-HSA-947581 AM393_RS11760 e21f52db91db7630e65175de98e2e228 66 SUPERFAMILY SSF54285 1 66 7.56E-18 T 28-03-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp AM393_RS11760 e21f52db91db7630e65175de98e2e228 66 Gene3D G3DSA:3.10.20.30 1 66 9.5E-22 T 28-03-2018 IPR012675 Beta-grasp domain AM393_RS11760 e21f52db91db7630e65175de98e2e228 66 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 6 66 1.2E-19 T 28-03-2018 IPR010035 ThiS, thiamine-biosynthesis AM393_RS10515 243ff2084ec66f6cbe64b3b412aa4e86 177 Gene3D G3DSA:1.10.520.20 2 106 1.3E-28 T 28-03-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM393_RS10515 243ff2084ec66f6cbe64b3b412aa4e86 177 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 174 3.2E-51 T 28-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM393_RS10515 243ff2084ec66f6cbe64b3b412aa4e86 177 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 137 156 - T 28-03-2018 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM393_RS10515 243ff2084ec66f6cbe64b3b412aa4e86 177 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 7 175 1.7E-65 T 28-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM393_RS10515 243ff2084ec66f6cbe64b3b412aa4e86 177 PRINTS PR00125 ATP synthase delta subunit signature 74 85 5.4E-29 T 28-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM393_RS10515 243ff2084ec66f6cbe64b3b412aa4e86 177 PRINTS PR00125 ATP synthase delta subunit signature 85 99 5.4E-29 T 28-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM393_RS10515 243ff2084ec66f6cbe64b3b412aa4e86 177 PRINTS PR00125 ATP synthase delta subunit signature 7 26 5.4E-29 T 28-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM393_RS10515 243ff2084ec66f6cbe64b3b412aa4e86 177 PRINTS PR00125 ATP synthase delta subunit signature 150 168 5.4E-29 T 28-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM393_RS10515 243ff2084ec66f6cbe64b3b412aa4e86 177 PRINTS PR00125 ATP synthase delta subunit signature 135 150 5.4E-29 T 28-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM393_RS10515 243ff2084ec66f6cbe64b3b412aa4e86 177 SUPERFAMILY SSF47928 3 104 2.88E-28 T 28-03-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM393_RS10515 243ff2084ec66f6cbe64b3b412aa4e86 177 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 177 18.943 T 28-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM393_RS26130 3cc6325ced3ab1b1fa4c61e64d049a21 257 Pfam PF00005 ABC transporter 31 168 2.9E-32 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS26130 3cc6325ced3ab1b1fa4c61e64d049a21 257 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS26130 3cc6325ced3ab1b1fa4c61e64d049a21 257 Gene3D G3DSA:3.40.50.300 8 248 3.1E-55 T 28-03-2018 AM393_RS26130 3cc6325ced3ab1b1fa4c61e64d049a21 257 SMART SM00382 40 219 1.2E-13 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS26130 3cc6325ced3ab1b1fa4c61e64d049a21 257 SUPERFAMILY SSF52540 16 242 3.75E-64 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS19980 e2602089782fde2fe9b063d543b62781 227 Gene3D G3DSA:3.40.50.300 4 224 1.9E-53 T 28-03-2018 AM393_RS19980 e2602089782fde2fe9b063d543b62781 227 TIGRFAM TIGR00017 cmk: cytidylate kinase 6 219 1.5E-95 T 28-03-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 AM393_RS19980 e2602089782fde2fe9b063d543b62781 227 SUPERFAMILY SSF52540 6 224 3.17E-47 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS19980 e2602089782fde2fe9b063d543b62781 227 Hamap MF_00238 Cytidylate kinase [cmk]. 6 224 34.742 T 28-03-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 AM393_RS19980 e2602089782fde2fe9b063d543b62781 227 Pfam PF02224 Cytidylate kinase 8 221 5.5E-83 T 28-03-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 AM393_RS04660 0059b8fb068dff101cc4f6d44a092627 320 Gene3D G3DSA:3.40.50.2300 158 319 7.8E-26 T 28-03-2018 AM393_RS04660 0059b8fb068dff101cc4f6d44a092627 320 SUPERFAMILY SSF47413 1 59 1.53E-16 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM393_RS04660 0059b8fb068dff101cc4f6d44a092627 320 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 6.3E-17 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM393_RS04660 0059b8fb068dff101cc4f6d44a092627 320 Gene3D G3DSA:1.10.260.40 3 54 4.0E-20 T 28-03-2018 AM393_RS04660 0059b8fb068dff101cc4f6d44a092627 320 Pfam PF13377 Periplasmic binding protein-like domain 159 316 1.2E-24 T 28-03-2018 AM393_RS04660 0059b8fb068dff101cc4f6d44a092627 320 SUPERFAMILY SSF53822 62 317 9.42E-29 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AM393_RS04660 0059b8fb068dff101cc4f6d44a092627 320 SMART SM00354 1 71 2.5E-26 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM393_RS04660 0059b8fb068dff101cc4f6d44a092627 320 Gene3D G3DSA:3.40.50.2300 55 157 4.4E-9 T 28-03-2018 AM393_RS12910 4804d3549b793c2fbf30a1d6c6441db7 228 Gene3D G3DSA:3.40.225.10 1 227 4.6E-59 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal AM393_RS12910 4804d3549b793c2fbf30a1d6c6441db7 228 Hamap MF_01952 L-ribulose-5-phosphate 4-epimerase UlaF [ulaF]. 1 228 65.994 T 28-03-2018 IPR023499 L-ribulose-5-phosphate 4-epimerase UlaF GO:0008742 KEGG: 00040+5.1.3.4|KEGG: 00053+5.1.3.4|MetaCyc: PWY-6961 AM393_RS12910 4804d3549b793c2fbf30a1d6c6441db7 228 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 7 193 1.8E-46 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal AM393_RS12910 4804d3549b793c2fbf30a1d6c6441db7 228 SUPERFAMILY SSF53639 2 219 1.61E-69 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal AM393_RS12910 4804d3549b793c2fbf30a1d6c6441db7 228 SMART SM01007 6 194 1.8E-66 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal AM393_RS01930 7a5d1b54e210b1751aa939bf826b558d 487 TIGRFAM TIGR01312 XylB: xylulokinase 3 478 1.3E-198 T 28-03-2018 IPR006000 Xylulokinase GO:0004856|GO:0005997 KEGG: 00040+2.7.1.17 AM393_RS01930 7a5d1b54e210b1751aa939bf826b558d 487 Gene3D G3DSA:3.30.420.40 240 487 1.4E-56 T 28-03-2018 AM393_RS01930 7a5d1b54e210b1751aa939bf826b558d 487 Gene3D G3DSA:3.30.420.40 1 239 2.2E-79 T 28-03-2018 AM393_RS01930 7a5d1b54e210b1751aa939bf826b558d 487 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 351 371 - T 28-03-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AM393_RS01930 7a5d1b54e210b1751aa939bf826b558d 487 PIRSF PIRSF000538 1 487 3.2E-136 T 28-03-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AM393_RS01930 7a5d1b54e210b1751aa939bf826b558d 487 SUPERFAMILY SSF53067 2 246 6.48E-78 T 28-03-2018 AM393_RS01930 7a5d1b54e210b1751aa939bf826b558d 487 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 128 140 - T 28-03-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AM393_RS01930 7a5d1b54e210b1751aa939bf826b558d 487 SUPERFAMILY SSF53067 245 478 1.76E-58 T 28-03-2018 AM393_RS01930 7a5d1b54e210b1751aa939bf826b558d 487 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 252 440 1.6E-37 T 28-03-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 AM393_RS01930 7a5d1b54e210b1751aa939bf826b558d 487 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 1 243 2.1E-75 T 28-03-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 AM393_RS09305 07b4e060afa90445fab559e8a72afed8 557 Pfam PF08019 Domain of unknown function (DUF1705) 57 170 7.5E-20 T 28-03-2018 IPR012549 Phosphoethanolamine transferase, N-terminal GO:0016021 AM393_RS09305 07b4e060afa90445fab559e8a72afed8 557 SUPERFAMILY SSF53649 250 543 3.27E-18 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AM393_RS09305 07b4e060afa90445fab559e8a72afed8 557 Pfam PF00884 Sulfatase 250 539 4.5E-46 T 28-03-2018 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 AM393_RS09305 07b4e060afa90445fab559e8a72afed8 557 Gene3D G3DSA:3.40.720.10 246 545 4.2E-18 T 28-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AM393_RS21285 4f584d606297afc7ce0f09148c5ca635 358 SUPERFAMILY SSF50129 3 184 3.3E-37 T 28-03-2018 IPR011032 GroES-like AM393_RS21285 4f584d606297afc7ce0f09148c5ca635 358 SUPERFAMILY SSF51735 147 321 6.88E-35 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS21285 4f584d606297afc7ce0f09148c5ca635 358 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 60 74 - T 28-03-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 AM393_RS21285 4f584d606297afc7ce0f09148c5ca635 358 Gene3D G3DSA:3.40.50.720 174 322 6.2E-21 T 28-03-2018 AM393_RS21285 4f584d606297afc7ce0f09148c5ca635 358 Pfam PF00107 Zinc-binding dehydrogenase 185 316 1.9E-28 T 28-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AM393_RS21285 4f584d606297afc7ce0f09148c5ca635 358 SMART SM00829 9 352 0.0084 T 28-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AM393_RS21285 4f584d606297afc7ce0f09148c5ca635 358 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 132 2.6E-25 T 28-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AM393_RS21285 4f584d606297afc7ce0f09148c5ca635 358 Gene3D G3DSA:3.90.180.10 1 173 1.4E-38 T 28-03-2018 AM393_RS10280 00f098f60ede4e2b97793801b8a380aa 553 Pfam PF06826 Predicted Permease Membrane Region 374 546 2.0E-47 T 28-03-2018 IPR006512 YidE/YbjL duplication AM393_RS10280 00f098f60ede4e2b97793801b8a380aa 553 Pfam PF06826 Predicted Permease Membrane Region 11 179 3.9E-42 T 28-03-2018 IPR006512 YidE/YbjL duplication AM393_RS10280 00f098f60ede4e2b97793801b8a380aa 553 SUPERFAMILY SSF116726 203 271 2.88E-9 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AM393_RS10280 00f098f60ede4e2b97793801b8a380aa 553 SUPERFAMILY SSF116726 286 360 2.62E-12 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AM393_RS10280 00f098f60ede4e2b97793801b8a380aa 553 Gene3D G3DSA:3.30.70.1450 189 278 1.6E-9 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AM393_RS10280 00f098f60ede4e2b97793801b8a380aa 553 Gene3D G3DSA:3.30.70.1450 279 366 9.5E-14 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AM393_RS10280 00f098f60ede4e2b97793801b8a380aa 553 Pfam PF02080 TrkA-C domain 291 360 5.2E-10 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AM393_RS10280 00f098f60ede4e2b97793801b8a380aa 553 Hamap MF_01016 Putative transport protein YidE [yidE]. 1 553 56.938 T 28-03-2018 IPR023018 Transport protein YidE, putative AM393_RS10280 00f098f60ede4e2b97793801b8a380aa 553 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 379 533 5.2E-50 T 28-03-2018 IPR006512 YidE/YbjL duplication AM393_RS10280 00f098f60ede4e2b97793801b8a380aa 553 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 16 166 1.7E-38 T 28-03-2018 IPR006512 YidE/YbjL duplication AM393_RS09805 f42ee4bb98d1690b19f859bfbdeadfb4 229 SUPERFAMILY SSF75217 5 173 1.44E-49 T 28-03-2018 IPR029028 Alpha/beta knot methyltransferases AM393_RS09805 f42ee4bb98d1690b19f859bfbdeadfb4 229 Hamap MF_02060 tRNA (guanosine(18)-2'-O)-methyltransferase [trmH]. 2 197 37.041 T 28-03-2018 IPR033671 tRNA (guanosine(18)-2'-O)-methyltransferase GO:0008168|GO:0030488 AM393_RS09805 f42ee4bb98d1690b19f859bfbdeadfb4 229 Gene3D G3DSA:3.40.1280.10 1 190 1.2E-47 T 28-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AM393_RS09805 f42ee4bb98d1690b19f859bfbdeadfb4 229 Pfam PF00588 SpoU rRNA Methylase family 20 159 5.7E-37 T 28-03-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AM393_RS09805 f42ee4bb98d1690b19f859bfbdeadfb4 229 Pfam PF12105 SpoU, rRNA methylase, C-terminal 163 218 4.0E-24 T 28-03-2018 IPR022724 RNA methyltransferase, SpoU/TrmH type, C-terminal GO:0009020 AM393_RS21870 64cfd0bcb8f721200e75c0851f92b072 465 PIRSF PIRSF019381 1 465 3.0E-218 T 28-03-2018 IPR007413 Protein of unknown function DUF463, YcjX-like protein AM393_RS21870 64cfd0bcb8f721200e75c0851f92b072 465 Gene3D G3DSA:3.40.50.300 14 435 3.6E-15 T 28-03-2018 AM393_RS21870 64cfd0bcb8f721200e75c0851f92b072 465 Pfam PF04317 YcjX-like family, DUF463 20 464 1.1E-185 T 28-03-2018 IPR007413 Protein of unknown function DUF463, YcjX-like protein AM393_RS24925 051ade4c580c1bdeb790ce63fe58290d 460 Pfam PF07690 Major Facilitator Superfamily 43 419 4.9E-11 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS24925 051ade4c580c1bdeb790ce63fe58290d 460 TIGRFAM TIGR00886 2A0108: nitrite transporter 34 415 8.4E-105 T 28-03-2018 IPR004737 Nitrate transporter GO:0015112|GO:0015113|GO:0015706|GO:0015707|GO:0016021 AM393_RS24925 051ade4c580c1bdeb790ce63fe58290d 460 Gene3D G3DSA:1.20.1250.20 242 460 4.6E-23 T 28-03-2018 AM393_RS24925 051ade4c580c1bdeb790ce63fe58290d 460 Gene3D G3DSA:1.20.1250.20 20 234 1.4E-15 T 28-03-2018 AM393_RS24925 051ade4c580c1bdeb790ce63fe58290d 460 SUPERFAMILY SSF103473 14 459 1.44E-38 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS15610 d705deb8ad549a19c985495056db8fa7 447 Hamap MF_00425 Na(+)-translocating NADH-quinone reductase subunit A [nqrA]. 1 447 45.871 T 28-03-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 AM393_RS15610 d705deb8ad549a19c985495056db8fa7 447 Pfam PF11973 NQRA C-terminal domain 262 311 6.7E-22 T 28-03-2018 IPR022615 Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain GO:0016655|GO:0055114 AM393_RS15610 d705deb8ad549a19c985495056db8fa7 447 Gene3D G3DSA:2.40.50.100 52 95 4.5E-4 T 28-03-2018 AM393_RS15610 d705deb8ad549a19c985495056db8fa7 447 TIGRFAM TIGR01936 nqrA: NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit 2 447 3.5E-181 T 28-03-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 AM393_RS15610 d705deb8ad549a19c985495056db8fa7 447 Gene3D G3DSA:2.40.50.100 16 51 0.0044 T 28-03-2018 AM393_RS15610 d705deb8ad549a19c985495056db8fa7 447 Pfam PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) 1 257 7.7E-109 T 28-03-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 AM393_RS07940 135bf153864ae0b8e29ffac8b54d2d85 293 Gene3D G3DSA:3.40.50.150 99 292 3.0E-32 T 28-03-2018 AM393_RS07940 135bf153864ae0b8e29ffac8b54d2d85 293 SUPERFAMILY SSF53335 44 291 6.46E-43 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM393_RS07940 135bf153864ae0b8e29ffac8b54d2d85 293 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 286 1.7E-124 T 28-03-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 AM393_RS07940 135bf153864ae0b8e29ffac8b54d2d85 293 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 292 33.481 T 28-03-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 AM393_RS07940 135bf153864ae0b8e29ffac8b54d2d85 293 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 3 292 1.5E-105 T 28-03-2018 AM393_RS07940 135bf153864ae0b8e29ffac8b54d2d85 293 PIRSF PIRSF000401 1 293 2.2E-94 T 28-03-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 AM393_RS28735 1d3b6e61a4488749299d54255b75fd2d 111 ProSitePatterns PS00028 Zinc finger C2H2 type domain signature. 10 30 - T 28-03-2018 IPR013087 Zinc finger C2H2-type GO:0003676 AM393_RS28735 1d3b6e61a4488749299d54255b75fd2d 111 SMART SM00355 8 30 5.6E-4 T 28-03-2018 IPR013087 Zinc finger C2H2-type GO:0003676 AM393_RS28735 1d3b6e61a4488749299d54255b75fd2d 111 Gene3D G3DSA:2.40.155.10 3 90 8.2E-7 T 28-03-2018 AM393_RS28735 1d3b6e61a4488749299d54255b75fd2d 111 SUPERFAMILY SSF57667 5 31 1.55E-5 T 28-03-2018 IPR013087 Zinc finger C2H2-type GO:0003676 AM393_RS29135 bef5ae42c4f46796e721c256897bca73 934 SUPERFAMILY SSF89550 198 282 8.63E-6 T 28-03-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 AM393_RS29135 bef5ae42c4f46796e721c256897bca73 934 SUPERFAMILY SSF89550 9 106 8.63E-6 T 28-03-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 AM393_RS29135 bef5ae42c4f46796e721c256897bca73 934 Gene3D G3DSA:3.40.50.300 314 888 1.1E-21 T 28-03-2018 AM393_RS29135 bef5ae42c4f46796e721c256897bca73 934 Gene3D G3DSA:3.20.20.140 5 271 2.7E-10 T 28-03-2018 AM393_RS29135 bef5ae42c4f46796e721c256897bca73 934 SUPERFAMILY SSF52540 315 495 6.85E-22 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS29135 bef5ae42c4f46796e721c256897bca73 934 SUPERFAMILY SSF52540 622 735 6.85E-22 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS29135 bef5ae42c4f46796e721c256897bca73 934 SUPERFAMILY SSF52540 779 870 6.85E-22 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS24910 3e53ff2722de0f12ac0588377352e9e6 265 Gene3D G3DSA:3.30.450.40 90 265 9.1E-48 T 28-03-2018 IPR029016 GAF domain-like AM393_RS24910 3e53ff2722de0f12ac0588377352e9e6 265 Pfam PF09339 IclR helix-turn-helix domain 23 71 2.2E-13 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AM393_RS24910 3e53ff2722de0f12ac0588377352e9e6 265 SUPERFAMILY SSF46785 23 92 2.35E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS24910 3e53ff2722de0f12ac0588377352e9e6 265 Pfam PF01614 Bacterial transcriptional regulator 140 263 1.4E-31 T 28-03-2018 IPR014757 Transcription regulator IclR, C-terminal AM393_RS24910 3e53ff2722de0f12ac0588377352e9e6 265 SUPERFAMILY SSF55781 87 265 1.18E-43 T 28-03-2018 IPR029016 GAF domain-like AM393_RS24910 3e53ff2722de0f12ac0588377352e9e6 265 Gene3D G3DSA:1.10.10.10 12 89 1.2E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS24910 3e53ff2722de0f12ac0588377352e9e6 265 SMART SM00346 21 110 1.9E-20 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AM393_RS14835 e736f4b98c3429ef4ace1096ce1043a0 360 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 37 360 2.4E-161 T 28-03-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AM393_RS14835 e736f4b98c3429ef4ace1096ce1043a0 360 Pfam PF00953 Glycosyl transferase family 4 99 284 3.1E-34 T 28-03-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193 AM393_RS14835 e736f4b98c3429ef4ace1096ce1043a0 360 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 68 80 9.3E-6 T 28-03-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AM393_RS14835 e736f4b98c3429ef4ace1096ce1043a0 360 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 28-03-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AM393_RS14835 e736f4b98c3429ef4ace1096ce1043a0 360 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 358 25.746 T 28-03-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AM393_RS14835 e736f4b98c3429ef4ace1096ce1043a0 360 ProSitePatterns PS01348 MraY family signature 2. 189 200 - T 28-03-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AM393_RS08390 0067fcfa6607706c9e1f3d2510d1b6a8 240 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 27 153 5.0E-68 T 28-03-2018 IPR013559 YheO-like AM393_RS08390 0067fcfa6607706c9e1f3d2510d1b6a8 240 Pfam PF13309 HTH domain 171 228 1.1E-18 T 28-03-2018 AM393_RS08390 0067fcfa6607706c9e1f3d2510d1b6a8 240 Pfam PF08348 YheO-like PAS domain 29 137 4.7E-36 T 28-03-2018 IPR013559 YheO-like AM393_RS08390 0067fcfa6607706c9e1f3d2510d1b6a8 240 Gene3D G3DSA:1.10.10.60 185 239 3.9E-6 T 28-03-2018 AM393_RS22985 7738e69266f3a8783d2f1fa4c256624c 508 Pfam PF03806 AbgT putative transporter family 16 505 3.5E-198 T 28-03-2018 IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 AM393_RS22985 7738e69266f3a8783d2f1fa4c256624c 508 TIGRFAM TIGR00819 ydaH: AbgT transporter family 1 507 1.2E-254 T 28-03-2018 IPR011540 AbgT, Proteobacteria GO:0015558|GO:1902604 AM393_RS19470 853d50952f89fcbabbde9d549ce935ea 77 ProDom PD057914 C0939 STY4639 GPA GP33 PRECURSOR FELS-2 5'REGION STY3665 SIGNAL PHAGE-RELATED 1 77 7.0E-23 T 28-03-2018 IPR020126 Protein of unknown function DUF2732 AM393_RS19470 853d50952f89fcbabbde9d549ce935ea 77 Pfam PF10809 Protein of unknown function (DUF2732) 1 76 2.2E-24 T 28-03-2018 IPR020126 Protein of unknown function DUF2732 AM393_RS29095 2deebc7758c11d5cea48d78f8450d0a7 232 SUPERFAMILY SSF46785 65 191 4.28E-29 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS29095 2deebc7758c11d5cea48d78f8450d0a7 232 Pfam PF01051 Initiator Replication protein 65 232 3.4E-31 T 28-03-2018 IPR000525 Initiator Rep protein GO:0003887|GO:0005727|GO:0006270 AM393_RS29095 2deebc7758c11d5cea48d78f8450d0a7 232 Gene3D G3DSA:1.10.10.10 56 204 1.6E-28 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS29095 2deebc7758c11d5cea48d78f8450d0a7 232 SUPERFAMILY SSF46785 192 232 2.18E-6 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS17120 d3cb78f3b67ca2ac6a5ad7b4bf1aa0a1 461 Pfam PF09979 Uncharacterized protein conserved in bacteria (DUF2213) 49 177 2.2E-5 T 28-03-2018 IPR016913 Uncharacterised conserved protein UCP029215 AM393_RS06335 802695aa52315d3fc4a8478e26e3daf4 86 SUPERFAMILY SSF47413 3 70 3.37E-29 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM393_RS06335 802695aa52315d3fc4a8478e26e3daf4 86 Gene3D G3DSA:1.10.260.40 1 71 2.6E-13 T 28-03-2018 AM393_RS06335 802695aa52315d3fc4a8478e26e3daf4 86 Pfam PF13693 Winged helix-turn-helix DNA-binding 5 78 2.7E-35 T 28-03-2018 AM393_RS05955 aac8df3dfec295d10ca6ca5f2df137ff 438 SUPERFAMILY SSF55920 175 433 4.45E-87 T 28-03-2018 IPR000994 Peptidase M24 AM393_RS05955 aac8df3dfec295d10ca6ca5f2df137ff 438 Gene3D G3DSA:3.90.230.10 172 438 2.7E-88 T 28-03-2018 AM393_RS05955 aac8df3dfec295d10ca6ca5f2df137ff 438 PRINTS PR00599 Methionine aminopeptidase-1 signature 253 269 1.3E-5 T 28-03-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 AM393_RS05955 aac8df3dfec295d10ca6ca5f2df137ff 438 PRINTS PR00599 Methionine aminopeptidase-1 signature 370 382 1.3E-5 T 28-03-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 AM393_RS05955 aac8df3dfec295d10ca6ca5f2df137ff 438 SMART SM01011 1 136 8.0E-57 T 28-03-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 AM393_RS05955 aac8df3dfec295d10ca6ca5f2df137ff 438 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 348 360 - T 28-03-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site AM393_RS05955 aac8df3dfec295d10ca6ca5f2df137ff 438 Pfam PF00557 Metallopeptidase family M24 181 411 2.2E-65 T 28-03-2018 IPR000994 Peptidase M24 AM393_RS05955 aac8df3dfec295d10ca6ca5f2df137ff 438 Gene3D G3DSA:3.40.350.10 1 171 1.6E-47 T 28-03-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal AM393_RS05955 aac8df3dfec295d10ca6ca5f2df137ff 438 SUPERFAMILY SSF53092 2 174 4.55E-52 T 28-03-2018 IPR028980 Creatinase/Aminopeptidase P, N-terminal AM393_RS05955 aac8df3dfec295d10ca6ca5f2df137ff 438 Pfam PF05195 Aminopeptidase P, N-terminal domain 8 126 3.3E-35 T 28-03-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 AM393_RS22155 aa423cf75f7280adc4add1b9189ea97c 93 Gene3D G3DSA:1.20.5.730 51 88 0.0012 T 28-03-2018 AM393_RS22155 aa423cf75f7280adc4add1b9189ea97c 93 Pfam PF16808 Coiled-coil N-terminus of cGMP-dependent protein kinase 54 78 1.6E-6 T 28-03-2018 IPR031831 cGMP-dependent protein kinase, N-terminal coiled-coil domain Reactome: R-HSA-392517|Reactome: R-HSA-4086398|Reactome: R-HSA-418457 AM393_RS08445 fa9e144a136a886a0eabd91d05030806 289 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 7 214 1.3E-75 T 28-03-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 Reactome: R-HSA-73614 AM393_RS08445 fa9e144a136a886a0eabd91d05030806 289 ProSitePatterns PS00567 Phosphoribulokinase signature. 164 177 - T 28-03-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 AM393_RS08445 fa9e144a136a886a0eabd91d05030806 289 PRINTS PR00478 Phosphoribulokinase family signature 126 144 9.1E-29 T 28-03-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 AM393_RS08445 fa9e144a136a886a0eabd91d05030806 289 PRINTS PR00478 Phosphoribulokinase family signature 164 181 9.1E-29 T 28-03-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 AM393_RS08445 fa9e144a136a886a0eabd91d05030806 289 PRINTS PR00478 Phosphoribulokinase family signature 182 205 9.1E-29 T 28-03-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 AM393_RS08445 fa9e144a136a886a0eabd91d05030806 289 PRINTS PR00478 Phosphoribulokinase family signature 12 29 9.1E-29 T 28-03-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 AM393_RS08445 fa9e144a136a886a0eabd91d05030806 289 SUPERFAMILY SSF52540 4 286 3.7E-46 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS08445 fa9e144a136a886a0eabd91d05030806 289 Gene3D G3DSA:3.40.50.300 1 289 5.1E-42 T 28-03-2018 AM393_RS11815 474af24cd1c6faf2f78229fa47979882 145 ProDom PD097062 ZINC RESISTANCE-ASSOCIATED PERIPLASMIC PRECURSOR SIGNAL YJAI SEQUENCING DIRECT DFFA 39 123 2.0E-29 T 28-03-2018 IPR020365 Zinc resistance-associated protein, ZraP GO:0008270|GO:0042597 AM393_RS11815 474af24cd1c6faf2f78229fa47979882 145 Pfam PF13801 Heavy-metal resistance 6 124 1.8E-27 T 28-03-2018 IPR025961 Heavy-metal resistance protein AM393_RS00840 b56c91ee67dfd2498756fd5c310a8b95 79 Pfam PF10678 Protein of unknown function (DUF2492) 3 78 4.6E-35 T 28-03-2018 IPR019620 Putative metal-binding protein AM393_RS00840 b56c91ee67dfd2498756fd5c310a8b95 79 TIGRFAM TIGR03853 matur_matur: putative metal-binding protein 3 79 1.6E-34 T 28-03-2018 IPR019620 Putative metal-binding protein AM393_RS10400 ec96a4de8ec258073138b2eae708ee93 139 Pfam PF00583 Acetyltransferase (GNAT) family 39 120 4.1E-10 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AM393_RS10400 ec96a4de8ec258073138b2eae708ee93 139 SUPERFAMILY SSF55729 13 125 1.36E-19 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM393_RS10400 ec96a4de8ec258073138b2eae708ee93 139 Gene3D G3DSA:3.40.630.30 6 134 1.0E-13 T 28-03-2018 AM393_RS12870 055a2a7c9db673b61fb7c2b5a5e0dd40 238 Pfam PF00326 Prolyl oligopeptidase family 51 238 3.4E-15 T 28-03-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 AM393_RS12870 055a2a7c9db673b61fb7c2b5a5e0dd40 238 SUPERFAMILY SSF53474 19 238 1.12E-41 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AM393_RS12870 055a2a7c9db673b61fb7c2b5a5e0dd40 238 Gene3D G3DSA:3.40.50.1820 17 238 1.2E-36 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AM393_RS27860 8598921761dcf9d9f3686159b99e804e 134 Gene3D G3DSA:1.10.10.10 1 72 3.2E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS27860 8598921761dcf9d9f3686159b99e804e 134 SUPERFAMILY SSF48295 7 59 1.31E-11 T 28-03-2018 IPR010921 Trp repressor/replication initiator GO:0043565 AM393_RS27860 8598921761dcf9d9f3686159b99e804e 134 Pfam PF01527 Transposase 12 70 7.0E-13 T 28-03-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 AM393_RS27585 8598921761dcf9d9f3686159b99e804e 134 Gene3D G3DSA:1.10.10.10 1 72 3.2E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS27585 8598921761dcf9d9f3686159b99e804e 134 SUPERFAMILY SSF48295 7 59 1.31E-11 T 28-03-2018 IPR010921 Trp repressor/replication initiator GO:0043565 AM393_RS27585 8598921761dcf9d9f3686159b99e804e 134 Pfam PF01527 Transposase 12 70 7.0E-13 T 28-03-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 AM393_RS01200 8598921761dcf9d9f3686159b99e804e 134 Gene3D G3DSA:1.10.10.10 1 72 3.2E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS01200 8598921761dcf9d9f3686159b99e804e 134 SUPERFAMILY SSF48295 7 59 1.31E-11 T 28-03-2018 IPR010921 Trp repressor/replication initiator GO:0043565 AM393_RS01200 8598921761dcf9d9f3686159b99e804e 134 Pfam PF01527 Transposase 12 70 7.0E-13 T 28-03-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 AM393_RS25500 8f223a8dfc98fedb6e319c0c31134919 298 Gene3D G3DSA:3.20.20.100 1 298 7.4E-61 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM393_RS25500 8f223a8dfc98fedb6e319c0c31134919 298 Pfam PF00248 Aldo/keto reductase family 18 291 4.8E-56 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM393_RS25500 8f223a8dfc98fedb6e319c0c31134919 298 SUPERFAMILY SSF51430 7 295 3.93E-71 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM393_RS18840 181fcfaee6934408da9567aa993e73bb 338 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 2 335 3.2E-151 T 28-03-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-70370 AM393_RS18840 181fcfaee6934408da9567aa993e73bb 338 Gene3D G3DSA:3.40.50.720 1 207 3.4E-45 T 28-03-2018 AM393_RS18840 181fcfaee6934408da9567aa993e73bb 338 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 325 1.8E-65 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS18840 181fcfaee6934408da9567aa993e73bb 338 SUPERFAMILY SSF51735 1 336 4.15E-101 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS18840 181fcfaee6934408da9567aa993e73bb 338 Gene3D G3DSA:3.90.25.10 252 337 2.6E-21 T 28-03-2018 AM393_RS18840 181fcfaee6934408da9567aa993e73bb 338 Gene3D G3DSA:3.90.25.10 208 251 1.0E-12 T 28-03-2018 AM393_RS05315 b1fb5b64b3019d3a66527a3a6e7a329a 450 SUPERFAMILY SSF142984 171 239 3.27E-13 T 28-03-2018 AM393_RS05315 b1fb5b64b3019d3a66527a3a6e7a329a 450 SUPERFAMILY SSF46548 213 340 1.15E-12 T 28-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AM393_RS05315 b1fb5b64b3019d3a66527a3a6e7a329a 450 PIRSF PIRSF036408 11 449 2.2E-187 T 28-03-2018 IPR017054 Propanediol utilization protein, PduS, predicted AM393_RS05315 b1fb5b64b3019d3a66527a3a6e7a329a 450 SUPERFAMILY SSF142019 9 177 7.59E-48 T 28-03-2018 AM393_RS05315 b1fb5b64b3019d3a66527a3a6e7a329a 450 Pfam PF10531 SLBB domain 173 218 1.3E-9 T 28-03-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM393_RS05315 b1fb5b64b3019d3a66527a3a6e7a329a 450 Pfam PF13534 4Fe-4S dicluster domain 263 323 1.9E-7 T 28-03-2018 AM393_RS05315 b1fb5b64b3019d3a66527a3a6e7a329a 450 Pfam PF13375 RnfC Barrel sandwich hybrid domain 388 446 2.9E-13 T 28-03-2018 IPR026902 RnfC Barrel sandwich hybrid domain AM393_RS05315 b1fb5b64b3019d3a66527a3a6e7a329a 450 Gene3D G3DSA:3.30.70.20 272 334 1.3E-5 T 28-03-2018 AM393_RS05315 b1fb5b64b3019d3a66527a3a6e7a329a 450 Gene3D G3DSA:3.30.70.20 228 271 0.0066 T 28-03-2018 AM393_RS05315 b1fb5b64b3019d3a66527a3a6e7a329a 450 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 20 159 9.8E-41 T 28-03-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM393_RS05315 b1fb5b64b3019d3a66527a3a6e7a329a 450 Gene3D G3DSA:2.40.50.100 335 449 7.0E-5 T 28-03-2018 AM393_RS23685 c9ad3cfdd1d891d7ae381d42d7a54e32 357 SUPERFAMILY SSF51412 108 353 1.53E-61 T 28-03-2018 AM393_RS23685 c9ad3cfdd1d891d7ae381d42d7a54e32 357 SUPERFAMILY SSF51412 4 78 1.53E-61 T 28-03-2018 AM393_RS23685 c9ad3cfdd1d891d7ae381d42d7a54e32 357 Pfam PF03060 Nitronate monooxygenase 9 352 1.8E-77 T 28-03-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 AM393_RS23685 c9ad3cfdd1d891d7ae381d42d7a54e32 357 Gene3D G3DSA:3.20.20.70 2 354 3.5E-50 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM393_RS03500 0678ad25425a545edd083c46c38cbaf6 488 Pfam PF00571 CBS domain 153 202 2.8E-4 T 28-03-2018 IPR000644 CBS domain AM393_RS03500 0678ad25425a545edd083c46c38cbaf6 488 Pfam PF00571 CBS domain 95 140 5.4E-9 T 28-03-2018 IPR000644 CBS domain AM393_RS03500 0678ad25425a545edd083c46c38cbaf6 488 SMART SM00116 96 144 2.9E-11 T 28-03-2018 IPR000644 CBS domain AM393_RS03500 0678ad25425a545edd083c46c38cbaf6 488 SMART SM00116 158 206 9.2E-9 T 28-03-2018 IPR000644 CBS domain AM393_RS03500 0678ad25425a545edd083c46c38cbaf6 488 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 295 307 - T 28-03-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 AM393_RS03500 0678ad25425a545edd083c46c38cbaf6 488 Gene3D G3DSA:3.20.20.70 1 482 8.9E-115 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM393_RS03500 0678ad25425a545edd083c46c38cbaf6 488 PIRSF PIRSF000130 1 487 4.2E-196 T 28-03-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 AM393_RS03500 0678ad25425a545edd083c46c38cbaf6 488 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 8 454 9.7E-199 T 28-03-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 AM393_RS03500 0678ad25425a545edd083c46c38cbaf6 488 SUPERFAMILY SSF51412 217 477 2.62E-125 T 28-03-2018 AM393_RS03500 0678ad25425a545edd083c46c38cbaf6 488 SUPERFAMILY SSF51412 1 90 2.62E-125 T 28-03-2018 AM393_RS03500 0678ad25425a545edd083c46c38cbaf6 488 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 8 486 84.758 T 28-03-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 AM393_RS03500 0678ad25425a545edd083c46c38cbaf6 488 SUPERFAMILY SSF54631 94 203 1.14E-24 T 28-03-2018 AM393_RS03500 0678ad25425a545edd083c46c38cbaf6 488 SMART SM01240 7 473 0.0 T 28-03-2018 AM393_RS03500 0678ad25425a545edd083c46c38cbaf6 488 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 8 473 1.1E-160 T 28-03-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 AM393_RS03150 0d012980f97e9ba4154bf24930871052 432 Gene3D G3DSA:1.10.10.10 3 71 5.8E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS03150 0d012980f97e9ba4154bf24930871052 432 Pfam PF00155 Aminotransferase class I and II 143 424 1.7E-27 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AM393_RS03150 0d012980f97e9ba4154bf24930871052 432 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 29 43 2.1E-5 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM393_RS03150 0d012980f97e9ba4154bf24930871052 432 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 43 59 2.1E-5 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM393_RS03150 0d012980f97e9ba4154bf24930871052 432 SUPERFAMILY SSF46785 7 73 6.51E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS03150 0d012980f97e9ba4154bf24930871052 432 SMART SM00345 10 69 6.7E-18 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM393_RS03150 0d012980f97e9ba4154bf24930871052 432 SUPERFAMILY SSF53383 79 430 1.95E-61 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM393_RS03150 0d012980f97e9ba4154bf24930871052 432 Gene3D G3DSA:3.90.1150.10 315 432 1.9E-16 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM393_RS03150 0d012980f97e9ba4154bf24930871052 432 Pfam PF00392 Bacterial regulatory proteins, gntR family 7 69 5.4E-17 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM393_RS03150 0d012980f97e9ba4154bf24930871052 432 Gene3D G3DSA:3.40.640.10 109 314 2.1E-33 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM393_RS03230 2a95a14a7c941e2ee30f57f26bd4cd3f 219 TIGRFAM TIGR04502 microcomp_EutL: microcompartment protein EutL 6 217 1.4E-99 T 28-03-2018 IPR030983 Ethanolamine utilization protein EutL GO:0005198 AM393_RS03230 2a95a14a7c941e2ee30f57f26bd4cd3f 219 SUPERFAMILY SSF143414 159 211 1.83E-5 T 28-03-2018 AM393_RS03230 2a95a14a7c941e2ee30f57f26bd4cd3f 219 Pfam PF00936 BMC domain 36 107 2.9E-11 T 28-03-2018 IPR000249 Microcompartment protein, bacteria AM393_RS03230 2a95a14a7c941e2ee30f57f26bd4cd3f 219 Pfam PF00936 BMC domain 162 208 5.6E-6 T 28-03-2018 IPR000249 Microcompartment protein, bacteria AM393_RS03230 2a95a14a7c941e2ee30f57f26bd4cd3f 219 PIRSF PIRSF012290 1 219 1.2E-83 T 28-03-2018 IPR009193 Polyhedral organelle shell protein, EutL/PduB type GO:0009605 AM393_RS03230 2a95a14a7c941e2ee30f57f26bd4cd3f 219 SMART SM00877 35 132 2.8E-4 T 28-03-2018 IPR000249 Microcompartment protein, bacteria AM393_RS03230 2a95a14a7c941e2ee30f57f26bd4cd3f 219 SMART SM00877 142 219 4.0E-5 T 28-03-2018 IPR000249 Microcompartment protein, bacteria AM393_RS09380 40785a8282413070fe126dfd41e458ff 70 Gene3D G3DSA:2.40.50.140 2 70 2.1E-28 T 28-03-2018 AM393_RS09380 40785a8282413070fe126dfd41e458ff 70 PIRSF PIRSF002599 1 70 5.6E-26 T 28-03-2018 IPR012156 Cold shock, CspA GO:0003676 AM393_RS09380 40785a8282413070fe126dfd41e458ff 70 SMART SM00357 6 70 2.5E-31 T 28-03-2018 IPR011129 Cold shock domain GO:0003676 AM393_RS09380 40785a8282413070fe126dfd41e458ff 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 28-03-2018 IPR019844 Cold-shock conserved site AM393_RS09380 40785a8282413070fe126dfd41e458ff 70 PRINTS PR00050 Cold shock protein signature 7 22 5.8E-18 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM393_RS09380 40785a8282413070fe126dfd41e458ff 70 PRINTS PR00050 Cold shock protein signature 28 37 5.8E-18 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM393_RS09380 40785a8282413070fe126dfd41e458ff 70 PRINTS PR00050 Cold shock protein signature 43 61 5.8E-18 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM393_RS09380 40785a8282413070fe126dfd41e458ff 70 SUPERFAMILY SSF50249 4 69 3.94E-26 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM393_RS09380 40785a8282413070fe126dfd41e458ff 70 Pfam PF00313 'Cold-shock' DNA-binding domain 5 69 8.9E-33 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM393_RS09205 192a165ac83a38a0d2890ab91aaab25f 65 TIGRFAM TIGR03493 cellullose_BcsF: celllulose biosynthesis operon protein BcsF/YhjT 2 65 2.7E-33 T 28-03-2018 IPR019995 Cellulose biosynthesis, BcsF/YhjT AM393_RS09205 192a165ac83a38a0d2890ab91aaab25f 65 ProDom PD053231 YHJT MEMBRANE INNER BCSF 2 62 1.0E-17 T 28-03-2018 IPR019995 Cellulose biosynthesis, BcsF/YhjT AM393_RS09205 192a165ac83a38a0d2890ab91aaab25f 65 Pfam PF11120 Cellulose biosynthesis protein BcsF 2 60 3.1E-26 T 28-03-2018 IPR019995 Cellulose biosynthesis, BcsF/YhjT AM393_RS10100 389382ca918e85486876bd1be9936c6f 104 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 3 94 1.1E-17 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AM393_RS10100 389382ca918e85486876bd1be9936c6f 104 SUPERFAMILY SSF52794 1 101 7.85E-34 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AM393_RS10100 389382ca918e85486876bd1be9936c6f 104 Gene3D G3DSA:3.40.50.2300 2 104 1.3E-33 T 28-03-2018 AM393_RS18410 1abe5797788dd8d2b836f32a0b6a7f21 348 Pfam PF02562 PhoH-like protein 118 321 3.9E-95 T 28-03-2018 IPR003714 PhoH-like protein GO:0005524 AM393_RS18410 1abe5797788dd8d2b836f32a0b6a7f21 348 Gene3D G3DSA:3.40.50.300 114 321 3.1E-28 T 28-03-2018 AM393_RS18410 1abe5797788dd8d2b836f32a0b6a7f21 348 SUPERFAMILY SSF52540 117 318 7.02E-41 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS06635 3541d9201ff8c2f33466ccf6df9d3880 393 Pfam PF00155 Aminotransferase class I and II 57 389 3.5E-36 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AM393_RS06635 3541d9201ff8c2f33466ccf6df9d3880 393 Gene3D G3DSA:3.90.1150.10 300 393 2.3E-23 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM393_RS06635 3541d9201ff8c2f33466ccf6df9d3880 393 SUPERFAMILY SSF53383 5 391 6.54E-99 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM393_RS06635 3541d9201ff8c2f33466ccf6df9d3880 393 Gene3D G3DSA:3.40.640.10 46 299 2.6E-49 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM393_RS12180 db348486ba1da935f2ffbfe1477faa12 117 Hamap MF_01199 Anti-adapter protein IraM [iraM]. 1 111 27.919 T 28-03-2018 IPR014448 Anti-adapter protein IraM GO:0005737|GO:0006950 AM393_RS12180 db348486ba1da935f2ffbfe1477faa12 117 Pfam PF11183 Polymyxin resistance protein PmrD 1 76 5.5E-6 T 28-03-2018 AM393_RS17450 015a9fe6779ad7ee705d57ba15e480bc 505 Pfam PF02264 LamB porin 97 505 1.2E-103 T 28-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 AM393_RS17450 015a9fe6779ad7ee705d57ba15e480bc 505 Pfam PF11471 Maltoporin periplasmic N-terminal extension 2 55 9.3E-19 T 28-03-2018 IPR021570 LamB-type porin N-terminal domain AM393_RS17450 015a9fe6779ad7ee705d57ba15e480bc 505 SUPERFAMILY SSF56935 94 505 2.27E-142 T 28-03-2018 AM393_RS17450 015a9fe6779ad7ee705d57ba15e480bc 505 Gene3D G3DSA:2.40.170.10 98 505 3.0E-117 T 28-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 AM393_RS17450 015a9fe6779ad7ee705d57ba15e480bc 505 Gene3D G3DSA:1.20.5.50 17 97 5.2E-6 T 28-03-2018 AM393_RS17450 015a9fe6779ad7ee705d57ba15e480bc 505 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 101 501 0.0 T 28-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 AM393_RS17450 015a9fe6779ad7ee705d57ba15e480bc 505 SUPERFAMILY SSF57997 23 90 1.74E-6 T 28-03-2018 AM393_RS02880 52a56b480f1009df885b4e2fb2d586cc 662 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 118 244 4.4E-49 T 28-03-2018 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 AM393_RS02880 52a56b480f1009df885b4e2fb2d586cc 662 SUPERFAMILY SSF54373 472 548 7.46E-6 T 28-03-2018 AM393_RS02880 52a56b480f1009df885b4e2fb2d586cc 662 Hamap MF_01102 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC [mnmC]. 7 653 28.087 T 28-03-2018 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC GO:0004808|GO:0008033|GO:0008168|GO:0016645|GO:0055114 AM393_RS02880 52a56b480f1009df885b4e2fb2d586cc 662 TIGRFAM TIGR03197 MnmC_Cterm: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 267 658 4.0E-152 T 28-03-2018 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal GO:0008168|GO:0016645|GO:0055114 AM393_RS02880 52a56b480f1009df885b4e2fb2d586cc 662 Gene3D G3DSA:3.40.50.150 9 252 4.9E-83 T 28-03-2018 AM393_RS02880 52a56b480f1009df885b4e2fb2d586cc 662 SUPERFAMILY SSF53335 140 239 3.55E-5 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM393_RS02880 52a56b480f1009df885b4e2fb2d586cc 662 SUPERFAMILY SSF51905 567 655 9.06E-30 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS02880 52a56b480f1009df885b4e2fb2d586cc 662 SUPERFAMILY SSF51905 267 474 9.06E-30 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS02880 52a56b480f1009df885b4e2fb2d586cc 662 Gene3D G3DSA:3.50.50.60 254 662 4.4E-46 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS02880 52a56b480f1009df885b4e2fb2d586cc 662 Pfam PF01266 FAD dependent oxidoreductase 267 628 4.3E-49 T 28-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AM393_RS12240 73f7ffba98fba8688c9c0c450aa7b301 152 Pfam PF00376 MerR family regulatory protein 13 49 2.0E-14 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM393_RS12240 73f7ffba98fba8688c9c0c450aa7b301 152 SMART SM00422 12 80 8.1E-23 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM393_RS12240 73f7ffba98fba8688c9c0c450aa7b301 152 ProSitePatterns PS00552 MerR-type HTH domain signature. 15 37 - T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM393_RS12240 73f7ffba98fba8688c9c0c450aa7b301 152 Gene3D G3DSA:1.10.1660.10 67 142 6.1E-10 T 28-03-2018 AM393_RS12240 73f7ffba98fba8688c9c0c450aa7b301 152 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 24 37 1.2E-10 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM393_RS12240 73f7ffba98fba8688c9c0c450aa7b301 152 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 47 67 1.2E-10 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM393_RS12240 73f7ffba98fba8688c9c0c450aa7b301 152 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 24 1.2E-10 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM393_RS12240 73f7ffba98fba8688c9c0c450aa7b301 152 Gene3D G3DSA:1.10.1660.10 8 66 9.2E-19 T 28-03-2018 AM393_RS12240 73f7ffba98fba8688c9c0c450aa7b301 152 SUPERFAMILY SSF46955 12 134 1.39E-27 T 28-03-2018 IPR009061 Putative DNA-binding domain AM393_RS12240 73f7ffba98fba8688c9c0c450aa7b301 152 Pfam PF09278 MerR, DNA binding 55 119 3.2E-14 T 28-03-2018 IPR015358 Transcription regulator MerR, DNA binding AM393_RS12240 73f7ffba98fba8688c9c0c450aa7b301 152 TIGRFAM TIGR01950 SoxR: redox-sensitive transcriptional activator SoxR 12 152 5.9E-73 T 28-03-2018 IPR010211 Redox-sensitive transcriptional activator SoxR GO:0003677|GO:0006355|GO:0006979|GO:0051537 AM393_RS25775 b8cd020cb9ea938a4e62b46a51cf2b69 159 Gene3D G3DSA:3.30.1330.40 1 158 1.0E-32 T 28-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AM393_RS25775 b8cd020cb9ea938a4e62b46a51cf2b69 159 Pfam PF01042 Endoribonuclease L-PSP 9 147 3.7E-13 T 28-03-2018 IPR006175 YjgF/YER057c/UK114 family AM393_RS25775 b8cd020cb9ea938a4e62b46a51cf2b69 159 SUPERFAMILY SSF55298 6 146 2.67E-23 T 28-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AM393_RS13635 1f547160e762c2dc60697cd921c63275 115 PIRSF PIRSF002599 9 112 5.9E-19 T 28-03-2018 IPR012156 Cold shock, CspA GO:0003676 AM393_RS13635 1f547160e762c2dc60697cd921c63275 115 Pfam PF06961 Protein of unknown function (DUF1294) 33 87 1.8E-23 T 28-03-2018 IPR010718 Protein of unknown function DUF1294 AM393_RS21565 e8c4026a1a0c6386f717f74acd7f00cf 212 Pfam PF03922 OmpW family 23 212 1.3E-70 T 28-03-2018 IPR005618 Outer membrane protein, OmpW GO:0019867 AM393_RS21565 e8c4026a1a0c6386f717f74acd7f00cf 212 Gene3D G3DSA:2.40.160.20 22 212 9.4E-36 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AM393_RS21565 e8c4026a1a0c6386f717f74acd7f00cf 212 SUPERFAMILY SSF56925 23 212 1.91E-26 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AM393_RS14735 62f42862798b23db60bbb9b42eec9b81 404 Gene3D G3DSA:1.20.1250.20 192 387 3.5E-12 T 28-03-2018 AM393_RS14735 62f42862798b23db60bbb9b42eec9b81 404 SUPERFAMILY SSF103473 9 390 8.24E-40 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS14735 62f42862798b23db60bbb9b42eec9b81 404 ProSitePatterns PS00216 Sugar transport proteins signature 1. 61 77 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM393_RS14735 62f42862798b23db60bbb9b42eec9b81 404 Gene3D G3DSA:1.20.1250.20 2 191 1.8E-25 T 28-03-2018 AM393_RS14735 62f42862798b23db60bbb9b42eec9b81 404 Pfam PF07690 Major Facilitator Superfamily 13 311 1.1E-23 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS14415 fb37fc310752a2b7e99d7f5767d90174 391 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 7 380 1.5E-186 T 28-03-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 AM393_RS14415 fb37fc310752a2b7e99d7f5767d90174 391 Pfam PF06965 Na+/H+ antiporter 1 6 380 4.0E-150 T 28-03-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 AM393_RS14415 fb37fc310752a2b7e99d7f5767d90174 391 Gene3D G3DSA:1.20.1530.10 2 386 5.0E-154 T 28-03-2018 IPR023171 Na/H antiporter domain AM393_RS14415 fb37fc310752a2b7e99d7f5767d90174 391 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 4 388 23.826 T 28-03-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 AM393_RS25135 b2f80630c2cc7629a18cf2f8a864c898 532 SUPERFAMILY SSF53850 27 523 5.79E-149 T 28-03-2018 AM393_RS25135 b2f80630c2cc7629a18cf2f8a864c898 532 PIRSF PIRSF002741 5 532 4.6E-111 T 28-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AM393_RS25135 b2f80630c2cc7629a18cf2f8a864c898 532 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 72 452 9.2E-95 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain AM393_RS25135 b2f80630c2cc7629a18cf2f8a864c898 532 Gene3D G3DSA:3.10.105.10 298 502 3.5E-64 T 28-03-2018 AM393_RS25135 b2f80630c2cc7629a18cf2f8a864c898 532 Gene3D G3DSA:3.90.76.10 36 201 1.4E-35 T 28-03-2018 AM393_RS25135 b2f80630c2cc7629a18cf2f8a864c898 532 Gene3D G3DSA:3.40.190.10 202 297 2.5E-24 T 28-03-2018 AM393_RS21000 5fae92913d9365308c73bea815885bd3 107 SUPERFAMILY SSF54909 1 98 1.49E-24 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel AM393_RS21000 5fae92913d9365308c73bea815885bd3 107 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 76 1.2E-13 T 28-03-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain AM393_RS21000 5fae92913d9365308c73bea815885bd3 107 Gene3D G3DSA:3.30.70.100 1 94 3.9E-20 T 28-03-2018 AM393_RS11930 2366b09e3faa6f492021e7d61afb97b8 135 Gene3D G3DSA:3.40.50.510 1 132 6.5E-23 T 28-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 AM393_RS11930 2366b09e3faa6f492021e7d61afb97b8 135 Pfam PF03610 PTS system fructose IIA component 7 113 4.9E-14 T 28-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 AM393_RS11930 2366b09e3faa6f492021e7d61afb97b8 135 TIGRFAM TIGR00824 EIIA-man: PTS system, mannose/fructose/sorbose family, IIA component 1 114 2.6E-50 T 28-03-2018 IPR013789 Phosphotransferase system, mannose family IIA component GO:0005737|GO:0008643|GO:0016773 AM393_RS11930 2366b09e3faa6f492021e7d61afb97b8 135 SUPERFAMILY SSF53062 1 125 1.05E-27 T 28-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 AM393_RS14395 62433e21a4f17afa46cb0e3e23e65e7b 241 Pfam PF13099 Domain of unknown function (DUF3944) 5 39 8.3E-17 T 28-03-2018 IPR025217 Domain of unknown function DUF3944 AM393_RS14395 62433e21a4f17afa46cb0e3e23e65e7b 241 Pfam PF03981 Ubiquinol-cytochrome C chaperone 59 212 2.2E-15 T 28-03-2018 IPR021150 Ubiquinol-cytochrome c chaperone/UPF0174 AM393_RS00155 3b5ee6b75e0ccbf4481265ce612f70b9 239 Pfam PF00005 ABC transporter 21 165 7.8E-31 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS00155 3b5ee6b75e0ccbf4481265ce612f70b9 239 SMART SM00382 30 216 3.6E-5 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS00155 3b5ee6b75e0ccbf4481265ce612f70b9 239 SUPERFAMILY SSF52540 4 235 8.43E-61 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS00155 3b5ee6b75e0ccbf4481265ce612f70b9 239 Gene3D G3DSA:3.40.50.300 2 236 1.4E-56 T 28-03-2018 AM393_RS00155 3b5ee6b75e0ccbf4481265ce612f70b9 239 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS19595 e1468b42ad54b8a32431666521b922f0 199 Pfam PF09684 Phage tail protein (Tail_P2_I) 6 142 8.9E-48 T 28-03-2018 IPR006521 Tail protein I AM393_RS19595 e1468b42ad54b8a32431666521b922f0 199 TIGRFAM TIGR01634 tail_P2_I: phage tail protein I 6 142 5.2E-50 T 28-03-2018 IPR006521 Tail protein I AM393_RS22780 e933eecdc49339c926fc14a76c15d7ab 341 TIGRFAM TIGR03244 arg_catab_AstA: arginine N-succinyltransferase 3 332 5.9E-137 T 28-03-2018 IPR017650 Arginine N-succinyltransferase GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 AM393_RS22780 e933eecdc49339c926fc14a76c15d7ab 341 SUPERFAMILY SSF55729 2 332 1.15E-122 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM393_RS22780 e933eecdc49339c926fc14a76c15d7ab 341 TIGRFAM TIGR03243 arg_catab_AOST: arginine and ornithine succinyltransferase subunits 3 331 2.8E-132 T 28-03-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 AM393_RS22780 e933eecdc49339c926fc14a76c15d7ab 341 Pfam PF04958 Arginine N-succinyltransferase beta subunit 2 330 2.0E-132 T 28-03-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 AM393_RS22780 e933eecdc49339c926fc14a76c15d7ab 341 Gene3D G3DSA:2.40.40.20 279 332 2.8E-9 T 28-03-2018 AM393_RS22780 e933eecdc49339c926fc14a76c15d7ab 341 Gene3D G3DSA:3.40.630.30 1 260 6.2E-22 T 28-03-2018 AM393_RS09255 76c720d605b40e044e6fc74a2df59667 337 Pfam PF00005 ABC transporter 38 189 8.0E-32 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS09255 76c720d605b40e044e6fc74a2df59667 337 Gene3D G3DSA:3.40.50.300 9 337 8.5E-78 T 28-03-2018 AM393_RS09255 76c720d605b40e044e6fc74a2df59667 337 ProSitePatterns PS00211 ABC transporters family signature. 162 176 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS09255 76c720d605b40e044e6fc74a2df59667 337 SMART SM00382 47 239 4.4E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS09255 76c720d605b40e044e6fc74a2df59667 337 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 240 324 3.0E-25 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AM393_RS09255 76c720d605b40e044e6fc74a2df59667 337 SUPERFAMILY SSF52540 13 261 2.48E-72 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS09255 76c720d605b40e044e6fc74a2df59667 337 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 241 306 6.8E-19 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AM393_RS00350 e14240bba07d165f3c521a034d8a7176 561 Gene3D G3DSA:3.40.50.980 217 371 2.8E-39 T 28-03-2018 AM393_RS00350 e14240bba07d165f3c521a034d8a7176 561 Pfam PF00501 AMP-binding enzyme 29 460 1.5E-114 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AM393_RS00350 e14240bba07d165f3c521a034d8a7176 561 Gene3D G3DSA:3.40.50.980 20 216 5.4E-44 T 28-03-2018 AM393_RS00350 e14240bba07d165f3c521a034d8a7176 561 Gene3D G3DSA:2.30.38.10 372 453 1.4E-29 T 28-03-2018 AM393_RS00350 e14240bba07d165f3c521a034d8a7176 561 Gene3D G3DSA:3.30.300.30 455 560 1.1E-26 T 28-03-2018 AM393_RS00350 e14240bba07d165f3c521a034d8a7176 561 ProSitePatterns PS00455 Putative AMP-binding domain signature. 211 222 - T 28-03-2018 IPR020845 AMP-binding, conserved site AM393_RS00350 e14240bba07d165f3c521a034d8a7176 561 SUPERFAMILY SSF56801 15 555 3.4E-155 T 28-03-2018 AM393_RS00350 e14240bba07d165f3c521a034d8a7176 561 Pfam PF13193 AMP-binding enzyme C-terminal domain 469 543 3.6E-16 T 28-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain AM393_RS10135 74860e7fe0248a1c786815b75a24b613 337 SUPERFAMILY SSF53850 25 331 3.99E-53 T 28-03-2018 AM393_RS10135 74860e7fe0248a1c786815b75a24b613 337 Gene3D G3DSA:3.40.190.10 15 136 2.9E-9 T 28-03-2018 AM393_RS10135 74860e7fe0248a1c786815b75a24b613 337 Pfam PF01547 Bacterial extracellular solute-binding protein 38 276 4.3E-25 T 28-03-2018 IPR006059 Solute-binding family 1 GO:0006810 AM393_RS10135 74860e7fe0248a1c786815b75a24b613 337 TIGRFAM TIGR03227 PhnS: 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein 2 335 1.2E-154 T 28-03-2018 IPR017637 Putative 2-aminoethylphosphonate binding protein, ABC transporter AM393_RS10135 74860e7fe0248a1c786815b75a24b613 337 Gene3D G3DSA:3.40.190.10 137 335 8.9E-25 T 28-03-2018 AM393_RS09090 50d26dfbaa96750b2b5fe2402f5ea19d 280 SUPERFAMILY SSF53335 9 279 4.15E-99 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM393_RS09090 50d26dfbaa96750b2b5fe2402f5ea19d 280 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 241 247 - T 28-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AM393_RS09090 50d26dfbaa96750b2b5fe2402f5ea19d 280 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 2 266 41.998 T 28-03-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 AM393_RS09090 50d26dfbaa96750b2b5fe2402f5ea19d 280 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 33 278 3.9E-117 T 28-03-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 AM393_RS09090 50d26dfbaa96750b2b5fe2402f5ea19d 280 Gene3D G3DSA:3.40.50.150 1 280 3.2E-91 T 28-03-2018 AM393_RS21945 562fe5dc97702f8046d63c60b981556c 289 PRINTS PR00069 Aldo-keto reductase signature 159 188 9.6E-39 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM393_RS21945 562fe5dc97702f8046d63c60b981556c 289 PRINTS PR00069 Aldo-keto reductase signature 198 222 9.6E-39 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM393_RS21945 562fe5dc97702f8046d63c60b981556c 289 PRINTS PR00069 Aldo-keto reductase signature 96 114 9.6E-39 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM393_RS21945 562fe5dc97702f8046d63c60b981556c 289 PRINTS PR00069 Aldo-keto reductase signature 35 59 9.6E-39 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM393_RS21945 562fe5dc97702f8046d63c60b981556c 289 PRINTS PR00069 Aldo-keto reductase signature 125 142 9.6E-39 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM393_RS21945 562fe5dc97702f8046d63c60b981556c 289 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 39 56 - T 28-03-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 AM393_RS21945 562fe5dc97702f8046d63c60b981556c 289 Pfam PF00248 Aldo/keto reductase family 21 262 1.2E-37 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM393_RS21945 562fe5dc97702f8046d63c60b981556c 289 PIRSF PIRSF000097 113 280 3.1E-41 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM393_RS21945 562fe5dc97702f8046d63c60b981556c 289 PIRSF PIRSF000097 2 117 5.7E-36 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM393_RS21945 562fe5dc97702f8046d63c60b981556c 289 Gene3D G3DSA:3.20.20.100 1 275 1.7E-81 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM393_RS21945 562fe5dc97702f8046d63c60b981556c 289 SUPERFAMILY SSF51430 5 265 1.15E-76 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM393_RS24200 24592e8ee76fc5307c79aff303eef96a 88 Gene3D G3DSA:3.40.50.2300 1 87 5.7E-22 T 28-03-2018 AM393_RS24200 24592e8ee76fc5307c79aff303eef96a 88 SUPERFAMILY SSF52794 1 86 2.62E-21 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AM393_RS24200 24592e8ee76fc5307c79aff303eef96a 88 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 3 85 4.7E-17 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AM393_RS15730 a35c2e0245eacd9aa49721a5a1329f9f 420 Pfam PF03611 PTS system sugar-specific permease component 7 380 1.2E-65 T 28-03-2018 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 AM393_RS15730 a35c2e0245eacd9aa49721a5a1329f9f 420 PIRSF PIRSF006304 1 419 1.7E-138 T 28-03-2018 IPR013853 Galactitol permease IIC component GO:0015577|GO:0015796 AM393_RS22660 8ea7f9d2a391350a87c7d491f08787a1 95 TIGRFAM TIGR02157 PA_CoA_Oxy2: phenylacetate-CoA oxygenase, PaaH subunit 6 95 3.3E-49 T 28-03-2018 IPR009359 Phenylacetic acid degradation B AM393_RS22660 8ea7f9d2a391350a87c7d491f08787a1 95 PIRSF PIRSF030200 1 95 1.0E-43 T 28-03-2018 IPR009359 Phenylacetic acid degradation B AM393_RS22660 8ea7f9d2a391350a87c7d491f08787a1 95 Pfam PF06243 Phenylacetic acid degradation B 6 91 1.1E-39 T 28-03-2018 IPR009359 Phenylacetic acid degradation B AM393_RS10565 fe7cf9c5a209bccb48cfffe4807f120d 482 Pfam PF05762 VWA domain containing CoxE-like protein 308 457 2.1E-10 T 28-03-2018 IPR008912 Uncharacterised protein family CoxE-like AM393_RS10565 fe7cf9c5a209bccb48cfffe4807f120d 482 SUPERFAMILY SSF53300 317 454 5.13E-18 T 28-03-2018 IPR002035 von Willebrand factor, type A AM393_RS10565 fe7cf9c5a209bccb48cfffe4807f120d 482 Gene3D G3DSA:3.40.50.410 298 461 1.5E-20 T 28-03-2018 IPR002035 von Willebrand factor, type A AM393_RS10565 fe7cf9c5a209bccb48cfffe4807f120d 482 Hamap MF_01626 Protein ViaA [viaA]. 1 482 56.384 T 28-03-2018 IPR023481 Uncharacterised protein family ViaA AM393_RS10565 fe7cf9c5a209bccb48cfffe4807f120d 482 SMART SM00327 318 482 1.3E-6 T 28-03-2018 IPR002035 von Willebrand factor, type A AM393_RS06170 70648799e9662931ac2409f63e41e6d3 316 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 124 296 3.5E-79 T 28-03-2018 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 AM393_RS06170 70648799e9662931ac2409f63e41e6d3 316 TIGRFAM TIGR01380 glut_syn: glutathione synthase 2 312 3.2E-139 T 28-03-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 AM393_RS06170 70648799e9662931ac2409f63e41e6d3 316 SUPERFAMILY SSF56059 123 314 1.04E-58 T 28-03-2018 AM393_RS06170 70648799e9662931ac2409f63e41e6d3 316 Gene3D G3DSA:3.30.1490.20 138 191 1.0E-22 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AM393_RS06170 70648799e9662931ac2409f63e41e6d3 316 Gene3D G3DSA:3.40.50.20 2 129 9.3E-53 T 28-03-2018 AM393_RS06170 70648799e9662931ac2409f63e41e6d3 316 Gene3D G3DSA:3.30.470.20 192 300 6.9E-16 T 28-03-2018 AM393_RS06170 70648799e9662931ac2409f63e41e6d3 316 Hamap MF_00162 Glutathione synthetase [gshB]. 1 316 182.496 T 28-03-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 AM393_RS06170 70648799e9662931ac2409f63e41e6d3 316 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 2 120 1.5E-47 T 28-03-2018 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 AM393_RS06170 70648799e9662931ac2409f63e41e6d3 316 SUPERFAMILY SSF52440 2 122 1.52E-46 T 28-03-2018 IPR016185 Pre-ATP-grasp domain AM393_RS12970 ef115ea96b4fb30be42bedb5c91511a1 274 Pfam PF02311 AraC-like ligand binding domain 24 150 5.3E-23 T 28-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AM393_RS12970 ef115ea96b4fb30be42bedb5c91511a1 274 SUPERFAMILY SSF46689 222 271 1.7E-9 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS12970 ef115ea96b4fb30be42bedb5c91511a1 274 SUPERFAMILY SSF51215 32 139 8.76E-18 T 28-03-2018 AM393_RS12970 ef115ea96b4fb30be42bedb5c91511a1 274 SUPERFAMILY SSF46689 170 219 9.41E-12 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS12970 ef115ea96b4fb30be42bedb5c91511a1 274 Gene3D G3DSA:1.10.10.60 228 274 1.3E-11 T 28-03-2018 AM393_RS12970 ef115ea96b4fb30be42bedb5c91511a1 274 Gene3D G3DSA:1.10.10.60 187 227 2.7E-11 T 28-03-2018 AM393_RS12970 ef115ea96b4fb30be42bedb5c91511a1 274 Gene3D G3DSA:2.60.120.280 10 186 7.7E-14 T 28-03-2018 AM393_RS12970 ef115ea96b4fb30be42bedb5c91511a1 274 SMART SM00342 186 268 8.5E-26 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM393_RS12970 ef115ea96b4fb30be42bedb5c91511a1 274 Pfam PF12833 Helix-turn-helix domain 192 269 2.6E-20 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM393_RS25770 8983794cf6bd1c0b22baa3ef4ed9ab4a 427 SUPERFAMILY SSF51556 71 360 2.27E-57 T 28-03-2018 IPR032466 Metal-dependent hydrolase AM393_RS25770 8983794cf6bd1c0b22baa3ef4ed9ab4a 427 SUPERFAMILY SSF51338 31 83 7.97E-6 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM393_RS25770 8983794cf6bd1c0b22baa3ef4ed9ab4a 427 Gene3D G3DSA:3.20.20.140 80 395 3.6E-24 T 28-03-2018 AM393_RS25770 8983794cf6bd1c0b22baa3ef4ed9ab4a 427 Gene3D G3DSA:2.30.40.10 14 79 1.4E-7 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM393_RS04055 c15b7ef6ef1ff7bfd3dba817d12e13a6 266 SUPERFAMILY SSF81301 7 95 8.18E-8 T 28-03-2018 AM393_RS04055 c15b7ef6ef1ff7bfd3dba817d12e13a6 266 Gene3D G3DSA:3.30.460.10 15 150 7.6E-18 T 28-03-2018 AM393_RS04055 c15b7ef6ef1ff7bfd3dba817d12e13a6 266 Gene3D G3DSA:1.20.120.330 151 260 2.4E-11 T 28-03-2018 AM393_RS07160 1af47875f439cf47c12bb5f276666606 200 Gene3D G3DSA:1.10.260.40 13 77 1.6E-15 T 28-03-2018 AM393_RS07160 1af47875f439cf47c12bb5f276666606 200 SMART SM00530 25 80 8.1E-13 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM393_RS07160 1af47875f439cf47c12bb5f276666606 200 SUPERFAMILY SSF47413 20 84 7.51E-15 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM393_RS07160 1af47875f439cf47c12bb5f276666606 200 Gene3D G3DSA:2.60.120.10 78 194 7.5E-13 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AM393_RS07160 1af47875f439cf47c12bb5f276666606 200 SUPERFAMILY SSF51182 66 194 2.98E-17 T 28-03-2018 IPR011051 RmlC-like cupin domain AM393_RS07160 1af47875f439cf47c12bb5f276666606 200 Pfam PF01381 Helix-turn-helix 26 79 6.9E-11 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM393_RS07160 1af47875f439cf47c12bb5f276666606 200 Pfam PF07883 Cupin domain 125 193 6.9E-12 T 28-03-2018 IPR013096 Cupin 2, conserved barrel AM393_RS17540 545c7697f2a7274b0785d4bfed72677d 395 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 177 365 9.0E-9 T 28-03-2018 AM393_RS17540 545c7697f2a7274b0785d4bfed72677d 395 Pfam PF04055 Radical SAM superfamily 31 197 1.7E-14 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AM393_RS17540 545c7697f2a7274b0785d4bfed72677d 395 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 276 351 4.0E-15 T 28-03-2018 IPR023885 4Fe4S-binding SPASM domain AM393_RS17540 545c7697f2a7274b0785d4bfed72677d 395 TIGRFAM TIGR03942 sulfatase_rSAM: anaerobic sulfatase maturase 25 371 1.1E-122 T 28-03-2018 IPR023867 Anaerobic sulphatase maturase, radical SAM GO:0016491 AM393_RS17540 545c7697f2a7274b0785d4bfed72677d 395 SUPERFAMILY SSF102114 23 344 6.41E-38 T 28-03-2018 AM393_RS17540 545c7697f2a7274b0785d4bfed72677d 395 Gene3D G3DSA:3.20.20.70 23 344 4.4E-35 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM393_RS15215 8ba48739b240d0d9e84ec13b29e890be 124 Pfam PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) 15 118 4.7E-34 T 28-03-2018 IPR019114 Chaperone lipoprotein, PulS/OutS-like AM393_RS15215 8ba48739b240d0d9e84ec13b29e890be 124 TIGRFAM TIGR01004 PulS_OutS: lipoprotein, PulS/OutS family 5 123 8.5E-54 T 28-03-2018 IPR005699 Chaperone lipoprotein, PulS/OutS GO:0006886|GO:0008565 AM393_RS20495 109f235ec0f9fc544e5a4ed2f9ff6ff1 394 Pfam PF07670 Nucleoside recognition 92 190 1.5E-6 T 28-03-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 AM393_RS20495 109f235ec0f9fc544e5a4ed2f9ff6ff1 394 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 10 82 2.7E-18 T 28-03-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 AM393_RS20495 109f235ec0f9fc544e5a4ed2f9ff6ff1 394 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 193 392 2.6E-55 T 28-03-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 AM393_RS25230 0fab70dd0b11ebb6aad7720d5d254544 653 ProSitePatterns PS01276 Peptidase family U32 signature. 161 179 - T 28-03-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 AM393_RS25230 0fab70dd0b11ebb6aad7720d5d254544 653 Pfam PF12392 Collagenase 391 504 1.9E-18 T 28-03-2018 IPR020988 Peptidase U32, collagenase AM393_RS25230 0fab70dd0b11ebb6aad7720d5d254544 653 Gene3D G3DSA:3.20.20.70 5 275 1.3E-6 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM393_RS25230 0fab70dd0b11ebb6aad7720d5d254544 653 Pfam PF01136 Peptidase family U32 79 305 4.9E-71 T 28-03-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 AM393_RS19070 d2358b7eca34b4d9c7768ea8febcc552 162 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase accessory protein [moaC]. 2 158 36.565 T 28-03-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 Reactome: R-HSA-947581 AM393_RS19070 d2358b7eca34b4d9c7768ea8febcc552 162 Gene3D G3DSA:3.30.70.640 2 158 3.6E-68 T 28-03-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 Reactome: R-HSA-947581 AM393_RS19070 d2358b7eca34b4d9c7768ea8febcc552 162 SUPERFAMILY SSF55040 11 155 1.57E-61 T 28-03-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 Reactome: R-HSA-947581 AM393_RS19070 d2358b7eca34b4d9c7768ea8febcc552 162 Pfam PF01967 MoaC family 15 150 1.2E-54 T 28-03-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 Reactome: R-HSA-947581 AM393_RS19070 d2358b7eca34b4d9c7768ea8febcc552 162 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 4 152 2.0E-72 T 28-03-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 Reactome: R-HSA-947581 AM393_RS26105 feb84be9f68c4cefe3c1af2affc2fb26 317 Gene3D G3DSA:3.40.50.1980 136 314 7.6E-23 T 28-03-2018 AM393_RS26105 feb84be9f68c4cefe3c1af2affc2fb26 317 SUPERFAMILY SSF53807 17 297 1.49E-39 T 28-03-2018 AM393_RS26105 feb84be9f68c4cefe3c1af2affc2fb26 317 Gene3D G3DSA:3.40.50.1980 20 135 1.0E-21 T 28-03-2018 AM393_RS26105 feb84be9f68c4cefe3c1af2affc2fb26 317 Pfam PF01497 Periplasmic binding protein 97 260 1.8E-18 T 28-03-2018 IPR002491 ABC transporter periplasmic binding domain GO:0005488 AM393_RS18155 6c76b206a95a14c2a9ae1627d2792aa0 342 Gene3D G3DSA:3.40.50.720 114 313 1.8E-56 T 28-03-2018 AM393_RS18155 6c76b206a95a14c2a9ae1627d2792aa0 342 Gene3D G3DSA:3.40.50.720 1 113 3.7E-26 T 28-03-2018 AM393_RS18155 6c76b206a95a14c2a9ae1627d2792aa0 342 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 108 310 3.3E-55 T 28-03-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AM393_RS18155 6c76b206a95a14c2a9ae1627d2792aa0 342 SUPERFAMILY SSF52283 29 132 4.25E-24 T 28-03-2018 AM393_RS18155 6c76b206a95a14c2a9ae1627d2792aa0 342 SUPERFAMILY SSF51735 99 131 9.51E-52 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS18155 6c76b206a95a14c2a9ae1627d2792aa0 342 SUPERFAMILY SSF51735 158 311 9.51E-52 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS18155 6c76b206a95a14c2a9ae1627d2792aa0 342 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 33 337 5.9E-19 T 28-03-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 AM393_RS06380 f35eb161d79dcb344ad7c3a93640c57b 131 Pfam PF07511 Protein of unknown function (DUF1525) 19 125 3.6E-34 T 28-03-2018 IPR011090 Integrating conjugative element protein, PFL4709 AM393_RS06380 f35eb161d79dcb344ad7c3a93640c57b 131 TIGRFAM TIGR03757 conj_TIGR03757: integrating conjugative element protein, PFL_4709 family 19 128 1.3E-36 T 28-03-2018 IPR011090 Integrating conjugative element protein, PFL4709 AM393_RS27155 8e1cfdce404175ad9d8accabb43f5276 359 SUPERFAMILY SSF53098 173 330 2.66E-30 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM393_RS27155 8e1cfdce404175ad9d8accabb43f5276 359 Pfam PF00665 Integrase core domain 177 287 9.7E-18 T 28-03-2018 IPR001584 Integrase, catalytic core GO:0015074 AM393_RS27155 8e1cfdce404175ad9d8accabb43f5276 359 Gene3D G3DSA:3.30.420.10 168 355 3.3E-33 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM393_RS27155 8e1cfdce404175ad9d8accabb43f5276 359 Pfam PF13518 Helix-turn-helix domain 41 81 1.8E-8 T 28-03-2018 AM393_RS27155 8e1cfdce404175ad9d8accabb43f5276 359 Gene3D G3DSA:1.10.10.60 28 117 4.9E-5 T 28-03-2018 AM393_RS27155 8e1cfdce404175ad9d8accabb43f5276 359 SUPERFAMILY SSF46689 36 137 5.38E-8 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS20610 89511e6b906b0a3861253bff17422525 842 Gene3D G3DSA:3.90.550.10 223 502 1.9E-19 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM393_RS20610 89511e6b906b0a3861253bff17422525 842 SUPERFAMILY SSF53448 244 532 3.75E-26 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM393_RS20610 89511e6b906b0a3861253bff17422525 842 Hamap MF_01072 Glucans biosynthesis glucosyltransferase H [mdoH]. 63 745 51.778 T 28-03-2018 IPR023725 Glucan biosynthesis glucosyltransferase H GO:0016758 AM393_RS20610 89511e6b906b0a3861253bff17422525 842 Pfam PF00535 Glycosyl transferase family 2 246 428 6.6E-23 T 28-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AM393_RS03480 e0456afb0bfd236faea8f4be1c8cdbfd 410 Gene3D G3DSA:1.20.1250.20 8 198 6.1E-15 T 28-03-2018 AM393_RS03480 e0456afb0bfd236faea8f4be1c8cdbfd 410 Pfam PF07690 Major Facilitator Superfamily 25 285 9.4E-14 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS03480 e0456afb0bfd236faea8f4be1c8cdbfd 410 Gene3D G3DSA:1.20.1250.20 206 392 1.5E-7 T 28-03-2018 AM393_RS03480 e0456afb0bfd236faea8f4be1c8cdbfd 410 SUPERFAMILY SSF103473 19 382 2.62E-30 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS23340 da1c04d894433158598e5a219ccf82b2 405 Pfam PF00563 EAL domain 171 386 5.6E-46 T 28-03-2018 IPR001633 EAL domain AM393_RS23340 da1c04d894433158598e5a219ccf82b2 405 SUPERFAMILY SSF141868 168 386 2.62E-54 T 28-03-2018 IPR001633 EAL domain AM393_RS23340 da1c04d894433158598e5a219ccf82b2 405 SUPERFAMILY SSF54975 1 131 1.44E-31 T 28-03-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 AM393_RS23340 da1c04d894433158598e5a219ccf82b2 405 SMART SM01034 2 94 5.3E-38 T 28-03-2018 IPR007024 BLUF domain GO:0009882|GO:0071949 AM393_RS23340 da1c04d894433158598e5a219ccf82b2 405 Pfam PF04940 Sensors of blue-light using FAD 2 92 9.7E-23 T 28-03-2018 IPR007024 BLUF domain GO:0009882|GO:0071949 AM393_RS23340 da1c04d894433158598e5a219ccf82b2 405 SMART SM00052 146 391 1.4E-38 T 28-03-2018 IPR001633 EAL domain AM393_RS23340 da1c04d894433158598e5a219ccf82b2 405 Gene3D G3DSA:3.20.20.450 151 389 2.0E-57 T 28-03-2018 IPR001633 EAL domain AM393_RS10935 094ff8a587ba48fb9fbfbc59397967e8 224 Pfam PF03473 MOSC domain 47 158 4.6E-21 T 28-03-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 AM393_RS10935 094ff8a587ba48fb9fbfbc59397967e8 224 Pfam PF03475 3-alpha domain 169 212 2.6E-12 T 28-03-2018 IPR005163 3-alpha domain AM393_RS10935 094ff8a587ba48fb9fbfbc59397967e8 224 SUPERFAMILY SSF50800 2 223 1.31E-74 T 28-03-2018 IPR011037 Pyruvate kinase-like, insert domain AM393_RS10935 094ff8a587ba48fb9fbfbc59397967e8 224 Gene3D G3DSA:2.40.33.20 1 224 1.0E-48 T 28-03-2018 AM393_RS10880 ed6a5eb6b4f7f96bc4fdeb5cdec37528 334 Gene3D G3DSA:1.10.3470.10 11 311 3.1E-26 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AM393_RS10880 ed6a5eb6b4f7f96bc4fdeb5cdec37528 334 Pfam PF02653 Branched-chain amino acid transport system / permease component 37 305 2.6E-42 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AM393_RS14130 6e5225631c17c8f8af1f91cb924e654e 447 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 20 434 5.1E-111 T 28-03-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 AM393_RS14130 6e5225631c17c8f8af1f91cb924e654e 447 Pfam PF02378 Phosphotransferase system, EIIC 36 359 2.0E-56 T 28-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AM393_RS14130 6e5225631c17c8f8af1f91cb924e654e 447 PIRSF PIRSF006351 9 443 1.9E-140 T 28-03-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 AM393_RS01285 dd4beac794ae1cb90c8b1e561e06d89d 61 Gene3D G3DSA:1.10.10.10 6 61 7.5E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS01285 dd4beac794ae1cb90c8b1e561e06d89d 61 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 5 54 2.0E-25 T 28-03-2018 IPR010260 DNA-binding transcriptional activator AlpA AM393_RS12695 144ef1de752b86c62b23a3ae3d389977 119 Pfam PF02313 Fumarate reductase subunit D 6 117 5.4E-51 T 28-03-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 AM393_RS12695 144ef1de752b86c62b23a3ae3d389977 119 PIRSF PIRSF000179 1 119 1.9E-52 T 28-03-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 AM393_RS12695 144ef1de752b86c62b23a3ae3d389977 119 SUPERFAMILY SSF81343 1 119 1.87E-52 T 28-03-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM393_RS12695 144ef1de752b86c62b23a3ae3d389977 119 ProDom PD015693 FUMARATE MEMBRANE REDUCTASE D SUBUNIT INNER TRANSMEMBRANE HYDROPHOBIC REDUCTASE POLYPEPTIDE 1 119 2.0E-48 T 28-03-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 AM393_RS12695 144ef1de752b86c62b23a3ae3d389977 119 Hamap MF_00709 Fumarate reductase subunit D [frdD]. 2 119 26.747 T 28-03-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 AM393_RS12695 144ef1de752b86c62b23a3ae3d389977 119 Gene3D G3DSA:1.20.1300.10 1 119 2.1E-30 T 28-03-2018 AM393_RS23360 56b46f24d299e9dab2ef9cdd1243cab9 454 PIRSF PIRSF002746 1 454 1.0E-136 T 28-03-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 AM393_RS23360 56b46f24d299e9dab2ef9cdd1243cab9 454 Pfam PF02447 GntP family permease 6 450 1.1E-128 T 28-03-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 AM393_RS23360 56b46f24d299e9dab2ef9cdd1243cab9 454 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 6 451 1.8E-101 T 28-03-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 AM393_RS25530 a4a0762e5ec474b3c9a5838a8b866b4a 115 Pfam PF00462 Glutaredoxin 17 81 1.1E-18 T 28-03-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 AM393_RS25530 a4a0762e5ec474b3c9a5838a8b866b4a 115 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 5 101 4.5E-47 T 28-03-2018 IPR004480 Monothiol glutaredoxin-related AM393_RS25530 a4a0762e5ec474b3c9a5838a8b866b4a 115 SUPERFAMILY SSF52833 1 104 1.12E-35 T 28-03-2018 IPR012336 Thioredoxin-like fold AM393_RS25530 a4a0762e5ec474b3c9a5838a8b866b4a 115 PIRSF PIRSF005894 1 108 1.8E-52 T 28-03-2018 IPR014434 Monothiol glutaredoxin GO:0015036 Reactome: R-HSA-1362409 AM393_RS25530 a4a0762e5ec474b3c9a5838a8b866b4a 115 Gene3D G3DSA:3.40.30.10 3 115 3.0E-30 T 28-03-2018 AM393_RS11470 1ceeffe00f017fb8de75a97f4e5855c7 302 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 7 299 1.0E-59 T 28-03-2018 IPR010106 Recombination-promoting nuclease RpnA AM393_RS11470 1ceeffe00f017fb8de75a97f4e5855c7 302 Pfam PF04754 Putative transposase, YhgA-like 6 207 5.3E-86 T 28-03-2018 IPR006842 Transposase (putative), YhgA-like AM393_RS11470 1ceeffe00f017fb8de75a97f4e5855c7 302 Gene3D G3DSA:1.10.10.60 249 300 5.3E-9 T 28-03-2018 AM393_RS27925 a2cea4bccd65f06637b67395115ec1a6 412 SUPERFAMILY SSF116734 210 405 2.94E-52 T 28-03-2018 AM393_RS27925 a2cea4bccd65f06637b67395115ec1a6 412 Pfam PF01420 Type I restriction modification DNA specificity domain 3 181 5.4E-10 T 28-03-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 AM393_RS27925 a2cea4bccd65f06637b67395115ec1a6 412 Pfam PF01420 Type I restriction modification DNA specificity domain 213 382 5.0E-29 T 28-03-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 AM393_RS27925 a2cea4bccd65f06637b67395115ec1a6 412 Gene3D G3DSA:3.90.220.20 1 178 3.9E-28 T 28-03-2018 AM393_RS27925 a2cea4bccd65f06637b67395115ec1a6 412 Gene3D G3DSA:3.90.220.20 179 384 2.8E-44 T 28-03-2018 AM393_RS27925 a2cea4bccd65f06637b67395115ec1a6 412 SUPERFAMILY SSF116734 2 203 2.94E-42 T 28-03-2018 AM393_RS03415 8d3ca851e8f9989aedf431191c4b2cc5 307 Gene3D G3DSA:1.10.10.60 249 303 7.0E-7 T 28-03-2018 AM393_RS03415 8d3ca851e8f9989aedf431191c4b2cc5 307 Pfam PF04754 Putative transposase, YhgA-like 7 208 5.5E-86 T 28-03-2018 IPR006842 Transposase (putative), YhgA-like AM393_RS03415 8d3ca851e8f9989aedf431191c4b2cc5 307 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 8 302 2.6E-59 T 28-03-2018 IPR010106 Recombination-promoting nuclease RpnA AM393_RS22855 91d57fb62f88249284fc7b8633ec9bb2 67 TIGRFAM TIGR03318 YdfZ_fam: putative selenium-binding protein YdfZ 1 65 4.6E-39 T 28-03-2018 IPR017704 Putative selenium-binding protein YdfZ AM393_RS22855 91d57fb62f88249284fc7b8633ec9bb2 67 Pfam PF14001 YdfZ protein 2 65 1.9E-35 T 28-03-2018 IPR017704 Putative selenium-binding protein YdfZ AM393_RS17860 0437e8ad3ebd91c28f0353c86a386227 522 Gene3D G3DSA:3.10.105.10 293 493 1.1E-36 T 28-03-2018 AM393_RS17860 0437e8ad3ebd91c28f0353c86a386227 522 Gene3D G3DSA:3.90.76.10 36 191 2.4E-24 T 28-03-2018 AM393_RS17860 0437e8ad3ebd91c28f0353c86a386227 522 Gene3D G3DSA:3.40.190.10 194 292 2.7E-17 T 28-03-2018 AM393_RS17860 0437e8ad3ebd91c28f0353c86a386227 522 PIRSF PIRSF002741 4 520 5.6E-64 T 28-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AM393_RS17860 0437e8ad3ebd91c28f0353c86a386227 522 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 70 437 7.5E-68 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain AM393_RS17860 0437e8ad3ebd91c28f0353c86a386227 522 SUPERFAMILY SSF53850 21 517 2.31E-100 T 28-03-2018 AM393_RS06860 ca5f9b4403655192df96a7fd39ef066f 413 Hamap MF_01262 CCA-adding enzyme [cca]. 1 401 45.515 T 28-03-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 AM393_RS06860 ca5f9b4403655192df96a7fd39ef066f 413 PIRSF PIRSF000813 1 408 6.1E-203 T 28-03-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 AM393_RS06860 ca5f9b4403655192df96a7fd39ef066f 413 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 149 212 8.1E-15 T 28-03-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 AM393_RS06860 ca5f9b4403655192df96a7fd39ef066f 413 Hamap MF_01261 Multifunctional CCA protein [cca]. 1 407 53.394 T 28-03-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 AM393_RS06860 ca5f9b4403655192df96a7fd39ef066f 413 Pfam PF01743 Poly A polymerase head domain 4 122 2.7E-18 T 28-03-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 AM393_RS06860 ca5f9b4403655192df96a7fd39ef066f 413 SUPERFAMILY SSF81891 120 402 3.14E-56 T 28-03-2018 AM393_RS06860 ca5f9b4403655192df96a7fd39ef066f 413 SUPERFAMILY SSF81301 2 119 5.23E-31 T 28-03-2018 AM393_RS06860 ca5f9b4403655192df96a7fd39ef066f 413 Gene3D G3DSA:3.30.460.10 1 118 1.2E-29 T 28-03-2018 AM393_RS06860 ca5f9b4403655192df96a7fd39ef066f 413 Pfam PF01966 HD domain 231 328 1.2E-11 T 28-03-2018 IPR006674 HD domain AM393_RS06860 ca5f9b4403655192df96a7fd39ef066f 413 Gene3D G3DSA:1.10.3090.10 119 408 1.8E-59 T 28-03-2018 AM393_RS19785 83e1f4c4adc5389b575c0807c1c6832a 480 Gene3D G3DSA:3.40.50.720 2 302 8.7E-28 T 28-03-2018 AM393_RS19785 83e1f4c4adc5389b575c0807c1c6832a 480 Gene3D G3DSA:3.30.530.20 325 479 3.4E-6 T 28-03-2018 IPR023393 START-like domain AM393_RS19785 83e1f4c4adc5389b575c0807c1c6832a 480 Pfam PF11066 Protein of unknown function (DUF2867) 332 463 2.6E-14 T 28-03-2018 IPR021295 Protein of unknown function DUF2867 AM393_RS19785 83e1f4c4adc5389b575c0807c1c6832a 480 Pfam PF13460 NAD(P)H-binding 9 149 1.9E-15 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS19785 83e1f4c4adc5389b575c0807c1c6832a 480 SUPERFAMILY SSF51735 4 294 1.83E-44 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS20915 066d28d1caffbc5cabf101411bc80f08 261 Gene3D G3DSA:1.10.3720.10 5 258 5.1E-39 T 28-03-2018 AM393_RS20915 066d28d1caffbc5cabf101411bc80f08 261 SUPERFAMILY SSF161098 3 254 2.88E-55 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS20915 066d28d1caffbc5cabf101411bc80f08 261 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 75 253 1.6E-19 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS26900 d0cf22e86814a127d317fcc47eb41ff9 147 Pfam PF04965 Gene 25-like lysozyme 32 113 6.9E-12 T 28-03-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD AM393_RS26900 d0cf22e86814a127d317fcc47eb41ff9 147 SUPERFAMILY SSF160719 29 119 1.7E-17 T 28-03-2018 AM393_RS26900 d0cf22e86814a127d317fcc47eb41ff9 147 TIGRFAM TIGR03357 VI_zyme: type VI secretion system lysozyme-like protein 4 113 1.2E-24 T 28-03-2018 IPR017737 Type VI secretion system, lysozyme-related protein AM393_RS26900 d0cf22e86814a127d317fcc47eb41ff9 147 Gene3D G3DSA:3.10.450.40 5 130 1.2E-16 T 28-03-2018 AM393_RS28005 6e2be12953ae7574dcc89e8fc0b8aab8 79 Pfam PF09679 Type-F conjugative transfer system pilin chaperone (TraQ) 5 71 2.0E-15 T 28-03-2018 IPR014112 Type-F conjugative transfer system pilin chaperone TraQ AM393_RS19090 b2eaec1e5f21d18d9e77ad4c0c678e8c 321 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 21 295 2.1E-17 T 28-03-2018 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD AM393_RS06865 32732b097680630c5145413d25902fe8 273 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 10 265 1.7E-103 T 28-03-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 AM393_RS06865 32732b097680630c5145413d25902fe8 273 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 5 272 18.751 T 28-03-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 AM393_RS06865 32732b097680630c5145413d25902fe8 273 Pfam PF02673 Bacitracin resistance protein BacA 10 266 2.8E-87 T 28-03-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 AM393_RS18020 834d26a1d88983661e20238d7e7be407 319 SUPERFAMILY SSF53807 31 315 3.1E-46 T 28-03-2018 AM393_RS18020 834d26a1d88983661e20238d7e7be407 319 Gene3D G3DSA:3.40.50.1980 22 155 4.8E-23 T 28-03-2018 AM393_RS18020 834d26a1d88983661e20238d7e7be407 319 Pfam PF01497 Periplasmic binding protein 49 296 2.0E-26 T 28-03-2018 IPR002491 ABC transporter periplasmic binding domain GO:0005488 AM393_RS18020 834d26a1d88983661e20238d7e7be407 319 Gene3D G3DSA:3.40.50.1980 156 319 7.6E-31 T 28-03-2018 AM393_RS20800 c36ff36a6273ac51ec470d2e82883567 118 SUPERFAMILY SSF54197 2 113 2.84E-36 T 28-03-2018 IPR011146 HIT-like domain GO:0003824 AM393_RS20800 c36ff36a6273ac51ec470d2e82883567 118 PRINTS PR00332 Histidine triad family signature 27 45 8.1E-20 T 28-03-2018 IPR001310 Histidine triad (HIT) protein AM393_RS20800 c36ff36a6273ac51ec470d2e82883567 118 PRINTS PR00332 Histidine triad family signature 6 22 8.1E-20 T 28-03-2018 IPR001310 Histidine triad (HIT) protein AM393_RS20800 c36ff36a6273ac51ec470d2e82883567 118 PRINTS PR00332 Histidine triad family signature 95 105 8.1E-20 T 28-03-2018 IPR001310 Histidine triad (HIT) protein AM393_RS20800 c36ff36a6273ac51ec470d2e82883567 118 ProSitePatterns PS00892 HIT domain signature. 88 106 - T 28-03-2018 IPR019808 Histidine triad, conserved site AM393_RS20800 c36ff36a6273ac51ec470d2e82883567 118 Pfam PF01230 HIT domain 12 109 3.0E-29 T 28-03-2018 IPR001310 Histidine triad (HIT) protein AM393_RS20800 c36ff36a6273ac51ec470d2e82883567 118 Gene3D G3DSA:3.30.428.10 1 113 4.5E-29 T 28-03-2018 IPR011146 HIT-like domain GO:0003824 AM393_RS07155 d6e9dcbe549f9ff0f5d6612ff8276647 235 SUPERFAMILY SSF56037 50 225 2.88E-25 T 28-03-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 AM393_RS07155 d6e9dcbe549f9ff0f5d6612ff8276647 235 Gene3D G3DSA:3.50.40.10 54 197 9.6E-22 T 28-03-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 AM393_RS07155 d6e9dcbe549f9ff0f5d6612ff8276647 235 SMART SM00873 61 217 1.8E-16 T 28-03-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 AM393_RS07155 d6e9dcbe549f9ff0f5d6612ff8276647 235 Pfam PF03483 B3/4 domain 63 191 4.0E-17 T 28-03-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 AM393_RS11735 9a43698a737bbec2d1fd221de54450fd 101 SUPERFAMILY SSF52794 1 100 3.66E-35 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AM393_RS11735 9a43698a737bbec2d1fd221de54450fd 101 Gene3D G3DSA:3.40.50.2300 2 101 8.2E-38 T 28-03-2018 AM393_RS11735 9a43698a737bbec2d1fd221de54450fd 101 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 3 95 2.1E-25 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AM393_RS00685 2708dc41fae1685b6ba75b770c27de4c 336 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 27 329 4.2E-147 T 28-03-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 AM393_RS00685 2708dc41fae1685b6ba75b770c27de4c 336 SMART SM00382 54 181 1.3E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS00685 2708dc41fae1685b6ba75b770c27de4c 336 Gene3D G3DSA:1.10.8.60 187 257 1.5E-32 T 28-03-2018 AM393_RS00685 2708dc41fae1685b6ba75b770c27de4c 336 SUPERFAMILY SSF52540 23 255 6.05E-54 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS00685 2708dc41fae1685b6ba75b770c27de4c 336 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 7 238 4.0E-116 T 28-03-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 AM393_RS00685 2708dc41fae1685b6ba75b770c27de4c 336 Gene3D G3DSA:3.40.50.300 21 184 2.8E-27 T 28-03-2018 AM393_RS00685 2708dc41fae1685b6ba75b770c27de4c 336 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 336 185.546 T 28-03-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 AM393_RS00685 2708dc41fae1685b6ba75b770c27de4c 336 Gene3D G3DSA:1.10.10.10 260 330 1.8E-33 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS00685 2708dc41fae1685b6ba75b770c27de4c 336 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 256 329 1.1E-32 T 28-03-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 AM393_RS00685 2708dc41fae1685b6ba75b770c27de4c 336 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 253 331 1.0E-40 T 28-03-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 AM393_RS00685 2708dc41fae1685b6ba75b770c27de4c 336 SUPERFAMILY SSF46785 260 333 6.46E-25 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS07070 2e762170cec541f773444fd009588e2e 210 TIGRFAM TIGR02365 dha_L_ycgS: dihydroxyacetone kinase, L subunit 9 205 1.8E-78 T 28-03-2018 IPR012737 Dihydroxyacetone kinase, subunit L GO:0016772 AM393_RS07070 2e762170cec541f773444fd009588e2e 210 Pfam PF02734 DAK2 domain 32 205 2.1E-54 T 28-03-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 AM393_RS07070 2e762170cec541f773444fd009588e2e 210 SUPERFAMILY SSF101473 2 205 1.11E-56 T 28-03-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 AM393_RS07070 2e762170cec541f773444fd009588e2e 210 SMART SM01120 32 206 1.7E-79 T 28-03-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 AM393_RS27515 a17d6849f55b414f3ff8712acfc5a6d8 181 Pfam PF08281 Sigma-70, region 4 105 156 1.7E-8 T 28-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM393_RS27515 a17d6849f55b414f3ff8712acfc5a6d8 181 Gene3D G3DSA:1.10.1740.10 5 64 2.4E-16 T 28-03-2018 AM393_RS27515 a17d6849f55b414f3ff8712acfc5a6d8 181 Pfam PF04542 Sigma-70 region 2 15 80 3.8E-13 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM393_RS27515 a17d6849f55b414f3ff8712acfc5a6d8 181 Gene3D G3DSA:1.10.10.10 65 173 1.2E-6 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS27515 a17d6849f55b414f3ff8712acfc5a6d8 181 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 14 159 3.5E-20 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM393_RS27515 a17d6849f55b414f3ff8712acfc5a6d8 181 SUPERFAMILY SSF88659 102 160 7.85E-9 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM393_RS27515 a17d6849f55b414f3ff8712acfc5a6d8 181 SUPERFAMILY SSF88946 12 93 3.92E-17 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM393_RS19180 3624ead68c3349cbc557984cd839ace5 88 PRINTS PR00618 DksA/TraR zinc finger signature 51 63 4.2E-6 T 28-03-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria AM393_RS19180 3624ead68c3349cbc557984cd839ace5 88 PRINTS PR00618 DksA/TraR zinc finger signature 39 50 4.2E-6 T 28-03-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria AM393_RS19180 3624ead68c3349cbc557984cd839ace5 88 TIGRFAM TIGR02419 C4_traR_proteo: phage/conjugal plasmid C-4 type zinc finger protein, TraR family 14 67 3.9E-17 T 28-03-2018 IPR012783 Zinc finger, C4 DksA/TraR-type AM393_RS19180 3624ead68c3349cbc557984cd839ace5 88 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 39 63 - T 28-03-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site AM393_RS19180 3624ead68c3349cbc557984cd839ace5 88 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 37 67 3.0E-15 T 28-03-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 AM393_RS19180 3624ead68c3349cbc557984cd839ace5 88 SUPERFAMILY SSF57716 38 73 1.95E-9 T 28-03-2018 AM393_RS12195 ae862218bb826db0322b5578ce9a233b 256 SUPERFAMILY SSF56281 1 245 1.97E-38 T 28-03-2018 IPR001279 Metallo-beta-lactamase AM393_RS12195 ae862218bb826db0322b5578ce9a233b 256 Pfam PF12706 Beta-lactamase superfamily domain 32 206 2.2E-14 T 28-03-2018 IPR001279 Metallo-beta-lactamase AM393_RS12195 ae862218bb826db0322b5578ce9a233b 256 Gene3D G3DSA:3.60.15.10 1 254 1.7E-31 T 28-03-2018 IPR001279 Metallo-beta-lactamase AM393_RS19590 15c02fbb203c3228d7ba279e9c93b0f3 302 PIRSF PIRSF020481 1 302 5.8E-121 T 28-03-2018 IPR014507 Baseplate assembly protein J, predicted AM393_RS19590 15c02fbb203c3228d7ba279e9c93b0f3 302 Pfam PF04865 Baseplate J-like protein 118 261 6.4E-24 T 28-03-2018 IPR006949 Baseplate protein J-like AM393_RS08340 398930ab9f59a824b9bd5f5369c027e9 158 TIGRFAM TIGR00754 bfr: bacterioferritin 1 155 3.1E-80 T 28-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AM393_RS08340 398930ab9f59a824b9bd5f5369c027e9 158 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 28-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AM393_RS08340 398930ab9f59a824b9bd5f5369c027e9 158 PRINTS PR00601 Bacterioferritin signature 86 106 1.1E-76 T 28-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AM393_RS08340 398930ab9f59a824b9bd5f5369c027e9 158 PRINTS PR00601 Bacterioferritin signature 65 85 1.1E-76 T 28-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AM393_RS08340 398930ab9f59a824b9bd5f5369c027e9 158 PRINTS PR00601 Bacterioferritin signature 128 149 1.1E-76 T 28-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AM393_RS08340 398930ab9f59a824b9bd5f5369c027e9 158 PRINTS PR00601 Bacterioferritin signature 3 22 1.1E-76 T 28-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AM393_RS08340 398930ab9f59a824b9bd5f5369c027e9 158 PRINTS PR00601 Bacterioferritin signature 23 43 1.1E-76 T 28-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AM393_RS08340 398930ab9f59a824b9bd5f5369c027e9 158 PRINTS PR00601 Bacterioferritin signature 44 64 1.1E-76 T 28-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AM393_RS08340 398930ab9f59a824b9bd5f5369c027e9 158 PRINTS PR00601 Bacterioferritin signature 107 127 1.1E-76 T 28-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AM393_RS08340 398930ab9f59a824b9bd5f5369c027e9 158 SUPERFAMILY SSF47240 1 154 7.93E-54 T 28-03-2018 IPR009078 Ferritin-like superfamily AM393_RS08340 398930ab9f59a824b9bd5f5369c027e9 158 Pfam PF00210 Ferritin-like domain 9 143 3.7E-38 T 28-03-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 AM393_RS08340 398930ab9f59a824b9bd5f5369c027e9 158 Gene3D G3DSA:1.20.1260.10 2 149 9.3E-40 T 28-03-2018 IPR012347 Ferritin-related AM393_RS08340 398930ab9f59a824b9bd5f5369c027e9 158 PIRSF PIRSF002560 1 157 6.0E-71 T 28-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AM393_RS19370 6e8bb168f81cf14f7d21efb688e5be2a 127 Pfam PF10799 Biofilm formation protein (YliH/bssR) 1 126 4.6E-73 T 28-03-2018 IPR020359 Biofilm regulator BssR AM393_RS19370 6e8bb168f81cf14f7d21efb688e5be2a 127 ProDom PD079626 YLIH RECEPTOR STY0893 CYTOPLASMIC 1 124 5.0E-32 T 28-03-2018 IPR020359 Biofilm regulator BssR AM393_RS14030 c031c2827dd5527ff734fb29dfaec383 921 Gene3D G3DSA:1.10.8.60 288 368 1.1E-7 T 28-03-2018 AM393_RS14030 c031c2827dd5527ff734fb29dfaec383 921 Pfam PF03610 PTS system fructose IIA component 564 649 5.2E-6 T 28-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 AM393_RS14030 c031c2827dd5527ff734fb29dfaec383 921 Gene3D G3DSA:3.40.50.300 114 287 5.2E-18 T 28-03-2018 AM393_RS14030 c031c2827dd5527ff734fb29dfaec383 921 Gene3D G3DSA:3.40.50.2300 693 804 0.0039 T 28-03-2018 AM393_RS14030 c031c2827dd5527ff734fb29dfaec383 921 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 202 217 - T 28-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AM393_RS14030 c031c2827dd5527ff734fb29dfaec383 921 SMART SM00382 129 279 1.5E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS14030 c031c2827dd5527ff734fb29dfaec383 921 Gene3D G3DSA:1.10.1790.10 814 913 3.7E-5 T 28-03-2018 IPR011608 PRD domain GO:0006355 AM393_RS14030 c031c2827dd5527ff734fb29dfaec383 921 Pfam PF00158 Sigma-54 interaction domain 107 272 2.5E-48 T 28-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AM393_RS14030 c031c2827dd5527ff734fb29dfaec383 921 SUPERFAMILY SSF63520 818 908 5.23E-8 T 28-03-2018 IPR011608 PRD domain GO:0006355 AM393_RS14030 c031c2827dd5527ff734fb29dfaec383 921 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 133 146 - T 28-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AM393_RS14030 c031c2827dd5527ff734fb29dfaec383 921 Gene3D G3DSA:1.10.1790.10 450 548 0.035 T 28-03-2018 IPR011608 PRD domain GO:0006355 AM393_RS14030 c031c2827dd5527ff734fb29dfaec383 921 SUPERFAMILY SSF53062 563 674 2.09E-11 T 28-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 AM393_RS14030 c031c2827dd5527ff734fb29dfaec383 921 Gene3D G3DSA:1.10.10.10 1 71 3.1E-7 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS14030 c031c2827dd5527ff734fb29dfaec383 921 Pfam PF00874 PRD domain 827 908 5.3E-5 T 28-03-2018 IPR011608 PRD domain GO:0006355 AM393_RS14030 c031c2827dd5527ff734fb29dfaec383 921 SUPERFAMILY SSF52540 108 348 1.63E-39 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS14030 c031c2827dd5527ff734fb29dfaec383 921 Gene3D G3DSA:3.40.50.510 549 692 1.3E-17 T 28-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 AM393_RS09895 d2e06bffcc794688eddd72c9327946f4 240 SUPERFAMILY SSF46689 11 71 2.33E-11 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS09895 d2e06bffcc794688eddd72c9327946f4 240 Pfam PF01418 Helix-turn-helix domain, rpiR family 11 65 1.6E-10 T 28-03-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 AM393_RS09895 d2e06bffcc794688eddd72c9327946f4 240 Pfam PF01380 SIS domain 102 205 6.1E-8 T 28-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AM393_RS09895 d2e06bffcc794688eddd72c9327946f4 240 SUPERFAMILY SSF53697 101 206 5.56E-15 T 28-03-2018 AM393_RS09895 d2e06bffcc794688eddd72c9327946f4 240 Gene3D G3DSA:1.10.10.10 5 97 2.0E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS09895 d2e06bffcc794688eddd72c9327946f4 240 Gene3D G3DSA:3.40.50.10490 98 209 3.9E-11 T 28-03-2018 AM393_RS20565 f719e709ddb76398cb2866ce773bef95 312 SUPERFAMILY SSF51735 98 278 3.85E-42 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS20565 f719e709ddb76398cb2866ce773bef95 312 Hamap MF_01666 Glyoxylate/hydroxypyruvate reductase A [ghrA]. 1 312 63.467 T 28-03-2018 IPR023514 Glyoxylate/hydroxypyruvate reductase A GO:0016618|GO:0030267|GO:0055114 KEGG: 00260+1.1.1.81|KEGG: 00620+1.1.1.79|KEGG: 00630+1.1.1.79+1.1.1.81|MetaCyc: PWY-1622 AM393_RS20565 f719e709ddb76398cb2866ce773bef95 312 Gene3D G3DSA:3.40.50.720 125 278 1.5E-32 T 28-03-2018 AM393_RS20565 f719e709ddb76398cb2866ce773bef95 312 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 105 277 8.8E-43 T 28-03-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AM393_RS20565 f719e709ddb76398cb2866ce773bef95 312 Gene3D G3DSA:3.40.50.720 1 124 1.0E-10 T 28-03-2018 AM393_RS07110 f7aa59d64f381c00e83c8b9abfaf2cd1 295 SMART SM01133 51 259 1.8E-27 T 28-03-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 AM393_RS07110 f7aa59d64f381c00e83c8b9abfaf2cd1 295 Pfam PF01791 DeoC/LacD family aldolase 52 258 2.9E-17 T 28-03-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 AM393_RS07110 f7aa59d64f381c00e83c8b9abfaf2cd1 295 Gene3D G3DSA:3.20.20.70 1 291 7.1E-64 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM393_RS07110 f7aa59d64f381c00e83c8b9abfaf2cd1 295 Hamap MF_02052 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase [lsrF]. 1 291 72.91 T 28-03-2018 IPR033673 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase GO:0016747 KEGG: 00600+2.3.1.24 AM393_RS07110 f7aa59d64f381c00e83c8b9abfaf2cd1 295 SUPERFAMILY SSF51569 35 275 2.64E-61 T 28-03-2018 AM393_RS07110 f7aa59d64f381c00e83c8b9abfaf2cd1 295 PIRSF PIRSF038992 31 289 7.2E-78 T 28-03-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 AM393_RS24345 8cda07d71d5b9cf6c3abb0d78acdb683 185 Pfam PF01638 HxlR-like helix-turn-helix 20 105 1.9E-21 T 28-03-2018 IPR002577 Helix-turn-helix, HxlR type AM393_RS24345 8cda07d71d5b9cf6c3abb0d78acdb683 185 Gene3D G3DSA:1.10.10.10 1 168 1.4E-25 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS24345 8cda07d71d5b9cf6c3abb0d78acdb683 185 SUPERFAMILY SSF46785 7 143 6.57E-35 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS10510 4f8bc948c1dde7e3e0fe0d29b099ba2a 513 SUPERFAMILY SSF50615 10 94 4.51E-25 T 28-03-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AM393_RS10510 4f8bc948c1dde7e3e0fe0d29b099ba2a 513 SUPERFAMILY SSF52540 96 381 4.59E-94 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS10510 4f8bc948c1dde7e3e0fe0d29b099ba2a 513 Gene3D G3DSA:3.40.50.300 83 375 2.8E-112 T 28-03-2018 AM393_RS10510 4f8bc948c1dde7e3e0fe0d29b099ba2a 513 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 375 3.7E-73 T 28-03-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AM393_RS10510 4f8bc948c1dde7e3e0fe0d29b099ba2a 513 Gene3D G3DSA:1.20.150.20 384 510 5.9E-46 T 28-03-2018 AM393_RS10510 4f8bc948c1dde7e3e0fe0d29b099ba2a 513 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 29 92 1.0E-12 T 28-03-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AM393_RS10510 4f8bc948c1dde7e3e0fe0d29b099ba2a 513 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 382 507 3.5E-45 T 28-03-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM393_RS10510 4f8bc948c1dde7e3e0fe0d29b099ba2a 513 SUPERFAMILY SSF47917 383 511 2.01E-45 T 28-03-2018 AM393_RS10510 4f8bc948c1dde7e3e0fe0d29b099ba2a 513 Gene3D G3DSA:2.40.30.20 3 82 2.9E-27 T 28-03-2018 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM393_RS10510 4f8bc948c1dde7e3e0fe0d29b099ba2a 513 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 512 49.823 T 28-03-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM393_RS10510 4f8bc948c1dde7e3e0fe0d29b099ba2a 513 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 2 512 7.1E-261 T 28-03-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM393_RS10510 4f8bc948c1dde7e3e0fe0d29b099ba2a 513 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 366 375 - T 28-03-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AM393_RS15640 dcf7e3434e37902ebbaa7e4ccd84578e 71 Pfam PF04400 (Na+)-NQR maturation NqrM 23 64 6.1E-22 T 28-03-2018 IPR007495 (Na+)-NQR maturation factor NqrM AM393_RS08595 ab204501b901eed77c83693deeb645c4 709 Pfam PF07095 Intracellular growth attenuator protein IgaA 1 703 0.0 T 28-03-2018 IPR010771 Intracellular growth attenuator IgaA GO:0009276|GO:0016021 AM393_RS08595 ab204501b901eed77c83693deeb645c4 709 ProDom PD147088 MEMBRANE INNER TRANSMEMBRANE IGAA HOMOLOG DEHYDROGENASE GROWTH ATTENUATOR INTRACELLULAR GENOME 3 696 0.0 T 28-03-2018 IPR010771 Intracellular growth attenuator IgaA GO:0009276|GO:0016021 AM393_RS13865 a08172dd78d9308c4e2dfaa4bfd2525b 716 Pfam PF02554 Carbon starvation protein CstA 34 403 3.2E-161 T 28-03-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 AM393_RS13865 a08172dd78d9308c4e2dfaa4bfd2525b 716 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 486 614 1.1E-33 T 28-03-2018 IPR025299 CstA, C-terminal domain AM393_RS20030 63f6c016d51bc2a5f5e0b8068cfc3c7a 259 Gene3D G3DSA:3.40.50.620 72 214 2.7E-28 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM393_RS20030 63f6c016d51bc2a5f5e0b8068cfc3c7a 259 Pfam PF02698 DUF218 domain 81 214 6.1E-27 T 28-03-2018 IPR003848 Domain of unknown function DUF218 AM393_RS06115 50a317ab916ce7df93bd912d02dc9a3a 406 Gene3D G3DSA:1.20.1250.20 2 201 3.0E-17 T 28-03-2018 AM393_RS06115 50a317ab916ce7df93bd912d02dc9a3a 406 Gene3D G3DSA:1.20.1250.20 202 399 2.6E-21 T 28-03-2018 AM393_RS06115 50a317ab916ce7df93bd912d02dc9a3a 406 Pfam PF07690 Major Facilitator Superfamily 11 357 3.4E-39 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS06115 50a317ab916ce7df93bd912d02dc9a3a 406 SUPERFAMILY SSF103473 4 397 2.49E-51 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS18200 5d9303ab556b66c67731a426323a7f23 386 SUPERFAMILY SSF53383 10 385 7.66E-99 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM393_RS18200 5d9303ab556b66c67731a426323a7f23 386 Pfam PF00155 Aminotransferase class I and II 32 382 6.4E-57 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AM393_RS18200 5d9303ab556b66c67731a426323a7f23 386 Gene3D G3DSA:3.90.1150.10 271 386 5.6E-26 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM393_RS18200 5d9303ab556b66c67731a426323a7f23 386 Gene3D G3DSA:3.40.640.10 70 270 2.0E-50 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM393_RS18200 5d9303ab556b66c67731a426323a7f23 386 Gene3D G3DSA:3.90.1150.10 4 69 0.067 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM393_RS15095 d010ed0b8e2ffc814b4ec28c44028e0c 284 Hamap MF_00158 Pantothenate synthetase [panC]. 2 280 39.604 T 28-03-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 AM393_RS15095 d010ed0b8e2ffc814b4ec28c44028e0c 284 SUPERFAMILY SSF52374 3 281 2.02E-104 T 28-03-2018 AM393_RS15095 d010ed0b8e2ffc814b4ec28c44028e0c 284 Gene3D G3DSA:3.30.1300.10 180 283 7.2E-31 T 28-03-2018 AM393_RS15095 d010ed0b8e2ffc814b4ec28c44028e0c 284 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 2 280 2.1E-122 T 28-03-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 AM393_RS15095 d010ed0b8e2ffc814b4ec28c44028e0c 284 Pfam PF02569 Pantoate-beta-alanine ligase 3 278 2.5E-102 T 28-03-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 AM393_RS15095 d010ed0b8e2ffc814b4ec28c44028e0c 284 Gene3D G3DSA:3.40.50.620 1 176 7.2E-76 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM393_RS03275 b279d1606a24454fb1b7109106244a2e 96 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 2 48 5.0E-18 T 28-03-2018 AM393_RS03275 b279d1606a24454fb1b7109106244a2e 96 SMART SM00877 2 78 2.2E-35 T 28-03-2018 IPR000249 Microcompartment protein, bacteria AM393_RS03275 b279d1606a24454fb1b7109106244a2e 96 ProSitePatterns PS01139 Bacterial microcompartiments proteins signature. 20 39 - T 28-03-2018 IPR020808 Bacterial microcompartments protein, conserved site AM393_RS03275 b279d1606a24454fb1b7109106244a2e 96 Pfam PF00936 BMC domain 3 78 1.6E-27 T 28-03-2018 IPR000249 Microcompartment protein, bacteria AM393_RS03275 b279d1606a24454fb1b7109106244a2e 96 SUPERFAMILY SSF143414 1 89 2.09E-31 T 28-03-2018 AM393_RS07115 820c375813382b1b05152436c954cfa9 333 SUPERFAMILY SSF53822 21 333 1.65E-84 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AM393_RS07115 820c375813382b1b05152436c954cfa9 333 Gene3D G3DSA:3.40.50.2300 133 333 9.0E-24 T 28-03-2018 AM393_RS07115 820c375813382b1b05152436c954cfa9 333 Gene3D G3DSA:3.40.50.2300 7 132 1.4E-14 T 28-03-2018 AM393_RS07115 820c375813382b1b05152436c954cfa9 333 Pfam PF13407 Periplasmic binding protein domain 23 278 3.2E-54 T 28-03-2018 IPR025997 Periplasmic binding protein AM393_RS03595 02bae307f8f8f6afb032b0ef09fbde3c 111 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 14 92 1.2E-15 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AM393_RS03595 02bae307f8f8f6afb032b0ef09fbde3c 111 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 42 52 - T 28-03-2018 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 AM393_RS03595 02bae307f8f8f6afb032b0ef09fbde3c 111 TIGRFAM TIGR02007 fdx_isc: ferredoxin, 2Fe-2S type, ISC system 2 111 5.0E-62 T 28-03-2018 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria GO:0009055|GO:0051537 AM393_RS03595 02bae307f8f8f6afb032b0ef09fbde3c 111 SUPERFAMILY SSF54292 4 109 2.22E-35 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AM393_RS03595 02bae307f8f8f6afb032b0ef09fbde3c 111 Gene3D G3DSA:3.10.20.30 4 111 1.5E-33 T 28-03-2018 IPR012675 Beta-grasp domain AM393_RS03595 02bae307f8f8f6afb032b0ef09fbde3c 111 PRINTS PR00355 Adrenodoxin signature 42 52 3.1E-10 T 28-03-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 AM393_RS03595 02bae307f8f8f6afb032b0ef09fbde3c 111 PRINTS PR00355 Adrenodoxin signature 60 74 3.1E-10 T 28-03-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 AM393_RS03595 02bae307f8f8f6afb032b0ef09fbde3c 111 PRINTS PR00355 Adrenodoxin signature 83 91 3.1E-10 T 28-03-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 AM393_RS08510 cc64ed0880c54bb8f204232f317682a4 108 Gene3D G3DSA:2.102.10.10 1 108 8.8E-18 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AM393_RS08510 cc64ed0880c54bb8f204232f317682a4 108 SUPERFAMILY SSF50022 1 107 2.07E-35 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AM393_RS08510 cc64ed0880c54bb8f204232f317682a4 108 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 3 107 4.3E-38 T 28-03-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 AM393_RS08510 cc64ed0880c54bb8f204232f317682a4 108 Pfam PF13806 Rieske-like [2Fe-2S] domain 3 106 1.1E-38 T 28-03-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 AM393_RS13910 3844fac1a888e50f41b656ae540b580a 126 Pfam PF02962 5-carboxymethyl-2-hydroxymuconate isomerase 2 124 1.6E-26 T 28-03-2018 IPR004220 5-carboxymethyl-2-hydroxymuconate isomerase GO:0008704|GO:0019439 KEGG: 00350+5.3.3.10 AM393_RS13910 3844fac1a888e50f41b656ae540b580a 126 Gene3D G3DSA:3.30.429.10 1 126 5.2E-47 T 28-03-2018 AM393_RS13910 3844fac1a888e50f41b656ae540b580a 126 SUPERFAMILY SSF55331 2 126 2.11E-45 T 28-03-2018 IPR014347 Tautomerase/MIF superfamily AM393_RS07175 901c7d87e0e16331f2c8df84c88f00b7 323 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 7 313 7.9E-121 T 28-03-2018 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 AM393_RS07175 901c7d87e0e16331f2c8df84c88f00b7 323 Pfam PF03741 Integral membrane protein TerC family 80 282 2.1E-56 T 28-03-2018 IPR005496 Integral membrane protein TerC GO:0016021 AM393_RS25035 38682ed18a11a3f013434d543178ec8b 169 Pfam PF00583 Acetyltransferase (GNAT) family 33 132 5.8E-12 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AM393_RS25035 38682ed18a11a3f013434d543178ec8b 169 Gene3D G3DSA:3.40.630.30 7 161 4.7E-21 T 28-03-2018 AM393_RS25035 38682ed18a11a3f013434d543178ec8b 169 SUPERFAMILY SSF55729 5 137 2.95E-21 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM393_RS21985 6167b0c9b64cdfe88915af5475aad2e6 393 Gene3D G3DSA:1.10.443.10 204 378 2.1E-25 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM393_RS21985 6167b0c9b64cdfe88915af5475aad2e6 393 Pfam PF00589 Phage integrase family 206 367 3.1E-19 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM393_RS21985 6167b0c9b64cdfe88915af5475aad2e6 393 Pfam PF13356 Arm DNA-binding domain 4 84 1.4E-14 T 28-03-2018 IPR025166 Integrase, DNA-binding domain AM393_RS21985 6167b0c9b64cdfe88915af5475aad2e6 393 Gene3D G3DSA:1.10.150.130 91 195 3.8E-8 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal AM393_RS21985 6167b0c9b64cdfe88915af5475aad2e6 393 SUPERFAMILY SSF56349 96 376 9.89E-44 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AM393_RS27185 01863be6c5cba763cf8f36ed0e44f32f 678 SUPERFAMILY SSF110849 37 134 1.92E-13 T 28-03-2018 IPR003115 ParB/Sulfiredoxin AM393_RS27185 01863be6c5cba763cf8f36ed0e44f32f 678 Gene3D G3DSA:3.90.1530.10 25 133 5.5E-18 T 28-03-2018 AM393_RS27185 01863be6c5cba763cf8f36ed0e44f32f 678 Pfam PF02195 ParB-like nuclease domain 38 132 9.0E-13 T 28-03-2018 IPR003115 ParB/Sulfiredoxin AM393_RS27185 01863be6c5cba763cf8f36ed0e44f32f 678 Gene3D G3DSA:1.10.10.730 134 180 7.2E-7 T 28-03-2018 AM393_RS27185 01863be6c5cba763cf8f36ed0e44f32f 678 SUPERFAMILY SSF109709 126 223 3.4E-18 T 28-03-2018 AM393_RS27185 01863be6c5cba763cf8f36ed0e44f32f 678 SMART SM00470 37 133 2.7E-17 T 28-03-2018 IPR003115 ParB/Sulfiredoxin AM393_RS10800 29885056ae3c1cceeb545d49f86beb19 326 SUPERFAMILY SSF53784 1 323 1.26E-72 T 28-03-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AM393_RS10800 29885056ae3c1cceeb545d49f86beb19 326 Gene3D G3DSA:3.40.50.450 1 211 2.5E-50 T 28-03-2018 AM393_RS10800 29885056ae3c1cceeb545d49f86beb19 326 PIRSF PIRSF000532 1 326 1.9E-65 T 28-03-2018 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 AM393_RS10800 29885056ae3c1cceeb545d49f86beb19 326 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 89 105 1.2E-35 T 28-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AM393_RS10800 29885056ae3c1cceeb545d49f86beb19 326 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 134 152 1.2E-35 T 28-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AM393_RS10800 29885056ae3c1cceeb545d49f86beb19 326 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 208 220 1.2E-35 T 28-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AM393_RS10800 29885056ae3c1cceeb545d49f86beb19 326 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 116 133 1.2E-35 T 28-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AM393_RS10800 29885056ae3c1cceeb545d49f86beb19 326 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 155 171 1.2E-35 T 28-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AM393_RS10800 29885056ae3c1cceeb545d49f86beb19 326 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 244 266 1.2E-35 T 28-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AM393_RS10800 29885056ae3c1cceeb545d49f86beb19 326 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 173 190 1.2E-35 T 28-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AM393_RS10800 29885056ae3c1cceeb545d49f86beb19 326 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 5 24 1.2E-35 T 28-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AM393_RS10800 29885056ae3c1cceeb545d49f86beb19 326 Pfam PF00365 Phosphofructokinase 2 280 2.5E-62 T 28-03-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AM393_RS07515 4600c0469c2fae1b66050fefccd222b6 209 Gene3D G3DSA:2.60.120.10 9 120 2.6E-6 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AM393_RS07515 4600c0469c2fae1b66050fefccd222b6 209 Pfam PF15977 Winged helix-turn-helix DNA binding 139 207 2.3E-27 T 28-03-2018 AM393_RS07515 4600c0469c2fae1b66050fefccd222b6 209 SUPERFAMILY SSF51206 17 114 4.98E-7 T 28-03-2018 IPR018490 Cyclic nucleotide-binding-like AM393_RS22600 66206ee980e036c9204e6362c55eff11 166 Pfam PF09335 SNARE associated Golgi protein 38 159 2.0E-11 T 28-03-2018 IPR032816 SNARE associated Golgi protein AM393_RS04245 79fcdcf0f6678b101b45d2b54f7bf06a 149 Hamap MF_00914 L-alanine exporter AlaE [alaE]. 1 144 33.695 T 28-03-2018 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 AM393_RS04245 79fcdcf0f6678b101b45d2b54f7bf06a 149 ProDom PD090021 MEMBRANE YGAW TRANSMEMBRANE INNER VV2263 Y3636 VC1828 VP1070 8 141 3.0E-54 T 28-03-2018 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 AM393_RS04245 79fcdcf0f6678b101b45d2b54f7bf06a 149 Pfam PF06610 L-alanine exporter 4 141 4.0E-67 T 28-03-2018 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 AM393_RS26880 aba115c1846cf7677fc3ef309ff24c65 363 Pfam PF06071 Protein of unknown function (DUF933) 279 362 9.2E-40 T 28-03-2018 IPR013029 Domain of unknown function DUF933 Reactome: R-HSA-114608 AM393_RS26880 aba115c1846cf7677fc3ef309ff24c65 363 Gene3D G3DSA:1.10.150.300 110 200 1.5E-27 T 28-03-2018 IPR023192 TGS-like domain Reactome: R-HSA-114608 AM393_RS26880 aba115c1846cf7677fc3ef309ff24c65 363 Gene3D G3DSA:3.10.20.30 263 362 6.5E-46 T 28-03-2018 IPR012675 Beta-grasp domain AM393_RS26880 aba115c1846cf7677fc3ef309ff24c65 363 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 363 2.6E-176 T 28-03-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 AM393_RS26880 aba115c1846cf7677fc3ef309ff24c65 363 SUPERFAMILY SSF52540 3 301 1.7E-84 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS26880 aba115c1846cf7677fc3ef309ff24c65 363 Pfam PF01926 50S ribosome-binding GTPase 5 115 2.0E-21 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 AM393_RS26880 aba115c1846cf7677fc3ef309ff24c65 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 2.3E-34 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 AM393_RS26880 aba115c1846cf7677fc3ef309ff24c65 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 2.3E-34 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 AM393_RS26880 aba115c1846cf7677fc3ef309ff24c65 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 2.3E-34 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 AM393_RS26880 aba115c1846cf7677fc3ef309ff24c65 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 2.3E-34 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 AM393_RS26880 aba115c1846cf7677fc3ef309ff24c65 363 Gene3D G3DSA:3.40.50.300 1 80 2.5E-8 T 28-03-2018 AM393_RS26880 aba115c1846cf7677fc3ef309ff24c65 363 SUPERFAMILY SSF81271 279 359 3.27E-36 T 28-03-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 AM393_RS26880 aba115c1846cf7677fc3ef309ff24c65 363 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 363 46.841 T 28-03-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 AM393_RS26880 aba115c1846cf7677fc3ef309ff24c65 363 PIRSF PIRSF006641 1 363 1.1E-157 T 28-03-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 AM393_RS05765 448a0c68984c0a2552b2f831fa472dd6 430 Pfam PF02040 Arsenical pump membrane protein 3 423 2.1E-151 T 28-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 AM393_RS05765 448a0c68984c0a2552b2f831fa472dd6 430 TIGRFAM TIGR00935 2a45: arsenite/antimonite efflux pump membrane protein 3 426 1.2E-208 T 28-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 AM393_RS05765 448a0c68984c0a2552b2f831fa472dd6 430 PRINTS PR00758 Arsenical pump membrane protein signature 101 125 1.6E-119 T 28-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 AM393_RS05765 448a0c68984c0a2552b2f831fa472dd6 430 PRINTS PR00758 Arsenical pump membrane protein signature 144 168 1.6E-119 T 28-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 AM393_RS05765 448a0c68984c0a2552b2f831fa472dd6 430 PRINTS PR00758 Arsenical pump membrane protein signature 177 200 1.6E-119 T 28-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 AM393_RS05765 448a0c68984c0a2552b2f831fa472dd6 430 PRINTS PR00758 Arsenical pump membrane protein signature 364 389 1.6E-119 T 28-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 AM393_RS05765 448a0c68984c0a2552b2f831fa472dd6 430 PRINTS PR00758 Arsenical pump membrane protein signature 323 345 1.6E-119 T 28-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 AM393_RS05765 448a0c68984c0a2552b2f831fa472dd6 430 PRINTS PR00758 Arsenical pump membrane protein signature 397 421 1.6E-119 T 28-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 AM393_RS05765 448a0c68984c0a2552b2f831fa472dd6 430 PRINTS PR00758 Arsenical pump membrane protein signature 217 242 1.6E-119 T 28-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 AM393_RS05765 448a0c68984c0a2552b2f831fa472dd6 430 PRINTS PR00758 Arsenical pump membrane protein signature 278 302 1.6E-119 T 28-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 AM393_RS20925 1cd51b17f973d6ffa3e38f8e5ed8eacd 378 Pfam PF08402 TOBE domain 292 372 3.4E-8 T 28-03-2018 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 AM393_RS20925 1cd51b17f973d6ffa3e38f8e5ed8eacd 378 Gene3D G3DSA:3.40.50.300 13 272 2.8E-75 T 28-03-2018 AM393_RS20925 1cd51b17f973d6ffa3e38f8e5ed8eacd 378 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 48 372 7.7E-165 T 28-03-2018 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 AM393_RS20925 1cd51b17f973d6ffa3e38f8e5ed8eacd 378 Pfam PF00005 ABC transporter 34 174 2.5E-36 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS20925 1cd51b17f973d6ffa3e38f8e5ed8eacd 378 SUPERFAMILY SSF52540 18 257 1.5E-88 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS20925 1cd51b17f973d6ffa3e38f8e5ed8eacd 378 SMART SM00382 42 225 9.3E-16 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS20925 1cd51b17f973d6ffa3e38f8e5ed8eacd 378 SUPERFAMILY SSF50331 250 364 1.25E-7 T 28-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal AM393_RS20925 1cd51b17f973d6ffa3e38f8e5ed8eacd 378 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS01425 45696b28405e5a6517e3286607261ad6 661 Gene3D G3DSA:3.40.50.300 4 579 5.6E-11 T 28-03-2018 AM393_RS01425 45696b28405e5a6517e3286607261ad6 661 Pfam PF12532 Protein of unknown function (DUF3732) 469 652 5.0E-49 T 28-03-2018 IPR022205 Protein of unknown function DUF3732 AM393_RS01425 45696b28405e5a6517e3286607261ad6 661 SUPERFAMILY SSF52540 455 572 8.32E-5 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS01425 45696b28405e5a6517e3286607261ad6 661 SUPERFAMILY SSF52540 17 93 8.32E-5 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS01425 45696b28405e5a6517e3286607261ad6 661 SUPERFAMILY SSF52540 299 314 8.32E-5 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS01425 45696b28405e5a6517e3286607261ad6 661 SUPERFAMILY SSF52540 124 134 8.32E-5 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS25390 a817946584986fa5a09e4eb48d6b6251 193 TIGRFAM TIGR01943 rnfA: electron transport complex, RnfABCDGE type, A subunit 3 191 4.8E-92 T 28-03-2018 IPR011293 Electron transport complex, subunit RnfA/RsxA GO:0022900 AM393_RS25390 a817946584986fa5a09e4eb48d6b6251 193 Hamap MF_00459 Electron transport complex subunit RsxA [rsxA]. 2 191 26.565 T 28-03-2018 IPR011293 Electron transport complex, subunit RnfA/RsxA GO:0022900 AM393_RS25390 a817946584986fa5a09e4eb48d6b6251 193 PIRSF PIRSF006102 1 193 2.1E-59 T 28-03-2018 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 AM393_RS25390 a817946584986fa5a09e4eb48d6b6251 193 Pfam PF02508 Rnf-Nqr subunit, membrane protein 5 190 1.9E-60 T 28-03-2018 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 AM393_RS22400 19af59f8f2d7fd5fdd03c2af7d3e07a6 361 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 21 320 3.6E-63 T 28-03-2018 IPR010732 Type VI secretion, TssG-like AM393_RS22400 19af59f8f2d7fd5fdd03c2af7d3e07a6 361 Pfam PF06996 Type VI secretion, TssG 21 320 6.4E-69 T 28-03-2018 IPR010732 Type VI secretion, TssG-like AM393_RS04180 5d1d97f4a307dfbaca6a810205ef5cf4 220 Gene3D G3DSA:2.60.40.10 22 137 7.1E-37 T 28-03-2018 IPR013783 Immunoglobulin-like fold AM393_RS04180 5d1d97f4a307dfbaca6a810205ef5cf4 220 SUPERFAMILY SSF49584 141 217 1.57E-23 T 28-03-2018 IPR016148 Pili assembly chaperone, C-terminal AM393_RS04180 5d1d97f4a307dfbaca6a810205ef5cf4 220 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 21 139 7.8E-42 T 28-03-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 AM393_RS04180 5d1d97f4a307dfbaca6a810205ef5cf4 220 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 161 215 1.3E-16 T 28-03-2018 IPR016148 Pili assembly chaperone, C-terminal AM393_RS04180 5d1d97f4a307dfbaca6a810205ef5cf4 220 SUPERFAMILY SSF49354 16 139 5.23E-41 T 28-03-2018 IPR008962 PapD-like AM393_RS04180 5d1d97f4a307dfbaca6a810205ef5cf4 220 Gene3D G3DSA:2.60.40.10 141 220 1.4E-26 T 28-03-2018 IPR013783 Immunoglobulin-like fold AM393_RS04180 5d1d97f4a307dfbaca6a810205ef5cf4 220 PRINTS PR00969 Pili chaperone signature 69 90 1.9E-35 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM393_RS04180 5d1d97f4a307dfbaca6a810205ef5cf4 220 PRINTS PR00969 Pili chaperone signature 97 114 1.9E-35 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM393_RS04180 5d1d97f4a307dfbaca6a810205ef5cf4 220 PRINTS PR00969 Pili chaperone signature 121 136 1.9E-35 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM393_RS04180 5d1d97f4a307dfbaca6a810205ef5cf4 220 PRINTS PR00969 Pili chaperone signature 156 171 1.9E-35 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM393_RS04180 5d1d97f4a307dfbaca6a810205ef5cf4 220 PRINTS PR00969 Pili chaperone signature 22 31 1.9E-35 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM393_RS18810 b1643deffe50f209dd817893156c75bc 121 ProDom PD079292 YBGS HOMEOBOX PRECURSOR SIGNAL PROBABLE SECRETED 30 121 6.0E-23 T 28-03-2018 IPR020363 Uncharacterised protein family YbgS AM393_RS18810 b1643deffe50f209dd817893156c75bc 121 Pfam PF13985 YbgS-like protein 3 121 9.5E-50 T 28-03-2018 IPR020363 Uncharacterised protein family YbgS AM393_RS18735 0eb787b5086431248f87ada011dae545 440 Gene3D G3DSA:3.30.1150.10 362 434 5.0E-21 T 28-03-2018 AM393_RS18735 0eb787b5086431248f87ada011dae545 440 SUPERFAMILY SSF74653 352 440 2.55E-23 T 28-03-2018 AM393_RS18735 0eb787b5086431248f87ada011dae545 440 Pfam PF06519 TolA C-terminal 345 437 3.2E-37 T 28-03-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 AM393_RS18735 0eb787b5086431248f87ada011dae545 440 TIGRFAM TIGR02794 tolA_full: protein TolA 228 439 5.4E-46 T 28-03-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 AM393_RS18735 0eb787b5086431248f87ada011dae545 440 TIGRFAM TIGR02794 tolA_full: protein TolA 12 255 2.3E-44 T 28-03-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 AM393_RS28125 a6a7c481086eb1b38b0bac1294f42a5f 177 Gene3D G3DSA:3.30.70.940 1 105 7.5E-15 T 28-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AM393_RS28125 a6a7c481086eb1b38b0bac1294f42a5f 177 SUPERFAMILY SSF82679 1 99 5.1E-21 T 28-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AM393_RS28125 a6a7c481086eb1b38b0bac1294f42a5f 177 Pfam PF02357 Transcription termination factor nusG 3 97 1.8E-15 T 28-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AM393_RS28125 a6a7c481086eb1b38b0bac1294f42a5f 177 SMART SM00738 1 102 1.7E-18 T 28-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AM393_RS15045 02c82cad8799e9af8e2e6de4f50e0c68 115 Pfam PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) 23 106 6.0E-10 T 28-03-2018 IPR019114 Chaperone lipoprotein, PulS/OutS-like AM393_RS15045 02c82cad8799e9af8e2e6de4f50e0c68 115 ProDom PD074041 YACC EXPORTED PRECURSOR SIGNAL PERIPLASMIC Y0776 SIMILAR ECS0126 STY0189 ESCHERICHIA 1 115 1.0E-44 T 28-03-2018 AM393_RS00815 4b49c318c0092f89748dc0d9f7963104 83 Pfam PF10964 Protein of unknown function (DUF2766) 1 78 1.7E-44 T 28-03-2018 IPR020262 Uncharacterised protein family YecJ AM393_RS00815 4b49c318c0092f89748dc0d9f7963104 83 ProDom PD060536 YECJ YPO1738 1 77 3.0E-30 T 28-03-2018 IPR020262 Uncharacterised protein family YecJ AM393_RS08710 6611acafda527839cd57d6b886061c46 109 Gene3D G3DSA:3.40.250.10 1 108 4.0E-27 T 28-03-2018 IPR001763 Rhodanese-like domain AM393_RS08710 6611acafda527839cd57d6b886061c46 109 Hamap MF_01009 Thiosulfate sulfurtransferase GlpE [glpE]. 2 105 31.69 T 28-03-2018 IPR023695 Thiosulfate sulfurtransferase, bacterial GO:0004792|GO:0005737 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 AM393_RS08710 6611acafda527839cd57d6b886061c46 109 SUPERFAMILY SSF52821 2 100 1.22E-28 T 28-03-2018 IPR001763 Rhodanese-like domain AM393_RS08710 6611acafda527839cd57d6b886061c46 109 Pfam PF00581 Rhodanese-like domain 9 98 1.4E-15 T 28-03-2018 IPR001763 Rhodanese-like domain AM393_RS08710 6611acafda527839cd57d6b886061c46 109 SMART SM00450 7 102 1.4E-21 T 28-03-2018 IPR001763 Rhodanese-like domain AM393_RS22790 b3bb8ac922bd7d8a098ebe40107f76f0 446 Hamap MF_01172 N-succinylarginine dihydrolase [astB]. 1 446 59.45 T 28-03-2018 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 AM393_RS22790 b3bb8ac922bd7d8a098ebe40107f76f0 446 Gene3D G3DSA:3.75.10.20 2 446 8.4E-218 T 28-03-2018 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 AM393_RS22790 b3bb8ac922bd7d8a098ebe40107f76f0 446 SUPERFAMILY SSF55909 4 446 8.5E-204 T 28-03-2018 AM393_RS22790 b3bb8ac922bd7d8a098ebe40107f76f0 446 Pfam PF04996 Succinylarginine dihydrolase 4 445 9.0E-219 T 28-03-2018 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 AM393_RS22790 b3bb8ac922bd7d8a098ebe40107f76f0 446 TIGRFAM TIGR03241 arg_catab_astB: succinylarginine dihydrolase 3 445 1.9E-230 T 28-03-2018 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 AM393_RS20795 f34ddfd3e935c65fb9ff74c3c295e844 477 TIGRFAM TIGR02002 PTS-II-BC-glcB: PTS system, glucose-specific IIBC component 2 475 4.1E-235 T 28-03-2018 IPR011299 PTS system glucose-specific IIBC component GO:0005355|GO:0015758|GO:0016021 AM393_RS20795 f34ddfd3e935c65fb9ff74c3c295e844 477 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 414 431 - T 28-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AM393_RS20795 f34ddfd3e935c65fb9ff74c3c295e844 477 SUPERFAMILY SSF55604 401 474 1.7E-20 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AM393_RS20795 f34ddfd3e935c65fb9ff74c3c295e844 477 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 378 460 2.0E-24 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AM393_RS20795 f34ddfd3e935c65fb9ff74c3c295e844 477 Pfam PF00367 phosphotransferase system, EIIB 405 436 2.6E-13 T 28-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AM393_RS20795 f34ddfd3e935c65fb9ff74c3c295e844 477 TIGRFAM TIGR00852 pts-Glc: PTS system, maltose and glucose-specific subfamily, IIC component 52 331 6.2E-91 T 28-03-2018 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component GO:0008982|GO:0009401|GO:0016021 AM393_RS20795 f34ddfd3e935c65fb9ff74c3c295e844 477 Pfam PF02378 Phosphotransferase system, EIIC 13 320 1.0E-84 T 28-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AM393_RS20795 f34ddfd3e935c65fb9ff74c3c295e844 477 Gene3D G3DSA:3.30.1360.60 399 474 1.9E-27 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AM393_RS10525 56b533cc370c1e28d908debdcf79489b 79 Pfam PF00137 ATP synthase subunit C 11 69 1.5E-9 T 28-03-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 AM393_RS10525 56b533cc370c1e28d908debdcf79489b 79 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 20 77 1.9E-31 T 28-03-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 AM393_RS10525 56b533cc370c1e28d908debdcf79489b 79 Gene3D G3DSA:1.20.20.10 1 79 9.1E-16 T 28-03-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 AM393_RS10525 56b533cc370c1e28d908debdcf79489b 79 SUPERFAMILY SSF81333 3 77 4.58E-18 T 28-03-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 AM393_RS10525 56b533cc370c1e28d908debdcf79489b 79 PRINTS PR00124 ATP synthase C subunit signature 12 31 1.6E-8 T 28-03-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM393_RS10525 56b533cc370c1e28d908debdcf79489b 79 PRINTS PR00124 ATP synthase C subunit signature 50 75 1.6E-8 T 28-03-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM393_RS10525 56b533cc370c1e28d908debdcf79489b 79 PRINTS PR00124 ATP synthase C subunit signature 33 48 1.6E-8 T 28-03-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM393_RS10525 56b533cc370c1e28d908debdcf79489b 79 Hamap MF_01396 ATP synthase subunit c [atpH]. 10 75 14.323 T 28-03-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM393_RS10525 56b533cc370c1e28d908debdcf79489b 79 ProSitePatterns PS00605 ATP synthase c subunit signature. 40 61 - T 28-03-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM393_RS21850 c67ebe3ef890145c3b5de20cc1295d24 222 Pfam PF04012 PspA/IM30 family 2 216 9.3E-49 T 28-03-2018 IPR007157 PspA/IM30 AM393_RS21850 c67ebe3ef890145c3b5de20cc1295d24 222 TIGRFAM TIGR02977 phageshock_pspA: phage shock protein A 1 219 4.6E-92 T 28-03-2018 IPR014319 Phage shock protein, PspA AM393_RS21850 c67ebe3ef890145c3b5de20cc1295d24 222 Gene3D G3DSA:1.20.1170.10 4 222 1.7E-4 T 28-03-2018 AM393_RS21485 5f4993dd70c40c23b43077ed5c3190fe 115 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 19 112 7.4E-33 T 28-03-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 AM393_RS21485 5f4993dd70c40c23b43077ed5c3190fe 115 SUPERFAMILY SSF46973 14 113 4.45E-35 T 28-03-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 AM393_RS21485 5f4993dd70c40c23b43077ed5c3190fe 115 Gene3D G3DSA:1.20.58.80 15 113 3.0E-35 T 28-03-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 AM393_RS21485 5f4993dd70c40c23b43077ed5c3190fe 115 PIRSF PIRSF000699 10 115 2.9E-40 T 28-03-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 AM393_RS17405 2d625c678b9979c09a81659cac09da4e 335 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 134 237 2.1E-7 T 28-03-2018 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 AM393_RS17405 2d625c678b9979c09a81659cac09da4e 335 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 5 121 1.2E-21 T 28-03-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 AM393_RS17405 2d625c678b9979c09a81659cac09da4e 335 Gene3D G3DSA:3.40.50.720 4 132 3.7E-34 T 28-03-2018 AM393_RS17405 2d625c678b9979c09a81659cac09da4e 335 SUPERFAMILY SSF55347 128 293 5.36E-27 T 28-03-2018 AM393_RS17405 2d625c678b9979c09a81659cac09da4e 335 Gene3D G3DSA:3.30.360.10 133 335 2.9E-37 T 28-03-2018 AM393_RS17405 2d625c678b9979c09a81659cac09da4e 335 SUPERFAMILY SSF51735 5 149 1.53E-40 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS24180 396d5067f0d4987038ad0bd0c75a5366 156 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 6 148 8.9E-34 T 28-03-2018 IPR002178 PTS EIIA type-2 domain AM393_RS24180 396d5067f0d4987038ad0bd0c75a5366 156 SUPERFAMILY SSF55804 1 149 1.15E-35 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 AM393_RS24180 396d5067f0d4987038ad0bd0c75a5366 156 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 7 134 2.2E-34 T 28-03-2018 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 AM393_RS24180 396d5067f0d4987038ad0bd0c75a5366 156 Gene3D G3DSA:3.40.930.10 1 151 1.0E-36 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 AM393_RS13830 444ca2166e9c3651890857386e5688e2 271 Gene3D G3DSA:2.60.120.10 1 95 1.7E-9 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AM393_RS13830 444ca2166e9c3651890857386e5688e2 271 Pfam PF02311 AraC-like ligand binding domain 29 147 1.1E-17 T 28-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AM393_RS13830 444ca2166e9c3651890857386e5688e2 271 Gene3D G3DSA:1.10.10.60 143 221 0.0018 T 28-03-2018 AM393_RS13830 444ca2166e9c3651890857386e5688e2 271 Pfam PF12833 Helix-turn-helix domain 187 263 1.3E-15 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM393_RS13830 444ca2166e9c3651890857386e5688e2 271 Gene3D G3DSA:1.10.10.60 222 270 6.7E-10 T 28-03-2018 AM393_RS13830 444ca2166e9c3651890857386e5688e2 271 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 217 258 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM393_RS13830 444ca2166e9c3651890857386e5688e2 271 SUPERFAMILY SSF46689 217 264 9.41E-9 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS13830 444ca2166e9c3651890857386e5688e2 271 SUPERFAMILY SSF51215 12 151 1.06E-21 T 28-03-2018 AM393_RS13830 444ca2166e9c3651890857386e5688e2 271 SMART SM00342 180 262 5.9E-18 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM393_RS29125 e66d472dc968d7eed0fabb11949f992b 200 Gene3D G3DSA:1.10.1220.10 18 127 6.4E-4 T 28-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 AM393_RS16900 bbe8079903dd044ee910fba276525820 164 SUPERFAMILY SSF50891 1 162 9.2E-60 T 28-03-2018 IPR029000 Cyclophilin-like domain AM393_RS16900 bbe8079903dd044ee910fba276525820 164 PIRSF PIRSF001467 1 164 3.2E-29 T 28-03-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 AM393_RS16900 bbe8079903dd044ee910fba276525820 164 Gene3D G3DSA:2.40.100.10 1 164 4.4E-53 T 28-03-2018 IPR029000 Cyclophilin-like domain AM393_RS16900 bbe8079903dd044ee910fba276525820 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 41 53 1.0E-11 T 28-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 AM393_RS16900 bbe8079903dd044ee910fba276525820 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 133 1.0E-11 T 28-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 AM393_RS16900 bbe8079903dd044ee910fba276525820 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 15 30 1.0E-11 T 28-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 AM393_RS16900 bbe8079903dd044ee910fba276525820 164 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 1 162 1.2E-48 T 28-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 AM393_RS16900 bbe8079903dd044ee910fba276525820 164 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 36 53 - T 28-03-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 AM393_RS28590 a77aa4fcb3c3d43ef51fe79788d06b7b 260 Gene3D G3DSA:3.40.50.300 49 239 1.4E-17 T 28-03-2018 AM393_RS28590 a77aa4fcb3c3d43ef51fe79788d06b7b 260 PIRSF PIRSF003073 2 258 2.6E-91 T 28-03-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein AM393_RS28590 a77aa4fcb3c3d43ef51fe79788d06b7b 260 SMART SM00382 102 236 1.9E-10 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS28590 a77aa4fcb3c3d43ef51fe79788d06b7b 260 SUPERFAMILY SSF52540 70 253 4.38E-26 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS28590 a77aa4fcb3c3d43ef51fe79788d06b7b 260 Pfam PF01695 IstB-like ATP binding protein 57 236 9.3E-72 T 28-03-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 AM393_RS28590 a77aa4fcb3c3d43ef51fe79788d06b7b 260 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 194 208 5.3E-5 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 AM393_RS28590 a77aa4fcb3c3d43ef51fe79788d06b7b 260 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 106 124 5.3E-5 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 AM393_RS19915 dc769a5f623ff628085bb9a2b76e8d64 430 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 428 42.136 T 28-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AM393_RS19915 dc769a5f623ff628085bb9a2b76e8d64 430 PIRSF PIRSF001529 1 430 5.4E-187 T 28-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AM393_RS19915 dc769a5f623ff628085bb9a2b76e8d64 430 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 423 4.9E-185 T 28-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AM393_RS19915 dc769a5f623ff628085bb9a2b76e8d64 430 PRINTS PR00981 Seryl-tRNA synthetase signature 282 295 6.5E-34 T 28-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AM393_RS19915 dc769a5f623ff628085bb9a2b76e8d64 430 PRINTS PR00981 Seryl-tRNA synthetase signature 322 335 6.5E-34 T 28-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AM393_RS19915 dc769a5f623ff628085bb9a2b76e8d64 430 PRINTS PR00981 Seryl-tRNA synthetase signature 270 282 6.5E-34 T 28-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AM393_RS19915 dc769a5f623ff628085bb9a2b76e8d64 430 PRINTS PR00981 Seryl-tRNA synthetase signature 339 355 6.5E-34 T 28-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AM393_RS19915 dc769a5f623ff628085bb9a2b76e8d64 430 PRINTS PR00981 Seryl-tRNA synthetase signature 357 373 6.5E-34 T 28-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AM393_RS19915 dc769a5f623ff628085bb9a2b76e8d64 430 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 107 5.4E-33 T 28-03-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 AM393_RS19915 dc769a5f623ff628085bb9a2b76e8d64 430 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 228 406 2.2E-36 T 28-03-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM393_RS19915 dc769a5f623ff628085bb9a2b76e8d64 430 Gene3D G3DSA:1.10.287.40 2 104 2.9E-26 T 28-03-2018 AM393_RS19915 dc769a5f623ff628085bb9a2b76e8d64 430 Gene3D G3DSA:3.30.930.10 105 430 1.7E-98 T 28-03-2018 AM393_RS19915 dc769a5f623ff628085bb9a2b76e8d64 430 SUPERFAMILY SSF46589 1 112 1.36E-32 T 28-03-2018 IPR010978 tRNA-binding arm GO:0000166 AM393_RS19915 dc769a5f623ff628085bb9a2b76e8d64 430 SUPERFAMILY SSF55681 116 424 4.42E-101 T 28-03-2018 AM393_RS22630 abd2c41b85708f6f106d1f246a6b9911 296 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 6 291 1.7E-44 T 28-03-2018 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0015940|GO:0016491|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|MetaCyc: PWY-7862 AM393_RS22630 abd2c41b85708f6f106d1f246a6b9911 296 SUPERFAMILY SSF48179 170 290 2.04E-24 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AM393_RS22630 abd2c41b85708f6f106d1f246a6b9911 296 Gene3D G3DSA:3.40.50.720 6 171 1.7E-22 T 28-03-2018 AM393_RS22630 abd2c41b85708f6f106d1f246a6b9911 296 SUPERFAMILY SSF51735 6 128 4.2E-10 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS22630 abd2c41b85708f6f106d1f246a6b9911 296 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 170 290 8.7E-23 T 28-03-2018 IPR013752 Ketopantoate reductase, C-terminal domain GO:0016491|GO:0050661|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|MetaCyc: PWY-7862 AM393_RS22630 abd2c41b85708f6f106d1f246a6b9911 296 Gene3D G3DSA:1.10.1040.10 172 294 7.9E-24 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AM393_RS22630 abd2c41b85708f6f106d1f246a6b9911 296 Pfam PF02558 Ketopantoate reductase PanE/ApbA 7 149 3.2E-24 T 28-03-2018 IPR013332 Ketopantoate reductase, N-terminal domain GO:0008677|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|MetaCyc: PWY-7862 AM393_RS16430 b4d20e611f7329b0bfa8d1b595fd21e0 203 Pfam PF00510 Cytochrome c oxidase subunit III 15 201 8.6E-17 T 28-03-2018 IPR000298 Cytochrome c oxidase-like subunit III GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM393_RS16430 b4d20e611f7329b0bfa8d1b595fd21e0 203 SUPERFAMILY SSF81452 10 201 8.89E-60 T 28-03-2018 IPR000298 Cytochrome c oxidase-like subunit III GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM393_RS16430 b4d20e611f7329b0bfa8d1b595fd21e0 203 TIGRFAM TIGR02842 CyoC: cytochrome o ubiquinol oxidase, subunit III 24 203 5.6E-88 T 28-03-2018 IPR014206 Cytochrome o ubiquinol oxidase, subunit III GO:0005886|GO:0008827|GO:0019646 AM393_RS16430 b4d20e611f7329b0bfa8d1b595fd21e0 203 Gene3D G3DSA:1.20.120.80 18 203 4.1E-52 T 28-03-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM393_RS09475 ca0041d65e05789537f216e810259f39 677 Gene3D G3DSA:3.20.20.80 327 655 3.7E-32 T 28-03-2018 AM393_RS09475 ca0041d65e05789537f216e810259f39 677 Gene3D G3DSA:3.20.20.80 133 326 1.5E-41 T 28-03-2018 AM393_RS09475 ca0041d65e05789537f216e810259f39 677 Pfam PF00128 Alpha amylase, catalytic domain 226 594 9.2E-38 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AM393_RS09475 ca0041d65e05789537f216e810259f39 677 SUPERFAMILY SSF51445 179 646 1.88E-74 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily AM393_RS09475 ca0041d65e05789537f216e810259f39 677 PIRSF PIRSF036917 1 676 0.0 T 28-03-2018 IPR014635 Alpha-amylase, MalS type GO:0004556|GO:0005509|GO:0030980|GO:0042597|GO:0051692 KEGG: 00500+3.2.1.1 AM393_RS09475 ca0041d65e05789537f216e810259f39 677 SMART SM00642 193 637 9.4E-78 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AM393_RS27465 59391f9939f9d2d2a1a61cdad87c7b8b 309 Pfam PF05425 Copper resistance protein D 196 300 1.8E-21 T 28-03-2018 IPR008457 Copper resistance protein D GO:0016021 AM393_RS15025 28fd837906cfe66705034562739137c4 405 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 312 396 4.9E-10 T 28-03-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AM393_RS15025 28fd837906cfe66705034562739137c4 405 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 188 294 1.3E-12 T 28-03-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 AM393_RS15025 28fd837906cfe66705034562739137c4 405 Gene3D G3DSA:3.10.50.40 292 405 1.7E-15 T 28-03-2018 AM393_RS15025 28fd837906cfe66705034562739137c4 405 SUPERFAMILY SSF54534 202 398 9.21E-21 T 28-03-2018 AM393_RS15025 28fd837906cfe66705034562739137c4 405 Gene3D G3DSA:1.20.5.50 2 140 6.1E-4 T 28-03-2018 AM393_RS15025 28fd837906cfe66705034562739137c4 405 Gene3D G3DSA:1.10.287.460 182 291 2.9E-14 T 28-03-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 AM393_RS21835 8faaa6ec9fa6dd1a2f2df124a31b397a 389 Pfam PF01546 Peptidase family M20/M25/M40 75 384 4.5E-32 T 28-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 AM393_RS21835 8faaa6ec9fa6dd1a2f2df124a31b397a 389 Gene3D G3DSA:3.40.630.10 1 270 5.7E-63 T 28-03-2018 AM393_RS21835 8faaa6ec9fa6dd1a2f2df124a31b397a 389 Pfam PF07687 Peptidase dimerisation domain 187 283 1.8E-12 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain AM393_RS21835 8faaa6ec9fa6dd1a2f2df124a31b397a 389 SUPERFAMILY SSF53187 300 388 7.28E-81 T 28-03-2018 AM393_RS21835 8faaa6ec9fa6dd1a2f2df124a31b397a 389 SUPERFAMILY SSF53187 5 199 7.28E-81 T 28-03-2018 AM393_RS21835 8faaa6ec9fa6dd1a2f2df124a31b397a 389 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 17 375 1.7E-102 T 28-03-2018 IPR017439 Amidohydrolase GO:0016787 AM393_RS21835 8faaa6ec9fa6dd1a2f2df124a31b397a 389 SUPERFAMILY SSF55031 185 291 8.64E-28 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain AM393_RS21835 8faaa6ec9fa6dd1a2f2df124a31b397a 389 Gene3D G3DSA:3.40.630.10 271 389 3.3E-19 T 28-03-2018 AM393_RS21835 8faaa6ec9fa6dd1a2f2df124a31b397a 389 PIRSF PIRSF005962 2 389 8.4E-118 T 28-03-2018 IPR017439 Amidohydrolase GO:0016787 AM393_RS02975 66c67b39d271cc5aff0bdf1b2b21a2e1 152 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 1 101 1.1E-19 T 28-03-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain AM393_RS02975 66c67b39d271cc5aff0bdf1b2b21a2e1 152 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 53 90 - T 28-03-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 AM393_RS02975 66c67b39d271cc5aff0bdf1b2b21a2e1 152 Gene3D G3DSA:3.40.140.10 1 152 7.5E-36 T 28-03-2018 AM393_RS02975 66c67b39d271cc5aff0bdf1b2b21a2e1 152 SUPERFAMILY SSF53927 2 143 1.24E-36 T 28-03-2018 IPR016193 Cytidine deaminase-like GO:0003824 AM393_RS18260 d1348cf26fc000d84f9118a96c990f85 69 PRINTS PR00050 Cold shock protein signature 6 21 1.8E-18 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM393_RS18260 d1348cf26fc000d84f9118a96c990f85 69 PRINTS PR00050 Cold shock protein signature 27 36 1.8E-18 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM393_RS18260 d1348cf26fc000d84f9118a96c990f85 69 PRINTS PR00050 Cold shock protein signature 42 60 1.8E-18 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM393_RS18260 d1348cf26fc000d84f9118a96c990f85 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 17 36 - T 28-03-2018 IPR019844 Cold-shock conserved site AM393_RS18260 d1348cf26fc000d84f9118a96c990f85 69 Pfam PF00313 'Cold-shock' DNA-binding domain 5 68 1.1E-33 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM393_RS18260 d1348cf26fc000d84f9118a96c990f85 69 SUPERFAMILY SSF50249 3 68 5.36E-26 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM393_RS18260 d1348cf26fc000d84f9118a96c990f85 69 PIRSF PIRSF002599 1 69 8.9E-27 T 28-03-2018 IPR012156 Cold shock, CspA GO:0003676 AM393_RS18260 d1348cf26fc000d84f9118a96c990f85 69 SMART SM00357 5 69 2.4E-33 T 28-03-2018 IPR011129 Cold shock domain GO:0003676 AM393_RS18260 d1348cf26fc000d84f9118a96c990f85 69 Gene3D G3DSA:2.40.50.140 1 69 4.0E-29 T 28-03-2018 AM393_RS15935 9b007f2fc03c7d7294cf674aec85e9f0 841 Pfam PF15976 CS1-pili formation C-terminal 732 824 1.6E-28 T 28-03-2018 IPR031917 Pilus assembly protein, C-terminal domain AM393_RS15935 9b007f2fc03c7d7294cf674aec85e9f0 841 Gene3D G3DSA:2.60.40.1120 749 817 0.0026 T 28-03-2018 AM393_RS15935 9b007f2fc03c7d7294cf674aec85e9f0 841 SUPERFAMILY SSF49464 749 810 1.1E-5 T 28-03-2018 IPR008969 Carboxypeptidase-like, regulatory domain AM393_RS15935 9b007f2fc03c7d7294cf674aec85e9f0 841 Pfam PF16967 E-set like domain 283 350 8.9E-26 T 28-03-2018 IPR032636 Pilus assembly protein, E-set like domain AM393_RS22480 63c527f9f53300583f099428ea6e8225 268 Pfam PF03180 NLPA lipoprotein 28 263 2.3E-51 T 28-03-2018 IPR004872 Lipoprotein NlpA family AM393_RS22480 63c527f9f53300583f099428ea6e8225 268 Gene3D G3DSA:3.40.190.10 26 118 3.6E-10 T 28-03-2018 AM393_RS22480 63c527f9f53300583f099428ea6e8225 268 Gene3D G3DSA:3.40.190.10 123 265 1.0E-30 T 28-03-2018 AM393_RS22480 63c527f9f53300583f099428ea6e8225 268 SUPERFAMILY SSF53850 28 264 1.09E-47 T 28-03-2018 AM393_RS08195 a6e132f1802451f01e4dcfb322e4f6e6 128 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 28-03-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS08195 a6e132f1802451f01e4dcfb322e4f6e6 128 Gene3D G3DSA:3.90.1030.10 1 117 3.2E-50 T 28-03-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS08195 a6e132f1802451f01e4dcfb322e4f6e6 128 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 27.022 T 28-03-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS08195 a6e132f1802451f01e4dcfb322e4f6e6 128 SUPERFAMILY SSF64263 1 118 5.23E-51 T 28-03-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS08195 a6e132f1802451f01e4dcfb322e4f6e6 128 Pfam PF01196 Ribosomal protein L17 20 116 1.3E-34 T 28-03-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS08195 a6e132f1802451f01e4dcfb322e4f6e6 128 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 6.9E-51 T 28-03-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS14230 dc7ade486d858b7750b87df17c187a06 239 Pfam PF01048 Phosphorylase superfamily 15 218 1.3E-40 T 28-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AM393_RS14230 dc7ade486d858b7750b87df17c187a06 239 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 62 77 - T 28-03-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 AM393_RS14230 dc7ade486d858b7750b87df17c187a06 239 Gene3D G3DSA:3.40.50.1580 9 235 7.9E-57 T 28-03-2018 AM393_RS14230 dc7ade486d858b7750b87df17c187a06 239 SUPERFAMILY SSF53167 3 234 4.19E-94 T 28-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AM393_RS14230 dc7ade486d858b7750b87df17c187a06 239 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 2 235 52.397 T 28-03-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 AM393_RS14230 dc7ade486d858b7750b87df17c187a06 239 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 5 234 9.1E-126 T 28-03-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 AM393_RS20970 485390a259ef827a54c92e4cdc734390 368 Gene3D G3DSA:2.30.30.280 213 280 8.9E-29 T 28-03-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 Reactome: R-HSA-6787450 AM393_RS20970 485390a259ef827a54c92e4cdc734390 368 Gene3D G3DSA:2.40.30.10 282 368 5.3E-29 T 28-03-2018 AM393_RS20970 485390a259ef827a54c92e4cdc734390 368 SUPERFAMILY SSF52402 4 295 1.08E-57 T 28-03-2018 AM393_RS20970 485390a259ef827a54c92e4cdc734390 368 Gene3D G3DSA:3.40.50.620 1 212 1.1E-65 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM393_RS20970 485390a259ef827a54c92e4cdc734390 368 Pfam PF03054 tRNA methyl transferase 6 360 3.9E-144 T 28-03-2018 AM393_RS20970 485390a259ef827a54c92e4cdc734390 368 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 6 361 40.79 T 28-03-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 Reactome: R-HSA-6787450 AM393_RS20970 485390a259ef827a54c92e4cdc734390 368 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 6 360 2.2E-158 T 28-03-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 Reactome: R-HSA-6787450 AM393_RS16405 46d188f273b227598dcd171769a07982 273 Gene3D G3DSA:3.40.50.720 120 254 1.2E-23 T 28-03-2018 AM393_RS16405 46d188f273b227598dcd171769a07982 273 SUPERFAMILY SSF51735 108 254 1.88E-24 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS16405 46d188f273b227598dcd171769a07982 273 SUPERFAMILY SSF53223 2 105 2.24E-23 T 28-03-2018 AM393_RS16405 46d188f273b227598dcd171769a07982 273 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 11 94 2.6E-19 T 28-03-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 AM393_RS16405 46d188f273b227598dcd171769a07982 273 Gene3D G3DSA:3.40.50.10860 1 119 9.3E-29 T 28-03-2018 AM393_RS15670 bb66e17d7fe106d9e51e30b90b4ff153 414 Pfam PF06500 Alpha/beta hydrolase of unknown function (DUF1100) 1 412 9.9E-201 T 28-03-2018 IPR010520 UPF0255 family AM393_RS15670 bb66e17d7fe106d9e51e30b90b4ff153 414 SUPERFAMILY SSF53474 46 413 1.57E-54 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AM393_RS15670 bb66e17d7fe106d9e51e30b90b4ff153 414 Gene3D G3DSA:1.20.1440.110 49 153 1.8E-23 T 28-03-2018 AM393_RS15670 bb66e17d7fe106d9e51e30b90b4ff153 414 Hamap MF_01063 Esterase FrsA [frsA]. 1 414 59.961 T 28-03-2018 IPR010520 UPF0255 family AM393_RS15670 bb66e17d7fe106d9e51e30b90b4ff153 414 Gene3D G3DSA:3.40.50.1820 154 414 3.6E-23 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AM393_RS21025 3f0a8bb8f2a086d14deb21efa4cdaf8f 168 Gene3D G3DSA:1.20.1260.10 1 168 2.5E-31 T 28-03-2018 IPR012347 Ferritin-related AM393_RS21025 3f0a8bb8f2a086d14deb21efa4cdaf8f 168 SUPERFAMILY SSF47240 5 155 1.86E-45 T 28-03-2018 IPR009078 Ferritin-like superfamily AM393_RS21025 3f0a8bb8f2a086d14deb21efa4cdaf8f 168 Pfam PF05974 Domain of unknown function (DUF892) 5 156 5.4E-48 T 28-03-2018 IPR010287 Domain of unknown function DUF892 AM393_RS19535 13acb00ce7c57dd1d61e14d339c449d0 154 Pfam PF05926 Phage head completion protein (GPL) 16 154 4.8E-52 T 28-03-2018 IPR009225 Bacteriophage head completion protein GpL GO:0019069 AM393_RS00570 f2ba101b05562f908705dac76ac66b76 159 Gene3D G3DSA:1.20.5.170 26 150 4.3E-6 T 28-03-2018 AM393_RS00570 f2ba101b05562f908705dac76ac66b76 159 Pfam PF03245 Bacteriophage Rz lysis protein 31 152 2.3E-38 T 28-03-2018 IPR004929 Spanin, inner membrane subunit GO:0019076|GO:0019835 AM393_RS12435 d9c280510c0b853f52eecf5accef9fed 241 Gene3D G3DSA:3.40.1410.10 79 241 7.4E-34 T 28-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AM393_RS12435 d9c280510c0b853f52eecf5accef9fed 241 Pfam PF07702 UTRA domain 96 235 8.0E-30 T 28-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AM393_RS12435 d9c280510c0b853f52eecf5accef9fed 241 SUPERFAMILY SSF64288 63 240 6.44E-38 T 28-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AM393_RS12435 d9c280510c0b853f52eecf5accef9fed 241 SMART SM00866 96 236 1.0E-26 T 28-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AM393_RS12435 d9c280510c0b853f52eecf5accef9fed 241 SMART SM00345 17 75 9.2E-24 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM393_RS12435 d9c280510c0b853f52eecf5accef9fed 241 SUPERFAMILY SSF46785 8 83 8.69E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS12435 d9c280510c0b853f52eecf5accef9fed 241 TIGRFAM TIGR02325 C_P_lyase_phnF: phosphonate metabolism transcriptional regulator PhnF 6 241 1.7E-95 T 28-03-2018 IPR012702 Phosphonate C-P lyase system, transcriptional regulator PhnF AM393_RS12435 d9c280510c0b853f52eecf5accef9fed 241 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 35 49 2.1E-8 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM393_RS12435 d9c280510c0b853f52eecf5accef9fed 241 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 49 65 2.1E-8 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM393_RS12435 d9c280510c0b853f52eecf5accef9fed 241 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 75 1.4E-20 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM393_RS12435 d9c280510c0b853f52eecf5accef9fed 241 Gene3D G3DSA:1.10.10.10 4 76 2.2E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS28355 c0b8c954ffc0c84db02d0f61e7cf88fc 147 Gene3D G3DSA:1.10.1220.10 102 146 6.3E-9 T 28-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 AM393_RS28355 c0b8c954ffc0c84db02d0f61e7cf88fc 147 Gene3D G3DSA:3.30.2390.10 3 74 1.3E-4 T 28-03-2018 IPR035069 TTHA1013/TTHA0281-like AM393_RS28355 c0b8c954ffc0c84db02d0f61e7cf88fc 147 Pfam PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system 5 138 5.7E-24 T 28-03-2018 IPR031807 HicB-like antitoxin of toxin-antitoxin system AM393_RS23600 bdd106f3460600a69a1162ae398bad13 250 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 205 250 4.7E-13 T 28-03-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 AM393_RS23600 bdd106f3460600a69a1162ae398bad13 250 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 18 173 1.6E-39 T 28-03-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 AM393_RS23600 bdd106f3460600a69a1162ae398bad13 250 Gene3D G3DSA:3.40.50.720 2 250 2.3E-63 T 28-03-2018 AM393_RS23600 bdd106f3460600a69a1162ae398bad13 250 SUPERFAMILY SSF51735 3 250 4.33E-66 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS17635 d8bbe9e2d674e14fe2bcdce976b540cf 845 Pfam PF15976 CS1-pili formation C-terminal 737 829 1.1E-20 T 28-03-2018 IPR031917 Pilus assembly protein, C-terminal domain AM393_RS17635 d8bbe9e2d674e14fe2bcdce976b540cf 845 Pfam PF16967 E-set like domain 282 346 7.4E-24 T 28-03-2018 IPR032636 Pilus assembly protein, E-set like domain AM393_RS20295 753171ac6afc9d3c8ac275fb546bf1ce 550 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 83 461 3.5E-87 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain AM393_RS20295 753171ac6afc9d3c8ac275fb546bf1ce 550 PIRSF PIRSF002741 3 543 4.7E-113 T 28-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AM393_RS20295 753171ac6afc9d3c8ac275fb546bf1ce 550 SUPERFAMILY SSF53850 36 539 5.12E-143 T 28-03-2018 AM393_RS20295 753171ac6afc9d3c8ac275fb546bf1ce 550 Gene3D G3DSA:3.10.105.10 312 512 5.2E-56 T 28-03-2018 AM393_RS20295 753171ac6afc9d3c8ac275fb546bf1ce 550 Gene3D G3DSA:3.40.190.10 177 311 9.5E-42 T 28-03-2018 AM393_RS20295 753171ac6afc9d3c8ac275fb546bf1ce 550 Gene3D G3DSA:3.90.76.10 56 176 1.7E-33 T 28-03-2018 AM393_RS15600 fe4e2063187534e497dd7f496c4cfeb2 246 Pfam PF03734 L,D-transpeptidase catalytic domain 44 159 2.7E-6 T 28-03-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 AM393_RS15600 fe4e2063187534e497dd7f496c4cfeb2 246 SUPERFAMILY SSF141523 42 159 1.57E-9 T 28-03-2018 AM393_RS15600 fe4e2063187534e497dd7f496c4cfeb2 246 Gene3D G3DSA:2.40.440.10 39 174 2.5E-7 T 28-03-2018 AM393_RS25650 b20ea238591dea5e3eb2f2c99a624981 211 SMART SM00947 27 193 1.6E-62 T 28-03-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AM393_RS25650 b20ea238591dea5e3eb2f2c99a624981 211 Pfam PF00484 Carbonic anhydrase 34 188 1.7E-47 T 28-03-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AM393_RS25650 b20ea238591dea5e3eb2f2c99a624981 211 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 39 46 - T 28-03-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AM393_RS25650 b20ea238591dea5e3eb2f2c99a624981 211 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 82 102 - T 28-03-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AM393_RS25650 b20ea238591dea5e3eb2f2c99a624981 211 SUPERFAMILY SSF53056 1 204 1.26E-64 T 28-03-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AM393_RS25650 b20ea238591dea5e3eb2f2c99a624981 211 Gene3D G3DSA:3.40.1050.10 1 208 1.6E-65 T 28-03-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AM393_RS15930 8637869eb013c2c1ef1db35edd8c9173 222 SUPERFAMILY SSF49354 20 114 2.88E-5 T 28-03-2018 IPR008962 PapD-like AM393_RS15930 8637869eb013c2c1ef1db35edd8c9173 222 Gene3D G3DSA:2.60.40.10 21 146 1.9E-11 T 28-03-2018 IPR013783 Immunoglobulin-like fold AM393_RS16970 d23125f72e403d2d3c2458fb5950d68b 281 TIGRFAM TIGR01913 bet_lambda: phage recombination protein Bet 24 196 1.9E-38 T 28-03-2018 IPR010183 Bacteriophage lambda, Bet AM393_RS16970 d23125f72e403d2d3c2458fb5950d68b 281 Pfam PF03837 RecT family 21 198 6.0E-26 T 28-03-2018 IPR018330 RecT family GO:0003677|GO:0006259 AM393_RS19115 65292c792cdb851e18d483ab3937f57b 377 Pfam PF12698 ABC-2 family transporter protein 29 370 5.0E-38 T 28-03-2018 AM393_RS19115 65292c792cdb851e18d483ab3937f57b 377 Gene3D G3DSA:3.40.1710.10 45 196 9.6E-23 T 28-03-2018 AM393_RS02595 7bded43a635e2a9b42c032ab95a1df09 141 SUPERFAMILY SSF55811 2 127 1.76E-26 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 AM393_RS02595 7bded43a635e2a9b42c032ab95a1df09 141 Pfam PF00293 NUDIX domain 1 129 2.9E-19 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AM393_RS02595 7bded43a635e2a9b42c032ab95a1df09 141 PRINTS PR00502 NUDIX hydrolase family signature 47 62 2.4E-6 T 28-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AM393_RS02595 7bded43a635e2a9b42c032ab95a1df09 141 PRINTS PR00502 NUDIX hydrolase family signature 33 47 2.4E-6 T 28-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AM393_RS02595 7bded43a635e2a9b42c032ab95a1df09 141 Gene3D G3DSA:3.90.79.10 1 139 2.4E-27 T 28-03-2018 AM393_RS02595 7bded43a635e2a9b42c032ab95a1df09 141 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 28-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AM393_RS02595 7bded43a635e2a9b42c032ab95a1df09 141 Hamap MF_01846 Nucleoside triphosphatase NudI [nudI]. 1 141 42.804 T 28-03-2018 IPR023781 Nucleoside triphosphatase NudI GO:0016818 KEGG: 00240+3.6.1.23+3.6.1.12 AM393_RS28420 cf4e2154edd767653227832e05f9b8ce 208 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 3 179 4.8E-12 T 28-03-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain AM393_RS28420 cf4e2154edd767653227832e05f9b8ce 208 Gene3D G3DSA:3.40.50.300 1 207 2.1E-32 T 28-03-2018 AM393_RS28420 cf4e2154edd767653227832e05f9b8ce 208 PIRSF PIRSF009320 1 208 2.0E-77 T 28-03-2018 AM393_RS28420 cf4e2154edd767653227832e05f9b8ce 208 SUPERFAMILY SSF52540 1 206 2.82E-35 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS01235 ce4a157ab1fa1ce769a562f94f7eb59e 600 SUPERFAMILY SSF52540 339 581 5.23E-85 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS01235 ce4a157ab1fa1ce769a562f94f7eb59e 600 ProSitePatterns PS00211 ABC transporters family signature. 482 496 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS01235 ce4a157ab1fa1ce769a562f94f7eb59e 600 SMART SM00382 370 562 2.0E-13 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS01235 ce4a157ab1fa1ce769a562f94f7eb59e 600 SUPERFAMILY SSF90123 17 331 3.53E-37 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AM393_RS01235 ce4a157ab1fa1ce769a562f94f7eb59e 600 Gene3D G3DSA:1.20.1560.10 11 333 1.3E-25 T 28-03-2018 AM393_RS01235 ce4a157ab1fa1ce769a562f94f7eb59e 600 Pfam PF00005 ABC transporter 361 510 1.9E-29 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS01235 ce4a157ab1fa1ce769a562f94f7eb59e 600 Pfam PF00664 ABC transporter transmembrane region 34 291 4.1E-7 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AM393_RS01235 ce4a157ab1fa1ce769a562f94f7eb59e 600 Gene3D G3DSA:3.40.50.300 334 586 1.6E-74 T 28-03-2018 AM393_RS01870 ce1e8d5ef7469d30bf5a18fb4c19023d 203 Pfam PF00196 Bacterial regulatory proteins, luxR family 141 191 5.2E-5 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS01870 ce1e8d5ef7469d30bf5a18fb4c19023d 203 SUPERFAMILY SSF46894 134 196 1.12E-9 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM393_RS01870 ce1e8d5ef7469d30bf5a18fb4c19023d 203 Gene3D G3DSA:1.10.10.10 96 200 2.8E-7 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS01870 ce1e8d5ef7469d30bf5a18fb4c19023d 203 SMART SM00421 139 196 0.0027 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS28725 d4edc687f041c32cdf705526f6629f8f 203 Pfam PF11140 Protein of unknown function (DUF2913) 9 173 4.1E-30 T 28-03-2018 IPR021316 Protein of unknown function DUF2913 AM393_RS03375 e10b0ab2393896e5723c7f861485659a 237 Gene3D G3DSA:3.30.470.20 94 220 6.0E-45 T 28-03-2018 AM393_RS03375 e10b0ab2393896e5723c7f861485659a 237 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 3 235 1.0E-83 T 28-03-2018 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 AM393_RS03375 e10b0ab2393896e5723c7f861485659a 237 Gene3D G3DSA:3.30.200.20 1 93 2.3E-24 T 28-03-2018 AM393_RS03375 e10b0ab2393896e5723c7f861485659a 237 SUPERFAMILY SSF56104 3 232 9.48E-76 T 28-03-2018 AM393_RS03375 e10b0ab2393896e5723c7f861485659a 237 Pfam PF01259 SAICAR synthetase 7 231 1.1E-58 T 28-03-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AM393_RS03375 e10b0ab2393896e5723c7f861485659a 237 ProSitePatterns PS01057 SAICAR synthetase signature 1. 86 100 - T 28-03-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AM393_RS03375 e10b0ab2393896e5723c7f861485659a 237 ProSitePatterns PS01058 SAICAR synthetase signature 2. 173 181 - T 28-03-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AM393_RS03375 e10b0ab2393896e5723c7f861485659a 237 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 4 234 28.982 T 28-03-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AM393_RS03405 f758859a9a5f033772ac921d5fa849cc 487 Pfam PF14559 Tetratricopeptide repeat 354 418 1.8E-7 T 28-03-2018 AM393_RS03405 f758859a9a5f033772ac921d5fa849cc 487 SUPERFAMILY SSF48452 313 428 7.94E-9 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM393_RS03405 f758859a9a5f033772ac921d5fa849cc 487 Gene3D G3DSA:3.30.2010.10 68 148 1.4E-16 T 28-03-2018 AM393_RS03405 f758859a9a5f033772ac921d5fa849cc 487 Gene3D G3DSA:1.25.40.10 149 373 1.4E-5 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM393_RS03405 f758859a9a5f033772ac921d5fa849cc 487 Hamap MF_00997 Beta-barrel assembly-enhancing protease [bepA]. 4 484 40.944 T 28-03-2018 IPR030873 Beta-barrel assembly-enhancing protease GO:0006508|GO:0008237|GO:0016020|GO:0061077 AM393_RS03405 f758859a9a5f033772ac921d5fa849cc 487 Pfam PF01435 Peptidase family M48 79 259 1.4E-26 T 28-03-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 AM393_RS03405 f758859a9a5f033772ac921d5fa849cc 487 Gene3D G3DSA:1.25.20.10 374 486 5.1E-8 T 28-03-2018 AM393_RS16910 cfbf66ed34af281a4dbd93c83366c341 70 SUPERFAMILY SSF55174 7 68 2.75E-19 T 28-03-2018 AM393_RS16910 cfbf66ed34af281a4dbd93c83366c341 70 Pfam PF13275 S4 domain 9 68 6.3E-24 T 28-03-2018 AM393_RS16910 cfbf66ed34af281a4dbd93c83366c341 70 Gene3D G3DSA:3.10.290.10 1 70 4.2E-12 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AM393_RS21385 7b7fbdd95d139222d445ad8351b477a7 207 Pfam PF01066 CDP-alcohol phosphatidyltransferase 27 89 9.8E-9 T 28-03-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AM393_RS21385 7b7fbdd95d139222d445ad8351b477a7 207 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 68 89 - T 28-03-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AM393_RS25830 3fc732be01e9511c1870ab0a4df38bc7 235 Gene3D G3DSA:3.40.1080.10 1 233 1.7E-94 T 28-03-2018 AM393_RS25830 3fc732be01e9511c1870ab0a4df38bc7 235 SMART SM00882 8 219 3.6E-86 T 28-03-2018 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 Reactome: R-HSA-77108 AM393_RS25830 3fc732be01e9511c1870ab0a4df38bc7 235 SUPERFAMILY SSF100950 5 227 1.73E-86 T 28-03-2018 AM393_RS25830 3fc732be01e9511c1870ab0a4df38bc7 235 Pfam PF01144 Coenzyme A transferase 11 217 1.1E-74 T 28-03-2018 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 Reactome: R-HSA-77108 AM393_RS25830 3fc732be01e9511c1870ab0a4df38bc7 235 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 4 217 1.8E-74 T 28-03-2018 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 Reactome: R-HSA-77108 AM393_RS25830 3fc732be01e9511c1870ab0a4df38bc7 235 ProSitePatterns PS01273 Coenzyme A transferases signature 1. 20 35 - T 28-03-2018 IPR004163 Coenzyme A transferase binding site GO:0008152|GO:0008410 Reactome: R-HSA-77108 AM393_RS12300 1843a63876eca785ec4ae0ae41e09e67 365 Pfam PF00419 Fimbrial protein 203 364 5.0E-10 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM393_RS12300 1843a63876eca785ec4ae0ae41e09e67 365 Gene3D G3DSA:2.60.40.1090 207 365 3.1E-23 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM393_RS12300 1843a63876eca785ec4ae0ae41e09e67 365 SUPERFAMILY SSF49401 208 365 3.93E-13 T 28-03-2018 IPR008966 Adhesion domain AM393_RS12300 1843a63876eca785ec4ae0ae41e09e67 365 Gene3D G3DSA:2.60.40.1090 18 172 0.09 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM393_RS05305 f7a0ad254f432f315c1696e53abcbb2f 462 PIRSF PIRSF036410 1 462 1.6E-210 T 28-03-2018 IPR012408 Acetaldehyde/propionaldehyde dehydrogenase, EutE/PduP-related AM393_RS05305 f7a0ad254f432f315c1696e53abcbb2f 462 Gene3D G3DSA:3.40.605.10 31 252 2.4E-33 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AM393_RS05305 f7a0ad254f432f315c1696e53abcbb2f 462 Gene3D G3DSA:3.40.309.10 253 423 2.4E-23 T 28-03-2018 AM393_RS05305 f7a0ad254f432f315c1696e53abcbb2f 462 Pfam PF00171 Aldehyde dehydrogenase family 34 291 2.9E-25 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AM393_RS05305 f7a0ad254f432f315c1696e53abcbb2f 462 SUPERFAMILY SSF53720 34 455 8.77E-59 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AM393_RS27695 e505972cd4de0604b60e247d7bd62662 331 Pfam PF01548 Transposase 4 157 3.8E-24 T 28-03-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 AM393_RS27695 e505972cd4de0604b60e247d7bd62662 331 Pfam PF02371 Transposase IS116/IS110/IS902 family 201 285 9.1E-18 T 28-03-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 AM393_RS18945 7a7df27fcd19df738a27a6b19e8331ce 405 SUPERFAMILY SSF51556 66 365 2.19E-82 T 28-03-2018 IPR032466 Metal-dependent hydrolase AM393_RS18945 7a7df27fcd19df738a27a6b19e8331ce 405 Pfam PF01979 Amidohydrolase family 63 383 2.0E-12 T 28-03-2018 IPR006680 Amidohydrolase-related GO:0016787 AM393_RS18945 7a7df27fcd19df738a27a6b19e8331ce 405 TIGRFAM TIGR01224 hutI: imidazolonepropionase 31 403 6.9E-142 T 28-03-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AM393_RS18945 7a7df27fcd19df738a27a6b19e8331ce 405 SUPERFAMILY SSF51338 367 404 4.32E-27 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM393_RS18945 7a7df27fcd19df738a27a6b19e8331ce 405 SUPERFAMILY SSF51338 9 66 4.32E-27 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM393_RS18945 7a7df27fcd19df738a27a6b19e8331ce 405 Hamap MF_00372 Imidazolonepropionase [hutI]. 7 405 40.626 T 28-03-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AM393_RS18945 7a7df27fcd19df738a27a6b19e8331ce 405 Gene3D G3DSA:2.30.40.10 7 79 5.2E-20 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM393_RS18945 7a7df27fcd19df738a27a6b19e8331ce 405 Gene3D G3DSA:3.20.20.140 80 365 1.4E-53 T 28-03-2018 AM393_RS11595 d71b11b3feba7c5e66c69353d04c5474 483 PIRSF PIRSF006247 1 483 1.7E-185 T 28-03-2018 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 AM393_RS11595 d71b11b3feba7c5e66c69353d04c5474 483 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 84 466 1.2E-127 T 28-03-2018 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 AM393_RS11595 d71b11b3feba7c5e66c69353d04c5474 483 Pfam PF02386 Cation transport protein 37 477 3.7E-93 T 28-03-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 AM393_RS23115 9cb88af7e9689ec2142d38fd880645c3 300 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 6 288 1.4E-14 T 28-03-2018 IPR020801 Polyketide synthase, acyl transferase domain AM393_RS23115 9cb88af7e9689ec2142d38fd880645c3 300 Gene3D G3DSA:3.30.70.250 129 174 4.7E-14 T 28-03-2018 AM393_RS23115 9cb88af7e9689ec2142d38fd880645c3 300 Pfam PF00698 Acyl transferase domain 5 274 1.1E-20 T 28-03-2018 IPR014043 Acyl transferase AM393_RS23115 9cb88af7e9689ec2142d38fd880645c3 300 SUPERFAMILY SSF52151 2 119 1.8E-45 T 28-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 AM393_RS23115 9cb88af7e9689ec2142d38fd880645c3 300 SUPERFAMILY SSF52151 184 275 1.8E-45 T 28-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 AM393_RS23115 9cb88af7e9689ec2142d38fd880645c3 300 TIGRFAM TIGR03131 malonate_mdcH: malonate decarboxylase, epsilon subunit 3 285 1.2E-95 T 28-03-2018 IPR017554 Malonate decarboxylase, McdH subunit AM393_RS23115 9cb88af7e9689ec2142d38fd880645c3 300 Gene3D G3DSA:3.40.366.10 175 287 2.0E-19 T 28-03-2018 AM393_RS23115 9cb88af7e9689ec2142d38fd880645c3 300 PIRSF PIRSF000446 1 294 2.2E-53 T 28-03-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 AM393_RS23115 9cb88af7e9689ec2142d38fd880645c3 300 Gene3D G3DSA:3.40.366.10 2 128 1.2E-19 T 28-03-2018 AM393_RS23115 9cb88af7e9689ec2142d38fd880645c3 300 SUPERFAMILY SSF55048 120 176 1.31E-10 T 28-03-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 AM393_RS12130 323396f9f3c303f24ceefeccff7ae92d 118 Pfam PF04237 YjbR 12 102 4.0E-18 T 28-03-2018 IPR007351 Uncharacterised protein YjbR AM393_RS12130 323396f9f3c303f24ceefeccff7ae92d 118 SUPERFAMILY SSF142906 1 116 9.81E-34 T 28-03-2018 AM393_RS01650 4b24069be1d41db6ceccd7810bb69ab9 434 PRINTS PR00083 Histidinol dehydrogenase signature 109 136 5.5E-101 T 28-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AM393_RS01650 4b24069be1d41db6ceccd7810bb69ab9 434 PRINTS PR00083 Histidinol dehydrogenase signature 198 223 5.5E-101 T 28-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AM393_RS01650 4b24069be1d41db6ceccd7810bb69ab9 434 PRINTS PR00083 Histidinol dehydrogenase signature 36 60 5.5E-101 T 28-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AM393_RS01650 4b24069be1d41db6ceccd7810bb69ab9 434 PRINTS PR00083 Histidinol dehydrogenase signature 168 194 5.5E-101 T 28-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AM393_RS01650 4b24069be1d41db6ceccd7810bb69ab9 434 PRINTS PR00083 Histidinol dehydrogenase signature 320 345 5.5E-101 T 28-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AM393_RS01650 4b24069be1d41db6ceccd7810bb69ab9 434 PRINTS PR00083 Histidinol dehydrogenase signature 361 379 5.5E-101 T 28-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AM393_RS01650 4b24069be1d41db6ceccd7810bb69ab9 434 PRINTS PR00083 Histidinol dehydrogenase signature 230 251 5.5E-101 T 28-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AM393_RS01650 4b24069be1d41db6ceccd7810bb69ab9 434 PRINTS PR00083 Histidinol dehydrogenase signature 252 271 5.5E-101 T 28-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AM393_RS01650 4b24069be1d41db6ceccd7810bb69ab9 434 Pfam PF00815 Histidinol dehydrogenase 28 427 4.3E-163 T 28-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AM393_RS01650 4b24069be1d41db6ceccd7810bb69ab9 434 Gene3D G3DSA:3.40.50.1980 226 371 1.1E-69 T 28-03-2018 AM393_RS01650 4b24069be1d41db6ceccd7810bb69ab9 434 SUPERFAMILY SSF53720 6 427 8.04E-90 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AM393_RS01650 4b24069be1d41db6ceccd7810bb69ab9 434 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 36 426 2.0E-158 T 28-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AM393_RS01650 4b24069be1d41db6ceccd7810bb69ab9 434 Gene3D G3DSA:3.40.50.1980 29 225 1.9E-85 T 28-03-2018 AM393_RS01650 4b24069be1d41db6ceccd7810bb69ab9 434 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 230 262 - T 28-03-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 AM393_RS01650 4b24069be1d41db6ceccd7810bb69ab9 434 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 7 427 40.634 T 28-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AM393_RS01650 4b24069be1d41db6ceccd7810bb69ab9 434 PIRSF PIRSF000099 1 430 4.9E-166 T 28-03-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AM393_RS17230 242b0c20b523514b41bbef101bf53d05 131 Gene3D G3DSA:3.90.1720.10 5 129 2.4E-6 T 28-03-2018 AM393_RS17230 242b0c20b523514b41bbef101bf53d05 131 Pfam PF00877 NlpC/P60 family 21 102 3.2E-6 T 28-03-2018 IPR000064 Endopeptidase, NLPC/P60 domain AM393_RS17230 242b0c20b523514b41bbef101bf53d05 131 SUPERFAMILY SSF54001 12 109 4.02E-6 T 28-03-2018 AM393_RS28665 7ba155a2f3431063c4eef46fedba5bd4 464 Pfam PF01526 Tn3 transposase DDE domain 47 437 3.1E-131 T 28-03-2018 IPR002513 Tn3 transposase DDE domain GO:0004803|GO:0006313 AM393_RS05095 c28b6e5d31df97fe923777e1369d6cf7 74 SUPERFAMILY SSF50182 21 72 2.07E-20 T 28-03-2018 IPR010920 LSM domain AM393_RS05095 c28b6e5d31df97fe923777e1369d6cf7 74 Gene3D G3DSA:2.30.30.100 21 72 6.7E-32 T 28-03-2018 AM393_RS05095 c28b6e5d31df97fe923777e1369d6cf7 74 Pfam PF06004 Bacterial protein of unknown function (DUF903) 23 69 6.2E-25 T 28-03-2018 IPR010305 Protein of unknown function DUF903 AM393_RS21645 187b61beda9f3e714ec019c2bf7e5877 287 Pfam PF02811 PHP domain 11 141 1.8E-7 T 28-03-2018 IPR004013 PHP domain GO:0003824 AM393_RS21645 187b61beda9f3e714ec019c2bf7e5877 287 SMART SM00481 10 77 1.2E-15 T 28-03-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal AM393_RS21645 187b61beda9f3e714ec019c2bf7e5877 287 Gene3D G3DSA:3.20.20.140 9 263 1.1E-39 T 28-03-2018 AM393_RS21645 187b61beda9f3e714ec019c2bf7e5877 287 SUPERFAMILY SSF89550 172 283 3.14E-50 T 28-03-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 AM393_RS21645 187b61beda9f3e714ec019c2bf7e5877 287 SUPERFAMILY SSF89550 9 90 3.14E-50 T 28-03-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 AM393_RS17720 d7d3b374d6902866eb09ee13a074b863 144 Pfam PF03610 PTS system fructose IIA component 4 111 1.2E-17 T 28-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 AM393_RS17720 d7d3b374d6902866eb09ee13a074b863 144 Gene3D G3DSA:3.40.50.510 2 140 2.3E-26 T 28-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 AM393_RS17720 d7d3b374d6902866eb09ee13a074b863 144 SUPERFAMILY SSF53062 3 130 4.06E-29 T 28-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 AM393_RS00195 e60fe4bbcc93ac6c3bebea05f7c68dfc 329 SUPERFAMILY SSF53686 10 320 1.7E-91 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AM393_RS00195 e60fe4bbcc93ac6c3bebea05f7c68dfc 329 Gene3D G3DSA:3.40.50.1100 113 329 4.8E-52 T 28-03-2018 AM393_RS00195 e60fe4bbcc93ac6c3bebea05f7c68dfc 329 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 49 62 - T 28-03-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 AM393_RS00195 e60fe4bbcc93ac6c3bebea05f7c68dfc 329 Gene3D G3DSA:3.40.50.1100 57 112 3.8E-19 T 28-03-2018 AM393_RS00195 e60fe4bbcc93ac6c3bebea05f7c68dfc 329 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 24 312 1.4E-76 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AM393_RS12865 f78a2bc4e78fb5943f678e325c9c1543 102 SUPERFAMILY SSF159871 4 101 1.7E-20 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 AM393_RS12865 f78a2bc4e78fb5943f678e325c9c1543 102 Pfam PF07338 Protein of unknown function (DUF1471) 46 101 5.1E-18 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 AM393_RS12865 f78a2bc4e78fb5943f678e325c9c1543 102 Gene3D G3DSA:3.30.1660.10 35 101 7.5E-19 T 28-03-2018 IPR025543 Dodecin-like AM393_RS14825 65851cfaef9fa1e354a5debd26d9828f 495 Gene3D G3DSA:3.40.1190.10 105 342 2.3E-52 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AM393_RS14825 65851cfaef9fa1e354a5debd26d9828f 495 SUPERFAMILY SSF53244 339 491 1.83E-51 T 28-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AM393_RS14825 65851cfaef9fa1e354a5debd26d9828f 495 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 22 491 4.1E-166 T 28-03-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 AM393_RS14825 65851cfaef9fa1e354a5debd26d9828f 495 SUPERFAMILY SSF53623 105 338 4.58E-78 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AM393_RS14825 65851cfaef9fa1e354a5debd26d9828f 495 Pfam PF01225 Mur ligase family, catalytic domain 25 102 3.0E-12 T 28-03-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 AM393_RS14825 65851cfaef9fa1e354a5debd26d9828f 495 SUPERFAMILY SSF63418 5 103 3.53E-23 T 28-03-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 AM393_RS14825 65851cfaef9fa1e354a5debd26d9828f 495 Gene3D G3DSA:3.90.190.20 343 495 3.2E-49 T 28-03-2018 AM393_RS14825 65851cfaef9fa1e354a5debd26d9828f 495 Gene3D G3DSA:3.40.1390.10 2 104 1.0E-23 T 28-03-2018 AM393_RS14825 65851cfaef9fa1e354a5debd26d9828f 495 Pfam PF08245 Mur ligase middle domain 114 318 2.0E-50 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AM393_RS14825 65851cfaef9fa1e354a5debd26d9828f 495 Pfam PF02875 Mur ligase family, glutamate ligase domain 339 425 3.9E-25 T 28-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AM393_RS14825 65851cfaef9fa1e354a5debd26d9828f 495 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 4 491 35.137 T 28-03-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 AM393_RS08530 91ea471a6b07b3968e25182fb23f973e 225 Pfam PF00834 Ribulose-phosphate 3 epimerase family 6 203 2.2E-91 T 28-03-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AM393_RS08530 91ea471a6b07b3968e25182fb23f973e 225 SUPERFAMILY SSF51366 3 218 6.12E-77 T 28-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AM393_RS08530 91ea471a6b07b3968e25182fb23f973e 225 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 33 47 - T 28-03-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AM393_RS08530 91ea471a6b07b3968e25182fb23f973e 225 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 5 216 3.0E-97 T 28-03-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AM393_RS08530 91ea471a6b07b3968e25182fb23f973e 225 Gene3D G3DSA:3.20.20.70 1 220 1.4E-87 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM393_RS08530 91ea471a6b07b3968e25182fb23f973e 225 PIRSF PIRSF001461 1 225 2.4E-107 T 28-03-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AM393_RS08530 91ea471a6b07b3968e25182fb23f973e 225 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 136 158 - T 28-03-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AM393_RS19045 65c8cf1c6d1127fe55ae73d8619cc45b 546 Gene3D G3DSA:3.40.720.10 227 539 2.5E-22 T 28-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AM393_RS19045 65c8cf1c6d1127fe55ae73d8619cc45b 546 Pfam PF00884 Sulfatase 238 527 6.7E-50 T 28-03-2018 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 AM393_RS19045 65c8cf1c6d1127fe55ae73d8619cc45b 546 SUPERFAMILY SSF53649 239 531 2.24E-19 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AM393_RS19045 65c8cf1c6d1127fe55ae73d8619cc45b 546 Pfam PF08019 Domain of unknown function (DUF1705) 60 208 9.0E-40 T 28-03-2018 IPR012549 Phosphoethanolamine transferase, N-terminal GO:0016021 AM393_RS18570 439abc9ba91472ca95307ba7eee70d53 191 Pfam PF02669 K+-transporting ATPase, c chain 5 186 5.3E-68 T 28-03-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 AM393_RS18570 439abc9ba91472ca95307ba7eee70d53 191 PIRSF PIRSF001296 1 191 1.1E-74 T 28-03-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 AM393_RS18570 439abc9ba91472ca95307ba7eee70d53 191 Hamap MF_00276 Potassium-transporting ATPase KdpC subunit [kdpC]. 1 188 33.291 T 28-03-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 AM393_RS18570 439abc9ba91472ca95307ba7eee70d53 191 TIGRFAM TIGR00681 kdpC: K+-transporting ATPase, C subunit 4 187 4.0E-83 T 28-03-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 AM393_RS02765 439e28b28b2be811a5d3e53d2fe5da87 212 SUPERFAMILY SSF47616 90 207 7.27E-11 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like AM393_RS02765 439e28b28b2be811a5d3e53d2fe5da87 212 Gene3D G3DSA:3.40.30.10 4 100 2.1E-21 T 28-03-2018 AM393_RS02765 439e28b28b2be811a5d3e53d2fe5da87 212 Gene3D G3DSA:1.20.1050.10 101 204 3.9E-14 T 28-03-2018 AM393_RS02765 439e28b28b2be811a5d3e53d2fe5da87 212 SUPERFAMILY SSF52833 13 87 2.02E-16 T 28-03-2018 IPR012336 Thioredoxin-like fold AM393_RS02765 439e28b28b2be811a5d3e53d2fe5da87 212 Pfam PF13417 Glutathione S-transferase, N-terminal domain 15 86 1.2E-10 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AM393_RS02765 439e28b28b2be811a5d3e53d2fe5da87 212 Pfam PF14834 Glutathione S-transferase, C-terminal domain 95 211 7.4E-69 T 28-03-2018 IPR034338 Glutathione S-transferases, subfamily 4, C-terminal KEGG: 00480+2.5.1.18|KEGG: 00980+2.5.1.18|KEGG: 00982+2.5.1.18|MetaCyc: PWY-4061|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7533 AM393_RS04190 af7df4de63856dff1605865447d51139 506 SUPERFAMILY SSF53720 14 498 3.27E-160 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AM393_RS04190 af7df4de63856dff1605865447d51139 506 Gene3D G3DSA:3.40.605.10 15 278 8.4E-89 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AM393_RS04190 af7df4de63856dff1605865447d51139 506 Pfam PF00171 Aldehyde dehydrogenase family 32 493 9.6E-162 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AM393_RS04190 af7df4de63856dff1605865447d51139 506 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 261 268 - T 28-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 AM393_RS04190 af7df4de63856dff1605865447d51139 506 Gene3D G3DSA:3.40.309.10 279 480 6.9E-66 T 28-03-2018 AM393_RS04190 af7df4de63856dff1605865447d51139 506 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 294 305 - T 28-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 AM393_RS25670 ddd907138471d5f2d671df577998fced 232 SUPERFAMILY SSF52777 8 210 2.22E-41 T 28-03-2018 AM393_RS25670 ddd907138471d5f2d671df577998fced 232 Pfam PF00302 Chloramphenicol acetyltransferase 9 200 2.5E-21 T 28-03-2018 IPR001707 Chloramphenicol acetyltransferase GO:0008811 AM393_RS25670 ddd907138471d5f2d671df577998fced 232 ProDom PD002660 TRANSFERASE CHLORAMPHENICOL ACYLTRANSFERASE ACETYLTRANSFERASE ANTIBIOTIC RESISTANCE PLASMID CAT O-ACETYLTRANSFERASE DIRECT 16 200 5.0E-75 T 28-03-2018 IPR001707 Chloramphenicol acetyltransferase GO:0008811 AM393_RS25670 ddd907138471d5f2d671df577998fced 232 Gene3D G3DSA:3.30.559.10 7 212 6.6E-25 T 28-03-2018 AM393_RS25670 ddd907138471d5f2d671df577998fced 232 SMART SM01059 7 204 1.0E-59 T 28-03-2018 IPR001707 Chloramphenicol acetyltransferase GO:0008811 AM393_RS12205 eabc6b305771ac77a600096f464c38ea 379 SUPERFAMILY SSF53850 25 369 2.86E-37 T 28-03-2018 AM393_RS12205 eabc6b305771ac77a600096f464c38ea 379 Gene3D G3DSA:3.40.190.10 25 158 9.1E-13 T 28-03-2018 AM393_RS12205 eabc6b305771ac77a600096f464c38ea 379 Pfam PF13416 Bacterial extracellular solute-binding protein 46 329 1.9E-25 T 28-03-2018 AM393_RS12205 eabc6b305771ac77a600096f464c38ea 379 Gene3D G3DSA:3.40.190.10 159 321 2.6E-28 T 28-03-2018 AM393_RS05600 842bc2d98591dbb44477239986bafb70 234 Gene3D G3DSA:2.40.10.220 106 227 4.5E-14 T 28-03-2018 AM393_RS05600 842bc2d98591dbb44477239986bafb70 234 Gene3D G3DSA:2.30.110.10 6 105 0.0017 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 AM393_RS06090 debab338224e0b128ced3887c9e67faf 249 Gene3D G3DSA:3.40.50.720 159 246 3.2E-21 T 28-03-2018 AM393_RS06090 debab338224e0b128ced3887c9e67faf 249 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM393_RS06090 debab338224e0b128ced3887c9e67faf 249 Gene3D G3DSA:3.40.50.720 4 158 5.0E-43 T 28-03-2018 AM393_RS06090 debab338224e0b128ced3887c9e67faf 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 8.2E-30 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS06090 debab338224e0b128ced3887c9e67faf 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 230 8.2E-30 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS06090 debab338224e0b128ced3887c9e67faf 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 8.2E-30 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS06090 debab338224e0b128ced3887c9e67faf 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 8.2E-30 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS06090 debab338224e0b128ced3887c9e67faf 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 8.2E-30 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS06090 debab338224e0b128ced3887c9e67faf 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 8.2E-30 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS06090 debab338224e0b128ced3887c9e67faf 249 SUPERFAMILY SSF51735 6 247 1.24E-71 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS06090 debab338224e0b128ced3887c9e67faf 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 8.5E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS06090 debab338224e0b128ced3887c9e67faf 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 8.5E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS06090 debab338224e0b128ced3887c9e67faf 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 8.5E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS06090 debab338224e0b128ced3887c9e67faf 249 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 246 1.6E-60 T 28-03-2018 AM393_RS03805 460f74599ef7eda5688a162e3fb87f0c 216 Pfam PF03872 Anti sigma-E protein RseA, N-terminal domain 1 86 2.9E-36 T 28-03-2018 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 AM393_RS03805 460f74599ef7eda5688a162e3fb87f0c 216 Pfam PF03873 Anti sigma-E protein RseA, C-terminal domain 132 186 5.2E-26 T 28-03-2018 IPR005573 Anti sigma-E protein RseA, C-terminal AM393_RS03805 460f74599ef7eda5688a162e3fb87f0c 216 PIRSF PIRSF016938 1 205 5.3E-36 T 28-03-2018 IPR026279 Sigma-E factor negative regulatory protein RseA GO:0006950|GO:0016989 AM393_RS03805 460f74599ef7eda5688a162e3fb87f0c 216 SUPERFAMILY SSF89069 1 66 1.83E-21 T 28-03-2018 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 AM393_RS13110 b37fcc79d566dc5d9f50dde56b198015 120 Gene3D G3DSA:3.40.1400.10 14 118 5.3E-4 T 28-03-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 AM393_RS13110 b37fcc79d566dc5d9f50dde56b198015 120 TIGRFAM TIGR03577 EF_0830: conserved hypothetical protein EF_0830/AHA_3911 4 118 1.3E-67 T 28-03-2018 IPR020034 Conserved hypothetical protein CHP03577, EF0830/AHA3911 AM393_RS13110 b37fcc79d566dc5d9f50dde56b198015 120 Pfam PF14272 Glycine-rich SFCGS 4 117 6.9E-60 T 28-03-2018 IPR020034 Conserved hypothetical protein CHP03577, EF0830/AHA3911 AM393_RS16215 fe506cbb69d84668410570b0c36822c4 286 SUPERFAMILY SSF51569 3 283 1.76E-89 T 28-03-2018 AM393_RS16215 fe506cbb69d84668410570b0c36822c4 286 Gene3D G3DSA:3.20.20.70 1 286 5.3E-91 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM393_RS16215 fe506cbb69d84668410570b0c36822c4 286 Pfam PF01116 Fructose-bisphosphate aldolase class-II 3 284 3.6E-93 T 28-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AM393_RS16215 fe506cbb69d84668410570b0c36822c4 286 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 285 3.6E-95 T 28-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AM393_RS16215 fe506cbb69d84668410570b0c36822c4 286 TIGRFAM TIGR01859 fruc_bis_ald_: fructose-1,6-bisphosphate aldolase, class II 2 285 6.1E-108 T 28-03-2018 IPR011289 Fructose-1,6-bisphosphate aldolase, class 2 GO:0004332|GO:0006096|GO:0008270|GO:0030388 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 AM393_RS16215 fe506cbb69d84668410570b0c36822c4 286 PIRSF PIRSF001359 1 286 6.4E-104 T 28-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AM393_RS02545 a504cc1f893788c40788b0cef0a35f37 419 Hamap MF_00753 Anaerobic glycerol-3-phosphate dehydrogenase subunit B [glpB]. 1 415 44.294 T 28-03-2018 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 AM393_RS02545 a504cc1f893788c40788b0cef0a35f37 419 TIGRFAM TIGR03378 glycerol3P_GlpB: glycerol-3-phosphate dehydrogenase, anaerobic, B subunit 3 411 4.4E-154 T 28-03-2018 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 AM393_RS02545 a504cc1f893788c40788b0cef0a35f37 419 Gene3D G3DSA:3.50.50.60 2 419 2.4E-19 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS02545 a504cc1f893788c40788b0cef0a35f37 419 PIRSF PIRSF000141 1 417 4.9E-150 T 28-03-2018 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 AM393_RS02545 a504cc1f893788c40788b0cef0a35f37 419 Pfam PF00890 FAD binding domain 4 399 6.5E-51 T 28-03-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM393_RS02545 a504cc1f893788c40788b0cef0a35f37 419 SUPERFAMILY SSF51905 247 412 2.98E-19 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS02545 a504cc1f893788c40788b0cef0a35f37 419 SUPERFAMILY SSF51905 1 74 2.98E-19 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS07605 30f6dfbbef341033c0f2adb038133e20 90 SUPERFAMILY SSF47413 4 70 6.75E-28 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM393_RS07605 30f6dfbbef341033c0f2adb038133e20 90 Pfam PF13693 Winged helix-turn-helix DNA-binding 6 80 1.6E-34 T 28-03-2018 AM393_RS07605 30f6dfbbef341033c0f2adb038133e20 90 Gene3D G3DSA:1.10.260.40 1 72 5.2E-10 T 28-03-2018 AM393_RS02005 de8a02c3698ba386fe33cf9d0ad7edbe 105 Pfam PF11776 Nickel/cobalt transporter regulator 45 94 1.5E-18 T 28-03-2018 IPR024572 Nickel/cobalt homeostasis protein RcnB AM393_RS02005 de8a02c3698ba386fe33cf9d0ad7edbe 105 ProDom PD456999 SIGNAL PRECURSOR TRANSMEMBRANE MEMBRANE YOHN INTEGRAL EXPORTED SIMILAR LIPOPROTEIN LIPOPROTEIN 27 94 4.0E-24 T 28-03-2018 IPR024572 Nickel/cobalt homeostasis protein RcnB AM393_RS02005 de8a02c3698ba386fe33cf9d0ad7edbe 105 Gene3D G3DSA:3.10.450.160 26 101 6.4E-13 T 28-03-2018 AM393_RS28565 d608154cd733ab82ce1c29b200b70caa 988 Pfam PF13700 Domain of unknown function (DUF4158) 6 169 3.2E-54 T 28-03-2018 IPR025296 Domain of unknown function DUF4158 AM393_RS28565 d608154cd733ab82ce1c29b200b70caa 988 Pfam PF01526 Tn3 transposase DDE domain 580 966 5.6E-157 T 28-03-2018 IPR002513 Tn3 transposase DDE domain GO:0004803|GO:0006313 AM393_RS01505 bf3cde08220d00739e305d615bbf27fb 278 SUPERFAMILY SSF53474 2 277 3.06E-66 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AM393_RS01505 bf3cde08220d00739e305d615bbf27fb 278 PRINTS PR00111 Alpha/beta hydrolase fold signature 49 64 2.4E-9 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM393_RS01505 bf3cde08220d00739e305d615bbf27fb 278 PRINTS PR00111 Alpha/beta hydrolase fold signature 93 106 2.4E-9 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM393_RS01505 bf3cde08220d00739e305d615bbf27fb 278 PRINTS PR00111 Alpha/beta hydrolase fold signature 221 235 2.4E-9 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM393_RS01505 bf3cde08220d00739e305d615bbf27fb 278 Pfam PF00561 alpha/beta hydrolase fold 24 258 6.5E-29 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM393_RS01505 bf3cde08220d00739e305d615bbf27fb 278 Gene3D G3DSA:3.40.50.1820 1 278 9.7E-72 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AM393_RS09725 6b803a879425e358b0eeb6765db13391 213 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 213 37.078 T 28-03-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AM393_RS09725 6b803a879425e358b0eeb6765db13391 213 Gene3D G3DSA:3.40.50.2020 1 193 9.0E-49 T 28-03-2018 AM393_RS09725 6b803a879425e358b0eeb6765db13391 213 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 10 187 2.7E-70 T 28-03-2018 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AM393_RS09725 6b803a879425e358b0eeb6765db13391 213 SUPERFAMILY SSF53271 2 211 4.54E-51 T 28-03-2018 IPR029057 Phosphoribosyltransferase-like AM393_RS09725 6b803a879425e358b0eeb6765db13391 213 Pfam PF00156 Phosphoribosyl transferase domain 48 159 6.3E-12 T 28-03-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 AM393_RS16375 59ad897a0e3f00a680d65e7909c5006e 392 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 154 277 2.4E-9 T 28-03-2018 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 AM393_RS16375 59ad897a0e3f00a680d65e7909c5006e 392 SUPERFAMILY SSF51735 8 173 7.71E-42 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS16375 59ad897a0e3f00a680d65e7909c5006e 392 SUPERFAMILY SSF55347 149 327 1.96E-28 T 28-03-2018 AM393_RS16375 59ad897a0e3f00a680d65e7909c5006e 392 Gene3D G3DSA:3.30.360.10 161 391 8.8E-37 T 28-03-2018 AM393_RS16375 59ad897a0e3f00a680d65e7909c5006e 392 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 12 142 2.7E-27 T 28-03-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 AM393_RS16375 59ad897a0e3f00a680d65e7909c5006e 392 Gene3D G3DSA:3.40.50.720 2 160 1.5E-30 T 28-03-2018 AM393_RS08155 4deca3e4c28eb4f89c44476f4dfc7dab 169 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 160 3.4E-65 T 28-03-2018 IPR023635 Peptide deformylase AM393_RS08155 4deca3e4c28eb4f89c44476f4dfc7dab 169 Gene3D G3DSA:3.90.45.10 1 169 8.0E-61 T 28-03-2018 IPR023635 Peptide deformylase AM393_RS08155 4deca3e4c28eb4f89c44476f4dfc7dab 169 Hamap MF_00163 Peptide deformylase [def]. 2 162 31.486 T 28-03-2018 IPR023635 Peptide deformylase AM393_RS08155 4deca3e4c28eb4f89c44476f4dfc7dab 169 SUPERFAMILY SSF56420 2 164 1.7E-60 T 28-03-2018 IPR023635 Peptide deformylase AM393_RS08155 4deca3e4c28eb4f89c44476f4dfc7dab 169 PRINTS PR01576 Peptide deformylase signature 33 62 5.2E-38 T 28-03-2018 IPR023635 Peptide deformylase AM393_RS08155 4deca3e4c28eb4f89c44476f4dfc7dab 169 PRINTS PR01576 Peptide deformylase signature 120 149 5.2E-38 T 28-03-2018 IPR023635 Peptide deformylase AM393_RS08155 4deca3e4c28eb4f89c44476f4dfc7dab 169 PRINTS PR01576 Peptide deformylase signature 89 100 5.2E-38 T 28-03-2018 IPR023635 Peptide deformylase AM393_RS08155 4deca3e4c28eb4f89c44476f4dfc7dab 169 PRINTS PR01576 Peptide deformylase signature 101 119 5.2E-38 T 28-03-2018 IPR023635 Peptide deformylase AM393_RS08155 4deca3e4c28eb4f89c44476f4dfc7dab 169 Pfam PF01327 Polypeptide deformylase 4 152 6.6E-50 T 28-03-2018 IPR023635 Peptide deformylase AM393_RS08155 4deca3e4c28eb4f89c44476f4dfc7dab 169 PIRSF PIRSF004749 1 168 9.6E-55 T 28-03-2018 IPR023635 Peptide deformylase AM393_RS21915 7ee621138a993426effa52975b284c81 538 Gene3D G3DSA:3.10.105.10 302 507 6.9E-58 T 28-03-2018 AM393_RS21915 7ee621138a993426effa52975b284c81 538 SUPERFAMILY SSF53850 33 529 3.64E-137 T 28-03-2018 AM393_RS21915 7ee621138a993426effa52975b284c81 538 Gene3D G3DSA:3.40.190.10 206 301 3.6E-22 T 28-03-2018 AM393_RS21915 7ee621138a993426effa52975b284c81 538 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 79 454 9.2E-87 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain AM393_RS21915 7ee621138a993426effa52975b284c81 538 PIRSF PIRSF002741 3 538 4.8E-110 T 28-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AM393_RS21915 7ee621138a993426effa52975b284c81 538 Gene3D G3DSA:3.90.76.10 45 205 1.3E-40 T 28-03-2018 AM393_RS12440 5b08c0ca80e53a361ca734c8272724b6 144 Gene3D G3DSA:3.10.180.10 1 143 4.9E-22 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM393_RS12440 5b08c0ca80e53a361ca734c8272724b6 144 SUPERFAMILY SSF54593 1 139 5.06E-31 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM393_RS12440 5b08c0ca80e53a361ca734c8272724b6 144 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 136 3.2E-4 T 28-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AM393_RS19275 6a04ce04dae732ecdb22fa3b4ca2c7a6 530 Gene3D G3DSA:3.40.50.300 3 282 1.5E-51 T 28-03-2018 AM393_RS19275 6a04ce04dae732ecdb22fa3b4ca2c7a6 530 Gene3D G3DSA:3.40.50.300 283 530 1.1E-49 T 28-03-2018 AM393_RS19275 6a04ce04dae732ecdb22fa3b4ca2c7a6 530 Pfam PF00005 ABC transporter 18 184 9.4E-20 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS19275 6a04ce04dae732ecdb22fa3b4ca2c7a6 530 Pfam PF00005 ABC transporter 336 467 2.2E-24 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS19275 6a04ce04dae732ecdb22fa3b4ca2c7a6 530 SMART SM00382 26 228 5.6E-10 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS19275 6a04ce04dae732ecdb22fa3b4ca2c7a6 530 SMART SM00382 344 521 2.0E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS19275 6a04ce04dae732ecdb22fa3b4ca2c7a6 530 SUPERFAMILY SSF52540 6 237 6.38E-46 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS19275 6a04ce04dae732ecdb22fa3b4ca2c7a6 530 SUPERFAMILY SSF52540 298 523 7.79E-46 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS19275 6a04ce04dae732ecdb22fa3b4ca2c7a6 530 Pfam PF12848 ABC transporter 224 309 5.2E-21 T 28-03-2018 IPR032781 ABC-transporter extension domain AM393_RS14925 334d630b8e27d030fb8c67ca55130ce0 461 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 281 295 - T 28-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 AM393_RS14925 334d630b8e27d030fb8c67ca55130ce0 461 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 9 64 2.7E-4 T 28-03-2018 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 AM393_RS14925 334d630b8e27d030fb8c67ca55130ce0 461 Pfam PF00437 Type II/IV secretion system protein 87 353 7.0E-84 T 28-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 AM393_RS14925 334d630b8e27d030fb8c67ca55130ce0 461 Gene3D G3DSA:3.30.450.90 49 186 5.7E-43 T 28-03-2018 AM393_RS14925 334d630b8e27d030fb8c67ca55130ce0 461 SUPERFAMILY SSF52540 72 454 5.05E-90 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS14925 334d630b8e27d030fb8c67ca55130ce0 461 Gene3D G3DSA:3.40.50.300 187 459 8.7E-55 T 28-03-2018 AM393_RS03905 9604d96007c9b35e3247f25458853891 243 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 20 241 1.0E-79 T 28-03-2018 IPR003730 Multi-copper polyphenol oxidoreductase AM393_RS03905 9604d96007c9b35e3247f25458853891 243 Gene3D G3DSA:3.60.140.10 1 243 1.4E-94 T 28-03-2018 AM393_RS03905 9604d96007c9b35e3247f25458853891 243 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 25 242 1.0E-74 T 28-03-2018 IPR003730 Multi-copper polyphenol oxidoreductase AM393_RS03905 9604d96007c9b35e3247f25458853891 243 SUPERFAMILY SSF64438 3 242 8.42E-88 T 28-03-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic AM393_RS07300 291ee5dc494ecd1cea8b4bf5bc997e9f 523 Pfam PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus 119 521 5.2E-146 T 28-03-2018 IPR007392 D-galactarate/Altronate dehydratase, C-terminal GO:0016829 AM393_RS07300 291ee5dc494ecd1cea8b4bf5bc997e9f 523 SMART SM00858 22 92 1.5E-12 T 28-03-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 AM393_RS07300 291ee5dc494ecd1cea8b4bf5bc997e9f 523 Pfam PF08666 SAF domain 22 91 6.2E-13 T 28-03-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 AM393_RS07300 291ee5dc494ecd1cea8b4bf5bc997e9f 523 Hamap MF_02031 Galactarate dehydratase (L-threo-forming) [garD]. 2 523 78.797 T 28-03-2018 IPR032893 Galactarate dehydratase (L-threo-forming) GarD, Enterobacteriaceae GO:0008867|GO:0046392 KEGG: 00053+4.2.1.42|MetaCyc: PWY-6497 AM393_RS07300 291ee5dc494ecd1cea8b4bf5bc997e9f 523 TIGRFAM TIGR03248 galactar-dH20: galactarate dehydratase 15 523 2.3E-282 T 28-03-2018 IPR017654 Galactarate dehydratase GarD-like GO:0008867|GO:0046392 KEGG: 00053+4.2.1.42|MetaCyc: PWY-6497 AM393_RS25695 66bc7bbb2c3d4cf3746531dcc49a96a3 323 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS25695 66bc7bbb2c3d4cf3746531dcc49a96a3 323 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 234 319 4.1E-29 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AM393_RS25695 66bc7bbb2c3d4cf3746531dcc49a96a3 323 SMART SM00382 42 241 1.3E-10 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS25695 66bc7bbb2c3d4cf3746531dcc49a96a3 323 Gene3D G3DSA:3.40.50.300 3 323 6.4E-82 T 28-03-2018 AM393_RS25695 66bc7bbb2c3d4cf3746531dcc49a96a3 323 SUPERFAMILY SSF52540 7 256 5.11E-68 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS25695 66bc7bbb2c3d4cf3746531dcc49a96a3 323 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 236 300 9.7E-20 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AM393_RS25695 66bc7bbb2c3d4cf3746531dcc49a96a3 323 Pfam PF00005 ABC transporter 34 184 8.5E-28 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS24920 2a0436b694c3b70bddd926485d346f52 191 Gene3D G3DSA:1.10.357.10 44 190 4.6E-11 T 28-03-2018 AM393_RS24920 2a0436b694c3b70bddd926485d346f52 191 SUPERFAMILY SSF48498 79 176 2.42E-16 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AM393_RS24920 2a0436b694c3b70bddd926485d346f52 191 Gene3D G3DSA:1.10.10.60 4 43 1.7E-14 T 28-03-2018 AM393_RS24920 2a0436b694c3b70bddd926485d346f52 191 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 55 1.4E-11 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM393_RS24920 2a0436b694c3b70bddd926485d346f52 191 Pfam PF13977 BetI-type transcriptional repressor, C-terminal 98 188 1.3E-6 T 28-03-2018 AM393_RS24920 2a0436b694c3b70bddd926485d346f52 191 SUPERFAMILY SSF46689 4 70 1.8E-14 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS15645 7ae75acf108ff6d83f0ae9019045816f 286 Gene3D G3DSA:3.20.20.190 15 286 4.5E-50 T 28-03-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 AM393_RS15645 7ae75acf108ff6d83f0ae9019045816f 286 SUPERFAMILY SSF51695 20 284 2.62E-53 T 28-03-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 AM393_RS15645 7ae75acf108ff6d83f0ae9019045816f 286 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 25 280 2.3E-21 T 28-03-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 AM393_RS21290 b1663add222345832ef794a5ace072b2 459 Gene3D G3DSA:1.20.1250.20 12 219 1.4E-30 T 28-03-2018 AM393_RS21290 b1663add222345832ef794a5ace072b2 459 Gene3D G3DSA:1.20.1250.20 250 450 1.8E-18 T 28-03-2018 AM393_RS21290 b1663add222345832ef794a5ace072b2 459 SUPERFAMILY SSF103473 15 449 1.7E-62 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS21290 b1663add222345832ef794a5ace072b2 459 Pfam PF00083 Sugar (and other) transporter 56 450 1.7E-31 T 28-03-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 AM393_RS16705 f5810fbfd61b41df3c9be141cd207f33 397 Pfam PF00529 HlyD membrane-fusion protein of T1SS 43 360 2.2E-7 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AM393_RS16705 f5810fbfd61b41df3c9be141cd207f33 397 Gene3D G3DSA:1.20.1600.10 32 386 3.8E-35 T 28-03-2018 AM393_RS16705 f5810fbfd61b41df3c9be141cd207f33 397 SUPERFAMILY SSF111369 52 300 1.44E-89 T 28-03-2018 AM393_RS16705 f5810fbfd61b41df3c9be141cd207f33 397 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 63 293 5.5E-12 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AM393_RS16705 f5810fbfd61b41df3c9be141cd207f33 397 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 40 375 4.3E-83 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AM393_RS03840 037df434fd3bae5ee13d69cccbac5fdb 361 PIRSF PIRSF006280 1 361 1.2E-166 T 28-03-2018 IPR016479 tRNA/rRNA methyltransferase, YfiF, predicted GO:0008168 AM393_RS03840 037df434fd3bae5ee13d69cccbac5fdb 361 Gene3D G3DSA:3.40.1280.10 202 361 7.0E-38 T 28-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AM393_RS03840 037df434fd3bae5ee13d69cccbac5fdb 361 SUPERFAMILY SSF75217 205 359 1.57E-38 T 28-03-2018 IPR029028 Alpha/beta knot methyltransferases AM393_RS03840 037df434fd3bae5ee13d69cccbac5fdb 361 SMART SM00967 125 200 4.2E-9 T 28-03-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 AM393_RS03840 037df434fd3bae5ee13d69cccbac5fdb 361 Pfam PF00588 SpoU rRNA Methylase family 215 352 2.5E-32 T 28-03-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AM393_RS03840 037df434fd3bae5ee13d69cccbac5fdb 361 Gene3D G3DSA:3.30.1330.30 113 195 5.4E-9 T 28-03-2018 IPR029064 50S ribosomal protein L30e-like AM393_RS03840 037df434fd3bae5ee13d69cccbac5fdb 361 SUPERFAMILY SSF55315 119 195 4.47E-10 T 28-03-2018 IPR029064 50S ribosomal protein L30e-like AM393_RS03840 037df434fd3bae5ee13d69cccbac5fdb 361 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 126 196 9.2E-13 T 28-03-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 AM393_RS22200 8f826c4b6ddbef0e31149b6a389daa03 667 Pfam PF01464 Transglycosylase SLT domain 504 601 8.3E-23 T 28-03-2018 IPR008258 Transglycosylase SLT domain 1 AM393_RS22200 8f826c4b6ddbef0e31149b6a389daa03 667 SUPERFAMILY SSF53955 487 620 1.69E-36 T 28-03-2018 IPR023346 Lysozyme-like domain AM393_RS22200 8f826c4b6ddbef0e31149b6a389daa03 667 Gene3D G3DSA:1.20.5.1230 4 474 7.7E-4 T 28-03-2018 AM393_RS22200 8f826c4b6ddbef0e31149b6a389daa03 667 Gene3D G3DSA:1.10.530.10 475 622 6.0E-37 T 28-03-2018 AM393_RS05800 7dc861ea4d6c49a9fbedee80aa2303e2 339 PRINTS PR00069 Aldo-keto reductase signature 47 71 6.9E-9 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM393_RS05800 7dc861ea4d6c49a9fbedee80aa2303e2 339 PRINTS PR00069 Aldo-keto reductase signature 144 161 6.9E-9 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM393_RS05800 7dc861ea4d6c49a9fbedee80aa2303e2 339 PRINTS PR00069 Aldo-keto reductase signature 113 131 6.9E-9 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM393_RS05800 7dc861ea4d6c49a9fbedee80aa2303e2 339 Pfam PF00248 Aldo/keto reductase family 15 313 2.7E-65 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM393_RS05800 7dc861ea4d6c49a9fbedee80aa2303e2 339 SUPERFAMILY SSF51430 1 317 1.18E-88 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM393_RS05800 7dc861ea4d6c49a9fbedee80aa2303e2 339 Gene3D G3DSA:3.20.20.100 1 320 4.3E-87 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM393_RS02150 e81a5255c014eba7657d82eb35a01026 238 Gene3D G3DSA:3.40.50.620 38 174 2.2E-18 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM393_RS02150 e81a5255c014eba7657d82eb35a01026 238 PIRSF PIRSF005011 1 238 2.1E-154 T 28-03-2018 IPR023604 Uncharacterised protein family SanA AM393_RS02150 e81a5255c014eba7657d82eb35a01026 238 Pfam PF02698 DUF218 domain 48 181 3.1E-17 T 28-03-2018 IPR003848 Domain of unknown function DUF218 AM393_RS08300 5aeae9e3ab06271f97647e6cf172c357 110 Gene3D G3DSA:3.90.470.10 1 110 2.4E-43 T 28-03-2018 AM393_RS08300 5aeae9e3ab06271f97647e6cf172c357 110 Pfam PF00237 Ribosomal protein L22p/L17e 5 107 9.2E-38 T 28-03-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 AM393_RS08300 5aeae9e3ab06271f97647e6cf172c357 110 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 28-03-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM393_RS08300 5aeae9e3ab06271f97647e6cf172c357 110 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 110 29.012 T 28-03-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS08300 5aeae9e3ab06271f97647e6cf172c357 110 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 5.0E-51 T 28-03-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS08300 5aeae9e3ab06271f97647e6cf172c357 110 SUPERFAMILY SSF54843 1 109 6.28E-43 T 28-03-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 AM393_RS29130 d8e137c6d4b76fe7d06a315a344a6479 342 Pfam PF07751 Abi-like protein 10 218 2.0E-9 T 28-03-2018 IPR011664 Abortive infection system protein AbiD/AbiF-like AM393_RS19040 7838ddc903c7ecce566d4e14272983fc 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 216 3.7E-20 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM393_RS19040 7838ddc903c7ecce566d4e14272983fc 223 SMART SM00448 1 112 1.5E-35 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM393_RS19040 7838ddc903c7ecce566d4e14272983fc 223 Pfam PF00072 Response regulator receiver domain 3 113 2.0E-24 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM393_RS19040 7838ddc903c7ecce566d4e14272983fc 223 Gene3D G3DSA:3.40.50.2300 1 121 6.2E-32 T 28-03-2018 AM393_RS19040 7838ddc903c7ecce566d4e14272983fc 223 Gene3D G3DSA:1.10.10.10 122 221 6.3E-27 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS19040 7838ddc903c7ecce566d4e14272983fc 223 SMART SM00862 145 216 1.6E-21 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM393_RS19040 7838ddc903c7ecce566d4e14272983fc 223 SUPERFAMILY SSF52172 1 134 7.4E-36 T 28-03-2018 IPR011006 CheY-like superfamily AM393_RS19040 7838ddc903c7ecce566d4e14272983fc 223 SUPERFAMILY SSF46894 118 217 2.38E-26 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM393_RS21010 99ab217d5ab0dc6df125e11e7228fa41 397 SUPERFAMILY SSF51735 164 349 7.12E-59 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS21010 99ab217d5ab0dc6df125e11e7228fa41 397 SUPERFAMILY SSF50129 1 196 1.0E-58 T 28-03-2018 IPR011032 GroES-like AM393_RS21010 99ab217d5ab0dc6df125e11e7228fa41 397 Gene3D G3DSA:3.40.50.720 187 342 2.9E-26 T 28-03-2018 AM393_RS21010 99ab217d5ab0dc6df125e11e7228fa41 397 Gene3D G3DSA:3.90.180.10 1 186 1.4E-53 T 28-03-2018 AM393_RS21010 99ab217d5ab0dc6df125e11e7228fa41 397 Pfam PF13823 Alcohol dehydrogenase GroES-associated 1 23 4.5E-11 T 28-03-2018 IPR027399 Alcohol dehydrogenase GroES-associated AM393_RS21010 99ab217d5ab0dc6df125e11e7228fa41 397 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 150 6.5E-29 T 28-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AM393_RS21010 99ab217d5ab0dc6df125e11e7228fa41 397 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 59 73 - T 28-03-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 AM393_RS24240 10b7977dbdc51a3ef2f2aa3eaf0cb350 366 SMART SM01236 195 300 1.5E-32 T 28-03-2018 AM393_RS24240 10b7977dbdc51a3ef2f2aa3eaf0cb350 366 Gene3D G3DSA:1.20.910.10 125 362 1.4E-37 T 28-03-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 AM393_RS24240 10b7977dbdc51a3ef2f2aa3eaf0cb350 366 SUPERFAMILY SSF48613 132 346 6.56E-25 T 28-03-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 AM393_RS24240 10b7977dbdc51a3ef2f2aa3eaf0cb350 366 Pfam PF14518 Iron-containing redox enzyme 165 338 3.8E-36 T 28-03-2018 IPR028201 PqqC-like protein AM393_RS09245 bd9775975b336eda97fe1222ffe3da89 179 Pfam PF17037 Cellulose biosynthesis protein BcsO 1 179 1.6E-9 T 28-03-2018 IPR031484 Cellulose biosynthesis protein BcsO AM393_RS15990 5b7bbb0fc05e6e0090f8213d3b45b06e 299 Gene3D G3DSA:1.10.3470.10 3 286 3.6E-50 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AM393_RS15990 5b7bbb0fc05e6e0090f8213d3b45b06e 299 Pfam PF02653 Branched-chain amino acid transport system / permease component 10 281 5.3E-47 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AM393_RS00540 0cb9eb6a9b608054349f33165b1ef2aa 296 Pfam PF04393 Protein of unknown function (DUF535) 10 287 1.5E-99 T 28-03-2018 IPR007488 Protein of unknown function DUF535 AM393_RS00540 0cb9eb6a9b608054349f33165b1ef2aa 296 Gene3D G3DSA:3.40.50.1820 3 173 2.0E-4 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AM393_RS24595 0603ca432481cf95901517e3f919e634 226 PRINTS PR01837 MgtC/SapB protein signature 12 31 1.9E-46 T 28-03-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 AM393_RS24595 0603ca432481cf95901517e3f919e634 226 PRINTS PR01837 MgtC/SapB protein signature 31 49 1.9E-46 T 28-03-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 AM393_RS24595 0603ca432481cf95901517e3f919e634 226 PRINTS PR01837 MgtC/SapB protein signature 83 107 1.9E-46 T 28-03-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 AM393_RS24595 0603ca432481cf95901517e3f919e634 226 PRINTS PR01837 MgtC/SapB protein signature 56 78 1.9E-46 T 28-03-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 AM393_RS24595 0603ca432481cf95901517e3f919e634 226 Pfam PF02308 MgtC family 9 128 2.5E-38 T 28-03-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 AM393_RS09325 d09e64ad1551b6b23dec803c4b9df886 146 Gene3D G3DSA:3.40.630.30 1 143 9.9E-21 T 28-03-2018 AM393_RS09325 d09e64ad1551b6b23dec803c4b9df886 146 SUPERFAMILY SSF55729 1 141 1.05E-24 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM393_RS09325 d09e64ad1551b6b23dec803c4b9df886 146 Pfam PF13673 Acetyltransferase (GNAT) domain 47 121 4.9E-14 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AM393_RS01020 d6c81ad959c2e6e67f2ea23362031c6f 305 SUPERFAMILY SSF53850 89 294 5.43E-29 T 28-03-2018 AM393_RS01020 d6c81ad959c2e6e67f2ea23362031c6f 305 Gene3D G3DSA:1.10.10.10 1 83 2.9E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS01020 d6c81ad959c2e6e67f2ea23362031c6f 305 Gene3D G3DSA:3.40.190.10 88 176 4.4E-13 T 28-03-2018 AM393_RS01020 d6c81ad959c2e6e67f2ea23362031c6f 305 Pfam PF03466 LysR substrate binding domain 87 289 3.7E-31 T 28-03-2018 IPR005119 LysR, substrate-binding AM393_RS01020 d6c81ad959c2e6e67f2ea23362031c6f 305 SUPERFAMILY SSF46785 1 86 7.72E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS01020 d6c81ad959c2e6e67f2ea23362031c6f 305 Gene3D G3DSA:3.40.190.10 177 263 2.2E-9 T 28-03-2018 AM393_RS01020 d6c81ad959c2e6e67f2ea23362031c6f 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 3.0E-21 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS01020 d6c81ad959c2e6e67f2ea23362031c6f 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.2E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS01020 d6c81ad959c2e6e67f2ea23362031c6f 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.2E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS01020 d6c81ad959c2e6e67f2ea23362031c6f 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.2E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS13620 c927df16e81e023113ccb63353078cca 144 Pfam PF12680 SnoaL-like domain 13 111 4.4E-17 T 28-03-2018 IPR009959 Polyketide cyclase SnoaL-like domain AM393_RS13620 c927df16e81e023113ccb63353078cca 144 SUPERFAMILY SSF54427 8 130 2.93E-25 T 28-03-2018 IPR032710 NTF2-like domain AM393_RS13620 c927df16e81e023113ccb63353078cca 144 Gene3D G3DSA:3.10.450.50 2 126 1.9E-24 T 28-03-2018 AM393_RS17500 bba660ef18d0b97261191709571e62f0 151 Pfam PF11776 Nickel/cobalt transporter regulator 92 142 4.9E-21 T 28-03-2018 IPR024572 Nickel/cobalt homeostasis protein RcnB AM393_RS17500 bba660ef18d0b97261191709571e62f0 151 ProDom PD456999 SIGNAL PRECURSOR TRANSMEMBRANE MEMBRANE YOHN INTEGRAL EXPORTED SIMILAR LIPOPROTEIN LIPOPROTEIN 89 143 1.0E-9 T 28-03-2018 IPR024572 Nickel/cobalt homeostasis protein RcnB AM393_RS17500 bba660ef18d0b97261191709571e62f0 151 Gene3D G3DSA:3.10.450.160 22 147 1.9E-20 T 28-03-2018 AM393_RS02700 9f79ab075a54663350ed7e28946b6edd 148 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 28 125 2.1E-31 T 28-03-2018 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM393_RS02700 9f79ab075a54663350ed7e28946b6edd 148 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 9 126 19.994 T 28-03-2018 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 AM393_RS12935 4d776f2becc435db4210658806b3f9df 75 TIGRFAM TIGR00165 S18: ribosomal protein bS18 4 72 8.1E-38 T 28-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS12935 4d776f2becc435db4210658806b3f9df 75 SUPERFAMILY SSF46911 3 74 7.06E-29 T 28-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS12935 4d776f2becc435db4210658806b3f9df 75 PRINTS PR00974 Ribosomal protein S18 family signature 38 45 1.3E-18 T 28-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS12935 4d776f2becc435db4210658806b3f9df 75 PRINTS PR00974 Ribosomal protein S18 family signature 46 60 1.3E-18 T 28-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS12935 4d776f2becc435db4210658806b3f9df 75 PRINTS PR00974 Ribosomal protein S18 family signature 28 38 1.3E-18 T 28-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS12935 4d776f2becc435db4210658806b3f9df 75 PRINTS PR00974 Ribosomal protein S18 family signature 60 70 1.3E-18 T 28-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS12935 4d776f2becc435db4210658806b3f9df 75 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 21 71 3.0E-22 T 28-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS12935 4d776f2becc435db4210658806b3f9df 75 Pfam PF01084 Ribosomal protein S18 19 68 9.1E-25 T 28-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS12935 4d776f2becc435db4210658806b3f9df 75 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 2 73 21.313 T 28-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS12935 4d776f2becc435db4210658806b3f9df 75 Gene3D G3DSA:4.10.640.10 1 75 1.5E-31 T 28-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS12935 4d776f2becc435db4210658806b3f9df 75 ProSitePatterns PS00057 Ribosomal protein S18 signature. 21 44 - T 28-03-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS28840 98cfeeb2df4976cc29329d488f174381 337 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 17 98 2.1E-24 T 28-03-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 AM393_RS28840 98cfeeb2df4976cc29329d488f174381 337 Gene3D G3DSA:1.10.443.10 112 318 2.9E-46 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM393_RS28840 98cfeeb2df4976cc29329d488f174381 337 Pfam PF00589 Phage integrase family 116 317 4.3E-64 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM393_RS28840 98cfeeb2df4976cc29329d488f174381 337 SUPERFAMILY SSF56349 16 316 1.41E-50 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AM393_RS28840 98cfeeb2df4976cc29329d488f174381 337 TIGRFAM TIGR02249 integrase_gron: integron integrase 16 330 1.8E-153 T 28-03-2018 IPR011946 Integrase, integron-type GO:0003677|GO:0006310|GO:0015074 AM393_RS28840 98cfeeb2df4976cc29329d488f174381 337 Gene3D G3DSA:1.10.150.130 13 97 4.1E-11 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal AM393_RS00335 cc8dbb968d503895626e794d41679a2a 270 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 2 268 1.3E-111 T 28-03-2018 IPR010223 ATP binding protein MinD, bacterial-type GO:0016887 AM393_RS00335 cc8dbb968d503895626e794d41679a2a 270 SUPERFAMILY SSF52540 1 268 3.21E-54 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS00335 cc8dbb968d503895626e794d41679a2a 270 Gene3D G3DSA:3.40.50.300 1 260 2.6E-56 T 28-03-2018 AM393_RS00335 cc8dbb968d503895626e794d41679a2a 270 PIRSF PIRSF003092 1 270 3.2E-100 T 28-03-2018 IPR025501 ATP binding protein MinD AM393_RS00335 cc8dbb968d503895626e794d41679a2a 270 Pfam PF13614 AAA domain 3 159 1.8E-21 T 28-03-2018 IPR025669 AAA domain AM393_RS10575 85a8cfa25d4c4b473c8cf9555c0f227a 622 Hamap MF_01522 Low affinity potassium transport system protein kup [kup]. 5 622 33.569 T 28-03-2018 IPR023051 Potassium uptake protein, low affinity, Kup AM393_RS10575 85a8cfa25d4c4b473c8cf9555c0f227a 622 Pfam PF02705 K+ potassium transporter 14 544 1.3E-208 T 28-03-2018 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 AM393_RS10575 85a8cfa25d4c4b473c8cf9555c0f227a 622 TIGRFAM TIGR00794 kup: potassium uptake protein 97 551 4.2E-195 T 28-03-2018 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 AM393_RS03215 04c2e61f16ba52d9dff9974faef929c1 299 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 2 275 58.572 T 28-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AM393_RS03215 04c2e61f16ba52d9dff9974faef929c1 299 Gene3D G3DSA:3.40.1500.10 1 299 9.9E-141 T 28-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AM393_RS03215 04c2e61f16ba52d9dff9974faef929c1 299 SUPERFAMILY SSF102886 3 298 2.22E-138 T 28-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AM393_RS03215 04c2e61f16ba52d9dff9974faef929c1 299 PIRSF PIRSF000166 1 299 3.4E-128 T 28-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AM393_RS03215 04c2e61f16ba52d9dff9974faef929c1 299 PRINTS PR00073 Coprogen oxidase signature 123 145 7.6E-90 T 28-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AM393_RS03215 04c2e61f16ba52d9dff9974faef929c1 299 PRINTS PR00073 Coprogen oxidase signature 46 67 7.6E-90 T 28-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AM393_RS03215 04c2e61f16ba52d9dff9974faef929c1 299 PRINTS PR00073 Coprogen oxidase signature 88 112 7.6E-90 T 28-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AM393_RS03215 04c2e61f16ba52d9dff9974faef929c1 299 PRINTS PR00073 Coprogen oxidase signature 29 45 7.6E-90 T 28-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AM393_RS03215 04c2e61f16ba52d9dff9974faef929c1 299 PRINTS PR00073 Coprogen oxidase signature 160 189 7.6E-90 T 28-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AM393_RS03215 04c2e61f16ba52d9dff9974faef929c1 299 PRINTS PR00073 Coprogen oxidase signature 260 286 7.6E-90 T 28-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AM393_RS03215 04c2e61f16ba52d9dff9974faef929c1 299 PRINTS PR00073 Coprogen oxidase signature 232 259 7.6E-90 T 28-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AM393_RS03215 04c2e61f16ba52d9dff9974faef929c1 299 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 164 188 - T 28-03-2018 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AM393_RS03215 04c2e61f16ba52d9dff9974faef929c1 299 Pfam PF01218 Coproporphyrinogen III oxidase 7 299 4.1E-133 T 28-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AM393_RS03350 e3b8a952c57d7e8b606a918bee712035 375 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 3 375 52.43 T 28-03-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 AM393_RS03350 e3b8a952c57d7e8b606a918bee712035 375 Pfam PF07687 Peptidase dimerisation domain 175 280 4.0E-23 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain AM393_RS03350 e3b8a952c57d7e8b606a918bee712035 375 Pfam PF01546 Peptidase family M20/M25/M40 62 371 2.1E-43 T 28-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 AM393_RS03350 e3b8a952c57d7e8b606a918bee712035 375 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 6 373 6.2E-174 T 28-03-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 AM393_RS03350 e3b8a952c57d7e8b606a918bee712035 375 SUPERFAMILY SSF53187 292 373 9.95E-64 T 28-03-2018 AM393_RS03350 e3b8a952c57d7e8b606a918bee712035 375 SUPERFAMILY SSF53187 5 178 9.95E-64 T 28-03-2018 AM393_RS03350 e3b8a952c57d7e8b606a918bee712035 375 Gene3D G3DSA:3.40.630.10 1 280 4.4E-61 T 28-03-2018 AM393_RS03350 e3b8a952c57d7e8b606a918bee712035 375 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 97 136 - T 28-03-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 AM393_RS03350 e3b8a952c57d7e8b606a918bee712035 375 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 61 70 - T 28-03-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 AM393_RS03350 e3b8a952c57d7e8b606a918bee712035 375 SUPERFAMILY SSF55031 179 287 8.97E-29 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain AM393_RS03350 e3b8a952c57d7e8b606a918bee712035 375 Gene3D G3DSA:3.40.630.10 295 373 1.4E-5 T 28-03-2018 AM393_RS17915 c43754a2d593058fe4d30e0ba09b308c 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 92 103 7.3E-11 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS17915 c43754a2d593058fe4d30e0ba09b308c 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 153 7.3E-11 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS17915 c43754a2d593058fe4d30e0ba09b308c 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 167 186 7.3E-11 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS17915 c43754a2d593058fe4d30e0ba09b308c 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 188 205 2.6E-42 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS17915 c43754a2d593058fe4d30e0ba09b308c 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 139 155 2.6E-42 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS17915 c43754a2d593058fe4d30e0ba09b308c 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 186 2.6E-42 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS17915 c43754a2d593058fe4d30e0ba09b308c 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 92 103 2.6E-42 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS17915 c43754a2d593058fe4d30e0ba09b308c 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 222 242 2.6E-42 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS17915 c43754a2d593058fe4d30e0ba09b308c 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 17 34 2.6E-42 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS17915 c43754a2d593058fe4d30e0ba09b308c 261 SUPERFAMILY SSF51735 15 259 6.62E-79 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS17915 c43754a2d593058fe4d30e0ba09b308c 261 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 154 182 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM393_RS17915 c43754a2d593058fe4d30e0ba09b308c 261 Gene3D G3DSA:3.40.50.720 51 260 5.2E-60 T 28-03-2018 AM393_RS17915 c43754a2d593058fe4d30e0ba09b308c 261 Gene3D G3DSA:3.40.50.720 8 50 8.3E-9 T 28-03-2018 AM393_RS17915 c43754a2d593058fe4d30e0ba09b308c 261 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 22 258 2.3E-67 T 28-03-2018 AM393_RS11455 e8d9d1cea42e88891589c5cdb9a8fccc 286 SUPERFAMILY SSF56931 37 285 7.85E-92 T 28-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 AM393_RS11455 e8d9d1cea42e88891589c5cdb9a8fccc 286 Gene3D G3DSA:2.40.230.10 30 286 1.5E-95 T 28-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 AM393_RS11455 e8d9d1cea42e88891589c5cdb9a8fccc 286 Pfam PF02253 Phospholipase A1 41 282 6.1E-89 T 28-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 AM393_RS11455 e8d9d1cea42e88891589c5cdb9a8fccc 286 PRINTS PR01486 Bacterial phospholipase A1 protein signature 153 167 2.6E-87 T 28-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 AM393_RS11455 e8d9d1cea42e88891589c5cdb9a8fccc 286 PRINTS PR01486 Bacterial phospholipase A1 protein signature 123 142 2.6E-87 T 28-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 AM393_RS11455 e8d9d1cea42e88891589c5cdb9a8fccc 286 PRINTS PR01486 Bacterial phospholipase A1 protein signature 233 250 2.6E-87 T 28-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 AM393_RS11455 e8d9d1cea42e88891589c5cdb9a8fccc 286 PRINTS PR01486 Bacterial phospholipase A1 protein signature 100 116 2.6E-87 T 28-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 AM393_RS11455 e8d9d1cea42e88891589c5cdb9a8fccc 286 PRINTS PR01486 Bacterial phospholipase A1 protein signature 200 218 2.6E-87 T 28-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 AM393_RS11455 e8d9d1cea42e88891589c5cdb9a8fccc 286 PRINTS PR01486 Bacterial phospholipase A1 protein signature 168 186 2.6E-87 T 28-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 AM393_RS11455 e8d9d1cea42e88891589c5cdb9a8fccc 286 PRINTS PR01486 Bacterial phospholipase A1 protein signature 255 275 2.6E-87 T 28-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 AM393_RS11455 e8d9d1cea42e88891589c5cdb9a8fccc 286 PRINTS PR01486 Bacterial phospholipase A1 protein signature 78 95 2.6E-87 T 28-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 AM393_RS10825 888991a18e8dd3b318e7238e4538a78b 145 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 7 145 4.8E-28 T 28-03-2018 IPR002178 PTS EIIA type-2 domain AM393_RS10825 888991a18e8dd3b318e7238e4538a78b 145 Gene3D G3DSA:3.40.930.10 2 145 8.1E-30 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 AM393_RS10825 888991a18e8dd3b318e7238e4538a78b 145 SUPERFAMILY SSF55804 7 145 2.09E-29 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 AM393_RS10245 7fd7869a829622d9dbf22df15c06cb8a 442 Hamap MF_01030 D-serine dehydratase [dsdA]. 1 442 275.745 T 28-03-2018 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 AM393_RS10245 7fd7869a829622d9dbf22df15c06cb8a 442 Gene3D G3DSA:3.40.50.1100 252 441 1.2E-28 T 28-03-2018 AM393_RS10245 7fd7869a829622d9dbf22df15c06cb8a 442 TIGRFAM TIGR02035 D_Ser_am_lyase: D-serine ammonia-lyase 11 438 3.1E-233 T 28-03-2018 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 AM393_RS10245 7fd7869a829622d9dbf22df15c06cb8a 442 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 108 122 - T 28-03-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 AM393_RS10245 7fd7869a829622d9dbf22df15c06cb8a 442 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 78 399 1.4E-64 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AM393_RS10245 7fd7869a829622d9dbf22df15c06cb8a 442 Gene3D G3DSA:3.40.50.1100 76 251 6.6E-26 T 28-03-2018 AM393_RS10245 7fd7869a829622d9dbf22df15c06cb8a 442 SUPERFAMILY SSF53686 98 437 3.7E-53 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AM393_RS03210 c4e0e35bfcbd34b3aa486027a10a74ad 290 SUPERFAMILY SSF53187 58 153 1.79E-54 T 28-03-2018 AM393_RS03210 c4e0e35bfcbd34b3aa486027a10a74ad 290 SUPERFAMILY SSF53187 201 278 1.79E-54 T 28-03-2018 AM393_RS03210 c4e0e35bfcbd34b3aa486027a10a74ad 290 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 60 274 3.8E-52 T 28-03-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 AM393_RS03210 c4e0e35bfcbd34b3aa486027a10a74ad 290 SMART SM00646 119 274 7.0E-67 T 28-03-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 AM393_RS03210 c4e0e35bfcbd34b3aa486027a10a74ad 290 Gene3D G3DSA:3.40.630.40 55 281 3.6E-57 T 28-03-2018 AM393_RS27505 d7555a9f7e839d7d0ce71e50edc623a2 108 Pfam PF12840 Helix-turn-helix domain 8 69 1.6E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS27505 d7555a9f7e839d7d0ce71e50edc623a2 108 Gene3D G3DSA:1.10.10.10 2 97 1.9E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS27505 d7555a9f7e839d7d0ce71e50edc623a2 108 SUPERFAMILY SSF46785 3 93 4.85E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS27505 d7555a9f7e839d7d0ce71e50edc623a2 108 SMART SM00418 8 89 5.8E-5 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM393_RS18060 c11f2a066493b971cd4d14b877c11fc0 134 Gene3D G3DSA:1.10.260.40 88 134 2.3E-14 T 28-03-2018 AM393_RS18060 c11f2a066493b971cd4d14b877c11fc0 134 SMART SM00530 70 126 4.8E-6 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM393_RS18060 c11f2a066493b971cd4d14b877c11fc0 134 SUPERFAMILY SSF47413 74 126 6.48E-11 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM393_RS18060 c11f2a066493b971cd4d14b877c11fc0 134 Pfam PF01381 Helix-turn-helix 74 122 2.9E-11 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM393_RS18060 c11f2a066493b971cd4d14b877c11fc0 134 Gene3D G3DSA:1.10.10.60 36 87 3.7E-9 T 28-03-2018 AM393_RS19300 40080fa3d325a4c9abce09fab58f9995 421 Gene3D G3DSA:2.60.120.330 1 421 2.3E-129 T 28-03-2018 IPR027443 Isopenicillin N synthase-like AM393_RS19300 40080fa3d325a4c9abce09fab58f9995 421 Pfam PF07350 Protein of unknown function (DUF1479) 16 419 2.3E-142 T 28-03-2018 IPR010856 Protein of unknown function DUF1479 AM393_RS19300 40080fa3d325a4c9abce09fab58f9995 421 SUPERFAMILY SSF51197 5 419 4.94E-153 T 28-03-2018 AM393_RS24255 46c99ba84f8405a35894f7ac880c95d3 535 Gene3D G3DSA:3.50.50.60 2 528 5.1E-14 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS24255 46c99ba84f8405a35894f7ac880c95d3 535 Pfam PF13454 FAD-NAD(P)-binding 5 164 3.9E-28 T 28-03-2018 AM393_RS24255 46c99ba84f8405a35894f7ac880c95d3 535 SUPERFAMILY SSF51905 1 258 1.17E-11 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS00630 c6eadd9bcc127990629c0ae19bdfca48 603 Pfam PF00920 Dehydratase family 66 598 3.4E-157 T 28-03-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AM393_RS00630 c6eadd9bcc127990629c0ae19bdfca48 603 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 505 516 - T 28-03-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AM393_RS00630 c6eadd9bcc127990629c0ae19bdfca48 603 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 154 164 - T 28-03-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AM393_RS00630 c6eadd9bcc127990629c0ae19bdfca48 603 SUPERFAMILY SSF143975 1 418 3.14E-144 T 28-03-2018 AM393_RS00630 c6eadd9bcc127990629c0ae19bdfca48 603 TIGRFAM TIGR01196 edd: phosphogluconate dehydratase 3 602 0.0 T 28-03-2018 IPR004786 6-phosphogluconate dehydratase GO:0004456|GO:0009255 KEGG: 00030+4.2.1.12 AM393_RS00630 c6eadd9bcc127990629c0ae19bdfca48 603 SUPERFAMILY SSF52016 419 600 1.33E-57 T 28-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AM393_RS24720 a61e69e6266a66080923ceb9945544fb 168 SUPERFAMILY SSF47240 5 155 7.04E-39 T 28-03-2018 IPR009078 Ferritin-like superfamily AM393_RS24720 a61e69e6266a66080923ceb9945544fb 168 Pfam PF05974 Domain of unknown function (DUF892) 5 156 4.3E-42 T 28-03-2018 IPR010287 Domain of unknown function DUF892 AM393_RS24720 a61e69e6266a66080923ceb9945544fb 168 Gene3D G3DSA:1.20.1260.10 1 168 3.5E-25 T 28-03-2018 IPR012347 Ferritin-related AM393_RS06600 87008ae69944248cc74d76f734933354 97 Pfam PF08681 Protein of unknown function (DUF1778) 14 88 3.6E-25 T 28-03-2018 IPR014795 Vibrio phage ICP1, Orf50 AM393_RS06600 87008ae69944248cc74d76f734933354 97 SUPERFAMILY SSF47598 10 87 3.63E-20 T 28-03-2018 IPR010985 Ribbon-helix-helix GO:0006355 AM393_RS06600 87008ae69944248cc74d76f734933354 97 Gene3D G3DSA:1.20.5.780 10 89 3.3E-26 T 28-03-2018 AM393_RS07640 441ad7c4788bcca7bef3c728d826c07d 270 Gene3D G3DSA:3.40.50.300 5 249 2.3E-60 T 28-03-2018 AM393_RS07640 441ad7c4788bcca7bef3c728d826c07d 270 SMART SM00382 33 229 1.8E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS07640 441ad7c4788bcca7bef3c728d826c07d 270 Pfam PF00005 ABC transporter 25 172 4.2E-28 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS07640 441ad7c4788bcca7bef3c728d826c07d 270 SUPERFAMILY SSF52540 8 236 1.47E-62 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS07640 441ad7c4788bcca7bef3c728d826c07d 270 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS00385 f4fbad866955850ee3e4a99f4fb484d0 192 SUPERFAMILY SSF55811 8 181 1.26E-34 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 AM393_RS00385 f4fbad866955850ee3e4a99f4fb484d0 192 ProSitePatterns PS01293 Nudix CoA signature. 47 67 - T 28-03-2018 IPR000059 NUDIX hydrolase, NudL, conserved site GO:0000287|GO:0009132|GO:0016818|GO:0030145 Reactome: R-HSA-390918 AM393_RS00385 f4fbad866955850ee3e4a99f4fb484d0 192 Hamap MF_01592 Uncharacterized Nudix hydrolase NudL [nudL]. 1 190 51.229 T 28-03-2018 IPR023735 Uncharacterised nudix hydrolase NudL GO:0016818 AM393_RS00385 f4fbad866955850ee3e4a99f4fb484d0 192 Gene3D G3DSA:3.90.79.10 7 189 5.5E-41 T 28-03-2018 AM393_RS00385 f4fbad866955850ee3e4a99f4fb484d0 192 Pfam PF00293 NUDIX domain 30 143 7.3E-15 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AM393_RS06345 94b1c8557f93d103987c8b1081957c48 81 SUPERFAMILY SSF47413 8 71 5.07E-13 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM393_RS06345 94b1c8557f93d103987c8b1081957c48 81 Gene3D G3DSA:1.10.260.40 1 79 1.0E-13 T 28-03-2018 AM393_RS06345 94b1c8557f93d103987c8b1081957c48 81 SMART SM00530 15 70 5.2E-6 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM393_RS06345 94b1c8557f93d103987c8b1081957c48 81 Pfam PF12844 Helix-turn-helix domain 14 73 2.1E-9 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM393_RS08490 86a51f81030a28773f12baff287fe810 189 Gene3D G3DSA:2.40.100.10 14 189 7.7E-53 T 28-03-2018 IPR029000 Cyclophilin-like domain AM393_RS08490 86a51f81030a28773f12baff287fe810 189 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 30 187 7.3E-50 T 28-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 AM393_RS08490 86a51f81030a28773f12baff287fe810 189 PIRSF PIRSF001467 11 188 6.6E-27 T 28-03-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 AM393_RS08490 86a51f81030a28773f12baff287fe810 189 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 64 81 - T 28-03-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 AM393_RS08490 86a51f81030a28773f12baff287fe810 189 SUPERFAMILY SSF50891 25 188 3.36E-58 T 28-03-2018 IPR029000 Cyclophilin-like domain AM393_RS08490 86a51f81030a28773f12baff287fe810 189 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 69 81 1.1E-10 T 28-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 AM393_RS08490 86a51f81030a28773f12baff287fe810 189 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 43 58 1.1E-10 T 28-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 AM393_RS08490 86a51f81030a28773f12baff287fe810 189 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 143 158 1.1E-10 T 28-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 AM393_RS18725 d88fd709448184b01c6a7a0e20023898 230 Pfam PF01618 MotA/TolQ/ExbB proton channel family 79 207 5.2E-42 T 28-03-2018 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 AM393_RS18725 d88fd709448184b01c6a7a0e20023898 230 TIGRFAM TIGR02796 tolQ: protein TolQ 5 219 1.2E-93 T 28-03-2018 IPR014163 Tol-Pal system, TolQ GO:0015031|GO:0016021 AM393_RS08545 8c0765df3361ad002c0bc3f63d8cbbeb 364 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 13 352 7.5E-123 T 28-03-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 AM393_RS08545 8c0765df3361ad002c0bc3f63d8cbbeb 364 SUPERFAMILY SSF56796 4 356 2.09E-117 T 28-03-2018 AM393_RS08545 8c0765df3361ad002c0bc3f63d8cbbeb 364 PIRSF PIRSF001455 11 363 7.6E-106 T 28-03-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 AM393_RS08545 8c0765df3361ad002c0bc3f63d8cbbeb 364 Pfam PF01761 3-dehydroquinate synthase 67 325 1.0E-110 T 28-03-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 AM393_RS08545 8c0765df3361ad002c0bc3f63d8cbbeb 364 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 2 358 42.852 T 28-03-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 AM393_RS08545 8c0765df3361ad002c0bc3f63d8cbbeb 364 Gene3D G3DSA:3.40.50.1970 4 172 1.6E-49 T 28-03-2018 AM393_RS08545 8c0765df3361ad002c0bc3f63d8cbbeb 364 Gene3D G3DSA:1.20.1090.10 173 362 2.8E-68 T 28-03-2018 AM393_RS07835 bb0ee7aa19a459c2d1977fe4a80f9359 310 SUPERFAMILY SSF111369 46 216 1.31E-21 T 28-03-2018 AM393_RS07835 bb0ee7aa19a459c2d1977fe4a80f9359 310 Pfam PF13533 Biotin-lipoyl like 48 95 2.1E-19 T 28-03-2018 AM393_RS07835 bb0ee7aa19a459c2d1977fe4a80f9359 310 Gene3D G3DSA:2.40.50.100 46 150 6.9E-13 T 28-03-2018 AM393_RS07835 bb0ee7aa19a459c2d1977fe4a80f9359 310 Hamap MF_01544 p-hydroxybenzoic acid efflux pump subunit AaeA [aaeA]. 1 310 58.08 T 28-03-2018 IPR022871 Para-hydroxybenzoic acid efflux pump, subunit AaeA AM393_RS07835 bb0ee7aa19a459c2d1977fe4a80f9359 310 Pfam PF13437 HlyD family secretion protein 156 238 2.5E-10 T 28-03-2018 AM393_RS07835 bb0ee7aa19a459c2d1977fe4a80f9359 310 Gene3D G3DSA:2.40.50.100 151 250 0.0012 T 28-03-2018 AM393_RS07835 bb0ee7aa19a459c2d1977fe4a80f9359 310 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 46 240 1.2E-32 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AM393_RS08950 234bd906e9c1eda441e16ac1d1156e60 221 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 12 205 1.5E-65 T 28-03-2018 IPR003744 Queuosine precursor transporter AM393_RS08950 234bd906e9c1eda441e16ac1d1156e60 221 Pfam PF02592 Putative vitamin uptake transporter 43 199 4.3E-36 T 28-03-2018 IPR003744 Queuosine precursor transporter AM393_RS02610 7a9a28e635261bb31ba667f5be5b3224 285 Gene3D G3DSA:3.90.226.10 7 224 3.3E-64 T 28-03-2018 AM393_RS02610 7a9a28e635261bb31ba667f5be5b3224 285 Gene3D G3DSA:1.10.12.10 225 273 3.4E-13 T 28-03-2018 IPR014748 Crontonase, C-terminal AM393_RS02610 7a9a28e635261bb31ba667f5be5b3224 285 Hamap MF_01934 1,4-dihydroxy-2-naphthoyl-CoA synthase [menB]. 15 284 55.619 T 28-03-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 AM393_RS02610 7a9a28e635261bb31ba667f5be5b3224 285 TIGRFAM TIGR01929 menB: naphthoate synthase 22 281 5.1E-151 T 28-03-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 AM393_RS02610 7a9a28e635261bb31ba667f5be5b3224 285 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 123 143 - T 28-03-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 AM393_RS02610 7a9a28e635261bb31ba667f5be5b3224 285 Pfam PF00378 Enoyl-CoA hydratase/isomerase 31 279 5.5E-79 T 28-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 AM393_RS02610 7a9a28e635261bb31ba667f5be5b3224 285 SUPERFAMILY SSF52096 16 280 4.7E-79 T 28-03-2018 IPR029045 ClpP/crotonase-like domain AM393_RS09365 7a65efe130f40b452d36a106cb72972f 236 Pfam PF11254 Protein of unknown function (DUF3053) 15 230 2.2E-92 T 28-03-2018 IPR021413 Protein of unknown function DUF3053 AM393_RS04145 23618b2dc84f861dbecf84b7041a175f 205 SMART SM00421 142 199 2.0E-4 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS04145 23618b2dc84f861dbecf84b7041a175f 205 SUPERFAMILY SSF46894 141 201 1.67E-10 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM393_RS04145 23618b2dc84f861dbecf84b7041a175f 205 Pfam PF00196 Bacterial regulatory proteins, luxR family 145 198 4.2E-12 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS04145 23618b2dc84f861dbecf84b7041a175f 205 Gene3D G3DSA:1.10.10.10 16 203 1.7E-8 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS05055 56fc1d4843ecb1625d77831584ad28df 436 TIGRFAM TIGR00885 fucP: L-fucose:H+ symporter permease 22 430 2.9E-193 T 28-03-2018 IPR005275 L-fucose permease FucP GO:0015150|GO:0015756 AM393_RS05055 56fc1d4843ecb1625d77831584ad28df 436 Gene3D G3DSA:1.20.1250.20 16 243 2.4E-24 T 28-03-2018 AM393_RS05055 56fc1d4843ecb1625d77831584ad28df 436 Gene3D G3DSA:1.20.1250.20 244 433 2.5E-20 T 28-03-2018 AM393_RS05055 56fc1d4843ecb1625d77831584ad28df 436 Pfam PF07690 Major Facilitator Superfamily 31 388 2.5E-19 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS05055 56fc1d4843ecb1625d77831584ad28df 436 SUPERFAMILY SSF103473 20 429 2.22E-42 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS20200 d4f0c69c862e889e6b34082ae2c923f1 172 SUPERFAMILY SSF54637 3 169 8.2E-56 T 28-03-2018 IPR029069 HotDog domain AM393_RS20200 d4f0c69c862e889e6b34082ae2c923f1 172 TIGRFAM TIGR01749 fabA: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA 4 172 6.0E-97 T 28-03-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AM393_RS20200 d4f0c69c862e889e6b34082ae2c923f1 172 Pfam PF07977 FabA-like domain 29 158 7.0E-54 T 28-03-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AM393_RS20200 d4f0c69c862e889e6b34082ae2c923f1 172 Gene3D G3DSA:3.10.129.10 1 172 5.8E-50 T 28-03-2018 AM393_RS20200 d4f0c69c862e889e6b34082ae2c923f1 172 Hamap MF_00405 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase [fabA]. 2 172 51.371 T 28-03-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AM393_RS06890 90aacc62e0ff71be783d2415ac2e425c 100 PIRSF PIRSF001223 1 100 5.6E-51 T 28-03-2018 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AM393_RS06890 90aacc62e0ff71be783d2415ac2e425c 100 ProDom PD002319 SUBUNIT GAMMA HYDROLASE UREASE UREA AMIDOHYDROLASE UREASE ALPHA GAMMA/BETA METAL-BINDING 9 99 4.0E-47 T 28-03-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AM393_RS06890 90aacc62e0ff71be783d2415ac2e425c 100 SUPERFAMILY SSF54111 1 99 1.02E-45 T 28-03-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AM393_RS06890 90aacc62e0ff71be783d2415ac2e425c 100 Gene3D G3DSA:3.30.280.10 2 99 1.4E-47 T 28-03-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AM393_RS06890 90aacc62e0ff71be783d2415ac2e425c 100 Hamap MF_00739 Urease subunit gamma [ureA]. 1 100 35.046 T 28-03-2018 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AM393_RS06890 90aacc62e0ff71be783d2415ac2e425c 100 TIGRFAM TIGR00193 urease_gam: urease, gamma subunit 1 99 4.1E-51 T 28-03-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AM393_RS06890 90aacc62e0ff71be783d2415ac2e425c 100 Pfam PF00547 Urease, gamma subunit 1 99 5.9E-47 T 28-03-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AM393_RS04110 42fcbd179ee0c1585dc9b451be6d01e2 267 Gene3D G3DSA:3.40.190.10 8 157 1.2E-22 T 28-03-2018 AM393_RS04110 42fcbd179ee0c1585dc9b451be6d01e2 267 SMART SM00062 36 265 9.7E-33 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM393_RS04110 42fcbd179ee0c1585dc9b451be6d01e2 267 SUPERFAMILY SSF53850 13 264 1.09E-44 T 28-03-2018 AM393_RS04110 42fcbd179ee0c1585dc9b451be6d01e2 267 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 38 261 3.1E-44 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM393_RS04110 42fcbd179ee0c1585dc9b451be6d01e2 267 Gene3D G3DSA:3.40.190.10 158 265 2.0E-9 T 28-03-2018 AM393_RS13260 a0c1b6c9e425995f3994bd7a291d4c25 472 Pfam PF03606 C4-dicarboxylate anaerobic carrier 10 466 1.6E-113 T 28-03-2018 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 AM393_RS02445 8ab82b42e00254a8179427cb91ed486f 386 Pfam PF00916 Sulfate permease family 129 314 2.8E-23 T 28-03-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 AM393_RS02445 8ab82b42e00254a8179427cb91ed486f 386 Pfam PF00916 Sulfate permease family 2 123 1.8E-16 T 28-03-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 AM393_RS27650 f37f52d28123df5eb4f018a8d068a8d3 68 SUPERFAMILY SSF46689 10 64 2.15E-6 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS27650 f37f52d28123df5eb4f018a8d068a8d3 68 Pfam PF13518 Helix-turn-helix domain 12 63 1.8E-9 T 28-03-2018 AM393_RS23075 9c30d8dee37d97149a512fb20d077587 925 Gene3D G3DSA:3.20.20.70 1 354 7.3E-99 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM393_RS23075 9c30d8dee37d97149a512fb20d077587 925 SMART SM00900 387 464 0.0024 T 28-03-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 AM393_RS23075 9c30d8dee37d97149a512fb20d077587 925 SUPERFAMILY SSF51395 5 349 1.17E-97 T 28-03-2018 AM393_RS23075 9c30d8dee37d97149a512fb20d077587 925 Pfam PF00890 FAD binding domain 483 905 4.0E-87 T 28-03-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM393_RS23075 9c30d8dee37d97149a512fb20d077587 925 SUPERFAMILY SSF56425 719 865 1.94E-43 T 28-03-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM393_RS23075 9c30d8dee37d97149a512fb20d077587 925 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 8 341 1.2E-71 T 28-03-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 AM393_RS23075 9c30d8dee37d97149a512fb20d077587 925 TIGRFAM TIGR01813 flavo_cyto_c: flavocytochrome c 483 916 7.6E-148 T 28-03-2018 IPR010960 Flavocytochrome c GO:0000104|GO:0055114 AM393_RS23075 9c30d8dee37d97149a512fb20d077587 925 Gene3D G3DSA:3.50.50.60 464 748 3.4E-53 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS23075 9c30d8dee37d97149a512fb20d077587 925 Gene3D G3DSA:3.90.700.10 749 856 1.9E-32 T 28-03-2018 AM393_RS23075 9c30d8dee37d97149a512fb20d077587 925 Pfam PF04205 FMN-binding domain 397 461 2.4E-5 T 28-03-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 AM393_RS23075 9c30d8dee37d97149a512fb20d077587 925 SUPERFAMILY SSF51905 478 736 7.79E-58 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS23075 9c30d8dee37d97149a512fb20d077587 925 SUPERFAMILY SSF51905 864 922 7.79E-58 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS06685 49ba1ebf76fbe50540fbe9fbef19fcfd 243 TIGRFAM TIGR02797 exbB: tonB-system energizer ExbB 11 222 3.0E-97 T 28-03-2018 IPR014164 TonB-system energizer ExbB type-1 GO:0006810|GO:0016020 AM393_RS06685 49ba1ebf76fbe50540fbe9fbef19fcfd 243 Pfam PF01618 MotA/TolQ/ExbB proton channel family 84 205 9.7E-35 T 28-03-2018 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 AM393_RS25365 936c1dbbc248425aaa7f3d610a544d02 346 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 5 121 6.6E-22 T 28-03-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 AM393_RS25365 936c1dbbc248425aaa7f3d610a544d02 346 Gene3D G3DSA:3.30.360.10 136 345 1.3E-34 T 28-03-2018 AM393_RS25365 936c1dbbc248425aaa7f3d610a544d02 346 SUPERFAMILY SSF51735 3 192 2.07E-49 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS25365 936c1dbbc248425aaa7f3d610a544d02 346 Gene3D G3DSA:3.40.50.720 1 135 8.2E-37 T 28-03-2018 AM393_RS25365 936c1dbbc248425aaa7f3d610a544d02 346 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 136 241 3.2E-16 T 28-03-2018 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 AM393_RS28560 360a075640d88f11a92dc760189c7b8a 334 Pfam PF01548 Transposase 7 147 1.0E-18 T 28-03-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 AM393_RS28560 360a075640d88f11a92dc760189c7b8a 334 Pfam PF02371 Transposase IS116/IS110/IS902 family 210 286 1.0E-19 T 28-03-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 AM393_RS20305 a209837a926aa286880cad6b052f4357 206 SUPERFAMILY SSF141868 1 197 7.06E-51 T 28-03-2018 IPR001633 EAL domain AM393_RS20305 a209837a926aa286880cad6b052f4357 206 Gene3D G3DSA:3.20.20.450 1 201 4.9E-53 T 28-03-2018 IPR001633 EAL domain AM393_RS20305 a209837a926aa286880cad6b052f4357 206 Pfam PF00563 EAL domain 1 185 2.6E-41 T 28-03-2018 IPR001633 EAL domain AM393_RS20305 a209837a926aa286880cad6b052f4357 206 SMART SM00052 1 190 2.8E-35 T 28-03-2018 IPR001633 EAL domain AM393_RS04535 d3a2e5dae748f9864407b4e2d857d8a6 156 PRINTS PR00446 Hydrogen uptake protein signature 3 15 1.6E-12 T 28-03-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 AM393_RS04535 d3a2e5dae748f9864407b4e2d857d8a6 156 PRINTS PR00446 Hydrogen uptake protein signature 67 83 1.6E-12 T 28-03-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 AM393_RS04535 d3a2e5dae748f9864407b4e2d857d8a6 156 PRINTS PR00446 Hydrogen uptake protein signature 15 26 1.6E-12 T 28-03-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 AM393_RS04535 d3a2e5dae748f9864407b4e2d857d8a6 156 PRINTS PR00446 Hydrogen uptake protein signature 56 66 1.6E-12 T 28-03-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 AM393_RS04535 d3a2e5dae748f9864407b4e2d857d8a6 156 PRINTS PR00446 Hydrogen uptake protein signature 33 50 1.6E-12 T 28-03-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 AM393_RS04535 d3a2e5dae748f9864407b4e2d857d8a6 156 TIGRFAM TIGR00142 hycI: hydrogenase maturation peptidase HycI 3 146 2.6E-63 T 28-03-2018 IPR004420 Peptidase A31, hydrogenase maturation protease HycI GO:0008233 AM393_RS04535 d3a2e5dae748f9864407b4e2d857d8a6 156 TIGRFAM TIGR00072 hydrog_prot: hydrogenase maturation protease 5 140 4.9E-35 T 28-03-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 AM393_RS04535 d3a2e5dae748f9864407b4e2d857d8a6 156 SUPERFAMILY SSF53163 4 150 2.62E-35 T 28-03-2018 IPR023430 Peptidase HybD-like domain AM393_RS04535 d3a2e5dae748f9864407b4e2d857d8a6 156 Gene3D G3DSA:3.40.50.1450 3 156 1.4E-34 T 28-03-2018 IPR023430 Peptidase HybD-like domain AM393_RS04535 d3a2e5dae748f9864407b4e2d857d8a6 156 Pfam PF01750 Hydrogenase maturation protease 29 140 1.4E-28 T 28-03-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 AM393_RS03705 7126751321fe4ed152141a8e8c3b96ef 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 3.0E-44 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AM393_RS03705 7126751321fe4ed152141a8e8c3b96ef 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 28-03-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 AM393_RS03705 7126751321fe4ed152141a8e8c3b96ef 112 PRINTS PR00340 P-II protein signature 2 17 2.9E-44 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AM393_RS03705 7126751321fe4ed152141a8e8c3b96ef 112 PRINTS PR00340 P-II protein signature 23 41 2.9E-44 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AM393_RS03705 7126751321fe4ed152141a8e8c3b96ef 112 PRINTS PR00340 P-II protein signature 83 103 2.9E-44 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AM393_RS03705 7126751321fe4ed152141a8e8c3b96ef 112 PRINTS PR00340 P-II protein signature 52 75 2.9E-44 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AM393_RS03705 7126751321fe4ed152141a8e8c3b96ef 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 28-03-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 AM393_RS03705 7126751321fe4ed152141a8e8c3b96ef 112 PIRSF PIRSF039144 1 112 9.1E-58 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AM393_RS03705 7126751321fe4ed152141a8e8c3b96ef 112 Gene3D G3DSA:3.30.70.120 1 108 2.7E-49 T 28-03-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal AM393_RS03705 7126751321fe4ed152141a8e8c3b96ef 112 SMART SM00938 4 105 2.0E-67 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AM393_RS03705 7126751321fe4ed152141a8e8c3b96ef 112 SUPERFAMILY SSF54913 1 112 2.22E-46 T 28-03-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta AM393_RS15685 cb37022ff0f2a667c197ff0403d9321b 466 ProSitePatterns PS00218 Amino acid permeases signature. 43 73 - T 28-03-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 AM393_RS15685 cb37022ff0f2a667c197ff0403d9321b 466 Pfam PF00324 Amino acid permease 18 455 6.0E-125 T 28-03-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 AM393_RS15685 cb37022ff0f2a667c197ff0403d9321b 466 TIGRFAM TIGR01773 GABAperm: GABA permease 1 452 5.8E-250 T 28-03-2018 IPR011265 GABA permease GO:0015185|GO:0015812|GO:0016021 AM393_RS15685 cb37022ff0f2a667c197ff0403d9321b 466 PIRSF PIRSF006060 1 459 6.3E-72 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AM393_RS15280 a298a13d360a8d3fe7a1978643800187 504 SUPERFAMILY SSF109604 251 432 4.21E-66 T 28-03-2018 AM393_RS15280 a298a13d360a8d3fe7a1978643800187 504 SUPERFAMILY SSF109604 31 134 4.21E-66 T 28-03-2018 AM393_RS15280 a298a13d360a8d3fe7a1978643800187 504 SUPERFAMILY SSF109604 182 215 4.21E-66 T 28-03-2018 AM393_RS15280 a298a13d360a8d3fe7a1978643800187 504 SUPERFAMILY SSF109604 483 501 4.21E-66 T 28-03-2018 AM393_RS15280 a298a13d360a8d3fe7a1978643800187 504 SMART SM00471 62 282 5.5E-12 T 28-03-2018 IPR003607 HD/PDEase domain AM393_RS15280 a298a13d360a8d3fe7a1978643800187 504 Pfam PF01966 HD domain 66 134 6.0E-10 T 28-03-2018 IPR006674 HD domain AM393_RS15280 a298a13d360a8d3fe7a1978643800187 504 Hamap MF_00030 Deoxyguanosinetriphosphate triphosphohydrolase [dgt]. 1 504 50.774 T 28-03-2018 IPR020779 dNTP triphosphohydrolase, type 1 GO:0000287|GO:0006203|GO:0008832 KEGG: 00230+3.1.5.1 AM393_RS15280 a298a13d360a8d3fe7a1978643800187 504 Gene3D G3DSA:1.10.3210.10 3 262 6.0E-54 T 28-03-2018 AM393_RS15280 a298a13d360a8d3fe7a1978643800187 504 Gene3D G3DSA:1.10.3410.10 263 390 5.5E-23 T 28-03-2018 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain AM393_RS15280 a298a13d360a8d3fe7a1978643800187 504 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 30 502 1.5E-140 T 28-03-2018 IPR006261 dNTP triphosphohydrolase GO:0016793 AM393_RS15280 a298a13d360a8d3fe7a1978643800187 504 Pfam PF13286 Phosphohydrolase-associated domain 439 499 4.2E-5 T 28-03-2018 IPR026875 Phosphohydrolase-associated domain AM393_RS18720 51c9acd12cc5ca619d647c685e759f1e 134 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 6 130 1.0E-50 T 28-03-2018 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 AM393_RS18720 51c9acd12cc5ca619d647c685e759f1e 134 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 9 125 1.5E-48 T 28-03-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 AM393_RS18720 51c9acd12cc5ca619d647c685e759f1e 134 Gene3D G3DSA:3.10.129.10 2 134 3.6E-36 T 28-03-2018 AM393_RS18720 51c9acd12cc5ca619d647c685e759f1e 134 PIRSF PIRSF003230 1 134 1.7E-48 T 28-03-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 AM393_RS18720 51c9acd12cc5ca619d647c685e759f1e 134 Pfam PF03061 Thioesterase superfamily 20 103 9.4E-19 T 28-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AM393_RS18720 51c9acd12cc5ca619d647c685e759f1e 134 SUPERFAMILY SSF54637 4 133 1.47E-38 T 28-03-2018 IPR029069 HotDog domain AM393_RS18720 51c9acd12cc5ca619d647c685e759f1e 134 ProSitePatterns PS01328 4-hydroxybenzoyl-CoA thioesterase family active site. 11 28 - T 28-03-2018 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site GO:0016787 AM393_RS20420 587f424370c7b7ab88bae2b43250846e 198 Hamap MF_01017 NAD(P)H dehydrogenase (quinone). 1 198 40.759 T 28-03-2018 IPR010089 Flavoprotein WrbA-like GO:0003955|GO:0010181 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 AM393_RS20420 587f424370c7b7ab88bae2b43250846e 198 Gene3D G3DSA:3.40.50.360 2 198 3.3E-51 T 28-03-2018 IPR029039 Flavoprotein-like domain AM393_RS20420 587f424370c7b7ab88bae2b43250846e 198 TIGRFAM TIGR01755 flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 2 196 6.6E-101 T 28-03-2018 IPR010089 Flavoprotein WrbA-like GO:0003955|GO:0010181 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 AM393_RS20420 587f424370c7b7ab88bae2b43250846e 198 SUPERFAMILY SSF52218 1 197 5.77E-63 T 28-03-2018 IPR029039 Flavoprotein-like domain AM393_RS20420 587f424370c7b7ab88bae2b43250846e 198 Pfam PF03358 NADPH-dependent FMN reductase 13 142 1.1E-12 T 28-03-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 AM393_RS17750 e858cea6b1ebceaabbd03b47143f15b9 82 ProDom PD027061 YBDJ MEMBRANE TRANSMEMBRANE INNER RAMA 3'REGION ECS0618 36 80 1.0E-19 T 28-03-2018 IPR010590 Protein of unknown function DUF1158 AM393_RS17750 e858cea6b1ebceaabbd03b47143f15b9 82 Pfam PF06643 Protein of unknown function (DUF1158) 1 79 6.1E-47 T 28-03-2018 IPR010590 Protein of unknown function DUF1158 AM393_RS29035 e66dacad5bd95aa0ee351d4b90dbc0be 78 ProDom PD007968 PLASMID MERE URF-1 RESISTANCE MERCURY MERCURIC DELTA URF1 PRECURSOR TNIB 18 78 2.0E-27 T 28-03-2018 IPR007746 MerE GO:0015097|GO:0015694|GO:0016020 AM393_RS29035 e66dacad5bd95aa0ee351d4b90dbc0be 78 Pfam PF05052 MerE protein 1 75 1.7E-47 T 28-03-2018 IPR007746 MerE GO:0015097|GO:0015694|GO:0016020 AM393_RS06410 41f44537a0a30db04fd012e7db579e82 234 Pfam PF04471 Restriction endonuclease 4 113 2.5E-13 T 28-03-2018 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 AM393_RS06410 41f44537a0a30db04fd012e7db579e82 234 Gene3D G3DSA:3.40.1350.10 4 127 1.8E-17 T 28-03-2018 AM393_RS06410 41f44537a0a30db04fd012e7db579e82 234 SUPERFAMILY SSF52980 4 113 3.22E-17 T 28-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AM393_RS25240 5c8a980b3480a129de9d5d58777889c1 189 Gene3D G3DSA:2.60.120.10 83 187 2.5E-12 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AM393_RS25240 5c8a980b3480a129de9d5d58777889c1 189 Gene3D G3DSA:1.10.260.40 2 78 1.7E-16 T 28-03-2018 AM393_RS25240 5c8a980b3480a129de9d5d58777889c1 189 SMART SM00530 10 65 8.7E-15 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM393_RS25240 5c8a980b3480a129de9d5d58777889c1 189 SUPERFAMILY SSF51182 50 175 6.61E-23 T 28-03-2018 IPR011051 RmlC-like cupin domain AM393_RS25240 5c8a980b3480a129de9d5d58777889c1 189 Pfam PF07883 Cupin domain 103 169 8.1E-9 T 28-03-2018 IPR013096 Cupin 2, conserved barrel AM393_RS25240 5c8a980b3480a129de9d5d58777889c1 189 Pfam PF01381 Helix-turn-helix 11 63 6.7E-16 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM393_RS25240 5c8a980b3480a129de9d5d58777889c1 189 SUPERFAMILY SSF47413 2 69 2.95E-18 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM393_RS02360 efbbbbde429de3d867d69832d3fca3d3 335 Hamap MF_00730 Nucleoid-associated protein YejK [yejK]. 3 330 46.683 T 28-03-2018 IPR007358 Nucleoid-associated protein NdpA GO:0009295 AM393_RS02360 efbbbbde429de3d867d69832d3fca3d3 335 Pfam PF04245 37-kD nucleoid-associated bacterial protein 10 324 5.5E-98 T 28-03-2018 IPR007358 Nucleoid-associated protein NdpA GO:0009295 AM393_RS10755 6a3f0ca38c47177404297a2f085adbb4 82 Gene3D G3DSA:1.10.1220.10 7 63 7.0E-14 T 28-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 AM393_RS10755 6a3f0ca38c47177404297a2f085adbb4 82 Pfam PF12651 Ribbon-helix-helix domain 18 49 7.4E-6 T 28-03-2018 AM393_RS20245 1e73c0a79d56cbb36c2d7a27a5f80e48 684 Gene3D G3DSA:3.40.50.300 491 677 1.0E-24 T 28-03-2018 AM393_RS20245 1e73c0a79d56cbb36c2d7a27a5f80e48 684 Pfam PF12462 DNA helicase IV / RNA helicase N terminal 1 163 1.3E-62 T 28-03-2018 IPR022161 DNA helicase IV, N-terminal domain AM393_RS20245 1e73c0a79d56cbb36c2d7a27a5f80e48 684 SUPERFAMILY SSF52540 195 344 2.48E-80 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS20245 1e73c0a79d56cbb36c2d7a27a5f80e48 684 SUPERFAMILY SSF52540 385 674 2.48E-80 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS20245 1e73c0a79d56cbb36c2d7a27a5f80e48 684 Pfam PF13361 UvrD-like helicase C-terminal domain 562 662 1.5E-12 T 28-03-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 AM393_RS20245 1e73c0a79d56cbb36c2d7a27a5f80e48 684 Pfam PF00580 UvrD/REP helicase N-terminal domain 197 489 4.6E-41 T 28-03-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 AM393_RS20245 1e73c0a79d56cbb36c2d7a27a5f80e48 684 Gene3D G3DSA:3.40.50.300 195 490 4.8E-45 T 28-03-2018 AM393_RS27820 56b05343209d03b279442e023326eb9d 301 SUPERFAMILY SSF56112 38 262 1.06E-31 T 28-03-2018 IPR011009 Protein kinase-like domain AM393_RS27820 56b05343209d03b279442e023326eb9d 301 Gene3D G3DSA:3.30.200.20 1 106 1.2E-5 T 28-03-2018 AM393_RS27820 56b05343209d03b279442e023326eb9d 301 Gene3D G3DSA:3.90.1200.10 110 299 3.1E-16 T 28-03-2018 AM393_RS27820 56b05343209d03b279442e023326eb9d 301 Pfam PF01636 Phosphotransferase enzyme family 41 263 1.9E-25 T 28-03-2018 IPR002575 Aminoglycoside phosphotransferase AM393_RS17605 fac8b3d4b3b32be6d8bb36fb08e1c55f 340 Pfam PF01261 Xylose isomerase-like TIM barrel 29 279 2.0E-36 T 28-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AM393_RS17605 fac8b3d4b3b32be6d8bb36fb08e1c55f 340 Gene3D G3DSA:3.20.20.150 5 335 2.4E-49 T 28-03-2018 AM393_RS17605 fac8b3d4b3b32be6d8bb36fb08e1c55f 340 SUPERFAMILY SSF51658 8 323 2.07E-62 T 28-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AM393_RS17605 fac8b3d4b3b32be6d8bb36fb08e1c55f 340 Pfam PF07582 AP endonuclease family 2 C terminus 280 334 7.1E-20 T 28-03-2018 IPR011418 AP endonuclease, family 2, C-terminal AM393_RS17080 2f026f5dd68aa63cb7fce2c0880e06a7 176 Gene3D G3DSA:1.10.530.40 1 175 7.2E-44 T 28-03-2018 IPR023347 Lysozyme domain GO:0003796 AM393_RS17080 2f026f5dd68aa63cb7fce2c0880e06a7 176 Pfam PF00959 Phage lysozyme 47 165 1.5E-25 T 28-03-2018 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 AM393_RS17080 2f026f5dd68aa63cb7fce2c0880e06a7 176 SUPERFAMILY SSF53955 8 171 6.14E-33 T 28-03-2018 IPR023346 Lysozyme-like domain AM393_RS10375 416a808f4fc13ba68768cf7d39153fcd 46 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 44 3.6E-27 T 28-03-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS10375 416a808f4fc13ba68768cf7d39153fcd 46 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 16.163 T 28-03-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS10375 416a808f4fc13ba68768cf7d39153fcd 46 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 28-03-2018 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM393_RS10375 416a808f4fc13ba68768cf7d39153fcd 46 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 31 4.0E-11 T 28-03-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS10375 416a808f4fc13ba68768cf7d39153fcd 46 Pfam PF00468 Ribosomal protein L34 1 44 1.7E-24 T 28-03-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM393_RS25335 909e64eb563d18761555c666a5a571f7 175 SUPERFAMILY SSF81342 4 172 1.8E-28 T 28-03-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 AM393_RS25335 909e64eb563d18761555c666a5a571f7 175 Gene3D G3DSA:1.20.950.20 1 175 6.1E-24 T 28-03-2018 AM393_RS25335 909e64eb563d18761555c666a5a571f7 175 Pfam PF01292 Prokaryotic cytochrome b561 5 172 1.5E-22 T 28-03-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 AM393_RS16325 0913be97167ec052e6b22b3a7ef41abe 324 SUPERFAMILY SSF51430 1 321 5.76E-101 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM393_RS16325 0913be97167ec052e6b22b3a7ef41abe 324 Pfam PF00248 Aldo/keto reductase family 15 312 1.3E-76 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM393_RS16325 0913be97167ec052e6b22b3a7ef41abe 324 PRINTS PR00069 Aldo-keto reductase signature 142 159 1.1E-5 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM393_RS16325 0913be97167ec052e6b22b3a7ef41abe 324 PRINTS PR00069 Aldo-keto reductase signature 111 129 1.1E-5 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM393_RS16325 0913be97167ec052e6b22b3a7ef41abe 324 PRINTS PR00069 Aldo-keto reductase signature 47 71 1.1E-5 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM393_RS16325 0913be97167ec052e6b22b3a7ef41abe 324 Gene3D G3DSA:3.20.20.100 1 321 3.6E-99 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM393_RS22830 dabf93fbc0b9909dc6c6977b7e092bf3 130 ProDom PD021249 YDFO YCGX ENVELOPE CYTOPLASMIC STY1988 CP-933X ECS1626 YBCV PROPHAGE 1 130 2.0E-31 T 28-03-2018 IPR009833 Uncharacterised protein DUF1398 AM393_RS22830 dabf93fbc0b9909dc6c6977b7e092bf3 130 Pfam PF07166 Protein of unknown function (DUF1398) 9 125 2.5E-46 T 28-03-2018 IPR009833 Uncharacterised protein DUF1398 AM393_RS22830 dabf93fbc0b9909dc6c6977b7e092bf3 130 SUPERFAMILY SSF160419 5 125 1.7E-39 T 28-03-2018 IPR009833 Uncharacterised protein DUF1398 AM393_RS22830 dabf93fbc0b9909dc6c6977b7e092bf3 130 Gene3D G3DSA:3.30.1810.10 4 125 4.6E-30 T 28-03-2018 IPR009833 Uncharacterised protein DUF1398 AM393_RS18600 7263c022d383eda82e17f58f20e187e2 492 SUPERFAMILY SSF103473 5 189 1.96E-23 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS18600 7263c022d383eda82e17f58f20e187e2 492 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 140 152 - T 28-03-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 AM393_RS18600 7263c022d383eda82e17f58f20e187e2 492 Hamap MF_01880 Dipeptide permease D [dtpD]. 1 492 56.095 T 28-03-2018 IPR023777 Amino acid/peptide transporter family, dipeptide permease D GO:0005887|GO:0042938 AM393_RS18600 7263c022d383eda82e17f58f20e187e2 492 SUPERFAMILY SSF103473 208 480 5.75E-8 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS18600 7263c022d383eda82e17f58f20e187e2 492 ProSitePatterns PS01022 PTR2 family proton/oligopeptide symporters signature 1. 65 89 - T 28-03-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 AM393_RS18600 7263c022d383eda82e17f58f20e187e2 492 Gene3D G3DSA:1.20.1250.20 5 193 8.2E-28 T 28-03-2018 AM393_RS18600 7263c022d383eda82e17f58f20e187e2 492 Pfam PF00854 POT family 77 443 1.2E-89 T 28-03-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-427975 AM393_RS18600 7263c022d383eda82e17f58f20e187e2 492 Gene3D G3DSA:1.20.1250.20 264 490 9.9E-8 T 28-03-2018 AM393_RS18600 7263c022d383eda82e17f58f20e187e2 492 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 6 464 4.8E-79 T 28-03-2018 IPR005279 Dipeptide/tripeptide permease GO:0015197|GO:0015833|GO:0016020 AM393_RS26235 9819adafdaed816ff7dd575e8f2fb3b0 247 Gene3D G3DSA:3.40.190.10 2 86 2.3E-4 T 28-03-2018 AM393_RS26235 9819adafdaed816ff7dd575e8f2fb3b0 247 Pfam PF13531 Bacterial extracellular solute-binding protein 6 240 2.0E-42 T 28-03-2018 AM393_RS26235 9819adafdaed816ff7dd575e8f2fb3b0 247 SUPERFAMILY SSF53850 5 242 8.83E-32 T 28-03-2018 AM393_RS26235 9819adafdaed816ff7dd575e8f2fb3b0 247 Gene3D G3DSA:3.40.190.10 87 191 3.7E-14 T 28-03-2018 AM393_RS22710 9d31fb60e095162cb170cc13257107d7 311 Gene3D G3DSA:1.10.10.10 20 103 1.2E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS22710 9d31fb60e095162cb170cc13257107d7 311 TIGRFAM TIGR02277 PaaX_trns_reg: phenylacetic acid degradation operon negative regulatory protein PaaX 24 306 1.4E-110 T 28-03-2018 IPR011965 Phenylacetic acid degradation operon negative regulatory protein PaaX GO:0006351 AM393_RS22710 9d31fb60e095162cb170cc13257107d7 311 Pfam PF07848 PaaX-like protein 22 90 8.9E-25 T 28-03-2018 IPR012906 PaaX-like, N-terminal AM393_RS22710 9d31fb60e095162cb170cc13257107d7 311 PIRSF PIRSF020623 4 309 2.2E-131 T 28-03-2018 IPR011965 Phenylacetic acid degradation operon negative regulatory protein PaaX GO:0006351 AM393_RS22710 9d31fb60e095162cb170cc13257107d7 311 Pfam PF08223 PaaX-like protein C-terminal domain 186 284 1.7E-31 T 28-03-2018 IPR013225 PaaX-like, C-terminal AM393_RS24430 ac86f3c71f92d9bbb3bbc90d8b35357d 238 Pfam PF07729 FCD domain 89 210 9.2E-17 T 28-03-2018 IPR011711 GntR, C-terminal AM393_RS24430 ac86f3c71f92d9bbb3bbc90d8b35357d 238 SUPERFAMILY SSF46785 18 82 1.77E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS24430 ac86f3c71f92d9bbb3bbc90d8b35357d 238 Pfam PF00392 Bacterial regulatory proteins, gntR family 18 78 6.1E-16 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM393_RS24430 ac86f3c71f92d9bbb3bbc90d8b35357d 238 SMART SM00345 20 78 1.4E-15 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM393_RS24430 ac86f3c71f92d9bbb3bbc90d8b35357d 238 SMART SM00895 88 211 1.0E-8 T 28-03-2018 IPR011711 GntR, C-terminal AM393_RS24430 ac86f3c71f92d9bbb3bbc90d8b35357d 238 Gene3D G3DSA:1.10.10.10 1 74 3.1E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS24430 ac86f3c71f92d9bbb3bbc90d8b35357d 238 SUPERFAMILY SSF48008 84 215 2.14E-18 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AM393_RS24430 ac86f3c71f92d9bbb3bbc90d8b35357d 238 Gene3D G3DSA:1.20.120.530 75 217 5.7E-22 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AM393_RS03370 09e9ffbd64f95ceb9beb2472cddce17c 291 Pfam PF04228 Putative neutral zinc metallopeptidase 1 287 2.9E-140 T 28-03-2018 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative AM393_RS26345 463258d2a40ad1d89b240b00d3f4294d 204 SUPERFAMILY SSF48498 89 203 1.04E-6 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AM393_RS26345 463258d2a40ad1d89b240b00d3f4294d 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 22 35 6.3E-6 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM393_RS26345 463258d2a40ad1d89b240b00d3f4294d 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 43 66 6.3E-6 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM393_RS26345 463258d2a40ad1d89b240b00d3f4294d 204 SUPERFAMILY SSF46689 10 93 2.77E-18 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS26345 463258d2a40ad1d89b240b00d3f4294d 204 Gene3D G3DSA:1.10.357.10 1 203 4.8E-30 T 28-03-2018 AM393_RS26345 463258d2a40ad1d89b240b00d3f4294d 204 Pfam PF00440 Bacterial regulatory proteins, tetR family 22 67 2.2E-13 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM393_RS00080 c5cd69a8be9af403400d5dcb512d6934 217 Pfam PF09850 Type VI secretion system protein DotU 12 203 1.9E-40 T 28-03-2018 IPR017732 Type IV / VI secretion system, DotU AM393_RS00080 c5cd69a8be9af403400d5dcb512d6934 217 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 9 208 5.3E-47 T 28-03-2018 IPR017732 Type IV / VI secretion system, DotU AM393_RS22745 63f1a674ad5babadd9969348de05fadc 361 Pfam PF13437 HlyD family secretion protein 228 346 1.1E-14 T 28-03-2018 AM393_RS22745 63f1a674ad5babadd9969348de05fadc 361 SUPERFAMILY SSF111369 201 354 8.5E-12 T 28-03-2018 AM393_RS22745 63f1a674ad5babadd9969348de05fadc 361 Pfam PF13533 Biotin-lipoyl like 62 109 1.0E-10 T 28-03-2018 AM393_RS22745 63f1a674ad5babadd9969348de05fadc 361 SUPERFAMILY SSF111369 62 141 6.54E-12 T 28-03-2018 AM393_RS22745 63f1a674ad5babadd9969348de05fadc 361 Gene3D G3DSA:1.20.1600.10 2 195 1.9E-11 T 28-03-2018 AM393_RS22745 63f1a674ad5babadd9969348de05fadc 361 Gene3D G3DSA:1.20.1600.10 196 360 1.4E-17 T 28-03-2018 AM393_RS17000 8941573a70fc5fed90cb46ee89e82eb3 73 Gene3D G3DSA:1.10.260.40 2 63 9.2E-4 T 28-03-2018 AM393_RS17000 8941573a70fc5fed90cb46ee89e82eb3 73 SUPERFAMILY SSF47413 9 60 1.24E-11 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM393_RS17000 8941573a70fc5fed90cb46ee89e82eb3 73 Pfam PF05269 Bacteriophage CII protein 1 60 1.1E-12 T 28-03-2018 IPR007933 Transcription activator CII GO:0003677|GO:0006355 AM393_RS15725 e6bbffb032fa261f001431e2eedfa09c 212 Gene3D G3DSA:3.40.30.10 2 97 2.0E-22 T 28-03-2018 AM393_RS15725 e6bbffb032fa261f001431e2eedfa09c 212 Pfam PF00043 Glutathione S-transferase, C-terminal domain 121 197 2.3E-11 T 28-03-2018 IPR004046 Glutathione S-transferase, C-terminal AM393_RS15725 e6bbffb032fa261f001431e2eedfa09c 212 Pfam PF02798 Glutathione S-transferase, N-terminal domain 2 75 3.0E-11 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AM393_RS15725 e6bbffb032fa261f001431e2eedfa09c 212 SUPERFAMILY SSF52833 1 85 2.15E-20 T 28-03-2018 IPR012336 Thioredoxin-like fold AM393_RS15725 e6bbffb032fa261f001431e2eedfa09c 212 SUPERFAMILY SSF47616 80 203 6.82E-30 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like AM393_RS15725 e6bbffb032fa261f001431e2eedfa09c 212 Gene3D G3DSA:1.20.1050.10 98 202 2.8E-26 T 28-03-2018 AM393_RS19570 9c6293db665309f2722f247dcbf912a0 148 Pfam PF05069 Phage virion morphogenesis family 3 146 1.7E-35 T 28-03-2018 IPR006522 Phage virion morphogensis protein AM393_RS19570 9c6293db665309f2722f247dcbf912a0 148 TIGRFAM TIGR01635 tail_comp_S: phage virion morphogenesis protein 3 131 3.0E-32 T 28-03-2018 IPR006522 Phage virion morphogensis protein AM393_RS05835 06803f414afb795fbb858b4e2dd211af 184 Gene3D G3DSA:3.90.79.10 31 181 4.0E-28 T 28-03-2018 AM393_RS05835 06803f414afb795fbb858b4e2dd211af 184 PIRSF PIRSF018427 1 181 4.0E-58 T 28-03-2018 IPR011876 Isopentenyl-diphosphate delta-isomerase, type 1 GO:0004452|GO:0008299 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922|Reactome: R-HSA-191273 AM393_RS05835 06803f414afb795fbb858b4e2dd211af 184 Hamap MF_00202 Isopentenyl-diphosphate Delta-isomerase [idi]. 4 177 34.058 T 28-03-2018 IPR011876 Isopentenyl-diphosphate delta-isomerase, type 1 GO:0004452|GO:0008299 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922|Reactome: R-HSA-191273 AM393_RS05835 06803f414afb795fbb858b4e2dd211af 184 TIGRFAM TIGR02150 IPP_isom_1: isopentenyl-diphosphate delta-isomerase 6 164 1.8E-48 T 28-03-2018 IPR011876 Isopentenyl-diphosphate delta-isomerase, type 1 GO:0004452|GO:0008299 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922|Reactome: R-HSA-191273 AM393_RS05835 06803f414afb795fbb858b4e2dd211af 184 Pfam PF00293 NUDIX domain 31 161 8.2E-22 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AM393_RS05835 06803f414afb795fbb858b4e2dd211af 184 SUPERFAMILY SSF55811 4 167 1.76E-51 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 AM393_RS20475 cdd7a4eee4875f9828e09f022e29a3ac 131 Pfam PF07007 Lysozyme inhibitor LprI 22 108 2.7E-20 T 28-03-2018 IPR009739 Lysozyme inhibitor LprI, N-terminal AM393_RS25845 8d80b3f51f71aaaeddcfeb7607515f40 307 Gene3D G3DSA:3.40.50.720 3 185 8.9E-43 T 28-03-2018 AM393_RS25845 8d80b3f51f71aaaeddcfeb7607515f40 307 SUPERFAMILY SSF51735 4 183 1.86E-45 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS25845 8d80b3f51f71aaaeddcfeb7607515f40 307 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 187 285 1.9E-19 T 28-03-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 AM393_RS25845 8d80b3f51f71aaaeddcfeb7607515f40 307 Gene3D G3DSA:1.10.1040.10 186 290 2.5E-23 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AM393_RS25845 8d80b3f51f71aaaeddcfeb7607515f40 307 PIRSF PIRSF000105 1 306 1.5E-76 T 28-03-2018 IPR022694 3-hydroxyacyl-CoA dehydrogenase GO:0003857|GO:0006631|GO:0055114|GO:0070403 AM393_RS25845 8d80b3f51f71aaaeddcfeb7607515f40 307 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 6 182 6.6E-50 T 28-03-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 AM393_RS25845 8d80b3f51f71aaaeddcfeb7607515f40 307 SUPERFAMILY SSF48179 186 292 5.87E-22 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AM393_RS27765 994592b92a76e446a0250abf6d1ab19f 92 Pfam PF10723 Replication regulatory protein RepB 1 81 9.5E-33 T 28-03-2018 IPR019661 Replication regulatory protein RepA2 GO:0006276 AM393_RS12070 0130c173a3b30b64e2422c6fd518c039 438 Pfam PF01554 MatE 240 392 3.2E-10 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AM393_RS12070 0130c173a3b30b64e2422c6fd518c039 438 Pfam PF01554 MatE 16 176 9.8E-35 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AM393_RS12070 0130c173a3b30b64e2422c6fd518c039 438 TIGRFAM TIGR00797 matE: MATE efflux family protein 16 409 3.6E-100 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AM393_RS04955 2b80a5fb761b4396f7735bbee4645ebb 109 PIRSF PIRSF006257 1 108 9.8E-39 T 28-03-2018 IPR007384 Protein of unknown function UCP006257 AM393_RS04955 2b80a5fb761b4396f7735bbee4645ebb 109 SUPERFAMILY SSF158452 1 106 4.05E-37 T 28-03-2018 IPR023376 YqcC-like domain AM393_RS04955 2b80a5fb761b4396f7735bbee4645ebb 109 Gene3D G3DSA:1.20.1440.40 3 104 9.8E-37 T 28-03-2018 IPR023376 YqcC-like domain AM393_RS04955 2b80a5fb761b4396f7735bbee4645ebb 109 Pfam PF04287 tRNA pseudouridine synthase C 7 103 4.9E-34 T 28-03-2018 IPR023376 YqcC-like domain AM393_RS07860 dcff7e3c03ba7caf5d22e4a373d76130 489 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 426 1.7E-178 T 28-03-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 AM393_RS07860 dcff7e3c03ba7caf5d22e4a373d76130 489 Gene3D G3DSA:2.40.50.140 32 127 5.7E-31 T 28-03-2018 AM393_RS07860 dcff7e3c03ba7caf5d22e4a373d76130 489 SUPERFAMILY SSF50249 39 128 2.62E-19 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM393_RS07860 dcff7e3c03ba7caf5d22e4a373d76130 489 Pfam PF00575 S1 RNA binding domain 38 109 1.5E-6 T 28-03-2018 IPR003029 S1 domain GO:0003676 AM393_RS07860 dcff7e3c03ba7caf5d22e4a373d76130 489 Pfam PF10150 Ribonuclease E/G family 124 393 2.1E-102 T 28-03-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 AM393_RS07860 dcff7e3c03ba7caf5d22e4a373d76130 489 SMART SM00316 37 122 1.2E-9 T 28-03-2018 IPR022967 RNA-binding domain, S1 AM393_RS14115 ead1ffa29431b85c27d3d0240f0d2ba1 240 Pfam PF00196 Bacterial regulatory proteins, luxR family 154 207 1.2E-10 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS14115 ead1ffa29431b85c27d3d0240f0d2ba1 240 Gene3D G3DSA:1.10.10.10 51 217 5.7E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS14115 ead1ffa29431b85c27d3d0240f0d2ba1 240 SUPERFAMILY SSF46894 145 209 3.33E-13 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM393_RS14115 ead1ffa29431b85c27d3d0240f0d2ba1 240 SMART SM00421 151 208 7.1E-13 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS14115 ead1ffa29431b85c27d3d0240f0d2ba1 240 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 184 196 4.7E-5 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS14115 ead1ffa29431b85c27d3d0240f0d2ba1 240 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 184 4.7E-5 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS14115 ead1ffa29431b85c27d3d0240f0d2ba1 240 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 154 168 4.7E-5 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS27760 541c3b7a14b34d3e5357f8e5c1186ed9 81 Pfam PF08048 Tap RepA1 leader peptide 57 81 3.1E-13 T 28-03-2018 IPR012605 RepA1 leader peptide Tap AM393_RS27760 541c3b7a14b34d3e5357f8e5c1186ed9 81 TIGRFAM TIGR03475 tap_IncFII_lead: RepA leader peptide Tap 57 81 1.1E-15 T 28-03-2018 IPR012605 RepA1 leader peptide Tap AM393_RS06055 bff2ea17346f08c3c53010a2cf3be512 264 SUPERFAMILY SSF51735 6 261 1.37E-65 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS06055 bff2ea17346f08c3c53010a2cf3be512 264 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 260 1.2E-43 T 28-03-2018 AM393_RS06055 bff2ea17346f08c3c53010a2cf3be512 264 Gene3D G3DSA:3.40.50.720 53 263 6.2E-45 T 28-03-2018 AM393_RS06055 bff2ea17346f08c3c53010a2cf3be512 264 Gene3D G3DSA:3.40.50.720 1 52 9.0E-12 T 28-03-2018 AM393_RS06055 bff2ea17346f08c3c53010a2cf3be512 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 6.8E-27 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS06055 bff2ea17346f08c3c53010a2cf3be512 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 6.8E-27 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS06055 bff2ea17346f08c3c53010a2cf3be512 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 6.8E-27 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS06055 bff2ea17346f08c3c53010a2cf3be512 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 6.8E-27 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS06055 bff2ea17346f08c3c53010a2cf3be512 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 224 244 6.8E-27 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS12005 00132a1623f5b121b221cccea19b1af0 136 Pfam PF06146 Phosphate-starvation-inducible E 63 123 2.2E-15 T 28-03-2018 IPR020948 Phosphate-starvation-induced PsiE-like AM393_RS12005 00132a1623f5b121b221cccea19b1af0 136 Hamap MF_01048 Protein PsiE [psiE]. 3 136 24.857 T 28-03-2018 IPR009315 Phosphate-starvation-induced PsiE GO:0016021|GO:0016036 AM393_RS12005 00132a1623f5b121b221cccea19b1af0 136 PIRSF PIRSF029598 1 136 1.6E-50 T 28-03-2018 IPR009315 Phosphate-starvation-induced PsiE GO:0016021|GO:0016036 AM393_RS15425 90aae41dcc72825fde2597aa1fb59307 66 Pfam PF06786 Uncharacterised protein family (UPF0253) 2 65 3.8E-35 T 28-03-2018 IPR009624 Uncharacterised protein family UPF0253 AM393_RS15425 90aae41dcc72825fde2597aa1fb59307 66 Hamap MF_01064 UPF0253 protein YaeP [yaeP]. 1 66 26.694 T 28-03-2018 IPR009624 Uncharacterised protein family UPF0253 AM393_RS15425 90aae41dcc72825fde2597aa1fb59307 66 ProDom PD054643 UPF0253 YAEP CYTOPLASMIC VP2335 YPO1064.1/Y3113/YP2785 VC0872 VV2574 PBPRA2947 VV11836 1 66 3.0E-28 T 28-03-2018 IPR009624 Uncharacterised protein family UPF0253 AM393_RS21900 dfc14613f44225c401854393ae53f817 168 SUPERFAMILY SSF52833 4 164 8.08E-44 T 28-03-2018 IPR012336 Thioredoxin-like fold AM393_RS21900 dfc14613f44225c401854393ae53f817 168 Pfam PF08534 Redoxin 20 163 1.7E-30 T 28-03-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 AM393_RS21900 dfc14613f44225c401854393ae53f817 168 ProSitePatterns PS01265 Tpx family signature. 84 95 - T 28-03-2018 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 AM393_RS21900 dfc14613f44225c401854393ae53f817 168 Hamap MF_00269 Probable thiol peroxidase [tpx]. 4 167 39.909 T 28-03-2018 IPR002065 Putative thiol peroxidase Tpx GO:0008379|GO:0016209|GO:0055114 AM393_RS21900 dfc14613f44225c401854393ae53f817 168 Gene3D G3DSA:3.40.30.10 6 168 9.8E-24 T 28-03-2018 AM393_RS05165 b5c4d969f1423de46989a9c105d14232 245 TIGRFAM TIGR00123 cbiM: cobalamin biosynthesis protein CbiM 31 240 1.4E-112 T 28-03-2018 IPR018024 Cobalamin (vitamin B12) biosynthesis protein CbiM GO:0006824|GO:0009236|GO:0016021|GO:0043190 AM393_RS05165 b5c4d969f1423de46989a9c105d14232 245 Pfam PF01891 Cobalt uptake substrate-specific transmembrane region 32 238 4.1E-54 T 28-03-2018 IPR002751 Cobalamin (vitamin B12) biosynthesis CbiM family GO:0000041|GO:0016021 AM393_RS05165 b5c4d969f1423de46989a9c105d14232 245 Hamap MF_01462 Cobalt transport protein CbiM [cbiM]. 31 243 27.694 T 28-03-2018 IPR018024 Cobalamin (vitamin B12) biosynthesis protein CbiM GO:0006824|GO:0009236|GO:0016021|GO:0043190 AM393_RS10665 69c2bfc0fa42eb22b3ad51a3ab10739a 207 Gene3D G3DSA:3.40.30.10 17 207 3.6E-34 T 28-03-2018 AM393_RS10665 69c2bfc0fa42eb22b3ad51a3ab10739a 207 ProSitePatterns PS00194 Thioredoxin family active site. 41 59 - T 28-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AM393_RS10665 69c2bfc0fa42eb22b3ad51a3ab10739a 207 Pfam PF01323 DSBA-like thioredoxin domain 40 196 5.0E-28 T 28-03-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590 AM393_RS10665 69c2bfc0fa42eb22b3ad51a3ab10739a 207 SUPERFAMILY SSF52833 21 205 2.63E-46 T 28-03-2018 IPR012336 Thioredoxin-like fold AM393_RS10665 69c2bfc0fa42eb22b3ad51a3ab10739a 207 PIRSF PIRSF001488 1 207 8.3E-87 T 28-03-2018 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL AM393_RS05205 7153a55cffde045b8395cd2ecb27cdd2 201 Gene3D G3DSA:3.40.1010.10 1 111 1.8E-22 T 28-03-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AM393_RS05205 7153a55cffde045b8395cd2ecb27cdd2 201 SUPERFAMILY SSF53790 1 198 4.32E-43 T 28-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AM393_RS05205 7153a55cffde045b8395cd2ecb27cdd2 201 Gene3D G3DSA:3.30.950.10 112 201 5.1E-23 T 28-03-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AM393_RS05205 7153a55cffde045b8395cd2ecb27cdd2 201 TIGRFAM TIGR02467 CbiE: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit 4 195 8.1E-61 T 28-03-2018 IPR012818 Cobalamin (vitamin B12) biosynthesis CbiE, precorrin-6Y methyltransferase GO:0008276|GO:0009236 AM393_RS05205 7153a55cffde045b8395cd2ecb27cdd2 201 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 1 179 5.9E-27 T 28-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AM393_RS00490 08b1b2ea5c3bdf69ebbf0e11566e206f 294 Hamap MF_00188 Protease HtpX [htpX]. 1 290 26.669 T 28-03-2018 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 AM393_RS00490 08b1b2ea5c3bdf69ebbf0e11566e206f 294 Gene3D G3DSA:3.30.2010.10 64 157 4.2E-21 T 28-03-2018 AM393_RS00490 08b1b2ea5c3bdf69ebbf0e11566e206f 294 Pfam PF01435 Peptidase family M48 74 289 3.9E-39 T 28-03-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 AM393_RS27975 91042cd4b83118d42dfb4de101680bbe 243 PIRSF PIRSF002859 1 243 5.2E-144 T 28-03-2018 IPR008874 Enterobacterial TraT complement resistance GO:0019867|GO:0046999 AM393_RS27975 91042cd4b83118d42dfb4de101680bbe 243 Pfam PF05818 Enterobacterial TraT complement resistance protein 32 243 2.5E-81 T 28-03-2018 IPR008874 Enterobacterial TraT complement resistance GO:0019867|GO:0046999 AM393_RS24025 989d7d87ceba633f23f52422427237eb 328 Gene3D G3DSA:3.20.20.100 3 317 8.5E-97 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM393_RS24025 989d7d87ceba633f23f52422427237eb 328 Pfam PF00248 Aldo/keto reductase family 15 315 8.3E-75 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM393_RS24025 989d7d87ceba633f23f52422427237eb 328 SUPERFAMILY SSF51430 1 317 1.15E-99 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM393_RS21155 daf2beeb6e506b2b3c93b8e69ea4d4f7 263 SUPERFAMILY SSF46689 211 256 4.48E-7 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS21155 daf2beeb6e506b2b3c93b8e69ea4d4f7 263 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 210 251 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM393_RS21155 daf2beeb6e506b2b3c93b8e69ea4d4f7 263 Gene3D G3DSA:2.60.120.10 7 164 1.5E-7 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AM393_RS21155 daf2beeb6e506b2b3c93b8e69ea4d4f7 263 Gene3D G3DSA:1.10.10.60 165 211 3.9E-8 T 28-03-2018 AM393_RS21155 daf2beeb6e506b2b3c93b8e69ea4d4f7 263 Pfam PF12833 Helix-turn-helix domain 179 255 3.1E-19 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM393_RS21155 daf2beeb6e506b2b3c93b8e69ea4d4f7 263 Gene3D G3DSA:1.10.10.60 212 258 4.2E-6 T 28-03-2018 AM393_RS21155 daf2beeb6e506b2b3c93b8e69ea4d4f7 263 SUPERFAMILY SSF51182 18 182 5.34E-13 T 28-03-2018 IPR011051 RmlC-like cupin domain AM393_RS21155 daf2beeb6e506b2b3c93b8e69ea4d4f7 263 SMART SM00342 172 255 5.3E-20 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM393_RS22755 5540adc0a487763847e15b98108896e6 143 Pfam PF12802 MarR family 30 89 1.0E-10 T 28-03-2018 AM393_RS22755 5540adc0a487763847e15b98108896e6 143 Gene3D G3DSA:1.10.10.10 14 109 2.9E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS22755 5540adc0a487763847e15b98108896e6 143 SMART SM00347 25 126 1.3E-23 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM393_RS22755 5540adc0a487763847e15b98108896e6 143 Gene3D G3DSA:1.10.287.100 110 143 9.5E-4 T 28-03-2018 AM393_RS22755 5540adc0a487763847e15b98108896e6 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 50 66 1.1E-15 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM393_RS22755 5540adc0a487763847e15b98108896e6 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 67 82 1.1E-15 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM393_RS22755 5540adc0a487763847e15b98108896e6 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 116 136 1.1E-15 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM393_RS22755 5540adc0a487763847e15b98108896e6 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 86 102 1.1E-15 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM393_RS22755 5540adc0a487763847e15b98108896e6 143 SUPERFAMILY SSF46785 5 140 7.11E-32 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS22335 543a8b5dd3b91d1dc24514c5e834ec03 259 Pfam PF13503 Domain of unknown function (DUF4123) 24 143 8.6E-12 T 28-03-2018 IPR025391 Domain of unknown function DUF4123 AM393_RS15595 186614939a242c042c112e160d2f4240 255 Pfam PF13230 Glutamine amidotransferases class-II 1 252 1.9E-114 T 28-03-2018 IPR026869 Putative glutamine amidotransferase type 2 AM393_RS15595 186614939a242c042c112e160d2f4240 255 Gene3D G3DSA:3.60.20.10 1 255 1.2E-45 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AM393_RS15595 186614939a242c042c112e160d2f4240 255 SUPERFAMILY SSF56235 2 253 8.78E-52 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AM393_RS22055 60fbbd99ed0c11c3a1c7b80ce6a851bf 222 SMART SM00530 10 65 7.8E-9 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM393_RS22055 60fbbd99ed0c11c3a1c7b80ce6a851bf 222 Gene3D G3DSA:2.10.109.10 89 217 2.5E-19 T 28-03-2018 AM393_RS22055 60fbbd99ed0c11c3a1c7b80ce6a851bf 222 Pfam PF01381 Helix-turn-helix 13 59 9.8E-12 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM393_RS22055 60fbbd99ed0c11c3a1c7b80ce6a851bf 222 Pfam PF00717 Peptidase S24-like 134 206 9.5E-17 T 28-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AM393_RS22055 60fbbd99ed0c11c3a1c7b80ce6a851bf 222 SUPERFAMILY SSF51306 91 215 8.37E-29 T 28-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AM393_RS22055 60fbbd99ed0c11c3a1c7b80ce6a851bf 222 SUPERFAMILY SSF47413 5 64 5.36E-13 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM393_RS22055 60fbbd99ed0c11c3a1c7b80ce6a851bf 222 Gene3D G3DSA:3.30.1190.10 30 88 2.3E-9 T 28-03-2018 AM393_RS22055 60fbbd99ed0c11c3a1c7b80ce6a851bf 222 Gene3D G3DSA:1.10.10.60 1 29 2.1E-5 T 28-03-2018 AM393_RS27785 cc6b486e5b1fdd3ef2e0197e6ec9c485 130 Gene3D G3DSA:3.40.50.850 11 130 1.9E-19 T 28-03-2018 AM393_RS27785 cc6b486e5b1fdd3ef2e0197e6ec9c485 130 Pfam PF00857 Isochorismatase family 38 121 1.3E-14 T 28-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AM393_RS27785 cc6b486e5b1fdd3ef2e0197e6ec9c485 130 SUPERFAMILY SSF52499 38 129 9.42E-23 T 28-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AM393_RS05640 d7e2717f959819f6b4f019d6ee044559 69 SUPERFAMILY SSF159871 3 67 1.24E-11 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 AM393_RS05640 d7e2717f959819f6b4f019d6ee044559 69 Pfam PF07338 Protein of unknown function (DUF1471) 25 67 3.1E-8 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 AM393_RS05640 d7e2717f959819f6b4f019d6ee044559 69 Gene3D G3DSA:3.30.1660.10 3 69 1.5E-14 T 28-03-2018 IPR025543 Dodecin-like AM393_RS08480 674e96bc9828c7966fb146ff5601847e 200 SUPERFAMILY SSF140931 49 196 6.41E-32 T 28-03-2018 IPR003812 Fido domain AM393_RS08480 674e96bc9828c7966fb146ff5601847e 200 Pfam PF02661 Fic/DOC family 58 152 2.7E-14 T 28-03-2018 IPR003812 Fido domain AM393_RS08480 674e96bc9828c7966fb146ff5601847e 200 Gene3D G3DSA:1.10.3290.10 18 199 5.6E-26 T 28-03-2018 IPR003812 Fido domain AM393_RS07305 46b0ae4f6e97b42595afbab3641360e7 316 Pfam PF00294 pfkB family carbohydrate kinase 5 301 1.5E-49 T 28-03-2018 IPR011611 Carbohydrate kinase PfkB AM393_RS07305 46b0ae4f6e97b42595afbab3641360e7 316 Gene3D G3DSA:3.40.1190.20 3 316 1.9E-62 T 28-03-2018 IPR029056 Ribokinase-like AM393_RS07305 46b0ae4f6e97b42595afbab3641360e7 316 SUPERFAMILY SSF53613 2 311 1.03E-72 T 28-03-2018 IPR029056 Ribokinase-like AM393_RS17965 0bfc56cfc3cd8aa028e080d1837418d2 311 Gene3D G3DSA:3.40.50.970 1 180 5.1E-30 T 28-03-2018 AM393_RS17965 0bfc56cfc3cd8aa028e080d1837418d2 311 Pfam PF02779 Transketolase, pyrimidine binding domain 11 168 1.2E-19 T 28-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AM393_RS17965 0bfc56cfc3cd8aa028e080d1837418d2 311 SUPERFAMILY SSF52922 176 310 1.96E-31 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AM393_RS17965 0bfc56cfc3cd8aa028e080d1837418d2 311 Gene3D G3DSA:3.40.50.920 181 311 2.5E-35 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AM393_RS17965 0bfc56cfc3cd8aa028e080d1837418d2 311 SMART SM00861 5 170 6.3E-28 T 28-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AM393_RS17965 0bfc56cfc3cd8aa028e080d1837418d2 311 Pfam PF02780 Transketolase, C-terminal domain 182 303 6.1E-28 T 28-03-2018 IPR033248 Transketolase, C-terminal domain AM393_RS17965 0bfc56cfc3cd8aa028e080d1837418d2 311 SUPERFAMILY SSF52518 6 175 9.58E-38 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold AM393_RS11220 d98f0d73e1783f7d25acfc3cac393b25 296 Gene3D G3DSA:3.40.190.10 175 267 5.5E-12 T 28-03-2018 AM393_RS11220 d98f0d73e1783f7d25acfc3cac393b25 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.8E-21 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS11220 d98f0d73e1783f7d25acfc3cac393b25 296 Pfam PF03466 LysR substrate binding domain 89 293 2.7E-37 T 28-03-2018 IPR005119 LysR, substrate-binding AM393_RS11220 d98f0d73e1783f7d25acfc3cac393b25 296 Gene3D G3DSA:1.10.10.10 1 83 1.0E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS11220 d98f0d73e1783f7d25acfc3cac393b25 296 SUPERFAMILY SSF46785 2 111 4.86E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS11220 d98f0d73e1783f7d25acfc3cac393b25 296 Gene3D G3DSA:3.40.190.10 88 174 8.7E-19 T 28-03-2018 AM393_RS11220 d98f0d73e1783f7d25acfc3cac393b25 296 SUPERFAMILY SSF53850 89 294 5.43E-32 T 28-03-2018 AM393_RS11220 d98f0d73e1783f7d25acfc3cac393b25 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.7E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS11220 d98f0d73e1783f7d25acfc3cac393b25 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.7E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS11220 d98f0d73e1783f7d25acfc3cac393b25 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.7E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS09225 7ebe638677708102deacbcae5b084fc3 1350 Pfam PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) 926 1347 9.5E-139 T 28-03-2018 IPR008410 Cellulose synthase operon C, C-terminal GO:0019867|GO:0030244 AM393_RS09225 7ebe638677708102deacbcae5b084fc3 1350 Gene3D G3DSA:1.25.40.10 576 838 2.8E-19 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM393_RS09225 7ebe638677708102deacbcae5b084fc3 1350 SUPERFAMILY SSF48452 464 524 8.47E-7 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM393_RS09225 7ebe638677708102deacbcae5b084fc3 1350 SUPERFAMILY SSF48452 689 811 1.97E-7 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM393_RS09225 7ebe638677708102deacbcae5b084fc3 1350 Gene3D G3DSA:1.25.40.10 35 211 1.0E-10 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM393_RS09225 7ebe638677708102deacbcae5b084fc3 1350 PRINTS PR01441 Cellulose synthase subunit C signature 189 206 3.8E-22 T 28-03-2018 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 AM393_RS09225 7ebe638677708102deacbcae5b084fc3 1350 PRINTS PR01441 Cellulose synthase subunit C signature 159 171 3.8E-22 T 28-03-2018 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 AM393_RS09225 7ebe638677708102deacbcae5b084fc3 1350 PRINTS PR01441 Cellulose synthase subunit C signature 1212 1236 3.8E-22 T 28-03-2018 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 AM393_RS09225 7ebe638677708102deacbcae5b084fc3 1350 PRINTS PR01441 Cellulose synthase subunit C signature 496 516 3.8E-22 T 28-03-2018 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 AM393_RS09225 7ebe638677708102deacbcae5b084fc3 1350 PRINTS PR01441 Cellulose synthase subunit C signature 1252 1273 3.8E-22 T 28-03-2018 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 AM393_RS09225 7ebe638677708102deacbcae5b084fc3 1350 Gene3D G3DSA:1.25.40.10 264 352 6.1E-11 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM393_RS09225 7ebe638677708102deacbcae5b084fc3 1350 Gene3D G3DSA:1.25.40.10 353 558 1.1E-20 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM393_RS09225 7ebe638677708102deacbcae5b084fc3 1350 Gene3D G3DSA:2.40.128.130 1037 1346 1.3E-8 T 28-03-2018 AM393_RS09225 7ebe638677708102deacbcae5b084fc3 1350 SUPERFAMILY SSF48452 41 111 1.85E-6 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM393_RS09225 7ebe638677708102deacbcae5b084fc3 1350 SUPERFAMILY SSF48452 175 205 1.85E-6 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM393_RS09225 7ebe638677708102deacbcae5b084fc3 1350 SUPERFAMILY SSF48452 391 443 9.86E-13 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM393_RS09225 7ebe638677708102deacbcae5b084fc3 1350 SUPERFAMILY SSF48452 276 354 9.86E-13 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM393_RS09225 7ebe638677708102deacbcae5b084fc3 1350 SMART SM00028 304 337 7.5 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AM393_RS09225 7ebe638677708102deacbcae5b084fc3 1350 SMART SM00028 785 818 440.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AM393_RS09225 7ebe638677708102deacbcae5b084fc3 1350 SMART SM00028 463 496 23.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AM393_RS09225 7ebe638677708102deacbcae5b084fc3 1350 SMART SM00028 270 303 110.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AM393_RS09225 7ebe638677708102deacbcae5b084fc3 1350 SMART SM00028 41 74 30.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AM393_RS09225 7ebe638677708102deacbcae5b084fc3 1350 SMART SM00028 385 418 100.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AM393_RS09225 7ebe638677708102deacbcae5b084fc3 1350 Pfam PF13432 Tetratricopeptide repeat 276 337 4.6E-4 T 28-03-2018 AM393_RS09225 7ebe638677708102deacbcae5b084fc3 1350 Pfam PF14559 Tetratricopeptide repeat 475 526 2.4E-6 T 28-03-2018 AM393_RS09225 7ebe638677708102deacbcae5b084fc3 1350 Pfam PF14559 Tetratricopeptide repeat 398 451 1.5E-5 T 28-03-2018 AM393_RS14695 a8413a34821a1ee959643db0af0f17f9 536 SUPERFAMILY SSF161098 13 265 2.15E-42 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS14695 a8413a34821a1ee959643db0af0f17f9 536 TIGRFAM TIGR01253 thiP: thiamine/thiamine pyrophosphate ABC transporter, permease protein 11 525 9.5E-260 T 28-03-2018 IPR005947 Thiamine ABC transporter, permease protein GO:0005215|GO:0015888|GO:0016021 AM393_RS14695 a8413a34821a1ee959643db0af0f17f9 536 Gene3D G3DSA:1.10.3720.10 12 272 1.4E-28 T 28-03-2018 AM393_RS14695 a8413a34821a1ee959643db0af0f17f9 536 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 74 268 8.3E-9 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS14695 a8413a34821a1ee959643db0af0f17f9 536 SUPERFAMILY SSF161098 292 527 2.18E-30 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS14695 a8413a34821a1ee959643db0af0f17f9 536 Gene3D G3DSA:1.10.3720.10 322 532 2.0E-23 T 28-03-2018 AM393_RS25980 1ec2ae4a0aec002a070e7dbd777d6fea 152 Gene3D G3DSA:2.40.50.140 27 131 1.1E-30 T 28-03-2018 AM393_RS25980 1ec2ae4a0aec002a070e7dbd777d6fea 152 Pfam PF03100 CcmE 4 137 1.4E-41 T 28-03-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 AM393_RS25980 1ec2ae4a0aec002a070e7dbd777d6fea 152 SUPERFAMILY SSF82093 30 143 2.62E-39 T 28-03-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 AM393_RS25980 1ec2ae4a0aec002a070e7dbd777d6fea 152 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 2 147 30.673 T 28-03-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 AM393_RS18110 940a78452604d4ca83be9c8b285776b3 422 ProSitePatterns PS00616 Histidine acid phosphatases phosphohistidine signature. 33 47 - T 28-03-2018 IPR033379 Histidine acid phosphatase active site AM393_RS18110 940a78452604d4ca83be9c8b285776b3 422 Gene3D G3DSA:3.40.50.1240 18 419 7.2E-45 T 28-03-2018 IPR029033 Histidine phosphatase superfamily AM393_RS18110 940a78452604d4ca83be9c8b285776b3 422 SUPERFAMILY SSF53254 29 409 1.55E-65 T 28-03-2018 IPR029033 Histidine phosphatase superfamily AM393_RS18110 940a78452604d4ca83be9c8b285776b3 422 Pfam PF00328 Histidine phosphatase superfamily (branch 2) 32 357 1.8E-36 T 28-03-2018 IPR000560 Histidine phosphatase superfamily, clade-2 GO:0003993 AM393_RS07700 2173d06be60cb9c66fdb945d4e4925df 90 PRINTS PR00107 Phosphocarrier protein signature 55 72 1.6E-8 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like AM393_RS07700 2173d06be60cb9c66fdb945d4e4925df 90 PRINTS PR00107 Phosphocarrier protein signature 40 55 1.6E-8 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like AM393_RS07700 2173d06be60cb9c66fdb945d4e4925df 90 PRINTS PR00107 Phosphocarrier protein signature 14 30 1.6E-8 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like AM393_RS07700 2173d06be60cb9c66fdb945d4e4925df 90 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 41 56 - T 28-03-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site AM393_RS07700 2173d06be60cb9c66fdb945d4e4925df 90 Gene3D G3DSA:3.30.1340.10 1 89 2.8E-22 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like AM393_RS07700 2173d06be60cb9c66fdb945d4e4925df 90 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 4 84 4.8E-22 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like AM393_RS07700 2173d06be60cb9c66fdb945d4e4925df 90 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 14 21 - T 28-03-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site AM393_RS07700 2173d06be60cb9c66fdb945d4e4925df 90 SUPERFAMILY SSF55594 4 90 2.09E-23 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like AM393_RS07700 2173d06be60cb9c66fdb945d4e4925df 90 Pfam PF00381 PTS HPr component phosphorylation site 4 84 2.7E-22 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like AM393_RS04120 7dd309edb4919882e020f40a919aaf11 242 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 9 188 1.7E-47 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal AM393_RS04120 7dd309edb4919882e020f40a919aaf11 242 SMART SM01007 9 189 3.0E-61 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal AM393_RS04120 7dd309edb4919882e020f40a919aaf11 242 SUPERFAMILY SSF53639 4 195 3.14E-60 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal AM393_RS04120 7dd309edb4919882e020f40a919aaf11 242 Gene3D G3DSA:3.40.225.10 1 242 4.5E-75 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal AM393_RS00580 ce11586bf4538ee2f163d3120afecf94 113 Pfam PF10709 Protein of unknown function (DUF2511) 26 113 2.2E-44 T 28-03-2018 IPR019648 Protein of unknown function DUF2511 AM393_RS16565 44425862f081f18b59022223e349aee9 103 Gene3D G3DSA:1.10.10.10 3 103 2.7E-31 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS16565 44425862f081f18b59022223e349aee9 103 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 6 75 2.8E-14 T 28-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 AM393_RS16565 44425862f081f18b59022223e349aee9 103 SUPERFAMILY SSF46767 5 87 4.45E-26 T 28-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 AM393_RS16565 44425862f081f18b59022223e349aee9 103 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 7 86 6.1E-26 T 28-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 AM393_RS20570 b2947d0b9053b3127555db4af9e12b47 245 Hamap MF_01561 Probable phosphatase YcdX [ycdX]. 1 243 50.863 T 28-03-2018 IPR023710 Probable phosphatase YcdX GO:0008270 AM393_RS20570 b2947d0b9053b3127555db4af9e12b47 245 Pfam PF02811 PHP domain 5 79 2.0E-7 T 28-03-2018 IPR004013 PHP domain GO:0003824 AM393_RS20570 b2947d0b9053b3127555db4af9e12b47 245 Gene3D G3DSA:3.20.20.140 1 245 2.3E-36 T 28-03-2018 AM393_RS20570 b2947d0b9053b3127555db4af9e12b47 245 SUPERFAMILY SSF89550 3 239 5.36E-62 T 28-03-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 AM393_RS20570 b2947d0b9053b3127555db4af9e12b47 245 SMART SM00481 4 78 3.2E-18 T 28-03-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal AM393_RS23170 bcfc521df1fde699532080b3ab2bb050 109 Pfam PF00893 Small Multidrug Resistance protein 6 99 5.1E-28 T 28-03-2018 IPR000390 Small multidrug resistance protein family GO:0016021 AM393_RS23170 bcfc521df1fde699532080b3ab2bb050 109 Hamap MF_01597 Spermidine export protein MdtI [mdtI]. 1 109 34.15 T 28-03-2018 IPR023737 Spermidine export protein MdtI GO:0005886|GO:0015606|GO:0015848 AM393_RS23170 bcfc521df1fde699532080b3ab2bb050 109 SUPERFAMILY SSF103481 12 108 2.35E-17 T 28-03-2018 AM393_RS16620 6f220b6bcfda80e6758f8c49dacda098 410 Gene3D G3DSA:3.40.190.10 23 175 5.4E-25 T 28-03-2018 AM393_RS16620 6f220b6bcfda80e6758f8c49dacda098 410 SUPERFAMILY SSF53850 25 398 8.15E-79 T 28-03-2018 AM393_RS16620 6f220b6bcfda80e6758f8c49dacda098 410 Pfam PF13416 Bacterial extracellular solute-binding protein 45 347 1.7E-50 T 28-03-2018 AM393_RS16620 6f220b6bcfda80e6758f8c49dacda098 410 Gene3D G3DSA:3.40.190.10 176 361 1.5E-10 T 28-03-2018 AM393_RS16620 6f220b6bcfda80e6758f8c49dacda098 410 PRINTS PR00181 Maltose binding protein signature 361 380 2.6E-5 T 28-03-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0006810 AM393_RS16620 6f220b6bcfda80e6758f8c49dacda098 410 PRINTS PR00181 Maltose binding protein signature 68 86 2.6E-5 T 28-03-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0006810 AM393_RS16620 6f220b6bcfda80e6758f8c49dacda098 410 PRINTS PR00181 Maltose binding protein signature 128 147 2.6E-5 T 28-03-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0006810 AM393_RS24290 ca9cef2635d1c69b4e1e45c13e53f7ec 245 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS24290 ca9cef2635d1c69b4e1e45c13e53f7ec 245 SMART SM00382 28 215 1.1E-17 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS24290 ca9cef2635d1c69b4e1e45c13e53f7ec 245 Gene3D G3DSA:3.40.50.300 1 244 2.2E-76 T 28-03-2018 AM393_RS24290 ca9cef2635d1c69b4e1e45c13e53f7ec 245 Pfam PF00005 ABC transporter 19 167 4.7E-36 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS24290 ca9cef2635d1c69b4e1e45c13e53f7ec 245 PIRSF PIRSF039085 1 243 1.2E-111 T 28-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 AM393_RS24290 ca9cef2635d1c69b4e1e45c13e53f7ec 245 SUPERFAMILY SSF52540 3 236 1.42E-78 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS00935 cc87e17dbcd3714f807a0227ba35186b 65 Hamap MF_01549 Protein DsrB [dsrB]. 3 64 27.721 T 28-03-2018 IPR019717 Dextransucrase DSRB AM393_RS00935 cc87e17dbcd3714f807a0227ba35186b 65 Pfam PF10781 Dextransucrase DSRB 3 62 6.4E-36 T 28-03-2018 IPR019717 Dextransucrase DSRB AM393_RS27960 58c1f56c11be0ac5d9382d50682edf12 1752 SUPERFAMILY SSF52540 938 1107 3.71E-20 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS27960 58c1f56c11be0ac5d9382d50682edf12 1752 SUPERFAMILY SSF55464 1 300 1.24E-95 T 28-03-2018 AM393_RS27960 58c1f56c11be0ac5d9382d50682edf12 1752 SUPERFAMILY SSF52540 1330 1452 3.72E-25 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS27960 58c1f56c11be0ac5d9382d50682edf12 1752 SUPERFAMILY SSF52540 1221 1253 3.72E-25 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS27960 58c1f56c11be0ac5d9382d50682edf12 1752 SUPERFAMILY SSF52540 1090 1148 3.72E-25 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS27960 58c1f56c11be0ac5d9382d50682edf12 1752 Gene3D G3DSA:3.40.50.300 1127 1457 6.8E-8 T 28-03-2018 AM393_RS27960 58c1f56c11be0ac5d9382d50682edf12 1752 TIGRFAM TIGR02760 TraI_TIGR: conjugative transfer relaxase protein TraI 1 1464 0.0 T 28-03-2018 IPR014129 Conjugative transfer relaxase protein TraI AM393_RS27960 58c1f56c11be0ac5d9382d50682edf12 1752 Pfam PF13604 AAA domain 970 1156 2.1E-34 T 28-03-2018 AM393_RS27960 58c1f56c11be0ac5d9382d50682edf12 1752 Pfam PF08751 TrwC relaxase 10 283 1.7E-73 T 28-03-2018 IPR014862 TrwC relaxase AM393_RS27960 58c1f56c11be0ac5d9382d50682edf12 1752 TIGRFAM TIGR02686 relax_trwC: conjugative relaxase domain 13 288 8.9E-101 T 28-03-2018 IPR014059 Conjugative relaxase, N-terminal AM393_RS27960 58c1f56c11be0ac5d9382d50682edf12 1752 Pfam PF07057 DNA helicase TraI 1432 1550 8.3E-57 T 28-03-2018 IPR009767 DNA helicase, TraI type GO:0000746|GO:0003677|GO:0003678|GO:0005524|GO:0016818 AM393_RS27960 58c1f56c11be0ac5d9382d50682edf12 1752 Gene3D G3DSA:3.40.50.300 820 1126 2.9E-16 T 28-03-2018 AM393_RS21265 e787b5d2d6362b95e766fa44a8cd1a90 137 SUPERFAMILY SSF51316 5 132 1.2E-58 T 28-03-2018 IPR011057 Mss4-like AM393_RS21265 e787b5d2d6362b95e766fa44a8cd1a90 137 Gene3D G3DSA:2.170.150.20 1 136 2.7E-58 T 28-03-2018 AM393_RS21265 e787b5d2d6362b95e766fa44a8cd1a90 137 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 3 129 38.09 T 28-03-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 AM393_RS21265 e787b5d2d6362b95e766fa44a8cd1a90 137 Pfam PF01641 SelR domain 9 127 2.3E-54 T 28-03-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 AM393_RS21265 e787b5d2d6362b95e766fa44a8cd1a90 137 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 5 135 2.9E-64 T 28-03-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 AM393_RS27550 7c37b293373687c32fb5549e2e59e484 120 Pfam PF06953 Arsenical resistance operon trans-acting repressor ArsD 1 120 2.2E-47 T 28-03-2018 IPR010712 Arsenical-resistance operon trans-acting repressor ArsD GO:0003677|GO:0045892|GO:0046685 AM393_RS15410 bd9bae1c70bffe0efe9d0f36216e99e6 129 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 126 1.8E-22 T 28-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AM393_RS15410 bd9bae1c70bffe0efe9d0f36216e99e6 129 Gene3D G3DSA:3.10.180.10 1 129 1.1E-29 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM393_RS15410 bd9bae1c70bffe0efe9d0f36216e99e6 129 SUPERFAMILY SSF54593 3 128 2.95E-34 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM393_RS23355 13f140248d2b2fd0f7774dba33f9f6bf 308 Gene3D G3DSA:1.10.10.60 58 121 3.4E-12 T 28-03-2018 AM393_RS23355 13f140248d2b2fd0f7774dba33f9f6bf 308 SUPERFAMILY SSF55136 202 286 2.28E-8 T 28-03-2018 AM393_RS23355 13f140248d2b2fd0f7774dba33f9f6bf 308 SUPERFAMILY SSF46689 56 105 7.17E-11 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS23355 13f140248d2b2fd0f7774dba33f9f6bf 308 SMART SM00342 20 103 1.3E-20 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM393_RS23355 13f140248d2b2fd0f7774dba33f9f6bf 308 Pfam PF12833 Helix-turn-helix domain 26 103 3.8E-15 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM393_RS23355 13f140248d2b2fd0f7774dba33f9f6bf 308 Gene3D G3DSA:1.10.10.60 1 57 3.2E-4 T 28-03-2018 AM393_RS23355 13f140248d2b2fd0f7774dba33f9f6bf 308 Gene3D G3DSA:3.20.80.10 129 291 1.1E-5 T 28-03-2018 IPR011256 Regulatory factor, effector binding domain AM393_RS23355 13f140248d2b2fd0f7774dba33f9f6bf 308 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 87 103 6.3E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM393_RS23355 13f140248d2b2fd0f7774dba33f9f6bf 308 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 72 87 6.3E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM393_RS24740 eea0b9944918a124edd24a55520e964c 290 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 55 286 2.7E-58 T 28-03-2018 AM393_RS24740 eea0b9944918a124edd24a55520e964c 290 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 47 64 6.7E-33 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS24740 eea0b9944918a124edd24a55520e964c 290 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 233 6.7E-33 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS24740 eea0b9944918a124edd24a55520e964c 290 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 123 134 6.7E-33 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS24740 eea0b9944918a124edd24a55520e964c 290 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 195 214 6.7E-33 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS24740 eea0b9944918a124edd24a55520e964c 290 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 251 271 6.7E-33 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS24740 eea0b9944918a124edd24a55520e964c 290 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 185 6.7E-33 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS24740 eea0b9944918a124edd24a55520e964c 290 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 123 134 2.2E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS24740 eea0b9944918a124edd24a55520e964c 290 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 175 183 2.2E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS24740 eea0b9944918a124edd24a55520e964c 290 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 195 214 2.2E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS24740 eea0b9944918a124edd24a55520e964c 290 SUPERFAMILY SSF51735 45 286 9.02E-79 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS24740 eea0b9944918a124edd24a55520e964c 290 Gene3D G3DSA:3.40.50.720 3 290 9.0E-78 T 28-03-2018 AM393_RS04775 1df4590b63013c9ec659a6a67442e1fa 135 SUPERFAMILY SSF46785 2 134 2.31E-32 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS04775 1df4590b63013c9ec659a6a67442e1fa 135 SMART SM00347 21 122 3.8E-23 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM393_RS04775 1df4590b63013c9ec659a6a67442e1fa 135 Gene3D G3DSA:1.10.10.10 1 134 1.5E-27 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS04775 1df4590b63013c9ec659a6a67442e1fa 135 ProSitePatterns PS01117 MarR-type HTH domain signature. 61 95 - T 28-03-2018 IPR023187 Transcriptional regulator MarR-type, conserved site AM393_RS04775 1df4590b63013c9ec659a6a67442e1fa 135 Pfam PF01047 MarR family 29 85 2.0E-13 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM393_RS04775 1df4590b63013c9ec659a6a67442e1fa 135 PRINTS PR00598 Bacterial regulatory protein MarR family signature 112 132 4.5E-11 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM393_RS04775 1df4590b63013c9ec659a6a67442e1fa 135 PRINTS PR00598 Bacterial regulatory protein MarR family signature 82 98 4.5E-11 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM393_RS04775 1df4590b63013c9ec659a6a67442e1fa 135 PRINTS PR00598 Bacterial regulatory protein MarR family signature 63 78 4.5E-11 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM393_RS14705 e18f0c7d11c61586d8e55e7a417fa1df 551 Pfam PF12793 Sugar transport-related sRNA regulator N-term 5 118 2.5E-41 T 28-03-2018 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain AM393_RS14705 e18f0c7d11c61586d8e55e7a417fa1df 551 Gene3D G3DSA:3.40.190.10 257 373 5.7E-9 T 28-03-2018 AM393_RS14705 e18f0c7d11c61586d8e55e7a417fa1df 551 Gene3D G3DSA:3.90.76.10 129 256 2.9E-21 T 28-03-2018 AM393_RS14705 e18f0c7d11c61586d8e55e7a417fa1df 551 SUPERFAMILY SSF53850 117 548 7.6E-63 T 28-03-2018 AM393_RS14705 e18f0c7d11c61586d8e55e7a417fa1df 551 SUPERFAMILY SSF46785 21 84 2.07E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS14705 e18f0c7d11c61586d8e55e7a417fa1df 551 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 165 306 2.1E-17 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain AM393_RS14705 e18f0c7d11c61586d8e55e7a417fa1df 551 Gene3D G3DSA:1.10.10.10 5 97 1.1E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS02740 47ea4bf1f388e0fad5a051f305e4b738 151 Pfam PF04217 Protein of unknown function, DUF412 11 149 5.7E-58 T 28-03-2018 IPR007334 Uncharacterised protein family UPF0208 AM393_RS02740 47ea4bf1f388e0fad5a051f305e4b738 151 Hamap MF_01101 UPF0208 membrane protein YfbV [yfbV]. 9 151 36.482 T 28-03-2018 IPR007334 Uncharacterised protein family UPF0208 AM393_RS04035 40d01a68e3967314ee394adc944d4f2f 96 Gene3D G3DSA:3.10.20.280 1 88 1.2E-33 T 28-03-2018 IPR005346 RnfH protein AM393_RS04035 40d01a68e3967314ee394adc944d4f2f 96 Hamap MF_00460 Protein RnfH [rnfH]. 5 95 25.351 T 28-03-2018 IPR005346 RnfH protein AM393_RS04035 40d01a68e3967314ee394adc944d4f2f 96 Pfam PF03658 RnfH family Ubiquitin 5 87 1.3E-33 T 28-03-2018 IPR005346 RnfH protein AM393_RS04035 40d01a68e3967314ee394adc944d4f2f 96 SUPERFAMILY SSF54285 5 79 1.03E-25 T 28-03-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp AM393_RS17935 0e37607b33f7a819b4600fe7761536a7 206 SUPERFAMILY SSF141318 40 188 3.66E-15 T 28-03-2018 IPR014582 Uncharacterised conserved protein UCP033535, periplasmic lipoprotein AM393_RS17935 0e37607b33f7a819b4600fe7761536a7 206 Pfam PF10054 Predicted periplasmic lipoprotein (DUF2291) 9 200 2.4E-51 T 28-03-2018 IPR014582 Uncharacterised conserved protein UCP033535, periplasmic lipoprotein AM393_RS12700 37a170d5c5944f9cf37f834da27dd1b4 131 ProDom PD015900 FUMARATE MEMBRANE REDUCTASE C SUBUNIT TRANSMEMBRANE INNER HYDROPHOBIC REDUCTASE POLYPEPTIDE 8 114 1.0E-43 T 28-03-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 AM393_RS12700 37a170d5c5944f9cf37f834da27dd1b4 131 SUPERFAMILY SSF81343 2 131 4.03E-58 T 28-03-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM393_RS12700 37a170d5c5944f9cf37f834da27dd1b4 131 Gene3D G3DSA:1.20.1300.10 3 128 2.7E-57 T 28-03-2018 AM393_RS12700 37a170d5c5944f9cf37f834da27dd1b4 131 Pfam PF02300 Fumarate reductase subunit C 3 128 4.7E-56 T 28-03-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 AM393_RS12700 37a170d5c5944f9cf37f834da27dd1b4 131 Hamap MF_00708 Fumarate reductase subunit C [frdC]. 2 128 29.732 T 28-03-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 AM393_RS12700 37a170d5c5944f9cf37f834da27dd1b4 131 PIRSF PIRSF000180 2 130 9.9E-60 T 28-03-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 AM393_RS24065 b699a02f4d8f52d708ac14c881320955 213 SUPERFAMILY SSF56281 19 210 7.7E-21 T 28-03-2018 IPR001279 Metallo-beta-lactamase AM393_RS24065 b699a02f4d8f52d708ac14c881320955 213 SMART SM00849 21 205 0.0052 T 28-03-2018 IPR001279 Metallo-beta-lactamase AM393_RS24065 b699a02f4d8f52d708ac14c881320955 213 Gene3D G3DSA:3.60.15.10 12 210 2.3E-17 T 28-03-2018 IPR001279 Metallo-beta-lactamase AM393_RS24065 b699a02f4d8f52d708ac14c881320955 213 Pfam PF00753 Metallo-beta-lactamase superfamily 52 136 6.9E-5 T 28-03-2018 IPR001279 Metallo-beta-lactamase AM393_RS11125 4edeffa326527d979df73c59308ded7a 366 Hamap MF_01011 tRNA/tmRNA (uracil-C(5))-methyltransferase [trmA]. 4 366 42.858 T 28-03-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 AM393_RS11125 4edeffa326527d979df73c59308ded7a 366 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 348 358 - T 28-03-2018 IPR030391 RNA methyltransferase TrmA, conserved site AM393_RS11125 4edeffa326527d979df73c59308ded7a 366 Gene3D G3DSA:3.40.50.150 156 366 1.9E-35 T 28-03-2018 AM393_RS11125 4edeffa326527d979df73c59308ded7a 366 SUPERFAMILY SSF53335 6 365 3.89E-53 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM393_RS11125 4edeffa326527d979df73c59308ded7a 366 TIGRFAM TIGR02143 trmA_only: tRNA (uracil(54)-C(5))-methyltransferase 10 366 2.5E-186 T 28-03-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 AM393_RS11125 4edeffa326527d979df73c59308ded7a 366 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 299 328 - T 28-03-2018 IPR030390 RNA methyltransferase TrmA, active site AM393_RS11125 4edeffa326527d979df73c59308ded7a 366 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 10 366 1.6E-190 T 28-03-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 AM393_RS06910 f6145bf805807b3340e28e2ad5505b44 224 Hamap MF_01385 Urease accessory protein UreF [ureF]. 6 224 29.839 T 28-03-2018 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 AM393_RS06910 f6145bf805807b3340e28e2ad5505b44 224 Pfam PF01730 UreF 40 181 3.1E-32 T 28-03-2018 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 AM393_RS06910 f6145bf805807b3340e28e2ad5505b44 224 PIRSF PIRSF009467 3 224 8.1E-68 T 28-03-2018 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 AM393_RS09155 bb82ee39a911cd2c38e446d5a4177452 500 Pfam PF05193 Peptidase M16 inactive domain 200 377 2.1E-19 T 28-03-2018 IPR007863 Peptidase M16, C-terminal AM393_RS09155 bb82ee39a911cd2c38e446d5a4177452 500 SUPERFAMILY SSF63411 29 239 5.24E-23 T 28-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AM393_RS09155 bb82ee39a911cd2c38e446d5a4177452 500 Gene3D G3DSA:3.30.830.10 16 250 9.2E-28 T 28-03-2018 AM393_RS09155 bb82ee39a911cd2c38e446d5a4177452 500 Pfam PF00675 Insulinase (Peptidase family M16) 50 158 5.7E-6 T 28-03-2018 IPR011765 Peptidase M16, N-terminal AM393_RS09155 bb82ee39a911cd2c38e446d5a4177452 500 Gene3D G3DSA:3.30.830.10 256 471 5.3E-26 T 28-03-2018 AM393_RS09155 bb82ee39a911cd2c38e446d5a4177452 500 SUPERFAMILY SSF63411 261 462 4.37E-9 T 28-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AM393_RS05025 1747512975ce4c1a150a4a6faac604f8 465 Pfam PF13454 FAD-NAD(P)-binding 8 157 7.8E-30 T 28-03-2018 AM393_RS05025 1747512975ce4c1a150a4a6faac604f8 465 Gene3D G3DSA:3.50.50.60 1 178 1.4E-17 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS05025 1747512975ce4c1a150a4a6faac604f8 465 SUPERFAMILY SSF51905 7 48 1.57E-11 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS05025 1747512975ce4c1a150a4a6faac604f8 465 SUPERFAMILY SSF51905 190 225 1.57E-11 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS05025 1747512975ce4c1a150a4a6faac604f8 465 SUPERFAMILY SSF51905 303 449 1.57E-11 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS05025 1747512975ce4c1a150a4a6faac604f8 465 SUPERFAMILY SSF51905 2 222 4.7E-21 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS05025 1747512975ce4c1a150a4a6faac604f8 465 Gene3D G3DSA:3.50.50.60 184 454 2.1E-8 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS20040 9b8d7213b03ecddf162bb8a8eeb233b3 440 PIRSF PIRSF018282 1 440 1.7E-243 T 28-03-2018 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 AM393_RS20040 9b8d7213b03ecddf162bb8a8eeb233b3 440 Pfam PF17192 MukF middle domain 121 281 1.4E-84 T 28-03-2018 IPR033440 Chromosome partition protein MukF, middle domain AM393_RS20040 9b8d7213b03ecddf162bb8a8eeb233b3 440 Pfam PF17193 MukF C-terminal domain 283 440 5.4E-79 T 28-03-2018 IPR033441 Chromosome partition protein MukF, C-terminal domain AM393_RS20040 9b8d7213b03ecddf162bb8a8eeb233b3 440 Gene3D G3DSA:1.10.10.10 24 116 1.1E-40 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS20040 9b8d7213b03ecddf162bb8a8eeb233b3 440 SUPERFAMILY SSF140570 119 281 1.96E-77 T 28-03-2018 IPR033440 Chromosome partition protein MukF, middle domain AM393_RS20040 9b8d7213b03ecddf162bb8a8eeb233b3 440 SUPERFAMILY SSF46785 8 118 2.84E-49 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS20040 9b8d7213b03ecddf162bb8a8eeb233b3 440 Pfam PF03882 MukF winged-helix domain 3 117 9.3E-58 T 28-03-2018 IPR033439 Chromosome partition protein MukF, winged-helix domain AM393_RS20040 9b8d7213b03ecddf162bb8a8eeb233b3 440 Hamap MF_01803 Chromosome partition protein MukF [mukF]. 1 440 57.23 T 28-03-2018 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 AM393_RS19635 2493a9226dc14cba24f587bc833ab6da 39 Pfam PF06528 Phage P2 GpE 1 36 5.3E-19 T 28-03-2018 IPR009493 Burkholderia phage phiE202, Gp27 AM393_RS20290 1342d65b012d6258ee60438e07c5e765 219 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 19 213 3.6E-42 T 28-03-2018 IPR006214 Bax inhibitor 1-related AM393_RS20290 1342d65b012d6258ee60438e07c5e765 219 ProSitePatterns PS01243 Bax inhibitor-1 family signature. 87 117 - T 28-03-2018 IPR006213 Bax inhibitor 1, conserved site GO:0016021|GO:0043066 AM393_RS20880 6bffbc1f4008e658af88264ad0e2a2f8 414 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 4 413 2.9E-162 T 28-03-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 AM393_RS20880 6bffbc1f4008e658af88264ad0e2a2f8 414 Pfam PF02687 FtsX-like permease family 302 407 5.8E-12 T 28-03-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AM393_RS20880 6bffbc1f4008e658af88264ad0e2a2f8 414 Gene3D G3DSA:1.20.1250.20 1 406 0.0012 T 28-03-2018 AM393_RS20880 6bffbc1f4008e658af88264ad0e2a2f8 414 Pfam PF12704 MacB-like periplasmic core domain 27 239 4.4E-15 T 28-03-2018 IPR025857 MacB-like periplasmic core domain AM393_RS20880 6bffbc1f4008e658af88264ad0e2a2f8 414 TIGRFAM TIGR02213 lolE_release: lipoprotein releasing system, transmembrane protein LolE 5 414 2.5E-224 T 28-03-2018 IPR011926 Lipoprotein-releasing system transmembrane protein LolC/E, gammaproteobacteria type GO:0006810|GO:0009276|GO:0016021 AM393_RS08665 b5a9ec1f7e0361bb21c99ac73a78ee10 224 SUPERFAMILY SSF53271 46 222 3.41E-34 T 28-03-2018 IPR029057 Phosphoribosyltransferase-like AM393_RS08665 b5a9ec1f7e0361bb21c99ac73a78ee10 224 Gene3D G3DSA:3.40.50.2020 60 224 2.7E-26 T 28-03-2018 AM393_RS07345 3533b436948fbf3fecbc90a9858a7517 94 SUPERFAMILY SSF52794 3 89 1.44E-17 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AM393_RS07345 3533b436948fbf3fecbc90a9858a7517 94 Gene3D G3DSA:3.40.50.2300 2 94 5.3E-20 T 28-03-2018 AM393_RS07345 3533b436948fbf3fecbc90a9858a7517 94 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 4 84 2.0E-12 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AM393_RS23295 303127db0703c47d813d2067827a6e74 681 Gene3D G3DSA:1.10.1370.10 146 375 2.0E-32 T 28-03-2018 AM393_RS23295 303127db0703c47d813d2067827a6e74 681 Gene3D G3DSA:1.10.1370.10 430 681 1.3E-55 T 28-03-2018 AM393_RS23295 303127db0703c47d813d2067827a6e74 681 Gene3D G3DSA:1.20.1050.40 10 144 8.5E-38 T 28-03-2018 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal AM393_RS23295 303127db0703c47d813d2067827a6e74 681 SUPERFAMILY SSF55486 12 678 8.9E-167 T 28-03-2018 AM393_RS23295 303127db0703c47d813d2067827a6e74 681 Pfam PF01432 Peptidase family M3 232 678 9.1E-132 T 28-03-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 AM393_RS18180 d4c7b6bcc3aee9c7f7f9200ee1ee4ffb 326 Pfam PF13407 Periplasmic binding protein domain 35 295 1.4E-45 T 28-03-2018 IPR025997 Periplasmic binding protein AM393_RS18180 d4c7b6bcc3aee9c7f7f9200ee1ee4ffb 326 Gene3D G3DSA:3.40.50.2300 19 146 6.3E-20 T 28-03-2018 AM393_RS18180 d4c7b6bcc3aee9c7f7f9200ee1ee4ffb 326 Gene3D G3DSA:3.40.50.2300 147 301 1.3E-20 T 28-03-2018 AM393_RS18180 d4c7b6bcc3aee9c7f7f9200ee1ee4ffb 326 SUPERFAMILY SSF53822 32 307 2.04E-48 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AM393_RS18615 8fdae8ac0f2fef674c150a62e3897a40 310 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 1 310 1.5E-125 T 28-03-2018 IPR003778 Carboxyltransferase domain, subdomain A and B AM393_RS18615 8fdae8ac0f2fef674c150a62e3897a40 310 SUPERFAMILY SSF50891 174 288 1.18E-11 T 28-03-2018 IPR029000 Cyclophilin-like domain AM393_RS18615 8fdae8ac0f2fef674c150a62e3897a40 310 SMART SM00797 23 298 7.7E-144 T 28-03-2018 IPR003778 Carboxyltransferase domain, subdomain A and B AM393_RS18615 8fdae8ac0f2fef674c150a62e3897a40 310 Pfam PF02626 Carboxyltransferase domain, subdomain A and B 24 281 6.9E-93 T 28-03-2018 IPR003778 Carboxyltransferase domain, subdomain A and B AM393_RS05005 3d919cf3c32b0be62e50c76a0890a06f 292 Gene3D G3DSA:3.40.190.10 45 139 6.8E-7 T 28-03-2018 AM393_RS05005 3d919cf3c32b0be62e50c76a0890a06f 292 Pfam PF03180 NLPA lipoprotein 59 277 1.7E-36 T 28-03-2018 IPR004872 Lipoprotein NlpA family AM393_RS05005 3d919cf3c32b0be62e50c76a0890a06f 292 Gene3D G3DSA:3.40.190.10 140 236 4.6E-25 T 28-03-2018 AM393_RS05005 3d919cf3c32b0be62e50c76a0890a06f 292 SUPERFAMILY SSF53850 48 279 3.98E-31 T 28-03-2018 AM393_RS07840 79e1669aa2383636db411cc9abd0a99f 67 Pfam PF07869 Protein of unknown function (DUF1656) 7 61 1.5E-20 T 28-03-2018 IPR012451 Protein of unknown function DUF1656 AM393_RS07840 79e1669aa2383636db411cc9abd0a99f 67 Hamap MF_01546 Protein AaeX [aaeX]. 1 67 24.388 T 28-03-2018 IPR012451 Protein of unknown function DUF1656 AM393_RS11485 f2ca375d388319213c6fcb08be8c371d 266 Gene3D G3DSA:3.40.50.1000 2 266 1.1E-37 T 28-03-2018 IPR023214 HAD-like domain AM393_RS11485 f2ca375d388319213c6fcb08be8c371d 266 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 28-03-2018 AM393_RS11485 f2ca375d388319213c6fcb08be8c371d 266 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 231 7.1E-28 T 28-03-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 AM393_RS11485 f2ca375d388319213c6fcb08be8c371d 266 SUPERFAMILY SSF56784 1 264 2.44E-70 T 28-03-2018 IPR023214 HAD-like domain AM393_RS11485 f2ca375d388319213c6fcb08be8c371d 266 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 260 6.4E-65 T 28-03-2018 IPR023214 HAD-like domain AM393_RS11485 f2ca375d388319213c6fcb08be8c371d 266 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 260 1.8E-68 T 28-03-2018 IPR000150 Cof family GO:0016787 AM393_RS11485 f2ca375d388319213c6fcb08be8c371d 266 ProSitePatterns PS01229 Hypothetical cof family signature 2. 212 234 - T 28-03-2018 AM393_RS07240 82b1aa0148224d9318f1ffec236b048b 130 Pfam PF07681 DoxX 9 87 2.7E-17 T 28-03-2018 IPR032808 DoxX family AM393_RS10840 e9989fcfe81a21a41da041a9ec7ee919 219 Pfam PF03591 AzlC protein 19 154 1.4E-29 T 28-03-2018 IPR011606 Branched-chain amino acid transport, permease AM393_RS07420 fa9a1425885cfd6448f2c0537caeedb2 167 Gene3D G3DSA:3.40.630.30 3 128 2.3E-18 T 28-03-2018 AM393_RS07420 fa9a1425885cfd6448f2c0537caeedb2 167 Pfam PF13508 Acetyltransferase (GNAT) domain 45 124 8.1E-12 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AM393_RS07420 fa9a1425885cfd6448f2c0537caeedb2 167 SUPERFAMILY SSF55729 2 163 2.36E-25 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM393_RS20055 cfb85d46dfd414c8ce716c54dbc13365 596 Gene3D G3DSA:2.40.440.10 355 536 4.0E-23 T 28-03-2018 AM393_RS20055 cfb85d46dfd414c8ce716c54dbc13365 596 Pfam PF01471 Putative peptidoglycan binding domain 255 329 1.0E-7 T 28-03-2018 IPR002477 Peptidoglycan binding-like AM393_RS20055 cfb85d46dfd414c8ce716c54dbc13365 596 Gene3D G3DSA:1.10.101.10 238 335 2.1E-18 T 28-03-2018 IPR002477 Peptidoglycan binding-like AM393_RS20055 cfb85d46dfd414c8ce716c54dbc13365 596 SUPERFAMILY SSF141523 356 409 6.41E-20 T 28-03-2018 AM393_RS20055 cfb85d46dfd414c8ce716c54dbc13365 596 SUPERFAMILY SSF141523 465 514 6.41E-20 T 28-03-2018 AM393_RS20055 cfb85d46dfd414c8ce716c54dbc13365 596 SUPERFAMILY SSF47090 238 336 7.06E-12 T 28-03-2018 IPR002477 Peptidoglycan binding-like AM393_RS20055 cfb85d46dfd414c8ce716c54dbc13365 596 Pfam PF03734 L,D-transpeptidase catalytic domain 358 524 3.0E-30 T 28-03-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 AM393_RS00010 30e81b4a502e6732e83e06587c98c3a1 297 Pfam PF03781 Sulfatase-modifying factor enzyme 1 39 251 1.6E-37 T 28-03-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 AM393_RS00010 30e81b4a502e6732e83e06587c98c3a1 297 Gene3D G3DSA:3.90.1580.10 23 297 2.5E-49 T 28-03-2018 AM393_RS00010 30e81b4a502e6732e83e06587c98c3a1 297 SUPERFAMILY SSF56436 40 251 2.26E-47 T 28-03-2018 IPR016187 C-type lectin fold AM393_RS13115 f0346c02ee94e37716ec917b7d6d1a68 99 TIGRFAM TIGR03578 EF_0831: conserved hypothetical protein EF_0831/AHA_3912 2 96 1.3E-41 T 28-03-2018 IPR020037 Protein of unknown function DUF4312 AM393_RS13115 f0346c02ee94e37716ec917b7d6d1a68 99 Pfam PF14189 Domain of unknown function (DUF4312) 5 88 9.2E-35 T 28-03-2018 IPR020037 Protein of unknown function DUF4312 AM393_RS04065 1160f77f4bc396548ff91d80b36415cb 190 Pfam PF01613 Flavin reductase like domain 47 148 1.1E-8 T 28-03-2018 IPR002563 Flavin reductase like domain GO:0010181 AM393_RS04065 1160f77f4bc396548ff91d80b36415cb 190 Gene3D G3DSA:2.30.110.10 7 187 1.0E-27 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 AM393_RS04065 1160f77f4bc396548ff91d80b36415cb 190 SUPERFAMILY SSF50475 2 178 4.51E-29 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 AM393_RS04065 1160f77f4bc396548ff91d80b36415cb 190 SMART SM00903 14 151 6.2E-4 T 28-03-2018 IPR002563 Flavin reductase like domain GO:0010181 AM393_RS01215 39ca3506dfe551a5a46ddf8961bdfaa8 105 SUPERFAMILY SSF52540 1 77 2.8E-18 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS01215 39ca3506dfe551a5a46ddf8961bdfaa8 105 Gene3D G3DSA:3.40.50.300 1 77 4.6E-19 T 28-03-2018 AM393_RS18165 f109390a04d4648f5fcec413580760ae 334 Pfam PF02653 Branched-chain amino acid transport system / permease component 53 320 1.9E-34 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AM393_RS18165 f109390a04d4648f5fcec413580760ae 334 Gene3D G3DSA:1.10.3470.10 45 326 2.4E-27 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AM393_RS07415 1e3b699d75f56ce3040b8adb1c090138 94 Gene3D G3DSA:3.40.1440.10 2 90 5.1E-5 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily AM393_RS07415 1e3b699d75f56ce3040b8adb1c090138 94 SUPERFAMILY SSF82771 3 72 4.97E-11 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily AM393_RS07415 1e3b699d75f56ce3040b8adb1c090138 94 Pfam PF01541 GIY-YIG catalytic domain 2 73 2.9E-14 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily AM393_RS23330 abb8d9078ffb06ba5f14cd6696a13322 157 SUPERFAMILY SSF49764 16 146 4.88E-19 T 28-03-2018 IPR008978 HSP20-like chaperone AM393_RS23330 abb8d9078ffb06ba5f14cd6696a13322 157 Gene3D G3DSA:2.60.40.790 11 147 6.2E-21 T 28-03-2018 IPR008978 HSP20-like chaperone AM393_RS23330 abb8d9078ffb06ba5f14cd6696a13322 157 Pfam PF00011 Hsp20/alpha crystallin family 47 146 8.1E-15 T 28-03-2018 IPR002068 Alpha crystallin/Hsp20 domain AM393_RS09985 ef9370210beb68fcfcd996d3526a337c 208 Gene3D G3DSA:1.20.5.170 184 205 0.0018 T 28-03-2018 AM393_RS09985 ef9370210beb68fcfcd996d3526a337c 208 SUPERFAMILY SSF50475 43 167 4.97E-13 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 AM393_RS09985 ef9370210beb68fcfcd996d3526a337c 208 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 46 132 8.7E-11 T 28-03-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AM393_RS09985 ef9370210beb68fcfcd996d3526a337c 208 Gene3D G3DSA:2.30.110.10 31 183 2.0E-21 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 AM393_RS28870 26e7ba52e1f845848176f6dbccac81a1 228 Pfam PF01936 NYN domain 2 167 1.3E-9 T 28-03-2018 IPR021139 NYN domain, limkain-b1-type AM393_RS28870 26e7ba52e1f845848176f6dbccac81a1 228 Gene3D G3DSA:3.40.50.1010 1 202 2.4E-22 T 28-03-2018 IPR029060 PIN domain-like AM393_RS09645 6adc71f257b7e338ea9eaad433ec49f1 259 SUPERFAMILY SSF53756 4 250 1.26E-28 T 28-03-2018 AM393_RS09645 6adc71f257b7e338ea9eaad433ec49f1 259 Gene3D G3DSA:3.40.50.2000 91 255 2.8E-19 T 28-03-2018 AM393_RS09645 6adc71f257b7e338ea9eaad433ec49f1 259 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 5 226 3.1E-13 T 28-03-2018 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 AM393_RS09645 6adc71f257b7e338ea9eaad433ec49f1 259 Gene3D G3DSA:3.40.50.2000 2 85 6.4E-8 T 28-03-2018 AM393_RS21140 5c323761e27ba3f2fc4c515107256d49 169 Pfam PF04463 Protein of unknown function (DUF523) 6 149 2.6E-37 T 28-03-2018 IPR007553 Domain of unknown function DUF523 AM393_RS02125 ae4971f9e193b7a37143b29c1aa7fade 310 Pfam PF01207 Dihydrouridine synthase (Dus) 5 286 1.3E-89 T 28-03-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AM393_RS02125 ae4971f9e193b7a37143b29c1aa7fade 310 Gene3D G3DSA:3.20.20.70 1 242 1.1E-45 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM393_RS02125 ae4971f9e193b7a37143b29c1aa7fade 310 SUPERFAMILY SSF51395 1 307 1.06E-69 T 28-03-2018 AM393_RS02125 ae4971f9e193b7a37143b29c1aa7fade 310 Hamap MF_02043 tRNA-dihydrouridine(16) synthase [dusC]. 8 310 52.092 T 28-03-2018 IPR032886 tRNA-dihydrouridine(16) synthase GO:0002943|GO:0017150 AM393_RS02125 ae4971f9e193b7a37143b29c1aa7fade 310 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 92 110 - T 28-03-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 AM393_RS02125 ae4971f9e193b7a37143b29c1aa7fade 310 PIRSF PIRSF006621 1 310 5.7E-81 T 28-03-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AM393_RS24185 6a3a9a074f922b1720f29c088a7e3f1c 226 Gene3D G3DSA:3.20.20.70 1 218 3.4E-60 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM393_RS24185 6a3a9a074f922b1720f29c088a7e3f1c 226 Pfam PF00834 Ribulose-phosphate 3 epimerase family 5 198 6.6E-63 T 28-03-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AM393_RS24185 6a3a9a074f922b1720f29c088a7e3f1c 226 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 134 156 - T 28-03-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AM393_RS24185 6a3a9a074f922b1720f29c088a7e3f1c 226 SUPERFAMILY SSF51366 4 218 3.81E-57 T 28-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AM393_RS19290 7fb53be1fb83688796296ccb62ee181c 433 Pfam PF07690 Major Facilitator Superfamily 30 390 1.6E-55 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS19290 7fb53be1fb83688796296ccb62ee181c 433 Gene3D G3DSA:1.20.1250.20 13 216 3.0E-41 T 28-03-2018 AM393_RS19290 7fb53be1fb83688796296ccb62ee181c 433 Gene3D G3DSA:1.20.1250.20 230 433 8.0E-21 T 28-03-2018 AM393_RS19290 7fb53be1fb83688796296ccb62ee181c 433 SUPERFAMILY SSF103473 15 431 4.32E-79 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS01995 6be4e1f2dd93d308adf7e6f181da2474 447 Pfam PF00860 Permease family 31 392 4.0E-29 T 28-03-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 AM393_RS12360 a1aded40a848e67684161cda7f2d6f09 336 SUPERFAMILY SSF53613 2 323 7.64E-54 T 28-03-2018 IPR029056 Ribokinase-like AM393_RS12360 a1aded40a848e67684161cda7f2d6f09 336 Gene3D G3DSA:3.40.1190.20 6 336 9.9E-53 T 28-03-2018 IPR029056 Ribokinase-like AM393_RS12360 a1aded40a848e67684161cda7f2d6f09 336 Pfam PF00294 pfkB family carbohydrate kinase 32 322 4.6E-37 T 28-03-2018 IPR011611 Carbohydrate kinase PfkB AM393_RS04125 1534276c8943853572a56bd90bbb80c5 310 SUPERFAMILY SSF51735 95 276 3.11E-46 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS04125 1534276c8943853572a56bd90bbb80c5 310 SUPERFAMILY SSF52283 34 115 8.22E-8 T 28-03-2018 AM393_RS04125 1534276c8943853572a56bd90bbb80c5 310 Gene3D G3DSA:3.40.50.720 122 276 5.4E-39 T 28-03-2018 AM393_RS04125 1534276c8943853572a56bd90bbb80c5 310 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 214 230 - T 28-03-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AM393_RS04125 1534276c8943853572a56bd90bbb80c5 310 Gene3D G3DSA:3.40.50.720 8 121 2.5E-15 T 28-03-2018 AM393_RS04125 1534276c8943853572a56bd90bbb80c5 310 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 104 275 2.2E-43 T 28-03-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AM393_RS07615 514a6143b552025c1f2a82d322e0877b 84 PIRSF PIRSF003113 1 83 2.7E-21 T 28-03-2018 IPR002634 BolA protein AM393_RS07615 514a6143b552025c1f2a82d322e0877b 84 Gene3D G3DSA:3.30.300.90 1 83 2.7E-25 T 28-03-2018 AM393_RS07615 514a6143b552025c1f2a82d322e0877b 84 SUPERFAMILY SSF82657 2 82 1.57E-28 T 28-03-2018 IPR002634 BolA protein AM393_RS07615 514a6143b552025c1f2a82d322e0877b 84 Pfam PF01722 BolA-like protein 18 74 3.1E-14 T 28-03-2018 IPR002634 BolA protein AM393_RS13420 c9db039d1a2effe4a3b272b4285e3a9e 290 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 79 277 5.0E-21 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS13420 c9db039d1a2effe4a3b272b4285e3a9e 290 Gene3D G3DSA:1.10.3720.10 56 287 9.9E-45 T 28-03-2018 AM393_RS13420 c9db039d1a2effe4a3b272b4285e3a9e 290 Gene3D G3DSA:1.20.58.370 1 36 1.4E-4 T 28-03-2018 IPR035277 Maltose transport system permease protein MalF N-terminal domain AM393_RS13420 c9db039d1a2effe4a3b272b4285e3a9e 290 SUPERFAMILY SSF161098 49 277 4.84E-54 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS24525 c806aa0e6d6e08ee84bf4ac6777f3bcb 339 Gene3D G3DSA:3.20.20.140 1 261 6.9E-75 T 28-03-2018 AM393_RS24525 c806aa0e6d6e08ee84bf4ac6777f3bcb 339 Gene3D G3DSA:3.20.20.140 262 339 5.2E-24 T 28-03-2018 AM393_RS24525 c806aa0e6d6e08ee84bf4ac6777f3bcb 339 SUPERFAMILY SSF51556 1 337 2.45E-85 T 28-03-2018 IPR032466 Metal-dependent hydrolase AM393_RS24525 c806aa0e6d6e08ee84bf4ac6777f3bcb 339 Pfam PF01244 Membrane dipeptidase (Peptidase family M19) 2 334 3.9E-94 T 28-03-2018 IPR008257 Renal dipeptidase family GO:0006508|GO:0016805 MetaCyc: PWY-7533|Reactome: R-HSA-2142691|Reactome: R-HSA-5423646 AM393_RS25725 a7fbb09c692c326bed9933e113f56dbf 330 SUPERFAMILY SSF51735 117 278 6.17E-41 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS25725 a7fbb09c692c326bed9933e113f56dbf 330 Gene3D G3DSA:3.90.180.10 1 141 2.3E-38 T 28-03-2018 AM393_RS25725 a7fbb09c692c326bed9933e113f56dbf 330 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 91 3.1E-9 T 28-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AM393_RS25725 a7fbb09c692c326bed9933e113f56dbf 330 Gene3D G3DSA:3.40.50.720 142 313 3.0E-31 T 28-03-2018 AM393_RS25725 a7fbb09c692c326bed9933e113f56dbf 330 SUPERFAMILY SSF50129 10 147 3.8E-37 T 28-03-2018 IPR011032 GroES-like AM393_RS25725 a7fbb09c692c326bed9933e113f56dbf 330 SMART SM00829 11 327 1.5E-41 T 28-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AM393_RS25725 a7fbb09c692c326bed9933e113f56dbf 330 Pfam PF00107 Zinc-binding dehydrogenase 158 278 1.5E-23 T 28-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AM393_RS19110 5c4d441c02963233b62eee61a67f6cca 368 Pfam PF12698 ABC-2 family transporter protein 25 359 2.0E-46 T 28-03-2018 AM393_RS19110 5c4d441c02963233b62eee61a67f6cca 368 Gene3D G3DSA:3.40.1710.10 38 188 3.6E-24 T 28-03-2018 AM393_RS19110 5c4d441c02963233b62eee61a67f6cca 368 PRINTS PR00164 ABC-2 type transport system membrane protein signature 310 329 1.3E-7 T 28-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AM393_RS19110 5c4d441c02963233b62eee61a67f6cca 368 PRINTS PR00164 ABC-2 type transport system membrane protein signature 290 309 1.3E-7 T 28-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AM393_RS19110 5c4d441c02963233b62eee61a67f6cca 368 PRINTS PR00164 ABC-2 type transport system membrane protein signature 253 277 1.3E-7 T 28-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AM393_RS03010 bfc78f737da61850b975a5775a1bef2f 411 Pfam PF00654 Voltage gated chloride channel 82 366 1.0E-19 T 28-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AM393_RS03010 bfc78f737da61850b975a5775a1bef2f 411 Gene3D G3DSA:1.10.3080.10 4 399 7.2E-32 T 28-03-2018 IPR014743 Chloride channel, core GO:0005216|GO:0055085 Reactome: R-HSA-2672351 AM393_RS03010 bfc78f737da61850b975a5775a1bef2f 411 SUPERFAMILY SSF81340 9 398 8.76E-41 T 28-03-2018 IPR014743 Chloride channel, core GO:0005216|GO:0055085 Reactome: R-HSA-2672351 AM393_RS03010 bfc78f737da61850b975a5775a1bef2f 411 Hamap MF_01115 Putative ion-transport protein YfeO [yfeO]. 9 410 37.457 T 28-03-2018 IPR022969 Chloride channel YfeO AM393_RS00505 19bd2683fdbf8bd1bc3744c838a48bb2 165 ProSitePatterns PS01320 Uncharacterized protein family UPF0067 signature. 90 107 - T 28-03-2018 IPR000614 Free Met sulfoxide reductase conserved site AM393_RS00505 19bd2683fdbf8bd1bc3744c838a48bb2 165 Pfam PF13185 GAF domain 35 149 5.2E-12 T 28-03-2018 IPR003018 GAF domain GO:0005515 AM393_RS00505 19bd2683fdbf8bd1bc3744c838a48bb2 165 SMART SM00065 9 161 1.5E-10 T 28-03-2018 IPR003018 GAF domain GO:0005515 AM393_RS00505 19bd2683fdbf8bd1bc3744c838a48bb2 165 SUPERFAMILY SSF55781 2 147 1.02E-40 T 28-03-2018 IPR029016 GAF domain-like AM393_RS00505 19bd2683fdbf8bd1bc3744c838a48bb2 165 Gene3D G3DSA:3.30.450.40 3 155 2.1E-24 T 28-03-2018 IPR029016 GAF domain-like AM393_RS01935 0a2e6b27753f732bf67225af39daaa5b 455 Gene3D G3DSA:3.40.50.720 2 260 1.9E-83 T 28-03-2018 AM393_RS01935 0a2e6b27753f732bf67225af39daaa5b 455 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 6 166 3.5E-44 T 28-03-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 AM393_RS01935 0a2e6b27753f732bf67225af39daaa5b 455 SUPERFAMILY SSF48179 263 451 4.76E-46 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AM393_RS01935 0a2e6b27753f732bf67225af39daaa5b 455 SUPERFAMILY SSF51735 4 260 2.13E-74 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS01935 0a2e6b27753f732bf67225af39daaa5b 455 Gene3D G3DSA:1.10.1040.10 261 454 2.8E-47 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AM393_RS01935 0a2e6b27753f732bf67225af39daaa5b 455 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 196 439 4.2E-90 T 28-03-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 AM393_RS01935 0a2e6b27753f732bf67225af39daaa5b 455 PRINTS PR00084 Mannitol dehydrogenase signature 7 17 1.4E-16 T 28-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AM393_RS01935 0a2e6b27753f732bf67225af39daaa5b 455 PRINTS PR00084 Mannitol dehydrogenase signature 157 170 1.4E-16 T 28-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AM393_RS01935 0a2e6b27753f732bf67225af39daaa5b 455 PRINTS PR00084 Mannitol dehydrogenase signature 197 210 1.4E-16 T 28-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AM393_RS01935 0a2e6b27753f732bf67225af39daaa5b 455 PRINTS PR00084 Mannitol dehydrogenase signature 227 242 1.4E-16 T 28-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AM393_RS25475 434b2b1ebed2d14252d0b798d13b493e 146 Hamap MF_01819 Transcriptional regulator SlyA [slyA]. 3 145 41.313 T 28-03-2018 IPR023071 Transcriptional regulator, SlyA AM393_RS25475 434b2b1ebed2d14252d0b798d13b493e 146 Pfam PF01047 MarR family 31 89 1.4E-18 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM393_RS25475 434b2b1ebed2d14252d0b798d13b493e 146 ProSitePatterns PS01117 MarR-type HTH domain signature. 64 98 - T 28-03-2018 IPR023187 Transcriptional regulator MarR-type, conserved site AM393_RS25475 434b2b1ebed2d14252d0b798d13b493e 146 SMART SM00347 24 125 2.1E-30 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM393_RS25475 434b2b1ebed2d14252d0b798d13b493e 146 Gene3D G3DSA:1.10.10.10 1 139 3.6E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS25475 434b2b1ebed2d14252d0b798d13b493e 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 49 65 5.7E-28 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM393_RS25475 434b2b1ebed2d14252d0b798d13b493e 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 66 81 5.7E-28 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM393_RS25475 434b2b1ebed2d14252d0b798d13b493e 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 85 101 5.7E-28 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM393_RS25475 434b2b1ebed2d14252d0b798d13b493e 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 115 135 5.7E-28 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM393_RS25475 434b2b1ebed2d14252d0b798d13b493e 146 SUPERFAMILY SSF46785 3 142 2.07E-34 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS10805 7177fb3e88dadcd7d905fb4e7f1202ae 104 Gene3D G3DSA:3.40.50.2300 1 98 1.8E-17 T 28-03-2018 AM393_RS10805 7177fb3e88dadcd7d905fb4e7f1202ae 104 SUPERFAMILY SSF52794 1 94 1.64E-16 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AM393_RS10805 7177fb3e88dadcd7d905fb4e7f1202ae 104 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 3 85 1.5E-8 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AM393_RS28985 d1b40309cf79b2bf619aca1df2758b8d 321 Pfam PF08401 Domain of unknown function (DUF1738) 48 162 2.7E-39 T 28-03-2018 IPR013610 Domain of unknown function DUF1738 AM393_RS28985 d1b40309cf79b2bf619aca1df2758b8d 321 Gene3D G3DSA:3.40.390.10 127 314 7.3E-4 T 28-03-2018 IPR024079 Metallopeptidase, catalytic domain GO:0008237 AM393_RS28985 d1b40309cf79b2bf619aca1df2758b8d 321 PIRSF PIRSF037112 35 321 4.4E-117 T 28-03-2018 IPR017113 Antirestriction, ArdC AM393_RS09120 96101685bdc205da693879bbcbe77282 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 6.8E-32 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS09120 96101685bdc205da693879bbcbe77282 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 6.8E-32 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS09120 96101685bdc205da693879bbcbe77282 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 6.8E-32 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS09120 96101685bdc205da693879bbcbe77282 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 6.8E-32 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS09120 96101685bdc205da693879bbcbe77282 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 6.8E-32 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS09120 96101685bdc205da693879bbcbe77282 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 86 97 6.8E-32 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS09120 96101685bdc205da693879bbcbe77282 252 SUPERFAMILY SSF51735 4 251 2.61E-67 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS09120 96101685bdc205da693879bbcbe77282 252 Gene3D G3DSA:3.40.50.720 1 37 4.4E-6 T 28-03-2018 AM393_RS09120 96101685bdc205da693879bbcbe77282 252 Gene3D G3DSA:3.40.50.720 38 252 1.3E-56 T 28-03-2018 AM393_RS09120 96101685bdc205da693879bbcbe77282 252 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 4 188 0.0042 T 28-03-2018 AM393_RS09120 96101685bdc205da693879bbcbe77282 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 250 2.6E-53 T 28-03-2018 AM393_RS09120 96101685bdc205da693879bbcbe77282 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 2.1E-7 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS09120 96101685bdc205da693879bbcbe77282 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 2.1E-7 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS09120 96101685bdc205da693879bbcbe77282 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 86 97 2.1E-7 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS25750 0aceb4d61d3bb857b2255cab557876a5 329 Gene3D G3DSA:3.40.190.10 28 130 3.0E-14 T 28-03-2018 AM393_RS25750 0aceb4d61d3bb857b2255cab557876a5 329 Gene3D G3DSA:3.40.190.10 131 328 4.0E-20 T 28-03-2018 AM393_RS25750 0aceb4d61d3bb857b2255cab557876a5 329 Pfam PF09084 NMT1/THI5 like 43 245 5.7E-24 T 28-03-2018 IPR015168 SsuA/THI5-like AM393_RS25750 0aceb4d61d3bb857b2255cab557876a5 329 SUPERFAMILY SSF53850 37 244 6.04E-21 T 28-03-2018 AM393_RS18545 c6376a8332e3634e3a9b848dd07a453e 182 SUPERFAMILY SSF47598 1 35 2.67E-13 T 28-03-2018 IPR010985 Ribbon-helix-helix GO:0006355 AM393_RS18545 c6376a8332e3634e3a9b848dd07a453e 182 Pfam PF03925 SeqA protein C-terminal domain 72 180 1.5E-49 T 28-03-2018 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 AM393_RS18545 c6376a8332e3634e3a9b848dd07a453e 182 PIRSF PIRSF019401 1 182 8.1E-50 T 28-03-2018 IPR005621 Negative modulator of initiation of replication SeqA GO:0003677|GO:0032297 AM393_RS18545 c6376a8332e3634e3a9b848dd07a453e 182 Pfam PF17206 SeqA protein N-terminal domain 1 35 1.8E-23 T 28-03-2018 IPR033761 Negative modulator of initiation of replication SeqA, N-terminal AM393_RS18545 c6376a8332e3634e3a9b848dd07a453e 182 Gene3D G3DSA:1.20.1380.10 76 178 2.8E-43 T 28-03-2018 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 AM393_RS18545 c6376a8332e3634e3a9b848dd07a453e 182 Hamap MF_00908 Negative modulator of initiation of replication [seqA]. 1 182 44.387 T 28-03-2018 IPR005621 Negative modulator of initiation of replication SeqA GO:0003677|GO:0032297 AM393_RS18545 c6376a8332e3634e3a9b848dd07a453e 182 Gene3D G3DSA:1.10.1220.10 1 37 1.9E-25 T 28-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 AM393_RS18545 c6376a8332e3634e3a9b848dd07a453e 182 SUPERFAMILY SSF82808 67 182 1.57E-48 T 28-03-2018 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 AM393_RS04675 d68c4acb80719d36da706db64c735f00 282 Gene3D G3DSA:1.10.3470.10 4 272 1.6E-28 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AM393_RS04675 d68c4acb80719d36da706db64c735f00 282 SUPERFAMILY SSF81345 3 261 2.48E-38 T 28-03-2018 IPR029022 ABC transporter, BtuC-like AM393_RS04675 d68c4acb80719d36da706db64c735f00 282 Pfam PF00950 ABC 3 transport family 10 264 6.5E-83 T 28-03-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 AM393_RS09880 74b79a2d4c11e2c6904509adbc306f60 571 Pfam PF05170 AsmA family 249 540 4.2E-17 T 28-03-2018 IPR007844 AsmA AM393_RS15435 9729903eafb70f40ccaa407c3f24d37d 137 Gene3D G3DSA:3.30.160.20 1 137 1.1E-38 T 28-03-2018 AM393_RS15435 9729903eafb70f40ccaa407c3f24d37d 137 SUPERFAMILY SSF75620 8 108 3.41E-11 T 28-03-2018 AM393_RS15435 9729903eafb70f40ccaa407c3f24d37d 137 Pfam PF00472 RF-1 domain 8 132 9.4E-23 T 28-03-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AM393_RS15435 9729903eafb70f40ccaa407c3f24d37d 137 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 21 37 - T 28-03-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AM393_RS22890 d3526fd3fd14eef3e86dba25739ebd0c 548 Pfam PF05683 Fumarase C-terminus 332 537 2.6E-92 T 28-03-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 AM393_RS22890 d3526fd3fd14eef3e86dba25739ebd0c 548 Pfam PF05681 Fumarate hydratase (Fumerase) 51 326 1.4E-85 T 28-03-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 AM393_RS22890 d3526fd3fd14eef3e86dba25739ebd0c 548 PIRSF PIRSF001394 30 548 1.1E-230 T 28-03-2018 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384 AM393_RS22890 d3526fd3fd14eef3e86dba25739ebd0c 548 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 74 325 2.1E-30 T 28-03-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 AM393_RS22890 d3526fd3fd14eef3e86dba25739ebd0c 548 SUPERFAMILY SSF117457 362 536 6.28E-61 T 28-03-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 AM393_RS22890 d3526fd3fd14eef3e86dba25739ebd0c 548 Gene3D G3DSA:3.20.130.10 359 536 4.6E-68 T 28-03-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 AM393_RS22890 d3526fd3fd14eef3e86dba25739ebd0c 548 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 373 537 7.1E-63 T 28-03-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 AM393_RS28570 eabbf68070b66583e80928a698fc6591 96 Gene3D G3DSA:3.30.460.10 4 96 2.8E-16 T 28-03-2018 AM393_RS28570 eabbf68070b66583e80928a698fc6591 96 SUPERFAMILY SSF81301 3 96 6.95E-18 T 28-03-2018 AM393_RS28570 eabbf68070b66583e80928a698fc6591 96 Pfam PF01909 Nucleotidyltransferase domain 27 91 1.5E-6 T 28-03-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 AM393_RS18105 7a07566f53cde5661cef274745aebd56 342 Pfam PF01008 Initiation factor 2 subunit family 48 329 1.2E-68 T 28-03-2018 IPR000649 Initiation factor 2B-related GO:0044237 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174 AM393_RS18105 7a07566f53cde5661cef274745aebd56 342 TIGRFAM TIGR00512 salvage_mtnA: S-methyl-5-thioribose-1-phosphate isomerase 8 328 2.5E-122 T 28-03-2018 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 AM393_RS18105 7a07566f53cde5661cef274745aebd56 342 Hamap MF_01678 Putative methylthioribose-1-phosphate isomerase [mtnA]. 5 339 36.297 T 28-03-2018 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 AM393_RS18105 7a07566f53cde5661cef274745aebd56 342 Gene3D G3DSA:3.40.50.10470 131 336 8.1E-67 T 28-03-2018 AM393_RS18105 7a07566f53cde5661cef274745aebd56 342 TIGRFAM TIGR00524 eIF-2B_rel: eIF-2B alpha/beta/delta-related uncharacterized proteins 39 329 3.8E-93 T 28-03-2018 IPR011559 Initiation factor 2B alpha/beta/delta GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 AM393_RS18105 7a07566f53cde5661cef274745aebd56 342 SUPERFAMILY SSF100950 8 332 8.37E-107 T 28-03-2018 AM393_RS18105 7a07566f53cde5661cef274745aebd56 342 Gene3D G3DSA:1.20.120.420 2 130 3.4E-32 T 28-03-2018 IPR027363 Methylthioribose-1-phosphate isomerase-like, N-terminal domain KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174 AM393_RS03170 d8ed13ab0c86d459bf7616bd342ab926 291 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 2 275 5.7E-112 T 28-03-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 AM393_RS03170 d8ed13ab0c86d459bf7616bd342ab926 291 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 81 275 8.6E-15 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS03170 d8ed13ab0c86d459bf7616bd342ab926 291 SUPERFAMILY SSF161098 16 268 2.09E-50 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS03170 d8ed13ab0c86d459bf7616bd342ab926 291 Gene3D G3DSA:1.10.3720.10 18 283 3.9E-37 T 28-03-2018 AM393_RS03170 d8ed13ab0c86d459bf7616bd342ab926 291 TIGRFAM TIGR02140 permease_CysW: sulfate ABC transporter, permease protein CysW 19 276 2.2E-110 T 28-03-2018 IPR011866 Sulphate ABC transporter, permease protein CysW GO:0008272|GO:0015116|GO:0016021 AM393_RS27590 1167129a794677e510c947b51dfedcd3 115 Pfam PF05717 IS66 Orf2 like protein 9 106 1.4E-38 T 28-03-2018 IPR008878 Transposase IS66, Orf2 AM393_RS27855 1167129a794677e510c947b51dfedcd3 115 Pfam PF05717 IS66 Orf2 like protein 9 106 1.4E-38 T 28-03-2018 IPR008878 Transposase IS66, Orf2 AM393_RS01205 1167129a794677e510c947b51dfedcd3 115 Pfam PF05717 IS66 Orf2 like protein 9 106 1.4E-38 T 28-03-2018 IPR008878 Transposase IS66, Orf2 AM393_RS10460 ae9f0fdb7c3a0a170a362c910ea15b0e 241 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 13 221 8.3E-73 T 28-03-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 AM393_RS10460 ae9f0fdb7c3a0a170a362c910ea15b0e 241 SUPERFAMILY SSF109755 13 229 3.14E-70 T 28-03-2018 AM393_RS10460 ae9f0fdb7c3a0a170a362c910ea15b0e 241 Pfam PF01895 PhoU domain 27 111 2.9E-21 T 28-03-2018 IPR026022 PhoU domain AM393_RS10460 ae9f0fdb7c3a0a170a362c910ea15b0e 241 Pfam PF01895 PhoU domain 128 213 2.0E-17 T 28-03-2018 IPR026022 PhoU domain AM393_RS10460 ae9f0fdb7c3a0a170a362c910ea15b0e 241 Gene3D G3DSA:1.20.58.220 6 119 6.5E-28 T 28-03-2018 AM393_RS10460 ae9f0fdb7c3a0a170a362c910ea15b0e 241 PIRSF PIRSF003107 7 226 4.5E-67 T 28-03-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 AM393_RS10460 ae9f0fdb7c3a0a170a362c910ea15b0e 241 Gene3D G3DSA:1.20.58.220 120 238 7.5E-26 T 28-03-2018 AM393_RS23130 e288bcfa8f3a2fd2747a4e9cc774bdae 266 Gene3D G3DSA:3.90.226.10 10 262 8.2E-27 T 28-03-2018 AM393_RS23130 e288bcfa8f3a2fd2747a4e9cc774bdae 266 Pfam PF06833 Malonate decarboxylase gamma subunit (MdcE) 11 266 2.7E-102 T 28-03-2018 AM393_RS23130 e288bcfa8f3a2fd2747a4e9cc774bdae 266 SUPERFAMILY SSF52096 23 225 4.39E-21 T 28-03-2018 IPR029045 ClpP/crotonase-like domain AM393_RS23130 e288bcfa8f3a2fd2747a4e9cc774bdae 266 TIGRFAM TIGR03134 malonate_gamma: biotin-independent malonate decarboxylase, gamma subunit 10 266 2.2E-94 T 28-03-2018 IPR009648 Biotin-dependent malonate decarboxylase, gamma subunit GO:0044262 MetaCyc: PWY-6060 AM393_RS06965 539ac91c446bc24c44a6e84e08160bb9 104 ProDom PD070929 HDEB PRECURSOR SIGNAL EXPORTED PERIPLASMIC SECRETED ECS4389 10K-L SEQUENCING DIRECT 29 94 7.0E-10 T 28-03-2018 AM393_RS06965 539ac91c446bc24c44a6e84e08160bb9 104 Gene3D G3DSA:1.10.890.10 21 92 1.0E-9 T 28-03-2018 AM393_RS06965 539ac91c446bc24c44a6e84e08160bb9 104 Pfam PF06411 HdeA/HdeB family 4 86 1.9E-9 T 28-03-2018 IPR010486 HNS-dependent expression A/B AM393_RS07755 80b10e659fea11e800f10fd7d37b17fe 234 Pfam PF04131 Putative N-acetylmannosamine-6-phosphate epimerase 35 225 1.7E-84 T 28-03-2018 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9 AM393_RS07755 80b10e659fea11e800f10fd7d37b17fe 234 Gene3D G3DSA:3.20.20.70 1 229 2.9E-42 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM393_RS07755 80b10e659fea11e800f10fd7d37b17fe 234 Hamap MF_01235 Putative N-acetylmannosamine-6-phosphate 2-epimerase [nanE]. 9 225 36.864 T 28-03-2018 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9 AM393_RS07755 80b10e659fea11e800f10fd7d37b17fe 234 SUPERFAMILY SSF51366 14 224 1.91E-53 T 28-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AM393_RS23545 522e4627d0357372881924ec46df9be4 411 Pfam PF07005 Putative sugar-binding N-terminal domain 9 221 5.4E-51 T 28-03-2018 IPR010737 Putative sugar-binding, N-terminal domain AM393_RS23545 522e4627d0357372881924ec46df9be4 411 SUPERFAMILY SSF142764 9 405 7.72E-88 T 28-03-2018 AM393_RS23545 522e4627d0357372881924ec46df9be4 411 Gene3D G3DSA:3.40.50.10840 7 229 2.2E-56 T 28-03-2018 IPR010737 Putative sugar-binding, N-terminal domain AM393_RS23545 522e4627d0357372881924ec46df9be4 411 Pfam PF17042 Putative nucleotide-binding of sugar-metabolising enzyme 235 398 7.3E-33 T 28-03-2018 IPR031475 Putative nucleotide-binding C-terminal domain AM393_RS18085 d5e45db791fed69b06d1b1180db11113 332 Pfam PF02653 Branched-chain amino acid transport system / permease component 49 322 8.0E-36 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AM393_RS18085 d5e45db791fed69b06d1b1180db11113 332 Gene3D G3DSA:1.10.3470.10 44 331 1.2E-28 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AM393_RS05720 95336fcfafbe859c0970dd80ba5da975 90 Gene3D G3DSA:3.40.630.30 3 90 1.5E-14 T 28-03-2018 AM393_RS05720 95336fcfafbe859c0970dd80ba5da975 90 Pfam PF14542 GCN5-related N-acetyl-transferase 9 88 4.8E-21 T 28-03-2018 IPR031165 Yjdj-type Gcn5-related N-acetyltransferase AM393_RS05720 95336fcfafbe859c0970dd80ba5da975 90 SUPERFAMILY SSF55729 4 88 7.83E-22 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM393_RS16145 bb06ea58c66a2c5cec052ac7574c3e94 94 SUPERFAMILY SSF51182 1 94 5.61E-36 T 28-03-2018 IPR011051 RmlC-like cupin domain AM393_RS16145 bb06ea58c66a2c5cec052ac7574c3e94 94 Pfam PF06865 Protein of unknown function (DUF1255) 3 93 5.5E-37 T 28-03-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase AM393_RS16145 bb06ea58c66a2c5cec052ac7574c3e94 94 Gene3D G3DSA:2.60.120.10 3 93 2.8E-38 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AM393_RS16145 bb06ea58c66a2c5cec052ac7574c3e94 94 Hamap MF_01537 UPF0345 protein YaiE [yaiE]. 1 94 27.39 T 28-03-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase AM393_RS19675 9c1d6c6b9b79ecf5d694f1feda6b9ef8 95 Pfam PF07214 Protein of unknown function (DUF1418) 1 92 9.4E-32 T 28-03-2018 IPR010815 Protein of unknown function DUF1418 AM393_RS08070 2cef6dffd284261067b7c7741f97d9b7 408 SUPERFAMILY SSF56349 104 377 9.42E-42 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AM393_RS08070 2cef6dffd284261067b7c7741f97d9b7 408 Pfam PF00589 Phage integrase family 213 373 8.9E-17 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM393_RS08070 2cef6dffd284261067b7c7741f97d9b7 408 Pfam PF13356 Arm DNA-binding domain 8 92 6.7E-15 T 28-03-2018 IPR025166 Integrase, DNA-binding domain AM393_RS08070 2cef6dffd284261067b7c7741f97d9b7 408 Gene3D G3DSA:1.10.443.10 206 388 1.2E-21 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM393_RS08070 2cef6dffd284261067b7c7741f97d9b7 408 Gene3D G3DSA:1.10.150.130 104 185 2.1E-12 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal AM393_RS07930 3c8ff76c081b7d643040d341d7dc7b13 80 Pfam PF06196 Protein of unknown function (DUF997) 7 77 7.4E-29 T 28-03-2018 IPR010398 Protein of unknown function DUF997 AM393_RS07930 3c8ff76c081b7d643040d341d7dc7b13 80 ProDom PD745092 MEMBRANE YHDT SODIUM/PANTOTHENATE TRANSMEMBRANE INNER SYMPORTER Y0210 INTEGRAL PROTEIN-LIKE PM1090 1 79 5.0E-16 T 28-03-2018 IPR010398 Protein of unknown function DUF997 AM393_RS15740 0256c94525a6cd294eca20680662838a 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 198 1.8E-35 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS15740 0256c94525a6cd294eca20680662838a 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 179 1.8E-35 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS15740 0256c94525a6cd294eca20680662838a 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 1.8E-35 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS15740 0256c94525a6cd294eca20680662838a 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 1.8E-35 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS15740 0256c94525a6cd294eca20680662838a 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.8E-35 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS15740 0256c94525a6cd294eca20680662838a 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 1.8E-35 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS15740 0256c94525a6cd294eca20680662838a 253 Gene3D G3DSA:3.40.50.720 45 253 8.4E-56 T 28-03-2018 AM393_RS15740 0256c94525a6cd294eca20680662838a 253 Gene3D G3DSA:3.40.50.720 1 44 1.2E-7 T 28-03-2018 AM393_RS15740 0256c94525a6cd294eca20680662838a 253 SUPERFAMILY SSF51735 7 252 1.69E-71 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS15740 0256c94525a6cd294eca20680662838a 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 160 179 4.9E-13 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS15740 0256c94525a6cd294eca20680662838a 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 4.9E-13 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS15740 0256c94525a6cd294eca20680662838a 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 139 147 4.9E-13 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS15740 0256c94525a6cd294eca20680662838a 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 250 3.3E-54 T 28-03-2018 AM393_RS05875 e780d88a1b12f19c13e52d7d1bf358f5 88 Pfam PF03937 Flavinator of succinate dehydrogenase 6 76 4.9E-25 T 28-03-2018 IPR005631 Flavinator of succinate dehydrogenase AM393_RS05875 e780d88a1b12f19c13e52d7d1bf358f5 88 SUPERFAMILY SSF109910 1 78 4.84E-26 T 28-03-2018 IPR005631 Flavinator of succinate dehydrogenase AM393_RS05875 e780d88a1b12f19c13e52d7d1bf358f5 88 Gene3D G3DSA:1.10.150.250 1 85 9.4E-26 T 28-03-2018 AM393_RS13320 b9765566b760f45de2221a2d5ba84361 500 Pfam PF05872 Bacterial protein of unknown function (DUF853) 6 500 2.3E-248 T 28-03-2018 IPR033186 Helicase HerA-like C-terminal AM393_RS13320 b9765566b760f45de2221a2d5ba84361 500 SUPERFAMILY SSF52540 9 369 1.27E-54 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS13320 b9765566b760f45de2221a2d5ba84361 500 Gene3D G3DSA:3.40.50.300 10 432 2.0E-29 T 28-03-2018 AM393_RS11730 302805e3a21a31756b2c9c7665b33e77 105 PIRSF PIRSF000699 1 104 1.1E-31 T 28-03-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 AM393_RS11730 302805e3a21a31756b2c9c7665b33e77 105 Gene3D G3DSA:1.20.58.80 2 100 3.2E-33 T 28-03-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 AM393_RS11730 302805e3a21a31756b2c9c7665b33e77 105 SUPERFAMILY SSF46973 1 100 2.22E-33 T 28-03-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 AM393_RS11730 302805e3a21a31756b2c9c7665b33e77 105 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 7 99 2.3E-31 T 28-03-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 AM393_RS15255 ff8416c87375e6d0da46365214144c18 472 PRINTS PR00762 Chloride channel signature 102 119 2.3E-28 T 28-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AM393_RS15255 ff8416c87375e6d0da46365214144c18 472 PRINTS PR00762 Chloride channel signature 352 372 2.3E-28 T 28-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AM393_RS15255 ff8416c87375e6d0da46365214144c18 472 PRINTS PR00762 Chloride channel signature 183 202 2.3E-28 T 28-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AM393_RS15255 ff8416c87375e6d0da46365214144c18 472 PRINTS PR00762 Chloride channel signature 387 403 2.3E-28 T 28-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AM393_RS15255 ff8416c87375e6d0da46365214144c18 472 PRINTS PR00762 Chloride channel signature 405 424 2.3E-28 T 28-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AM393_RS15255 ff8416c87375e6d0da46365214144c18 472 Gene3D G3DSA:1.10.3080.10 16 461 7.9E-107 T 28-03-2018 IPR014743 Chloride channel, core GO:0005216|GO:0055085 Reactome: R-HSA-2672351 AM393_RS15255 ff8416c87375e6d0da46365214144c18 472 Pfam PF00654 Voltage gated chloride channel 89 437 6.0E-90 T 28-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AM393_RS15255 ff8416c87375e6d0da46365214144c18 472 Hamap MF_01128 H(+)/Cl(-) exchange transporter ClcA [clcA]. 3 469 51.737 T 28-03-2018 IPR023861 Chloride channel, ClcA GO:0005887|GO:0006821|GO:0015108 AM393_RS15255 ff8416c87375e6d0da46365214144c18 472 SUPERFAMILY SSF81340 22 453 8.5E-111 T 28-03-2018 IPR014743 Chloride channel, core GO:0005216|GO:0055085 Reactome: R-HSA-2672351 AM393_RS04840 85e7e50fa1d022e505d66580cdc7fe07 201 Gene3D G3DSA:3.40.50.300 23 201 1.7E-50 T 28-03-2018 AM393_RS04840 85e7e50fa1d022e505d66580cdc7fe07 201 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 26 197 38.926 T 28-03-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 AM393_RS04840 85e7e50fa1d022e505d66580cdc7fe07 201 Pfam PF01583 Adenylylsulphate kinase 27 179 1.1E-73 T 28-03-2018 AM393_RS04840 85e7e50fa1d022e505d66580cdc7fe07 201 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 10 193 1.6E-89 T 28-03-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 AM393_RS04840 85e7e50fa1d022e505d66580cdc7fe07 201 SUPERFAMILY SSF52540 23 194 5.15E-37 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS11540 4b3e0e0d2da9c4d6320248b5a73c7db5 178 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 1.2E-32 T 28-03-2018 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 AM393_RS11540 4b3e0e0d2da9c4d6320248b5a73c7db5 178 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 1.2E-32 T 28-03-2018 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 AM393_RS11540 4b3e0e0d2da9c4d6320248b5a73c7db5 178 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 1.2E-32 T 28-03-2018 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 AM393_RS11540 4b3e0e0d2da9c4d6320248b5a73c7db5 178 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 153 18.698 T 28-03-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 AM393_RS11540 4b3e0e0d2da9c4d6320248b5a73c7db5 178 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 80 1.0E-31 T 28-03-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 AM393_RS22380 fb28c412587a0fa9dfa2c6370b0a0639 1141 Pfam PF06761 Intracellular multiplication and human macrophage-killing 416 733 2.6E-69 T 28-03-2018 IPR009612 ImcF-related AM393_RS22380 fb28c412587a0fa9dfa2c6370b0a0639 1141 Pfam PF06744 Type VI secretion protein IcmF C-terminal 867 1064 1.2E-53 T 28-03-2018 IPR010623 Type VI secretion system IcmF, C-terminal AM393_RS16830 41974368e577c276d0bf404c98d241cc 260 Pfam PF03649 Uncharacterised protein family (UPF0014) 10 245 5.6E-82 T 28-03-2018 IPR005226 UPF0014 family AM393_RS16830 41974368e577c276d0bf404c98d241cc 260 TIGRFAM TIGR00245 TIGR00245: TIGR00245 family protein 6 251 1.1E-106 T 28-03-2018 IPR005226 UPF0014 family AM393_RS07270 afc8bfb192e364ad4ab83207fc21052e 154 Pfam PF12869 tRNA_anti-like 1 151 3.4E-36 T 28-03-2018 IPR024422 Protein of unknown function, OB-fold-containing AM393_RS19230 f656d5cb3c6bec02c590ef939a50fe63 170 Pfam PF13505 Outer membrane protein beta-barrel domain 11 170 8.1E-25 T 28-03-2018 IPR027385 Outer membrane protein beta-barrel AM393_RS19230 f656d5cb3c6bec02c590ef939a50fe63 170 ProSitePatterns PS00695 Enterobacterial virulence outer membrane protein signature 2. 162 170 - T 28-03-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 AM393_RS19230 f656d5cb3c6bec02c590ef939a50fe63 170 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 131 152 1.2E-39 T 28-03-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 AM393_RS19230 f656d5cb3c6bec02c590ef939a50fe63 170 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 46 58 1.2E-39 T 28-03-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 AM393_RS19230 f656d5cb3c6bec02c590ef939a50fe63 170 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 158 169 1.2E-39 T 28-03-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 AM393_RS19230 f656d5cb3c6bec02c590ef939a50fe63 170 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 85 108 1.2E-39 T 28-03-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 AM393_RS19230 f656d5cb3c6bec02c590ef939a50fe63 170 SUPERFAMILY SSF56925 28 170 8.11E-31 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AM393_RS19230 f656d5cb3c6bec02c590ef939a50fe63 170 ProSitePatterns PS00694 Enterobacterial virulence outer membrane protein signature 1. 47 55 - T 28-03-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 AM393_RS19230 f656d5cb3c6bec02c590ef939a50fe63 170 Gene3D G3DSA:2.40.160.20 23 170 2.5E-21 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AM393_RS07480 2763cfa96ad29615b25907a60ccd2c44 314 Gene3D G3DSA:3.30.2350.10 10 228 4.9E-79 T 28-03-2018 AM393_RS07480 2763cfa96ad29615b25907a60ccd2c44 314 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 11 309 18.673 T 28-03-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM393_RS07480 2763cfa96ad29615b25907a60ccd2c44 314 Gene3D G3DSA:2.30.130.10 250 313 7.4E-15 T 28-03-2018 IPR002478 PUA domain GO:0003723 AM393_RS07480 2763cfa96ad29615b25907a60ccd2c44 314 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 12 219 5.6E-92 T 28-03-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM393_RS07480 2763cfa96ad29615b25907a60ccd2c44 314 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 33 180 2.0E-56 T 28-03-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 AM393_RS07480 2763cfa96ad29615b25907a60ccd2c44 314 SUPERFAMILY SSF88697 251 310 1.59E-14 T 28-03-2018 IPR015947 PUA-like domain AM393_RS07480 2763cfa96ad29615b25907a60ccd2c44 314 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 181 247 6.1E-22 T 28-03-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 AM393_RS07480 2763cfa96ad29615b25907a60ccd2c44 314 SUPERFAMILY SSF55120 11 246 5.18E-83 T 28-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM393_RS07480 2763cfa96ad29615b25907a60ccd2c44 314 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 252 309 2.4E-19 T 28-03-2018 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM393_RS08810 a4003483a45fa3b5ddf51d4d82b8f1ab 106 Pfam PF10956 Protein of unknown function (DUF2756) 1 102 9.2E-48 T 28-03-2018 IPR020158 Protein of unknown function DUF2756 AM393_RS20165 2b16a317aebc0f5fb786bf066a3bdc7d 701 SUPERFAMILY SSF53335 394 697 1.83E-67 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM393_RS20165 2b16a317aebc0f5fb786bf066a3bdc7d 701 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 195 206 - T 28-03-2018 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AM393_RS20165 2b16a317aebc0f5fb786bf066a3bdc7d 701 SUPERFAMILY SSF53335 258 373 1.32E-39 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM393_RS20165 2b16a317aebc0f5fb786bf066a3bdc7d 701 SUPERFAMILY SSF53335 146 217 1.32E-39 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM393_RS20165 2b16a317aebc0f5fb786bf066a3bdc7d 701 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 456 657 4.5E-22 T 28-03-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 AM393_RS20165 2b16a317aebc0f5fb786bf066a3bdc7d 701 Gene3D G3DSA:3.30.750.80 389 490 4.9E-9 T 28-03-2018 AM393_RS20165 2b16a317aebc0f5fb786bf066a3bdc7d 701 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 306 312 - T 28-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AM393_RS20165 2b16a317aebc0f5fb786bf066a3bdc7d 701 Pfam PF01170 Putative RNA methylase family UPF0020 162 375 4.1E-64 T 28-03-2018 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AM393_RS20165 2b16a317aebc0f5fb786bf066a3bdc7d 701 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 303 315 3.0E-5 T 28-03-2018 AM393_RS20165 2b16a317aebc0f5fb786bf066a3bdc7d 701 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 193 207 3.0E-5 T 28-03-2018 AM393_RS20165 2b16a317aebc0f5fb786bf066a3bdc7d 701 Pfam PF02926 THUMP domain 23 153 1.1E-17 T 28-03-2018 IPR004114 THUMP domain GO:0003723 AM393_RS20165 2b16a317aebc0f5fb786bf066a3bdc7d 701 SMART SM00981 56 154 5.0E-19 T 28-03-2018 IPR004114 THUMP domain GO:0003723 AM393_RS20165 2b16a317aebc0f5fb786bf066a3bdc7d 701 Hamap MF_01858 Ribosomal RNA large subunit methyltransferase K/L [rlmL]. 4 701 32.747 T 28-03-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AM393_RS20165 2b16a317aebc0f5fb786bf066a3bdc7d 701 Gene3D G3DSA:3.40.50.150 491 701 9.0E-41 T 28-03-2018 AM393_RS20165 2b16a317aebc0f5fb786bf066a3bdc7d 701 Gene3D G3DSA:3.40.50.150 139 383 6.6E-33 T 28-03-2018 AM393_RS20165 2b16a317aebc0f5fb786bf066a3bdc7d 701 PIRSF PIRSF037618 1 701 4.4E-296 T 28-03-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AM393_RS06460 d95485aac21fe311c0dfd35a2e0589c7 105 Pfam PF09686 Plasmid protein of unknown function (Plasmid_RAQPRD) 23 99 2.2E-26 T 28-03-2018 IPR019110 Uncharacterised protein family, RAQPRD AM393_RS06460 d95485aac21fe311c0dfd35a2e0589c7 105 TIGRFAM TIGR01690 ICE_RAQPRD: integrative conjugative element protein, RAQPRD family 12 101 8.4E-29 T 28-03-2018 IPR019110 Uncharacterised protein family, RAQPRD AM393_RS11510 fa37e097d2b1655e9580504236c1513c 253 TIGRFAM TIGR01718 Uridine-psphlse: uridine phosphorylase 6 253 1.1E-129 T 28-03-2018 IPR010058 Uridine phosphorylase GO:0004850|GO:0005737|GO:0009166 KEGG: 00240+2.4.2.3|KEGG: 00983+2.4.2.3|MetaCyc: PWY-5532 AM393_RS11510 fa37e097d2b1655e9580504236c1513c 253 Gene3D G3DSA:3.40.50.1580 3 253 8.8E-56 T 28-03-2018 AM393_RS11510 fa37e097d2b1655e9580504236c1513c 253 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 66 81 - T 28-03-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 AM393_RS11510 fa37e097d2b1655e9580504236c1513c 253 SUPERFAMILY SSF53167 6 250 1.44E-72 T 28-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AM393_RS11510 fa37e097d2b1655e9580504236c1513c 253 Pfam PF01048 Phosphorylase superfamily 21 245 1.4E-39 T 28-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AM393_RS24985 e55bb494ade288315381accafe3c0cc3 427 Gene3D G3DSA:1.20.1250.20 186 403 1.8E-14 T 28-03-2018 AM393_RS24985 e55bb494ade288315381accafe3c0cc3 427 SUPERFAMILY SSF103473 3 397 2.75E-29 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS24985 e55bb494ade288315381accafe3c0cc3 427 Gene3D G3DSA:1.20.1250.20 1 176 1.9E-12 T 28-03-2018 AM393_RS24985 e55bb494ade288315381accafe3c0cc3 427 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 1 408 2.4E-111 T 28-03-2018 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 AM393_RS24985 e55bb494ade288315381accafe3c0cc3 427 Pfam PF13347 MFS/sugar transport protein 1 398 6.1E-86 T 28-03-2018 AM393_RS11490 5a5ea5764d9680dcae2a8dbf62a3faed 299 TIGRFAM TIGR00950 2A78: carboxylate/amino acid/amine transporter 11 273 5.6E-85 T 28-03-2018 IPR004779 Carboxylate/Amino Acid/Amine Transporter GO:0016021 AM393_RS11490 5a5ea5764d9680dcae2a8dbf62a3faed 299 SUPERFAMILY SSF103481 35 131 2.75E-8 T 28-03-2018 AM393_RS11490 5a5ea5764d9680dcae2a8dbf62a3faed 299 Pfam PF00892 EamA-like transporter family 139 275 7.0E-11 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM393_RS11490 5a5ea5764d9680dcae2a8dbf62a3faed 299 Pfam PF00892 EamA-like transporter family 2 129 4.0E-9 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM393_RS11490 5a5ea5764d9680dcae2a8dbf62a3faed 299 SUPERFAMILY SSF103481 198 278 6.8E-10 T 28-03-2018 AM393_RS17900 e94b1b485c8f85ffa177f957aeb010bd 418 Gene3D G3DSA:2.30.30.60 199 249 7.1E-10 T 28-03-2018 AM393_RS17900 e94b1b485c8f85ffa177f957aeb010bd 418 Pfam PF00924 Mechanosensitive ion channel 140 284 8.7E-31 T 28-03-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AM393_RS17900 e94b1b485c8f85ffa177f957aeb010bd 418 Pfam PF00924 Mechanosensitive ion channel 317 387 2.7E-5 T 28-03-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AM393_RS17900 e94b1b485c8f85ffa177f957aeb010bd 418 SUPERFAMILY SSF50182 183 249 9.81E-11 T 28-03-2018 IPR010920 LSM domain AM393_RS18235 ee38adda234e62af4efc97aaea2a8683 142 Gene3D G3DSA:3.40.50.620 2 142 2.6E-27 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM393_RS18235 ee38adda234e62af4efc97aaea2a8683 142 PRINTS PR01438 Universal stress protein signature 2 20 7.7E-15 T 28-03-2018 IPR006015 Universal stress protein A AM393_RS18235 ee38adda234e62af4efc97aaea2a8683 142 PRINTS PR01438 Universal stress protein signature 103 115 7.7E-15 T 28-03-2018 IPR006015 Universal stress protein A AM393_RS18235 ee38adda234e62af4efc97aaea2a8683 142 PRINTS PR01438 Universal stress protein signature 120 142 7.7E-15 T 28-03-2018 IPR006015 Universal stress protein A AM393_RS18235 ee38adda234e62af4efc97aaea2a8683 142 Pfam PF00582 Universal stress protein family 1 142 1.6E-26 T 28-03-2018 IPR006016 UspA GO:0006950 AM393_RS18235 ee38adda234e62af4efc97aaea2a8683 142 SUPERFAMILY SSF52402 1 142 9.21E-27 T 28-03-2018 AM393_RS06395 770be24efbe87b092baf2da26be7b9ac 169 Pfam PF10554 Ash protein family 11 80 1.1E-4 T 28-03-2018 IPR018880 Bacteriophage P4, Ash protein AM393_RS06395 770be24efbe87b092baf2da26be7b9ac 169 Pfam PF08845 Toxin SymE, type I toxin-antitoxin system 91 140 2.3E-15 T 28-03-2018 IPR014944 Toxin SymE-like GO:0003723|GO:0005737|GO:0016070|GO:0016788 AM393_RS06655 97f3f48787e13c7b40b14e058aaddc4e 95 Pfam PF11115 Protein of unknown function (DUF2623) 1 92 2.3E-46 T 28-03-2018 IPR022574 Protein of unknown function DUF2623 AM393_RS06655 97f3f48787e13c7b40b14e058aaddc4e 95 ProDom PD065638 YGHW CYTOPLASMIC STY3323 1 94 6.0E-41 T 28-03-2018 IPR022574 Protein of unknown function DUF2623 AM393_RS01880 63ffc1e6fd916b52f4e0950380fafd6e 412 Gene3D G3DSA:1.10.287.470 127 189 6.0E-13 T 28-03-2018 AM393_RS01880 63ffc1e6fd916b52f4e0950380fafd6e 412 Pfam PF13437 HlyD family secretion protein 197 298 1.5E-6 T 28-03-2018 AM393_RS01880 63ffc1e6fd916b52f4e0950380fafd6e 412 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 61 389 6.4E-79 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AM393_RS01880 63ffc1e6fd916b52f4e0950380fafd6e 412 Gene3D G3DSA:2.40.50.100 190 373 2.8E-5 T 28-03-2018 AM393_RS01880 63ffc1e6fd916b52f4e0950380fafd6e 412 Hamap MF_01422 Multidrug resistance protein MdtA [mdtA]. 1 410 52.643 T 28-03-2018 IPR022824 Multidrug resistance protein MdtA AM393_RS01880 63ffc1e6fd916b52f4e0950380fafd6e 412 Pfam PF13533 Biotin-lipoyl like 86 134 3.8E-15 T 28-03-2018 AM393_RS01880 63ffc1e6fd916b52f4e0950380fafd6e 412 Gene3D G3DSA:2.40.50.100 53 118 4.3E-8 T 28-03-2018 AM393_RS01880 63ffc1e6fd916b52f4e0950380fafd6e 412 SUPERFAMILY SSF111369 78 312 1.7E-55 T 28-03-2018 AM393_RS26370 76bd6f45279d7edbe353eea29c8b2770 253 SUPERFAMILY SSF52540 3 225 6.18E-63 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS26370 76bd6f45279d7edbe353eea29c8b2770 253 Pfam PF00005 ABC transporter 18 167 2.4E-34 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS26370 76bd6f45279d7edbe353eea29c8b2770 253 SMART SM00382 27 244 7.7E-13 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS26370 76bd6f45279d7edbe353eea29c8b2770 253 Gene3D G3DSA:3.40.50.300 1 240 6.0E-63 T 28-03-2018 AM393_RS04545 d605354981bd6ff0c2237beea018c043 255 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 48 157 2.7E-23 T 28-03-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM393_RS04545 d605354981bd6ff0c2237beea018c043 255 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 131 147 - T 28-03-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM393_RS04545 d605354981bd6ff0c2237beea018c043 255 Gene3D G3DSA:3.40.50.700 36 178 1.6E-26 T 28-03-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM393_RS04545 d605354981bd6ff0c2237beea018c043 255 SUPERFAMILY SSF56770 36 169 5.23E-50 T 28-03-2018 AM393_RS08150 97f1365f14a8ce55d646b3a927c99967 374 Pfam PF02481 DNA recombination-mediator protein A 72 274 1.3E-71 T 28-03-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 AM393_RS08150 97f1365f14a8ce55d646b3a927c99967 374 SUPERFAMILY SSF102405 78 282 5.34E-38 T 28-03-2018 AM393_RS08150 97f1365f14a8ce55d646b3a927c99967 374 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 66 282 1.2E-78 T 28-03-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 AM393_RS08150 97f1365f14a8ce55d646b3a927c99967 374 Gene3D G3DSA:1.10.10.10 268 362 1.1E-7 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS08150 97f1365f14a8ce55d646b3a927c99967 374 Gene3D G3DSA:3.40.50.450 107 251 2.3E-37 T 28-03-2018 AM393_RS22470 52dc8f5ff5f29234b378c2bc3520aa5f 344 Gene3D G3DSA:3.40.50.720 181 259 4.8E-17 T 28-03-2018 AM393_RS22470 52dc8f5ff5f29234b378c2bc3520aa5f 344 SUPERFAMILY SSF50129 2 158 2.74E-32 T 28-03-2018 IPR011032 GroES-like AM393_RS22470 52dc8f5ff5f29234b378c2bc3520aa5f 344 Gene3D G3DSA:3.90.180.10 1 180 2.6E-46 T 28-03-2018 AM393_RS22470 52dc8f5ff5f29234b378c2bc3520aa5f 344 SMART SM00829 15 336 3.0E-12 T 28-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AM393_RS22470 52dc8f5ff5f29234b378c2bc3520aa5f 344 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 173 194 - T 28-03-2018 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 AM393_RS22470 52dc8f5ff5f29234b378c2bc3520aa5f 344 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 33 105 1.0E-8 T 28-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AM393_RS22470 52dc8f5ff5f29234b378c2bc3520aa5f 344 Gene3D G3DSA:3.90.180.10 260 340 4.8E-7 T 28-03-2018 AM393_RS22470 52dc8f5ff5f29234b378c2bc3520aa5f 344 SUPERFAMILY SSF51735 131 303 1.01E-30 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS22470 52dc8f5ff5f29234b378c2bc3520aa5f 344 Pfam PF13602 Zinc-binding dehydrogenase 215 336 1.3E-24 T 28-03-2018 AM393_RS18030 4a457a08519a523feddd1bcee1f6ac4b 535 ProSitePatterns PS00455 Putative AMP-binding domain signature. 186 197 - T 28-03-2018 IPR020845 AMP-binding, conserved site AM393_RS18030 4a457a08519a523feddd1bcee1f6ac4b 535 Pfam PF13193 AMP-binding enzyme C-terminal domain 445 519 1.4E-9 T 28-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain AM393_RS18030 4a457a08519a523feddd1bcee1f6ac4b 535 Gene3D G3DSA:3.40.50.980 23 191 1.5E-24 T 28-03-2018 AM393_RS18030 4a457a08519a523feddd1bcee1f6ac4b 535 Gene3D G3DSA:2.30.38.10 355 430 2.1E-22 T 28-03-2018 AM393_RS18030 4a457a08519a523feddd1bcee1f6ac4b 535 SUPERFAMILY SSF56801 6 531 3.4E-122 T 28-03-2018 AM393_RS18030 4a457a08519a523feddd1bcee1f6ac4b 535 Gene3D G3DSA:3.40.50.980 192 353 1.2E-27 T 28-03-2018 AM393_RS18030 4a457a08519a523feddd1bcee1f6ac4b 535 Pfam PF00501 AMP-binding enzyme 36 436 6.4E-73 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AM393_RS18030 4a457a08519a523feddd1bcee1f6ac4b 535 Gene3D G3DSA:3.30.300.30 431 534 7.4E-22 T 28-03-2018 AM393_RS18030 4a457a08519a523feddd1bcee1f6ac4b 535 TIGRFAM TIGR02275 DHB_AMP_lig: (2,3-dihydroxybenzoyl)adenylate synthase 2 526 1.1E-263 T 28-03-2018 IPR011963 2,3-dihydroxybenzoate-AMP ligase GO:0008668|GO:0019290 AM393_RS13925 6247311a5af0fe9778c6997b064822c4 254 Gene3D G3DSA:2.30.30.370 1 40 9.4E-15 T 28-03-2018 AM393_RS13925 6247311a5af0fe9778c6997b064822c4 254 SUPERFAMILY SSF56529 37 244 3.66E-75 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AM393_RS13925 6247311a5af0fe9778c6997b064822c4 254 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 47 243 1.1E-61 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AM393_RS13925 6247311a5af0fe9778c6997b064822c4 254 Gene3D G3DSA:3.90.850.10 41 253 7.8E-74 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AM393_RS13925 6247311a5af0fe9778c6997b064822c4 254 TIGRFAM TIGR02303 HpaG-C-term: 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, C-terminal subunit 2 245 1.6E-120 T 28-03-2018 IPR012684 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, C-terminal subunit GO:0008704|GO:0018800|GO:1901023 KEGG: 00350+5.3.3.10+4.1.1.68 AM393_RS21895 4300f81314218c847c00f130af351fb9 340 TIGRFAM TIGR03082 Gneg_AbrB_dup: membrane protein AbrB duplication 179 332 1.8E-42 T 28-03-2018 IPR017516 AbrB duplication AM393_RS21895 4300f81314218c847c00f130af351fb9 340 TIGRFAM TIGR03082 Gneg_AbrB_dup: membrane protein AbrB duplication 1 154 1.4E-40 T 28-03-2018 IPR017516 AbrB duplication AM393_RS21895 4300f81314218c847c00f130af351fb9 340 Pfam PF05145 Transition state regulatory protein AbrB 23 333 1.7E-96 T 28-03-2018 IPR007820 AbrB family GO:0010468|GO:0016021 AM393_RS21895 4300f81314218c847c00f130af351fb9 340 PIRSF PIRSF038991 1 340 2.6E-86 T 28-03-2018 IPR007820 AbrB family GO:0010468|GO:0016021 AM393_RS09705 4ed72cddd04bfd2dc9842c5c3149a9bc 221 SUPERFAMILY SSF47781 17 84 5.56E-9 T 28-03-2018 IPR010994 RuvA domain 2-like AM393_RS09705 4ed72cddd04bfd2dc9842c5c3149a9bc 221 Hamap MF_00018 UPF0758 protein YicR [yicR]. 1 221 52.726 T 28-03-2018 IPR022820 Uncharacterised protein family UPF0758, YicR subfamily AM393_RS09705 4ed72cddd04bfd2dc9842c5c3149a9bc 221 TIGRFAM TIGR00608 radc: DNA repair protein RadC 8 221 8.5E-89 T 28-03-2018 IPR001405 RadC protein AM393_RS09705 4ed72cddd04bfd2dc9842c5c3149a9bc 221 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 170 175 - T 28-03-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site AM393_RS09705 4ed72cddd04bfd2dc9842c5c3149a9bc 221 Pfam PF04002 RadC-like JAB domain 102 219 7.2E-45 T 28-03-2018 IPR025657 RadC-like JAB domain AM393_RS09705 4ed72cddd04bfd2dc9842c5c3149a9bc 221 Gene3D G3DSA:1.10.150.20 25 96 1.7E-5 T 28-03-2018 AM393_RS09705 4ed72cddd04bfd2dc9842c5c3149a9bc 221 Gene3D G3DSA:3.40.140.10 97 221 9.4E-48 T 28-03-2018 AM393_RS09705 4ed72cddd04bfd2dc9842c5c3149a9bc 221 SUPERFAMILY SSF102712 150 186 4.84E-5 T 28-03-2018 AM393_RS21170 c0cde3561e3d92face6349ee2abb0fab 379 SUPERFAMILY SSF53756 60 359 3.56E-38 T 28-03-2018 AM393_RS21170 c0cde3561e3d92face6349ee2abb0fab 379 Gene3D G3DSA:3.40.50.2000 223 379 2.5E-19 T 28-03-2018 AM393_RS21170 c0cde3561e3d92face6349ee2abb0fab 379 Gene3D G3DSA:3.40.50.2000 51 219 8.6E-16 T 28-03-2018 AM393_RS21170 c0cde3561e3d92face6349ee2abb0fab 379 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 135 336 3.5E-12 T 28-03-2018 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 AM393_RS00485 76c6dc4afec158230f088ba978d1263b 456 Pfam PF07690 Major Facilitator Superfamily 22 412 5.4E-51 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS00485 76c6dc4afec158230f088ba978d1263b 456 Gene3D G3DSA:1.20.1250.20 261 455 1.1E-24 T 28-03-2018 AM393_RS00485 76c6dc4afec158230f088ba978d1263b 456 Gene3D G3DSA:1.20.1250.20 13 202 1.4E-27 T 28-03-2018 AM393_RS00485 76c6dc4afec158230f088ba978d1263b 456 SUPERFAMILY SSF103473 251 451 3.27E-64 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS00485 76c6dc4afec158230f088ba978d1263b 456 SUPERFAMILY SSF103473 9 198 3.27E-64 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS00485 76c6dc4afec158230f088ba978d1263b 456 PRINTS PR01036 Tetracycline resistance protein TetB signature 305 329 1.6E-9 T 28-03-2018 AM393_RS00485 76c6dc4afec158230f088ba978d1263b 456 PRINTS PR01036 Tetracycline resistance protein TetB signature 20 44 1.6E-9 T 28-03-2018 AM393_RS00485 76c6dc4afec158230f088ba978d1263b 456 PRINTS PR01036 Tetracycline resistance protein TetB signature 111 131 1.6E-9 T 28-03-2018 AM393_RS00485 76c6dc4afec158230f088ba978d1263b 456 PRINTS PR01036 Tetracycline resistance protein TetB signature 403 422 1.6E-9 T 28-03-2018 AM393_RS00485 76c6dc4afec158230f088ba978d1263b 456 PRINTS PR01036 Tetracycline resistance protein TetB signature 141 165 1.6E-9 T 28-03-2018 AM393_RS09505 ecd30d0fed612d2247fee2048ac874a8 202 SUPERFAMILY SSF47616 76 200 5.97E-15 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like AM393_RS09505 ecd30d0fed612d2247fee2048ac874a8 202 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 72 2.8E-17 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AM393_RS09505 ecd30d0fed612d2247fee2048ac874a8 202 Gene3D G3DSA:3.40.30.10 1 93 2.6E-18 T 28-03-2018 AM393_RS09505 ecd30d0fed612d2247fee2048ac874a8 202 SUPERFAMILY SSF52833 1 100 6.16E-21 T 28-03-2018 IPR012336 Thioredoxin-like fold AM393_RS09505 ecd30d0fed612d2247fee2048ac874a8 202 Gene3D G3DSA:1.20.1050.10 94 202 9.2E-15 T 28-03-2018 AM393_RS09505 ecd30d0fed612d2247fee2048ac874a8 202 Pfam PF00043 Glutathione S-transferase, C-terminal domain 100 191 2.7E-7 T 28-03-2018 IPR004046 Glutathione S-transferase, C-terminal AM393_RS17830 f766fea502c240f93e01a7a8fdd6d891 445 Gene3D G3DSA:3.90.1150.10 5 197 1.3E-43 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM393_RS17830 f766fea502c240f93e01a7a8fdd6d891 445 Gene3D G3DSA:3.40.640.10 198 324 2.9E-41 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM393_RS17830 f766fea502c240f93e01a7a8fdd6d891 445 Gene3D G3DSA:3.90.1150.10 325 445 1.2E-24 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM393_RS17830 f766fea502c240f93e01a7a8fdd6d891 445 Pfam PF00202 Aminotransferase class-III 36 435 2.2E-93 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM393_RS17830 f766fea502c240f93e01a7a8fdd6d891 445 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 250 287 - T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM393_RS17830 f766fea502c240f93e01a7a8fdd6d891 445 SUPERFAMILY SSF53383 13 439 8.06E-117 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM393_RS06875 c0d8f8eff99b06c1082502f842996e16 205 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 7 193 18.298 T 28-03-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 AM393_RS06875 c0d8f8eff99b06c1082502f842996e16 205 SMART SM01207 10 185 1.1E-83 T 28-03-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 AM393_RS06875 c0d8f8eff99b06c1082502f842996e16 205 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 1 194 3.1E-81 T 28-03-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 AM393_RS06875 c0d8f8eff99b06c1082502f842996e16 205 Pfam PF02660 Glycerol-3-phosphate acyltransferase 11 184 6.7E-49 T 28-03-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 AM393_RS03590 1b1b2e9fa55801f2d7d09692bf32f49e 66 Gene3D G3DSA:1.10.10.600 2 64 4.3E-34 T 28-03-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 AM393_RS03590 1b1b2e9fa55801f2d7d09692bf32f49e 66 PIRSF PIRSF039003 3 66 5.7E-33 T 28-03-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 AM393_RS03590 1b1b2e9fa55801f2d7d09692bf32f49e 66 SUPERFAMILY SSF140319 3 64 5.36E-27 T 28-03-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 AM393_RS03590 1b1b2e9fa55801f2d7d09692bf32f49e 66 Pfam PF04384 Iron-sulphur cluster assembly 3 66 1.6E-32 T 28-03-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 AM393_RS03590 1b1b2e9fa55801f2d7d09692bf32f49e 66 TIGRFAM TIGR03412 iscX_yfhJ: FeS assembly protein IscX 4 66 1.3E-32 T 28-03-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 AM393_RS23370 26442858ab67e627edce74593ac8d25a 206 SUPERFAMILY SSF53639 1 205 4.71E-60 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal AM393_RS23370 26442858ab67e627edce74593ac8d25a 206 Gene3D G3DSA:3.40.225.10 2 191 7.5E-50 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal AM393_RS23370 26442858ab67e627edce74593ac8d25a 206 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 8 185 3.7E-42 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal AM393_RS23370 26442858ab67e627edce74593ac8d25a 206 SMART SM01007 8 187 1.9E-56 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal AM393_RS08125 67d15acb89b3a00898f143d5ee3c5aa6 85 Pfam PF07369 Protein of unknown function (DUF1488) 5 84 1.1E-31 T 28-03-2018 IPR009962 Protein of unknown function DUF1488 AM393_RS08125 67d15acb89b3a00898f143d5ee3c5aa6 85 Gene3D G3DSA:3.30.160.140 5 83 5.4E-34 T 28-03-2018 IPR009962 Protein of unknown function DUF1488 AM393_RS08125 67d15acb89b3a00898f143d5ee3c5aa6 85 SUPERFAMILY SSF160272 1 85 4.84E-34 T 28-03-2018 IPR009962 Protein of unknown function DUF1488 AM393_RS24825 efbd388bc582fe52d5e8ed6121fa334a 363 TIGRFAM TIGR04030 perox_Avi_7169: alkylhydroperoxidase domain protein, Avi_7169 family 174 360 5.4E-92 T 28-03-2018 IPR023923 Alkylhydroperoxidase domain-containing protein, Avi7169 AM393_RS24825 efbd388bc582fe52d5e8ed6121fa334a 363 Gene3D G3DSA:1.20.1290.10 3 155 2.5E-11 T 28-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AM393_RS24825 efbd388bc582fe52d5e8ed6121fa334a 363 SUPERFAMILY SSF69118 182 360 1.2E-32 T 28-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AM393_RS24825 efbd388bc582fe52d5e8ed6121fa334a 363 SUPERFAMILY SSF69118 18 144 1.38E-17 T 28-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AM393_RS24825 efbd388bc582fe52d5e8ed6121fa334a 363 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 241 288 1.4E-10 T 28-03-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AM393_RS24825 efbd388bc582fe52d5e8ed6121fa334a 363 Gene3D G3DSA:1.20.1290.10 198 363 1.5E-25 T 28-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AM393_RS24825 efbd388bc582fe52d5e8ed6121fa334a 363 Pfam PF02627 Carboxymuconolactone decarboxylase family 225 288 1.3E-12 T 28-03-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AM393_RS24825 efbd388bc582fe52d5e8ed6121fa334a 363 TIGRFAM TIGR01926 peroxid_rel: uncharacterized peroxidase-related enzyme 195 360 2.3E-41 T 28-03-2018 IPR010195 Uncharacterised peroxidase-related AM393_RS11395 ad9cc256eeb5bdb62d3ba9121045d7e4 850 ProSitePatterns PS01093 Adenylate cyclase class-I signature 2. 598 612 - T 28-03-2018 IPR024686 Adenylate cyclase class-I, conserved site KEGG: 00230+4.6.1.1 AM393_RS11395 ad9cc256eeb5bdb62d3ba9121045d7e4 850 Pfam PF12633 Adenylate cyclase NT domain 5 200 7.6E-81 T 28-03-2018 IPR024685 Adenylate cyclase class-I, N-terminal domain KEGG: 00230+4.6.1.1 AM393_RS11395 ad9cc256eeb5bdb62d3ba9121045d7e4 850 PIRSF PIRSF001444 1 849 0.0 T 28-03-2018 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 AM393_RS11395 ad9cc256eeb5bdb62d3ba9121045d7e4 850 Pfam PF01295 Adenylate cyclase, class-I 228 826 4.0E-257 T 28-03-2018 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 AM393_RS11395 ad9cc256eeb5bdb62d3ba9121045d7e4 850 ProSitePatterns PS01092 Adenylate cyclase class-I signature 1. 242 253 - T 28-03-2018 IPR024686 Adenylate cyclase class-I, conserved site KEGG: 00230+4.6.1.1 AM393_RS22570 d728fac0f7971a5ca429ecc545238b1b 384 Gene3D G3DSA:2.40.160.10 10 384 1.8E-53 T 28-03-2018 AM393_RS22570 d728fac0f7971a5ca429ecc545238b1b 384 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 52 63 1.2E-17 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 AM393_RS22570 d728fac0f7971a5ca429ecc545238b1b 384 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 152 163 1.2E-17 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 AM393_RS22570 d728fac0f7971a5ca429ecc545238b1b 384 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 247 259 1.2E-17 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 AM393_RS22570 d728fac0f7971a5ca429ecc545238b1b 384 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 95 105 1.2E-17 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 AM393_RS22570 d728fac0f7971a5ca429ecc545238b1b 384 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 335 352 1.2E-17 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 AM393_RS22570 d728fac0f7971a5ca429ecc545238b1b 384 PRINTS PR00183 E.coli/Salmonella-type porin signature 95 117 6.1E-74 T 28-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 AM393_RS22570 d728fac0f7971a5ca429ecc545238b1b 384 PRINTS PR00183 E.coli/Salmonella-type porin signature 51 69 6.1E-74 T 28-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 AM393_RS22570 d728fac0f7971a5ca429ecc545238b1b 384 PRINTS PR00183 E.coli/Salmonella-type porin signature 150 172 6.1E-74 T 28-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 AM393_RS22570 d728fac0f7971a5ca429ecc545238b1b 384 PRINTS PR00183 E.coli/Salmonella-type porin signature 253 270 6.1E-74 T 28-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 AM393_RS22570 d728fac0f7971a5ca429ecc545238b1b 384 PRINTS PR00183 E.coli/Salmonella-type porin signature 22 38 6.1E-74 T 28-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 AM393_RS22570 d728fac0f7971a5ca429ecc545238b1b 384 PRINTS PR00183 E.coli/Salmonella-type porin signature 288 307 6.1E-74 T 28-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 AM393_RS22570 d728fac0f7971a5ca429ecc545238b1b 384 Pfam PF00267 Gram-negative porin 27 384 1.5E-150 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 AM393_RS22570 d728fac0f7971a5ca429ecc545238b1b 384 SUPERFAMILY SSF56935 22 384 4.19E-81 T 28-03-2018 AM393_RS08610 555fc8ddfe1ea8ec5b1988e2136c4d8b 292 Pfam PF01430 Hsp33 protein 5 272 3.6E-85 T 28-03-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 AM393_RS08610 555fc8ddfe1ea8ec5b1988e2136c4d8b 292 SUPERFAMILY SSF118352 225 283 1.09E-19 T 28-03-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 AM393_RS08610 555fc8ddfe1ea8ec5b1988e2136c4d8b 292 Gene3D G3DSA:3.90.1280.10 226 281 3.7E-24 T 28-03-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 AM393_RS08610 555fc8ddfe1ea8ec5b1988e2136c4d8b 292 Gene3D G3DSA:3.55.30.10 1 176 7.9E-62 T 28-03-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 AM393_RS08610 555fc8ddfe1ea8ec5b1988e2136c4d8b 292 SUPERFAMILY SSF64397 4 232 6.8E-76 T 28-03-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 AM393_RS08610 555fc8ddfe1ea8ec5b1988e2136c4d8b 292 Gene3D G3DSA:1.10.287.480 181 225 1.2E-19 T 28-03-2018 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain AM393_RS08610 555fc8ddfe1ea8ec5b1988e2136c4d8b 292 PIRSF PIRSF005261 1 285 5.8E-73 T 28-03-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 AM393_RS08610 555fc8ddfe1ea8ec5b1988e2136c4d8b 292 Hamap MF_00117 33 kDa chaperonin [hslO]. 4 284 33.644 T 28-03-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 AM393_RS13490 e78a57bd63d7317482a430d1afc0ab5e 182 Pfam PF10554 Ash protein family 22 130 2.1E-24 T 28-03-2018 IPR018880 Bacteriophage P4, Ash protein AM393_RS00115 f697e3beabfa031f647af11d36915d0d 160 Pfam PF00313 'Cold-shock' DNA-binding domain 4 64 7.5E-9 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM393_RS00115 f697e3beabfa031f647af11d36915d0d 160 Gene3D G3DSA:2.40.50.140 1 72 5.1E-15 T 28-03-2018 AM393_RS00115 f697e3beabfa031f647af11d36915d0d 160 SUPERFAMILY SSF50249 3 65 9.06E-11 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM393_RS06010 958ef11515ab66a43b6cb1e350e03628 359 Pfam PF01116 Fructose-bisphosphate aldolase class-II 17 355 1.4E-89 T 28-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AM393_RS06010 958ef11515ab66a43b6cb1e350e03628 359 TIGRFAM TIGR01520 FruBisAldo_II_A: fructose-bisphosphate aldolase, class II 4 358 1.3E-191 T 28-03-2018 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 AM393_RS06010 958ef11515ab66a43b6cb1e350e03628 359 Gene3D G3DSA:3.20.20.70 4 358 3.1E-101 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM393_RS06010 958ef11515ab66a43b6cb1e350e03628 359 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 14 357 4.6E-117 T 28-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AM393_RS06010 958ef11515ab66a43b6cb1e350e03628 359 PIRSF PIRSF001359 13 359 2.0E-105 T 28-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AM393_RS06010 958ef11515ab66a43b6cb1e350e03628 359 SUPERFAMILY SSF51569 4 357 2.56E-132 T 28-03-2018 AM393_RS06010 958ef11515ab66a43b6cb1e350e03628 359 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 101 112 - T 28-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AM393_RS06010 958ef11515ab66a43b6cb1e350e03628 359 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 172 183 - T 28-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AM393_RS19210 58bb5fc4d24dcc654eb81d46aeea262f 219 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 111 4.7E-31 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AM393_RS19210 58bb5fc4d24dcc654eb81d46aeea262f 219 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 217 1.7E-24 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS19210 58bb5fc4d24dcc654eb81d46aeea262f 219 SUPERFAMILY SSF161098 13 202 4.97E-45 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS19210 58bb5fc4d24dcc654eb81d46aeea262f 219 Gene3D G3DSA:1.10.3720.10 1 218 5.8E-45 T 28-03-2018 AM393_RS10190 5139743b4b9db1e8c9e64ff43d096dfb 500 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 412 498 1.6E-6 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS10190 5139743b4b9db1e8c9e64ff43d096dfb 500 SMART SM00387 409 499 8.3E-10 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS10190 5139743b4b9db1e8c9e64ff43d096dfb 500 Pfam PF05231 MASE1 14 275 2.5E-11 T 28-03-2018 IPR007895 MASE1 AM393_RS10190 5139743b4b9db1e8c9e64ff43d096dfb 500 Pfam PF07730 Histidine kinase 305 370 3.9E-15 T 28-03-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 AM393_RS10190 5139743b4b9db1e8c9e64ff43d096dfb 500 Gene3D G3DSA:3.30.565.10 273 498 4.7E-19 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS10190 5139743b4b9db1e8c9e64ff43d096dfb 500 SUPERFAMILY SSF55874 384 497 3.01E-16 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS23400 eb26ee0655072aa6b4edbdba5eb7470a 362 Gene3D G3DSA:3.40.50.300 1 342 3.7E-26 T 28-03-2018 AM393_RS23400 eb26ee0655072aa6b4edbdba5eb7470a 362 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 23 336 1.1E-24 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AM393_RS23400 eb26ee0655072aa6b4edbdba5eb7470a 362 SUPERFAMILY SSF52540 1 166 2.51E-25 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS23400 eb26ee0655072aa6b4edbdba5eb7470a 362 SUPERFAMILY SSF52540 219 359 2.51E-25 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS23400 eb26ee0655072aa6b4edbdba5eb7470a 362 PIRSF PIRSF029347 1 362 1.4E-166 T 28-03-2018 IPR014555 RecF-like AM393_RS24530 5c44bf64fa6a4fb9317ea0fdca8c5131 23 Hamap MF_00656 Coenzyme PQQ synthesis protein A [pqqA]. 1 23 11.158 T 28-03-2018 IPR011725 Coenzyme PQQ biosynthesis protein A GO:0018189 AM393_RS24530 5c44bf64fa6a4fb9317ea0fdca8c5131 23 Pfam PF08042 PqqA family 1 19 5.2E-9 T 28-03-2018 IPR011725 Coenzyme PQQ biosynthesis protein A GO:0018189 AM393_RS24530 5c44bf64fa6a4fb9317ea0fdca8c5131 23 TIGRFAM TIGR02107 PQQ_syn_pqqA: coenzyme PQQ precursor peptide PqqA 2 22 1.8E-12 T 28-03-2018 IPR011725 Coenzyme PQQ biosynthesis protein A GO:0018189 AM393_RS07045 38dcf40f78451606bc1a8c03d8639b06 365 Gene3D G3DSA:3.40.50.1970 1 159 3.4E-32 T 28-03-2018 AM393_RS07045 38dcf40f78451606bc1a8c03d8639b06 365 PIRSF PIRSF000112 1 360 2.3E-94 T 28-03-2018 AM393_RS07045 38dcf40f78451606bc1a8c03d8639b06 365 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 150 178 - T 28-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 AM393_RS07045 38dcf40f78451606bc1a8c03d8639b06 365 Gene3D G3DSA:1.20.1090.10 160 363 2.3E-43 T 28-03-2018 AM393_RS07045 38dcf40f78451606bc1a8c03d8639b06 365 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 241 261 - T 28-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 AM393_RS07045 38dcf40f78451606bc1a8c03d8639b06 365 SUPERFAMILY SSF56796 2 356 8.5E-89 T 28-03-2018 AM393_RS07045 38dcf40f78451606bc1a8c03d8639b06 365 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 348 9.1E-68 T 28-03-2018 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 AM393_RS21705 df31a9a470a44f110cb1ce3e4e139915 324 SUPERFAMILY SSF53850 91 322 7.47E-44 T 28-03-2018 AM393_RS21705 df31a9a470a44f110cb1ce3e4e139915 324 Gene3D G3DSA:3.40.190.10 181 258 1.1E-21 T 28-03-2018 AM393_RS21705 df31a9a470a44f110cb1ce3e4e139915 324 Gene3D G3DSA:3.40.190.10 91 180 2.2E-19 T 28-03-2018 AM393_RS21705 df31a9a470a44f110cb1ce3e4e139915 324 Gene3D G3DSA:1.10.10.10 1 85 4.9E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS21705 df31a9a470a44f110cb1ce3e4e139915 324 SUPERFAMILY SSF46785 1 85 2.89E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS21705 df31a9a470a44f110cb1ce3e4e139915 324 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 64 6.0E-15 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS21705 df31a9a470a44f110cb1ce3e4e139915 324 Pfam PF03466 LysR substrate binding domain 92 292 3.5E-40 T 28-03-2018 IPR005119 LysR, substrate-binding AM393_RS21705 df31a9a470a44f110cb1ce3e4e139915 324 Gene3D G3DSA:3.40.190.10 259 324 0.026 T 28-03-2018 AM393_RS21705 df31a9a470a44f110cb1ce3e4e139915 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.7E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS21705 df31a9a470a44f110cb1ce3e4e139915 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.7E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS21705 df31a9a470a44f110cb1ce3e4e139915 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.7E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS10340 ddf7306954afa3b3b303b93f9c288beb 360 Gene3D G3DSA:2.40.160.20 78 356 4.2E-7 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AM393_RS04105 6640afd8574ba4276e67e1f19dbd77f4 355 SUPERFAMILY SSF51197 8 321 3.3E-85 T 28-03-2018 AM393_RS04105 6640afd8574ba4276e67e1f19dbd77f4 355 Gene3D G3DSA:2.60.120.330 3 324 2.3E-90 T 28-03-2018 IPR027443 Isopenicillin N synthase-like AM393_RS04105 6640afd8574ba4276e67e1f19dbd77f4 355 PRINTS PR00682 Isopenicillin N synthase signature 34 51 1.4E-15 T 28-03-2018 AM393_RS04105 6640afd8574ba4276e67e1f19dbd77f4 355 PRINTS PR00682 Isopenicillin N synthase signature 269 287 1.4E-15 T 28-03-2018 AM393_RS04105 6640afd8574ba4276e67e1f19dbd77f4 355 PRINTS PR00682 Isopenicillin N synthase signature 155 171 1.4E-15 T 28-03-2018 AM393_RS04105 6640afd8574ba4276e67e1f19dbd77f4 355 PRINTS PR00682 Isopenicillin N synthase signature 242 268 1.4E-15 T 28-03-2018 AM393_RS04105 6640afd8574ba4276e67e1f19dbd77f4 355 Pfam PF03171 2OG-Fe(II) oxygenase superfamily 182 279 4.7E-15 T 28-03-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 AM393_RS04105 6640afd8574ba4276e67e1f19dbd77f4 355 Pfam PF14226 non-haem dioxygenase in morphine synthesis N-terminal 11 134 2.1E-32 T 28-03-2018 IPR026992 Non-haem dioxygenase N-terminal domain AM393_RS13280 5cca443a3c2c9edd328e43a5b2ecd0f9 254 Gene3D G3DSA:1.20.1260.10 3 254 1.2E-68 T 28-03-2018 IPR012347 Ferritin-related AM393_RS13280 5cca443a3c2c9edd328e43a5b2ecd0f9 254 PIRSF PIRSF020736 1 253 4.9E-88 T 28-03-2018 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 AM393_RS13280 5cca443a3c2c9edd328e43a5b2ecd0f9 254 SUPERFAMILY SSF47240 7 57 1.26E-71 T 28-03-2018 IPR009078 Ferritin-like superfamily AM393_RS13280 5cca443a3c2c9edd328e43a5b2ecd0f9 254 SUPERFAMILY SSF47240 105 252 1.26E-71 T 28-03-2018 IPR009078 Ferritin-like superfamily AM393_RS13280 5cca443a3c2c9edd328e43a5b2ecd0f9 254 Pfam PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) 5 248 7.9E-112 T 28-03-2018 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 AM393_RS12505 e9e3dab5f6477e755f4aef5d253fba21 227 TIGRFAM TIGR03717 R_switched_YjbE: integral membrane protein, YjbE family 14 186 7.6E-66 T 28-03-2018 IPR022301 Integral membrane protein YjbE AM393_RS12505 e9e3dab5f6477e755f4aef5d253fba21 227 Pfam PF03741 Integral membrane protein TerC family 16 185 4.6E-44 T 28-03-2018 IPR005496 Integral membrane protein TerC GO:0016021 AM393_RS20020 9c4dea2028d2f99b3a9d301871c09b22 248 SUPERFAMILY SSF53448 3 245 2.1E-69 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM393_RS20020 9c4dea2028d2f99b3a9d301871c09b22 248 Gene3D G3DSA:3.90.550.10 1 248 2.2E-53 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM393_RS20020 9c4dea2028d2f99b3a9d301871c09b22 248 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 1 241 7.4E-133 T 28-03-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 AM393_RS20020 9c4dea2028d2f99b3a9d301871c09b22 248 Hamap MF_00057 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase [kdsB]. 1 248 46.819 T 28-03-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 AM393_RS20020 9c4dea2028d2f99b3a9d301871c09b22 248 Pfam PF02348 Cytidylyltransferase 4 221 2.5E-72 T 28-03-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 AM393_RS05235 1615631ec7624664e390ac6727b4687f 269 SUPERFAMILY SSF81338 6 254 1.03E-75 T 28-03-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 AM393_RS05235 1615631ec7624664e390ac6727b4687f 269 Gene3D G3DSA:1.20.1080.10 2 257 8.7E-77 T 28-03-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 AM393_RS05235 1615631ec7624664e390ac6727b4687f 269 PRINTS PR00783 Major intrinsic protein family signature 182 204 4.3E-51 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AM393_RS05235 1615631ec7624664e390ac6727b4687f 269 PRINTS PR00783 Major intrinsic protein family signature 232 252 4.3E-51 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AM393_RS05235 1615631ec7624664e390ac6727b4687f 269 PRINTS PR00783 Major intrinsic protein family signature 149 167 4.3E-51 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AM393_RS05235 1615631ec7624664e390ac6727b4687f 269 PRINTS PR00783 Major intrinsic protein family signature 46 70 4.3E-51 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AM393_RS05235 1615631ec7624664e390ac6727b4687f 269 PRINTS PR00783 Major intrinsic protein family signature 7 26 4.3E-51 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AM393_RS05235 1615631ec7624664e390ac6727b4687f 269 PRINTS PR00783 Major intrinsic protein family signature 83 102 4.3E-51 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AM393_RS05235 1615631ec7624664e390ac6727b4687f 269 TIGRFAM TIGR00861 MIP: MIP family channel proteins 11 249 3.4E-65 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AM393_RS05235 1615631ec7624664e390ac6727b4687f 269 Pfam PF00230 Major intrinsic protein 7 249 1.3E-62 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AM393_RS05235 1615631ec7624664e390ac6727b4687f 269 ProSitePatterns PS00221 MIP family signature. 64 72 - T 28-03-2018 IPR022357 Major intrinsic protein, conserved site GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AM393_RS02225 4c4d941142c3fe2a8d8e8e360ac4b910 284 Pfam PF01261 Xylose isomerase-like TIM barrel 21 239 7.8E-43 T 28-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AM393_RS02225 4c4d941142c3fe2a8d8e8e360ac4b910 284 ProSitePatterns PS00729 AP endonucleases family 2 signature 1. 69 77 - T 28-03-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 AM393_RS02225 4c4d941142c3fe2a8d8e8e360ac4b910 284 SUPERFAMILY SSF51658 1 277 5.11E-103 T 28-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AM393_RS02225 4c4d941142c3fe2a8d8e8e360ac4b910 284 Gene3D G3DSA:3.20.20.150 1 284 9.2E-63 T 28-03-2018 AM393_RS02225 4c4d941142c3fe2a8d8e8e360ac4b910 284 TIGRFAM TIGR00587 nfo: apurinic endonuclease (APN1) 3 276 7.7E-113 T 28-03-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 AM393_RS02225 4c4d941142c3fe2a8d8e8e360ac4b910 284 ProSitePatterns PS00730 AP endonucleases family 2 signature 2. 175 182 - T 28-03-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 AM393_RS02225 4c4d941142c3fe2a8d8e8e360ac4b910 284 Hamap MF_00152 Probable endonuclease 4 [nfo]. 2 279 44.618 T 28-03-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 AM393_RS02225 4c4d941142c3fe2a8d8e8e360ac4b910 284 ProSitePatterns PS00731 AP endonucleases family 2 signature 3. 215 231 - T 28-03-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 AM393_RS02225 4c4d941142c3fe2a8d8e8e360ac4b910 284 SMART SM00518 3 279 1.8E-135 T 28-03-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 AM393_RS24690 295855e4b98ad7469860a607c7369694 134 SUPERFAMILY SSF101756 30 128 1.18E-26 T 28-03-2018 IPR005220 Bacterial OB-fold AM393_RS24690 295855e4b98ad7469860a607c7369694 134 Gene3D G3DSA:2.40.50.200 21 133 1.4E-22 T 28-03-2018 AM393_RS24690 295855e4b98ad7469860a607c7369694 134 Pfam PF04076 Bacterial OB fold (BOF) protein 30 128 5.4E-32 T 28-03-2018 IPR005220 Bacterial OB-fold AM393_RS24690 295855e4b98ad7469860a607c7369694 134 TIGRFAM TIGR00156 TIGR00156: TIGR00156 family protein 1 130 4.3E-41 T 28-03-2018 IPR016052 Bacteriophage 933W, L0136 AM393_RS14970 3212296ee28425f4e93ff5e39bf88470 887 SUPERFAMILY SSF52518 59 469 9.67E-143 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold AM393_RS14970 3212296ee28425f4e93ff5e39bf88470 887 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 361 425 1.2E-4 T 28-03-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AM393_RS14970 3212296ee28425f4e93ff5e39bf88470 887 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 133 294 5.6E-9 T 28-03-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AM393_RS14970 3212296ee28425f4e93ff5e39bf88470 887 Gene3D G3DSA:3.40.50.970 57 471 8.8E-83 T 28-03-2018 AM393_RS14970 3212296ee28425f4e93ff5e39bf88470 887 SUPERFAMILY SSF52922 702 885 5.3E-64 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AM393_RS14970 3212296ee28425f4e93ff5e39bf88470 887 Gene3D G3DSA:3.40.50.920 707 887 4.6E-43 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AM393_RS14970 3212296ee28425f4e93ff5e39bf88470 887 Gene3D G3DSA:3.40.50.970 472 706 2.4E-66 T 28-03-2018 AM393_RS14970 3212296ee28425f4e93ff5e39bf88470 887 SUPERFAMILY SSF52518 474 701 8.59E-98 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold AM393_RS14970 3212296ee28425f4e93ff5e39bf88470 887 PIRSF PIRSF000156 1 887 0.0 T 28-03-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 AM393_RS14970 3212296ee28425f4e93ff5e39bf88470 887 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 5 886 0.0 T 28-03-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 AM393_RS01265 1b55a03022a11b582186cd43a159f9d6 267 Gene3D G3DSA:3.40.50.1820 2 249 5.4E-28 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AM393_RS01265 1b55a03022a11b582186cd43a159f9d6 267 Pfam PF00975 Thioesterase domain 20 249 9.3E-67 T 28-03-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 AM393_RS01265 1b55a03022a11b582186cd43a159f9d6 267 SUPERFAMILY SSF53474 9 246 1.88E-46 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AM393_RS19650 82f27dae56d3d57ab1ded368f215ec7c 366 Pfam PF05954 Phage late control gene D protein (GPD) 62 345 1.4E-38 T 28-03-2018 AM393_RS19650 82f27dae56d3d57ab1ded368f215ec7c 366 SUPERFAMILY SSF69279 15 188 6.46E-29 T 28-03-2018 AM393_RS19650 82f27dae56d3d57ab1ded368f215ec7c 366 Gene3D G3DSA:3.55.50.10 112 224 3.9E-9 T 28-03-2018 AM393_RS17305 4b5ac5b3b7100b31ad889885d00ca575 434 PIRSF PIRSF001369 39 429 6.7E-135 T 28-03-2018 IPR024176 Citrate synthase, bacterial-type AM393_RS17305 4b5ac5b3b7100b31ad889885d00ca575 434 Gene3D G3DSA:1.10.580.10 31 282 4.2E-78 T 28-03-2018 IPR016142 Citrate synthase-like, large alpha subdomain AM393_RS17305 4b5ac5b3b7100b31ad889885d00ca575 434 Pfam PF00285 Citrate synthase, C-terminal domain 47 411 8.4E-108 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 AM393_RS17305 4b5ac5b3b7100b31ad889885d00ca575 434 SUPERFAMILY SSF48256 16 424 7.07E-136 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 AM393_RS17305 4b5ac5b3b7100b31ad889885d00ca575 434 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 18 422 8.0E-174 T 28-03-2018 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 AM393_RS17305 4b5ac5b3b7100b31ad889885d00ca575 434 PRINTS PR00143 Citrate synthase signature 242 270 1.9E-37 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 AM393_RS17305 4b5ac5b3b7100b31ad889885d00ca575 434 PRINTS PR00143 Citrate synthase signature 166 179 1.9E-37 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 AM393_RS17305 4b5ac5b3b7100b31ad889885d00ca575 434 PRINTS PR00143 Citrate synthase signature 297 317 1.9E-37 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 AM393_RS17305 4b5ac5b3b7100b31ad889885d00ca575 434 PRINTS PR00143 Citrate synthase signature 220 235 1.9E-37 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 AM393_RS17305 4b5ac5b3b7100b31ad889885d00ca575 434 PRINTS PR00143 Citrate synthase signature 380 394 1.9E-37 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 AM393_RS17305 4b5ac5b3b7100b31ad889885d00ca575 434 PRINTS PR00143 Citrate synthase signature 360 376 1.9E-37 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 AM393_RS17305 4b5ac5b3b7100b31ad889885d00ca575 434 Gene3D G3DSA:1.10.230.10 283 380 4.8E-24 T 28-03-2018 IPR016143 Citrate synthase-like, small alpha subdomain AM393_RS10650 f6579d0e1db902e01328e998d4799dc8 193 Pfam PF12804 MobA-like NTP transferase domain 8 159 4.7E-36 T 28-03-2018 IPR025877 MobA-like NTP transferase AM393_RS10650 f6579d0e1db902e01328e998d4799dc8 193 TIGRFAM TIGR02665 molyb_mobA: molybdenum cofactor guanylyltransferase 6 187 3.5E-69 T 28-03-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 AM393_RS10650 f6579d0e1db902e01328e998d4799dc8 193 SUPERFAMILY SSF53448 6 187 1.22E-39 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM393_RS10650 f6579d0e1db902e01328e998d4799dc8 193 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 4 189 28.72 T 28-03-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 AM393_RS10650 f6579d0e1db902e01328e998d4799dc8 193 Gene3D G3DSA:3.90.550.10 1 191 4.7E-38 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM393_RS07250 64c6c284a074088f66cbe7276cd0ff60 122 Pfam PF05656 Protein of unknown function (DUF805) 11 117 1.7E-34 T 28-03-2018 IPR008523 Protein of unknown function DUF805 GO:0016021 AM393_RS27025 f114d833669f095eeaa557aa1ac2d51c 246 Pfam PF06586 TraK protein 15 236 3.3E-53 T 28-03-2018 IPR010563 Pilus assembly TraK AM393_RS27025 f114d833669f095eeaa557aa1ac2d51c 246 TIGRFAM TIGR02756 TraK_Ftype: type-F conjugative transfer system secretin TraK 15 237 6.7E-60 T 28-03-2018 IPR014126 Type-F conjugative transfer system secretin TraK AM393_RS24960 f5dc1dddfbf765ecc67af5159b8d7054 322 PIRSF PIRSF002825 3 310 9.5E-54 T 28-03-2018 IPR026045 Ferric binding protein AM393_RS24960 f5dc1dddfbf765ecc67af5159b8d7054 322 SUPERFAMILY SSF53850 25 295 9.13E-63 T 28-03-2018 AM393_RS24960 f5dc1dddfbf765ecc67af5159b8d7054 322 Pfam PF13343 Bacterial extracellular solute-binding protein 74 296 8.9E-32 T 28-03-2018 AM393_RS24960 f5dc1dddfbf765ecc67af5159b8d7054 322 Gene3D G3DSA:3.40.190.10 26 168 3.3E-20 T 28-03-2018 AM393_RS24960 f5dc1dddfbf765ecc67af5159b8d7054 322 Gene3D G3DSA:3.40.190.10 169 291 5.5E-21 T 28-03-2018 AM393_RS07400 7403297b186c04d5daa6bd658ba5fb0f 215 SMART SM00859 3 103 0.0079 T 28-03-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AM393_RS07400 7403297b186c04d5daa6bd658ba5fb0f 215 SUPERFAMILY SSF51735 2 198 6.42E-39 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS07400 7403297b186c04d5daa6bd658ba5fb0f 215 Gene3D G3DSA:3.40.50.720 2 211 7.8E-19 T 28-03-2018 AM393_RS07400 7403297b186c04d5daa6bd658ba5fb0f 215 Pfam PF13460 NAD(P)H-binding 8 189 1.4E-9 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS23565 7892cedb231012ed2bfed29007ea20d8 160 SUPERFAMILY SSF55729 1 152 4.97E-25 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM393_RS23565 7892cedb231012ed2bfed29007ea20d8 160 Gene3D G3DSA:3.40.630.30 1 160 6.6E-31 T 28-03-2018 AM393_RS23565 7892cedb231012ed2bfed29007ea20d8 160 Pfam PF00583 Acetyltransferase (GNAT) family 39 129 3.2E-14 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AM393_RS20990 fca415f1e10a6b8cc8a04b70e7d1654c 237 SMART SM00418 22 101 2.6E-15 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM393_RS20990 fca415f1e10a6b8cc8a04b70e7d1654c 237 Pfam PF01022 Bacterial regulatory protein, arsR family 29 74 2.8E-8 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM393_RS20990 fca415f1e10a6b8cc8a04b70e7d1654c 237 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 57 72 6.0E-7 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM393_RS20990 fca415f1e10a6b8cc8a04b70e7d1654c 237 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 72 87 6.0E-7 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM393_RS20990 fca415f1e10a6b8cc8a04b70e7d1654c 237 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 24 39 6.0E-7 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM393_RS20990 fca415f1e10a6b8cc8a04b70e7d1654c 237 Gene3D G3DSA:1.10.10.10 8 196 1.3E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS20990 fca415f1e10a6b8cc8a04b70e7d1654c 237 Gene3D G3DSA:1.10.10.10 197 235 0.054 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS20990 fca415f1e10a6b8cc8a04b70e7d1654c 237 SUPERFAMILY SSF46785 15 101 2.14E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS23010 c03698f82cd83a1b0e9db095822e9779 268 SUPERFAMILY SSF46785 24 95 3.7E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS23010 c03698f82cd83a1b0e9db095822e9779 268 Pfam PF09339 IclR helix-turn-helix domain 25 73 3.0E-13 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AM393_RS23010 c03698f82cd83a1b0e9db095822e9779 268 Gene3D G3DSA:3.30.450.40 94 268 2.3E-56 T 28-03-2018 IPR029016 GAF domain-like AM393_RS23010 c03698f82cd83a1b0e9db095822e9779 268 TIGRFAM TIGR02431 pcaR_pcaU: beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family 20 265 3.1E-97 T 28-03-2018 IPR012794 Beta-ketoadipate transcriptional regulator, PcaR/PcaU/PobR GO:0003677|GO:0045893|GO:0046278 AM393_RS23010 c03698f82cd83a1b0e9db095822e9779 268 Pfam PF01614 Bacterial transcriptional regulator 139 264 6.8E-35 T 28-03-2018 IPR014757 Transcription regulator IclR, C-terminal AM393_RS23010 c03698f82cd83a1b0e9db095822e9779 268 Gene3D G3DSA:1.10.10.10 16 93 2.6E-10 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS23010 c03698f82cd83a1b0e9db095822e9779 268 SUPERFAMILY SSF55781 89 267 3.24E-51 T 28-03-2018 IPR029016 GAF domain-like AM393_RS23010 c03698f82cd83a1b0e9db095822e9779 268 SMART SM00346 23 112 4.1E-25 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AM393_RS11430 8f3deea10e0aebd81a529d625e743116 720 SUPERFAMILY SSF52540 7 642 4.26E-181 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS11430 8f3deea10e0aebd81a529d625e743116 720 Pfam PF13361 UvrD-like helicase C-terminal domain 277 616 1.6E-75 T 28-03-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 AM393_RS11430 8f3deea10e0aebd81a529d625e743116 720 TIGRFAM TIGR01075 uvrD: DNA helicase II 6 718 0.0 T 28-03-2018 IPR005753 DNA helicase, ATP-dependent, UvrD type GO:0004003|GO:0005737|GO:0006268 AM393_RS11430 8f3deea10e0aebd81a529d625e743116 720 Pfam PF00580 UvrD/REP helicase N-terminal domain 10 271 4.9E-76 T 28-03-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 AM393_RS11430 8f3deea10e0aebd81a529d625e743116 720 Gene3D G3DSA:3.40.50.300 283 382 2.7E-26 T 28-03-2018 AM393_RS11430 8f3deea10e0aebd81a529d625e743116 720 Gene3D G3DSA:3.40.50.300 383 659 1.2E-52 T 28-03-2018 AM393_RS11430 8f3deea10e0aebd81a529d625e743116 720 Gene3D G3DSA:3.40.50.300 5 154 1.2E-27 T 28-03-2018 AM393_RS11430 8f3deea10e0aebd81a529d625e743116 720 Gene3D G3DSA:3.40.50.300 155 282 1.5E-32 T 28-03-2018 AM393_RS12160 ade3e9b3b1f7d02077f258c5bdc40969 586 Gene3D G3DSA:3.40.50.1820 97 479 3.5E-21 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AM393_RS12160 ade3e9b3b1f7d02077f258c5bdc40969 586 SUPERFAMILY SSF53474 119 229 6.49E-13 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AM393_RS12160 ade3e9b3b1f7d02077f258c5bdc40969 586 SUPERFAMILY SSF53474 364 471 6.49E-13 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AM393_RS12160 ade3e9b3b1f7d02077f258c5bdc40969 586 Pfam PF07519 Tannase and feruloyl esterase 72 548 9.8E-116 T 28-03-2018 IPR011118 Tannase/feruloyl esterase MetaCyc: PWY-6784 AM393_RS00065 4216749743b1f43d8582633727fe792b 451 Pfam PF06958 S-type Pyocin 142 305 2.9E-50 T 28-03-2018 IPR016128 Pyosin/cloacin translocation domain GO:0009405 AM393_RS00065 4216749743b1f43d8582633727fe792b 451 SUPERFAMILY SSF69369 154 215 5.23E-5 T 28-03-2018 IPR016128 Pyosin/cloacin translocation domain GO:0009405 AM393_RS00065 4216749743b1f43d8582633727fe792b 451 SUPERFAMILY SSF69369 263 308 5.23E-5 T 28-03-2018 IPR016128 Pyosin/cloacin translocation domain GO:0009405 AM393_RS00390 3deacc5be1a390caaf9b6f7622e2e066 454 Pfam PF03313 Serine dehydratase alpha chain 184 448 1.5E-94 T 28-03-2018 IPR005130 Serine dehydratase-like, alpha subunit AM393_RS00390 3deacc5be1a390caaf9b6f7622e2e066 454 Gene3D G3DSA:3.30.1330.90 10 158 5.0E-52 T 28-03-2018 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 AM393_RS00390 3deacc5be1a390caaf9b6f7622e2e066 454 SUPERFAMILY SSF143548 16 158 3.66E-46 T 28-03-2018 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 AM393_RS00390 3deacc5be1a390caaf9b6f7622e2e066 454 Pfam PF03315 Serine dehydratase beta chain 3 155 4.0E-56 T 28-03-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 AM393_RS00390 3deacc5be1a390caaf9b6f7622e2e066 454 Gene3D G3DSA:1.10.4100.10 261 444 5.1E-33 T 28-03-2018 AM393_RS00390 3deacc5be1a390caaf9b6f7622e2e066 454 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 2 451 6.1E-228 T 28-03-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 AM393_RS12540 9d58e485af81cf3099ceaaca9424979f 188 Gene3D G3DSA:1.10.10.10 20 185 2.3E-8 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS12540 9d58e485af81cf3099ceaaca9424979f 188 Pfam PF00196 Bacterial regulatory proteins, luxR family 121 171 1.8E-6 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS12540 9d58e485af81cf3099ceaaca9424979f 188 SUPERFAMILY SSF46894 115 182 4.42E-9 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM393_RS12540 9d58e485af81cf3099ceaaca9424979f 188 SMART SM00421 118 175 0.0013 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS10380 bd9ff05cf38152af102e98634785f0ce 119 Pfam PF00825 Ribonuclease P 6 111 1.2E-32 T 28-03-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 AM393_RS10380 bd9ff05cf38152af102e98634785f0ce 119 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 17 105 1.0E-44 T 28-03-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 AM393_RS10380 bd9ff05cf38152af102e98634785f0ce 119 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 56 70 - T 28-03-2018 IPR020539 Ribonuclease P, conserved site GO:0004526 AM393_RS10380 bd9ff05cf38152af102e98634785f0ce 119 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 5 115 9.6E-37 T 28-03-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 AM393_RS10380 bd9ff05cf38152af102e98634785f0ce 119 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 6 115 17.811 T 28-03-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 AM393_RS10380 bd9ff05cf38152af102e98634785f0ce 119 Gene3D G3DSA:3.30.230.10 1 119 2.1E-32 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AM393_RS10380 bd9ff05cf38152af102e98634785f0ce 119 SUPERFAMILY SSF54211 5 115 2.23E-31 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM393_RS08600 f59fa958f55234473e23ff2e31733c18 227 Pfam PF13419 Haloacid dehalogenase-like hydrolase 13 190 9.8E-10 T 28-03-2018 IPR023214 HAD-like domain AM393_RS08600 f59fa958f55234473e23ff2e31733c18 227 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 105 118 4.9E-6 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM393_RS08600 f59fa958f55234473e23ff2e31733c18 227 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 154 174 4.9E-6 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM393_RS08600 f59fa958f55234473e23ff2e31733c18 227 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 181 194 4.9E-6 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM393_RS08600 f59fa958f55234473e23ff2e31733c18 227 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 136 152 4.9E-6 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM393_RS08600 f59fa958f55234473e23ff2e31733c18 227 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 10 21 4.9E-6 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM393_RS08600 f59fa958f55234473e23ff2e31733c18 227 Gene3D G3DSA:3.40.50.1000 45 208 8.9E-22 T 28-03-2018 IPR023214 HAD-like domain AM393_RS08600 f59fa958f55234473e23ff2e31733c18 227 SUPERFAMILY SSF56784 7 217 1.92E-45 T 28-03-2018 IPR023214 HAD-like domain AM393_RS08600 f59fa958f55234473e23ff2e31733c18 227 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 13 191 1.6E-16 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM393_RS08600 f59fa958f55234473e23ff2e31733c18 227 Gene3D G3DSA:3.40.50.1000 7 44 0.34 T 28-03-2018 IPR023214 HAD-like domain AM393_RS17425 4b3ef6b007e12cfed99b8acb9c1d0440 343 Gene3D G3DSA:1.10.3470.10 29 338 8.3E-37 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AM393_RS17425 4b3ef6b007e12cfed99b8acb9c1d0440 343 Pfam PF02653 Branched-chain amino acid transport system / permease component 62 332 2.9E-45 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AM393_RS13900 de84d1cadadc0a5f8c34c94cefed1a9d 265 TIGRFAM TIGR02311 HpaI: 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 3 250 6.4E-131 T 28-03-2018 IPR012689 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase GO:0010124|GO:0018802 KEGG: 00350+4.1.2.52 AM393_RS13900 de84d1cadadc0a5f8c34c94cefed1a9d 265 Hamap MF_01292 4-hydroxy-2-oxo-heptane-1,7-dioate aldolase [hpcH]. 1 263 64.348 T 28-03-2018 IPR023701 4-hydroxy-2-oxo-heptane-1,7-dioate aldolase, Enterobacteriales GO:0010124|GO:0018802 KEGG: 00350+4.1.2.52 AM393_RS13900 de84d1cadadc0a5f8c34c94cefed1a9d 265 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 15 240 9.6E-68 T 28-03-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 AM393_RS13900 de84d1cadadc0a5f8c34c94cefed1a9d 265 SUPERFAMILY SSF51621 2 252 8.17E-85 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AM393_RS13900 de84d1cadadc0a5f8c34c94cefed1a9d 265 Gene3D G3DSA:3.20.20.60 1 264 6.3E-52 T 28-03-2018 AM393_RS06765 8b4682b009444f67fd34dbbc6a30c3da 193 Gene3D G3DSA:3.40.50.360 1 193 2.3E-36 T 28-03-2018 IPR029039 Flavoprotein-like domain AM393_RS06765 8b4682b009444f67fd34dbbc6a30c3da 193 SUPERFAMILY SSF52218 1 192 6.98E-43 T 28-03-2018 IPR029039 Flavoprotein-like domain AM393_RS06765 8b4682b009444f67fd34dbbc6a30c3da 193 Pfam PF02525 Flavodoxin-like fold 3 188 1.7E-36 T 28-03-2018 IPR003680 Flavodoxin-like fold AM393_RS08890 9336abcb1ea3c0ed20f4ba3b6696a071 421 PIRSF PIRSF000521 1 128 7.2E-6 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM393_RS08890 9336abcb1ea3c0ed20f4ba3b6696a071 421 PIRSF PIRSF000521 125 421 2.3E-46 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM393_RS08890 9336abcb1ea3c0ed20f4ba3b6696a071 421 TIGRFAM TIGR00700 GABAtrnsam: 4-aminobutyrate transaminase 8 420 3.6E-200 T 28-03-2018 IPR004632 4-aminobutyrate aminotransferase, bacterial GO:0003867|GO:0009448 AM393_RS08890 9336abcb1ea3c0ed20f4ba3b6696a071 421 Pfam PF00202 Aminotransferase class-III 21 419 6.9E-130 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM393_RS08890 9336abcb1ea3c0ed20f4ba3b6696a071 421 Gene3D G3DSA:3.90.1150.10 306 421 8.2E-30 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM393_RS08890 9336abcb1ea3c0ed20f4ba3b6696a071 421 SUPERFAMILY SSF53383 23 420 8.21E-136 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM393_RS08890 9336abcb1ea3c0ed20f4ba3b6696a071 421 Gene3D G3DSA:3.40.640.10 183 305 8.6E-47 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM393_RS08890 9336abcb1ea3c0ed20f4ba3b6696a071 421 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 235 272 - T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM393_RS08890 9336abcb1ea3c0ed20f4ba3b6696a071 421 Gene3D G3DSA:3.90.1150.10 10 182 1.3E-39 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM393_RS10450 f53d5a30ac2b5a272e3020d8722199c5 544 SUPERFAMILY SSF56935 125 544 5.55E-95 T 28-03-2018 AM393_RS10450 f53d5a30ac2b5a272e3020d8722199c5 544 Gene3D G3DSA:2.40.170.10 123 544 5.7E-92 T 28-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 AM393_RS10450 f53d5a30ac2b5a272e3020d8722199c5 544 Pfam PF02264 LamB porin 127 544 6.9E-83 T 28-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 AM393_RS10450 f53d5a30ac2b5a272e3020d8722199c5 544 Pfam PF11471 Maltoporin periplasmic N-terminal extension 2 56 2.8E-12 T 28-03-2018 IPR021570 LamB-type porin N-terminal domain AM393_RS10450 f53d5a30ac2b5a272e3020d8722199c5 544 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 132 539 0.0 T 28-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 AM393_RS01585 3ee1bc1f47ac0fd9524159e7144d9679 107 PIRSF PIRSF028773 1 107 1.2E-53 T 28-03-2018 IPR007458 Protein of unknown function DUF496 AM393_RS01585 3ee1bc1f47ac0fd9524159e7144d9679 107 ProDom PD030876 UPF0265 YEEX HELIX ALPHA BFL460 UNCHARACTERIZED FN0411 HI1168 VPA1226 BCR 11 98 9.0E-43 T 28-03-2018 IPR007458 Protein of unknown function DUF496 AM393_RS01585 3ee1bc1f47ac0fd9524159e7144d9679 107 Pfam PF04363 Protein of unknown function (DUF496) 8 99 7.0E-46 T 28-03-2018 IPR007458 Protein of unknown function DUF496 AM393_RS01585 3ee1bc1f47ac0fd9524159e7144d9679 107 Hamap MF_00683 UPF0265 protein YeeX [yeeX]. 8 102 25.684 T 28-03-2018 IPR007458 Protein of unknown function DUF496 AM393_RS11375 d950ad67110af8b02797b0bbf6bc661a 398 Pfam PF07219 HemY protein N-terminus 26 132 1.7E-36 T 28-03-2018 IPR010817 HemY, N-terminal AM393_RS11375 d950ad67110af8b02797b0bbf6bc661a 398 SUPERFAMILY SSF48452 97 216 5.64E-10 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM393_RS11375 d950ad67110af8b02797b0bbf6bc661a 398 SUPERFAMILY SSF48452 331 382 5.64E-10 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM393_RS11375 d950ad67110af8b02797b0bbf6bc661a 398 Gene3D G3DSA:1.25.40.10 83 219 2.5E-9 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM393_RS11375 d950ad67110af8b02797b0bbf6bc661a 398 TIGRFAM TIGR00540 TPR_hemY_coli: heme biosynthesis-associated TPR protein 4 386 3.9E-117 T 28-03-2018 IPR005254 Heme biosynthesis-associated TPR protein GO:0016020|GO:0042168 AM393_RS11375 d950ad67110af8b02797b0bbf6bc661a 398 Pfam PF07719 Tetratricopeptide repeat 329 360 1.6E-5 T 28-03-2018 IPR013105 Tetratricopeptide repeat 2 AM393_RS11375 d950ad67110af8b02797b0bbf6bc661a 398 Gene3D G3DSA:1.25.40.10 220 390 7.1E-11 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM393_RS08680 d068032d2fc120547e14958861cba6f1 697 TIGRFAM TIGR00217 malQ: 4-alpha-glucanotransferase 101 686 6.4E-271 T 28-03-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 AM393_RS08680 d068032d2fc120547e14958861cba6f1 697 Gene3D G3DSA:3.20.20.80 139 687 2.0E-154 T 28-03-2018 AM393_RS08680 d068032d2fc120547e14958861cba6f1 697 Pfam PF02446 4-alpha-glucanotransferase 149 666 1.4E-127 T 28-03-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 AM393_RS08680 d068032d2fc120547e14958861cba6f1 697 SUPERFAMILY SSF51445 609 683 3.69E-145 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily AM393_RS08680 d068032d2fc120547e14958861cba6f1 697 SUPERFAMILY SSF51445 143 571 3.69E-145 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily AM393_RS24020 d85fc26315d72133a4241abe8762a865 393 SUPERFAMILY SSF51430 73 372 9.3E-90 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM393_RS24020 d85fc26315d72133a4241abe8762a865 393 Gene3D G3DSA:3.20.20.100 66 393 3.5E-91 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM393_RS24020 d85fc26315d72133a4241abe8762a865 393 Pfam PF00248 Aldo/keto reductase family 94 372 2.3E-66 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM393_RS15160 4821ff542f52449378346890e84f0996 328 SUPERFAMILY SSF158544 215 281 1.88E-18 T 28-03-2018 AM393_RS15160 4821ff542f52449378346890e84f0996 328 PIRSF PIRSF002786 1 322 7.3E-78 T 28-03-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 AM393_RS15160 4821ff542f52449378346890e84f0996 328 Gene3D G3DSA:1.10.40.60 216 278 1.5E-21 T 28-03-2018 AM393_RS15160 4821ff542f52449378346890e84f0996 328 Pfam PF03934 Type II secretion system (T2SS), protein K 32 313 2.9E-81 T 28-03-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 AM393_RS15160 4821ff542f52449378346890e84f0996 328 Gene3D G3DSA:1.10.40.60 100 214 3.8E-31 T 28-03-2018 AM393_RS15160 4821ff542f52449378346890e84f0996 328 SUPERFAMILY SSF158544 102 212 5.75E-32 T 28-03-2018 AM393_RS15160 4821ff542f52449378346890e84f0996 328 SUPERFAMILY SSF54523 38 101 1.1E-22 T 28-03-2018 AM393_RS15160 4821ff542f52449378346890e84f0996 328 SUPERFAMILY SSF54523 281 319 1.1E-22 T 28-03-2018 AM393_RS09025 22ceecce4abf88df59dc0362282241b2 277 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 89 271 2.2E-27 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS09025 22ceecce4abf88df59dc0362282241b2 277 SUPERFAMILY SSF161098 66 253 4.71E-21 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS09025 22ceecce4abf88df59dc0362282241b2 277 Gene3D G3DSA:1.10.3720.10 3 261 3.6E-31 T 28-03-2018 AM393_RS09025 22ceecce4abf88df59dc0362282241b2 277 TIGRFAM TIGR02790 nickel_nikC: nickel ABC transporter, permease subunit NikC 12 268 6.1E-112 T 28-03-2018 IPR014157 Nickel ABC transporter, permease subunit NikC GO:0015099|GO:0016021 AM393_RS05715 6d7c7afc5c55ce30bb171a51bdd533c8 440 SUPERFAMILY SSF46894 137 188 5.78E-6 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM393_RS05715 6d7c7afc5c55ce30bb171a51bdd533c8 440 SUPERFAMILY SSF141868 217 439 5.36E-39 T 28-03-2018 IPR001633 EAL domain AM393_RS05715 6d7c7afc5c55ce30bb171a51bdd533c8 440 Gene3D G3DSA:3.20.20.450 206 440 1.5E-40 T 28-03-2018 IPR001633 EAL domain AM393_RS05715 6d7c7afc5c55ce30bb171a51bdd533c8 440 SMART SM00052 211 440 4.2E-58 T 28-03-2018 IPR001633 EAL domain AM393_RS05715 6d7c7afc5c55ce30bb171a51bdd533c8 440 Gene3D G3DSA:1.10.10.10 61 196 1.6E-4 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS05715 6d7c7afc5c55ce30bb171a51bdd533c8 440 Pfam PF00563 EAL domain 217 439 3.4E-45 T 28-03-2018 IPR001633 EAL domain AM393_RS01655 9b458b6503df0ad3d2a56d16c673cd93 353 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 208 217 - T 28-03-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 AM393_RS01655 9b458b6503df0ad3d2a56d16c673cd93 353 Gene3D G3DSA:3.40.640.10 65 241 4.7E-42 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM393_RS01655 9b458b6503df0ad3d2a56d16c673cd93 353 Gene3D G3DSA:3.90.1150.10 2 64 1.9E-6 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM393_RS01655 9b458b6503df0ad3d2a56d16c673cd93 353 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 8 349 1.7E-122 T 28-03-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 AM393_RS01655 9b458b6503df0ad3d2a56d16c673cd93 353 Gene3D G3DSA:3.90.1150.10 242 350 6.8E-15 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM393_RS01655 9b458b6503df0ad3d2a56d16c673cd93 353 Pfam PF00155 Aminotransferase class I and II 44 348 2.3E-64 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AM393_RS01655 9b458b6503df0ad3d2a56d16c673cd93 353 SUPERFAMILY SSF53383 5 349 1.22E-79 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM393_RS01655 9b458b6503df0ad3d2a56d16c673cd93 353 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 6 352 54.32 T 28-03-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 AM393_RS14195 73e4b3a2e3da571c944f2bcd92188076 53 PIRSF PIRSF036466 1 53 5.1E-21 T 28-03-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 AM393_RS14195 73e4b3a2e3da571c944f2bcd92188076 53 Hamap MF_01361 UPF0391 membrane protein YtjA [ytjA]. 1 48 18.67 T 28-03-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 AM393_RS14195 73e4b3a2e3da571c944f2bcd92188076 53 Pfam PF07043 Protein of unknown function (DUF1328) 6 44 1.9E-13 T 28-03-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 AM393_RS07600 ff5425da6d363d7246cfbc165f3ca4db 323 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 95 - T 28-03-2018 IPR033749 Polyprenyl synthetase, conserved site AM393_RS07600 ff5425da6d363d7246cfbc165f3ca4db 323 Gene3D G3DSA:1.10.600.10 1 323 6.8E-102 T 28-03-2018 IPR008949 Isoprenoid synthase domain AM393_RS07600 ff5425da6d363d7246cfbc165f3ca4db 323 Pfam PF00348 Polyprenyl synthetase 30 263 7.2E-76 T 28-03-2018 IPR000092 Polyprenyl synthetase GO:0008299 AM393_RS07600 ff5425da6d363d7246cfbc165f3ca4db 323 SUPERFAMILY SSF48576 6 322 3.74E-99 T 28-03-2018 IPR008949 Isoprenoid synthase domain AM393_RS07600 ff5425da6d363d7246cfbc165f3ca4db 323 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 203 215 - T 28-03-2018 IPR033749 Polyprenyl synthetase, conserved site AM393_RS11600 26e2d2119050052e1c7ff8ebdbf82081 177 Pfam PF12724 Flavodoxin domain 4 152 1.1E-52 T 28-03-2018 IPR026816 Flavodoxin domain AM393_RS11600 26e2d2119050052e1c7ff8ebdbf82081 177 SUPERFAMILY SSF52218 2 173 4.01E-32 T 28-03-2018 IPR029039 Flavoprotein-like domain AM393_RS11600 26e2d2119050052e1c7ff8ebdbf82081 177 Gene3D G3DSA:3.40.50.360 2 174 3.1E-21 T 28-03-2018 IPR029039 Flavoprotein-like domain AM393_RS11600 26e2d2119050052e1c7ff8ebdbf82081 177 ProSitePatterns PS00201 Flavodoxin signature. 5 21 - T 28-03-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 AM393_RS28860 e7e4dcc8e45053c5f8de9170a74e2641 489 Gene3D G3DSA:3.40.1800.10 375 433 0.0025 T 28-03-2018 AM393_RS28860 e7e4dcc8e45053c5f8de9170a74e2641 489 Pfam PF13391 HNH endonuclease 397 443 4.4E-5 T 28-03-2018 IPR003615 HNH nuclease AM393_RS19460 fe8f152ed5aaaaa1f876b0b216a172a5 66 Pfam PF10893 Protein of unknown function (DUF2724) 1 39 1.6E-21 T 28-03-2018 IPR021221 Bacteriophage 186, Fil AM393_RS24305 8794883b25329b69a638044f8945d709 261 Gene3D G3DSA:3.40.190.10 148 259 7.6E-8 T 28-03-2018 AM393_RS24305 8794883b25329b69a638044f8945d709 261 SUPERFAMILY SSF53850 1 253 7.35E-54 T 28-03-2018 AM393_RS24305 8794883b25329b69a638044f8945d709 261 SMART SM00062 34 254 2.4E-41 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM393_RS24305 8794883b25329b69a638044f8945d709 261 Gene3D G3DSA:3.40.190.10 5 147 5.0E-31 T 28-03-2018 AM393_RS24305 8794883b25329b69a638044f8945d709 261 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 35 252 8.5E-46 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM393_RS24305 8794883b25329b69a638044f8945d709 261 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 57 70 - T 28-03-2018 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 AM393_RS13585 af2989c99247e61629ba5a4fe0653f33 183 Pfam PF12915 Protein of unknown function (DUF3833) 14 174 2.7E-67 T 28-03-2018 IPR024409 Protein of unknown function DUF3833 AM393_RS13580 c98a5b410bf92a28d4fc75bbbf29ac3c 319 Pfam PF04463 Protein of unknown function (DUF523) 7 149 3.2E-37 T 28-03-2018 IPR007553 Domain of unknown function DUF523 AM393_RS13580 c98a5b410bf92a28d4fc75bbbf29ac3c 319 Pfam PF08349 Protein of unknown function (DUF1722) 192 309 1.6E-40 T 28-03-2018 IPR013560 Domain of unknown function DUF1722 AM393_RS13580 c98a5b410bf92a28d4fc75bbbf29ac3c 319 PIRSF PIRSF037004 1 318 1.3E-133 T 28-03-2018 IPR017087 Uncharacterised conserved protein UCP037004 AM393_RS25635 7542458b3cfe4f351573faa4e3201dbb 144 Gene3D G3DSA:1.10.10.10 17 113 5.0E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS25635 7542458b3cfe4f351573faa4e3201dbb 144 Pfam PF00486 Transcriptional regulatory protein, C terminal 34 109 8.9E-9 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM393_RS25635 7542458b3cfe4f351573faa4e3201dbb 144 SUPERFAMILY SSF46894 31 110 5.1E-8 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM393_RS18800 845ad48f2721ca9aee3a75a56bfa37b3 239 TIGRFAM TIGR01528 NMN_trans_PnuC: nicotinamide mononucleotide transporter PnuC 22 231 1.2E-70 T 28-03-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 AM393_RS18800 845ad48f2721ca9aee3a75a56bfa37b3 239 Pfam PF04973 Nicotinamide mononucleotide transporter 23 226 1.2E-52 T 28-03-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 AM393_RS18040 3a7dde7eb1fcd0bd0d0885b66a8c4b0c 248 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 94 114 9.4E-67 T 28-03-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 AM393_RS18040 3a7dde7eb1fcd0bd0d0885b66a8c4b0c 248 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 159 182 9.4E-67 T 28-03-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 AM393_RS18040 3a7dde7eb1fcd0bd0d0885b66a8c4b0c 248 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 12 29 9.4E-67 T 28-03-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 AM393_RS18040 3a7dde7eb1fcd0bd0d0885b66a8c4b0c 248 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 198 217 9.4E-67 T 28-03-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 AM393_RS18040 3a7dde7eb1fcd0bd0d0885b66a8c4b0c 248 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 224 243 9.4E-67 T 28-03-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 AM393_RS18040 3a7dde7eb1fcd0bd0d0885b66a8c4b0c 248 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 74 91 9.4E-67 T 28-03-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 AM393_RS18040 3a7dde7eb1fcd0bd0d0885b66a8c4b0c 248 TIGRFAM TIGR04316 dhbA_paeA: 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase 8 247 9.4E-106 T 28-03-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 AM393_RS18040 3a7dde7eb1fcd0bd0d0885b66a8c4b0c 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 144 163 8.1E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS18040 3a7dde7eb1fcd0bd0d0885b66a8c4b0c 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 71 82 8.1E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS18040 3a7dde7eb1fcd0bd0d0885b66a8c4b0c 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 124 132 8.1E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS18040 3a7dde7eb1fcd0bd0d0885b66a8c4b0c 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 131 159 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM393_RS18040 3a7dde7eb1fcd0bd0d0885b66a8c4b0c 248 Gene3D G3DSA:3.40.50.720 41 248 1.9E-57 T 28-03-2018 AM393_RS18040 3a7dde7eb1fcd0bd0d0885b66a8c4b0c 248 Gene3D G3DSA:3.40.50.720 1 40 2.0E-6 T 28-03-2018 AM393_RS18040 3a7dde7eb1fcd0bd0d0885b66a8c4b0c 248 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 177 9.5E-4 T 28-03-2018 AM393_RS18040 3a7dde7eb1fcd0bd0d0885b66a8c4b0c 248 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 245 4.5E-51 T 28-03-2018 AM393_RS18040 3a7dde7eb1fcd0bd0d0885b66a8c4b0c 248 SUPERFAMILY SSF51735 2 245 8.21E-66 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS15835 9a78a7803a7f97eb0b64e8ba73a5d6e5 188 ProDom PD037484 CAPSID DETERMINATION SIZE HEAD GLYCOPROTEIN SID MORPHOGENESIS CP-933I ENCODED LATE 62 173 1.0E-4 T 28-03-2018 AM393_RS15835 9a78a7803a7f97eb0b64e8ba73a5d6e5 188 Pfam PF07455 Phage polarity suppression protein (Psu) 6 186 7.5E-67 T 28-03-2018 IPR010006 Bacteriophage P4, Psu, polarity suppression protein AM393_RS28065 285ed34de1e34401121b61c709f5992d 270 Pfam PF00753 Metallo-beta-lactamase superfamily 72 232 5.4E-9 T 28-03-2018 IPR001279 Metallo-beta-lactamase AM393_RS28065 285ed34de1e34401121b61c709f5992d 270 SMART SM00849 74 250 2.4E-13 T 28-03-2018 IPR001279 Metallo-beta-lactamase AM393_RS28065 285ed34de1e34401121b61c709f5992d 270 SUPERFAMILY SSF56281 51 261 7.58E-31 T 28-03-2018 IPR001279 Metallo-beta-lactamase AM393_RS28065 285ed34de1e34401121b61c709f5992d 270 Gene3D G3DSA:3.60.15.10 30 270 2.1E-34 T 28-03-2018 IPR001279 Metallo-beta-lactamase AM393_RS05605 a85bfdf91a5e872a4d4d88c870bd9b73 194 SMART SM00421 131 189 8.5E-9 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS05605 a85bfdf91a5e872a4d4d88c870bd9b73 194 Gene3D G3DSA:1.10.10.10 16 193 8.7E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS05605 a85bfdf91a5e872a4d4d88c870bd9b73 194 Pfam PF00196 Bacterial regulatory proteins, luxR family 133 181 2.7E-15 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS05605 a85bfdf91a5e872a4d4d88c870bd9b73 194 SUPERFAMILY SSF46894 127 183 3.4E-15 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM393_RS05605 a85bfdf91a5e872a4d4d88c870bd9b73 194 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 134 148 4.6E-8 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS05605 a85bfdf91a5e872a4d4d88c870bd9b73 194 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 148 164 4.6E-8 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS05605 a85bfdf91a5e872a4d4d88c870bd9b73 194 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 176 4.6E-8 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS28290 66dd0c8d81dd9426f5b3cce46656a520 110 Gene3D G3DSA:1.10.1660.10 3 109 1.6E-4 T 28-03-2018 AM393_RS04500 ca13733e800b07386a6a50d11ee66831 337 Pfam PF03824 High-affinity nickel-transport protein 41 325 4.8E-88 T 28-03-2018 IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 AM393_RS04500 ca13733e800b07386a6a50d11ee66831 337 TIGRFAM TIGR00802 nico: transition metal uptake transporter, Ni2+-Co2+ transporter (NiCoT) family 45 320 1.8E-118 T 28-03-2018 IPR004688 Transition metal uptake transporter nickel/cobalt GO:0015099|GO:0016021|GO:0035444|GO:0046872 AM393_RS20870 79d63a117458464eb1c10a1e18e87a44 399 Gene3D G3DSA:1.10.3720.10 5 382 4.4E-5 T 28-03-2018 AM393_RS20870 79d63a117458464eb1c10a1e18e87a44 399 Pfam PF12704 MacB-like periplasmic core domain 27 204 7.3E-15 T 28-03-2018 IPR025857 MacB-like periplasmic core domain AM393_RS20870 79d63a117458464eb1c10a1e18e87a44 399 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 5 399 2.1E-146 T 28-03-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 AM393_RS20870 79d63a117458464eb1c10a1e18e87a44 399 Pfam PF02687 FtsX-like permease family 296 392 8.6E-14 T 28-03-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AM393_RS05050 8f3fb52cc36276cbec7e7c5cc6ea7162 215 TIGRFAM TIGR01086 fucA: L-fuculose phosphate aldolase 2 215 1.0E-126 T 28-03-2018 IPR004782 L-fucose phosphate aldolase GO:0006004|GO:0008270|GO:0008738 KEGG: 00051+4.1.2.17|MetaCyc: PWY-5197 AM393_RS05050 8f3fb52cc36276cbec7e7c5cc6ea7162 215 Gene3D G3DSA:3.40.225.10 1 213 1.3E-59 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal AM393_RS05050 8f3fb52cc36276cbec7e7c5cc6ea7162 215 SUPERFAMILY SSF53639 1 212 1.55E-68 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal AM393_RS05050 8f3fb52cc36276cbec7e7c5cc6ea7162 215 Hamap MF_00987 L-fuculose phosphate aldolase [fucA]. 1 215 59.965 T 28-03-2018 IPR004782 L-fucose phosphate aldolase GO:0006004|GO:0008270|GO:0008738 KEGG: 00051+4.1.2.17|MetaCyc: PWY-5197 AM393_RS05050 8f3fb52cc36276cbec7e7c5cc6ea7162 215 SMART SM01007 8 182 4.2E-68 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal AM393_RS05050 8f3fb52cc36276cbec7e7c5cc6ea7162 215 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 9 182 9.2E-49 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal AM393_RS25070 15e24a9c5c678854093e0686bb042b5a 484 Pfam PF00324 Amino acid permease 35 475 1.3E-126 T 28-03-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 AM393_RS25070 15e24a9c5c678854093e0686bb042b5a 484 PIRSF PIRSF006060 23 480 9.6E-65 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AM393_RS25070 15e24a9c5c678854093e0686bb042b5a 484 ProSitePatterns PS00218 Amino acid permeases signature. 59 89 - T 28-03-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 AM393_RS13790 81c911950e45c004c39f015d6ef37908 354 PIRSF PIRSF029594 18 353 2.9E-102 T 28-03-2018 IPR016926 Uncharacterised conserved protein UCP029594 AM393_RS13790 81c911950e45c004c39f015d6ef37908 354 Pfam PF11168 Protein of unknown function (DUF2955) 25 163 8.2E-39 T 28-03-2018 IPR022604 Protein of unknown function DUF2955 AM393_RS07905 99990a1dccfcf576bdb1823beb363a7e 202 Hamap MF_01207 Protein-methionine-sulfoxide reductase heme-binding subunit MsrQ [msrQ]. 5 201 22.144 T 28-03-2018 IPR022837 Protein-methionine-sulfoxide reductase subunit MsrQ GO:0005887|GO:0030091 AM393_RS07905 99990a1dccfcf576bdb1823beb363a7e 202 Pfam PF01794 Ferric reductase like transmembrane component 48 161 8.1E-16 T 28-03-2018 IPR013130 Ferric reductase transmembrane component-like domain AM393_RS19855 8837373abadb42fbd8a88716f5682ee5 105 Gene3D G3DSA:3.30.1390.10 12 104 1.6E-37 T 28-03-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AM393_RS19855 8837373abadb42fbd8a88716f5682ee5 105 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 15 100 28.566 T 28-03-2018 IPR022935 ATP-dependent Clp protease adaptor protein ClpS AM393_RS19855 8837373abadb42fbd8a88716f5682ee5 105 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 22 101 1.3E-34 T 28-03-2018 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 AM393_RS19855 8837373abadb42fbd8a88716f5682ee5 105 SUPERFAMILY SSF54736 21 104 7.32E-34 T 28-03-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AM393_RS23980 ab0d29c67645976afcc02b8244323ef6 365 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 74 239 2.6E-8 T 28-03-2018 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 AM393_RS23980 ab0d29c67645976afcc02b8244323ef6 365 Gene3D G3DSA:3.40.50.1820 44 363 6.1E-41 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AM393_RS23980 ab0d29c67645976afcc02b8244323ef6 365 SUPERFAMILY SSF53474 251 262 1.08E-47 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AM393_RS23980 ab0d29c67645976afcc02b8244323ef6 365 SUPERFAMILY SSF53474 292 364 1.08E-47 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AM393_RS23980 ab0d29c67645976afcc02b8244323ef6 365 SUPERFAMILY SSF53474 45 206 1.08E-47 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AM393_RS15590 798a64c16672565d60537beaa5452a2c 193 Gene3D G3DSA:3.40.50.10490 1 192 4.0E-41 T 28-03-2018 AM393_RS15590 798a64c16672565d60537beaa5452a2c 193 SUPERFAMILY SSF53697 1 189 3.64E-52 T 28-03-2018 AM393_RS15590 798a64c16672565d60537beaa5452a2c 193 Pfam PF13580 SIS domain 12 146 1.2E-31 T 28-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AM393_RS15590 798a64c16672565d60537beaa5452a2c 193 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 190 38.272 T 28-03-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 AM393_RS15590 798a64c16672565d60537beaa5452a2c 193 TIGRFAM TIGR00441 gmhA: phosphoheptose isomerase 35 187 6.2E-83 T 28-03-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 AM393_RS11940 351f7ed9298c87a5299799c7dad43eb5 315 Gene3D G3DSA:1.10.10.60 1 52 9.0E-21 T 28-03-2018 AM393_RS11940 351f7ed9298c87a5299799c7dad43eb5 315 Pfam PF04198 Putative sugar-binding domain 59 315 2.3E-78 T 28-03-2018 IPR007324 Sugar-binding domain, putative GO:0030246 AM393_RS11940 351f7ed9298c87a5299799c7dad43eb5 315 SUPERFAMILY SSF100950 62 315 5.36E-63 T 28-03-2018 AM393_RS11940 351f7ed9298c87a5299799c7dad43eb5 315 Pfam PF13936 Helix-turn-helix domain 12 45 1.5E-8 T 28-03-2018 IPR025246 Transposase IS30-like HTH domain AM393_RS11940 351f7ed9298c87a5299799c7dad43eb5 315 Gene3D G3DSA:3.40.50.1360 53 315 6.3E-35 T 28-03-2018 AM393_RS11940 351f7ed9298c87a5299799c7dad43eb5 315 SUPERFAMILY SSF46689 7 53 7.7E-6 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS04220 d008ef17d5b1789c58b00ee068906099 300 Gene3D G3DSA:2.60.120.330 62 244 4.2E-43 T 28-03-2018 IPR027443 Isopenicillin N synthase-like AM393_RS04220 d008ef17d5b1789c58b00ee068906099 300 Pfam PF05118 Aspartyl/Asparaginyl beta-hydroxylase 68 222 1.2E-47 T 28-03-2018 IPR007803 Aspartyl/asparaginy/proline hydroxylase GO:0018193 AM393_RS04220 d008ef17d5b1789c58b00ee068906099 300 SUPERFAMILY SSF51197 93 222 2.64E-18 T 28-03-2018 AM393_RS28245 3cc58e5bb6c6bab07305e789c6f0afb3 730 Pfam PF12696 TraM recognition site of TraD and TraG 441 559 1.2E-5 T 28-03-2018 IPR032689 TraD/TraG, TraM recognition site AM393_RS28245 3cc58e5bb6c6bab07305e789c6f0afb3 730 SUPERFAMILY SSF52540 87 571 4.97E-27 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS28245 3cc58e5bb6c6bab07305e789c6f0afb3 730 Gene3D G3DSA:3.40.50.300 101 592 9.7E-19 T 28-03-2018 AM393_RS22435 f293cb4a651e151d26f2ba8b0a77fdde 68 Pfam PF07338 Protein of unknown function (DUF1471) 22 66 2.1E-6 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 AM393_RS22435 f293cb4a651e151d26f2ba8b0a77fdde 68 SUPERFAMILY SSF159871 17 66 5.62E-10 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 AM393_RS22435 f293cb4a651e151d26f2ba8b0a77fdde 68 Gene3D G3DSA:3.30.1660.10 17 66 4.0E-10 T 28-03-2018 IPR025543 Dodecin-like AM393_RS06425 cf540c397f5dabc2e1033f69cc480f79 132 TIGRFAM TIGR03751 conj_TIGR03751: conjugative transfer region lipoprotein, TIGR03751 family 8 128 1.6E-52 T 28-03-2018 IPR022262 Lipoprotein, putative AM393_RS28945 6b91337b7e266c6f524fc038e92e3f6b 57 Pfam PF01051 Initiator Replication protein 2 47 1.0E-8 T 28-03-2018 IPR000525 Initiator Rep protein GO:0003887|GO:0005727|GO:0006270 AM393_RS28945 6b91337b7e266c6f524fc038e92e3f6b 57 SUPERFAMILY SSF46785 3 52 1.77E-7 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS28945 6b91337b7e266c6f524fc038e92e3f6b 57 Gene3D G3DSA:1.10.10.10 1 55 1.3E-7 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS17825 f85889f0acae656a51d4f8c948492715 254 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 5 189 0.0081 T 28-03-2018 AM393_RS17825 f85889f0acae656a51d4f8c948492715 254 Gene3D G3DSA:3.40.50.720 2 243 3.2E-51 T 28-03-2018 AM393_RS17825 f85889f0acae656a51d4f8c948492715 254 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM393_RS17825 f85889f0acae656a51d4f8c948492715 254 Pfam PF00106 short chain dehydrogenase 5 192 3.0E-47 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS17825 f85889f0acae656a51d4f8c948492715 254 SUPERFAMILY SSF51735 4 235 3.38E-57 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS17825 f85889f0acae656a51d4f8c948492715 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 4.2E-6 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS17825 f85889f0acae656a51d4f8c948492715 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 4.2E-6 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS17825 f85889f0acae656a51d4f8c948492715 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 4.2E-6 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS17825 f85889f0acae656a51d4f8c948492715 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 4.9E-20 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS17825 f85889f0acae656a51d4f8c948492715 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 4.9E-20 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS17825 f85889f0acae656a51d4f8c948492715 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 4.9E-20 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS17825 f85889f0acae656a51d4f8c948492715 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 4.9E-20 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS17825 f85889f0acae656a51d4f8c948492715 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 4.9E-20 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS04450 8b967c110510dad6ec0de2d3de700be9 326 Pfam PF03612 Sorbitol phosphotransferase enzyme II N-terminus 4 178 2.3E-71 T 28-03-2018 IPR011618 Sorbitol phosphotransferase enzyme II, N-terminal GO:0008982|GO:0009401|GO:0016021 KEGG: 00051+2.7.1.198|KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 AM393_RS04450 8b967c110510dad6ec0de2d3de700be9 326 Pfam PF07663 Sorbitol phosphotransferase enzyme II C-terminus 233 325 6.1E-43 T 28-03-2018 IPR011638 Sorbitol phosphotransferase enzyme II, C-terminal GO:0008982|GO:0009401|GO:0016021 KEGG: 00051+2.7.1.198|KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 AM393_RS04450 8b967c110510dad6ec0de2d3de700be9 326 TIGRFAM TIGR00825 EIIBC-GUT: PTS system, glucitol/sorbitol-specific, IIBC component 3 326 1.9E-185 T 28-03-2018 IPR004702 Phosphotransferease, sorbitol phosphotransferase enzyme II GO:0008982|GO:0009401|GO:0016021 KEGG: 00051+2.7.1.198|KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 AM393_RS28330 ac64c5353b156aa81c56e6cc7a320478 141 Gene3D G3DSA:1.10.260.40 92 130 5.0E-4 T 28-03-2018 AM393_RS28330 ac64c5353b156aa81c56e6cc7a320478 141 Gene3D G3DSA:1.10.10.10 45 91 0.011 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS28330 ac64c5353b156aa81c56e6cc7a320478 141 Gene3D G3DSA:1.10.260.40 1 44 0.0026 T 28-03-2018 AM393_RS09585 96fd68063c7fedd67c0dc3f96e377441 143 SUPERFAMILY SSF52821 15 142 2.1E-31 T 28-03-2018 IPR001763 Rhodanese-like domain AM393_RS09585 96fd68063c7fedd67c0dc3f96e377441 143 SMART SM00450 40 138 8.2E-22 T 28-03-2018 IPR001763 Rhodanese-like domain AM393_RS09585 96fd68063c7fedd67c0dc3f96e377441 143 Pfam PF00581 Rhodanese-like domain 43 133 4.2E-17 T 28-03-2018 IPR001763 Rhodanese-like domain AM393_RS09585 96fd68063c7fedd67c0dc3f96e377441 143 Gene3D G3DSA:3.40.250.10 27 143 9.5E-25 T 28-03-2018 IPR001763 Rhodanese-like domain AM393_RS28490 af0936b9288f495712b0a35d3c1e27a4 1002 Pfam PF01526 Tn3 transposase DDE domain 587 976 3.8E-148 T 28-03-2018 IPR002513 Tn3 transposase DDE domain GO:0004803|GO:0006313 AM393_RS28490 af0936b9288f495712b0a35d3c1e27a4 1002 Pfam PF13700 Domain of unknown function (DUF4158) 5 172 1.4E-51 T 28-03-2018 IPR025296 Domain of unknown function DUF4158 AM393_RS28660 af0936b9288f495712b0a35d3c1e27a4 1002 Pfam PF01526 Tn3 transposase DDE domain 587 976 3.8E-148 T 28-03-2018 IPR002513 Tn3 transposase DDE domain GO:0004803|GO:0006313 AM393_RS28660 af0936b9288f495712b0a35d3c1e27a4 1002 Pfam PF13700 Domain of unknown function (DUF4158) 5 172 1.4E-51 T 28-03-2018 IPR025296 Domain of unknown function DUF4158 AM393_RS22415 9f521b3c836a02f128f849658790714f 237 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 182 8.8E-4 T 28-03-2018 AM393_RS22415 9f521b3c836a02f128f849658790714f 237 SUPERFAMILY SSF51735 6 234 4.25E-66 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS22415 9f521b3c836a02f128f849658790714f 237 Gene3D G3DSA:3.40.50.720 1 39 2.3E-6 T 28-03-2018 AM393_RS22415 9f521b3c836a02f128f849658790714f 237 Gene3D G3DSA:3.40.50.720 40 237 3.7E-52 T 28-03-2018 AM393_RS22415 9f521b3c836a02f128f849658790714f 237 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 233 6.4E-53 T 28-03-2018 AM393_RS22415 9f521b3c836a02f128f849658790714f 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 74 85 6.0E-35 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS22415 9f521b3c836a02f128f849658790714f 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 6.0E-35 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS22415 9f521b3c836a02f128f849658790714f 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 6.0E-35 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS22415 9f521b3c836a02f128f849658790714f 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 6.0E-35 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS22415 9f521b3c836a02f128f849658790714f 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 135 6.0E-35 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS22415 9f521b3c836a02f128f849658790714f 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 199 219 6.0E-35 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS22415 9f521b3c836a02f128f849658790714f 237 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 165 2.8E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS22415 9f521b3c836a02f128f849658790714f 237 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 125 133 2.8E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS22415 9f521b3c836a02f128f849658790714f 237 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 74 85 2.8E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS22845 a4d7e46435aaae4d877efc1abc92c764 117 Pfam PF06993 Protein of unknown function (DUF1304) 8 114 2.3E-42 T 28-03-2018 IPR009732 Protein of unknown function DUF1304 AM393_RS06375 3233163525baae76abb2ec50f1e8dd52 313 TIGRFAM TIGR03756 conj_TIGR03756: integrating conjugative element protein, PFL_4710 family 25 309 6.6E-122 T 28-03-2018 IPR026331 Integrating conjugative element protein PFL_4710 AM393_RS06375 3233163525baae76abb2ec50f1e8dd52 313 Pfam PF06834 TraU protein 32 298 7.3E-68 T 28-03-2018 IPR009649 TraU AM393_RS02550 3be1f43668f222094f802aacff1feabb 392 SUPERFAMILY SSF46548 6 83 2.96E-16 T 28-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AM393_RS02550 3be1f43668f222094f802aacff1feabb 392 Gene3D G3DSA:3.30.70.20 4 61 2.3E-8 T 28-03-2018 AM393_RS02550 3be1f43668f222094f802aacff1feabb 392 Pfam PF02754 Cysteine-rich domain 289 372 1.9E-13 T 28-03-2018 IPR004017 Cysteine-rich domain AM393_RS02550 3be1f43668f222094f802aacff1feabb 392 Pfam PF02754 Cysteine-rich domain 163 245 1.5E-16 T 28-03-2018 IPR004017 Cysteine-rich domain AM393_RS02550 3be1f43668f222094f802aacff1feabb 392 TIGRFAM TIGR03379 glycerol3P_GlpC: glycerol-3-phosphate dehydrogenase, anaerobic, C subunit 3 391 4.3E-217 T 28-03-2018 IPR017753 Glycerol-3-phosphate dehydrogenase, GlpC subunit GO:0006810|GO:0016020 AM393_RS02550 3be1f43668f222094f802aacff1feabb 392 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 56 67 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM393_RS02550 3be1f43668f222094f802aacff1feabb 392 Pfam PF13183 4Fe-4S dicluster domain 6 70 2.1E-10 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM393_RS02550 3be1f43668f222094f802aacff1feabb 392 Gene3D G3DSA:3.30.70.20 62 384 2.1E-4 T 28-03-2018 AM393_RS03745 bcaafedf5e5afe934ec0e8fc1f5d7a10 211 SUPERFAMILY SSF56784 7 170 4.07E-10 T 28-03-2018 IPR023214 HAD-like domain AM393_RS03745 bcaafedf5e5afe934ec0e8fc1f5d7a10 211 Pfam PF12710 haloacid dehalogenase-like hydrolase 9 192 1.2E-11 T 28-03-2018 AM393_RS03745 bcaafedf5e5afe934ec0e8fc1f5d7a10 211 Gene3D G3DSA:3.40.50.1000 1 150 3.8E-7 T 28-03-2018 IPR023214 HAD-like domain AM393_RS03745 bcaafedf5e5afe934ec0e8fc1f5d7a10 211 TIGRFAM TIGR01545 YfhB_g-proteo: HAD hydrolase, family IF 4 211 2.6E-117 T 28-03-2018 IPR006435 HAD-superfamily hydrolase, subfamily IF, YfhB KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 AM393_RS06195 2172edcdab71ec024a9b1be0dfb4543d 233 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 79 93 - T 28-03-2018 IPR011078 Pyridoxal phosphate homeostasis protein AM393_RS06195 2172edcdab71ec024a9b1be0dfb4543d 233 Gene3D G3DSA:3.20.20.10 1 233 7.3E-70 T 28-03-2018 IPR029066 PLP-binding barrel AM393_RS06195 2172edcdab71ec024a9b1be0dfb4543d 233 Pfam PF01168 Alanine racemase, N-terminal domain 4 229 4.1E-31 T 28-03-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM393_RS06195 2172edcdab71ec024a9b1be0dfb4543d 233 PIRSF PIRSF004848 1 233 6.5E-74 T 28-03-2018 IPR011078 Pyridoxal phosphate homeostasis protein AM393_RS06195 2172edcdab71ec024a9b1be0dfb4543d 233 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 1 229 1.7E-98 T 28-03-2018 IPR011078 Pyridoxal phosphate homeostasis protein AM393_RS06195 2172edcdab71ec024a9b1be0dfb4543d 233 SUPERFAMILY SSF51419 1 227 9.42E-80 T 28-03-2018 IPR029066 PLP-binding barrel AM393_RS12035 0b3714ab72aa8bc13d6240c177d4f8d7 429 SUPERFAMILY SSF56935 26 429 1.05E-149 T 28-03-2018 AM393_RS12035 0b3714ab72aa8bc13d6240c177d4f8d7 429 Pfam PF02264 LamB porin 28 429 8.7E-145 T 28-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 AM393_RS12035 0b3714ab72aa8bc13d6240c177d4f8d7 429 Gene3D G3DSA:2.40.170.10 26 429 2.4E-155 T 28-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 AM393_RS12035 0b3714ab72aa8bc13d6240c177d4f8d7 429 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 32 425 0.0 T 28-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 AM393_RS12035 0b3714ab72aa8bc13d6240c177d4f8d7 429 Hamap MF_01301 Maltoporin [lamB]. 4 429 42.653 T 28-03-2018 IPR023738 Maltoporin GO:0009279|GO:0015481|GO:0015768|GO:0042956|GO:0042958 AM393_RS28000 9373cc0789f4cd74e214917eb983e835 185 Gene3D G3DSA:3.40.30.10 47 184 1.2E-8 T 28-03-2018 AM393_RS28000 9373cc0789f4cd74e214917eb983e835 185 SUPERFAMILY SSF52833 80 178 5.23E-10 T 28-03-2018 IPR012336 Thioredoxin-like fold AM393_RS28000 9373cc0789f4cd74e214917eb983e835 185 Pfam PF13728 F plasmid transfer operon protein 82 168 1.5E-11 T 28-03-2018 AM393_RS28000 9373cc0789f4cd74e214917eb983e835 185 TIGRFAM TIGR02738 TrbB: type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB 16 180 1.5E-56 T 28-03-2018 IPR014109 Type-F conjugative transfer system pilin assembly thiol-disulphide isomerase TrbB AM393_RS16260 de01e6ff4a473a897b118b629fa68992 110 SMART SM01323 19 102 2.4E-37 T 28-03-2018 IPR003849 Preprotein translocase YajC AM393_RS16260 de01e6ff4a473a897b118b629fa68992 110 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 19 102 2.9E-34 T 28-03-2018 IPR003849 Preprotein translocase YajC AM393_RS16260 de01e6ff4a473a897b118b629fa68992 110 Pfam PF02699 Preprotein translocase subunit 22 99 1.9E-26 T 28-03-2018 IPR003849 Preprotein translocase YajC AM393_RS16260 de01e6ff4a473a897b118b629fa68992 110 PRINTS PR01853 Bacterial YajC preprotein translocase signature 59 77 3.1E-17 T 28-03-2018 IPR003849 Preprotein translocase YajC AM393_RS16260 de01e6ff4a473a897b118b629fa68992 110 PRINTS PR01853 Bacterial YajC preprotein translocase signature 21 41 3.1E-17 T 28-03-2018 IPR003849 Preprotein translocase YajC AM393_RS00470 2337d795df3212236d7b6564f2759e08 47 Hamap MF_01596 PhoP/PhoQ regulator MgrB [mgrB]. 1 47 19.345 T 28-03-2018 IPR020907 PhoP/PhoQ regulator MgrB AM393_RS00470 2337d795df3212236d7b6564f2759e08 47 Pfam PF13998 MgrB protein 19 47 9.6E-18 T 28-03-2018 IPR020907 PhoP/PhoQ regulator MgrB AM393_RS07145 1f5582069d1ebb99cda0a16a1ff3922b 673 SUPERFAMILY SSF51395 3 363 2.62E-108 T 28-03-2018 AM393_RS07145 1f5582069d1ebb99cda0a16a1ff3922b 673 Gene3D G3DSA:3.50.50.60 480 626 4.5E-36 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS07145 1f5582069d1ebb99cda0a16a1ff3922b 673 SUPERFAMILY SSF51905 557 651 6.79E-24 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS07145 1f5582069d1ebb99cda0a16a1ff3922b 673 SUPERFAMILY SSF51905 462 519 6.79E-24 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS07145 1f5582069d1ebb99cda0a16a1ff3922b 673 Gene3D G3DSA:3.20.20.70 3 370 1.6E-109 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM393_RS07145 1f5582069d1ebb99cda0a16a1ff3922b 673 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 6 331 1.6E-96 T 28-03-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 AM393_RS07145 1f5582069d1ebb99cda0a16a1ff3922b 673 Gene3D G3DSA:3.40.50.720 371 479 4.1E-23 T 28-03-2018 AM393_RS07145 1f5582069d1ebb99cda0a16a1ff3922b 673 SUPERFAMILY SSF51971 334 520 1.12E-41 T 28-03-2018 AM393_RS07145 1f5582069d1ebb99cda0a16a1ff3922b 673 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 377 399 2.7E-5 T 28-03-2018 AM393_RS07145 1f5582069d1ebb99cda0a16a1ff3922b 673 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 620 634 2.7E-5 T 28-03-2018 AM393_RS07145 1f5582069d1ebb99cda0a16a1ff3922b 673 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 498 516 3.4E-11 T 28-03-2018 AM393_RS07145 1f5582069d1ebb99cda0a16a1ff3922b 673 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 619 635 3.4E-11 T 28-03-2018 AM393_RS07145 1f5582069d1ebb99cda0a16a1ff3922b 673 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 378 397 3.4E-11 T 28-03-2018 AM393_RS07145 1f5582069d1ebb99cda0a16a1ff3922b 673 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 377 653 5.8E-23 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS28270 2506d71cc3e23ba62392419eee6edb1e 85 Pfam PF13091 PLD-like domain 4 75 6.5E-13 T 28-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 AM393_RS28270 2506d71cc3e23ba62392419eee6edb1e 85 SUPERFAMILY SSF56024 3 81 1.7E-17 T 28-03-2018 AM393_RS28270 2506d71cc3e23ba62392419eee6edb1e 85 SMART SM00155 19 46 0.0031 T 28-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AM393_RS28270 2506d71cc3e23ba62392419eee6edb1e 85 Gene3D G3DSA:3.30.870.10 2 85 2.1E-14 T 28-03-2018 AM393_RS16635 cbf31717bd9be51eafcf1139b7cebd38 400 SUPERFAMILY SSF51445 15 399 1.12E-103 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily AM393_RS16635 cbf31717bd9be51eafcf1139b7cebd38 400 Pfam PF07745 Glycosyl hydrolase family 53 40 399 6.9E-125 T 28-03-2018 IPR011683 Glycosyl hydrolase family 53 GO:0015926 AM393_RS16635 cbf31717bd9be51eafcf1139b7cebd38 400 Gene3D G3DSA:3.20.20.80 37 400 2.3E-76 T 28-03-2018 AM393_RS01810 14df057bb6801a884501d3430875e4e4 378 Pfam PF10531 SLBB domain 173 220 2.6E-8 T 28-03-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM393_RS01810 14df057bb6801a884501d3430875e4e4 378 Pfam PF10531 SLBB domain 256 309 0.0022 T 28-03-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM393_RS01810 14df057bb6801a884501d3430875e4e4 378 Gene3D G3DSA:1.20.5.70 345 374 1.5E-17 T 28-03-2018 AM393_RS01810 14df057bb6801a884501d3430875e4e4 378 Gene3D G3DSA:3.30.1950.10 89 160 3.1E-26 T 28-03-2018 AM393_RS01810 14df057bb6801a884501d3430875e4e4 378 Gene3D G3DSA:3.10.560.10 252 344 7.3E-18 T 28-03-2018 AM393_RS01810 14df057bb6801a884501d3430875e4e4 378 Gene3D G3DSA:3.10.560.10 161 251 1.9E-24 T 28-03-2018 AM393_RS01810 14df057bb6801a884501d3430875e4e4 378 Pfam PF02563 Polysaccharide biosynthesis/export protein 82 165 3.9E-28 T 28-03-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 AM393_RS16240 64a061f071e2c21400f32ca004cd9691 200 Pfam PF00578 AhpC/TSA family 5 139 4.2E-35 T 28-03-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AM393_RS16240 64a061f071e2c21400f32ca004cd9691 200 Gene3D G3DSA:3.30.1020.10 162 198 3.4E-15 T 28-03-2018 AM393_RS16240 64a061f071e2c21400f32ca004cd9691 200 PIRSF PIRSF000239 1 198 9.4E-59 T 28-03-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AM393_RS16240 64a061f071e2c21400f32ca004cd9691 200 Gene3D G3DSA:3.40.30.10 3 161 4.2E-40 T 28-03-2018 AM393_RS16240 64a061f071e2c21400f32ca004cd9691 200 SUPERFAMILY SSF52833 1 193 1.36E-66 T 28-03-2018 IPR012336 Thioredoxin-like fold AM393_RS16240 64a061f071e2c21400f32ca004cd9691 200 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 160 194 2.2E-12 T 28-03-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AM393_RS00510 659877818b3f022a1564d7c632cc2422 427 Pfam PF04403 Paraquat-inducible protein A 68 217 3.8E-36 T 28-03-2018 IPR007498 Paraquat-inducible protein A AM393_RS00510 659877818b3f022a1564d7c632cc2422 427 Pfam PF04403 Paraquat-inducible protein A 263 418 5.0E-43 T 28-03-2018 IPR007498 Paraquat-inducible protein A AM393_RS00510 659877818b3f022a1564d7c632cc2422 427 TIGRFAM TIGR00155 pqiA_fam: integral membrane protein, PqiA family 19 417 6.6E-182 T 28-03-2018 IPR005219 Conserved hypothetical protein CHP00155 AM393_RS00510 659877818b3f022a1564d7c632cc2422 427 Gene3D G3DSA:1.20.1070.10 115 353 1.6E-4 T 28-03-2018 AM393_RS00510 659877818b3f022a1564d7c632cc2422 427 SUPERFAMILY SSF48695 212 260 5.59E-6 T 28-03-2018 IPR011031 Multihaem cytochrome AM393_RS04975 3f8e281a4c7777654c10e0d6807d086c 429 TIGRFAM TIGR00814 stp: serine transporter 18 418 9.7E-184 T 28-03-2018 IPR004694 Hydroxy amino acid transporter GO:0005215|GO:0006810|GO:0016021 AM393_RS22290 5ec798112d1192238dc078fe69954cf3 82 Gene3D G3DSA:3.30.910.10 1 80 1.4E-27 T 28-03-2018 IPR010391 DNA damage-inducible protein DinI-like AM393_RS22290 5ec798112d1192238dc078fe69954cf3 82 Pfam PF06183 DinI-like family 16 80 1.2E-15 T 28-03-2018 IPR010391 DNA damage-inducible protein DinI-like AM393_RS22290 5ec798112d1192238dc078fe69954cf3 82 SUPERFAMILY SSF54857 1 81 3.14E-22 T 28-03-2018 IPR010391 DNA damage-inducible protein DinI-like AM393_RS19170 90c7334765b1954b64c389e5461fa22b 322 Gene3D G3DSA:3.40.1030.10 80 322 6.8E-39 T 28-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AM393_RS19170 90c7334765b1954b64c389e5461fa22b 322 Gene3D G3DSA:1.20.970.10 1 71 1.5E-15 T 28-03-2018 AM393_RS19170 90c7334765b1954b64c389e5461fa22b 322 SUPERFAMILY SSF47648 7 72 4.19E-13 T 28-03-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 AM393_RS19170 90c7334765b1954b64c389e5461fa22b 322 Pfam PF02885 Glycosyl transferase family, helical bundle domain 5 69 1.0E-8 T 28-03-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 AM393_RS19170 90c7334765b1954b64c389e5461fa22b 322 SUPERFAMILY SSF52418 75 322 4.97E-47 T 28-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AM393_RS02685 5aa2aca82abfc92a120e297830ab790c 166 Gene3D G3DSA:3.40.30.10 84 166 6.4E-13 T 28-03-2018 AM393_RS02685 5aa2aca82abfc92a120e297830ab790c 166 ProSitePatterns PS01099 Respiratory-chain NADH dehydrogenase 24 Kd subunit signature. 123 141 - T 28-03-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM393_RS02685 5aa2aca82abfc92a120e297830ab790c 166 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 24 166 9.0E-51 T 28-03-2018 AM393_RS02685 5aa2aca82abfc92a120e297830ab790c 166 PIRSF PIRSF000216 1 166 1.5E-54 T 28-03-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM393_RS02685 5aa2aca82abfc92a120e297830ab790c 166 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 22 166 5.4E-53 T 28-03-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM393_RS02685 5aa2aca82abfc92a120e297830ab790c 166 SUPERFAMILY SSF52833 16 165 4.36E-50 T 28-03-2018 IPR012336 Thioredoxin-like fold AM393_RS13730 b02e621b30a576c3bb54782986a945ee 335 Pfam PF00579 tRNA synthetases class I (W and Y) 3 286 2.0E-52 T 28-03-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM393_RS13730 b02e621b30a576c3bb54782986a945ee 335 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 13 22 - T 28-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM393_RS13730 b02e621b30a576c3bb54782986a945ee 335 Gene3D G3DSA:3.40.50.620 3 204 5.4E-57 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM393_RS13730 b02e621b30a576c3bb54782986a945ee 335 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 68 87 1.1E-20 T 28-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AM393_RS13730 b02e621b30a576c3bb54782986a945ee 335 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 146 167 1.1E-20 T 28-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AM393_RS13730 b02e621b30a576c3bb54782986a945ee 335 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 198 208 1.1E-20 T 28-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AM393_RS13730 b02e621b30a576c3bb54782986a945ee 335 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 17 33 1.1E-20 T 28-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AM393_RS13730 b02e621b30a576c3bb54782986a945ee 335 Gene3D G3DSA:1.10.240.10 205 327 2.4E-27 T 28-03-2018 AM393_RS13730 b02e621b30a576c3bb54782986a945ee 335 SUPERFAMILY SSF52374 4 331 4.5E-77 T 28-03-2018 AM393_RS13730 b02e621b30a576c3bb54782986a945ee 335 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 4 331 1.3E-68 T 28-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AM393_RS11320 f66553536b839adbc5b5a01b720f47fa 224 SUPERFAMILY SSF55729 43 208 1.79E-13 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM393_RS11320 f66553536b839adbc5b5a01b720f47fa 224 TIGRFAM TIGR02382 wecD_rffC: TDP-D-fucosamine acetyltransferase 44 224 8.8E-84 T 28-03-2018 IPR012752 dTDP-fucosamine acetyltransferase WecD GO:0008080|GO:0009246 KEGG: 00071+2.3.1.21|MetaCyc: PWY-6111|MetaCyc: PWY-7315 AM393_RS11320 f66553536b839adbc5b5a01b720f47fa 224 Hamap MF_02027 dTDP-fucosamine acetyltransferase [wecD]. 44 224 43.143 T 28-03-2018 IPR012752 dTDP-fucosamine acetyltransferase WecD GO:0008080|GO:0009246 KEGG: 00071+2.3.1.21|MetaCyc: PWY-6111|MetaCyc: PWY-7315 AM393_RS11320 f66553536b839adbc5b5a01b720f47fa 224 Gene3D G3DSA:3.40.630.30 87 224 3.2E-9 T 28-03-2018 AM393_RS11210 1fc14824e0e24b5cbc0062b0ffd28df6 616 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 610 45.466 T 28-03-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AM393_RS11210 1fc14824e0e24b5cbc0062b0ffd28df6 616 Pfam PF00920 Dehydratase family 34 607 1.5E-220 T 28-03-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AM393_RS11210 1fc14824e0e24b5cbc0062b0ffd28df6 616 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 28-03-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AM393_RS11210 1fc14824e0e24b5cbc0062b0ffd28df6 616 SUPERFAMILY SSF52016 421 610 5.34E-61 T 28-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AM393_RS11210 1fc14824e0e24b5cbc0062b0ffd28df6 616 SUPERFAMILY SSF143975 3 420 8.76E-135 T 28-03-2018 AM393_RS11210 1fc14824e0e24b5cbc0062b0ffd28df6 616 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 509 520 - T 28-03-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AM393_RS11210 1fc14824e0e24b5cbc0062b0ffd28df6 616 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 610 5.1E-274 T 28-03-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AM393_RS11210 1fc14824e0e24b5cbc0062b0ffd28df6 616 Gene3D G3DSA:3.40.50.2300 51 173 0.0062 T 28-03-2018 AM393_RS06455 8c9767bb06ed3406e57256733c957d18 78 Pfam PF11660 Protein of unknown function (DUF3262) 1 77 3.7E-24 T 28-03-2018 IPR021676 Protein of unknown function DUF3262 AM393_RS06455 8c9767bb06ed3406e57256733c957d18 78 TIGRFAM TIGR03758 conj_TIGR03758: integrating conjugative element protein, PFL_4701 family 2 78 1.8E-23 T 28-03-2018 IPR021676 Protein of unknown function DUF3262 AM393_RS11235 1b8f51faddc7ef2ef1115894f804563c 93 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 31 51 - T 28-03-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 AM393_RS11235 1b8f51faddc7ef2ef1115894f804563c 93 Gene3D G3DSA:3.10.50.40 2 90 1.7E-28 T 28-03-2018 AM393_RS11235 1b8f51faddc7ef2ef1115894f804563c 93 SUPERFAMILY SSF54534 5 90 1.05E-25 T 28-03-2018 AM393_RS11235 1b8f51faddc7ef2ef1115894f804563c 93 Pfam PF13616 PPIC-type PPIASE domain 14 90 1.5E-20 T 28-03-2018 AM393_RS03430 c32afe6f03c0e01fe7d0892fa92d4228 208 Pfam PF14681 Uracil phosphoribosyltransferase 7 207 7.6E-65 T 28-03-2018 AM393_RS03430 c32afe6f03c0e01fe7d0892fa92d4228 208 SUPERFAMILY SSF53271 4 206 4.46E-66 T 28-03-2018 IPR029057 Phosphoribosyltransferase-like AM393_RS03430 c32afe6f03c0e01fe7d0892fa92d4228 208 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 2 208 44.381 T 28-03-2018 IPR034332 Uracil phosphoribosyltransferase, bacterial-type KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 AM393_RS03430 c32afe6f03c0e01fe7d0892fa92d4228 208 Gene3D G3DSA:3.40.50.2020 1 206 5.5E-60 T 28-03-2018 AM393_RS03430 c32afe6f03c0e01fe7d0892fa92d4228 208 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 3 208 2.4E-90 T 28-03-2018 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 AM393_RS23040 c966ffc3f798170c6d93ca7772847a3d 129 TIGRFAM TIGR02425 decarb_PcaC: 4-carboxymuconolactone decarboxylase 4 124 2.7E-54 T 28-03-2018 IPR012788 4-carboxymuconolactone decarboxylase KEGG: 00362+4.1.1.44 AM393_RS23040 c966ffc3f798170c6d93ca7772847a3d 129 Gene3D G3DSA:1.20.1290.10 8 128 3.8E-35 T 28-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AM393_RS23040 c966ffc3f798170c6d93ca7772847a3d 129 SUPERFAMILY SSF69118 5 123 3.14E-37 T 28-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AM393_RS23040 c966ffc3f798170c6d93ca7772847a3d 129 Pfam PF02627 Carboxymuconolactone decarboxylase family 36 118 1.2E-23 T 28-03-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AM393_RS24280 4decc2c5cfc5a182d83e3d3f036f12cd 419 SUPERFAMILY SSF53187 13 231 2.01E-78 T 28-03-2018 AM393_RS24280 4decc2c5cfc5a182d83e3d3f036f12cd 419 SUPERFAMILY SSF53187 344 417 2.01E-78 T 28-03-2018 AM393_RS24280 4decc2c5cfc5a182d83e3d3f036f12cd 419 Gene3D G3DSA:3.40.630.10 252 419 2.8E-18 T 28-03-2018 AM393_RS24280 4decc2c5cfc5a182d83e3d3f036f12cd 419 Pfam PF07687 Peptidase dimerisation domain 221 317 2.1E-4 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain AM393_RS24280 4decc2c5cfc5a182d83e3d3f036f12cd 419 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 32 403 2.3E-117 T 28-03-2018 IPR010158 Amidase, carbamoylase-type GO:0008152|GO:0016813 AM393_RS24280 4decc2c5cfc5a182d83e3d3f036f12cd 419 SUPERFAMILY SSF55031 221 336 2.99E-26 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain AM393_RS24280 4decc2c5cfc5a182d83e3d3f036f12cd 419 Pfam PF01546 Peptidase family M20/M25/M40 85 414 4.6E-27 T 28-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 AM393_RS24280 4decc2c5cfc5a182d83e3d3f036f12cd 419 Gene3D G3DSA:3.40.630.10 9 251 1.5E-39 T 28-03-2018 AM393_RS24280 4decc2c5cfc5a182d83e3d3f036f12cd 419 PIRSF PIRSF001235 10 419 3.3E-132 T 28-03-2018 IPR010158 Amidase, carbamoylase-type GO:0008152|GO:0016813 AM393_RS02135 1ef9fc1a9c9fdd13c0910a419a77f643 231 TIGRFAM TIGR00659 TIGR00659: TIGR00659 family protein 2 226 3.1E-107 T 28-03-2018 IPR005261 Conserved hypothetical protein CHP00659 AM393_RS02135 1ef9fc1a9c9fdd13c0910a419a77f643 231 Pfam PF04172 LrgB-like family 12 224 8.8E-80 T 28-03-2018 IPR007300 CidB/LrgB family AM393_RS01145 3562506cdecbf681c257245491b6512c 150 Gene3D G3DSA:1.10.10.10 7 88 2.3E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS01145 3562506cdecbf681c257245491b6512c 150 Pfam PF01475 Ferric uptake regulator family 18 120 1.3E-9 T 28-03-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 AM393_RS01145 3562506cdecbf681c257245491b6512c 150 SUPERFAMILY SSF46785 10 143 5.34E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS05200 46ba882eb1299d9c7235b107f5f1e3a1 189 SUPERFAMILY SSF53335 3 156 1.44E-26 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM393_RS05200 46ba882eb1299d9c7235b107f5f1e3a1 189 Gene3D G3DSA:3.40.50.150 2 189 2.2E-27 T 28-03-2018 AM393_RS05200 46ba882eb1299d9c7235b107f5f1e3a1 189 Pfam PF05175 Methyltransferase small domain 23 130 2.9E-8 T 28-03-2018 IPR007848 Methyltransferase small domain GO:0008168 AM393_RS05200 46ba882eb1299d9c7235b107f5f1e3a1 189 TIGRFAM TIGR02469 CbiT: precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit 13 132 2.0E-40 T 28-03-2018 IPR014008 Cobalamin biosynthesis, precorrin-6Y methyltransferase, CbiT subunit GO:0008276|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.196|MetaCyc: PWY-2201|MetaCyc: PWY-7377 AM393_RS25640 9782ef7592951922b7f0afa2843591a5 238 Gene3D G3DSA:1.10.10.10 79 199 6.5E-4 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS18385 f8b97b9053aae6827ae487a2caebedde 246 Gene3D G3DSA:1.10.3720.10 17 239 2.8E-38 T 28-03-2018 AM393_RS18385 f8b97b9053aae6827ae487a2caebedde 246 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 47 238 4.9E-26 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS18385 f8b97b9053aae6827ae487a2caebedde 246 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 23 132 1.3E-15 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AM393_RS18385 f8b97b9053aae6827ae487a2caebedde 246 SUPERFAMILY SSF161098 24 223 1.7E-37 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS23885 8581a72953b056337c9e38d1f87af88b 385 Gene3D G3DSA:1.10.10.60 282 348 2.0E-4 T 28-03-2018 AM393_RS23885 8581a72953b056337c9e38d1f87af88b 385 Gene3D G3DSA:3.30.450.40 12 120 0.0029 T 28-03-2018 IPR029016 GAF domain-like AM393_RS23885 8581a72953b056337c9e38d1f87af88b 385 Pfam PF13556 PucR C-terminal helix-turn-helix domain 311 367 1.9E-12 T 28-03-2018 IPR025736 PucR C-terminal helix-turn-helix domain AM393_RS23885 8581a72953b056337c9e38d1f87af88b 385 Pfam PF05651 Putative sugar diacid recognition 4 135 1.1E-41 T 28-03-2018 IPR008599 Putative sugar diacid recognition AM393_RS16230 052d5a63db948c76c36e7dfe3c38b32d 95 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 4 71 9.0E-14 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AM393_RS16230 052d5a63db948c76c36e7dfe3c38b32d 95 Gene3D G3DSA:3.40.50.2300 2 92 4.1E-14 T 28-03-2018 AM393_RS16230 052d5a63db948c76c36e7dfe3c38b32d 95 SUPERFAMILY SSF52794 4 86 1.2E-16 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AM393_RS27385 b3ce87b500f25631007bdae27978b645 180 Pfam PF01610 Transposase 5 134 1.1E-28 T 28-03-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain AM393_RS15765 6cbf372f53c131fdc3ed8a75c6b01c00 83 Pfam PF12674 Putative zinc ribbon domain 7 77 1.7E-9 T 28-03-2018 IPR025868 Putative zinc ribbon domain AM393_RS15765 6cbf372f53c131fdc3ed8a75c6b01c00 83 Gene3D G3DSA:1.20.910.10 1 83 2.1E-4 T 28-03-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 AM393_RS01520 9df150f67d0b70b6877cb2c7d24d7e52 111 Pfam PF08956 Domain of unknown function (DUF1869) 54 111 1.9E-34 T 28-03-2018 IPR015051 Protein YoaG AM393_RS01520 9df150f67d0b70b6877cb2c7d24d7e52 111 SUPERFAMILY SSF103063 55 111 3.14E-23 T 28-03-2018 IPR015051 Protein YoaG AM393_RS01520 9df150f67d0b70b6877cb2c7d24d7e52 111 Gene3D G3DSA:3.30.160.220 56 106 8.6E-27 T 28-03-2018 IPR015051 Protein YoaG AM393_RS01520 9df150f67d0b70b6877cb2c7d24d7e52 111 Gene3D G3DSA:3.30.160.220 5 55 3.4E-19 T 28-03-2018 IPR015051 Protein YoaG AM393_RS23795 d7a093832bd0e33d578b0b28a1ec804b 231 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 96 113 - T 28-03-2018 IPR018046 Pili assembly chaperone, conserved site AM393_RS23795 d7a093832bd0e33d578b0b28a1ec804b 231 SUPERFAMILY SSF49584 142 224 2.09E-17 T 28-03-2018 IPR016148 Pili assembly chaperone, C-terminal AM393_RS23795 d7a093832bd0e33d578b0b28a1ec804b 231 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 163 222 6.1E-13 T 28-03-2018 IPR016148 Pili assembly chaperone, C-terminal AM393_RS23795 d7a093832bd0e33d578b0b28a1ec804b 231 Gene3D G3DSA:2.60.40.10 143 231 4.9E-21 T 28-03-2018 IPR013783 Immunoglobulin-like fold AM393_RS23795 d7a093832bd0e33d578b0b28a1ec804b 231 Gene3D G3DSA:2.60.40.10 24 138 6.2E-34 T 28-03-2018 IPR013783 Immunoglobulin-like fold AM393_RS23795 d7a093832bd0e33d578b0b28a1ec804b 231 SUPERFAMILY SSF49354 18 140 1.02E-38 T 28-03-2018 IPR008962 PapD-like AM393_RS23795 d7a093832bd0e33d578b0b28a1ec804b 231 PRINTS PR00969 Pili chaperone signature 157 172 3.7E-33 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM393_RS23795 d7a093832bd0e33d578b0b28a1ec804b 231 PRINTS PR00969 Pili chaperone signature 122 137 3.7E-33 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM393_RS23795 d7a093832bd0e33d578b0b28a1ec804b 231 PRINTS PR00969 Pili chaperone signature 24 33 3.7E-33 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM393_RS23795 d7a093832bd0e33d578b0b28a1ec804b 231 PRINTS PR00969 Pili chaperone signature 69 90 3.7E-33 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM393_RS23795 d7a093832bd0e33d578b0b28a1ec804b 231 PRINTS PR00969 Pili chaperone signature 97 114 3.7E-33 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM393_RS23795 d7a093832bd0e33d578b0b28a1ec804b 231 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 23 140 3.4E-41 T 28-03-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 AM393_RS08935 f5b48440d14e4fc9e8a5bf4723eacf1a 208 Pfam PF07947 YhhN family 27 205 3.2E-41 T 28-03-2018 IPR012506 YhhN-like GO:0016021 AM393_RS25110 fe4fcc839c0470d72d9191b99aac1209 345 Pfam PF16884 N-terminal domain of oxidoreductase 9 115 2.9E-44 T 28-03-2018 AM393_RS25110 fe4fcc839c0470d72d9191b99aac1209 345 SUPERFAMILY SSF50129 296 340 4.38E-5 T 28-03-2018 IPR011032 GroES-like AM393_RS25110 fe4fcc839c0470d72d9191b99aac1209 345 SUPERFAMILY SSF51735 127 306 2.09E-44 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS25110 fe4fcc839c0470d72d9191b99aac1209 345 Gene3D G3DSA:3.40.50.720 152 282 2.3E-27 T 28-03-2018 AM393_RS25110 fe4fcc839c0470d72d9191b99aac1209 345 SUPERFAMILY SSF50129 8 146 2.02E-46 T 28-03-2018 IPR011032 GroES-like AM393_RS25110 fe4fcc839c0470d72d9191b99aac1209 345 SMART SM00829 22 339 3.7E-5 T 28-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AM393_RS25110 fe4fcc839c0470d72d9191b99aac1209 345 Gene3D G3DSA:3.90.180.10 2 151 6.2E-35 T 28-03-2018 AM393_RS25110 fe4fcc839c0470d72d9191b99aac1209 345 Pfam PF00107 Zinc-binding dehydrogenase 161 297 7.2E-19 T 28-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AM393_RS17355 4cb82bd37752e5a6b88db773b9486df7 522 Gene3D G3DSA:1.10.10.10 2 106 9.2E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS17355 4cb82bd37752e5a6b88db773b9486df7 522 Gene3D G3DSA:1.25.40.10 361 520 5.2E-12 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM393_RS17355 4cb82bd37752e5a6b88db773b9486df7 522 SUPERFAMILY SSF46894 4 102 1.25E-18 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM393_RS17355 4cb82bd37752e5a6b88db773b9486df7 522 SMART SM00862 24 100 6.0E-18 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM393_RS17355 4cb82bd37752e5a6b88db773b9486df7 522 SUPERFAMILY SSF48452 427 495 8.13E-5 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM393_RS17355 4cb82bd37752e5a6b88db773b9486df7 522 SUPERFAMILY SSF48452 344 384 8.13E-5 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM393_RS17355 4cb82bd37752e5a6b88db773b9486df7 522 Pfam PF00486 Transcriptional regulatory protein, C terminal 24 100 2.0E-18 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM393_RS14020 167865f69d9a6db8e91fe6e9a68a8523 340 SUPERFAMILY SSF50129 3 172 3.8E-53 T 28-03-2018 IPR011032 GroES-like AM393_RS14020 167865f69d9a6db8e91fe6e9a68a8523 340 Pfam PF00107 Zinc-binding dehydrogenase 173 299 7.9E-21 T 28-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AM393_RS14020 167865f69d9a6db8e91fe6e9a68a8523 340 SMART SM00829 10 310 2.8E-4 T 28-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AM393_RS14020 167865f69d9a6db8e91fe6e9a68a8523 340 SUPERFAMILY SSF51735 139 304 9.2E-33 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS14020 167865f69d9a6db8e91fe6e9a68a8523 340 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 132 1.6E-32 T 28-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AM393_RS14020 167865f69d9a6db8e91fe6e9a68a8523 340 Gene3D G3DSA:3.90.180.10 1 147 3.8E-47 T 28-03-2018 AM393_RS14020 167865f69d9a6db8e91fe6e9a68a8523 340 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 61 75 - T 28-03-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 AM393_RS14020 167865f69d9a6db8e91fe6e9a68a8523 340 Gene3D G3DSA:3.40.50.720 148 329 1.4E-30 T 28-03-2018 AM393_RS10320 07717e87181d2d6fbce2e98525de4a5b 205 Gene3D G3DSA:3.20.20.70 1 205 1.2E-43 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM393_RS10320 07717e87181d2d6fbce2e98525de4a5b 205 SUPERFAMILY SSF51569 2 204 1.01E-57 T 28-03-2018 AM393_RS10320 07717e87181d2d6fbce2e98525de4a5b 205 Pfam PF01081 KDPG and KHG aldolase 6 182 3.1E-28 T 28-03-2018 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AM393_RS18255 7f83f4d653df5b72c3101d952fd68bec 189 ProDom PD103779 CRCA ANTIMICROBIAL RESISTANCE LIPOPROTEIN RCP A PEPTIDE ACYLATION LIPID EXPORTED 36 177 3.0E-72 T 28-03-2018 IPR009746 Antimicrobial peptide resistance/lipid A acylation PagP KEGG: 00565+2.3.1.25 AM393_RS18255 7f83f4d653df5b72c3101d952fd68bec 189 Hamap MF_00837 Lipid A palmitoyltransferase PagP [pagP]. 2 189 42.392 T 28-03-2018 IPR009746 Antimicrobial peptide resistance/lipid A acylation PagP KEGG: 00565+2.3.1.25 AM393_RS18255 7f83f4d653df5b72c3101d952fd68bec 189 Pfam PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP 40 186 1.2E-67 T 28-03-2018 IPR009746 Antimicrobial peptide resistance/lipid A acylation PagP KEGG: 00565+2.3.1.25 AM393_RS18255 7f83f4d653df5b72c3101d952fd68bec 189 SUPERFAMILY SSF56925 35 189 5.41E-80 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AM393_RS18255 7f83f4d653df5b72c3101d952fd68bec 189 Gene3D G3DSA:2.40.160.20 32 189 8.8E-67 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AM393_RS15630 8dff417ec0f31b56ff5a10fd070b9fb2 198 PIRSF PIRSF006102 1 198 7.7E-65 T 28-03-2018 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 AM393_RS15630 8dff417ec0f31b56ff5a10fd070b9fb2 198 Pfam PF02508 Rnf-Nqr subunit, membrane protein 4 196 8.6E-59 T 28-03-2018 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 AM393_RS15630 8dff417ec0f31b56ff5a10fd070b9fb2 198 TIGRFAM TIGR01940 nqrE: NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit 3 197 8.4E-105 T 28-03-2018 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 AM393_RS15630 8dff417ec0f31b56ff5a10fd070b9fb2 198 Hamap MF_00429 Na(+)-translocating NADH-quinone reductase subunit E [nqrE]. 1 198 29.685 T 28-03-2018 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 AM393_RS24235 c9c99ce7cdef799d7e6c1c296b31c57b 192 SUPERFAMILY SSF48498 75 163 1.58E-12 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AM393_RS24235 c9c99ce7cdef799d7e6c1c296b31c57b 192 SUPERFAMILY SSF46689 5 80 1.42E-16 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS24235 c9c99ce7cdef799d7e6c1c296b31c57b 192 Gene3D G3DSA:1.10.357.10 55 186 4.1E-21 T 28-03-2018 AM393_RS24235 c9c99ce7cdef799d7e6c1c296b31c57b 192 Gene3D G3DSA:1.10.10.60 2 54 1.4E-16 T 28-03-2018 AM393_RS24235 c9c99ce7cdef799d7e6c1c296b31c57b 192 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 29 52 8.3E-9 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM393_RS24235 c9c99ce7cdef799d7e6c1c296b31c57b 192 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 8 21 8.3E-9 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM393_RS24235 c9c99ce7cdef799d7e6c1c296b31c57b 192 Pfam PF00440 Bacterial regulatory proteins, tetR family 8 54 4.1E-13 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM393_RS09730 e83a2019ec7c25969e6e71fcc5ebd054 238 Gene3D G3DSA:3.30.230.70 1 238 6.0E-62 T 28-03-2018 IPR027408 PNPase/RNase PH domain Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AM393_RS09730 e83a2019ec7c25969e6e71fcc5ebd054 238 SUPERFAMILY SSF54211 1 181 3.24E-46 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM393_RS09730 e83a2019ec7c25969e6e71fcc5ebd054 238 Pfam PF03725 3' exoribonuclease family, domain 2 157 222 8.8E-13 T 28-03-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AM393_RS09730 e83a2019ec7c25969e6e71fcc5ebd054 238 Pfam PF01138 3' exoribonuclease family, domain 1 10 140 4.9E-24 T 28-03-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AM393_RS09730 e83a2019ec7c25969e6e71fcc5ebd054 238 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 2 236 2.8E-114 T 28-03-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 AM393_RS09730 e83a2019ec7c25969e6e71fcc5ebd054 238 SUPERFAMILY SSF55666 153 237 2.49E-26 T 28-03-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AM393_RS09730 e83a2019ec7c25969e6e71fcc5ebd054 238 Hamap MF_00564 Ribonuclease PH [rph]. 1 237 49.783 T 28-03-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 AM393_RS09730 e83a2019ec7c25969e6e71fcc5ebd054 238 ProSitePatterns PS01277 Ribonuclease PH signature. 116 128 - T 28-03-2018 IPR018336 Ribonuclease PH, conserved site AM393_RS10045 963f86cb10ddd4b7256b96c994a2066d 477 Pfam PF00367 phosphotransferase system, EIIB 11 43 1.6E-12 T 28-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AM393_RS10045 963f86cb10ddd4b7256b96c994a2066d 477 Pfam PF02378 Phosphotransferase system, EIIC 122 404 1.2E-33 T 28-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AM393_RS10045 963f86cb10ddd4b7256b96c994a2066d 477 SUPERFAMILY SSF55604 8 80 8.5E-19 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AM393_RS10045 963f86cb10ddd4b7256b96c994a2066d 477 Gene3D G3DSA:3.30.1360.60 6 83 3.9E-24 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AM393_RS10045 963f86cb10ddd4b7256b96c994a2066d 477 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 21 38 - T 28-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AM393_RS22680 c45deef0fa9faf113ddb382365b9b1a8 255 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 96 116 - T 28-03-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 AM393_RS22680 c45deef0fa9faf113ddb382365b9b1a8 255 SUPERFAMILY SSF52096 2 255 3.87E-83 T 28-03-2018 IPR029045 ClpP/crotonase-like domain AM393_RS22680 c45deef0fa9faf113ddb382365b9b1a8 255 Gene3D G3DSA:1.10.12.10 213 255 1.9E-20 T 28-03-2018 IPR014748 Crontonase, C-terminal AM393_RS22680 c45deef0fa9faf113ddb382365b9b1a8 255 Pfam PF00378 Enoyl-CoA hydratase/isomerase 10 254 6.1E-71 T 28-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 AM393_RS22680 c45deef0fa9faf113ddb382365b9b1a8 255 Gene3D G3DSA:3.90.226.10 3 212 5.2E-70 T 28-03-2018 AM393_RS25895 2f998184e2be05a500b04320c8930140 294 SUPERFAMILY SSF90123 9 281 1.44E-16 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AM393_RS25895 2f998184e2be05a500b04320c8930140 294 Pfam PF13748 ABC transporter transmembrane region 9 245 1.3E-89 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AM393_RS25895 2f998184e2be05a500b04320c8930140 294 Gene3D G3DSA:1.20.1560.10 6 185 1.4E-8 T 28-03-2018 AM393_RS25895 2f998184e2be05a500b04320c8930140 294 Gene3D G3DSA:1.20.1560.10 186 283 0.016 T 28-03-2018 AM393_RS19415 d4c4990599c9e48e22f118693c698292 400 Gene3D G3DSA:1.20.1250.20 206 398 1.2E-24 T 28-03-2018 AM393_RS19415 d4c4990599c9e48e22f118693c698292 400 Pfam PF07690 Major Facilitator Superfamily 223 387 5.8E-16 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS19415 d4c4990599c9e48e22f118693c698292 400 SUPERFAMILY SSF103473 12 391 5.23E-45 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS19415 d4c4990599c9e48e22f118693c698292 400 Gene3D G3DSA:1.20.1250.20 11 204 1.3E-13 T 28-03-2018 AM393_RS14170 498e73e98a51f251c32be2ab5741e6af 137 TIGRFAM TIGR00664 DNA_III_psi: DNA polymerase III, psi subunit 1 125 4.6E-50 T 28-03-2018 IPR018382 DNA polymerase III, psi subunit, subgroup GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM393_RS14170 498e73e98a51f251c32be2ab5741e6af 137 Pfam PF03603 DNA polymerase III psi subunit 3 126 4.5E-45 T 28-03-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM393_RS14170 498e73e98a51f251c32be2ab5741e6af 137 SUPERFAMILY SSF102220 27 136 1.57E-34 T 28-03-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM393_RS14170 498e73e98a51f251c32be2ab5741e6af 137 ProDom PD032475 DNA POLYMERASE PSI SUBUNIT III TRANSFERASE NUCLEOTIDYLTRANSFERASE III 3D-STRUCTURE DNA-DIRECTED 34 125 1.0E-30 T 28-03-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM393_RS14170 498e73e98a51f251c32be2ab5741e6af 137 Gene3D G3DSA:3.40.50.10220 35 129 1.9E-33 T 28-03-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM393_RS14170 498e73e98a51f251c32be2ab5741e6af 137 PIRSF PIRSF029225 2 131 4.6E-47 T 28-03-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM393_RS28025 0d117353cbe14cb7b7d8d5a827908768 84 ProDom PD028820 PLASMID TRBE CONJUGATIVE TRANSFER MEMBRANE TRANSMEMBRANE INNER 10 72 8.0E-7 T 28-03-2018 IPR020150 Type IV conjugative transfer system protein TrbE AM393_RS28025 0d117353cbe14cb7b7d8d5a827908768 84 Pfam PF11100 Conjugal transfer protein TrbE 10 71 1.5E-11 T 28-03-2018 IPR020150 Type IV conjugative transfer system protein TrbE AM393_RS12260 47f653a8f5c3daf8b857321749262397 548 TIGRFAM TIGR00831 a_cpa1: Na+/H+ antiporter 7 546 1.3E-238 T 28-03-2018 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria GO:0006812|GO:0015299|GO:0016021 AM393_RS12260 47f653a8f5c3daf8b857321749262397 548 Pfam PF00999 Sodium/hydrogen exchanger family 8 421 4.0E-75 T 28-03-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AM393_RS26135 80dd924bd0faab72265e4acf1b50f12a 331 SUPERFAMILY SSF161098 127 307 4.32E-26 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS26135 80dd924bd0faab72265e4acf1b50f12a 331 Gene3D G3DSA:1.10.3720.10 23 327 2.6E-23 T 28-03-2018 AM393_RS26135 80dd924bd0faab72265e4acf1b50f12a 331 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 152 312 5.5E-14 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS14045 b9e967c3b3348a80521ea6838fb52761 259 Pfam PF03609 PTS system sorbose-specific iic component 1 233 4.6E-71 T 28-03-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 AM393_RS01325 b1fffa7715e2e0cf627e4a2e297b6c62 912 Gene3D G3DSA:3.40.50.300 227 833 5.6E-16 T 28-03-2018 AM393_RS01325 b1fffa7715e2e0cf627e4a2e297b6c62 912 SUPERFAMILY SSF52540 477 834 3.97E-29 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS01325 b1fffa7715e2e0cf627e4a2e297b6c62 912 Pfam PF05101 Type IV secretory pathway, VirB3-like protein 3 79 2.5E-13 T 28-03-2018 IPR007792 Type IV secretion system, VirB3 / TrbD / AvhB AM393_RS01325 b1fffa7715e2e0cf627e4a2e297b6c62 912 Pfam PF03135 CagE, TrbE, VirB family, component of type IV transporter system 269 470 9.6E-43 T 28-03-2018 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain GO:0005524 AM393_RS02205 8257ac57e5314a5580e9af70550a158e 489 PIRSF PIRSF006060 1 486 7.6E-77 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AM393_RS02205 8257ac57e5314a5580e9af70550a158e 489 Pfam PF00324 Amino acid permease 21 475 9.3E-146 T 28-03-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 AM393_RS02205 8257ac57e5314a5580e9af70550a158e 489 ProSitePatterns PS00218 Amino acid permeases signature. 46 77 - T 28-03-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 AM393_RS14935 11ebc544d7e6c1d1d76c3cf445fbbf40 297 SUPERFAMILY SSF54675 13 130 2.59E-32 T 28-03-2018 AM393_RS14935 11ebc544d7e6c1d1d76c3cf445fbbf40 297 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 43 129 7.1E-24 T 28-03-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 AM393_RS14935 11ebc544d7e6c1d1d76c3cf445fbbf40 297 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 131 295 1.5E-59 T 28-03-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 AM393_RS14935 11ebc544d7e6c1d1d76c3cf445fbbf40 297 Gene3D G3DSA:3.90.1170.20 11 156 8.8E-43 T 28-03-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 AM393_RS14935 11ebc544d7e6c1d1d76c3cf445fbbf40 297 SUPERFAMILY SSF51690 131 296 9.03E-60 T 28-03-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 AM393_RS14935 11ebc544d7e6c1d1d76c3cf445fbbf40 297 PIRSF PIRSF006250 17 297 1.1E-106 T 28-03-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 AM393_RS14935 11ebc544d7e6c1d1d76c3cf445fbbf40 297 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 27 296 1.0E-98 T 28-03-2018 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 AM393_RS14935 11ebc544d7e6c1d1d76c3cf445fbbf40 297 Gene3D G3DSA:3.20.20.70 157 286 5.3E-40 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM393_RS05105 ad9c147e256fbf0f1effd9f6c24e3a9a 143 TIGRFAM TIGR03391 FeS_syn_CsdE: cysteine desulfurase, sulfur acceptor subunit CsdE 4 140 5.5E-66 T 28-03-2018 IPR017763 Cysteine desulfurase, sulphur acceptor subunit CsdE AM393_RS05105 ad9c147e256fbf0f1effd9f6c24e3a9a 143 Gene3D G3DSA:3.90.1010.10 1 143 5.6E-42 T 28-03-2018 AM393_RS05105 ad9c147e256fbf0f1effd9f6c24e3a9a 143 SUPERFAMILY SSF82649 3 141 2.04E-41 T 28-03-2018 AM393_RS05105 ad9c147e256fbf0f1effd9f6c24e3a9a 143 Pfam PF02657 Fe-S metabolism associated domain 20 135 5.0E-37 T 28-03-2018 IPR003808 Fe-S metabolism associated domain, SufE-like AM393_RS05700 c387d5a7fe169024acc87b3eb92fb21d 176 Pfam PF00419 Fimbrial protein 28 176 2.4E-20 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM393_RS05700 c387d5a7fe169024acc87b3eb92fb21d 176 SUPERFAMILY SSF49401 33 176 1.14E-35 T 28-03-2018 IPR008966 Adhesion domain AM393_RS05700 c387d5a7fe169024acc87b3eb92fb21d 176 Gene3D G3DSA:2.60.40.1090 25 176 3.5E-35 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM393_RS04170 d5297ca63008d76bbd380b392aba0f72 364 Gene3D G3DSA:2.60.40.1090 210 364 1.6E-23 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM393_RS04170 d5297ca63008d76bbd380b392aba0f72 364 SUPERFAMILY SSF49401 218 364 2.09E-18 T 28-03-2018 IPR008966 Adhesion domain AM393_RS18820 1670a22f2eb9600bd49acaec5e97d6a2 250 Gene3D G3DSA:3.40.50.1240 2 250 2.4E-67 T 28-03-2018 IPR029033 Histidine phosphatase superfamily AM393_RS18820 1670a22f2eb9600bd49acaec5e97d6a2 250 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 131 221 1.1E-4 T 28-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AM393_RS18820 1670a22f2eb9600bd49acaec5e97d6a2 250 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 6 125 3.3E-30 T 28-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AM393_RS18820 1670a22f2eb9600bd49acaec5e97d6a2 250 Hamap MF_01039 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 3 230 46.623 T 28-03-2018 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 AM393_RS18820 1670a22f2eb9600bd49acaec5e97d6a2 250 SMART SM00855 5 191 2.7E-27 T 28-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AM393_RS18820 1670a22f2eb9600bd49acaec5e97d6a2 250 SUPERFAMILY SSF53254 4 247 1.09E-77 T 28-03-2018 IPR029033 Histidine phosphatase superfamily AM393_RS18820 1670a22f2eb9600bd49acaec5e97d6a2 250 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 8 17 - T 28-03-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 AM393_RS18820 1670a22f2eb9600bd49acaec5e97d6a2 250 PIRSF PIRSF000709 167 239 0.021 T 28-03-2018 AM393_RS18820 1670a22f2eb9600bd49acaec5e97d6a2 250 PIRSF PIRSF000709 3 116 3.1E-9 T 28-03-2018 AM393_RS18820 1670a22f2eb9600bd49acaec5e97d6a2 250 TIGRFAM TIGR01258 pgm_1: phosphoglycerate mutase 1 family 5 248 3.9E-128 T 28-03-2018 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 AM393_RS24535 8f065a7869bc6871de6ce009fe288a9e 308 Pfam PF12706 Beta-lactamase superfamily domain 51 270 3.6E-45 T 28-03-2018 IPR001279 Metallo-beta-lactamase AM393_RS24535 8f065a7869bc6871de6ce009fe288a9e 308 Gene3D G3DSA:3.60.15.10 1 307 1.1E-43 T 28-03-2018 IPR001279 Metallo-beta-lactamase AM393_RS24535 8f065a7869bc6871de6ce009fe288a9e 308 Hamap MF_00653 Coenzyme PQQ synthesis protein B [pqqB]. 1 308 166.462 T 28-03-2018 IPR011842 Coenzyme PQQ biosynthesis protein B GO:0006810|GO:0018189 AM393_RS24535 8f065a7869bc6871de6ce009fe288a9e 308 SUPERFAMILY SSF56281 1 303 9.06E-64 T 28-03-2018 IPR001279 Metallo-beta-lactamase AM393_RS24535 8f065a7869bc6871de6ce009fe288a9e 308 TIGRFAM TIGR02108 PQQ_syn_pqqB: coenzyme PQQ biosynthesis protein B 3 303 1.4E-124 T 28-03-2018 IPR011842 Coenzyme PQQ biosynthesis protein B GO:0006810|GO:0018189 AM393_RS21620 a1464f6a9193e5e8a999ca1daf3a117a 269 SUPERFAMILY SSF51366 1 266 5.37E-92 T 28-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AM393_RS21620 a1464f6a9193e5e8a999ca1daf3a117a 269 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 263 3.1E-108 T 28-03-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AM393_RS21620 a1464f6a9193e5e8a999ca1daf3a117a 269 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 28-03-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AM393_RS21620 a1464f6a9193e5e8a999ca1daf3a117a 269 Gene3D G3DSA:3.20.20.70 2 269 1.2E-72 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM393_RS21620 a1464f6a9193e5e8a999ca1daf3a117a 269 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 12 265 38.511 T 28-03-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AM393_RS21620 a1464f6a9193e5e8a999ca1daf3a117a 269 Pfam PF00290 Tryptophan synthase alpha chain 8 266 5.2E-99 T 28-03-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AM393_RS12375 0b524b3d5248409da33a0b93c9575a73 506 SUPERFAMILY SSF52540 5 223 4.9E-60 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS12375 0b524b3d5248409da33a0b93c9575a73 506 SMART SM00382 280 474 7.6E-7 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS12375 0b524b3d5248409da33a0b93c9575a73 506 SMART SM00382 31 218 3.4E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS12375 0b524b3d5248409da33a0b93c9575a73 506 ProSitePatterns PS00211 ABC transporters family signature. 398 412 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS12375 0b524b3d5248409da33a0b93c9575a73 506 Pfam PF00005 ABC transporter 22 171 4.3E-31 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS12375 0b524b3d5248409da33a0b93c9575a73 506 Pfam PF00005 ABC transporter 272 425 6.2E-19 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS12375 0b524b3d5248409da33a0b93c9575a73 506 Gene3D G3DSA:3.40.50.300 270 491 5.3E-34 T 28-03-2018 AM393_RS12375 0b524b3d5248409da33a0b93c9575a73 506 Gene3D G3DSA:3.40.50.300 3 229 3.1E-56 T 28-03-2018 AM393_RS12375 0b524b3d5248409da33a0b93c9575a73 506 SUPERFAMILY SSF52540 271 484 1.3E-44 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS11890 8f323537c010e8db7821d5c27ec1481e 276 Pfam PF09339 IclR helix-turn-helix domain 28 78 4.0E-18 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AM393_RS11890 8f323537c010e8db7821d5c27ec1481e 276 SUPERFAMILY SSF46785 26 99 5.04E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS11890 8f323537c010e8db7821d5c27ec1481e 276 Gene3D G3DSA:1.10.10.10 8 87 2.9E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS11890 8f323537c010e8db7821d5c27ec1481e 276 Gene3D G3DSA:3.30.450.40 95 276 5.2E-51 T 28-03-2018 IPR029016 GAF domain-like AM393_RS11890 8f323537c010e8db7821d5c27ec1481e 276 SUPERFAMILY SSF55781 97 273 6.41E-50 T 28-03-2018 IPR029016 GAF domain-like AM393_RS11890 8f323537c010e8db7821d5c27ec1481e 276 Pfam PF01614 Bacterial transcriptional regulator 146 269 2.0E-41 T 28-03-2018 IPR014757 Transcription regulator IclR, C-terminal AM393_RS11890 8f323537c010e8db7821d5c27ec1481e 276 SMART SM00346 26 116 3.9E-37 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AM393_RS16775 ef2ba2d9a47d7de315e046a17c6e5970 434 SUPERFAMILY SSF53613 36 305 1.01E-44 T 28-03-2018 IPR029056 Ribokinase-like AM393_RS16775 ef2ba2d9a47d7de315e046a17c6e5970 434 SUPERFAMILY SSF53613 338 416 1.01E-44 T 28-03-2018 IPR029056 Ribokinase-like AM393_RS16775 ef2ba2d9a47d7de315e046a17c6e5970 434 Pfam PF00294 pfkB family carbohydrate kinase 140 296 6.2E-8 T 28-03-2018 IPR011611 Carbohydrate kinase PfkB AM393_RS16775 ef2ba2d9a47d7de315e046a17c6e5970 434 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 352 365 - T 28-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AM393_RS16775 ef2ba2d9a47d7de315e046a17c6e5970 434 Gene3D G3DSA:3.40.1190.20 32 431 8.4E-42 T 28-03-2018 IPR029056 Ribokinase-like AM393_RS27885 79d9f183504e27ac80063b455b4aae8b 483 Pfam PF03235 Protein of unknown function DUF262 20 207 7.9E-28 T 28-03-2018 IPR004919 Domain of unknown function DUF262 AM393_RS02630 195b1c8a7d48fa81e44e18f9e472a09a 153 Gene3D G3DSA:3.40.630.30 1 152 7.7E-34 T 28-03-2018 AM393_RS02630 195b1c8a7d48fa81e44e18f9e472a09a 153 Pfam PF13673 Acetyltransferase (GNAT) domain 45 149 4.0E-18 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AM393_RS02630 195b1c8a7d48fa81e44e18f9e472a09a 153 SUPERFAMILY SSF55729 1 149 1.25E-35 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM393_RS10900 220e868fbf1d2408e664b8b77928d749 419 Pfam PF06134 L-rhamnose isomerase (RhaA) 3 418 9.9E-235 T 28-03-2018 IPR009308 Rhamnose isomerase GO:0008740|GO:0019299|GO:0030145 KEGG: 00051+5.3.1.14 AM393_RS10900 220e868fbf1d2408e664b8b77928d749 419 Gene3D G3DSA:3.20.20.150 1 419 1.8E-111 T 28-03-2018 AM393_RS10900 220e868fbf1d2408e664b8b77928d749 419 SUPERFAMILY SSF51658 4 418 1.14E-82 T 28-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AM393_RS10900 220e868fbf1d2408e664b8b77928d749 419 TIGRFAM TIGR01748 rhaA: L-rhamnose isomerase 5 418 2.9E-244 T 28-03-2018 IPR009308 Rhamnose isomerase GO:0008740|GO:0019299|GO:0030145 KEGG: 00051+5.3.1.14 AM393_RS10900 220e868fbf1d2408e664b8b77928d749 419 Hamap MF_00541 L-rhamnose isomerase [rhaA]. 1 419 280.208 T 28-03-2018 IPR009308 Rhamnose isomerase GO:0008740|GO:0019299|GO:0030145 KEGG: 00051+5.3.1.14 AM393_RS10900 220e868fbf1d2408e664b8b77928d749 419 ProDom PD042532 ISOMERASE L-RHAMNOSE METAL-BINDING METABOLISM RHAMNOSE MANGANESE ENZYME KINASE 3D-STRUCTURE RHAA/RHAB 9 418 0.0 T 28-03-2018 AM393_RS10050 e16cfc62c312fcf57dfa520041cc302c 293 Pfam PF00892 EamA-like transporter family 2 138 3.3E-18 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM393_RS10050 e16cfc62c312fcf57dfa520041cc302c 293 Pfam PF00892 EamA-like transporter family 151 283 1.2E-20 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM393_RS10050 e16cfc62c312fcf57dfa520041cc302c 293 SUPERFAMILY SSF103481 184 289 2.88E-12 T 28-03-2018 AM393_RS10050 e16cfc62c312fcf57dfa520041cc302c 293 SUPERFAMILY SSF103481 36 141 2.35E-7 T 28-03-2018 AM393_RS08145 2b629ffe78f08597bce23e82a8dce771 157 Hamap MF_00598 Protein Smg [smg]. 1 157 33.469 T 28-03-2018 IPR007456 Smg AM393_RS08145 2b629ffe78f08597bce23e82a8dce771 157 Pfam PF04361 Protein of unknown function (DUF494) 1 157 3.0E-59 T 28-03-2018 IPR007456 Smg AM393_RS14050 20dbcd4e397e210b72ff2a3b31ba3693 279 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 17 279 3.6E-102 T 28-03-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 AM393_RS24605 3929e0ae0f84ddaeb6597a4c59479857 468 ProSitePatterns PS00217 Sugar transport proteins signature 2. 142 167 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM393_RS24605 3929e0ae0f84ddaeb6597a4c59479857 468 Gene3D G3DSA:1.20.1250.20 31 241 1.6E-25 T 28-03-2018 AM393_RS24605 3929e0ae0f84ddaeb6597a4c59479857 468 SUPERFAMILY SSF103473 25 467 8.24E-63 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS24605 3929e0ae0f84ddaeb6597a4c59479857 468 ProSitePatterns PS00216 Sugar transport proteins signature 1. 100 116 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM393_RS24605 3929e0ae0f84ddaeb6597a4c59479857 468 Gene3D G3DSA:1.20.1250.20 260 468 1.6E-24 T 28-03-2018 AM393_RS24605 3929e0ae0f84ddaeb6597a4c59479857 468 Pfam PF00083 Sugar (and other) transporter 41 468 1.0E-32 T 28-03-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 AM393_RS01030 f8ced740adb593fbad070aee0cf7139f 418 SUPERFAMILY SSF56349 98 392 2.35E-56 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AM393_RS01030 f8ced740adb593fbad070aee0cf7139f 418 Gene3D G3DSA:1.10.150.130 83 200 1.1E-20 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal AM393_RS01030 f8ced740adb593fbad070aee0cf7139f 418 Pfam PF13356 Arm DNA-binding domain 3 87 8.7E-18 T 28-03-2018 IPR025166 Integrase, DNA-binding domain AM393_RS01030 f8ced740adb593fbad070aee0cf7139f 418 Pfam PF00589 Phage integrase family 212 383 7.2E-19 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM393_RS01030 f8ced740adb593fbad070aee0cf7139f 418 Gene3D G3DSA:1.10.443.10 201 398 5.1E-23 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM393_RS09500 b73abbf79d61f066cbceac8e439660c0 462 Gene3D G3DSA:3.40.640.10 102 347 6.8E-33 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM393_RS09500 b73abbf79d61f066cbceac8e439660c0 462 Hamap MF_00423 L-seryl-tRNA(Sec) selenium transferase [selA]. 1 462 255.348 T 28-03-2018 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 AM393_RS09500 b73abbf79d61f066cbceac8e439660c0 462 TIGRFAM TIGR00474 selA: L-seryl-tRNA(Sec) selenium transferase 10 459 3.8E-188 T 28-03-2018 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 AM393_RS09500 b73abbf79d61f066cbceac8e439660c0 462 Pfam PF03841 L-seryl-tRNA selenium transferase 83 450 5.9E-177 T 28-03-2018 IPR018319 L-seryl-tRNA selenium transferase-like KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 AM393_RS09500 b73abbf79d61f066cbceac8e439660c0 462 SUPERFAMILY SSF53383 78 380 9.56E-44 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM393_RS09500 b73abbf79d61f066cbceac8e439660c0 462 Pfam PF12390 Selenocysteine synthase N terminal 11 48 1.3E-9 T 28-03-2018 IPR025862 L-seryl-tRNA selenium transferase N-terminal domain KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 AM393_RS16055 854f37ae8e1c92e5f0748e47d1f90595 386 Pfam PF00144 Beta-lactamase 46 357 7.0E-61 T 28-03-2018 IPR001466 Beta-lactamase-related AM393_RS16055 854f37ae8e1c92e5f0748e47d1f90595 386 SUPERFAMILY SSF56601 33 367 1.31E-68 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AM393_RS16055 854f37ae8e1c92e5f0748e47d1f90595 386 Gene3D G3DSA:3.40.710.10 28 375 8.5E-71 T 28-03-2018 AM393_RS18605 37b48f17d88b7dd7c15d9fd066217758 247 SUPERFAMILY SSF102705 1 246 1.57E-84 T 28-03-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 AM393_RS18605 37b48f17d88b7dd7c15d9fd066217758 247 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 6 234 2.6E-57 T 28-03-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 AM393_RS18605 37b48f17d88b7dd7c15d9fd066217758 247 Gene3D G3DSA:3.40.1390.30 110 218 2.6E-31 T 28-03-2018 AM393_RS18605 37b48f17d88b7dd7c15d9fd066217758 247 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 1 246 1.7E-79 T 28-03-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 AM393_RS18605 37b48f17d88b7dd7c15d9fd066217758 247 Gene3D G3DSA:3.40.1390.30 1 109 1.4E-27 T 28-03-2018 AM393_RS16075 139eec46ae87bd1a036d161752db922b 100 Pfam PF10954 Protein of unknown function (DUF2755) 1 100 1.9E-52 T 28-03-2018 IPR020513 Uncharacterised protein family, inner membrane YaiY GO:0016021 AM393_RS16075 139eec46ae87bd1a036d161752db922b 100 ProDom PD068630 MEMBRANE INNER YAIY TRANSMEMBRANE 1 100 7.0E-30 T 28-03-2018 IPR020513 Uncharacterised protein family, inner membrane YaiY GO:0016021 AM393_RS25470 d9cb73984cb2be18e36a103aeea35c49 453 SUPERFAMILY SSF55073 296 449 7.85E-45 T 28-03-2018 IPR029787 Nucleotide cyclase AM393_RS25470 d9cb73984cb2be18e36a103aeea35c49 453 Gene3D G3DSA:3.30.70.270 285 452 9.2E-51 T 28-03-2018 AM393_RS25470 d9cb73984cb2be18e36a103aeea35c49 453 SMART SM00267 278 448 2.9E-55 T 28-03-2018 IPR000160 GGDEF domain AM393_RS25470 d9cb73984cb2be18e36a103aeea35c49 453 Pfam PF17158 Membrane-associated sensor, integral membrane domain 40 277 1.6E-72 T 28-03-2018 IPR033424 Membrane-associated sensor domain AM393_RS25470 d9cb73984cb2be18e36a103aeea35c49 453 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 290 447 4.8E-46 T 28-03-2018 IPR000160 GGDEF domain AM393_RS25470 d9cb73984cb2be18e36a103aeea35c49 453 Pfam PF00990 Diguanylate cyclase, GGDEF domain 292 444 5.8E-45 T 28-03-2018 IPR000160 GGDEF domain AM393_RS02350 1a296bb8dbb21e9b4128e215c0301539 198 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 12 189 9.3E-45 T 28-03-2018 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 Reactome: R-HSA-480985 AM393_RS02350 1a296bb8dbb21e9b4128e215c0301539 198 SUPERFAMILY SSF55811 11 191 1.96E-43 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 AM393_RS02350 1a296bb8dbb21e9b4128e215c0301539 198 Gene3D G3DSA:3.90.79.10 5 195 1.2E-32 T 28-03-2018 AM393_RS21840 3e2df837b30e111eb2390ee65d4be943 463 Gene3D G3DSA:1.20.1250.20 13 205 4.8E-29 T 28-03-2018 AM393_RS21840 3e2df837b30e111eb2390ee65d4be943 463 Pfam PF07690 Major Facilitator Superfamily 23 242 3.6E-26 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS21840 3e2df837b30e111eb2390ee65d4be943 463 Pfam PF07690 Major Facilitator Superfamily 281 460 1.1E-13 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS21840 3e2df837b30e111eb2390ee65d4be943 463 SUPERFAMILY SSF103473 254 460 5.41E-50 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS21840 3e2df837b30e111eb2390ee65d4be943 463 SUPERFAMILY SSF103473 15 205 5.41E-50 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS21840 3e2df837b30e111eb2390ee65d4be943 463 Gene3D G3DSA:1.20.1250.20 263 462 8.8E-23 T 28-03-2018 AM393_RS21815 5966f7bb87054f0f46242d572a24a0aa 547 Gene3D G3DSA:3.10.105.10 305 510 5.2E-52 T 28-03-2018 AM393_RS21815 5966f7bb87054f0f46242d572a24a0aa 547 PIRSF PIRSF002741 1 542 3.6E-92 T 28-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AM393_RS21815 5966f7bb87054f0f46242d572a24a0aa 547 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 79 457 9.0E-83 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain AM393_RS21815 5966f7bb87054f0f46242d572a24a0aa 547 Gene3D G3DSA:3.90.76.10 45 208 1.4E-32 T 28-03-2018 AM393_RS21815 5966f7bb87054f0f46242d572a24a0aa 547 SUPERFAMILY SSF53850 36 537 4.52E-131 T 28-03-2018 AM393_RS21815 5966f7bb87054f0f46242d572a24a0aa 547 Gene3D G3DSA:3.40.190.10 209 304 5.8E-23 T 28-03-2018 AM393_RS18160 ec083d592049b6ca152f5f2068f73202 313 SUPERFAMILY SSF53613 2 308 8.57E-62 T 28-03-2018 IPR029056 Ribokinase-like AM393_RS18160 ec083d592049b6ca152f5f2068f73202 313 Pfam PF00294 pfkB family carbohydrate kinase 7 295 2.8E-44 T 28-03-2018 IPR011611 Carbohydrate kinase PfkB AM393_RS18160 ec083d592049b6ca152f5f2068f73202 313 Gene3D G3DSA:3.40.1190.20 1 313 1.1E-57 T 28-03-2018 IPR029056 Ribokinase-like AM393_RS17320 37e66264f0b6228c4f5b42acf2bd4963 186 SUPERFAMILY SSF49401 28 185 2.83E-26 T 28-03-2018 IPR008966 Adhesion domain AM393_RS17320 37e66264f0b6228c4f5b42acf2bd4963 186 Pfam PF16970 Type-1 fimbrial protein, A 51 186 1.0E-17 T 28-03-2018 AM393_RS17320 37e66264f0b6228c4f5b42acf2bd4963 186 Gene3D G3DSA:2.60.40.1090 27 186 1.9E-31 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM393_RS10655 600582481b66029b8e2a9f09a843dc87 89 Pfam PF06288 Protein of unknown function (DUF1040) 1 86 1.4E-46 T 28-03-2018 IPR009383 Protein of unknown function DUF1040 AM393_RS10655 600582481b66029b8e2a9f09a843dc87 89 ProDom PD029038 YIHD CYTOPLASMIC ENZYME Y3814 GLYCOGEN YPO0013A HI0845 DIRECT ORF1 UNCHARACTERIZED 1 87 3.0E-42 T 28-03-2018 IPR009383 Protein of unknown function DUF1040 AM393_RS24195 7fe8857ada5d69894f56baa45922f3c5 416 Pfam PF03611 PTS system sugar-specific permease component 9 404 1.8E-144 T 28-03-2018 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 AM393_RS16355 bcfc7f538e5f373fb0bd03590cd08cf1 197 SUPERFAMILY SSF52317 5 188 1.8E-47 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AM393_RS16355 bcfc7f538e5f373fb0bd03590cd08cf1 197 TIGRFAM TIGR01383 not_thiJ: DJ-1 family protein 5 183 1.2E-63 T 28-03-2018 IPR006287 Protein DJ-1 AM393_RS16355 bcfc7f538e5f373fb0bd03590cd08cf1 197 Pfam PF01965 DJ-1/PfpI family 4 170 2.5E-45 T 28-03-2018 IPR002818 DJ-1/PfpI AM393_RS16355 bcfc7f538e5f373fb0bd03590cd08cf1 197 Gene3D G3DSA:3.40.50.880 1 191 2.8E-39 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like AM393_RS04760 99789c9c5b5da3a13b8f6b29ac2c8f06 78 Gene3D G3DSA:2.20.25.10 2 41 3.5E-4 T 28-03-2018 AM393_RS08485 f677e1c187bd8399891c752bf840d1eb 55 ProDom PD026929 YHFG 1 35 2.0E-9 T 28-03-2018 IPR022541 Protein of unknown function DUF2559 AM393_RS08485 f677e1c187bd8399891c752bf840d1eb 55 Pfam PF10832 Protein of unknown function (DUF2559) 2 55 3.5E-31 T 28-03-2018 IPR022541 Protein of unknown function DUF2559 AM393_RS04285 d2a5970af69ef3284caa1769d578fc83 320 Pfam PF00268 Ribonucleotide reductase, small chain 10 281 2.4E-82 T 28-03-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM393_RS04285 d2a5970af69ef3284caa1769d578fc83 320 TIGRFAM TIGR04171 RNR_1b_NrdF: ribonucleoside-diphosphate reductase, class 1b, beta subunit 8 320 5.3E-141 T 28-03-2018 IPR026494 Ribonucleoside reductase subunit beta, NrdF GO:0005971|GO:0009263 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AM393_RS04285 d2a5970af69ef3284caa1769d578fc83 320 PIRSF PIRSF000355 1 317 5.1E-76 T 28-03-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM393_RS04285 d2a5970af69ef3284caa1769d578fc83 320 SUPERFAMILY SSF47240 7 320 3.98E-101 T 28-03-2018 IPR009078 Ferritin-like superfamily AM393_RS04285 d2a5970af69ef3284caa1769d578fc83 320 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 98 114 - T 28-03-2018 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM393_RS04285 d2a5970af69ef3284caa1769d578fc83 320 Gene3D G3DSA:1.10.620.20 1 288 3.9E-73 T 28-03-2018 AM393_RS07100 111d09f3706d11fa8df2c7f93cf6f205 459 Hamap MF_01276 Putrescine aminotransferase [patA]. 1 459 87.386 T 28-03-2018 IPR017747 Putrescine aminotransferase GO:0009447|GO:0030170|GO:0033094 KEGG: 00330+2.6.1.82|MetaCyc: PWY-2|MetaCyc: PWY-6440 AM393_RS07100 111d09f3706d11fa8df2c7f93cf6f205 459 Gene3D G3DSA:3.90.1150.10 340 459 1.3E-26 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM393_RS07100 111d09f3706d11fa8df2c7f93cf6f205 459 SUPERFAMILY SSF53383 74 450 1.53E-119 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM393_RS07100 111d09f3706d11fa8df2c7f93cf6f205 459 Pfam PF00202 Aminotransferase class-III 74 449 5.3E-104 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM393_RS07100 111d09f3706d11fa8df2c7f93cf6f205 459 Gene3D G3DSA:3.40.640.10 91 339 6.7E-85 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM393_RS07100 111d09f3706d11fa8df2c7f93cf6f205 459 PIRSF PIRSF000521 54 176 0.0013 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM393_RS07100 111d09f3706d11fa8df2c7f93cf6f205 459 PIRSF PIRSF000521 165 452 7.3E-41 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM393_RS07100 111d09f3706d11fa8df2c7f93cf6f205 459 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 268 305 - T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM393_RS07100 111d09f3706d11fa8df2c7f93cf6f205 459 TIGRFAM TIGR03372 putres_am_tran: putrescine aminotransferase 8 449 4.0E-289 T 28-03-2018 IPR017747 Putrescine aminotransferase GO:0009447|GO:0030170|GO:0033094 KEGG: 00330+2.6.1.82|MetaCyc: PWY-2|MetaCyc: PWY-6440 AM393_RS18350 be29714df2dfa2b7c64b2263747fa455 196 Pfam PF04390 Lipopolysaccharide-assembly 36 159 8.9E-15 T 28-03-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 AM393_RS18350 be29714df2dfa2b7c64b2263747fa455 196 Gene3D G3DSA:3.30.160.150 19 173 7.1E-48 T 28-03-2018 AM393_RS18350 be29714df2dfa2b7c64b2263747fa455 196 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 4 164 25.856 T 28-03-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 AM393_RS06265 6f86687831a1f30ccc47dead5a980dbe 237 Pfam PF04474 Protein of unknown function (DUF554) 3 229 5.7E-66 T 28-03-2018 IPR007563 Protein of unknown function DUF554 AM393_RS23985 a48f0e179acf5238991df6fa945d2364 123 Pfam PF10012 Uncharacterized protein conserved in bacteria (DUF2255) 8 120 5.8E-40 T 28-03-2018 IPR016888 Uncharacterised conserved protein UCP028498 AM393_RS06695 aa252ee9407def636b4f2dab4625e7e4 395 TIGRFAM TIGR01324 cysta_beta_ly_B: cystathionine beta-lyase 8 394 1.1E-169 T 28-03-2018 IPR006233 Cystathionine beta-lyase, bacterial GO:0004121|GO:0005737|GO:0006520 KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8|MetaCyc: PWY-6936 AM393_RS06695 aa252ee9407def636b4f2dab4625e7e4 395 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 202 216 - T 28-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AM393_RS06695 aa252ee9407def636b4f2dab4625e7e4 395 PIRSF PIRSF001434 1 395 2.1E-117 T 28-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AM393_RS06695 aa252ee9407def636b4f2dab4625e7e4 395 Gene3D G3DSA:3.40.640.10 1 258 2.0E-38 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM393_RS06695 aa252ee9407def636b4f2dab4625e7e4 395 Gene3D G3DSA:3.90.1150.10 259 395 5.2E-36 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM393_RS06695 aa252ee9407def636b4f2dab4625e7e4 395 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 7 391 4.6E-118 T 28-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AM393_RS06695 aa252ee9407def636b4f2dab4625e7e4 395 SUPERFAMILY SSF53383 24 393 3.17E-88 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM393_RS16360 7c10507021e54fb259ba6787f91aface 303 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 143 3.1E-22 T 28-03-2018 IPR013332 Ketopantoate reductase, N-terminal domain GO:0008677|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|MetaCyc: PWY-7862 AM393_RS16360 7c10507021e54fb259ba6787f91aface 303 SUPERFAMILY SSF51735 1 167 4.05E-57 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS16360 7c10507021e54fb259ba6787f91aface 303 SUPERFAMILY SSF48179 168 289 1.63E-37 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AM393_RS16360 7c10507021e54fb259ba6787f91aface 303 Gene3D G3DSA:3.40.50.720 1 167 7.6E-23 T 28-03-2018 AM393_RS16360 7c10507021e54fb259ba6787f91aface 303 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 168 289 3.5E-36 T 28-03-2018 IPR013752 Ketopantoate reductase, C-terminal domain GO:0016491|GO:0050661|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|MetaCyc: PWY-7862 AM393_RS16360 7c10507021e54fb259ba6787f91aface 303 Gene3D G3DSA:1.10.1040.10 168 295 1.3E-38 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AM393_RS16360 7c10507021e54fb259ba6787f91aface 303 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 2 291 2.0E-72 T 28-03-2018 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0015940|GO:0016491|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|MetaCyc: PWY-7862 AM393_RS11030 4bb67131f65279f0518b5b41bfe2734f 123 SUPERFAMILY SSF69118 4 120 2.34E-34 T 28-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AM393_RS11030 4bb67131f65279f0518b5b41bfe2734f 123 Gene3D G3DSA:1.20.1290.10 8 123 1.9E-36 T 28-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AM393_RS11030 4bb67131f65279f0518b5b41bfe2734f 123 Pfam PF02627 Carboxymuconolactone decarboxylase family 33 117 9.5E-23 T 28-03-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AM393_RS09515 eadf1480b75296b5baa2caf948cb9575 122 PIRSF PIRSF028770 1 122 4.6E-62 T 28-03-2018 IPR011223 Uncharacterised conserved protein UCP028770 AM393_RS09515 eadf1480b75296b5baa2caf948cb9575 122 Pfam PF11742 Protein of unknown function (DUF3302) 3 79 6.6E-41 T 28-03-2018 IPR011223 Uncharacterised conserved protein UCP028770 AM393_RS13520 8c954785e6f011315fd5b346a3f7d905 159 Pfam PF05638 Type VI secretion system effector, Hcp 6 142 1.2E-31 T 28-03-2018 IPR008514 Type VI secretion system effector, Hcp AM393_RS13520 8c954785e6f011315fd5b346a3f7d905 159 Gene3D G3DSA:2.30.110.20 1 159 3.6E-46 T 28-03-2018 IPR008514 Type VI secretion system effector, Hcp AM393_RS13520 8c954785e6f011315fd5b346a3f7d905 159 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 155 1.7E-38 T 28-03-2018 IPR008514 Type VI secretion system effector, Hcp AM393_RS13520 8c954785e6f011315fd5b346a3f7d905 159 SUPERFAMILY SSF141452 3 156 1.02E-38 T 28-03-2018 IPR008514 Type VI secretion system effector, Hcp AM393_RS05230 6ada905ef0a70f7d9f8c7851358dc479 303 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 260 275 3.3E-6 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM393_RS05230 6ada905ef0a70f7d9f8c7851358dc479 303 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 275 291 3.3E-6 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM393_RS05230 6ada905ef0a70f7d9f8c7851358dc479 303 Pfam PF10114 Sensory domain found in PocR 7 164 3.2E-43 T 28-03-2018 IPR018771 PocR domain AM393_RS05230 6ada905ef0a70f7d9f8c7851358dc479 303 Gene3D G3DSA:1.10.10.60 245 300 1.7E-14 T 28-03-2018 AM393_RS05230 6ada905ef0a70f7d9f8c7851358dc479 303 Gene3D G3DSA:2.60.120.10 39 244 6.4E-16 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AM393_RS05230 6ada905ef0a70f7d9f8c7851358dc479 303 SUPERFAMILY SSF46689 191 242 7.17E-10 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS05230 6ada905ef0a70f7d9f8c7851358dc479 303 Pfam PF12833 Helix-turn-helix domain 214 293 1.1E-20 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM393_RS05230 6ada905ef0a70f7d9f8c7851358dc479 303 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 245 287 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM393_RS05230 6ada905ef0a70f7d9f8c7851358dc479 303 SUPERFAMILY SSF46689 245 294 5.38E-13 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS05230 6ada905ef0a70f7d9f8c7851358dc479 303 SMART SM00342 208 291 1.3E-35 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM393_RS10185 73e047d3fa0e9af4e875fc4421e585ab 442 SUPERFAMILY SSF103473 17 438 1.44E-76 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS10185 73e047d3fa0e9af4e875fc4421e585ab 442 Pfam PF07690 Major Facilitator Superfamily 35 396 1.5E-47 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS10185 73e047d3fa0e9af4e875fc4421e585ab 442 PIRSF PIRSF002808 6 442 2.7E-149 T 28-03-2018 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 AM393_RS10185 73e047d3fa0e9af4e875fc4421e585ab 442 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 36 413 1.7E-148 T 28-03-2018 AM393_RS10185 73e047d3fa0e9af4e875fc4421e585ab 442 ProSitePatterns PS00942 glpT family of transporters signature. 151 167 - T 28-03-2018 IPR021159 Glycerate/sugar phosphate transporter, conserved site GO:0005215|GO:0006810|GO:0016021 Reactome: R-HSA-70153 AM393_RS10185 73e047d3fa0e9af4e875fc4421e585ab 442 Gene3D G3DSA:1.20.1250.20 19 212 6.8E-32 T 28-03-2018 AM393_RS10185 73e047d3fa0e9af4e875fc4421e585ab 442 Gene3D G3DSA:1.20.1250.20 237 442 1.1E-26 T 28-03-2018 AM393_RS05985 f27e99642d4b9b466c929123f57ecba1 219 SUPERFAMILY SSF100950 2 146 1.26E-46 T 28-03-2018 AM393_RS05985 f27e99642d4b9b466c929123f57ecba1 219 SUPERFAMILY SSF75445 127 198 9.94E-24 T 28-03-2018 AM393_RS05985 f27e99642d4b9b466c929123f57ecba1 219 Gene3D G3DSA:3.30.70.260 138 196 4.2E-23 T 28-03-2018 AM393_RS05985 f27e99642d4b9b466c929123f57ecba1 219 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 6 215 9.7E-71 T 28-03-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AM393_RS05985 f27e99642d4b9b466c929123f57ecba1 219 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 3 217 34.143 T 28-03-2018 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AM393_RS05985 f27e99642d4b9b466c929123f57ecba1 219 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 49 213 2.9E-58 T 28-03-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AM393_RS05985 f27e99642d4b9b466c929123f57ecba1 219 Gene3D G3DSA:3.40.50.1360 1 137 1.9E-39 T 28-03-2018 AM393_RS14535 17ed485d2c38d0ab9c800d4643839336 302 Pfam PF01874 ATP:dephospho-CoA triphosphoribosyl transferase 25 291 5.9E-80 T 28-03-2018 IPR002736 Triphosphoribosyl-dephospho-CoA protein GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 AM393_RS14535 17ed485d2c38d0ab9c800d4643839336 302 Hamap MF_00397 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase [citG]. 1 302 164.394 T 28-03-2018 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 AM393_RS14535 17ed485d2c38d0ab9c800d4643839336 302 TIGRFAM TIGR03125 citrate_citG: triphosphoribosyl-dephospho-CoA synthase CitG 21 293 6.0E-104 T 28-03-2018 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 AM393_RS21240 e7ebf6a56bd559e4e47582411b01144f 644 Pfam PF08298 PrkA AAA domain 20 380 2.7E-179 T 28-03-2018 IPR013153 PrkA AAA domain AM393_RS21240 e7ebf6a56bd559e4e47582411b01144f 644 SUPERFAMILY SSF52540 75 145 6.48E-17 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS21240 e7ebf6a56bd559e4e47582411b01144f 644 SUPERFAMILY SSF52540 241 368 6.48E-17 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS21240 e7ebf6a56bd559e4e47582411b01144f 644 SMART SM00763 19 380 5.8E-219 T 28-03-2018 IPR013153 PrkA AAA domain AM393_RS21240 e7ebf6a56bd559e4e47582411b01144f 644 Pfam PF06798 PrkA serine protein kinase C-terminal domain 383 636 2.5E-75 T 28-03-2018 IPR010650 PrkA C-terminal domain AM393_RS21240 e7ebf6a56bd559e4e47582411b01144f 644 PIRSF PIRSF000549 1 644 3.3E-293 T 28-03-2018 IPR016230 Serine-protein kinase, PrkA GO:0004672 AM393_RS21240 e7ebf6a56bd559e4e47582411b01144f 644 Gene3D G3DSA:3.40.50.300 65 355 1.0E-13 T 28-03-2018 AM393_RS24895 d79131b65c68ad123731465b074d481a 308 ProSitePatterns PS00083 Intradiol ring-cleavage dioxygenases signature. 135 163 - T 28-03-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 AM393_RS24895 d79131b65c68ad123731465b074d481a 308 Pfam PF04444 Catechol dioxygenase N terminus 27 95 1.2E-22 T 28-03-2018 IPR007535 Catechol dioxygenase, N-terminal GO:0005506|GO:0009712|GO:0018576|GO:0055114 AM393_RS24895 d79131b65c68ad123731465b074d481a 308 Gene3D G3DSA:2.60.130.10 6 308 1.8E-69 T 28-03-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 AM393_RS24895 d79131b65c68ad123731465b074d481a 308 TIGRFAM TIGR02439 catechol_proteo: catechol 1,2-dioxygenase 9 289 4.1E-135 T 28-03-2018 IPR012801 Catechol 1,2-dioxygenase, proteobacteria GO:0005506|GO:0018576|GO:0019614|GO:0055114 KEGG: 00361+1.13.11.1|KEGG: 00362+1.13.11.1|KEGG: 00364+1.13.11.1|KEGG: 00623+1.13.11.1 AM393_RS24895 d79131b65c68ad123731465b074d481a 308 Pfam PF00775 Dioxygenase 105 289 9.5E-64 T 28-03-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 AM393_RS24895 d79131b65c68ad123731465b074d481a 308 SUPERFAMILY SSF49482 8 291 4.97E-94 T 28-03-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 AM393_RS06285 450df5bf098731ebad9f7dcb47d67a40 326 PIRSF PIRSF037112 2 326 4.6E-115 T 28-03-2018 IPR017113 Antirestriction, ArdC AM393_RS06285 450df5bf098731ebad9f7dcb47d67a40 326 Pfam PF08401 Domain of unknown function (DUF1738) 15 143 2.3E-37 T 28-03-2018 IPR013610 Domain of unknown function DUF1738 AM393_RS04940 d9b06f14fee060640427fc327b868011 450 Gene3D G3DSA:1.20.1250.20 241 445 9.5E-25 T 28-03-2018 AM393_RS04940 d9b06f14fee060640427fc327b868011 450 TIGRFAM TIGR00893 2A0114: D-galactonate transporter 27 436 2.1E-158 T 28-03-2018 IPR004744 D-galactonate transporter GO:0005215|GO:0006810|GO:0016021 AM393_RS04940 d9b06f14fee060640427fc327b868011 450 SUPERFAMILY SSF103473 12 444 3.01E-80 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS04940 d9b06f14fee060640427fc327b868011 450 Pfam PF07690 Major Facilitator Superfamily 25 318 4.0E-47 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS04940 d9b06f14fee060640427fc327b868011 450 Gene3D G3DSA:1.20.1250.20 10 216 6.3E-36 T 28-03-2018 AM393_RS04940 d9b06f14fee060640427fc327b868011 450 PIRSF PIRSF002808 2 448 2.4E-44 T 28-03-2018 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 AM393_RS16670 e202d089dd3271a187b0d93424afaa7c 232 SUPERFAMILY SSF55729 24 198 7.87E-39 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM393_RS16670 e202d089dd3271a187b0d93424afaa7c 232 Pfam PF13302 Acetyltransferase (GNAT) domain 33 174 1.6E-16 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AM393_RS16670 e202d089dd3271a187b0d93424afaa7c 232 Gene3D G3DSA:3.40.630.30 16 206 1.3E-28 T 28-03-2018 AM393_RS17575 e1f543156b83ebc985fc204e4bdd9982 433 SUPERFAMILY SSF51905 30 255 3.01E-37 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS17575 e1f543156b83ebc985fc204e4bdd9982 433 SUPERFAMILY SSF51905 347 397 3.01E-37 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS17575 e1f543156b83ebc985fc204e4bdd9982 433 Gene3D G3DSA:3.50.50.60 20 403 3.3E-32 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS17575 e1f543156b83ebc985fc204e4bdd9982 433 Pfam PF01266 FAD dependent oxidoreductase 31 385 1.4E-40 T 28-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AM393_RS24050 35435857539702a6f9753a71f25f047c 406 SUPERFAMILY SSF53850 16 320 2.26E-42 T 28-03-2018 AM393_RS24050 35435857539702a6f9753a71f25f047c 406 Gene3D G3DSA:3.40.190.10 19 139 3.4E-5 T 28-03-2018 AM393_RS24050 35435857539702a6f9753a71f25f047c 406 Gene3D G3DSA:3.40.190.10 140 301 3.1E-21 T 28-03-2018 AM393_RS24050 35435857539702a6f9753a71f25f047c 406 Pfam PF13343 Bacterial extracellular solute-binding protein 68 302 2.9E-33 T 28-03-2018 AM393_RS03250 4595e661ed0eab693bdda8a4bd0be541 410 Pfam PF04346 Ethanolamine utilisation protein, EutH 3 391 5.6E-140 T 28-03-2018 IPR007441 Ethanolamine utilisation protein EutH GO:0016021|GO:0034228|GO:0034229 AM393_RS03250 4595e661ed0eab693bdda8a4bd0be541 410 PIRSF PIRSF019466 1 408 6.8E-128 T 28-03-2018 IPR007441 Ethanolamine utilisation protein EutH GO:0016021|GO:0034228|GO:0034229 AM393_RS04585 f3692074b21dea16083e0577f0b8e307 114 TIGRFAM TIGR00100 hypA: hydrogenase nickel insertion protein HypA 1 114 2.0E-39 T 28-03-2018 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 AM393_RS04585 f3692074b21dea16083e0577f0b8e307 114 Hamap MF_00213 Probable hydrogenase nickel incorporation protein HypA [hypA]. 1 114 22.41 T 28-03-2018 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 AM393_RS04585 f3692074b21dea16083e0577f0b8e307 114 Pfam PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA 1 112 1.0E-29 T 28-03-2018 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 AM393_RS04585 f3692074b21dea16083e0577f0b8e307 114 PIRSF PIRSF004761 1 114 1.7E-34 T 28-03-2018 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 AM393_RS04585 f3692074b21dea16083e0577f0b8e307 114 ProSitePatterns PS01249 Hydrogenases expression/synthesis hypA family signature. 34 76 - T 28-03-2018 IPR020538 Hydrogenase nickel incorporation protein HypA/HybF, conserved site AM393_RS01155 65939b9c4bba5c1ddc18c6f5d3f6d732 376 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 4.4E-8 T 28-03-2018 AM393_RS01155 65939b9c4bba5c1ddc18c6f5d3f6d732 376 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 174 192 4.4E-8 T 28-03-2018 AM393_RS01155 65939b9c4bba5c1ddc18c6f5d3f6d732 376 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 299 321 4.4E-8 T 28-03-2018 AM393_RS01155 65939b9c4bba5c1ddc18c6f5d3f6d732 376 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 8 318 2.0E-92 T 28-03-2018 AM393_RS01155 65939b9c4bba5c1ddc18c6f5d3f6d732 376 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 6 28 1.3E-8 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM393_RS01155 65939b9c4bba5c1ddc18c6f5d3f6d732 376 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 170 194 1.3E-8 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM393_RS01155 65939b9c4bba5c1ddc18c6f5d3f6d732 376 Gene3D G3DSA:3.50.50.60 172 359 2.3E-14 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS01155 65939b9c4bba5c1ddc18c6f5d3f6d732 376 Gene3D G3DSA:3.50.50.60 2 167 6.4E-17 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS01155 65939b9c4bba5c1ddc18c6f5d3f6d732 376 SUPERFAMILY SSF51905 1 268 5.34E-26 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS06505 4a79c08e94f1db6d7ca0144cc789f227 246 Gene3D G3DSA:3.90.20.10 27 178 9.4E-6 T 28-03-2018 AM393_RS16290 0020890e119ae6ab2883a00cc4004cc5 179 Pfam PF11622 Protein of unknown function (DUF3251) 20 178 1.7E-76 T 28-03-2018 IPR021658 Domain of unknown function DUF3251 AM393_RS16290 0020890e119ae6ab2883a00cc4004cc5 179 Gene3D G3DSA:2.60.40.1620 43 174 1.4E-49 T 28-03-2018 IPR021658 Domain of unknown function DUF3251 AM393_RS10020 03bf50e94f5dd1a92d397c059dbc6698 374 Gene3D G3DSA:2.40.50.100 58 129 4.9E-17 T 28-03-2018 AM393_RS10020 03bf50e94f5dd1a92d397c059dbc6698 374 Pfam PF00529 HlyD membrane-fusion protein of T1SS 32 349 1.3E-8 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AM393_RS10020 03bf50e94f5dd1a92d397c059dbc6698 374 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 33 364 4.4E-81 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AM393_RS10020 03bf50e94f5dd1a92d397c059dbc6698 374 Gene3D G3DSA:2.40.50.100 161 364 1.9E-7 T 28-03-2018 AM393_RS10020 03bf50e94f5dd1a92d397c059dbc6698 374 SUPERFAMILY SSF111369 47 289 1.57E-77 T 28-03-2018 AM393_RS10020 03bf50e94f5dd1a92d397c059dbc6698 374 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 59 282 1.1E-13 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AM393_RS11950 f781fa2f153973e6cdf599581f4bfcf0 90 ProDom PD063639 YJBD CYTOPLASMIC STY4411 YPO2363 ECS5006 Y1969 3 90 1.0E-40 T 28-03-2018 IPR020317 Uncharacterised protein family YjbD AM393_RS11950 f781fa2f153973e6cdf599581f4bfcf0 90 Pfam PF11656 YjbD family (DUF3811) 3 90 7.8E-38 T 28-03-2018 IPR020317 Uncharacterised protein family YjbD AM393_RS14485 a700b8840498e52a87c791048d0bda81 234 Pfam PF00072 Response regulator receiver domain 7 117 3.3E-19 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM393_RS14485 a700b8840498e52a87c791048d0bda81 234 SUPERFAMILY SSF52172 1 150 5.12E-31 T 28-03-2018 IPR011006 CheY-like superfamily AM393_RS14485 a700b8840498e52a87c791048d0bda81 234 Gene3D G3DSA:3.40.50.2300 3 135 9.4E-26 T 28-03-2018 AM393_RS14485 a700b8840498e52a87c791048d0bda81 234 Pfam PF12431 Transcriptional regulator 134 162 5.4E-6 T 28-03-2018 IPR028141 Transcriptional regulator AM393_RS14485 a700b8840498e52a87c791048d0bda81 234 PIRSF PIRSF006171 2 230 9.1E-76 T 28-03-2018 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0001071|GO:0003677|GO:0005737|GO:0009605 AM393_RS14485 a700b8840498e52a87c791048d0bda81 234 Gene3D G3DSA:1.10.10.10 136 229 1.1E-4 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS14485 a700b8840498e52a87c791048d0bda81 234 SMART SM00448 4 117 1.5E-22 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM393_RS25080 85626c2d5a283f87c05ace6a246242ef 353 Gene3D G3DSA:2.130.10.10 31 353 6.1E-53 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 AM393_RS25080 85626c2d5a283f87c05ace6a246242ef 353 SUPERFAMILY SSF51004 38 341 1.65E-41 T 28-03-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain AM393_RS19870 b2df0c4714ed0aa2fc0e5f48d0fb546b 233 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 233 96.498 T 28-03-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 AM393_RS19870 b2df0c4714ed0aa2fc0e5f48d0fb546b 233 SUPERFAMILY SSF55729 2 228 1.59E-92 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM393_RS19870 b2df0c4714ed0aa2fc0e5f48d0fb546b 233 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 35 203 3.9E-71 T 28-03-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 AM393_RS19870 b2df0c4714ed0aa2fc0e5f48d0fb546b 233 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 32 218 9.5E-87 T 28-03-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 AM393_RS26400 0755a45956b2277cfe8492dfe62bfcc4 82 Pfam PF04226 Transglycosylase associated protein 33 81 3.5E-16 T 28-03-2018 IPR007341 Transglycosylase-associated protein GO:0016021 AM393_RS20655 b55809093bce73ed5fbb5353b11eb10c 84 Pfam PF13991 BssS protein family 11 81 7.0E-34 T 28-03-2018 IPR025730 Biofilm regulator BssS AM393_RS20655 b55809093bce73ed5fbb5353b11eb10c 84 ProDom PD060858 YCEP CYTOPLASMIC STY1199 ESCHERICHIA COLI SIMILAR ECS1438 1 84 3.0E-38 T 28-03-2018 IPR025730 Biofilm regulator BssS AM393_RS05870 b63bf03696da930c3a9d3a4b523e15c5 136 Pfam PF07254 Membrane-bound toxin component of toxin-antitoxin system 2 129 1.9E-54 T 28-03-2018 IPR009883 Inner membrane protein YgfX AM393_RS05870 b63bf03696da930c3a9d3a4b523e15c5 136 PIRSF PIRSF020653 1 136 2.5E-63 T 28-03-2018 IPR009883 Inner membrane protein YgfX AM393_RS05870 b63bf03696da930c3a9d3a4b523e15c5 136 ProDom PD083358 MEMBRANE YGFX INNER SIMILAR ECS3768 Y3281 ESCHERICHIA TRANSMEMBRANE YPO0896A STY3202 33 132 4.0E-36 T 28-03-2018 IPR009883 Inner membrane protein YgfX AM393_RS16680 e371972f4855686cbc6b3616d492661a 156 Pfam PF10777 Inner membrane protein YlaC 1 151 3.4E-68 T 28-03-2018 IPR019713 Inner membrane protein YlaC AM393_RS04805 2f2767d16f744483b8a0b16a9508a23e 208 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 130 145 - T 28-03-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 AM393_RS04805 2f2767d16f744483b8a0b16a9508a23e 208 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 5 206 9.0E-77 T 28-03-2018 AM393_RS04805 2f2767d16f744483b8a0b16a9508a23e 208 SUPERFAMILY SSF53335 11 204 1.02E-46 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM393_RS04805 2f2767d16f744483b8a0b16a9508a23e 208 Gene3D G3DSA:3.40.50.150 9 206 1.5E-35 T 28-03-2018 AM393_RS04805 2f2767d16f744483b8a0b16a9508a23e 208 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 1 208 39.028 T 28-03-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 AM393_RS04805 2f2767d16f744483b8a0b16a9508a23e 208 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 2 207 5.9E-93 T 28-03-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 AM393_RS26955 838985f76814d69efdfab8e8d839ad01 329 Pfam PF06834 TraU protein 27 328 3.5E-116 T 28-03-2018 IPR009649 TraU AM393_RS16720 5a031290ba8d8ec8160a1aa0974df673 299 Gene3D G3DSA:1.10.10.60 246 295 1.6E-4 T 28-03-2018 AM393_RS16720 5a031290ba8d8ec8160a1aa0974df673 299 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 8 295 2.3E-56 T 28-03-2018 IPR010106 Recombination-promoting nuclease RpnA AM393_RS16720 5a031290ba8d8ec8160a1aa0974df673 299 Pfam PF04754 Putative transposase, YhgA-like 7 208 3.0E-84 T 28-03-2018 IPR006842 Transposase (putative), YhgA-like AM393_RS15430 a2985afbc03ff3873e755bce798b2a1a 181 SUPERFAMILY SSF52980 4 178 8.58E-69 T 28-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AM393_RS15430 a2985afbc03ff3873e755bce798b2a1a 181 Pfam PF07152 YaeQ protein 1 173 3.8E-70 T 28-03-2018 IPR009822 YaeQ AM393_RS15430 a2985afbc03ff3873e755bce798b2a1a 181 PIRSF PIRSF011484 1 181 5.2E-64 T 28-03-2018 IPR009822 YaeQ AM393_RS15430 a2985afbc03ff3873e755bce798b2a1a 181 Gene3D G3DSA:3.10.640.10 2 177 1.4E-73 T 28-03-2018 AM393_RS15430 a2985afbc03ff3873e755bce798b2a1a 181 SMART SM01322 1 176 5.9E-110 T 28-03-2018 IPR009822 YaeQ AM393_RS03760 142ce6e92a60711c657edd8e48870069 126 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 3 126 5.9E-38 T 28-03-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 AM393_RS03760 142ce6e92a60711c657edd8e48870069 126 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 5 122 2.4E-24 T 28-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 AM393_RS03760 142ce6e92a60711c657edd8e48870069 126 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 23 125 3.0E-30 T 28-03-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 AM393_RS03760 142ce6e92a60711c657edd8e48870069 126 SUPERFAMILY SSF56214 3 125 1.7E-29 T 28-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 AM393_RS03760 142ce6e92a60711c657edd8e48870069 126 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 4 126 26.026 T 28-03-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 AM393_RS03760 142ce6e92a60711c657edd8e48870069 126 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 2 126 3.1E-56 T 28-03-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 AM393_RS03760 142ce6e92a60711c657edd8e48870069 126 Gene3D G3DSA:3.90.470.20 1 126 1.8E-36 T 28-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 AM393_RS14960 a59d833abb304f9484e66ca9ea25d067 456 ProSitePatterns PS00218 Amino acid permeases signature. 43 73 - T 28-03-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 AM393_RS14960 a59d833abb304f9484e66ca9ea25d067 456 PIRSF PIRSF006060 1 452 1.2E-76 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AM393_RS14960 a59d833abb304f9484e66ca9ea25d067 456 Pfam PF00324 Amino acid permease 18 448 2.7E-125 T 28-03-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 AM393_RS23015 fcca1db5691b1c542739534032b0b816 228 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 1 220 4.7E-118 T 28-03-2018 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 Reactome: R-HSA-77108 AM393_RS23015 fcca1db5691b1c542739534032b0b816 228 Pfam PF01144 Coenzyme A transferase 7 217 1.7E-69 T 28-03-2018 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 Reactome: R-HSA-77108 AM393_RS23015 fcca1db5691b1c542739534032b0b816 228 ProSitePatterns PS01273 Coenzyme A transferases signature 1. 18 33 - T 28-03-2018 IPR004163 Coenzyme A transferase binding site GO:0008152|GO:0008410 Reactome: R-HSA-77108 AM393_RS23015 fcca1db5691b1c542739534032b0b816 228 Gene3D G3DSA:3.40.1080.10 2 226 9.0E-80 T 28-03-2018 AM393_RS23015 fcca1db5691b1c542739534032b0b816 228 SMART SM00882 6 219 5.3E-80 T 28-03-2018 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 Reactome: R-HSA-77108 AM393_RS23015 fcca1db5691b1c542739534032b0b816 228 SUPERFAMILY SSF100950 2 221 5.02E-78 T 28-03-2018 AM393_RS09085 6222dd336bb64823c84a6f3e9f6c54f3 423 Pfam PF01569 PAP2 superfamily 179 284 1.2E-13 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AM393_RS09085 6222dd336bb64823c84a6f3e9f6c54f3 423 Gene3D G3DSA:1.20.144.10 75 314 5.5E-31 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AM393_RS09085 6222dd336bb64823c84a6f3e9f6c54f3 423 SMART SM00014 173 292 5.2E-7 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AM393_RS09085 6222dd336bb64823c84a6f3e9f6c54f3 423 SUPERFAMILY SSF48317 104 309 3.4E-31 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AM393_RS08210 cd2ade55df70dfcee4574b32401de264 129 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 10 126 1.8E-55 T 28-03-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM393_RS08210 cd2ade55df70dfcee4574b32401de264 129 Pfam PF00411 Ribosomal protein S11 19 128 1.6E-54 T 28-03-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 AM393_RS08210 cd2ade55df70dfcee4574b32401de264 129 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 7 129 32.772 T 28-03-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 AM393_RS08210 cd2ade55df70dfcee4574b32401de264 129 ProSitePatterns PS00054 Ribosomal protein S11 signature. 97 119 - T 28-03-2018 IPR018102 Ribosomal S11, conserved site AM393_RS08210 cd2ade55df70dfcee4574b32401de264 129 SUPERFAMILY SSF53137 14 129 3.79E-48 T 28-03-2018 AM393_RS08210 cd2ade55df70dfcee4574b32401de264 129 Gene3D G3DSA:3.30.420.80 5 129 4.1E-45 T 28-03-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 AM393_RS08210 cd2ade55df70dfcee4574b32401de264 129 PIRSF PIRSF002131 1 129 5.9E-53 T 28-03-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 AM393_RS12270 3f36413e380662e3337b69c706d4b52e 135 Pfam PF03788 LrgA family 32 122 3.9E-24 T 28-03-2018 IPR005538 LrgA/CidA family GO:0016021 AM393_RS28915 e3ba37ea3a2af895f863939de28cb3f7 146 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 110 144 9.2E-10 T 28-03-2018 IPR001451 Hexapeptide repeat AM393_RS28915 e3ba37ea3a2af895f863939de28cb3f7 146 SUPERFAMILY SSF51161 18 146 1.15E-25 T 28-03-2018 IPR011004 Trimeric LpxA-like AM393_RS28915 e3ba37ea3a2af895f863939de28cb3f7 146 Gene3D G3DSA:2.160.10.10 1 146 2.8E-25 T 28-03-2018 AM393_RS04085 6227a9b86b5f3492be72e59b92d9d676 159 Gene3D G3DSA:1.10.10.10 2 146 2.8E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS04085 6227a9b86b5f3492be72e59b92d9d676 159 Pfam PF02082 Transcriptional regulator 2 82 2.1E-13 T 28-03-2018 IPR000944 Transcription regulator Rrf2-type AM393_RS04085 6227a9b86b5f3492be72e59b92d9d676 159 SUPERFAMILY SSF46785 1 135 2.72E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS15035 f3176e58d7ea4b2d4fadff016207a12b 280 Gene3D G3DSA:1.20.5.1000 200 265 0.0016 T 28-03-2018 AM393_RS15035 f3176e58d7ea4b2d4fadff016207a12b 280 Gene3D G3DSA:1.20.5.1000 114 199 0.0013 T 28-03-2018 AM393_RS15035 f3176e58d7ea4b2d4fadff016207a12b 280 SUPERFAMILY SSF90257 148 252 2.88E-5 T 28-03-2018 AM393_RS24610 c3381133d144cf889b9d42e9e6655400 104 Gene3D G3DSA:1.20.58.80 1 99 2.6E-31 T 28-03-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 AM393_RS24610 c3381133d144cf889b9d42e9e6655400 104 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 6 97 3.5E-31 T 28-03-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 AM393_RS24610 c3381133d144cf889b9d42e9e6655400 104 PIRSF PIRSF000699 1 104 1.6E-30 T 28-03-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 AM393_RS24610 c3381133d144cf889b9d42e9e6655400 104 SUPERFAMILY SSF46973 1 98 1.96E-32 T 28-03-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 AM393_RS01115 81d7c94b951675e7e55f18e4d4aebb3a 269 Gene3D G3DSA:1.10.3670.10 28 134 1.3E-31 T 28-03-2018 AM393_RS01115 81d7c94b951675e7e55f18e4d4aebb3a 269 Gene3D G3DSA:2.30.260.10 135 265 9.2E-29 T 28-03-2018 AM393_RS01115 81d7c94b951675e7e55f18e4d4aebb3a 269 SUPERFAMILY SSF54001 30 263 5.59E-76 T 28-03-2018 AM393_RS01115 81d7c94b951675e7e55f18e4d4aebb3a 269 Pfam PF07313 Protein of unknown function (DUF1460) 59 256 1.5E-77 T 28-03-2018 IPR010846 Protein of unknown function DUF1460 AM393_RS06370 9a1f930644a7121e9ca8e6d539d24ac2 473 TIGRFAM TIGR03755 conj_TIGR03755: integrating conjugative element protein, PFL_4711 family 49 463 4.2E-157 T 28-03-2018 IPR021204 Integrating conjugative element protein, PFL4711 AM393_RS18970 8dfcbd6c1a67d011849567f755cd9211 460 PIRSF PIRSF006060 1 458 4.6E-67 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AM393_RS18970 8dfcbd6c1a67d011849567f755cd9211 460 Pfam PF00324 Amino acid permease 17 455 1.9E-97 T 28-03-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 AM393_RS18970 8dfcbd6c1a67d011849567f755cd9211 460 ProSitePatterns PS00218 Amino acid permeases signature. 42 72 - T 28-03-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 AM393_RS20175 41d9bb7bf871e6d4c2705edbbbcf73dc 422 Pfam PF04403 Paraquat-inducible protein A 49 200 2.1E-38 T 28-03-2018 IPR007498 Paraquat-inducible protein A AM393_RS20175 41d9bb7bf871e6d4c2705edbbbcf73dc 422 Pfam PF04403 Paraquat-inducible protein A 253 408 3.6E-54 T 28-03-2018 IPR007498 Paraquat-inducible protein A AM393_RS20175 41d9bb7bf871e6d4c2705edbbbcf73dc 422 Gene3D G3DSA:2.10.230.10 10 248 0.0024 T 28-03-2018 AM393_RS20175 41d9bb7bf871e6d4c2705edbbbcf73dc 422 TIGRFAM TIGR00155 pqiA_fam: integral membrane protein, PqiA family 1 408 1.2E-177 T 28-03-2018 IPR005219 Conserved hypothetical protein CHP00155 AM393_RS00515 4cbbf64764e824bdc3de3a974f8d4242 877 Pfam PF02470 MlaD protein 747 810 2.4E-9 T 28-03-2018 IPR003399 Mce/MlaD AM393_RS00515 4cbbf64764e824bdc3de3a974f8d4242 877 Pfam PF02470 MlaD protein 163 229 4.3E-7 T 28-03-2018 IPR003399 Mce/MlaD AM393_RS00515 4cbbf64764e824bdc3de3a974f8d4242 877 Pfam PF02470 MlaD protein 46 137 8.3E-16 T 28-03-2018 IPR003399 Mce/MlaD AM393_RS00515 4cbbf64764e824bdc3de3a974f8d4242 877 Pfam PF02470 MlaD protein 636 724 7.8E-9 T 28-03-2018 IPR003399 Mce/MlaD AM393_RS00515 4cbbf64764e824bdc3de3a974f8d4242 877 Pfam PF02470 MlaD protein 280 348 6.7E-8 T 28-03-2018 IPR003399 Mce/MlaD AM393_RS27030 2785b244006b31c85f868056be49ed93 188 TIGRFAM TIGR02761 TraE_TIGR: type IV conjugative transfer system protein TraE 1 180 1.6E-52 T 28-03-2018 IPR007973 Pilus assembly TraE GO:0000746 AM393_RS27030 2785b244006b31c85f868056be49ed93 188 Pfam PF05309 TraE protein 1 182 2.0E-60 T 28-03-2018 IPR007973 Pilus assembly TraE GO:0000746 AM393_RS07485 4c6a4ae10731be9bdae1326a9f43e4b3 133 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 1 119 4.5E-45 T 28-03-2018 IPR000238 Ribosome-binding factor A GO:0006364 AM393_RS07485 4c6a4ae10731be9bdae1326a9f43e4b3 133 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 9 100 2.0E-46 T 28-03-2018 IPR000238 Ribosome-binding factor A GO:0006364 AM393_RS07485 4c6a4ae10731be9bdae1326a9f43e4b3 133 Pfam PF02033 Ribosome-binding factor A 7 112 2.2E-33 T 28-03-2018 IPR000238 Ribosome-binding factor A GO:0006364 AM393_RS07485 4c6a4ae10731be9bdae1326a9f43e4b3 133 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 3 120 23.272 T 28-03-2018 IPR000238 Ribosome-binding factor A GO:0006364 AM393_RS07485 4c6a4ae10731be9bdae1326a9f43e4b3 133 SUPERFAMILY SSF89919 2 107 6.54E-36 T 28-03-2018 IPR023799 Ribosome-binding factor A domain AM393_RS07485 4c6a4ae10731be9bdae1326a9f43e4b3 133 ProSitePatterns PS01319 Ribosome-binding factor A signature. 79 100 - T 28-03-2018 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 AM393_RS07485 4c6a4ae10731be9bdae1326a9f43e4b3 133 Gene3D G3DSA:3.30.300.20 1 106 7.3E-36 T 28-03-2018 IPR015946 K homology domain-like, alpha/beta AM393_RS26785 d13d529c7d4f772f4c1f2ff6aedc2a90 117 Gene3D G3DSA:3.40.1260.10 1 117 1.2E-28 T 28-03-2018 AM393_RS26785 d13d529c7d4f772f4c1f2ff6aedc2a90 117 SUPERFAMILY SSF75169 1 117 7.72E-34 T 28-03-2018 IPR027396 DsrEFH-like AM393_RS26785 d13d529c7d4f772f4c1f2ff6aedc2a90 117 Pfam PF02635 DsrE/DsrF-like family 3 117 1.2E-22 T 28-03-2018 IPR003787 Sulphur relay, DsrE/F-like protein AM393_RS01305 1f4940f1ea7b2d0acf2a6a07987330ff 55 Gene3D G3DSA:1.20.1280.40 1 54 3.4E-19 T 28-03-2018 IPR007985 Haemolysin expression modulating, HHA AM393_RS01305 1f4940f1ea7b2d0acf2a6a07987330ff 55 SUPERFAMILY SSF68989 6 55 1.19E-20 T 28-03-2018 IPR007985 Haemolysin expression modulating, HHA AM393_RS01305 1f4940f1ea7b2d0acf2a6a07987330ff 55 Pfam PF05321 Haemolysin expression modulating protein 7 52 2.7E-18 T 28-03-2018 IPR007985 Haemolysin expression modulating, HHA AM393_RS24395 6dfcddc500ed0eda6da34f4b78769969 169 Pfam PF00857 Isochorismatase family 11 156 2.7E-28 T 28-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AM393_RS24395 6dfcddc500ed0eda6da34f4b78769969 169 Gene3D G3DSA:3.40.50.850 10 162 5.7E-30 T 28-03-2018 AM393_RS24395 6dfcddc500ed0eda6da34f4b78769969 169 SUPERFAMILY SSF52499 11 160 7.98E-38 T 28-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AM393_RS19250 c1b01da4ec86d185f0d0302617e0cf45 370 Pfam PF03600 Citrate transporter 21 304 7.2E-24 T 28-03-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 AM393_RS00285 83f4594762d0f504931c756f89da3bc6 432 Hamap MF_01202 D-amino acid dehydrogenase [dadA]. 1 410 53.916 T 28-03-2018 IPR023080 D-amino acid dehydrogenase DadA GO:0008718|GO:0019478|GO:0055114 AM393_RS00285 83f4594762d0f504931c756f89da3bc6 432 Gene3D G3DSA:3.50.50.60 1 426 4.2E-47 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS00285 83f4594762d0f504931c756f89da3bc6 432 SUPERFAMILY SSF54373 269 359 2.09E-16 T 28-03-2018 AM393_RS00285 83f4594762d0f504931c756f89da3bc6 432 SUPERFAMILY SSF51905 107 271 2.2E-54 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS00285 83f4594762d0f504931c756f89da3bc6 432 SUPERFAMILY SSF51905 1 54 2.2E-54 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS00285 83f4594762d0f504931c756f89da3bc6 432 SUPERFAMILY SSF51905 359 419 2.2E-54 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS00285 83f4594762d0f504931c756f89da3bc6 432 Pfam PF01266 FAD dependent oxidoreductase 2 397 7.8E-73 T 28-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AM393_RS15675 c8e774e507f63e77e54333ea89bc8298 132 Pfam PF07417 Transcriptional regulator Crl 6 122 8.8E-53 T 28-03-2018 IPR009986 Sigma factor-binding protein Crl GO:0005737|GO:0045893 AM393_RS15675 c8e774e507f63e77e54333ea89bc8298 132 Hamap MF_01178 Sigma factor-binding protein Crl [crl]. 1 128 31.555 T 28-03-2018 IPR009986 Sigma factor-binding protein Crl GO:0005737|GO:0045893 AM393_RS03450 8e4d7818549b7e110b4d8657a99f19cb 213 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 3 188 31.66 T 28-03-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 AM393_RS03450 8e4d7818549b7e110b4d8657a99f19cb 213 Gene3D G3DSA:3.40.50.170 2 199 5.1E-68 T 28-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AM393_RS03450 8e4d7818549b7e110b4d8657a99f19cb 213 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 2 192 2.2E-80 T 28-03-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 AM393_RS03450 8e4d7818549b7e110b4d8657a99f19cb 213 Pfam PF00551 Formyl transferase 2 182 1.6E-65 T 28-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AM393_RS03450 8e4d7818549b7e110b4d8657a99f19cb 213 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 134 157 - T 28-03-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AM393_RS03450 8e4d7818549b7e110b4d8657a99f19cb 213 SUPERFAMILY SSF53328 2 204 4.32E-65 T 28-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AM393_RS27325 958938e071df9c28deede08bb1418cc8 246 SUPERFAMILY SSF56349 47 217 1.15E-27 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AM393_RS27325 958938e071df9c28deede08bb1418cc8 246 Gene3D G3DSA:1.10.443.10 43 224 3.4E-28 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM393_RS27325 958938e071df9c28deede08bb1418cc8 246 PIRSF PIRSF004576 1 241 9.9E-113 T 28-03-2018 IPR016423 Resolvase, Rsv AM393_RS27325 958938e071df9c28deede08bb1418cc8 246 Pfam PF00589 Phage integrase family 44 216 3.0E-28 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM393_RS09825 08341559dbb559cd2033fbd5558cbf8f 142 Pfam PF05656 Protein of unknown function (DUF805) 8 132 2.4E-20 T 28-03-2018 IPR008523 Protein of unknown function DUF805 GO:0016021 AM393_RS14290 7887fe0a04533824aceec1c607503c57 215 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 6 15 - T 28-03-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 AM393_RS14290 7887fe0a04533824aceec1c607503c57 215 SUPERFAMILY SSF53254 1 208 1.44E-56 T 28-03-2018 IPR029033 Histidine phosphatase superfamily AM393_RS14290 7887fe0a04533824aceec1c607503c57 215 SMART SM00855 3 157 2.0E-21 T 28-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AM393_RS14290 7887fe0a04533824aceec1c607503c57 215 Hamap MF_01040 Probable phosphoglycerate mutase GpmB [gpmB]. 1 215 58.258 T 28-03-2018 IPR023086 Phosphoglycerate mutase, GpmB, probable GO:0004619|GO:0006096 AM393_RS14290 7887fe0a04533824aceec1c607503c57 215 PIRSF PIRSF000709 2 173 6.2E-9 T 28-03-2018 AM393_RS14290 7887fe0a04533824aceec1c607503c57 215 Gene3D G3DSA:3.40.50.1240 1 214 1.5E-53 T 28-03-2018 IPR029033 Histidine phosphatase superfamily AM393_RS14290 7887fe0a04533824aceec1c607503c57 215 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 194 1.4E-56 T 28-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AM393_RS26640 3c040012e62d0b964d2cb9d6de46fb9f 205 PIRSF PIRSF035805 1 201 2.9E-54 T 28-03-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 AM393_RS26640 3c040012e62d0b964d2cb9d6de46fb9f 205 SUPERFAMILY SSF52540 1 141 1.3E-39 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS26640 3c040012e62d0b964d2cb9d6de46fb9f 205 Pfam PF00265 Thymidine kinase 2 186 6.8E-63 T 28-03-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 AM393_RS26640 3c040012e62d0b964d2cb9d6de46fb9f 205 Gene3D G3DSA:3.40.50.300 2 141 1.8E-44 T 28-03-2018 AM393_RS26640 3c040012e62d0b964d2cb9d6de46fb9f 205 SUPERFAMILY SSF57716 142 189 7.6E-15 T 28-03-2018 AM393_RS26640 3c040012e62d0b964d2cb9d6de46fb9f 205 Gene3D G3DSA:3.30.60.20 142 192 5.8E-17 T 28-03-2018 AM393_RS26640 3c040012e62d0b964d2cb9d6de46fb9f 205 Hamap MF_00124 Thymidine kinase [tdk]. 1 189 34.219 T 28-03-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 AM393_RS00555 04efe4a9f4e7beba9a6d63bc7309e827 142 Gene3D G3DSA:2.30.30.110 10 142 1.2E-9 T 28-03-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor AM393_RS00555 04efe4a9f4e7beba9a6d63bc7309e827 142 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 13 89 4.2E-6 T 28-03-2018 IPR003477 mRNA interferase PemK-like GO:0003677 AM393_RS00555 04efe4a9f4e7beba9a6d63bc7309e827 142 SUPERFAMILY SSF50118 11 97 1.07E-6 T 28-03-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor AM393_RS27095 365a698fbb49be8053b626474393b5e3 137 Gene3D G3DSA:1.10.260.40 71 137 1.9E-8 T 28-03-2018 AM393_RS27095 365a698fbb49be8053b626474393b5e3 137 SUPERFAMILY SSF47413 81 136 2.62E-7 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM393_RS27095 365a698fbb49be8053b626474393b5e3 137 Pfam PF01381 Helix-turn-helix 83 132 1.6E-6 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM393_RS27095 365a698fbb49be8053b626474393b5e3 137 SMART SM00530 81 135 2.1E-5 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM393_RS13650 25b04762d3f7cbc0ce28b2279fb10059 114 Pfam PF11604 Copper binding periplasmic protein CusF 47 108 3.6E-24 T 28-03-2018 IPR021647 Copper binding periplasmic protein CusF AM393_RS28175 a751f21bc51b376c00c8302ff347fdff 234 Pfam PF11393 Type-IV b secretion system, inner-membrane complex component 61 230 1.4E-43 T 28-03-2018 IPR021055 Type-IV b secretion system, inner-membrane complex component AM393_RS08980 9fc264b479eed36b8f30651bda9310d3 551 Pfam PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase 4 237 3.7E-50 T 28-03-2018 IPR003342 Glycosyl transferase family 39/83 GO:0000030|GO:0006493|GO:0016020 Reactome: R-HSA-5173105 AM393_RS08980 9fc264b479eed36b8f30651bda9310d3 551 Hamap MF_01165 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase [arnT]. 1 551 43.827 T 28-03-2018 IPR022839 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase GO:0016763 AM393_RS15345 8c372feedc33fbdde8d474b09ef75268 252 Gene3D G3DSA:3.40.1180.10 2 247 1.2E-89 T 28-03-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 AM393_RS15345 8c372feedc33fbdde8d474b09ef75268 252 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 189 206 - T 28-03-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199 AM393_RS15345 8c372feedc33fbdde8d474b09ef75268 252 Pfam PF01255 Putative undecaprenyl diphosphate synthase 23 243 4.1E-79 T 28-03-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 AM393_RS15345 8c372feedc33fbdde8d474b09ef75268 252 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 18 243 4.5E-102 T 28-03-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 AM393_RS15345 8c372feedc33fbdde8d474b09ef75268 252 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 16 244 39.152 T 28-03-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 AM393_RS15345 8c372feedc33fbdde8d474b09ef75268 252 SUPERFAMILY SSF64005 18 239 2.22E-84 T 28-03-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 AM393_RS18580 05989899ad507107f0d99ce378af7d99 559 Hamap MF_00275 Potassium-transporting ATPase potassium-binding subunit [kdpA]. 2 558 35.516 T 28-03-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 AM393_RS18580 05989899ad507107f0d99ce378af7d99 559 TIGRFAM TIGR00680 kdpA: K+-transporting ATPase, A subunit 1 558 3.1E-274 T 28-03-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 AM393_RS18580 05989899ad507107f0d99ce378af7d99 559 Pfam PF03814 Potassium-transporting ATPase A subunit 12 556 6.8E-243 T 28-03-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 AM393_RS18580 05989899ad507107f0d99ce378af7d99 559 PIRSF PIRSF001294 1 559 1.8E-236 T 28-03-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 AM393_RS20400 cb14c3756ebf72ff051541e5c4321c9c 262 Gene3D G3DSA:3.40.50.720 2 258 6.8E-46 T 28-03-2018 AM393_RS20400 cb14c3756ebf72ff051541e5c4321c9c 262 Pfam PF00106 short chain dehydrogenase 7 192 2.6E-41 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS20400 cb14c3756ebf72ff051541e5c4321c9c 262 SUPERFAMILY SSF51735 6 232 5.21E-54 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS20400 cb14c3756ebf72ff051541e5c4321c9c 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 3.0E-23 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS20400 cb14c3756ebf72ff051541e5c4321c9c 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 3.0E-23 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS20400 cb14c3756ebf72ff051541e5c4321c9c 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 3.0E-23 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS20400 cb14c3756ebf72ff051541e5c4321c9c 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 3.0E-23 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS20400 cb14c3756ebf72ff051541e5c4321c9c 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 3.0E-23 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS20400 cb14c3756ebf72ff051541e5c4321c9c 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 5.1E-11 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS20400 cb14c3756ebf72ff051541e5c4321c9c 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 5.1E-11 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS20400 cb14c3756ebf72ff051541e5c4321c9c 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 5.1E-11 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS20400 cb14c3756ebf72ff051541e5c4321c9c 262 PIRSF PIRSF000126 1 262 7.2E-72 T 28-03-2018 AM393_RS07035 b4ae9f075931137f49e26a4c8f4e27bb 176 Pfam PF01923 Cobalamin adenosyltransferase 4 167 9.3E-50 T 28-03-2018 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741 AM393_RS07035 b4ae9f075931137f49e26a4c8f4e27bb 176 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 10 139 1.0E-69 T 28-03-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741 AM393_RS07035 b4ae9f075931137f49e26a4c8f4e27bb 176 Gene3D G3DSA:1.20.1200.10 13 174 4.9E-47 T 28-03-2018 AM393_RS07035 b4ae9f075931137f49e26a4c8f4e27bb 176 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 5 171 9.0E-49 T 28-03-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741 AM393_RS07035 b4ae9f075931137f49e26a4c8f4e27bb 176 SUPERFAMILY SSF89028 3 171 3.14E-54 T 28-03-2018 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741 AM393_RS04835 e4cd2e8835ac2282c746bd63d2b15958 108 ProDom PD070788 MEMBRANE OXIDASE SUBUNIT CYTOCHROME YGBE INNER STY3057 TRANSMEMBRANE 20 96 7.0E-36 T 28-03-2018 IPR022721 Protein of unknown function DUF3561 AM393_RS04835 e4cd2e8835ac2282c746bd63d2b15958 108 Pfam PF12084 Protein of unknown function (DUF3561) 1 108 1.8E-47 T 28-03-2018 IPR022721 Protein of unknown function DUF3561 AM393_RS14880 41c1d966a7d72c0e150bbc2dd6632022 305 Hamap MF_00388 UDP-3-O-acyl-N-acetylglucosamine deacetylase [lpxC]. 2 280 46.122 T 28-03-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AM393_RS14880 41c1d966a7d72c0e150bbc2dd6632022 305 SUPERFAMILY SSF54211 134 278 4.78E-54 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM393_RS14880 41c1d966a7d72c0e150bbc2dd6632022 305 Gene3D G3DSA:3.30.230.20 1 128 2.2E-48 T 28-03-2018 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AM393_RS14880 41c1d966a7d72c0e150bbc2dd6632022 305 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2 301 8.8E-163 T 28-03-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AM393_RS14880 41c1d966a7d72c0e150bbc2dd6632022 305 Gene3D G3DSA:3.30.1700.10 129 299 2.0E-70 T 28-03-2018 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AM393_RS14880 41c1d966a7d72c0e150bbc2dd6632022 305 SUPERFAMILY SSF54211 3 124 1.06E-41 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM393_RS14880 41c1d966a7d72c0e150bbc2dd6632022 305 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 276 9.1E-109 T 28-03-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AM393_RS23060 091089158b2692b7e83d214703aeeb40 550 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 74 325 2.8E-31 T 28-03-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 AM393_RS23060 091089158b2692b7e83d214703aeeb40 550 Pfam PF05681 Fumarate hydratase (Fumerase) 51 326 7.5E-86 T 28-03-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 AM393_RS23060 091089158b2692b7e83d214703aeeb40 550 SUPERFAMILY SSF117457 361 536 3.92E-60 T 28-03-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 AM393_RS23060 091089158b2692b7e83d214703aeeb40 550 Pfam PF05683 Fumarase C-terminus 332 537 4.2E-92 T 28-03-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 AM393_RS23060 091089158b2692b7e83d214703aeeb40 550 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 373 537 1.5E-62 T 28-03-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 AM393_RS23060 091089158b2692b7e83d214703aeeb40 550 PIRSF PIRSF001394 30 550 5.6E-230 T 28-03-2018 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384 AM393_RS23060 091089158b2692b7e83d214703aeeb40 550 Gene3D G3DSA:3.20.130.10 359 536 5.7E-67 T 28-03-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 AM393_RS06645 1ab305ca6a4d520be881d2b2f69a18f8 186 Gene3D G3DSA:3.40.30.10 7 185 3.2E-17 T 28-03-2018 AM393_RS06645 1ab305ca6a4d520be881d2b2f69a18f8 186 Pfam PF13462 Thioredoxin 18 166 1.8E-5 T 28-03-2018 IPR012336 Thioredoxin-like fold AM393_RS06645 1ab305ca6a4d520be881d2b2f69a18f8 186 SUPERFAMILY SSF52833 132 169 2.42E-11 T 28-03-2018 IPR012336 Thioredoxin-like fold AM393_RS06645 1ab305ca6a4d520be881d2b2f69a18f8 186 SUPERFAMILY SSF52833 12 101 2.42E-11 T 28-03-2018 IPR012336 Thioredoxin-like fold AM393_RS09600 a8b80b0a3bee17c3f9815c7513b203f5 315 Pfam PF04748 Divergent polysaccharide deacetylase 28 238 8.2E-77 T 28-03-2018 IPR006837 Divergent polysaccharide deacetylase AM393_RS09600 a8b80b0a3bee17c3f9815c7513b203f5 315 SUPERFAMILY SSF88713 24 238 6.78E-74 T 28-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AM393_RS09600 a8b80b0a3bee17c3f9815c7513b203f5 315 Gene3D G3DSA:3.20.20.370 17 241 1.7E-81 T 28-03-2018 AM393_RS05760 b4d652ca38ee22a3a4ed9f6392786df8 140 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 3 115 7.9E-39 T 28-03-2018 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 AM393_RS05760 b4d652ca38ee22a3a4ed9f6392786df8 140 Gene3D G3DSA:3.40.30.10 1 140 2.9E-42 T 28-03-2018 AM393_RS05760 b4d652ca38ee22a3a4ed9f6392786df8 140 Pfam PF03960 ArsC family 6 114 1.4E-18 T 28-03-2018 IPR006660 Arsenate reductase-like AM393_RS05760 b4d652ca38ee22a3a4ed9f6392786df8 140 SUPERFAMILY SSF52833 2 136 1.62E-38 T 28-03-2018 IPR012336 Thioredoxin-like fold AM393_RS12515 fb32ad513ab90ed9ad9cb9a317208f69 261 Pfam PF13462 Thioredoxin 88 229 4.0E-12 T 28-03-2018 IPR012336 Thioredoxin-like fold AM393_RS12515 fb32ad513ab90ed9ad9cb9a317208f69 261 Gene3D G3DSA:3.40.30.10 79 261 3.3E-28 T 28-03-2018 AM393_RS12515 fb32ad513ab90ed9ad9cb9a317208f69 261 SUPERFAMILY SSF52833 79 257 2.81E-30 T 28-03-2018 IPR012336 Thioredoxin-like fold AM393_RS18620 13824056f332a9721c962761d397d495 247 Pfam PF03746 LamB/YcsF family 3 235 3.0E-92 T 28-03-2018 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF AM393_RS18620 13824056f332a9721c962761d397d495 247 Hamap MF_00691 UPF0271 protein YbgL [ybgL]. 1 240 42.267 T 28-03-2018 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF AM393_RS18620 13824056f332a9721c962761d397d495 247 SUPERFAMILY SSF88713 1 242 4.0E-91 T 28-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AM393_RS18620 13824056f332a9721c962761d397d495 247 Gene3D G3DSA:3.20.20.370 2 244 7.3E-97 T 28-03-2018 AM393_RS06870 ea673f4ecc115a9041c3be4455a016a2 127 TIGRFAM TIGR00526 folB_dom: FolB domain 1 115 1.8E-40 T 28-03-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 AM393_RS06870 ea673f4ecc115a9041c3be4455a016a2 127 SUPERFAMILY SSF55620 1 114 5.56E-37 T 28-03-2018 AM393_RS06870 ea673f4ecc115a9041c3be4455a016a2 127 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 4 114 5.6E-28 T 28-03-2018 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 AM393_RS06870 ea673f4ecc115a9041c3be4455a016a2 127 Gene3D G3DSA:3.30.1130.10 1 122 1.4E-36 T 28-03-2018 AM393_RS06870 ea673f4ecc115a9041c3be4455a016a2 127 Pfam PF02152 Dihydroneopterin aldolase 4 113 4.9E-32 T 28-03-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 AM393_RS06870 ea673f4ecc115a9041c3be4455a016a2 127 SMART SM00905 4 114 2.1E-48 T 28-03-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 AM393_RS09275 b5eeaf07a3fed451a0ed54f9913d695e 535 PIRSF PIRSF002741 21 535 2.3E-122 T 28-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AM393_RS09275 b5eeaf07a3fed451a0ed54f9913d695e 535 Gene3D G3DSA:3.40.190.10 204 299 4.5E-30 T 28-03-2018 AM393_RS09275 b5eeaf07a3fed451a0ed54f9913d695e 535 SUPERFAMILY SSF53850 29 534 3.08E-164 T 28-03-2018 AM393_RS09275 b5eeaf07a3fed451a0ed54f9913d695e 535 Gene3D G3DSA:3.10.105.10 300 506 2.7E-66 T 28-03-2018 AM393_RS09275 b5eeaf07a3fed451a0ed54f9913d695e 535 Gene3D G3DSA:3.90.76.10 38 203 3.4E-39 T 28-03-2018 AM393_RS09275 b5eeaf07a3fed451a0ed54f9913d695e 535 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 73 453 2.7E-109 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain AM393_RS28140 3c3229b6f39b2cb8761f52a48747eabc 159 Pfam PF01464 Transglycosylase SLT domain 21 141 6.8E-20 T 28-03-2018 IPR008258 Transglycosylase SLT domain 1 AM393_RS28140 3c3229b6f39b2cb8761f52a48747eabc 159 SUPERFAMILY SSF53955 15 152 7.7E-26 T 28-03-2018 IPR023346 Lysozyme-like domain AM393_RS28140 3c3229b6f39b2cb8761f52a48747eabc 159 Gene3D G3DSA:1.10.530.10 14 157 4.1E-16 T 28-03-2018 AM393_RS05400 26dc1821b7f2f006cb589a7a45576a11 183 SUPERFAMILY SSF54523 36 156 2.2E-6 T 28-03-2018 AM393_RS05400 26dc1821b7f2f006cb589a7a45576a11 183 Pfam PF07963 Prokaryotic N-terminal methylation motif 29 54 9.4E-6 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site AM393_RS15420 81337a87893b4e10930db99728a6b46e 84 SUPERFAMILY SSF101744 1 83 1.2E-28 T 28-03-2018 IPR023534 Rof/RNase P-like Reactome: R-HSA-6784531 AM393_RS15420 81337a87893b4e10930db99728a6b46e 84 Gene3D G3DSA:2.30.30.400 8 81 4.7E-25 T 28-03-2018 AM393_RS15420 81337a87893b4e10930db99728a6b46e 84 Pfam PF07073 Modulator of Rho-dependent transcription termination (ROF) 7 81 1.3E-26 T 28-03-2018 IPR009778 Modulator of Rho-dependent transcription termination AM393_RS13955 d9dd9ff11a2ce97e5cbd4f86b9f1d508 338 Pfam PF02615 Malate/L-lactate dehydrogenase 8 331 2.8E-101 T 28-03-2018 IPR003767 Malate/L-lactate dehydrogenase-like GO:0008152|GO:0016491|GO:0055114 AM393_RS13955 d9dd9ff11a2ce97e5cbd4f86b9f1d508 338 Gene3D G3DSA:1.10.1530.10 296 325 0.068 T 28-03-2018 AM393_RS13955 d9dd9ff11a2ce97e5cbd4f86b9f1d508 338 SUPERFAMILY SSF89733 5 335 9.42E-101 T 28-03-2018 IPR003767 Malate/L-lactate dehydrogenase-like GO:0008152|GO:0016491|GO:0055114 AM393_RS13955 d9dd9ff11a2ce97e5cbd4f86b9f1d508 338 Gene3D G3DSA:3.30.1370.60 80 295 1.8E-80 T 28-03-2018 AM393_RS13955 d9dd9ff11a2ce97e5cbd4f86b9f1d508 338 Gene3D G3DSA:1.10.1530.10 4 79 7.5E-23 T 28-03-2018 AM393_RS04685 a10071fa234eb260c8944f31b2715d90 113 ProDom PD075772 YGBA ECS3588 CYTOPLASMIC UVRA STM2860 AMIDOPHOSPHORIBOSYLTRANSFERASE VVA0912 SO0324 VPA0976 CPE0229 2 94 1.0E-40 T 28-03-2018 IPR020483 Uncharacterised protein family YgbA AM393_RS04685 a10071fa234eb260c8944f31b2715d90 113 Pfam PF11756 Nitrous oxide-stimulated promoter 3 104 5.5E-40 T 28-03-2018 IPR020483 Uncharacterised protein family YgbA AM393_RS19405 cdd3270703c4aa6ce38529e375806052 410 Gene3D G3DSA:1.20.1250.20 9 207 8.7E-27 T 28-03-2018 AM393_RS19405 cdd3270703c4aa6ce38529e375806052 410 ProSitePatterns PS00216 Sugar transport proteins signature 1. 72 88 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM393_RS19405 cdd3270703c4aa6ce38529e375806052 410 SUPERFAMILY SSF103473 21 399 2.75E-45 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS19405 cdd3270703c4aa6ce38529e375806052 410 Pfam PF07690 Major Facilitator Superfamily 27 362 8.1E-27 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS19405 cdd3270703c4aa6ce38529e375806052 410 Gene3D G3DSA:1.20.1250.20 209 409 1.3E-8 T 28-03-2018 AM393_RS09930 4c560a740328f33f4632500404055c7b 96 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 75 1.0E-17 T 28-03-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain AM393_RS09930 4c560a740328f33f4632500404055c7b 96 Gene3D G3DSA:3.30.70.100 1 96 4.3E-23 T 28-03-2018 AM393_RS09930 4c560a740328f33f4632500404055c7b 96 SUPERFAMILY SSF54909 1 94 5.37E-30 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel AM393_RS17700 c73dc9db91c127127ce22ab333a073eb 347 SUPERFAMILY SSF53697 7 332 1.28E-46 T 28-03-2018 AM393_RS17700 c73dc9db91c127127ce22ab333a073eb 347 Gene3D G3DSA:3.40.50.10490 1 196 6.0E-32 T 28-03-2018 AM393_RS17700 c73dc9db91c127127ce22ab333a073eb 347 Gene3D G3DSA:3.40.50.10490 197 334 1.8E-11 T 28-03-2018 AM393_RS17700 c73dc9db91c127127ce22ab333a073eb 347 Pfam PF01380 SIS domain 32 153 3.5E-12 T 28-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AM393_RS26615 bb5488410c5b404666248c331430aad2 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 306 6.6E-39 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS26615 bb5488410c5b404666248c331430aad2 306 SUPERFAMILY SSF161098 89 291 9.81E-22 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS26615 bb5488410c5b404666248c331430aad2 306 Gene3D G3DSA:1.10.3720.10 2 294 7.9E-42 T 28-03-2018 AM393_RS25120 a108c9c32480b9a5f21908db81a307ca 172 Gene3D G3DSA:3.40.630.30 1 169 1.2E-34 T 28-03-2018 AM393_RS25120 a108c9c32480b9a5f21908db81a307ca 172 Pfam PF13420 Acetyltransferase (GNAT) domain 3 154 2.7E-18 T 28-03-2018 AM393_RS25120 a108c9c32480b9a5f21908db81a307ca 172 SUPERFAMILY SSF55729 3 164 6.69E-35 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM393_RS24700 b33094d256ecc3ce0a2cfad54e9eccf6 148 Pfam PF04239 Protein of unknown function (DUF421) 85 148 3.7E-15 T 28-03-2018 IPR007353 Protein of unknown function DUF421 AM393_RS24700 b33094d256ecc3ce0a2cfad54e9eccf6 148 Gene3D G3DSA:3.30.240.20 78 148 1.3E-17 T 28-03-2018 IPR023090 Uncharacterised domain UPF0702, alpha/beta domain AM393_RS05755 0702332443167bc4515d6a90749d3635 517 SUPERFAMILY SSF103473 269 499 1.48E-30 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS05755 0702332443167bc4515d6a90749d3635 517 SUPERFAMILY SSF103473 12 214 1.48E-30 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS05755 0702332443167bc4515d6a90749d3635 517 ProSitePatterns PS01022 PTR2 family proton/oligopeptide symporters signature 1. 79 103 - T 28-03-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 AM393_RS05755 0702332443167bc4515d6a90749d3635 517 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 155 167 - T 28-03-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 AM393_RS05755 0702332443167bc4515d6a90749d3635 517 Pfam PF00854 POT family 91 465 4.7E-63 T 28-03-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-427975 AM393_RS05755 0702332443167bc4515d6a90749d3635 517 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 11 502 6.4E-109 T 28-03-2018 IPR005279 Dipeptide/tripeptide permease GO:0015197|GO:0015833|GO:0016020 AM393_RS05755 0702332443167bc4515d6a90749d3635 517 Gene3D G3DSA:1.20.1250.20 287 516 3.9E-17 T 28-03-2018 AM393_RS05755 0702332443167bc4515d6a90749d3635 517 Gene3D G3DSA:1.20.1250.20 10 215 7.0E-24 T 28-03-2018 AM393_RS27310 c566d3441bab046688851471264aca52 388 Gene3D G3DSA:3.40.50.300 106 376 4.2E-36 T 28-03-2018 AM393_RS27310 c566d3441bab046688851471264aca52 388 Gene3D G3DSA:1.10.1660.10 36 102 6.2E-6 T 28-03-2018 AM393_RS27310 c566d3441bab046688851471264aca52 388 SUPERFAMILY SSF52540 106 374 2.1E-37 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS27310 c566d3441bab046688851471264aca52 388 Pfam PF13614 AAA domain 108 285 7.8E-29 T 28-03-2018 IPR025669 AAA domain AM393_RS19820 998548cbc16a9ccd3bd1929aab341d39 299 ProDom PD022789 MEMBRANE SURFACE PRECURSOR SIGNAL PROTEIN YBJE TRANSMEMBRANE INNER PREDICTED STY0934 135 296 7.0E-74 T 28-03-2018 IPR005642 Lysine exporter LysO AM393_RS19820 998548cbc16a9ccd3bd1929aab341d39 299 Pfam PF03956 Lysine exporter LysO 113 297 1.1E-58 T 28-03-2018 IPR005642 Lysine exporter LysO AM393_RS17925 f06f59bdc7d8f3b6d605e61ab6d2318e 355 Pfam PF02653 Branched-chain amino acid transport system / permease component 43 320 1.0E-43 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AM393_RS17925 f06f59bdc7d8f3b6d605e61ab6d2318e 355 Gene3D G3DSA:1.10.3470.10 23 325 1.6E-29 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AM393_RS09885 e72fdc267d38748189994b8fb0bd2432 519 Gene3D G3DSA:3.30.1360.60 441 516 1.2E-24 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AM393_RS09885 e72fdc267d38748189994b8fb0bd2432 519 Pfam PF00367 phosphotransferase system, EIIB 446 478 8.9E-13 T 28-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AM393_RS09885 e72fdc267d38748189994b8fb0bd2432 519 Pfam PF02378 Phosphotransferase system, EIIC 17 350 7.8E-58 T 28-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AM393_RS09885 e72fdc267d38748189994b8fb0bd2432 519 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 411 502 4.6E-21 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AM393_RS09885 e72fdc267d38748189994b8fb0bd2432 519 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 456 473 - T 28-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AM393_RS09885 e72fdc267d38748189994b8fb0bd2432 519 SUPERFAMILY SSF55604 444 515 4.18E-20 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AM393_RS24505 ef86435c40f3aa901f273b72edf94107 396 SUPERFAMILY SSF52833 249 390 7.26E-31 T 28-03-2018 IPR012336 Thioredoxin-like fold AM393_RS24505 ef86435c40f3aa901f273b72edf94107 396 Gene3D G3DSA:3.40.30.10 217 396 5.7E-24 T 28-03-2018 AM393_RS24505 ef86435c40f3aa901f273b72edf94107 396 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 6 200 3.8E-12 T 28-03-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 AM393_RS24505 ef86435c40f3aa901f273b72edf94107 396 Pfam PF00578 AhpC/TSA family 272 372 5.7E-11 T 28-03-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AM393_RS09660 3b2bae73deda9953d78f988f01f0bbe3 375 SUPERFAMILY SSF53756 5 373 7.85E-68 T 28-03-2018 AM393_RS09660 3b2bae73deda9953d78f988f01f0bbe3 375 Pfam PF13439 Glycosyltransferase Family 4 17 183 1.2E-17 T 28-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 AM393_RS09660 3b2bae73deda9953d78f988f01f0bbe3 375 Gene3D G3DSA:3.40.50.2000 4 190 2.3E-5 T 28-03-2018 AM393_RS09660 3b2bae73deda9953d78f988f01f0bbe3 375 Gene3D G3DSA:3.40.50.2000 191 353 4.8E-31 T 28-03-2018 AM393_RS09660 3b2bae73deda9953d78f988f01f0bbe3 375 Pfam PF00534 Glycosyl transferases group 1 196 334 1.8E-24 T 28-03-2018 IPR001296 Glycosyl transferase, family 1 AM393_RS07325 a8347be958a82ce834c999072e6f598c 470 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 6 95 2.0E-15 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AM393_RS07325 a8347be958a82ce834c999072e6f598c 470 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 118 453 2.2E-112 T 28-03-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 AM393_RS07325 a8347be958a82ce834c999072e6f598c 470 Gene3D G3DSA:3.40.50.2300 3 99 2.7E-37 T 28-03-2018 AM393_RS07325 a8347be958a82ce834c999072e6f598c 470 Pfam PF02378 Phosphotransferase system, EIIC 133 398 4.8E-12 T 28-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AM393_RS07325 a8347be958a82ce834c999072e6f598c 470 SUPERFAMILY SSF52794 3 102 1.19E-35 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AM393_RS07325 a8347be958a82ce834c999072e6f598c 470 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 5 87 2.5E-30 T 28-03-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202|KEGG: 00230+2.7.1.20|MetaCyc: PWY-6619 AM393_RS06755 b1ba422a22f6678cf9bc536c2e0df1c6 219 SMART SM00448 1 112 8.3E-37 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM393_RS06755 b1ba422a22f6678cf9bc536c2e0df1c6 219 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 216 1.8E-22 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM393_RS06755 b1ba422a22f6678cf9bc536c2e0df1c6 219 Pfam PF00072 Response regulator receiver domain 3 112 3.7E-21 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM393_RS06755 b1ba422a22f6678cf9bc536c2e0df1c6 219 SMART SM00862 145 216 2.5E-24 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM393_RS06755 b1ba422a22f6678cf9bc536c2e0df1c6 219 Gene3D G3DSA:1.10.10.10 123 219 2.1E-26 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS06755 b1ba422a22f6678cf9bc536c2e0df1c6 219 Gene3D G3DSA:3.40.50.2300 1 122 9.3E-31 T 28-03-2018 AM393_RS06755 b1ba422a22f6678cf9bc536c2e0df1c6 219 SUPERFAMILY SSF52172 1 173 2.57E-34 T 28-03-2018 IPR011006 CheY-like superfamily AM393_RS07830 54f0ecb6b4538d3abca69f42826f4b8b 655 Pfam PF04632 Fusaric acid resistance protein family 11 652 6.8E-153 T 28-03-2018 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 AM393_RS07830 54f0ecb6b4538d3abca69f42826f4b8b 655 Hamap MF_01545 p-hydroxybenzoic acid efflux pump subunit AaeB [aaeB]. 3 653 54.271 T 28-03-2018 IPR023706 Para-hydroxybenzoic acid efflux pump, subunit AaeB GO:0005886|GO:0006810 AM393_RS19840 16daf529da8f1e0bc0a884e87353d17d 646 Pfam PF00005 ABC transporter 24 172 1.7E-31 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS19840 16daf529da8f1e0bc0a884e87353d17d 646 SMART SM00382 33 220 5.0E-15 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS19840 16daf529da8f1e0bc0a884e87353d17d 646 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS19840 16daf529da8f1e0bc0a884e87353d17d 646 Gene3D G3DSA:3.40.50.300 1 230 3.9E-67 T 28-03-2018 AM393_RS19840 16daf529da8f1e0bc0a884e87353d17d 646 SUPERFAMILY SSF52540 4 226 2.72E-68 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS19840 16daf529da8f1e0bc0a884e87353d17d 646 Pfam PF12704 MacB-like periplasmic core domain 270 487 1.8E-38 T 28-03-2018 IPR025857 MacB-like periplasmic core domain AM393_RS19840 16daf529da8f1e0bc0a884e87353d17d 646 Pfam PF02687 FtsX-like permease family 551 639 9.7E-12 T 28-03-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AM393_RS12060 e2ce90bef0b9063694819ba9ce3d807a 122 Gene3D G3DSA:1.10.3830.10 7 119 4.2E-42 T 28-03-2018 IPR000829 DAGK family GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 AM393_RS12060 e2ce90bef0b9063694819ba9ce3d807a 122 Pfam PF01219 Prokaryotic diacylglycerol kinase 16 116 1.3E-34 T 28-03-2018 IPR000829 DAGK family GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 AM393_RS12060 e2ce90bef0b9063694819ba9ce3d807a 122 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 70 81 - T 28-03-2018 IPR000829 DAGK family GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 AM393_RS17435 875ff2f2de49229bdcc0c33253b55086 334 Gene3D G3DSA:3.40.50.2300 62 171 1.4E-23 T 28-03-2018 AM393_RS17435 875ff2f2de49229bdcc0c33253b55086 334 SUPERFAMILY SSF47413 6 63 2.94E-17 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM393_RS17435 875ff2f2de49229bdcc0c33253b55086 334 TIGRFAM TIGR02417 fruct_sucro_rep: D-fructose-responsive transcription factor 7 333 1.2E-149 T 28-03-2018 IPR012781 D-fructose-responsive transcription factor GO:0003677|GO:0006355|GO:0009750 AM393_RS17435 875ff2f2de49229bdcc0c33253b55086 334 Pfam PF00356 Bacterial regulatory proteins, lacI family 7 55 3.4E-20 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM393_RS17435 875ff2f2de49229bdcc0c33253b55086 334 SUPERFAMILY SSF53822 65 329 4.91E-47 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AM393_RS17435 875ff2f2de49229bdcc0c33253b55086 334 SMART SM00354 5 78 1.0E-38 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM393_RS17435 875ff2f2de49229bdcc0c33253b55086 334 Gene3D G3DSA:3.40.50.2300 172 333 1.1E-24 T 28-03-2018 AM393_RS17435 875ff2f2de49229bdcc0c33253b55086 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 17 27 4.5E-5 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM393_RS17435 875ff2f2de49229bdcc0c33253b55086 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 7 17 4.5E-5 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM393_RS17435 875ff2f2de49229bdcc0c33253b55086 334 Pfam PF13377 Periplasmic binding protein-like domain 182 332 6.2E-12 T 28-03-2018 AM393_RS17435 875ff2f2de49229bdcc0c33253b55086 334 Gene3D G3DSA:1.10.260.40 6 61 5.5E-23 T 28-03-2018 AM393_RS17435 875ff2f2de49229bdcc0c33253b55086 334 ProSitePatterns PS00356 LacI-type HTH domain signature. 8 26 - T 28-03-2018 AM393_RS07880 3f359f149db61b3ae9c75914ac780fd4 347 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 9 339 3.0E-170 T 28-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 AM393_RS07880 3f359f149db61b3ae9c75914ac780fd4 347 Gene3D G3DSA:3.90.640.10 199 255 4.0E-27 T 28-03-2018 AM393_RS07880 3f359f149db61b3ae9c75914ac780fd4 347 SUPERFAMILY SSF53067 9 152 6.66E-38 T 28-03-2018 AM393_RS07880 3f359f149db61b3ae9c75914ac780fd4 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 72 95 9.7E-66 T 28-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 AM393_RS07880 3f359f149db61b3ae9c75914ac780fd4 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 191 211 9.7E-66 T 28-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 AM393_RS07880 3f359f149db61b3ae9c75914ac780fd4 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 52 70 9.7E-66 T 28-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 AM393_RS07880 3f359f149db61b3ae9c75914ac780fd4 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 136 155 9.7E-66 T 28-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 AM393_RS07880 3f359f149db61b3ae9c75914ac780fd4 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 304 330 9.7E-66 T 28-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 AM393_RS07880 3f359f149db61b3ae9c75914ac780fd4 347 Pfam PF06723 MreB/Mbl protein 11 338 3.5E-150 T 28-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 AM393_RS07880 3f359f149db61b3ae9c75914ac780fd4 347 Gene3D G3DSA:3.30.420.40 164 198 3.4E-4 T 28-03-2018 AM393_RS07880 3f359f149db61b3ae9c75914ac780fd4 347 SUPERFAMILY SSF53067 153 340 1.81E-49 T 28-03-2018 AM393_RS07880 3f359f149db61b3ae9c75914ac780fd4 347 Gene3D G3DSA:3.30.420.40 8 163 3.5E-42 T 28-03-2018 AM393_RS07880 3f359f149db61b3ae9c75914ac780fd4 347 Gene3D G3DSA:3.30.420.40 256 321 1.8E-8 T 28-03-2018 AM393_RS10550 fbd2cad1625aa6cd0d5ea94822d18ccc 146 PRINTS PR00369 Flavodoxin signature 51 62 8.0E-5 T 28-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AM393_RS10550 fbd2cad1625aa6cd0d5ea94822d18ccc 146 PRINTS PR00369 Flavodoxin signature 5 18 8.0E-5 T 28-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AM393_RS10550 fbd2cad1625aa6cd0d5ea94822d18ccc 146 PRINTS PR00369 Flavodoxin signature 82 92 8.0E-5 T 28-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AM393_RS10550 fbd2cad1625aa6cd0d5ea94822d18ccc 146 Gene3D G3DSA:3.40.50.360 1 146 3.7E-29 T 28-03-2018 IPR029039 Flavoprotein-like domain AM393_RS10550 fbd2cad1625aa6cd0d5ea94822d18ccc 146 Pfam PF00258 Flavodoxin 7 138 2.5E-23 T 28-03-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 AM393_RS10550 fbd2cad1625aa6cd0d5ea94822d18ccc 146 SUPERFAMILY SSF52218 1 146 2.39E-38 T 28-03-2018 IPR029039 Flavoprotein-like domain AM393_RS22425 2436b0cc703aa777ca5f2c262d3d55a0 251 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 187 2.2E-5 T 28-03-2018 AM393_RS22425 2436b0cc703aa777ca5f2c262d3d55a0 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.4E-28 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS22425 2436b0cc703aa777ca5f2c262d3d55a0 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 1.4E-28 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS22425 2436b0cc703aa777ca5f2c262d3d55a0 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 1.4E-28 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS22425 2436b0cc703aa777ca5f2c262d3d55a0 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 213 233 1.4E-28 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS22425 2436b0cc703aa777ca5f2c262d3d55a0 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 1.4E-28 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS22425 2436b0cc703aa777ca5f2c262d3d55a0 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 1.4E-28 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS22425 2436b0cc703aa777ca5f2c262d3d55a0 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 3.7E-7 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS22425 2436b0cc703aa777ca5f2c262d3d55a0 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 3.7E-7 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS22425 2436b0cc703aa777ca5f2c262d3d55a0 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 3.7E-7 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS22425 2436b0cc703aa777ca5f2c262d3d55a0 251 SUPERFAMILY SSF51735 3 251 1.1E-69 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS22425 2436b0cc703aa777ca5f2c262d3d55a0 251 Gene3D G3DSA:3.40.50.720 1 38 6.1E-7 T 28-03-2018 AM393_RS22425 2436b0cc703aa777ca5f2c262d3d55a0 251 Gene3D G3DSA:3.40.50.720 39 251 3.9E-57 T 28-03-2018 AM393_RS22425 2436b0cc703aa777ca5f2c262d3d55a0 251 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 9 250 2.4E-50 T 28-03-2018 AM393_RS25180 29f5ae2b7d1eb100df1185255a21710b 268 Gene3D G3DSA:1.10.3720.10 7 263 4.0E-35 T 28-03-2018 AM393_RS25180 29f5ae2b7d1eb100df1185255a21710b 268 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 247 2.5E-10 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS25180 29f5ae2b7d1eb100df1185255a21710b 268 SUPERFAMILY SSF161098 5 260 1.31E-47 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS02850 e8317983b063b5ed584f95a57982374e 270 Gene3D G3DSA:3.30.70.580 9 113 1.7E-35 T 28-03-2018 AM393_RS02850 e8317983b063b5ed584f95a57982374e 270 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 10 252 35.775 T 28-03-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM393_RS02850 e8317983b063b5ed584f95a57982374e 270 Pfam PF01416 tRNA pseudouridine synthase 151 253 1.0E-28 T 28-03-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM393_RS02850 e8317983b063b5ed584f95a57982374e 270 Pfam PF01416 tRNA pseudouridine synthase 17 111 3.1E-9 T 28-03-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM393_RS02850 e8317983b063b5ed584f95a57982374e 270 PIRSF PIRSF001430 10 259 4.9E-78 T 28-03-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM393_RS02850 e8317983b063b5ed584f95a57982374e 270 Gene3D G3DSA:3.30.70.660 114 251 7.6E-39 T 28-03-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM393_RS02850 e8317983b063b5ed584f95a57982374e 270 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 11 247 4.6E-80 T 28-03-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM393_RS02850 e8317983b063b5ed584f95a57982374e 270 SUPERFAMILY SSF55120 9 264 1.73E-93 T 28-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM393_RS03475 2c10537711368c18eef44669f46f50ae 295 SUPERFAMILY SSF53850 86 291 2.27E-40 T 28-03-2018 AM393_RS03475 2c10537711368c18eef44669f46f50ae 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 64 7.2E-20 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS03475 2c10537711368c18eef44669f46f50ae 295 Gene3D G3DSA:3.40.190.10 188 268 1.2E-21 T 28-03-2018 AM393_RS03475 2c10537711368c18eef44669f46f50ae 295 Gene3D G3DSA:1.10.10.10 1 84 9.2E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS03475 2c10537711368c18eef44669f46f50ae 295 Gene3D G3DSA:3.40.190.10 85 187 1.2E-20 T 28-03-2018 AM393_RS03475 2c10537711368c18eef44669f46f50ae 295 SUPERFAMILY SSF46785 4 114 1.54E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS03475 2c10537711368c18eef44669f46f50ae 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 2.4E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS03475 2c10537711368c18eef44669f46f50ae 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 2.4E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS03475 2c10537711368c18eef44669f46f50ae 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 2.4E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS03475 2c10537711368c18eef44669f46f50ae 295 Pfam PF03466 LysR substrate binding domain 89 291 3.6E-44 T 28-03-2018 IPR005119 LysR, substrate-binding AM393_RS27635 ba300d5d3499fd4ec7d923cf74692a0c 160 SUPERFAMILY SSF55729 14 151 6.16E-12 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM393_RS27635 ba300d5d3499fd4ec7d923cf74692a0c 160 Pfam PF13673 Acetyltransferase (GNAT) domain 74 149 1.1E-8 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AM393_RS27635 ba300d5d3499fd4ec7d923cf74692a0c 160 Gene3D G3DSA:3.40.630.30 25 156 6.5E-15 T 28-03-2018 AM393_RS20180 fbe8a44eef47af89c6b5bc17f857dad4 545 Gene3D G3DSA:1.20.120.570 400 535 2.8E-5 T 28-03-2018 AM393_RS20180 fbe8a44eef47af89c6b5bc17f857dad4 545 Pfam PF02470 MlaD protein 157 222 2.3E-8 T 28-03-2018 IPR003399 Mce/MlaD AM393_RS20180 fbe8a44eef47af89c6b5bc17f857dad4 545 Pfam PF02470 MlaD protein 285 389 2.7E-15 T 28-03-2018 IPR003399 Mce/MlaD AM393_RS20180 fbe8a44eef47af89c6b5bc17f857dad4 545 Pfam PF02470 MlaD protein 42 133 8.9E-10 T 28-03-2018 IPR003399 Mce/MlaD AM393_RS00745 10e5a0630c8d5bbff102049c11324df5 189 SUPERFAMILY SSF54593 2 186 3.77E-67 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM393_RS00745 10e5a0630c8d5bbff102049c11324df5 189 Gene3D G3DSA:3.10.180.10 7 186 9.5E-77 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM393_RS00745 10e5a0630c8d5bbff102049c11324df5 189 Pfam PF06185 YecM protein 10 185 4.3E-70 T 28-03-2018 IPR010393 Protein of unknown function DUF991 AM393_RS22250 e0878723209b930b213ce63711cc89ac 257 Pfam PF11041 Protein of unknown function (DUF2612) 4 161 2.9E-45 T 28-03-2018 IPR021283 Protein of unknown function DUF2612 AM393_RS10830 dbb3d1d7bdff90f86fb2768119f2030d 197 Gene3D G3DSA:3.40.50.300 9 167 5.4E-12 T 28-03-2018 AM393_RS10830 dbb3d1d7bdff90f86fb2768119f2030d 197 SUPERFAMILY SSF52540 10 168 8.63E-13 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS17445 9b97d84d0c1be9af2b2da2212f59b622 456 SUPERFAMILY SSF55604 7 80 2.75E-19 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AM393_RS17445 9b97d84d0c1be9af2b2da2212f59b622 456 TIGRFAM TIGR00852 pts-Glc: PTS system, maltose and glucose-specific subfamily, IIC component 153 437 4.1E-94 T 28-03-2018 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component GO:0008982|GO:0009401|GO:0016021 AM393_RS17445 9b97d84d0c1be9af2b2da2212f59b622 456 Pfam PF00367 phosphotransferase system, EIIB 9 41 6.4E-13 T 28-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AM393_RS17445 9b97d84d0c1be9af2b2da2212f59b622 456 TIGRFAM TIGR01996 PTS-II-BC-sucr: PTS system, sucrose-specific IIBC component 3 448 1.1E-195 T 28-03-2018 IPR010973 Phosphotransferase system, sucrose-specific IIBC component GO:0008982|GO:0009401|GO:0016021 AM393_RS17445 9b97d84d0c1be9af2b2da2212f59b622 456 Gene3D G3DSA:3.30.1360.60 4 80 2.1E-24 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AM393_RS17445 9b97d84d0c1be9af2b2da2212f59b622 456 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 19 36 - T 28-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AM393_RS17445 9b97d84d0c1be9af2b2da2212f59b622 456 Pfam PF02378 Phosphotransferase system, EIIC 110 395 2.1E-50 T 28-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AM393_RS17445 9b97d84d0c1be9af2b2da2212f59b622 456 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 28 111 6.9E-23 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AM393_RS07235 e65e066acac5f745c40a8ea462aff707 98 Pfam PF13997 YqjK-like protein 14 86 5.9E-30 T 28-03-2018 IPR025612 YqjK-like protein AM393_RS07225 4df9d70abbb3803876c3d7868c56d763 101 Gene3D G3DSA:1.20.5.1230 2 86 8.7E-5 T 28-03-2018 AM393_RS07225 4df9d70abbb3803876c3d7868c56d763 101 Pfam PF05957 Bacterial protein of unknown function (DUF883) 8 101 1.4E-32 T 28-03-2018 IPR010279 Protein of unknown function DUF883, ElaB AM393_RS05115 df635d9a8b5682ace03e3dd584229925 365 SMART SM00925 125 257 7.5E-69 T 28-03-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 AM393_RS05115 df635d9a8b5682ace03e3dd584229925 365 SUPERFAMILY SSF50685 25 354 2.48E-115 T 28-03-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain AM393_RS05115 df635d9a8b5682ace03e3dd584229925 365 Pfam PF06725 3D domain 277 354 5.0E-25 T 28-03-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 AM393_RS05115 df635d9a8b5682ace03e3dd584229925 365 Gene3D G3DSA:2.40.240.50 58 259 4.3E-63 T 28-03-2018 AM393_RS05115 df635d9a8b5682ace03e3dd584229925 365 Pfam PF03562 MltA specific insert domain 90 257 1.1E-40 T 28-03-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 AM393_RS05115 df635d9a8b5682ace03e3dd584229925 365 PIRSF PIRSF019422 145 365 2.0E-73 T 28-03-2018 IPR026044 Membrane-bound lytic murein transglycosylase A AM393_RS05115 df635d9a8b5682ace03e3dd584229925 365 PIRSF PIRSF019422 1 147 1.6E-19 T 28-03-2018 IPR026044 Membrane-bound lytic murein transglycosylase A AM393_RS24070 222dd763a49d5adcf73c95f36738cfdb 420 Gene3D G3DSA:3.90.350.10 108 345 6.2E-15 T 28-03-2018 IPR014736 Transposase, Tn5-like, core AM393_RS24070 222dd763a49d5adcf73c95f36738cfdb 420 SUPERFAMILY SSF53098 86 367 2.81E-7 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM393_RS24070 222dd763a49d5adcf73c95f36738cfdb 420 Pfam PF13701 Transposase DDE domain group 1 4 418 1.7E-54 T 28-03-2018 IPR025668 Transposase DDE domain AM393_RS28940 222dd763a49d5adcf73c95f36738cfdb 420 Gene3D G3DSA:3.90.350.10 108 345 6.2E-15 T 28-03-2018 IPR014736 Transposase, Tn5-like, core AM393_RS28940 222dd763a49d5adcf73c95f36738cfdb 420 SUPERFAMILY SSF53098 86 367 2.81E-7 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM393_RS28940 222dd763a49d5adcf73c95f36738cfdb 420 Pfam PF13701 Transposase DDE domain group 1 4 418 1.7E-54 T 28-03-2018 IPR025668 Transposase DDE domain AM393_RS02830 584499e637363b6012be63e125613986 228 Pfam PF05036 Sporulation related domain 149 222 4.5E-10 T 28-03-2018 IPR007730 Sporulation-related domain GO:0042834 AM393_RS02830 584499e637363b6012be63e125613986 228 Hamap MF_02022 Cell division protein DedD [dedD]. 10 227 23.879 T 28-03-2018 IPR032898 Cell division protein DedD GO:0030428|GO:0032506 AM393_RS02830 584499e637363b6012be63e125613986 228 SUPERFAMILY SSF110997 148 223 2.75E-12 T 28-03-2018 IPR007730 Sporulation-related domain GO:0042834 AM393_RS02830 584499e637363b6012be63e125613986 228 Gene3D G3DSA:3.30.70.1070 146 224 1.0E-7 T 28-03-2018 IPR007730 Sporulation-related domain GO:0042834 AM393_RS20385 f14e15e01abc31d0df929c8b7f226393 463 Pfam PF00324 Amino acid permease 27 429 7.1E-41 T 28-03-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 AM393_RS20385 f14e15e01abc31d0df929c8b7f226393 463 PIRSF PIRSF006060 7 461 1.9E-76 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AM393_RS13645 305221d4c7f1685ae36a14c8077781ff 420 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 115 320 2.2E-59 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AM393_RS13645 305221d4c7f1685ae36a14c8077781ff 420 SUPERFAMILY SSF111369 125 324 7.32E-12 T 28-03-2018 AM393_RS13645 305221d4c7f1685ae36a14c8077781ff 420 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 205 397 5.4E-35 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AM393_RS13645 305221d4c7f1685ae36a14c8077781ff 420 Gene3D G3DSA:2.40.50.100 128 246 4.3E-9 T 28-03-2018 AM393_RS21540 0cc6d39735132d0ff75eb29952bee03f 132 Pfam PF03061 Thioesterase superfamily 26 97 8.1E-20 T 28-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AM393_RS21540 0cc6d39735132d0ff75eb29952bee03f 132 Gene3D G3DSA:3.10.129.10 1 131 3.8E-35 T 28-03-2018 AM393_RS21540 0cc6d39735132d0ff75eb29952bee03f 132 SUPERFAMILY SSF54637 8 131 3.05E-40 T 28-03-2018 IPR029069 HotDog domain AM393_RS04905 907b6b0656af4f62f0e94230adf55e25 263 Gene3D G3DSA:1.10.287.1080 3 121 3.8E-42 T 28-03-2018 AM393_RS04905 907b6b0656af4f62f0e94230adf55e25 263 SUPERFAMILY SSF101386 2 105 5.72E-26 T 28-03-2018 AM393_RS04905 907b6b0656af4f62f0e94230adf55e25 263 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 167 227 3.0E-7 T 28-03-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core AM393_RS04905 907b6b0656af4f62f0e94230adf55e25 263 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 27 100 1.4E-27 T 28-03-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core AM393_RS04905 907b6b0656af4f62f0e94230adf55e25 263 Gene3D G3DSA:1.10.287.1080 122 222 3.2E-25 T 28-03-2018 AM393_RS04905 907b6b0656af4f62f0e94230adf55e25 263 TIGRFAM TIGR00444 mazG: MazG family protein 10 257 2.6E-120 T 28-03-2018 IPR011551 NTP pyrophosphohydrolase MazG AM393_RS04905 907b6b0656af4f62f0e94230adf55e25 263 SUPERFAMILY SSF101386 135 236 1.12E-22 T 28-03-2018 AM393_RS11875 85cf013939dc9337cc698b72032ba310 533 Gene3D G3DSA:3.20.20.360 79 414 3.5E-109 T 28-03-2018 AM393_RS11875 85cf013939dc9337cc698b72032ba310 533 SUPERFAMILY SSF51645 11 532 9.02E-190 T 28-03-2018 IPR011076 Malate synthase-like GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 AM393_RS11875 85cf013939dc9337cc698b72032ba310 533 Pfam PF01274 Malate synthase 13 532 1.3E-210 T 28-03-2018 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 AM393_RS11875 85cf013939dc9337cc698b72032ba310 533 ProSitePatterns PS00510 Malate synthase signature. 266 281 - T 28-03-2018 IPR019830 Malate synthase, conserved site GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 AM393_RS11875 85cf013939dc9337cc698b72032ba310 533 TIGRFAM TIGR01344 malate_syn_A: malate synthase A 24 532 8.3E-251 T 28-03-2018 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 AM393_RS11875 85cf013939dc9337cc698b72032ba310 533 PIRSF PIRSF001363 2 533 1.5E-250 T 28-03-2018 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 AM393_RS11875 85cf013939dc9337cc698b72032ba310 533 Gene3D G3DSA:1.20.1220.12 415 532 1.4E-47 T 28-03-2018 AM393_RS16870 06163bc856489d174a975cb332dba1b6 358 SMART SM00450 1 131 1.2E-9 T 28-03-2018 IPR001763 Rhodanese-like domain AM393_RS16870 06163bc856489d174a975cb332dba1b6 358 Gene3D G3DSA:3.40.250.10 3 139 3.0E-17 T 28-03-2018 IPR001763 Rhodanese-like domain AM393_RS16870 06163bc856489d174a975cb332dba1b6 358 TIGRFAM TIGR03167 tRNA_sel_U_synt: tRNA 2-selenouridine synthase 14 342 6.1E-98 T 28-03-2018 IPR017582 tRNA 2-selenouridine synthase GO:0016785|GO:0043828|GO:0070329 AM393_RS16870 06163bc856489d174a975cb332dba1b6 358 Hamap MF_01622 tRNA 2-selenouridine synthase [selU]. 1 358 46.212 T 28-03-2018 IPR017582 tRNA 2-selenouridine synthase GO:0016785|GO:0043828|GO:0070329 AM393_RS16870 06163bc856489d174a975cb332dba1b6 358 SUPERFAMILY SSF52821 91 153 1.17E-19 T 28-03-2018 IPR001763 Rhodanese-like domain AM393_RS16870 06163bc856489d174a975cb332dba1b6 358 SUPERFAMILY SSF52821 6 63 1.17E-19 T 28-03-2018 IPR001763 Rhodanese-like domain AM393_RS04650 e7318eac57465cc9338622955215115c 104 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 6 98 3.1E-32 T 28-03-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 AM393_RS04650 e7318eac57465cc9338622955215115c 104 Gene3D G3DSA:1.20.58.80 1 99 1.4E-33 T 28-03-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 AM393_RS04650 e7318eac57465cc9338622955215115c 104 SUPERFAMILY SSF46973 1 98 9.02E-33 T 28-03-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 AM393_RS04650 e7318eac57465cc9338622955215115c 104 PIRSF PIRSF000699 1 103 3.6E-34 T 28-03-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 AM393_RS17420 34872dd6b2f973200ee6db813a5a1011 494 SMART SM00382 278 473 2.1E-6 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS17420 34872dd6b2f973200ee6db813a5a1011 494 SMART SM00382 30 218 3.2E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS17420 34872dd6b2f973200ee6db813a5a1011 494 SUPERFAMILY SSF52540 243 479 4.36E-50 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS17420 34872dd6b2f973200ee6db813a5a1011 494 ProSitePatterns PS00211 ABC transporters family signature. 397 411 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS17420 34872dd6b2f973200ee6db813a5a1011 494 Gene3D G3DSA:3.40.50.300 249 488 7.8E-40 T 28-03-2018 AM393_RS17420 34872dd6b2f973200ee6db813a5a1011 494 Gene3D G3DSA:3.40.50.300 3 240 6.6E-53 T 28-03-2018 AM393_RS17420 34872dd6b2f973200ee6db813a5a1011 494 Pfam PF00005 ABC transporter 270 424 2.9E-23 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS17420 34872dd6b2f973200ee6db813a5a1011 494 Pfam PF00005 ABC transporter 21 170 5.5E-33 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS17420 34872dd6b2f973200ee6db813a5a1011 494 SUPERFAMILY SSF52540 5 230 8.27E-60 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS13410 891f2c60c7be3eb774a63c1ef9061913 274 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 1 254 35.698 T 28-03-2018 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 AM393_RS13410 891f2c60c7be3eb774a63c1ef9061913 274 SUPERFAMILY SSF56300 1 257 2.73E-54 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like AM393_RS13410 891f2c60c7be3eb774a63c1ef9061913 274 Pfam PF00149 Calcineurin-like phosphoesterase 3 198 4.1E-18 T 28-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AM393_RS13410 891f2c60c7be3eb774a63c1ef9061913 274 Gene3D G3DSA:3.60.21.10 1 264 2.5E-34 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like AM393_RS05565 45bfdde8b98792c503e631e6c20d6a22 391 SUPERFAMILY SSF82171 185 382 1.27E-25 T 28-03-2018 AM393_RS05565 45bfdde8b98792c503e631e6c20d6a22 391 SUPERFAMILY SSF82171 16 133 1.27E-25 T 28-03-2018 AM393_RS05565 45bfdde8b98792c503e631e6c20d6a22 391 Gene3D G3DSA:2.130.10.10 1 386 8.0E-39 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 AM393_RS05565 45bfdde8b98792c503e631e6c20d6a22 391 Pfam PF14583 Oligogalacturonate lyase 1 384 1.7E-209 T 28-03-2018 IPR027946 Oligogalacturonate lyase domain GO:0045490|GO:0047487 KEGG: 00040+4.2.2.6 AM393_RS14315 be4a5821821d76c93e78ebde27b43734 451 PIRSF PIRSF004548 1 447 3.8E-160 T 28-03-2018 IPR010364 Uncharacterised protein family, inner membrane CreD AM393_RS14315 be4a5821821d76c93e78ebde27b43734 451 Pfam PF06123 Inner membrane protein CreD 5 426 5.0E-138 T 28-03-2018 IPR010364 Uncharacterised protein family, inner membrane CreD AM393_RS24975 e4a85d1ec592d1405e0178ae4e39b38f 274 Gene3D G3DSA:1.10.10.60 233 272 3.5E-12 T 28-03-2018 AM393_RS24975 e4a85d1ec592d1405e0178ae4e39b38f 274 SUPERFAMILY SSF46689 171 220 6.81E-5 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS24975 e4a85d1ec592d1405e0178ae4e39b38f 274 SUPERFAMILY SSF46689 222 271 1.48E-12 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS24975 e4a85d1ec592d1405e0178ae4e39b38f 274 Pfam PF12833 Helix-turn-helix domain 192 271 5.4E-22 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM393_RS24975 e4a85d1ec592d1405e0178ae4e39b38f 274 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 253 269 2.3E-6 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM393_RS24975 e4a85d1ec592d1405e0178ae4e39b38f 274 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 238 253 2.3E-6 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM393_RS24975 e4a85d1ec592d1405e0178ae4e39b38f 274 SMART SM00342 186 269 8.3E-25 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM393_RS24975 e4a85d1ec592d1405e0178ae4e39b38f 274 Pfam PF02311 AraC-like ligand binding domain 20 103 4.7E-13 T 28-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AM393_RS24975 e4a85d1ec592d1405e0178ae4e39b38f 274 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 221 265 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM393_RS24975 e4a85d1ec592d1405e0178ae4e39b38f 274 SUPERFAMILY SSF51215 19 156 1.24E-14 T 28-03-2018 AM393_RS24975 e4a85d1ec592d1405e0178ae4e39b38f 274 Gene3D G3DSA:2.60.120.10 10 232 6.9E-24 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AM393_RS28695 0e89b6b418b4592e6180ebf323498829 119 Pfam PF04024 PspC domain 8 65 5.2E-15 T 28-03-2018 IPR007168 Phage shock protein, PspC, N-terminal AM393_RS28695 0e89b6b418b4592e6180ebf323498829 119 TIGRFAM TIGR02978 phageshock_pspC: phage shock protein C 7 119 7.5E-40 T 28-03-2018 IPR014320 Phage shock protein, PspC AM393_RS13970 4bff45e71db35f2e2cbeaa3c4e9a2063 479 Pfam PF07969 Amidohydrolase family 45 459 9.3E-41 T 28-03-2018 IPR013108 Amidohydrolase 3 AM393_RS13970 4bff45e71db35f2e2cbeaa3c4e9a2063 479 Gene3D G3DSA:2.30.40.10 397 462 4.3E-7 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM393_RS13970 4bff45e71db35f2e2cbeaa3c4e9a2063 479 Gene3D G3DSA:2.30.40.10 2 68 1.5E-19 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM393_RS13970 4bff45e71db35f2e2cbeaa3c4e9a2063 479 SUPERFAMILY SSF51556 57 415 6.46E-84 T 28-03-2018 IPR032466 Metal-dependent hydrolase AM393_RS13970 4bff45e71db35f2e2cbeaa3c4e9a2063 479 Gene3D G3DSA:3.20.20.140 69 396 3.7E-73 T 28-03-2018 AM393_RS13970 4bff45e71db35f2e2cbeaa3c4e9a2063 479 SUPERFAMILY SSF51338 4 71 8.84E-20 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM393_RS13970 4bff45e71db35f2e2cbeaa3c4e9a2063 479 SUPERFAMILY SSF51338 417 476 1.32E-12 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM393_RS05470 5cab7544bb22ba11fd9e08d0b2154c42 159 SUPERFAMILY SSF55729 8 138 1.56E-26 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM393_RS05470 5cab7544bb22ba11fd9e08d0b2154c42 159 Pfam PF00583 Acetyltransferase (GNAT) family 15 129 1.3E-12 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AM393_RS05470 5cab7544bb22ba11fd9e08d0b2154c42 159 Gene3D G3DSA:3.40.630.30 4 140 8.9E-21 T 28-03-2018 AM393_RS25975 90c01ead2c0849427b5ea507c8131b00 650 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 316 637 6.1E-128 T 28-03-2018 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal AM393_RS25975 90c01ead2c0849427b5ea507c8131b00 650 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 53 641 3.8E-278 T 28-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM393_RS25975 90c01ead2c0849427b5ea507c8131b00 650 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 132 149 1.1E-93 T 28-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM393_RS25975 90c01ead2c0849427b5ea507c8131b00 650 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 1.1E-93 T 28-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM393_RS25975 90c01ead2c0849427b5ea507c8131b00 650 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 160 182 1.1E-93 T 28-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM393_RS25975 90c01ead2c0849427b5ea507c8131b00 650 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 295 311 1.1E-93 T 28-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM393_RS25975 90c01ead2c0849427b5ea507c8131b00 650 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 211 237 1.1E-93 T 28-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM393_RS25975 90c01ead2c0849427b5ea507c8131b00 650 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 245 265 1.1E-93 T 28-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM393_RS25975 90c01ead2c0849427b5ea507c8131b00 650 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 311 330 1.1E-93 T 28-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM393_RS25975 90c01ead2c0849427b5ea507c8131b00 650 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 275 295 1.1E-93 T 28-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM393_RS25975 90c01ead2c0849427b5ea507c8131b00 650 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 314 329 2.7E-59 T 28-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM393_RS25975 90c01ead2c0849427b5ea507c8131b00 650 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 395 414 2.7E-59 T 28-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM393_RS25975 90c01ead2c0849427b5ea507c8131b00 650 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 631 644 2.7E-59 T 28-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM393_RS25975 90c01ead2c0849427b5ea507c8131b00 650 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 2.7E-59 T 28-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM393_RS25975 90c01ead2c0849427b5ea507c8131b00 650 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 352 369 2.7E-59 T 28-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM393_RS25975 90c01ead2c0849427b5ea507c8131b00 650 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 113 136 2.7E-59 T 28-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM393_RS25975 90c01ead2c0849427b5ea507c8131b00 650 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 190 205 2.7E-59 T 28-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM393_RS25975 90c01ead2c0849427b5ea507c8131b00 650 Pfam PF01578 Cytochrome C assembly protein 89 296 2.6E-55 T 28-03-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 AM393_RS08870 e541726deadc08602ef37f21b80f81ee 369 Gene3D G3DSA:3.40.50.2300 22 172 4.6E-38 T 28-03-2018 AM393_RS08870 e541726deadc08602ef37f21b80f81ee 369 Gene3D G3DSA:3.40.50.2300 173 350 2.6E-22 T 28-03-2018 AM393_RS08870 e541726deadc08602ef37f21b80f81ee 369 SUPERFAMILY SSF53822 24 363 1.24E-91 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AM393_RS08870 e541726deadc08602ef37f21b80f81ee 369 Pfam PF13458 Periplasmic binding protein 26 362 5.0E-62 T 28-03-2018 IPR028081 Leucine-binding protein domain AM393_RS08870 e541726deadc08602ef37f21b80f81ee 369 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 26 42 1.6E-63 T 28-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AM393_RS08870 e541726deadc08602ef37f21b80f81ee 369 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 254 272 1.6E-63 T 28-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AM393_RS08870 e541726deadc08602ef37f21b80f81ee 369 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 329 344 1.6E-63 T 28-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AM393_RS08870 e541726deadc08602ef37f21b80f81ee 369 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 67 85 1.6E-63 T 28-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AM393_RS08870 e541726deadc08602ef37f21b80f81ee 369 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 48 64 1.6E-63 T 28-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AM393_RS08870 e541726deadc08602ef37f21b80f81ee 369 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 277 290 1.6E-63 T 28-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AM393_RS08870 e541726deadc08602ef37f21b80f81ee 369 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 88 98 1.6E-63 T 28-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AM393_RS24275 c909417fd5e628a791fbf2d0ed430888 325 Pfam PF03060 Nitronate monooxygenase 7 323 3.5E-53 T 28-03-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 AM393_RS24275 c909417fd5e628a791fbf2d0ed430888 325 SUPERFAMILY SSF51412 5 323 4.81E-44 T 28-03-2018 AM393_RS24275 c909417fd5e628a791fbf2d0ed430888 325 Gene3D G3DSA:3.20.20.70 6 325 4.0E-42 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM393_RS00370 60e7b0250ea18c0b72eeb8ee2cc94513 114 Pfam PF01042 Endoribonuclease L-PSP 3 114 1.6E-28 T 28-03-2018 IPR006175 YjgF/YER057c/UK114 family AM393_RS00370 60e7b0250ea18c0b72eeb8ee2cc94513 114 SUPERFAMILY SSF55298 2 114 1.24E-27 T 28-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AM393_RS00370 60e7b0250ea18c0b72eeb8ee2cc94513 114 Gene3D G3DSA:3.30.1330.40 2 114 4.6E-22 T 28-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AM393_RS20230 d046659c6a164c8b4554ad84e4c14c2e 198 Pfam PF04994 TfoX C-terminal domain 117 194 9.5E-27 T 28-03-2018 IPR007077 TfoX, C-terminal AM393_RS20230 d046659c6a164c8b4554ad84e4c14c2e 198 Gene3D G3DSA:1.10.150.20 117 195 2.9E-19 T 28-03-2018 AM393_RS20230 d046659c6a164c8b4554ad84e4c14c2e 198 PIRSF PIRSF028788 1 198 3.8E-53 T 28-03-2018 IPR026256 Transcriptional regulator, TfoX/Sxy-type AM393_RS20230 d046659c6a164c8b4554ad84e4c14c2e 198 Gene3D G3DSA:3.30.1460.30 9 108 7.1E-16 T 28-03-2018 AM393_RS20230 d046659c6a164c8b4554ad84e4c14c2e 198 Pfam PF04993 TfoX N-terminal domain 16 105 9.0E-22 T 28-03-2018 IPR007076 TfoX, N-terminal AM393_RS20230 d046659c6a164c8b4554ad84e4c14c2e 198 SUPERFAMILY SSF159894 11 107 1.57E-22 T 28-03-2018 AM393_RS01070 7724dc9d237253391ee440f337a760b0 394 Gene3D G3DSA:3.50.50.60 2 385 8.2E-40 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS01070 7724dc9d237253391ee440f337a760b0 394 SUPERFAMILY SSF51905 5 221 1.94E-46 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS01070 7724dc9d237253391ee440f337a760b0 394 SUPERFAMILY SSF51905 319 377 1.94E-46 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS01070 7724dc9d237253391ee440f337a760b0 394 Pfam PF01266 FAD dependent oxidoreductase 5 355 2.9E-40 T 28-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AM393_RS01070 7724dc9d237253391ee440f337a760b0 394 PRINTS PR00419 Adrenodoxin reductase family signature 5 27 7.0E-5 T 28-03-2018 AM393_RS01070 7724dc9d237253391ee440f337a760b0 394 PRINTS PR00419 Adrenodoxin reductase family signature 28 41 7.0E-5 T 28-03-2018 AM393_RS03935 c11977458a481f2a845b8589264a06dd 290 Gene3D G3DSA:2.120.10.30 3 289 1.2E-36 T 28-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like AM393_RS03935 c11977458a481f2a845b8589264a06dd 290 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 15 32 3.4E-24 T 28-03-2018 IPR005511 Senescence marker protein-30 (SMP-30) AM393_RS03935 c11977458a481f2a845b8589264a06dd 290 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 194 211 3.4E-24 T 28-03-2018 IPR005511 Senescence marker protein-30 (SMP-30) AM393_RS03935 c11977458a481f2a845b8589264a06dd 290 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 132 154 3.4E-24 T 28-03-2018 IPR005511 Senescence marker protein-30 (SMP-30) AM393_RS03935 c11977458a481f2a845b8589264a06dd 290 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 91 112 3.4E-24 T 28-03-2018 IPR005511 Senescence marker protein-30 (SMP-30) AM393_RS03935 c11977458a481f2a845b8589264a06dd 290 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 155 175 3.4E-24 T 28-03-2018 IPR005511 Senescence marker protein-30 (SMP-30) AM393_RS03935 c11977458a481f2a845b8589264a06dd 290 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 236 254 3.4E-24 T 28-03-2018 IPR005511 Senescence marker protein-30 (SMP-30) AM393_RS03935 c11977458a481f2a845b8589264a06dd 290 SUPERFAMILY SSF63829 4 285 5.56E-63 T 28-03-2018 AM393_RS03935 c11977458a481f2a845b8589264a06dd 290 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 14 254 1.3E-74 T 28-03-2018 IPR013658 SMP-30/Gluconolactonase/LRE-like region AM393_RS25305 6d39f8439ecf10d26adcee9f48e9cb1f 246 Gene3D G3DSA:2.60.130.10 4 240 1.3E-58 T 28-03-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 AM393_RS25305 6d39f8439ecf10d26adcee9f48e9cb1f 246 TIGRFAM TIGR02422 protocat_beta: protocatechuate 3,4-dioxygenase, beta subunit 18 239 5.0E-110 T 28-03-2018 IPR012785 Protocatechuate 3,4-dioxygenase, beta subunit GO:0005506|GO:0018578|GO:0019619|GO:0055114 KEGG: 00362+1.13.11.3|KEGG: 00624+1.13.11.3 AM393_RS25305 6d39f8439ecf10d26adcee9f48e9cb1f 246 SUPERFAMILY SSF49482 11 240 2.75E-77 T 28-03-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 AM393_RS25305 6d39f8439ecf10d26adcee9f48e9cb1f 246 ProSitePatterns PS00083 Intradiol ring-cleavage dioxygenases signature. 82 110 - T 28-03-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 AM393_RS25305 6d39f8439ecf10d26adcee9f48e9cb1f 246 Pfam PF00775 Dioxygenase 48 231 4.7E-55 T 28-03-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 AM393_RS25305 6d39f8439ecf10d26adcee9f48e9cb1f 246 Pfam PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal 12 44 1.8E-15 T 28-03-2018 IPR024756 Protocatechuate 3,4-dioxygenase beta subunit, N-terminal KEGG: 00362+1.13.11.3|KEGG: 00624+1.13.11.3 AM393_RS13390 c5751a6901e182eb92e8b40724358bee 294 Pfam PF01261 Xylose isomerase-like TIM barrel 20 238 9.4E-36 T 28-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AM393_RS13390 c5751a6901e182eb92e8b40724358bee 294 SUPERFAMILY SSF51658 11 252 8.15E-42 T 28-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AM393_RS13390 c5751a6901e182eb92e8b40724358bee 294 Gene3D G3DSA:3.20.20.150 1 257 5.2E-36 T 28-03-2018 AM393_RS00725 90f3044f7b9b4a975d37646d31c1326e 131 Pfam PF01124 MAPEG family 3 120 4.2E-26 T 28-03-2018 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein AM393_RS00725 90f3044f7b9b4a975d37646d31c1326e 131 SUPERFAMILY SSF161084 4 127 8.76E-32 T 28-03-2018 AM393_RS00725 90f3044f7b9b4a975d37646d31c1326e 131 Gene3D G3DSA:1.20.120.550 1 127 7.3E-24 T 28-03-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain AM393_RS00320 a59d2f0f738edfd9c93ed52ada6c7b12 219 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 18 212 8.9E-53 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AM393_RS00320 a59d2f0f738edfd9c93ed52ada6c7b12 219 SUPERFAMILY SSF56529 11 213 1.44E-70 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AM393_RS00320 a59d2f0f738edfd9c93ed52ada6c7b12 219 Gene3D G3DSA:3.90.850.10 2 218 3.1E-72 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AM393_RS17855 de87bc3bcb8b82c860d6b83c81a2a533 340 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 119 340 4.7E-42 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS17855 de87bc3bcb8b82c860d6b83c81a2a533 340 Gene3D G3DSA:1.10.3720.10 3 329 1.7E-42 T 28-03-2018 AM393_RS17855 de87bc3bcb8b82c860d6b83c81a2a533 340 SUPERFAMILY SSF161098 97 165 6.02E-22 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS17855 de87bc3bcb8b82c860d6b83c81a2a533 340 SUPERFAMILY SSF161098 204 325 6.02E-22 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS21380 3fa408cb5f0a42a7703b2c4e8b92853e 136 SUPERFAMILY SSF55811 3 126 1.16E-31 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 AM393_RS21380 3fa408cb5f0a42a7703b2c4e8b92853e 136 Gene3D G3DSA:3.90.79.10 3 133 5.1E-29 T 28-03-2018 AM393_RS21380 3fa408cb5f0a42a7703b2c4e8b92853e 136 PRINTS PR00502 NUDIX hydrolase family signature 33 47 1.6E-6 T 28-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AM393_RS21380 3fa408cb5f0a42a7703b2c4e8b92853e 136 PRINTS PR00502 NUDIX hydrolase family signature 47 62 1.6E-6 T 28-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AM393_RS21380 3fa408cb5f0a42a7703b2c4e8b92853e 136 Pfam PF00293 NUDIX domain 6 125 4.3E-18 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AM393_RS21380 3fa408cb5f0a42a7703b2c4e8b92853e 136 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 28-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AM393_RS27510 66fb0b204ce732f902cfeced76c77c98 236 Pfam PF03358 NADPH-dependent FMN reductase 30 175 9.1E-27 T 28-03-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 AM393_RS27510 66fb0b204ce732f902cfeced76c77c98 236 SUPERFAMILY SSF52218 24 223 2.05E-64 T 28-03-2018 IPR029039 Flavoprotein-like domain AM393_RS27510 66fb0b204ce732f902cfeced76c77c98 236 Gene3D G3DSA:3.40.50.360 20 221 4.6E-47 T 28-03-2018 IPR029039 Flavoprotein-like domain AM393_RS27510 66fb0b204ce732f902cfeced76c77c98 236 TIGRFAM TIGR02690 resist_ArsH: arsenical resistance protein ArsH 23 222 1.2E-121 T 28-03-2018 IPR014063 Arsenate resistance ArsH AM393_RS01010 c454c7eff28db91d541e9473dd976e78 313 Gene3D G3DSA:3.10.350.10 48 88 4.6E-4 T 28-03-2018 AM393_RS01010 c454c7eff28db91d541e9473dd976e78 313 Gene3D G3DSA:2.40.440.10 93 233 3.4E-28 T 28-03-2018 AM393_RS01010 c454c7eff28db91d541e9473dd976e78 313 SUPERFAMILY SSF141523 98 147 7.85E-26 T 28-03-2018 AM393_RS01010 c454c7eff28db91d541e9473dd976e78 313 SUPERFAMILY SSF141523 176 233 7.85E-26 T 28-03-2018 AM393_RS01010 c454c7eff28db91d541e9473dd976e78 313 Pfam PF03734 L,D-transpeptidase catalytic domain 99 231 1.8E-16 T 28-03-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 AM393_RS05805 57c72a98086dd3a7de106d62f8f0f486 267 Pfam PF02627 Carboxymuconolactone decarboxylase family 53 129 1.3E-17 T 28-03-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AM393_RS05805 57c72a98086dd3a7de106d62f8f0f486 267 Pfam PF02627 Carboxymuconolactone decarboxylase family 175 254 4.2E-18 T 28-03-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AM393_RS05805 57c72a98086dd3a7de106d62f8f0f486 267 SUPERFAMILY SSF69118 27 264 8.23E-58 T 28-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AM393_RS05805 57c72a98086dd3a7de106d62f8f0f486 267 Gene3D G3DSA:1.20.1290.10 18 158 2.0E-28 T 28-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AM393_RS05805 57c72a98086dd3a7de106d62f8f0f486 267 Gene3D G3DSA:1.20.1290.10 159 267 1.8E-24 T 28-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AM393_RS05515 097860e1ed2486bf67d11ff722d61ce0 296 Gene3D G3DSA:1.10.3720.10 56 285 1.6E-45 T 28-03-2018 AM393_RS05515 097860e1ed2486bf67d11ff722d61ce0 296 Gene3D G3DSA:1.20.58.370 1 39 4.3E-5 T 28-03-2018 IPR035277 Maltose transport system permease protein MalF N-terminal domain AM393_RS05515 097860e1ed2486bf67d11ff722d61ce0 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 99 275 1.2E-16 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS05515 097860e1ed2486bf67d11ff722d61ce0 296 SUPERFAMILY SSF161098 50 274 2.88E-58 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS27305 012584e66447baaf4a0484d9481d4904 323 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 63 242 5.6E-47 T 28-03-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 AM393_RS27305 012584e66447baaf4a0484d9481d4904 323 Gene3D G3DSA:3.90.1530.10 57 158 4.6E-6 T 28-03-2018 AM393_RS27305 012584e66447baaf4a0484d9481d4904 323 SUPERFAMILY SSF110849 81 156 5.23E-10 T 28-03-2018 IPR003115 ParB/Sulfiredoxin AM393_RS27305 012584e66447baaf4a0484d9481d4904 323 Pfam PF02195 ParB-like nuclease domain 78 153 1.7E-10 T 28-03-2018 IPR003115 ParB/Sulfiredoxin AM393_RS27305 012584e66447baaf4a0484d9481d4904 323 SMART SM00470 67 154 2.7E-9 T 28-03-2018 IPR003115 ParB/Sulfiredoxin AM393_RS07990 8388bafe75cad99ef2cff2f4a384bfe9 111 Pfam PF05521 Phage head-tail joining protein 7 105 3.5E-24 T 28-03-2018 IPR008767 Bacteriophage SPP1, head-tail adaptor AM393_RS07990 8388bafe75cad99ef2cff2f4a384bfe9 111 TIGRFAM TIGR01563 gp16_SPP1: putative phage head-tail adaptor 7 105 7.5E-19 T 28-03-2018 IPR008767 Bacteriophage SPP1, head-tail adaptor AM393_RS09045 7bb6f76f78c55b3d45d8d846bf323863 337 Pfam PF01769 Divalent cation transporter 206 327 2.6E-27 T 28-03-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 AM393_RS09045 7bb6f76f78c55b3d45d8d846bf323863 337 Gene3D G3DSA:3.10.580.10 16 148 2.5E-15 T 28-03-2018 AM393_RS09045 7bb6f76f78c55b3d45d8d846bf323863 337 SUPERFAMILY SSF54631 23 158 9.69E-17 T 28-03-2018 AM393_RS09045 7bb6f76f78c55b3d45d8d846bf323863 337 SUPERFAMILY SSF161093 163 334 4.45E-48 T 28-03-2018 AM393_RS09045 7bb6f76f78c55b3d45d8d846bf323863 337 Gene3D G3DSA:1.10.357.20 162 336 1.1E-40 T 28-03-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 AM393_RS18940 34738848bba227f7a2cd0d2fc67cd5ac 427 Gene3D G3DSA:2.160.20.10 74 426 8.0E-46 T 28-03-2018 IPR012334 Pectin lyase fold AM393_RS18940 34738848bba227f7a2cd0d2fc67cd5ac 427 SUPERFAMILY SSF51126 76 157 1.83E-35 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor AM393_RS18940 34738848bba227f7a2cd0d2fc67cd5ac 427 SUPERFAMILY SSF51126 192 419 1.83E-35 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor AM393_RS18940 34738848bba227f7a2cd0d2fc67cd5ac 427 Pfam PF01095 Pectinesterase 191 341 6.3E-11 T 28-03-2018 IPR000070 Pectinesterase, catalytic GO:0005618|GO:0030599|GO:0042545 KEGG: 00040+3.1.1.11|MetaCyc: PWY-1081|MetaCyc: PWY-7246|MetaCyc: PWY-7248 AM393_RS18940 34738848bba227f7a2cd0d2fc67cd5ac 427 ProSitePatterns PS00503 Pectinesterase signature 2. 280 289 - T 28-03-2018 IPR033131 Pectinesterase, Asp active site KEGG: 00040+3.1.1.11|MetaCyc: PWY-1081|MetaCyc: PWY-7246|MetaCyc: PWY-7248 AM393_RS24965 1f83bcaf823a22740bcfb828c45fbcfe 233 Gene3D G3DSA:3.40.50.300 4 226 1.0E-66 T 28-03-2018 AM393_RS24965 1f83bcaf823a22740bcfb828c45fbcfe 233 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS24965 1f83bcaf823a22740bcfb828c45fbcfe 233 Pfam PF00005 ABC transporter 22 168 1.3E-35 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS24965 1f83bcaf823a22740bcfb828c45fbcfe 233 SUPERFAMILY SSF52540 7 224 8.54E-74 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS24965 1f83bcaf823a22740bcfb828c45fbcfe 233 SMART SM00382 31 218 4.1E-18 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS19790 1bab0e33c7e457c9d9e176451e75e71e 333 PIRSF PIRSF017617 1 333 2.2E-129 T 28-03-2018 IPR023603 Threonine aldolase AM393_RS19790 1bab0e33c7e457c9d9e176451e75e71e 333 Pfam PF01212 Beta-eliminating lyase 3 282 1.1E-94 T 28-03-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 AM393_RS19790 1bab0e33c7e457c9d9e176451e75e71e 333 Gene3D G3DSA:3.40.640.10 17 247 2.1E-46 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM393_RS19790 1bab0e33c7e457c9d9e176451e75e71e 333 Gene3D G3DSA:3.90.1150.10 248 333 7.5E-18 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM393_RS19790 1bab0e33c7e457c9d9e176451e75e71e 333 SUPERFAMILY SSF53383 2 332 2.86E-113 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM393_RS24165 0cf19ff1275166b8059cbfe45fc14f68 206 Pfam PF01810 LysE type translocator 17 204 2.4E-30 T 28-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AM393_RS24165 0cf19ff1275166b8059cbfe45fc14f68 206 PIRSF PIRSF006324 1 206 2.2E-49 T 28-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AM393_RS17780 732dbaf6cac54e4b867014be2d9c63e4 239 Pfam PF09992 Phosphodiester glycosidase 71 216 3.1E-21 T 28-03-2018 IPR018711 Phosphodiester glycosidase AM393_RS05310 86570da58663617aff3f1fa4d89bb30e 370 SUPERFAMILY SSF56796 2 368 2.75E-105 T 28-03-2018 AM393_RS05310 86570da58663617aff3f1fa4d89bb30e 370 Gene3D G3DSA:3.40.50.1970 1 165 7.5E-40 T 28-03-2018 AM393_RS05310 86570da58663617aff3f1fa4d89bb30e 370 Gene3D G3DSA:1.20.1090.10 166 369 4.1E-55 T 28-03-2018 AM393_RS05310 86570da58663617aff3f1fa4d89bb30e 370 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 359 4.8E-107 T 28-03-2018 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 AM393_RS05310 86570da58663617aff3f1fa4d89bb30e 370 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 154 182 - T 28-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 AM393_RS12955 ca253c514c2695e0c484f1b26761df03 467 Pfam PF00324 Amino acid permease 27 465 2.7E-120 T 28-03-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 AM393_RS12955 ca253c514c2695e0c484f1b26761df03 467 ProSitePatterns PS00218 Amino acid permeases signature. 52 82 - T 28-03-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 AM393_RS12955 ca253c514c2695e0c484f1b26761df03 467 PIRSF PIRSF006060 1 466 2.2E-69 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AM393_RS25655 9d080da1275b2d5b31ca725c82f84033 209 Pfam PF01810 LysE type translocator 15 204 2.2E-35 T 28-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AM393_RS10335 f8bc76a2f01341b6750f5c70a1eafb76 377 Pfam PF01103 Surface antigen 109 377 4.6E-12 T 28-03-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 AM393_RS10335 f8bc76a2f01341b6750f5c70a1eafb76 377 Gene3D G3DSA:2.40.160.50 47 377 2.4E-40 T 28-03-2018 AM393_RS16895 ab4bb21488707ffb9a70bb0054469ff0 240 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 3 232 3.2E-112 T 28-03-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 AM393_RS16895 ab4bb21488707ffb9a70bb0054469ff0 240 Pfam PF00149 Calcineurin-like phosphoesterase 4 199 4.7E-9 T 28-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AM393_RS16895 ab4bb21488707ffb9a70bb0054469ff0 240 Gene3D G3DSA:3.60.21.10 3 233 1.3E-22 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like AM393_RS16895 ab4bb21488707ffb9a70bb0054469ff0 240 SUPERFAMILY SSF56300 3 123 1.39E-30 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like AM393_RS16895 ab4bb21488707ffb9a70bb0054469ff0 240 SUPERFAMILY SSF56300 151 224 1.39E-30 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like AM393_RS16895 ab4bb21488707ffb9a70bb0054469ff0 240 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 240 133.731 T 28-03-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 AM393_RS17440 57934ef3b2eeb523726479e2d2ee7cb1 466 TIGRFAM TIGR01322 scrB_fam: sucrose-6-phosphate hydrolase 15 439 2.1E-164 T 28-03-2018 IPR006232 Sucrose-6-phosphate hydrolase GO:0004564|GO:0005737|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 AM393_RS17440 57934ef3b2eeb523726479e2d2ee7cb1 466 Gene3D G3DSA:2.60.120.560 366 455 2.0E-12 T 28-03-2018 AM393_RS17440 57934ef3b2eeb523726479e2d2ee7cb1 466 Gene3D G3DSA:2.115.10.20 36 365 1.0E-94 T 28-03-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain AM393_RS17440 57934ef3b2eeb523726479e2d2ee7cb1 466 Pfam PF08244 Glycosyl hydrolases family 32 C terminal 403 442 3.6E-10 T 28-03-2018 IPR013189 Glycosyl hydrolase family 32, C-terminal AM393_RS17440 57934ef3b2eeb523726479e2d2ee7cb1 466 SUPERFAMILY SSF49899 338 464 5.62E-19 T 28-03-2018 IPR013320 Concanavalin A-like lectin/glucanase domain AM393_RS17440 57934ef3b2eeb523726479e2d2ee7cb1 466 SMART SM00640 31 429 1.9E-136 T 28-03-2018 IPR001362 Glycoside hydrolase, family 32 GO:0004553|GO:0005975 AM393_RS17440 57934ef3b2eeb523726479e2d2ee7cb1 466 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 31 336 6.8E-97 T 28-03-2018 IPR013148 Glycosyl hydrolase family 32, N-terminal AM393_RS17440 57934ef3b2eeb523726479e2d2ee7cb1 466 SUPERFAMILY SSF75005 22 336 4.4E-101 T 28-03-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain AM393_RS17440 57934ef3b2eeb523726479e2d2ee7cb1 466 ProSitePatterns PS00609 Glycosyl hydrolases family 32 active site. 31 44 - T 28-03-2018 IPR018053 Glycoside hydrolase, family 32, active site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 AM393_RS09710 abce131598c67c375862fcdb1261a492 404 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 3 395 5.9E-164 T 28-03-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 AM393_RS09710 abce131598c67c375862fcdb1261a492 404 Pfam PF02441 Flavoprotein 6 179 2.6E-42 T 28-03-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 AM393_RS09710 abce131598c67c375862fcdb1261a492 404 Gene3D G3DSA:3.40.50.10300 185 403 3.2E-69 T 28-03-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 AM393_RS09710 abce131598c67c375862fcdb1261a492 404 SUPERFAMILY SSF102645 185 399 1.44E-78 T 28-03-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 AM393_RS09710 abce131598c67c375862fcdb1261a492 404 Gene3D G3DSA:3.40.50.1950 1 184 4.7E-53 T 28-03-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 AM393_RS09710 abce131598c67c375862fcdb1261a492 404 SUPERFAMILY SSF52507 3 180 5.23E-58 T 28-03-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 AM393_RS09710 abce131598c67c375862fcdb1261a492 404 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 188 369 2.4E-72 T 28-03-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 AM393_RS13165 f215199930dcfb5df8905f0ea9208292 154 SUPERFAMILY SSF102114 16 117 4.84E-7 T 28-03-2018 AM393_RS13165 f215199930dcfb5df8905f0ea9208292 154 Pfam PF13353 4Fe-4S single cluster domain 12 151 2.6E-51 T 28-03-2018 AM393_RS13165 f215199930dcfb5df8905f0ea9208292 154 TIGRFAM TIGR02491 NrdG: anaerobic ribonucleoside-triphosphate reductase activating protein 2 153 5.2E-65 T 28-03-2018 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 AM393_RS13165 f215199930dcfb5df8905f0ea9208292 154 PIRSF PIRSF000368 1 154 4.4E-61 T 28-03-2018 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 AM393_RS13165 f215199930dcfb5df8905f0ea9208292 154 ProSitePatterns PS01087 Radical activating enzymes signature. 14 35 - T 28-03-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 AM393_RS13165 f215199930dcfb5df8905f0ea9208292 154 Gene3D G3DSA:3.20.20.70 12 128 9.1E-11 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM393_RS27100 af5054b2399a3b47dd35261a04a1a0db 92 SUPERFAMILY SSF47413 28 90 9.38E-17 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM393_RS27100 af5054b2399a3b47dd35261a04a1a0db 92 Gene3D G3DSA:1.10.10.60 13 54 2.7E-4 T 28-03-2018 AM393_RS27100 af5054b2399a3b47dd35261a04a1a0db 92 Pfam PF13560 Helix-turn-helix domain 32 85 1.8E-12 T 28-03-2018 AM393_RS27100 af5054b2399a3b47dd35261a04a1a0db 92 Gene3D G3DSA:3.30.1190.10 55 91 5.7E-13 T 28-03-2018 AM393_RS27100 af5054b2399a3b47dd35261a04a1a0db 92 SMART SM00530 35 90 1.7E-10 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM393_RS15555 6da74834f936d292582156e2c21e1e7a 155 SUPERFAMILY SSF53098 4 143 7.71E-59 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM393_RS15555 6da74834f936d292582156e2c21e1e7a 155 Hamap MF_00042 Ribonuclease H [rnhA]. 2 149 39.286 T 28-03-2018 IPR022892 Ribonuclease HI GO:0004523 AM393_RS15555 6da74834f936d292582156e2c21e1e7a 155 Pfam PF00075 RNase H 3 141 2.4E-55 T 28-03-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 AM393_RS15555 6da74834f936d292582156e2c21e1e7a 155 Gene3D G3DSA:3.30.420.10 1 151 8.0E-54 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM393_RS23125 dcd5f5c8bc3e5cc72440cd8dbea4356d 319 Pfam PF03547 Membrane transport protein 165 313 8.2E-27 T 28-03-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 AM393_RS23125 dcd5f5c8bc3e5cc72440cd8dbea4356d 319 Pfam PF03547 Membrane transport protein 5 164 7.3E-36 T 28-03-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 AM393_RS23125 dcd5f5c8bc3e5cc72440cd8dbea4356d 319 TIGRFAM TIGR00946 2a69: auxin efflux carrier 1 317 3.7E-78 T 28-03-2018 IPR014024 Auxin efflux carrier, plant type AM393_RS18860 d47cdddecb829c51a896d45d03c8b8d1 49 Hamap MF_01484 Multidrug efflux pump accessory protein AcrZ [acrZ]. 1 46 19.566 T 28-03-2018 IPR019702 Multidrug efflux pump accessory protein AcrZ GO:0005886|GO:0006855|GO:0015238 AM393_RS18860 d47cdddecb829c51a896d45d03c8b8d1 49 Pfam PF10766 Multidrug efflux pump-associated protein AcrZ 1 48 5.4E-31 T 28-03-2018 IPR019702 Multidrug efflux pump accessory protein AcrZ GO:0005886|GO:0006855|GO:0015238 AM393_RS23470 a559cfdcc79e00db6bad9f701970f8f7 160 Pfam PF01381 Helix-turn-helix 7 60 2.1E-17 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM393_RS23470 a559cfdcc79e00db6bad9f701970f8f7 160 Gene3D G3DSA:1.10.260.40 1 87 3.6E-18 T 28-03-2018 AM393_RS23470 a559cfdcc79e00db6bad9f701970f8f7 160 SUPERFAMILY SSF47413 4 60 2.36E-15 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM393_RS23470 a559cfdcc79e00db6bad9f701970f8f7 160 Pfam PF13239 2TM domain 81 158 1.2E-13 T 28-03-2018 IPR025698 2TM domain AM393_RS23470 a559cfdcc79e00db6bad9f701970f8f7 160 SMART SM00530 6 60 3.5E-16 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM393_RS11995 c5392b0b332390fef2f2e13042bf6633 246 Pfam PF03591 AzlC protein 15 153 1.3E-33 T 28-03-2018 IPR011606 Branched-chain amino acid transport, permease AM393_RS20535 f1188be87ba8c5ee29589c5489d0bf3a 225 Pfam PF00857 Isochorismatase family 19 172 2.0E-22 T 28-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AM393_RS20535 f1188be87ba8c5ee29589c5489d0bf3a 225 Gene3D G3DSA:3.40.50.850 10 215 2.2E-41 T 28-03-2018 AM393_RS20535 f1188be87ba8c5ee29589c5489d0bf3a 225 SUPERFAMILY SSF52499 13 209 2.22E-48 T 28-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AM393_RS03285 07ceee925ba16838b316a0d4b4a3661b 268 Gene3D G3DSA:1.20.1200.10 94 251 6.2E-16 T 28-03-2018 AM393_RS03285 07ceee925ba16838b316a0d4b4a3661b 268 Pfam PF01923 Cobalamin adenosyltransferase 95 245 8.1E-12 T 28-03-2018 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741 AM393_RS03285 07ceee925ba16838b316a0d4b4a3661b 268 PIRSF PIRSF012294 1 254 4.8E-100 T 28-03-2018 IPR009194 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase, EutT-type GO:0005524|GO:0006580|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 AM393_RS03285 07ceee925ba16838b316a0d4b4a3661b 268 SUPERFAMILY SSF89028 93 247 2.94E-10 T 28-03-2018 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741 AM393_RS20145 d6f41fd677b8d17c5d806e41399cd5c1 191 TIGRFAM TIGR03567 FMN_reduc_SsuE: FMN reductase 2 171 4.7E-72 T 28-03-2018 IPR020048 NADPH-dependent FMN reductase, SsuE GO:0008752|GO:0046306|GO:0055114 KEGG: 00740+1.5.1.38|MetaCyc: PWY-7723 AM393_RS20145 d6f41fd677b8d17c5d806e41399cd5c1 191 Gene3D G3DSA:3.40.50.360 1 185 2.9E-33 T 28-03-2018 IPR029039 Flavoprotein-like domain AM393_RS20145 d6f41fd677b8d17c5d806e41399cd5c1 191 SUPERFAMILY SSF52218 1 168 2.95E-32 T 28-03-2018 IPR029039 Flavoprotein-like domain AM393_RS20145 d6f41fd677b8d17c5d806e41399cd5c1 191 Pfam PF03358 NADPH-dependent FMN reductase 1 140 6.7E-35 T 28-03-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 AM393_RS18420 d90502c4832bb836635011f00fc31f5b 391 Gene3D G3DSA:3.50.50.60 5 363 4.7E-49 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS18420 d90502c4832bb836635011f00fc31f5b 391 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 295 311 9.2E-19 T 28-03-2018 AM393_RS18420 d90502c4832bb836635011f00fc31f5b 391 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 157 172 9.2E-19 T 28-03-2018 AM393_RS18420 d90502c4832bb836635011f00fc31f5b 391 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 7 29 9.2E-19 T 28-03-2018 AM393_RS18420 d90502c4832bb836635011f00fc31f5b 391 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 280 295 9.2E-19 T 28-03-2018 AM393_RS18420 d90502c4832bb836635011f00fc31f5b 391 SUPERFAMILY SSF51905 6 178 2.72E-61 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS18420 d90502c4832bb836635011f00fc31f5b 391 SUPERFAMILY SSF51905 267 383 2.72E-61 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS18420 d90502c4832bb836635011f00fc31f5b 391 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 294 307 - T 28-03-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 AM393_RS18420 d90502c4832bb836635011f00fc31f5b 391 Pfam PF01494 FAD binding domain 6 340 3.3E-36 T 28-03-2018 IPR002938 FAD-binding domain GO:0071949 AM393_RS18420 d90502c4832bb836635011f00fc31f5b 391 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 7 390 5.6E-130 T 28-03-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 AM393_RS25195 703180b302abbf88670e6c493acdedf5 381 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 62 83 2.7E-6 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM393_RS25195 703180b302abbf88670e6c493acdedf5 381 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 136 152 2.7E-6 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM393_RS25195 703180b302abbf88670e6c493acdedf5 381 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 276 295 2.7E-6 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM393_RS25195 703180b302abbf88670e6c493acdedf5 381 Gene3D G3DSA:3.40.190.10 159 327 1.7E-29 T 28-03-2018 AM393_RS25195 703180b302abbf88670e6c493acdedf5 381 Pfam PF13416 Bacterial extracellular solute-binding protein 56 327 4.5E-25 T 28-03-2018 AM393_RS25195 703180b302abbf88670e6c493acdedf5 381 Gene3D G3DSA:3.40.190.10 35 158 3.8E-16 T 28-03-2018 AM393_RS25195 703180b302abbf88670e6c493acdedf5 381 SUPERFAMILY SSF53850 33 360 3.11E-52 T 28-03-2018 AM393_RS22930 282addf4e6d2e9fce1d7aebba3c358e2 460 Pfam PF13520 Amino acid permease 5 414 2.6E-72 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AM393_RS22930 282addf4e6d2e9fce1d7aebba3c358e2 460 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 3 459 2.9E-175 T 28-03-2018 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 AM393_RS22930 282addf4e6d2e9fce1d7aebba3c358e2 460 PIRSF PIRSF006060 1 459 6.6E-45 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AM393_RS16690 6afca663f5fb82e299cf886215aec24e 72 Pfam PF05321 Haemolysin expression modulating protein 13 69 2.1E-33 T 28-03-2018 IPR007985 Haemolysin expression modulating, HHA AM393_RS16690 6afca663f5fb82e299cf886215aec24e 72 Gene3D G3DSA:1.20.1280.40 6 71 4.1E-34 T 28-03-2018 IPR007985 Haemolysin expression modulating, HHA AM393_RS16690 6afca663f5fb82e299cf886215aec24e 72 SUPERFAMILY SSF68989 2 72 1.23E-31 T 28-03-2018 IPR007985 Haemolysin expression modulating, HHA AM393_RS15850 bf3645fa9c906cf58a9d5a7f570eea28 396 Pfam PF00589 Phage integrase family 206 370 2.4E-24 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM393_RS15850 bf3645fa9c906cf58a9d5a7f570eea28 396 Pfam PF13356 Arm DNA-binding domain 3 88 6.9E-20 T 28-03-2018 IPR025166 Integrase, DNA-binding domain AM393_RS15850 bf3645fa9c906cf58a9d5a7f570eea28 396 SUPERFAMILY SSF56349 100 378 2.94E-63 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AM393_RS15850 bf3645fa9c906cf58a9d5a7f570eea28 396 Gene3D G3DSA:1.10.443.10 205 385 7.3E-28 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM393_RS15850 bf3645fa9c906cf58a9d5a7f570eea28 396 Gene3D G3DSA:1.10.150.130 88 204 4.6E-18 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal AM393_RS13175 568a15fc5788216e08e1fdf2a7b7ab74 247 Gene3D G3DSA:1.10.10.10 1 117 3.2E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS13175 568a15fc5788216e08e1fdf2a7b7ab74 247 SUPERFAMILY SSF53697 106 244 3.61E-10 T 28-03-2018 AM393_RS13175 568a15fc5788216e08e1fdf2a7b7ab74 247 Gene3D G3DSA:3.40.50.10490 118 238 2.6E-8 T 28-03-2018 AM393_RS13175 568a15fc5788216e08e1fdf2a7b7ab74 247 Pfam PF01418 Helix-turn-helix domain, rpiR family 1 73 8.7E-13 T 28-03-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 AM393_RS13175 568a15fc5788216e08e1fdf2a7b7ab74 247 SUPERFAMILY SSF46689 1 75 1.79E-15 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS09875 cde08c710424e9dcca2c433c330dca73 463 Pfam PF00860 Permease family 34 426 1.0E-108 T 28-03-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 AM393_RS09875 cde08c710424e9dcca2c433c330dca73 463 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 29 457 1.5E-138 T 28-03-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 AM393_RS09875 cde08c710424e9dcca2c433c330dca73 463 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 375 395 - T 28-03-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 AM393_RS20685 41b1acc24223f4507efe74fad1760180 194 Pfam PF13302 Acetyltransferase (GNAT) domain 17 162 7.6E-19 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AM393_RS20685 41b1acc24223f4507efe74fad1760180 194 Gene3D G3DSA:3.40.630.30 1 194 5.1E-31 T 28-03-2018 AM393_RS20685 41b1acc24223f4507efe74fad1760180 194 SUPERFAMILY SSF55729 12 185 1.35E-42 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM393_RS09905 361a023e506a6510b547ed3c710df9a2 464 Gene3D G3DSA:1.20.1250.20 15 212 1.5E-14 T 28-03-2018 AM393_RS09905 361a023e506a6510b547ed3c710df9a2 464 Pfam PF13347 MFS/sugar transport protein 13 427 3.1E-104 T 28-03-2018 AM393_RS09905 361a023e506a6510b547ed3c710df9a2 464 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 11 443 9.5E-151 T 28-03-2018 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 AM393_RS09905 361a023e506a6510b547ed3c710df9a2 464 ProSitePatterns PS00872 Sodium:galactoside symporter family signature. 62 87 - T 28-03-2018 IPR018043 Sodium:galactoside symporter, conserved site GO:0005215|GO:0006814|GO:0016020 AM393_RS09905 361a023e506a6510b547ed3c710df9a2 464 SUPERFAMILY SSF103473 13 421 1.01E-31 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS09905 361a023e506a6510b547ed3c710df9a2 464 Gene3D G3DSA:1.20.1250.20 213 454 1.5E-11 T 28-03-2018 AM393_RS21730 03955f04dcf06e9a1c5bd8e72dc15bfc 255 SUPERFAMILY SSF48317 145 232 7.33E-32 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AM393_RS21730 03955f04dcf06e9a1c5bd8e72dc15bfc 255 SUPERFAMILY SSF48317 10 113 7.33E-32 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AM393_RS21730 03955f04dcf06e9a1c5bd8e72dc15bfc 255 SMART SM00014 77 227 1.4E-38 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AM393_RS21730 03955f04dcf06e9a1c5bd8e72dc15bfc 255 Gene3D G3DSA:1.20.144.10 5 250 1.9E-23 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AM393_RS21730 03955f04dcf06e9a1c5bd8e72dc15bfc 255 Pfam PF01569 PAP2 superfamily 80 232 2.2E-30 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AM393_RS14510 7badc6ddbe8227c99da971061c6ac08c 446 TIGRFAM TIGR00783 ccs: citrate carrier protein, CCS family 18 441 1.3E-177 T 28-03-2018 IPR018025 2-hydroxycarboxylate transporter, Proteobacteria/Firmicutes AM393_RS14510 7badc6ddbe8227c99da971061c6ac08c 446 PIRSF PIRSF005348 3 446 3.3E-155 T 28-03-2018 IPR004679 2-hydroxycarboxylate transporter GO:0008514|GO:0015711|GO:0016021 AM393_RS14510 7badc6ddbe8227c99da971061c6ac08c 446 Pfam PF03390 2-hydroxycarboxylate transporter family 23 440 2.0E-146 T 28-03-2018 IPR004679 2-hydroxycarboxylate transporter GO:0008514|GO:0015711|GO:0016021 AM393_RS09680 6bd72e81d81fd9f9b19f6a1ca49bf7fb 258 SUPERFAMILY SSF53448 4 147 3.28E-27 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM393_RS09680 6bd72e81d81fd9f9b19f6a1ca49bf7fb 258 Pfam PF00535 Glycosyl transferase family 2 6 138 4.5E-20 T 28-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AM393_RS09680 6bd72e81d81fd9f9b19f6a1ca49bf7fb 258 Gene3D G3DSA:3.90.550.10 2 228 9.5E-24 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM393_RS19225 77d12c5ebbe9c7efe05ace45f1385dd0 295 SUPERFAMILY SSF103481 184 279 4.84E-9 T 28-03-2018 AM393_RS19225 77d12c5ebbe9c7efe05ace45f1385dd0 295 Pfam PF00892 EamA-like transporter family 148 277 4.3E-18 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM393_RS19225 77d12c5ebbe9c7efe05ace45f1385dd0 295 SUPERFAMILY SSF103481 46 136 5.49E-7 T 28-03-2018 AM393_RS02460 6930dafa4d84964616beba13adf20015 217 Pfam PF13532 2OG-Fe(II) oxygenase superfamily 18 210 1.6E-54 T 28-03-2018 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like AM393_RS02460 6930dafa4d84964616beba13adf20015 217 SUPERFAMILY SSF51197 15 211 1.19E-61 T 28-03-2018 AM393_RS02460 6930dafa4d84964616beba13adf20015 217 Gene3D G3DSA:2.60.120.590 11 216 4.3E-51 T 28-03-2018 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like AM393_RS00105 28f0aeb413b5fb467e2bc8039d658688 179 Pfam PF09831 Uncharacterized protein conserved in bacteria (DUF2058) 5 179 5.7E-59 T 28-03-2018 IPR018636 Protein of unknown function DUF2058 AM393_RS03585 7281ae2cf0660ac9da93298311fcffe7 428 PIRSF PIRSF036388 1 428 1.5E-233 T 28-03-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 AM393_RS03585 7281ae2cf0660ac9da93298311fcffe7 428 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 275 282 - T 28-03-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AM393_RS03585 7281ae2cf0660ac9da93298311fcffe7 428 Gene3D G3DSA:3.40.630.10 93 428 7.1E-114 T 28-03-2018 AM393_RS03585 7281ae2cf0660ac9da93298311fcffe7 428 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 109 421 1.9E-105 T 28-03-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AM393_RS03585 7281ae2cf0660ac9da93298311fcffe7 428 PRINTS PR00481 Cytosol aminopeptidase signature 190 207 1.5E-45 T 28-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AM393_RS03585 7281ae2cf0660ac9da93298311fcffe7 428 PRINTS PR00481 Cytosol aminopeptidase signature 299 314 1.5E-45 T 28-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AM393_RS03585 7281ae2cf0660ac9da93298311fcffe7 428 PRINTS PR00481 Cytosol aminopeptidase signature 271 291 1.5E-45 T 28-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AM393_RS03585 7281ae2cf0660ac9da93298311fcffe7 428 PRINTS PR00481 Cytosol aminopeptidase signature 212 233 1.5E-45 T 28-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AM393_RS03585 7281ae2cf0660ac9da93298311fcffe7 428 PRINTS PR00481 Cytosol aminopeptidase signature 249 270 1.5E-45 T 28-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AM393_RS03585 7281ae2cf0660ac9da93298311fcffe7 428 SUPERFAMILY SSF53187 107 426 1.48E-104 T 28-03-2018 AM393_RS03585 7281ae2cf0660ac9da93298311fcffe7 428 Hamap MF_00504 Peptidase B [pepB]. 3 427 64.534 T 28-03-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 AM393_RS03585 7281ae2cf0660ac9da93298311fcffe7 428 Pfam PF12404 Peptidase 5 81 9.1E-31 T 28-03-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 AM393_RS11800 8efcce564bbe845676327ec97dd49649 196 Gene3D G3DSA:1.20.1590.10 5 194 5.3E-78 T 28-03-2018 IPR023381 YP001051499.1-like domain AM393_RS11800 8efcce564bbe845676327ec97dd49649 196 Pfam PF04222 Protein of unknown function (DUF416) 5 193 2.1E-82 T 28-03-2018 IPR007338 Protein of unknown function DUF416 AM393_RS07380 f840366c876dcc141c37ee271db50942 128 SUPERFAMILY SSF52980 16 123 5.36E-24 T 28-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AM393_RS07380 f840366c876dcc141c37ee271db50942 128 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 15 126 4.9E-52 T 28-03-2018 IPR003509 Uncharacterised protein family UPF0102 AM393_RS07380 f840366c876dcc141c37ee271db50942 128 Hamap MF_00048 UPF0102 protein YraN [yraN]. 15 127 24.212 T 28-03-2018 IPR003509 Uncharacterised protein family UPF0102 AM393_RS07380 f840366c876dcc141c37ee271db50942 128 Pfam PF02021 Uncharacterised protein family UPF0102 23 113 2.9E-26 T 28-03-2018 IPR003509 Uncharacterised protein family UPF0102 AM393_RS07380 f840366c876dcc141c37ee271db50942 128 Gene3D G3DSA:3.40.1350.10 21 128 3.2E-35 T 28-03-2018 AM393_RS28930 c3cf838ef4b809ab56f00d0215cf7e53 110 Gene3D G3DSA:2.60.120.10 1 89 8.0E-11 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AM393_RS28930 c3cf838ef4b809ab56f00d0215cf7e53 110 SUPERFAMILY SSF51182 2 79 2.2E-11 T 28-03-2018 IPR011051 RmlC-like cupin domain AM393_RS28930 c3cf838ef4b809ab56f00d0215cf7e53 110 TIGRFAM TIGR04366 cupin_WbuC: cupin fold metalloprotein, WbuC family 1 84 1.8E-25 T 28-03-2018 IPR027565 Cupin fold metalloprotein, WbuC family AM393_RS08965 5afadff072e03d0005c987ece8e47f38 349 Pfam PF01594 AI-2E family transporter 14 328 3.6E-75 T 28-03-2018 IPR002549 Transmembrane protein TqsA-like AM393_RS25075 b524bf09cdf3baa2ca4b13ed804aa74e 73 Pfam PF06004 Bacterial protein of unknown function (DUF903) 23 71 5.7E-23 T 28-03-2018 IPR010305 Protein of unknown function DUF903 AM393_RS25075 b524bf09cdf3baa2ca4b13ed804aa74e 73 Gene3D G3DSA:2.30.30.100 21 71 8.5E-24 T 28-03-2018 AM393_RS25075 b524bf09cdf3baa2ca4b13ed804aa74e 73 SUPERFAMILY SSF50182 21 71 2.18E-17 T 28-03-2018 IPR010920 LSM domain AM393_RS05705 33220af6af3790299b6dedf68b1da2b8 166 Gene3D G3DSA:2.60.40.1090 35 166 4.9E-27 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM393_RS05705 33220af6af3790299b6dedf68b1da2b8 166 SUPERFAMILY SSF49401 26 165 3.68E-25 T 28-03-2018 IPR008966 Adhesion domain AM393_RS23725 b3afa4bf43641cfe3a215e7ee656df0f 314 Pfam PF12852 Cupin 7 195 3.3E-31 T 28-03-2018 IPR032783 AraC-type transcription regulator, ligand-binding domain AM393_RS23725 b3afa4bf43641cfe3a215e7ee656df0f 314 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 264 306 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM393_RS23725 b3afa4bf43641cfe3a215e7ee656df0f 314 SUPERFAMILY SSF46689 263 312 4.08E-10 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS23725 b3afa4bf43641cfe3a215e7ee656df0f 314 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 212 256 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM393_RS23725 b3afa4bf43641cfe3a215e7ee656df0f 314 SUPERFAMILY SSF46689 210 261 2.46E-8 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS23725 b3afa4bf43641cfe3a215e7ee656df0f 314 Gene3D G3DSA:2.60.120.280 10 195 3.6E-9 T 28-03-2018 AM393_RS23725 b3afa4bf43641cfe3a215e7ee656df0f 314 Pfam PF12833 Helix-turn-helix domain 233 311 4.1E-19 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM393_RS23725 b3afa4bf43641cfe3a215e7ee656df0f 314 Gene3D G3DSA:1.10.10.60 263 314 4.9E-11 T 28-03-2018 AM393_RS23725 b3afa4bf43641cfe3a215e7ee656df0f 314 Gene3D G3DSA:1.10.10.60 204 262 2.4E-13 T 28-03-2018 AM393_RS23725 b3afa4bf43641cfe3a215e7ee656df0f 314 SMART SM00342 227 310 5.6E-29 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM393_RS16235 b32b6f76ceb25bf18a858fd69774a8ac 147 SUPERFAMILY SSF55804 4 144 7.85E-29 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 AM393_RS16235 b32b6f76ceb25bf18a858fd69774a8ac 147 Gene3D G3DSA:3.40.930.10 1 146 5.4E-24 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 AM393_RS16235 b32b6f76ceb25bf18a858fd69774a8ac 147 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 4 144 3.4E-24 T 28-03-2018 IPR002178 PTS EIIA type-2 domain AM393_RS10440 8e8f8ebe7bafcb3d333a69ee133e8e77 239 Gene3D G3DSA:3.40.50.1360 1 239 2.9E-50 T 28-03-2018 AM393_RS10440 8e8f8ebe7bafcb3d333a69ee133e8e77 239 SUPERFAMILY SSF100950 1 237 5.8E-57 T 28-03-2018 AM393_RS10440 8e8f8ebe7bafcb3d333a69ee133e8e77 239 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 24 220 1.9E-20 T 28-03-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 AM393_RS10440 8e8f8ebe7bafcb3d333a69ee133e8e77 239 ProSitePatterns PS01161 Glucosamine/galactosamine-6-phosphate isomerases signature. 113 131 - T 28-03-2018 IPR018321 Glucosamine-6-phosphate isomerase, conserved site GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70326 AM393_RS12295 bad3278743cdf316fe381ad520d3a082 170 Pfam PF00419 Fimbrial protein 22 170 1.7E-10 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM393_RS12295 bad3278743cdf316fe381ad520d3a082 170 SUPERFAMILY SSF49401 21 170 9.44E-20 T 28-03-2018 IPR008966 Adhesion domain AM393_RS12295 bad3278743cdf316fe381ad520d3a082 170 Gene3D G3DSA:2.60.40.1090 17 170 4.4E-25 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM393_RS25355 d052ce96aa1cd407e0896d25d466c037 384 Gene3D G3DSA:1.20.1250.20 2 192 2.8E-23 T 28-03-2018 AM393_RS25355 d052ce96aa1cd407e0896d25d466c037 384 Pfam PF07690 Major Facilitator Superfamily 14 322 2.4E-25 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS25355 d052ce96aa1cd407e0896d25d466c037 384 SUPERFAMILY SSF103473 6 378 1.7E-50 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS25355 d052ce96aa1cd407e0896d25d466c037 384 Gene3D G3DSA:1.20.1250.20 195 381 3.0E-14 T 28-03-2018 AM393_RS19420 8c7314985b76db45d78732e588ea0658 187 Gene3D G3DSA:1.10.357.10 1 187 1.7E-33 T 28-03-2018 AM393_RS19420 8c7314985b76db45d78732e588ea0658 187 SUPERFAMILY SSF46689 2 79 4.93E-15 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS19420 8c7314985b76db45d78732e588ea0658 187 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 60 8.5E-10 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM393_RS08050 a13cb03ecb3029633149b765fad9d9d0 64 SUPERFAMILY SSF47598 15 60 3.69E-8 T 28-03-2018 IPR010985 Ribbon-helix-helix GO:0006355 AM393_RS08050 a13cb03ecb3029633149b765fad9d9d0 64 Gene3D G3DSA:1.10.1220.10 3 60 1.1E-11 T 28-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 AM393_RS29060 0737c7343f2002efc5736285cb8e73b8 334 Pfam PF01548 Transposase 7 147 9.3E-19 T 28-03-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 AM393_RS29060 0737c7343f2002efc5736285cb8e73b8 334 Pfam PF02371 Transposase IS116/IS110/IS902 family 210 286 9.6E-20 T 28-03-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 AM393_RS08410 ca4eaf9f80c9857dd99728e9beab7be3 66 Pfam PF09526 Probable metal-binding protein (DUF2387) 4 58 5.8E-19 T 28-03-2018 IPR012658 Conserved hypothetical protein CHP02443 AM393_RS08410 ca4eaf9f80c9857dd99728e9beab7be3 66 TIGRFAM TIGR02443 TIGR02443: conserved hypothetical protein 3 60 1.9E-31 T 28-03-2018 IPR012658 Conserved hypothetical protein CHP02443 AM393_RS08410 ca4eaf9f80c9857dd99728e9beab7be3 66 Gene3D G3DSA:2.20.25.10 4 50 4.0E-4 T 28-03-2018 AM393_RS27700 bd9858c80f35df4a138bc8c909a17639 322 Pfam PF10463 Peptidase U49 67 284 5.4E-46 T 28-03-2018 IPR019504 Peptidase U49, Lit peptidase AM393_RS04205 de7fbb17bf207e27baae15b5f7219c45 201 Pfam PF02525 Flavodoxin-like fold 3 196 6.2E-41 T 28-03-2018 IPR003680 Flavodoxin-like fold AM393_RS04205 de7fbb17bf207e27baae15b5f7219c45 201 Gene3D G3DSA:3.40.50.360 2 200 5.5E-37 T 28-03-2018 IPR029039 Flavoprotein-like domain AM393_RS04205 de7fbb17bf207e27baae15b5f7219c45 201 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 198 27.848 T 28-03-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 AM393_RS04205 de7fbb17bf207e27baae15b5f7219c45 201 SUPERFAMILY SSF52218 1 197 2.17E-46 T 28-03-2018 IPR029039 Flavoprotein-like domain AM393_RS15825 f15d7e5414690f4e6540bfecd6e21b85 245 ProDom PD037484 CAPSID DETERMINATION SIZE HEAD GLYCOPROTEIN SID MORPHOGENESIS CP-933I ENCODED LATE 1 244 4.0E-72 T 28-03-2018 AM393_RS24330 301b7ebbfbfcf2d4f1e3394e2fc8e7b4 128 Pfam PF11533 Protein of unknown function (DUF3225) 6 128 1.0E-60 T 28-03-2018 IPR024507 Protein of unknown function DUF3225 AM393_RS24330 301b7ebbfbfcf2d4f1e3394e2fc8e7b4 128 Gene3D G3DSA:3.10.450.50 4 128 6.4E-23 T 28-03-2018 AM393_RS24330 301b7ebbfbfcf2d4f1e3394e2fc8e7b4 128 SUPERFAMILY SSF54427 6 128 3.56E-39 T 28-03-2018 IPR032710 NTF2-like domain AM393_RS14625 e28d14a550e75882706cf147e2d34771 232 Pfam PF12431 Transcriptional regulator 135 162 4.0E-5 T 28-03-2018 IPR028141 Transcriptional regulator AM393_RS14625 e28d14a550e75882706cf147e2d34771 232 Gene3D G3DSA:3.40.50.2300 2 227 5.8E-24 T 28-03-2018 AM393_RS14625 e28d14a550e75882706cf147e2d34771 232 PIRSF PIRSF006171 4 231 1.9E-63 T 28-03-2018 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0001071|GO:0003677|GO:0005737|GO:0009605 AM393_RS14625 e28d14a550e75882706cf147e2d34771 232 SUPERFAMILY SSF52172 7 145 1.99E-26 T 28-03-2018 IPR011006 CheY-like superfamily AM393_RS14625 e28d14a550e75882706cf147e2d34771 232 SMART SM00448 6 119 6.5E-15 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM393_RS14625 e28d14a550e75882706cf147e2d34771 232 Pfam PF00072 Response regulator receiver domain 8 119 2.9E-17 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM393_RS22765 59a8f500fb35e0630264d9471e0613ce 332 Pfam PF00248 Aldo/keto reductase family 16 311 4.5E-78 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM393_RS22765 59a8f500fb35e0630264d9471e0613ce 332 Gene3D G3DSA:3.20.20.100 1 329 3.1E-106 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM393_RS22765 59a8f500fb35e0630264d9471e0613ce 332 SUPERFAMILY SSF51430 1 312 3.14E-102 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM393_RS20280 df2087bee73523bd06f1f8db10334c1f 93 PRINTS PR00112 Acylphosphatase signature 5 20 5.7E-6 T 28-03-2018 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 AM393_RS20280 df2087bee73523bd06f1f8db10334c1f 93 PRINTS PR00112 Acylphosphatase signature 26 51 5.7E-6 T 28-03-2018 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 AM393_RS20280 df2087bee73523bd06f1f8db10334c1f 93 PRINTS PR00112 Acylphosphatase signature 61 81 5.7E-6 T 28-03-2018 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 AM393_RS20280 df2087bee73523bd06f1f8db10334c1f 93 Gene3D G3DSA:3.30.70.100 2 93 2.6E-28 T 28-03-2018 AM393_RS20280 df2087bee73523bd06f1f8db10334c1f 93 Hamap MF_01450 Acylphosphatase [yccX]. 2 92 30.695 T 28-03-2018 IPR028627 Acylphosphatase, bacteria GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 AM393_RS20280 df2087bee73523bd06f1f8db10334c1f 93 ProSitePatterns PS00150 Acylphosphatase signature 1. 10 20 - T 28-03-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 AM393_RS20280 df2087bee73523bd06f1f8db10334c1f 93 SUPERFAMILY SSF54975 4 92 3.71E-29 T 28-03-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 AM393_RS20280 df2087bee73523bd06f1f8db10334c1f 93 Pfam PF00708 Acylphosphatase 8 91 3.2E-24 T 28-03-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 AM393_RS20280 df2087bee73523bd06f1f8db10334c1f 93 ProSitePatterns PS00151 Acylphosphatase signature 2. 34 50 - T 28-03-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 AM393_RS11585 d9a7af9bb040562252d72fe506a36579 443 Hamap MF_01279 Xaa-Pro dipeptidase [pepQ]. 1 443 57.664 T 28-03-2018 IPR022846 Xaa-Pro dipeptidase GO:0016795 AM393_RS11585 d9a7af9bb040562252d72fe506a36579 443 SUPERFAMILY SSF55920 163 438 7.07E-55 T 28-03-2018 IPR000994 Peptidase M24 AM393_RS11585 d9a7af9bb040562252d72fe506a36579 443 Gene3D G3DSA:3.90.230.10 160 442 3.0E-52 T 28-03-2018 AM393_RS11585 d9a7af9bb040562252d72fe506a36579 443 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 335 347 - T 28-03-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site AM393_RS11585 d9a7af9bb040562252d72fe506a36579 443 Pfam PF00557 Metallopeptidase family M24 168 430 4.7E-44 T 28-03-2018 IPR000994 Peptidase M24 AM393_RS12415 5c813cd20a0ce742075a71ec47355bbf 282 PIRSF PIRSF011468 1 282 8.2E-169 T 28-03-2018 IPR010306 Alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase GO:0016829|GO:0019700|GO:0051539 KEGG: 00440+4.7.1.1|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 AM393_RS12415 5c813cd20a0ce742075a71ec47355bbf 282 Pfam PF06007 Phosphonate metabolism protein PhnJ 7 277 1.9E-149 T 28-03-2018 IPR010306 Alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase GO:0016829|GO:0019700|GO:0051539 KEGG: 00440+4.7.1.1|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 AM393_RS16695 cdaa2ceaa6b2871a4f4aac68b87d6130 124 Pfam PF10757 Biofilm formation regulator YbaJ 1 116 1.0E-62 T 28-03-2018 IPR019693 Biofilm formation regulator YbaJ AM393_RS11795 b1f91f3cb0878f8ae989fa1268481249 223 Hamap MF_00801 Endonuclease V [nfi]. 2 216 34.2 T 28-03-2018 IPR007581 Endonuclease V GO:0004519|GO:0006281 AM393_RS11795 b1f91f3cb0878f8ae989fa1268481249 223 Pfam PF04493 Endonuclease V 12 206 8.7E-72 T 28-03-2018 IPR007581 Endonuclease V GO:0004519|GO:0006281 AM393_RS19205 d90fb8a2292daadc26827f77b5ff1fdd 240 SUPERFAMILY SSF52540 1 235 8.25E-81 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS19205 d90fb8a2292daadc26827f77b5ff1fdd 240 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS19205 d90fb8a2292daadc26827f77b5ff1fdd 240 PIRSF PIRSF039085 1 240 1.3E-110 T 28-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 AM393_RS19205 d90fb8a2292daadc26827f77b5ff1fdd 240 Gene3D G3DSA:3.40.50.300 1 240 1.9E-76 T 28-03-2018 AM393_RS19205 d90fb8a2292daadc26827f77b5ff1fdd 240 SMART SM00382 26 213 1.2E-15 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS19205 d90fb8a2292daadc26827f77b5ff1fdd 240 Pfam PF00005 ABC transporter 17 165 2.6E-37 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS06535 5a6c0d49f6afd45626e8801fbe978ba8 251 Gene3D G3DSA:3.90.1590.10 6 124 0.0012 T 28-03-2018 AM393_RS06535 5a6c0d49f6afd45626e8801fbe978ba8 251 Pfam PF10083 Uncharacterized protein conserved in bacteria (DUF2321) 4 83 2.9E-27 T 28-03-2018 IPR016891 Protein of unknown function DUF2321 AM393_RS18980 fe6a0678b86eea3c5f7d6d4890b82099 158 Gene3D G3DSA:3.90.280.10 1 158 9.5E-52 T 28-03-2018 IPR008914 Phosphatidylethanolamine-binding protein AM393_RS18980 fe6a0678b86eea3c5f7d6d4890b82099 158 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 18 157 4.6E-57 T 28-03-2018 IPR005247 YbhB/YbcL AM393_RS18980 fe6a0678b86eea3c5f7d6d4890b82099 158 SUPERFAMILY SSF49777 1 157 3.79E-53 T 28-03-2018 IPR008914 Phosphatidylethanolamine-binding protein AM393_RS18980 fe6a0678b86eea3c5f7d6d4890b82099 158 Pfam PF01161 Phosphatidylethanolamine-binding protein 14 157 7.9E-39 T 28-03-2018 IPR008914 Phosphatidylethanolamine-binding protein AM393_RS19265 3a4775dc7a600b933c2f3358193a0985 304 Pfam PF03734 L,D-transpeptidase catalytic domain 99 229 7.0E-17 T 28-03-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 AM393_RS19265 3a4775dc7a600b933c2f3358193a0985 304 Gene3D G3DSA:2.40.440.10 92 231 8.6E-28 T 28-03-2018 AM393_RS19265 3a4775dc7a600b933c2f3358193a0985 304 SUPERFAMILY SSF141523 175 231 3.53E-26 T 28-03-2018 AM393_RS19265 3a4775dc7a600b933c2f3358193a0985 304 SUPERFAMILY SSF141523 97 147 3.53E-26 T 28-03-2018 AM393_RS03025 a383981299b64ba66e93f2821a1c23fc 119 Pfam PF10697 Protein of unknown function (DUF2502) 23 101 9.7E-17 T 28-03-2018 IPR019638 Protein of unknown function DUF2502 AM393_RS13000 3b801dbb88d5a353da713caa67c3a39a 68 ProDom PD055267 YTFK Y0656 CYTOPLASMIC VP2585 VV0426 ESCHERICHIA S4534 VC2473 YPO3527 COLI 1 63 1.0E-29 T 28-03-2018 IPR009491 Protein of unknown function DUF1107 AM393_RS13000 3b801dbb88d5a353da713caa67c3a39a 68 Pfam PF06526 Protein of unknown function (DUF1107) 1 63 1.9E-29 T 28-03-2018 IPR009491 Protein of unknown function DUF1107 AM393_RS13000 3b801dbb88d5a353da713caa67c3a39a 68 Gene3D G3DSA:3.30.1910.10 1 62 7.1E-31 T 28-03-2018 AM393_RS02180 98ba8fe5ecf7b7d5806ea68e9e299fe1 385 Pfam PF04235 Protein of unknown function (DUF418) 215 374 2.7E-46 T 28-03-2018 IPR007349 Domain of unknown function DUF418 AM393_RS21860 78124dcf84f7f2942dbe259f39af7dd4 119 Pfam PF04024 PspC domain 8 64 2.8E-14 T 28-03-2018 IPR007168 Phage shock protein, PspC, N-terminal AM393_RS21860 78124dcf84f7f2942dbe259f39af7dd4 119 TIGRFAM TIGR02978 phageshock_pspC: phage shock protein C 7 119 4.7E-37 T 28-03-2018 IPR014320 Phage shock protein, PspC AM393_RS16040 56256817760c4b7b1de279b868b8c937 283 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 7 272 1.1E-66 T 28-03-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 AM393_RS16040 56256817760c4b7b1de279b868b8c937 283 SUPERFAMILY SSF51197 5 281 2.66E-98 T 28-03-2018 AM393_RS16040 56256817760c4b7b1de279b868b8c937 283 Gene3D G3DSA:3.60.130.10 1 283 1.7E-86 T 28-03-2018 AM393_RS01300 feb760a2bdc1e784a242c24cd55802cf 69 SUPERFAMILY SSF57716 35 68 1.43E-7 T 28-03-2018 AM393_RS01300 feb760a2bdc1e784a242c24cd55802cf 69 TIGRFAM TIGR02419 C4_traR_proteo: phage/conjugal plasmid C-4 type zinc finger protein, TraR family 3 65 7.3E-21 T 28-03-2018 IPR012783 Zinc finger, C4 DksA/TraR-type AM393_RS01300 feb760a2bdc1e784a242c24cd55802cf 69 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 32 66 4.2E-11 T 28-03-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 AM393_RS23730 35a3b85b2a44eac4f6cdb0243ff6ba2c 412 Gene3D G3DSA:1.20.1250.20 205 403 7.6E-16 T 28-03-2018 AM393_RS23730 35a3b85b2a44eac4f6cdb0243ff6ba2c 412 SUPERFAMILY SSF103473 14 392 3.27E-56 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS23730 35a3b85b2a44eac4f6cdb0243ff6ba2c 412 Gene3D G3DSA:1.20.1250.20 14 202 1.5E-27 T 28-03-2018 AM393_RS23730 35a3b85b2a44eac4f6cdb0243ff6ba2c 412 Pfam PF07690 Major Facilitator Superfamily 24 354 8.9E-33 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS17555 cbd47dc78763eacc83c5f4e8f05d8c5d 371 Gene3D G3DSA:3.40.800.20 32 367 5.1E-98 T 28-03-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AM393_RS17555 cbd47dc78763eacc83c5f4e8f05d8c5d 371 Pfam PF00850 Histone deacetylase domain 41 328 2.3E-73 T 28-03-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AM393_RS17555 cbd47dc78763eacc83c5f4e8f05d8c5d 371 PRINTS PR01270 Histone deacetylase superfamily signature 259 269 5.0E-15 T 28-03-2018 IPR000286 Histone deacetylase superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AM393_RS17555 cbd47dc78763eacc83c5f4e8f05d8c5d 371 PRINTS PR01270 Histone deacetylase superfamily signature 140 163 5.0E-15 T 28-03-2018 IPR000286 Histone deacetylase superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AM393_RS17555 cbd47dc78763eacc83c5f4e8f05d8c5d 371 PRINTS PR01270 Histone deacetylase superfamily signature 174 189 5.0E-15 T 28-03-2018 IPR000286 Histone deacetylase superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AM393_RS17555 cbd47dc78763eacc83c5f4e8f05d8c5d 371 SUPERFAMILY SSF52768 2 353 4.27E-101 T 28-03-2018 AM393_RS00575 73211d4495290df7a2939d5515bd9420 119 SUPERFAMILY SSF56349 26 113 2.77E-10 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AM393_RS00575 73211d4495290df7a2939d5515bd9420 119 Pfam PF00589 Phage integrase family 25 112 6.7E-9 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM393_RS00575 73211d4495290df7a2939d5515bd9420 119 Gene3D G3DSA:1.10.443.10 2 119 3.6E-8 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM393_RS23930 bab4acfa4d8f3fcd6d0cf1551e5f6ad1 129 SUPERFAMILY SSF54593 5 126 1.51E-26 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM393_RS23930 bab4acfa4d8f3fcd6d0cf1551e5f6ad1 129 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 8 124 3.1E-12 T 28-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AM393_RS23930 bab4acfa4d8f3fcd6d0cf1551e5f6ad1 129 Gene3D G3DSA:3.10.180.10 3 124 5.4E-27 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM393_RS23930 bab4acfa4d8f3fcd6d0cf1551e5f6ad1 129 ProSitePatterns PS00934 Glyoxalase I signature 1. 10 30 - T 28-03-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 AM393_RS10810 caa1e7f23df1840abb6f5e90df7cc7e6 455 Pfam PF03611 PTS system sugar-specific permease component 12 406 1.7E-119 T 28-03-2018 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 AM393_RS21160 248f9b0f9ab08407c2e7645579fe2905 148 Hamap MF_01874 UPF0756 membrane protein YeaL [yeaL]. 3 148 18.66 T 28-03-2018 IPR007382 Uncharacterised protein family UPF0756, transmembrame AM393_RS21160 248f9b0f9ab08407c2e7645579fe2905 148 Pfam PF04284 Protein of unknown function (DUF441) 7 145 3.1E-46 T 28-03-2018 IPR007382 Uncharacterised protein family UPF0756, transmembrame AM393_RS21160 248f9b0f9ab08407c2e7645579fe2905 148 ProDom PD021096 MEMBRANE YEAL PRECURSOR SIGNAL PROTEIN TRANSMEMBRANE YTWI HI1074 INTEGRAL SPANNING 19 130 9.0E-36 T 28-03-2018 IPR007382 Uncharacterised protein family UPF0756, transmembrame AM393_RS06350 0876eee43000553132098c03d8d4ab5f 83 SUPERFAMILY SSF47413 4 70 2.53E-29 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM393_RS06350 0876eee43000553132098c03d8d4ab5f 83 Gene3D G3DSA:1.10.260.40 1 71 1.9E-13 T 28-03-2018 AM393_RS06350 0876eee43000553132098c03d8d4ab5f 83 Pfam PF13693 Winged helix-turn-helix DNA-binding 5 77 1.3E-34 T 28-03-2018 AM393_RS13310 2810d95c98acf57df62c16912e4e3e87 365 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 2 348 3.4E-117 T 28-03-2018 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 AM393_RS13310 2810d95c98acf57df62c16912e4e3e87 365 Pfam PF03739 Predicted permease YjgP/YjgQ family 5 345 5.1E-73 T 28-03-2018 IPR005495 Permease LptG/LptF-related GO:0016021 AM393_RS14190 43f9611d4ce89e6bbcf5b42f36ca5d92 206 SMART SM00749 144 205 3.4E-7 T 28-03-2018 IPR014004 Transport-associated and nodulation domain, bacteria AM393_RS14190 43f9611d4ce89e6bbcf5b42f36ca5d92 206 SMART SM00749 62 125 5.7E-7 T 28-03-2018 IPR014004 Transport-associated and nodulation domain, bacteria AM393_RS14190 43f9611d4ce89e6bbcf5b42f36ca5d92 206 Pfam PF04972 BON domain 57 123 8.1E-19 T 28-03-2018 IPR007055 BON domain AM393_RS14190 43f9611d4ce89e6bbcf5b42f36ca5d92 206 Pfam PF04972 BON domain 140 206 1.5E-19 T 28-03-2018 IPR007055 BON domain AM393_RS01350 63c6e40771339b1702265a97abd5b706 302 TIGRFAM TIGR02781 VirB9: P-type conjugative transfer protein VirB9 5 278 8.0E-81 T 28-03-2018 IPR014148 P-type conjugative transfer protein VirB9 AM393_RS01350 63c6e40771339b1702265a97abd5b706 302 Pfam PF03524 Conjugal transfer protein 31 275 1.8E-54 T 28-03-2018 IPR010258 Conjugal transfer, TrbG/VirB9/CagX AM393_RS26720 5c09df973983cb49de316ac8866c60c3 236 Gene3D G3DSA:1.10.3480.10 4 183 1.9E-31 T 28-03-2018 IPR020945 DMSO/Nitrate reductase chaperone AM393_RS26720 5c09df973983cb49de316ac8866c60c3 236 SUPERFAMILY SSF89155 5 163 2.3E-31 T 28-03-2018 IPR020945 DMSO/Nitrate reductase chaperone AM393_RS26720 5c09df973983cb49de316ac8866c60c3 236 Pfam PF02613 Nitrate reductase delta subunit 36 152 4.3E-11 T 28-03-2018 IPR020945 DMSO/Nitrate reductase chaperone AM393_RS26720 5c09df973983cb49de316ac8866c60c3 236 TIGRFAM TIGR00684 narJ: nitrate reductase molybdenum cofactor assembly chaperone 8 161 5.2E-55 T 28-03-2018 IPR003765 Nitrate reductase chaperone, NarJ GO:0051082|GO:0051131 AM393_RS09270 faae8b6ad628aeb29bb183a234064c54 339 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 336 6.1E-46 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS09270 faae8b6ad628aeb29bb183a234064c54 339 SUPERFAMILY SSF161098 89 160 1.44E-21 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS09270 faae8b6ad628aeb29bb183a234064c54 339 SUPERFAMILY SSF161098 200 322 1.44E-21 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS09270 faae8b6ad628aeb29bb183a234064c54 339 Gene3D G3DSA:1.10.3720.10 3 325 1.5E-47 T 28-03-2018 AM393_RS20705 588e82812a1a6a300840cfa2ec5c8c2e 404 Gene3D G3DSA:1.20.1250.20 2 191 1.7E-16 T 28-03-2018 AM393_RS20705 588e82812a1a6a300840cfa2ec5c8c2e 404 Gene3D G3DSA:1.20.1250.20 200 403 1.1E-16 T 28-03-2018 AM393_RS20705 588e82812a1a6a300840cfa2ec5c8c2e 404 Pfam PF07690 Major Facilitator Superfamily 18 326 2.9E-25 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS20705 588e82812a1a6a300840cfa2ec5c8c2e 404 SUPERFAMILY SSF103473 4 390 1.7E-46 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS25125 9ba992419f626c0d115181c297f913d2 149 Pfam PF04657 Putative inner membrane exporter, YdcZ 7 143 2.8E-19 T 28-03-2018 IPR006750 Putative inner membrane exporter, YdcZ AM393_RS23435 cd8b5bfcfab31d9fd94a41d96bba45d8 132 SMART SM00450 30 127 0.002 T 28-03-2018 IPR001763 Rhodanese-like domain AM393_RS23435 cd8b5bfcfab31d9fd94a41d96bba45d8 132 Pfam PF00581 Rhodanese-like domain 51 123 8.7E-6 T 28-03-2018 IPR001763 Rhodanese-like domain AM393_RS23435 cd8b5bfcfab31d9fd94a41d96bba45d8 132 SUPERFAMILY SSF52821 28 131 4.45E-18 T 28-03-2018 IPR001763 Rhodanese-like domain AM393_RS23435 cd8b5bfcfab31d9fd94a41d96bba45d8 132 Gene3D G3DSA:3.40.250.10 10 132 1.8E-16 T 28-03-2018 IPR001763 Rhodanese-like domain AM393_RS10125 bcb078c51b81024fcbbe4d200206841e 286 Gene3D G3DSA:1.10.3720.10 16 286 2.5E-45 T 28-03-2018 AM393_RS10125 bcb078c51b81024fcbbe4d200206841e 286 TIGRFAM TIGR03226 PhnU: 2-aminoethylphosphonate ABC transporter, permease protein 7 286 3.5E-137 T 28-03-2018 IPR017636 2-aminoethylphosphonate ABC transporter system, permease protein phnU GO:0016020|GO:0033223 AM393_RS10125 bcb078c51b81024fcbbe4d200206841e 286 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 83 281 2.0E-15 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS10125 bcb078c51b81024fcbbe4d200206841e 286 SUPERFAMILY SSF161098 12 277 4.95E-51 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS21765 6520dfacbee9d850c3e86ef9bf62184a 59 Hamap MF_01641 UPF0509 protein YciZ [yciZ]. 1 59 23.591 T 28-03-2018 IPR020887 Uncharacterised protein family UPF0509 AM393_RS15655 79593704a36e8836995500ed3a1caa45 150 Gene3D G3DSA:3.40.630.30 1 150 4.1E-23 T 28-03-2018 AM393_RS15655 79593704a36e8836995500ed3a1caa45 150 Pfam PF13673 Acetyltransferase (GNAT) domain 28 144 2.1E-17 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AM393_RS15655 79593704a36e8836995500ed3a1caa45 150 SUPERFAMILY SSF55729 1 146 7.27E-28 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM393_RS06700 61b7c2325e77e6a6c797fc534a344f8f 219 Pfam PF09335 SNARE associated Golgi protein 48 173 5.4E-19 T 28-03-2018 IPR032816 SNARE associated Golgi protein AM393_RS16965 877db75779dc155e0d6cb2d3993f515f 226 Gene3D G3DSA:3.90.320.10 2 226 7.9E-49 T 28-03-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal GO:0003677|GO:0004518 AM393_RS16965 877db75779dc155e0d6cb2d3993f515f 226 SUPERFAMILY SSF52980 8 225 4.93E-66 T 28-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AM393_RS16965 877db75779dc155e0d6cb2d3993f515f 226 Pfam PF09588 YqaJ-like viral recombinase domain 24 167 1.9E-26 T 28-03-2018 IPR019080 YqaJ viral recombinase AM393_RS26800 38c4891a79af60d900681de48f78e4af 76 Pfam PF06150 ChaB 9 75 7.5E-28 T 28-03-2018 IPR009317 ChaB AM393_RS26800 38c4891a79af60d900681de48f78e4af 76 SUPERFAMILY SSF140376 2 75 1.15E-28 T 28-03-2018 AM393_RS04600 95dd617d0f677c0b0735f4a80e5a1542 373 Pfam PF01924 Hydrogenase formation hypA family 20 367 1.4E-150 T 28-03-2018 IPR002780 Hydrogenase formation HypD protein GO:0046872 AM393_RS04600 95dd617d0f677c0b0735f4a80e5a1542 373 TIGRFAM TIGR00075 hypD: hydrogenase expression/formation protein HypD 2 371 6.9E-169 T 28-03-2018 IPR002780 Hydrogenase formation HypD protein GO:0046872 AM393_RS04600 95dd617d0f677c0b0735f4a80e5a1542 373 PIRSF PIRSF005622 1 372 2.1E-155 T 28-03-2018 IPR002780 Hydrogenase formation HypD protein GO:0046872 AM393_RS22060 dae4ca9f564b5892a5ff228cc13eea45 73 Pfam PF01381 Helix-turn-helix 4 52 3.0E-10 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM393_RS22060 dae4ca9f564b5892a5ff228cc13eea45 73 SUPERFAMILY SSF47413 4 52 4.29E-11 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM393_RS22060 dae4ca9f564b5892a5ff228cc13eea45 73 Gene3D G3DSA:1.10.260.40 1 73 9.8E-14 T 28-03-2018 AM393_RS22060 dae4ca9f564b5892a5ff228cc13eea45 73 SMART SM00530 3 63 2.5E-8 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM393_RS12840 929d80398905ea2e8a9a86014bd528e3 141 Pfam PF02082 Transcriptional regulator 2 82 8.5E-24 T 28-03-2018 IPR000944 Transcription regulator Rrf2-type AM393_RS12840 929d80398905ea2e8a9a86014bd528e3 141 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 28-03-2018 IPR030489 Transcription regulator Rrf2-type, conserved site AM393_RS12840 929d80398905ea2e8a9a86014bd528e3 141 Gene3D G3DSA:1.10.10.10 1 136 1.2E-30 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS12840 929d80398905ea2e8a9a86014bd528e3 141 Hamap MF_01177 HTH-type transcriptional repressor NsrR [nsrR]. 1 141 45.601 T 28-03-2018 IPR023761 Transcriptional repressor HTH, NsrR GO:0045892 AM393_RS12840 929d80398905ea2e8a9a86014bd528e3 141 SUPERFAMILY SSF46785 2 131 3.78E-34 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS12840 929d80398905ea2e8a9a86014bd528e3 141 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 2 128 8.3E-37 T 28-03-2018 IPR000944 Transcription regulator Rrf2-type AM393_RS27825 64f0b3cb5c5b91e846481954c83414a9 412 Gene3D G3DSA:1.20.1250.20 204 392 8.8E-14 T 28-03-2018 AM393_RS27825 64f0b3cb5c5b91e846481954c83414a9 412 Gene3D G3DSA:1.20.1250.20 1 203 7.3E-14 T 28-03-2018 AM393_RS27825 64f0b3cb5c5b91e846481954c83414a9 412 SUPERFAMILY SSF103473 1 392 3.4E-33 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS03175 36e6a71b232025bdce7b63e3c226e7d6 277 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 5 269 2.8E-115 T 28-03-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 AM393_RS03175 36e6a71b232025bdce7b63e3c226e7d6 277 SUPERFAMILY SSF161098 16 264 3.74E-58 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS03175 36e6a71b232025bdce7b63e3c226e7d6 277 TIGRFAM TIGR02139 permease_CysT: sulfate ABC transporter, permease protein CysT 9 271 4.2E-114 T 28-03-2018 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 AM393_RS03175 36e6a71b232025bdce7b63e3c226e7d6 277 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 76 274 4.2E-34 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS03175 36e6a71b232025bdce7b63e3c226e7d6 277 Gene3D G3DSA:1.10.3720.10 12 275 3.6E-48 T 28-03-2018 AM393_RS25060 cd25178a72e6a622d7cc9f0e591800ca 183 SUPERFAMILY SSF52540 127 173 3.76E-16 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS25060 cd25178a72e6a622d7cc9f0e591800ca 183 SUPERFAMILY SSF52540 1 98 3.76E-16 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS25060 cd25178a72e6a622d7cc9f0e591800ca 183 Gene3D G3DSA:3.40.50.300 1 180 3.2E-15 T 28-03-2018 AM393_RS22490 7ca62f96fb1275bc441d65c37ca46e2b 222 Gene3D G3DSA:1.10.3720.10 8 222 3.2E-33 T 28-03-2018 AM393_RS22490 7ca62f96fb1275bc441d65c37ca46e2b 222 SUPERFAMILY SSF161098 12 220 1.83E-42 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS22490 7ca62f96fb1275bc441d65c37ca46e2b 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 36 221 1.7E-21 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS28785 f349b9b90873e7128c2fd5a29157e5e5 170 Gene3D G3DSA:3.40.1350.10 9 130 9.4E-15 T 28-03-2018 AM393_RS28785 f349b9b90873e7128c2fd5a29157e5e5 170 SUPERFAMILY SSF52980 23 98 3.49E-12 T 28-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AM393_RS28785 f349b9b90873e7128c2fd5a29157e5e5 170 Pfam PF04471 Restriction endonuclease 19 129 5.1E-19 T 28-03-2018 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 AM393_RS03435 5579fbf677447d0cd0ef4e292517f412 477 PRINTS PR00131 Glycosyl hydrolase family 1 signature 413 430 1.3E-16 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AM393_RS03435 5579fbf677447d0cd0ef4e292517f412 477 PRINTS PR00131 Glycosyl hydrolase family 1 signature 304 318 1.3E-16 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AM393_RS03435 5579fbf677447d0cd0ef4e292517f412 477 PRINTS PR00131 Glycosyl hydrolase family 1 signature 438 450 1.3E-16 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AM393_RS03435 5579fbf677447d0cd0ef4e292517f412 477 PRINTS PR00131 Glycosyl hydrolase family 1 signature 391 402 1.3E-16 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AM393_RS03435 5579fbf677447d0cd0ef4e292517f412 477 PRINTS PR00131 Glycosyl hydrolase family 1 signature 370 378 1.3E-16 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AM393_RS03435 5579fbf677447d0cd0ef4e292517f412 477 Gene3D G3DSA:3.20.20.80 1 477 2.4E-154 T 28-03-2018 AM393_RS03435 5579fbf677447d0cd0ef4e292517f412 477 SUPERFAMILY SSF51445 2 469 5.6E-165 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily AM393_RS03435 5579fbf677447d0cd0ef4e292517f412 477 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 370 378 - T 28-03-2018 IPR018120 Glycoside hydrolase family 1, active site AM393_RS03435 5579fbf677447d0cd0ef4e292517f412 477 Pfam PF00232 Glycosyl hydrolase family 1 4 473 1.5E-132 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AM393_RS03435 5579fbf677447d0cd0ef4e292517f412 477 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 8 22 - T 28-03-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site AM393_RS07265 65e7a610e7b5a690d7016358aeac7b86 136 Pfam PF07813 LTXXQ motif family protein 34 128 5.5E-6 T 28-03-2018 IPR012899 LTXXQ motif family protein GO:0042597 AM393_RS23775 29dc9fe7b672a85a1670b0e03825d753 440 Pfam PF13657 HipA N-terminal domain 6 103 8.0E-25 T 28-03-2018 IPR017508 HipA, N-terminal subdomain 1 AM393_RS23775 29dc9fe7b672a85a1670b0e03825d753 440 Pfam PF07804 HipA-like C-terminal domain 149 402 1.8E-51 T 28-03-2018 IPR012893 HipA-like, C-terminal AM393_RS23775 29dc9fe7b672a85a1670b0e03825d753 440 TIGRFAM TIGR03071 couple_hipA: HipA N-terminal domain 4 103 1.3E-30 T 28-03-2018 IPR017508 HipA, N-terminal subdomain 1 AM393_RS01595 7cc7fe9d852c1040484e268f35fdb598 157 Hamap MF_01896 DNA gyrase inhibitor [sbmC]. 1 155 39.83 T 28-03-2018 IPR024911 DNA gyrase inhibitor GyrI GO:0008657 AM393_RS01595 7cc7fe9d852c1040484e268f35fdb598 157 Pfam PF06445 GyrI-like small molecule binding domain 1 152 2.2E-20 T 28-03-2018 IPR029442 GyrI-like small molecule binding domain AM393_RS01595 7cc7fe9d852c1040484e268f35fdb598 157 SUPERFAMILY SSF55136 1 153 2.88E-34 T 28-03-2018 AM393_RS01595 7cc7fe9d852c1040484e268f35fdb598 157 SMART SM00871 1 153 2.6E-26 T 28-03-2018 IPR010499 Bacterial transcription activator, effector binding AM393_RS01595 7cc7fe9d852c1040484e268f35fdb598 157 Gene3D G3DSA:3.20.80.10 1 156 6.1E-24 T 28-03-2018 IPR011256 Regulatory factor, effector binding domain AM393_RS23770 790dbdd4453c3d690b4acc37538de070 88 SUPERFAMILY SSF47413 6 69 3.49E-16 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM393_RS23770 790dbdd4453c3d690b4acc37538de070 88 Pfam PF01381 Helix-turn-helix 16 65 6.9E-12 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM393_RS23770 790dbdd4453c3d690b4acc37538de070 88 Gene3D G3DSA:3.30.1190.10 34 84 7.5E-10 T 28-03-2018 AM393_RS23770 790dbdd4453c3d690b4acc37538de070 88 SMART SM00530 15 70 8.0E-9 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM393_RS23770 790dbdd4453c3d690b4acc37538de070 88 Gene3D G3DSA:1.10.10.10 7 33 0.0031 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS02430 d15119315fcae26c7bdf11ba09bc0a39 369 Pfam PF01594 AI-2E family transporter 11 339 3.6E-50 T 28-03-2018 IPR002549 Transmembrane protein TqsA-like AM393_RS19930 caba6b6ab772d801597a2fb6313b2504 287 Pfam PF04976 DMSO reductase anchor subunit (DmsC) 1 277 3.4E-107 T 28-03-2018 IPR007059 DMSO reductase anchor subunit (DmsC) GO:0016021|GO:0019645 AM393_RS19930 caba6b6ab772d801597a2fb6313b2504 287 Gene3D G3DSA:1.20.1630.10 2 285 8.1E-42 T 28-03-2018 AM393_RS14865 f867ec0b6af4633cd70317d1ad22cb61 276 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 26 255 25.882 T 28-03-2018 IPR026579 Cell division protein FtsQ GO:0090529 AM393_RS14865 f867ec0b6af4633cd70317d1ad22cb61 276 Pfam PF03799 Cell division protein FtsQ 130 247 9.6E-27 T 28-03-2018 IPR005548 Cell division protein FtsQ/DivIB AM393_RS14865 f867ec0b6af4633cd70317d1ad22cb61 276 Pfam PF08478 POTRA domain, FtsQ-type 57 126 4.1E-21 T 28-03-2018 IPR013685 POTRA domain, FtsQ-type AM393_RS05030 9040ee0f229ab61432ee25a00ed3fca2 390 SUPERFAMILY SSF51679 9 355 1.96E-99 T 28-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AM393_RS05030 9040ee0f229ab61432ee25a00ed3fca2 390 Gene3D G3DSA:3.20.20.30 8 367 4.6E-94 T 28-03-2018 AM393_RS05030 9040ee0f229ab61432ee25a00ed3fca2 390 TIGRFAM TIGR03565 alk_sulf_monoox: alkanesulfonate monooxygenase, FMNH(2)-dependent 10 355 2.7E-187 T 28-03-2018 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent GO:0008726|GO:0055114 KEGG: 00920+1.14.14.5 AM393_RS05030 9040ee0f229ab61432ee25a00ed3fca2 390 Pfam PF00296 Luciferase-like monooxygenase 10 331 1.2E-89 T 28-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AM393_RS05030 9040ee0f229ab61432ee25a00ed3fca2 390 Hamap MF_01229 Alkanesulfonate monooxygenase [ssuD]. 10 386 69.17 T 28-03-2018 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent GO:0008726|GO:0055114 KEGG: 00920+1.14.14.5 AM393_RS17570 129196858c980c67d1e6bfc78bb9802e 121 Gene3D G3DSA:2.60.120.10 20 121 1.4E-11 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AM393_RS17570 129196858c980c67d1e6bfc78bb9802e 121 SUPERFAMILY SSF51182 25 115 3.04E-18 T 28-03-2018 IPR011051 RmlC-like cupin domain AM393_RS17570 129196858c980c67d1e6bfc78bb9802e 121 Pfam PF05899 Protein of unknown function (DUF861) 41 114 1.1E-19 T 28-03-2018 IPR008579 Domain of unknown function DUF861, cupin-3 KEGG: 00230+3.5.3.26|MetaCyc: PWY-5692|MetaCyc: PWY-5698 AM393_RS26910 e82be30963006440c0a7f382ae908e97 348 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 10 308 7.5E-68 T 28-03-2018 IPR010732 Type VI secretion, TssG-like AM393_RS26910 e82be30963006440c0a7f382ae908e97 348 Pfam PF06996 Type VI secretion, TssG 10 308 3.1E-76 T 28-03-2018 IPR010732 Type VI secretion, TssG-like AM393_RS07215 41b63e64bda290edc6693e463b711f91 127 Hamap MF_00904 Modulator protein MzrA [mzrA]. 2 116 28.027 T 28-03-2018 IPR026574 Modulator protein MzrA AM393_RS07215 41b63e64bda290edc6693e463b711f91 127 Pfam PF13721 SecD export protein N-terminal TM region 20 105 5.8E-13 T 28-03-2018 IPR027398 SecD export protein N-terminal TM domain AM393_RS19800 a90cd33bb93800780506fb96c3cbc991 144 Pfam PF07681 DoxX 20 98 9.8E-19 T 28-03-2018 IPR032808 DoxX family AM393_RS25460 ae7ccf98e22db96067b61971c4e62324 374 SUPERFAMILY SSF53067 66 111 4.01E-25 T 28-03-2018 AM393_RS25460 ae7ccf98e22db96067b61971c4e62324 374 SUPERFAMILY SSF53067 6 36 4.01E-25 T 28-03-2018 AM393_RS25460 ae7ccf98e22db96067b61971c4e62324 374 SUPERFAMILY SSF53067 143 341 4.01E-25 T 28-03-2018 AM393_RS25460 ae7ccf98e22db96067b61971c4e62324 374 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 4 367 42.016 T 28-03-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17 AM393_RS25460 ae7ccf98e22db96067b61971c4e62324 374 Gene3D G3DSA:3.30.420.40 3 186 6.9E-56 T 28-03-2018 AM393_RS25460 ae7ccf98e22db96067b61971c4e62324 374 Gene3D G3DSA:3.30.420.40 223 374 1.5E-29 T 28-03-2018 AM393_RS25460 ae7ccf98e22db96067b61971c4e62324 374 Pfam PF03702 Anhydro-N-acetylmuramic acid kinase 5 367 1.3E-172 T 28-03-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17 AM393_RS07655 ddec30faa302a601431cca590663fc16 328 Gene3D G3DSA:3.40.50.10490 9 204 3.6E-58 T 28-03-2018 AM393_RS07655 ddec30faa302a601431cca590663fc16 328 Gene3D G3DSA:3.10.580.10 205 326 1.0E-21 T 28-03-2018 AM393_RS07655 ddec30faa302a601431cca590663fc16 328 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 50 318 4.1E-125 T 28-03-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 AM393_RS07655 ddec30faa302a601431cca590663fc16 328 PIRSF PIRSF004692 1 328 4.4E-135 T 28-03-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 AM393_RS07655 ddec30faa302a601431cca590663fc16 328 Pfam PF01380 SIS domain 46 177 1.6E-33 T 28-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AM393_RS07655 ddec30faa302a601431cca590663fc16 328 Pfam PF00571 CBS domain 274 325 2.1E-6 T 28-03-2018 IPR000644 CBS domain AM393_RS07655 ddec30faa302a601431cca590663fc16 328 Pfam PF00571 CBS domain 206 261 7.4E-5 T 28-03-2018 IPR000644 CBS domain AM393_RS07655 ddec30faa302a601431cca590663fc16 328 SUPERFAMILY SSF53697 14 325 4.0E-70 T 28-03-2018 AM393_RS05435 256a7d46d9fba5488c965e1fc586cc8c 72 Pfam PF06004 Bacterial protein of unknown function (DUF903) 23 70 5.3E-24 T 28-03-2018 IPR010305 Protein of unknown function DUF903 AM393_RS05435 256a7d46d9fba5488c965e1fc586cc8c 72 SUPERFAMILY SSF50182 21 71 1.47E-18 T 28-03-2018 IPR010920 LSM domain AM393_RS05435 256a7d46d9fba5488c965e1fc586cc8c 72 Gene3D G3DSA:2.30.30.100 21 71 8.1E-27 T 28-03-2018 AM393_RS27850 92cca984befbd26425bb41b32564553d 359 Gene3D G3DSA:1.20.120.330 3 235 4.4E-8 T 28-03-2018 AM393_RS27850 92cca984befbd26425bb41b32564553d 359 Pfam PF13007 Transposase C of IS166 homeodomain 39 110 3.9E-12 T 28-03-2018 IPR024463 Transposase TnpC, homeodomain AM393_RS27850 92cca984befbd26425bb41b32564553d 359 Pfam PF13005 zinc-finger binding domain of transposase IS66 118 161 1.9E-12 T 28-03-2018 IPR024474 Zinc-finger binding domain of transposase IS66 AM393_RS27850 92cca984befbd26425bb41b32564553d 359 Pfam PF03050 Transposase IS66 family 176 358 5.1E-62 T 28-03-2018 IPR004291 Transposase, IS66 AM393_RS18960 da0b2a967210f566e80f171f53d5f07d 562 TIGRFAM TIGR01228 hutU: urocanate hydratase 10 553 1.4E-302 T 28-03-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AM393_RS18960 da0b2a967210f566e80f171f53d5f07d 562 ProSitePatterns PS01233 Urocanase signature. 441 456 - T 28-03-2018 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AM393_RS18960 da0b2a967210f566e80f171f53d5f07d 562 Hamap MF_00577 Urocanate hydratase [hutU]. 2 555 50.031 T 28-03-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AM393_RS18960 da0b2a967210f566e80f171f53d5f07d 562 Pfam PF17392 Urocanase C-terminal domain 351 545 6.4E-93 T 28-03-2018 IPR035401 Urocanase, C-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AM393_RS18960 da0b2a967210f566e80f171f53d5f07d 562 Pfam PF01175 Urocanase Rossmann-like domain 140 348 1.3E-86 T 28-03-2018 IPR035085 Urocanase, Rossmann-like domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AM393_RS18960 da0b2a967210f566e80f171f53d5f07d 562 PIRSF PIRSF001423 1 560 1.9E-294 T 28-03-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AM393_RS18960 da0b2a967210f566e80f171f53d5f07d 562 SUPERFAMILY SSF111326 7 554 1.01E-261 T 28-03-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AM393_RS18960 da0b2a967210f566e80f171f53d5f07d 562 Pfam PF17391 Urocanase N-terminal domain 11 137 2.3E-62 T 28-03-2018 IPR035400 Urocanase, N-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AM393_RS18960 da0b2a967210f566e80f171f53d5f07d 562 Gene3D G3DSA:3.40.1770.10 195 554 2.9E-165 T 28-03-2018 AM393_RS18960 da0b2a967210f566e80f171f53d5f07d 562 Gene3D G3DSA:3.40.1770.10 9 151 3.2E-29 T 28-03-2018 AM393_RS25085 dbcfe6db0dd088ca246117465cca0987 696 Pfam PF00593 TonB dependent receptor 246 691 4.5E-56 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM393_RS25085 dbcfe6db0dd088ca246117465cca0987 696 Gene3D G3DSA:2.170.130.10 13 153 4.4E-29 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM393_RS25085 dbcfe6db0dd088ca246117465cca0987 696 Pfam PF07715 TonB-dependent Receptor Plug Domain 36 147 7.6E-22 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM393_RS25085 dbcfe6db0dd088ca246117465cca0987 696 Gene3D G3DSA:2.40.170.20 155 692 5.1E-82 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM393_RS25085 dbcfe6db0dd088ca246117465cca0987 696 SUPERFAMILY SSF56935 15 693 3.14E-122 T 28-03-2018 AM393_RS13120 f70b5747852c3864b546755cc1c3677b 258 Pfam PF14188 Domain of unknown function (DUF4311) 25 237 4.2E-123 T 28-03-2018 IPR020042 Protein of unknown function DUF4311 AM393_RS13120 f70b5747852c3864b546755cc1c3677b 258 TIGRFAM TIGR03580 EF_0832: conserved hypothetical protein EF_0832/AHA_3913 2 258 1.7E-157 T 28-03-2018 IPR020042 Protein of unknown function DUF4311 AM393_RS23140 116cc49182fe5aa38bc3bf8f6037347e 99 Pfam PF06857 Malonate decarboxylase delta subunit (MdcD) 17 96 1.6E-20 T 28-03-2018 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein AM393_RS23140 116cc49182fe5aa38bc3bf8f6037347e 99 TIGRFAM TIGR03130 malonate_delta: malonate decarboxylase acyl carrier protein 2 95 4.7E-30 T 28-03-2018 IPR009662 Malonate decarboxylase delta subunit AM393_RS23140 116cc49182fe5aa38bc3bf8f6037347e 99 Hamap MF_00710 Malonate decarboxylase acyl carrier protein [mdcC]. 1 99 42.266 T 28-03-2018 IPR009662 Malonate decarboxylase delta subunit AM393_RS23140 116cc49182fe5aa38bc3bf8f6037347e 99 ProDom PD015450 MALONATE DECARBOXYLASE SUBUNIT DELTA ACYL CARRIER DECARBOXYLASE PLASMID DIRECT SEQUENCING 1 94 3.0E-48 T 28-03-2018 IPR009662 Malonate decarboxylase delta subunit AM393_RS22850 d7cc0c8a13416cd9888596d76424bc5b 172 Gene3D G3DSA:2.40.160.20 18 169 9.5E-5 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AM393_RS23465 34db23a92e935f985c7ee21afde0d068 232 SUPERFAMILY SSF52540 2 222 3.94E-61 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS23465 34db23a92e935f985c7ee21afde0d068 232 TIGRFAM TIGR03410 urea_trans_UrtE: urea ABC transporter, ATP-binding protein UrtE 2 232 1.9E-107 T 28-03-2018 IPR017780 ABC transporter, urea, ATP-binding protein, UrtE AM393_RS23465 34db23a92e935f985c7ee21afde0d068 232 Gene3D G3DSA:3.40.50.300 1 227 2.8E-58 T 28-03-2018 AM393_RS23465 34db23a92e935f985c7ee21afde0d068 232 Pfam PF00005 ABC transporter 17 161 5.6E-33 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS23465 34db23a92e935f985c7ee21afde0d068 232 SMART SM00382 26 211 1.2E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS00440 bc94df0dd55be4a23755a3bca016d9f3 581 Gene3D G3DSA:3.90.1310.10 29 228 1.4E-43 T 28-03-2018 AM393_RS00440 bc94df0dd55be4a23755a3bca016d9f3 581 Pfam PF00905 Penicillin binding protein transpeptidase domain 253 547 2.2E-74 T 28-03-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AM393_RS00440 bc94df0dd55be4a23755a3bca016d9f3 581 Gene3D G3DSA:3.40.710.10 229 578 9.9E-78 T 28-03-2018 AM393_RS00440 bc94df0dd55be4a23755a3bca016d9f3 581 SUPERFAMILY SSF56601 228 556 3.17E-85 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AM393_RS00440 bc94df0dd55be4a23755a3bca016d9f3 581 Pfam PF03717 Penicillin-binding Protein dimerisation domain 61 214 1.2E-16 T 28-03-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 AM393_RS00440 bc94df0dd55be4a23755a3bca016d9f3 581 SUPERFAMILY SSF56519 56 227 9.68E-44 T 28-03-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 AM393_RS19655 902029146ee7a45a99eb941a2395f71d 72 Pfam PF04606 Ogr/Delta-like zinc finger 4 49 1.2E-20 T 28-03-2018 IPR007684 Zinc finger, Ogr/Delta-type AM393_RS26735 a2e857cb82823674bd1cc46ddf9420bb 462 TIGRFAM TIGR00886 2A0108: nitrite transporter 36 418 1.7E-110 T 28-03-2018 IPR004737 Nitrate transporter GO:0015112|GO:0015113|GO:0015706|GO:0015707|GO:0016021 AM393_RS26735 a2e857cb82823674bd1cc46ddf9420bb 462 Gene3D G3DSA:1.20.1250.20 244 462 1.1E-21 T 28-03-2018 AM393_RS26735 a2e857cb82823674bd1cc46ddf9420bb 462 Pfam PF07690 Major Facilitator Superfamily 45 422 1.3E-14 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS26735 a2e857cb82823674bd1cc46ddf9420bb 462 Gene3D G3DSA:1.20.1250.20 16 241 1.4E-15 T 28-03-2018 AM393_RS26735 a2e857cb82823674bd1cc46ddf9420bb 462 SUPERFAMILY SSF103473 15 461 2.62E-38 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS27990 d2d31931e5029292af73244be0db0288 455 Pfam PF06122 Conjugative relaxosome accessory transposon protein 28 376 8.7E-116 T 28-03-2018 IPR010927 Type IV conjugative transfer system protein TraH AM393_RS00355 dad3178332373d030c776cc480f7e02b 193 TIGRFAM TIGR00752 slp: outer membrane lipoprotein, Slp family 10 187 2.9E-76 T 28-03-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 AM393_RS00355 dad3178332373d030c776cc480f7e02b 193 Pfam PF03843 Outer membrane lipoprotein Slp family 20 172 1.6E-48 T 28-03-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 AM393_RS00355 dad3178332373d030c776cc480f7e02b 193 PIRSF PIRSF004982 5 190 8.7E-53 T 28-03-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 AM393_RS14945 4e9386888a00a0368d95ff6601909f38 284 Pfam PF17113 Regulatory signalling modulator protein AmpE 1 284 6.1E-163 T 28-03-2018 IPR031347 Protein AmpE AM393_RS20935 1139fb4cf6b42d826c033b746c3278f3 373 SUPERFAMILY SSF51197 7 292 1.33E-74 T 28-03-2018 AM393_RS20935 1139fb4cf6b42d826c033b746c3278f3 373 SMART SM00558 92 215 8.8E-9 T 28-03-2018 IPR003347 JmjC domain AM393_RS20935 1139fb4cf6b42d826c033b746c3278f3 373 Gene3D G3DSA:2.60.120.650 3 208 5.8E-28 T 28-03-2018 AM393_RS20935 1139fb4cf6b42d826c033b746c3278f3 373 Pfam PF08007 Cupin superfamily protein 10 310 3.2E-104 T 28-03-2018 IPR003347 JmjC domain AM393_RS12560 188eb656b7d2006c1d9a1534a4797f9e 191 SUPERFAMILY SSF48498 79 180 2.22E-5 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AM393_RS12560 188eb656b7d2006c1d9a1534a4797f9e 191 SUPERFAMILY SSF46689 2 66 5.64E-8 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS12560 188eb656b7d2006c1d9a1534a4797f9e 191 Gene3D G3DSA:1.10.10.60 2 56 1.7E-7 T 28-03-2018 AM393_RS12560 188eb656b7d2006c1d9a1534a4797f9e 191 Gene3D G3DSA:1.10.357.10 57 180 3.5E-15 T 28-03-2018 AM393_RS22875 c4e7083e5354343706143d6f1b6a6ef3 342 SUPERFAMILY SSF53822 66 342 4.52E-55 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AM393_RS22875 c4e7083e5354343706143d6f1b6a6ef3 342 SUPERFAMILY SSF47413 5 64 3.38E-16 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM393_RS22875 c4e7083e5354343706143d6f1b6a6ef3 342 SMART SM00354 6 76 1.7E-32 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM393_RS22875 c4e7083e5354343706143d6f1b6a6ef3 342 Gene3D G3DSA:3.40.50.2300 181 330 5.5E-32 T 28-03-2018 AM393_RS22875 c4e7083e5354343706143d6f1b6a6ef3 342 Gene3D G3DSA:3.40.50.2300 60 180 1.9E-34 T 28-03-2018 AM393_RS22875 c4e7083e5354343706143d6f1b6a6ef3 342 Pfam PF00356 Bacterial regulatory proteins, lacI family 8 53 3.0E-18 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM393_RS22875 c4e7083e5354343706143d6f1b6a6ef3 342 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 65 339 8.1E-74 T 28-03-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain AM393_RS22875 c4e7083e5354343706143d6f1b6a6ef3 342 Gene3D G3DSA:1.10.260.40 7 59 2.9E-20 T 28-03-2018 AM393_RS22875 c4e7083e5354343706143d6f1b6a6ef3 342 ProSitePatterns PS00356 LacI-type HTH domain signature. 9 27 - T 28-03-2018 AM393_RS09630 ed0e4f95c7bf24b424f071eaf1ac529d 323 Gene3D G3DSA:3.40.50.2000 164 320 8.4E-33 T 28-03-2018 AM393_RS09630 ed0e4f95c7bf24b424f071eaf1ac529d 323 Gene3D G3DSA:3.40.50.2000 1 163 1.5E-39 T 28-03-2018 AM393_RS09630 ed0e4f95c7bf24b424f071eaf1ac529d 323 SUPERFAMILY SSF53756 1 302 6.28E-72 T 28-03-2018 AM393_RS09630 ed0e4f95c7bf24b424f071eaf1ac529d 323 TIGRFAM TIGR02193 heptsyl_trn_I: lipopolysaccharide heptosyltransferase I 2 319 1.1E-132 T 28-03-2018 IPR011908 Lipopolysaccharide heptosyltransferase I GO:0008920|GO:0009244 AM393_RS09630 ed0e4f95c7bf24b424f071eaf1ac529d 323 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 76 302 2.4E-78 T 28-03-2018 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 AM393_RS18470 12b9848d0922c27344e085b16412f7d9 250 Pfam PF13242 HAD-hyrolase-like 174 246 2.1E-19 T 28-03-2018 AM393_RS18470 12b9848d0922c27344e085b16412f7d9 250 TIGRFAM TIGR01460 HAD-SF-IIA: HAD hydrolase, family IIA 6 223 4.0E-64 T 28-03-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA AM393_RS18470 12b9848d0922c27344e085b16412f7d9 250 Pfam PF13344 Haloacid dehalogenase-like hydrolase 6 105 2.5E-23 T 28-03-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA AM393_RS18470 12b9848d0922c27344e085b16412f7d9 250 SUPERFAMILY SSF56784 1 247 4.33E-64 T 28-03-2018 IPR023214 HAD-like domain AM393_RS18470 12b9848d0922c27344e085b16412f7d9 250 Gene3D G3DSA:3.40.50.1000 1 250 1.9E-28 T 28-03-2018 IPR023214 HAD-like domain AM393_RS16220 94c42255851420184f07f1cbda280fce 320 Gene3D G3DSA:3.40.1190.20 1 312 2.7E-44 T 28-03-2018 IPR029056 Ribokinase-like AM393_RS16220 94c42255851420184f07f1cbda280fce 320 Pfam PF00294 pfkB family carbohydrate kinase 20 299 1.6E-34 T 28-03-2018 IPR011611 Carbohydrate kinase PfkB AM393_RS16220 94c42255851420184f07f1cbda280fce 320 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 251 264 - T 28-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AM393_RS16220 94c42255851420184f07f1cbda280fce 320 SUPERFAMILY SSF53613 1 303 1.71E-47 T 28-03-2018 IPR029056 Ribokinase-like AM393_RS05480 76abfbb25b650a0769427c9e6adc6e7e 475 Gene3D G3DSA:3.20.20.80 6 466 8.3E-115 T 28-03-2018 AM393_RS05480 76abfbb25b650a0769427c9e6adc6e7e 475 SUPERFAMILY SSF51445 4 460 4.53E-132 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily AM393_RS05480 76abfbb25b650a0769427c9e6adc6e7e 475 PRINTS PR00131 Glycosyl hydrolase family 1 signature 434 446 1.5E-10 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AM393_RS05480 76abfbb25b650a0769427c9e6adc6e7e 475 PRINTS PR00131 Glycosyl hydrolase family 1 signature 365 373 1.5E-10 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AM393_RS05480 76abfbb25b650a0769427c9e6adc6e7e 475 PRINTS PR00131 Glycosyl hydrolase family 1 signature 293 307 1.5E-10 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AM393_RS05480 76abfbb25b650a0769427c9e6adc6e7e 475 PRINTS PR00131 Glycosyl hydrolase family 1 signature 410 427 1.5E-10 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AM393_RS05480 76abfbb25b650a0769427c9e6adc6e7e 475 PRINTS PR00131 Glycosyl hydrolase family 1 signature 389 400 1.5E-10 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AM393_RS05480 76abfbb25b650a0769427c9e6adc6e7e 475 Pfam PF00232 Glycosyl hydrolase family 1 6 463 6.2E-99 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AM393_RS28545 85c67f72c3c3936397b2b8174b0eb59b 326 Pfam PF05598 Transposase domain (DUF772) 51 124 3.6E-21 T 28-03-2018 IPR008490 Transposase InsH, N-terminal AM393_RS28545 85c67f72c3c3936397b2b8174b0eb59b 326 Pfam PF01609 Transposase DDE domain 138 312 1.2E-31 T 28-03-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AM393_RS03965 20f075c54d14cd2eed33fb94e3ba0a1e 456 Pfam PF03929 PepSY-associated TM region 15 386 1.0E-57 T 28-03-2018 IPR005625 PepSY-associated TM protein AM393_RS19735 4fd1c0d105e4bd4a0e37576581b6b6ae 243 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 23 242 8.1E-72 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM393_RS19735 4fd1c0d105e4bd4a0e37576581b6b6ae 243 Gene3D G3DSA:3.40.190.10 12 143 1.7E-37 T 28-03-2018 AM393_RS19735 4fd1c0d105e4bd4a0e37576581b6b6ae 243 SMART SM00079 22 243 0.0028 T 28-03-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 AM393_RS19735 4fd1c0d105e4bd4a0e37576581b6b6ae 243 SMART SM00062 22 243 1.2E-88 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM393_RS19735 4fd1c0d105e4bd4a0e37576581b6b6ae 243 Gene3D G3DSA:3.40.190.10 144 243 1.7E-19 T 28-03-2018 AM393_RS19735 4fd1c0d105e4bd4a0e37576581b6b6ae 243 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 4 241 1.4E-89 T 28-03-2018 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter GO:0006810|GO:0030288 AM393_RS19735 4fd1c0d105e4bd4a0e37576581b6b6ae 243 SUPERFAMILY SSF53850 1 242 1.43E-73 T 28-03-2018 AM393_RS19735 4fd1c0d105e4bd4a0e37576581b6b6ae 243 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 45 58 - T 28-03-2018 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 AM393_RS00135 4e73f91fbcccfd790c1253932facb575 308 Gene3D G3DSA:3.40.190.10 101 197 1.3E-11 T 28-03-2018 AM393_RS00135 4e73f91fbcccfd790c1253932facb575 308 SUPERFAMILY SSF53850 95 299 6.88E-37 T 28-03-2018 AM393_RS00135 4e73f91fbcccfd790c1253932facb575 308 Gene3D G3DSA:3.40.190.10 198 274 8.2E-9 T 28-03-2018 AM393_RS00135 4e73f91fbcccfd790c1253932facb575 308 SUPERFAMILY SSF46785 8 87 3.4E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS00135 4e73f91fbcccfd790c1253932facb575 308 Pfam PF03466 LysR substrate binding domain 105 300 1.7E-19 T 28-03-2018 IPR005119 LysR, substrate-binding AM393_RS00135 4e73f91fbcccfd790c1253932facb575 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 67 3.2E-14 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS00135 4e73f91fbcccfd790c1253932facb575 308 Gene3D G3DSA:1.10.10.10 7 89 5.2E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS26890 272ad87c291454e445c375895e1e4053 304 Pfam PF13407 Periplasmic binding protein domain 24 279 3.2E-51 T 28-03-2018 IPR025997 Periplasmic binding protein AM393_RS26890 272ad87c291454e445c375895e1e4053 304 Gene3D G3DSA:3.40.50.2300 17 131 1.2E-20 T 28-03-2018 AM393_RS26890 272ad87c291454e445c375895e1e4053 304 SUPERFAMILY SSF53822 23 300 5.3E-75 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AM393_RS26890 272ad87c291454e445c375895e1e4053 304 Gene3D G3DSA:3.40.50.2300 132 304 1.6E-40 T 28-03-2018 AM393_RS08400 a93c89b1825b72d58b714c11f37e435d 72 Pfam PF04102 SlyX 6 72 3.9E-23 T 28-03-2018 IPR007236 SlyX AM393_RS08400 a93c89b1825b72d58b714c11f37e435d 72 Hamap MF_00715 Protein SlyX [slyX]. 5 72 16.945 T 28-03-2018 IPR007236 SlyX AM393_RS08400 a93c89b1825b72d58b714c11f37e435d 72 Gene3D G3DSA:1.20.5.300 4 50 1.2E-16 T 28-03-2018 AM393_RS11990 2ff0225c9d7dbbf8950c0a8840179eb1 55 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 7 54 4.3E-10 T 28-03-2018 IPR008407 Branched-chain amino acid transport, AzlD AM393_RS02305 6f08fa0aab384e647f9c84527ba95e8d 341 Gene3D G3DSA:1.10.3720.10 10 328 3.2E-40 T 28-03-2018 AM393_RS02305 6f08fa0aab384e647f9c84527ba95e8d 341 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 9 51 2.7E-6 T 28-03-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain AM393_RS02305 6f08fa0aab384e647f9c84527ba95e8d 341 SUPERFAMILY SSF161098 135 322 1.23E-20 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS02305 6f08fa0aab384e647f9c84527ba95e8d 341 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 158 338 5.0E-29 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS24260 756b3463fc792e6131b23047d9a33f1b 366 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 4 336 2.8E-63 T 28-03-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 AM393_RS24260 756b3463fc792e6131b23047d9a33f1b 366 SUPERFAMILY SSF51395 1 354 3.36E-115 T 28-03-2018 AM393_RS24260 756b3463fc792e6131b23047d9a33f1b 366 Gene3D G3DSA:3.20.20.70 1 361 6.1E-117 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM393_RS26610 7da542c181ae7ea834917241487155ef 302 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 24 76 2.5E-13 T 28-03-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain AM393_RS26610 7da542c181ae7ea834917241487155ef 302 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 119 300 9.2E-26 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS26610 7da542c181ae7ea834917241487155ef 302 SUPERFAMILY SSF161098 100 283 1.57E-23 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS26610 7da542c181ae7ea834917241487155ef 302 Gene3D G3DSA:1.10.3720.10 28 291 2.1E-37 T 28-03-2018 AM393_RS08825 cd55eab00e1692d527a45e3fb98e5385 281 Gene3D G3DSA:1.10.3720.10 3 270 1.5E-31 T 28-03-2018 AM393_RS08825 cd55eab00e1692d527a45e3fb98e5385 281 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 276 6.1E-21 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS08825 cd55eab00e1692d527a45e3fb98e5385 281 SUPERFAMILY SSF161098 4 277 1.03E-58 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS04815 a3af67867a29e12e413d627bf8faaba6 349 TIGRFAM TIGR00094 tRNA_TruD_broad: tRNA pseudouridine synthase, TruD family 1 342 1.4E-94 T 28-03-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM393_RS04815 a3af67867a29e12e413d627bf8faaba6 349 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 10 167 1.4E-41 T 28-03-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM393_RS04815 a3af67867a29e12e413d627bf8faaba6 349 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 188 337 2.7E-17 T 28-03-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM393_RS04815 a3af67867a29e12e413d627bf8faaba6 349 Hamap MF_01082 tRNA pseudouridine synthase D [truD]. 5 342 28.221 T 28-03-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM393_RS04815 a3af67867a29e12e413d627bf8faaba6 349 SUPERFAMILY SSF55120 3 340 1.4E-101 T 28-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM393_RS04815 a3af67867a29e12e413d627bf8faaba6 349 ProSitePatterns PS01268 Uncharacterized protein family UPF0024 signature. 77 90 - T 28-03-2018 IPR020119 Pseudouridine synthase TruD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Reactome: R-HSA-6782315 AM393_RS04815 a3af67867a29e12e413d627bf8faaba6 349 Gene3D G3DSA:3.30.2340.10 167 302 9.5E-28 T 28-03-2018 AM393_RS15235 ed5dafa5246a14c11f9562208c393de0 265 Pfam PF00005 ABC transporter 27 176 3.9E-32 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS15235 ed5dafa5246a14c11f9562208c393de0 265 SMART SM00382 36 224 3.8E-16 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS15235 ed5dafa5246a14c11f9562208c393de0 265 SUPERFAMILY SSF52540 13 239 4.87E-63 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS15235 ed5dafa5246a14c11f9562208c393de0 265 Gene3D G3DSA:3.40.50.300 1 245 1.0E-62 T 28-03-2018 AM393_RS15235 ed5dafa5246a14c11f9562208c393de0 265 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS05255 a37aa149c6a9191737adc92f7c80f001 229 PIRSF PIRSF018506 1 229 3.6E-109 T 28-03-2018 IPR025541 Propanediol/glycerol dehydratase, medium subunit KEGG: 00640+4.2.1.28|MetaCyc: PWY-7013 AM393_RS05255 a37aa149c6a9191737adc92f7c80f001 229 Pfam PF02288 Dehydratase medium subunit 74 186 4.2E-35 T 28-03-2018 IPR003208 Diol/glycerol dehydratase/dehydratase reactivating factor AM393_RS05255 a37aa149c6a9191737adc92f7c80f001 229 Gene3D G3DSA:3.40.50.10150 55 226 4.4E-77 T 28-03-2018 IPR010254 B12-dependent dehydratases, beta subunit AM393_RS05255 a37aa149c6a9191737adc92f7c80f001 229 SUPERFAMILY SSF52968 52 229 1.7E-73 T 28-03-2018 IPR010254 B12-dependent dehydratases, beta subunit AM393_RS15820 458e2c78a1b6d11fd171a3dff0b4398b 88 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 25 75 1.3E-21 T 28-03-2018 IPR010260 DNA-binding transcriptional activator AlpA AM393_RS15820 458e2c78a1b6d11fd171a3dff0b4398b 88 Gene3D G3DSA:1.10.10.10 28 86 3.7E-6 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS28060 1d292c864f8e257a60c68520e98c4be0 121 Gene3D G3DSA:3.10.180.10 1 121 1.5E-18 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM393_RS28060 1d292c864f8e257a60c68520e98c4be0 121 SUPERFAMILY SSF54593 5 120 6.34E-26 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM393_RS16250 145f0540836123ec25c5dd106e34b238 354 Pfam PF02547 Queuosine biosynthesis protein 4 343 4.6E-132 T 28-03-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 AM393_RS16250 145f0540836123ec25c5dd106e34b238 354 Gene3D G3DSA:3.40.1780.10 1 128 1.2E-30 T 28-03-2018 AM393_RS16250 145f0540836123ec25c5dd106e34b238 354 Gene3D G3DSA:3.40.1780.10 175 344 3.1E-66 T 28-03-2018 AM393_RS16250 145f0540836123ec25c5dd106e34b238 354 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 344 2.8E-166 T 28-03-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 AM393_RS16250 145f0540836123ec25c5dd106e34b238 354 SUPERFAMILY SSF111337 1 343 1.2E-137 T 28-03-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 AM393_RS16250 145f0540836123ec25c5dd106e34b238 354 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 344 47.383 T 28-03-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 AM393_RS23460 9f566e39ac77dd84ab3e6df54ce2b4bb 265 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 242 264 4.2E-8 T 28-03-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal AM393_RS23460 9f566e39ac77dd84ab3e6df54ce2b4bb 265 Gene3D G3DSA:3.40.50.300 11 264 4.0E-58 T 28-03-2018 AM393_RS23460 9f566e39ac77dd84ab3e6df54ce2b4bb 265 TIGRFAM TIGR03411 urea_trans_UrtD: urea ABC transporter, ATP-binding protein UrtD 24 265 1.7E-111 T 28-03-2018 IPR017781 ABC transporter, urea, ATP-binding protein, UrtD AM393_RS23460 9f566e39ac77dd84ab3e6df54ce2b4bb 265 Pfam PF00005 ABC transporter 40 194 2.8E-28 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS23460 9f566e39ac77dd84ab3e6df54ce2b4bb 265 SUPERFAMILY SSF52540 22 263 6.04E-56 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS27150 94348d04d9a12e8c15b1a44b31d5e17b 52 PRINTS PR00281 Hok/Gef cell toxic protein family signature 27 49 4.7E-17 T 28-03-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 AM393_RS27150 94348d04d9a12e8c15b1a44b31d5e17b 52 PRINTS PR00281 Hok/Gef cell toxic protein family signature 7 25 4.7E-17 T 28-03-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 AM393_RS27150 94348d04d9a12e8c15b1a44b31d5e17b 52 ProSitePatterns PS00556 Hok/gef family cell toxic proteins signature. 12 31 - T 28-03-2018 IPR018084 Hok/gef cell toxic protein, conserved site GO:0016020 AM393_RS27150 94348d04d9a12e8c15b1a44b31d5e17b 52 ProDom PD005979 PLASMID MEMBRANE TRANSMEMBRANE POST-SEGREGATION KILLING INHERITANCE ALTERING PERMEABILITY STABLE MAINTENANCE 3 50 2.0E-17 T 28-03-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 AM393_RS27150 94348d04d9a12e8c15b1a44b31d5e17b 52 Pfam PF01848 Hok/gef family 8 48 2.3E-17 T 28-03-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 AM393_RS00310 a807ea2073cd6708c0a30b76499ef693 114 Gene3D G3DSA:2.60.120.10 6 106 1.2E-40 T 28-03-2018 IPR014710 RmlC-like jelly roll fold AM393_RS00310 a807ea2073cd6708c0a30b76499ef693 114 SUPERFAMILY SSF51197 5 101 1.03E-32 T 28-03-2018 AM393_RS00310 a807ea2073cd6708c0a30b76499ef693 114 PIRSF PIRSF020632 3 113 3.3E-59 T 28-03-2018 IPR014510 Tellurite resistance predicted, YeaR AM393_RS00310 a807ea2073cd6708c0a30b76499ef693 114 Pfam PF09313 Domain of unknown function (DUF1971) 14 94 1.9E-27 T 28-03-2018 IPR015392 Domain of unknown function DUF1971 AM393_RS00585 e73853c0aa4bcc5af143936668a2a479 289 Pfam PF05425 Copper resistance protein D 186 282 9.2E-20 T 28-03-2018 IPR008457 Copper resistance protein D GO:0016021 AM393_RS10420 b778e2b7a6001b3fb4d52c882df4bafa 188 SUPERFAMILY SSF52218 6 178 4.35E-44 T 28-03-2018 IPR029039 Flavoprotein-like domain AM393_RS10420 b778e2b7a6001b3fb4d52c882df4bafa 188 Pfam PF03358 NADPH-dependent FMN reductase 6 148 2.3E-38 T 28-03-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 AM393_RS10420 b778e2b7a6001b3fb4d52c882df4bafa 188 Gene3D G3DSA:3.40.50.360 1 188 5.5E-36 T 28-03-2018 IPR029039 Flavoprotein-like domain AM393_RS21470 40faf61ef62e0102b4592bcc4acbb485 112 Gene3D G3DSA:3.30.1450.10 28 101 9.8E-7 T 28-03-2018 AM393_RS21470 40faf61ef62e0102b4592bcc4acbb485 112 Pfam PF04355 SmpA / OmlA family 31 96 6.9E-12 T 28-03-2018 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 AM393_RS27900 ed5469ee01c0f31d6f893666f030332b 67 Pfam PF03811 InsA N-terminal domain 2 36 1.3E-18 T 28-03-2018 IPR003220 InsA N-terminal domain GO:0006313 AM393_RS27900 ed5469ee01c0f31d6f893666f030332b 67 Pfam PF12759 InsA C-terminal domain 43 62 7.5E-10 T 28-03-2018 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain AM393_RS20135 fab4127632c28d7c7049a219e1703238 381 Hamap MF_01229 Alkanesulfonate monooxygenase [ssuD]. 4 379 70.445 T 28-03-2018 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent GO:0008726|GO:0055114 KEGG: 00920+1.14.14.5 AM393_RS20135 fab4127632c28d7c7049a219e1703238 381 Gene3D G3DSA:3.20.20.30 1 355 3.2E-92 T 28-03-2018 AM393_RS20135 fab4127632c28d7c7049a219e1703238 381 TIGRFAM TIGR03565 alk_sulf_monoox: alkanesulfonate monooxygenase, FMNH(2)-dependent 4 349 1.2E-190 T 28-03-2018 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent GO:0008726|GO:0055114 KEGG: 00920+1.14.14.5 AM393_RS20135 fab4127632c28d7c7049a219e1703238 381 Pfam PF00296 Luciferase-like monooxygenase 5 326 3.0E-88 T 28-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AM393_RS20135 fab4127632c28d7c7049a219e1703238 381 SUPERFAMILY SSF51679 3 349 2.09E-100 T 28-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AM393_RS05635 e3e053b0861861427be92144f91373ea 202 SUPERFAMILY SSF49401 31 202 1.04E-19 T 28-03-2018 IPR008966 Adhesion domain AM393_RS05635 e3e053b0861861427be92144f91373ea 202 Gene3D G3DSA:2.60.40.1090 30 202 3.6E-25 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM393_RS13400 3fb98f284f76b1ad9b799522856d6b77 436 SUPERFAMILY SSF53850 35 420 1.09E-77 T 28-03-2018 AM393_RS13400 3fb98f284f76b1ad9b799522856d6b77 436 Gene3D G3DSA:3.40.190.10 143 431 2.1E-50 T 28-03-2018 AM393_RS13400 3fb98f284f76b1ad9b799522856d6b77 436 Pfam PF13416 Bacterial extracellular solute-binding protein 45 360 6.0E-42 T 28-03-2018 AM393_RS03160 158121e897d307aa151f0c3bf219fa0b 303 Gene3D G3DSA:3.40.50.1100 130 303 2.4E-47 T 28-03-2018 AM393_RS03160 158121e897d307aa151f0c3bf219fa0b 303 TIGRFAM TIGR01138 cysM: cysteine synthase B 3 292 2.2E-168 T 28-03-2018 IPR005858 Cysteine synthase CysM GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 AM393_RS03160 158121e897d307aa151f0c3bf219fa0b 303 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 30 48 - T 28-03-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 AM393_RS03160 158121e897d307aa151f0c3bf219fa0b 303 SUPERFAMILY SSF53686 3 289 2.62E-93 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AM393_RS03160 158121e897d307aa151f0c3bf219fa0b 303 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 5 281 1.4E-68 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AM393_RS03160 158121e897d307aa151f0c3bf219fa0b 303 TIGRFAM TIGR01136 cysKM: cysteine synthase 5 292 1.3E-127 T 28-03-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 AM393_RS03160 158121e897d307aa151f0c3bf219fa0b 303 Gene3D G3DSA:3.40.50.1100 20 129 1.1E-34 T 28-03-2018 AM393_RS24205 188eada5d6a714e32c07bc285689af5c 145 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 6 144 3.7E-31 T 28-03-2018 IPR002178 PTS EIIA type-2 domain AM393_RS24205 188eada5d6a714e32c07bc285689af5c 145 Gene3D G3DSA:3.40.930.10 1 145 7.0E-33 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 AM393_RS24205 188eada5d6a714e32c07bc285689af5c 145 SUPERFAMILY SSF55804 1 144 5.76E-36 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 AM393_RS24205 188eada5d6a714e32c07bc285689af5c 145 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 51 67 - T 28-03-2018 IPR002178 PTS EIIA type-2 domain AM393_RS17625 7c048b245d9baae0725534ed642c4d94 227 Gene3D G3DSA:2.60.40.10 21 146 9.7E-13 T 28-03-2018 IPR013783 Immunoglobulin-like fold AM393_RS17625 7c048b245d9baae0725534ed642c4d94 227 SUPERFAMILY SSF49354 18 145 3.14E-7 T 28-03-2018 IPR008962 PapD-like AM393_RS07825 f36dbd55df1fd682c868c116ca6ae5aa 91 Gene3D G3DSA:3.30.370.10 1 90 4.2E-20 T 28-03-2018 IPR000468 Barstar (barnase inhibitor) AM393_RS07825 f36dbd55df1fd682c868c116ca6ae5aa 91 Pfam PF01337 Barstar (barnase inhibitor) 5 78 1.2E-5 T 28-03-2018 IPR000468 Barstar (barnase inhibitor) AM393_RS07825 f36dbd55df1fd682c868c116ca6ae5aa 91 SUPERFAMILY SSF52038 1 88 4.71E-28 T 28-03-2018 IPR000468 Barstar (barnase inhibitor) AM393_RS24245 ba4e0bca700647e14eb794f502429171 308 Pfam PF00892 EamA-like transporter family 151 290 4.4E-20 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM393_RS24245 ba4e0bca700647e14eb794f502429171 308 Pfam PF00892 EamA-like transporter family 2 135 2.0E-16 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM393_RS24245 ba4e0bca700647e14eb794f502429171 308 SUPERFAMILY SSF103481 39 138 8.89E-10 T 28-03-2018 AM393_RS24245 ba4e0bca700647e14eb794f502429171 308 SUPERFAMILY SSF103481 188 295 2.75E-10 T 28-03-2018 AM393_RS02995 5a28b84ae2a932e3bc3c1649879a2937 565 Gene3D G3DSA:3.30.450.40 196 335 1.5E-4 T 28-03-2018 IPR029016 GAF domain-like AM393_RS02995 5a28b84ae2a932e3bc3c1649879a2937 565 SMART SM00387 452 554 6.3E-7 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS02995 5a28b84ae2a932e3bc3c1649879a2937 565 SUPERFAMILY SSF55781 227 345 1.07E-8 T 28-03-2018 IPR029016 GAF domain-like AM393_RS02995 5a28b84ae2a932e3bc3c1649879a2937 565 Pfam PF07694 5TMR of 5TMR-LYT 29 192 6.6E-43 T 28-03-2018 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 AM393_RS02995 5a28b84ae2a932e3bc3c1649879a2937 565 Gene3D G3DSA:3.30.565.10 336 552 1.2E-21 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS02995 5a28b84ae2a932e3bc3c1649879a2937 565 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 456 552 3.3E-6 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS02995 5a28b84ae2a932e3bc3c1649879a2937 565 SUPERFAMILY SSF55874 414 551 1.02E-16 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM393_RS02995 5a28b84ae2a932e3bc3c1649879a2937 565 Pfam PF06580 Histidine kinase 359 438 3.7E-24 T 28-03-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 AM393_RS24220 ef0dd6f0b227f97e484f2ecd6eb25809 432 SUPERFAMILY SSF103473 22 426 1.7E-50 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS24220 ef0dd6f0b227f97e484f2ecd6eb25809 432 Pfam PF07690 Major Facilitator Superfamily 49 281 1.6E-20 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS24220 ef0dd6f0b227f97e484f2ecd6eb25809 432 Gene3D G3DSA:1.20.1250.20 10 210 2.0E-19 T 28-03-2018 AM393_RS24220 ef0dd6f0b227f97e484f2ecd6eb25809 432 TIGRFAM TIGR04259 oxa_formateAnti: oxalate/formate antiporter 29 431 1.2E-124 T 28-03-2018 IPR026355 Oxalate/formate antiporter GO:0005215|GO:0006810|GO:0016021 AM393_RS24220 ef0dd6f0b227f97e484f2ecd6eb25809 432 Gene3D G3DSA:1.20.1250.20 229 431 1.1E-25 T 28-03-2018 AM393_RS13775 fa7d33e14706217651e48316c8ef26da 54 Pfam PF06568 Domain of unknown function (DUF1127) 18 53 1.6E-13 T 28-03-2018 IPR009506 Protein of unknown function DUF1127 AM393_RS07585 467f8db8c7007dfa4d32451e0b8bd3b8 321 SUPERFAMILY SSF103481 41 143 1.57E-12 T 28-03-2018 AM393_RS07585 467f8db8c7007dfa4d32451e0b8bd3b8 321 Pfam PF00892 EamA-like transporter family 159 291 5.9E-17 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM393_RS07585 467f8db8c7007dfa4d32451e0b8bd3b8 321 Pfam PF00892 EamA-like transporter family 7 142 5.9E-27 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM393_RS27410 c94b9d965c478a2bac062b1ddd1ebfb1 117 Pfam PF11604 Copper binding periplasmic protein CusF 47 105 1.8E-20 T 28-03-2018 IPR021647 Copper binding periplasmic protein CusF AM393_RS20065 3b105034f72516d3eae00af629f7f618 183 SUPERFAMILY SSF55166 67 183 6.02E-33 T 28-03-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 AM393_RS20065 3b105034f72516d3eae00af629f7f618 183 Gene3D G3DSA:3.30.1380.10 59 183 6.6E-23 T 28-03-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 AM393_RS20065 3b105034f72516d3eae00af629f7f618 183 Pfam PF05951 Bacterial protein of unknown function (DUF882) 35 183 1.1E-61 T 28-03-2018 IPR010275 Protein of unknown function DUF882 AM393_RS07680 4fb1164055c65bf6986386c297cc5211 477 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 364 383 - T 28-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AM393_RS07680 4fb1164055c65bf6986386c297cc5211 477 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 9 474 1.2E-162 T 28-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AM393_RS07680 4fb1164055c65bf6986386c297cc5211 477 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 455 462 - T 28-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AM393_RS07680 4fb1164055c65bf6986386c297cc5211 477 Pfam PF04963 Sigma-54 factor, core binding domain 114 303 4.7E-62 T 28-03-2018 IPR007046 RNA polymerase sigma factor 54, core-binding GO:0003677|GO:0006352 AM393_RS07680 4fb1164055c65bf6986386c297cc5211 477 PRINTS PR00045 Sigma-54 factor signature 186 203 2.0E-31 T 28-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AM393_RS07680 4fb1164055c65bf6986386c297cc5211 477 PRINTS PR00045 Sigma-54 factor signature 376 388 2.0E-31 T 28-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AM393_RS07680 4fb1164055c65bf6986386c297cc5211 477 PRINTS PR00045 Sigma-54 factor signature 450 468 2.0E-31 T 28-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AM393_RS07680 4fb1164055c65bf6986386c297cc5211 477 PRINTS PR00045 Sigma-54 factor signature 392 403 2.0E-31 T 28-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AM393_RS07680 4fb1164055c65bf6986386c297cc5211 477 Pfam PF04552 Sigma-54, DNA binding domain 317 475 7.6E-71 T 28-03-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding AM393_RS07680 4fb1164055c65bf6986386c297cc5211 477 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 5 48 1.0E-15 T 28-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AM393_RS07680 4fb1164055c65bf6986386c297cc5211 477 PIRSF PIRSF000774 1 477 6.5E-153 T 28-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AM393_RS07680 4fb1164055c65bf6986386c297cc5211 477 Gene3D G3DSA:1.10.10.10 322 413 9.2E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS27415 18a8f81eb350d575bdd94bbb4cf658f5 430 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 206 398 2.4E-37 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AM393_RS27415 18a8f81eb350d575bdd94bbb4cf658f5 430 Gene3D G3DSA:2.40.50.100 131 246 3.3E-10 T 28-03-2018 AM393_RS27415 18a8f81eb350d575bdd94bbb4cf658f5 430 SUPERFAMILY SSF111369 126 326 1.2E-11 T 28-03-2018 AM393_RS27415 18a8f81eb350d575bdd94bbb4cf658f5 430 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 115 321 9.8E-63 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AM393_RS05085 6b9f4121c93dc64ffbd1383f89949803 131 Pfam PF04241 Protein of unknown function (DUF423) 20 106 3.6E-23 T 28-03-2018 IPR006696 Protein of unknown function DUF423 AM393_RS06980 02d27d13fe75b62a4f419d81f0a58698 213 Pfam PF10938 YfdX protein 57 208 3.5E-47 T 28-03-2018 IPR021236 Uncharacterised protein family YfdX AM393_RS09445 136cc55f399d774a86b05bc669312e82 331 Gene3D G3DSA:3.40.50.2300 27 131 2.6E-20 T 28-03-2018 AM393_RS09445 136cc55f399d774a86b05bc669312e82 331 SUPERFAMILY SSF53822 25 318 1.23E-71 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AM393_RS09445 136cc55f399d774a86b05bc669312e82 331 Pfam PF13407 Periplasmic binding protein domain 39 283 1.6E-61 T 28-03-2018 IPR025997 Periplasmic binding protein AM393_RS09445 136cc55f399d774a86b05bc669312e82 331 Gene3D G3DSA:3.40.50.2300 132 330 3.1E-36 T 28-03-2018 AM393_RS09445 136cc55f399d774a86b05bc669312e82 331 TIGRFAM TIGR02634 xylF: D-xylose ABC transporter, D-xylose-binding protein 29 331 3.6E-166 T 28-03-2018 IPR013456 D-xylose ABC transporter, substrate-binding protein GO:0015753|GO:0048029 AM393_RS19505 dfc28f6effdcfc69f826a25180c1522a 580 Pfam PF10592 AIPR protein 233 455 1.0E-43 T 28-03-2018 IPR018891 Abortive bacteriophage infection, resistance AM393_RS15400 1b6719d1407d02eaf0c17ed5aefdaa1b 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 200 209 3.9E-50 T 28-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AM393_RS15400 1b6719d1407d02eaf0c17ed5aefdaa1b 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 156 169 3.9E-50 T 28-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AM393_RS15400 1b6719d1407d02eaf0c17ed5aefdaa1b 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 116 134 3.9E-50 T 28-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AM393_RS15400 1b6719d1407d02eaf0c17ed5aefdaa1b 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 172 185 3.9E-50 T 28-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AM393_RS15400 1b6719d1407d02eaf0c17ed5aefdaa1b 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 137 153 3.9E-50 T 28-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AM393_RS15400 1b6719d1407d02eaf0c17ed5aefdaa1b 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 91 102 3.9E-50 T 28-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AM393_RS15400 1b6719d1407d02eaf0c17ed5aefdaa1b 319 Gene3D G3DSA:3.90.226.10 9 316 6.0E-69 T 28-03-2018 AM393_RS15400 1b6719d1407d02eaf0c17ed5aefdaa1b 319 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 5 319 50.578 T 28-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AM393_RS15400 1b6719d1407d02eaf0c17ed5aefdaa1b 319 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 5 151 5.9E-62 T 28-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AM393_RS15400 1b6719d1407d02eaf0c17ed5aefdaa1b 319 SUPERFAMILY SSF52096 5 318 7.57E-103 T 28-03-2018 IPR029045 ClpP/crotonase-like domain AM393_RS15400 1b6719d1407d02eaf0c17ed5aefdaa1b 319 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 319 1.6E-172 T 28-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AM393_RS28430 e36e61ca63f23e3c244ecf0b7985510c 264 Pfam PF00589 Phage integrase family 41 232 2.7E-48 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM393_RS28430 e36e61ca63f23e3c244ecf0b7985510c 264 PIRSF PIRSF004576 2 257 5.9E-115 T 28-03-2018 IPR016423 Resolvase, Rsv AM393_RS28430 e36e61ca63f23e3c244ecf0b7985510c 264 Gene3D G3DSA:1.10.443.10 37 249 2.0E-27 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM393_RS28430 e36e61ca63f23e3c244ecf0b7985510c 264 SUPERFAMILY SSF56349 39 233 8.24E-27 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AM393_RS19620 19f930b190e1d7f7a9fe698bfc1592b4 390 Pfam PF04984 Phage tail sheath protein subtilisin-like domain 108 273 3.9E-33 T 28-03-2018 IPR035089 Tail sheath protein, subtilisin-like domain AM393_RS19620 19f930b190e1d7f7a9fe698bfc1592b4 390 Pfam PF17482 Phage tail sheath C-terminal domain 275 377 2.4E-16 T 28-03-2018 IPR020287 Tail sheath protein, C-terminal domain AM393_RS10535 e8d097a6d972c9b7f506bc313c7bcf52 126 Pfam PF03899 ATP synthase I chain 13 108 1.4E-15 T 28-03-2018 IPR005598 ATP synthase protein I AM393_RS02820 4ba65e99c8d866ce598d1db4da7cd396 505 SUPERFAMILY SSF53271 252 485 5.64E-72 T 28-03-2018 IPR029057 Phosphoribosyltransferase-like AM393_RS02820 4ba65e99c8d866ce598d1db4da7cd396 505 PIRSF PIRSF000485 1 483 7.5E-173 T 28-03-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 AM393_RS02820 4ba65e99c8d866ce598d1db4da7cd396 505 Pfam PF13522 Glutamine amidotransferase domain 63 196 1.4E-15 T 28-03-2018 AM393_RS02820 4ba65e99c8d866ce598d1db4da7cd396 505 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 466 44.939 T 28-03-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 AM393_RS02820 4ba65e99c8d866ce598d1db4da7cd396 505 SUPERFAMILY SSF56235 2 259 4.46E-75 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AM393_RS02820 4ba65e99c8d866ce598d1db4da7cd396 505 Gene3D G3DSA:3.40.50.2020 279 446 6.1E-38 T 28-03-2018 AM393_RS02820 4ba65e99c8d866ce598d1db4da7cd396 505 Gene3D G3DSA:3.60.20.10 45 278 7.9E-55 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AM393_RS02820 4ba65e99c8d866ce598d1db4da7cd396 505 Pfam PF00156 Phosphoribosyl transferase domain 286 394 6.9E-8 T 28-03-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 AM393_RS02820 4ba65e99c8d866ce598d1db4da7cd396 505 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 466 1.4E-163 T 28-03-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 AM393_RS23100 6c681dbac252e28898ce3ee5fc3156f2 306 SUPERFAMILY SSF53697 12 247 1.82E-42 T 28-03-2018 AM393_RS23100 6c681dbac252e28898ce3ee5fc3156f2 306 Gene3D G3DSA:1.10.8.10 241 270 3.3E-12 T 28-03-2018 AM393_RS23100 6c681dbac252e28898ce3ee5fc3156f2 306 Gene3D G3DSA:3.40.50.10490 3 240 1.2E-33 T 28-03-2018 AM393_RS19530 ffab3a7e6d8c511077e8e46e95e23142 216 Pfam PF05944 Phage small terminase subunit 35 163 2.8E-43 T 28-03-2018 IPR010270 Bacteriophage P2, GpM GO:0003677|GO:0004519|GO:0019069 AM393_RS19530 ffab3a7e6d8c511077e8e46e95e23142 216 Gene3D G3DSA:1.25.40.10 14 213 7.8E-4 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM393_RS19200 fbb351b92d101817e5dcf977bad5480e 731 SUPERFAMILY SSF82689 624 716 9.94E-9 T 28-03-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 AM393_RS19200 fbb351b92d101817e5dcf977bad5480e 731 SUPERFAMILY SSF50182 555 613 8.17E-10 T 28-03-2018 IPR010920 LSM domain AM393_RS19200 fbb351b92d101817e5dcf977bad5480e 731 Pfam PF00924 Mechanosensitive ion channel 512 711 4.4E-42 T 28-03-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AM393_RS19200 fbb351b92d101817e5dcf977bad5480e 731 Gene3D G3DSA:3.30.70.100 620 717 4.5E-6 T 28-03-2018 AM393_RS19200 fbb351b92d101817e5dcf977bad5480e 731 SUPERFAMILY SSF82861 473 553 3.01E-12 T 28-03-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 AM393_RS19200 fbb351b92d101817e5dcf977bad5480e 731 Gene3D G3DSA:2.30.30.60 572 619 5.0E-6 T 28-03-2018 AM393_RS03100 fcdff22123d8be60bb154e2366b8ee77 72 ProDom PD056452 UNCHARACTERIZED BACTERIA SIMILAR YPEB CYTOPLASMIC VCA0163 PRODUCT STM2426 GENE YPO2988 14 68 2.0E-22 T 28-03-2018 IPR024530 Putative quorum-sensing-regulated virulence factor AM393_RS03100 fcdff22123d8be60bb154e2366b8ee77 72 Pfam PF12843 Putative quorum-sensing-regulated virulence factor 2 68 1.2E-28 T 28-03-2018 IPR024530 Putative quorum-sensing-regulated virulence factor AM393_RS16735 36e7a2b921fb4e9be07889f8734f8839 125 Pfam PF04304 Protein of unknown function (DUF454) 5 116 7.5E-42 T 28-03-2018 IPR007401 Protein of unknown function DUF454 AM393_RS16735 36e7a2b921fb4e9be07889f8734f8839 125 PIRSF PIRSF016789 2 123 3.3E-49 T 28-03-2018 IPR007401 Protein of unknown function DUF454 AM393_RS27340 eb890ad11689d126144ad08cbd96e631 307 Pfam PF13737 Transposase DDE domain 19 130 2.1E-44 T 28-03-2018 IPR025668 Transposase DDE domain AM393_RS05615 0b19c0ac89d50e237f5e066f42fbf380 211 SUPERFAMILY SSF49401 35 211 3.63E-17 T 28-03-2018 IPR008966 Adhesion domain AM393_RS05615 0b19c0ac89d50e237f5e066f42fbf380 211 Gene3D G3DSA:2.60.40.1090 33 211 1.5E-22 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM393_RS26090 c0a0b733f1ab383c40e4cd1d174d50ac 254 SUPERFAMILY SSF161098 14 234 6.41E-43 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS26090 c0a0b733f1ab383c40e4cd1d174d50ac 254 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 65 248 1.7E-23 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS26090 c0a0b733f1ab383c40e4cd1d174d50ac 254 Gene3D G3DSA:1.10.3720.10 2 254 1.4E-46 T 28-03-2018 AM393_RS24175 8af7bd9a8ff623c6d2519cd5d52d2390 103 Gene3D G3DSA:3.40.50.2300 2 100 1.5E-37 T 28-03-2018 AM393_RS24175 8af7bd9a8ff623c6d2519cd5d52d2390 103 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 5 96 5.0E-19 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AM393_RS24175 8af7bd9a8ff623c6d2519cd5d52d2390 103 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 4 88 8.3E-32 T 28-03-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202|KEGG: 00230+2.7.1.20|MetaCyc: PWY-6619 AM393_RS24175 8af7bd9a8ff623c6d2519cd5d52d2390 103 SUPERFAMILY SSF52794 2 97 1.05E-33 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AM393_RS01330 1ac9971aa286e54f5144f8eb197fc336 235 Gene3D G3DSA:1.20.58.430 22 229 5.1E-30 T 28-03-2018 AM393_RS01330 1ac9971aa286e54f5144f8eb197fc336 235 Pfam PF07996 Type IV secretion system proteins 22 215 3.2E-46 T 28-03-2018 IPR014158 Type IV secretion system, VirB5 AM393_RS01330 1ac9971aa286e54f5144f8eb197fc336 235 SUPERFAMILY SSF101082 22 217 1.57E-37 T 28-03-2018 IPR023220 Type IV secretion system, VirB5-domain AM393_RS03235 acc6127e7be61fa7e703a4b18e8e3d3b 299 Hamap MF_00601 Ethanolamine ammonia-lyase light chain [eutC]. 61 298 40.632 T 28-03-2018 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 AM393_RS03235 acc6127e7be61fa7e703a4b18e8e3d3b 299 Pfam PF05985 Ethanolamine ammonia-lyase light chain (EutC) 70 297 6.3E-79 T 28-03-2018 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 AM393_RS03235 acc6127e7be61fa7e703a4b18e8e3d3b 299 PIRSF PIRSF018982 50 299 3.6E-102 T 28-03-2018 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 AM393_RS11040 4b0a66b0c745e993af53d65329fdc989 295 SUPERFAMILY SSF51730 22 294 2.94E-98 T 28-03-2018 IPR029041 FAD-linked oxidoreductase-like AM393_RS11040 4b0a66b0c745e993af53d65329fdc989 295 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 25 290 8.3E-107 T 28-03-2018 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841 AM393_RS11040 4b0a66b0c745e993af53d65329fdc989 295 Gene3D G3DSA:3.20.20.220 1 295 4.9E-102 T 28-03-2018 IPR029041 FAD-linked oxidoreductase-like AM393_RS11040 4b0a66b0c745e993af53d65329fdc989 295 Pfam PF02219 Methylenetetrahydrofolate reductase 16 291 2.0E-108 T 28-03-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 AM393_RS09960 99b9468cc79f9da4433ea96945a5e933 284 SUPERFAMILY SSF103481 184 279 1.2E-12 T 28-03-2018 AM393_RS09960 99b9468cc79f9da4433ea96945a5e933 284 Pfam PF00892 EamA-like transporter family 148 273 3.3E-15 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM393_RS09960 99b9468cc79f9da4433ea96945a5e933 284 Pfam PF00892 EamA-like transporter family 8 135 1.7E-12 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM393_RS09960 99b9468cc79f9da4433ea96945a5e933 284 SUPERFAMILY SSF103481 40 137 2.75E-9 T 28-03-2018 AM393_RS21100 d643a2a6cde089084b7bb60f3e2dabe1 212 Pfam PF01810 LysE type translocator 19 209 1.6E-51 T 28-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AM393_RS21100 d643a2a6cde089084b7bb60f3e2dabe1 212 PIRSF PIRSF006324 4 212 2.0E-60 T 28-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AM393_RS25245 a64386236b2d9c732856f08a4e27b3e5 388 Pfam PF03594 Benzoate membrane transport protein 7 380 1.6E-139 T 28-03-2018 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 AM393_RS25245 a64386236b2d9c732856f08a4e27b3e5 388 TIGRFAM TIGR00843 benE: benzoate transporter 1 382 4.6E-154 T 28-03-2018 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 AM393_RS03190 f961fc6b4195b55a0f529d799e298da5 299 Pfam PF04261 Dyp-type peroxidase family 5 294 1.3E-94 T 28-03-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 AM393_RS03190 f961fc6b4195b55a0f529d799e298da5 299 SUPERFAMILY SSF54909 1 297 6.97E-89 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel AM393_RS03190 f961fc6b4195b55a0f529d799e298da5 299 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 5 294 4.6E-87 T 28-03-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 AM393_RS17840 1c7eaaa934213b05c98079c86198369b 234 Pfam PF00005 ABC transporter 21 167 6.9E-32 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS17840 1c7eaaa934213b05c98079c86198369b 234 Gene3D G3DSA:3.40.50.300 1 233 3.8E-61 T 28-03-2018 AM393_RS17840 1c7eaaa934213b05c98079c86198369b 234 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS17840 1c7eaaa934213b05c98079c86198369b 234 SMART SM00382 28 216 2.4E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS17840 1c7eaaa934213b05c98079c86198369b 234 SUPERFAMILY SSF52540 3 228 1.41E-63 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS07695 104ff5fc9db77fac68fcba25f46f6e0c 284 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 1 281 40.998 T 28-03-2018 IPR005337 RapZ-like family GO:0005524 AM393_RS07695 104ff5fc9db77fac68fcba25f46f6e0c 284 Gene3D G3DSA:3.40.50.300 1 152 3.2E-11 T 28-03-2018 AM393_RS07695 104ff5fc9db77fac68fcba25f46f6e0c 284 SUPERFAMILY SSF52540 2 151 4.34E-13 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS07695 104ff5fc9db77fac68fcba25f46f6e0c 284 Pfam PF03668 P-loop ATPase protein family 1 282 5.5E-146 T 28-03-2018 IPR005337 RapZ-like family GO:0005524 AM393_RS07695 104ff5fc9db77fac68fcba25f46f6e0c 284 PIRSF PIRSF005052 1 284 2.6E-114 T 28-03-2018 IPR005337 RapZ-like family GO:0005524 AM393_RS02435 1f0a0375530d935478544fb23abe52e1 163 Pfam PF03974 Ecotin 31 153 6.6E-54 T 28-03-2018 IPR023189 Proteinase inhibitor I11, ecotin domain AM393_RS02435 1f0a0375530d935478544fb23abe52e1 163 Gene3D G3DSA:2.60.40.550 28 100 1.3E-35 T 28-03-2018 AM393_RS02435 1f0a0375530d935478544fb23abe52e1 163 Gene3D G3DSA:4.10.1230.10 106 160 4.0E-28 T 28-03-2018 IPR027438 Ecotin, C-terminal AM393_RS02435 1f0a0375530d935478544fb23abe52e1 163 Hamap MF_00706 Ecotin [eco]. 4 163 39.499 T 28-03-2018 IPR023084 Proteinase inhibitor I11, ecotin, gammaproteobacteria AM393_RS02435 1f0a0375530d935478544fb23abe52e1 163 SUPERFAMILY SSF49772 27 161 6.28E-57 T 28-03-2018 IPR023189 Proteinase inhibitor I11, ecotin domain AM393_RS02435 1f0a0375530d935478544fb23abe52e1 163 PIRSF PIRSF006865 2 163 1.5E-64 T 28-03-2018 IPR005658 Proteinase inhibitor I11, ecotin AM393_RS24570 ceed6ad1cb22fc15514bf31e6921d8a1 158 Pfam PF04657 Putative inner membrane exporter, YdcZ 5 140 1.4E-34 T 28-03-2018 IPR006750 Putative inner membrane exporter, YdcZ AM393_RS07630 cb06246a1701f4bc3147f08dfca2822d 183 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 2 153 4.5E-55 T 28-03-2018 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 AM393_RS07630 cb06246a1701f4bc3147f08dfca2822d 183 Pfam PF02470 MlaD protein 39 116 6.8E-22 T 28-03-2018 IPR003399 Mce/MlaD AM393_RS21340 54e7a04008d81646360f8a6814f9ef60 183 SUPERFAMILY SSF55469 1 172 8.25E-38 T 28-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AM393_RS21340 54e7a04008d81646360f8a6814f9ef60 183 Gene3D G3DSA:3.40.109.10 1 181 2.0E-32 T 28-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AM393_RS21340 54e7a04008d81646360f8a6814f9ef60 183 PIRSF PIRSF000232 1 182 1.3E-65 T 28-03-2018 IPR026021 Putative NAD(P)H nitroreductase YdjA-like AM393_RS21340 54e7a04008d81646360f8a6814f9ef60 183 Pfam PF00881 Nitroreductase family 8 161 3.6E-23 T 28-03-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 AM393_RS01535 d138fcee0d3e91d6d6d55cc127e513ea 165 Gene3D G3DSA:3.90.420.10 14 165 8.2E-22 T 28-03-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 AM393_RS01535 d138fcee0d3e91d6d6d55cc127e513ea 165 Pfam PF00174 Oxidoreductase molybdopterin binding domain 65 139 2.1E-5 T 28-03-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 AM393_RS01535 d138fcee0d3e91d6d6d55cc127e513ea 165 SUPERFAMILY SSF56524 32 163 8.04E-17 T 28-03-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 AM393_RS26195 41bfd348580ead1de5b0fc20f503a72c 268 SUPERFAMILY SSF56529 4 259 5.1E-78 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AM393_RS26195 41bfd348580ead1de5b0fc20f503a72c 268 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 82 258 1.7E-18 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AM393_RS26195 41bfd348580ead1de5b0fc20f503a72c 268 Gene3D G3DSA:3.90.850.10 2 267 4.6E-53 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AM393_RS26195 41bfd348580ead1de5b0fc20f503a72c 268 Hamap MF_01655 2-keto-4-pentenoate hydratase [mhpD]. 1 259 52.783 T 28-03-2018 IPR023793 2-keto-4-pentenoate hydratase GO:0008684|GO:0019439|GO:0030145 KEGG: 00360+4.2.1.80|KEGG: 00362+4.2.1.80|KEGG: 00621+4.2.1.80|KEGG: 00622+4.2.1.80|MetaCyc: PWY-5162|MetaCyc: PWY-5645 AM393_RS25580 79d32d6de26dee02a57b5ba50cff5241 457 Pfam PF01554 MatE 244 405 3.5E-36 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AM393_RS25580 79d32d6de26dee02a57b5ba50cff5241 457 Pfam PF01554 MatE 17 177 2.0E-40 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AM393_RS25580 79d32d6de26dee02a57b5ba50cff5241 457 Hamap MF_00400 Multidrug resistance protein MdtK [mdtK]. 1 457 52.126 T 28-03-2018 IPR022913 Multidrug resistance protein MdtK AM393_RS25580 79d32d6de26dee02a57b5ba50cff5241 457 PIRSF PIRSF006603 7 455 3.1E-54 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AM393_RS25580 79d32d6de26dee02a57b5ba50cff5241 457 TIGRFAM TIGR00797 matE: MATE efflux family protein 17 422 1.5E-121 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AM393_RS15845 7d3016c96dfb38bf71f9bfde85a31513 316 Pfam PF13614 AAA domain 3 209 6.3E-39 T 28-03-2018 IPR025669 AAA domain AM393_RS15845 7d3016c96dfb38bf71f9bfde85a31513 316 Gene3D G3DSA:3.40.50.300 1 316 1.0E-38 T 28-03-2018 AM393_RS15845 7d3016c96dfb38bf71f9bfde85a31513 316 SUPERFAMILY SSF52540 1 311 4.59E-34 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS22560 9e6a534f85a66abd9bb73f063a0b589d 144 Gene3D G3DSA:3.40.50.620 2 144 1.2E-29 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM393_RS22560 9e6a534f85a66abd9bb73f063a0b589d 144 PRINTS PR01438 Universal stress protein signature 2 20 1.7E-9 T 28-03-2018 IPR006015 Universal stress protein A AM393_RS22560 9e6a534f85a66abd9bb73f063a0b589d 144 PRINTS PR01438 Universal stress protein signature 105 117 1.7E-9 T 28-03-2018 IPR006015 Universal stress protein A AM393_RS22560 9e6a534f85a66abd9bb73f063a0b589d 144 PRINTS PR01438 Universal stress protein signature 122 144 1.7E-9 T 28-03-2018 IPR006015 Universal stress protein A AM393_RS22560 9e6a534f85a66abd9bb73f063a0b589d 144 SUPERFAMILY SSF52402 5 144 1.17E-28 T 28-03-2018 AM393_RS22560 9e6a534f85a66abd9bb73f063a0b589d 144 Pfam PF00582 Universal stress protein family 1 144 2.9E-24 T 28-03-2018 IPR006016 UspA GO:0006950 AM393_RS20695 d9c5b74bed8e97da006c4e1b2ab8d385 307 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 5 122 2.2E-25 T 28-03-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 AM393_RS20695 d9c5b74bed8e97da006c4e1b2ab8d385 307 Gene3D G3DSA:3.40.50.720 1 130 1.6E-31 T 28-03-2018 AM393_RS20695 d9c5b74bed8e97da006c4e1b2ab8d385 307 SUPERFAMILY SSF51735 5 138 3.4E-42 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS20695 d9c5b74bed8e97da006c4e1b2ab8d385 307 SUPERFAMILY SSF55347 124 264 4.58E-43 T 28-03-2018 AM393_RS20695 d9c5b74bed8e97da006c4e1b2ab8d385 307 Gene3D G3DSA:3.30.360.10 131 306 4.2E-16 T 28-03-2018 AM393_RS06640 d6e908cdaca2302818fac07faaaa2863 621 Pfam PF05257 CHAP domain 52 149 2.6E-11 T 28-03-2018 IPR007921 CHAP domain AM393_RS06640 d6e908cdaca2302818fac07faaaa2863 621 SUPERFAMILY SSF56059 497 614 5.56E-75 T 28-03-2018 AM393_RS06640 d6e908cdaca2302818fac07faaaa2863 621 SUPERFAMILY SSF56059 211 379 5.56E-75 T 28-03-2018 AM393_RS06640 d6e908cdaca2302818fac07faaaa2863 621 SUPERFAMILY SSF54001 10 196 9.81E-60 T 28-03-2018 AM393_RS06640 d6e908cdaca2302818fac07faaaa2863 621 Pfam PF03738 Glutathionylspermidine synthase preATP-grasp 243 615 2.1E-65 T 28-03-2018 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain AM393_RS06640 d6e908cdaca2302818fac07faaaa2863 621 SUPERFAMILY SSF52440 380 510 1.55E-36 T 28-03-2018 IPR016185 Pre-ATP-grasp domain AM393_RS08920 b74dfe99756788913a5fbdc0963409a1 198 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 1 190 3.5E-72 T 28-03-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 AM393_RS08920 b74dfe99756788913a5fbdc0963409a1 198 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 124 130 - T 28-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AM393_RS08920 b74dfe99756788913a5fbdc0963409a1 198 Gene3D G3DSA:3.40.50.150 1 198 1.1E-33 T 28-03-2018 AM393_RS08920 b74dfe99756788913a5fbdc0963409a1 198 PIRSF PIRSF004553 11 191 1.8E-60 T 28-03-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 AM393_RS08920 b74dfe99756788913a5fbdc0963409a1 198 Pfam PF03602 Conserved hypothetical protein 95 12 188 1.6E-61 T 28-03-2018 AM393_RS08920 b74dfe99756788913a5fbdc0963409a1 198 SUPERFAMILY SSF53335 11 189 9.1E-51 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM393_RS02130 6f2d25c69625e4073dff25ff7366f519 132 Pfam PF03788 LrgA family 23 113 1.1E-29 T 28-03-2018 IPR005538 LrgA/CidA family GO:0016021 AM393_RS02130 6f2d25c69625e4073dff25ff7366f519 132 Hamap MF_01144 UPF0299 membrane protein YohJ [yohJ]. 4 123 23.453 T 28-03-2018 IPR022957 Uncharacterised protein family UPF0299 AM393_RS22590 9d12ba722ee7fcc8062a0a62d0cd1a5c 146 Pfam PF03724 META domain 28 138 2.2E-20 T 28-03-2018 IPR005184 Domain of unknown function DUF306, Meta/HslJ AM393_RS28110 0a6dc0e1e561593e5ac3bd436796af88 128 SUPERFAMILY SSF54637 1 116 7.24E-17 T 28-03-2018 IPR029069 HotDog domain AM393_RS28110 0a6dc0e1e561593e5ac3bd436796af88 128 Gene3D G3DSA:3.10.129.10 1 128 1.7E-10 T 28-03-2018 AM393_RS10075 bbf5c23148ae5b31b7d917fc7dde3769 246 SUPERFAMILY SSF102588 8 245 5.49E-52 T 28-03-2018 IPR024078 Putative deacetylase LmbE-like domain Reactome: R-HSA-162710 AM393_RS10075 bbf5c23148ae5b31b7d917fc7dde3769 246 Pfam PF02585 GlcNAc-PI de-N-acetylase 11 139 4.1E-23 T 28-03-2018 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 AM393_RS10075 bbf5c23148ae5b31b7d917fc7dde3769 246 Gene3D G3DSA:3.40.50.10320 5 244 5.1E-37 T 28-03-2018 IPR024078 Putative deacetylase LmbE-like domain Reactome: R-HSA-162710 AM393_RS00610 b902b174e58835d4fc78622e4d631835 219 Pfam PF04391 Protein of unknown function (DUF533) 32 210 3.4E-50 T 28-03-2018 IPR007486 Inner membrane protein YebE AM393_RS00610 b902b174e58835d4fc78622e4d631835 219 SUPERFAMILY SSF158682 93 211 3.66E-16 T 28-03-2018 AM393_RS00610 b902b174e58835d4fc78622e4d631835 219 Gene3D G3DSA:1.10.3680.10 73 218 4.9E-15 T 28-03-2018 IPR029024 TerB-like AM393_RS26715 d106bfa0c59f71ac26647494f4d72401 225 Pfam PF02665 Nitrate reductase gamma subunit 5 224 5.9E-80 T 28-03-2018 IPR023234 NarG-like domain AM393_RS26715 d106bfa0c59f71ac26647494f4d72401 225 Gene3D G3DSA:1.20.950.20 1 216 9.4E-44 T 28-03-2018 AM393_RS26715 d106bfa0c59f71ac26647494f4d72401 225 SUPERFAMILY SSF103501 1 224 1.1E-70 T 28-03-2018 IPR023234 NarG-like domain AM393_RS26715 d106bfa0c59f71ac26647494f4d72401 225 TIGRFAM TIGR00351 narI: respiratory nitrate reductase, gamma subunit 1 225 7.0E-124 T 28-03-2018 IPR003816 Nitrate reductase, gamma subunit GO:0008940|GO:0009325|GO:0055114 KEGG: 00910+1.7.99.4 AM393_RS09975 12e33572ccf7919d116f53ffe1c7d89e 178 Gene3D G3DSA:1.20.5.810 10 43 3.2E-8 T 28-03-2018 AM393_RS09975 12e33572ccf7919d116f53ffe1c7d89e 178 Pfam PF02627 Carboxymuconolactone decarboxylase family 51 104 1.7E-12 T 28-03-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AM393_RS09975 12e33572ccf7919d116f53ffe1c7d89e 178 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 58 105 1.3E-11 T 28-03-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AM393_RS09975 12e33572ccf7919d116f53ffe1c7d89e 178 SUPERFAMILY SSF69118 1 176 4.63E-45 T 28-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AM393_RS09975 12e33572ccf7919d116f53ffe1c7d89e 178 TIGRFAM TIGR01926 peroxid_rel: uncharacterized peroxidase-related enzyme 2 171 7.2E-25 T 28-03-2018 IPR010195 Uncharacterised peroxidase-related AM393_RS09975 12e33572ccf7919d116f53ffe1c7d89e 178 Gene3D G3DSA:1.20.1290.10 44 172 5.0E-27 T 28-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AM393_RS12420 3c83fa29980ed5eddc71e61ec2b7680c 354 PIRSF PIRSF007313 1 354 4.9E-160 T 28-03-2018 IPR008773 Phosphonate metabolism protein PhnI GO:0019634 AM393_RS12420 3c83fa29980ed5eddc71e61ec2b7680c 354 Pfam PF05861 Bacterial phosphonate metabolism protein (PhnI) 1 350 2.9E-154 T 28-03-2018 IPR008773 Phosphonate metabolism protein PhnI GO:0019634 AM393_RS10060 022ef6525d87ba6b5baf2da67eec0d61 287 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 2 137 9.9E-9 T 28-03-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 AM393_RS10060 022ef6525d87ba6b5baf2da67eec0d61 287 Gene3D G3DSA:1.10.1040.10 170 287 8.3E-32 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AM393_RS10060 022ef6525d87ba6b5baf2da67eec0d61 287 Gene3D G3DSA:3.40.50.720 1 167 2.1E-24 T 28-03-2018 AM393_RS10060 022ef6525d87ba6b5baf2da67eec0d61 287 PIRSF PIRSF000103 1 268 5.5E-25 T 28-03-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 AM393_RS10060 022ef6525d87ba6b5baf2da67eec0d61 287 SUPERFAMILY SSF48179 161 272 6.01E-28 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AM393_RS10060 022ef6525d87ba6b5baf2da67eec0d61 287 Pfam PF09130 Domain of unknown function (DUF1932) 188 259 1.1E-17 T 28-03-2018 IPR015814 Phosphogluconate dehydrogenase, NAD-binding, putative, C-terminal AM393_RS10060 022ef6525d87ba6b5baf2da67eec0d61 287 SUPERFAMILY SSF51735 1 155 9.51E-35 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS04215 87feff6a95b694399a409d0640c0aca8 181 SUPERFAMILY SSF52821 2 154 1.44E-28 T 28-03-2018 IPR001763 Rhodanese-like domain AM393_RS04215 87feff6a95b694399a409d0640c0aca8 181 Pfam PF00581 Rhodanese-like domain 7 99 3.1E-12 T 28-03-2018 IPR001763 Rhodanese-like domain AM393_RS04215 87feff6a95b694399a409d0640c0aca8 181 SMART SM00450 5 102 8.1E-16 T 28-03-2018 IPR001763 Rhodanese-like domain AM393_RS04215 87feff6a95b694399a409d0640c0aca8 181 Pfam PF11127 Protein of unknown function (DUF2892) 115 172 2.7E-11 T 28-03-2018 IPR021309 Protein of unknown function DUF2892 AM393_RS04215 87feff6a95b694399a409d0640c0aca8 181 Gene3D G3DSA:3.40.250.10 2 123 2.5E-22 T 28-03-2018 IPR001763 Rhodanese-like domain AM393_RS10215 9ec780e20978f8928fd35d85ca1575da 29 TIGRFAM TIGR04459 TisB_tox: type I toxin-antitoxin system toxin TisB 1 29 2.9E-20 T 28-03-2018 IPR025211 Toxin TisB, type I toxin-antitoxin system GO:0005253|GO:0005887|GO:0009432|GO:0022611 AM393_RS10215 9ec780e20978f8928fd35d85ca1575da 29 Pfam PF13939 Toxin TisB, type I toxin-antitoxin system 1 26 1.0E-10 T 28-03-2018 IPR025211 Toxin TisB, type I toxin-antitoxin system GO:0005253|GO:0005887|GO:0009432|GO:0022611 AM393_RS15700 470ff34f03af2303fd9fa91bae1fd33a 422 Pfam PF01266 FAD dependent oxidoreductase 3 390 2.4E-68 T 28-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AM393_RS15700 470ff34f03af2303fd9fa91bae1fd33a 422 SUPERFAMILY SSF51905 1 285 2.89E-51 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS15700 470ff34f03af2303fd9fa91bae1fd33a 422 Gene3D G3DSA:3.50.50.60 2 85 0.017 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM393_RS15700 470ff34f03af2303fd9fa91bae1fd33a 422 Hamap MF_00990 L-2-hydroxyglutarate oxidase LhgO [lhgO]. 1 422 92.745 T 28-03-2018 IPR030862 L-2-hydroxyglutarate oxidase LhgO GO:0034419 KEGG: 00630+1.1.3.15|MetaCyc: PWY-181 AM393_RS15700 470ff34f03af2303fd9fa91bae1fd33a 422 Gene3D G3DSA:3.30.9.10 202 352 7.3E-19 T 28-03-2018 AM393_RS15700 470ff34f03af2303fd9fa91bae1fd33a 422 Gene3D G3DSA:3.30.9.10 87 201 1.9E-17 T 28-03-2018 AM393_RS23150 d50428e461c2a3434f03e65cdff8af31 551 SUPERFAMILY SSF100950 232 488 5.44E-22 T 28-03-2018 AM393_RS23150 d50428e461c2a3434f03e65cdff8af31 551 Pfam PF16957 Malonate decarboxylase, alpha subunit, transporter 11 551 6.8E-296 T 28-03-2018 IPR005777 Acetyl-S-ACP:malonate ACP transferase MetaCyc: PWY-5794|MetaCyc: PWY-6060 AM393_RS23150 d50428e461c2a3434f03e65cdff8af31 551 Gene3D G3DSA:3.40.1080.10 232 524 6.4E-42 T 28-03-2018 AM393_RS23150 d50428e461c2a3434f03e65cdff8af31 551 SUPERFAMILY SSF100950 40 280 1.47E-37 T 28-03-2018 AM393_RS23150 d50428e461c2a3434f03e65cdff8af31 551 TIGRFAM TIGR01110 mdcA: malonate decarboxylase, alpha subunit 11 551 0.0 T 28-03-2018 IPR005777 Acetyl-S-ACP:malonate ACP transferase MetaCyc: PWY-5794|MetaCyc: PWY-6060 AM393_RS23150 d50428e461c2a3434f03e65cdff8af31 551 Gene3D G3DSA:3.40.1080.10 1 218 7.9E-35 T 28-03-2018 AM393_RS28415 19ffdaa84bcd63ea0f525277884474bd 291 Gene3D G3DSA:1.10.10.10 79 191 6.7E-4 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS05620 cd0849e9eb57d46bf5054f768a52bb68 331 SUPERFAMILY SSF49401 186 331 1.99E-20 T 28-03-2018 IPR008966 Adhesion domain AM393_RS05620 cd0849e9eb57d46bf5054f768a52bb68 331 Gene3D G3DSA:2.60.40.1090 185 331 8.4E-26 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM393_RS05620 cd0849e9eb57d46bf5054f768a52bb68 331 Gene3D G3DSA:2.60.40.1090 52 162 0.34 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM393_RS05620 cd0849e9eb57d46bf5054f768a52bb68 331 Pfam PF00419 Fimbrial protein 182 330 1.1E-14 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM393_RS13845 fc30f413cf7e7af7ff35445d5b5b1d1c 456 Gene3D G3DSA:3.40.309.10 245 438 1.8E-70 T 28-03-2018 AM393_RS13845 fc30f413cf7e7af7ff35445d5b5b1d1c 456 SUPERFAMILY SSF53720 3 455 6.54E-146 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AM393_RS13845 fc30f413cf7e7af7ff35445d5b5b1d1c 456 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 256 267 - T 28-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 AM393_RS13845 fc30f413cf7e7af7ff35445d5b5b1d1c 456 Pfam PF00171 Aldehyde dehydrogenase family 3 452 2.4E-139 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AM393_RS13845 fc30f413cf7e7af7ff35445d5b5b1d1c 456 Gene3D G3DSA:3.40.605.10 1 244 9.6E-67 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AM393_RS13845 fc30f413cf7e7af7ff35445d5b5b1d1c 456 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 228 235 - T 28-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 AM393_RS02055 880914cc8efa0e1c545ba16e76d84381 385 Gene3D G3DSA:1.10.3720.10 167 381 5.1E-23 T 28-03-2018 AM393_RS02055 880914cc8efa0e1c545ba16e76d84381 385 SUPERFAMILY SSF161098 174 371 5.63E-31 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS02055 880914cc8efa0e1c545ba16e76d84381 385 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 192 373 1.2E-19 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS00125 88b5b3a7ed5baa5826b83b7cae0d56b1 268 Gene3D G3DSA:3.40.190.10 159 253 0.11 T 28-03-2018 AM393_RS00125 88b5b3a7ed5baa5826b83b7cae0d56b1 268 Gene3D G3DSA:3.40.190.10 25 152 2.0E-15 T 28-03-2018 AM393_RS00125 88b5b3a7ed5baa5826b83b7cae0d56b1 268 Pfam PF13531 Bacterial extracellular solute-binding protein 26 253 6.3E-40 T 28-03-2018 AM393_RS00125 88b5b3a7ed5baa5826b83b7cae0d56b1 268 SUPERFAMILY SSF53850 25 253 1.61E-37 T 28-03-2018 AM393_RS21655 78699b90ad1d0ea27636e7921c566d5c 302 Pfam PF00892 EamA-like transporter family 149 289 6.4E-13 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM393_RS21655 78699b90ad1d0ea27636e7921c566d5c 302 Pfam PF00892 EamA-like transporter family 9 136 2.3E-14 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM393_RS21655 78699b90ad1d0ea27636e7921c566d5c 302 SUPERFAMILY SSF103481 38 139 2.75E-10 T 28-03-2018 AM393_RS21655 78699b90ad1d0ea27636e7921c566d5c 302 SUPERFAMILY SSF103481 190 295 1.2E-13 T 28-03-2018 AM393_RS17865 025a36e7fd2fe31c691b1ffa76c181ee 231 SUPERFAMILY SSF55729 28 197 1.27E-33 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM393_RS17865 025a36e7fd2fe31c691b1ffa76c181ee 231 Pfam PF13302 Acetyltransferase (GNAT) domain 36 172 4.1E-16 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AM393_RS17865 025a36e7fd2fe31c691b1ffa76c181ee 231 Gene3D G3DSA:3.40.630.30 23 219 4.3E-23 T 28-03-2018 AM393_RS13800 83c58d283afa51fcb07573ab4238158a 255 TIGRFAM TIGR00241 CoA_E_activ: putative CoA-substrate-specific enzyme activase 3 247 1.8E-100 T 28-03-2018 IPR008275 CoA enzyme activase AM393_RS13800 83c58d283afa51fcb07573ab4238158a 255 Gene3D G3DSA:3.30.420.40 1 85 0.0011 T 28-03-2018 AM393_RS13800 83c58d283afa51fcb07573ab4238158a 255 SUPERFAMILY SSF53067 3 250 3.68E-30 T 28-03-2018 AM393_RS13800 83c58d283afa51fcb07573ab4238158a 255 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 5 248 2.8E-66 T 28-03-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 AM393_RS13800 83c58d283afa51fcb07573ab4238158a 255 Gene3D G3DSA:3.30.420.40 92 233 1.7E-32 T 28-03-2018 AM393_RS15715 96ea4be90a62e76b85da7cb1ce0f55af 85 Pfam PF09857 Putative toxin of bacterial toxin-antitoxin pair 1 85 4.0E-42 T 28-03-2018 IPR018654 Putative toxin of bacterial toxin-antitoxin pair AM393_RS15715 96ea4be90a62e76b85da7cb1ce0f55af 85 Hamap MF_00827 UPF0386 protein YjhX [yjhX]. 1 85 29.653 T 28-03-2018 IPR018654 Putative toxin of bacterial toxin-antitoxin pair AM393_RS10465 4155e4af6e85c5c13e1a7666bd02875c 257 Pfam PF00005 ABC transporter 26 181 1.5E-34 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS10465 4155e4af6e85c5c13e1a7666bd02875c 257 Gene3D G3DSA:3.40.50.300 9 255 1.0E-63 T 28-03-2018 AM393_RS10465 4155e4af6e85c5c13e1a7666bd02875c 257 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 11 257 1.9E-121 T 28-03-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 AM393_RS10465 4155e4af6e85c5c13e1a7666bd02875c 257 SUPERFAMILY SSF52540 11 243 6.17E-61 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS10465 4155e4af6e85c5c13e1a7666bd02875c 257 SMART SM00382 35 237 1.1E-10 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS10465 4155e4af6e85c5c13e1a7666bd02875c 257 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS27435 c29fc152d7f672c92992e620b4d35510 65 Pfam PF11666 Protein of unknown function (DUF2933) 10 60 5.9E-24 T 28-03-2018 IPR021682 Protein of unknown function DUF2933 AM393_RS07995 bbec932eaa04b475792994462b701ad4 413 TIGRFAM TIGR01537 portal_HK97: phage portal protein, HK97 family 42 388 1.1E-75 T 28-03-2018 IPR006427 Phage portal protein, HK97 AM393_RS07995 bbec932eaa04b475792994462b701ad4 413 Pfam PF04860 Phage portal protein 48 382 2.8E-91 T 28-03-2018 IPR006944 Bacteriophage/Gene transfer agent portal protein AM393_RS21855 1257142424f3fa3f0ec11320945d0c8a 74 TIGRFAM TIGR02976 phageshock_pspB: phage shock protein B 1 74 2.8E-31 T 28-03-2018 IPR009554 Phage shock protein B GO:0006355|GO:0009271 AM393_RS21855 1257142424f3fa3f0ec11320945d0c8a 74 Pfam PF06667 Phage shock protein B 3 73 7.1E-31 T 28-03-2018 IPR009554 Phage shock protein B GO:0006355|GO:0009271 AM393_RS12480 8f24095cc362b7c428b77c655acfa3d3 318 SUPERFAMILY SSF53067 1 154 4.73E-44 T 28-03-2018 AM393_RS12480 8f24095cc362b7c428b77c655acfa3d3 318 Gene3D G3DSA:3.30.420.40 1 163 5.9E-31 T 28-03-2018 AM393_RS12480 8f24095cc362b7c428b77c655acfa3d3 318 Pfam PF06406 StbA protein 1 314 5.9E-126 T 28-03-2018 IPR009440 Plasmid segregation protein ParM/StbA AM393_RS12480 8f24095cc362b7c428b77c655acfa3d3 318 Gene3D G3DSA:3.30.420.40 164 302 4.8E-15 T 28-03-2018 AM393_RS12480 8f24095cc362b7c428b77c655acfa3d3 318 SUPERFAMILY SSF53067 159 317 6.35E-17 T 28-03-2018 AM393_RS01715 b190fcd8aa61071388acd8f73c6373d1 255 Pfam PF01061 ABC-2 type transporter 12 213 4.4E-16 T 28-03-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 AM393_RS02410 13d136802772016160f6ca8c61540655 437 SUPERFAMILY SSF81301 2 131 3.52E-20 T 28-03-2018 AM393_RS02410 13d136802772016160f6ca8c61540655 437 Gene3D G3DSA:3.30.460.10 16 154 3.6E-17 T 28-03-2018 AM393_RS22610 ed7aef7a5b0bf8de5afa6c0d198ee22e 61 Pfam PF13617 YnbE-like lipoprotein 4 59 4.3E-29 T 28-03-2018 IPR025985 YnbE-like lipoprotein AM393_RS22610 ed7aef7a5b0bf8de5afa6c0d198ee22e 61 ProDom PD052969 LIPOPROTEIN PRECURSOR SIGNAL YNBE MEMBRANE OUTER POSSIBLE SIMILAR ECS2004 SO2063 16 61 1.0E-17 T 28-03-2018 AM393_RS05740 e7fdf0289edae76ce743caa2ba8e07d5 645 Pfam PF04632 Fusaric acid resistance protein family 19 640 6.8E-76 T 28-03-2018 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 AM393_RS06465 bb2039e6e49c6c40764bb7155bd940c9 224 SUPERFAMILY SSF53271 167 207 4.54E-9 T 28-03-2018 IPR029057 Phosphoribosyltransferase-like AM393_RS06465 bb2039e6e49c6c40764bb7155bd940c9 224 SUPERFAMILY SSF53271 20 134 4.54E-9 T 28-03-2018 IPR029057 Phosphoribosyltransferase-like AM393_RS06465 bb2039e6e49c6c40764bb7155bd940c9 224 Gene3D G3DSA:3.40.50.2020 4 223 2.0E-11 T 28-03-2018 AM393_RS19495 58ce7309f2a4c474f067ce20c9604b4c 101 Pfam PF06183 DinI-like family 38 100 2.3E-21 T 28-03-2018 IPR010391 DNA damage-inducible protein DinI-like AM393_RS19495 58ce7309f2a4c474f067ce20c9604b4c 101 Gene3D G3DSA:3.30.910.10 25 100 7.9E-28 T 28-03-2018 IPR010391 DNA damage-inducible protein DinI-like AM393_RS19495 58ce7309f2a4c474f067ce20c9604b4c 101 SUPERFAMILY SSF54857 25 101 1.7E-21 T 28-03-2018 IPR010391 DNA damage-inducible protein DinI-like AM393_RS29145 999ee4caa6db0cdcf530cacea407f162 530 Pfam PF03050 Transposase IS66 family 190 479 4.0E-97 T 28-03-2018 IPR004291 Transposase, IS66 AM393_RS29145 999ee4caa6db0cdcf530cacea407f162 530 Pfam PF13007 Transposase C of IS166 homeodomain 53 123 8.8E-12 T 28-03-2018 IPR024463 Transposase TnpC, homeodomain AM393_RS29145 999ee4caa6db0cdcf530cacea407f162 530 Gene3D G3DSA:1.20.5.340 3 128 1.5E-4 T 28-03-2018 AM393_RS29145 999ee4caa6db0cdcf530cacea407f162 530 Pfam PF13817 IS66 C-terminal element 487 523 1.4E-14 T 28-03-2018 AM393_RS29145 999ee4caa6db0cdcf530cacea407f162 530 Pfam PF13005 zinc-finger binding domain of transposase IS66 131 175 7.1E-10 T 28-03-2018 IPR024474 Zinc-finger binding domain of transposase IS66 AM393_RS02220 ed90492b20627e4c043f5e88125e2109 349 Pfam PF03601 Conserved hypothetical protein 698 18 326 5.4E-112 T 28-03-2018 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 AM393_RS02220 ed90492b20627e4c043f5e88125e2109 349 TIGRFAM TIGR00698 TIGR00698: conserved hypothetical protein 14 347 2.1E-153 T 28-03-2018 IPR004630 Uncharacterised protein family UPF0324, bacteria GO:0016021 AM393_RS18250 90f04b467b9b345870edd27f5fc158ec 457 TIGRFAM TIGR00771 DcuC: transporter, anaerobic C4-dicarboxylate uptake C (DcuC) family 58 441 1.5E-187 T 28-03-2018 IPR004669 C4-dicarboxylate anaerobic carrier GO:0015556|GO:0015740|GO:0016021 AM393_RS18250 90f04b467b9b345870edd27f5fc158ec 457 Pfam PF03606 C4-dicarboxylate anaerobic carrier 6 451 7.6E-132 T 28-03-2018 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 AM393_RS13820 289d6c88f0bfa13d53ff78914cf26ae6 430 Gene3D G3DSA:1.10.357.10 12 170 0.23 T 28-03-2018 AM393_RS13820 289d6c88f0bfa13d53ff78914cf26ae6 430 Pfam PF04286 Protein of unknown function (DUF445) 49 421 1.3E-109 T 28-03-2018 IPR007383 Protein of unknown function DUF445 AM393_RS13820 289d6c88f0bfa13d53ff78914cf26ae6 430 Gene3D G3DSA:1.20.120.20 236 381 5.8E-6 T 28-03-2018 AM393_RS20470 05fb5e47fc9e51512d7b2210757075b1 212 Pfam PF00440 Bacterial regulatory proteins, tetR family 23 69 1.6E-14 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM393_RS20470 05fb5e47fc9e51512d7b2210757075b1 212 Gene3D G3DSA:1.10.260.40 45 74 4.1E-10 T 28-03-2018 AM393_RS20470 05fb5e47fc9e51512d7b2210757075b1 212 Pfam PF08362 YcdC-like protein, C-terminal region 70 211 7.2E-59 T 28-03-2018 IPR013573 Transcription regulator YcdC, C-terminal GO:0045892 AM393_RS20470 05fb5e47fc9e51512d7b2210757075b1 212 Gene3D G3DSA:1.10.357.10 75 212 8.7E-26 T 28-03-2018 AM393_RS20470 05fb5e47fc9e51512d7b2210757075b1 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 23 36 2.9E-8 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM393_RS20470 05fb5e47fc9e51512d7b2210757075b1 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 44 67 2.9E-8 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM393_RS20470 05fb5e47fc9e51512d7b2210757075b1 212 SUPERFAMILY SSF48498 87 211 7.12E-42 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AM393_RS20470 05fb5e47fc9e51512d7b2210757075b1 212 Gene3D G3DSA:1.10.10.60 2 44 1.8E-12 T 28-03-2018 AM393_RS20470 05fb5e47fc9e51512d7b2210757075b1 212 SUPERFAMILY SSF46689 17 91 5.49E-19 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS13065 b042f01bca3e181b2356c60c6edeffd6 332 Gene3D G3DSA:1.10.3470.10 30 310 3.0E-27 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AM393_RS13065 b042f01bca3e181b2356c60c6edeffd6 332 Pfam PF02653 Branched-chain amino acid transport system / permease component 35 304 7.1E-42 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AM393_RS06985 a69f249f7afbd0def908a0140ea4da34 191 Pfam PF03729 Short repeat of unknown function (DUF308) 26 97 2.2E-10 T 28-03-2018 IPR005325 Protein of unknown function DUF308, membrane AM393_RS06985 a69f249f7afbd0def908a0140ea4da34 191 Pfam PF03729 Short repeat of unknown function (DUF308) 87 152 8.0E-10 T 28-03-2018 IPR005325 Protein of unknown function DUF308, membrane AM393_RS21560 1fc70656a8e0a635a96a2c06c60ed143 137 Pfam PF03692 Putative zinc- or iron-chelating domain 6 98 2.5E-11 T 28-03-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein AM393_RS02405 a98a93b57bbbab19b6362ce3b8423aa5 91 SUPERFAMILY SSF57783 10 46 2.27E-5 T 28-03-2018 AM393_RS06210 ecd3c2f9d65a407ea92dcea9e083e0e8 197 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 3 194 1.5E-70 T 28-03-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 Reactome: R-HSA-74259 AM393_RS06210 ecd3c2f9d65a407ea92dcea9e083e0e8 197 Hamap MF_01405 dITP/XTP pyrophosphatase [rdgB]. 2 196 51.36 T 28-03-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 AM393_RS06210 ecd3c2f9d65a407ea92dcea9e083e0e8 197 SUPERFAMILY SSF52972 1 195 1.31E-74 T 28-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AM393_RS06210 ecd3c2f9d65a407ea92dcea9e083e0e8 197 Pfam PF01725 Ham1 family 4 192 1.7E-57 T 28-03-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 Reactome: R-HSA-74259 AM393_RS06210 ecd3c2f9d65a407ea92dcea9e083e0e8 197 Gene3D G3DSA:3.90.950.10 1 197 1.4E-80 T 28-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AM393_RS01835 f3f0348fd3506344ca21548385cc4f4a 615 Pfam PF13502 AsmA-like C-terminal region 356 540 1.8E-20 T 28-03-2018 IPR032712 AsmA-like, C-terminal AM393_RS01835 f3f0348fd3506344ca21548385cc4f4a 615 Pfam PF05170 AsmA family 2 212 2.8E-15 T 28-03-2018 IPR007844 AsmA AM393_RS24480 16df1baa5b82e512b0887d7b365b7246 246 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 67 238 8.1E-25 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS24480 16df1baa5b82e512b0887d7b365b7246 246 SUPERFAMILY SSF161098 48 233 1.83E-25 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS24480 16df1baa5b82e512b0887d7b365b7246 246 Gene3D G3DSA:1.10.3720.10 8 244 3.1E-18 T 28-03-2018 AM393_RS08540 b2137d56f78aec7b8a74e1a2803d4a68 428 Pfam PF05036 Sporulation related domain 344 417 1.0E-11 T 28-03-2018 IPR007730 Sporulation-related domain GO:0042834 AM393_RS08540 b2137d56f78aec7b8a74e1a2803d4a68 428 Hamap MF_02021 Cell division protein DamX [damX]. 1 428 24.983 T 28-03-2018 IPR032899 Cell division protein DamX GO:0030428|GO:0032506 AM393_RS08540 b2137d56f78aec7b8a74e1a2803d4a68 428 Gene3D G3DSA:3.30.70.1070 346 411 6.3E-5 T 28-03-2018 IPR007730 Sporulation-related domain GO:0042834 AM393_RS08540 b2137d56f78aec7b8a74e1a2803d4a68 428 SUPERFAMILY SSF110997 344 408 1.19E-6 T 28-03-2018 IPR007730 Sporulation-related domain GO:0042834 AM393_RS26120 785cfe08ca3f424d15cbdce54efe04b6 273 SMART SM00382 36 225 3.3E-13 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS26120 785cfe08ca3f424d15cbdce54efe04b6 273 Gene3D G3DSA:3.40.50.300 8 253 3.8E-54 T 28-03-2018 AM393_RS26120 785cfe08ca3f424d15cbdce54efe04b6 273 SUPERFAMILY SSF52540 6 232 1.01E-57 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS26120 785cfe08ca3f424d15cbdce54efe04b6 273 Pfam PF00005 ABC transporter 28 175 9.0E-29 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS16090 6f640352e6f180ca15be83dba7a2c6ac 227 Pfam PF06904 Extensin-like protein C-terminus 54 226 1.0E-53 T 28-03-2018 IPR009683 Extensin-like, C-terminal AM393_RS18515 e0faea626ec024a29f3724f56c5acf82 110 Pfam PF13982 YbfN-like lipoprotein 21 107 1.6E-48 T 28-03-2018 IPR025727 YbfN-like lipoprotein AM393_RS16825 bdebb645502e87818edb638a1aaf9a26 225 Pfam PF00005 ABC transporter 23 166 3.8E-31 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM393_RS16825 bdebb645502e87818edb638a1aaf9a26 225 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM393_RS16825 bdebb645502e87818edb638a1aaf9a26 225 SUPERFAMILY SSF52540 5 211 8.34E-54 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS16825 bdebb645502e87818edb638a1aaf9a26 225 SMART SM00382 32 214 1.5E-15 T 28-03-2018 IPR003593 AAA+ ATPase domain AM393_RS16825 bdebb645502e87818edb638a1aaf9a26 225 Gene3D G3DSA:3.40.50.300 4 223 1.1E-57 T 28-03-2018 AM393_RS24170 3d467e74eb6b1aa7107a8b59e1c892e1 368 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 15 342 1.3E-59 T 28-03-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 AM393_RS23815 c90780310663313a97f42bddc17fc391 72 Pfam PF11903 ParD-like antitoxin of type II bacterial toxin-antitoxin system 1 61 7.3E-25 T 28-03-2018 IPR021831 ParD-like antitoxin of type II bacterial toxin-antitoxin system AM393_RS15785 cdc322908bd632c8d843152ea9c0080c 319 Gene3D G3DSA:3.40.50.970 1 319 6.7E-79 T 28-03-2018 AM393_RS15785 cdc322908bd632c8d843152ea9c0080c 319 Pfam PF00676 Dehydrogenase E1 component 12 308 4.6E-83 T 28-03-2018 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 Reactome: R-HSA-389661 AM393_RS15785 cdc322908bd632c8d843152ea9c0080c 319 SUPERFAMILY SSF52518 3 318 4.24E-91 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold AM393_RS23365 bc1faa82775f7077ce23b4df20ea6774 260 Pfam PF01261 Xylose isomerase-like TIM barrel 21 219 9.9E-36 T 28-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AM393_RS23365 bc1faa82775f7077ce23b4df20ea6774 260 PIRSF PIRSF006241 1 260 5.7E-90 T 28-03-2018 IPR026040 Hydroxypyruvate isomerase-like KEGG: 00630+5.3.1.22 AM393_RS23365 bc1faa82775f7077ce23b4df20ea6774 260 SUPERFAMILY SSF51658 1 259 3.45E-83 T 28-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AM393_RS23365 bc1faa82775f7077ce23b4df20ea6774 260 Gene3D G3DSA:3.20.20.150 1 260 7.1E-55 T 28-03-2018 AM393_RS07020 59882072b26d8d7ddcab893f6c30e060 142 SUPERFAMILY SSF143744 3 139 4.18E-40 T 28-03-2018 AM393_RS07020 59882072b26d8d7ddcab893f6c30e060 142 Pfam PF03928 Haem-degrading 10 136 2.9E-30 T 28-03-2018 IPR005624 Haem-degrading AM393_RS13840 8843e592428aa4e9e113fc8208f9f7a7 308 Pfam PF04754 Putative transposase, YhgA-like 8 209 2.9E-89 T 28-03-2018 IPR006842 Transposase (putative), YhgA-like AM393_RS13840 8843e592428aa4e9e113fc8208f9f7a7 308 Gene3D G3DSA:1.10.10.60 254 305 1.2E-5 T 28-03-2018 AM393_RS13840 8843e592428aa4e9e113fc8208f9f7a7 308 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 9 304 4.7E-55 T 28-03-2018 IPR010106 Recombination-promoting nuclease RpnA AM393_RS24160 5f5904cc55932e536c2ae98bfc150c24 402 Gene3D G3DSA:1.20.1250.20 7 199 1.1E-26 T 28-03-2018 AM393_RS24160 5f5904cc55932e536c2ae98bfc150c24 402 Gene3D G3DSA:1.20.1250.20 203 390 2.0E-5 T 28-03-2018 AM393_RS24160 5f5904cc55932e536c2ae98bfc150c24 402 Pfam PF07690 Major Facilitator Superfamily 20 196 5.0E-27 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS24160 5f5904cc55932e536c2ae98bfc150c24 402 SUPERFAMILY SSF103473 9 395 1.96E-38 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS07855 7e9b35e7f5879402b88237dc18de0c45 1265 TIGRFAM TIGR02099 TIGR02099: TIGR02099 family protein 2 1261 0.0 T 28-03-2018 IPR011836 Conserved hypothetical protein CHP02099 AM393_RS07855 7e9b35e7f5879402b88237dc18de0c45 1265 Pfam PF13116 Protein of unknown function 506 789 3.1E-98 T 28-03-2018 IPR025263 Domain of unknown function DUF3971 AM393_RS07855 7e9b35e7f5879402b88237dc18de0c45 1265 Pfam PF13502 AsmA-like C-terminal region 1009 1251 3.3E-61 T 28-03-2018 IPR032712 AsmA-like, C-terminal AM393_RS06140 d5b17c5d7a7dc8d37953ab82fb8ffe4f 103 Pfam PF10885 Protein of unknown function (DUF2684) 1 71 4.5E-19 T 28-03-2018 IPR020263 Uncharacterised protein family YqgD AM393_RS06140 d5b17c5d7a7dc8d37953ab82fb8ffe4f 103 ProDom PD060540 YQGD INNER MEMBRANE ECS3817 1 62 1.0E-10 T 28-03-2018 IPR020263 Uncharacterised protein family YqgD AM393_RS08765 fd4c04c45e930a4d77dc7fa201557f59 446 PIRSF PIRSF002746 1 446 7.7E-155 T 28-03-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 AM393_RS08765 fd4c04c45e930a4d77dc7fa201557f59 446 Pfam PF02447 GntP family permease 5 441 5.0E-166 T 28-03-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 AM393_RS08765 fd4c04c45e930a4d77dc7fa201557f59 446 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 4 444 1.4E-175 T 28-03-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 AM393_RS06450 39864836e491066cb3444019e14a78c0 117 TIGRFAM TIGR03745 conj_TIGR03745: integrating conjugative element membrane protein, PFL_4702 family 14 115 6.1E-33 T 28-03-2018 IPR021356 Integrating conjugative element protein PFL4702 AM393_RS06450 39864836e491066cb3444019e14a78c0 117 Pfam PF11190 Protein of unknown function (DUF2976) 28 114 3.7E-31 T 28-03-2018 IPR021356 Integrating conjugative element protein PFL4702 AM393_RS20515 7bceabb4061e927aa724ec8ab4ad0310 352 Pfam PF02562 PhoH-like protein 147 351 4.3E-77 T 28-03-2018 IPR003714 PhoH-like protein GO:0005524 AM393_RS20515 7bceabb4061e927aa724ec8ab4ad0310 352 SUPERFAMILY SSF52540 146 329 1.91E-31 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS20515 7bceabb4061e927aa724ec8ab4ad0310 352 Gene3D G3DSA:3.40.50.300 143 350 1.0E-21 T 28-03-2018 AM393_RS18140 90d5c143d7ef18f5e2a8ace5582a8a2a 420 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 21 384 6.4E-12 T 28-03-2018 IPR001248 Purine-cytosine permease GO:0005215|GO:0016020|GO:0055085 AM393_RS11475 437ab24fbf30f658f657d5c1d1db178a 206 PIRSF PIRSF006324 1 205 1.1E-53 T 28-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AM393_RS11475 437ab24fbf30f658f657d5c1d1db178a 206 Pfam PF01810 LysE type translocator 14 202 7.0E-49 T 28-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AM393_RS11475 437ab24fbf30f658f657d5c1d1db178a 206 TIGRFAM TIGR00949 2A76: homoserine/Threonine efflux protein 19 200 1.1E-57 T 28-03-2018 IPR004778 Homoserine/Threonine efflux protein GO:0016021 AM393_RS16415 349bd10cc35848e6f2e177078eab64a7 110 Gene3D G3DSA:1.20.5.1230 11 110 7.7E-4 T 28-03-2018 AM393_RS22105 b65fc6eb37224d607acadf04db1482e4 106 Pfam PF16518 T3SS negative regulator,GrlR 1 105 9.0E-24 T 28-03-2018 IPR032417 T3SS negative regulator GrlR AM393_RS28375 571a8525bf6b7a1ff03df228aa896606 188 Gene3D G3DSA:2.20.25.10 47 84 0.014 T 28-03-2018 AM393_RS28375 571a8525bf6b7a1ff03df228aa896606 188 Gene3D G3DSA:2.20.25.10 143 179 6.0E-6 T 28-03-2018 AM393_RS28375 571a8525bf6b7a1ff03df228aa896606 188 Gene3D G3DSA:1.10.10.60 1 39 1.3E-5 T 28-03-2018 AM393_RS28375 571a8525bf6b7a1ff03df228aa896606 188 Pfam PF03811 InsA N-terminal domain 139 168 2.0E-7 T 28-03-2018 IPR003220 InsA N-terminal domain GO:0006313 AM393_RS28375 571a8525bf6b7a1ff03df228aa896606 188 Gene3D G3DSA:1.10.10.10 85 142 0.0019 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS04405 c227a9a1d10c36c0b16932eeb64743ad 166 Hamap MF_01114 Regulatory protein RecX [recX]. 10 166 13.982 T 28-03-2018 IPR003783 Regulatory protein RecX GO:0006282 AM393_RS04405 c227a9a1d10c36c0b16932eeb64743ad 166 Gene3D G3DSA:1.10.10.10 70 114 2.1E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS04405 c227a9a1d10c36c0b16932eeb64743ad 166 Pfam PF02631 RecX family 50 162 2.9E-31 T 28-03-2018 IPR003783 Regulatory protein RecX GO:0006282 AM393_RS04405 c227a9a1d10c36c0b16932eeb64743ad 166 Gene3D G3DSA:1.10.10.10 12 69 1.9E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS04405 c227a9a1d10c36c0b16932eeb64743ad 166 Gene3D G3DSA:1.10.10.10 116 166 2.3E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS23840 2921a80b8e9261b508f5b4cb423ae306 147 SUPERFAMILY SSF55804 5 142 1.31E-26 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 AM393_RS23840 2921a80b8e9261b508f5b4cb423ae306 147 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 9 142 1.1E-22 T 28-03-2018 IPR002178 PTS EIIA type-2 domain AM393_RS23840 2921a80b8e9261b508f5b4cb423ae306 147 Gene3D G3DSA:3.40.930.10 3 144 1.1E-25 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 AM393_RS16770 bc1911fe1b9a20d506bff4309d7a1baf 320 Gene3D G3DSA:3.40.50.1400 173 300 2.1E-41 T 28-03-2018 AM393_RS16770 bc1911fe1b9a20d506bff4309d7a1baf 320 Pfam PF00762 Ferrochelatase 5 316 2.5E-109 T 28-03-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 AM393_RS16770 bc1911fe1b9a20d506bff4309d7a1baf 320 Gene3D G3DSA:3.40.50.1400 1 172 1.7E-48 T 28-03-2018 AM393_RS16770 bc1911fe1b9a20d506bff4309d7a1baf 320 ProSitePatterns PS00534 Ferrochelatase signature. 189 207 - T 28-03-2018 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 AM393_RS16770 bc1911fe1b9a20d506bff4309d7a1baf 320 SUPERFAMILY SSF53800 4 317 3.14E-101 T 28-03-2018 AM393_RS16770 bc1911fe1b9a20d506bff4309d7a1baf 320 Hamap MF_00323 Ferrochelatase [hemH]. 4 320 38.099 T 28-03-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 AM393_RS16770 bc1911fe1b9a20d506bff4309d7a1baf 320 TIGRFAM TIGR00109 hemH: ferrochelatase 2 316 4.2E-122 T 28-03-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 AM393_RS16600 8568ce0c0bb0b37ec3a0b66b72c5066e 293 Pfam PF03824 High-affinity nickel-transport protein 13 289 1.8E-45 T 28-03-2018 IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 AM393_RS16600 8568ce0c0bb0b37ec3a0b66b72c5066e 293 Gene3D G3DSA:1.20.1250.20 4 127 2.4E-4 T 28-03-2018 AM393_RS27455 75d5b5ee46f224d08b13ce324c725643 298 Gene3D G3DSA:2.40.128.130 77 294 8.4E-6 T 28-03-2018 AM393_RS27455 75d5b5ee46f224d08b13ce324c725643 298 Pfam PF05275 Copper resistance protein B precursor (CopB) 93 298 3.6E-87 T 28-03-2018 IPR007939 Copper resistance B precursor GO:0005507|GO:0006878|GO:0009279 AM393_RS22815 70337d5a74aa22a5e78278e55650fab2 479 Gene3D G3DSA:3.40.605.10 1 266 6.1E-93 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AM393_RS22815 70337d5a74aa22a5e78278e55650fab2 479 Pfam PF00171 Aldehyde dehydrogenase family 18 475 1.4E-164 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AM393_RS22815 70337d5a74aa22a5e78278e55650fab2 479 SUPERFAMILY SSF53720 4 477 2.62E-159 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AM393_RS22815 70337d5a74aa22a5e78278e55650fab2 479 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 278 289 - T 28-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 AM393_RS22815 70337d5a74aa22a5e78278e55650fab2 479 Gene3D G3DSA:3.40.309.10 267 444 1.7E-65 T 28-03-2018 AM393_RS22815 70337d5a74aa22a5e78278e55650fab2 479 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 250 257 - T 28-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 AM393_RS08135 30f98f96100588889af6e0ce867f904e 190 Hamap MF_01852 Threonylcarbamoyl-AMP synthase [tsaC]. 7 188 41.242 T 28-03-2018 IPR023535 Threonylcarbamoyl-AMP synthase GO:0002949|GO:0005524 AM393_RS08135 30f98f96100588889af6e0ce867f904e 190 Pfam PF01300 Telomere recombination 16 190 1.3E-43 T 28-03-2018 IPR006070 YrdC-like domain GO:0003725 AM393_RS08135 30f98f96100588889af6e0ce867f904e 190 SUPERFAMILY SSF55821 5 187 6.1E-56 T 28-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain AM393_RS08135 30f98f96100588889af6e0ce867f904e 190 Gene3D G3DSA:3.90.870.10 1 188 1.1E-55 T 28-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain AM393_RS25185 f8a0a07e1cc545e51ccce7fee5604846 309 SUPERFAMILY SSF161098 23 303 2.71E-45 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS25185 f8a0a07e1cc545e51ccce7fee5604846 309 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 102 303 6.3E-16 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS25185 f8a0a07e1cc545e51ccce7fee5604846 309 Gene3D G3DSA:1.10.3720.10 24 305 9.3E-36 T 28-03-2018 AM393_RS21325 30b5099290d0f0e8e486e220f6fdab82 213 SUPERFAMILY SSF52499 2 210 1.31E-52 T 28-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AM393_RS21325 30b5099290d0f0e8e486e220f6fdab82 213 Pfam PF00857 Isochorismatase family 5 206 6.4E-34 T 28-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AM393_RS21325 30b5099290d0f0e8e486e220f6fdab82 213 Gene3D G3DSA:3.40.50.850 1 212 8.5E-61 T 28-03-2018 AM393_RS27730 5ac0dfcc163e54138da756d95d610c6c 142 Gene3D G3DSA:2.30.30.110 11 141 1.1E-8 T 28-03-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor AM393_RS27730 5ac0dfcc163e54138da756d95d610c6c 142 SUPERFAMILY SSF50118 12 84 2.62E-5 T 28-03-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor AM393_RS20645 8789bf514bcbe544c9853aeee9582638 37 Pfam PF10968 Protein of unknown function (DUF2770) 1 36 5.2E-20 T 28-03-2018 IPR024494 Protein of unknown function DUF2770 AM393_RS19525 d0fff10e8366de23bcc7005222fc3407 352 Pfam PF05125 Phage major capsid protein, P2 family 9 338 2.1E-148 T 28-03-2018 IPR006441 Bacteriophage P2, GpN, major capsid GO:0019028 AM393_RS19525 d0fff10e8366de23bcc7005222fc3407 352 TIGRFAM TIGR01551 major_capsid_P2: phage major capsid protein, P2 family 7 340 2.3E-99 T 28-03-2018 IPR006441 Bacteriophage P2, GpN, major capsid GO:0019028 AM393_RS14940 ed6dcaf6f97521cf6d3b81f70bee4687 187 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 31 167 5.6E-26 T 28-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 AM393_RS14940 ed6dcaf6f97521cf6d3b81f70bee4687 187 SMART SM00644 16 166 1.1E-57 T 28-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 AM393_RS14940 ed6dcaf6f97521cf6d3b81f70bee4687 187 SUPERFAMILY SSF55846 3 180 3.93E-67 T 28-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 AM393_RS14940 ed6dcaf6f97521cf6d3b81f70bee4687 187 Gene3D G3DSA:3.40.80.10 1 187 4.5E-51 T 28-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 AM393_RS28515 0ea8483fbc56bcf7252ec4f245bc2769 182 Pfam PF13098 Thioredoxin-like domain 56 179 5.8E-15 T 28-03-2018 IPR012336 Thioredoxin-like fold AM393_RS28515 0ea8483fbc56bcf7252ec4f245bc2769 182 Gene3D G3DSA:3.40.30.10 44 182 3.8E-10 T 28-03-2018 AM393_RS28515 0ea8483fbc56bcf7252ec4f245bc2769 182 SUPERFAMILY SSF52833 49 181 3.31E-17 T 28-03-2018 IPR012336 Thioredoxin-like fold AM393_RS27620 0ea8483fbc56bcf7252ec4f245bc2769 182 Pfam PF13098 Thioredoxin-like domain 56 179 5.8E-15 T 28-03-2018 IPR012336 Thioredoxin-like fold AM393_RS27620 0ea8483fbc56bcf7252ec4f245bc2769 182 Gene3D G3DSA:3.40.30.10 44 182 3.8E-10 T 28-03-2018 AM393_RS27620 0ea8483fbc56bcf7252ec4f245bc2769 182 SUPERFAMILY SSF52833 49 181 3.31E-17 T 28-03-2018 IPR012336 Thioredoxin-like fold AM393_RS01190 3271fc998e10006ce64cf97c0a8686e8 318 SUPERFAMILY SSF53807 38 314 1.61E-47 T 28-03-2018 AM393_RS01190 3271fc998e10006ce64cf97c0a8686e8 318 Gene3D G3DSA:3.40.50.1980 154 318 2.1E-36 T 28-03-2018 AM393_RS01190 3271fc998e10006ce64cf97c0a8686e8 318 Gene3D G3DSA:3.40.50.1980 15 153 5.8E-27 T 28-03-2018 AM393_RS01190 3271fc998e10006ce64cf97c0a8686e8 318 Pfam PF01497 Periplasmic binding protein 50 287 6.7E-22 T 28-03-2018 IPR002491 ABC transporter periplasmic binding domain GO:0005488 AM393_RS02715 266f5405f7eba1bde5ce91e177af1816 405 Pfam PF00155 Aminotransferase class I and II 35 394 9.2E-47 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AM393_RS02715 266f5405f7eba1bde5ce91e177af1816 405 Gene3D G3DSA:3.90.1150.10 281 405 3.7E-23 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM393_RS02715 266f5405f7eba1bde5ce91e177af1816 405 SUPERFAMILY SSF53383 7 401 7.05E-96 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM393_RS02715 266f5405f7eba1bde5ce91e177af1816 405 Gene3D G3DSA:3.40.640.10 53 280 4.7E-51 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM393_RS12730 230a045ab6b2d92fe22ac277936d4a9c 320 Hamap MF_00662 Phosphatidylserine decarboxylase proenzyme [psd]. 10 287 51.067 T 28-03-2018 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 AM393_RS12730 230a045ab6b2d92fe22ac277936d4a9c 320 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 49 285 1.3E-99 T 28-03-2018 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 AM393_RS12730 230a045ab6b2d92fe22ac277936d4a9c 320 Pfam PF02666 Phosphatidylserine decarboxylase 63 283 6.4E-59 T 28-03-2018 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 AM393_RS26820 3d1e74e72ef3aad69c24b44bcebdf111 130 PIRSF PIRSF005610 1 125 4.2E-25 T 28-03-2018 IPR007360 Invasion gene expression up-regulator, SirB AM393_RS26820 3d1e74e72ef3aad69c24b44bcebdf111 130 Pfam PF04247 Invasion gene expression up-regulator, SirB 5 126 2.4E-40 T 28-03-2018 IPR007360 Invasion gene expression up-regulator, SirB AM393_RS06200 6579b8369131c19a726a334b28cdddce 188 Pfam PF02325 YGGT family 101 167 4.3E-16 T 28-03-2018 IPR003425 CCB3/YggT GO:0016020 AM393_RS06200 6579b8369131c19a726a334b28cdddce 188 Pfam PF02325 YGGT family 10 78 3.0E-21 T 28-03-2018 IPR003425 CCB3/YggT GO:0016020 AM393_RS17210 370c435019b7265463b10159fc873d74 167 Pfam PF11319 Type VI secretion system VasI, EvfG, VC_A0118 43 165 1.1E-8 T 28-03-2018 IPR017738 Type VI secretion system-associated, VCA0118 AM393_RS27015 a1867e021c1936a5dec60af6e51d9bc9 194 TIGRFAM TIGR02747 TraV: type IV conjugative transfer system protein TraV 5 188 8.7E-33 T 28-03-2018 IPR014118 Type IV conjugative transfer system protein TraV AM393_RS27015 a1867e021c1936a5dec60af6e51d9bc9 194 Pfam PF09676 Type IV conjugative transfer system lipoprotein (TraV) 24 188 2.7E-41 T 28-03-2018 IPR014118 Type IV conjugative transfer system protein TraV AM393_RS01820 775cc38081b42165eadf8f8e12594d35 209 SMART SM00014 16 143 1.3E-21 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AM393_RS01820 775cc38081b42165eadf8f8e12594d35 209 SUPERFAMILY SSF48317 4 150 3.27E-17 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AM393_RS01820 775cc38081b42165eadf8f8e12594d35 209 Pfam PF01569 PAP2 superfamily 68 145 1.8E-10 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AM393_RS01820 775cc38081b42165eadf8f8e12594d35 209 Gene3D G3DSA:1.20.144.10 65 149 5.0E-7 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AM393_RS12495 ad6c4864b405e727c81d5eef8212ed8c 101 Gene3D G3DSA:1.10.1660.10 1 101 7.6E-12 T 28-03-2018 AM393_RS12495 ad6c4864b405e727c81d5eef8212ed8c 101 Pfam PF13591 MerR HTH family regulatory protein 8 92 5.6E-27 T 28-03-2018 AM393_RS12545 8316e00862cb5c7681d5dc5ef57c3e46 96 Pfam PF06069 PerC transcriptional activator 1 86 1.9E-27 T 28-03-2018 IPR024684 Transcriptional activator PerC/bacteriophage SfV Orf40 AM393_RS12545 8316e00862cb5c7681d5dc5ef57c3e46 96 ProDom PD063034 PERC TRANSCRIPTIONAL PLASMID REGULATOR BFPW ACTIVATOR TRANSCRIPTION DNA-BINDING REGULATION LDAB 3 86 2.0E-13 T 28-03-2018 IPR009277 PerC transcriptional activator AM393_RS04465 3d8485e534d86ad51f0fd0f1b2ea4c76 119 Pfam PF06923 Glucitol operon activator protein (GutM) 5 110 6.2E-36 T 28-03-2018 IPR009693 Glucitol operon activator AM393_RS04465 3d8485e534d86ad51f0fd0f1b2ea4c76 119 PIRSF PIRSF011474 1 118 3.6E-44 T 28-03-2018 IPR009693 Glucitol operon activator AM393_RS24805 261e11ee87658038f20b70c7a52a2495 314 SUPERFAMILY SSF161098 92 291 1.29E-15 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS24805 261e11ee87658038f20b70c7a52a2495 314 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 126 306 5.3E-27 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS24805 261e11ee87658038f20b70c7a52a2495 314 Gene3D G3DSA:1.10.3720.10 1 296 5.2E-31 T 28-03-2018 AM393_RS27665 88c73ba126a5be3558e111d7b1329bae 287 Gene3D G3DSA:3.40.50.10140 67 240 3.5E-10 T 28-03-2018 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 AM393_RS07985 cd88cde411d5c25688a205c41b149a87 99 Pfam PF05135 Phage gp6-like head-tail connector protein 7 94 1.9E-14 T 28-03-2018 IPR021146 Phage gp6-like head-tail connector protein AM393_RS07985 cd88cde411d5c25688a205c41b149a87 99 TIGRFAM TIGR01560 put_DNA_pack: uncharacterized phage protein (possible DNA packaging) 7 97 6.9E-22 T 28-03-2018 IPR006450 Phage protein of unkonwn function AM393_RS07985 cd88cde411d5c25688a205c41b149a87 99 Gene3D G3DSA:1.10.3230.10 3 83 4.0E-4 T 28-03-2018 AM393_RS08905 a6d61fd433f634359cf2e7e6b09b33f5 351 PIRSF PIRSF003097 49 347 1.7E-103 T 28-03-2018 IPR004513 Cell division protein FtsX GO:0007049|GO:0016021 AM393_RS08905 a6d61fd433f634359cf2e7e6b09b33f5 351 TIGRFAM TIGR00439 ftsX: putative protein insertion permease FtsX 46 350 9.4E-151 T 28-03-2018 IPR004513 Cell division protein FtsX GO:0007049|GO:0016021 AM393_RS16150 08fcf836df549b7568ecb93befd70af4 303 Hamap MF_00194 Recombination-associated protein RdgC [rdgC]. 2 302 43.571 T 28-03-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 AM393_RS16150 08fcf836df549b7568ecb93befd70af4 303 Pfam PF04381 Putative exonuclease, RdgC 2 300 2.7E-127 T 28-03-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 AM393_RS09455 f8f87d180d414f48d4d33a9a7df75a3e 393 Gene3D G3DSA:1.10.3470.10 50 389 5.1E-27 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AM393_RS09455 f8f87d180d414f48d4d33a9a7df75a3e 393 Pfam PF02653 Branched-chain amino acid transport system / permease component 56 383 1.3E-47 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AM393_RS17395 6c3cf83b2239528e4bf3b4e0acb63f84 343 Gene3D G3DSA:3.40.50.720 13 150 7.0E-38 T 28-03-2018 AM393_RS17395 6c3cf83b2239528e4bf3b4e0acb63f84 343 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 20 134 1.9E-27 T 28-03-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 AM393_RS17395 6c3cf83b2239528e4bf3b4e0acb63f84 343 Gene3D G3DSA:3.30.360.10 151 343 6.8E-29 T 28-03-2018 AM393_RS17395 6c3cf83b2239528e4bf3b4e0acb63f84 343 SUPERFAMILY SSF55347 145 306 1.39E-28 T 28-03-2018 AM393_RS17395 6c3cf83b2239528e4bf3b4e0acb63f84 343 SUPERFAMILY SSF51735 19 165 1.68E-47 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS25300 667e3662b86d5a0e857d03bbda66ec38 447 SMART SM01150 11 401 6.1E-230 T 28-03-2018 IPR009770 Domain of unknown function DUF1338 AM393_RS25300 667e3662b86d5a0e857d03bbda66ec38 447 Pfam PF07063 Domain of unknown function (DUF1338) 9 401 9.3E-120 T 28-03-2018 IPR009770 Domain of unknown function DUF1338 AM393_RS02255 583c2dfcf2e6373d9a90ec78dd39a614 84 Pfam PF03692 Putative zinc- or iron-chelating domain 2 59 2.1E-5 T 28-03-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein AM393_RS13500 d08ae70be8116e5a132f5590808e64f2 106 ProDom PD070475 P4 PHAGE PROPHAGE-DERIVED CNR-LIKE ORF106 T2655 20 106 4.0E-43 T 28-03-2018 IPR035317 Protein of unknown function DUF5375 AM393_RS13500 d08ae70be8116e5a132f5590808e64f2 106 Pfam PF17345 Family of unknown function (DUF5375) 1 106 2.2E-61 T 28-03-2018 IPR035317 Protein of unknown function DUF5375 AM393_RS02940 34adf519d8473a9000237094865d4499 442 Gene3D G3DSA:2.40.160.60 28 442 1.7E-88 T 28-03-2018 AM393_RS02940 34adf519d8473a9000237094865d4499 442 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 19 442 1.8E-147 T 28-03-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) AM393_RS02940 34adf519d8473a9000237094865d4499 442 SUPERFAMILY SSF56935 28 442 3.39E-108 T 28-03-2018 AM393_RS08975 75e3fc9662fa08b3820765ccef37b7da 112 SUPERFAMILY SSF103481 6 109 3.92E-16 T 28-03-2018 AM393_RS08975 75e3fc9662fa08b3820765ccef37b7da 112 Hamap MF_01869 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE [arnE]. 2 112 31.004 T 28-03-2018 IPR022883 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase, subunit ArnE AM393_RS08975 75e3fc9662fa08b3820765ccef37b7da 112 Pfam PF00892 EamA-like transporter family 2 108 4.0E-14 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM393_RS10425 2bbc4f2ef07738d50edeec0d1287b37f 445 PIRSF PIRSF005353 5 444 1.7E-175 T 28-03-2018 IPR026033 Purine permease PbuG-like AM393_RS10425 2bbc4f2ef07738d50edeec0d1287b37f 445 Pfam PF00860 Permease family 31 404 4.8E-42 T 28-03-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 AM393_RS09180 2a77ffe0530387ecab7160c189231503 781 PRINTS PR01440 Cellulose synthase subunit B signature 234 257 9.5E-25 T 28-03-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 AM393_RS09180 2a77ffe0530387ecab7160c189231503 781 PRINTS PR01440 Cellulose synthase subunit B signature 102 123 9.5E-25 T 28-03-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 AM393_RS09180 2a77ffe0530387ecab7160c189231503 781 PRINTS PR01440 Cellulose synthase subunit B signature 531 550 9.5E-25 T 28-03-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 AM393_RS09180 2a77ffe0530387ecab7160c189231503 781 PRINTS PR01440 Cellulose synthase subunit B signature 192 213 9.5E-25 T 28-03-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 AM393_RS09180 2a77ffe0530387ecab7160c189231503 781 PRINTS PR01440 Cellulose synthase subunit B signature 315 336 9.5E-25 T 28-03-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 AM393_RS09180 2a77ffe0530387ecab7160c189231503 781 PRINTS PR01440 Cellulose synthase subunit B signature 398 419 9.5E-25 T 28-03-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 AM393_RS09180 2a77ffe0530387ecab7160c189231503 781 Pfam PF03170 Bacterial cellulose synthase subunit 73 682 5.3E-223 T 28-03-2018 IPR018513 Cellulose synthase BcsB, bacterial GO:0006011|GO:0016020 AM393_RS28285 9dea38e224a30f012e4f7614925e1370 103 Gene3D G3DSA:1.10.1220.10 16 48 2.9E-5 T 28-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 AM393_RS07875 896c87c6dcc0e230e93e3631779b7725 330 PIRSF PIRSF038471 2 284 3.3E-75 T 28-03-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 AM393_RS07875 896c87c6dcc0e230e93e3631779b7725 330 Pfam PF04085 rod shape-determining protein MreC 123 269 7.1E-37 T 28-03-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 AM393_RS07875 896c87c6dcc0e230e93e3631779b7725 330 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 1 284 1.9E-125 T 28-03-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 AM393_RS00165 defbb4d4495ade9d460d66df22fc8c90 428 Pfam PF11862 Domain of unknown function (DUF3382) 15 112 8.8E-20 T 28-03-2018 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal AM393_RS00165 defbb4d4495ade9d460d66df22fc8c90 428 Pfam PF02653 Branched-chain amino acid transport system / permease component 120 405 1.1E-47 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AM393_RS00165 defbb4d4495ade9d460d66df22fc8c90 428 Gene3D G3DSA:1.10.3470.10 106 410 1.2E-43 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AM393_RS26965 3a7aadeef5084d996e1899ba2676d2f8 211 TIGRFAM TIGR02743 TraW: type-F conjugative transfer system protein TraW 9 204 2.0E-69 T 28-03-2018 IPR014114 Type-F conjugative transfer system protein TraW AM393_RS26965 3a7aadeef5084d996e1899ba2676d2f8 211 Pfam PF12477 Sex factor F TraW protein N terminal 7 32 2.0E-6 T 28-03-2018 IPR025864 Type-F conjugative transfer system protein TraW N-terminal domain AM393_RS01185 6154f7f13d93e4349b63a777f07f14e6 337 Pfam PF01032 FecCD transport family 16 329 9.2E-82 T 28-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 AM393_RS01185 6154f7f13d93e4349b63a777f07f14e6 337 SUPERFAMILY SSF81345 3 329 1.57E-75 T 28-03-2018 IPR029022 ABC transporter, BtuC-like AM393_RS01185 6154f7f13d93e4349b63a777f07f14e6 337 Gene3D G3DSA:1.10.3470.10 1 337 1.3E-65 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AM393_RS21235 2db5acf64ddc183c0cee2a9164c2756c 427 Hamap MF_01232 UPF0229 protein YeaH [yeaH]. 1 423 42.036 T 28-03-2018 IPR006698 Uncharacterised protein family UPF0229 AM393_RS21235 2db5acf64ddc183c0cee2a9164c2756c 427 Pfam PF04285 Protein of unknown function (DUF444) 4 421 6.2E-187 T 28-03-2018 IPR006698 Uncharacterised protein family UPF0229 AM393_RS11520 2ade526880ac0fb8c59f7fe22442dd0e 251 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 25 250 6.4E-88 T 28-03-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 AM393_RS11520 2ade526880ac0fb8c59f7fe22442dd0e 251 SUPERFAMILY SSF53335 18 249 2.01E-51 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM393_RS11520 2ade526880ac0fb8c59f7fe22442dd0e 251 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 16 250 39.269 T 28-03-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 AM393_RS11520 2ade526880ac0fb8c59f7fe22442dd0e 251 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 36 51 - T 28-03-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 AM393_RS11520 2ade526880ac0fb8c59f7fe22442dd0e 251 Gene3D G3DSA:3.40.50.150 2 250 4.6E-46 T 28-03-2018 AM393_RS11520 2ade526880ac0fb8c59f7fe22442dd0e 251 Pfam PF01209 ubiE/COQ5 methyltransferase family 15 250 1.0E-110 T 28-03-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 AM393_RS11520 2ade526880ac0fb8c59f7fe22442dd0e 251 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 158 172 - T 28-03-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 AM393_RS08655 7723e8a91afffdd1a0d870b637a42ed2 89 Pfam PF07338 Protein of unknown function (DUF1471) 36 89 2.5E-18 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 AM393_RS08655 7723e8a91afffdd1a0d870b637a42ed2 89 Gene3D G3DSA:3.30.1660.10 22 89 2.5E-21 T 28-03-2018 IPR025543 Dodecin-like AM393_RS08655 7723e8a91afffdd1a0d870b637a42ed2 89 SUPERFAMILY SSF159871 4 89 5.75E-25 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 AM393_RS20500 87f80795d2b27abc8925de35cf951322 276 TIGRFAM TIGR00145 TIGR00145: FTR1 family protein 1 269 3.2E-98 T 28-03-2018 IPR005217 Iron permease FTR1-like GO:0005381|GO:0005886|GO:0006827|GO:0033573 AM393_RS20500 87f80795d2b27abc8925de35cf951322 276 SUPERFAMILY SSF103473 5 221 8.89E-7 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS20500 87f80795d2b27abc8925de35cf951322 276 Pfam PF03239 Iron permease FTR1 family 1 264 7.7E-73 T 28-03-2018 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0006827|GO:0016020|GO:0033573 AM393_RS19545 f94ec7eedc21b99fde714262bfef724a 71 Pfam PF16080 Bacteriophage holin family HP1 5 55 7.0E-12 T 28-03-2018 IPR032118 Bacteriophage holin HP1 family AM393_RS28075 6103c61e27af24e39e4f61ee06391661 1005 Pfam PF01526 Tn3 transposase DDE domain 588 978 2.7E-130 T 28-03-2018 IPR002513 Tn3 transposase DDE domain GO:0004803|GO:0006313 AM393_RS28075 6103c61e27af24e39e4f61ee06391661 1005 Pfam PF13700 Domain of unknown function (DUF4158) 9 173 3.6E-32 T 28-03-2018 IPR025296 Domain of unknown function DUF4158 AM393_RS00825 638471c982c38584bc7b3848b72cc8a3 212 Gene3D G3DSA:3.40.1400.10 1 212 3.8E-56 T 28-03-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 AM393_RS00825 638471c982c38584bc7b3848b72cc8a3 212 Pfam PF02502 Ribose/Galactose Isomerase 3 144 1.8E-29 T 28-03-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 AM393_RS00825 638471c982c38584bc7b3848b72cc8a3 212 Pfam PF12408 Ribose-5-phosphate isomerase 164 210 1.6E-22 T 28-03-2018 IPR022133 Ribose-5-phosphate isomerase, C-terminal AM393_RS00825 638471c982c38584bc7b3848b72cc8a3 212 SUPERFAMILY SSF89623 1 161 3.4E-36 T 28-03-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 AM393_RS00525 9625195bee85e8ba0bacfb2116c0df1b 79 ProDom PD060427 YEBV CYTOPLASMIC Y1856 ESCHERICHIA ECS2546 YPO1694 COLI STY1982 SIMILAR 3 79 9.0E-36 T 28-03-2018 IPR009950 Protein of unknown function DUF1480 AM393_RS00525 9625195bee85e8ba0bacfb2116c0df1b 79 Pfam PF07351 Protein of unknown function (DUF1480) 1 78 9.1E-43 T 28-03-2018 IPR009950 Protein of unknown function DUF1480 AM393_RS19135 005e2f850472c5f5a2f9658caed14e02 307 Gene3D G3DSA:1.10.10.10 11 95 6.3E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS19135 005e2f850472c5f5a2f9658caed14e02 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 51 4.2E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS19135 005e2f850472c5f5a2f9658caed14e02 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 41 4.2E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS19135 005e2f850472c5f5a2f9658caed14e02 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 51 62 4.2E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS19135 005e2f850472c5f5a2f9658caed14e02 307 Gene3D G3DSA:3.40.190.10 99 183 2.7E-9 T 28-03-2018 AM393_RS19135 005e2f850472c5f5a2f9658caed14e02 307 SUPERFAMILY SSF53850 102 303 5.07E-30 T 28-03-2018 AM393_RS19135 005e2f850472c5f5a2f9658caed14e02 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 15 74 2.1E-18 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS19135 005e2f850472c5f5a2f9658caed14e02 307 SUPERFAMILY SSF46785 8 121 5.99E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS19135 005e2f850472c5f5a2f9658caed14e02 307 Gene3D G3DSA:3.40.190.10 184 270 2.3E-13 T 28-03-2018 AM393_RS19135 005e2f850472c5f5a2f9658caed14e02 307 Pfam PF03466 LysR substrate binding domain 103 299 1.3E-25 T 28-03-2018 IPR005119 LysR, substrate-binding AM393_RS13860 ba255bb90d8850e42b131a3899790df4 67 Pfam PF04328 Selenoprotein, putative 5 67 1.4E-27 T 28-03-2018 IPR007423 Selenoprotein, putative AM393_RS08020 f6659e5c159882ab21f72c18e8da5e6c 711 Pfam PF06048 Domain of unknown function (DUF927) 159 439 7.5E-58 T 28-03-2018 IPR009270 Domain of unknown function DUF927 AM393_RS11200 501e3157dc377af533969398cc2bde9c 85 Pfam PF13710 ACT domain 13 73 3.3E-27 T 28-03-2018 AM393_RS11200 501e3157dc377af533969398cc2bde9c 85 Gene3D G3DSA:3.30.70.260 2 85 3.0E-7 T 28-03-2018 AM393_RS11200 501e3157dc377af533969398cc2bde9c 85 SUPERFAMILY SSF55021 3 75 4.16E-12 T 28-03-2018 AM393_RS16580 af5f136a336817e22d93e75b3aa9bd5d 85 Gene3D G3DSA:1.10.1220.10 2 82 3.1E-5 T 28-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 AM393_RS16935 cb8b13566a7fbe8fedc9b7a09e34478a 111 Pfam PF12728 Helix-turn-helix domain 8 46 7.5E-7 T 28-03-2018 AM393_RS16935 cb8b13566a7fbe8fedc9b7a09e34478a 111 Gene3D G3DSA:1.10.10.10 7 58 1.6E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS16935 cb8b13566a7fbe8fedc9b7a09e34478a 111 ProDom PD031037 EXCISIONASE DNA-BINDING DNA XIS RECOMBINATION SHIGELLA P40 X PROBABLE GP35 7 109 3.0E-7 T 28-03-2018 AM393_RS16935 cb8b13566a7fbe8fedc9b7a09e34478a 111 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 7 53 1.9E-9 T 28-03-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 AM393_RS07190 b2b02814aed180ef68daa10133940e03 495 SMART SM00858 10 81 4.4E-17 T 28-03-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 AM393_RS07190 b2b02814aed180ef68daa10133940e03 495 Pfam PF08666 SAF domain 10 81 1.6E-16 T 28-03-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 AM393_RS07190 b2b02814aed180ef68daa10133940e03 495 Pfam PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus 107 494 2.3E-155 T 28-03-2018 IPR007392 D-galactarate/Altronate dehydratase, C-terminal GO:0016829 AM393_RS19760 f60983cbff38bc9ec910202e54e0af90 171 Pfam PF12883 Protein of unknown function (DUF3828) 40 154 7.1E-22 T 28-03-2018 IPR024289 Domain of unknown function DUF3828 AM393_RS19125 5712c3479ca4d1bd0ed9b425f2a0b6a9 331 SUPERFAMILY SSF111369 41 98 1.31E-8 T 28-03-2018 AM393_RS19125 5712c3479ca4d1bd0ed9b425f2a0b6a9 331 Gene3D G3DSA:1.10.287.470 110 169 6.2E-11 T 28-03-2018 AM393_RS19125 5712c3479ca4d1bd0ed9b425f2a0b6a9 331 Gene3D G3DSA:1.10.287.470 170 192 0.048 T 28-03-2018 AM393_RS19125 5712c3479ca4d1bd0ed9b425f2a0b6a9 331 SUPERFAMILY SSF111369 177 322 2.88E-13 T 28-03-2018 AM393_RS19125 5712c3479ca4d1bd0ed9b425f2a0b6a9 331 Gene3D G3DSA:2.40.50.100 42 106 1.6E-14 T 28-03-2018 AM393_RS19125 5712c3479ca4d1bd0ed9b425f2a0b6a9 331 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 37 318 2.8E-18 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AM393_RS19125 5712c3479ca4d1bd0ed9b425f2a0b6a9 331 Gene3D G3DSA:1.20.1600.10 193 314 5.3E-17 T 28-03-2018 AM393_RS16385 cd7cba997a3eb7bf5b862fcd9f0fc7ff 272 Gene3D G3DSA:3.20.20.150 1 270 3.0E-32 T 28-03-2018 AM393_RS16385 cd7cba997a3eb7bf5b862fcd9f0fc7ff 272 Pfam PF01261 Xylose isomerase-like TIM barrel 22 207 6.9E-16 T 28-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AM393_RS16385 cd7cba997a3eb7bf5b862fcd9f0fc7ff 272 SUPERFAMILY SSF51658 4 269 2.63E-57 T 28-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AM393_RS17560 e66dcff25a0dd19792d380a12a0fe4d9 197 Pfam PF11354 Protein of unknown function (DUF3156) 17 174 3.5E-61 T 28-03-2018 IPR021500 Protein of unknown function DUF3156 AM393_RS17585 8adbb94a6c7ae6c2863c0a32f3abdc77 360 SUPERFAMILY SSF51004 49 345 4.97E-36 T 28-03-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain AM393_RS17585 8adbb94a6c7ae6c2863c0a32f3abdc77 360 Gene3D G3DSA:2.130.10.10 39 357 5.0E-43 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 AM393_RS04030 f3e56329e00a6e0fe2f3e2224f2d89ac 113 Pfam PF04355 SmpA / OmlA family 35 104 9.2E-27 T 28-03-2018 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 AM393_RS04030 f3e56329e00a6e0fe2f3e2224f2d89ac 113 Gene3D G3DSA:3.30.1450.10 37 107 2.7E-10 T 28-03-2018 AM393_RS04030 f3e56329e00a6e0fe2f3e2224f2d89ac 113 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 4 112 33.186 T 28-03-2018 IPR026592 Outer membrane protein assembly factor BamE AM393_RS01355 00b7e0f2e53a2311ea3c308276d5903c 418 Pfam PF03743 Bacterial conjugation TrbI-like protein 222 406 7.5E-42 T 28-03-2018 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI AM393_RS10435 ffdb405689ec31aca223fe8c309cf828 221 Gene3D G3DSA:3.40.50.1000 77 217 1.3E-20 T 28-03-2018 IPR023214 HAD-like domain AM393_RS10435 ffdb405689ec31aca223fe8c309cf828 221 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 183 4.7E-23 T 28-03-2018 IPR023214 HAD-like domain AM393_RS10435 ffdb405689ec31aca223fe8c309cf828 221 Gene3D G3DSA:1.10.150.240 19 76 3.0E-17 T 28-03-2018 IPR023198 Phosphoglycolate phosphatase, domain 2 AM393_RS10435 ffdb405689ec31aca223fe8c309cf828 221 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 61 183 2.4E-14 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM393_RS10435 ffdb405689ec31aca223fe8c309cf828 221 SUPERFAMILY SSF56784 4 212 3.92E-48 T 28-03-2018 IPR023214 HAD-like domain AM393_RS10435 ffdb405689ec31aca223fe8c309cf828 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 4 15 2.6E-5 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM393_RS10435 ffdb405689ec31aca223fe8c309cf828 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 97 110 2.6E-5 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM393_RS10435 ffdb405689ec31aca223fe8c309cf828 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 129 145 2.6E-5 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM393_RS23640 715596bcf2ea76662562dead9b26f0df 126 SUPERFAMILY SSF55331 2 122 4.02E-30 T 28-03-2018 IPR014347 Tautomerase/MIF superfamily AM393_RS23640 715596bcf2ea76662562dead9b26f0df 126 Pfam PF14552 Tautomerase enzyme 38 119 1.5E-26 T 28-03-2018 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 AM393_RS23640 715596bcf2ea76662562dead9b26f0df 126 Gene3D G3DSA:3.30.429.10 1 125 1.3E-21 T 28-03-2018 AM393_RS13095 881aa7b88ec7af72287d3983e8fdcd75 450 SUPERFAMILY SSF111283 17 449 7.85E-132 T 28-03-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 AM393_RS13095 881aa7b88ec7af72287d3983e8fdcd75 450 Gene3D G3DSA:3.30.2290.10 10 236 3.3E-62 T 28-03-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal domain AM393_RS13095 881aa7b88ec7af72287d3983e8fdcd75 450 Pfam PF01523 Putative modulator of DNA gyrase 36 326 7.3E-62 T 28-03-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 AM393_RS21020 22eb6800a60f8c2076a50163555d4d97 164 SUPERFAMILY SSF47240 1 154 5.21E-51 T 28-03-2018 IPR009078 Ferritin-like superfamily AM393_RS21020 22eb6800a60f8c2076a50163555d4d97 164 Gene3D G3DSA:1.20.1260.10 1 164 3.0E-28 T 28-03-2018 IPR012347 Ferritin-related AM393_RS21020 22eb6800a60f8c2076a50163555d4d97 164 Pfam PF05974 Domain of unknown function (DUF892) 6 162 1.7E-54 T 28-03-2018 IPR010287 Domain of unknown function DUF892 AM393_RS04945 842a105effc5d64ce2f18f161ae49e55 147 PRINTS PR00369 Flavodoxin signature 82 92 6.7E-8 T 28-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AM393_RS04945 842a105effc5d64ce2f18f161ae49e55 147 PRINTS PR00369 Flavodoxin signature 106 125 6.7E-8 T 28-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AM393_RS04945 842a105effc5d64ce2f18f161ae49e55 147 PRINTS PR00369 Flavodoxin signature 53 64 6.7E-8 T 28-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AM393_RS04945 842a105effc5d64ce2f18f161ae49e55 147 Pfam PF00258 Flavodoxin 6 131 3.5E-23 T 28-03-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 AM393_RS04945 842a105effc5d64ce2f18f161ae49e55 147 SUPERFAMILY SSF52218 1 146 1.24E-40 T 28-03-2018 IPR029039 Flavoprotein-like domain AM393_RS04945 842a105effc5d64ce2f18f161ae49e55 147 Gene3D G3DSA:3.40.50.360 1 147 5.5E-29 T 28-03-2018 IPR029039 Flavoprotein-like domain AM393_RS23710 63f7dea357c78387cc94f7b3655ada83 87 Pfam PF09905 DNA-binding protein VF530 5 66 1.1E-33 T 28-03-2018 IPR018668 DNA-binding protein VF530-like GO:0003677 AM393_RS23710 63f7dea357c78387cc94f7b3655ada83 87 Gene3D G3DSA:1.10.720.30 12 68 1.2E-30 T 28-03-2018 IPR003034 SAP domain AM393_RS17045 303f988916873ab3ef491258c930dd34 56 Pfam PF05322 NINE Protein 18 53 9.6E-6 T 28-03-2018 IPR007986 NINE AM393_RS00990 47e8360e236db83d5a3b8c9ea8bcb03b 265 Hamap MF_01593 Protein MtfA [mtfA]. 1 265 62.92 T 28-03-2018 IPR010384 MtfA family AM393_RS00990 47e8360e236db83d5a3b8c9ea8bcb03b 265 Gene3D G3DSA:3.40.390.10 76 245 3.2E-22 T 28-03-2018 IPR024079 Metallopeptidase, catalytic domain GO:0008237 AM393_RS00990 47e8360e236db83d5a3b8c9ea8bcb03b 265 Pfam PF06167 Glucose-regulated metallo-peptidase M90 19 243 1.1E-63 T 28-03-2018 IPR010384 MtfA family AM393_RS00990 47e8360e236db83d5a3b8c9ea8bcb03b 265 SUPERFAMILY SSF55486 35 245 4.32E-41 T 28-03-2018 AM393_RS19085 de079ffa09e5014aa47001022d1f55b7 234 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 19 230 3.9E-59 T 28-03-2018 IPR006214 Bax inhibitor 1-related AM393_RS28575 49578a94e7f4b60f591b0fc2b01e512e 133 Gene3D G3DSA:1.20.120.330 1 65 8.5E-5 T 28-03-2018 AM393_RS28575 49578a94e7f4b60f591b0fc2b01e512e 133 SUPERFAMILY SSF81593 8 110 3.37E-5 T 28-03-2018 AM393_RS28575 49578a94e7f4b60f591b0fc2b01e512e 133 Gene3D G3DSA:1.20.120.580 66 126 3.4E-15 T 28-03-2018 IPR008201 Protein of unknown function DUF86 AM393_RS28575 49578a94e7f4b60f591b0fc2b01e512e 133 Pfam PF01934 Protein of unknown function DUF86 13 109 5.2E-23 T 28-03-2018 IPR008201 Protein of unknown function DUF86 AM393_RS20045 da24b3641eb02b45673efade1aed8c57 234 Hamap MF_01802 Chromosome partition protein MukE [mukE]. 10 234 48.686 T 28-03-2018 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 AM393_RS20045 da24b3641eb02b45673efade1aed8c57 234 Pfam PF04288 MukE-like family 10 230 9.5E-126 T 28-03-2018 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 AM393_RS14685 de01cec027f6df2b5437d619814d89e6 255 Pfam PF09335 SNARE associated Golgi protein 36 159 7.0E-20 T 28-03-2018 IPR032816 SNARE associated Golgi protein AM393_RS17470 cd4de9deda6f77955cf00d18760cf9f9 380 Gene3D G3DSA:2.40.50.100 62 139 1.1E-14 T 28-03-2018 AM393_RS17470 cd4de9deda6f77955cf00d18760cf9f9 380 Gene3D G3DSA:1.20.1600.10 197 273 2.9E-4 T 28-03-2018 AM393_RS17470 cd4de9deda6f77955cf00d18760cf9f9 380 SUPERFAMILY SSF111369 60 115 2.48E-9 T 28-03-2018 AM393_RS17470 cd4de9deda6f77955cf00d18760cf9f9 380 Gene3D G3DSA:1.10.287.470 140 191 2.1E-7 T 28-03-2018 AM393_RS17470 cd4de9deda6f77955cf00d18760cf9f9 380 Pfam PF13533 Biotin-lipoyl like 63 111 1.3E-11 T 28-03-2018 AM393_RS11885 e2e1c557a78bcb45324c013a49a88960 594 Hamap MF_00747 Isocitrate dehydrogenase kinase/phosphatase [aceK]. 1 570 42.967 T 28-03-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 AM393_RS11885 e2e1c557a78bcb45324c013a49a88960 594 PIRSF PIRSF000719 1 575 3.4E-287 T 28-03-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 AM393_RS11885 e2e1c557a78bcb45324c013a49a88960 594 Pfam PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) 9 566 3.3E-243 T 28-03-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 AM393_RS11885 e2e1c557a78bcb45324c013a49a88960 594 ProDom PD043552 KINASE KINASE/PHOSPHATASE ISOCITRATE DEHYDROGENASE 3.1.3.- IDH TRANSFERASE IDHK/P HYDROLASE ENZYME 9 573 0.0 T 28-03-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 AM393_RS16645 ddf1418c4497ea29516ef78b3e9ae750 104 SUPERFAMILY SSF55604 27 98 4.32E-18 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AM393_RS16645 ddf1418c4497ea29516ef78b3e9ae750 104 Gene3D G3DSA:3.30.1360.60 25 100 5.1E-23 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AM393_RS16645 ddf1418c4497ea29516ef78b3e9ae750 104 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 23 86 7.4E-16 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AM393_RS16645 ddf1418c4497ea29516ef78b3e9ae750 104 Pfam PF00367 phosphotransferase system, EIIB 30 62 4.6E-11 T 28-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AM393_RS27630 90a87c66b69760e733942d74e84c4a9a 88 Pfam PF08681 Protein of unknown function (DUF1778) 6 82 7.3E-25 T 28-03-2018 IPR014795 Vibrio phage ICP1, Orf50 AM393_RS27630 90a87c66b69760e733942d74e84c4a9a 88 Gene3D G3DSA:1.20.5.780 3 82 3.2E-24 T 28-03-2018 AM393_RS27630 90a87c66b69760e733942d74e84c4a9a 88 SUPERFAMILY SSF47598 4 79 6.45E-20 T 28-03-2018 IPR010985 Ribbon-helix-helix GO:0006355 AM393_RS25540 60e860e0acdeb9ce1b84bc7843217afc 161 SUPERFAMILY SSF46689 66 116 6.02E-13 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS25540 60e860e0acdeb9ce1b84bc7843217afc 161 Gene3D G3DSA:1.10.10.60 67 130 1.0E-11 T 28-03-2018 AM393_RS25540 60e860e0acdeb9ce1b84bc7843217afc 161 Pfam PF12833 Helix-turn-helix domain 36 114 5.1E-18 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM393_RS25540 60e860e0acdeb9ce1b84bc7843217afc 161 SUPERFAMILY SSF46689 14 63 1.24E-9 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM393_RS25540 60e860e0acdeb9ce1b84bc7843217afc 161 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 82 97 1.8E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM393_RS25540 60e860e0acdeb9ce1b84bc7843217afc 161 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 97 113 1.8E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM393_RS25540 60e860e0acdeb9ce1b84bc7843217afc 161 Gene3D G3DSA:1.10.10.60 9 66 4.3E-11 T 28-03-2018 AM393_RS25540 60e860e0acdeb9ce1b84bc7843217afc 161 SMART SM00342 30 113 1.6E-20 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM393_RS22585 6ad321b74b248f838cd3b9cd9a68639e 87 Pfam PF03891 Domain of unknown function (DUF333) 38 82 3.6E-15 T 28-03-2018 IPR005590 Protein of unknown function DUF333 AM393_RS16320 b8de3510eacb4aba7f8ceb7b72312abb 167 SUPERFAMILY SSF101307 11 158 1.96E-48 T 28-03-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 AM393_RS16320 b8de3510eacb4aba7f8ceb7b72312abb 167 PIRSF PIRSF006162 8 165 1.3E-59 T 28-03-2018 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 AM393_RS16320 b8de3510eacb4aba7f8ceb7b72312abb 167 Gene3D G3DSA:1.10.3760.10 46 163 1.3E-38 T 28-03-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 AM393_RS16320 b8de3510eacb4aba7f8ceb7b72312abb 167 Pfam PF04608 Phosphatidylglycerophosphatase A 18 158 6.2E-53 T 28-03-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 AM393_RS01090 39bb604c19b3dc55e08140926e26111e 283 Gene3D G3DSA:3.40.630.10 16 276 8.6E-22 T 28-03-2018 AM393_RS01090 39bb604c19b3dc55e08140926e26111e 283 SUPERFAMILY SSF53187 66 268 1.69E-18 T 28-03-2018 AM393_RS06820 28c789ffaa9d05869b2abcc4c0d7967c 256 Pfam PF02535 ZIP Zinc transporter 103 245 6.6E-24 T 28-03-2018 IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 AM393_RS27245 8185aa99f09f581337bc358b50aeeece 84 ProDom PD057609 DNA POLYMERASE THETA SUBUNIT TRANSFERASE III NUCLEOTIDYLTRANSFERASE III DNA-DIRECTED REPLICATION 5 74 1.0E-8 T 28-03-2018 IPR009052 DNA polymerase III-theta, bacterial GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM393_RS27245 8185aa99f09f581337bc358b50aeeece 84 SUPERFAMILY SSF46575 1 81 8.11E-35 T 28-03-2018 AM393_RS27245 8185aa99f09f581337bc358b50aeeece 84 Gene3D G3DSA:1.20.58.250 4 66 1.6E-27 T 28-03-2018 IPR009052 DNA polymerase III-theta, bacterial GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM393_RS27245 8185aa99f09f581337bc358b50aeeece 84 Pfam PF06440 DNA polymerase III, theta subunit 3 71 1.5E-32 T 28-03-2018 IPR009052 DNA polymerase III-theta, bacterial GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM393_RS02155 b9dec8bfa5669fc8ec7ecc4a5233cc5f 336 Gene3D G3DSA:1.10.3470.10 35 331 1.0E-30 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AM393_RS02155 b9dec8bfa5669fc8ec7ecc4a5233cc5f 336 Pfam PF02653 Branched-chain amino acid transport system / permease component 41 325 7.3E-49 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AM393_RS10445 7c2c90c840623e83d29de85a74e4fa88 388 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 42 102 4.3E-7 T 28-03-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077 AM393_RS10445 7c2c90c840623e83d29de85a74e4fa88 388 Gene3D G3DSA:2.60.40.10 36 130 2.8E-11 T 28-03-2018 IPR013783 Immunoglobulin-like fold AM393_RS10445 7c2c90c840623e83d29de85a74e4fa88 388 SUPERFAMILY SSF53474 135 388 1.28E-40 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AM393_RS10445 7c2c90c840623e83d29de85a74e4fa88 388 Gene3D G3DSA:3.40.50.1820 131 388 2.3E-32 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AM393_RS10445 7c2c90c840623e83d29de85a74e4fa88 388 SUPERFAMILY SSF81296 43 103 2.45E-7 T 28-03-2018 IPR014756 Immunoglobulin E-set AM393_RS10445 7c2c90c840623e83d29de85a74e4fa88 388 Pfam PF00756 Putative esterase 149 378 4.7E-20 T 28-03-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 AM393_RS13155 7a362fdf49e12a5d0c12b81f9588063a 80 TIGRFAM TIGR02384 RelB_DinJ: addiction module antitoxin, RelB/DinJ family 1 80 1.1E-19 T 28-03-2018 IPR007337 RelB antitoxin/Antitoxin DinJ AM393_RS13155 7a362fdf49e12a5d0c12b81f9588063a 80 Pfam PF04221 RelB antitoxin 1 69 3.1E-14 T 28-03-2018 IPR007337 RelB antitoxin/Antitoxin DinJ AM393_RS23245 928f7b3b07566f5885b571fab7dcb9c2 89 ProDom PD336997 PRECURSOR SIGNAL MEMBRANE OUTER YNFD ESCHERICHIA EXPORTED PP0087 COLI PP0090 1 78 2.0E-26 T 28-03-2018 IPR010595 Protein of unknown function DUF1161 AM393_RS23245 928f7b3b07566f5885b571fab7dcb9c2 89 Pfam PF06649 Protein of unknown function (DUF1161) 25 78 6.3E-21 T 28-03-2018 IPR010595 Protein of unknown function DUF1161 AM393_RS00560 aa5e6239b87e8632a464f403b6a93655 501 Gene3D G3DSA:3.40.50.300 13 467 4.7E-4 T 28-03-2018 AM393_RS20595 7411e4307e98f7df4b6960a6e0ddcff6 386 Pfam PF01757 Acyltransferase family 11 357 4.3E-31 T 28-03-2018 IPR002656 Acyltransferase 3 GO:0016747 AM393_RS20595 7411e4307e98f7df4b6960a6e0ddcff6 386 Hamap MF_01066 Glucans biosynthesis protein C [mdoC]. 2 375 37.82 T 28-03-2018 IPR023723 Glucan biosynthesis protein C GO:0016741 AM393_RS12660 c516ffbcefc6a19fec4106dff9753f9a 214 Gene3D G3DSA:1.10.10.10 11 113 6.7E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS12660 c516ffbcefc6a19fec4106dff9753f9a 214 SUPERFAMILY SSF46894 31 107 3.68E-14 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM393_RS12660 c516ffbcefc6a19fec4106dff9753f9a 214 SMART SM00862 32 109 6.8E-12 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM393_RS12660 c516ffbcefc6a19fec4106dff9753f9a 214 Pfam PF00486 Transcriptional regulatory protein, C terminal 33 107 2.2E-12 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM393_RS08190 694a1cd0790ca83ee4f640854ba826a4 122 Pfam PF09350 Domain of unknown function (DUF1992) 7 73 2.8E-24 T 28-03-2018 IPR018961 DnaJ homologue, subfamily C, member 28, conserved domain AM393_RS24790 78649638a6b5f552feffde81aa10127e 199 Gene3D G3DSA:3.90.80.10 19 199 3.2E-48 T 28-03-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 AM393_RS24790 78649638a6b5f552feffde81aa10127e 199 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 34 194 30.417 T 28-03-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 AM393_RS24790 78649638a6b5f552feffde81aa10127e 199 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 85 91 - T 28-03-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 AM393_RS24790 78649638a6b5f552feffde81aa10127e 199 Pfam PF00719 Inorganic pyrophosphatase 38 194 8.4E-46 T 28-03-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 AM393_RS24790 78649638a6b5f552feffde81aa10127e 199 SUPERFAMILY SSF50324 29 194 7.06E-54 T 28-03-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 AM393_RS02945 c988400328a09e1a5dec4d26127f0e30 253 PRINTS PR01805 VacJ lipoprotein signature 101 118 2.9E-35 T 28-03-2018 IPR007428 MlaA lipoprotein GO:0016020 AM393_RS02945 c988400328a09e1a5dec4d26127f0e30 253 PRINTS PR01805 VacJ lipoprotein signature 32 45 2.9E-35 T 28-03-2018 IPR007428 MlaA lipoprotein GO:0016020 AM393_RS02945 c988400328a09e1a5dec4d26127f0e30 253 PRINTS PR01805 VacJ lipoprotein signature 140 157 2.9E-35 T 28-03-2018 IPR007428 MlaA lipoprotein GO:0016020 AM393_RS02945 c988400328a09e1a5dec4d26127f0e30 253 PRINTS PR01805 VacJ lipoprotein signature 50 66 2.9E-35 T 28-03-2018 IPR007428 MlaA lipoprotein GO:0016020 AM393_RS02945 c988400328a09e1a5dec4d26127f0e30 253 Pfam PF04333 MlaA lipoprotein 31 224 1.4E-67 T 28-03-2018 IPR007428 MlaA lipoprotein GO:0016020 AM393_RS09410 0f996c2b08b9d0bca02ab07118ad91e0 99 Pfam PF13983 YsaB-like lipoprotein 25 99 6.4E-45 T 28-03-2018 IPR025728 YsaB-like lipoprotein AM393_RS25270 c816bb0f93053c217f754bfaf97acfc2 334 Pfam PF03595 Voltage-dependent anion channel 12 309 1.3E-39 T 28-03-2018 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 AM393_RS25270 c816bb0f93053c217f754bfaf97acfc2 334 TIGRFAM TIGR00816 tdt: C4-dicarboxylate transporter/malic acid transport protein 13 316 2.0E-96 T 28-03-2018 IPR011552 Tellurite resistance protein TehA/malic acid transport protein GO:0016021 AM393_RS11380 34e55d964c16bae689a83d3f6376ffb6 393 Gene3D G3DSA:3.90.20.10 35 135 5.4E-4 T 28-03-2018 AM393_RS11380 34e55d964c16bae689a83d3f6376ffb6 393 Pfam PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase 35 364 1.4E-130 T 28-03-2018 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX AM393_RS06515 784d31ad3d37596401f09fe6de2d6f28 150 Pfam PF12101 Protein of unknown function (DUF3577) 2 130 2.3E-54 T 28-03-2018 IPR021960 Protein of unknown function DUF3577 AM393_RS27530 44e1973aaeb530b4c65379d73804d548 178 Gene3D G3DSA:3.40.630.30 1 167 6.0E-36 T 28-03-2018 AM393_RS27530 44e1973aaeb530b4c65379d73804d548 178 SUPERFAMILY SSF55729 1 163 6.25E-34 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM393_RS27530 44e1973aaeb530b4c65379d73804d548 178 Pfam PF00583 Acetyltransferase (GNAT) family 33 137 2.1E-16 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AM393_RS19560 bf4a2e83c68c70ccec857fcc9fd98272 142 TIGRFAM TIGR03495 phage_LysB: phage lysis regulatory protein, LysB family 4 136 3.0E-49 T 28-03-2018 IPR020000 Bacteriophage P2, LysB AM393_RS22065 6aaf239c9e1fb388257286f3074a64cd 97 Gene3D G3DSA:3.40.50.360 1 89 9.1E-4 T 28-03-2018 IPR029039 Flavoprotein-like domain AM393_RS18730 eb162f12af2c86af2ac55b7e3e8d6a68 142 TIGRFAM TIGR02801 tolR: protein TolR 13 140 4.7E-39 T 28-03-2018 IPR014168 Biopolymer transport, TolR GO:0015031|GO:0016021 AM393_RS18730 eb162f12af2c86af2ac55b7e3e8d6a68 142 Pfam PF02472 Biopolymer transport protein ExbD/TolR 10 141 1.5E-23 T 28-03-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 AM393_RS08180 ba04bc8b34814228149d57dee7e8b7fe 92 Pfam PF03889 Domain of unknown function 9 45 9.8E-24 T 28-03-2018 IPR005589 Protein of unknown function DUF331 AM393_RS00175 61f3fcd434551b34b48652ebc98722d0 371 SUPERFAMILY SSF53822 27 368 1.93E-91 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AM393_RS00175 61f3fcd434551b34b48652ebc98722d0 371 Gene3D G3DSA:3.40.50.2300 21 208 2.5E-42 T 28-03-2018 AM393_RS00175 61f3fcd434551b34b48652ebc98722d0 371 Gene3D G3DSA:3.40.50.2300 209 355 6.7E-15 T 28-03-2018 AM393_RS00175 61f3fcd434551b34b48652ebc98722d0 371 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 282 295 5.3E-29 T 28-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AM393_RS00175 61f3fcd434551b34b48652ebc98722d0 371 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 332 347 5.3E-29 T 28-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AM393_RS00175 61f3fcd434551b34b48652ebc98722d0 371 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 69 87 5.3E-29 T 28-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AM393_RS00175 61f3fcd434551b34b48652ebc98722d0 371 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 28 44 5.3E-29 T 28-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AM393_RS00175 61f3fcd434551b34b48652ebc98722d0 371 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 50 66 5.3E-29 T 28-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AM393_RS00175 61f3fcd434551b34b48652ebc98722d0 371 Pfam PF13458 Periplasmic binding protein 28 366 1.7E-62 T 28-03-2018 IPR028081 Leucine-binding protein domain AM393_RS23190 9c16036dfc3b829c046c623829b103b1 139 Hamap MF_00546 Acid shock protein [asr]. 1 139 20.085 T 28-03-2018 IPR023497 Acid shock protein AM393_RS25490 79678b77ebfe945512d3a4f5b2e4aff4 674 Pfam PF04632 Fusaric acid resistance protein family 20 663 9.9E-174 T 28-03-2018 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 AM393_RS19375 cdd17f7330b2a3b1238a145c5a1dbda4 369 Gene3D G3DSA:2.120.10.30 16 270 2.0E-47 T 28-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like AM393_RS19375 cdd17f7330b2a3b1238a145c5a1dbda4 369 Gene3D G3DSA:2.120.10.30 271 361 5.0E-15 T 28-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like AM393_RS19375 cdd17f7330b2a3b1238a145c5a1dbda4 369 Pfam PF07995 Glucose / Sorbosone dehydrogenase 32 364 1.5E-129 T 28-03-2018 IPR012938 Glucose/Sorbosone dehydrogenase AM393_RS19375 cdd17f7330b2a3b1238a145c5a1dbda4 369 SUPERFAMILY SSF50952 23 368 8.11E-43 T 28-03-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 AM393_RS08005 2fa861a6c19e1f1201d8e9c5bfdf9a35 388 Pfam PF05065 Phage capsid family 102 382 2.4E-65 T 28-03-2018 IPR024455 Phage capsid AM393_RS08005 2fa861a6c19e1f1201d8e9c5bfdf9a35 388 TIGRFAM TIGR01554 major_cap_HK97: phage major capsid protein, HK97 family 5 382 3.3E-99 T 28-03-2018 IPR024455 Phage capsid AM393_RS08005 2fa861a6c19e1f1201d8e9c5bfdf9a35 388 Gene3D G3DSA:3.30.2400.10 123 275 2.0E-29 T 28-03-2018 AM393_RS08005 2fa861a6c19e1f1201d8e9c5bfdf9a35 388 SUPERFAMILY SSF56563 94 384 2.48E-64 T 28-03-2018 AM393_RS26225 c13211cc9792b2e4e207e707148b249f 335 Pfam PF01032 FecCD transport family 21 326 1.5E-86 T 28-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 AM393_RS26225 c13211cc9792b2e4e207e707148b249f 335 SUPERFAMILY SSF81345 7 326 8.24E-74 T 28-03-2018 IPR029022 ABC transporter, BtuC-like AM393_RS26225 c13211cc9792b2e4e207e707148b249f 335 Gene3D G3DSA:1.10.3470.10 3 335 2.7E-72 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AM393_RS09195 a0f2a3ad1560890b1a760bd509325575 62 ProDom PD053230 YHJR ECS4415 STY4179 CYTOPLASMIC 1 60 1.0E-19 T 28-03-2018 IPR024487 Cellulose biosynthesis protein BcsR AM393_RS09195 a0f2a3ad1560890b1a760bd509325575 62 Pfam PF10945 Cellulose biosynthesis protein BcsR 18 59 1.2E-22 T 28-03-2018 IPR024487 Cellulose biosynthesis protein BcsR AM393_RS14990 5da337a92b8c0f63b5535d94bd7831d4 268 Pfam PF11453 Protein of unknown function (DUF2950) 22 260 6.6E-77 T 28-03-2018 IPR021556 Protein of unknown function DUF2950 AM393_RS14120 6e2c20d136cd841853a3372b9c52b81f 224 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 151 165 4.7E-6 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS14120 6e2c20d136cd841853a3372b9c52b81f 224 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 181 4.7E-6 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS14120 6e2c20d136cd841853a3372b9c52b81f 224 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 193 4.7E-6 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS14120 6e2c20d136cd841853a3372b9c52b81f 224 Gene3D G3DSA:1.10.10.10 65 209 3.6E-10 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS14120 6e2c20d136cd841853a3372b9c52b81f 224 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 203 8.1E-13 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS14120 6e2c20d136cd841853a3372b9c52b81f 224 SUPERFAMILY SSF46894 139 204 2.55E-14 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM393_RS14120 6e2c20d136cd841853a3372b9c52b81f 224 SMART SM00421 148 205 1.1E-12 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM393_RS18065 d0b60fd2a3657a14309b0337cf8d4866 100 Gene3D G3DSA:3.30.2310.20 1 87 2.2E-14 T 28-03-2018 AM393_RS18065 d0b60fd2a3657a14309b0337cf8d4866 100 SUPERFAMILY SSF143011 1 80 5.89E-15 T 28-03-2018 IPR035095 Toxin RelE-like domain AM393_RS18065 d0b60fd2a3657a14309b0337cf8d4866 100 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 3 80 1.4E-7 T 28-03-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family AM393_RS06130 0bca647eed50e7cb7b76e55d82c2cadc 67 ProDom PD050163 YQGB INNER MEMBRANE STY3241 25 67 5.0E-6 T 28-03-2018 IPR020196 Uncharacterised protein family YqgB AM393_RS06130 0bca647eed50e7cb7b76e55d82c2cadc 67 Pfam PF11036 Virulence promoting factor 25 66 2.3E-13 T 28-03-2018 IPR020196 Uncharacterised protein family YqgB AM393_RS29020 64085292064006297e9baf63dc987199 141 Pfam PF03203 MerC mercury resistance protein 10 121 8.3E-19 T 28-03-2018 IPR004891 MerC mercury resistance protein AM393_RS29020 64085292064006297e9baf63dc987199 141 ProDom PD007347 MERC PLASMID MEMBRANE INNER UPTAKE MERCURY HGII RESISTANCE PRECURSOR TRANSMEMBRANE 21 141 1.0E-55 T 28-03-2018 IPR004891 MerC mercury resistance protein AM393_RS21415 580c255d2f27babf4ea7ae8ad972c721 236 Pfam PF09335 SNARE associated Golgi protein 80 197 5.0E-24 T 28-03-2018 IPR032816 SNARE associated Golgi protein AM393_RS19190 8f359b297af01cdf22583fc692f695be 204 Pfam PF01613 Flavin reductase like domain 23 166 8.1E-17 T 28-03-2018 IPR002563 Flavin reductase like domain GO:0010181 AM393_RS19190 8f359b297af01cdf22583fc692f695be 204 Gene3D G3DSA:2.30.110.10 11 188 1.4E-44 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 AM393_RS19190 8f359b297af01cdf22583fc692f695be 204 SUPERFAMILY SSF50475 2 188 3.88E-49 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 AM393_RS19190 8f359b297af01cdf22583fc692f695be 204 SMART SM00903 21 172 4.9E-17 T 28-03-2018 IPR002563 Flavin reductase like domain GO:0010181 AM393_RS03950 f36fede04c869d82c5742ca8af4d0772 169 Pfam PF13689 Domain of unknown function (DUF4154) 29 164 9.0E-31 T 28-03-2018 IPR025293 Protein of unknown function DUF4154 AM393_RS21035 649e62e9936641af9cdbb1c3d0bbe6fb 468 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 9 437 8.8E-165 T 28-03-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 AM393_RS21035 649e62e9936641af9cdbb1c3d0bbe6fb 468 PIRSF PIRSF006446 2 460 1.0E-215 T 28-03-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 AM393_RS28605 70f1dff5958f4a5ce9182e17d42e49af 575 SUPERFAMILY SSF52540 4 96 6.11E-22 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS28605 70f1dff5958f4a5ce9182e17d42e49af 575 SUPERFAMILY SSF52540 158 332 6.11E-22 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS28605 70f1dff5958f4a5ce9182e17d42e49af 575 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 26 321 9.9E-16 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AM393_RS28605 70f1dff5958f4a5ce9182e17d42e49af 575 Gene3D G3DSA:3.40.50.300 3 336 1.9E-23 T 28-03-2018 AM393_RS00315 9afdb41871afed5f085a283a8246224a 148 Hamap MF_00676 UPF0260 protein YcgN [ycgN]. 2 145 42.177 T 28-03-2018 IPR008228 Uncharacterised conserved protein UCP006173 AM393_RS00315 9afdb41871afed5f085a283a8246224a 148 Pfam PF03692 Putative zinc- or iron-chelating domain 24 92 3.3E-8 T 28-03-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein AM393_RS00315 9afdb41871afed5f085a283a8246224a 148 PIRSF PIRSF006173 1 145 1.9E-68 T 28-03-2018 IPR008228 Uncharacterised conserved protein UCP006173 AM393_RS04000 67df376d4b1167ad7f4a26d11ef244d1 263 Pfam PF01578 Cytochrome C assembly protein 36 261 1.5E-43 T 28-03-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 AM393_RS26570 1977db15cd85f6beb7f7ae50ef7e1168 98 Pfam PF03795 YCII-related domain 2 94 1.9E-25 T 28-03-2018 IPR005545 YCII-related AM393_RS26570 1977db15cd85f6beb7f7ae50ef7e1168 98 SUPERFAMILY SSF54909 2 98 5.77E-30 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel AM393_RS26570 1977db15cd85f6beb7f7ae50ef7e1168 98 Gene3D G3DSA:3.30.70.1060 1 98 1.8E-27 T 28-03-2018 AM393_RS10685 4fb37af62a66af13fa67a2da115b3dc4 168 Pfam PF04220 Der GTPase activator (YihI) 10 164 1.5E-55 T 28-03-2018 IPR007336 Der GTPase activator GO:0005096 AM393_RS10685 4fb37af62a66af13fa67a2da115b3dc4 168 Hamap MF_01058 Der GTPase-activating protein YihI [yihI]. 1 167 16.579 T 28-03-2018 IPR007336 Der GTPase activator GO:0005096 AM393_RS18625 ce433eaba40967d4f4e8a32fa6646016 241 Pfam PF06149 Protein of unknown function (DUF969) 7 225 1.0E-89 T 28-03-2018 IPR010374 Protein of unknown function DUF969 AM393_RS13295 df90b3625bb268b121502b1f21f10a98 147 Gene3D G3DSA:3.40.50.10110 1 147 1.4E-52 T 28-03-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 AM393_RS13295 df90b3625bb268b121502b1f21f10a98 147 Pfam PF04364 DNA polymerase III chi subunit, HolC 1 141 3.6E-39 T 28-03-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 AM393_RS13295 df90b3625bb268b121502b1f21f10a98 147 SUPERFAMILY SSF102400 1 145 5.89E-48 T 28-03-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 AM393_RS11065 ed65f798938a211cd1f421e554428d34 216 SUPERFAMILY SSF50814 32 216 2.17E-74 T 28-03-2018 IPR012674 Calycin AM393_RS11065 ed65f798938a211cd1f421e554428d34 216 Pfam PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment 37 216 7.5E-84 T 28-03-2018 IPR015304 ZinT domain GO:0008270 AM393_RS11065 ed65f798938a211cd1f421e554428d34 216 Gene3D G3DSA:2.40.128.20 29 216 8.4E-68 T 28-03-2018 IPR012674 Calycin AM393_RS08860 d1166b48a29e211cb935f545ed8e3f83 425 Pfam PF11862 Domain of unknown function (DUF3382) 7 103 4.7E-24 T 28-03-2018 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal AM393_RS08860 d1166b48a29e211cb935f545ed8e3f83 425 Pfam PF02653 Branched-chain amino acid transport system / permease component 112 398 3.2E-60 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AM393_RS08860 d1166b48a29e211cb935f545ed8e3f83 425 Gene3D G3DSA:1.10.3470.10 108 401 4.8E-48 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AM393_RS07870 195fb2e916bdc48240bfe0714173631e 162 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 9 154 2.4E-42 T 28-03-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 AM393_RS07870 195fb2e916bdc48240bfe0714173631e 162 PIRSF PIRSF018472 2 162 3.4E-58 T 28-03-2018 IPR026034 Cell shape-determining protein MreD, proteobacterial type AM393_RS07870 195fb2e916bdc48240bfe0714173631e 162 Pfam PF04093 rod shape-determining protein MreD 5 155 3.5E-45 T 28-03-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 AM393_RS12880 51d7ffb4698c6f0870df49082721624c 354 SUPERFAMILY SSF56281 35 302 2.1E-27 T 28-03-2018 IPR001279 Metallo-beta-lactamase AM393_RS12880 51d7ffb4698c6f0870df49082721624c 354 Pfam PF13483 Beta-lactamase superfamily domain 42 281 4.5E-15 T 28-03-2018 AM393_RS12880 51d7ffb4698c6f0870df49082721624c 354 Gene3D G3DSA:3.60.15.10 1 337 4.1E-49 T 28-03-2018 IPR001279 Metallo-beta-lactamase AM393_RS14090 76682b4bd9ee7bf2bf02c41da5c219a5 157 Hamap MF_01191 UPF0442 protein YjjB [yjjB]. 1 157 41.881 T 28-03-2018 IPR020914 Uncharacterised protein family UPF0442 AM393_RS14090 76682b4bd9ee7bf2bf02c41da5c219a5 157 Pfam PF12821 Threonine/Serine exporter, ThrE 13 147 1.6E-34 T 28-03-2018 IPR024528 Threonine/Serine exporter, ThrE AM393_RS05285 f694694ab901142cd77e0f9a9d42982c 210 PIRSF PIRSF010130 1 209 2.7E-83 T 28-03-2018 IPR008300 Phosphate propanoyltransferase GO:0016747 KEGG: 00561+2.3.1.22|KEGG: 00640+2.3.1.222|MetaCyc: PWY-5437|MetaCyc: PWY-7013|MetaCyc: PWY-7420 AM393_RS05285 f694694ab901142cd77e0f9a9d42982c 210 Pfam PF06130 Phosphate propanoyltransferase 23 101 7.6E-25 T 28-03-2018 IPR008300 Phosphate propanoyltransferase GO:0016747 KEGG: 00561+2.3.1.22|KEGG: 00640+2.3.1.222|MetaCyc: PWY-5437|MetaCyc: PWY-7013|MetaCyc: PWY-7420 AM393_RS05285 f694694ab901142cd77e0f9a9d42982c 210 Pfam PF06130 Phosphate propanoyltransferase 131 196 1.3E-16 T 28-03-2018 IPR008300 Phosphate propanoyltransferase GO:0016747 KEGG: 00561+2.3.1.22|KEGG: 00640+2.3.1.222|MetaCyc: PWY-5437|MetaCyc: PWY-7013|MetaCyc: PWY-7420 AM393_RS08800 3f2a3d841f7fd11daf38cd4862b5151f 162 Gene3D G3DSA:3.40.630.30 1 162 8.3E-38 T 28-03-2018 AM393_RS08800 3f2a3d841f7fd11daf38cd4862b5151f 162 SUPERFAMILY SSF55729 3 161 8.06E-39 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM393_RS08800 3f2a3d841f7fd11daf38cd4862b5151f 162 Pfam PF00583 Acetyltransferase (GNAT) family 36 136 3.0E-19 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AM393_RS16205 6fae9915f1fd1126cc560855b47644c8 181 Gene3D G3DSA:3.30.70.100 5 99 2.9E-15 T 28-03-2018 AM393_RS16205 6fae9915f1fd1126cc560855b47644c8 181 SUPERFAMILY SSF54909 4 96 2.37E-20 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel AM393_RS16205 6fae9915f1fd1126cc560855b47644c8 181 Pfam PF03992 Antibiotic biosynthesis monooxygenase 8 77 1.4E-7 T 28-03-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain AM393_RS25210 c00248e9125793291d30703c59190469 336 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 5 213 1.1E-41 T 28-03-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 AM393_RS25210 c00248e9125793291d30703c59190469 336 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 5 325 3.3E-96 T 28-03-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 AM393_RS22825 0b00ce9a45217566e19db7bd88daeff1 52 Pfam PF01679 Proteolipid membrane potential modulator 3 48 7.2E-18 T 28-03-2018 IPR000612 Proteolipid membrane potential modulator GO:0016021 AM393_RS22825 0b00ce9a45217566e19db7bd88daeff1 52 ProSitePatterns PS01309 Uncharacterized protein family UPF0057 signature. 7 22 - T 28-03-2018 IPR000612 Proteolipid membrane potential modulator GO:0016021 AM393_RS06300 eed63e699638e7bad029d63f66f89cab 132 Pfam PF03230 Antirestriction protein 43 132 3.7E-23 T 28-03-2018 IPR004914 Antirestriction protein AM393_RS06300 eed63e699638e7bad029d63f66f89cab 132 ProDom PD012854 PLASMID KLCA ANTIRESTRICTION YFJX YCIB ARDB STABLE YFEB Z1216 C0275 43 132 8.0E-12 T 28-03-2018 IPR004914 Antirestriction protein AM393_RS03795 f390d216be82f560710d41cfafa21ab5 159 PIRSF PIRSF004923 1 151 7.3E-41 T 28-03-2018 IPR026268 Protein RseC AM393_RS03795 f390d216be82f560710d41cfafa21ab5 159 Pfam PF04246 Positive regulator of sigma(E), RseC/MucC 8 139 2.2E-33 T 28-03-2018 IPR007359 Positive regulator of sigma(E), RseC/MucC AM393_RS14470 99816e1aed2c832aec8643a402f12d1b 121 Pfam PF05656 Protein of unknown function (DUF805) 15 119 1.2E-21 T 28-03-2018 IPR008523 Protein of unknown function DUF805 GO:0016021 AM393_RS22340 360d7d0332b5df771b633423b584c905 176 Pfam PF11745 Protein of unknown function (DUF3304) 30 148 2.2E-33 T 28-03-2018 IPR021733 Protein of unknown function DUF3304 AM393_RS19005 5663f1e2b15e88964545ff3e54de5f9e 240 PIRSF PIRSF006755 1 228 1.4E-81 T 28-03-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 AM393_RS19005 5663f1e2b15e88964545ff3e54de5f9e 240 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 6 176 2.1E-62 T 28-03-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 AM393_RS19005 5663f1e2b15e88964545ff3e54de5f9e 240 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 2 212 30.417 T 28-03-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 AM393_RS19005 5663f1e2b15e88964545ff3e54de5f9e 240 SUPERFAMILY SSF52540 3 211 1.24E-62 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS19005 5663f1e2b15e88964545ff3e54de5f9e 240 Pfam PF13500 AAA domain 4 210 1.3E-37 T 28-03-2018 AM393_RS19005 5663f1e2b15e88964545ff3e54de5f9e 240 Gene3D G3DSA:3.40.50.300 1 217 7.7E-59 T 28-03-2018 AM393_RS12675 771e3f6d6599c46a561155c8a5d2c887 43 Pfam PF08085 Entericidin EcnA/B family 22 41 1.5E-7 T 28-03-2018 IPR012556 Entericidin A/B GO:0009636|GO:0016020 AM393_RS20580 437b94c08fb2cae530effcd3acbd3648 160 Pfam PF06496 Protein of unknown function (DUF1097) 8 141 4.0E-39 T 28-03-2018 IPR009476 Protein of unknown function DUF1097 AM393_RS26895 24777b609bca51916c840d6b51fca600 471 Pfam PF06812 ImpA, N-terminal, type VI secretion system 8 111 4.7E-20 T 28-03-2018 IPR010657 ImpA, N-terminal AM393_RS26895 24777b609bca51916c840d6b51fca600 471 Pfam PF12486 Type VI secretion system, EvfB, or VasL 303 447 7.8E-52 T 28-03-2018 IPR021069 ImpA, C-terminal AM393_RS09065 9916bcb52a618be18cf5f9f40726d2d6 145 Gene3D G3DSA:3.40.50.620 2 142 1.4E-26 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM393_RS09065 9916bcb52a618be18cf5f9f40726d2d6 145 PIRSF PIRSF006276 1 141 1.7E-54 T 28-03-2018 IPR006015 Universal stress protein A AM393_RS09065 9916bcb52a618be18cf5f9f40726d2d6 145 Pfam PF00582 Universal stress protein family 3 138 2.6E-21 T 28-03-2018 IPR006016 UspA GO:0006950 AM393_RS09065 9916bcb52a618be18cf5f9f40726d2d6 145 SUPERFAMILY SSF52402 3 139 1.59E-32 T 28-03-2018 AM393_RS28830 533bed141d7c2a8bea73fdf6786e1b62 88 Pfam PF05713 Bacterial mobilisation protein (MobC) 17 57 5.7E-9 T 28-03-2018 IPR008687 Bacterial mobilisation AM393_RS02560 46cc0c4c9f74fa0c5e3a662aa934a147 429 Pfam PF07690 Major Facilitator Superfamily 23 381 1.4E-45 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM393_RS02560 46cc0c4c9f74fa0c5e3a662aa934a147 429 Gene3D G3DSA:1.20.1250.20 5 215 1.4E-35 T 28-03-2018 AM393_RS02560 46cc0c4c9f74fa0c5e3a662aa934a147 429 Gene3D G3DSA:1.20.1250.20 224 420 9.7E-18 T 28-03-2018 AM393_RS02560 46cc0c4c9f74fa0c5e3a662aa934a147 429 SUPERFAMILY SSF103473 9 415 1.83E-72 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS10590 3b77d9f29e08505cb6b3e2ae4973a39c 321 Gene3D G3DSA:1.10.3470.10 32 320 6.7E-39 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AM393_RS10590 3b77d9f29e08505cb6b3e2ae4973a39c 321 Pfam PF02653 Branched-chain amino acid transport system / permease component 45 313 2.0E-52 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AM393_RS24335 27bc9b972147754f1a9725b35c9d936c 140 Pfam PF00583 Acetyltransferase (GNAT) family 40 128 2.0E-11 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AM393_RS24335 27bc9b972147754f1a9725b35c9d936c 140 SUPERFAMILY SSF55729 1 133 5.4E-24 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM393_RS24335 27bc9b972147754f1a9725b35c9d936c 140 Gene3D G3DSA:3.40.630.30 1 137 3.7E-22 T 28-03-2018 AM393_RS19605 cde7b7ea73ac40924428e93f70416e9f 243 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 113 222 4.7E-7 T 28-03-2018 AM393_RS19605 cde7b7ea73ac40924428e93f70416e9f 243 Gene3D G3DSA:2.60.120.200 66 230 3.0E-8 T 28-03-2018 AM393_RS19605 cde7b7ea73ac40924428e93f70416e9f 243 SUPERFAMILY SSF49899 64 224 9.5E-7 T 28-03-2018 IPR013320 Concanavalin A-like lectin/glucanase domain AM393_RS00670 a8cd4db6e1fe63e59639db195f65478e 314 Gene3D G3DSA:3.40.50.1980 27 193 7.8E-45 T 28-03-2018 AM393_RS00670 a8cd4db6e1fe63e59639db195f65478e 314 Pfam PF01297 Zinc-uptake complex component A periplasmic 28 308 3.3E-59 T 28-03-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 AM393_RS00670 a8cd4db6e1fe63e59639db195f65478e 314 Gene3D G3DSA:3.40.50.1980 194 312 2.8E-26 T 28-03-2018 AM393_RS00670 a8cd4db6e1fe63e59639db195f65478e 314 SUPERFAMILY SSF53807 27 312 4.07E-77 T 28-03-2018 AM393_RS25945 9d2a08480d40e44f059d8c986957a5e4 158 Gene3D G3DSA:3.40.630.30 1 157 1.4E-22 T 28-03-2018 AM393_RS25945 9d2a08480d40e44f059d8c986957a5e4 158 Pfam PF13673 Acetyltransferase (GNAT) domain 30 135 1.7E-14 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AM393_RS25945 9d2a08480d40e44f059d8c986957a5e4 158 SUPERFAMILY SSF55729 1 139 4.88E-27 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM393_RS16130 c15c9c82303a7913ff21148300e9032a 177 PRINTS PR01100 Shikimate kinase family signature 29 42 5.3E-23 T 28-03-2018 AM393_RS16130 c15c9c82303a7913ff21148300e9032a 177 PRINTS PR01100 Shikimate kinase family signature 74 83 5.3E-23 T 28-03-2018 AM393_RS16130 c15c9c82303a7913ff21148300e9032a 177 PRINTS PR01100 Shikimate kinase family signature 57 65 5.3E-23 T 28-03-2018 AM393_RS16130 c15c9c82303a7913ff21148300e9032a 177 PRINTS PR01100 Shikimate kinase family signature 95 112 5.3E-23 T 28-03-2018 AM393_RS16130 c15c9c82303a7913ff21148300e9032a 177 PRINTS PR01100 Shikimate kinase family signature 5 20 5.3E-23 T 28-03-2018 AM393_RS16130 c15c9c82303a7913ff21148300e9032a 177 SUPERFAMILY SSF52540 3 168 1.27E-25 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM393_RS16130 c15c9c82303a7913ff21148300e9032a 177 ProSitePatterns PS01128 Shikimate kinase signature. 56 82 - T 28-03-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 AM393_RS16130 c15c9c82303a7913ff21148300e9032a 177 Hamap MF_00109 Shikimate kinase [aroK]. 2 169 24.566 T 28-03-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 AM393_RS16130 c15c9c82303a7913ff21148300e9032a 177 Pfam PF01202 Shikimate kinase 11 168 1.9E-43 T 28-03-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 AM393_RS16130 c15c9c82303a7913ff21148300e9032a 177 Gene3D G3DSA:3.40.50.300 1 174 1.1E-27 T 28-03-2018 AM393_RS19080 573be75a87f7e6f37df2cbef51dfb4a2 150 Pfam PF02391 MoaE protein 11 121 2.3E-35 T 28-03-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AM393_RS19080 573be75a87f7e6f37df2cbef51dfb4a2 150 Gene3D G3DSA:3.90.1170.40 2 149 9.6E-56 T 28-03-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AM393_RS19080 573be75a87f7e6f37df2cbef51dfb4a2 150 SUPERFAMILY SSF54690 5 150 1.03E-53 T 28-03-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AM393_RS19550 8f4c7448acc74b5e2b4550ef9786be3d 169 SUPERFAMILY SSF53955 10 168 3.43E-55 T 28-03-2018 IPR023346 Lysozyme-like domain AM393_RS19550 8f4c7448acc74b5e2b4550ef9786be3d 169 Pfam PF00959 Phage lysozyme 54 160 3.8E-21 T 28-03-2018 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 AM393_RS19550 8f4c7448acc74b5e2b4550ef9786be3d 169 Gene3D G3DSA:1.10.530.40 1 169 1.8E-50 T 28-03-2018 IPR023347 Lysozyme domain GO:0003796 AM393_RS23310 5b2f08d3fc11b69a717b005c41eb5790 224 Gene3D G3DSA:3.90.1680.10 1 222 1.8E-61 T 28-03-2018 IPR003738 SOS response associated peptidase (SRAP) AM393_RS23310 5b2f08d3fc11b69a717b005c41eb5790 224 SUPERFAMILY SSF143081 2 217 2.35E-59 T 28-03-2018 IPR003738 SOS response associated peptidase (SRAP) AM393_RS23310 5b2f08d3fc11b69a717b005c41eb5790 224 Pfam PF02586 SOS response associated peptidase (SRAP) 1 211 1.0E-48 T 28-03-2018 IPR003738 SOS response associated peptidase (SRAP) AM393_RS01315 dbd8a93336b3d057e10b706bac17d390 242 SUPERFAMILY SSF53955 20 52 1.08E-16 T 28-03-2018 IPR023346 Lysozyme-like domain AM393_RS01315 dbd8a93336b3d057e10b706bac17d390 242 SUPERFAMILY SSF53955 86 141 1.08E-16 T 28-03-2018 IPR023346 Lysozyme-like domain AM393_RS01315 dbd8a93336b3d057e10b706bac17d390 242 Gene3D G3DSA:1.10.530.10 10 193 2.0E-16 T 28-03-2018 AM393_RS01315 dbd8a93336b3d057e10b706bac17d390 242 Pfam PF01464 Transglycosylase SLT domain 14 149 7.4E-18 T 28-03-2018 IPR008258 Transglycosylase SLT domain 1 AM393_RS01340 6a77fc32d43287a8d1b079f072737264 357 Pfam PF04610 TrbL/VirB6 plasmid conjugal transfer protein 40 250 4.4E-43 T 28-03-2018 IPR007688 Plasmid conjugal transfer TrbL/VirB6 GO:0030255 AM393_RS02165 e346a1784ba655553b77c4f3bb6917ed 332 Gene3D G3DSA:3.40.50.2300 26 136 6.8E-16 T 28-03-2018 AM393_RS02165 e346a1784ba655553b77c4f3bb6917ed 332 Gene3D G3DSA:3.40.50.2300 137 332 2.0E-40 T 28-03-2018 AM393_RS02165 e346a1784ba655553b77c4f3bb6917ed 332 SUPERFAMILY SSF53822 25 328 7.26E-85 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AM393_RS02165 e346a1784ba655553b77c4f3bb6917ed 332 Pfam PF13407 Periplasmic binding protein domain 28 300 1.3E-64 T 28-03-2018 IPR025997 Periplasmic binding protein AM393_RS27880 66073f32ed5b8b96e37fc934d4c6f936 680 ProDom PD062361 VC1766 YFJM PM0595 601 673 2.0E-9 T 28-03-2018 AM393_RS27880 66073f32ed5b8b96e37fc934d4c6f936 680 Pfam PF03235 Protein of unknown function DUF262 13 214 6.7E-28 T 28-03-2018 IPR004919 Domain of unknown function DUF262 AM393_RS27880 66073f32ed5b8b96e37fc934d4c6f936 680 Pfam PF07510 Protein of unknown function (DUF1524) 555 671 1.9E-12 T 28-03-2018 IPR011089 Domain of unknown function DUF1524 AM393_RS05260 c61c452712e74387321494f0a716f057 174 Pfam PF02287 Dehydratase small subunit 41 171 2.5E-60 T 28-03-2018 IPR003207 Propanediol/glycerol dehydratase, small subunit KEGG: 00640+4.2.1.28|MetaCyc: PWY-7013 AM393_RS05260 c61c452712e74387321494f0a716f057 174 SUPERFAMILY SSF47148 40 174 9.68E-62 T 28-03-2018 IPR003207 Propanediol/glycerol dehydratase, small subunit KEGG: 00640+4.2.1.28|MetaCyc: PWY-7013 AM393_RS05260 c61c452712e74387321494f0a716f057 174 PIRSF PIRSF018505 1 174 1.5E-74 T 28-03-2018 IPR003207 Propanediol/glycerol dehydratase, small subunit KEGG: 00640+4.2.1.28|MetaCyc: PWY-7013 AM393_RS12680 3bb3b18c184b20527c07dde3a55dfb33 48 Pfam PF08085 Entericidin EcnA/B family 23 43 1.8E-8 T 28-03-2018 IPR012556 Entericidin A/B GO:0009636|GO:0016020 AM393_RS08060 470f00bec115500ea83b579bb890a390 94 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 27 76 8.0E-11 T 28-03-2018 IPR010260 DNA-binding transcriptional activator AlpA AM393_RS13625 8f9d350c645afe1f34e414edc2d73f7a 242 ProSitePatterns PS00552 MerR-type HTH domain signature. 6 29 - T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM393_RS13625 8f9d350c645afe1f34e414edc2d73f7a 242 SUPERFAMILY SSF46955 3 93 7.78E-20 T 28-03-2018 IPR009061 Putative DNA-binding domain AM393_RS13625 8f9d350c645afe1f34e414edc2d73f7a 242 Pfam PF13411 MerR HTH family regulatory protein 3 70 3.6E-18 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM393_RS13625 8f9d350c645afe1f34e414edc2d73f7a 242 Gene3D G3DSA:1.10.1660.10 1 150 1.6E-23 T 28-03-2018 AM393_RS13625 8f9d350c645afe1f34e414edc2d73f7a 242 SMART SM00422 3 72 9.1E-25 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM393_RS07185 e8b5fa110344e2ac22c52cdad76b843b 184 Pfam PF10688 Bacterial inner membrane protein 5 163 3.4E-56 T 28-03-2018 IPR019629 Uncharacterised protein family HI1736/YgjV AM393_RS07185 e8b5fa110344e2ac22c52cdad76b843b 184 PIRSF PIRSF011443 1 180 6.4E-73 T 28-03-2018 IPR026267 Inner membrane protein YgjV AM393_RS06680 c4b93db4691110ba7394ce596f566033 141 TIGRFAM TIGR02803 ExbD_1: TonB system transport protein ExbD 15 136 3.9E-67 T 28-03-2018 IPR014170 TonB system transport protein ExbD type-1 GO:0006810|GO:0016020 AM393_RS06680 c4b93db4691110ba7394ce596f566033 141 Pfam PF02472 Biopolymer transport protein ExbD/TolR 13 134 2.0E-31 T 28-03-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 AM393_RS16795 322e143a2fe668074c7ed3cfdba60702 159 Pfam PF04073 Aminoacyl-tRNA editing domain 31 146 8.4E-23 T 28-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AM393_RS16795 322e143a2fe668074c7ed3cfdba60702 159 PIRSF PIRSF006181 1 159 1.6E-59 T 28-03-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC AM393_RS16795 322e143a2fe668074c7ed3cfdba60702 159 SUPERFAMILY SSF55826 2 155 2.75E-45 T 28-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AM393_RS16795 322e143a2fe668074c7ed3cfdba60702 159 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 2 156 5.3E-57 T 28-03-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC AM393_RS16795 322e143a2fe668074c7ed3cfdba60702 159 Gene3D G3DSA:3.90.960.10 1 159 1.0E-43 T 28-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AM393_RS09345 32893d3260186d8fa92238e054587432 249 SUPERFAMILY SSF51658 4 248 1.76E-58 T 28-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AM393_RS09345 32893d3260186d8fa92238e054587432 249 Gene3D G3DSA:3.20.20.150 1 248 1.2E-26 T 28-03-2018 AM393_RS27460 1555357cc34d80e0334c1b997df5ce2a 126 Pfam PF04234 CopC domain 24 125 3.5E-23 T 28-03-2018 IPR007348 CopC domain GO:0005507|GO:0042597|GO:0046688 AM393_RS27460 1555357cc34d80e0334c1b997df5ce2a 126 SUPERFAMILY SSF81296 23 126 7.7E-30 T 28-03-2018 IPR014756 Immunoglobulin E-set AM393_RS27460 1555357cc34d80e0334c1b997df5ce2a 126 Gene3D G3DSA:2.60.40.1220 23 126 6.8E-28 T 28-03-2018 AM393_RS13250 be93ee2a156bfc0f1063723f89fce288 276 SUPERFAMILY SSF53613 1 270 8.73E-46 T 28-03-2018 IPR029056 Ribokinase-like AM393_RS13250 be93ee2a156bfc0f1063723f89fce288 276 Pfam PF00294 pfkB family carbohydrate kinase 10 269 3.8E-30 T 28-03-2018 IPR011611 Carbohydrate kinase PfkB AM393_RS13250 be93ee2a156bfc0f1063723f89fce288 276 Gene3D G3DSA:3.40.1190.20 1 274 5.3E-38 T 28-03-2018 IPR029056 Ribokinase-like AM393_RS05500 4bfa4e7e96c1ef96e20e3b61522712a9 308 SUPERFAMILY SSF46785 3 84 9.25E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS05500 4bfa4e7e96c1ef96e20e3b61522712a9 308 Pfam PF03466 LysR substrate binding domain 92 294 9.6E-44 T 28-03-2018 IPR005119 LysR, substrate-binding AM393_RS05500 4bfa4e7e96c1ef96e20e3b61522712a9 308 Gene3D G3DSA:3.40.190.10 184 266 4.3E-24 T 28-03-2018 AM393_RS05500 4bfa4e7e96c1ef96e20e3b61522712a9 308 Gene3D G3DSA:3.40.190.10 93 183 4.8E-23 T 28-03-2018 AM393_RS05500 4bfa4e7e96c1ef96e20e3b61522712a9 308 SUPERFAMILY SSF53850 93 298 1.55E-42 T 28-03-2018 AM393_RS05500 4bfa4e7e96c1ef96e20e3b61522712a9 308 Gene3D G3DSA:1.10.10.10 1 89 1.2E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS05500 4bfa4e7e96c1ef96e20e3b61522712a9 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 2.9E-19 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS05500 4bfa4e7e96c1ef96e20e3b61522712a9 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 2.1E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS05500 4bfa4e7e96c1ef96e20e3b61522712a9 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 2.1E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS05500 4bfa4e7e96c1ef96e20e3b61522712a9 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 2.1E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM393_RS22800 57a9702307da05e256feb6fad1af20a9 476 Pfam PF00324 Amino acid permease 28 459 8.6E-92 T 28-03-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 AM393_RS22800 57a9702307da05e256feb6fad1af20a9 476 PIRSF PIRSF006060 2 475 7.2E-68 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AM393_RS08580 09cabcc56b263d90ce1f4496e5e1e5bd 266 SUPERFAMILY SSF53067 62 164 1.29E-5 T 28-03-2018 AM393_RS08580 09cabcc56b263d90ce1f4496e5e1e5bd 266 Gene3D G3DSA:3.30.420.40 4 159 1.1E-9 T 28-03-2018 AM393_RS28350 22f68c20039c9649e75b3920a26f37e0 60 Gene3D G3DSA:3.30.920.30 1 60 1.1E-18 T 28-03-2018 AM393_RS28350 22f68c20039c9649e75b3920a26f37e0 60 Pfam PF07927 HicA toxin of bacterial toxin-antitoxin, 4 60 3.6E-16 T 28-03-2018 IPR012933 HicA mRNA interferase family GO:0003729 AM393_RS28350 22f68c20039c9649e75b3920a26f37e0 60 SUPERFAMILY SSF54786 1 60 4.71E-14 T 28-03-2018 AM393_RS19330 d6611b45d31c43ad6a3076a1020333bd 313 Gene3D G3DSA:3.60.20.30 179 313 4.3E-51 T 28-03-2018 AM393_RS19330 d6611b45d31c43ad6a3076a1020333bd 313 SUPERFAMILY SSF56235 4 310 1.95E-97 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AM393_RS19330 d6611b45d31c43ad6a3076a1020333bd 313 Pfam PF01112 Asparaginase 5 311 7.8E-118 T 28-03-2018 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 AM393_RS12685 605d08edae34f28c2fe27b2dbe406e3b 105 Pfam PF00893 Small Multidrug Resistance protein 1 93 9.6E-32 T 28-03-2018 IPR000390 Small multidrug resistance protein family GO:0016021 AM393_RS12685 605d08edae34f28c2fe27b2dbe406e3b 105 SUPERFAMILY SSF103481 5 102 2.22E-20 T 28-03-2018 AM393_RS22150 c7c0eb4a4e9f1d4bc82f27a1995f8db3 313 Pfam PF09950 Uncharacterized protein conserved in bacteria (DUF2184) 73 313 1.3E-80 T 28-03-2018 IPR020049 Protein of unknown function DUF2184 AM393_RS22150 c7c0eb4a4e9f1d4bc82f27a1995f8db3 313 PIRSF PIRSF029202 2 313 1.9E-100 T 28-03-2018 IPR020049 Protein of unknown function DUF2184 AM393_RS12995 d4bd053ca65f45856d89d0945731abca 185 Gene3D G3DSA:3.40.30.10 49 182 6.7E-6 T 28-03-2018 AM393_RS12995 d4bd053ca65f45856d89d0945731abca 185 Pfam PF09695 Bacterial protein of unknown function (YtfJ_HI0045) 25 181 1.9E-78 T 28-03-2018 IPR006513 Conserved hypothetical protein CHP01626, YtfJ AM393_RS12995 d4bd053ca65f45856d89d0945731abca 185 TIGRFAM TIGR01626 ytfJ_HI0045: conserved hypothetical protein YtfJ-family, TIGR01626 1 183 3.4E-91 T 28-03-2018 IPR006513 Conserved hypothetical protein CHP01626, YtfJ AM393_RS14995 a48ef116af516d3a9dba68ac1cdf22b2 535 Pfam PF11737 Protein of unknown function (DUF3300) 59 328 8.2E-88 T 28-03-2018 IPR021728 Protein of unknown function DUF3300 AM393_RS26395 26e00a6124b9b530c0b38666efd202ca 106 Gene3D G3DSA:3.40.190.10 1 106 1.4E-4 T 28-03-2018 AM393_RS28370 ec033e8f61835a1b3d5a6fac26cb57aa 85 Gene3D G3DSA:1.10.260.40 1 81 3.5E-11 T 28-03-2018 AM393_RS28370 ec033e8f61835a1b3d5a6fac26cb57aa 85 SUPERFAMILY SSF47413 1 55 5.35E-11 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM393_RS28370 ec033e8f61835a1b3d5a6fac26cb57aa 85 Pfam PF13560 Helix-turn-helix domain 2 42 3.3E-7 T 28-03-2018 AM393_RS02800 be0aa013116ef834f116236922e78f32 228 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 7 114 1.2E-19 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AM393_RS02800 be0aa013116ef834f116236922e78f32 228 SUPERFAMILY SSF161098 7 205 5.49E-38 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS02800 be0aa013116ef834f116236922e78f32 228 Gene3D G3DSA:1.10.3720.10 2 224 1.1E-38 T 28-03-2018 AM393_RS02800 be0aa013116ef834f116236922e78f32 228 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 29 220 2.7E-23 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS09830 1e18a848e81924422d4d726a5b472ae2 200 Pfam PF07305 Protein of unknown function (DUF1454) 21 193 4.4E-82 T 28-03-2018 IPR009918 Protein of unknown function DUF1454 AM393_RS05725 beb0bda58d58155ce9b6d8437268e456 76 Pfam PF06902 Divergent 4Fe-4S mono-cluster 13 76 6.7E-28 T 28-03-2018 IPR010693 Divergent 4Fe-4S mono-cluster AM393_RS28305 0281b7452aecfefbd9d8e6977dc8e985 145 Pfam PF03230 Antirestriction protein 48 145 3.2E-24 T 28-03-2018 IPR004914 Antirestriction protein AM393_RS28305 0281b7452aecfefbd9d8e6977dc8e985 145 ProDom PD012854 PLASMID KLCA ANTIRESTRICTION YFJX YCIB ARDB STABLE YFEB Z1216 C0275 49 145 2.0E-24 T 28-03-2018 IPR004914 Antirestriction protein AM393_RS15995 b28913985d4eaa9e7061636c6acc4708 378 SUPERFAMILY SSF53822 28 370 2.59E-75 T 28-03-2018 IPR028082 Periplasmic binding protein-like I AM393_RS15995 b28913985d4eaa9e7061636c6acc4708 378 Pfam PF13458 Periplasmic binding protein 28 369 8.6E-50 T 28-03-2018 IPR028081 Leucine-binding protein domain AM393_RS15995 b28913985d4eaa9e7061636c6acc4708 378 Gene3D G3DSA:3.40.50.2300 15 193 6.4E-32 T 28-03-2018 AM393_RS15995 b28913985d4eaa9e7061636c6acc4708 378 Gene3D G3DSA:3.40.50.2300 194 358 1.6E-21 T 28-03-2018 AM393_RS17715 539360e79819effa72175c2327afe483 156 Pfam PF03830 PTS system sorbose subfamily IIB component 2 147 1.2E-44 T 28-03-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 AM393_RS17715 539360e79819effa72175c2327afe483 156 SUPERFAMILY SSF52728 1 154 2.35E-42 T 28-03-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 AM393_RS17715 539360e79819effa72175c2327afe483 156 Gene3D G3DSA:3.40.35.10 1 156 2.0E-47 T 28-03-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 AM393_RS06225 c62a94c9c07aebd7b0f5c8b070564baa 108 Pfam PF04320 Protein with unknown function (DUF469) 7 107 2.8E-42 T 28-03-2018 IPR007416 Protein of unknown function DUF469 AM393_RS22085 c287c98a0907c6c66920d134345e6dd1 260 Gene3D G3DSA:2.10.230.10 91 177 4.6E-7 T 28-03-2018 AM393_RS22085 c287c98a0907c6c66920d134345e6dd1 260 Pfam PF03589 Antitermination protein 167 251 3.5E-20 T 28-03-2018 IPR003222 Antitermination protein GO:0003677|GO:0006355 AM393_RS22085 c287c98a0907c6c66920d134345e6dd1 260 Pfam PF03589 Antitermination protein 24 109 3.5E-23 T 28-03-2018 IPR003222 Antitermination protein GO:0003677|GO:0006355 AM393_RS19150 dc9b7a0f1b2e4143e2d52ba1d6bd0bfa 281 SUPERFAMILY SSF52518 11 278 6.96E-76 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold AM393_RS19150 dc9b7a0f1b2e4143e2d52ba1d6bd0bfa 281 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 15 267 6.8E-41 T 28-03-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AM393_RS19150 dc9b7a0f1b2e4143e2d52ba1d6bd0bfa 281 Gene3D G3DSA:3.40.50.970 1 279 4.6E-59 T 28-03-2018 AM393_RS08000 8b28c765cff4ede4a73ecc8d3b8a12e1 186 Pfam PF04586 Caudovirus prohead serine protease 6 163 2.4E-48 T 28-03-2018 IPR006433 Prohead protease AM393_RS08000 8b28c765cff4ede4a73ecc8d3b8a12e1 186 Gene3D G3DSA:3.20.16.10 14 183 1.8E-37 T 28-03-2018 IPR035443 Herpesvirus/Caudovirus protease domain AM393_RS08000 8b28c765cff4ede4a73ecc8d3b8a12e1 186 TIGRFAM TIGR01543 proheadase_HK97: phage prohead protease, HK97 family 19 162 5.3E-42 T 28-03-2018 IPR006433 Prohead protease AM393_RS15805 e749ae6f60bc43ff9d9c7587bb2558a9 106 Pfam PF17345 Family of unknown function (DUF5375) 1 106 1.1E-60 T 28-03-2018 IPR035317 Protein of unknown function DUF5375 AM393_RS15805 e749ae6f60bc43ff9d9c7587bb2558a9 106 ProDom PD070475 P4 PHAGE PROPHAGE-DERIVED CNR-LIKE ORF106 T2655 20 106 4.0E-43 T 28-03-2018 IPR035317 Protein of unknown function DUF5375 AM393_RS09525 13f21447056d9cf04ca5c231994a4336 382 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 1 123 7.7E-27 T 28-03-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 AM393_RS09525 13f21447056d9cf04ca5c231994a4336 382 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 150 162 - T 28-03-2018 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AM393_RS09525 13f21447056d9cf04ca5c231994a4336 382 Gene3D G3DSA:1.10.1040.10 207 381 7.8E-48 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AM393_RS09525 13f21447056d9cf04ca5c231994a4336 382 Hamap MF_00196 Mannitol-1-phosphate 5-dehydrogenase [mtlD]. 1 378 41.748 T 28-03-2018 IPR023028 Mannitol-1-phosphate 5-dehydrogenase GO:0008926|GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AM393_RS09525 13f21447056d9cf04ca5c231994a4336 382 PRINTS PR00084 Mannitol dehydrogenase signature 3 13 1.2E-17 T 28-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AM393_RS09525 13f21447056d9cf04ca5c231994a4336 382 PRINTS PR00084 Mannitol dehydrogenase signature 150 163 1.2E-17 T 28-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AM393_RS09525 13f21447056d9cf04ca5c231994a4336 382 PRINTS PR00084 Mannitol dehydrogenase signature 114 127 1.2E-17 T 28-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AM393_RS09525 13f21447056d9cf04ca5c231994a4336 382 PRINTS PR00084 Mannitol dehydrogenase signature 170 185 1.2E-17 T 28-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AM393_RS09525 13f21447056d9cf04ca5c231994a4336 382 SUPERFAMILY SSF48179 204 373 4.76E-45 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AM393_RS09525 13f21447056d9cf04ca5c231994a4336 382 Gene3D G3DSA:3.40.50.720 75 196 2.2E-27 T 28-03-2018 AM393_RS09525 13f21447056d9cf04ca5c231994a4336 382 Gene3D G3DSA:3.40.50.720 1 74 9.9E-7 T 28-03-2018 AM393_RS09525 13f21447056d9cf04ca5c231994a4336 382 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 149 371 5.9E-69 T 28-03-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 AM393_RS09525 13f21447056d9cf04ca5c231994a4336 382 SUPERFAMILY SSF51735 1 203 2.71E-43 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS18380 322788dc9f01486cf59adc71f3ca63e8 224 SUPERFAMILY SSF161098 14 210 1.28E-38 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS18380 322788dc9f01486cf59adc71f3ca63e8 224 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 223 4.0E-18 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM393_RS18380 322788dc9f01486cf59adc71f3ca63e8 224 Gene3D G3DSA:1.10.3720.10 1 224 6.8E-41 T 28-03-2018 AM393_RS18380 322788dc9f01486cf59adc71f3ca63e8 224 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 13 118 1.3E-23 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AM393_RS24575 b95ddc2f56050f9ca98041bbd5ba9c3e 144 Pfam PF04657 Putative inner membrane exporter, YdcZ 4 140 1.7E-31 T 28-03-2018 IPR006750 Putative inner membrane exporter, YdcZ AM393_RS07435 529e6fdd4be44d61d41219cf4cca7025 292 Pfam PF01136 Peptidase family U32 93 211 5.2E-12 T 28-03-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 AM393_RS19105 6cd6d5f1083f277689c9a81f3601b1f9 145 Pfam PF11076 Putative inner membrane protein YbhQ 1 126 4.7E-71 T 28-03-2018 IPR021303 Uncharacterised protein family, inner membrane, YbhQ AM393_RS04810 25c0d0b428f160573d945cffbbeb5c71 253 Pfam PF01975 Survival protein SurE 3 180 4.3E-57 T 28-03-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 AM393_RS04810 25c0d0b428f160573d945cffbbeb5c71 253 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 1 249 40.211 T 28-03-2018 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 AM393_RS04810 25c0d0b428f160573d945cffbbeb5c71 253 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 1 232 2.5E-77 T 28-03-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 AM393_RS04810 25c0d0b428f160573d945cffbbeb5c71 253 Gene3D G3DSA:3.40.1210.10 1 247 6.4E-82 T 28-03-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 AM393_RS04810 25c0d0b428f160573d945cffbbeb5c71 253 SUPERFAMILY SSF64167 1 247 3.92E-83 T 28-03-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 AM393_RS06475 897c478af41cf4405a9d8c8070ded934 252 TIGRFAM TIGR03747 conj_TIGR03747: integrating conjugative element membrane protein, PFL_4697 family 21 252 7.7E-93 T 28-03-2018 IPR022266 Integrating conjugative element protein, PFL4697-type AM393_RS06475 897c478af41cf4405a9d8c8070ded934 252 Pfam PF14348 Domain of unknown function (DUF4400) 57 249 1.5E-71 T 28-03-2018 IPR022266 Integrating conjugative element protein, PFL4697-type AM393_RS20425 ae9b65a2c407252b0d83c2753dd7496b 57 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 10 30 3.0E-10 T 28-03-2018 IPR019626 Stress-induced protein, KGG, repeat AM393_RS20425 ae9b65a2c407252b0d83c2753dd7496b 57 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 32 52 1.0E-9 T 28-03-2018 IPR019626 Stress-induced protein, KGG, repeat AM393_RS12595 431d3e620fac511585161098683b83c0 416 Pfam PF13520 Amino acid permease 9 379 3.1E-29 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AM393_RS12595 431d3e620fac511585161098683b83c0 416 PIRSF PIRSF006060 1 414 9.5E-54 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AM393_RS17640 6b29737afd035ca53f1ab09de6b99943 225 Gene3D G3DSA:2.60.40.10 22 147 3.1E-12 T 28-03-2018 IPR013783 Immunoglobulin-like fold AM393_RS12555 17a8e47947960e81f47bf593650f92c3 695 Pfam PF06674 Protein of unknown function (DUF1176) 27 336 1.8E-89 T 28-03-2018 IPR009560 Protein of unknown function DUF1176 AM393_RS28120 e93516bc438998162e2e5d871ccb9382 192 Gene3D G3DSA:1.10.260.40 2 80 1.9E-6 T 28-03-2018 AM393_RS12045 80ddae39cc317d47be4e900823d3b059 165 Hamap MF_01632 Chorismate pyruvate-lyase [ubiC]. 12 165 25.388 T 28-03-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745 AM393_RS12045 80ddae39cc317d47be4e900823d3b059 165 SUPERFAMILY SSF64288 8 165 1.78E-44 T 28-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AM393_RS12045 80ddae39cc317d47be4e900823d3b059 165 Pfam PF04345 Chorismate lyase 18 165 2.5E-33 T 28-03-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745 AM393_RS12045 80ddae39cc317d47be4e900823d3b059 165 Gene3D G3DSA:3.40.1410.10 2 165 6.5E-44 T 28-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AM393_RS09115 88150e19ffc5cfa83b97a5a2c2ab9d2c 177 Pfam PF13302 Acetyltransferase (GNAT) domain 8 146 1.4E-23 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AM393_RS09115 88150e19ffc5cfa83b97a5a2c2ab9d2c 177 Gene3D G3DSA:3.40.630.30 1 176 4.6E-32 T 28-03-2018 AM393_RS09115 88150e19ffc5cfa83b97a5a2c2ab9d2c 177 SUPERFAMILY SSF55729 1 171 2.24E-41 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM393_RS24465 bf0be4a92869f43c2dc012be932062ac 370 Pfam PF13265 Protein of unknown function (DUF4056) 38 301 7.7E-130 T 28-03-2018 IPR025130 Protein of unknown function DUF4056 AM393_RS23120 0208ab6b10dc25127ba497e434e3e6f5 205 Pfam PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG 6 199 1.2E-52 T 28-03-2018 IPR017557 Phosphoribosyl-dephospho-CoA transferase GO:0016779 MetaCyc: PWY-5796 AM393_RS23120 0208ab6b10dc25127ba497e434e3e6f5 205 TIGRFAM TIGR03135 malonate_mdcG: malonate decarboxylase holo-[acyl-carrier-protein] synthase 6 199 1.6E-49 T 28-03-2018 IPR017557 Phosphoribosyl-dephospho-CoA transferase GO:0016779 MetaCyc: PWY-5796 AM393_RS23120 0208ab6b10dc25127ba497e434e3e6f5 205 Hamap MF_00650 Phosphoribosyl-dephospho-CoA transferase [mdcG]. 4 205 35.208 T 28-03-2018 IPR017557 Phosphoribosyl-dephospho-CoA transferase GO:0016779 MetaCyc: PWY-5796 AM393_RS20855 9743b528cfa3f46f074c164018200da8 85 Gene3D G3DSA:3.30.1660.10 21 85 1.5E-21 T 28-03-2018 IPR025543 Dodecin-like AM393_RS20855 9743b528cfa3f46f074c164018200da8 85 SUPERFAMILY SSF159871 3 85 3.92E-24 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 AM393_RS20855 9743b528cfa3f46f074c164018200da8 85 Pfam PF07338 Protein of unknown function (DUF1471) 34 85 1.7E-19 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 AM393_RS28180 f06071f96b77efc9fe7bcfa32e5b3f03 367 Pfam PF12293 Putative outer membrane core complex of type IVb secretion 119 361 9.5E-73 T 28-03-2018 IPR022073 Putative outer membrane core complex of type IVb secretion AM393_RS28395 055ec513875125e50f4cf257eeb72aef 341 Pfam PF01548 Transposase 6 146 5.1E-16 T 28-03-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 AM393_RS28395 055ec513875125e50f4cf257eeb72aef 341 Pfam PF02371 Transposase IS116/IS110/IS902 family 212 289 9.2E-26 T 28-03-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 AM393_RS22135 acbead572a00feb49e52561520f2350f 182 Pfam PF04233 Phage Mu protein F like protein 66 171 2.7E-12 T 28-03-2018 IPR006528 Phage head morphogenesis domain AM393_RS19580 9f8b98d3cdfd6c1de3574c57b5689564 190 Pfam PF04717 Type VI secretion system, phage-baseplate injector 7 115 6.2E-43 T 28-03-2018 IPR006531 Gp5 N-terminal AM393_RS19580 9f8b98d3cdfd6c1de3574c57b5689564 190 TIGRFAM TIGR01644 phage_P2_V: phage baseplate assembly protein V 8 188 9.4E-61 T 28-03-2018 IPR013046 Phage baseplate assembly protein V/Gp45 AM393_RS18590 299f56908018fb2b603ed65f8b95e5c7 68 Pfam PF10725 Protein of unknown function (DUF2517) 4 64 5.8E-33 T 28-03-2018 IPR019663 Uncharacterised protein YbfA AM393_RS24415 49449a57a4a9899f7ad7b48a05130275 263 Pfam PF01925 Sulfite exporter TauE/SafE 7 260 5.3E-33 T 28-03-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 AM393_RS25385 e0e9825f6a1cadfdd3dd164f5716e6fe 146 Pfam PF10754 Protein of unknown function (DUF2569) 7 144 5.5E-40 T 28-03-2018 IPR019690 Protein of unknown function DUF2569 AM393_RS01550 ee009c1bd8794c45636af3be1671ebb3 246 Gene3D G3DSA:3.30.930.10 25 245 4.7E-26 T 28-03-2018 AM393_RS01550 ee009c1bd8794c45636af3be1671ebb3 246 SUPERFAMILY SSF55681 29 227 1.16E-37 T 28-03-2018 AM393_RS22130 e3ef906f6a3a42a3d79feb5d42406e79 483 Pfam PF06381 Protein of unknown function (DUF1073) 48 396 1.6E-107 T 28-03-2018 IPR024459 Protein of unknown function DUF1073 AM393_RS22130 e3ef906f6a3a42a3d79feb5d42406e79 483 TIGRFAM TIGR01555 phge_rel_HI1409: phage-associated protein, HI1409 family 13 397 1.8E-77 T 28-03-2018 IPR006445 Phage-associated protein HI1409 AM393_RS28225 7c70fb589b0bee0d8cd2d677063a26a4 714 TIGRFAM TIGR04346 DotA_TraY: conjugal transfer/type IV secretion protein DotA/TraY 40 665 1.5E-134 T 28-03-2018 IPR027628 Conjugal transfer/type IV secretion protein DotA/TraY AM393_RS28225 7c70fb589b0bee0d8cd2d677063a26a4 714 Gene3D G3DSA:1.20.5.1230 150 694 0.0016 T 28-03-2018 AM393_RS25090 ba3bb47996f30c5bec60fc0eff500aca 568 Gene3D G3DSA:2.30.40.10 4 92 2.5E-15 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM393_RS25090 ba3bb47996f30c5bec60fc0eff500aca 568 Gene3D G3DSA:3.20.20.140 191 523 2.9E-33 T 28-03-2018 AM393_RS25090 ba3bb47996f30c5bec60fc0eff500aca 568 Pfam PF07969 Amidohydrolase family 54 566 5.6E-70 T 28-03-2018 IPR013108 Amidohydrolase 3 AM393_RS25090 ba3bb47996f30c5bec60fc0eff500aca 568 SUPERFAMILY SSF51556 67 126 1.76E-18 T 28-03-2018 IPR032466 Metal-dependent hydrolase AM393_RS25090 ba3bb47996f30c5bec60fc0eff500aca 568 SUPERFAMILY SSF51556 207 526 1.76E-18 T 28-03-2018 IPR032466 Metal-dependent hydrolase AM393_RS25090 ba3bb47996f30c5bec60fc0eff500aca 568 SUPERFAMILY SSF51338 6 66 7.13E-24 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM393_RS25090 ba3bb47996f30c5bec60fc0eff500aca 568 SUPERFAMILY SSF51338 525 566 7.13E-24 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM393_RS28640 f53c15f22d0cf5138ef0e3d5a249d25e 429 PRINTS PR00758 Arsenical pump membrane protein signature 101 125 4.2E-123 T 28-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 AM393_RS28640 f53c15f22d0cf5138ef0e3d5a249d25e 429 PRINTS PR00758 Arsenical pump membrane protein signature 364 389 4.2E-123 T 28-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 AM393_RS28640 f53c15f22d0cf5138ef0e3d5a249d25e 429 PRINTS PR00758 Arsenical pump membrane protein signature 323 345 4.2E-123 T 28-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 AM393_RS28640 f53c15f22d0cf5138ef0e3d5a249d25e 429 PRINTS PR00758 Arsenical pump membrane protein signature 144 168 4.2E-123 T 28-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 AM393_RS28640 f53c15f22d0cf5138ef0e3d5a249d25e 429 PRINTS PR00758 Arsenical pump membrane protein signature 278 302 4.2E-123 T 28-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 AM393_RS28640 f53c15f22d0cf5138ef0e3d5a249d25e 429 PRINTS PR00758 Arsenical pump membrane protein signature 177 200 4.2E-123 T 28-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 AM393_RS28640 f53c15f22d0cf5138ef0e3d5a249d25e 429 PRINTS PR00758 Arsenical pump membrane protein signature 217 242 4.2E-123 T 28-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 AM393_RS28640 f53c15f22d0cf5138ef0e3d5a249d25e 429 PRINTS PR00758 Arsenical pump membrane protein signature 397 421 4.2E-123 T 28-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 AM393_RS28640 f53c15f22d0cf5138ef0e3d5a249d25e 429 TIGRFAM TIGR00935 2a45: arsenite/antimonite efflux pump membrane protein 3 426 1.6E-219 T 28-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 AM393_RS28640 f53c15f22d0cf5138ef0e3d5a249d25e 429 Pfam PF02040 Arsenical pump membrane protein 3 423 1.1E-159 T 28-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 AM393_RS21130 4a3253020163fe60b0b3e466e76b1601 79 Pfam PF03891 Domain of unknown function (DUF333) 28 74 7.4E-17 T 28-03-2018 IPR005590 Protein of unknown function DUF333 AM393_RS28280 052dae2c71ba1f95cb2f412d45c7c346 642 Pfam PF03432 Relaxase/Mobilisation nuclease domain 52 307 4.2E-36 T 28-03-2018 IPR005094 Endonuclease relaxase, MobA/VirD2 AM393_RS01495 a0f9fe2a42f4a04b6f5eeba0150930b2 367 Gene3D G3DSA:3.90.1200.10 76 300 2.4E-11 T 28-03-2018 AM393_RS01495 a0f9fe2a42f4a04b6f5eeba0150930b2 367 SUPERFAMILY SSF56112 29 223 4.1E-14 T 28-03-2018 IPR011009 Protein kinase-like domain AM393_RS23870 d38ab4b25b1a6a88d06710bb43d9321f 247 Pfam PF01925 Sulfite exporter TauE/SafE 10 239 2.3E-32 T 28-03-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 AM393_RS22810 bb36324e895799142982121253765fab 263 Gene3D G3DSA:1.10.3620.10 150 254 4.3E-35 T 28-03-2018 AM393_RS22810 bb36324e895799142982121253765fab 263 Pfam PF02698 DUF218 domain 39 172 1.2E-13 T 28-03-2018 IPR003848 Domain of unknown function DUF218 AM393_RS24870 b4f74e77939e27f0c2bac0c18e07b715 292 SUPERFAMILY SSF103481 48 140 8.5E-6 T 28-03-2018 AM393_RS24870 b4f74e77939e27f0c2bac0c18e07b715 292 SUPERFAMILY SSF103481 190 289 2.88E-7 T 28-03-2018 AM393_RS24870 b4f74e77939e27f0c2bac0c18e07b715 292 Pfam PF00892 EamA-like transporter family 158 285 2.3E-7 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM393_RS09130 020fd8ab00ff11f91b90307473720679 343 TIGRFAM TIGR00766 TIGR00766: inner membrane protein YhjD 58 332 6.1E-128 T 28-03-2018 IPR005274 Inner membrane protein YhjD AM393_RS09130 020fd8ab00ff11f91b90307473720679 343 PIRSF PIRSF035875 43 341 6.9E-26 T 28-03-2018 IPR017039 Virulence factor BrkB AM393_RS09130 020fd8ab00ff11f91b90307473720679 343 Pfam PF03631 Virulence factor BrkB 72 331 5.6E-50 T 28-03-2018 IPR017039 Virulence factor BrkB AM393_RS01625 225007263517573830f79a4391592976 103 Pfam PF12840 Helix-turn-helix domain 15 73 7.7E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS01625 225007263517573830f79a4391592976 103 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 49 64 3.1E-7 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM393_RS01625 225007263517573830f79a4391592976 103 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 17 32 3.1E-7 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM393_RS01625 225007263517573830f79a4391592976 103 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 64 79 3.1E-7 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM393_RS01625 225007263517573830f79a4391592976 103 SUPERFAMILY SSF46785 3 93 1.97E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS01625 225007263517573830f79a4391592976 103 Gene3D G3DSA:1.10.10.10 2 101 1.4E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS01625 225007263517573830f79a4391592976 103 SMART SM00418 15 93 3.7E-9 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM393_RS19630 2c89414f91c3b4b4d12f7412f36daf3e 99 Pfam PF10109 Phage tail assembly chaperone proteins, E, or 41 or 14 8 87 7.4E-16 T 28-03-2018 IPR019289 Bacteriophage tail protein Gp41, putative AM393_RS10835 89dc8876699ba6224e231170054c69ec 107 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 9 102 1.8E-10 T 28-03-2018 IPR008407 Branched-chain amino acid transport, AzlD AM393_RS19715 72c9f4980f9d4f2d20fa55d54bb6fd87 162 Pfam PF10767 Protein of unknown function (DUF2593) 21 160 2.6E-60 T 28-03-2018 IPR019703 Protein of unknown function DUF2593 AM393_RS04305 14df35a0eff0f3993516f533145c1a90 248 Pfam PF03591 AzlC protein 27 168 7.4E-38 T 28-03-2018 IPR011606 Branched-chain amino acid transport, permease AM393_RS03855 9bbf3e7d7fb88f48946a8ec761f8d31f 232 SMART SM01144 27 218 7.8E-70 T 28-03-2018 IPR005636 DTW AM393_RS03855 9bbf3e7d7fb88f48946a8ec761f8d31f 232 Pfam PF03942 DTW domain 30 212 1.0E-39 T 28-03-2018 IPR005636 DTW AM393_RS27250 8d44c63507786cb69ea2f90f654a8290 141 ProDom PD012854 PLASMID KLCA ANTIRESTRICTION YFJX YCIB ARDB STABLE YFEB Z1216 C0275 43 141 3.0E-37 T 28-03-2018 IPR004914 Antirestriction protein AM393_RS27250 8d44c63507786cb69ea2f90f654a8290 141 Pfam PF03230 Antirestriction protein 45 141 2.0E-31 T 28-03-2018 IPR004914 Antirestriction protein AM393_RS01590 3f6343574f5b531b56cee5f94464a18e 352 Pfam PF04632 Fusaric acid resistance protein family 20 332 1.8E-15 T 28-03-2018 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 AM393_RS17085 2222b8f08037a3d1b16b62565819f336 154 Pfam PF03245 Bacteriophage Rz lysis protein 29 153 3.1E-27 T 28-03-2018 IPR004929 Spanin, inner membrane subunit GO:0019076|GO:0019835 AM393_RS03320 b255160276f4dc433625ad3fe767d920 348 Pfam PF06674 Protein of unknown function (DUF1176) 25 348 1.2E-94 T 28-03-2018 IPR009560 Protein of unknown function DUF1176 AM393_RS24420 f012b9c63193ed97bbbcf493ba12e7d9 310 SUPERFAMILY SSF88713 8 308 3.06E-90 T 28-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AM393_RS24420 f012b9c63193ed97bbbcf493ba12e7d9 310 Pfam PF01522 Polysaccharide deacetylase 78 180 6.5E-9 T 28-03-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 AM393_RS24420 f012b9c63193ed97bbbcf493ba12e7d9 310 Gene3D G3DSA:3.20.20.370 4 310 5.8E-63 T 28-03-2018 AM393_RS24420 f012b9c63193ed97bbbcf493ba12e7d9 310 TIGRFAM TIGR03212 uraD_N-term-dom: putative urate catabolism protein 8 308 6.9E-165 T 28-03-2018 IPR017625 PuuE allantoinase/chitin deacetylase 1 AM393_RS24620 e218266875e652cde628ebf9a6610a06 321 Gene3D G3DSA:3.40.50.1820 16 321 3.1E-42 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AM393_RS24620 e218266875e652cde628ebf9a6610a06 321 SUPERFAMILY SSF53474 44 316 1.89E-45 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AM393_RS24620 e218266875e652cde628ebf9a6610a06 321 Pfam PF07859 alpha/beta hydrolase fold 76 295 2.6E-18 T 28-03-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 AM393_RS07230 bd2c8f03899233b613d1fa761e2f57a4 132 Pfam PF07332 Putative Actinobacterial Holin-X, holin superfamily III 19 127 6.0E-19 T 28-03-2018 IPR009937 Putative Actinobacterial Holin-X, holin superfamily III AM393_RS17235 a9ce83039ff2414245d9bcdbfb6c35d1 825 Gene3D G3DSA:3.10.20.30 14 79 4.4E-4 T 28-03-2018 IPR012675 Beta-grasp domain AM393_RS01295 c71ac5fd43b73d437b3cc95c9f10ba46 193 Pfam PF11198 Protein of unknown function (DUF2857) 6 182 2.6E-63 T 28-03-2018 IPR021364 Protein of unknown function DUF2857 AM393_RS22300 c96a9c2e675e6e044bf16b486113e983 514 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 90 510 6.4E-167 T 28-03-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath AM393_RS22300 c96a9c2e675e6e044bf16b486113e983 514 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 55 510 8.5E-201 T 28-03-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath AM393_RS18920 e767b0c42c7b0917fa5004f4d9138b57 70 Pfam PF10798 Biofilm development protein YmgB/AriR 15 64 1.4E-5 T 28-03-2018 IPR024753 Regulatory protein AriR GO:0042710|GO:0071229 AM393_RS20415 e9bca7c9c9033edaaec8909582c86011 75 Pfam PF13993 YccJ-like protein 9 75 2.6E-39 T 28-03-2018 IPR025600 YccJ-like protein AM393_RS18010 5fd479017ad0bdad366819df67fe7237 335 Gene3D G3DSA:1.10.3470.10 5 334 1.6E-63 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AM393_RS18010 5fd479017ad0bdad366819df67fe7237 335 Pfam PF01032 FecCD transport family 19 328 3.7E-90 T 28-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 AM393_RS18010 5fd479017ad0bdad366819df67fe7237 335 SUPERFAMILY SSF81345 7 328 1.44E-76 T 28-03-2018 IPR029022 ABC transporter, BtuC-like AM393_RS18930 d982aace13bfd6ceab275ac154d12666 307 Pfam PF01757 Acyltransferase family 20 294 1.7E-11 T 28-03-2018 IPR002656 Acyltransferase 3 GO:0016747 AM393_RS05730 46cb909126f8bb09a13d77473163578e 90 Pfam PF17090 Uncharacterised protein family 25 88 9.7E-19 T 28-03-2018 IPR031381 Uncharacterised protein YtcA AM393_RS20805 08d44db9d23ba1a5eee81ffd3d055063 124 Pfam PF07233 Protein of unknown function (DUF1425) 33 123 1.8E-25 T 28-03-2018 IPR010824 Protein of unknown function DUF1425 AM393_RS11190 a4c4ff7d036b31794f438746bc460e3d 32 Pfam PF08046 IlvGEDA operon leader peptide 1 32 1.5E-17 T 28-03-2018 IPR012567 IlvGEDA operon leader peptide GO:0009082 AM393_RS06240 cecc664685ec17bd39f15fe0a3f0bec4 91 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 76 2.0E-37 T 28-03-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 AM393_RS06240 cecc664685ec17bd39f15fe0a3f0bec4 91 SUPERFAMILY SSF111148 1 90 1.31E-40 T 28-03-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 AM393_RS06240 cecc664685ec17bd39f15fe0a3f0bec4 91 PIRSF PIRSF029827 1 90 3.8E-44 T 28-03-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 AM393_RS06240 cecc664685ec17bd39f15fe0a3f0bec4 91 Pfam PF04362 Bacterial Fe(2+) trafficking 1 88 1.2E-40 T 28-03-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 AM393_RS06240 cecc664685ec17bd39f15fe0a3f0bec4 91 Gene3D G3DSA:1.10.3880.10 2 89 9.5E-41 T 28-03-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 AM393_RS06240 cecc664685ec17bd39f15fe0a3f0bec4 91 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 88 28.0 T 28-03-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 AM393_RS02950 4009884898d7a2102fbd820a1f6dde98 309 Pfam PF01226 Formate/nitrite transporter 43 279 1.1E-41 T 28-03-2018 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 AM393_RS02950 4009884898d7a2102fbd820a1f6dde98 309 Gene3D G3DSA:1.20.1080.10 34 295 5.7E-51 T 28-03-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 AM393_RS04350 7747d64a897abee2b3e551326ad6afbb 142 Pfam PF09335 SNARE associated Golgi protein 26 131 1.6E-10 T 28-03-2018 IPR032816 SNARE associated Golgi protein AM393_RS04350 7747d64a897abee2b3e551326ad6afbb 142 ProDom PD085709 MEMBRANE RP436 UNCHARACTERIZED INTEGRAL PREDICTED TRANSMEMBRANE 22 111 0.004 T 28-03-2018 IPR020143 Uncharacterised protein family, RP436 AM393_RS11935 a7c62e3103baa952964b02dcb9a08d4a 267 SUPERFAMILY SSF51735 8 265 1.23E-66 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS11935 a7c62e3103baa952964b02dcb9a08d4a 267 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 140 148 1.5E-11 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS11935 a7c62e3103baa952964b02dcb9a08d4a 267 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 160 179 1.5E-11 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS11935 a7c62e3103baa952964b02dcb9a08d4a 267 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 1.5E-11 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS11935 a7c62e3103baa952964b02dcb9a08d4a 267 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 147 175 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM393_RS11935 a7c62e3103baa952964b02dcb9a08d4a 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 150 7.3E-35 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS11935 a7c62e3103baa952964b02dcb9a08d4a 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 7.3E-35 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS11935 a7c62e3103baa952964b02dcb9a08d4a 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 228 248 7.3E-35 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS11935 a7c62e3103baa952964b02dcb9a08d4a 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 7.3E-35 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS11935 a7c62e3103baa952964b02dcb9a08d4a 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 198 7.3E-35 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS11935 a7c62e3103baa952964b02dcb9a08d4a 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 179 7.3E-35 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS11935 a7c62e3103baa952964b02dcb9a08d4a 267 Gene3D G3DSA:3.40.50.720 5 266 2.1E-60 T 28-03-2018 AM393_RS11935 a7c62e3103baa952964b02dcb9a08d4a 267 Pfam PF00106 short chain dehydrogenase 10 204 5.7E-57 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS24675 a1a3a33734c3162ea1f41d36bf000c2a 289 Pfam PF09995 Uncharacterized protein conserved in bacteria (DUF2236) 42 271 1.3E-55 T 28-03-2018 IPR018713 Domain of unknown function DUF2236 AM393_RS04580 fb537a99d7f97cb141c8b73206d25abb 149 Pfam PF11046 Transcriptional repressor of hyc and hyp operons 1 145 4.8E-74 T 28-03-2018 IPR021285 Transcription regulator, HycA AM393_RS13715 2468ad4e87c8f088a1bac5f87044d831 374 Gene3D G3DSA:3.40.1710.10 41 191 5.2E-21 T 28-03-2018 AM393_RS13715 2468ad4e87c8f088a1bac5f87044d831 374 Pfam PF12698 ABC-2 family transporter protein 26 363 1.4E-33 T 28-03-2018 AM393_RS24970 2c6838969a15b0106f02a6c79c0dd57d 193 SUPERFAMILY SSF50475 4 186 6.38E-38 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 AM393_RS24970 2c6838969a15b0106f02a6c79c0dd57d 193 Gene3D G3DSA:2.30.110.10 7 192 4.5E-37 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 AM393_RS24970 2c6838969a15b0106f02a6c79c0dd57d 193 Pfam PF01613 Flavin reductase like domain 19 154 7.5E-14 T 28-03-2018 IPR002563 Flavin reductase like domain GO:0010181 AM393_RS24970 2c6838969a15b0106f02a6c79c0dd57d 193 SMART SM00903 14 158 1.3E-19 T 28-03-2018 IPR002563 Flavin reductase like domain GO:0010181 AM393_RS06800 62d705dfc16d84152759e43f42992469 489 SUPERFAMILY SSF56954 25 441 4.32E-96 T 28-03-2018 AM393_RS06800 62d705dfc16d84152759e43f42992469 489 Pfam PF02321 Outer membrane efflux protein 232 425 2.6E-32 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AM393_RS06800 62d705dfc16d84152759e43f42992469 489 Pfam PF02321 Outer membrane efflux protein 25 209 5.3E-26 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AM393_RS06800 62d705dfc16d84152759e43f42992469 489 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 21 439 1.3E-136 T 28-03-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 AM393_RS06800 62d705dfc16d84152759e43f42992469 489 Gene3D G3DSA:1.20.1600.10 12 435 4.7E-75 T 28-03-2018 AM393_RS20620 8ef5f977a2a239d0ed304abb27660389 128 Pfam PF13984 MsyB protein 7 128 2.0E-61 T 28-03-2018 IPR025729 MsyB protein AM393_RS18715 e97beb2e0a4058952ae28ce21d7cc049 96 Pfam PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) 16 93 9.4E-33 T 28-03-2018 IPR011846 Cyd operon protein YbgE AM393_RS18715 e97beb2e0a4058952ae28ce21d7cc049 96 TIGRFAM TIGR02112 cyd_oper_ybgE: cyd operon protein YbgE 4 96 3.2E-40 T 28-03-2018 IPR011846 Cyd operon protein YbgE AM393_RS06360 7fbd23d81fa4089f75d274e674503563 509 Pfam PF07916 TraG-like protein, N-terminal region 8 481 1.5E-84 T 28-03-2018 IPR012931 TraG-like, N-terminal AM393_RS04130 614f8fa018ea6aa46771ce4d59ffc2d4 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 2.2E-26 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS04130 614f8fa018ea6aa46771ce4d59ffc2d4 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 223 243 2.2E-26 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS04130 614f8fa018ea6aa46771ce4d59ffc2d4 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 2.2E-26 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS04130 614f8fa018ea6aa46771ce4d59ffc2d4 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 2.2E-26 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS04130 614f8fa018ea6aa46771ce4d59ffc2d4 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 2.2E-26 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS04130 614f8fa018ea6aa46771ce4d59ffc2d4 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 2.2E-26 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS04130 614f8fa018ea6aa46771ce4d59ffc2d4 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 4.2E-7 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS04130 614f8fa018ea6aa46771ce4d59ffc2d4 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 4.2E-7 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS04130 614f8fa018ea6aa46771ce4d59ffc2d4 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 4.2E-7 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS04130 614f8fa018ea6aa46771ce4d59ffc2d4 264 Gene3D G3DSA:3.40.50.720 1 260 4.7E-59 T 28-03-2018 AM393_RS04130 614f8fa018ea6aa46771ce4d59ffc2d4 264 Pfam PF00106 short chain dehydrogenase 8 194 1.5E-42 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM393_RS04130 614f8fa018ea6aa46771ce4d59ffc2d4 264 SUPERFAMILY SSF51735 1 259 2.49E-61 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS02090 df79ae1f5435f2519621dc811f0df31f 189 Pfam PF09335 SNARE associated Golgi protein 23 144 2.4E-18 T 28-03-2018 IPR032816 SNARE associated Golgi protein AM393_RS17565 de113fe921f8479bccb772a69e89db2e 499 Pfam PF13520 Amino acid permease 16 430 4.3E-35 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AM393_RS17565 de113fe921f8479bccb772a69e89db2e 499 PIRSF PIRSF006060 1 490 3.4E-71 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AM393_RS14095 bfb2df75319c9a646a8c98bbe05f27d3 258 Pfam PF06738 Putative threonine/serine exporter 13 252 1.3E-67 T 28-03-2018 IPR010619 Putative threonine/serine exporter AM393_RS21875 ca269c681677c76478b6bb67f9947dc4 353 Hamap MF_01085 UPF0283 membrane protein YcjF [ycjF]. 4 347 38.66 T 28-03-2018 IPR006507 Uncharacterised protein family UPF0283 AM393_RS21875 ca269c681677c76478b6bb67f9947dc4 353 Pfam PF05128 Domain of unknown function (DUF697) 184 341 1.2E-53 T 28-03-2018 IPR021147 Protein of unknown function DUF697 AM393_RS21875 ca269c681677c76478b6bb67f9947dc4 353 TIGRFAM TIGR01620 hyp_HI0043: TIGR01620 family protein 54 341 9.9E-144 T 28-03-2018 IPR006507 Uncharacterised protein family UPF0283 AM393_RS21650 2b28b827fe2905534a72b9c6c762b8b8 206 SUPERFAMILY SSF55821 1 204 3.97E-66 T 28-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain AM393_RS21650 2b28b827fe2905534a72b9c6c762b8b8 206 Gene3D G3DSA:3.90.870.10 1 205 1.2E-60 T 28-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain AM393_RS21650 2b28b827fe2905534a72b9c6c762b8b8 206 Pfam PF01300 Telomere recombination 23 198 2.2E-46 T 28-03-2018 IPR006070 YrdC-like domain GO:0003725 AM393_RS21650 2b28b827fe2905534a72b9c6c762b8b8 206 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 7 203 1.1E-77 T 28-03-2018 IPR006070 YrdC-like domain GO:0003725 AM393_RS12220 ea4e0806eb59f3220c185b02c75e4598 93 Pfam PF15940 Family of unknown function 1 90 1.4E-44 T 28-03-2018 IPR016958 Uncharacterised conserved protein UCP030798 AM393_RS12220 ea4e0806eb59f3220c185b02c75e4598 93 PIRSF PIRSF030798 1 93 3.0E-44 T 28-03-2018 IPR016958 Uncharacterised conserved protein UCP030798 AM393_RS12220 ea4e0806eb59f3220c185b02c75e4598 93 ProDom PD064934 YJCB MEMBRANE INNER ECS5042 21 93 9.0E-27 T 28-03-2018 IPR016958 Uncharacterised conserved protein UCP030798 AM393_RS29090 a13a548562ddcb205c82b92722a8f0cd 66 Pfam PF14319 Transposase zinc-binding domain 1 65 1.4E-18 T 28-03-2018 IPR026889 Transposase zinc-binding domain AM393_RS01640 36c67964972064365c5d79eb5735b9b8 274 Pfam PF01370 NAD dependent epimerase/dehydratase family 10 212 4.8E-7 T 28-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 AM393_RS01640 36c67964972064365c5d79eb5735b9b8 274 SUPERFAMILY SSF51735 2 266 6.68E-28 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS01640 36c67964972064365c5d79eb5735b9b8 274 Gene3D G3DSA:3.40.50.720 1 145 2.0E-15 T 28-03-2018 AM393_RS01640 36c67964972064365c5d79eb5735b9b8 274 Gene3D G3DSA:3.90.25.10 170 268 4.8E-10 T 28-03-2018 AM393_RS25700 292f918afd4aed43d989049bce45aa7c 175 Gene3D G3DSA:3.10.450.160 32 175 4.2E-27 T 28-03-2018 AM393_RS24320 81beeaf15bec7e3c06a789e6f1cf661e 61 Pfam PF13318 Protein of unknown function (DUF4089) 10 59 3.5E-18 T 28-03-2018 IPR025148 Protein of unknown function DUF4089 AM393_RS19455 488c4aa49d9e6cb44264c1c4b2a231f5 169 Pfam PF06892 Phage regulatory protein CII (CP76) 4 160 4.1E-68 T 28-03-2018 IPR009679 Bacteriophage 186, CII AM393_RS18535 3bf048d1b58012b3a2afbb685cb6038f 97 Pfam PF01402 Ribbon-helix-helix protein, copG family 52 88 1.4E-9 T 28-03-2018 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 AM393_RS18535 3bf048d1b58012b3a2afbb685cb6038f 97 Gene3D G3DSA:1.10.1220.10 21 96 4.5E-7 T 28-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 AM393_RS18535 3bf048d1b58012b3a2afbb685cb6038f 97 SUPERFAMILY SSF47598 51 84 7.56E-5 T 28-03-2018 IPR010985 Ribbon-helix-helix GO:0006355 AM393_RS13985 862f2e58058a5ee8d610868a9d8fe729 290 Pfam PF05035 2-keto-3-deoxy-galactonokinase 8 284 1.3E-96 T 28-03-2018 IPR007729 2-keto-3-deoxy-galactonokinase GO:0008671|GO:0034194 KEGG: 00052+2.7.1.58|MetaCyc: PWY-7130 AM393_RS09640 8805bb8ad97d4d75acdcdb52ca5ea107 360 Pfam PF04932 O-Antigen ligase 162 294 8.5E-17 T 28-03-2018 IPR007016 O-antigen ligase-related AM393_RS02470 6d26de2a0c3a4dec20fe93b506c85f53 350 Gene3D G3DSA:3.10.520.10 44 338 2.9E-50 T 28-03-2018 AM393_RS02470 6d26de2a0c3a4dec20fe93b506c85f53 350 Pfam PF02424 ApbE family 41 324 1.0E-78 T 28-03-2018 IPR024932 Flavin transferase ApbE GO:0017013 AM393_RS02470 6d26de2a0c3a4dec20fe93b506c85f53 350 SUPERFAMILY SSF143631 35 345 8.37E-95 T 28-03-2018 IPR003374 ApbE-like domain AM393_RS02470 6d26de2a0c3a4dec20fe93b506c85f53 350 PIRSF PIRSF006268 3 346 1.0E-90 T 28-03-2018 IPR024932 Flavin transferase ApbE GO:0017013 AM393_RS27175 cc348f63e64f921ab34a6574462a9b23 242 Pfam PF06952 PsiA protein 1 236 1.6E-125 T 28-03-2018 IPR009713 Uncharacterised protein family PsiA AM393_RS19485 53ade40d6beb2a1adf8f8d7cde90792e 804 Pfam PF05840 Bacteriophage replication gene A protein (GPA) 188 510 7.2E-122 T 28-03-2018 IPR008766 Replication gene A protein GO:0006260 AM393_RS19485 53ade40d6beb2a1adf8f8d7cde90792e 804 ProDom PD092055 ENDONUCLEASE POSSIBLE PROPHAGE FOR ORFE TRANSPOSABLE FELS-2 RETRON STY4635 ELEMENT 658 801 1.0E-71 T 28-03-2018 IPR020220 Retron, EC67, C-terminal GO:0016788 AM393_RS25215 1e665b790f4058b9dcd7623aeb966909 41 Pfam PF10617 Protein of unknown function (DUF2474) 4 40 6.4E-17 T 28-03-2018 IPR018895 Protein of unknown function DUF2474 AM393_RS06665 2c36ef86323eaac91e57915a308fc641 164 Pfam PF03350 Uncharacterized protein family, UPF0114 9 125 6.7E-36 T 28-03-2018 IPR005134 Uncharacterised protein family UPF0114 AM393_RS06665 2c36ef86323eaac91e57915a308fc641 164 TIGRFAM TIGR00645 HI0507: TIGR00645 family protein 1 162 2.4E-77 T 28-03-2018 IPR020761 Uncharacterised protein family UPF0114, bacteria AM393_RS06665 2c36ef86323eaac91e57915a308fc641 164 Hamap MF_00143 UPF0114 protein YqhA [yqhA]. 1 164 92.56 T 28-03-2018 IPR020761 Uncharacterised protein family UPF0114, bacteria AM393_RS11920 a1a076a38551e92544e89cb2bd96ce54 266 Pfam PF03609 PTS system sorbose-specific iic component 6 237 1.5E-72 T 28-03-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 AM393_RS11920 a1a076a38551e92544e89cb2bd96ce54 266 TIGRFAM TIGR00822 EII-Sor: PTS system, mannose/fructose/sorbose family, IIC component 1 266 2.6E-132 T 28-03-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 AM393_RS24735 028b34575a6ac1f66cdfb4b8ffbff3f3 61 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 10 30 3.6E-10 T 28-03-2018 IPR019626 Stress-induced protein, KGG, repeat AM393_RS24735 028b34575a6ac1f66cdfb4b8ffbff3f3 61 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 32 52 3.7E-10 T 28-03-2018 IPR019626 Stress-induced protein, KGG, repeat AM393_RS22500 d748b3acc40b837e93b05e34b42459ad 204 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 18 194 1.1E-32 T 28-03-2018 IPR003740 Uncharacterised membrane protein YitT AM393_RS21820 f6466452b03289ffb2d067a225e13e2a 301 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 217 1.4E-17 T 28-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 AM393_RS21820 f6466452b03289ffb2d067a225e13e2a 301 SUPERFAMILY SSF51735 1 283 7.51E-42 T 28-03-2018 IPR016040 NAD(P)-binding domain AM393_RS21820 f6466452b03289ffb2d067a225e13e2a 301 Gene3D G3DSA:3.40.50.720 1 169 2.8E-19 T 28-03-2018 AM393_RS21820 f6466452b03289ffb2d067a225e13e2a 301 Gene3D G3DSA:3.90.25.10 170 292 2.7E-14 T 28-03-2018 AM393_RS09840 e13751ac2fbec6cca54c6d81b561c30a 434 Pfam PF00939 Sodium:sulfate symporter transmembrane region 16 433 1.6E-22 T 28-03-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 AM393_RS16865 bad89899b49615e895e515f7dc1f36c6 381 Gene3D G3DSA:2.40.160.10 14 381 7.1E-32 T 28-03-2018 AM393_RS16865 bad89899b49615e895e515f7dc1f36c6 381 SUPERFAMILY SSF56935 44 381 2.84E-30 T 28-03-2018 AM393_RS17110 8147bb784466ec7bca455e8465203a24 334 Pfam PF04233 Phage Mu protein F like protein 194 302 6.0E-10 T 28-03-2018 IPR006528 Phage head morphogenesis domain AM393_RS22350 244a17fd1df08054403507a60f98b62f 176 Pfam PF11745 Protein of unknown function (DUF3304) 30 148 2.1E-34 T 28-03-2018 IPR021733 Protein of unknown function DUF3304 AM393_RS07210 f4dd9857e4aff342330bc2adb581ee67 220 Pfam PF09335 SNARE associated Golgi protein 48 174 9.5E-22 T 28-03-2018 IPR032816 SNARE associated Golgi protein AM393_RS13125 4c6b236263cad449401470c58977dcec 214 TIGRFAM TIGR03579 EF_0833: conserved hypothetical protein EF_0833/AHA_3914 5 213 2.2E-118 T 28-03-2018 IPR025456 Protein of unknown function DUF4310 AM393_RS13125 4c6b236263cad449401470c58977dcec 214 Pfam PF14187 Domain of unknown function (DUF4310) 4 211 8.6E-108 T 28-03-2018 IPR025456 Protein of unknown function DUF4310 AM393_RS17705 8c8a52722e40d2995e5759702ef68259 284 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 22 284 2.2E-102 T 28-03-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 AM393_RS26775 e50f44bd15c84b8a6582a777f68ad2ff 418 Pfam PF13379 NMT1-like family 38 289 1.2E-104 T 28-03-2018 AM393_RS26775 e50f44bd15c84b8a6582a777f68ad2ff 418 Gene3D G3DSA:3.40.190.10 40 141 5.2E-9 T 28-03-2018 AM393_RS26775 e50f44bd15c84b8a6582a777f68ad2ff 418 Gene3D G3DSA:3.40.190.10 159 368 4.3E-42 T 28-03-2018 AM393_RS26775 e50f44bd15c84b8a6582a777f68ad2ff 418 SUPERFAMILY SSF53850 42 281 2.48E-34 T 28-03-2018 AM393_RS10875 1f0ba9050953c028c0a70742d4e4a776 334 Gene3D G3DSA:1.10.3470.10 3 333 3.4E-30 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AM393_RS10875 1f0ba9050953c028c0a70742d4e4a776 334 Pfam PF02653 Branched-chain amino acid transport system / permease component 59 318 1.7E-47 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AM393_RS17030 aeeb17e8a7a93eef29bb237de88e8d8f 215 Pfam PF04448 Protein of unknown function (DUF551) 158 212 6.6E-12 T 28-03-2018 IPR007539 Domain of unknown function DUF551 AM393_RS08345 8ef5698c3d95b5d711cb6e93714ca13b 64 Pfam PF04324 BFD-like [2Fe-2S] binding domain 2 51 3.5E-14 T 28-03-2018 IPR007419 BFD-like [2Fe-2S]-binding domain AM393_RS06660 6a4c90bbe1b3f36e833d2ce026858f73 295 Pfam PF01738 Dienelactone hydrolase family 84 293 8.2E-52 T 28-03-2018 IPR002925 Dienelactone hydrolase GO:0016787 AM393_RS06660 6a4c90bbe1b3f36e833d2ce026858f73 295 SUPERFAMILY SSF53474 70 294 1.65E-45 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AM393_RS06660 6a4c90bbe1b3f36e833d2ce026858f73 295 Gene3D G3DSA:3.40.50.1820 68 295 1.5E-34 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold AM393_RS05685 37c3f2176157c883d75542a4441e28a8 170 Gene3D G3DSA:2.60.40.1090 21 170 1.2E-34 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM393_RS05685 37c3f2176157c883d75542a4441e28a8 170 SUPERFAMILY SSF49401 29 170 6.96E-37 T 28-03-2018 IPR008966 Adhesion domain AM393_RS05685 37c3f2176157c883d75542a4441e28a8 170 Pfam PF00419 Fimbrial protein 25 170 7.0E-23 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM393_RS16450 5eb548400ff1436c4cbe1ba6e6ba6d09 192 Pfam PF08139 Prokaryotic membrane lipoprotein lipid attachment site 1 19 6.4E-6 T 28-03-2018 IPR012640 Membrane lipoprotein, lipid attachment site AM393_RS16450 5eb548400ff1436c4cbe1ba6e6ba6d09 192 Pfam PF03923 Uncharacterized lipoprotein 29 188 7.9E-54 T 28-03-2018 IPR005619 Uncharacterised protein family, YajG AM393_RS22390 1a14869b8bb49963be251d6532819c60 377 Pfam PF16989 Type VI secretion, EvfE, EvfF, ImpA, BimE, VC_A0119, VasJ 75 334 1.9E-83 T 28-03-2018 IPR017739 Type VI secretion system-associated, VCA0119 AM393_RS15550 a21702afeb85efede6f13ea482de0383 240 Gene3D G3DSA:3.40.50.150 53 210 1.8E-15 T 28-03-2018 AM393_RS15550 a21702afeb85efede6f13ea482de0383 240 Pfam PF08241 Methyltransferase domain 75 124 1.7E-9 T 28-03-2018 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 AM393_RS15550 a21702afeb85efede6f13ea482de0383 240 SUPERFAMILY SSF53335 54 206 4.69E-17 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM393_RS22605 8d49fe431cfe1919c574c393100baecc 879 Pfam PF11739 Dicarboxylate transport 657 858 5.2E-63 T 28-03-2018 IPR021730 Dicarboxylate transport AM393_RS07625 826ce28c0390aeb0d22b5a23951974e7 211 Pfam PF05494 MlaC protein 33 198 2.1E-54 T 28-03-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC AM393_RS07625 826ce28c0390aeb0d22b5a23951974e7 211 Gene3D G3DSA:3.10.450.50 26 71 1.8E-5 T 28-03-2018 AM393_RS07625 826ce28c0390aeb0d22b5a23951974e7 211 Gene3D G3DSA:3.10.450.50 72 172 4.6E-22 T 28-03-2018 AM393_RS07625 826ce28c0390aeb0d22b5a23951974e7 211 PIRSF PIRSF004649 1 211 2.8E-63 T 28-03-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC AM393_RS12475 0a0903da75fa3c766910ff7c063d68e9 467 ProSitePatterns PS00872 Sodium:galactoside symporter family signature. 55 80 - T 28-03-2018 IPR018043 Sodium:galactoside symporter, conserved site GO:0005215|GO:0006814|GO:0016020 AM393_RS12475 0a0903da75fa3c766910ff7c063d68e9 467 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 4 446 2.2E-172 T 28-03-2018 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 AM393_RS12475 0a0903da75fa3c766910ff7c063d68e9 467 Gene3D G3DSA:1.20.1250.20 215 442 8.6E-9 T 28-03-2018 AM393_RS12475 0a0903da75fa3c766910ff7c063d68e9 467 Gene3D G3DSA:1.20.1250.20 4 209 1.1E-12 T 28-03-2018 AM393_RS12475 0a0903da75fa3c766910ff7c063d68e9 467 SUPERFAMILY SSF103473 6 434 1.83E-28 T 28-03-2018 IPR020846 Major facilitator superfamily domain AM393_RS12475 0a0903da75fa3c766910ff7c063d68e9 467 Pfam PF13347 MFS/sugar transport protein 6 432 1.8E-84 T 28-03-2018 AM393_RS28795 54da752625827e45254c355ff81f9a10 90 Pfam PF03400 IS1 transposase 1 90 4.0E-46 T 28-03-2018 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 AM393_RS02085 b8b4971e7b23b7d34eb39b4a30e7e6e6 195 Pfam PF06930 Protein of unknown function (DUF1282) 7 177 6.2E-44 T 28-03-2018 IPR009698 Protein of unknown function DUF1282 AM393_RS26950 3460d99c910fb98abf65533479a2aba2 212 Pfam PF09673 Type-F conjugative transfer system pilin assembly protein 91 185 3.7E-19 T 28-03-2018 IPR019106 Type-F conjugative transfer system pilin assembly protein TrbC AM393_RS26950 3460d99c910fb98abf65533479a2aba2 212 TIGRFAM TIGR02742 TrbC_Ftype: type-F conjugative transfer system pilin assembly protein TrbC 90 202 2.9E-36 T 28-03-2018 IPR014113 Type-F conjugative transfer system pilin assembly protein TrbC, subgroup AM393_RS05585 9f0a128f1a2a993faabf0a39f0c08529 153 Pfam PF05232 Chlorhexidine efflux transporter 9 71 2.0E-23 T 28-03-2018 IPR007896 Chlorhexidine efflux transporter AM393_RS05585 9f0a128f1a2a993faabf0a39f0c08529 153 Pfam PF05232 Chlorhexidine efflux transporter 77 140 1.7E-20 T 28-03-2018 IPR007896 Chlorhexidine efflux transporter AM393_RS13540 c2fe687d0bdec11c7db6e8f2bd415dff 125 Pfam PF10908 Protein of unknown function (DUF2778) 32 103 3.5E-22 T 28-03-2018 IPR021225 Protein of unknown function DUF2778 AM393_RS13030 9fc95ba2cc5cd5871faad5e432047388 114 SUPERFAMILY SSF110857 1 111 1.05E-33 T 28-03-2018 IPR013024 Gamma-glutamyl cyclotransferase-like AM393_RS13030 9fc95ba2cc5cd5871faad5e432047388 114 Gene3D G3DSA:3.10.490.10 1 112 1.1E-28 T 28-03-2018 AM393_RS13030 9fc95ba2cc5cd5871faad5e432047388 114 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 3 109 6.8E-24 T 28-03-2018 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like AM393_RS23485 9cf819bbc84a88ff7d9d4f801c4ed9bc 72 ProDom PD027692 ANTIBIOTIC RESISTANCE MULTIPLE MARB 22 72 2.0E-10 T 28-03-2018 IPR025732 MarB protein AM393_RS23485 9cf819bbc84a88ff7d9d4f801c4ed9bc 72 Pfam PF13999 MarB protein 6 70 1.7E-35 T 28-03-2018 IPR025732 MarB protein AM393_RS04960 4805f23a01d4196b161c124003fa0c80 181 Pfam PF07348 Syd protein (SUKH-2) 7 179 8.2E-68 T 28-03-2018 IPR009948 Syd GO:0009898 AM393_RS04960 4805f23a01d4196b161c124003fa0c80 181 Hamap MF_01104 Protein Syd [syd]. 3 181 34.419 T 28-03-2018 IPR009948 Syd GO:0009898 AM393_RS24120 41b8e6f484d1b0dcf2f45259cc5e4589 336 Gene3D G3DSA:1.10.3470.10 46 326 2.1E-28 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AM393_RS24120 41b8e6f484d1b0dcf2f45259cc5e4589 336 Pfam PF02653 Branched-chain amino acid transport system / permease component 55 319 3.1E-46 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AM393_RS13025 00b034870516d45777b22e446479cb3a 1258 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 922 1258 1.3E-67 T 28-03-2018 IPR007452 Translocation and assembly module TamB AM393_RS20675 144b0786aa83f812eff439ca8c977a54 186 Pfam PF07273 Protein of unknown function (DUF1439) 27 178 1.0E-53 T 28-03-2018 IPR010835 Protein of unknown function DUF1439 AM393_RS15535 27ef57e0c916c6ee40787cbc6683f11c 256 Gene3D G3DSA:3.40.50.150 25 255 1.0E-46 T 28-03-2018 AM393_RS15535 27ef57e0c916c6ee40787cbc6683f11c 256 SUPERFAMILY SSF53335 11 243 7.21E-50 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM393_RS15535 27ef57e0c916c6ee40787cbc6683f11c 256 Pfam PF08241 Methyltransferase domain 49 145 1.8E-26 T 28-03-2018 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 AM393_RS12860 4bb0455a384f08e82bffe775d4691e09 95 SUPERFAMILY SSF159871 10 94 3.53E-21 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 AM393_RS12860 4bb0455a384f08e82bffe775d4691e09 95 Gene3D G3DSA:3.30.1660.10 36 94 7.5E-20 T 28-03-2018 IPR025543 Dodecin-like AM393_RS12860 4bb0455a384f08e82bffe775d4691e09 95 Pfam PF07338 Protein of unknown function (DUF1471) 39 94 1.3E-19 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 AM393_RS14085 08ddb325d23ccaeec71e65aca229d011 179 Hamap MF_01061 Primosomal protein 1 [dnaT]. 3 179 37.99 T 28-03-2018 IPR020917 Primosomal protein 1 GO:0006260 AM393_RS12310 e2ed79488759863cf3bddcc26e9d3be4 103 Pfam PF04341 Protein of unknown function, DUF485 11 98 1.5E-33 T 28-03-2018 IPR007436 Protein of unknown function DUF485 AM393_RS09780 73b6463c020612dd646b3e7713736b57 205 Pfam PF03458 UPF0126 domain 91 164 4.1E-21 T 28-03-2018 IPR005115 Uncharacterised domain UPF0126 AM393_RS09780 73b6463c020612dd646b3e7713736b57 205 Pfam PF03458 UPF0126 domain 5 78 5.5E-19 T 28-03-2018 IPR005115 Uncharacterised domain UPF0126 AM393_RS26385 89d288a4a355f4536704a28dabfbebe7 326 PIRSF PIRSF034367 1 325 1.4E-184 T 28-03-2018 IPR015004 Protein of unknown function DUF1852 AM393_RS26385 89d288a4a355f4536704a28dabfbebe7 326 Pfam PF08908 Domain of unknown function (DUF1852) 1 321 1.4E-178 T 28-03-2018 IPR015004 Protein of unknown function DUF1852 AM393_RS00045 85e68003973afee5f12a645614b2c5c6 451 Pfam PF06958 S-type Pyocin 142 305 1.9E-47 T 28-03-2018 IPR016128 Pyosin/cloacin translocation domain GO:0009405 AM393_RS28475 e16d2ab64154d464c016d8b90e69b48b 63 SUPERFAMILY SSF81301 7 59 1.59E-10 T 28-03-2018 AM393_RS28475 e16d2ab64154d464c016d8b90e69b48b 63 Gene3D G3DSA:3.30.460.10 1 63 6.6E-10 T 28-03-2018 AM393_RS28475 e16d2ab64154d464c016d8b90e69b48b 63 Pfam PF01909 Nucleotidyltransferase domain 26 56 2.0E-5 T 28-03-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 AM393_RS06790 22f32891e0e410fea434b4a2d3f44725 140 Pfam PF06853 Protein of unknown function (DUF1249) 21 134 4.7E-42 T 28-03-2018 IPR009659 Protein of unknown function DUF1249 AM393_RS22180 81b66edb518ad55dc4dc9a7fe0d0bbc7 381 Pfam PF11863 Protein of unknown function (DUF3383) 7 92 1.3E-23 T 28-03-2018 IPR021808 Protein of unknown function DUF3383 AM393_RS22180 81b66edb518ad55dc4dc9a7fe0d0bbc7 381 Pfam PF11863 Protein of unknown function (DUF3383) 97 379 4.8E-98 T 28-03-2018 IPR021808 Protein of unknown function DUF3383 AM393_RS01345 059f95ba741ec1d796f6893cb865db1c 227 Pfam PF04335 VirB8 protein 10 222 3.7E-54 T 28-03-2018 IPR007430 Bacterial virulence protein VirB8 GO:0016020 AM393_RS01345 059f95ba741ec1d796f6893cb865db1c 227 SUPERFAMILY SSF54427 81 222 1.23E-31 T 28-03-2018 IPR032710 NTF2-like domain AM393_RS01790 504a3f59d84ee412276e0127264f52c2 334 Gene3D G3DSA:3.20.20.80 17 328 2.0E-35 T 28-03-2018 AM393_RS01790 504a3f59d84ee412276e0127264f52c2 334 SUPERFAMILY SSF51445 25 323 4.86E-45 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily AM393_RS13805 02e6403405605ae21e55527f2530dcf7 383 Pfam PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component 40 383 2.4E-79 T 28-03-2018 IPR010327 FldB/FldC dehydratase alpha/beta subunit AM393_RS05995 e2deaa9897cd16cc5b337f0ba3ba8cb2 255 Pfam PF04402 Protein of unknown function (DUF541) 30 231 5.8E-45 T 28-03-2018 IPR007497 Protein of unknown function DUF541 AM393_RS18630 11852ff6f787f9c8c2a639e6cbb4b763 331 Gene3D G3DSA:1.20.1250.20 28 221 9.7E-4 T 28-03-2018 AM393_RS18630 11852ff6f787f9c8c2a639e6cbb4b763 331 Pfam PF06166 Protein of unknown function (DUF979) 7 330 3.0E-127 T 28-03-2018 IPR009323 Protein of unknown function DUF979 AM393_RS01815 aa1851261d4c3edb37dee8a8d5880675 477 Pfam PF14052 Capsule assembly protein Wzi 90 466 1.1E-110 T 28-03-2018 IPR026950 Capsule assembly protein Wzi AM393_RS25780 0fd33ea3b25bedb123ea5615ec3f78af 293 Pfam PF02633 Creatinine amidohydrolase 15 254 1.6E-63 T 28-03-2018 IPR003785 Creatininase/formamide hydrolase KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|KEGG: 00740+3.5.1.102|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-6167 AM393_RS25780 0fd33ea3b25bedb123ea5615ec3f78af 293 Gene3D G3DSA:3.40.50.10310 5 261 5.0E-73 T 28-03-2018 IPR024087 Creatininase-like domain KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|KEGG: 00740+3.5.1.102|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-6167 AM393_RS25780 0fd33ea3b25bedb123ea5615ec3f78af 293 SUPERFAMILY SSF102215 10 258 1.28E-68 T 28-03-2018 IPR024087 Creatininase-like domain KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|KEGG: 00740+3.5.1.102|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-6167 AM393_RS18925 00bceb3d02734ba5d217669da830b371 168 Gene3D G3DSA:2.40.160.20 12 167 6.9E-5 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AM393_RS01745 fd86a953836d986ab9eef08507fe4ee6 477 Pfam PF13440 Polysaccharide biosynthesis protein 28 317 6.9E-80 T 28-03-2018 AM393_RS27910 97537d41548b4891031727b3a71e2c8a 251 Pfam PF01863 Protein of unknown function DUF45 35 241 2.5E-58 T 28-03-2018 IPR002725 Protein of unknown function DUF45 AM393_RS11915 0e720c90cb9af5da352dfd65db4d745e 274 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 5 273 2.4E-103 T 28-03-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 AM393_RS11915 0e720c90cb9af5da352dfd65db4d745e 274 TIGRFAM TIGR00828 EIID-AGA: PTS system, mannose/fructose/sorbose family, IID component 4 273 9.6E-144 T 28-03-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 AM393_RS13825 336f07ad26991628e544eb3ddf8d38ae 220 Pfam PF01810 LysE type translocator 21 205 5.7E-22 T 28-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AM393_RS01630 0ded6b3bc08df44fca6b5622f0a809e7 452 Pfam PF13520 Amino acid permease 55 408 1.6E-33 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AM393_RS01630 0ded6b3bc08df44fca6b5622f0a809e7 452 PIRSF PIRSF006060 2 445 7.7E-71 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AM393_RS22230 a22a748b7eb6141f8dacb259e61deaa6 188 SUPERFAMILY SSF140990 9 116 1.02E-6 T 28-03-2018 AM393_RS25665 32272d989c93076137f2524876fabdb3 127 Gene3D G3DSA:3.10.180.10 1 127 1.0E-22 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM393_RS25665 32272d989c93076137f2524876fabdb3 127 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 125 7.1E-9 T 28-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AM393_RS25665 32272d989c93076137f2524876fabdb3 127 SUPERFAMILY SSF54593 1 127 1.61E-23 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM393_RS23500 f8cb0298d3c07c2e55fe56cb64e18ad1 222 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 12 213 1.8E-36 T 28-03-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 AM393_RS23500 f8cb0298d3c07c2e55fe56cb64e18ad1 222 Pfam PF01914 MarC family integral membrane protein 5 217 9.3E-66 T 28-03-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 AM393_RS17340 86bb44aa160a45fc28f5bb1740488856 288 SUPERFAMILY SSF55729 17 253 6.5E-38 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM393_RS17340 86bb44aa160a45fc28f5bb1740488856 288 Gene3D G3DSA:3.40.630.30 8 138 1.1E-14 T 28-03-2018 AM393_RS17340 86bb44aa160a45fc28f5bb1740488856 288 Pfam PF13527 Acetyltransferase (GNAT) domain 45 129 1.3E-12 T 28-03-2018 AM393_RS23155 b4b639d42524ba0d45fdf9453f9cb5e0 344 Pfam PF01594 AI-2E family transporter 14 328 8.2E-70 T 28-03-2018 IPR002549 Transmembrane protein TqsA-like AM393_RS23455 4102824d41022c195611aac0f35e2f63 357 Gene3D G3DSA:1.10.3470.10 42 355 1.9E-27 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AM393_RS23455 4102824d41022c195611aac0f35e2f63 357 TIGRFAM TIGR03408 urea_trans_UrtC: urea ABC transporter, permease protein UrtC 43 351 5.7E-129 T 28-03-2018 IPR017778 ABC transporter, urea, permease protein, UrtC AM393_RS23455 4102824d41022c195611aac0f35e2f63 357 Pfam PF02653 Branched-chain amino acid transport system / permease component 52 340 1.2E-40 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AM393_RS23585 9f3d267866b1c32914d64fca9d6404c8 122 ProDom PD076485 YNEG CYTOPLASMIC ECS2130 STY1535 7 114 2.0E-48 T 28-03-2018 IPR020378 Protein of unknown function DUF4186 AM393_RS23585 9f3d267866b1c32914d64fca9d6404c8 122 Pfam PF13811 Domain of unknown function (DUF4186) 6 112 2.5E-51 T 28-03-2018 IPR020378 Protein of unknown function DUF4186 AM393_RS28190 e2258c54ee84f211f4c1883fc1f9b149 239 Gene3D G3DSA:1.20.5.50 99 194 9.4E-5 T 28-03-2018 AM393_RS27180 fdd821992fdb9817c6a4b5450500405f 143 Pfam PF06290 Plasmid SOS inhibition protein (PsiB) 5 143 4.6E-77 T 28-03-2018 IPR009385 Plasmid SOS inhibition AM393_RS19520 2b48ba3adc17610ea2714b99136f6b3f 277 Pfam PF05929 Phage capsid scaffolding protein (GPO) serine peptidase 6 277 1.8E-115 T 28-03-2018 IPR009228 Capsid scaffolding protein GpO GO:0019069 AM393_RS15840 5445505a8758cb98958d784f95f8acde 141 Gene3D G3DSA:1.10.720.10 86 126 2.0E-4 T 28-03-2018 AM393_RS11335 a9034351f1c6f1eb0c4fbd437fcc02e5 358 Gene3D G3DSA:3.40.50.2000 176 343 2.7E-5 T 28-03-2018 AM393_RS11335 a9034351f1c6f1eb0c4fbd437fcc02e5 358 Pfam PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 1 354 1.5E-180 T 28-03-2018 IPR009993 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase GO:0008417|GO:0009246|GO:0036065 AM393_RS11335 a9034351f1c6f1eb0c4fbd437fcc02e5 358 Hamap MF_01002 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase [wecF]. 1 358 65.782 T 28-03-2018 IPR009993 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase GO:0008417|GO:0009246|GO:0036065 AM393_RS06500 8db479666f7efc46ca5678012caf10a9 205 TIGRFAM TIGR03759 conj_TIGR03759: integrating conjugative element protein, PFL_4693 family 7 200 6.2E-80 T 28-03-2018 IPR022293 Integrating conjugative element protein, PFL4693 AM393_RS27980 50f921da800b76df1ca576a479de58cd 200 Pfam PF10624 Plasmid conjugative transfer entry exclusion protein TraS 6 88 4.4E-7 T 28-03-2018 IPR018898 Plasmid conjugative transfer entry exclusion protein TraS AM393_RS27215 f225cceced72cf4fab2e0e2df98b00ac 451 Pfam PF12083 Domain of unknown function (DUF3560) 88 206 1.4E-38 T 28-03-2018 IPR021944 Protein of unknown function DUF3560 AM393_RS09055 243ff243fafee079917c18ecb6da1acb 498 Pfam PF01384 Phosphate transporter family 30 487 5.0E-86 T 28-03-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 AM393_RS12275 9ed15a0208ebd5fe2205b114f282f549 229 Pfam PF04172 LrgB-like family 14 224 4.0E-67 T 28-03-2018 IPR007300 CidB/LrgB family AM393_RS12610 281970e6d960c4f60823826fefe95e90 117 Pfam PF13698 Domain of unknown function (DUF4156) 23 115 3.7E-32 T 28-03-2018 IPR025294 Protein of unknown function DUF4156 AM393_RS09530 de745c75da31c9af5e465387b036a08f 198 SUPERFAMILY SSF158668 26 187 6.41E-58 T 28-03-2018 AM393_RS09530 de745c75da31c9af5e465387b036a08f 198 Pfam PF05068 Mannitol repressor 29 187 8.1E-62 T 28-03-2018 IPR007761 Mannitol repressor MtlR-like AM393_RS09530 de745c75da31c9af5e465387b036a08f 198 Gene3D G3DSA:1.20.120.330 27 187 9.3E-58 T 28-03-2018 AM393_RS22245 9a747007cacd3053fbad737ae868bae4 398 Pfam PF04865 Baseplate J-like protein 85 342 2.1E-12 T 28-03-2018 IPR006949 Baseplate protein J-like AM393_RS27565 5e0c08098bda270e90fcc9e2c2308749 410 Gene3D G3DSA:1.10.10.10 1 101 8.0E-7 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS27425 1284d651533c873a6429b3c2036f9a07 146 Pfam PF04214 Protein of unknown function, DUF 53 119 8.2E-24 T 28-03-2018 IPR007332 Protein of unknown function DUF411 AM393_RS21105 539279b9f7e5c51b3a25f5b4c6de9663 87 Pfam PF10749 Protein of unknown function (DUF2534) 5 84 7.4E-40 T 28-03-2018 IPR019685 Protein of unknown function DUF2534 AM393_RS09540 a25b922a304c467f34a2ee679dd8ee07 120 Pfam PF10928 Protein of unknown function (DUF2810) 66 117 6.1E-34 T 28-03-2018 IPR021230 Protein of unknown function DUF2810 AM393_RS10105 4b543cf38bf8fec89e8f93657c76fc25 440 Pfam PF02378 Phosphotransferase system, EIIC 33 351 1.6E-51 T 28-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AM393_RS10105 4b543cf38bf8fec89e8f93657c76fc25 440 PIRSF PIRSF006351 5 434 8.8E-135 T 28-03-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 AM393_RS10105 4b543cf38bf8fec89e8f93657c76fc25 440 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 16 426 2.9E-111 T 28-03-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 AM393_RS00085 8297ab3f88d3b0ba445d0bc4be553555 446 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 5 444 2.4E-124 T 28-03-2018 IPR010263 Type VI secretion protein, VC_A0114 AM393_RS00085 8297ab3f88d3b0ba445d0bc4be553555 446 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 18 443 9.9E-134 T 28-03-2018 IPR010263 Type VI secretion protein, VC_A0114 AM393_RS13515 2a846bb354c505d9daf0c42c41483389 107 Gene3D G3DSA:3.30.870.10 1 105 9.4E-7 T 28-03-2018 AM393_RS13515 2a846bb354c505d9daf0c42c41483389 107 SUPERFAMILY SSF56024 1 100 4.13E-6 T 28-03-2018 AM393_RS01410 e30eb1a07ed2e9450e98dc8591aaf635 319 Pfam PF16162 Domain of unknown function (DUF4868) 117 304 7.6E-32 T 28-03-2018 IPR032359 Protein of unknown function DUF4868 AM393_RS07395 82c3dfa5b5a657223ebd6218966f893f 346 Pfam PF03773 Predicted permease 61 151 9.8E-13 T 28-03-2018 IPR005524 Predicted permease DUF318 AM393_RS07395 82c3dfa5b5a657223ebd6218966f893f 346 Pfam PF03773 Predicted permease 74 342 1.2E-25 T 28-03-2018 IPR005524 Predicted permease DUF318 AM393_RS14770 6cb02f1268392cd0ba3f5517c4539d00 28 Pfam PF08054 Leucine operon leader peptide 1 27 4.2E-8 T 28-03-2018 IPR012570 Leucine operon leader peptide GO:0009098 AM393_RS10300 90414c66dafd748ee73dc2edc1c043e7 110 Pfam PF07119 Protein of unknown function (DUF1375) 15 76 3.6E-11 T 28-03-2018 IPR010780 Protein of unknown function DUF1375 AM393_RS23255 2d5d68ba47afd5ed8e360b07f943d013 186 SUPERFAMILY SSF55729 6 164 2.7E-40 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM393_RS23255 2d5d68ba47afd5ed8e360b07f943d013 186 Gene3D G3DSA:3.40.630.30 5 174 6.4E-33 T 28-03-2018 AM393_RS23255 2d5d68ba47afd5ed8e360b07f943d013 186 Pfam PF13302 Acetyltransferase (GNAT) domain 7 140 5.0E-21 T 28-03-2018 IPR000182 GNAT domain GO:0008080 AM393_RS27050 ebafe1f56710810fd59d0a1144aa5a6c 231 Gene3D G3DSA:1.10.10.10 119 212 6.9E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS27050 ebafe1f56710810fd59d0a1144aa5a6c 231 SUPERFAMILY SSF46894 144 208 1.19E-8 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM393_RS27655 af39785a84a901ec60061ae83fc5750b 587 Pfam PF03235 Protein of unknown function DUF262 9 165 1.9E-17 T 28-03-2018 IPR004919 Domain of unknown function DUF262 AM393_RS05390 f9da832271e97a2d776b817293cc6280 135 Pfam PF10713 Protein of unknown function (DUF2509) 15 132 8.5E-32 T 28-03-2018 IPR019652 Protein of unknown function DUF2509 AM393_RS17055 9cf2dbbf750d012293e8451a56083911 45 ProDom PD026569 PROPHAGE GIFSY-1 3'REGION ORF45 C1558 RUSA LAMBDOID YLCG DLP12 5 36 0.002 T 28-03-2018 AM393_RS17025 37892a670f7b1c938dfe6427b7873980 280 Pfam PF13935 Ead/Ea22-like protein 4 158 2.4E-15 T 28-03-2018 IPR025153 Ead/Ea22-like protein AM393_RS17025 37892a670f7b1c938dfe6427b7873980 280 Pfam PF13935 Ead/Ea22-like protein 139 237 2.0E-7 T 28-03-2018 IPR025153 Ead/Ea22-like protein AM393_RS17025 37892a670f7b1c938dfe6427b7873980 280 Gene3D G3DSA:1.20.1170.10 1 274 2.1E-4 T 28-03-2018 AM393_RS17710 ed81c9f9299aaea6615fe24416ed1dfc 247 Pfam PF03609 PTS system sorbose-specific iic component 3 235 3.9E-72 T 28-03-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 AM393_RS25585 c82f9a61381ede16d915fe80b4d7fd11 135 Hamap MF_00546 Acid shock protein [asr]. 1 135 17.801 T 28-03-2018 IPR023497 Acid shock protein AM393_RS21015 5c5b24e31454f0f724064e2797318dfd 61 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 10 30 3.6E-10 T 28-03-2018 IPR019626 Stress-induced protein, KGG, repeat AM393_RS21015 5c5b24e31454f0f724064e2797318dfd 61 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 32 52 4.3E-10 T 28-03-2018 IPR019626 Stress-induced protein, KGG, repeat AM393_RS21050 82816ed32b419809907c114b37fe586d 210 Pfam PF14090 Helix-turn-helix domain 143 210 2.3E-6 T 28-03-2018 AM393_RS09420 110b4146095ae3c799e4b5229deaf464 147 Pfam PF05360 yiaA/B two helix domain 75 127 3.1E-19 T 28-03-2018 IPR008024 YiaAB two helix AM393_RS09420 110b4146095ae3c799e4b5229deaf464 147 Pfam PF05360 yiaA/B two helix domain 12 64 3.1E-21 T 28-03-2018 IPR008024 YiaAB two helix AM393_RS17095 138aa3f041065afd021fece77819a42c 200 Gene3D G3DSA:1.10.10.10 4 147 9.0E-4 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM393_RS26750 b54c3c90f3f4c660dcc0e6ad2df8ae99 460 Pfam PF11924 Inverse autotransporter, beta-domain 59 335 4.5E-100 T 28-03-2018 IPR024519 Inverse autotransporter, beta-domain AM393_RS06555 be408aeab56f7938a2fa8b2d25305175 194 Pfam PF11198 Protein of unknown function (DUF2857) 14 185 1.8E-63 T 28-03-2018 IPR021364 Protein of unknown function DUF2857 AM393_RS06555 be408aeab56f7938a2fa8b2d25305175 194 Gene3D G3DSA:1.10.1660.10 29 84 0.27 T 28-03-2018 AM393_RS20730 16b7b4782095c75c76453aa2061ce783 173 Pfam PF02620 Uncharacterized ACR, COG1399 62 171 1.1E-19 T 28-03-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD AM393_RS21135 74569fdcbe987bf24baf2bb0ab0955f3 118 Pfam PF04343 Protein of unknown function, DUF488 4 111 9.8E-32 T 28-03-2018 IPR007438 Protein of unknown function DUF488 AM393_RS00235 8a56e22ae5dffb9debb9ba88d120b620 309 Pfam PF04168 A predicted alpha-helical domain with a conserved ER motif. 1 306 4.1E-79 T 28-03-2018 IPR007296 Domain of unknown function DUF403 AM393_RS06550 33d5b7af774105d9e406fc7802d2b95d 405 Gene3D G3DSA:1.25.10.10 202 365 0.12 T 28-03-2018 IPR011989 Armadillo-like helical AM393_RS06550 33d5b7af774105d9e406fc7802d2b95d 405 Gene3D G3DSA:1.25.10.10 54 198 0.1 T 28-03-2018 IPR011989 Armadillo-like helical AM393_RS06550 33d5b7af774105d9e406fc7802d2b95d 405 Pfam PF13730 Helix-turn-helix domain 53 114 1.1E-11 T 28-03-2018 AM393_RS22960 dbf29574934001edbcf0c3da9d8490e6 62 Pfam PF15930 Domain of unknown function 1 62 3.4E-43 T 28-03-2018 IPR031830 Uncharacterised protein YdiH AM393_RS19960 9e120e04af7aa24189d7e947482bbb8d 586 Pfam PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding 59 391 1.2E-81 T 28-03-2018 IPR003776 YcaO-like domain AM393_RS19960 9e120e04af7aa24189d7e947482bbb8d 586 TIGRFAM TIGR00702 TIGR00702: YcaO-type kinase domain 11 404 1.9E-165 T 28-03-2018 IPR003776 YcaO-like domain AM393_RS26115 da8b18aa55d4a0e7906576e162b291cb 341 SUPERFAMILY SSF81345 9 338 2.88E-75 T 28-03-2018 IPR029022 ABC transporter, BtuC-like AM393_RS26115 da8b18aa55d4a0e7906576e162b291cb 341 Gene3D G3DSA:1.10.3470.10 10 339 9.2E-60 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AM393_RS26115 da8b18aa55d4a0e7906576e162b291cb 341 Pfam PF01032 FecCD transport family 25 338 1.2E-83 T 28-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 AM393_RS05590 e3fd86c63c40a6b51a393f1b25309fe1 409 Gene3D G3DSA:1.20.1070.10 176 388 2.3E-4 T 28-03-2018 AM393_RS17495 07ec1cfddda15f6839883ffbcb6925ee 129 Gene3D G3DSA:1.10.287.700 65 129 3.9E-7 T 28-03-2018 AM393_RS27355 2caa888b8b852ba808fa4aec5d31775f 425 Pfam PF10011 Predicted membrane protein (DUF2254) 14 370 3.1E-92 T 28-03-2018 IPR018723 Protein of unknown function DUF2254, membrane AM393_RS02865 8296310e88cda45522a828828930c6c2 325 PIRSF PIRSF020588 2 325 1.7E-143 T 28-03-2018 IPR023597 Flagellar regulator Flk GO:0010468|GO:0031224 AM393_RS03715 1127073d11803c577c5f96c3d00c3317 235 Pfam PF13942 YfhG lipoprotein 53 221 3.5E-76 T 28-03-2018 IPR025262 Quorum-sensing regulator protein G AM393_RS03715 1127073d11803c577c5f96c3d00c3317 235 ProDom PD117379 LIPOPROTEIN YFHG HELIX ALPHA REGULATOR MEMBRANE TRANSCRIPTIONAL FAMILIIY EBP TWO-COMPONENT 29 223 9.0E-56 T 28-03-2018 AM393_RS08565 aa994b90cc793dbd1daec27b1dd8c08c 127 Pfam PF10748 Protein of unknown function (DUF2531) 4 112 4.5E-36 T 28-03-2018 IPR019684 HofP protein AM393_RS17215 6c7ee74e05feae18ca9019eff9ffcb24 1148 TIGRFAM TIGR02675 tape_meas_nterm: tape measure domain 152 226 2.0E-23 T 28-03-2018 IPR013491 Caudovirus, tape measure, N-terminal AM393_RS17215 6c7ee74e05feae18ca9019eff9ffcb24 1148 Pfam PF06120 Tail length tape measure protein 426 692 5.6E-21 T 28-03-2018 IPR009302 Tail length tape measure AM393_RS14075 050c337f6ef4057243897209998e2d07 163 Pfam PF10696 Protein of unknown function (DUF2501) 82 161 1.4E-24 T 28-03-2018 IPR019637 Protein of unknown function DUF2501 AM393_RS08925 76031cd223eb3d48e08c71e89b16056d 91 Pfam PF06611 Protein of unknown function (DUF1145) 1 57 7.1E-27 T 28-03-2018 IPR009525 Protein of unknown function DUF1145 AM393_RS15145 e8413da005a6c258e2c9f28ad916633c 248 Pfam PF01203 Type II secretion system (T2SS), protein N 34 236 1.9E-41 T 28-03-2018 IPR022792 Type II secretion system, protein N AM393_RS10210 3c150d39a46d7bbb925e0463ea4b08b5 31 Pfam PF08049 IlvB leader peptide 1 31 1.9E-16 T 28-03-2018 IPR012566 IlvB leader peptide AM393_RS17645 3c821c6264e094c6c9b58f859ced0016 192 Pfam PF16449 Fimbrillin MatB 24 190 1.7E-65 T 28-03-2018 IPR016514 Fimbrial protein MatB AM393_RS09140 c256ccaffbca620a29e098bbc599a777 683 Pfam PF05170 AsmA family 1 579 6.4E-152 T 28-03-2018 IPR007844 AsmA AM393_RS28700 d6889ba83c76b595bd4b0c637b8bd112 76 Pfam PF09584 Phage shock protein PspD (Phageshock_PspD) 11 71 1.2E-31 T 28-03-2018 IPR014321 Phage shock protein, PspD AM393_RS28700 d6889ba83c76b595bd4b0c637b8bd112 76 TIGRFAM TIGR02979 phageshock_pspD: phage shock protein PspD 13 71 4.0E-34 T 28-03-2018 IPR014321 Phage shock protein, PspD AM393_RS06920 e76515384912a97163b2fd9958ce7b5d 535 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 36 438 4.3E-9 T 28-03-2018 IPR001248 Purine-cytosine permease GO:0005215|GO:0016020|GO:0055085 AM393_RS26555 4052e04c2a59399ac2e4b8b9ab957156 94 Pfam PF11080 Endoribonuclease GhoS 2 92 1.9E-37 T 28-03-2018 IPR022597 Endoribonuclease GhoS GO:0004521 AM393_RS26555 4052e04c2a59399ac2e4b8b9ab957156 94 ProDom PD066031 YDIZ CYTOPLASMIC STY1786 2 92 2.0E-22 T 28-03-2018 IPR020499 Uncharacterised protein family YdiZ AM393_RS28150 3d811fb99eaf950148552d9caf8ebcbb 272 Pfam PF16932 Type IV secretory system, conjugal DNA-protein transfer 47 258 3.9E-77 T 28-03-2018 IPR031618 Putative type IV secretory system protein AM393_RS26905 1e0f5bbd3b5ddcd5e7e18ff66f4fa088 178 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 20 167 5.1E-37 T 28-03-2018 IPR017734 Type VI secretion system, lipoprotein SciN AM393_RS26905 1e0f5bbd3b5ddcd5e7e18ff66f4fa088 178 TIGRFAM TIGR03352 VI_chp_3: type VI secretion lipoprotein, VC_A0113 family 12 154 5.0E-27 T 28-03-2018 IPR017734 Type VI secretion system, lipoprotein SciN AM393_RS13480 3feff80c53438471c29a3c7703089f0d 245 ProDom PD037484 CAPSID DETERMINATION SIZE HEAD GLYCOPROTEIN SID MORPHOGENESIS CP-933I ENCODED LATE 1 244 1.0E-68 T 28-03-2018 AM393_RS25330 01d13920f6f51daa7e15e59c6e30fb56 91 Pfam PF02583 Metal-sensitive transcriptional repressor 7 86 2.7E-19 T 28-03-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 AM393_RS26320 38c8ca6eb4e84091cae114b2a28043be 131 Pfam PF07681 DoxX 11 93 4.8E-7 T 28-03-2018 IPR032808 DoxX family AM393_RS08970 e0d200608ec751716d3f67fa97d9d202 126 SUPERFAMILY SSF103481 47 122 7.32E-11 T 28-03-2018 AM393_RS08970 e0d200608ec751716d3f67fa97d9d202 126 Hamap MF_00538 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF [arnF]. 1 125 21.563 T 28-03-2018 IPR022832 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF AM393_RS17050 6beae3dc9987a54cbbff9afa71be23c6 211 Pfam PF05766 Bacteriophage Lambda NinG protein 1 207 2.2E-58 T 28-03-2018 IPR008713 Bacteriophage lambda NinG AM393_RS00475 d2058830667db44d52a622d559630d81 79 Pfam PF13996 YobH-like protein 2 71 3.3E-37 T 28-03-2018 IPR025611 YobH-like protein AM393_RS26415 63f5f1b7e8409b6df9bd74a079e52b54 370 Pfam PF01594 AI-2E family transporter 15 344 1.1E-57 T 28-03-2018 IPR002549 Transmembrane protein TqsA-like AM393_RS02040 d96908417e464c9e7ba3e4a03945abdc 37 Hamap MF_01362 UPF0387 membrane protein YohO [yohO]. 1 35 15.13 T 28-03-2018 IPR020870 Uncharacterised protein family UPF0387, membrane GO:0005886 AM393_RS12720 596e9e89146b0cb7c85a0e7003eec878 500 Pfam PF13520 Amino acid permease 9 466 7.2E-31 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AM393_RS12720 596e9e89146b0cb7c85a0e7003eec878 500 PIRSF PIRSF006060 1 498 2.2E-58 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AM393_RS10260 2e165adf4533bda2fe2e9feb2811bdcc 115 Pfam PF02656 Domain of unknown function (DUF202) 13 79 7.5E-16 T 28-03-2018 IPR003807 Domain of unknown function DUF202 AM393_RS08675 4a9b0d60c088fff34bbb9b249eede9a6 438 PIRSF PIRSF002746 1 438 4.0E-160 T 28-03-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 AM393_RS08675 4a9b0d60c088fff34bbb9b249eede9a6 438 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 1 438 6.6E-200 T 28-03-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 AM393_RS08675 4a9b0d60c088fff34bbb9b249eede9a6 438 Pfam PF02447 GntP family permease 1 437 4.8E-185 T 28-03-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 AM393_RS17075 5e973425bcf4cdc10130d0bf95d392a1 82 Pfam PF16080 Bacteriophage holin family HP1 5 65 6.6E-7 T 28-03-2018 IPR032118 Bacteriophage holin HP1 family AM393_RS12255 97c7303d2915bc47a40192f5d7f263c0 449 Pfam PF00860 Permease family 26 409 1.5E-87 T 28-03-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 AM393_RS13595 b20bb701bd74b1c2f433ccb3882dd2bc 161 Pfam PF11086 Protein of unknown function (DUF2878) 8 152 2.1E-26 T 28-03-2018 IPR021306 Protein of unknown function DUF2878 AM393_RS03355 52c56e20f6d1ad6db7c84a2741aeef62 68 Pfam PF13980 Uncharacterised protein family (UPF0370) 1 62 4.6E-31 T 28-03-2018 IPR020910 Uncharacterised protein family UPF0370 AM393_RS02025 5a74e2ac212a2b00e28328b92b5e0016 156 Pfam PF07308 Protein of unknown function (DUF1456) 86 149 9.4E-21 T 28-03-2018 IPR009921 Domain of unknown function DUF1456 AM393_RS02025 5a74e2ac212a2b00e28328b92b5e0016 156 Pfam PF07308 Protein of unknown function (DUF1456) 4 70 1.5E-22 T 28-03-2018 IPR009921 Domain of unknown function DUF1456 AM393_RS25260 de4aca3355487e8b6bd3641ec328b2c4 222 Pfam PF11769 Protein of unknown function (DUF3313) 17 212 1.7E-56 T 28-03-2018 IPR021747 Protein of unknown function DUF3313 AM393_RS11405 cb673382fdbeb4d0ae2a9370eb847b77 67 Pfam PF13627 Prokaryotic lipoprotein-attachment site 7 29 1.2E-9 T 28-03-2018 IPR032831 Prokaryotic lipoprotein-attachment site AM393_RS12040 d79e61222fa05304ddc277a5e71bf56f 307 Pfam PF07148 Maltose operon periplasmic protein precursor (MalM) 77 209 2.1E-48 T 28-03-2018 IPR010794 Maltose operon periplasmic GO:0008643|GO:0042597 AM393_RS12830 60c74094523f13fbb377dbeec03096df 65 Pfam PF09838 Uncharacterized protein conserved in bacteria (DUF2065) 5 60 5.2E-22 T 28-03-2018 IPR019201 Protein of unknown function DUF2065 AM393_RS00465 1ada92009dc7a63a6c75b829c14d5f67 96 Pfam PF13974 YebO-like protein 17 96 1.4E-33 T 28-03-2018 IPR025594 YebO-like protein AM393_RS27985 d8f834f3e1fcce67b73bcadd412d0325 940 Pfam PF07916 TraG-like protein, N-terminal region 3 447 3.8E-119 T 28-03-2018 IPR012931 TraG-like, N-terminal AM393_RS27755 c8bc370f6b3711e9af88e15b54823bfb 285 TIGRFAM TIGR03474 incFII_RepA: incFII family plasmid replication initiator RepA 9 283 6.8E-177 T 28-03-2018 IPR017837 Plasmid replication initiator, RepA, IncFII type AM393_RS27755 c8bc370f6b3711e9af88e15b54823bfb 285 Pfam PF02387 IncFII RepA protein family 11 262 3.9E-33 T 28-03-2018 IPR003446 Plasmid replication initiation, RepA GO:0006276 AM393_RS00290 76b256aa3dbb1ed8e6016426d6546b6e 510 Pfam PF04293 SpoVR like protein 19 450 5.1E-177 T 28-03-2018 IPR007390 Sporulation stage V, protein R AM393_RS19690 411f4b3df5ac0fe1ce0d2a8fff49d49c 159 Pfam PF10722 Putative bacterial sensory transduction regulator 9 131 4.0E-16 T 28-03-2018 IPR019660 Putative sensory transduction regulator YbjN AM393_RS13810 f1abb606afcb1ea19ec63a36054d216e 79 Pfam PF09932 Uncharacterized conserved protein (DUF2164) 4 73 6.0E-23 T 28-03-2018 IPR018680 Protein of unknown function DUF2164 AM393_RS16110 30c326f612dbf65f858ddcd2e0f2c835 105 Pfam PF07769 psiF repeat 26 59 3.8E-18 T 28-03-2018 IPR011690 Phosphate-starvation-induced PsiF repeat AM393_RS16110 30c326f612dbf65f858ddcd2e0f2c835 105 Pfam PF07769 psiF repeat 71 103 2.2E-17 T 28-03-2018 IPR011690 Phosphate-starvation-induced PsiF repeat AM393_RS28310 ebaeb0426e4d93cc058fde5062aed20a 286 Pfam PF13708 Domain of unknown function (DUF4942) 93 279 4.8E-48 T 28-03-2018 IPR031339 Domain of unknown function DUF4942 AM393_RS27070 44905f3880a050e5db2a8c3b4d60a2c7 273 Pfam PF06067 Domain of unknown function (DUF932) 36 262 3.5E-56 T 28-03-2018 IPR026325 Protein of unknown function DUF932 AM393_RS22735 7479066335176b8b2951d495c841eedc 224 Gene3D G3DSA:3.40.50.150 4 224 2.0E-41 T 28-03-2018 AM393_RS22735 7479066335176b8b2951d495c841eedc 224 SUPERFAMILY SSF53335 8 220 3.38E-42 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM393_RS22735 7479066335176b8b2951d495c841eedc 224 Pfam PF01596 O-methyltransferase 35 206 8.6E-41 T 28-03-2018 IPR002935 O-methyltransferase, family 3 GO:0008171 AM393_RS13235 41bf9311553f481146d80d648f9a5199 34 Pfam PF08052 PyrBI operon leader peptide 1 34 4.1E-15 T 28-03-2018 IPR012602 PyrBI operon leader peptide GO:0019856 AM393_RS07120 431ded2ba201585410fc4a39e8ab2170 332 Pfam PF02653 Branched-chain amino acid transport system / permease component 35 305 3.0E-44 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AM393_RS07120 431ded2ba201585410fc4a39e8ab2170 332 Gene3D G3DSA:1.10.3470.10 10 310 2.3E-25 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AM393_RS11245 2b2ea0dc65ae45ce73eb3ccfaf09d90c 240 Pfam PF04474 Protein of unknown function (DUF554) 3 232 7.4E-63 T 28-03-2018 IPR007563 Protein of unknown function DUF554 AM393_RS29045 4d853062891fea46fa15511c244b0da1 70 Pfam PF11809 Domain of unknown function (DUF3330) 1 70 6.1E-34 T 28-03-2018 IPR021767 Protein of unknown function DUF3330 AM393_RS21420 c4331615d85ecaa107e5c12ddf521376 218 Pfam PF09335 SNARE associated Golgi protein 50 166 1.2E-25 T 28-03-2018 IPR032816 SNARE associated Golgi protein AM393_RS25815 ac151bb86904dca693c0ec2c06c53047 302 Pfam PF04393 Protein of unknown function (DUF535) 65 285 4.1E-44 T 28-03-2018 IPR007488 Protein of unknown function DUF535 AM393_RS21690 18ec5959ba3083cbace474b60b2a204f 83 Pfam PF10692 Protein of unknown function (DUF2498) 5 81 9.5E-43 T 28-03-2018 IPR019633 Protein of unknown function DUF2498 AM393_RS19565 4687f190ad4d1f397920d2b53d5709ea 143 Pfam PF06891 P2 phage tail completion protein R (GpR) 2 123 2.9E-43 T 28-03-2018 IPR009678 Bacteriophage tail completion protein R AM393_RS04745 94703ec1842e86b6e95533d585cdfe7c 115 Pfam PF07377 Protein of unknown function (DUF1493) 6 115 2.3E-37 T 28-03-2018 IPR010862 Protein of unknown function DUF1493 AM393_RS16800 c537ea2ab9e6e5e67e2766c9e07a4e15 264 Pfam PF01963 TraB family 34 263 1.9E-35 T 28-03-2018 IPR002816 Pheromone shutdown, TraB AM393_RS25150 c213726c69443d0d185880e3815e97f5 57 Pfam PF10753 Toxin GhoT_OrtT 4 57 6.0E-25 T 28-03-2018 IPR019689 Toxin GhoT/OrtT AM393_RS00950 c1992b258f3a21c61cacaffdf20b98f8 303 PIRSF PIRSF016660 1 302 8.2E-125 T 28-03-2018 IPR008526 Inner membrane protein YedI AM393_RS00950 c1992b258f3a21c61cacaffdf20b98f8 303 Pfam PF05661 Protein of unknown function (DUF808) 4 290 1.7E-114 T 28-03-2018 IPR008526 Inner membrane protein YedI AM393_RS28400 cb19c3b89574762a064ba645b6496c8a 161 Pfam PF13737 Transposase DDE domain 34 145 9.6E-45 T 28-03-2018 IPR025668 Transposase DDE domain AM393_RS06290 ef7864ed0c39fc569f559fd272b0daff 201 Pfam PF11284 Protein of unknown function (DUF3085) 22 108 4.6E-19 T 28-03-2018 IPR021436 Protein of unknown function DUF3085 AM393_RS13795 87302e8a72f3635f089333805c217e63 84 Pfam PF11823 Protein of unknown function (DUF3343) 5 51 1.3E-10 T 28-03-2018 IPR021778 Domain of unknown function DUF3343 AM393_RS12485 5e5d3ecf22ae73ff83c7d87295cb1f86 123 Pfam PF10784 Plasmid stability protein 6 75 1.4E-15 T 28-03-2018 IPR019720 Plasmid stability protein, StbB AM393_RS25505 f84c19672e2c74152c30da0726eac7d4 79 Pfam PF06945 Protein of unknown function (DUF1289) 12 57 4.8E-20 T 28-03-2018 IPR010710 Protein of unknown function DUF1289 AM393_RS22385 919fc51c3cc9d8557d842bdcf0ad4188 135 Pfam PF06812 ImpA, N-terminal, type VI secretion system 33 127 1.2E-21 T 28-03-2018 IPR010657 ImpA, N-terminal AM393_RS28425 ce9f249d3e5a0b7e9d4532fe17548603 59 Gene3D G3DSA:1.10.1220.10 1 44 1.4E-4 T 28-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 AM393_RS12615 9db458665500c741f40d885acf24e888 287 Pfam PF15922 YjeJ-like 1 283 5.1E-127 T 28-03-2018 IPR031810 YjeJ-like AM393_RS16125 c06cadac7aa8edbcadef45f1c8c96bbf 236 Pfam PF09849 Uncharacterized protein conserved in bacteria (DUF2076) 1 233 1.9E-70 T 28-03-2018 IPR018648 Protein of unknown function DUF2076 AM393_RS16725 e0a5b59b3dce85a2d4be6d5be6f91724 57 Pfam PF10689 Protein of unknown function (DUF2496) 2 44 1.2E-24 T 28-03-2018 IPR019630 Protein of unknown function DUF2496, YbaM-related AM393_RS23425 ab3ae4cba5ea639ee1b7e84cbf8ddb9d 71 Pfam PF13783 Domain of unknown function (DUF4177) 6 70 2.8E-9 T 28-03-2018 IPR025234 Protein of unknown function DUF4177 AM393_RS28630 99033600f9afe0372f7c7c2951e36f40 120 Pfam PF06953 Arsenical resistance operon trans-acting repressor ArsD 1 120 3.7E-48 T 28-03-2018 IPR010712 Arsenical-resistance operon trans-acting repressor ArsD GO:0003677|GO:0045892|GO:0046685 AM393_RS01365 8b223038cebd84df5f97f7e7a0a24ddb 132 Pfam PF13117 Cag pathogenicity island protein Cag12 10 115 5.4E-40 T 28-03-2018 IPR025264 Cag pathogenicity island protein Cag12