locus-tag class description JYA99_RS00005 PF00308 Bacterial dnaA protein JYA99_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix JYA99_RS00005 PF11638 DnaA N-terminal domain JYA99_RS00010 PF02767 DNA polymerase III beta subunit, central domain JYA99_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain JYA99_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain JYA99_RS00015 PF02463 RecF/RecN/SMC N terminal domain JYA99_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYA99_RS00020 PF18053 DNA gyrase B subunit insert domain JYA99_RS00020 PF01751 Toprim domain JYA99_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus JYA99_RS00020 PF00204 DNA gyrase B JYA99_RS00040 PF00392 Bacterial regulatory proteins, gntR family JYA99_RS00040 PF07729 FCD domain JYA99_RS00045 PF05035 2-keto-3-deoxy-galactonokinase JYA99_RS00050 PF01081 KDPG and KHG aldolase JYA99_RS00055 PF13378 Enolase C-terminal domain-like JYA99_RS00055 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JYA99_RS00060 PF07690 Major Facilitator Superfamily JYA99_RS00065 PF12566 Protein of unknown function (DUF3748) JYA99_RS00065 PF07676 WD40-like Beta Propeller Repeat JYA99_RS00070 PF07119 Protein of unknown function (DUF1375) JYA99_RS00075 PF00011 Hsp20/alpha crystallin family JYA99_RS00080 PF00011 Hsp20/alpha crystallin family JYA99_RS00090 PF02080 TrkA-C domain JYA99_RS00090 PF06826 Predicted Permease Membrane Region JYA99_RS00095 PF07702 UTRA domain JYA99_RS00095 PF00392 Bacterial regulatory proteins, gntR family JYA99_RS00100 PF02378 Phosphotransferase system, EIIC JYA99_RS00100 PF00367 phosphotransferase system, EIIB JYA99_RS00105 PF11975 Family 4 glycosyl hydrolase C-terminal domain JYA99_RS00105 PF02056 Family 4 glycosyl hydrolase JYA99_RS00110 PF02656 Domain of unknown function (DUF202) JYA99_RS00115 PF02656 Domain of unknown function (DUF202) JYA99_RS00125 PF00291 Pyridoxal-phosphate dependent enzyme JYA99_RS00130 PF02447 GntP family permease JYA99_RS00140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYA99_RS00140 PF03466 LysR substrate binding domain JYA99_RS00145 PF07690 Major Facilitator Superfamily JYA99_RS00175 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JYA99_RS00175 PF00205 Thiamine pyrophosphate enzyme, central domain JYA99_RS00175 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JYA99_RS00180 PF01842 ACT domain JYA99_RS00185 PF00196 Bacterial regulatory proteins, luxR family JYA99_RS00185 PF00072 Response regulator receiver domain JYA99_RS00190 PF05231 MASE1 JYA99_RS00190 PF07730 Histidine kinase JYA99_RS00190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYA99_RS00195 PF07690 Major Facilitator Superfamily JYA99_RS00200 PF07690 Major Facilitator Superfamily JYA99_RS00205 PF06711 Protein of unknown function (DUF1198) JYA99_RS00220 PF07690 Major Facilitator Superfamily JYA99_RS00230 PF00266 Aminotransferase class-V JYA99_RS00235 PF07702 UTRA domain JYA99_RS00235 PF00392 Bacterial regulatory proteins, gntR family JYA99_RS00240 PF01547 Bacterial extracellular solute-binding protein JYA99_RS00245 PF08402 TOBE domain JYA99_RS00245 PF00005 ABC transporter JYA99_RS00250 PF00528 Binding-protein-dependent transport system inner membrane component JYA99_RS00255 PF00528 Binding-protein-dependent transport system inner membrane component JYA99_RS00260 PF02264 LamB porin JYA99_RS00265 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit JYA99_RS00270 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JYA99_RS00270 PF02378 Phosphotransferase system, EIIC JYA99_RS00275 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JYA99_RS00280 PF00356 Bacterial regulatory proteins, lacI family JYA99_RS00285 PF07690 Major Facilitator Superfamily JYA99_RS00290 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit JYA99_RS00290 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase JYA99_RS00295 PF03466 LysR substrate binding domain JYA99_RS00295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYA99_RS00300 PF02585 GlcNAc-PI de-N-acetylase JYA99_RS00305 PF03737 Aldolase/RraA JYA99_RS00310 PF04303 PrpF protein JYA99_RS00325 PF00892 EamA-like transporter family JYA99_RS00330 PF00367 phosphotransferase system, EIIB JYA99_RS00330 PF02378 Phosphotransferase system, EIIC JYA99_RS00335 PF13580 SIS domain JYA99_RS00340 PF07690 Major Facilitator Superfamily JYA99_RS00345 PF02321 Outer membrane efflux protein JYA99_RS00350 PF00873 AcrB/AcrD/AcrF family JYA99_RS00355 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JYA99_RS00355 PF00529 HlyD membrane-fusion protein of T1SS JYA99_RS00370 PF00583 Acetyltransferase (GNAT) family JYA99_RS00375 PF00440 Bacterial regulatory proteins, tetR family JYA99_RS00380 PF07690 Major Facilitator Superfamily JYA99_RS00385 PF03466 LysR substrate binding domain JYA99_RS00385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYA99_RS00410 PF03180 NLPA lipoprotein JYA99_RS00420 PF00293 NUDIX domain JYA99_RS00425 PF12706 Beta-lactamase superfamily domain JYA99_RS00430 PF01965 DJ-1/PfpI family JYA99_RS00435 PF08240 Alcohol dehydrogenase GroES-like domain JYA99_RS00435 PF00107 Zinc-binding dehydrogenase JYA99_RS00450 PF00107 Zinc-binding dehydrogenase JYA99_RS00450 PF08240 Alcohol dehydrogenase GroES-like domain JYA99_RS00470 PF13802 Galactose mutarotase-like JYA99_RS00470 PF01055 Glycosyl hydrolases family 31 JYA99_RS00480 PF02056 Family 4 glycosyl hydrolase JYA99_RS00480 PF11975 Family 4 glycosyl hydrolase C-terminal domain JYA99_RS00485 PF02378 Phosphotransferase system, EIIC JYA99_RS00485 PF00367 phosphotransferase system, EIIB JYA99_RS00490 PF05170 AsmA family JYA99_RS00495 PF00860 Permease family JYA99_RS00500 PF03616 Sodium/glutamate symporter JYA99_RS00505 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JYA99_RS00505 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JYA99_RS00510 PF00230 Major intrinsic protein JYA99_RS00515 PF06005 Cell division protein ZapB JYA99_RS00525 PF02611 CDP-diacylglycerol pyrophosphatase JYA99_RS00535 PF00121 Triosephosphate isomerase JYA99_RS00540 PF07305 Protein of unknown function (DUF1454) JYA99_RS00545 PF05656 Protein of unknown function (DUF805) JYA99_RS00550 PF00970 Oxidoreductase FAD-binding domain JYA99_RS00550 PF00175 Oxidoreductase NAD-binding domain JYA99_RS00555 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded JYA99_RS00560 PF17191 RecG wedge domain JYA99_RS00560 PF00271 Helicase conserved C-terminal domain JYA99_RS00560 PF00270 DEAD/DEAH box helicase JYA99_RS00565 PF00588 SpoU rRNA Methylase family JYA99_RS00565 PF12105 SpoU, rRNA methylase, C-terminal JYA99_RS00570 PF04607 Region found in RelA / SpoT proteins JYA99_RS00570 PF02824 TGS domain JYA99_RS00570 PF13291 ACT domain JYA99_RS00575 PF01192 RNA polymerase Rpb6 JYA99_RS00580 PF00625 Guanylate kinase JYA99_RS00585 PF03120 NAD-dependent DNA ligase OB-fold domain JYA99_RS00585 PF01653 NAD-dependent DNA ligase adenylation domain JYA99_RS00590 PF03458 UPF0126 domain JYA99_RS00600 PF02805 Metal binding domain of Ada JYA99_RS00600 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain JYA99_RS00600 PF12833 Helix-turn-helix domain JYA99_RS00600 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain JYA99_RS00610 PF08340 Domain of unknown function (DUF1732) JYA99_RS00610 PF03755 YicC-like family, N-terminal region JYA99_RS00630 PF00005 ABC transporter JYA99_RS00640 PF03725 3' exoribonuclease family, domain 2 JYA99_RS00640 PF01138 3' exoribonuclease family, domain 1 JYA99_RS00645 PF00156 Phosphoribosyl transferase domain JYA99_RS00655 PF00440 Bacterial regulatory proteins, tetR family JYA99_RS00660 PF00692 dUTPase JYA99_RS00665 PF04127 DNA / pantothenate metabolism flavoprotein JYA99_RS00665 PF02441 Flavoprotein JYA99_RS00670 PF04002 RadC-like JAB domain JYA99_RS00675 PF00830 Ribosomal L28 family JYA99_RS00680 PF00471 Ribosomal protein L33 JYA99_RS00685 PF06827 Zinc finger found in FPG and IleRS JYA99_RS00685 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain JYA99_RS00685 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain JYA99_RS00690 PF01467 Cytidylyltransferase-like JYA99_RS00695 PF00535 Glycosyl transferase family 2 JYA99_RS00700 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) JYA99_RS00705 PF00535 Glycosyl transferase family 2 JYA99_RS00710 PF13439 Glycosyltransferase Family 4 JYA99_RS00710 PF00534 Glycosyl transferases group 1 JYA99_RS00715 PF00534 Glycosyl transferases group 1 JYA99_RS00715 PF13439 Glycosyltransferase Family 4 JYA99_RS00720 PF01075 Glycosyltransferase family 9 (heptosyltransferase) JYA99_RS00735 PF04932 O-Antigen ligase JYA99_RS00745 PF01075 Glycosyltransferase family 9 (heptosyltransferase) JYA99_RS00750 PF01075 Glycosyltransferase family 9 (heptosyltransferase) JYA99_RS00755 PF01370 NAD dependent epimerase/dehydratase family JYA99_RS00760 PF00155 Aminotransferase class I and II JYA99_RS00765 PF08240 Alcohol dehydrogenase GroES-like domain JYA99_RS00765 PF00107 Zinc-binding dehydrogenase JYA99_RS00770 PF00535 Glycosyl transferase family 2 JYA99_RS00775 PF04748 Divergent polysaccharide deacetylase JYA99_RS00780 PF01551 Peptidase family M23 JYA99_RS00785 PF01676 Metalloenzyme superfamily JYA99_RS00785 PF06415 BPG-independent PGAM N-terminus (iPGM_N) JYA99_RS00790 PF00581 Rhodanese-like domain JYA99_RS00795 PF00462 Glutaredoxin JYA99_RS00800 PF02556 Preprotein translocase subunit SecB JYA99_RS00805 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus JYA99_RS00805 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus JYA99_RS00810 PF06426 Serine acetyltransferase, N-terminal JYA99_RS00810 PF00132 Bacterial transferase hexapeptide (six repeats) JYA99_RS00815 PF00588 SpoU rRNA Methylase family JYA99_RS00820 PF01070 FMN-dependent dehydrogenase JYA99_RS00825 PF07729 FCD domain JYA99_RS00825 PF00392 Bacterial regulatory proteins, gntR family JYA99_RS00830 PF02652 L-lactate permease JYA99_RS00835 PF10928 Protein of unknown function (DUF2810) JYA99_RS00845 PF05068 Mannitol repressor JYA99_RS00850 PF08125 Mannitol dehydrogenase C-terminal domain JYA99_RS00850 PF01232 Mannitol dehydrogenase Rossmann domain JYA99_RS00855 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JYA99_RS00855 PF02378 Phosphotransferase system, EIIC JYA99_RS00855 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JYA99_RS00860 PF13417 Glutathione S-transferase, N-terminal domain JYA99_RS00860 PF00043 Glutathione S-transferase, C-terminal domain JYA99_RS00865 PF12390 Selenocysteine synthase N terminal JYA99_RS00865 PF03841 L-seryl-tRNA selenium transferase JYA99_RS00870 PF00009 Elongation factor Tu GTP binding domain JYA99_RS00870 PF09107 Elongation factor SelB, winged helix JYA99_RS00870 PF09106 Elongation factor SelB, winged helix JYA99_RS00870 PF03144 Elongation factor Tu domain 2 JYA99_RS00875 PF01614 Bacterial transcriptional regulator JYA99_RS00875 PF09339 IclR helix-turn-helix domain JYA99_RS00880 PF12800 4Fe-4S binding domain JYA99_RS00880 PF13247 4Fe-4S dicluster domain JYA99_RS00885 PF00155 Aminotransferase class I and II JYA99_RS00890 PF00128 Alpha amylase, catalytic domain JYA99_RS00895 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase JYA99_RS00900 PF12833 Helix-turn-helix domain JYA99_RS00905 PF02653 Branched-chain amino acid transport system / permease component JYA99_RS00910 PF00005 ABC transporter JYA99_RS00915 PF13407 Periplasmic binding protein domain JYA99_RS00925 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JYA99_RS00925 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JYA99_RS00930 PF05360 yiaA/B two helix domain JYA99_RS00935 PF05360 yiaA/B two helix domain JYA99_RS00940 PF01757 Acyltransferase family JYA99_RS00945 PF13983 YsaB-like lipoprotein JYA99_RS00950 PF02091 Glycyl-tRNA synthetase alpha subunit JYA99_RS00955 PF02092 Glycyl-tRNA synthetase beta subunit JYA99_RS00955 PF05746 DALR anticodon binding domain JYA99_RS00980 PF01848 Hok/gef family JYA99_RS00985 PF12848 ABC transporter JYA99_RS00985 PF00005 ABC transporter JYA99_RS00990 PF00313 'Cold-shock' DNA-binding domain JYA99_RS00995 PF01381 Helix-turn-helix JYA99_RS01000 PF07690 Major Facilitator Superfamily JYA99_RS01005 PF11254 Protein of unknown function (DUF3053) JYA99_RS01010 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JYA99_RS01010 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JYA99_RS01015 PF07690 Major Facilitator Superfamily JYA99_RS01020 PF00294 pfkB family carbohydrate kinase JYA99_RS01030 PF00356 Bacterial regulatory proteins, lacI family JYA99_RS01035 PF00691 OmpA family JYA99_RS01035 PF13488 Glycine zipper JYA99_RS01040 PF00384 Molybdopterin oxidoreductase JYA99_RS01040 PF18364 Molybdopterin oxidoreductase N-terminal domain JYA99_RS01040 PF01568 Molydopterin dinucleotide binding domain JYA99_RS01045 PF00583 Acetyltransferase (GNAT) family JYA99_RS01050 PF03352 Methyladenine glycosylase JYA99_RS01055 PF03797 Autotransporter beta-domain JYA99_RS01060 PF07690 Major Facilitator Superfamily JYA99_RS01065 PF08019 Phosphoethanolamine transferase EptA/EptB JYA99_RS01065 PF00884 Sulfatase JYA99_RS01090 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JYA99_RS01095 PF00528 Binding-protein-dependent transport system inner membrane component JYA99_RS01100 PF00528 Binding-protein-dependent transport system inner membrane component JYA99_RS01100 PF12911 N-terminal TM domain of oligopeptide transport permease C JYA99_RS01105 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JYA99_RS01105 PF00005 ABC transporter JYA99_RS01110 PF00005 ABC transporter JYA99_RS01110 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JYA99_RS01125 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain JYA99_RS01130 PF03552 Cellulose synthase JYA99_RS01130 PF07238 PilZ domain JYA99_RS01130 PF00535 Glycosyl transferase family 2 JYA99_RS01130 PF03170 Bacterial cellulose synthase subunit JYA99_RS01135 PF03170 Bacterial cellulose synthase subunit JYA99_RS01140 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) JYA99_RS01150 PF01270 Glycosyl hydrolases family 8 JYA99_RS01155 PF11658 Cellulose biosynthesis protein BcsG JYA99_RS01160 PF11120 Cellulose biosynthesis protein BcsF JYA99_RS01165 PF10995 Cellulose biosynthesis GIL JYA99_RS01170 PF10945 Cellulose biosynthesis protein BcsR JYA99_RS01175 PF06564 Cellulose biosynthesis protein BcsQ JYA99_RS01180 PF00535 Glycosyl transferase family 2 JYA99_RS01180 PF07238 PilZ domain JYA99_RS01185 PF03170 Bacterial cellulose synthase subunit JYA99_RS01190 PF01270 Glycosyl hydrolases family 8 JYA99_RS01195 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) JYA99_RS01200 PF00672 HAMP domain JYA99_RS01200 PF17154 Gammaproteobacterial periplasmic sensor domain JYA99_RS01200 PF00563 EAL domain JYA99_RS01200 PF00990 Diguanylate cyclase, GGDEF domain JYA99_RS01205 PF00375 Sodium:dicarboxylate symporter family JYA99_RS01210 PF00675 Insulinase (Peptidase family M16) JYA99_RS01210 PF05193 Peptidase M16 inactive domain JYA99_RS01215 PF00294 pfkB family carbohydrate kinase JYA99_RS01220 PF05170 AsmA family JYA99_RS01225 PF00083 Sugar (and other) transporter JYA99_RS01225 PF07690 Major Facilitator Superfamily JYA99_RS01230 PF03631 Virulence factor BrkB JYA99_RS01235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYA99_RS01235 PF03466 LysR substrate binding domain JYA99_RS01245 PF13302 Acetyltransferase (GNAT) domain JYA99_RS01250 PF01204 Trehalase JYA99_RS01255 PF00465 Iron-containing alcohol dehydrogenase JYA99_RS01265 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JYA99_RS01265 PF07992 Pyridine nucleotide-disulphide oxidoreductase JYA99_RS01270 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ JYA99_RS01275 PF01569 PAP2 superfamily JYA99_RS01280 PF01432 Peptidase family M3 JYA99_RS01285 PF04445 Putative SAM-dependent methyltransferase JYA99_RS01290 PF00854 POT family JYA99_RS01295 PF00582 Universal stress protein family JYA99_RS01300 PF10625 Universal stress protein B (UspB) JYA99_RS01305 PF01384 Phosphate transporter family JYA99_RS01315 PF03448 MgtE intracellular N domain JYA99_RS01315 PF00571 CBS domain JYA99_RS01315 PF01769 Divalent cation transporter JYA99_RS01320 PF08753 NikR C terminal nickel binding domain JYA99_RS01320 PF01402 Ribbon-helix-helix protein, copG family JYA99_RS01325 PF00005 ABC transporter JYA99_RS01330 PF00005 ABC transporter JYA99_RS01335 PF00528 Binding-protein-dependent transport system inner membrane component JYA99_RS01340 PF00528 Binding-protein-dependent transport system inner membrane component JYA99_RS01345 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JYA99_RS01350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYA99_RS01350 PF03466 LysR substrate binding domain JYA99_RS01355 PF05870 Phenolic acid decarboxylase (PAD) JYA99_RS01360 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family JYA99_RS01365 PF00535 Glycosyl transferase family 2 JYA99_RS01370 PF00551 Formyl transferase JYA99_RS01370 PF02911 Formyl transferase, C-terminal domain JYA99_RS01370 PF01370 NAD dependent epimerase/dehydratase family JYA99_RS01375 PF01522 Polysaccharide deacetylase JYA99_RS01380 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase JYA99_RS01385 PF00892 EamA-like transporter family JYA99_RS01395 PF01594 AI-2E family transporter JYA99_RS01400 PF07690 Major Facilitator Superfamily JYA99_RS01405 PF08786 DcrB JYA99_RS01410 PF02592 Putative vitamin uptake transporter JYA99_RS01415 PF01206 Sulfurtransferase TusA JYA99_RS01420 PF00403 Heavy-metal-associated domain JYA99_RS01425 PF07947 YhhN family JYA99_RS01430 PF10694 Protein of unknown function (DUF2500) JYA99_RS01435 PF06611 Protein of unknown function (DUF1145) JYA99_RS01445 PF02881 SRP54-type protein, helical bundle domain JYA99_RS01445 PF00448 SRP54-type protein, GTPase domain JYA99_RS01450 PF00005 ABC transporter JYA99_RS01455 PF02687 FtsX-like permease family JYA99_RS01455 PF18075 FtsX extracellular domain JYA99_RS01460 PF04545 Sigma-70, region 4 JYA99_RS01460 PF04542 Sigma-70 region 2 JYA99_RS01465 PF00155 Aminotransferase class I and II JYA99_RS01465 PF00392 Bacterial regulatory proteins, gntR family JYA99_RS01470 PF00202 Aminotransferase class-III JYA99_RS01480 PF13458 Periplasmic binding protein JYA99_RS01485 PF12568 Acetyltransferase (GNAT) domain, PanZ JYA99_RS01490 PF13458 Periplasmic binding protein JYA99_RS01495 PF02653 Branched-chain amino acid transport system / permease component JYA99_RS01500 PF02653 Branched-chain amino acid transport system / permease component JYA99_RS01500 PF11862 Domain of unknown function (DUF3382) JYA99_RS01505 PF12399 Branched-chain amino acid ATP-binding cassette transporter JYA99_RS01505 PF00005 ABC transporter JYA99_RS01510 PF00005 ABC transporter JYA99_RS01515 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system JYA99_RS01525 PF13416 Bacterial extracellular solute-binding protein JYA99_RS01530 PF00528 Binding-protein-dependent transport system inner membrane component JYA99_RS01535 PF00528 Binding-protein-dependent transport system inner membrane component JYA99_RS01540 PF17912 MalK OB fold domain JYA99_RS01540 PF00005 ABC transporter JYA99_RS01545 PF03009 Glycerophosphoryl diester phosphodiesterase family JYA99_RS01550 PF10956 Protein of unknown function (DUF2756) JYA99_RS01560 PF00583 Acetyltransferase (GNAT) family JYA99_RS01570 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JYA99_RS01570 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JYA99_RS01575 PF02678 Pirin JYA99_RS01575 PF17954 Quercetinase C-terminal cupin domain JYA99_RS01580 PF00356 Bacterial regulatory proteins, lacI family JYA99_RS01580 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JYA99_RS01585 PF01202 Shikimate kinase JYA99_RS01590 PF02447 GntP family permease JYA99_RS01600 PF01118 Semialdehyde dehydrogenase, NAD binding domain JYA99_RS01600 PF02774 Semialdehyde dehydrogenase, dimerisation domain JYA99_RS01605 PF02806 Alpha amylase, C-terminal all-beta domain JYA99_RS01605 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JYA99_RS01605 PF00128 Alpha amylase, catalytic domain JYA99_RS01610 PF00128 Alpha amylase, catalytic domain JYA99_RS01610 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JYA99_RS01610 PF18390 Glycogen debranching enzyme C-terminal domain JYA99_RS01615 PF00483 Nucleotidyl transferase JYA99_RS01620 PF00534 Glycosyl transferases group 1 JYA99_RS01620 PF08323 Starch synthase catalytic domain JYA99_RS01625 PF00343 Carbohydrate phosphorylase JYA99_RS01640 PF01266 FAD dependent oxidoreductase JYA99_RS01640 PF16901 C-terminal domain of alpha-glycerophosphate oxidase JYA99_RS01645 PF00581 Rhodanese-like domain JYA99_RS01650 PF01694 Rhomboid family JYA99_RS01650 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease JYA99_RS01655 PF08220 DeoR-like helix-turn-helix domain JYA99_RS01655 PF00455 DeoR C terminal sensor domain JYA99_RS01660 PF17874 MalT-like TPR region JYA99_RS01660 PF00196 Bacterial regulatory proteins, luxR family JYA99_RS01665 PF00343 Carbohydrate phosphorylase JYA99_RS01670 PF02446 4-alpha-glucanotransferase JYA99_RS01675 PF02447 GntP family permease JYA99_RS01680 PF01106 NifU-like domain JYA99_RS01680 PF01521 Iron-sulphur cluster biosynthesis JYA99_RS01685 PF00156 Phosphoribosyl transferase domain JYA99_RS01690 PF00561 alpha/beta hydrolase fold JYA99_RS01700 PF09012 FeoC like transcriptional regulator JYA99_RS01705 PF07670 Nucleoside recognition JYA99_RS01705 PF07664 Ferrous iron transport protein B C terminus JYA99_RS01705 PF17910 FeoB cytosolic helical domain JYA99_RS01705 PF02421 Ferrous iron transport protein B JYA99_RS01710 PF04023 FeoA domain JYA99_RS01715 PF00575 S1 RNA binding domain JYA99_RS01715 PF09371 Tex-like protein N-terminal domain JYA99_RS01715 PF16921 Tex protein YqgF-like domain JYA99_RS01715 PF17674 HHH domain JYA99_RS01720 PF03449 Transcription elongation factor, N-terminal JYA99_RS01720 PF01272 Transcription elongation factor, GreA/GreB, C-term JYA99_RS01725 PF00486 Transcriptional regulatory protein, C terminal JYA99_RS01725 PF00072 Response regulator receiver domain JYA99_RS01730 PF00512 His Kinase A (phospho-acceptor) domain JYA99_RS01730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYA99_RS01730 PF00672 HAMP domain JYA99_RS01735 PF01293 Phosphoenolpyruvate carboxykinase JYA99_RS01740 PF01430 Hsp33 protein JYA99_RS01745 PF01479 S4 domain JYA99_RS01750 PF13419 Haloacid dehalogenase-like hydrolase JYA99_RS01755 PF07095 Intracellular growth attenuator protein IgaA JYA99_RS01760 PF00293 NUDIX domain JYA99_RS01765 PF00912 Transglycosylase JYA99_RS01765 PF00905 Penicillin binding protein transpeptidase domain JYA99_RS01765 PF17092 Penicillin-binding protein OB-like domain JYA99_RS01790 PF03958 Bacterial type II/III secretion system short domain JYA99_RS01790 PF00263 Bacterial type II and III secretion system protein JYA99_RS01795 PF01202 Shikimate kinase JYA99_RS01800 PF01761 3-dehydroquinate synthase JYA99_RS01805 PF05036 Sporulation related domain JYA99_RS01810 PF02086 D12 class N6 adenine-specific DNA methyltransferase JYA99_RS01815 PF00834 Ribulose-phosphate 3 epimerase family JYA99_RS01820 PF13419 Haloacid dehalogenase-like hydrolase JYA99_RS01825 PF00579 tRNA synthetases class I (W and Y) JYA99_RS01830 PF14824 Sirohaem biosynthesis protein central JYA99_RS01830 PF10414 Sirohaem synthase dimerisation region JYA99_RS01830 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JYA99_RS01835 PF13806 Rieske-like [2Fe-2S] domain JYA99_RS01840 PF07992 Pyridine nucleotide-disulphide oxidoreductase JYA99_RS01840 PF04324 BFD-like [2Fe-2S] binding domain JYA99_RS01840 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JYA99_RS01840 PF18267 Rubredoxin NAD+ reductase C-terminal domain JYA99_RS01840 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JYA99_RS01845 PF07969 Amidohydrolase family JYA99_RS01850 PF07690 Major Facilitator Superfamily JYA99_RS01855 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD JYA99_RS01860 PF10832 Protein of unknown function (DUF2559) JYA99_RS01865 PF02661 Fic/DOC family JYA99_RS01870 PF00117 Glutamine amidotransferase class-I JYA99_RS01875 PF00202 Aminotransferase class-III JYA99_RS01880 PF12805 FUSC-like inner membrane protein yccS JYA99_RS01885 PF00027 Cyclic nucleotide-binding domain JYA99_RS01885 PF13545 Crp-like helix-turn-helix domain JYA99_RS01890 PF02566 OsmC-like protein JYA99_RS01895 PF00485 Phosphoribulokinase / Uridine kinase family JYA99_RS01900 PF06794 Uncharacterised protein family (UPF0270) JYA99_RS01905 PF00561 alpha/beta hydrolase fold JYA99_RS01910 PF00005 ABC transporter JYA99_RS01910 PF12848 ABC transporter JYA99_RS01915 PF02525 Flavodoxin-like fold JYA99_RS01920 PF00999 Sodium/hydrogen exchanger family JYA99_RS01920 PF02254 TrkA-N domain JYA99_RS01925 PF09526 Probable metal-binding protein (DUF2387) JYA99_RS01930 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JYA99_RS01935 PF04102 SlyX JYA99_RS01940 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JYA99_RS01940 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase JYA99_RS01945 PF13309 HTH domain JYA99_RS01945 PF08348 YheO-like PAS domain JYA99_RS01950 PF02635 DsrE/DsrF-like family JYA99_RS01955 PF02635 DsrE/DsrF-like family JYA99_RS01960 PF04077 DsrH like protein JYA99_RS01965 PF00164 Ribosomal protein S12/S23 JYA99_RS01970 PF00177 Ribosomal protein S7p/S5e JYA99_RS01975 PF14492 Elongation Factor G, domain II JYA99_RS01975 PF03764 Elongation factor G, domain IV JYA99_RS01975 PF00009 Elongation factor Tu GTP binding domain JYA99_RS01975 PF03144 Elongation factor Tu domain 2 JYA99_RS01975 PF00679 Elongation factor G C-terminus JYA99_RS01980 PF00009 Elongation factor Tu GTP binding domain JYA99_RS01980 PF03143 Elongation factor Tu C-terminal domain JYA99_RS01980 PF03144 Elongation factor Tu domain 2 JYA99_RS01985 PF04324 BFD-like [2Fe-2S] binding domain JYA99_RS01990 PF00210 Ferritin-like domain JYA99_RS01995 PF01478 Type IV leader peptidase family JYA99_RS02000 PF00338 Ribosomal protein S10p/S20e JYA99_RS02005 PF00297 Ribosomal protein L3 JYA99_RS02010 PF00573 Ribosomal protein L4/L1 family JYA99_RS02015 PF00276 Ribosomal protein L23 JYA99_RS02020 PF00181 Ribosomal Proteins L2, RNA binding domain JYA99_RS02020 PF03947 Ribosomal Proteins L2, C-terminal domain JYA99_RS02025 PF00203 Ribosomal protein S19 JYA99_RS02030 PF00237 Ribosomal protein L22p/L17e JYA99_RS02035 PF00189 Ribosomal protein S3, C-terminal domain JYA99_RS02035 PF07650 KH domain JYA99_RS02040 PF00252 Ribosomal protein L16p/L10e JYA99_RS02045 PF00831 Ribosomal L29 protein JYA99_RS02050 PF00366 Ribosomal protein S17 JYA99_RS02055 PF00238 Ribosomal protein L14p/L23e JYA99_RS02060 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 JYA99_RS02060 PF00467 KOW motif JYA99_RS02065 PF00281 Ribosomal protein L5 JYA99_RS02065 PF00673 ribosomal L5P family C-terminus JYA99_RS02070 PF00253 Ribosomal protein S14p/S29e JYA99_RS02075 PF00410 Ribosomal protein S8 JYA99_RS02080 PF00347 Ribosomal protein L6 JYA99_RS02085 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast JYA99_RS02090 PF00333 Ribosomal protein S5, N-terminal domain JYA99_RS02090 PF03719 Ribosomal protein S5, C-terminal domain JYA99_RS02095 PF00327 Ribosomal protein L30p/L7e JYA99_RS02100 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A JYA99_RS02105 PF00344 SecY translocase JYA99_RS02110 PF00444 Ribosomal protein L36 JYA99_RS02115 PF00416 Ribosomal protein S13/S18 JYA99_RS02120 PF00411 Ribosomal protein S11 JYA99_RS02125 PF01479 S4 domain JYA99_RS02125 PF00163 Ribosomal protein S4/S9 N-terminal domain JYA99_RS02130 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain JYA99_RS02130 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain JYA99_RS02130 PF01000 RNA polymerase Rpb3/RpoA insert domain JYA99_RS02135 PF01196 Ribosomal protein L17 JYA99_RS02140 PF09350 Domain of unknown function (DUF1992) JYA99_RS02145 PF13411 MerR HTH family regulatory protein JYA99_RS02150 PF03889 Alternative ribosome-rescue factor A JYA99_RS02155 PF01741 Large-conductance mechanosensitive channel, MscL JYA99_RS02160 PF02080 TrkA-C domain JYA99_RS02160 PF02254 TrkA-N domain JYA99_RS02165 PF01029 NusB family JYA99_RS02165 PF01189 16S rRNA methyltransferase RsmB/F JYA99_RS02170 PF02911 Formyl transferase, C-terminal domain JYA99_RS02170 PF00551 Formyl transferase JYA99_RS02175 PF01327 Polypeptide deformylase JYA99_RS02180 PF02481 DNA recombination-mediator protein A JYA99_RS02180 PF17782 DprA winged helix domain JYA99_RS02185 PF04361 Protein of unknown function (DUF494) JYA99_RS02190 PF01396 Topoisomerase DNA binding C4 zinc finger JYA99_RS02195 PF01300 Telomere recombination JYA99_RS02200 PF18317 Shikimate 5'-dehydrogenase C-terminal domain JYA99_RS02200 PF01488 Shikimate / quinate 5-dehydrogenase JYA99_RS02200 PF08501 Shikimate dehydrogenase substrate binding domain JYA99_RS02205 PF07369 Protein of unknown function (DUF1488) JYA99_RS02210 PF00132 Bacterial transferase hexapeptide (six repeats) JYA99_RS02250 PF00873 AcrB/AcrD/AcrF family JYA99_RS02255 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JYA99_RS02255 PF00529 HlyD membrane-fusion protein of T1SS JYA99_RS02260 PF00440 Bacterial regulatory proteins, tetR family JYA99_RS02260 PF08361 MAATS-type transcriptional repressor, C-terminal region JYA99_RS02265 PF02954 Bacterial regulatory protein, Fis family JYA99_RS02270 PF01207 Dihydrouridine synthase (Dus) JYA99_RS02280 PF00474 Sodium:solute symporter family JYA99_RS02285 PF06196 Protein of unknown function (DUF997) JYA99_RS02290 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JYA99_RS02290 PF00289 Biotin carboxylase, N-terminal domain JYA99_RS02290 PF02785 Biotin carboxylase C-terminal domain JYA99_RS02295 PF00364 Biotin-requiring enzyme JYA99_RS02300 PF01220 Dehydroquinase class II JYA99_RS02305 PF01794 Ferric reductase like transmembrane component JYA99_RS02310 PF00174 Oxidoreductase molybdopterin binding domain JYA99_RS02320 PF17157 Gammaproteobacterial periplasmic sensor domain JYA99_RS02320 PF00563 EAL domain JYA99_RS02320 PF00990 Diguanylate cyclase, GGDEF domain JYA99_RS02330 PF04085 rod shape-determining protein MreC JYA99_RS02335 PF04093 rod shape-determining protein MreD JYA99_RS02340 PF02545 Maf-like protein JYA99_RS02345 PF10150 Ribonuclease E/G family JYA99_RS02345 PF00575 S1 RNA binding domain JYA99_RS02350 PF13502 AsmA-like C-terminal region JYA99_RS02350 PF13116 Protein of unknown function JYA99_RS02355 PF01523 Putative modulator of DNA gyrase JYA99_RS02360 PF03466 LysR substrate binding domain JYA99_RS02360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYA99_RS02365 PF07869 Protein of unknown function (DUF1656) JYA99_RS02370 PF13533 Biotin-lipoyl like JYA99_RS02375 PF04632 Fusaric acid resistance protein family JYA99_RS02380 PF01337 Barstar (barnase inhibitor) JYA99_RS02385 PF07338 Protein of unknown function (DUF1471) JYA99_RS02390 PF07338 Protein of unknown function (DUF1471) JYA99_RS02395 PF02863 Arginine repressor, C-terminal domain JYA99_RS02395 PF01316 Arginine repressor, DNA binding domain JYA99_RS02400 PF00056 lactate/malate dehydrogenase, NAD binding domain JYA99_RS02400 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JYA99_RS02405 PF13180 PDZ domain JYA99_RS02410 PF13180 PDZ domain JYA99_RS02410 PF00595 PDZ domain JYA99_RS02415 PF06295 Protein of unknown function (DUF1043) JYA99_RS02420 PF03969 AFG1-like ATPase JYA99_RS02425 PF00572 Ribosomal protein L13 JYA99_RS02430 PF00380 Ribosomal protein S9/S16 JYA99_RS02440 PF02798 Glutathione S-transferase, N-terminal domain JYA99_RS02440 PF00043 Glutathione S-transferase, C-terminal domain JYA99_RS02445 PF04386 Stringent starvation protein B JYA99_RS02450 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase JYA99_RS02455 PF07992 Pyridine nucleotide-disulphide oxidoreductase JYA99_RS02455 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster JYA99_RS02460 PF01645 Conserved region in glutamate synthase JYA99_RS02460 PF04898 Glutamate synthase central domain JYA99_RS02460 PF01493 GXGXG motif JYA99_RS02460 PF00310 Glutamine amidotransferases class-II JYA99_RS02465 PF16199 Radical_SAM C-terminal domain JYA99_RS02465 PF04055 Radical SAM superfamily JYA99_RS02470 PF07690 Major Facilitator Superfamily JYA99_RS02475 PF08240 Alcohol dehydrogenase GroES-like domain JYA99_RS02475 PF00107 Zinc-binding dehydrogenase JYA99_RS02480 PF03786 D-mannonate dehydratase (UxuA) JYA99_RS02485 PF18415 Histidine kinase receptor ArcB trans-membrane domain JYA99_RS02485 PF00989 PAS fold JYA99_RS02485 PF00512 His Kinase A (phospho-acceptor) domain JYA99_RS02485 PF00072 Response regulator receiver domain JYA99_RS02485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYA99_RS02485 PF01627 Hpt domain JYA99_RS02495 PF00912 Transglycosylase JYA99_RS02500 PF00381 PTS HPr component phosphorylation site JYA99_RS02505 PF03668 P-loop ATPase protein family JYA99_RS02510 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JYA99_RS02515 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein JYA99_RS02520 PF00309 Sigma-54 factor, Activator interacting domain (AID) JYA99_RS02520 PF04963 Sigma-54 factor, core binding domain JYA99_RS02520 PF04552 Sigma-54, DNA binding domain JYA99_RS02525 PF12399 Branched-chain amino acid ATP-binding cassette transporter JYA99_RS02525 PF00005 ABC transporter JYA99_RS02530 PF03968 OstA-like protein JYA99_RS02535 PF06835 Lipopolysaccharide-assembly, LptC-related JYA99_RS02545 PF00571 CBS domain JYA99_RS02545 PF01380 SIS domain JYA99_RS02550 PF01699 Sodium/calcium exchanger protein JYA99_RS02555 PF00005 ABC transporter JYA99_RS02560 PF02405 Permease MlaE JYA99_RS02565 PF02470 MlaD protein JYA99_RS02570 PF05494 MlaC protein JYA99_RS02575 PF13466 STAS domain JYA99_RS02580 PF01722 BolA-like protein JYA99_RS02585 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JYA99_RS02590 PF13693 Winged helix-turn-helix DNA-binding JYA99_RS02595 PF00348 Polyprenyl synthetase JYA99_RS02600 PF00829 Ribosomal prokaryotic L21 protein JYA99_RS02605 PF01016 Ribosomal L27 protein JYA99_RS02610 PF00892 EamA-like transporter family JYA99_RS02615 PF01018 GTP1/OBG JYA99_RS02615 PF01926 50S ribosome-binding GTPase JYA99_RS02620 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family JYA99_RS02625 PF01272 Transcription elongation factor, GreA/GreB, C-term JYA99_RS02625 PF03449 Transcription elongation factor, N-terminal JYA99_RS02630 PF01985 CRS1 / YhbY (CRM) domain JYA99_RS02635 PF01728 FtsJ-like methyltransferase JYA99_RS02640 PF00004 ATPase family associated with various cellular activities (AAA) JYA99_RS02640 PF17862 AAA+ lid domain JYA99_RS02640 PF01434 Peptidase family M41 JYA99_RS02640 PF06480 FtsH Extracellular JYA99_RS02645 PF00809 Pterin binding enzyme JYA99_RS02650 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JYA99_RS02650 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JYA99_RS02650 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JYA99_RS02650 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JYA99_RS02655 PF03840 Preprotein translocase SecG subunit JYA99_RS02670 PF07437 YfaZ precursor JYA99_RS02675 PF15977 Winged helix-turn-helix DNA binding JYA99_RS02680 PF00764 Arginosuccinate synthase JYA99_RS02690 PF02576 RimP N-terminal domain JYA99_RS02690 PF17384 RimP C-terminal SH3 domain JYA99_RS02695 PF00575 S1 RNA binding domain JYA99_RS02695 PF08529 NusA N-terminal domain JYA99_RS02695 PF13184 NusA-like KH domain JYA99_RS02700 PF08364 Bacterial translation initiation factor IF-2 associated region JYA99_RS02700 PF04760 Translation initiation factor IF-2, N-terminal region JYA99_RS02700 PF00009 Elongation factor Tu GTP binding domain JYA99_RS02700 PF11987 Translation-initiation factor 2 JYA99_RS02705 PF02033 Ribosome-binding factor A JYA99_RS02710 PF01509 TruB family pseudouridylate synthase (N terminal domain) JYA99_RS02710 PF16198 tRNA pseudouridylate synthase B C-terminal domain JYA99_RS02710 PF09157 Pseudouridine synthase II TruB, C-terminal JYA99_RS02715 PF00312 Ribosomal protein S15 JYA99_RS02720 PF00575 S1 RNA binding domain JYA99_RS02720 PF03725 3' exoribonuclease family, domain 2 JYA99_RS02720 PF01138 3' exoribonuclease family, domain 1 JYA99_RS02720 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain JYA99_RS02720 PF00013 KH domain JYA99_RS02725 PF13181 Tetratricopeptide repeat JYA99_RS02725 PF07719 Tetratricopeptide repeat JYA99_RS02735 PF03880 DbpA RNA binding domain JYA99_RS02735 PF00270 DEAD/DEAH box helicase JYA99_RS02735 PF12343 Cold shock protein DEAD box A JYA99_RS02735 PF00271 Helicase conserved C-terminal domain JYA99_RS02740 PF03222 Tryptophan/tyrosine permease family JYA99_RS02745 PF00296 Luciferase-like monooxygenase JYA99_RS02750 PF01136 Peptidase family U32 JYA99_RS02755 PF01136 Peptidase family U32 JYA99_RS02760 PF02036 SCP-2 sterol transfer family JYA99_RS02765 PF13508 Acetyltransferase (GNAT) domain JYA99_RS02770 PF01541 GIY-YIG catalytic domain JYA99_RS02780 PF01965 DJ-1/PfpI family JYA99_RS02785 PF13460 NAD(P)H-binding JYA99_RS02790 PF03773 Predicted permease JYA99_RS02795 PF04972 BON domain JYA99_RS02800 PF13580 SIS domain JYA99_RS02805 PF02021 Uncharacterised protein family UPF0102 JYA99_RS02810 PF04348 LppC putative lipoprotein JYA99_RS02815 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JYA99_RS02820 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus JYA99_RS02820 PF08666 SAF domain JYA99_RS02825 PF07690 Major Facilitator Superfamily JYA99_RS02830 PF03328 HpcH/HpaI aldolase/citrate lyase family JYA99_RS02835 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JYA99_RS02835 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JYA99_RS02840 PF02595 Glycerate kinase family JYA99_RS02865 PF02678 Pirin JYA99_RS02865 PF17954 Quercetinase C-terminal cupin domain JYA99_RS02870 PF03466 LysR substrate binding domain JYA99_RS02870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYA99_RS02875 PF05656 Protein of unknown function (DUF805) JYA99_RS02880 PF13409 Glutathione S-transferase, N-terminal domain JYA99_RS02885 PF07681 DoxX JYA99_RS02890 PF13997 YqjK-like protein JYA99_RS02895 PF07332 Putative Actinobacterial Holin-X, holin superfamily III JYA99_RS02900 PF05957 Bacterial protein of unknown function (DUF883) JYA99_RS02905 PF06476 Protein of unknown function (DUF1090) JYA99_RS02910 PF13721 SecD export protein N-terminal TM region JYA99_RS02915 PF09335 SNARE associated Golgi protein JYA99_RS02920 PF00392 Bacterial regulatory proteins, gntR family JYA99_RS02920 PF07729 FCD domain JYA99_RS02925 PF07690 Major Facilitator Superfamily JYA99_RS02930 PF02614 Glucuronate isomerase JYA99_RS02935 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus JYA99_RS02935 PF08666 SAF domain JYA99_RS02940 PF10688 Bacterial inner membrane protein JYA99_RS02945 PF00375 Sodium:dicarboxylate symporter family JYA99_RS02950 PF03741 Integral membrane protein TerC family JYA99_RS02955 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JYA99_RS02960 PF01863 Protein of unknown function DUF45 JYA99_RS02975 PF05175 Methyltransferase small domain JYA99_RS02980 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JYA99_RS02980 PF07992 Pyridine nucleotide-disulphide oxidoreductase JYA99_RS02985 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JYA99_RS02985 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JYA99_RS02990 PF04198 Putative sugar-binding domain JYA99_RS02995 PF00005 ABC transporter JYA99_RS03000 PF02653 Branched-chain amino acid transport system / permease component JYA99_RS03005 PF02653 Branched-chain amino acid transport system / permease component JYA99_RS03010 PF13407 Periplasmic binding protein domain JYA99_RS03015 PF01791 DeoC/LacD family aldolase JYA99_RS03020 PF03992 Antibiotic biosynthesis monooxygenase JYA99_RS03025 PF00202 Aminotransferase class-III JYA99_RS03030 PF03551 Transcriptional regulator PadR-like family JYA99_RS03035 PF08021 Siderophore-interacting FAD-binding domain JYA99_RS03035 PF04954 Siderophore-interacting protein JYA99_RS03040 PF02734 DAK2 domain JYA99_RS03040 PF02733 Dak1 domain JYA99_RS03045 PF03610 PTS system fructose IIA component JYA99_RS03045 PF05524 PEP-utilising enzyme, N-terminal JYA99_RS03045 PF00391 PEP-utilising enzyme, mobile domain JYA99_RS03045 PF00381 PTS HPr component phosphorylation site JYA99_RS03050 PF02734 DAK2 domain JYA99_RS03055 PF02733 Dak1 domain JYA99_RS03065 PF00465 Iron-containing alcohol dehydrogenase JYA99_RS03070 PF00158 Sigma-54 interaction domain JYA99_RS03070 PF02954 Bacterial regulatory protein, Fis family JYA99_RS03070 PF00989 PAS fold JYA99_RS03075 PF01923 Cobalamin adenosyltransferase JYA99_RS03080 PF02288 Dehydratase medium subunit JYA99_RS03085 PF00465 Iron-containing alcohol dehydrogenase JYA99_RS03090 PF03928 Haem-degrading JYA99_RS03095 PF02286 Dehydratase large subunit JYA99_RS03100 PF02288 Dehydratase medium subunit JYA99_RS03105 PF02287 Dehydratase small subunit JYA99_RS03110 PF18427 DD-reactivating factor swiveling domain JYA99_RS03110 PF08841 Diol dehydratase reactivase ATPase-like domain JYA99_RS03115 PF00230 Major intrinsic protein JYA99_RS03120 PF06411 HdeA/HdeB family JYA99_RS03125 PF03729 Short repeat of unknown function (DUF308) JYA99_RS03130 PF10938 YfdX protein JYA99_RS03135 PF00512 His Kinase A (phospho-acceptor) domain JYA99_RS03135 PF01627 Hpt domain JYA99_RS03135 PF00072 Response regulator receiver domain JYA99_RS03135 PF00497 Bacterial extracellular solute-binding proteins, family 3 JYA99_RS03135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYA99_RS03140 PF00196 Bacterial regulatory proteins, luxR family JYA99_RS03140 PF00072 Response regulator receiver domain JYA99_RS03160 PF03167 Uracil DNA glycosylase superfamily JYA99_RS03165 PF04546 Sigma-70, non-essential region JYA99_RS03165 PF04545 Sigma-70, region 4 JYA99_RS03165 PF03979 Sigma-70 factor, region 1.1 JYA99_RS03165 PF04539 Sigma-70 region 3 JYA99_RS03165 PF04542 Sigma-70 region 2 JYA99_RS03165 PF00140 Sigma-70 factor, region 1.2 JYA99_RS03170 PF10410 DnaB-helicase binding domain of primase JYA99_RS03170 PF08278 DNA primase DnaG DnaB-binding JYA99_RS03170 PF01807 CHC2 zinc finger JYA99_RS03170 PF08275 DNA primase catalytic core, N-terminal domain JYA99_RS03175 PF01165 Ribosomal protein S21 JYA99_RS03180 PF00814 Glycoprotease family JYA99_RS03190 PF02492 CobW/HypB/UreG, nucleotide-binding domain JYA99_RS03195 PF01730 UreF JYA99_RS03200 PF02814 UreE urease accessory protein, N-terminal domain JYA99_RS03200 PF05194 UreE urease accessory protein, C-terminal domain JYA99_RS03205 PF01979 Amidohydrolase family JYA99_RS03205 PF00449 Urease alpha-subunit, N-terminal domain JYA99_RS03210 PF00699 Urease beta subunit JYA99_RS03215 PF00547 Urease, gamma subunit JYA99_RS03220 PF01774 UreD urease accessory protein JYA99_RS03235 PF02660 Glycerol-3-phosphate acyltransferase JYA99_RS03240 PF02152 Dihydroneopterin aldolase JYA99_RS03245 PF02673 Bacitracin resistance protein BacA JYA99_RS03250 PF12627 Probable RNA and SrmB- binding site of polymerase A JYA99_RS03250 PF01966 HD domain JYA99_RS03250 PF01743 Poly A polymerase head domain JYA99_RS03255 PF08239 Bacterial SH3 domain JYA99_RS03260 PF01928 CYTH domain JYA99_RS03265 PF08335 GlnD PII-uridylyltransferase JYA99_RS03265 PF03710 Glutamate-ammonia ligase adenylyltransferase JYA99_RS03270 PF01467 Cytidylyltransferase-like JYA99_RS03270 PF00294 pfkB family carbohydrate kinase JYA99_RS03280 PF08971 Glycogen synthesis protein JYA99_RS03285 PF04380 Membrane fusogenic activity JYA99_RS03290 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase JYA99_RS03295 PF02535 ZIP Zinc transporter JYA99_RS03300 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase JYA99_RS03305 PF03738 Glutathionylspermidine synthase preATP-grasp JYA99_RS03310 PF06693 Protein of unknown function (DUF1190) JYA99_RS03315 PF02321 Outer membrane efflux protein JYA99_RS03320 PF00293 NUDIX domain JYA99_RS03325 PF06853 Protein of unknown function (DUF1249) JYA99_RS03330 PF00149 Calcineurin-like phosphoesterase JYA99_RS03335 PF05728 Uncharacterised protein family (UPF0227) JYA99_RS03340 PF00204 DNA gyrase B JYA99_RS03340 PF00986 DNA gyrase B subunit, carboxyl terminus JYA99_RS03340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYA99_RS03340 PF01751 Toprim domain JYA99_RS03345 PF03992 Antibiotic biosynthesis monooxygenase JYA99_RS03350 PF02525 Flavodoxin-like fold JYA99_RS03355 PF08521 Two-component sensor kinase N-terminal JYA99_RS03355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYA99_RS03355 PF00512 His Kinase A (phospho-acceptor) domain JYA99_RS03360 PF00072 Response regulator receiver domain JYA99_RS03360 PF00486 Transcriptional regulatory protein, C terminal JYA99_RS03365 PF04076 Bacterial OB fold (BOF) protein JYA99_RS03370 PF06445 GyrI-like small molecule binding domain JYA99_RS03375 PF03989 DNA gyrase C-terminal domain, beta-propeller JYA99_RS03375 PF00521 DNA gyrase/topoisomerase IV, subunit A JYA99_RS03380 PF01553 Acyltransferase JYA99_RS03385 PF07732 Multicopper oxidase JYA99_RS03385 PF07731 Multicopper oxidase JYA99_RS03385 PF00394 Multicopper oxidase JYA99_RS03390 PF08497 Radical SAM N-terminal JYA99_RS03390 PF11842 Domain of unknown function (DUF3362) JYA99_RS03390 PF04055 Radical SAM superfamily JYA99_RS03400 PF00248 Aldo/keto reductase family JYA99_RS03405 PF00465 Iron-containing alcohol dehydrogenase JYA99_RS03410 PF06719 AraC-type transcriptional regulator N-terminus JYA99_RS03410 PF12833 Helix-turn-helix domain JYA99_RS03415 PF09335 SNARE associated Golgi protein JYA99_RS03420 PF01053 Cys/Met metabolism PLP-dependent enzyme JYA99_RS03425 PF01618 MotA/TolQ/ExbB proton channel family JYA99_RS03430 PF02472 Biopolymer transport protein ExbD/TolR JYA99_RS03440 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain JYA99_RS03440 PF04616 Glycosyl hydrolases family 43 JYA99_RS03445 PF03350 Uncharacterized protein family, UPF0114 JYA99_RS03450 PF01738 Dienelactone hydrolase family JYA99_RS03455 PF11115 Protein of unknown function (DUF2623) JYA99_RS03460 PF02798 Glutathione S-transferase, N-terminal domain JYA99_RS03475 PF03738 Glutathionylspermidine synthase preATP-grasp JYA99_RS03475 PF05257 CHAP domain JYA99_RS03480 PF00155 Aminotransferase class I and II JYA99_RS03500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYA99_RS03500 PF03466 LysR substrate binding domain JYA99_RS03505 PF01053 Cys/Met metabolism PLP-dependent enzyme JYA99_RS03510 PF00571 CBS domain JYA99_RS03510 PF00291 Pyridoxal-phosphate dependent enzyme JYA99_RS03535 PF04474 Protein of unknown function (DUF554) JYA99_RS03540 PF01276 Orn/Lys/Arg decarboxylase, major domain JYA99_RS03540 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain JYA99_RS03540 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain JYA99_RS03545 PF03825 Nucleoside H+ symporter JYA99_RS03550 PF01464 Transglycosylase SLT domain JYA99_RS03550 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain JYA99_RS03555 PF04362 Bacterial Fe(2+) trafficking JYA99_RS03560 PF00633 Helix-hairpin-helix motif JYA99_RS03560 PF10576 Iron-sulfur binding domain of endonuclease III JYA99_RS03560 PF14815 NUDIX domain JYA99_RS03560 PF00730 HhH-GPD superfamily base excision DNA repair protein JYA99_RS03565 PF02390 Putative methyltransferase JYA99_RS03570 PF04320 Protein with unknown function (DUF469) JYA99_RS03575 PF11101 Protein of unknown function (DUF2884) JYA99_RS03580 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component JYA99_RS03585 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component JYA99_RS03585 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component JYA99_RS03595 PF04055 Radical SAM superfamily JYA99_RS03595 PF06969 HemN C-terminal domain JYA99_RS03600 PF01725 Ham1 family JYA99_RS03605 PF02594 Uncharacterised ACR, YggU family COG1872 JYA99_RS03610 PF02325 YGGT family JYA99_RS03615 PF01168 Alanine racemase, N-terminal domain JYA99_RS03620 PF00437 Type II/IV secretion system protein JYA99_RS03625 PF00196 Bacterial regulatory proteins, luxR family JYA99_RS03630 PF03652 Holliday junction resolvase JYA99_RS03635 PF02622 Uncharacterized ACR, COG1678 JYA99_RS03640 PF02951 Prokaryotic glutathione synthetase, N-terminal domain JYA99_RS03640 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain JYA99_RS03645 PF04452 RNA methyltransferase JYA99_RS03650 PF04231 Endonuclease I JYA99_RS03655 PF17283 SprT-like zinc ribbon domain JYA99_RS03655 PF10263 SprT-like family JYA99_RS03660 PF00083 Sugar (and other) transporter JYA99_RS03665 PF00438 S-adenosylmethionine synthetase, N-terminal domain JYA99_RS03665 PF02772 S-adenosylmethionine synthetase, central domain JYA99_RS03665 PF02773 S-adenosylmethionine synthetase, C-terminal domain JYA99_RS03680 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain JYA99_RS03680 PF17944 Arginine decarboxylase C-terminal helical extension JYA99_RS03680 PF17810 Arginine decarboxylase helical bundle domain JYA99_RS03685 PF00491 Arginase family JYA99_RS03690 PF03573 outer membrane porin, OprD family JYA99_RS03695 PF01435 Peptidase family M48 JYA99_RS03700 PF02780 Transketolase, C-terminal domain JYA99_RS03700 PF00456 Transketolase, thiamine diphosphate binding domain JYA99_RS03700 PF02779 Transketolase, pyrimidine binding domain JYA99_RS03705 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JYA99_RS03705 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JYA99_RS03710 PF00162 Phosphoglycerate kinase JYA99_RS03715 PF01116 Fructose-bisphosphate aldolase class-II JYA99_RS03720 PF05552 Conserved TM helix JYA99_RS03720 PF00924 Mechanosensitive ion channel JYA99_RS03725 PF01810 LysE type translocator JYA99_RS03730 PF04402 Protein of unknown function (DUF541) JYA99_RS03735 PF03466 LysR substrate binding domain JYA99_RS03735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYA99_RS03740 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) JYA99_RS03745 PF01842 ACT domain JYA99_RS03745 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JYA99_RS03745 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JYA99_RS03750 PF01812 5-formyltetrahydrofolate cyclo-ligase family JYA99_RS03760 PF05164 Cell division protein ZapA JYA99_RS03765 PF03695 Uncharacterised protein family (UPF0149) JYA99_RS03770 PF00557 Metallopeptidase family M24 JYA99_RS03770 PF05195 Aminopeptidase P, N-terminal domain JYA99_RS03775 PF01494 FAD binding domain JYA99_RS03780 PF01494 FAD binding domain JYA99_RS03785 PF08669 Glycine cleavage T-protein C-terminal barrel domain JYA99_RS03785 PF01571 Aminomethyltransferase folate-binding domain JYA99_RS03790 PF01597 Glycine cleavage H-protein JYA99_RS03795 PF02347 Glycine cleavage system P-protein JYA99_RS03810 PF00578 AhpC/TSA family JYA99_RS03830 PF00232 Glycosyl hydrolase family 1 JYA99_RS03835 PF01418 Helix-turn-helix domain, rpiR family JYA99_RS03835 PF01380 SIS domain JYA99_RS03840 PF04266 ASCH domain JYA99_RS03845 PF03006 Haemolysin-III related JYA99_RS03850 PF01571 Aminomethyltransferase folate-binding domain JYA99_RS03855 PF03937 Flavinator of succinate dehydrogenase JYA99_RS03860 PF07254 Membrane-bound toxin component of toxin-antitoxin system JYA99_RS03865 PF00258 Flavodoxin JYA99_RS03870 PF02899 Phage integrase, N-terminal SAM-like domain JYA99_RS03870 PF00589 Phage integrase family JYA99_RS03875 PF10411 Disulfide bond isomerase protein N-terminus JYA99_RS03875 PF13098 Thioredoxin-like domain JYA99_RS03880 PF17768 RecJ OB domain JYA99_RS03880 PF02272 DHHA1 domain JYA99_RS03880 PF01368 DHH family JYA99_RS03890 PF01336 OB-fold nucleic acid binding domain JYA99_RS03890 PF00152 tRNA synthetases class II (D, K and N) JYA99_RS03895 PF00293 NUDIX domain JYA99_RS03900 PF01476 LysM domain JYA99_RS03900 PF01551 Peptidase family M23 JYA99_RS03910 PF02899 Phage integrase, N-terminal SAM-like domain JYA99_RS03910 PF00589 Phage integrase family JYA99_RS03935 PF07690 Major Facilitator Superfamily JYA99_RS03940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYA99_RS03940 PF03466 LysR substrate binding domain JYA99_RS03950 PF00248 Aldo/keto reductase family JYA99_RS03955 PF02525 Flavodoxin-like fold JYA99_RS03965 PF03466 LysR substrate binding domain JYA99_RS03965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYA99_RS03985 PF01022 Bacterial regulatory protein, arsR family JYA99_RS03990 PF02040 Arsenical pump membrane protein JYA99_RS03995 PF03960 ArsC family JYA99_RS04000 PF00854 POT family JYA99_RS04005 PF08986 Domain of unknown function (DUF1889) JYA99_RS04010 PF02321 Outer membrane efflux protein JYA99_RS04015 PF04632 Fusaric acid resistance protein family JYA99_RS04020 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JYA99_RS04020 PF00529 HlyD membrane-fusion protein of T1SS JYA99_RS04025 PF17090 Uncharacterised protein family JYA99_RS04030 PF06902 Divergent 4Fe-4S mono-cluster JYA99_RS04035 PF14542 GCN5-related N-acetyl-transferase JYA99_RS04045 PF09160 FimH, mannose binding JYA99_RS04045 PF00419 Fimbrial protein JYA99_RS04055 PF00419 Fimbrial protein JYA99_RS04060 PF13953 PapC C-terminal domain JYA99_RS04060 PF00577 Outer membrane usher protein JYA99_RS04060 PF13954 PapC N-terminal domain JYA99_RS04065 PF02753 Pili assembly chaperone PapD, C-terminal domain JYA99_RS04065 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain JYA99_RS04070 PF00419 Fimbrial protein JYA99_RS04075 PF00419 Fimbrial protein JYA99_RS04080 PF00589 Phage integrase family JYA99_RS04085 PF00589 Phage integrase family JYA99_RS04090 PF03824 High-affinity nickel-transport protein JYA99_RS04095 PF01047 MarR family JYA99_RS04100 PF00892 EamA-like transporter family JYA99_RS04110 PF00419 Fimbrial protein JYA99_RS04115 PF02753 Pili assembly chaperone PapD, C-terminal domain JYA99_RS04115 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain JYA99_RS04120 PF00577 Outer membrane usher protein JYA99_RS04120 PF13953 PapC C-terminal domain JYA99_RS04120 PF13954 PapC N-terminal domain JYA99_RS04125 PF00419 Fimbrial protein JYA99_RS04140 PF00072 Response regulator receiver domain JYA99_RS04140 PF00196 Bacterial regulatory proteins, luxR family JYA99_RS04150 PF00248 Aldo/keto reductase family JYA99_RS04155 PF03222 Tryptophan/tyrosine permease family JYA99_RS04165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYA99_RS04165 PF03466 LysR substrate binding domain JYA99_RS04170 PF00108 Thiolase, N-terminal domain JYA99_RS04170 PF02803 Thiolase, C-terminal domain JYA99_RS04175 PF06178 Oligogalacturonate-specific porin protein (KdgM) JYA99_RS04180 PF14583 Oligogalacturonate lyase JYA99_RS04190 PF00083 Sugar (and other) transporter JYA99_RS04195 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JYA99_RS04195 PF00356 Bacterial regulatory proteins, lacI family JYA99_RS04205 PF01306 LacY proton/sugar symporter JYA99_RS04210 PF00251 Glycosyl hydrolases family 32 N-terminal domain JYA99_RS04210 PF08244 Glycosyl hydrolases family 32 C terminal JYA99_RS04225 PF17912 MalK OB fold domain JYA99_RS04225 PF00005 ABC transporter JYA99_RS04230 PF00528 Binding-protein-dependent transport system inner membrane component JYA99_RS04235 PF00528 Binding-protein-dependent transport system inner membrane component JYA99_RS04240 PF16867 Dimethlysulfonioproprionate lyase JYA99_RS04245 PF01177 Asp/Glu/Hydantoin racemase JYA99_RS04250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYA99_RS04250 PF03466 LysR substrate binding domain JYA99_RS04255 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain JYA99_RS04255 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain JYA99_RS04260 PF00356 Bacterial regulatory proteins, lacI family JYA99_RS04265 PF02378 Phosphotransferase system, EIIC JYA99_RS04270 PF00232 Glycosyl hydrolase family 1 JYA99_RS04275 PF00392 Bacterial regulatory proteins, gntR family JYA99_RS04275 PF07729 FCD domain JYA99_RS04285 PF00356 Bacterial regulatory proteins, lacI family JYA99_RS04295 PF01553 Acyltransferase JYA99_RS04295 PF00501 AMP-binding enzyme JYA99_RS04300 PF07690 Major Facilitator Superfamily JYA99_RS04305 PF00248 Aldo/keto reductase family JYA99_RS04310 PF06004 Bacterial protein of unknown function (DUF903) JYA99_RS04315 PF03741 Integral membrane protein TerC family JYA99_RS04320 PF02976 DNA mismatch repair enzyme MutH JYA99_RS04330 PF00293 NUDIX domain JYA99_RS04335 PF02896 PEP-utilising enzyme, TIM barrel domain JYA99_RS04335 PF00391 PEP-utilising enzyme, mobile domain JYA99_RS04335 PF05524 PEP-utilising enzyme, N-terminal JYA99_RS04335 PF01590 GAF domain JYA99_RS04340 PF01790 Prolipoprotein diacylglyceryl transferase JYA99_RS04345 PF00303 Thymidylate synthase JYA99_RS04350 PF07963 Prokaryotic N-terminal methylation motif JYA99_RS04355 PF07963 Prokaryotic N-terminal methylation motif JYA99_RS04360 PF10713 Protein of unknown function (DUF2509) JYA99_RS04365 PF12528 Type II secretion prepilin peptidase dependent protein C JYA99_RS04365 PF07963 Prokaryotic N-terminal methylation motif JYA99_RS04370 PF17946 RecC C-terminal domain JYA99_RS04375 PF16187 Middle or third domain of peptidase_M16 JYA99_RS04375 PF00675 Insulinase (Peptidase family M16) JYA99_RS04375 PF05193 Peptidase M16 inactive domain JYA99_RS04380 PF12705 PD-(D/E)XK nuclease superfamily JYA99_RS04380 PF00580 UvrD/REP helicase N-terminal domain JYA99_RS04380 PF13361 UvrD-like helicase C-terminal domain JYA99_RS04385 PF13538 UvrD-like helicase C-terminal domain JYA99_RS04395 PF00583 Acetyltransferase (GNAT) family JYA99_RS04395 PF00696 Amino acid kinase family JYA99_RS04400 PF11741 AMIN domain JYA99_RS04400 PF01520 N-acetylmuramoyl-L-alanine amidase JYA99_RS04405 PF00155 Aminotransferase class I and II JYA99_RS04410 PF00288 GHMP kinases N terminal domain JYA99_RS04415 PF00871 Acetokinase family JYA99_RS04420 PF10662 Ethanolamine utilisation - propanediol utilisation JYA99_RS04425 PF00936 BMC domain JYA99_RS04435 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit JYA99_RS04435 PF13375 RnfC Barrel sandwich hybrid domain JYA99_RS04435 PF13237 4Fe-4S dicluster domain JYA99_RS04435 PF10531 SLBB domain JYA99_RS04440 PF00171 Aldehyde dehydrogenase family JYA99_RS04440 PF00465 Iron-containing alcohol dehydrogenase JYA99_RS04445 PF00171 Aldehyde dehydrogenase family JYA99_RS04450 PF01923 Cobalamin adenosyltransferase JYA99_RS04455 PF03319 Ethanolamine utilisation protein EutN/carboxysome JYA99_RS04465 PF06130 Phosphate propanoyltransferase JYA99_RS04470 PF00936 BMC domain JYA99_RS04475 PF00936 BMC domain JYA99_RS04485 PF08841 Diol dehydratase reactivase ATPase-like domain JYA99_RS04485 PF18427 DD-reactivating factor swiveling domain JYA99_RS04490 PF02287 Dehydratase small subunit JYA99_RS04495 PF02288 Dehydratase medium subunit JYA99_RS04500 PF02286 Dehydratase large subunit JYA99_RS04505 PF00936 BMC domain JYA99_RS04510 PF00936 BMC domain JYA99_RS04515 PF00230 Major intrinsic protein JYA99_RS04520 PF12833 Helix-turn-helix domain JYA99_RS04520 PF10114 Sensory domain found in PocR JYA99_RS04525 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain JYA99_RS04525 PF07685 CobB/CobQ-like glutamine amidotransferase domain JYA99_RS04530 PF03186 CobD/Cbib protein JYA99_RS04535 PF02570 Precorrin-8X methylmutase JYA99_RS04540 PF01888 CbiD JYA99_RS04545 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JYA99_RS04550 PF05175 Methyltransferase small domain JYA99_RS04555 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JYA99_RS04560 PF01890 Cobalamin synthesis G C-terminus JYA99_RS04560 PF11760 Cobalamin synthesis G N-terminal JYA99_RS04560 PF11761 Cobalamin biosynthesis central region JYA99_RS04565 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JYA99_RS04570 PF02571 Precorrin-6x reductase CbiJ/CobK JYA99_RS04575 PF06180 Cobalt chelatase (CbiK) JYA99_RS04580 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JYA99_RS04585 PF01891 Cobalt uptake substrate-specific transmembrane region JYA99_RS04590 PF02553 Cobalt transport protein component CbiN JYA99_RS04595 PF02361 Cobalt transport protein JYA99_RS04600 PF00005 ABC transporter JYA99_RS04605 PF07685 CobB/CobQ-like glutamine amidotransferase domain JYA99_RS04610 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase JYA99_RS04615 PF02277 Phosphoribosyltransferase JYA99_RS04690 PF13296 Putative type VI secretion system Rhs element Vgr JYA99_RS04690 PF04717 Type VI secretion system, phage-baseplate injector JYA99_RS04690 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) JYA99_RS04695 PF13488 Glycine zipper JYA99_RS04695 PF00691 OmpA family JYA99_RS04730 PF03562 MltA specific insert domain JYA99_RS04730 PF06725 3D domain JYA99_RS04735 PF00899 ThiF family JYA99_RS04740 PF02657 Fe-S metabolism associated domain JYA99_RS04745 PF00266 Aminotransferase class-V JYA99_RS04750 PF06004 Bacterial protein of unknown function (DUF903) JYA99_RS04755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYA99_RS04755 PF03466 LysR substrate binding domain JYA99_RS04760 PF04241 Protein of unknown function (DUF423) JYA99_RS04765 PF01728 FtsJ-like methyltransferase JYA99_RS04765 PF18125 RlmM ferredoxin-like domain JYA99_RS04770 PF00455 DeoR C terminal sensor domain JYA99_RS04770 PF08220 DeoR-like helix-turn-helix domain JYA99_RS04775 PF05025 RbsD / FucU transport protein family JYA99_RS04795 PF00596 Class II Aldolase and Adducin N-terminal domain JYA99_RS04800 PF00465 Iron-containing alcohol dehydrogenase JYA99_RS04805 PF01367 5'-3' exonuclease, C-terminal SAM fold JYA99_RS04805 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain JYA99_RS04810 PF00158 Sigma-54 interaction domain JYA99_RS04820 PF00296 Luciferase-like monooxygenase JYA99_RS04830 PF00296 Luciferase-like monooxygenase JYA99_RS04835 PF00005 ABC transporter JYA99_RS04840 PF00528 Binding-protein-dependent transport system inner membrane component JYA99_RS04845 PF03180 NLPA lipoprotein JYA99_RS04850 PF07690 Major Facilitator Superfamily JYA99_RS04860 PF09084 NMT1/THI5 like JYA99_RS04865 PF03315 Serine dehydratase beta chain JYA99_RS04865 PF03313 Serine dehydratase alpha chain JYA99_RS04875 PF11892 Domain of unknown function (DUF3412) JYA99_RS04875 PF03641 Possible lysine decarboxylase JYA99_RS04875 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases JYA99_RS04880 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term JYA99_RS04880 PF14489 QueF-like protein JYA99_RS04885 PF07348 Syd protein (SUKH-2) JYA99_RS04890 PF04287 tRNA pseudouridine synthase C JYA99_RS04895 PF00849 RNA pseudouridylate synthase JYA99_RS04900 PF00258 Flavodoxin JYA99_RS04905 PF07690 Major Facilitator Superfamily JYA99_RS04910 PF13378 Enolase C-terminal domain-like JYA99_RS04910 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JYA99_RS04915 PF13378 Enolase C-terminal domain-like JYA99_RS04920 PF02595 Glycerate kinase family JYA99_RS04925 PF01627 Hpt domain JYA99_RS04925 PF00512 His Kinase A (phospho-acceptor) domain JYA99_RS04925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYA99_RS04925 PF00072 Response regulator receiver domain JYA99_RS04925 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) JYA99_RS04925 PF00672 HAMP domain JYA99_RS04930 PF05958 tRNA (Uracil-5-)-methyltransferase JYA99_RS04930 PF01938 TRAM domain JYA99_RS04935 PF13291 ACT domain JYA99_RS04935 PF02824 TGS domain JYA99_RS04935 PF04607 Region found in RelA / SpoT proteins JYA99_RS04940 PF03819 MazG nucleotide pyrophosphohydrolase domain JYA99_RS04945 PF00117 Glutamine amidotransferase class-I JYA99_RS04945 PF06418 CTP synthase N-terminus JYA99_RS04950 PF00113 Enolase, C-terminal TIM barrel domain JYA99_RS04950 PF03952 Enolase, N-terminal domain JYA99_RS04960 PF04055 Radical SAM superfamily JYA99_RS04965 PF01242 6-pyruvoyl tetrahydropterin synthase JYA99_RS04970 PF00667 FAD binding domain JYA99_RS04970 PF00175 Oxidoreductase NAD-binding domain JYA99_RS04970 PF00258 Flavodoxin JYA99_RS04975 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JYA99_RS04975 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JYA99_RS04980 PF01507 Phosphoadenosine phosphosulfate reductase family JYA99_RS04985 PF04389 Peptidase family M28 JYA99_RS04990 PF10414 Sirohaem synthase dimerisation region JYA99_RS04990 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JYA99_RS04990 PF14824 Sirohaem biosynthesis protein central JYA99_RS04995 PF01507 Phosphoadenosine phosphosulfate reductase family JYA99_RS05000 PF00009 Elongation factor Tu GTP binding domain JYA99_RS05010 PF12084 Protein of unknown function (DUF3561) JYA99_RS05015 PF04977 Septum formation initiator JYA99_RS05020 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase JYA99_RS05025 PF02542 YgbB family JYA99_RS05030 PF01142 tRNA pseudouridine synthase D (TruD) JYA99_RS05035 PF01975 Survival protein SurE JYA99_RS05045 PF01551 Peptidase family M23 JYA99_RS05045 PF01476 LysM domain JYA99_RS05050 PF00140 Sigma-70 factor, region 1.2 JYA99_RS05050 PF04545 Sigma-70, region 4 JYA99_RS05050 PF04539 Sigma-70 region 3 JYA99_RS05050 PF04542 Sigma-70 region 2 JYA99_RS05060 PF07690 Major Facilitator Superfamily JYA99_RS05065 PF03466 LysR substrate binding domain JYA99_RS05065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYA99_RS05070 PF01047 MarR family JYA99_RS05075 PF02441 Flavoprotein JYA99_RS05080 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase JYA99_RS05090 PF01848 Hok/gef family JYA99_RS05095 PF05192 MutS domain III JYA99_RS05095 PF05188 MutS domain II JYA99_RS05095 PF05190 MutS family domain IV JYA99_RS05095 PF00488 MutS domain V JYA99_RS05095 PF01624 MutS domain I JYA99_RS05115 PF00005 ABC transporter JYA99_RS05120 PF01032 FecCD transport family JYA99_RS05125 PF01497 Periplasmic binding protein JYA99_RS05130 PF05171 Haemin-degrading HemS.ChuX domain JYA99_RS05135 PF00593 TonB dependent receptor JYA99_RS05135 PF07715 TonB-dependent Receptor Plug Domain JYA99_RS05145 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JYA99_RS05145 PF00205 Thiamine pyrophosphate enzyme, central domain JYA99_RS05145 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JYA99_RS05150 PF03547 Membrane transport protein JYA99_RS05160 PF11756 Nitrous oxide-stimulated promoter JYA99_RS05165 PF00950 ABC 3 transport family JYA99_RS05170 PF00950 ABC 3 transport family JYA99_RS05175 PF00005 ABC transporter JYA99_RS05180 PF01297 Zinc-uptake complex component A periplasmic JYA99_RS05185 PF00356 Bacterial regulatory proteins, lacI family JYA99_RS05190 PF00480 ROK family JYA99_RS05195 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit JYA99_RS05200 PF02378 Phosphotransferase system, EIIC JYA99_RS05205 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JYA99_RS05210 PF02378 Phosphotransferase system, EIIC JYA99_RS05215 PF02264 LamB porin JYA99_RS05225 PF00232 Glycosyl hydrolase family 1 JYA99_RS05230 PF01590 GAF domain JYA99_RS05230 PF02954 Bacterial regulatory protein, Fis family JYA99_RS05230 PF00158 Sigma-54 interaction domain JYA99_RS05235 PF00586 AIR synthase related protein, N-terminal domain JYA99_RS05235 PF02769 AIR synthase related protein, C-terminal domain JYA99_RS05240 PF01924 Hydrogenase formation hypA family JYA99_RS05245 PF01455 HupF/HypC family JYA99_RS05250 PF02492 CobW/HypB/UreG, nucleotide-binding domain JYA99_RS05255 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA JYA99_RS05260 PF11046 Transcriptional repressor of hyc and hyp operons JYA99_RS05265 PF13247 4Fe-4S dicluster domain JYA99_RS05270 PF00361 Proton-conducting membrane transporter JYA99_RS05275 PF00146 NADH dehydrogenase JYA99_RS05280 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit JYA99_RS05280 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit JYA99_RS05280 PF00374 Nickel-dependent hydrogenase JYA99_RS05285 PF12838 4Fe-4S dicluster domain JYA99_RS05290 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit JYA99_RS05295 PF07450 Formate hydrogenlyase maturation protein HycH JYA99_RS05300 PF01750 Hydrogenase maturation protease JYA99_RS05305 PF08845 Toxin SymE, type I toxin-antitoxin system JYA99_RS05310 PF00232 Glycosyl hydrolase family 1 JYA99_RS05315 PF00367 phosphotransferase system, EIIB JYA99_RS05315 PF02378 Phosphotransferase system, EIIC JYA99_RS05320 PF00356 Bacterial regulatory proteins, lacI family JYA99_RS05325 PF13247 4Fe-4S dicluster domain JYA99_RS05325 PF12800 4Fe-4S binding domain JYA99_RS05330 PF17788 HypF Kae1-like domain JYA99_RS05330 PF01300 Telomere recombination JYA99_RS05330 PF00708 Acylphosphatase JYA99_RS05330 PF07503 HypF finger JYA99_RS05335 PF03824 High-affinity nickel-transport protein JYA99_RS05340 PF18113 Rubredoxin binding C-terminal domain JYA99_RS05340 PF07992 Pyridine nucleotide-disulphide oxidoreductase JYA99_RS05345 PF00301 Rubredoxin JYA99_RS05345 PF00258 Flavodoxin JYA99_RS05345 PF00753 Metallo-beta-lactamase superfamily JYA99_RS05350 PF01590 GAF domain JYA99_RS05350 PF00158 Sigma-54 interaction domain JYA99_RS05355 PF00571 CBS domain JYA99_RS05355 PF01380 SIS domain JYA99_RS05360 PF08220 DeoR-like helix-turn-helix domain JYA99_RS05360 PF00455 DeoR C terminal sensor domain JYA99_RS05365 PF06923 Glucitol operon activator protein (GutM) JYA99_RS05370 PF00106 short chain dehydrogenase JYA99_RS05375 PF03829 PTS system glucitol/sorbitol-specific IIA component JYA99_RS05380 PF03612 Sorbitol phosphotransferase enzyme II N-terminus JYA99_RS05380 PF07663 Sorbitol phosphotransferase enzyme II C-terminus JYA99_RS05385 PF03608 PTS system enzyme II sorbitol-specific factor JYA99_RS05390 PF13406 Transglycosylase SLT domain JYA99_RS05395 PF00005 ABC transporter JYA99_RS05400 PF00950 ABC 3 transport family JYA99_RS05405 PF01297 Zinc-uptake complex component A periplasmic JYA99_RS05410 PF02464 Competence-damaged protein JYA99_RS05415 PF00154 recA bacterial DNA recombination protein JYA99_RS05420 PF02631 RecX family JYA99_RS05425 PF01411 tRNA synthetases class II (A) JYA99_RS05425 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JYA99_RS05425 PF02272 DHHA1 domain JYA99_RS05430 PF02599 Global regulator protein family JYA99_RS05465 PF04972 BON domain JYA99_RS05470 PF13419 Haloacid dehalogenase-like hydrolase JYA99_RS05475 PF09335 SNARE associated Golgi protein JYA99_RS05480 PF04262 Glutamate-cysteine ligase JYA99_RS05485 PF02664 S-Ribosylhomocysteinase (LuxS) JYA99_RS05490 PF12833 Helix-turn-helix domain JYA99_RS05490 PF12852 Cupin JYA99_RS05495 PF08502 LeuA allosteric (dimerisation) domain JYA99_RS05495 PF00682 HMGL-like JYA99_RS05500 PF07690 Major Facilitator Superfamily JYA99_RS05505 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JYA99_RS05505 PF00529 HlyD membrane-fusion protein of T1SS JYA99_RS05510 PF01047 MarR family JYA99_RS05515 PF05437 Branched-chain amino acid transport protein (AzlD) JYA99_RS05520 PF03591 AzlC protein JYA99_RS05525 PF04069 Substrate binding domain of ABC-type glycine betaine transport system JYA99_RS05530 PF00528 Binding-protein-dependent transport system inner membrane component JYA99_RS05535 PF00571 CBS domain JYA99_RS05535 PF00005 ABC transporter JYA99_RS05540 PF00268 Ribonucleotide reductase, small chain JYA99_RS05545 PF02867 Ribonucleotide reductase, barrel domain JYA99_RS05545 PF00317 Ribonucleotide reductase, all-alpha domain JYA99_RS05545 PF08343 Ribonucleotide reductase N-terminal JYA99_RS05550 PF07972 NrdI Flavodoxin like JYA99_RS05555 PF00462 Glutaredoxin JYA99_RS05560 PF02627 Carboxymuconolactone decarboxylase family JYA99_RS05565 PF00155 Aminotransferase class I and II JYA99_RS05565 PF00392 Bacterial regulatory proteins, gntR family JYA99_RS05570 PF05957 Bacterial protein of unknown function (DUF883) JYA99_RS05575 PF09400 Protein of unknown function (DUF2002) JYA99_RS05580 PF06610 L-alanine exporter JYA99_RS05585 PF00816 H-NS histone family JYA99_RS05600 PF11127 Protein of unknown function (DUF2892) JYA99_RS05600 PF00581 Rhodanese-like domain JYA99_RS05605 PF01022 Bacterial regulatory protein, arsR family JYA99_RS05610 PF02525 Flavodoxin-like fold JYA99_RS05615 PF03466 LysR substrate binding domain JYA99_RS05615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYA99_RS05620 PF01590 GAF domain JYA99_RS05620 PF00158 Sigma-54 interaction domain JYA99_RS05620 PF02954 Bacterial regulatory protein, Fis family JYA99_RS05625 PF00171 Aldehyde dehydrogenase family JYA99_RS05630 PF16970 Type-1 fimbrial protein, A JYA99_RS05635 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain JYA99_RS05635 PF02753 Pili assembly chaperone PapD, C-terminal domain JYA99_RS05640 PF00577 Outer membrane usher protein JYA99_RS05640 PF13954 PapC N-terminal domain JYA99_RS05640 PF13953 PapC C-terminal domain JYA99_RS05660 PF02753 Pili assembly chaperone PapD, C-terminal domain JYA99_RS05660 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain JYA99_RS05665 PF00419 Fimbrial protein JYA99_RS05670 PF00072 Response regulator receiver domain JYA99_RS05670 PF00196 Bacterial regulatory proteins, luxR family JYA99_RS05685 PF00106 short chain dehydrogenase JYA99_RS05690 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JYA99_RS05695 PF00596 Class II Aldolase and Adducin N-terminal domain JYA99_RS05700 PF00005 ABC transporter JYA99_RS05705 PF00497 Bacterial extracellular solute-binding proteins, family 3 JYA99_RS05720 PF00491 Arginase family JYA99_RS05725 PF03466 LysR substrate binding domain JYA99_RS05725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYA99_RS05735 PF00873 AcrB/AcrD/AcrF family JYA99_RS05740 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JYA99_RS05740 PF00529 HlyD membrane-fusion protein of T1SS JYA99_RS05745 PF12833 Helix-turn-helix domain JYA99_RS05745 PF06445 GyrI-like small molecule binding domain JYA99_RS05755 PF03466 LysR substrate binding domain JYA99_RS05755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYA99_RS05775 PF17345 Family of unknown function (DUF5375) JYA99_RS05800 PF04606 Ogr/Delta-like zinc finger JYA99_RS05835 PF01668 SmpB protein JYA99_RS05840 PF03364 Polyketide cyclase / dehydrase and lipid transport JYA99_RS05845 PF03658 RnfH family Ubiquitin JYA99_RS05850 PF04355 SmpA / OmlA family JYA99_RS05855 PF02463 RecF/RecN/SMC N terminal domain JYA99_RS05860 PF01513 ATP-NAD kinase JYA99_RS05865 PF01025 GrpE JYA99_RS05870 PF00571 CBS domain JYA99_RS05870 PF03471 Transporter associated domain JYA99_RS05870 PF01595 Cyclin M transmembrane N-terminal domain JYA99_RS05875 PF01578 Cytochrome C assembly protein JYA99_RS05880 PF02881 SRP54-type protein, helical bundle domain JYA99_RS05880 PF02978 Signal peptide binding domain JYA99_RS05880 PF00448 SRP54-type protein, GTPase domain JYA99_RS05885 PF00886 Ribosomal protein S16 JYA99_RS05890 PF01782 RimM N-terminal domain JYA99_RS05890 PF05239 PRC-barrel domain JYA99_RS05895 PF01746 tRNA (Guanine-1)-methyltransferase JYA99_RS05900 PF01245 Ribosomal protein L19 JYA99_RS05915 PF00691 OmpA family JYA99_RS05920 PF17152 Periplasmic sensor domain JYA99_RS05920 PF00990 Diguanylate cyclase, GGDEF domain JYA99_RS05925 PF13689 YfiR/HmsC-like JYA99_RS05930 PF00793 DAHP synthetase I family JYA99_RS05935 PF01817 Chorismate mutase type II JYA99_RS05935 PF02153 Prephenate dehydrogenase JYA99_RS05940 PF08450 SMP-30/Gluconolactonase/LRE-like region JYA99_RS05945 PF00800 Prephenate dehydratase JYA99_RS05945 PF01817 Chorismate mutase type II JYA99_RS05955 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein JYA99_RS05960 PF13525 Outer membrane lipoprotein JYA99_RS05965 PF01479 S4 domain JYA99_RS05965 PF00849 RNA pseudouridylate synthase JYA99_RS05970 PF02578 Multi-copper polyphenol oxidoreductase laccase JYA99_RS05975 PF10431 C-terminal, D2-small domain, of ClpB protein JYA99_RS05975 PF00004 ATPase family associated with various cellular activities (AAA) JYA99_RS05975 PF07724 AAA domain (Cdc48 subfamily) JYA99_RS05975 PF17871 AAA lid domain JYA99_RS05975 PF02861 Clp amino terminal domain, pathogenicity island component JYA99_RS06000 PF00083 Sugar (and other) transporter JYA99_RS06005 PF10043 Predicted periplasmic lipoprotein (DUF2279) JYA99_RS06010 PF13091 PLD-like domain JYA99_RS06015 PF13380 CoA binding domain JYA99_RS06015 PF00583 Acetyltransferase (GNAT) family JYA99_RS06015 PF13607 Succinyl-CoA ligase like flavodoxin domain JYA99_RS06020 PF03942 DTW domain JYA99_RS06025 PF00085 Thioredoxin JYA99_RS06030 PF00588 SpoU rRNA Methylase family JYA99_RS06030 PF08032 RNA 2'-O ribose methyltransferase substrate binding JYA99_RS06035 PF03167 Uracil DNA glycosylase superfamily JYA99_RS06040 PF01228 Glycine radical JYA99_RS06045 PF00271 Helicase conserved C-terminal domain JYA99_RS06045 PF00270 DEAD/DEAH box helicase JYA99_RS06050 PF05175 Methyltransferase small domain JYA99_RS06055 PF02910 Fumarate reductase flavoprotein C-term JYA99_RS06055 PF00890 FAD binding domain JYA99_RS06065 PF08281 Sigma-70, region 4 JYA99_RS06065 PF04542 Sigma-70 region 2 JYA99_RS06070 PF03872 Anti sigma-E protein RseA, N-terminal domain JYA99_RS06070 PF03873 Anti sigma-E protein RseA, C-terminal domain JYA99_RS06075 PF03888 MucB/RseB N-terminal domain JYA99_RS06075 PF17188 MucB/RseB C-terminal domain JYA99_RS06085 PF06421 GTP-binding protein LepA C-terminus JYA99_RS06085 PF00679 Elongation factor G C-terminus JYA99_RS06085 PF03144 Elongation factor Tu domain 2 JYA99_RS06085 PF00009 Elongation factor Tu GTP binding domain JYA99_RS06090 PF10502 Signal peptidase, peptidase S26 JYA99_RS06095 PF14622 Ribonuclease-III-like JYA99_RS06095 PF00035 Double-stranded RNA binding motif JYA99_RS06100 PF07650 KH domain JYA99_RS06100 PF01926 50S ribosome-binding GTPase JYA99_RS06105 PF11967 Recombination protein O N terminal JYA99_RS06105 PF02565 Recombination protein O C terminal JYA99_RS06110 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ JYA99_RS06115 PF01648 4'-phosphopantetheinyl transferase superfamily JYA99_RS06120 PF12838 4Fe-4S dicluster domain JYA99_RS06125 PF01380 SIS domain JYA99_RS06125 PF01418 Helix-turn-helix domain, rpiR family JYA99_RS06135 PF14437 MafB19-like deaminase JYA99_RS06140 PF00497 Bacterial extracellular solute-binding proteins, family 3 JYA99_RS06140 PF01464 Transglycosylase SLT domain JYA99_RS06145 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain JYA99_RS06145 PF02769 AIR synthase related protein, C-terminal domain JYA99_RS06145 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal JYA99_RS06150 PF00512 His Kinase A (phospho-acceptor) domain JYA99_RS06150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYA99_RS06155 PF13942 YfhG lipoprotein JYA99_RS06160 PF00158 Sigma-54 interaction domain JYA99_RS06160 PF00072 Response regulator receiver domain JYA99_RS06165 PF00543 Nitrogen regulatory protein P-II JYA99_RS06170 PF00175 Oxidoreductase NAD-binding domain JYA99_RS06170 PF00042 Globin JYA99_RS06170 PF00970 Oxidoreductase FAD-binding domain JYA99_RS06175 PF00464 Serine hydroxymethyltransferase JYA99_RS06180 PF07681 DoxX JYA99_RS06185 PF00480 ROK family JYA99_RS06190 PF13181 Tetratricopeptide repeat JYA99_RS06190 PF17128 Domain of unknown function (DUF5107) JYA99_RS06195 PF00083 Sugar (and other) transporter JYA99_RS06200 PF01263 Aldose 1-epimerase JYA99_RS06205 PF12832 MFS_1 like family JYA99_RS06210 PF00874 PRD domain JYA99_RS06215 PF06226 Protein of unknown function (DUF1007) JYA99_RS06220 PF03824 High-affinity nickel-transport protein JYA99_RS06230 PF00459 Inositol monophosphatase family JYA99_RS06235 PF00588 SpoU rRNA Methylase family JYA99_RS06240 PF02082 Transcriptional regulator JYA99_RS06245 PF00266 Aminotransferase class-V JYA99_RS06250 PF01592 NifU-like N terminal domain JYA99_RS06255 PF01521 Iron-sulphur cluster biosynthesis JYA99_RS06260 PF00226 DnaJ domain JYA99_RS06260 PF07743 HSCB C-terminal oligomerisation domain JYA99_RS06265 PF00012 Hsp70 protein JYA99_RS06270 PF00111 2Fe-2S iron-sulfur cluster binding domain JYA99_RS06275 PF04384 Iron-sulphur cluster assembly JYA99_RS06280 PF00883 Cytosol aminopeptidase family, catalytic domain JYA99_RS06280 PF12404 Peptidase JYA99_RS06285 PF14581 SseB protein C-terminal domain JYA99_RS06285 PF07179 SseB protein N-terminal domain JYA99_RS06295 PF00581 Rhodanese-like domain JYA99_RS06300 PF07678 A-macroglobulin TED domain JYA99_RS06300 PF00207 Alpha-2-macroglobulin family JYA99_RS06300 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain JYA99_RS06300 PF17962 Bacterial macroglobulin domain 6 JYA99_RS06300 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain JYA99_RS06300 PF01835 MG2 domain JYA99_RS06300 PF07703 Alpha-2-macroglobulin bait region domain JYA99_RS06300 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain JYA99_RS06300 PF11974 Bacterial alpha-2-macroglobulin MG3 domain JYA99_RS06305 PF06832 Penicillin-Binding Protein C-terminus Family JYA99_RS06305 PF00912 Transglycosylase JYA99_RS06305 PF00905 Penicillin binding protein transpeptidase domain JYA99_RS06310 PF00334 Nucleoside diphosphate kinase JYA99_RS06315 PF04055 Radical SAM superfamily JYA99_RS06320 PF13464 Domain of unknown function (DUF4115) JYA99_RS06325 PF04551 GcpE protein JYA99_RS06330 PF13393 Histidyl-tRNA synthetase JYA99_RS06330 PF03129 Anticodon binding domain JYA99_RS06335 PF09976 Tetratricopeptide repeat-like domain JYA99_RS06340 PF13360 PQQ-like domain JYA99_RS06345 PF01926 50S ribosome-binding GTPase JYA99_RS06345 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal JYA99_RS06365 PF07191 zinc-ribbons JYA99_RS06370 PF13742 OB-fold nucleic acid binding domain JYA99_RS06370 PF02601 Exonuclease VII, large subunit JYA99_RS06375 PF00478 IMP dehydrogenase / GMP reductase domain JYA99_RS06375 PF00571 CBS domain JYA99_RS06380 PF00958 GMP synthase C terminal domain JYA99_RS06380 PF00117 Glutamine amidotransferase class-I JYA99_RS06380 PF02540 NAD synthase JYA99_RS06385 PF00884 Sulfatase JYA99_RS06390 PF04055 Radical SAM superfamily JYA99_RS06390 PF13186 Iron-sulfur cluster-binding domain JYA99_RS06400 PF03466 LysR substrate binding domain JYA99_RS06400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYA99_RS06405 PF11119 Protein of unknown function (DUF2633) JYA99_RS06410 PF05231 MASE1 JYA99_RS06410 PF00563 EAL domain JYA99_RS06415 PF02541 Ppx/GppA phosphatase family JYA99_RS06420 PF13089 Polyphosphate kinase N-terminal domain JYA99_RS06420 PF17941 Polyphosphate kinase C-terminal domain 1 JYA99_RS06420 PF13090 Polyphosphate kinase C-terminal domain 2 JYA99_RS06420 PF02503 Polyphosphate kinase middle domain JYA99_RS06425 PF00551 Formyl transferase JYA99_RS06430 PF00586 AIR synthase related protein, N-terminal domain JYA99_RS06430 PF02769 AIR synthase related protein, C-terminal domain JYA99_RS06435 PF00480 ROK family JYA99_RS06440 PF00232 Glycosyl hydrolase family 1 JYA99_RS06450 PF00860 Permease family JYA99_RS06460 PF04754 Putative transposase, YhgA-like JYA99_RS06465 PF03960 ArsC family JYA99_RS06470 PF01435 Peptidase family M48 JYA99_RS06480 PF01594 AI-2E family transporter JYA99_RS06485 PF00578 AhpC/TSA family JYA99_RS06490 PF01842 ACT domain JYA99_RS06495 PF00701 Dihydrodipicolinate synthetase family JYA99_RS06500 PF06804 NlpB/DapX lipoprotein JYA99_RS06505 PF01259 SAICAR synthetase JYA99_RS06510 PF04228 Putative neutral zinc metallopeptidase JYA99_RS06515 PF17176 tRNA-binding domain JYA99_RS06515 PF05127 Helicase JYA99_RS06515 PF13718 GNAT acetyltransferase 2 JYA99_RS06515 PF08351 Domain of unknown function (DUF1726) JYA99_RS06520 PF02230 Phospholipase/Carboxylesterase JYA99_RS06525 PF13980 Uncharacterised protein family (UPF0370) JYA99_RS06530 PF01546 Peptidase family M20/M25/M40 JYA99_RS06530 PF07687 Peptidase dimerisation domain JYA99_RS06535 PF03960 ArsC family JYA99_RS06545 PF00873 AcrB/AcrD/AcrF family JYA99_RS06550 PF13247 4Fe-4S dicluster domain JYA99_RS06550 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster JYA99_RS06550 PF07992 Pyridine nucleotide-disulphide oxidoreductase JYA99_RS06555 PF00293 NUDIX domain JYA99_RS06560 PF06674 Protein of unknown function (DUF1176) JYA99_RS06565 PF00456 Transketolase, thiamine diphosphate binding domain JYA99_RS06565 PF02779 Transketolase, pyrimidine binding domain JYA99_RS06565 PF02780 Transketolase, C-terminal domain JYA99_RS06570 PF00923 Transaldolase/Fructose-6-phosphate aldolase JYA99_RS06575 PF01515 Phosphate acetyl/butaryl transferase JYA99_RS06575 PF00390 Malic enzyme, N-terminal domain JYA99_RS06575 PF03949 Malic enzyme, NAD binding domain JYA99_RS06580 PF00936 BMC domain JYA99_RS06585 PF10662 Ethanolamine utilisation - propanediol utilisation JYA99_RS06590 PF06249 Ethanolamine utilisation protein EutQ JYA99_RS06595 PF01923 Cobalamin adenosyltransferase JYA99_RS06600 PF01515 Phosphate acetyl/butaryl transferase JYA99_RS06605 PF00936 BMC domain JYA99_RS06610 PF03319 Ethanolamine utilisation protein EutN/carboxysome JYA99_RS06615 PF00171 Aldehyde dehydrogenase family JYA99_RS06625 PF00465 Iron-containing alcohol dehydrogenase JYA99_RS06630 PF04346 Ethanolamine utilisation protein, EutH JYA99_RS06635 PF06277 Ethanolamine utilisation protein EutA JYA99_RS06640 PF06751 Ethanolamine ammonia lyase large subunit (EutB) JYA99_RS06645 PF05985 Ethanolamine ammonia-lyase light chain (EutC) JYA99_RS06650 PF00936 BMC domain JYA99_RS06655 PF00936 BMC domain JYA99_RS06655 PF16365 Ethanolamine utilization protein EutK C-terminus JYA99_RS06660 PF12833 Helix-turn-helix domain JYA99_RS06665 PF01218 Coproporphyrinogen III oxidase JYA99_RS06670 PF01520 N-acetylmuramoyl-L-alanine amidase JYA99_RS06675 PF00583 Acetyltransferase (GNAT) family JYA99_RS06680 PF11143 Protein of unknown function (DUF2919) JYA99_RS06685 PF06572 Protein of unknown function (DUF1131) JYA99_RS06690 PF04261 Dyp-type peroxidase family JYA99_RS06705 PF00528 Binding-protein-dependent transport system inner membrane component JYA99_RS06710 PF00528 Binding-protein-dependent transport system inner membrane component JYA99_RS06715 PF00005 ABC transporter JYA99_RS06720 PF00291 Pyridoxal-phosphate dependent enzyme JYA99_RS06725 PF13474 SnoaL-like domain JYA99_RS06730 PF00155 Aminotransferase class I and II JYA99_RS06730 PF00392 Bacterial regulatory proteins, gntR family JYA99_RS06735 PF08543 Phosphomethylpyrimidine kinase JYA99_RS06745 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JYA99_RS06750 PF00391 PEP-utilising enzyme, mobile domain JYA99_RS06750 PF02896 PEP-utilising enzyme, TIM barrel domain JYA99_RS06750 PF05524 PEP-utilising enzyme, N-terminal JYA99_RS06755 PF00381 PTS HPr component phosphorylation site JYA99_RS06760 PF00291 Pyridoxal-phosphate dependent enzyme JYA99_RS06770 PF04354 ZipA, C-terminal FtsZ-binding domain JYA99_RS06775 PF12826 Helix-hairpin-helix motif JYA99_RS06775 PF00533 BRCA1 C Terminus (BRCT) domain JYA99_RS06775 PF01653 NAD-dependent DNA ligase adenylation domain JYA99_RS06775 PF03120 NAD-dependent DNA ligase OB-fold domain JYA99_RS06775 PF03119 NAD-dependent DNA ligase C4 zinc finger domain JYA99_RS06780 PF12843 Putative quorum-sensing-regulated virulence factor JYA99_RS06785 PF13593 SBF-like CPA transporter family (DUF4137) JYA99_RS06790 PF03466 LysR substrate binding domain JYA99_RS06790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYA99_RS06820 PF00749 tRNA synthetases class I (E and Q), catalytic domain JYA99_RS06825 PF07037 Putative transcription regulator (DUF1323) JYA99_RS06830 PF07037 Putative transcription regulator (DUF1323) JYA99_RS06845 PF05231 MASE1 JYA99_RS06845 PF00563 EAL domain JYA99_RS06850 PF07670 Nucleoside recognition JYA99_RS06850 PF07662 Na+ dependent nucleoside transporter C-terminus JYA99_RS06850 PF01773 Na+ dependent nucleoside transporter N-terminus JYA99_RS06855 PF01566 Natural resistance-associated macrophage protein JYA99_RS06860 PF10697 Protein of unknown function (DUF2502) JYA99_RS06865 PF00248 Aldo/keto reductase family JYA99_RS06870 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JYA99_RS06870 PF00205 Thiamine pyrophosphate enzyme, central domain JYA99_RS06870 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JYA99_RS06875 PF00654 Voltage gated chloride channel JYA99_RS06880 PF02685 Glucokinase JYA99_RS06885 PF04397 LytTr DNA-binding domain JYA99_RS06885 PF00072 Response regulator receiver domain JYA99_RS06890 PF07694 5TMR of 5TMR-LYT JYA99_RS06890 PF06580 Histidine kinase JYA99_RS06890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYA99_RS06905 PF00155 Aminotransferase class I and II JYA99_RS06915 PF07690 Major Facilitator Superfamily JYA99_RS06920 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JYA99_RS06925 PF03466 LysR substrate binding domain JYA99_RS06925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYA99_RS06945 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath JYA99_RS06960 PF13488 Glycine zipper JYA99_RS06960 PF00691 OmpA family JYA99_RS06975 PF13296 Putative type VI secretion system Rhs element Vgr JYA99_RS06975 PF04717 Type VI secretion system, phage-baseplate injector JYA99_RS06975 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) JYA99_RS06990 PF13457 GW (Gly-Tryp) dipeptide domain JYA99_RS06990 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase JYA99_RS07045 PF04717 Type VI secretion system, phage-baseplate injector JYA99_RS07080 PF01226 Formate/nitrite transporter JYA99_RS07085 PF04333 MlaA lipoprotein JYA99_RS07090 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) JYA99_RS07095 PF04175 Protein of unknown function (DUF406) JYA99_RS07100 PF02803 Thiolase, C-terminal domain JYA99_RS07100 PF00108 Thiolase, N-terminal domain JYA99_RS07105 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JYA99_RS07105 PF00378 Enoyl-CoA hydratase/isomerase JYA99_RS07105 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JYA99_RS07110 PF00300 Histidine phosphatase superfamily (branch 1) JYA99_RS07115 PF01713 Smr domain JYA99_RS07120 PF05175 Methyltransferase small domain JYA99_RS07125 PF01264 Chorismate synthase JYA99_RS07130 PF03411 Penicillin-insensitive murein endopeptidase JYA99_RS07135 PF01925 Sulfite exporter TauE/SafE JYA99_RS07140 PF04315 Elongation factor P hydroxylase JYA99_RS07145 PF08891 YfcL protein JYA99_RS07150 PF01266 FAD dependent oxidoreductase JYA99_RS07150 PF05430 S-adenosyl-L-methionine-dependent methyltransferase JYA99_RS07155 PF00109 Beta-ketoacyl synthase, N-terminal domain JYA99_RS07155 PF02801 Beta-ketoacyl synthase, C-terminal domain JYA99_RS07160 PF07690 Major Facilitator Superfamily JYA99_RS07170 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JYA99_RS07170 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JYA99_RS07170 PF11890 Domain of unknown function (DUF3410) JYA99_RS07175 PF02774 Semialdehyde dehydrogenase, dimerisation domain JYA99_RS07175 PF01118 Semialdehyde dehydrogenase, NAD binding domain JYA99_RS07180 PF01416 tRNA pseudouridine synthase JYA99_RS07185 PF09335 SNARE associated Golgi protein JYA99_RS07190 PF17848 Acetyl-coA carboxylase zinc finger domain JYA99_RS07190 PF01039 Carboxyl transferase domain JYA99_RS07195 PF02875 Mur ligase family, glutamate ligase domain JYA99_RS07195 PF08245 Mur ligase middle domain JYA99_RS07200 PF05036 Sporulation related domain JYA99_RS07205 PF02674 Colicin V production protein JYA99_RS07210 PF00156 Phosphoribosyl transferase domain JYA99_RS07215 PF02441 Flavoprotein JYA99_RS07225 PF00497 Bacterial extracellular solute-binding proteins, family 3 JYA99_RS07230 PF00497 Bacterial extracellular solute-binding proteins, family 3 JYA99_RS07235 PF00528 Binding-protein-dependent transport system inner membrane component JYA99_RS07240 PF00528 Binding-protein-dependent transport system inner membrane component JYA99_RS07245 PF00005 ABC transporter JYA99_RS07250 PF13302 Acetyltransferase (GNAT) domain JYA99_RS07260 PF01370 NAD dependent epimerase/dehydratase family JYA99_RS07260 PF08338 Domain of unknown function (DUF1731) JYA99_RS07265 PF02152 Dihydroneopterin aldolase JYA99_RS07270 PF00043 Glutathione S-transferase, C-terminal domain JYA99_RS07270 PF02798 Glutathione S-transferase, N-terminal domain JYA99_RS07280 PF12850 Calcineurin-like phosphoesterase superfamily domain JYA99_RS07285 PF00293 NUDIX domain JYA99_RS07290 PF01515 Phosphate acetyl/butaryl transferase JYA99_RS07290 PF07085 DRTGG domain JYA99_RS07295 PF00871 Acetokinase family JYA99_RS07300 PF04217 Protein of unknown function, DUF412 JYA99_RS07305 PF03887 YfbU domain JYA99_RS07310 PF13419 Haloacid dehalogenase-like hydrolase JYA99_RS07315 PF02080 TrkA-C domain JYA99_RS07315 PF03600 Citrate transporter JYA99_RS07325 PF00155 Aminotransferase class I and II JYA99_RS07330 PF03466 LysR substrate binding domain JYA99_RS07330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYA99_RS07335 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 JYA99_RS07340 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit JYA99_RS07345 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit JYA99_RS07345 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit JYA99_RS07355 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region JYA99_RS07355 PF10531 SLBB domain JYA99_RS07355 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit JYA99_RS07360 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JYA99_RS07360 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region JYA99_RS07360 PF00384 Molybdopterin oxidoreductase JYA99_RS07360 PF01568 Molydopterin dinucleotide binding domain JYA99_RS07365 PF00146 NADH dehydrogenase JYA99_RS07370 PF12838 4Fe-4S dicluster domain JYA99_RS07375 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 JYA99_RS07380 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L JYA99_RS07385 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus JYA99_RS07385 PF00361 Proton-conducting membrane transporter JYA99_RS07390 PF00361 Proton-conducting membrane transporter JYA99_RS07395 PF00361 Proton-conducting membrane transporter JYA99_RS07400 PF12706 Beta-lactamase superfamily domain JYA99_RS07405 PF13673 Acetyltransferase (GNAT) domain JYA99_RS07410 PF00425 chorismate binding enzyme JYA99_RS07415 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JYA99_RS07415 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JYA99_RS07415 PF16582 Middle domain of thiamine pyrophosphate JYA99_RS07420 PF12697 Alpha/beta hydrolase family JYA99_RS07425 PF00378 Enoyl-CoA hydratase/isomerase JYA99_RS07430 PF13378 Enolase C-terminal domain-like JYA99_RS07435 PF00501 AMP-binding enzyme JYA99_RS07435 PF13193 AMP-binding enzyme C-terminal domain JYA99_RS07440 PF00293 NUDIX domain JYA99_RS07445 PF04754 Putative transposase, YhgA-like JYA99_RS07450 PF07437 YfaZ precursor JYA99_RS07455 PF00994 Probable molybdopterin binding domain JYA99_RS07460 PF01614 Bacterial transcriptional regulator JYA99_RS07460 PF09339 IclR helix-turn-helix domain JYA99_RS07465 PF13378 Enolase C-terminal domain-like JYA99_RS07465 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JYA99_RS07470 PF07690 Major Facilitator Superfamily JYA99_RS07475 PF03328 HpcH/HpaI aldolase/citrate lyase family JYA99_RS07480 PF02754 Cysteine-rich domain JYA99_RS07480 PF13183 4Fe-4S dicluster domain JYA99_RS07485 PF00890 FAD binding domain JYA99_RS07490 PF04324 BFD-like [2Fe-2S] binding domain JYA99_RS07490 PF01266 FAD dependent oxidoreductase JYA99_RS07495 PF07690 Major Facilitator Superfamily JYA99_RS07500 PF03009 Glycerophosphoryl diester phosphodiesterase family JYA99_RS07505 PF00111 2Fe-2S iron-sulfur cluster binding domain JYA99_RS07510 PF00268 Ribonucleotide reductase, small chain JYA99_RS07515 PF02867 Ribonucleotide reductase, barrel domain JYA99_RS07515 PF03477 ATP cone domain JYA99_RS07515 PF00317 Ribonucleotide reductase, all-alpha domain JYA99_RS07525 PF03989 DNA gyrase C-terminal domain, beta-propeller JYA99_RS07525 PF00521 DNA gyrase/topoisomerase IV, subunit A JYA99_RS07530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYA99_RS07530 PF00512 His Kinase A (phospho-acceptor) domain JYA99_RS07530 PF09456 RcsC Alpha-Beta-Loop (ABL) JYA99_RS07530 PF00072 Response regulator receiver domain JYA99_RS07535 PF00072 Response regulator receiver domain JYA99_RS07535 PF00196 Bacterial regulatory proteins, luxR family JYA99_RS07540 PF01627 Hpt domain JYA99_RS07540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYA99_RS07540 PF16359 RcsD-ABL domain JYA99_RS07545 PF00267 Gram-negative porin JYA99_RS07550 PF02424 ApbE family JYA99_RS07555 PF02805 Metal binding domain of Ada JYA99_RS07555 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain JYA99_RS07555 PF12833 Helix-turn-helix domain JYA99_RS07555 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain JYA99_RS07560 PF13532 2OG-Fe(II) oxygenase superfamily JYA99_RS07565 PF00005 ABC transporter JYA99_RS07570 PF03448 MgtE intracellular N domain JYA99_RS07570 PF01769 Divalent cation transporter JYA99_RS07570 PF00571 CBS domain JYA99_RS07575 PF01740 STAS domain JYA99_RS07575 PF00916 Sulfate permease family JYA99_RS07580 PF06039 Malate:quinone oxidoreductase (Mqo) JYA99_RS07585 PF03974 Ecotin JYA99_RS07590 PF01594 AI-2E family transporter JYA99_RS07600 PF11893 Domain of unknown function (DUF3413) JYA99_RS07600 PF00884 Sulfatase JYA99_RS07605 PF07208 Protein of unknown function (DUF1414) JYA99_RS07610 PF04245 37-kD nucleoid-associated bacterial protein JYA99_RS07615 PF00455 DeoR C terminal sensor domain JYA99_RS07615 PF08220 DeoR-like helix-turn-helix domain JYA99_RS07620 PF00293 NUDIX domain JYA99_RS07625 PF00144 Beta-lactamase JYA99_RS07635 PF01386 Ribosomal L25p family JYA99_RS07640 PF04851 Type III restriction enzyme, res subunit JYA99_RS07640 PF00271 Helicase conserved C-terminal domain JYA99_RS07645 PF01479 S4 domain JYA99_RS07645 PF00849 RNA pseudouridylate synthase JYA99_RS07650 PF07690 Major Facilitator Superfamily JYA99_RS07655 PF13989 YejG-like protein JYA99_RS07660 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JYA99_RS07660 PF00005 ABC transporter JYA99_RS07665 PF00528 Binding-protein-dependent transport system inner membrane component JYA99_RS07665 PF12911 N-terminal TM domain of oligopeptide transport permease C JYA99_RS07670 PF00528 Binding-protein-dependent transport system inner membrane component JYA99_RS07675 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JYA99_RS07680 PF00563 EAL domain JYA99_RS07680 PF12792 CSS motif domain associated with EAL JYA99_RS07685 PF00877 NlpC/P60 family JYA99_RS07690 PF01569 PAP2 superfamily JYA99_RS07695 PF07683 Cobalamin synthesis protein cobW C-terminal domain JYA99_RS07695 PF02492 CobW/HypB/UreG, nucleotide-binding domain JYA99_RS07700 PF01232 Mannitol dehydrogenase Rossmann domain JYA99_RS07700 PF08125 Mannitol dehydrogenase C-terminal domain JYA99_RS07705 PF03786 D-mannonate dehydratase (UxuA) JYA99_RS07710 PF01132 Elongation factor P (EF-P) OB domain JYA99_RS07710 PF09285 Elongation factor P, C-terminal JYA99_RS07710 PF08207 Elongation factor P (EF-P) KOW-like domain JYA99_RS07715 PF03692 Putative zinc- or iron-chelating domain JYA99_RS07720 PF07690 Major Facilitator Superfamily JYA99_RS07725 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JYA99_RS07725 PF00381 PTS HPr component phosphorylation site JYA99_RS07730 PF00294 pfkB family carbohydrate kinase JYA99_RS07735 PF02378 Phosphotransferase system, EIIC JYA99_RS07735 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JYA99_RS07740 PF01261 Xylose isomerase-like TIM barrel JYA99_RS07745 PF03601 Conserved hypothetical protein 698 JYA99_RS07750 PF03466 LysR substrate binding domain JYA99_RS07750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYA99_RS07755 PF00324 Amino acid permease JYA99_RS07760 PF07715 TonB-dependent Receptor Plug Domain JYA99_RS07760 PF00593 TonB dependent receptor JYA99_RS07765 PF00756 Putative esterase JYA99_RS07770 PF01227 GTP cyclohydrolase I JYA99_RS07775 PF04235 Protein of unknown function (DUF418) JYA99_RS07780 PF00356 Bacterial regulatory proteins, lacI family JYA99_RS07785 PF13407 Periplasmic binding protein domain JYA99_RS07790 PF00005 ABC transporter JYA99_RS07795 PF02653 Branched-chain amino acid transport system / permease component JYA99_RS07800 PF02698 DUF218 domain JYA99_RS07805 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JYA99_RS07805 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region JYA99_RS07810 PF04172 LrgB-like family JYA99_RS07815 PF03788 LrgA family JYA99_RS07820 PF01207 Dihydrouridine synthase (Dus) JYA99_RS07825 PF04966 Carbohydrate-selective porin, OprB family JYA99_RS07830 PF00874 PRD domain JYA99_RS07830 PF03123 CAT RNA binding domain JYA99_RS07835 PF02378 Phosphotransferase system, EIIC JYA99_RS07835 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JYA99_RS07835 PF00367 phosphotransferase system, EIIB JYA99_RS07840 PF00232 Glycosyl hydrolase family 1 JYA99_RS07845 PF02321 Outer membrane efflux protein JYA99_RS07850 PF09335 SNARE associated Golgi protein JYA99_RS07855 PF04893 Yip1 domain JYA99_RS07860 PF00768 D-alanyl-D-alanine carboxypeptidase JYA99_RS07870 PF09330 D-lactate dehydrogenase, membrane binding JYA99_RS07870 PF01565 FAD binding domain JYA99_RS07875 PF00933 Glycosyl hydrolase family 3 N terminal domain JYA99_RS07875 PF01915 Glycosyl hydrolase family 3 C-terminal domain JYA99_RS07875 PF14310 Fibronectin type III-like domain JYA99_RS07880 PF04069 Substrate binding domain of ABC-type glycine betaine transport system JYA99_RS07885 PF00528 Binding-protein-dependent transport system inner membrane component JYA99_RS07890 PF00005 ABC transporter JYA99_RS07895 PF00528 Binding-protein-dependent transport system inner membrane component JYA99_RS07905 PF07694 5TMR of 5TMR-LYT JYA99_RS07905 PF06580 Histidine kinase JYA99_RS07910 PF00072 Response regulator receiver domain JYA99_RS07910 PF04397 LytTr DNA-binding domain JYA99_RS07915 PF07308 Protein of unknown function (DUF1456) JYA99_RS07920 PF09334 tRNA synthetases class I (M) JYA99_RS07920 PF01588 Putative tRNA binding domain JYA99_RS07925 PF10609 NUBPL iron-transfer P-loop NTPase JYA99_RS07935 PF11776 Nickel/cobalt transporter regulator JYA99_RS07940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYA99_RS07940 PF03466 LysR substrate binding domain JYA99_RS07945 PF00860 Permease family JYA99_RS07950 PF13382 Adenine deaminase C-terminal domain JYA99_RS07950 PF01979 Amidohydrolase family JYA99_RS07955 PF03466 LysR substrate binding domain JYA99_RS07955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYA99_RS07965 PF02110 Hydroxyethylthiazole kinase family JYA99_RS07970 PF08543 Phosphomethylpyrimidine kinase JYA99_RS07975 PF01791 DeoC/LacD family aldolase JYA99_RS07980 PF07690 Major Facilitator Superfamily JYA99_RS07985 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JYA99_RS07985 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JYA99_RS07990 PF00106 short chain dehydrogenase JYA99_RS07995 PF00356 Bacterial regulatory proteins, lacI family JYA99_RS08000 PF04198 Putative sugar-binding domain JYA99_RS08005 PF08125 Mannitol dehydrogenase C-terminal domain JYA99_RS08005 PF01232 Mannitol dehydrogenase Rossmann domain JYA99_RS08010 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JYA99_RS08010 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JYA99_RS08015 PF07690 Major Facilitator Superfamily JYA99_RS08020 PF13419 Haloacid dehalogenase-like hydrolase JYA99_RS08025 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JYA99_RS08025 PF13378 Enolase C-terminal domain-like JYA99_RS08030 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JYA99_RS08035 PF00528 Binding-protein-dependent transport system inner membrane component JYA99_RS08040 PF00528 Binding-protein-dependent transport system inner membrane component JYA99_RS08040 PF12911 N-terminal TM domain of oligopeptide transport permease C JYA99_RS08045 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JYA99_RS08045 PF00005 ABC transporter JYA99_RS08050 PF00005 ABC transporter JYA99_RS08050 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JYA99_RS08055 PF00781 Diacylglycerol kinase catalytic domain JYA99_RS08060 PF01136 Peptidase family U32 JYA99_RS08060 PF16325 Peptidase family U32 C-terminal domain JYA99_RS08065 PF00072 Response regulator receiver domain JYA99_RS08065 PF00486 Transcriptional regulatory protein, C terminal JYA99_RS08070 PF00512 His Kinase A (phospho-acceptor) domain JYA99_RS08070 PF00672 HAMP domain JYA99_RS08070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYA99_RS08075 PF07690 Major Facilitator Superfamily JYA99_RS08080 PF00873 AcrB/AcrD/AcrF family JYA99_RS08085 PF00873 AcrB/AcrD/AcrF family JYA99_RS08090 PF13533 Biotin-lipoyl like JYA99_RS08095 PF00375 Sodium:dicarboxylate symporter family JYA99_RS08110 PF00072 Response regulator receiver domain JYA99_RS08110 PF00486 Transcriptional regulatory protein, C terminal JYA99_RS08115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYA99_RS08115 PF00512 His Kinase A (phospho-acceptor) domain JYA99_RS08115 PF13426 PAS domain JYA99_RS08115 PF00672 HAMP domain JYA99_RS08120 PF00012 Hsp70 protein JYA99_RS08125 PF00730 HhH-GPD superfamily base excision DNA repair protein JYA99_RS08125 PF06029 AlkA N-terminal domain JYA99_RS08130 PF00485 Phosphoribulokinase / Uridine kinase family JYA99_RS08135 PF00692 dUTPase JYA99_RS08140 PF05170 AsmA family JYA99_RS08145 PF03741 Integral membrane protein TerC family JYA99_RS08145 PF00571 CBS domain JYA99_RS08145 PF03471 Transporter associated domain JYA99_RS08150 PF00483 Nucleotidyl transferase JYA99_RS08155 PF01569 PAP2 superfamily JYA99_RS08165 PF14052 Capsule assembly protein Wzi JYA99_RS08170 PF18412 Outer-membrane lipoprotein Wza C-terminal domain JYA99_RS08170 PF02563 Polysaccharide biosynthesis/export protein JYA99_RS08170 PF10531 SLBB domain JYA99_RS08175 PF01451 Low molecular weight phosphotyrosine protein phosphatase JYA99_RS08180 PF13807 G-rich domain on putative tyrosine kinase JYA99_RS08180 PF13614 AAA domain JYA99_RS08180 PF02706 Chain length determinant protein JYA99_RS08185 PF02397 Bacterial sugar transferase JYA99_RS08195 PF00534 Glycosyl transferases group 1 JYA99_RS08215 PF01168 Alanine racemase, N-terminal domain JYA99_RS08215 PF01757 Acyltransferase family JYA99_RS08215 PF00842 Alanine racemase, C-terminal domain JYA99_RS08220 PF00534 Glycosyl transferases group 1 JYA99_RS08220 PF13439 Glycosyltransferase Family 4 JYA99_RS08225 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JYA99_RS08225 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain JYA99_RS08230 PF00483 Nucleotidyl transferase JYA99_RS08230 PF01050 Mannose-6-phosphate isomerase JYA99_RS08235 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JYA99_RS08235 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JYA99_RS08235 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JYA99_RS08235 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JYA99_RS08240 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JYA99_RS08240 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JYA99_RS08240 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JYA99_RS08245 PF01370 NAD dependent epimerase/dehydratase family JYA99_RS08260 PF00483 Nucleotidyl transferase JYA99_RS08260 PF01050 Mannose-6-phosphate isomerase JYA99_RS08265 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JYA99_RS08265 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JYA99_RS08265 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JYA99_RS08265 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JYA99_RS08275 PF00005 ABC transporter JYA99_RS08280 PF00069 Protein kinase domain JYA99_RS08280 PF13847 Methyltransferase domain JYA99_RS08285 PF00534 Glycosyl transferases group 1 JYA99_RS08285 PF13439 Glycosyltransferase Family 4 JYA99_RS08290 PF00862 Sucrose synthase JYA99_RS08290 PF00534 Glycosyl transferases group 1 JYA99_RS08300 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase JYA99_RS08300 PF01502 Phosphoribosyl-AMP cyclohydrolase JYA99_RS08305 PF00977 Histidine biosynthesis protein JYA99_RS08310 PF00977 Histidine biosynthesis protein JYA99_RS08315 PF00117 Glutamine amidotransferase class-I JYA99_RS08320 PF08645 Polynucleotide kinase 3 phosphatase JYA99_RS08320 PF00475 Imidazoleglycerol-phosphate dehydratase JYA99_RS08325 PF00155 Aminotransferase class I and II JYA99_RS08330 PF00815 Histidinol dehydrogenase JYA99_RS08335 PF01634 ATP phosphoribosyltransferase JYA99_RS08335 PF08029 HisG, C-terminal domain JYA99_RS08345 PF01370 NAD dependent epimerase/dehydratase family JYA99_RS08350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYA99_RS08350 PF03466 LysR substrate binding domain JYA99_RS08360 PF13520 Amino acid permease JYA99_RS08365 PF01022 Bacterial regulatory protein, arsR family JYA99_RS08370 PF03144 Elongation factor Tu domain 2 JYA99_RS08370 PF00009 Elongation factor Tu GTP binding domain JYA99_RS08370 PF03764 Elongation factor G, domain IV JYA99_RS08370 PF14492 Elongation Factor G, domain II JYA99_RS08370 PF00679 Elongation factor G C-terminus JYA99_RS08375 PF00929 Exonuclease JYA99_RS08375 PF08411 Exonuclease C-terminal JYA99_RS08380 PF07943 Penicillin-binding protein 5, C-terminal domain JYA99_RS08380 PF00768 D-alanyl-D-alanine carboxypeptidase JYA99_RS08385 PF06445 GyrI-like small molecule binding domain JYA99_RS08390 PF04632 Fusaric acid resistance protein family JYA99_RS08395 PF04363 Protein of unknown function (DUF496) JYA99_RS08400 PF02654 Cobalamin-5-phosphate synthase JYA99_RS08405 PF02277 Phosphoribosyltransferase JYA99_RS08410 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain JYA99_RS08410 PF05221 S-adenosyl-L-homocysteine hydrolase JYA99_RS08420 PF14552 Tautomerase enzyme JYA99_RS08425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYA99_RS08425 PF03466 LysR substrate binding domain JYA99_RS08435 PF00083 Sugar (and other) transporter JYA99_RS08435 PF07690 Major Facilitator Superfamily JYA99_RS08445 PF00990 Diguanylate cyclase, GGDEF domain JYA99_RS08445 PF00563 EAL domain JYA99_RS08445 PF13188 PAS domain JYA99_RS08445 PF03707 Bacterial signalling protein N terminal repeat JYA99_RS08455 PF09313 Domain of unknown function (DUF1971) JYA99_RS08460 PF08956 Domain of unknown function (DUF1869) JYA99_RS08465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYA99_RS08465 PF03466 LysR substrate binding domain JYA99_RS08475 PF00561 alpha/beta hydrolase fold JYA99_RS08480 PF00990 Diguanylate cyclase, GGDEF domain JYA99_RS08500 PF12833 Helix-turn-helix domain JYA99_RS08500 PF02311 AraC-like ligand binding domain JYA99_RS08515 PF00529 HlyD membrane-fusion protein of T1SS JYA99_RS08515 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JYA99_RS08540 PF07690 Major Facilitator Superfamily JYA99_RS08545 PF00196 Bacterial regulatory proteins, luxR family JYA99_RS08555 PF01380 SIS domain JYA99_RS08555 PF01418 Helix-turn-helix domain, rpiR family JYA99_RS08560 PF02558 Ketopantoate reductase PanE/ApbA JYA99_RS08560 PF08546 Ketopantoate reductase PanE/ApbA C terminal JYA99_RS08570 PF13356 Arm DNA-binding domain JYA99_RS08570 PF00589 Phage integrase family JYA99_RS08580 PF01554 MatE JYA99_RS08590 PF01048 Phosphorylase superfamily JYA99_RS08590 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus JYA99_RS08600 PF12146 Serine aminopeptidase, S33 JYA99_RS08610 PF08240 Alcohol dehydrogenase GroES-like domain JYA99_RS08610 PF00107 Zinc-binding dehydrogenase JYA99_RS08615 PF16925 Tetracyclin repressor-like, C-terminal domain JYA99_RS08615 PF00440 Bacterial regulatory proteins, tetR family JYA99_RS08620 PF00999 Sodium/hydrogen exchanger family JYA99_RS08630 PF03466 LysR substrate binding domain JYA99_RS08630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYA99_RS08635 PF03466 LysR substrate binding domain JYA99_RS08635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYA99_RS08640 PF03734 L,D-transpeptidase catalytic domain JYA99_RS08640 PF17969 L,D-transpeptidase C-terminal domain JYA99_RS08660 PF06167 Glucose-regulated metallo-peptidase M90 JYA99_RS08670 PF00267 Gram-negative porin JYA99_RS08680 PF01966 HD domain JYA99_RS08685 PF00145 C-5 cytosine-specific DNA methylase JYA99_RS08685 PF18284 DNA methylase N-terminal domain JYA99_RS08690 PF03852 DNA mismatch endonuclease Vsr JYA99_RS08695 PF00892 EamA-like transporter family JYA99_RS08700 PF05661 Protein of unknown function (DUF808) JYA99_RS08710 PF10733 Protein of unknown function (DUF2525) JYA99_RS08715 PF10781 Dextransucrase DSRB JYA99_RS08720 PF00196 Bacterial regulatory proteins, luxR family JYA99_RS08725 PF13987 YedD-like protein JYA99_RS08730 PF02806 Alpha amylase, C-terminal all-beta domain JYA99_RS08730 PF00128 Alpha amylase, catalytic domain JYA99_RS08735 PF00497 Bacterial extracellular solute-binding proteins, family 3 JYA99_RS08740 PF00291 Pyridoxal-phosphate dependent enzyme JYA99_RS08745 PF00528 Binding-protein-dependent transport system inner membrane component JYA99_RS08750 PF00005 ABC transporter JYA99_RS08755 PF03472 Autoinducer binding domain JYA99_RS08755 PF00196 Bacterial regulatory proteins, luxR family JYA99_RS08760 PF10769 Protein of unknown function (DUF2594) JYA99_RS08765 PF00072 Response regulator receiver domain JYA99_RS08765 PF00196 Bacterial regulatory proteins, luxR family JYA99_RS08770 PF08459 UvrC Helix-hairpin-helix N-terminal JYA99_RS08770 PF02151 UvrB/uvrC motif JYA99_RS08770 PF01541 GIY-YIG catalytic domain JYA99_RS08775 PF01066 CDP-alcohol phosphatidyltransferase JYA99_RS08795 PF00701 Dihydrodipicolinate synthetase family JYA99_RS08800 PF02810 SEC-C motif JYA99_RS08800 PF03695 Uncharacterised protein family (UPF0149) JYA99_RS08805 PF03222 Tryptophan/tyrosine permease family JYA99_RS08810 PF10678 Protein of unknown function (DUF2492) JYA99_RS08815 PF00210 Ferritin-like domain JYA99_RS08830 PF07690 Major Facilitator Superfamily JYA99_RS08835 PF10964 Protein of unknown function (DUF2766) JYA99_RS08850 PF00210 Ferritin-like domain JYA99_RS08860 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JYA99_RS08865 PF00005 ABC transporter JYA99_RS08870 PF02653 Branched-chain amino acid transport system / permease component JYA99_RS08875 PF02358 Trehalose-phosphatase JYA99_RS08880 PF00982 Glycosyltransferase family 20 JYA99_RS08885 PF00582 Universal stress protein family JYA99_RS08895 PF07470 Glycosyl Hydrolase Family 88 JYA99_RS08900 PF03485 Arginyl tRNA synthetase N terminal domain JYA99_RS08900 PF00750 tRNA synthetases class I (R) JYA99_RS08900 PF05746 DALR anticodon binding domain JYA99_RS08905 PF06185 YecM protein JYA99_RS08910 PF03932 CutC family JYA99_RS08915 PF08003 Protein of unknown function (DUF1698) JYA99_RS08920 PF13649 Methyltransferase domain JYA99_RS08925 PF01124 MAPEG family JYA99_RS08930 PF01904 Protein of unknown function DUF72 JYA99_RS08935 PF00857 Isochorismatase family JYA99_RS08940 PF02938 GAD domain JYA99_RS08940 PF00152 tRNA synthetases class II (D, K and N) JYA99_RS08940 PF01336 OB-fold nucleic acid binding domain JYA99_RS08945 PF00293 NUDIX domain JYA99_RS08950 PF01709 Transcriptional regulator JYA99_RS08955 PF02075 Crossover junction endodeoxyribonuclease RuvC JYA99_RS08960 PF07499 RuvA, C-terminal domain JYA99_RS08960 PF01330 RuvA N terminal domain JYA99_RS08965 PF05496 Holliday junction DNA helicase RuvB P-loop domain JYA99_RS08965 PF17864 RuvB AAA lid domain JYA99_RS08965 PF05491 RuvB C-terminal winged helix domain JYA99_RS08970 PF00950 ABC 3 transport family JYA99_RS08975 PF00005 ABC transporter JYA99_RS08980 PF01297 Zinc-uptake complex component A periplasmic JYA99_RS08985 PF01476 LysM domain JYA99_RS08985 PF08525 Opacity-associated protein A N-terminal motif JYA99_RS08985 PF01551 Peptidase family M23 JYA99_RS08990 PF03279 Bacterial lipid A biosynthesis acyltransferase JYA99_RS08995 PF02887 Pyruvate kinase, alpha/beta domain JYA99_RS08995 PF00224 Pyruvate kinase, barrel domain JYA99_RS09000 PF01418 Helix-turn-helix domain, rpiR family JYA99_RS09000 PF01380 SIS domain JYA99_RS09010 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain JYA99_RS09010 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain JYA99_RS09015 PF00920 Dehydratase family JYA99_RS09020 PF01081 KDPG and KHG aldolase JYA99_RS09025 PF02222 ATP-grasp domain JYA99_RS09030 PF07130 YebG protein JYA99_RS09035 PF04391 Protein of unknown function (DUF533) JYA99_RS09040 PF00326 Prolyl oligopeptidase family JYA99_RS09040 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain JYA99_RS09045 PF00929 Exonuclease JYA99_RS09050 PF06440 DNA polymerase III, theta subunit JYA99_RS09055 PF04234 CopC domain JYA99_RS09060 PF05425 Copper resistance protein D JYA99_RS09065 PF10709 Protein of unknown function (DUF2511) JYA99_RS09075 PF04393 Protein of unknown function (DUF535) JYA99_RS09080 PF00149 Calcineurin-like phosphoesterase JYA99_RS09085 PF07358 Protein of unknown function (DUF1482) JYA99_RS09090 PF07351 Protein of unknown function (DUF1480) JYA99_RS09095 PF01189 16S rRNA methyltransferase RsmB/F JYA99_RS09095 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF JYA99_RS09095 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF JYA99_RS09100 PF02470 MlaD protein JYA99_RS09105 PF04403 Paraquat-inducible protein A JYA99_RS09110 PF13185 GAF domain JYA99_RS09115 PF17516 ProQ C-terminal domain JYA99_RS09115 PF04352 ProQ/FINO family JYA99_RS09120 PF17804 Tail specific protease N-terminal domain JYA99_RS09120 PF00595 PDZ domain JYA99_RS09120 PF11818 C-terminal domain of tail specific protease (DUF3340) JYA99_RS09120 PF03572 Peptidase family S41 JYA99_RS09125 PF01435 Peptidase family M48 JYA99_RS09130 PF07690 Major Facilitator Superfamily JYA99_RS09135 PF09339 IclR helix-turn-helix domain JYA99_RS09135 PF01614 Bacterial transcriptional regulator JYA99_RS09140 PF13996 YobH-like protein JYA99_RS09145 PF13998 MgrB protein JYA99_RS09150 PF13974 YebO-like protein JYA99_RS09155 PF10736 Protein of unknown function (DUF2627) JYA99_RS09160 PF00313 'Cold-shock' DNA-binding domain JYA99_RS09165 PF00905 Penicillin binding protein transpeptidase domain JYA99_RS09165 PF03717 Penicillin-binding Protein dimerisation domain JYA99_RS09170 PF13847 Methyltransferase domain JYA99_RS09175 PF02659 Putative manganese efflux pump JYA99_RS09180 PF06173 Protein of unknown function (DUF986) JYA99_RS09185 PF03613 PTS system mannose/fructose/sorbose family IID component JYA99_RS09190 PF03609 PTS system sorbose-specific iic component JYA99_RS09195 PF03830 PTS system sorbose subfamily IIB component JYA99_RS09195 PF03610 PTS system fructose IIA component JYA99_RS09200 PF03471 Transporter associated domain JYA99_RS09200 PF03741 Integral membrane protein TerC family JYA99_RS09205 PF12792 CSS motif domain associated with EAL JYA99_RS09205 PF00563 EAL domain JYA99_RS09210 PF03313 Serine dehydratase alpha chain JYA99_RS09210 PF03315 Serine dehydratase beta chain JYA99_RS09215 PF00293 NUDIX domain JYA99_RS09220 PF04715 Anthranilate synthase component I, N terminal region JYA99_RS09220 PF00425 chorismate binding enzyme JYA99_RS09225 PF03701 Uncharacterised protein family (UPF0181) JYA99_RS09230 PF01042 Endoribonuclease L-PSP JYA99_RS09235 PF04851 Type III restriction enzyme, res subunit JYA99_RS09235 PF13307 Helicase C-terminal domain JYA99_RS09240 PF00814 Glycoprotease family JYA99_RS09245 PF03843 Outer membrane lipoprotein Slp family JYA99_RS09250 PF13193 AMP-binding enzyme C-terminal domain JYA99_RS09250 PF00501 AMP-binding enzyme JYA99_RS09255 PF01612 3'-5' exonuclease JYA99_RS09255 PF00570 HRDC domain JYA99_RS09260 PF03776 Septum formation topological specificity factor MinE JYA99_RS09265 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain JYA99_RS09270 PF05209 Septum formation inhibitor MinC, N-terminal domain JYA99_RS09270 PF03775 Septum formation inhibitor MinC, C-terminal domain JYA99_RS09275 PF05166 YcgL domain JYA99_RS09280 PF01557 Fumarylacetoacetate (FAA) hydrolase family JYA99_RS09285 PF03692 Putative zinc- or iron-chelating domain JYA99_RS09295 PF02600 Disulfide bond formation protein DsbB JYA99_RS09300 PF06450 Bacterial Na+/H+ antiporter B (NhaB) JYA99_RS09305 PF07840 FadR C-terminal domain JYA99_RS09305 PF00392 Bacterial regulatory proteins, gntR family JYA99_RS09310 PF04293 SpoVR like protein JYA99_RS09320 PF01266 FAD dependent oxidoreductase JYA99_RS09325 PF01168 Alanine racemase, N-terminal domain JYA99_RS09325 PF00842 Alanine racemase, C-terminal domain JYA99_RS09330 PF00999 Sodium/hydrogen exchanger family JYA99_RS09330 PF02080 TrkA-C domain JYA99_RS09330 PF03471 Transporter associated domain JYA99_RS09335 PF02016 LD-carboxypeptidase N-terminal domain JYA99_RS09335 PF17676 LD-carboxypeptidase C-terminal domain JYA99_RS09340 PF01464 Transglycosylase SLT domain JYA99_RS09345 PF07715 TonB-dependent Receptor Plug Domain JYA99_RS09345 PF00593 TonB dependent receptor JYA99_RS09350 PF01204 Trehalase JYA99_RS09360 PF14403 Circularly permuted ATP-grasp type 2 JYA99_RS09400 PF03466 LysR substrate binding domain JYA99_RS09400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYA99_RS09405 PF00291 Pyridoxal-phosphate dependent enzyme JYA99_RS09410 PF03222 Tryptophan/tyrosine permease family JYA99_RS09415 PF00871 Acetokinase family JYA99_RS09420 PF02901 Pyruvate formate lyase-like JYA99_RS09420 PF01228 Glycine radical JYA99_RS09430 PF13458 Periplasmic binding protein JYA99_RS09435 PF02653 Branched-chain amino acid transport system / permease component JYA99_RS09440 PF02653 Branched-chain amino acid transport system / permease component JYA99_RS09440 PF11862 Domain of unknown function (DUF3382) JYA99_RS09445 PF12399 Branched-chain amino acid ATP-binding cassette transporter JYA99_RS09445 PF00005 ABC transporter JYA99_RS09450 PF00005 ABC transporter JYA99_RS09455 PF03466 LysR substrate binding domain JYA99_RS09455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYA99_RS09460 PF01293 Phosphoenolpyruvate carboxykinase JYA99_RS09470 PF03466 LysR substrate binding domain JYA99_RS09470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYA99_RS09475 PF07690 Major Facilitator Superfamily JYA99_RS09485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYA99_RS09485 PF03466 LysR substrate binding domain JYA99_RS09495 PF00849 RNA pseudouridylate synthase JYA99_RS09500 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) JYA99_RS09520 PF00691 OmpA family JYA99_RS09520 PF13488 Glycine zipper JYA99_RS09530 PF04717 Type VI secretion system, phage-baseplate injector JYA99_RS09530 PF13296 Putative type VI secretion system Rhs element Vgr JYA99_RS09530 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) JYA99_RS09615 PF13407 Periplasmic binding protein domain JYA99_RS09625 PF06071 Protein of unknown function (DUF933) JYA99_RS09625 PF01926 50S ribosome-binding GTPase JYA99_RS09630 PF01195 Peptidyl-tRNA hydrolase JYA99_RS09635 PF10762 Protein of unknown function (DUF2583) JYA99_RS09645 PF00916 Sulfate permease family JYA99_RS09645 PF01740 STAS domain JYA99_RS09650 PF14572 Phosphoribosyl synthetase-associated domain JYA99_RS09650 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase JYA99_RS09655 PF08544 GHMP kinases C terminal JYA99_RS09655 PF00288 GHMP kinases N terminal domain JYA99_RS09660 PF03550 Outer membrane lipoprotein LolB JYA99_RS09665 PF01488 Shikimate / quinate 5-dehydrogenase JYA99_RS09665 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain JYA99_RS09665 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain JYA99_RS09670 PF03462 PCRF domain JYA99_RS09670 PF00472 RF-1 domain JYA99_RS09675 PF17827 PrmC N-terminal domain JYA99_RS09675 PF13847 Methyltransferase domain JYA99_RS09680 PF04247 Invasion gene expression up-regulator, SirB JYA99_RS09685 PF13369 Transglutaminase-like superfamily JYA99_RS09690 PF00793 DAHP synthetase I family JYA99_RS09695 PF01699 Sodium/calcium exchanger protein JYA99_RS09700 PF06150 ChaB JYA99_RS09705 PF04752 ChaC-like protein JYA99_RS09715 PF02635 DsrE/DsrF-like family JYA99_RS09720 PF03861 ANTAR domain JYA99_RS09720 PF08376 Nitrate and nitrite sensing JYA99_RS09730 PF00528 Binding-protein-dependent transport system inner membrane component JYA99_RS09735 PF00005 ABC transporter JYA99_RS09740 PF13806 Rieske-like [2Fe-2S] domain JYA99_RS09740 PF07992 Pyridine nucleotide-disulphide oxidoreductase JYA99_RS09740 PF18267 Rubredoxin NAD+ reductase C-terminal domain JYA99_RS09740 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JYA99_RS09740 PF04324 BFD-like [2Fe-2S] binding domain JYA99_RS09740 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JYA99_RS09745 PF04324 BFD-like [2Fe-2S] binding domain JYA99_RS09745 PF00384 Molybdopterin oxidoreductase JYA99_RS09745 PF01568 Molydopterin dinucleotide binding domain JYA99_RS09745 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JYA99_RS09750 PF11924 Inverse autotransporter, beta-domain JYA99_RS09755 PF00072 Response regulator receiver domain JYA99_RS09755 PF00196 Bacterial regulatory proteins, luxR family JYA99_RS09760 PF07730 Histidine kinase JYA99_RS09760 PF00672 HAMP domain JYA99_RS09760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYA99_RS09760 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term JYA99_RS09765 PF07690 Major Facilitator Superfamily JYA99_RS09775 PF01568 Molydopterin dinucleotide binding domain JYA99_RS09775 PF00384 Molybdopterin oxidoreductase JYA99_RS09775 PF14710 Respiratory nitrate reductase alpha N-terminal JYA99_RS09780 PF14711 Respiratory nitrate reductase beta C-terminal JYA99_RS09780 PF13247 4Fe-4S dicluster domain JYA99_RS09785 PF02613 Nitrate reductase delta subunit JYA99_RS09790 PF02665 Nitrate reductase gamma subunit JYA99_RS09800 PF01037 Lrp/AsnC ligand binding domain JYA99_RS09830 PF00551 Formyl transferase JYA99_RS09830 PF01842 ACT domain JYA99_RS09835 PF02810 SEC-C motif JYA99_RS09840 PF01734 Patatin-like phospholipase JYA99_RS09845 PF00072 Response regulator receiver domain JYA99_RS09850 PF00483 Nucleotidyl transferase JYA99_RS09855 PF00816 H-NS histone family JYA99_RS09865 PF00265 Thymidine kinase JYA99_RS09870 PF00465 Iron-containing alcohol dehydrogenase JYA99_RS09870 PF00171 Aldehyde dehydrogenase family JYA99_RS09880 PF01914 MarC family integral membrane protein JYA99_RS09885 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JYA99_RS09890 PF00528 Binding-protein-dependent transport system inner membrane component JYA99_RS09895 PF12911 N-terminal TM domain of oligopeptide transport permease C JYA99_RS09895 PF00528 Binding-protein-dependent transport system inner membrane component JYA99_RS09900 PF00005 ABC transporter JYA99_RS09900 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JYA99_RS09905 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JYA99_RS09905 PF00005 ABC transporter JYA99_RS09910 PF00520 Ion transport protein JYA99_RS09910 PF00027 Cyclic nucleotide-binding domain JYA99_RS09915 PF04269 Protein of unknown function, DUF440 JYA99_RS09920 PF13091 PLD-like domain JYA99_RS09920 PF13396 Phospholipase_D-nuclease N-terminal JYA99_RS09930 PF04264 YceI-like domain JYA99_RS09940 PF03795 YCII-related domain JYA99_RS09945 PF03544 Gram-negative bacterial TonB protein C-terminal JYA99_RS09950 PF03881 Fructosamine kinase JYA99_RS09955 PF11080 Endoribonuclease GhoS JYA99_RS09960 PF00294 pfkB family carbohydrate kinase JYA99_RS09965 PF04338 Protein of unknown function, DUF481 JYA99_RS09975 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JYA99_RS09975 PF03129 Anticodon binding domain JYA99_RS09975 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JYA99_RS09975 PF02824 TGS domain JYA99_RS09980 PF05198 Translation initiation factor IF-3, N-terminal domain JYA99_RS09980 PF00707 Translation initiation factor IF-3, C-terminal domain JYA99_RS09985 PF01632 Ribosomal protein L35 JYA99_RS09990 PF00453 Ribosomal protein L20 JYA99_RS10000 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain JYA99_RS10000 PF01409 tRNA synthetases class II core domain (F) JYA99_RS10005 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain JYA99_RS10005 PF03147 Ferredoxin-fold anticodon binding domain JYA99_RS10005 PF01588 Putative tRNA binding domain JYA99_RS10005 PF03483 B3/4 domain JYA99_RS10005 PF03484 tRNA synthetase B5 domain JYA99_RS10010 PF00216 Bacterial DNA-binding protein JYA99_RS10020 PF01266 FAD dependent oxidoreductase JYA99_RS10025 PF03466 LysR substrate binding domain JYA99_RS10025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYA99_RS10035 PF01032 FecCD transport family JYA99_RS10040 PF03180 NLPA lipoprotein JYA99_RS10045 PF00255 Glutathione peroxidase JYA99_RS10050 PF00005 ABC transporter JYA99_RS10055 PF00877 NlpC/P60 family JYA99_RS10060 PF02696 Uncharacterized ACR, YdiU/UPF0061 family JYA99_RS10065 PF10636 Hemin uptake protein hemP JYA99_RS10070 PF00793 DAHP synthetase I family JYA99_RS10075 PF03618 Kinase/pyrophosphorylase JYA99_RS10085 PF00391 PEP-utilising enzyme, mobile domain JYA99_RS10085 PF02896 PEP-utilising enzyme, TIM barrel domain JYA99_RS10085 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain JYA99_RS10095 PF01594 AI-2E family transporter JYA99_RS10100 PF13183 4Fe-4S dicluster domain JYA99_RS10100 PF01565 FAD binding domain JYA99_RS10100 PF02913 FAD linked oxidases, C-terminal domain JYA99_RS10105 PF03061 Thioesterase superfamily JYA99_RS10110 PF04226 Transglycosylase associated protein JYA99_RS10125 PF01717 Cobalamin-independent synthase, Catalytic domain JYA99_RS10125 PF08267 Cobalamin-independent synthase, N-terminal domain JYA99_RS10130 PF07690 Major Facilitator Superfamily JYA99_RS10135 PF00005 ABC transporter JYA99_RS10140 PF01032 FecCD transport family JYA99_RS10150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYA99_RS10150 PF03466 LysR substrate binding domain JYA99_RS10170 PF00873 AcrB/AcrD/AcrF family JYA99_RS10175 PF01070 FMN-dependent dehydrogenase JYA99_RS10180 PF00440 Bacterial regulatory proteins, tetR family JYA99_RS10200 PF01521 Iron-sulphur cluster biosynthesis JYA99_RS10205 PF01458 Uncharacterized protein family (UPF0051) JYA99_RS10210 PF00005 ABC transporter JYA99_RS10215 PF01458 Uncharacterized protein family (UPF0051) JYA99_RS10220 PF00266 Aminotransferase class-V JYA99_RS10225 PF02657 Fe-S metabolism associated domain JYA99_RS10230 PF17969 L,D-transpeptidase C-terminal domain JYA99_RS10230 PF03734 L,D-transpeptidase catalytic domain JYA99_RS10230 PF01476 LysM domain JYA99_RS10235 PF04728 Lipoprotein leucine-zipper JYA99_RS10240 PF02887 Pyruvate kinase, alpha/beta domain JYA99_RS10240 PF00224 Pyruvate kinase, barrel domain JYA99_RS10255 PF10965 Protein of unknown function (DUF2767) JYA99_RS10260 PF17926 Tetracyclin repressor-like, C-terminal domain JYA99_RS10260 PF00440 Bacterial regulatory proteins, tetR family JYA99_RS10265 PF01261 Xylose isomerase-like TIM barrel JYA99_RS10265 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JYA99_RS10270 PF07690 Major Facilitator Superfamily JYA99_RS10275 PF01488 Shikimate / quinate 5-dehydrogenase JYA99_RS10275 PF18317 Shikimate 5'-dehydrogenase C-terminal domain JYA99_RS10275 PF08501 Shikimate dehydrogenase substrate binding domain JYA99_RS10285 PF00005 ABC transporter JYA99_RS10290 PF01032 FecCD transport family JYA99_RS10295 PF01497 Periplasmic binding protein JYA99_RS10300 PF01614 Bacterial transcriptional regulator JYA99_RS10300 PF09339 IclR helix-turn-helix domain JYA99_RS10305 PF01494 FAD binding domain JYA99_RS10310 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase JYA99_RS10315 PF12697 Alpha/beta hydrolase family JYA99_RS10320 PF01557 Fumarylacetoacetate (FAA) hydrolase family JYA99_RS10325 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation JYA99_RS10325 PF01118 Semialdehyde dehydrogenase, NAD binding domain JYA99_RS10330 PF07836 DmpG-like communication domain JYA99_RS10330 PF00682 HMGL-like JYA99_RS10335 PF07690 Major Facilitator Superfamily JYA99_RS10340 PF02578 Multi-copper polyphenol oxidoreductase laccase JYA99_RS10350 PF05995 Cysteine dioxygenase type I JYA99_RS10355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYA99_RS10355 PF03466 LysR substrate binding domain JYA99_RS10360 PF00296 Luciferase-like monooxygenase JYA99_RS10380 PF00528 Binding-protein-dependent transport system inner membrane component JYA99_RS10385 PF00005 ABC transporter JYA99_RS10390 PF07715 TonB-dependent Receptor Plug Domain JYA99_RS10395 PF00005 ABC transporter JYA99_RS10405 PF01032 FecCD transport family JYA99_RS10420 PF00497 Bacterial extracellular solute-binding proteins, family 3 JYA99_RS10425 PF00528 Binding-protein-dependent transport system inner membrane component JYA99_RS10430 PF00005 ABC transporter JYA99_RS10445 PF07690 Major Facilitator Superfamily JYA99_RS10470 PF00384 Molybdopterin oxidoreductase JYA99_RS10470 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JYA99_RS10470 PF01568 Molydopterin dinucleotide binding domain JYA99_RS10475 PF02615 Malate/L-lactate dehydrogenase JYA99_RS10485 PF00528 Binding-protein-dependent transport system inner membrane component JYA99_RS10490 PF08402 TOBE domain JYA99_RS10490 PF00005 ABC transporter JYA99_RS10500 PF13618 Gluconate 2-dehydrogenase subunit 3 JYA99_RS10505 PF05199 GMC oxidoreductase JYA99_RS10505 PF00732 GMC oxidoreductase JYA99_RS10510 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JYA99_RS10510 PF00034 Cytochrome c JYA99_RS10515 PF00005 ABC transporter JYA99_RS10520 PF03379 CcmB protein JYA99_RS10525 PF01578 Cytochrome C assembly protein JYA99_RS10535 PF03100 CcmE JYA99_RS10540 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal JYA99_RS10540 PF01578 Cytochrome C assembly protein JYA99_RS10545 PF08534 Redoxin JYA99_RS10550 PF03918 Cytochrome C biogenesis protein JYA99_RS10570 PF03544 Gram-negative bacterial TonB protein C-terminal JYA99_RS10585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYA99_RS10585 PF00672 HAMP domain JYA99_RS10585 PF00512 His Kinase A (phospho-acceptor) domain JYA99_RS10590 PF00072 Response regulator receiver domain JYA99_RS10590 PF00486 Transcriptional regulatory protein, C terminal JYA99_RS10605 PF00873 AcrB/AcrD/AcrF family JYA99_RS10620 PF00106 short chain dehydrogenase JYA99_RS10625 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JYA99_RS10625 PF00205 Thiamine pyrophosphate enzyme, central domain JYA99_RS10625 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JYA99_RS10630 PF03306 Alpha-acetolactate decarboxylase JYA99_RS10635 PF03466 LysR substrate binding domain JYA99_RS10635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYA99_RS10640 PF00106 short chain dehydrogenase JYA99_RS10650 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JYA99_RS10650 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JYA99_RS10655 PF02803 Thiolase, C-terminal domain JYA99_RS10655 PF00108 Thiolase, N-terminal domain JYA99_RS10660 PF01144 Coenzyme A transferase JYA99_RS10665 PF01144 Coenzyme A transferase JYA99_RS10670 PF03466 LysR substrate binding domain JYA99_RS10670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYA99_RS10685 PF07690 Major Facilitator Superfamily JYA99_RS10690 PF01638 HxlR-like helix-turn-helix JYA99_RS10700 PF07690 Major Facilitator Superfamily JYA99_RS10705 PF09828 Chromate resistance exported protein JYA99_RS10715 PF02913 FAD linked oxidases, C-terminal domain JYA99_RS10715 PF01565 FAD binding domain JYA99_RS10720 PF00528 Binding-protein-dependent transport system inner membrane component JYA99_RS10725 PF00005 ABC transporter JYA99_RS10735 PF02633 Creatinine amidohydrolase JYA99_RS10740 PF01042 Endoribonuclease L-PSP JYA99_RS10745 PF07969 Amidohydrolase family JYA99_RS10750 PF00111 2Fe-2S iron-sulfur cluster binding domain JYA99_RS10755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYA99_RS10755 PF03466 LysR substrate binding domain JYA99_RS10765 PF01979 Amidohydrolase family JYA99_RS10780 PF00202 Aminotransferase class-III JYA99_RS10795 PF13520 Amino acid permease JYA99_RS10800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYA99_RS10800 PF03466 LysR substrate binding domain JYA99_RS10805 PF07690 Major Facilitator Superfamily JYA99_RS10825 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JYA99_RS10825 PF00005 ABC transporter JYA99_RS10830 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JYA99_RS10830 PF00005 ABC transporter JYA99_RS10835 PF00528 Binding-protein-dependent transport system inner membrane component JYA99_RS10840 PF00528 Binding-protein-dependent transport system inner membrane component JYA99_RS10845 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JYA99_RS10855 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JYA99_RS10860 PF00455 DeoR C terminal sensor domain JYA99_RS10860 PF08220 DeoR-like helix-turn-helix domain JYA99_RS10870 PF00484 Carbonic anhydrase JYA99_RS10895 PF00753 Metallo-beta-lactamase superfamily JYA99_RS10895 PF10996 Beta-Casp domain JYA99_RS10895 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain JYA99_RS10905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYA99_RS10905 PF03466 LysR substrate binding domain JYA99_RS10915 PF00106 short chain dehydrogenase JYA99_RS10920 PF13296 Putative type VI secretion system Rhs element Vgr JYA99_RS10920 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) JYA99_RS10920 PF04717 Type VI secretion system, phage-baseplate injector JYA99_RS10940 PF00182 Chitinase class I JYA99_RS11000 PF03641 Possible lysine decarboxylase JYA99_RS11010 PF01554 MatE JYA99_RS11015 PF00677 Lumazine binding domain JYA99_RS11025 PF07690 Major Facilitator Superfamily JYA99_RS11030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYA99_RS11030 PF03466 LysR substrate binding domain JYA99_RS11035 PF00356 Bacterial regulatory proteins, lacI family JYA99_RS11045 PF07690 Major Facilitator Superfamily JYA99_RS11050 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain JYA99_RS11050 PF02777 Iron/manganese superoxide dismutases, C-terminal domain JYA99_RS11060 PF00877 NlpC/P60 family JYA99_RS11065 PF00462 Glutaredoxin JYA99_RS11070 PF00929 Exonuclease JYA99_RS11075 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JYA99_RS11080 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JYA99_RS11085 PF16925 Tetracyclin repressor-like, C-terminal domain JYA99_RS11085 PF00440 Bacterial regulatory proteins, tetR family JYA99_RS11090 PF06945 Protein of unknown function (DUF1289) JYA99_RS11095 PF00248 Aldo/keto reductase family JYA99_RS11100 PF00080 Copper/zinc superoxide dismutase (SODC) JYA99_RS11105 PF04632 Fusaric acid resistance protein family JYA99_RS11110 PF00529 HlyD membrane-fusion protein of T1SS JYA99_RS11110 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JYA99_RS11115 PF07869 Protein of unknown function (DUF1656) JYA99_RS11120 PF01047 MarR family JYA99_RS11125 PF17158 Membrane-associated sensor, integral membrane domain JYA99_RS11125 PF00990 Diguanylate cyclase, GGDEF domain JYA99_RS11130 PF05433 Glycine zipper 2TM domain JYA99_RS11135 PF03702 Anhydro-N-acetylmuramic acid kinase JYA99_RS11140 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme JYA99_RS11145 PF01243 Pyridoxamine 5'-phosphate oxidase JYA99_RS11145 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region JYA99_RS11150 PF00579 tRNA synthetases class I (W and Y) JYA99_RS11155 PF08543 Phosphomethylpyrimidine kinase JYA99_RS11160 PF00043 Glutathione S-transferase, C-terminal domain JYA99_RS11160 PF02798 Glutathione S-transferase, N-terminal domain JYA99_RS11165 PF00854 POT family JYA99_RS11170 PF00730 HhH-GPD superfamily base excision DNA repair protein JYA99_RS11170 PF10576 Iron-sulfur binding domain of endonuclease III JYA99_RS11170 PF00633 Helix-hairpin-helix motif JYA99_RS11175 PF02508 Rnf-Nqr subunit, membrane protein JYA99_RS11180 PF04205 FMN-binding domain JYA99_RS11185 PF03116 NQR2, RnfD, RnfE family JYA99_RS11190 PF10531 SLBB domain JYA99_RS11190 PF13375 RnfC Barrel sandwich hybrid domain JYA99_RS11190 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit JYA99_RS11190 PF12838 4Fe-4S dicluster domain JYA99_RS11195 PF04060 Putative Fe-S cluster JYA99_RS11200 PF02508 Rnf-Nqr subunit, membrane protein JYA99_RS11205 PF10754 Protein of unknown function (DUF2569) JYA99_RS11210 PF05321 Haemolysin expression modulating protein JYA99_RS11215 PF00232 Glycosyl hydrolase family 1 JYA99_RS11225 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JYA99_RS11225 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JYA99_RS11230 PF00962 Adenosine/AMP deaminase JYA99_RS11235 PF07690 Major Facilitator Superfamily JYA99_RS11240 PF01638 HxlR-like helix-turn-helix JYA99_RS11255 PF01292 Prokaryotic cytochrome b561 JYA99_RS11260 PF02583 Metal-sensitive transcriptional repressor JYA99_RS11265 PF08240 Alcohol dehydrogenase GroES-like domain JYA99_RS11265 PF00107 Zinc-binding dehydrogenase JYA99_RS11270 PF01011 PQQ enzyme repeat JYA99_RS11275 PF03466 LysR substrate binding domain JYA99_RS11275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYA99_RS11280 PF00775 Dioxygenase JYA99_RS11285 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal JYA99_RS11285 PF00775 Dioxygenase JYA99_RS11290 PF07063 Domain of unknown function (DUF1338) JYA99_RS11295 PF00135 Carboxylesterase family JYA99_RS11300 PF08240 Alcohol dehydrogenase GroES-like domain JYA99_RS11300 PF00107 Zinc-binding dehydrogenase JYA99_RS11305 PF04349 Periplasmic glucan biosynthesis protein, MdoG JYA99_RS11310 PF13302 Acetyltransferase (GNAT) domain JYA99_RS11315 PF18836 Beta solenoid repeat from YDCK JYA99_RS11320 PF03595 Voltage-dependent anion channel JYA99_RS11325 PF03848 Tellurite resistance protein TehB JYA99_RS11330 PF11769 Protein of unknown function (DUF3313) JYA99_RS11335 PF00892 EamA-like transporter family JYA99_RS11340 PF12833 Helix-turn-helix domain JYA99_RS11340 PF06445 GyrI-like small molecule binding domain JYA99_RS11345 PF03594 Benzoate membrane transport protein JYA99_RS11350 PF01381 Helix-turn-helix JYA99_RS11350 PF07883 Cupin domain JYA99_RS11360 PF12392 Collagenase JYA99_RS11360 PF01136 Peptidase family U32 JYA99_RS11380 PF02322 Cytochrome bd terminal oxidase subunit II JYA99_RS11385 PF01654 Cytochrome bd terminal oxidase subunit I JYA99_RS11390 PF00155 Aminotransferase class I and II JYA99_RS11390 PF00392 Bacterial regulatory proteins, gntR family JYA99_RS11395 PF13416 Bacterial extracellular solute-binding protein JYA99_RS11400 PF00005 ABC transporter JYA99_RS11400 PF08402 TOBE domain JYA99_RS11405 PF00528 Binding-protein-dependent transport system inner membrane component JYA99_RS11410 PF00528 Binding-protein-dependent transport system inner membrane component JYA99_RS11415 PF00171 Aldehyde dehydrogenase family JYA99_RS11440 PF10753 Toxin GhoT_OrtT JYA99_RS11445 PF00364 Biotin-requiring enzyme JYA99_RS11445 PF00561 alpha/beta hydrolase fold JYA99_RS11450 PF00171 Aldehyde dehydrogenase family JYA99_RS11455 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JYA99_RS11460 PF10735 Protein of unknown function (DUF2526) JYA99_RS11465 PF04657 Putative inner membrane exporter, YdcZ JYA99_RS11470 PF00583 Acetyltransferase (GNAT) family JYA99_RS11475 PF08671 Anti-repressor SinI JYA99_RS11475 PF01381 Helix-turn-helix JYA99_RS11480 PF16884 N-terminal domain of oxidoreductase JYA99_RS11480 PF00107 Zinc-binding dehydrogenase JYA99_RS11485 PF01156 Inosine-uridine preferring nucleoside hydrolase JYA99_RS11495 PF04175 Protein of unknown function (DUF406) JYA99_RS11500 PF01979 Amidohydrolase family JYA99_RS11505 PF07715 TonB-dependent Receptor Plug Domain JYA99_RS11505 PF00593 TonB dependent receptor JYA99_RS11520 PF00324 Amino acid permease JYA99_RS11525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYA99_RS11525 PF03466 LysR substrate binding domain JYA99_RS11530 PF01202 Shikimate kinase JYA99_RS11535 PF00296 Luciferase-like monooxygenase JYA99_RS11540 PF07687 Peptidase dimerisation domain JYA99_RS11540 PF01546 Peptidase family M20/M25/M40 JYA99_RS11545 PF00296 Luciferase-like monooxygenase JYA99_RS11550 PF00497 Bacterial extracellular solute-binding proteins, family 3 JYA99_RS11560 PF00528 Binding-protein-dependent transport system inner membrane component JYA99_RS11565 PF00005 ABC transporter JYA99_RS11575 PF13417 Glutathione S-transferase, N-terminal domain JYA99_RS11580 PF01361 Tautomerase enzyme JYA99_RS11585 PF01613 Flavin reductase like domain JYA99_RS11590 PF00005 ABC transporter JYA99_RS11590 PF17912 MalK OB fold domain JYA99_RS11600 PF00528 Binding-protein-dependent transport system inner membrane component JYA99_RS11605 PF00797 N-acetyltransferase JYA99_RS11610 PF02665 Nitrate reductase gamma subunit JYA99_RS11615 PF02613 Nitrate reductase delta subunit JYA99_RS11620 PF14711 Respiratory nitrate reductase beta C-terminal JYA99_RS11620 PF13247 4Fe-4S dicluster domain JYA99_RS11625 PF00384 Molybdopterin oxidoreductase JYA99_RS11625 PF01568 Molydopterin dinucleotide binding domain JYA99_RS11625 PF14710 Respiratory nitrate reductase alpha N-terminal JYA99_RS11630 PF07690 Major Facilitator Superfamily JYA99_RS11640 PF07690 Major Facilitator Superfamily JYA99_RS11645 PF01614 Bacterial transcriptional regulator JYA99_RS11645 PF09339 IclR helix-turn-helix domain JYA99_RS11650 PF13378 Enolase C-terminal domain-like JYA99_RS11650 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JYA99_RS11655 PF02426 Muconolactone delta-isomerase JYA99_RS11660 PF04444 Catechol dioxygenase N terminus JYA99_RS11660 PF00775 Dioxygenase JYA99_RS11665 PF00848 Ring hydroxylating alpha subunit (catalytic domain) JYA99_RS11665 PF00355 Rieske [2Fe-2S] domain JYA99_RS11670 PF00866 Ring hydroxylating beta subunit JYA99_RS11675 PF00970 Oxidoreductase FAD-binding domain JYA99_RS11675 PF00175 Oxidoreductase NAD-binding domain JYA99_RS11675 PF00111 2Fe-2S iron-sulfur cluster binding domain JYA99_RS11680 PF00106 short chain dehydrogenase JYA99_RS11685 PF00892 EamA-like transporter family JYA99_RS11695 PF09163 Formate dehydrogenase N, transmembrane JYA99_RS11695 PF12800 4Fe-4S binding domain JYA99_RS11695 PF13247 4Fe-4S dicluster domain JYA99_RS11700 PF01292 Prokaryotic cytochrome b561 JYA99_RS11715 PF03976 Polyphosphate kinase 2 (PPK2) JYA99_RS11725 PF07690 Major Facilitator Superfamily JYA99_RS11735 PF00296 Luciferase-like monooxygenase JYA99_RS11740 PF00005 ABC transporter JYA99_RS11740 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JYA99_RS11745 PF12911 N-terminal TM domain of oligopeptide transport permease C JYA99_RS11745 PF00528 Binding-protein-dependent transport system inner membrane component JYA99_RS11750 PF00528 Binding-protein-dependent transport system inner membrane component JYA99_RS11755 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JYA99_RS11760 PF00107 Zinc-binding dehydrogenase JYA99_RS11760 PF08240 Alcohol dehydrogenase GroES-like domain JYA99_RS11765 PF00719 Inorganic pyrophosphatase JYA99_RS11775 PF00005 ABC transporter JYA99_RS11775 PF12848 ABC transporter JYA99_RS11790 PF00390 Malic enzyme, N-terminal domain JYA99_RS11790 PF03949 Malic enzyme, NAD binding domain JYA99_RS11800 PF08136 30S ribosomal protein subunit S22 family JYA99_RS11810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYA99_RS11810 PF03466 LysR substrate binding domain JYA99_RS11815 PF10820 Protein of unknown function (DUF2543) JYA99_RS11825 PF10685 Stress-induced bacterial acidophilic repeat motif JYA99_RS11835 PF05974 Domain of unknown function (DUF892) JYA99_RS11845 PF00128 Alpha amylase, catalytic domain JYA99_RS11845 PF16657 Maltogenic Amylase, C-terminal domain JYA99_RS11850 PF00106 short chain dehydrogenase JYA99_RS11855 PF04239 Protein of unknown function (DUF421) JYA99_RS11865 PF04076 Bacterial OB fold (BOF) protein JYA99_RS11875 PF02566 OsmC-like protein JYA99_RS11895 PF01545 Cation efflux family JYA99_RS11895 PF16916 Dimerisation domain of Zinc Transporter JYA99_RS11900 PF01062 Bestrophin, RFP-TM, chloride channel JYA99_RS11905 PF00384 Molybdopterin oxidoreductase JYA99_RS11910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYA99_RS11910 PF03466 LysR substrate binding domain JYA99_RS11915 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit JYA99_RS11920 PF00083 Sugar (and other) transporter JYA99_RS11925 PF02308 MgtC family JYA99_RS11930 PF03969 AFG1-like ATPase JYA99_RS11935 PF00141 Peroxidase JYA99_RS11940 PF03466 LysR substrate binding domain JYA99_RS11940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYA99_RS11955 PF00905 Penicillin binding protein transpeptidase domain JYA99_RS11955 PF03717 Penicillin-binding Protein dimerisation domain JYA99_RS11960 PF00958 GMP synthase C terminal domain JYA99_RS11960 PF00117 Glutamine amidotransferase class-I JYA99_RS11960 PF02540 NAD synthase JYA99_RS11965 PF00675 Insulinase (Peptidase family M16) JYA99_RS11970 PF13186 Iron-sulfur cluster-binding domain JYA99_RS11970 PF04055 Radical SAM superfamily JYA99_RS11975 PF05402 Coenzyme PQQ synthesis protein D (PqqD) JYA99_RS11980 PF03070 TENA/THI-4/PQQC family JYA99_RS11985 PF12706 Beta-lactamase superfamily domain JYA99_RS11990 PF08042 PqqA family JYA99_RS11995 PF01244 Membrane dipeptidase (Peptidase family M19) JYA99_RS12005 PF00486 Transcriptional regulatory protein, C terminal JYA99_RS12005 PF00072 Response regulator receiver domain JYA99_RS12010 PF00672 HAMP domain JYA99_RS12010 PF00512 His Kinase A (phospho-acceptor) domain JYA99_RS12010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYA99_RS12015 PF17991 Thioredoxin like C-terminal domain JYA99_RS12015 PF02683 Cytochrome C biogenesis protein transmembrane region JYA99_RS12015 PF00578 AhpC/TSA family JYA99_RS12025 PF00282 Pyridoxal-dependent decarboxylase conserved domain JYA99_RS12030 PF00202 Aminotransferase class-III JYA99_RS12035 PF09084 NMT1/THI5 like JYA99_RS12040 PF00528 Binding-protein-dependent transport system inner membrane component JYA99_RS12045 PF00005 ABC transporter JYA99_RS12050 PF03070 TENA/THI-4/PQQC family JYA99_RS12065 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JYA99_RS12065 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JYA99_RS12075 PF00356 Bacterial regulatory proteins, lacI family JYA99_RS12080 PF08448 PAS fold JYA99_RS12080 PF00990 Diguanylate cyclase, GGDEF domain JYA99_RS12085 PF01979 Amidohydrolase family JYA99_RS12090 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin JYA99_RS12130 PF00300 Histidine phosphatase superfamily (branch 1) JYA99_RS12140 PF00106 short chain dehydrogenase JYA99_RS12145 PF00117 Glutamine amidotransferase class-I JYA99_RS12165 PF02801 Beta-ketoacyl synthase, C-terminal domain JYA99_RS12165 PF00109 Beta-ketoacyl synthase, N-terminal domain JYA99_RS12185 PF02774 Semialdehyde dehydrogenase, dimerisation domain JYA99_RS12185 PF01118 Semialdehyde dehydrogenase, NAD binding domain JYA99_RS12200 PF01425 Amidase JYA99_RS12225 PF00528 Binding-protein-dependent transport system inner membrane component JYA99_RS12230 PF00528 Binding-protein-dependent transport system inner membrane component JYA99_RS12235 PF00005 ABC transporter JYA99_RS12240 PF00266 Aminotransferase class-V JYA99_RS12245 PF01546 Peptidase family M20/M25/M40 JYA99_RS12245 PF07687 Peptidase dimerisation domain JYA99_RS12250 PF03060 Nitronate monooxygenase JYA99_RS12255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYA99_RS12255 PF03466 LysR substrate binding domain JYA99_RS12265 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JYA99_RS12270 PF13454 FAD-NAD(P)-binding JYA99_RS12275 PF00083 Sugar (and other) transporter JYA99_RS12275 PF07690 Major Facilitator Superfamily JYA99_RS12290 PF00440 Bacterial regulatory proteins, tetR family JYA99_RS12320 PF07690 Major Facilitator Superfamily JYA99_RS12330 PF00356 Bacterial regulatory proteins, lacI family JYA99_RS12335 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JYA99_RS12345 PF03611 PTS system sugar-specific permease component JYA99_RS12350 PF00834 Ribulose-phosphate 3 epimerase family JYA99_RS12360 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JYA99_RS12365 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JYA99_RS12365 PF02378 Phosphotransferase system, EIIC JYA99_RS12370 PF01810 LysE type translocator JYA99_RS12380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYA99_RS12380 PF03466 LysR substrate binding domain JYA99_RS12385 PF03466 LysR substrate binding domain JYA99_RS12385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYA99_RS12390 PF00753 Metallo-beta-lactamase superfamily JYA99_RS12400 PF07687 Peptidase dimerisation domain JYA99_RS12400 PF01546 Peptidase family M20/M25/M40 JYA99_RS12410 PF02126 Phosphotriesterase family JYA99_RS12415 PF02653 Branched-chain amino acid transport system / permease component JYA99_RS12420 PF00005 ABC transporter JYA99_RS12425 PF00356 Bacterial regulatory proteins, lacI family JYA99_RS12435 PF00294 pfkB family carbohydrate kinase JYA99_RS12455 PF04972 BON domain JYA99_RS12455 PF01476 LysM domain JYA99_RS12460 PF07690 Major Facilitator Superfamily JYA99_RS12470 PF00512 His Kinase A (phospho-acceptor) domain JYA99_RS12470 PF00672 HAMP domain JYA99_RS12470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYA99_RS12475 PF14532 Sigma-54 interaction domain JYA99_RS12475 PF00072 Response regulator receiver domain JYA99_RS12475 PF02954 Bacterial regulatory protein, Fis family JYA99_RS12480 PF13673 Acetyltransferase (GNAT) domain JYA99_RS12480 PF04229 GrpB protein JYA99_RS12485 PF03466 LysR substrate binding domain JYA99_RS12485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYA99_RS12490 PF00248 Aldo/keto reductase family JYA99_RS12495 PF00248 Aldo/keto reductase family JYA99_RS12500 PF08450 SMP-30/Gluconolactonase/LRE-like region JYA99_RS12530 PF04237 YjbR JYA99_RS12550 PF00501 AMP-binding enzyme JYA99_RS12550 PF13193 AMP-binding enzyme C-terminal domain JYA99_RS12555 PF01144 Coenzyme A transferase JYA99_RS12565 PF00108 Thiolase, N-terminal domain JYA99_RS12565 PF02803 Thiolase, C-terminal domain JYA99_RS12570 PF07690 Major Facilitator Superfamily JYA99_RS12575 PF08450 SMP-30/Gluconolactonase/LRE-like region JYA99_RS12585 PF02595 Glycerate kinase family JYA99_RS12590 PF13556 PucR C-terminal helix-turn-helix domain JYA99_RS12590 PF05651 Putative sugar diacid recognition JYA99_RS12590 PF17853 GGDEF-like domain JYA99_RS12595 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JYA99_RS12595 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JYA99_RS12600 PF03466 LysR substrate binding domain JYA99_RS12600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYA99_RS12610 PF07729 FCD domain JYA99_RS12610 PF00392 Bacterial regulatory proteins, gntR family JYA99_RS12615 PF02378 Phosphotransferase system, EIIC JYA99_RS12615 PF00367 phosphotransferase system, EIIB JYA99_RS12620 PF11975 Family 4 glycosyl hydrolase C-terminal domain JYA99_RS12620 PF02056 Family 4 glycosyl hydrolase JYA99_RS12625 PF00083 Sugar (and other) transporter JYA99_RS12630 PF00381 PTS HPr component phosphorylation site JYA99_RS12630 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JYA99_RS12645 PF00756 Putative esterase JYA99_RS12650 PF13188 PAS domain JYA99_RS12650 PF03707 Bacterial signalling protein N terminal repeat JYA99_RS12650 PF00990 Diguanylate cyclase, GGDEF domain JYA99_RS12650 PF00563 EAL domain JYA99_RS12665 PF00557 Metallopeptidase family M24 JYA99_RS12680 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain JYA99_RS12680 PF02753 Pili assembly chaperone PapD, C-terminal domain JYA99_RS12685 PF00577 Outer membrane usher protein JYA99_RS12685 PF13954 PapC N-terminal domain JYA99_RS12685 PF13953 PapC C-terminal domain JYA99_RS12695 PF02638 Glycosyl hydrolase-like 10 JYA99_RS12700 PF07804 HipA-like C-terminal domain JYA99_RS12700 PF13657 HipA N-terminal domain JYA99_RS12705 PF01381 Helix-turn-helix JYA99_RS12710 PF00576 HIUase/Transthyretin family JYA99_RS12715 PF09349 OHCU decarboxylase JYA99_RS12715 PF01014 Uricase JYA99_RS12720 PF00860 Permease family JYA99_RS12725 PF01494 FAD binding domain JYA99_RS12730 PF03466 LysR substrate binding domain JYA99_RS12730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYA99_RS12735 PF00355 Rieske [2Fe-2S] domain JYA99_RS12740 PF00111 2Fe-2S iron-sulfur cluster binding domain JYA99_RS12745 PF07690 Major Facilitator Superfamily JYA99_RS12750 PF12833 Helix-turn-helix domain JYA99_RS12765 PF09905 DNA-binding protein VF530 JYA99_RS12775 PF03180 NLPA lipoprotein JYA99_RS12780 PF00005 ABC transporter JYA99_RS12780 PF09383 NIL domain JYA99_RS12785 PF00528 Binding-protein-dependent transport system inner membrane component JYA99_RS12790 PF03060 Nitronate monooxygenase JYA99_RS12795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYA99_RS12795 PF03466 LysR substrate binding domain JYA99_RS12800 PF06779 Uncharacterised MFS-type transporter YbfB JYA99_RS12810 PF07690 Major Facilitator Superfamily JYA99_RS12820 PF13649 Methyltransferase domain JYA99_RS12835 PF00583 Acetyltransferase (GNAT) family JYA99_RS12840 PF01232 Mannitol dehydrogenase Rossmann domain JYA99_RS12840 PF08125 Mannitol dehydrogenase C-terminal domain JYA99_RS12850 PF00990 Diguanylate cyclase, GGDEF domain JYA99_RS12855 PF13811 Domain of unknown function (DUF4186) JYA99_RS12860 PF04960 Glutaminase JYA99_RS12865 PF00171 Aldehyde dehydrogenase family JYA99_RS12870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYA99_RS12870 PF03466 LysR substrate binding domain JYA99_RS12875 PF00583 Acetyltransferase (GNAT) family JYA99_RS12880 PF00056 lactate/malate dehydrogenase, NAD binding domain JYA99_RS12880 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JYA99_RS12885 PF08220 DeoR-like helix-turn-helix domain JYA99_RS12885 PF00455 DeoR C terminal sensor domain JYA99_RS12890 PF04166 Pyridoxal phosphate biosynthetic protein PdxA JYA99_RS12905 PF00701 Dihydrodipicolinate synthetase family JYA99_RS12910 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JYA99_RS12910 PF01842 ACT domain JYA99_RS12910 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JYA99_RS12915 PF07690 Major Facilitator Superfamily JYA99_RS12920 PF02567 Phenazine biosynthesis-like protein JYA99_RS12925 PF07690 Major Facilitator Superfamily JYA99_RS12930 PF01914 MarC family integral membrane protein JYA99_RS12940 PF01047 MarR family JYA99_RS12945 PF12833 Helix-turn-helix domain JYA99_RS12950 PF13999 MarB protein JYA99_RS12955 PF00892 EamA-like transporter family JYA99_RS12960 PF07690 Major Facilitator Superfamily JYA99_RS12970 PF00005 ABC transporter JYA99_RS12975 PF12399 Branched-chain amino acid ATP-binding cassette transporter JYA99_RS12975 PF00005 ABC transporter JYA99_RS12980 PF02653 Branched-chain amino acid transport system / permease component JYA99_RS12985 PF02653 Branched-chain amino acid transport system / permease component JYA99_RS12990 PF13458 Periplasmic binding protein JYA99_RS12995 PF01717 Cobalamin-independent synthase, Catalytic domain JYA99_RS13005 PF12833 Helix-turn-helix domain JYA99_RS13005 PF01965 DJ-1/PfpI family JYA99_RS13025 PF00356 Bacterial regulatory proteins, lacI family JYA99_RS13030 PF02837 Glycosyl hydrolases family 2, sugar binding domain JYA99_RS13030 PF00703 Glycosyl hydrolases family 2 JYA99_RS13030 PF16353 Domain of unknown function(DUF4981) JYA99_RS13030 PF02836 Glycosyl hydrolases family 2, TIM barrel domain JYA99_RS13030 PF02929 Beta galactosidase small chain JYA99_RS13035 PF01306 LacY proton/sugar symporter JYA99_RS13040 PF02463 RecF/RecN/SMC N terminal domain JYA99_RS13055 PF00455 DeoR C terminal sensor domain JYA99_RS13055 PF08220 DeoR-like helix-turn-helix domain JYA99_RS13060 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JYA99_RS13060 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JYA99_RS13065 PF17042 Nucleotide-binding C-terminal domain JYA99_RS13065 PF07005 Sugar-binding N-terminal domain JYA99_RS13070 PF00596 Class II Aldolase and Adducin N-terminal domain JYA99_RS13075 PF01261 Xylose isomerase-like TIM barrel JYA99_RS13080 PF02447 GntP family permease JYA99_RS13085 PF12833 Helix-turn-helix domain JYA99_RS13100 PF04940 Sensors of blue-light using FAD JYA99_RS13100 PF00563 EAL domain JYA99_RS13105 PF02464 Competence-damaged protein JYA99_RS13110 PF00011 Hsp20/alpha crystallin family JYA99_RS13140 PF02586 SOS response associated peptidase (SRAP) JYA99_RS13145 PF12833 Helix-turn-helix domain JYA99_RS13145 PF02311 AraC-like ligand binding domain JYA99_RS13155 PF01432 Peptidase family M3 JYA99_RS13160 PF00106 short chain dehydrogenase JYA99_RS13165 PF00392 Bacterial regulatory proteins, gntR family JYA99_RS13165 PF07729 FCD domain JYA99_RS13170 PF00582 Universal stress protein family JYA99_RS13175 PF01232 Mannitol dehydrogenase Rossmann domain JYA99_RS13175 PF08125 Mannitol dehydrogenase C-terminal domain JYA99_RS13180 PF07690 Major Facilitator Superfamily JYA99_RS13185 PF02694 Uncharacterised BCR, YnfA/UPF0060 family JYA99_RS13190 PF06932 Protein of unknown function (DUF1283) JYA99_RS13195 PF13302 Acetyltransferase (GNAT) domain JYA99_RS13200 PF06788 Uncharacterised protein family (UPF0257) JYA99_RS13205 PF06649 Protein of unknown function (DUF1161) JYA99_RS13210 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JYA99_RS13210 PF00384 Molybdopterin oxidoreductase JYA99_RS13210 PF01568 Molydopterin dinucleotide binding domain JYA99_RS13215 PF12800 4Fe-4S binding domain JYA99_RS13215 PF13247 4Fe-4S dicluster domain JYA99_RS13220 PF04976 DMSO reductase anchor subunit (DmsC) JYA99_RS13225 PF02613 Nitrate reductase delta subunit JYA99_RS13230 PF00654 Voltage gated chloride channel JYA99_RS13240 PF00480 ROK family JYA99_RS13245 PF03466 LysR substrate binding domain JYA99_RS13245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYA99_RS13250 PF07690 Major Facilitator Superfamily JYA99_RS13255 PF02074 Carboxypeptidase Taq (M32) metallopeptidase JYA99_RS13265 PF00089 Trypsin JYA99_RS13275 PF00893 Small Multidrug Resistance protein JYA99_RS13280 PF00893 Small Multidrug Resistance protein JYA99_RS13285 PF01594 AI-2E family transporter JYA99_RS13290 PF16957 Malonate decarboxylase, alpha subunit, transporter JYA99_RS13295 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase JYA99_RS13300 PF06857 Malonate decarboxylase delta subunit (MdcD) JYA99_RS13305 PF01039 Carboxyl transferase domain JYA99_RS13315 PF03547 Membrane transport protein JYA99_RS13320 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG JYA99_RS13325 PF00698 Acyl transferase domain JYA99_RS13330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYA99_RS13330 PF03466 LysR substrate binding domain JYA99_RS13335 PF06039 Malate:quinone oxidoreductase (Mqo) JYA99_RS13340 PF13580 SIS domain JYA99_RS13350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYA99_RS13350 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain JYA99_RS13350 PF17203 Single cache domain 3 JYA99_RS13350 PF00989 PAS fold JYA99_RS13355 PF00072 Response regulator receiver domain JYA99_RS13360 PF02424 ApbE family JYA99_RS13365 PF00890 FAD binding domain JYA99_RS13365 PF14537 Cytochrome c3 JYA99_RS13370 PF00939 Sodium:sulfate symporter transmembrane region JYA99_RS13375 PF05681 Fumarate hydratase (Fumerase) JYA99_RS13375 PF05683 Fumarase C-terminus JYA99_RS13385 PF02627 Carboxymuconolactone decarboxylase family JYA99_RS13390 PF12146 Serine aminopeptidase, S33 JYA99_RS13395 PF00206 Lyase JYA99_RS13395 PF10397 Adenylosuccinate lyase C-terminus JYA99_RS13400 PF02803 Thiolase, C-terminal domain JYA99_RS13400 PF00108 Thiolase, N-terminal domain JYA99_RS13405 PF01144 Coenzyme A transferase JYA99_RS13410 PF01144 Coenzyme A transferase JYA99_RS13415 PF01614 Bacterial transcriptional regulator JYA99_RS13415 PF09339 IclR helix-turn-helix domain JYA99_RS13420 PF01713 Smr domain JYA99_RS13425 PF03466 LysR substrate binding domain JYA99_RS13425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYA99_RS13430 PF01546 Peptidase family M20/M25/M40 JYA99_RS13430 PF07687 Peptidase dimerisation domain JYA99_RS13435 PF01546 Peptidase family M20/M25/M40 JYA99_RS13440 PF03806 AbgT putative transporter family JYA99_RS13450 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain JYA99_RS13450 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain JYA99_RS13455 PF00027 Cyclic nucleotide-binding domain JYA99_RS13455 PF00325 Bacterial regulatory proteins, crp family JYA99_RS13460 PF00582 Universal stress protein family JYA99_RS13465 PF15930 Domain of unknown function JYA99_RS13470 PF02233 NAD(P) transhydrogenase beta subunit JYA99_RS13475 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch JYA99_RS13475 PF05222 Alanine dehydrogenase/PNT, N-terminal domain JYA99_RS13475 PF01262 Alanine dehydrogenase/PNT, C-terminal domain JYA99_RS13485 PF07338 Protein of unknown function (DUF1471) JYA99_RS13490 PF13520 Amino acid permease JYA99_RS13500 PF06942 GlpM protein JYA99_RS13505 PF00072 Response regulator receiver domain JYA99_RS13505 PF00486 Transcriptional regulatory protein, C terminal JYA99_RS13515 PF00512 His Kinase A (phospho-acceptor) domain JYA99_RS13515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYA99_RS13515 PF00672 HAMP domain JYA99_RS13520 PF05472 DNA replication terminus site-binding protein (Ter protein) JYA99_RS13525 PF10415 Fumarase C C-terminus JYA99_RS13525 PF00206 Lyase JYA99_RS13530 PF05683 Fumarase C-terminus JYA99_RS13530 PF05681 Fumarate hydratase (Fumerase) JYA99_RS13535 PF01238 Phosphomannose isomerase type I JYA99_RS13540 PF06097 Bacterial protein of unknown function (DUF945) JYA99_RS13545 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JYA99_RS13545 PF00356 Bacterial regulatory proteins, lacI family JYA99_RS13550 PF02378 Phosphotransferase system, EIIC JYA99_RS13550 PF00367 phosphotransferase system, EIIB JYA99_RS13555 PF00155 Aminotransferase class I and II JYA99_RS13565 PF14001 YdfZ protein JYA99_RS13580 PF04143 Sulphur transport JYA99_RS13585 PF01206 Sulfurtransferase TusA JYA99_RS13590 PF07166 Protein of unknown function (DUF1398) JYA99_RS13595 PF01679 Proteolipid membrane potential modulator JYA99_RS13600 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JYA99_RS13600 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JYA99_RS13605 PF00171 Aldehyde dehydrogenase family JYA99_RS13615 PF02698 DUF218 domain JYA99_RS13620 PF07690 Major Facilitator Superfamily JYA99_RS13620 PF00083 Sugar (and other) transporter JYA99_RS13625 PF00324 Amino acid permease JYA99_RS13630 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family JYA99_RS13635 PF04996 Succinylarginine dihydrolase JYA99_RS13640 PF00171 Aldehyde dehydrogenase family JYA99_RS13645 PF04958 Arginine N-succinyltransferase beta subunit JYA99_RS13650 PF00202 Aminotransferase class-III JYA99_RS13660 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain JYA99_RS13660 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase JYA99_RS13665 PF00248 Aldo/keto reductase family JYA99_RS13670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYA99_RS13670 PF03466 LysR substrate binding domain JYA99_RS13685 PF13533 Biotin-lipoyl like JYA99_RS13690 PF02321 Outer membrane efflux protein JYA99_RS13695 PF01596 O-methyltransferase JYA99_RS13700 PF11898 Domain of unknown function (DUF3418) JYA99_RS13700 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold JYA99_RS13700 PF00270 DEAD/DEAH box helicase JYA99_RS13700 PF00271 Helicase conserved C-terminal domain JYA99_RS13700 PF04408 Helicase associated domain (HA2) JYA99_RS13705 PF02525 Flavodoxin-like fold JYA99_RS13715 PF00132 Bacterial transferase hexapeptide (six repeats) JYA99_RS13720 PF08223 PaaX-like protein C-terminal domain JYA99_RS13720 PF07848 PaaX-like protein JYA99_RS13725 PF14535 AMP-binding enzyme C-terminal domain JYA99_RS13725 PF00501 AMP-binding enzyme JYA99_RS13730 PF00108 Thiolase, N-terminal domain JYA99_RS13730 PF02803 Thiolase, C-terminal domain JYA99_RS13735 PF03061 Thioesterase superfamily JYA99_RS13740 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain JYA99_RS13740 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JYA99_RS13740 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JYA99_RS13745 PF00378 Enoyl-CoA hydratase/isomerase JYA99_RS13750 PF00378 Enoyl-CoA hydratase/isomerase JYA99_RS13755 PF00111 2Fe-2S iron-sulfur cluster binding domain JYA99_RS13755 PF00175 Oxidoreductase NAD-binding domain JYA99_RS13755 PF00970 Oxidoreductase FAD-binding domain JYA99_RS13760 PF01883 Iron-sulfur cluster assembly protein JYA99_RS13765 PF05138 Phenylacetic acid catabolic protein JYA99_RS13770 PF06243 Phenylacetic acid degradation B JYA99_RS13775 PF05138 Phenylacetic acid catabolic protein JYA99_RS13780 PF00171 Aldehyde dehydrogenase family JYA99_RS13780 PF01575 MaoC like domain JYA99_RS13785 PF02728 Copper amine oxidase, N3 domain JYA99_RS13785 PF01179 Copper amine oxidase, enzyme domain JYA99_RS13785 PF07833 Copper amine oxidase N-terminal domain JYA99_RS13785 PF02727 Copper amine oxidase, N2 domain JYA99_RS13800 PF07687 Peptidase dimerisation domain JYA99_RS13800 PF01546 Peptidase family M20/M25/M40 JYA99_RS13810 PF01042 Endoribonuclease L-PSP JYA99_RS13820 PF03466 LysR substrate binding domain JYA99_RS13820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYA99_RS13825 PF00005 ABC transporter JYA99_RS13830 PF05721 Phytanoyl-CoA dioxygenase (PhyH) JYA99_RS13835 PF00497 Bacterial extracellular solute-binding proteins, family 3 JYA99_RS13850 PF00171 Aldehyde dehydrogenase family JYA99_RS13855 PF12833 Helix-turn-helix domain JYA99_RS13855 PF14525 AraC-binding-like domain JYA99_RS13860 PF07027 Protein of unknown function (DUF1318) JYA99_RS13865 PF13617 YnbE-like lipoprotein JYA99_RS13870 PF11739 Dicarboxylate transport JYA99_RS13875 PF09335 SNARE associated Golgi protein JYA99_RS13880 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JYA99_RS13880 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JYA99_RS13885 PF03724 META domain JYA99_RS13890 PF03891 Domain of unknown function (DUF333) JYA99_RS13895 PF10371 Domain of unknown function JYA99_RS13895 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JYA99_RS13895 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg JYA99_RS13895 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase JYA99_RS13895 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II JYA99_RS13900 PF00267 Gram-negative porin JYA99_RS13910 PF00582 Universal stress protein family JYA99_RS13915 PF01171 PP-loop family JYA99_RS13920 PF00271 Helicase conserved C-terminal domain JYA99_RS13920 PF00270 DEAD/DEAH box helicase JYA99_RS13920 PF03880 DbpA RNA binding domain JYA99_RS13925 PF01544 CorA-like Mg2+ transporter protein JYA99_RS13930 PF00455 DeoR C terminal sensor domain JYA99_RS13930 PF08220 DeoR-like helix-turn-helix domain JYA99_RS13935 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JYA99_RS13935 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JYA99_RS13950 PF00528 Binding-protein-dependent transport system inner membrane component JYA99_RS13955 PF09383 NIL domain JYA99_RS13955 PF00005 ABC transporter JYA99_RS13960 PF03180 NLPA lipoprotein JYA99_RS13965 PF00155 Aminotransferase class I and II JYA99_RS13970 PF08240 Alcohol dehydrogenase GroES-like domain JYA99_RS13970 PF00107 Zinc-binding dehydrogenase JYA99_RS13975 PF00440 Bacterial regulatory proteins, tetR family JYA99_RS13985 PF00753 Metallo-beta-lactamase superfamily JYA99_RS14000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYA99_RS14000 PF03466 LysR substrate binding domain JYA99_RS14025 PF00440 Bacterial regulatory proteins, tetR family JYA99_RS14125 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) JYA99_RS14125 PF04717 Type VI secretion system, phage-baseplate injector JYA99_RS14125 PF13296 Putative type VI secretion system Rhs element Vgr JYA99_RS14130 PF00004 ATPase family associated with various cellular activities (AAA) JYA99_RS14130 PF07724 AAA domain (Cdc48 subfamily) JYA99_RS14130 PF10431 C-terminal, D2-small domain, of ClpB protein JYA99_RS14130 PF17871 AAA lid domain JYA99_RS14140 PF00691 OmpA family JYA99_RS14140 PF13488 Glycine zipper JYA99_RS14155 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath JYA99_RS14165 PF01965 DJ-1/PfpI family JYA99_RS14170 PF01966 HD domain JYA99_RS14180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYA99_RS14180 PF03466 LysR substrate binding domain JYA99_RS14200 PF00248 Aldo/keto reductase family JYA99_RS14205 PF07690 Major Facilitator Superfamily JYA99_RS14210 PF02129 X-Pro dipeptidyl-peptidase (S15 family) JYA99_RS14215 PF03466 LysR substrate binding domain JYA99_RS14215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYA99_RS14225 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JYA99_RS14235 PF00246 Zinc carboxypeptidase JYA99_RS14240 PF13378 Enolase C-terminal domain-like JYA99_RS14240 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JYA99_RS14245 PF08534 Redoxin JYA99_RS14250 PF05145 Transition state regulatory protein AbrB JYA99_RS14255 PF18024 Helix-turn-helix domain JYA99_RS14255 PF00158 Sigma-54 interaction domain JYA99_RS14260 PF11975 Family 4 glycosyl hydrolase C-terminal domain JYA99_RS14260 PF02056 Family 4 glycosyl hydrolase JYA99_RS14265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYA99_RS14265 PF03466 LysR substrate binding domain JYA99_RS14270 PF05128 Domain of unknown function (DUF697) JYA99_RS14275 PF04317 YcjX-like family, DUF463 JYA99_RS14280 PF09584 Phage shock protein PspD (Phageshock_PspD) JYA99_RS14285 PF04024 PspC domain JYA99_RS14290 PF06667 Phage shock protein B JYA99_RS14295 PF04012 PspA/IM30 family JYA99_RS14300 PF00158 Sigma-54 interaction domain JYA99_RS14300 PF02954 Bacterial regulatory protein, Fis family JYA99_RS14305 PF07690 Major Facilitator Superfamily JYA99_RS14310 PF07687 Peptidase dimerisation domain JYA99_RS14310 PF01546 Peptidase family M20/M25/M40 JYA99_RS14315 PF12833 Helix-turn-helix domain JYA99_RS14325 PF13460 NAD(P)H-binding JYA99_RS14330 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JYA99_RS14335 PF00528 Binding-protein-dependent transport system inner membrane component JYA99_RS14340 PF00528 Binding-protein-dependent transport system inner membrane component JYA99_RS14340 PF12911 N-terminal TM domain of oligopeptide transport permease C JYA99_RS14345 PF00005 ABC transporter JYA99_RS14345 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JYA99_RS14350 PF00005 ABC transporter JYA99_RS14355 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin JYA99_RS14360 PF05962 HutD JYA99_RS14375 PF17876 Cold shock domain JYA99_RS14375 PF00773 RNB domain JYA99_RS14375 PF00575 S1 RNA binding domain JYA99_RS14375 PF08206 Ribonuclease B OB domain JYA99_RS14385 PF00455 DeoR C terminal sensor domain JYA99_RS14385 PF08220 DeoR-like helix-turn-helix domain JYA99_RS14390 PF05433 Glycine zipper 2TM domain JYA99_RS14395 PF01253 Translation initiation factor SUI1 JYA99_RS14400 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family JYA99_RS14405 PF18073 Rubredoxin metal binding domain JYA99_RS14410 PF06305 Lipopolysaccharide assembly protein A domain JYA99_RS14415 PF01569 PAP2 superfamily JYA99_RS14420 PF00925 GTP cyclohydrolase II JYA99_RS14425 PF00330 Aconitase family (aconitate hydratase) JYA99_RS14425 PF00694 Aconitase C-terminal domain JYA99_RS14435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYA99_RS14435 PF03466 LysR substrate binding domain JYA99_RS14440 PF08272 Topoisomerase I zinc-ribbon-like JYA99_RS14440 PF01396 Topoisomerase DNA binding C4 zinc finger JYA99_RS14440 PF01751 Toprim domain JYA99_RS14440 PF01131 DNA topoisomerase JYA99_RS14445 PF10692 Protein of unknown function (DUF2498) JYA99_RS14450 PF08496 Peptidase family S49 N-terminal JYA99_RS14450 PF01343 Peptidase family S49 JYA99_RS14460 PF00106 short chain dehydrogenase JYA99_RS14465 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP JYA99_RS14465 PF12557 Cob(I)alamin adenosyltransferase N terminal JYA99_RS14470 PF00849 RNA pseudouridylate synthase JYA99_RS14470 PF01479 S4 domain JYA99_RS14475 PF03466 LysR substrate binding domain JYA99_RS14475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYA99_RS14485 PF01300 Telomere recombination JYA99_RS14490 PF02811 PHP domain JYA99_RS14495 PF04715 Anthranilate synthase component I, N terminal region JYA99_RS14495 PF00425 chorismate binding enzyme JYA99_RS14500 PF00591 Glycosyl transferase family, a/b domain JYA99_RS14500 PF02885 Glycosyl transferase family, helical bundle domain JYA99_RS14500 PF00117 Glutamine amidotransferase class-I JYA99_RS14505 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase JYA99_RS14505 PF00218 Indole-3-glycerol phosphate synthase JYA99_RS14510 PF00291 Pyridoxal-phosphate dependent enzyme JYA99_RS14515 PF00290 Tryptophan synthase alpha chain JYA99_RS14520 PF13660 Domain of unknown function (DUF4147) JYA99_RS14520 PF05161 MOFRL family JYA99_RS14525 PF00180 Isocitrate/isopropylmalate dehydrogenase JYA99_RS14530 PF07690 Major Facilitator Superfamily JYA99_RS14535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYA99_RS14535 PF03466 LysR substrate binding domain JYA99_RS14555 PF00106 short chain dehydrogenase JYA99_RS14560 PF07715 TonB-dependent Receptor Plug Domain JYA99_RS14560 PF00593 TonB dependent receptor JYA99_RS14565 PF13640 2OG-Fe(II) oxygenase superfamily JYA99_RS14565 PF18331 PKHD-type hydroxylase C-terminal domain JYA99_RS14570 PF03922 OmpW family JYA99_RS14575 PF03692 Putative zinc- or iron-chelating domain JYA99_RS14585 PF04279 Intracellular septation protein A JYA99_RS14590 PF00593 TonB dependent receptor JYA99_RS14590 PF07715 TonB-dependent Receptor Plug Domain JYA99_RS14595 PF03061 Thioesterase superfamily JYA99_RS14600 PF14002 YniB-like protein JYA99_RS14605 PF13419 Haloacid dehalogenase-like hydrolase JYA99_RS14615 PF04307 LexA-binding, inner membrane-associated putative hydrolase JYA99_RS14620 PF00375 Sodium:dicarboxylate symporter family JYA99_RS14625 PF10729 Cell division activator CedA JYA99_RS14630 PF18011 C-terminal domain found in long catalases JYA99_RS14630 PF00199 Catalase JYA99_RS14630 PF06628 Catalase-related immune-responsive JYA99_RS14635 PF04794 YdjC-like protein JYA99_RS14640 PF02056 Family 4 glycosyl hydrolase JYA99_RS14640 PF11975 Family 4 glycosyl hydrolase C-terminal domain JYA99_RS14645 PF12833 Helix-turn-helix domain JYA99_RS14645 PF07883 Cupin domain JYA99_RS14650 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit JYA99_RS14655 PF02378 Phosphotransferase system, EIIC JYA99_RS14665 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JYA99_RS14670 PF04355 SmpA / OmlA family JYA99_RS14675 PF02540 NAD synthase JYA99_RS14685 PF07813 LTXXQ motif family protein JYA99_RS14690 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family JYA99_RS14695 PF04996 Succinylarginine dihydrolase JYA99_RS14700 PF00171 Aldehyde dehydrogenase family JYA99_RS14705 PF04958 Arginine N-succinyltransferase beta subunit JYA99_RS14710 PF00202 Aminotransferase class-III JYA99_RS14715 PF03372 Endonuclease/Exonuclease/phosphatase family JYA99_RS14720 PF09335 SNARE associated Golgi protein JYA99_RS14725 PF09335 SNARE associated Golgi protein JYA99_RS14730 PF02627 Carboxymuconolactone decarboxylase family JYA99_RS14735 PF13416 Bacterial extracellular solute-binding protein JYA99_RS14740 PF00528 Binding-protein-dependent transport system inner membrane component JYA99_RS14745 PF00005 ABC transporter JYA99_RS14750 PF00581 Rhodanese-like domain JYA99_RS14755 PF01066 CDP-alcohol phosphatidyltransferase JYA99_RS14760 PF00293 NUDIX domain JYA99_RS14765 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain JYA99_RS14765 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase JYA99_RS14770 PF08240 Alcohol dehydrogenase GroES-like domain JYA99_RS14770 PF16197 Ketoacyl-synthetase C-terminal extension JYA99_RS14770 PF00698 Acyl transferase domain JYA99_RS14770 PF08659 KR domain JYA99_RS14770 PF00550 Phosphopantetheine attachment site JYA99_RS14770 PF14765 Polyketide synthase dehydratase JYA99_RS14770 PF02801 Beta-ketoacyl synthase, C-terminal domain JYA99_RS14770 PF00109 Beta-ketoacyl synthase, N-terminal domain JYA99_RS14775 PF01131 DNA topoisomerase JYA99_RS14775 PF01751 Toprim domain JYA99_RS14780 PF02769 AIR synthase related protein, C-terminal domain JYA99_RS14780 PF00586 AIR synthase related protein, N-terminal domain JYA99_RS14785 PF01569 PAP2 superfamily JYA99_RS14790 PF00881 Nitroreductase family JYA99_RS14795 PF01343 Peptidase family S49 JYA99_RS14800 PF17763 Glutaminase/Asparaginase C-terminal domain JYA99_RS14800 PF00710 Asparaginase, N-terminal JYA99_RS14805 PF00857 Isochorismatase family JYA99_RS14810 PF00704 Glycosyl hydrolases family 18 JYA99_RS14810 PF00041 Fibronectin type III domain JYA99_RS14815 PF01844 HNH endonuclease JYA99_RS14820 PF07023 Protein of unknown function (DUF1315) JYA99_RS14825 PF01641 SelR domain JYA99_RS14830 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JYA99_RS14830 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JYA99_RS14835 PF01263 Aldose 1-epimerase JYA99_RS14840 PF00248 Aldo/keto reductase family JYA99_RS14845 PF06629 MltA-interacting protein MipA JYA99_RS14850 PF08298 PrkA AAA domain JYA99_RS14850 PF06798 PrkA serine protein kinase C-terminal domain JYA99_RS14855 PF04285 Protein of unknown function (DUF444) JYA99_RS14865 PF00255 Glutathione peroxidase JYA99_RS14880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYA99_RS14880 PF03466 LysR substrate binding domain JYA99_RS14885 PF07690 Major Facilitator Superfamily JYA99_RS14895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYA99_RS14895 PF03466 LysR substrate binding domain JYA99_RS14900 PF00817 impB/mucB/samB family JYA99_RS14900 PF13438 Domain of unknown function (DUF4113) JYA99_RS14900 PF11798 IMS family HHH motif JYA99_RS14900 PF11799 impB/mucB/samB family C-terminal domain JYA99_RS14905 PF00717 Peptidase S24-like JYA99_RS14910 PF06183 DinI-like family JYA99_RS14915 PF01075 Glycosyltransferase family 9 (heptosyltransferase) JYA99_RS14920 PF04073 Aminoacyl-tRNA editing domain JYA99_RS14925 PF04284 Protein of unknown function (DUF441) JYA99_RS14930 PF12833 Helix-turn-helix domain JYA99_RS14930 PF02311 AraC-like ligand binding domain JYA99_RS14935 PF07690 Major Facilitator Superfamily JYA99_RS14940 PF06418 CTP synthase N-terminus JYA99_RS14940 PF00117 Glutamine amidotransferase class-I JYA99_RS14945 PF04463 Protein of unknown function (DUF523) JYA99_RS14950 PF04343 Protein of unknown function, DUF488 JYA99_RS14955 PF03891 Domain of unknown function (DUF333) JYA99_RS14960 PF04606 Ogr/Delta-like zinc finger JYA99_RS14970 PF17482 Phage tail sheath C-terminal domain JYA99_RS14970 PF04984 Phage tail sheath protein subtilisin-like domain JYA99_RS15115 PF05840 Bacteriophage replication gene A protein (GPA) JYA99_RS15160 PF00589 Phage integrase family JYA99_RS15160 PF02899 Phage integrase, N-terminal SAM-like domain JYA99_RS15165 PF13185 GAF domain JYA99_RS15165 PF00990 Diguanylate cyclase, GGDEF domain JYA99_RS15185 PF10749 Protein of unknown function (DUF2534) JYA99_RS15190 PF01810 LysE type translocator JYA99_RS15195 PF03279 Bacterial lipid A biosynthesis acyltransferase JYA99_RS15200 PF17763 Glutaminase/Asparaginase C-terminal domain JYA99_RS15200 PF00710 Asparaginase, N-terminal JYA99_RS15205 PF01966 HD domain JYA99_RS15210 PF00990 Diguanylate cyclase, GGDEF domain JYA99_RS15215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYA99_RS15215 PF03466 LysR substrate binding domain JYA99_RS15220 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase JYA99_RS15250 PF02322 Cytochrome bd terminal oxidase subunit II JYA99_RS15255 PF01654 Cytochrome bd terminal oxidase subunit I JYA99_RS15260 PF05067 Manganese containing catalase JYA99_RS15265 PF05974 Domain of unknown function (DUF892) JYA99_RS15270 PF05974 Domain of unknown function (DUF892) JYA99_RS15275 PF10685 Stress-induced bacterial acidophilic repeat motif JYA99_RS15280 PF00107 Zinc-binding dehydrogenase JYA99_RS15280 PF13823 Alcohol dehydrogenase GroES-associated JYA99_RS15280 PF08240 Alcohol dehydrogenase GroES-like domain JYA99_RS15285 PF06906 Protein of unknown function (DUF1272) JYA99_RS15310 PF00180 Isocitrate/isopropylmalate dehydrogenase JYA99_RS15315 PF00563 EAL domain JYA99_RS15315 PF12792 CSS motif domain associated with EAL JYA99_RS15320 PF13737 Transposase DDE domain JYA99_RS15325 PF05230 MASE2 domain JYA99_RS15325 PF00990 Diguanylate cyclase, GGDEF domain JYA99_RS15410 PF01343 Peptidase family S49 JYA99_RS15425 PF03354 Phage Terminase JYA99_RS15470 PF00959 Phage lysozyme JYA99_RS15475 PF04971 Bacteriophage P21 holin S JYA99_RS15495 PF06147 Protein of unknown function (DUF968) JYA99_RS15500 PF01726 LexA DNA binding domain JYA99_RS15500 PF00717 Peptidase S24-like JYA99_RS15510 PF13280 WYL domain JYA99_RS15510 PF08279 HTH domain JYA99_RS15525 PF03707 Bacterial signalling protein N terminal repeat JYA99_RS15525 PF00563 EAL domain JYA99_RS15525 PF00990 Diguanylate cyclase, GGDEF domain JYA99_RS15565 PF06630 Enterobacterial exodeoxyribonuclease VIII JYA99_RS15565 PF12684 PDDEXK-like domain of unknown function (DUF3799) JYA99_RS15570 PF07825 Excisionase-like protein JYA99_RS15575 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain JYA99_RS15575 PF00589 Phage integrase family JYA99_RS15580 PF00180 Isocitrate/isopropylmalate dehydrogenase JYA99_RS15585 PF00849 RNA pseudouridylate synthase JYA99_RS15590 PF00293 NUDIX domain JYA99_RS15600 PF04356 Protein of unknown function (DUF489) JYA99_RS15605 PF00206 Lyase JYA99_RS15605 PF08328 Adenylosuccinate lyase C-terminal JYA99_RS15620 PF00072 Response regulator receiver domain JYA99_RS15620 PF00486 Transcriptional regulatory protein, C terminal JYA99_RS15625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYA99_RS15625 PF08918 PhoQ Sensor JYA99_RS15630 PF08007 Cupin superfamily protein JYA99_RS15635 PF07687 Peptidase dimerisation domain JYA99_RS15635 PF01546 Peptidase family M20/M25/M40 JYA99_RS15640 PF08402 TOBE domain JYA99_RS15640 PF00005 ABC transporter JYA99_RS15645 PF00528 Binding-protein-dependent transport system inner membrane component JYA99_RS15650 PF00528 Binding-protein-dependent transport system inner membrane component JYA99_RS15655 PF13416 Bacterial extracellular solute-binding protein JYA99_RS15665 PF00501 AMP-binding enzyme JYA99_RS15665 PF13193 AMP-binding enzyme C-terminal domain JYA99_RS15670 PF02779 Transketolase, pyrimidine binding domain JYA99_RS15670 PF00456 Transketolase, thiamine diphosphate binding domain JYA99_RS15670 PF02780 Transketolase, C-terminal domain JYA99_RS15675 PF00923 Transaldolase/Fructose-6-phosphate aldolase JYA99_RS15680 PF02502 Ribose/Galactose Isomerase JYA99_RS15685 PF03829 PTS system glucitol/sorbitol-specific IIA component JYA99_RS15690 PF03812 2-keto-3-deoxygluconate permease JYA99_RS15695 PF17042 Nucleotide-binding C-terminal domain JYA99_RS15695 PF07005 Sugar-binding N-terminal domain JYA99_RS15700 PF04166 Pyridoxal phosphate biosynthetic protein PdxA JYA99_RS15705 PF00121 Triosephosphate isomerase JYA99_RS15710 PF04198 Putative sugar-binding domain JYA99_RS15720 PF02146 Sir2 family JYA99_RS15725 PF00480 ROK family JYA99_RS15730 PF02687 FtsX-like permease family JYA99_RS15730 PF12704 MacB-like periplasmic core domain JYA99_RS15735 PF00005 ABC transporter JYA99_RS15740 PF12704 MacB-like periplasmic core domain JYA99_RS15740 PF02687 FtsX-like permease family JYA99_RS15750 PF17757 UvrB interaction domain JYA99_RS15750 PF03461 TRCF domain JYA99_RS15750 PF00271 Helicase conserved C-terminal domain JYA99_RS15750 PF00270 DEAD/DEAH box helicase JYA99_RS15750 PF02559 CarD-like/TRCF domain JYA99_RS15755 PF03734 L,D-transpeptidase catalytic domain JYA99_RS15755 PF17969 L,D-transpeptidase C-terminal domain JYA99_RS15755 PF01476 LysM domain JYA99_RS15760 PF07338 Protein of unknown function (DUF1471) JYA99_RS15770 PF00440 Bacterial regulatory proteins, tetR family JYA99_RS15780 PF00593 TonB dependent receptor JYA99_RS15780 PF07715 TonB-dependent Receptor Plug Domain JYA99_RS15785 PF05433 Glycine zipper 2TM domain JYA99_RS15790 PF07992 Pyridine nucleotide-disulphide oxidoreductase JYA99_RS15795 PF05728 Uncharacterised protein family (UPF0227) JYA99_RS15800 PF00933 Glycosyl hydrolase family 3 N terminal domain JYA99_RS15805 PF01636 Phosphotransferase enzyme family JYA99_RS15810 PF13036 Peptidoglycan-synthase activator LpoB JYA99_RS15815 PF07233 Protein of unknown function (DUF1425) JYA99_RS15820 PF01230 HIT domain JYA99_RS15825 PF00367 phosphotransferase system, EIIB JYA99_RS15825 PF02378 Phosphotransferase system, EIIC JYA99_RS15830 PF01026 TatD related DNase JYA99_RS15835 PF09115 DNA polymerase III, delta subunit, C terminal JYA99_RS15840 PF02223 Thymidylate kinase JYA99_RS15845 PF02618 YceG-like family JYA99_RS15850 PF01063 Amino-transferase class IV JYA99_RS15855 PF00109 Beta-ketoacyl synthase, N-terminal domain JYA99_RS15855 PF02801 Beta-ketoacyl synthase, C-terminal domain JYA99_RS15860 PF00550 Phosphopantetheine attachment site JYA99_RS15870 PF00698 Acyl transferase domain JYA99_RS15875 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JYA99_RS15875 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JYA99_RS15880 PF02504 Fatty acid synthesis protein JYA99_RS15885 PF01783 Ribosomal L32p protein family JYA99_RS15890 PF02620 Large ribosomal RNA subunit accumulation protein YceD JYA99_RS15895 PF02545 Maf-like protein JYA99_RS15900 PF01479 S4 domain JYA99_RS15900 PF00849 RNA pseudouridylate synthase JYA99_RS15910 PF12111 Polyribonucleotide phosphorylase C terminal JYA99_RS15910 PF10150 Ribonuclease E/G family JYA99_RS15910 PF00575 S1 RNA binding domain JYA99_RS15915 PF03466 LysR substrate binding domain JYA99_RS15915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYA99_RS15920 PF07690 Major Facilitator Superfamily JYA99_RS15925 PF03023 Lipid II flippase MurJ JYA99_RS15930 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JYA99_RS15935 PF04337 Protein of unknown function, DUF480 JYA99_RS15940 PF13302 Acetyltransferase (GNAT) domain JYA99_RS15945 PF07690 Major Facilitator Superfamily JYA99_RS15950 PF07273 Protein of unknown function (DUF1439) JYA99_RS15955 PF01979 Amidohydrolase family JYA99_RS15960 PF06183 DinI-like family JYA99_RS15965 PF13991 BssS protein family JYA99_RS15970 PF01266 FAD dependent oxidoreductase JYA99_RS15975 PF10968 Protein of unknown function (DUF2770) JYA99_RS15980 PF17773 UPF0176 acylphosphatase like domain JYA99_RS15980 PF12368 Rhodanase C-terminal JYA99_RS15980 PF00581 Rhodanese-like domain JYA99_RS15985 PF03279 Bacterial lipid A biosynthesis acyltransferase JYA99_RS15990 PF07690 Major Facilitator Superfamily JYA99_RS15995 PF13984 MsyB protein JYA99_RS16000 PF07119 Protein of unknown function (DUF1375) JYA99_RS16005 PF00535 Glycosyl transferase family 2 JYA99_RS16010 PF04349 Periplasmic glucan biosynthesis protein, MdoG JYA99_RS16015 PF01757 Acyltransferase family JYA99_RS16020 PF00440 Bacterial regulatory proteins, tetR family JYA99_RS16020 PF13977 BetI-type transcriptional repressor, C-terminal JYA99_RS16025 PF01661 Macro domain JYA99_RS16030 PF06496 Protein of unknown function (DUF1097) JYA99_RS16035 PF02613 Nitrate reductase delta subunit JYA99_RS16040 PF02811 PHP domain JYA99_RS16045 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JYA99_RS16065 PF00440 Bacterial regulatory proteins, tetR family JYA99_RS16070 PF03466 LysR substrate binding domain JYA99_RS16070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYA99_RS16075 PF02678 Pirin JYA99_RS16075 PF05726 Pirin C-terminal cupin domain JYA99_RS16080 PF00857 Isochorismatase family JYA99_RS16095 PF02562 PhoH-like protein JYA99_RS16100 PF04261 Dyp-type peroxidase family JYA99_RS16105 PF13473 Cupredoxin-like domain JYA99_RS16105 PF09375 Imelysin JYA99_RS16110 PF03239 Iron permease FTR1 family JYA99_RS16115 PF07662 Na+ dependent nucleoside transporter C-terminus JYA99_RS16115 PF07670 Nucleoside recognition JYA99_RS16115 PF01773 Na+ dependent nucleoside transporter N-terminus JYA99_RS16125 PF00474 Sodium:solute symporter family JYA99_RS16130 PF14850 DNA-binding domain of Proline dehydrogenase JYA99_RS16130 PF18327 Proline utilization A proline dehydrogenase N-terminal domain JYA99_RS16130 PF01619 Proline dehydrogenase JYA99_RS16130 PF00171 Aldehyde dehydrogenase family JYA99_RS16140 PF08362 YcdC-like protein, C-terminal region JYA99_RS16140 PF00440 Bacterial regulatory proteins, tetR family JYA99_RS16145 PF00296 Luciferase-like monooxygenase JYA99_RS16150 PF00857 Isochorismatase family JYA99_RS16155 PF01042 Endoribonuclease L-PSP JYA99_RS16160 PF00561 alpha/beta hydrolase fold JYA99_RS16165 PF00881 Nitroreductase family JYA99_RS16170 PF01613 Flavin reductase like domain JYA99_RS16175 PF00860 Permease family JYA99_RS16185 PF10685 Stress-induced bacterial acidophilic repeat motif JYA99_RS16195 PF03358 NADPH-dependent FMN reductase JYA99_RS16200 PF13993 YccJ-like protein JYA99_RS16205 PF00328 Histidine phosphatase superfamily (branch 2) JYA99_RS16210 PF01638 HxlR-like helix-turn-helix JYA99_RS16230 PF00324 Amino acid permease JYA99_RS16235 PF00120 Glutamine synthetase, catalytic domain JYA99_RS16240 PF07722 Peptidase C26 JYA99_RS16245 PF07883 Cupin domain JYA99_RS16245 PF01381 Helix-turn-helix JYA99_RS16250 PF00171 Aldehyde dehydrogenase family JYA99_RS16255 PF01266 FAD dependent oxidoreductase JYA99_RS16260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYA99_RS16260 PF03466 LysR substrate binding domain JYA99_RS16265 PF00180 Isocitrate/isopropylmalate dehydrogenase JYA99_RS16270 PF02028 BCCT, betaine/carnitine/choline family transporter JYA99_RS16275 PF00355 Rieske [2Fe-2S] domain JYA99_RS16275 PF00848 Ring hydroxylating alpha subunit (catalytic domain) JYA99_RS16280 PF00171 Aldehyde dehydrogenase family JYA99_RS16285 PF00175 Oxidoreductase NAD-binding domain JYA99_RS16285 PF00111 2Fe-2S iron-sulfur cluster binding domain JYA99_RS16285 PF00970 Oxidoreductase FAD-binding domain JYA99_RS16305 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JYA99_RS16310 PF01027 Inhibitor of apoptosis-promoting Bax1 JYA99_RS16315 PF04358 DsrC like protein JYA99_RS16320 PF00708 Acylphosphatase JYA99_RS16325 PF12833 Helix-turn-helix domain JYA99_RS16330 PF01161 Phosphatidylethanolamine-binding protein JYA99_RS16335 PF10672 S-adenosylmethionine-dependent methyltransferase JYA99_RS16335 PF17785 PUA-like domain JYA99_RS16340 PF08755 Hemimethylated DNA-binding protein YccV like JYA99_RS16345 PF13380 CoA binding domain JYA99_RS16350 PF02142 MGS-like domain JYA99_RS16355 PF13361 UvrD-like helicase C-terminal domain JYA99_RS16355 PF12462 DNA helicase IV / RNA helicase N terminal JYA99_RS16355 PF00580 UvrD/REP helicase N-terminal domain JYA99_RS16360 PF03733 Inner membrane component domain JYA99_RS16365 PF12805 FUSC-like inner membrane protein yccS JYA99_RS16370 PF04994 TfoX C-terminal domain JYA99_RS16370 PF04993 TfoX N-terminal domain JYA99_RS16375 PF03846 Cell division inhibitor SulA JYA99_RS16380 PF01389 OmpA-like transmembrane domain JYA99_RS16380 PF00691 OmpA family JYA99_RS16385 PF06303 MatP N-terminal domain JYA99_RS16385 PF17414 MatP C-terminal ribbon-helix-helix domain JYA99_RS16390 PF13654 AAA domain JYA99_RS16390 PF05362 Lon protease (S16) C-terminal proteolytic domain JYA99_RS16395 PF07977 FabA-like domain JYA99_RS16400 PF04957 Ribosome modulation factor JYA99_RS16405 PF03886 ABC-type transport auxiliary lipoprotein component JYA99_RS16410 PF02470 MlaD protein JYA99_RS16415 PF04403 Paraquat-inducible protein A JYA99_RS16420 PF16326 ABC transporter C-terminal domain JYA99_RS16420 PF12848 ABC transporter JYA99_RS16420 PF00005 ABC transporter JYA99_RS16425 PF01170 Putative RNA methylase family UPF0020 JYA99_RS16425 PF02926 THUMP domain JYA99_RS16425 PF10672 S-adenosylmethionine-dependent methyltransferase JYA99_RS16430 PF03473 MOSC domain JYA99_RS16430 PF00111 2Fe-2S iron-sulfur cluster binding domain JYA99_RS16430 PF03476 MOSC N-terminal beta barrel domain JYA99_RS16435 PF07126 Cell-division protein ZapC JYA99_RS16440 PF01180 Dihydroorotate dehydrogenase JYA99_RS16445 PF03358 NADPH-dependent FMN reductase JYA99_RS16450 PF09084 NMT1/THI5 like JYA99_RS16455 PF00296 Luciferase-like monooxygenase JYA99_RS16460 PF00528 Binding-protein-dependent transport system inner membrane component JYA99_RS16465 PF00005 ABC transporter JYA99_RS16470 PF01433 Peptidase family M1 domain JYA99_RS16470 PF17432 Domain of unknown function (DUF3458_C) ARM repeats JYA99_RS16470 PF11940 Domain of unknown function (DUF3458) Ig-like fold JYA99_RS16475 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain JYA99_RS16475 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family JYA99_RS16480 PF07687 Peptidase dimerisation domain JYA99_RS16480 PF01546 Peptidase family M20/M25/M40 JYA99_RS16485 PF01546 Peptidase family M20/M25/M40 JYA99_RS16485 PF07687 Peptidase dimerisation domain JYA99_RS16495 PF00291 Pyridoxal-phosphate dependent enzyme JYA99_RS16505 PF00152 tRNA synthetases class II (D, K and N) JYA99_RS16505 PF01336 OB-fold nucleic acid binding domain JYA99_RS16510 PF00267 Gram-negative porin JYA99_RS16515 PF00155 Aminotransferase class I and II JYA99_RS16520 PF00753 Metallo-beta-lactamase superfamily JYA99_RS16525 PF05951 Bacterial protein of unknown function (DUF882) JYA99_RS16530 PF01471 Putative peptidoglycan binding domain JYA99_RS16530 PF03734 L,D-transpeptidase catalytic domain JYA99_RS16535 PF16330 MukB hinge domain JYA99_RS16535 PF04310 MukB N-terminal JYA99_RS16540 PF04288 MukE-like family JYA99_RS16545 PF03882 MukF winged-helix domain JYA99_RS16545 PF17193 MukF C-terminal domain JYA99_RS16545 PF17192 MukF middle domain JYA99_RS16550 PF13847 Methyltransferase domain JYA99_RS16555 PF02698 DUF218 domain JYA99_RS16560 PF01636 Phosphotransferase enzyme family JYA99_RS16565 PF02348 Cytidylyltransferase JYA99_RS16570 PF03966 Trm112p-like protein JYA99_RS16575 PF06224 Winged helix DNA-binding domain JYA99_RS16580 PF02606 Tetraacyldisaccharide-1-P 4'-kinase JYA99_RS16585 PF00664 ABC transporter transmembrane region JYA99_RS16585 PF00005 ABC transporter JYA99_RS16590 PF00753 Metallo-beta-lactamase superfamily JYA99_RS16590 PF03772 Competence protein JYA99_RS16595 PF00216 Bacterial DNA-binding protein JYA99_RS16600 PF00575 S1 RNA binding domain JYA99_RS16605 PF02224 Cytidylate kinase JYA99_RS16610 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JYA99_RS16615 PF00266 Aminotransferase class-V JYA99_RS16620 PF04239 Protein of unknown function (DUF421) JYA99_RS16625 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding JYA99_RS16625 PF18381 YcaO cyclodehydratase C-terminal domain JYA99_RS16630 PF01226 Formate/nitrite transporter JYA99_RS16635 PF02901 Pyruvate formate lyase-like JYA99_RS16635 PF01228 Glycine radical JYA99_RS16640 PF04055 Radical SAM superfamily JYA99_RS16645 PF07690 Major Facilitator Superfamily JYA99_RS16650 PF04976 DMSO reductase anchor subunit (DmsC) JYA99_RS16655 PF13247 4Fe-4S dicluster domain JYA99_RS16655 PF12800 4Fe-4S binding domain JYA99_RS16660 PF01568 Molydopterin dinucleotide binding domain JYA99_RS16660 PF00384 Molybdopterin oxidoreductase JYA99_RS16660 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JYA99_RS16665 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JYA99_RS16665 PF02403 Seryl-tRNA synthetase N-terminal domain JYA99_RS16670 PF16193 AAA C-terminal domain JYA99_RS16670 PF00004 ATPase family associated with various cellular activities (AAA) JYA99_RS16670 PF12002 MgsA AAA+ ATPase C terminal JYA99_RS16675 PF03548 Outer membrane lipoprotein carrier protein LolA JYA99_RS16680 PF17854 FtsK alpha domain JYA99_RS16680 PF01580 FtsK/SpoIIIE family JYA99_RS16680 PF13491 4TM region of DNA translocase FtsK/SpoIIIE JYA99_RS16680 PF09397 Ftsk gamma domain JYA99_RS16685 PF01037 Lrp/AsnC ligand binding domain JYA99_RS16690 PF07992 Pyridine nucleotide-disulphide oxidoreductase JYA99_RS16695 PF00005 ABC transporter JYA99_RS16695 PF00664 ABC transporter transmembrane region JYA99_RS16700 PF00664 ABC transporter transmembrane region JYA99_RS16700 PF00005 ABC transporter JYA99_RS16705 PF03588 Leucyl/phenylalanyl-tRNA protein transferase JYA99_RS16710 PF01176 Translation initiation factor 1A / IF-1 JYA99_RS16715 PF10431 C-terminal, D2-small domain, of ClpB protein JYA99_RS16715 PF07724 AAA domain (Cdc48 subfamily) JYA99_RS16715 PF02861 Clp amino terminal domain, pathogenicity island component JYA99_RS16715 PF17871 AAA lid domain JYA99_RS16715 PF00004 ATPase family associated with various cellular activities (AAA) JYA99_RS16720 PF02617 ATP-dependent Clp protease adaptor protein ClpS JYA99_RS16725 PF00313 'Cold-shock' DNA-binding domain JYA99_RS16730 PF02687 FtsX-like permease family JYA99_RS16730 PF12704 MacB-like periplasmic core domain JYA99_RS16730 PF00005 ABC transporter JYA99_RS16735 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JYA99_RS16740 PF11398 Protein of unknown function (DUF2813) JYA99_RS16745 PF00230 Major intrinsic protein JYA99_RS16750 PF03956 Lysine exporter LysO JYA99_RS16755 PF03063 Prismane/CO dehydrogenase family JYA99_RS16760 PF00175 Oxidoreductase NAD-binding domain JYA99_RS16760 PF00111 2Fe-2S iron-sulfur cluster binding domain JYA99_RS16760 PF00970 Oxidoreductase FAD-binding domain JYA99_RS16770 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JYA99_RS16770 PF00205 Thiamine pyrophosphate enzyme, central domain JYA99_RS16770 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JYA99_RS16775 PF01212 Beta-eliminating lyase JYA99_RS16780 PF11066 Protein of unknown function (DUF2867) JYA99_RS16780 PF13460 NAD(P)H-binding JYA99_RS16785 PF01370 NAD dependent epimerase/dehydratase family JYA99_RS16790 PF01510 N-acetylmuramoyl-L-alanine amidase JYA99_RS16795 PF00563 EAL domain JYA99_RS16795 PF01590 GAF domain JYA99_RS16795 PF00990 Diguanylate cyclase, GGDEF domain JYA99_RS16795 PF00360 Phytochrome region JYA99_RS16800 PF12883 Protein of unknown function (DUF3828) JYA99_RS16805 PF00005 ABC transporter JYA99_RS16810 PF00497 Bacterial extracellular solute-binding proteins, family 3 JYA99_RS16815 PF00528 Binding-protein-dependent transport system inner membrane component JYA99_RS16820 PF00528 Binding-protein-dependent transport system inner membrane component JYA99_RS16825 PF00497 Bacterial extracellular solute-binding proteins, family 3 JYA99_RS16830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYA99_RS16830 PF16736 Single Cache-like JYA99_RS16830 PF00989 PAS fold JYA99_RS16830 PF00512 His Kinase A (phospho-acceptor) domain JYA99_RS16835 PF00072 Response regulator receiver domain JYA99_RS16835 PF00486 Transcriptional regulatory protein, C terminal JYA99_RS16840 PF05958 tRNA (Uracil-5-)-methyltransferase JYA99_RS16845 PF10767 Protein of unknown function (DUF2593) JYA99_RS16850 PF00528 Binding-protein-dependent transport system inner membrane component JYA99_RS16855 PF00528 Binding-protein-dependent transport system inner membrane component JYA99_RS16860 PF08402 TOBE domain JYA99_RS16860 PF00005 ABC transporter JYA99_RS16865 PF13416 Bacterial extracellular solute-binding protein JYA99_RS16870 PF10722 Putative bacterial sensory transduction regulator JYA99_RS16875 PF08443 RimK-like ATP-grasp domain JYA99_RS16875 PF18030 RimK PreATP-grasp domain JYA99_RS16880 PF00881 Nitroreductase family JYA99_RS16885 PF07214 Protein of unknown function (DUF1418) JYA99_RS16890 PF00462 Glutaredoxin JYA99_RS16895 PF11045 Putative inner membrane protein of Enterobacteriaceae JYA99_RS16900 PF02080 TrkA-C domain JYA99_RS16900 PF06826 Predicted Permease Membrane Region JYA99_RS16905 PF00440 Bacterial regulatory proteins, tetR family JYA99_RS16910 PF07690 Major Facilitator Superfamily JYA99_RS16920 PF07690 Major Facilitator Superfamily JYA99_RS16925 PF01569 PAP2 superfamily JYA99_RS16930 PF08220 DeoR-like helix-turn-helix domain JYA99_RS16930 PF00455 DeoR C terminal sensor domain JYA99_RS16935 PF07943 Penicillin-binding protein 5, C-terminal domain JYA99_RS16935 PF00768 D-alanyl-D-alanine carboxypeptidase JYA99_RS16945 PF00043 Glutathione S-transferase, C-terminal domain JYA99_RS16945 PF13417 Glutathione S-transferase, N-terminal domain JYA99_RS16950 PF07995 Glucose / Sorbosone dehydrogenase JYA99_RS16955 PF10799 Biofilm formation protein (YliH/bssR) JYA99_RS16960 PF01306 LacY proton/sugar symporter JYA99_RS16965 PF18693 TRAM domain JYA99_RS16965 PF04055 Radical SAM superfamily JYA99_RS16965 PF00919 Uncharacterized protein family UPF0004 JYA99_RS16970 PF00528 Binding-protein-dependent transport system inner membrane component JYA99_RS16970 PF12911 N-terminal TM domain of oligopeptide transport permease C JYA99_RS16975 PF00528 Binding-protein-dependent transport system inner membrane component JYA99_RS16980 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JYA99_RS16985 PF00005 ABC transporter JYA99_RS16985 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JYA99_RS16990 PF01112 Asparaginase JYA99_RS16995 PF00994 Probable molybdopterin binding domain JYA99_RS16995 PF03453 MoeA N-terminal region (domain I and II) JYA99_RS16995 PF03454 MoeA C-terminal region (domain IV) JYA99_RS17000 PF00899 ThiF family JYA99_RS17005 PF04055 Radical SAM superfamily JYA99_RS17010 PF02901 Pyruvate formate lyase-like JYA99_RS17010 PF01228 Glycine radical JYA99_RS17020 PF07350 Protein of unknown function (DUF1479) JYA99_RS17025 PF00356 Bacterial regulatory proteins, lacI family JYA99_RS17030 PF07690 Major Facilitator Superfamily JYA99_RS17035 PF13802 Galactose mutarotase-like JYA99_RS17035 PF17137 Domain of unknown function (DUF5110) JYA99_RS17035 PF01055 Glycosyl hydrolases family 31 JYA99_RS17035 PF16338 Domain of unknown function (DUF4968) JYA99_RS17040 PF00005 ABC transporter JYA99_RS17040 PF12848 ABC transporter JYA99_RS17045 PF13350 Tyrosine phosphatase family JYA99_RS17050 PF03734 L,D-transpeptidase catalytic domain JYA99_RS17050 PF17969 L,D-transpeptidase C-terminal domain JYA99_RS17055 PF07702 UTRA domain JYA99_RS17055 PF00392 Bacterial regulatory proteins, gntR family JYA99_RS17060 PF00232 Glycosyl hydrolase family 1 JYA99_RS17065 PF03600 Citrate transporter JYA99_RS17070 PF01325 Iron dependent repressor, N-terminal DNA binding domain JYA99_RS17070 PF02742 Iron dependent repressor, metal binding and dimerisation domain JYA99_RS17080 PF00884 Sulfatase JYA99_RS17085 PF13505 Outer membrane protein beta-barrel domain JYA99_RS17090 PF00892 EamA-like transporter family JYA99_RS17095 PF00210 Ferritin-like domain JYA99_RS17100 PF00497 Bacterial extracellular solute-binding proteins, family 3 JYA99_RS17105 PF00528 Binding-protein-dependent transport system inner membrane component JYA99_RS17110 PF00005 ABC transporter JYA99_RS17115 PF00924 Mechanosensitive ion channel JYA99_RS17120 PF05971 RNA methyltransferase JYA99_RS17125 PF01613 Flavin reductase like domain JYA99_RS17135 PF01258 Prokaryotic dksA/traR C4-type zinc finger JYA99_RS17140 PF07338 Protein of unknown function (DUF1471) JYA99_RS17145 PF02885 Glycosyl transferase family, helical bundle domain JYA99_RS17150 PF00270 DEAD/DEAH box helicase JYA99_RS17150 PF06733 DEAD_2 JYA99_RS17150 PF13307 Helicase C-terminal domain JYA99_RS17155 PF00270 DEAD/DEAH box helicase JYA99_RS17155 PF00271 Helicase conserved C-terminal domain JYA99_RS17160 PF02779 Transketolase, pyrimidine binding domain JYA99_RS17160 PF02780 Transketolase, C-terminal domain JYA99_RS17165 PF00456 Transketolase, thiamine diphosphate binding domain JYA99_RS17175 PF07690 Major Facilitator Superfamily JYA99_RS17185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYA99_RS17185 PF03466 LysR substrate binding domain JYA99_RS17190 PF09209 Tetracyclin repressor-like, C-terminal domain JYA99_RS17190 PF00440 Bacterial regulatory proteins, tetR family JYA99_RS17195 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JYA99_RS17200 PF00005 ABC transporter JYA99_RS17215 PF11076 Putative inner membrane protein YbhQ JYA99_RS17220 PF03372 Endonuclease/Exonuclease/phosphatase family JYA99_RS17225 PF13091 PLD-like domain JYA99_RS17230 PF03706 Lysylphosphatidylglycerol synthase TM region JYA99_RS17235 PF01027 Inhibitor of apoptosis-promoting Bax1 JYA99_RS17240 PF02391 MoaE protein JYA99_RS17245 PF02597 ThiS family JYA99_RS17250 PF01967 MoaC family JYA99_RS17255 PF00994 Probable molybdopterin binding domain JYA99_RS17260 PF04055 Radical SAM superfamily JYA99_RS17260 PF06463 Molybdenum Cofactor Synthesis C JYA99_RS17265 PF01933 Uncharacterised protein family UPF0052 JYA99_RS17270 PF08019 Phosphoethanolamine transferase EptA/EptB JYA99_RS17270 PF00884 Sulfatase JYA99_RS17275 PF00072 Response regulator receiver domain JYA99_RS17275 PF00486 Transcriptional regulatory protein, C terminal JYA99_RS17280 PF00512 His Kinase A (phospho-acceptor) domain JYA99_RS17280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYA99_RS17285 PF12344 Ultra-violet resistance protein B JYA99_RS17285 PF17757 UvrB interaction domain JYA99_RS17285 PF00271 Helicase conserved C-terminal domain JYA99_RS17285 PF04851 Type III restriction enzyme, res subunit JYA99_RS17285 PF02151 UvrB/uvrC motif JYA99_RS17295 PF00005 ABC transporter JYA99_RS17305 PF08241 Methyltransferase domain JYA99_RS17310 PF00155 Aminotransferase class I and II JYA99_RS17315 PF06968 Biotin and Thiamin Synthesis associated domain JYA99_RS17315 PF04055 Radical SAM superfamily JYA99_RS17320 PF00202 Aminotransferase class-III JYA99_RS17325 PF01161 Phosphatidylethanolamine-binding protein JYA99_RS17330 PF00324 Amino acid permease JYA99_RS17335 PF00221 Aromatic amino acid lyase JYA99_RS17340 PF17391 Urocanase N-terminal domain JYA99_RS17340 PF17392 Urocanase C-terminal domain JYA99_RS17340 PF01175 Urocanase Rossmann-like domain JYA99_RS17350 PF07702 UTRA domain JYA99_RS17350 PF00392 Bacterial regulatory proteins, gntR family JYA99_RS17355 PF00491 Arginase family JYA99_RS17360 PF01979 Amidohydrolase family JYA99_RS17365 PF01095 Pectinesterase JYA99_RS17375 PF00689 Cation transporting ATPase, C-terminus JYA99_RS17375 PF00690 Cation transporter/ATPase, N-terminus JYA99_RS17380 PF00582 Universal stress protein family JYA99_RS17385 PF13533 Biotin-lipoyl like JYA99_RS17390 PF00873 AcrB/AcrD/AcrF family JYA99_RS17420 PF13411 MerR HTH family regulatory protein JYA99_RS17425 PF04940 Sensors of blue-light using FAD JYA99_RS17425 PF00563 EAL domain JYA99_RS17430 PF10798 Biofilm development protein YmgB/AriR JYA99_RS17440 PF10798 Biofilm development protein YmgB/AriR JYA99_RS17445 PF10282 Lactonase, 7-bladed beta-propeller JYA99_RS17455 PF00005 ABC transporter JYA99_RS17455 PF03459 TOBE domain JYA99_RS17460 PF00528 Binding-protein-dependent transport system inner membrane component JYA99_RS17470 PF10766 Multidrug efflux pump-associated protein AcrZ JYA99_RS17475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYA99_RS17475 PF03459 TOBE domain JYA99_RS17480 PF00005 ABC transporter JYA99_RS17485 PF16363 GDP-mannose 4,6 dehydratase JYA99_RS17490 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain JYA99_RS17490 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain JYA99_RS17495 PF10509 Galactokinase galactose-binding signature JYA99_RS17495 PF08544 GHMP kinases C terminal JYA99_RS17495 PF00288 GHMP kinases N terminal domain JYA99_RS17500 PF01263 Aldose 1-epimerase JYA99_RS17505 PF00300 Histidine phosphatase superfamily (branch 1) JYA99_RS17510 PF00793 DAHP synthetase I family JYA99_RS17515 PF13985 YbgS-like protein JYA99_RS17520 PF01545 Cation efflux family JYA99_RS17525 PF04973 Nicotinamide mononucleotide transporter JYA99_RS17530 PF02445 Quinolinate synthetase A protein JYA99_RS17580 PF13174 Tetratricopeptide repeat JYA99_RS17580 PF16331 TolA binding protein trimerisation JYA99_RS17585 PF00691 OmpA family JYA99_RS17590 PF04052 TolB amino-terminal domain JYA99_RS17590 PF07676 WD40-like Beta Propeller Repeat JYA99_RS17595 PF06519 TolA C-terminal JYA99_RS17600 PF02472 Biopolymer transport protein ExbD/TolR JYA99_RS17605 PF01618 MotA/TolQ/ExbB proton channel family JYA99_RS17610 PF03061 Thioesterase superfamily JYA99_RS17615 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) JYA99_RS17620 PF08173 Membrane bound YbgT-like protein JYA99_RS17625 PF02322 Cytochrome bd terminal oxidase subunit II JYA99_RS17630 PF01654 Cytochrome bd terminal oxidase subunit I JYA99_RS17635 PF02629 CoA binding domain JYA99_RS17635 PF00549 CoA-ligase JYA99_RS17640 PF08442 ATP-grasp domain JYA99_RS17640 PF00549 CoA-ligase JYA99_RS17645 PF00364 Biotin-requiring enzyme JYA99_RS17645 PF02817 e3 binding domain JYA99_RS17645 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JYA99_RS17650 PF02779 Transketolase, pyrimidine binding domain JYA99_RS17650 PF16078 2-oxoglutarate dehydrogenase N-terminus JYA99_RS17650 PF00676 Dehydrogenase E1 component JYA99_RS17650 PF16870 2-oxoglutarate dehydrogenase C-terminal JYA99_RS17655 PF13085 2Fe-2S iron-sulfur cluster binding domain JYA99_RS17660 PF00890 FAD binding domain JYA99_RS17660 PF02910 Fumarate reductase flavoprotein C-term JYA99_RS17665 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit JYA99_RS17670 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit JYA99_RS17675 PF00285 Citrate synthase, C-terminal domain JYA99_RS17680 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain JYA99_RS17680 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain JYA99_RS17680 PF06827 Zinc finger found in FPG and IleRS JYA99_RS17685 PF01470 Pyroglutamyl peptidase JYA99_RS17700 PF03746 LamB/YcsF family JYA99_RS17705 PF02626 Carboxyltransferase domain, subdomain A and B JYA99_RS17710 PF02682 Carboxyltransferase domain, subdomain C and D JYA99_RS17715 PF01784 NIF3 (NGG1p interacting factor 3) JYA99_RS17720 PF00854 POT family JYA99_RS17725 PF03441 FAD binding domain of DNA photolyase JYA99_RS17725 PF00875 DNA photolyase JYA99_RS17730 PF10725 Protein of unknown function (DUF2517) JYA99_RS17735 PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) JYA99_RS17740 PF03814 Potassium-transporting ATPase A subunit JYA99_RS17750 PF02669 K+-transporting ATPase, c chain JYA99_RS17755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYA99_RS17755 PF02702 Osmosensitive K+ channel His kinase sensor domain JYA99_RS17755 PF13493 Domain of unknown function (DUF4118) JYA99_RS17755 PF13492 GAF domain JYA99_RS17755 PF00512 His Kinase A (phospho-acceptor) domain JYA99_RS17760 PF00072 Response regulator receiver domain JYA99_RS17760 PF00486 Transcriptional regulatory protein, C terminal JYA99_RS17770 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JYA99_RS17770 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JYA99_RS17770 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JYA99_RS17770 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JYA99_RS17775 PF17206 SeqA protein N-terminal domain JYA99_RS17775 PF03925 SeqA protein C-terminal domain JYA99_RS17780 PF12697 Alpha/beta hydrolase family JYA99_RS17785 PF01402 Ribbon-helix-helix protein, copG family JYA99_RS17790 PF00258 Flavodoxin JYA99_RS17795 PF01475 Ferric uptake regulator family JYA99_RS17800 PF07690 Major Facilitator Superfamily JYA99_RS17805 PF13982 YbfN-like lipoprotein JYA99_RS17810 PF03573 outer membrane porin, OprD family JYA99_RS17820 PF00749 tRNA synthetases class I (E and Q), catalytic domain JYA99_RS17820 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain JYA99_RS17825 PF00367 phosphotransferase system, EIIB JYA99_RS17825 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JYA99_RS17825 PF02378 Phosphotransferase system, EIIC JYA99_RS17830 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase JYA99_RS17835 PF01979 Amidohydrolase family JYA99_RS17840 PF01047 MarR family JYA99_RS17840 PF00480 ROK family JYA99_RS17845 PF13344 Haloacid dehalogenase-like hydrolase JYA99_RS17850 PF13537 Glutamine amidotransferase domain JYA99_RS17850 PF00733 Asparagine synthase JYA99_RS17890 PF01494 FAD binding domain JYA99_RS17895 PF04055 Radical SAM superfamily JYA99_RS17895 PF01938 TRAM domain JYA99_RS17895 PF00919 Uncharacterized protein family UPF0004 JYA99_RS17900 PF02562 PhoH-like protein JYA99_RS17905 PF02130 Uncharacterized protein family UPF0054 JYA99_RS17910 PF03471 Transporter associated domain JYA99_RS17910 PF00571 CBS domain JYA99_RS17915 PF00795 Carbon-nitrogen hydrolase JYA99_RS17920 PF00497 Bacterial extracellular solute-binding proteins, family 3 JYA99_RS17925 PF00528 Binding-protein-dependent transport system inner membrane component JYA99_RS17930 PF00528 Binding-protein-dependent transport system inner membrane component JYA99_RS17935 PF00005 ABC transporter JYA99_RS17940 PF17287 POTRA domain JYA99_RS17940 PF08479 POTRA domain, ShlB-type JYA99_RS17940 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB JYA99_RS17945 PF05594 Haemagluttinin repeat JYA99_RS17945 PF13332 Hemagglutinin repeat JYA99_RS17945 PF05860 haemagglutination activity domain JYA99_RS17945 PF04829 Pre-toxin domain with VENN motif JYA99_RS17945 PF14436 Bacterial EndoU nuclease JYA99_RS17950 PF07295 Zinc-ribbon containing domain JYA99_RS17955 PF08264 Anticodon-binding domain of tRNA JYA99_RS17955 PF00133 tRNA synthetases class I (I, L, M and V) JYA99_RS17955 PF13603 Leucyl-tRNA synthetase, Domain 2 JYA99_RS17960 PF04390 Lipopolysaccharide-assembly JYA99_RS17965 PF06144 DNA polymerase III, delta subunit JYA99_RS17965 PF14840 Processivity clamp loader gamma complex DNA pol III C-term JYA99_RS17970 PF01467 Cytidylyltransferase-like JYA99_RS17975 PF00300 Histidine phosphatase superfamily (branch 1) JYA99_RS17985 PF02590 Predicted SPOUT methyltransferase JYA99_RS17990 PF00905 Penicillin binding protein transpeptidase domain JYA99_RS17990 PF03717 Penicillin-binding Protein dimerisation domain JYA99_RS17995 PF01098 Cell cycle protein JYA99_RS18000 PF03330 Lytic transglycolase JYA99_RS18000 PF05036 Sporulation related domain JYA99_RS18005 PF07943 Penicillin-binding protein 5, C-terminal domain JYA99_RS18005 PF00768 D-alanyl-D-alanine carboxypeptidase JYA99_RS18010 PF04359 Protein of unknown function (DUF493) JYA99_RS18015 PF03099 Biotin/lipoate A/B protein ligase family JYA99_RS18020 PF03466 LysR substrate binding domain JYA99_RS18020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYA99_RS18025 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family JYA99_RS18025 PF04055 Radical SAM superfamily JYA99_RS18030 PF02416 mttA/Hcf106 family JYA99_RS18035 PF00795 Carbon-nitrogen hydrolase JYA99_RS18040 PF02537 CrcB-like protein, Camphor Resistance (CrcB) JYA99_RS18045 PF00313 'Cold-shock' DNA-binding domain JYA99_RS18050 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP JYA99_RS18055 PF03606 C4-dicarboxylate anaerobic carrier JYA99_RS18060 PF00445 Ribonuclease T2 family JYA99_RS18065 PF14760 Rnk N-terminus JYA99_RS18065 PF01272 Transcription elongation factor, GreA/GreB, C-term JYA99_RS18070 PF00582 Universal stress protein family JYA99_RS18075 PF07992 Pyridine nucleotide-disulphide oxidoreductase JYA99_RS18075 PF13192 Thioredoxin domain JYA99_RS18080 PF10417 C-terminal domain of 1-Cys peroxiredoxin JYA99_RS18080 PF00578 AhpC/TSA family JYA99_RS18085 PF13098 Thioredoxin-like domain JYA99_RS18090 PF03466 LysR substrate binding domain JYA99_RS18090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYA99_RS18095 PF11922 Domain of unknown function (DUF3440) JYA99_RS18095 PF01507 Phosphoadenosine phosphosulfate reductase family JYA99_RS18100 PF02195 ParB-like nuclease domain JYA99_RS18105 PF00155 Aminotransferase class I and II JYA99_RS18115 PF03079 ARD/ARD' family JYA99_RS18120 PF01568 Molydopterin dinucleotide binding domain JYA99_RS18120 PF00384 Molybdopterin oxidoreductase JYA99_RS18130 PF00005 ABC transporter JYA99_RS18135 PF02653 Branched-chain amino acid transport system / permease component JYA99_RS18140 PF02653 Branched-chain amino acid transport system / permease component JYA99_RS18150 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JYA99_RS18150 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JYA99_RS18155 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JYA99_RS18155 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JYA99_RS18160 PF00596 Class II Aldolase and Adducin N-terminal domain JYA99_RS18165 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin JYA99_RS18175 PF07969 Amidohydrolase family JYA99_RS18180 PF00356 Bacterial regulatory proteins, lacI family JYA99_RS18185 PF00459 Inositol monophosphatase family JYA99_RS18190 PF07690 Major Facilitator Superfamily JYA99_RS18195 PF00328 Histidine phosphatase superfamily (branch 2) JYA99_RS18200 PF01008 Initiation factor 2 subunit family JYA99_RS18205 PF01636 Phosphotransferase enzyme family JYA99_RS18220 PF02653 Branched-chain amino acid transport system / permease component JYA99_RS18225 PF00005 ABC transporter JYA99_RS18230 PF00465 Iron-containing alcohol dehydrogenase JYA99_RS18250 PF04328 Selenoprotein, putative JYA99_RS18255 PF13722 5TM C-terminal transporter carbon starvation CstA JYA99_RS18255 PF02554 Carbon starvation protein CstA JYA99_RS18260 PF03061 Thioesterase superfamily JYA99_RS18270 PF00550 Phosphopantetheine attachment site JYA99_RS18270 PF00857 Isochorismatase family JYA99_RS18275 PF00501 AMP-binding enzyme JYA99_RS18275 PF13193 AMP-binding enzyme C-terminal domain JYA99_RS18280 PF00425 chorismate binding enzyme JYA99_RS18285 PF01497 Periplasmic binding protein JYA99_RS18290 PF05977 Transmembrane secretion effector JYA99_RS18295 PF01032 FecCD transport family JYA99_RS18300 PF01032 FecCD transport family JYA99_RS18305 PF00005 ABC transporter JYA99_RS18310 PF00668 Condensation domain JYA99_RS18310 PF13193 AMP-binding enzyme C-terminal domain JYA99_RS18310 PF00501 AMP-binding enzyme JYA99_RS18310 PF00550 Phosphopantetheine attachment site JYA99_RS18310 PF00975 Thioesterase domain JYA99_RS18315 PF03621 MbtH-like protein JYA99_RS18320 PF00756 Putative esterase JYA99_RS18320 PF11806 Domain of unknown function (DUF3327) JYA99_RS18325 PF00593 TonB dependent receptor JYA99_RS18325 PF07715 TonB-dependent Receptor Plug Domain JYA99_RS18330 PF01648 4'-phosphopantetheinyl transferase superfamily JYA99_RS18330 PF17837 4'-phosphopantetheinyl transferase N-terminal domain JYA99_RS18335 PF02779 Transketolase, pyrimidine binding domain JYA99_RS18335 PF02780 Transketolase, C-terminal domain JYA99_RS18340 PF00456 Transketolase, thiamine diphosphate binding domain JYA99_RS18345 PF00325 Bacterial regulatory proteins, crp family JYA99_RS18345 PF04198 Putative sugar-binding domain JYA99_RS18350 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JYA99_RS18350 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JYA99_RS18355 PF13407 Periplasmic binding protein domain JYA99_RS18365 PF00005 ABC transporter JYA99_RS18370 PF02653 Branched-chain amino acid transport system / permease component JYA99_RS18390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYA99_RS18390 PF03466 LysR substrate binding domain JYA99_RS18395 PF00924 Mechanosensitive ion channel JYA99_RS18405 PF02028 BCCT, betaine/carnitine/choline family transporter JYA99_RS18410 PF00440 Bacterial regulatory proteins, tetR family JYA99_RS18410 PF13977 BetI-type transcriptional repressor, C-terminal JYA99_RS18415 PF00171 Aldehyde dehydrogenase family JYA99_RS18420 PF00732 GMC oxidoreductase JYA99_RS18420 PF05199 GMC oxidoreductase JYA99_RS18430 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JYA99_RS18435 PF00528 Binding-protein-dependent transport system inner membrane component JYA99_RS18440 PF00528 Binding-protein-dependent transport system inner membrane component JYA99_RS18440 PF12911 N-terminal TM domain of oligopeptide transport permease C JYA99_RS18445 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JYA99_RS18445 PF00005 ABC transporter JYA99_RS18450 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JYA99_RS18450 PF00005 ABC transporter JYA99_RS18460 PF00202 Aminotransferase class-III JYA99_RS18465 PF00106 short chain dehydrogenase JYA99_RS18470 PF00005 ABC transporter JYA99_RS18475 PF00528 Binding-protein-dependent transport system inner membrane component JYA99_RS18480 PF00528 Binding-protein-dependent transport system inner membrane component JYA99_RS18485 PF00497 Bacterial extracellular solute-binding proteins, family 3 JYA99_RS18485 PF01464 Transglycosylase SLT domain JYA99_RS18490 PF00155 Aminotransferase class I and II JYA99_RS18490 PF00392 Bacterial regulatory proteins, gntR family JYA99_RS18495 PF00155 Aminotransferase class I and II JYA99_RS18500 PF00892 EamA-like transporter family JYA99_RS18505 PF07687 Peptidase dimerisation domain JYA99_RS18505 PF01546 Peptidase family M20/M25/M40 JYA99_RS18510 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JYA99_RS18510 PF00005 ABC transporter JYA99_RS18515 PF00005 ABC transporter JYA99_RS18515 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JYA99_RS18520 PF12911 N-terminal TM domain of oligopeptide transport permease C JYA99_RS18520 PF00528 Binding-protein-dependent transport system inner membrane component JYA99_RS18525 PF00528 Binding-protein-dependent transport system inner membrane component JYA99_RS18530 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JYA99_RS18535 PF04107 Glutamate-cysteine ligase family 2(GCS2) JYA99_RS18540 PF09992 Phosphodiester glycosidase JYA99_RS18545 PF00873 AcrB/AcrD/AcrF family JYA99_RS18550 PF13533 Biotin-lipoyl like JYA99_RS18555 PF00690 Cation transporter/ATPase, N-terminus JYA99_RS18555 PF00689 Cation transporting ATPase, C-terminus JYA99_RS18560 PF06643 Protein of unknown function (DUF1158) JYA99_RS18565 PF12833 Helix-turn-helix domain JYA99_RS18570 PF12706 Beta-lactamase superfamily domain JYA99_RS18575 PF00440 Bacterial regulatory proteins, tetR family JYA99_RS18580 PF04237 YjbR JYA99_RS18585 PF00881 Nitroreductase family JYA99_RS18595 PF03830 PTS system sorbose subfamily IIB component JYA99_RS18605 PF03613 PTS system mannose/fructose/sorbose family IID component JYA99_RS18610 PF01380 SIS domain JYA99_RS18615 PF01380 SIS domain JYA99_RS18620 PF03610 PTS system fructose IIA component JYA99_RS18620 PF00874 PRD domain JYA99_RS18620 PF00158 Sigma-54 interaction domain JYA99_RS18635 PF07690 Major Facilitator Superfamily JYA99_RS18640 PF00924 Mechanosensitive ion channel JYA99_RS18645 PF00356 Bacterial regulatory proteins, lacI family JYA99_RS18660 PF16449 Fimbrillin MatB JYA99_RS18665 PF18649 EcpB C-terminal domain JYA99_RS18670 PF15976 CS1-pili formation C-terminal JYA99_RS18670 PF16967 E-set like domain JYA99_RS18685 PF00196 Bacterial regulatory proteins, luxR family JYA99_RS18695 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JYA99_RS18695 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JYA99_RS18705 PF03825 Nucleoside H+ symporter JYA99_RS18710 PF00324 Amino acid permease JYA99_RS18715 PF00593 TonB dependent receptor JYA99_RS18715 PF07715 TonB-dependent Receptor Plug Domain JYA99_RS18725 PF00171 Aldehyde dehydrogenase family JYA99_RS18730 PF01266 FAD dependent oxidoreductase JYA99_RS18740 PF13520 Amino acid permease JYA99_RS18750 PF00850 Histone deacetylase domain JYA99_RS18760 PF00196 Bacterial regulatory proteins, luxR family JYA99_RS18765 PF04055 Radical SAM superfamily JYA99_RS18770 PF00884 Sulfatase JYA99_RS18780 PF17409 MoaF C-terminal domain JYA99_RS18780 PF10703 MoaF N-terminal domain JYA99_RS18785 PF00248 Aldo/keto reductase family JYA99_RS18790 PF00497 Bacterial extracellular solute-binding proteins, family 3 JYA99_RS18795 PF07687 Peptidase dimerisation domain JYA99_RS18795 PF01546 Peptidase family M20/M25/M40 JYA99_RS18825 PF01032 FecCD transport family JYA99_RS18830 PF00005 ABC transporter JYA99_RS18835 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JYA99_RS18835 PF00529 HlyD membrane-fusion protein of T1SS JYA99_RS18840 PF11742 Protein of unknown function (DUF3302) JYA99_RS18850 PF00294 pfkB family carbohydrate kinase JYA99_RS18855 PF02264 LamB porin JYA99_RS18855 PF11471 Maltoporin periplasmic N-terminal extension JYA99_RS18860 PF02378 Phosphotransferase system, EIIC JYA99_RS18860 PF00367 phosphotransferase system, EIIB JYA99_RS18865 PF08244 Glycosyl hydrolases family 32 C terminal JYA99_RS18865 PF00251 Glycosyl hydrolases family 32 N-terminal domain JYA99_RS18870 PF00356 Bacterial regulatory proteins, lacI family JYA99_RS18870 PF13407 Periplasmic binding protein domain JYA99_RS18880 PF02653 Branched-chain amino acid transport system / permease component JYA99_RS18885 PF00005 ABC transporter JYA99_RS18890 PF13407 Periplasmic binding protein domain JYA99_RS18895 PF00356 Bacterial regulatory proteins, lacI family JYA99_RS18900 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JYA99_RS18900 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JYA99_RS18905 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JYA99_RS18905 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JYA99_RS18910 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JYA99_RS18910 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JYA99_RS18915 PF01261 Xylose isomerase-like TIM barrel JYA99_RS18925 PF01336 OB-fold nucleic acid binding domain JYA99_RS18925 PF00152 tRNA synthetases class II (D, K and N) JYA99_RS18930 PF00854 POT family JYA99_RS18935 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain JYA99_RS18935 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain JYA99_RS18935 PF01276 Orn/Lys/Arg decarboxylase, major domain JYA99_RS18940 PF13520 Amino acid permease JYA99_RS18945 PF00486 Transcriptional regulatory protein, C terminal JYA99_RS18945 PF18500 CadC C-terminal domain 1 JYA99_RS18955 PF03279 Bacterial lipid A biosynthesis acyltransferase JYA99_RS18970 PF00577 Outer membrane usher protein JYA99_RS18970 PF13953 PapC C-terminal domain JYA99_RS18970 PF13954 PapC N-terminal domain JYA99_RS18975 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain JYA99_RS18975 PF02753 Pili assembly chaperone PapD, C-terminal domain JYA99_RS18980 PF16970 Type-1 fimbrial protein, A JYA99_RS18995 PF00285 Citrate synthase, C-terminal domain JYA99_RS19010 PF00576 HIUase/Transthyretin family JYA99_RS19030 PF13332 Hemagglutinin repeat JYA99_RS19030 PF04829 Pre-toxin domain with VENN motif JYA99_RS19030 PF05594 Haemagluttinin repeat JYA99_RS19040 PF04829 Pre-toxin domain with VENN motif JYA99_RS19040 PF05860 haemagglutination activity domain JYA99_RS19040 PF13332 Hemagglutinin repeat JYA99_RS19045 PF17287 POTRA domain JYA99_RS19045 PF08479 POTRA domain, ShlB-type JYA99_RS19045 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB JYA99_RS19055 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain JYA99_RS19055 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain JYA99_RS19065 PF01406 tRNA synthetases class I (C) catalytic domain JYA99_RS19065 PF09190 DALR domain JYA99_RS19070 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD JYA99_RS19075 PF00149 Calcineurin-like phosphoesterase JYA99_RS19085 PF00731 AIR carboxylase JYA99_RS19090 PF02222 ATP-grasp domain JYA99_RS19090 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain JYA99_RS19100 PF00267 Gram-negative porin JYA99_RS19115 PF00005 ABC transporter JYA99_RS19120 PF13472 GDSL-like Lipase/Acylhydrolase family JYA99_RS19125 PF00106 short chain dehydrogenase JYA99_RS19130 PF00085 Thioredoxin JYA99_RS19135 PF03649 Uncharacterised protein family (UPF0014) JYA99_RS19140 PF00005 ABC transporter JYA99_RS19145 PF16200 C-terminal region of band_7 JYA99_RS19145 PF01145 SPFH domain / Band 7 family JYA99_RS19150 PF01957 NfeD-like C-terminal, partner-binding JYA99_RS19155 PF13411 MerR HTH family regulatory protein JYA99_RS19160 PF00403 Heavy-metal-associated domain JYA99_RS19165 PF01963 TraB family JYA99_RS19170 PF04073 Aminoacyl-tRNA editing domain JYA99_RS19175 PF02872 5'-nucleotidase, C-terminal domain JYA99_RS19175 PF00149 Calcineurin-like phosphoesterase JYA99_RS19180 PF07690 Major Facilitator Superfamily JYA99_RS19185 PF00999 Sodium/hydrogen exchanger family JYA99_RS19185 PF02254 TrkA-N domain JYA99_RS19190 PF00294 pfkB family carbohydrate kinase JYA99_RS19195 PF00762 Ferrochelatase JYA99_RS19200 PF05191 Adenylate kinase, active site lid JYA99_RS19205 PF00183 Hsp90 protein JYA99_RS19205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYA99_RS19210 PF02132 RecR protein JYA99_RS19210 PF13662 Toprim domain JYA99_RS19215 PF02575 YbaB/EbfC DNA-binding family JYA99_RS19220 PF12170 DNA polymerase III tau subunit V interacting with alpha JYA99_RS19220 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding JYA99_RS19220 PF12169 DNA polymerase III subunits gamma and tau domain III JYA99_RS19225 PF00156 Phosphoribosyl transferase domain JYA99_RS19230 PF04304 Protein of unknown function (DUF454) JYA99_RS19235 PF07445 Primosomal replication protein priC JYA99_RS19240 PF10689 Protein of unknown function (DUF2496) JYA99_RS19245 PF04754 Putative transposase, YhgA-like JYA99_RS19250 PF12794 Mechanosensitive ion channel inner membrane domain 1 JYA99_RS19250 PF12795 Mechanosensitive ion channel porin domain JYA99_RS19250 PF00924 Mechanosensitive ion channel JYA99_RS19255 PF00440 Bacterial regulatory proteins, tetR family JYA99_RS19255 PF08361 MAATS-type transcriptional repressor, C-terminal region JYA99_RS19260 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JYA99_RS19260 PF00529 HlyD membrane-fusion protein of T1SS JYA99_RS19265 PF00873 AcrB/AcrD/AcrF family JYA99_RS19270 PF10757 Biofilm formation regulator YbaJ JYA99_RS19275 PF05321 Haemolysin expression modulating protein JYA99_RS19280 PF12464 Maltose acetyltransferase JYA99_RS19280 PF14602 Hexapeptide repeat of succinyl-transferase JYA99_RS19290 PF10777 Inner membrane protein YlaC JYA99_RS19295 PF00392 Bacterial regulatory proteins, gntR family JYA99_RS19295 PF00155 Aminotransferase class I and II JYA99_RS19305 PF00444 Ribosomal protein L36 JYA99_RS19310 PF01197 Ribosomal protein L31 JYA99_RS19315 PF00356 Bacterial regulatory proteins, lacI family JYA99_RS19320 PF02264 LamB porin JYA99_RS19325 PF00367 phosphotransferase system, EIIB JYA99_RS19325 PF02378 Phosphotransferase system, EIIC JYA99_RS19330 PF08533 Beta-galactosidase C-terminal domain JYA99_RS19330 PF08532 Beta-galactosidase trimerisation domain JYA99_RS19330 PF02449 Beta-galactosidase JYA99_RS19335 PF07745 Glycosyl hydrolase family 53 JYA99_RS19340 PF00528 Binding-protein-dependent transport system inner membrane component JYA99_RS19345 PF00528 Binding-protein-dependent transport system inner membrane component JYA99_RS19350 PF13416 Bacterial extracellular solute-binding protein JYA99_RS19355 PF17912 MalK OB fold domain JYA99_RS19355 PF00005 ABC transporter JYA99_RS19360 PF12792 CSS motif domain associated with EAL JYA99_RS19360 PF00563 EAL domain JYA99_RS19365 PF02583 Metal-sensitive transcriptional repressor JYA99_RS19370 PF03824 High-affinity nickel-transport protein JYA99_RS19405 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain JYA99_RS19410 PF09619 Type III secretion system lipoprotein chaperone (YscW) JYA99_RS19420 PF00909 Ammonium Transporter Family JYA99_RS19425 PF00543 Nitrogen regulatory protein P-II JYA99_RS19430 PF00664 ABC transporter transmembrane region JYA99_RS19430 PF00005 ABC transporter JYA99_RS19435 PF00664 ABC transporter transmembrane region JYA99_RS19435 PF00005 ABC transporter JYA99_RS19440 PF13404 AsnC-type helix-turn-helix domain JYA99_RS19440 PF01037 Lrp/AsnC ligand binding domain JYA99_RS19445 PF00291 Pyridoxal-phosphate dependent enzyme JYA99_RS19455 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JYA99_RS19455 PF12793 Sugar transport-related sRNA regulator N-term JYA99_RS19460 PF06508 Queuosine biosynthesis protein QueC JYA99_RS19475 PF13145 PPIC-type PPIASE domain JYA99_RS19480 PF00216 Bacterial DNA-binding protein JYA99_RS19485 PF02190 ATP-dependent protease La (LON) substrate-binding domain JYA99_RS19485 PF05362 Lon protease (S16) C-terminal proteolytic domain JYA99_RS19485 PF00004 ATPase family associated with various cellular activities (AAA) JYA99_RS19490 PF06689 ClpX C4-type zinc finger JYA99_RS19490 PF10431 C-terminal, D2-small domain, of ClpB protein JYA99_RS19490 PF07724 AAA domain (Cdc48 subfamily) JYA99_RS19495 PF00574 Clp protease JYA99_RS19500 PF05698 Bacterial trigger factor protein (TF) C-terminus JYA99_RS19500 PF05697 Bacterial trigger factor protein (TF) JYA99_RS19500 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JYA99_RS19505 PF01722 BolA-like protein JYA99_RS19510 PF08139 Prokaryotic membrane lipoprotein lipid attachment site JYA99_RS19510 PF03923 Uncharacterized lipoprotein JYA99_RS19515 PF07690 Major Facilitator Superfamily JYA99_RS19520 PF06481 COX Aromatic Rich Motif JYA99_RS19520 PF00116 Cytochrome C oxidase subunit II, periplasmic domain JYA99_RS19525 PF00115 Cytochrome C and Quinol oxidase polypeptide I JYA99_RS19530 PF00510 Cytochrome c oxidase subunit III JYA99_RS19535 PF03626 Prokaryotic Cytochrome C oxidase subunit IV JYA99_RS19540 PF01040 UbiA prenyltransferase family JYA99_RS19550 PF01614 Bacterial transcriptional regulator JYA99_RS19550 PF09339 IclR helix-turn-helix domain JYA99_RS19555 PF18317 Shikimate 5'-dehydrogenase C-terminal domain JYA99_RS19555 PF01488 Shikimate / quinate 5-dehydrogenase JYA99_RS19555 PF08501 Shikimate dehydrogenase substrate binding domain JYA99_RS19560 PF00890 FAD binding domain JYA99_RS19570 PF00890 FAD binding domain JYA99_RS19580 PF07690 Major Facilitator Superfamily JYA99_RS19585 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JYA99_RS19585 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JYA99_RS19590 PF07690 Major Facilitator Superfamily JYA99_RS19595 PF04461 Protein of unknown function (DUF520) JYA99_RS19600 PF02558 Ketopantoate reductase PanE/ApbA JYA99_RS19600 PF08546 Ketopantoate reductase PanE/ApbA C terminal JYA99_RS19605 PF01965 DJ-1/PfpI family JYA99_RS19615 PF02926 THUMP domain JYA99_RS19615 PF02568 Thiamine biosynthesis protein (ThiI) JYA99_RS19620 PF02609 Exonuclease VII small subunit JYA99_RS19625 PF00348 Polyprenyl synthetase JYA99_RS19630 PF02779 Transketolase, pyrimidine binding domain JYA99_RS19630 PF02780 Transketolase, C-terminal domain JYA99_RS19630 PF13292 1-deoxy-D-xylulose-5-phosphate synthase JYA99_RS19635 PF00248 Aldo/keto reductase family JYA99_RS19640 PF04608 Phosphatidylglycerophosphatase A JYA99_RS19645 PF02769 AIR synthase related protein, C-terminal domain JYA99_RS19645 PF00586 AIR synthase related protein, N-terminal domain JYA99_RS19650 PF01029 NusB family JYA99_RS19655 PF00885 6,7-dimethyl-8-ribityllumazine synthase JYA99_RS19660 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JYA99_RS19660 PF01872 RibD C-terminal domain JYA99_RS19665 PF03477 ATP cone domain JYA99_RS19670 PF11622 Protein of unknown function (DUF3251) JYA99_RS19675 PF03502 Nucleoside-specific channel-forming protein, Tsx JYA99_RS19690 PF02355 Protein export membrane protein JYA99_RS19690 PF07549 SecD/SecF GG Motif JYA99_RS19695 PF13721 SecD export protein N-terminal TM region JYA99_RS19695 PF07549 SecD/SecF GG Motif JYA99_RS19695 PF02355 Protein export membrane protein JYA99_RS19700 PF02699 Preprotein translocase subunit JYA99_RS19705 PF01702 Queuine tRNA-ribosyltransferase JYA99_RS19710 PF02547 Queuosine biosynthesis protein JYA99_RS19720 PF04336 Acyl carrier protein phosphodiesterase JYA99_RS19725 PF00578 AhpC/TSA family JYA99_RS19725 PF10417 C-terminal domain of 1-Cys peroxiredoxin JYA99_RS19735 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JYA99_RS19745 PF03611 PTS system sugar-specific permease component JYA99_RS19750 PF00294 pfkB family carbohydrate kinase JYA99_RS19755 PF01116 Fructose-bisphosphate aldolase class-II JYA99_RS19760 PF01979 Amidohydrolase family JYA99_RS19770 PF00857 Isochorismatase family JYA99_RS19775 PF03466 LysR substrate binding domain JYA99_RS19775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYA99_RS19780 PF00128 Alpha amylase, catalytic domain JYA99_RS19780 PF02903 Alpha amylase, N-terminal ig-like domain JYA99_RS19785 PF00324 Amino acid permease JYA99_RS19790 PF05525 Branched-chain amino acid transport protein JYA99_RS19795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYA99_RS19795 PF00512 His Kinase A (phospho-acceptor) domain JYA99_RS19795 PF00989 PAS fold JYA99_RS19795 PF11808 Phosphate regulon sensor protein PhoR JYA99_RS19800 PF00072 Response regulator receiver domain JYA99_RS19800 PF00486 Transcriptional regulatory protein, C terminal JYA99_RS19805 PF12320 Type 5 capsule protein repressor C-terminal domain JYA99_RS19805 PF00149 Calcineurin-like phosphoesterase JYA99_RS19810 PF13476 AAA domain JYA99_RS19815 PF00480 ROK family JYA99_RS19820 PF04381 Putative exonuclease, RdgC JYA99_RS19825 PF06865 Pyrimidine/purine nucleoside phosphorylase JYA99_RS19830 PF07302 AroM protein JYA99_RS19835 PF16362 YaiA protein JYA99_RS19840 PF01202 Shikimate kinase JYA99_RS19845 PF09849 Uncharacterized protein conserved in bacteria (DUF2076) JYA99_RS19850 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 JYA99_RS19855 PF14748 Pyrroline-5-carboxylate reductase dimerisation JYA99_RS19855 PF03807 NADP oxidoreductase coenzyme F420-dependent JYA99_RS19860 PF07769 psiF repeat JYA99_RS19865 PF00245 Alkaline phosphatase JYA99_RS19870 PF10796 Sigma-S stabilisation anti-adaptor protein JYA99_RS19875 PF07690 Major Facilitator Superfamily JYA99_RS19885 PF01820 D-ala D-ala ligase N-terminus JYA99_RS19885 PF07478 D-ala D-ala ligase C-terminus JYA99_RS19890 PF10953 Protein of unknown function (DUF2754) JYA99_RS19895 PF10954 Protein of unknown function (DUF2755) JYA99_RS19900 PF07759 Protein of unknown function (DUF1615) JYA99_RS19905 PF05992 SbmA/BacA-like family JYA99_RS19910 PF00857 Isochorismatase family JYA99_RS19915 PF00144 Beta-lactamase JYA99_RS19920 PF00490 Delta-aminolevulinic acid dehydratase JYA99_RS19935 PF02668 Taurine catabolism dioxygenase TauD, TfdA family JYA99_RS19940 PF00528 Binding-protein-dependent transport system inner membrane component JYA99_RS19945 PF00005 ABC transporter JYA99_RS19950 PF04069 Substrate binding domain of ABC-type glycine betaine transport system JYA99_RS19955 PF02574 Homocysteine S-methyltransferase JYA99_RS19960 PF00324 Amino acid permease JYA99_RS19970 PF00324 Amino acid permease JYA99_RS19975 PF06751 Ethanolamine ammonia lyase large subunit (EutB) JYA99_RS19980 PF05985 Ethanolamine ammonia-lyase light chain (EutC) JYA99_RS19990 PF13458 Periplasmic binding protein JYA99_RS19995 PF02653 Branched-chain amino acid transport system / permease component JYA99_RS20000 PF02653 Branched-chain amino acid transport system / permease component JYA99_RS20000 PF11862 Domain of unknown function (DUF3382) JYA99_RS20005 PF12399 Branched-chain amino acid ATP-binding cassette transporter JYA99_RS20005 PF00005 ABC transporter JYA99_RS20010 PF00005 ABC transporter JYA99_RS20020 PF00497 Bacterial extracellular solute-binding proteins, family 3 JYA99_RS20025 PF00005 ABC transporter JYA99_RS20030 PF00528 Binding-protein-dependent transport system inner membrane component JYA99_RS20035 PF00528 Binding-protein-dependent transport system inner membrane component JYA99_RS20050 PF15976 CS1-pili formation C-terminal JYA99_RS20050 PF16967 E-set like domain JYA99_RS20055 PF18649 EcpB C-terminal domain JYA99_RS20060 PF16449 Fimbrillin MatB JYA99_RS20065 PF00196 Bacterial regulatory proteins, luxR family JYA99_RS20070 PF00005 ABC transporter JYA99_RS20080 PF00528 Binding-protein-dependent transport system inner membrane component JYA99_RS20085 PF00528 Binding-protein-dependent transport system inner membrane component JYA99_RS20105 PF00877 NlpC/P60 family JYA99_RS20110 PF00267 Gram-negative porin JYA99_RS20115 PF01472 PUA domain JYA99_RS20115 PF00696 Amino acid kinase family JYA99_RS20120 PF00171 Aldehyde dehydrogenase family JYA99_RS20150 PF00990 Diguanylate cyclase, GGDEF domain JYA99_RS20150 PF00563 EAL domain JYA99_RS20150 PF03707 Bacterial signalling protein N terminal repeat JYA99_RS20160 PF00589 Phage integrase family JYA99_RS20160 PF18644 Phage integrase SAM-like domain JYA99_RS20190 PF00005 ABC transporter JYA99_RS20195 PF00528 Binding-protein-dependent transport system inner membrane component JYA99_RS20200 PF00528 Binding-protein-dependent transport system inner membrane component JYA99_RS20205 PF00106 short chain dehydrogenase JYA99_RS20215 PF03466 LysR substrate binding domain JYA99_RS20215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYA99_RS20220 PF00155 Aminotransferase class I and II JYA99_RS20225 PF03746 LamB/YcsF family JYA99_RS20230 PF02626 Carboxyltransferase domain, subdomain A and B JYA99_RS20245 PF00892 EamA-like transporter family JYA99_RS20250 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain JYA99_RS20250 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase JYA99_RS20255 PF02785 Biotin carboxylase C-terminal domain JYA99_RS20255 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JYA99_RS20255 PF00289 Biotin carboxylase, N-terminal domain JYA99_RS20260 PF00364 Biotin-requiring enzyme JYA99_RS20265 PF00069 Protein kinase domain JYA99_RS20265 PF13191 AAA ATPase domain JYA99_RS20270 PF00676 Dehydrogenase E1 component JYA99_RS20275 PF02780 Transketolase, C-terminal domain JYA99_RS20275 PF02779 Transketolase, pyrimidine binding domain JYA99_RS20280 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JYA99_RS20280 PF00364 Biotin-requiring enzyme JYA99_RS20280 PF02817 e3 binding domain JYA99_RS20285 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JYA99_RS20285 PF07992 Pyridine nucleotide-disulphide oxidoreductase JYA99_RS20295 PF13847 Methyltransferase domain JYA99_RS20300 PF09857 Putative toxin of bacterial toxin-antitoxin pair JYA99_RS20305 PF08943 CsiD JYA99_RS20310 PF01266 FAD dependent oxidoreductase JYA99_RS20315 PF00171 Aldehyde dehydrogenase family JYA99_RS20320 PF00202 Aminotransferase class-III JYA99_RS20325 PF00324 Amino acid permease JYA99_RS20330 PF00392 Bacterial regulatory proteins, gntR family JYA99_RS20330 PF07729 FCD domain JYA99_RS20335 PF07417 Sigma factor-binding transcriptional regulator Crl JYA99_RS20340 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) JYA99_RS20345 PF00156 Phosphoribosyl transferase domain JYA99_RS20350 PF01546 Peptidase family M20/M25/M40 JYA99_RS20350 PF07687 Peptidase dimerisation domain JYA99_RS20355 PF13673 Acetyltransferase (GNAT) domain JYA99_RS20360 PF11798 IMS family HHH motif JYA99_RS20360 PF00817 impB/mucB/samB family JYA99_RS20360 PF11799 impB/mucB/samB family C-terminal domain JYA99_RS20365 PF03009 Glycerophosphoryl diester phosphodiesterase family JYA99_RS20370 PF04400 (Na+)-NQR maturation NqrM JYA99_RS20375 PF00111 2Fe-2S iron-sulfur cluster binding domain JYA99_RS20375 PF00175 Oxidoreductase NAD-binding domain JYA99_RS20375 PF00970 Oxidoreductase FAD-binding domain JYA99_RS20380 PF02508 Rnf-Nqr subunit, membrane protein JYA99_RS20385 PF02508 Rnf-Nqr subunit, membrane protein JYA99_RS20390 PF04205 FMN-binding domain JYA99_RS20395 PF03116 NQR2, RnfD, RnfE family JYA99_RS20400 PF11973 NQRA C-terminal domain JYA99_RS20400 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) JYA99_RS20405 PF03734 L,D-transpeptidase catalytic domain JYA99_RS20410 PF13230 Glutamine amidotransferases class-II JYA99_RS20415 PF13580 SIS domain JYA99_RS20420 PF09317 Domain of unknown function (DUF1974) JYA99_RS20420 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JYA99_RS20420 PF02770 Acyl-CoA dehydrogenase, middle domain JYA99_RS20420 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JYA99_RS20425 PF00795 Carbon-nitrogen hydrolase JYA99_RS20430 PF01810 LysE type translocator JYA99_RS20435 PF03466 LysR substrate binding domain JYA99_RS20435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYA99_RS20445 PF00929 Exonuclease JYA99_RS20450 PF00075 RNase H JYA99_RS20455 PF08241 Methyltransferase domain JYA99_RS20460 PF16123 Hydroxyacylglutathione hydrolase C-terminus JYA99_RS20460 PF00753 Metallo-beta-lactamase superfamily JYA99_RS20465 PF01476 LysM domain JYA99_RS20465 PF01464 Transglycosylase SLT domain JYA99_RS20470 PF08241 Methyltransferase domain JYA99_RS20475 PF03372 Endonuclease/Exonuclease/phosphatase family JYA99_RS20480 PF07690 Major Facilitator Superfamily JYA99_RS20485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYA99_RS20485 PF03466 LysR substrate binding domain JYA99_RS20490 PF00248 Aldo/keto reductase family JYA99_RS20530 PF09383 NIL domain JYA99_RS20530 PF00005 ABC transporter JYA99_RS20535 PF00528 Binding-protein-dependent transport system inner membrane component JYA99_RS20540 PF03180 NLPA lipoprotein JYA99_RS20545 PF16358 RcsF lipoprotein JYA99_RS20550 PF01980 tRNA-methyltransferase O JYA99_RS20550 PF18389 TrmO C-terminal domain JYA99_RS20555 PF03129 Anticodon binding domain JYA99_RS20555 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JYA99_RS20555 PF04073 Aminoacyl-tRNA editing domain JYA99_RS20560 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family JYA99_RS20565 PF17185 NlpE C-terminal OB domain JYA99_RS20565 PF04170 NlpE N-terminal domain JYA99_RS20570 PF00472 RF-1 domain JYA99_RS20575 PF07152 YaeQ protein JYA99_RS20580 PF06786 Uncharacterised protein family (UPF0253) JYA99_RS20585 PF07073 Modulator of Rho-dependent transcription termination (ROF) JYA99_RS20590 PF09179 TilS substrate binding domain JYA99_RS20590 PF11734 TilS substrate C-terminal domain JYA99_RS20590 PF01171 PP-loop family JYA99_RS20595 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JYA99_RS20600 PF01276 Orn/Lys/Arg decarboxylase, major domain JYA99_RS20600 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain JYA99_RS20600 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain JYA99_RS20605 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit JYA99_RS20610 PF01336 OB-fold nucleic acid binding domain JYA99_RS20610 PF02811 PHP domain JYA99_RS20610 PF14579 Helix-hairpin-helix motif JYA99_RS20610 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JYA99_RS20610 PF07733 Bacterial DNA polymerase III alpha NTPase domain JYA99_RS20615 PF01351 Ribonuclease HII JYA99_RS20620 PF02684 Lipid-A-disaccharide synthetase JYA99_RS20625 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 JYA99_RS20625 PF00132 Bacterial transferase hexapeptide (six repeats) JYA99_RS20630 PF07977 FabA-like domain JYA99_RS20635 PF00132 Bacterial transferase hexapeptide (six repeats) JYA99_RS20635 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD JYA99_RS20640 PF03938 Outer membrane protein (OmpH-like) JYA99_RS20645 PF07244 Surface antigen variable number repeat JYA99_RS20645 PF01103 Surface antigen JYA99_RS20650 PF17820 PDZ domain JYA99_RS20650 PF02163 Peptidase family M50 JYA99_RS20660 PF01255 Putative undecaprenyl diphosphate synthase JYA99_RS20665 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain JYA99_RS20665 PF13288 DXP reductoisomerase C-terminal domain JYA99_RS20665 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase JYA99_RS20670 PF01765 Ribosome recycling factor JYA99_RS20675 PF00696 Amino acid kinase family JYA99_RS20680 PF00889 Elongation factor TS JYA99_RS20685 PF00318 Ribosomal protein S2 JYA99_RS20690 PF00557 Metallopeptidase family M24 JYA99_RS20695 PF01966 HD domain JYA99_RS20695 PF08335 GlnD PII-uridylyltransferase JYA99_RS20695 PF01909 Nucleotidyltransferase domain JYA99_RS20695 PF01842 ACT domain JYA99_RS20700 PF14602 Hexapeptide repeat of succinyl-transferase JYA99_RS20700 PF00132 Bacterial transferase hexapeptide (six repeats) JYA99_RS20700 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal JYA99_RS20705 PF11944 Protein of unknown function (DUF3461) JYA99_RS20710 PF13556 PucR C-terminal helix-turn-helix domain JYA99_RS20710 PF17853 GGDEF-like domain JYA99_RS20710 PF05651 Putative sugar diacid recognition JYA99_RS20715 PF00595 PDZ domain JYA99_RS20720 PF13286 Phosphohydrolase-associated domain JYA99_RS20720 PF01966 HD domain JYA99_RS20725 PF01048 Phosphorylase superfamily JYA99_RS20730 PF01497 Periplasmic binding protein JYA99_RS20735 PF03458 UPF0126 domain JYA99_RS20740 PF01521 Iron-sulphur cluster biosynthesis JYA99_RS20745 PF00654 Voltage gated chloride channel JYA99_RS20750 PF00202 Aminotransferase class-III JYA99_RS20755 PF01032 FecCD transport family JYA99_RS20760 PF01497 Periplasmic binding protein JYA99_RS20765 PF00005 ABC transporter JYA99_RS20770 PF00593 TonB dependent receptor JYA99_RS20770 PF07715 TonB-dependent Receptor Plug Domain JYA99_RS20775 PF14814 Bifunctional transglycosylase second domain JYA99_RS20775 PF00905 Penicillin binding protein transpeptidase domain JYA99_RS20775 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal JYA99_RS20775 PF00912 Transglycosylase JYA99_RS20780 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) JYA99_RS20785 PF16537 Type II secretion system protein B JYA99_RS20790 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JYA99_RS20790 PF03714 Bacterial pullanase-associated domain JYA99_RS20790 PF18494 Pullulanase Ins domain JYA99_RS20790 PF17967 Pullulanase N2 domain JYA99_RS20790 PF11852 Domain of unknown function (DUF3372) JYA99_RS20800 PF11356 Type II secretion system protein C JYA99_RS20805 PF03958 Bacterial type II/III secretion system short domain JYA99_RS20805 PF00263 Bacterial type II and III secretion system protein JYA99_RS20810 PF00437 Type II/IV secretion system protein JYA99_RS20815 PF00482 Type II secretion system (T2SS), protein F JYA99_RS20820 PF08334 Type II secretion system (T2SS), protein G JYA99_RS20820 PF07963 Prokaryotic N-terminal methylation motif JYA99_RS20825 PF07963 Prokaryotic N-terminal methylation motif JYA99_RS20830 PF02501 Type II secretion system (T2SS), protein I JYA99_RS20830 PF07963 Prokaryotic N-terminal methylation motif JYA99_RS20835 PF07963 Prokaryotic N-terminal methylation motif JYA99_RS20835 PF11612 Type II secretion system (T2SS), protein J JYA99_RS20840 PF03934 Type II secretion system (T2SS), protein K JYA99_RS20845 PF12693 GspL periplasmic domain JYA99_RS20845 PF05134 Type II secretion system (T2SS), protein L JYA99_RS20850 PF04612 Type II secretion system (T2SS), protein M JYA99_RS20855 PF01203 Type II secretion system (T2SS), protein N JYA99_RS20860 PF06750 Bacterial Peptidase A24 N-terminal domain JYA99_RS20860 PF01478 Type IV leader peptidase family JYA99_RS20865 PF00270 DEAD/DEAH box helicase JYA99_RS20865 PF08482 ATP-dependent helicase C-terminal JYA99_RS20865 PF04408 Helicase associated domain (HA2) JYA99_RS20865 PF00271 Helicase conserved C-terminal domain JYA99_RS20870 PF02834 LigT like Phosphoesterase JYA99_RS20875 PF17746 SfsA N-terminal OB domain JYA99_RS20875 PF03749 Sugar fermentation stimulation protein RE domain JYA99_RS20880 PF01258 Prokaryotic dksA/traR C4-type zinc finger JYA99_RS20885 PF00749 tRNA synthetases class I (E and Q), catalytic domain JYA99_RS20890 PF12626 Polymerase A arginine-rich C-terminus JYA99_RS20890 PF12627 Probable RNA and SrmB- binding site of polymerase A JYA99_RS20890 PF01743 Poly A polymerase head domain JYA99_RS20895 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) JYA99_RS20900 PF02548 Ketopantoate hydroxymethyltransferase JYA99_RS20905 PF02569 Pantoate-beta-alanine ligase JYA99_RS20910 PF02261 Aspartate decarboxylase JYA99_RS20915 PF01522 Polysaccharide deacetylase JYA99_RS20920 PF03610 PTS system fructose IIA component JYA99_RS20925 PF01061 ABC-2 type transporter JYA99_RS20930 PF00005 ABC transporter JYA99_RS20935 PF00484 Carbonic anhydrase JYA99_RS20940 PF00156 Phosphoribosyl transferase domain JYA99_RS20950 PF01011 PQQ enzyme repeat JYA99_RS20955 PF07732 Multicopper oxidase JYA99_RS20955 PF00394 Multicopper oxidase JYA99_RS20955 PF07731 Multicopper oxidase JYA99_RS20960 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) JYA99_RS20980 PF17284 Spermidine synthase tetramerisation domain JYA99_RS20985 PF02675 S-adenosylmethionine decarboxylase JYA99_RS20990 PF06062 Uncharacterised protein family (UPF0231) JYA99_RS20995 PF11791 Aconitate B N-terminal domain JYA99_RS20995 PF00330 Aconitase family (aconitate hydratase) JYA99_RS20995 PF06434 Aconitate hydratase 2 N-terminus JYA99_RS21015 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JYA99_RS21015 PF07992 Pyridine nucleotide-disulphide oxidoreductase JYA99_RS21020 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JYA99_RS21020 PF00364 Biotin-requiring enzyme JYA99_RS21020 PF02817 e3 binding domain JYA99_RS21025 PF00456 Transketolase, thiamine diphosphate binding domain JYA99_RS21025 PF17831 Pyruvate dehydrogenase E1 component middle domain JYA99_RS21030 PF00392 Bacterial regulatory proteins, gntR family JYA99_RS21030 PF07729 FCD domain JYA99_RS21035 PF00324 Amino acid permease JYA99_RS21045 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain JYA99_RS21045 PF04616 Glycosyl hydrolases family 43 JYA99_RS21050 PF17113 Regulatory signalling modulator protein AmpE JYA99_RS21055 PF01510 N-acetylmuramoyl-L-alanine amidase JYA99_RS21060 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain JYA99_RS21060 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain JYA99_RS21065 PF07963 Prokaryotic N-terminal methylation motif JYA99_RS21070 PF00437 Type II/IV secretion system protein JYA99_RS21070 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain JYA99_RS21075 PF00482 Type II secretion system (T2SS), protein F JYA99_RS21080 PF00478 IMP dehydrogenase / GMP reductase domain JYA99_RS21085 PF01121 Dephospho-CoA kinase JYA99_RS21090 PF07072 Cell division protein JYA99_RS21095 PF03884 DNA gyrase inhibitor YacG JYA99_RS21100 PF00293 NUDIX domain JYA99_RS21105 PF02810 SEC-C motif JYA99_RS21105 PF07517 SecA DEAD-like domain JYA99_RS21105 PF01043 SecA preprotein cross-linking domain JYA99_RS21105 PF07516 SecA Wing and Scaffold domain JYA99_RS21110 PF06558 Secretion monitor precursor protein (SecM) JYA99_RS21115 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase JYA99_RS21120 PF12327 FtsZ family, C-terminal domain JYA99_RS21120 PF00091 Tubulin/FtsZ family, GTPase domain JYA99_RS21125 PF02491 SHS2 domain inserted in FTSA JYA99_RS21130 PF03799 Cell division protein FtsQ JYA99_RS21130 PF08478 POTRA domain, FtsQ-type JYA99_RS21135 PF01820 D-ala D-ala ligase N-terminus JYA99_RS21135 PF07478 D-ala D-ala ligase C-terminus JYA99_RS21140 PF01225 Mur ligase family, catalytic domain JYA99_RS21140 PF08245 Mur ligase middle domain JYA99_RS21140 PF02875 Mur ligase family, glutamate ligase domain JYA99_RS21145 PF03033 Glycosyltransferase family 28 N-terminal domain JYA99_RS21145 PF04101 Glycosyltransferase family 28 C-terminal domain JYA99_RS21150 PF01098 Cell cycle protein JYA99_RS21155 PF08245 Mur ligase middle domain JYA99_RS21155 PF02875 Mur ligase family, glutamate ligase domain JYA99_RS21160 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 JYA99_RS21160 PF00953 Glycosyl transferase family 4 JYA99_RS21165 PF08245 Mur ligase middle domain JYA99_RS21165 PF02875 Mur ligase family, glutamate ligase domain JYA99_RS21165 PF01225 Mur ligase family, catalytic domain JYA99_RS21170 PF01225 Mur ligase family, catalytic domain JYA99_RS21170 PF02875 Mur ligase family, glutamate ligase domain JYA99_RS21170 PF08245 Mur ligase middle domain JYA99_RS21175 PF03717 Penicillin-binding Protein dimerisation domain JYA99_RS21175 PF00905 Penicillin binding protein transpeptidase domain JYA99_RS21180 PF04999 Cell division protein FtsL JYA99_RS21185 PF01795 MraW methylase family JYA99_RS21190 PF02381 MraZ protein, putative antitoxin-like JYA99_RS21195 PF00356 Bacterial regulatory proteins, lacI family JYA99_RS21195 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JYA99_RS21200 PF10369 Small subunit of acetolactate synthase JYA99_RS21205 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JYA99_RS21205 PF00205 Thiamine pyrophosphate enzyme, central domain JYA99_RS21205 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JYA99_RS21210 PF03466 LysR substrate binding domain JYA99_RS21210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYA99_RS21220 PF00682 HMGL-like JYA99_RS21220 PF08502 LeuA allosteric (dimerisation) domain JYA99_RS21225 PF00180 Isocitrate/isopropylmalate dehydrogenase JYA99_RS21230 PF00330 Aconitase family (aconitate hydratase) JYA99_RS21235 PF00694 Aconitase C-terminal domain JYA99_RS21240 PF07992 Pyridine nucleotide-disulphide oxidoreductase JYA99_RS21240 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JYA99_RS21245 PF08501 Shikimate dehydrogenase substrate binding domain JYA99_RS21245 PF18317 Shikimate 5'-dehydrogenase C-terminal domain JYA99_RS21250 PF07690 Major Facilitator Superfamily JYA99_RS21255 PF01487 Type I 3-dehydroquinase JYA99_RS21260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYA99_RS21260 PF03466 LysR substrate binding domain JYA99_RS21265 PF07690 Major Facilitator Superfamily JYA99_RS21270 PF07690 Major Facilitator Superfamily JYA99_RS21280 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JYA99_RS21280 PF12793 Sugar transport-related sRNA regulator N-term JYA99_RS21290 PF00528 Binding-protein-dependent transport system inner membrane component JYA99_RS21295 PF00005 ABC transporter JYA99_RS21300 PF09335 SNARE associated Golgi protein JYA99_RS21305 PF12833 Helix-turn-helix domain JYA99_RS21305 PF02311 AraC-like ligand binding domain JYA99_RS21310 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JYA99_RS21315 PF11762 L-arabinose isomerase C-terminal domain JYA99_RS21315 PF02610 L-arabinose isomerase JYA99_RS21320 PF00596 Class II Aldolase and Adducin N-terminal domain JYA99_RS21325 PF03104 DNA polymerase family B, exonuclease domain JYA99_RS21325 PF00136 DNA polymerase family B JYA99_RS21330 PF00176 SNF2 family N-terminal domain JYA99_RS21330 PF18337 RapA N-terminal Tudor like domain JYA99_RS21330 PF12137 RNA polymerase recycling family C-terminal JYA99_RS21330 PF00271 Helicase conserved C-terminal domain JYA99_RS21330 PF18339 RapA N-terminal Tudor like domain 1 JYA99_RS21335 PF00849 RNA pseudouridylate synthase JYA99_RS21340 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase JYA99_RS21345 PF03390 2-hydroxycarboxylate transporter family JYA99_RS21350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYA99_RS21350 PF17203 Single cache domain 3 JYA99_RS21355 PF12431 Transcriptional regulator JYA99_RS21355 PF00072 Response regulator receiver domain JYA99_RS21360 PF00226 DnaJ domain JYA99_RS21360 PF05099 Tellurite resistance protein TerB JYA99_RS21365 PF04453 LPS transport system D JYA99_RS21365 PF03968 OstA-like protein JYA99_RS21370 PF09312 SurA N-terminal domain JYA99_RS21370 PF00639 PPIC-type PPIASE domain JYA99_RS21375 PF04166 Pyridoxal phosphate biosynthetic protein PdxA JYA99_RS21380 PF00398 Ribosomal RNA adenine dimethylase JYA99_RS21385 PF04379 ApaG domain JYA99_RS21390 PF00149 Calcineurin-like phosphoesterase JYA99_RS21395 PF00186 Dihydrofolate reductase JYA99_RS21400 PF02254 TrkA-N domain JYA99_RS21400 PF00999 Sodium/hydrogen exchanger family JYA99_RS21405 PF02525 Flavodoxin-like fold JYA99_RS21410 PF06004 Bacterial protein of unknown function (DUF903) JYA99_RS21415 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain JYA99_RS21415 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JYA99_RS21415 PF02142 MGS-like domain JYA99_RS21420 PF00117 Glutamine amidotransferase class-I JYA99_RS21420 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain JYA99_RS21425 PF05173 Dihydrodipicolinate reductase, C-terminus JYA99_RS21425 PF01113 Dihydrodipicolinate reductase, N-terminus JYA99_RS21430 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase JYA99_RS21435 PF04223 Citrate lyase, alpha subunit (CitF) JYA99_RS21440 PF03328 HpcH/HpaI aldolase/citrate lyase family JYA99_RS21445 PF06857 Malonate decarboxylase delta subunit (MdcD) JYA99_RS21450 PF08218 Citrate lyase ligase C-terminal domain JYA99_RS21450 PF00583 Acetyltransferase (GNAT) family JYA99_RS21455 PF03390 2-hydroxycarboxylate transporter family JYA99_RS21460 PF04277 Oxaloacetate decarboxylase, gamma chain JYA99_RS21465 PF00364 Biotin-requiring enzyme JYA99_RS21465 PF02436 Conserved carboxylase domain JYA99_RS21465 PF00682 HMGL-like JYA99_RS21470 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit JYA99_RS21475 PF17203 Single cache domain 3 JYA99_RS21475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYA99_RS21480 PF00072 Response regulator receiver domain JYA99_RS21480 PF12431 Transcriptional regulator JYA99_RS21485 PF02272 DHHA1 domain JYA99_RS21485 PF01411 tRNA synthetases class II (A) JYA99_RS21485 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JYA99_RS21490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYA99_RS21490 PF03466 LysR substrate binding domain JYA99_RS21500 PF01156 Inosine-uridine preferring nucleoside hydrolase JYA99_RS21505 PF02401 LytB protein JYA99_RS21510 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JYA99_RS21515 PF01252 Signal peptidase (SPase) II JYA99_RS21520 PF00133 tRNA synthetases class I (I, L, M and V) JYA99_RS21520 PF08264 Anticodon-binding domain of tRNA JYA99_RS21520 PF06827 Zinc finger found in FPG and IleRS JYA99_RS21525 PF01687 Riboflavin kinase JYA99_RS21525 PF06574 FAD synthetase JYA99_RS21530 PF01649 Ribosomal protein S20 JYA99_RS21535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYA99_RS21535 PF03466 LysR substrate binding domain JYA99_RS21540 PF06965 Na+/H+ antiporter 1 JYA99_RS21545 PF00684 DnaJ central domain JYA99_RS21545 PF01556 DnaJ C terminal domain JYA99_RS21545 PF00226 DnaJ domain JYA99_RS21550 PF00012 Hsp70 protein JYA99_RS21555 PF10807 Protein of unknown function (DUF2541) JYA99_RS21560 PF13099 Domain of unknown function (DUF3944) JYA99_RS21560 PF03981 Ubiquinol-cytochrome C chaperone JYA99_RS21565 PF01184 GPR1/FUN34/yaaH family JYA99_RS21570 PF07690 Major Facilitator Superfamily JYA99_RS21575 PF00994 Probable molybdopterin binding domain JYA99_RS21580 PF00923 Transaldolase/Fructose-6-phosphate aldolase JYA99_RS21585 PF01235 Sodium:alanine symporter family JYA99_RS21590 PF03883 Peroxide stress protein YaaA JYA99_RS21600 PF00291 Pyridoxal-phosphate dependent enzyme JYA99_RS21600 PF14821 Threonine synthase N terminus JYA99_RS21605 PF00288 GHMP kinases N terminal domain JYA99_RS21605 PF08544 GHMP kinases C terminal JYA99_RS21610 PF01842 ACT domain JYA99_RS21610 PF13840 ACT domain JYA99_RS21610 PF00742 Homoserine dehydrogenase JYA99_RS21610 PF03447 Homoserine dehydrogenase, NAD binding domain JYA99_RS21610 PF00696 Amino acid kinase family JYA99_RS21615 PF08254 Threonine leader peptide JYA99_RS21620 PF00588 SpoU rRNA Methylase family JYA99_RS21630 PF00072 Response regulator receiver domain JYA99_RS21630 PF00486 Transcriptional regulatory protein, C terminal JYA99_RS21635 PF06123 Inner membrane protein CreD JYA99_RS21640 PF00672 HAMP domain JYA99_RS21640 PF00512 His Kinase A (phospho-acceptor) domain JYA99_RS21640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYA99_RS21645 PF00072 Response regulator receiver domain JYA99_RS21645 PF00486 Transcriptional regulatory protein, C terminal JYA99_RS21650 PF05981 CreA protein JYA99_RS21655 PF12833 Helix-turn-helix domain JYA99_RS21655 PF06445 GyrI-like small molecule binding domain JYA99_RS21660 PF00300 Histidine phosphatase superfamily (branch 1) JYA99_RS21665 PF01931 Protein of unknown function DUF84 JYA99_RS21670 PF01371 Trp repressor protein JYA99_RS21675 PF01464 Transglycosylase SLT domain JYA99_RS21675 PF14718 Soluble lytic murein transglycosylase L domain JYA99_RS21680 PF00005 ABC transporter JYA99_RS21680 PF12848 ABC transporter JYA99_RS21685 PF13521 AAA domain JYA99_RS21685 PF01381 Helix-turn-helix JYA99_RS21690 PF18073 Rubredoxin metal binding domain JYA99_RS21695 PF18429 Domain of unknown function (DUF5609) JYA99_RS21700 PF10144 Bacterial virulence factor haemolysin JYA99_RS21705 PF10437 Bacterial lipoate protein ligase C-terminus JYA99_RS21705 PF03099 Biotin/lipoate A/B protein ligase family JYA99_RS21710 PF01048 Phosphorylase superfamily JYA99_RS21715 PF01676 Metalloenzyme superfamily JYA99_RS21720 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain JYA99_RS21720 PF02885 Glycosyl transferase family, helical bundle domain JYA99_RS21720 PF00591 Glycosyl transferase family, a/b domain JYA99_RS21725 PF01791 DeoC/LacD family aldolase JYA99_RS21730 PF07662 Na+ dependent nucleoside transporter C-terminus JYA99_RS21730 PF07670 Nucleoside recognition JYA99_RS21730 PF01773 Na+ dependent nucleoside transporter N-terminus JYA99_RS21735 PF01026 TatD related DNase JYA99_RS21740 PF01734 Patatin-like phospholipase JYA99_RS21745 PF07043 Protein of unknown function (DUF1328) JYA99_RS21750 PF04972 BON domain JYA99_RS21755 PF00009 Elongation factor Tu GTP binding domain JYA99_RS21755 PF03144 Elongation factor Tu domain 2 JYA99_RS21755 PF16658 Class II release factor RF3, C-terminal domain JYA99_RS21760 PF13419 Haloacid dehalogenase-like hydrolase JYA99_RS21765 PF00583 Acetyltransferase (GNAT) family JYA99_RS21770 PF03603 DNA polymerase III psi subunit JYA99_RS21775 PF08468 Methyltransferase small domain N-terminal JYA99_RS21775 PF05175 Methyltransferase small domain JYA99_RS21795 PF07256 Protein of unknown function (DUF1435) JYA99_RS21805 PF00990 Diguanylate cyclase, GGDEF domain JYA99_RS21810 PF11575 FhuF 2Fe-2S C-terminal domain JYA99_RS21810 PF06276 Ferric iron reductase FhuF-like transporter JYA99_RS21815 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JYA99_RS21815 PF02378 Phosphotransferase system, EIIC JYA99_RS21820 PF04073 Aminoacyl-tRNA editing domain JYA99_RS21825 PF00196 Bacterial regulatory proteins, luxR family JYA99_RS21830 PF00196 Bacterial regulatory proteins, luxR family JYA99_RS21840 PF01494 FAD binding domain JYA99_RS21845 PF06738 Putative threonine/serine exporter JYA99_RS21850 PF12821 Threonine/Serine exporter, ThrE JYA99_RS21855 PF17948 DnaT DNA-binding domain JYA99_RS21860 PF01695 IstB-like ATP binding protein JYA99_RS21865 PF10696 Protein of unknown function (DUF2501) JYA99_RS21870 PF00884 Sulfatase JYA99_RS21875 PF04754 Putative transposase, YhgA-like JYA99_RS21880 PF01380 SIS domain JYA99_RS21885 PF01380 SIS domain JYA99_RS21890 PF03613 PTS system mannose/fructose/sorbose family IID component JYA99_RS21895 PF03609 PTS system sorbose-specific iic component JYA99_RS21900 PF03830 PTS system sorbose subfamily IIB component JYA99_RS21905 PF03830 PTS system sorbose subfamily IIB component JYA99_RS21905 PF03610 PTS system fructose IIA component JYA99_RS21910 PF00874 PRD domain JYA99_RS21910 PF03610 PTS system fructose IIA component JYA99_RS21910 PF00158 Sigma-54 interaction domain JYA99_RS21915 PF00583 Acetyltransferase (GNAT) family JYA99_RS21915 PF00814 Glycoprotease family JYA99_RS21920 PF00583 Acetyltransferase (GNAT) family JYA99_RS21925 PF01380 SIS domain JYA99_RS21925 PF01418 Helix-turn-helix domain, rpiR family JYA99_RS21930 PF01081 KDPG and KHG aldolase JYA99_RS21935 PF05035 2-keto-3-deoxy-galactonokinase JYA99_RS21950 PF07969 Amidohydrolase family JYA99_RS21965 PF02615 Malate/L-lactate dehydrogenase JYA99_RS21975 PF01047 MarR family JYA99_RS21985 PF01557 Fumarylacetoacetate (FAA) hydrolase family JYA99_RS21990 PF01557 Fumarylacetoacetate (FAA) hydrolase family JYA99_RS21995 PF00171 Aldehyde dehydrogenase family JYA99_RS22000 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase JYA99_RS22005 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase JYA99_RS22010 PF01557 Fumarylacetoacetate (FAA) hydrolase family JYA99_RS22015 PF03328 HpcH/HpaI aldolase/citrate lyase family JYA99_RS22020 PF07690 Major Facilitator Superfamily JYA99_RS22025 PF12833 Helix-turn-helix domain JYA99_RS22030 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal JYA99_RS22030 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal JYA99_RS22035 PF01613 Flavin reductase like domain JYA99_RS22050 PF02554 Carbon starvation protein CstA JYA99_RS22050 PF13722 5TM C-terminal transporter carbon starvation CstA JYA99_RS22055 PF04328 Selenoprotein, putative JYA99_RS22060 PF02492 CobW/HypB/UreG, nucleotide-binding domain JYA99_RS22060 PF07683 Cobalamin synthesis protein cobW C-terminal domain JYA99_RS22070 PF00171 Aldehyde dehydrogenase family JYA99_RS22075 PF04754 Putative transposase, YhgA-like JYA99_RS22080 PF02311 AraC-like ligand binding domain JYA99_RS22080 PF12833 Helix-turn-helix domain JYA99_RS22090 PF04286 Protein of unknown function (DUF445) JYA99_RS22095 PF07690 Major Facilitator Superfamily JYA99_RS22105 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component JYA99_RS22110 PF01869 BadF/BadG/BcrA/BcrD ATPase family JYA99_RS22115 PF11823 Protein of unknown function (DUF3343) JYA99_RS22125 PF00529 HlyD membrane-fusion protein of T1SS JYA99_RS22125 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JYA99_RS22135 PF06568 Domain of unknown function (DUF1127) JYA99_RS22140 PF00155 Aminotransferase class I and II JYA99_RS22140 PF00392 Bacterial regulatory proteins, gntR family JYA99_RS22145 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JYA99_RS22150 PF03466 LysR substrate binding domain JYA99_RS22150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYA99_RS22155 PF02525 Flavodoxin-like fold JYA99_RS22160 PF02653 Branched-chain amino acid transport system / permease component JYA99_RS22165 PF02653 Branched-chain amino acid transport system / permease component JYA99_RS22170 PF00005 ABC transporter JYA99_RS22175 PF13407 Periplasmic binding protein domain JYA99_RS22180 PF00579 tRNA synthetases class I (W and Y) JYA99_RS22185 PF13533 Biotin-lipoyl like JYA99_RS22190 PF00005 ABC transporter JYA99_RS22225 PF08007 Cupin superfamily protein JYA99_RS22240 PF00672 HAMP domain JYA99_RS22240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYA99_RS22240 PF00512 His Kinase A (phospho-acceptor) domain JYA99_RS22245 PF00072 Response regulator receiver domain JYA99_RS22245 PF00486 Transcriptional regulatory protein, C terminal JYA99_RS22250 PF02321 Outer membrane efflux protein JYA99_RS22255 PF11604 Copper binding periplasmic protein CusF JYA99_RS22260 PF00529 HlyD membrane-fusion protein of T1SS JYA99_RS22260 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JYA99_RS22265 PF00873 AcrB/AcrD/AcrF family JYA99_RS22275 PF08212 Lipocalin-like domain JYA99_RS22280 PF13411 MerR HTH family regulatory protein JYA99_RS22290 PF00106 short chain dehydrogenase JYA99_RS22325 PF08349 Protein of unknown function (DUF1722) JYA99_RS22330 PF02264 LamB porin JYA99_RS22345 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain JYA99_RS22345 PF04616 Glycosyl hydrolases family 43 JYA99_RS22385 PF13091 PLD-like domain JYA99_RS22385 PF13087 AAA domain JYA99_RS22390 PF02384 N-6 DNA Methylase JYA99_RS22405 PF12102 Domain of unknown function (DUF3578) JYA99_RS22405 PF07728 AAA domain (dynein-related subfamily) JYA99_RS22440 PF00484 Carbonic anhydrase JYA99_RS22445 PF01740 STAS domain JYA99_RS22445 PF00916 Sulfate permease family JYA99_RS22450 PF08240 Alcohol dehydrogenase GroES-like domain JYA99_RS22450 PF00107 Zinc-binding dehydrogenase JYA99_RS22455 PF00528 Binding-protein-dependent transport system inner membrane component JYA99_RS22460 PF00528 Binding-protein-dependent transport system inner membrane component JYA99_RS22465 PF00149 Calcineurin-like phosphoesterase JYA99_RS22470 PF17912 MalK OB fold domain JYA99_RS22470 PF00005 ABC transporter JYA99_RS22475 PF13416 Bacterial extracellular solute-binding protein JYA99_RS22480 PF01261 Xylose isomerase-like TIM barrel JYA99_RS22485 PF01261 Xylose isomerase-like TIM barrel JYA99_RS22490 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JYA99_RS22490 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JYA99_RS22495 PF00205 Thiamine pyrophosphate enzyme, central domain JYA99_RS22495 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JYA99_RS22495 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JYA99_RS22500 PF00294 pfkB family carbohydrate kinase JYA99_RS22505 PF02685 Glucokinase JYA99_RS22505 PF01418 Helix-turn-helix domain, rpiR family JYA99_RS22505 PF01380 SIS domain JYA99_RS22510 PF04962 KduI/IolB family JYA99_RS22515 PF00171 Aldehyde dehydrogenase family JYA99_RS22525 PF05872 Bacterial protein of unknown function (DUF853) JYA99_RS22530 PF03739 Lipopolysaccharide export system permease LptF/LptG JYA99_RS22535 PF03739 Lipopolysaccharide export system permease LptF/LptG JYA99_RS22540 PF00883 Cytosol aminopeptidase family, catalytic domain JYA99_RS22540 PF02789 Cytosol aminopeptidase family, N-terminal domain JYA99_RS22545 PF04364 DNA polymerase III chi subunit, HolC JYA99_RS22550 PF08264 Anticodon-binding domain of tRNA JYA99_RS22550 PF00133 tRNA synthetases class I (I, L, M and V) JYA99_RS22550 PF10458 Valyl tRNA synthetase tRNA binding arm JYA99_RS22555 PF00583 Acetyltransferase (GNAT) family JYA99_RS22560 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) JYA99_RS22565 PF06877 Regulator of ribonuclease activity B JYA99_RS22570 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JYA99_RS22570 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JYA99_RS22575 PF04074 YhcH/YjgK/YiaL JYA99_RS22585 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JYA99_RS22585 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JYA99_RS22590 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain JYA99_RS22590 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain JYA99_RS22595 PF01042 Endoribonuclease L-PSP JYA99_RS22600 PF00689 Cation transporting ATPase, C-terminus JYA99_RS22600 PF00690 Cation transporter/ATPase, N-terminus JYA99_RS22605 PF00356 Bacterial regulatory proteins, lacI family JYA99_RS22610 PF00367 phosphotransferase system, EIIB JYA99_RS22610 PF02378 Phosphotransferase system, EIIC JYA99_RS22615 PF00128 Alpha amylase, catalytic domain JYA99_RS22615 PF11941 Domain of unknown function (DUF3459) JYA99_RS22620 PF02378 Phosphotransferase system, EIIC JYA99_RS22625 PF11975 Family 4 glycosyl hydrolase C-terminal domain JYA99_RS22625 PF02056 Family 4 glycosyl hydrolase JYA99_RS22630 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JYA99_RS22645 PF03477 ATP cone domain JYA99_RS22645 PF13597 Anaerobic ribonucleoside-triphosphate reductase JYA99_RS22655 PF05016 ParE toxin of type II toxin-antitoxin system, parDE JYA99_RS22660 PF04221 RelB antitoxin JYA99_RS22665 PF05043 Mga helix-turn-helix domain JYA99_RS22665 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JYA99_RS22665 PF00874 PRD domain JYA99_RS22665 PF08279 HTH domain JYA99_RS22670 PF10282 Lactonase, 7-bladed beta-propeller JYA99_RS22675 PF07071 KDGP aldolase JYA99_RS22680 PF03841 L-seryl-tRNA selenium transferase JYA99_RS22685 PF01979 Amidohydrolase family JYA99_RS22715 PF07361 Cytochrome b562 JYA99_RS22720 PF01523 Putative modulator of DNA gyrase JYA99_RS22725 PF04751 Protein of unknown function (DUF615) JYA99_RS22745 PF01225 Mur ligase family, catalytic domain JYA99_RS22745 PF02875 Mur ligase family, glutamate ligase domain JYA99_RS22745 PF08245 Mur ligase middle domain JYA99_RS22750 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain JYA99_RS22755 PF02653 Branched-chain amino acid transport system / permease component JYA99_RS22760 PF02653 Branched-chain amino acid transport system / permease component JYA99_RS22765 PF00005 ABC transporter JYA99_RS22770 PF13407 Periplasmic binding protein domain JYA99_RS22775 PF00719 Inorganic pyrophosphatase JYA99_RS22785 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like JYA99_RS22790 PF04357 TamB, inner membrane protein subunit of TAM complex JYA99_RS22795 PF01103 Surface antigen JYA99_RS22795 PF07244 Surface antigen variable number repeat JYA99_RS22795 PF17243 POTRA domain TamA domain 1 JYA99_RS22800 PF01625 Peptide methionine sulfoxide reductase JYA99_RS22805 PF03471 Transporter associated domain JYA99_RS22805 PF00571 CBS domain JYA99_RS22805 PF01595 Cyclin M transmembrane N-terminal domain JYA99_RS22815 PF06526 Protein of unknown function (DUF1107) JYA99_RS22820 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) JYA99_RS22825 PF00459 Inositol monophosphatase family JYA99_RS22830 PF00149 Calcineurin-like phosphoesterase JYA99_RS22830 PF02872 5'-nucleotidase, C-terminal domain JYA99_RS22835 PF01638 HxlR-like helix-turn-helix JYA99_RS22840 PF05368 NmrA-like family JYA99_RS22845 PF12833 Helix-turn-helix domain JYA99_RS22850 PF00892 EamA-like transporter family JYA99_RS22855 PF04405 Domain of Unknown function (DUF542) JYA99_RS22855 PF01814 Hemerythrin HHE cation binding domain JYA99_RS22860 PF00324 Amino acid permease JYA99_RS22865 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase JYA99_RS22865 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JYA99_RS22870 PF04225 Opacity-associated protein A LysM-like domain JYA99_RS22870 PF08525 Opacity-associated protein A N-terminal motif JYA99_RS22875 PF01281 Ribosomal protein L9, N-terminal domain JYA99_RS22875 PF03948 Ribosomal protein L9, C-terminal domain JYA99_RS22880 PF01084 Ribosomal protein S18 JYA99_RS22885 PF00436 Single-strand binding protein family JYA99_RS22890 PF01250 Ribosomal protein S6 JYA99_RS22895 PF07338 Protein of unknown function (DUF1471) JYA99_RS22900 PF07690 Major Facilitator Superfamily JYA99_RS22905 PF00596 Class II Aldolase and Adducin N-terminal domain JYA99_RS22910 PF01261 Xylose isomerase-like TIM barrel JYA99_RS22915 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family JYA99_RS22920 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JYA99_RS22925 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JYA99_RS22930 PF03611 PTS system sugar-specific permease component JYA99_RS22940 PF08220 DeoR-like helix-turn-helix domain JYA99_RS22940 PF00455 DeoR C terminal sensor domain JYA99_RS22945 PF00326 Prolyl oligopeptidase family JYA99_RS22950 PF07338 Protein of unknown function (DUF1471) JYA99_RS22955 PF07338 Protein of unknown function (DUF1471) JYA99_RS22960 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JYA99_RS22960 PF02770 Acyl-CoA dehydrogenase, middle domain JYA99_RS22960 PF18158 Adaptive response protein AidB N-terminal domain JYA99_RS22965 PF00588 SpoU rRNA Methylase family JYA99_RS22965 PF08032 RNA 2'-O ribose methyltransferase substrate binding JYA99_RS22970 PF08206 Ribonuclease B OB domain JYA99_RS22970 PF17876 Cold shock domain JYA99_RS22970 PF00575 S1 RNA binding domain JYA99_RS22970 PF00773 RNB domain JYA99_RS22970 PF08461 Ribonuclease R winged-helix domain JYA99_RS22975 PF02082 Transcriptional regulator JYA99_RS22980 PF00709 Adenylosuccinate synthetase JYA99_RS22985 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) JYA99_RS22995 PF01145 SPFH domain / Band 7 family JYA99_RS23000 PF01145 SPFH domain / Band 7 family JYA99_RS23000 PF12221 Bacterial membrane protein N terminal JYA99_RS23005 PF13167 GTP-binding GTPase N-terminal JYA99_RS23005 PF16360 GTP-binding GTPase Middle Region JYA99_RS23005 PF01926 50S ribosome-binding GTPase JYA99_RS23010 PF17209 Hfq protein JYA99_RS23020 PF01119 DNA mismatch repair protein, C-terminal domain JYA99_RS23020 PF08676 MutL C terminal dimerisation domain JYA99_RS23025 PF01520 N-acetylmuramoyl-L-alanine amidase JYA99_RS23030 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE JYA99_RS23035 PF03853 YjeF-related protein N-terminus JYA99_RS23035 PF01256 Carbohydrate kinase JYA99_RS23040 PF08331 Domain of unknown function (DUF1730) JYA99_RS23060 PF00497 Bacterial extracellular solute-binding proteins, family 3 JYA99_RS23065 PF00929 Exonuclease JYA99_RS23070 PF03193 RsgA GTPase JYA99_RS23075 PF02666 Phosphatidylserine decarboxylase JYA99_RS23080 PF00924 Mechanosensitive ion channel JYA99_RS23080 PF12794 Mechanosensitive ion channel inner membrane domain 1 JYA99_RS23080 PF12795 Mechanosensitive ion channel porin domain JYA99_RS23085 PF13520 Amino acid permease JYA99_RS23090 PF00152 tRNA synthetases class II (D, K and N) JYA99_RS23095 PF00890 FAD binding domain JYA99_RS23095 PF02910 Fumarate reductase flavoprotein C-term JYA99_RS23100 PF13085 2Fe-2S iron-sulfur cluster binding domain JYA99_RS23100 PF13183 4Fe-4S dicluster domain JYA99_RS23105 PF02300 Fumarate reductase subunit C JYA99_RS23110 PF02313 Fumarate reductase subunit D JYA99_RS23115 PF08212 Lipocalin-like domain JYA99_RS23120 PF00893 Small Multidrug Resistance protein JYA99_RS23125 PF08085 Entericidin EcnA/B family JYA99_RS23135 PF08207 Elongation factor P (EF-P) KOW-like domain JYA99_RS23135 PF09285 Elongation factor P, C-terminal JYA99_RS23135 PF01132 Elongation factor P (EF-P) OB domain JYA99_RS23140 PF04055 Radical SAM superfamily JYA99_RS23155 PF02753 Pili assembly chaperone PapD, C-terminal domain JYA99_RS23155 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain JYA99_RS23160 PF00577 Outer membrane usher protein JYA99_RS23160 PF13953 PapC C-terminal domain JYA99_RS23160 PF13954 PapC N-terminal domain JYA99_RS23175 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JYA99_RS23175 PF00529 HlyD membrane-fusion protein of T1SS JYA99_RS23180 PF03412 Peptidase C39 family JYA99_RS23180 PF00005 ABC transporter JYA99_RS23180 PF00664 ABC transporter transmembrane region JYA99_RS23190 PF13698 Domain of unknown function (DUF4156) JYA99_RS23195 PF00118 TCP-1/cpn60 chaperonin family JYA99_RS23200 PF00166 Chaperonin 10 Kd subunit JYA99_RS23205 PF13520 Amino acid permease JYA99_RS23210 PF04186 FxsA cytoplasmic membrane protein JYA99_RS23215 PF10415 Fumarase C C-terminus JYA99_RS23215 PF00206 Lyase JYA99_RS23220 PF03605 Anaerobic c4-dicarboxylate membrane transporter JYA99_RS23225 PF03091 CutA1 divalent ion tolerance protein JYA99_RS23230 PF02683 Cytochrome C biogenesis protein transmembrane region JYA99_RS23230 PF11412 Disulphide bond corrector protein DsbC JYA99_RS23285 PF14883 Hypothetical glycosyl hydrolase family 13 JYA99_RS23285 PF01522 Polysaccharide deacetylase JYA99_RS23290 PF00535 Glycosyl transferase family 2 JYA99_RS23305 PF03741 Integral membrane protein TerC family JYA99_RS23315 PF00226 DnaJ domain JYA99_RS23315 PF01556 DnaJ C terminal domain JYA99_RS23330 PF06406 StbA protein JYA99_RS23345 PF02056 Family 4 glycosyl hydrolase JYA99_RS23345 PF11975 Family 4 glycosyl hydrolase C-terminal domain JYA99_RS23350 PF12833 Helix-turn-helix domain JYA99_RS23355 PF08946 Osmosensory transporter coiled coil JYA99_RS23355 PF00083 Sugar (and other) transporter JYA99_RS23360 PF03831 PhnA domain JYA99_RS23360 PF08274 PhnA Zinc-Ribbon JYA99_RS23365 PF06983 3-demethylubiquinone-9 3-methyltransferase JYA99_RS23370 PF07702 UTRA domain JYA99_RS23370 PF00392 Bacterial regulatory proteins, gntR family JYA99_RS23375 PF06754 Phosphonate metabolism protein PhnG JYA99_RS23380 PF05845 Bacterial phosphonate metabolism protein (PhnH) JYA99_RS23385 PF05861 Bacterial phosphonate metabolism protein (PhnI) JYA99_RS23390 PF06007 Phosphonate metabolism protein PhnJ JYA99_RS23395 PF00005 ABC transporter JYA99_RS23400 PF00005 ABC transporter JYA99_RS23405 PF07969 Amidohydrolase family JYA99_RS23415 PF12706 Beta-lactamase superfamily domain JYA99_RS23425 PF13426 PAS domain JYA99_RS23425 PF00072 Response regulator receiver domain JYA99_RS23425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYA99_RS23430 PF00005 ABC transporter JYA99_RS23435 PF02653 Branched-chain amino acid transport system / permease component JYA99_RS23440 PF13407 Periplasmic binding protein domain JYA99_RS23460 PF00486 Transcriptional regulatory protein, C terminal JYA99_RS23460 PF00072 Response regulator receiver domain JYA99_RS23470 PF08238 Sel1 repeat JYA99_RS23475 PF00375 Sodium:dicarboxylate symporter family JYA99_RS23485 PF00501 AMP-binding enzyme JYA99_RS23485 PF13193 AMP-binding enzyme C-terminal domain JYA99_RS23485 PF16177 Acetyl-coenzyme A synthetase N-terminus JYA99_RS23490 PF04341 Protein of unknown function, DUF485 JYA99_RS23495 PF00474 Sodium:solute symporter family JYA99_RS23510 PF13954 PapC N-terminal domain JYA99_RS23510 PF00577 Outer membrane usher protein JYA99_RS23510 PF13953 PapC C-terminal domain JYA99_RS23515 PF02753 Pili assembly chaperone PapD, C-terminal domain JYA99_RS23515 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain JYA99_RS23520 PF00419 Fimbrial protein JYA99_RS23525 PF04172 LrgB-like family JYA99_RS23530 PF03788 LrgA family JYA99_RS23535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYA99_RS23535 PF03466 LysR substrate binding domain JYA99_RS23540 PF00999 Sodium/hydrogen exchanger family JYA99_RS23545 PF00860 Permease family JYA99_RS23550 PF00043 Glutathione S-transferase, C-terminal domain JYA99_RS23550 PF02798 Glutathione S-transferase, N-terminal domain JYA99_RS23555 PF09278 MerR, DNA binding JYA99_RS23555 PF00376 MerR family regulatory protein JYA99_RS23560 PF12833 Helix-turn-helix domain JYA99_RS23565 PF00563 EAL domain JYA99_RS23565 PF12792 CSS motif domain associated with EAL JYA99_RS23570 PF15940 Family of unknown function JYA99_RS23575 PF00528 Binding-protein-dependent transport system inner membrane component JYA99_RS23590 PF00005 ABC transporter JYA99_RS23590 PF08402 TOBE domain JYA99_RS23595 PF12706 Beta-lactamase superfamily domain JYA99_RS23595 PF00753 Metallo-beta-lactamase superfamily JYA99_RS23600 PF00356 Bacterial regulatory proteins, lacI family JYA99_RS23605 PF00459 Inositol monophosphatase family JYA99_RS23615 PF07244 Surface antigen variable number repeat JYA99_RS23615 PF01103 Surface antigen JYA99_RS23625 PF07519 Tannase and feruloyl esterase JYA99_RS23630 PF12833 Helix-turn-helix domain JYA99_RS23635 PF07715 TonB-dependent Receptor Plug Domain JYA99_RS23635 PF00593 TonB dependent receptor JYA99_RS23640 PF01464 Transglycosylase SLT domain JYA99_RS23645 PF00436 Single-strand binding protein family JYA99_RS23650 PF17755 UvrA DNA-binding domain JYA99_RS23650 PF17760 UvrA interaction domain JYA99_RS23650 PF00005 ABC transporter JYA99_RS23655 PF04237 YjbR JYA99_RS23660 PF01894 Uncharacterised protein family UPF0047 JYA99_RS23665 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) JYA99_RS23670 PF00155 Aminotransferase class I and II JYA99_RS23675 PF00842 Alanine racemase, C-terminal domain JYA99_RS23675 PF01168 Alanine racemase, N-terminal domain JYA99_RS23680 PF03796 DnaB-like helicase C terminal domain JYA99_RS23680 PF00772 DnaB-like helicase N terminal domain JYA99_RS23685 PF00107 Zinc-binding dehydrogenase JYA99_RS23685 PF08240 Alcohol dehydrogenase GroES-like domain JYA99_RS23690 PF09583 Phage shock protein G (Phageshock_PspG) JYA99_RS23695 PF01207 Dihydrouridine synthase (Dus) JYA99_RS23705 PF01475 Ferric uptake regulator family JYA99_RS23710 PF05532 CsbD-like JYA99_RS23720 PF01554 MatE JYA99_RS23725 PF01726 LexA DNA binding domain JYA99_RS23725 PF00717 Peptidase S24-like JYA99_RS23730 PF01219 Prokaryotic diacylglycerol kinase JYA99_RS23735 PF01553 Acyltransferase JYA99_RS23740 PF01040 UbiA prenyltransferase family JYA99_RS23745 PF04345 Chorismate lyase JYA99_RS23750 PF07148 Maltose operon periplasmic protein precursor (MalM) JYA99_RS23755 PF02264 LamB porin JYA99_RS23760 PF17912 MalK OB fold domain JYA99_RS23760 PF00005 ABC transporter JYA99_RS23765 PF01547 Bacterial extracellular solute-binding protein JYA99_RS23770 PF14785 Maltose transport system permease protein MalF P2 domain JYA99_RS23770 PF00528 Binding-protein-dependent transport system inner membrane component JYA99_RS23775 PF00528 Binding-protein-dependent transport system inner membrane component JYA99_RS23780 PF06146 Phosphate-starvation-inducible E JYA99_RS23785 PF03313 Serine dehydratase alpha chain JYA99_RS23800 PF01042 Endoribonuclease L-PSP JYA99_RS23810 PF12804 MobA-like NTP transferase domain JYA99_RS23810 PF14602 Hexapeptide repeat of succinyl-transferase JYA99_RS23810 PF00132 Bacterial transferase hexapeptide (six repeats) JYA99_RS23815 PF00342 Phosphoglucose isomerase JYA99_RS23820 PF01842 ACT domain JYA99_RS23820 PF00696 Amino acid kinase family JYA99_RS23825 PF01758 Sodium Bile acid symporter family JYA99_RS23830 PF11656 YjbD family (DUF3811) JYA99_RS23835 PF00849 RNA pseudouridylate synthase JYA99_RS23835 PF01479 S4 domain JYA99_RS23840 PF04198 Putative sugar-binding domain JYA99_RS23840 PF13936 Helix-turn-helix domain JYA99_RS23845 PF00106 short chain dehydrogenase JYA99_RS23850 PF03610 PTS system fructose IIA component JYA99_RS23855 PF03830 PTS system sorbose subfamily IIB component JYA99_RS23860 PF03609 PTS system sorbose-specific iic component JYA99_RS23865 PF03613 PTS system mannose/fructose/sorbose family IID component JYA99_RS23870 PF08240 Alcohol dehydrogenase GroES-like domain JYA99_RS23870 PF00107 Zinc-binding dehydrogenase JYA99_RS23875 PF08501 Shikimate dehydrogenase substrate binding domain JYA99_RS23880 PF02690 Na+/Pi-cotransporter JYA99_RS23885 PF02310 B12 binding domain JYA99_RS23885 PF02574 Homocysteine S-methyltransferase JYA99_RS23885 PF00809 Pterin binding enzyme JYA99_RS23885 PF02965 Vitamin B12 dependent methionine synthase, activation domain JYA99_RS23885 PF02607 B12 binding domain JYA99_RS23890 PF01614 Bacterial transcriptional regulator JYA99_RS23890 PF09339 IclR helix-turn-helix domain JYA99_RS23895 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) JYA99_RS23900 PF00463 Isocitrate lyase family JYA99_RS23905 PF01274 Malate synthase JYA99_RS23910 PF04204 Homoserine O-succinyltransferase JYA99_RS23915 PF13673 Acetyltransferase (GNAT) domain JYA99_RS23940 PF01808 AICARFT/IMPCHase bienzyme JYA99_RS23940 PF02142 MGS-like domain JYA99_RS23945 PF02844 Phosphoribosylglycinamide synthetase, N domain JYA99_RS23945 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain JYA99_RS23945 PF02843 Phosphoribosylglycinamide synthetase, C domain JYA99_RS23950 PF00158 Sigma-54 interaction domain JYA99_RS23950 PF02954 Bacterial regulatory protein, Fis family JYA99_RS23950 PF00072 Response regulator receiver domain JYA99_RS23955 PF00512 His Kinase A (phospho-acceptor) domain JYA99_RS23955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYA99_RS23960 PF13801 Heavy-metal resistance JYA99_RS23965 PF07356 Protein of unknown function (DUF1481) JYA99_RS23970 PF00216 Bacterial DNA-binding protein JYA99_RS23975 PF04222 Protein of unknown function (DUF416) JYA99_RS23980 PF04493 Endonuclease V JYA99_RS23985 PF01208 Uroporphyrinogen decarboxylase (URO-D) JYA99_RS23990 PF00293 NUDIX domain JYA99_RS23990 PF09297 NADH pyrophosphatase zinc ribbon domain JYA99_RS23995 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ JYA99_RS24000 PF01964 Radical SAM ThiC family JYA99_RS24000 PF13667 ThiC-associated domain JYA99_RS24005 PF02581 Thiamine monophosphate synthase JYA99_RS24010 PF00899 ThiF family JYA99_RS24015 PF02597 ThiS family JYA99_RS24020 PF05690 Thiazole biosynthesis protein ThiG JYA99_RS24025 PF06968 Biotin and Thiamin Synthesis associated domain JYA99_RS24025 PF04055 Radical SAM superfamily JYA99_RS24030 PF00990 Diguanylate cyclase, GGDEF domain JYA99_RS24035 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JYA99_RS24040 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit JYA99_RS24045 PF03605 Anaerobic c4-dicarboxylate membrane transporter JYA99_RS24050 PF04997 RNA polymerase Rpb1, domain 1 JYA99_RS24050 PF04998 RNA polymerase Rpb1, domain 5 JYA99_RS24050 PF04983 RNA polymerase Rpb1, domain 3 JYA99_RS24050 PF05000 RNA polymerase Rpb1, domain 4 JYA99_RS24050 PF00623 RNA polymerase Rpb1, domain 2 JYA99_RS24055 PF10385 RNA polymerase beta subunit external 1 domain JYA99_RS24055 PF04565 RNA polymerase Rpb2, domain 3 JYA99_RS24055 PF04561 RNA polymerase Rpb2, domain 2 JYA99_RS24055 PF04563 RNA polymerase beta subunit JYA99_RS24055 PF00562 RNA polymerase Rpb2, domain 6 JYA99_RS24055 PF04560 RNA polymerase Rpb2, domain 7 JYA99_RS24060 PF16320 Ribosomal protein L7/L12 dimerisation domain JYA99_RS24060 PF00542 Ribosomal protein L7/L12 C-terminal domain JYA99_RS24065 PF00466 Ribosomal protein L10 JYA99_RS24070 PF00687 Ribosomal protein L1p/L10e family JYA99_RS24075 PF00298 Ribosomal protein L11, RNA binding domain JYA99_RS24075 PF03946 Ribosomal protein L11, N-terminal domain JYA99_RS24080 PF02357 Transcription termination factor nusG JYA99_RS24080 PF00467 KOW motif JYA99_RS24085 PF00584 SecE/Sec61-gamma subunits of protein translocation complex JYA99_RS24090 PF00009 Elongation factor Tu GTP binding domain JYA99_RS24090 PF03143 Elongation factor Tu C-terminal domain JYA99_RS24090 PF03144 Elongation factor Tu domain 2 JYA99_RS24115 PF00485 Phosphoribulokinase / Uridine kinase family JYA99_RS24120 PF08279 HTH domain JYA99_RS24120 PF03099 Biotin/lipoate A/B protein ligase family JYA99_RS24120 PF02237 Biotin protein ligase C terminal domain JYA99_RS24125 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain JYA99_RS24125 PF01565 FAD binding domain JYA99_RS24155 PF12724 Flavodoxin domain JYA99_RS24160 PF02386 Cation transport protein JYA99_RS24165 PF01205 Uncharacterized protein family UPF0029 JYA99_RS24165 PF09186 Domain of unknown function (DUF1949) JYA99_RS24170 PF00557 Metallopeptidase family M24 JYA99_RS24175 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JYA99_RS24175 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JYA99_RS24175 PF00378 Enoyl-CoA hydratase/isomerase JYA99_RS24180 PF02803 Thiolase, C-terminal domain JYA99_RS24180 PF00108 Thiolase, N-terminal domain JYA99_RS24185 PF00175 Oxidoreductase NAD-binding domain JYA99_RS24185 PF00970 Oxidoreductase FAD-binding domain JYA99_RS24190 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase JYA99_RS24195 PF02357 Transcription termination factor nusG JYA99_RS24200 PF01026 TatD related DNase JYA99_RS24205 PF00902 Sec-independent protein translocase protein (TatC) JYA99_RS24215 PF02416 mttA/Hcf106 family JYA99_RS24220 PF03109 ABC1 family JYA99_RS24225 PF02036 SCP-2 sterol transfer family JYA99_RS24230 PF01209 ubiE/COQ5 methyltransferase family JYA99_RS24235 PF02646 RmuC family JYA99_RS24240 PF01048 Phosphorylase superfamily JYA99_RS24245 PF01738 Dienelactone hydrolase family JYA99_RS24250 PF08267 Cobalamin-independent synthase, N-terminal domain JYA99_RS24250 PF01717 Cobalamin-independent synthase, Catalytic domain JYA99_RS24255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYA99_RS24255 PF03466 LysR substrate binding domain JYA99_RS24260 PF00892 EamA-like transporter family JYA99_RS24270 PF12146 Serine aminopeptidase, S33 JYA99_RS24275 PF01810 LysE type translocator JYA99_RS24280 PF04754 Putative transposase, YhgA-like JYA99_RS24285 PF01810 LysE type translocator JYA99_RS24290 PF00270 DEAD/DEAH box helicase JYA99_RS24290 PF09382 RQC domain JYA99_RS24290 PF00271 Helicase conserved C-terminal domain JYA99_RS24290 PF00570 HRDC domain JYA99_RS24290 PF16124 RecQ zinc-binding JYA99_RS24295 PF02253 Phospholipase A1 JYA99_RS24300 PF03061 Thioesterase superfamily JYA99_RS24305 PF00892 EamA-like transporter family JYA99_RS24310 PF01544 CorA-like Mg2+ transporter protein JYA99_RS24315 PF00580 UvrD/REP helicase N-terminal domain JYA99_RS24315 PF13361 UvrD-like helicase C-terminal domain JYA99_RS24320 PF13419 Haloacid dehalogenase-like hydrolase JYA99_RS24325 PF02899 Phage integrase, N-terminal SAM-like domain JYA99_RS24325 PF00589 Phage integrase family JYA99_RS24330 PF04340 Protein of unknown function, DUF484 JYA99_RS24335 PF01678 Diaminopimelate epimerase JYA99_RS24340 PF13627 Prokaryotic lipoprotein-attachment site JYA99_RS24345 PF01491 Frataxin-like domain JYA99_RS24350 PF12633 Adenylate cyclase NT domain JYA99_RS24350 PF01295 Adenylate cyclase, class-I JYA99_RS24355 PF03900 Porphobilinogen deaminase, C-terminal domain JYA99_RS24355 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain JYA99_RS24360 PF02602 Uroporphyrinogen-III synthase HemD JYA99_RS24365 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase JYA99_RS24370 PF07219 HemY protein N-terminus JYA99_RS24370 PF07719 Tetratricopeptide repeat JYA99_RS24395 PF00324 Amino acid permease JYA99_RS24400 PF03808 Glycosyl transferase WecB/TagA/CpsF family JYA99_RS24405 PF06899 WzyE protein, O-antigen assembly polymerase JYA99_RS24410 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 JYA99_RS24415 PF01943 Polysaccharide biosynthesis protein JYA99_RS24420 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family JYA99_RS24430 PF00483 Nucleotidyl transferase JYA99_RS24435 PF16363 GDP-mannose 4,6 dehydratase JYA99_RS24440 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JYA99_RS24440 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JYA99_RS24440 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JYA99_RS24445 PF02350 UDP-N-acetylglucosamine 2-epimerase JYA99_RS24450 PF02706 Chain length determinant protein JYA99_RS24455 PF00953 Glycosyl transferase family 4 JYA99_RS24460 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JYA99_RS24460 PF07497 Rho termination factor, RNA-binding domain JYA99_RS24460 PF07498 Rho termination factor, N-terminal domain JYA99_RS24465 PF00085 Thioredoxin JYA99_RS24470 PF00271 Helicase conserved C-terminal domain JYA99_RS24470 PF00270 DEAD/DEAH box helicase JYA99_RS24475 PF02541 Ppx/GppA phosphatase family JYA99_RS24480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYA99_RS24480 PF03466 LysR substrate binding domain JYA99_RS24490 PF04474 Protein of unknown function (DUF554) JYA99_RS24495 PF00580 UvrD/REP helicase N-terminal domain JYA99_RS24495 PF13361 UvrD-like helicase C-terminal domain JYA99_RS24510 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain JYA99_RS24510 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain JYA99_RS24515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYA99_RS24515 PF03466 LysR substrate binding domain JYA99_RS24520 PF00291 Pyridoxal-phosphate dependent enzyme JYA99_RS24520 PF00585 C-terminal regulatory domain of Threonine dehydratase JYA99_RS24525 PF00920 Dehydratase family JYA99_RS24530 PF01063 Amino-transferase class IV JYA99_RS24540 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JYA99_RS24540 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JYA99_RS24540 PF00205 Thiamine pyrophosphate enzyme, central domain JYA99_RS24550 PF08046 IlvGEDA operon leader peptide JYA99_RS24555 PF13335 Magnesium chelatase, subunit ChlI C-terminal JYA99_RS24555 PF01078 Magnesium chelatase, subunit ChlI JYA99_RS24560 PF04219 Protein of unknown function, DUF JYA99_RS24565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYA99_RS24565 PF03466 LysR substrate binding domain JYA99_RS24605 PF01177 Asp/Glu/Hydantoin racemase JYA99_RS24610 PF00593 TonB dependent receptor JYA99_RS24610 PF07715 TonB-dependent Receptor Plug Domain JYA99_RS24615 PF05958 tRNA (Uracil-5-)-methyltransferase JYA99_RS24620 PF07226 Protein of unknown function (DUF1422) JYA99_RS24625 PF00440 Bacterial regulatory proteins, tetR family JYA99_RS24630 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JYA99_RS24630 PF07992 Pyridine nucleotide-disulphide oxidoreductase JYA99_RS24635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYA99_RS24635 PF03466 LysR substrate binding domain JYA99_RS24640 PF14698 Argininosuccinate lyase C-terminal JYA99_RS24640 PF00206 Lyase JYA99_RS24645 PF00696 Amino acid kinase family JYA99_RS24650 PF01118 Semialdehyde dehydrogenase, NAD binding domain JYA99_RS24650 PF02774 Semialdehyde dehydrogenase, dimerisation domain JYA99_RS24655 PF07687 Peptidase dimerisation domain JYA99_RS24655 PF01546 Peptidase family M20/M25/M40 JYA99_RS24660 PF00311 Phosphoenolpyruvate carboxylase JYA99_RS24665 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment JYA99_RS24670 PF12833 Helix-turn-helix domain JYA99_RS24675 PF00923 Transaldolase/Fructose-6-phosphate aldolase JYA99_RS24680 PF00465 Iron-containing alcohol dehydrogenase JYA99_RS24685 PF00892 EamA-like transporter family JYA99_RS24690 PF02219 Methylenetetrahydrofolate reductase JYA99_RS24695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYA99_RS24695 PF03466 LysR substrate binding domain JYA99_RS24700 PF02627 Carboxymuconolactone decarboxylase family JYA99_RS24705 PF02872 5'-nucleotidase, C-terminal domain JYA99_RS24705 PF00149 Calcineurin-like phosphoesterase JYA99_RS24715 PF00742 Homoserine dehydrogenase JYA99_RS24715 PF00696 Amino acid kinase family JYA99_RS24715 PF03447 Homoserine dehydrogenase, NAD binding domain JYA99_RS24720 PF01053 Cys/Met metabolism PLP-dependent enzyme JYA99_RS24725 PF01340 Met Apo-repressor, MetJ JYA99_RS24730 PF01197 Ribosomal protein L31 JYA99_RS24735 PF00271 Helicase conserved C-terminal domain JYA99_RS24735 PF18074 Primosomal protein N C-terminal domain JYA99_RS24735 PF00270 DEAD/DEAH box helicase JYA99_RS24735 PF18319 PriA DNA helicase Cys-rich region (CRR) domain JYA99_RS24735 PF17764 3′ DNA-binding domain (3′BD) JYA99_RS24740 PF00356 Bacterial regulatory proteins, lacI family JYA99_RS24745 PF05036 Sporulation related domain JYA99_RS24750 PF00227 Proteasome subunit JYA99_RS24755 PF00004 ATPase family associated with various cellular activities (AAA) JYA99_RS24755 PF10431 C-terminal, D2-small domain, of ClpB protein JYA99_RS24755 PF07724 AAA domain (Cdc48 subfamily) JYA99_RS24760 PF01040 UbiA prenyltransferase family JYA99_RS24765 PF03737 Aldolase/RraA JYA99_RS24770 PF00365 Phosphofructokinase JYA99_RS24775 PF01545 Cation efflux family JYA99_RS24775 PF16916 Dimerisation domain of Zinc Transporter JYA99_RS24780 PF07813 LTXXQ motif family protein JYA99_RS24785 PF00072 Response regulator receiver domain JYA99_RS24785 PF00486 Transcriptional regulatory protein, C terminal JYA99_RS24790 PF00672 HAMP domain JYA99_RS24790 PF00512 His Kinase A (phospho-acceptor) domain JYA99_RS24790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYA99_RS24790 PF16527 Two-component sensor protein CpxA, periplasmic domain JYA99_RS24795 PF03473 MOSC domain JYA99_RS24795 PF03475 3-alpha domain JYA99_RS24800 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain JYA99_RS24800 PF02777 Iron/manganese superoxide dismutases, C-terminal domain JYA99_RS24805 PF06379 L-rhamnose-proton symport protein (RhaT) JYA99_RS24810 PF12833 Helix-turn-helix domain JYA99_RS24810 PF02311 AraC-like ligand binding domain JYA99_RS24815 PF12833 Helix-turn-helix domain JYA99_RS24815 PF02311 AraC-like ligand binding domain JYA99_RS24820 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JYA99_RS24820 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JYA99_RS24825 PF06134 L-rhamnose isomerase (RhaA) JYA99_RS24830 PF00596 Class II Aldolase and Adducin N-terminal domain JYA99_RS24835 PF13407 Periplasmic binding protein domain JYA99_RS24840 PF00005 ABC transporter JYA99_RS24845 PF02653 Branched-chain amino acid transport system / permease component JYA99_RS24850 PF02653 Branched-chain amino acid transport system / permease component JYA99_RS24855 PF00465 Iron-containing alcohol dehydrogenase JYA99_RS24860 PF05336 L-rhamnose mutarotase JYA99_RS24865 PF01306 LacY proton/sugar symporter JYA99_RS24870 PF16875 Glycosyl hydrolase family 36 N-terminal domain JYA99_RS24870 PF16874 Glycosyl hydrolase family 36 C-terminal domain JYA99_RS24875 PF00356 Bacterial regulatory proteins, lacI family JYA99_RS24875 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JYA99_RS24900 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JYA99_RS24910 PF01116 Fructose-bisphosphate aldolase class-II JYA99_RS24915 PF03611 PTS system sugar-specific permease component JYA99_RS24925 PF00365 Phosphofructokinase JYA99_RS24935 PF02634 FdhD/NarQ family JYA99_RS24945 PF13247 4Fe-4S dicluster domain JYA99_RS24945 PF09163 Formate dehydrogenase N, transmembrane JYA99_RS24950 PF01292 Prokaryotic cytochrome b561 JYA99_RS24955 PF04216 Protein involved in formate dehydrogenase formation JYA99_RS24970 PF07859 alpha/beta hydrolase fold JYA99_RS24975 PF00583 Acetyltransferase (GNAT) family JYA99_RS24975 PF09500 Putative thioesterase (yiiD_Cterm) JYA99_RS24980 PF02580 D-Tyr-tRNA(Tyr) deacylase JYA99_RS24985 PF03631 Virulence factor BrkB JYA99_RS24990 PF13419 Haloacid dehalogenase-like hydrolase JYA99_RS24995 PF00009 Elongation factor Tu GTP binding domain JYA99_RS24995 PF00679 Elongation factor G C-terminus JYA99_RS24995 PF03144 Elongation factor Tu domain 2 JYA99_RS25000 PF03951 Glutamine synthetase, beta-Grasp domain JYA99_RS25000 PF00120 Glutamine synthetase, catalytic domain JYA99_RS25005 PF00512 His Kinase A (phospho-acceptor) domain JYA99_RS25005 PF00989 PAS fold JYA99_RS25005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYA99_RS25010 PF00158 Sigma-54 interaction domain JYA99_RS25010 PF02954 Bacterial regulatory protein, Fis family JYA99_RS25010 PF00072 Response regulator receiver domain JYA99_RS25020 PF06969 HemN C-terminal domain JYA99_RS25020 PF04055 Radical SAM superfamily JYA99_RS25025 PF04220 Der GTPase activator (YihI) JYA99_RS25030 PF01926 50S ribosome-binding GTPase JYA99_RS25035 PF01612 3'-5' exonuclease JYA99_RS25035 PF00476 DNA polymerase family A JYA99_RS25035 PF01367 5'-3' exonuclease, C-terminal SAM fold JYA99_RS25035 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain JYA99_RS25040 PF01553 Acyltransferase JYA99_RS25045 PF01323 DSBA-like thioredoxin domain JYA99_RS25050 PF01636 Phosphotransferase enzyme family JYA99_RS25055 PF06288 Protein of unknown function (DUF1040) JYA99_RS25060 PF12804 MobA-like NTP transferase domain JYA99_RS25065 PF03205 Molybdopterin guanine dinucleotide synthesis protein B JYA99_RS25085 PF00392 Bacterial regulatory proteins, gntR family JYA99_RS25085 PF07729 FCD domain JYA99_RS25090 PF07690 Major Facilitator Superfamily JYA99_RS25095 PF00356 Bacterial regulatory proteins, lacI family JYA99_RS25100 PF00294 pfkB family carbohydrate kinase JYA99_RS25105 PF13407 Periplasmic binding protein domain JYA99_RS25110 PF02653 Branched-chain amino acid transport system / permease component JYA99_RS25115 PF00005 ABC transporter JYA99_RS25120 PF05025 RbsD / FucU transport protein family JYA99_RS25125 PF02705 K+ potassium transporter JYA99_RS25130 PF12592 Protein of unknown function (DUF3763) JYA99_RS25130 PF17868 AAA lid domain JYA99_RS25130 PF07728 AAA domain (dynein-related subfamily) JYA99_RS25135 PF05762 VWA domain containing CoxE-like protein JYA99_RS25140 PF03590 Aspartate-ammonia ligase JYA99_RS25145 PF01037 Lrp/AsnC ligand binding domain JYA99_RS25150 PF00258 Flavodoxin JYA99_RS25155 PF01134 Glucose inhibited division protein A JYA99_RS25155 PF13932 GidA associated domain JYA99_RS25160 PF02527 rRNA small subunit methyltransferase G JYA99_RS25165 PF03899 ATP synthase I chain JYA99_RS25170 PF00119 ATP synthase A chain JYA99_RS25175 PF00137 ATP synthase subunit C JYA99_RS25180 PF00430 ATP synthase B/B' CF(0) JYA99_RS25185 PF00213 ATP synthase delta (OSCP) subunit JYA99_RS25190 PF02874 ATP synthase alpha/beta family, beta-barrel domain JYA99_RS25190 PF00306 ATP synthase alpha/beta chain, C terminal domain JYA99_RS25190 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JYA99_RS25195 PF00231 ATP synthase JYA99_RS25200 PF02874 ATP synthase alpha/beta family, beta-barrel domain JYA99_RS25200 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JYA99_RS25205 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain JYA99_RS25205 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain JYA99_RS25210 PF12804 MobA-like NTP transferase domain JYA99_RS25210 PF00132 Bacterial transferase hexapeptide (six repeats) JYA99_RS25215 PF01380 SIS domain JYA99_RS25220 PF12849 PBP superfamily domain JYA99_RS25225 PF00528 Binding-protein-dependent transport system inner membrane component JYA99_RS25230 PF00528 Binding-protein-dependent transport system inner membrane component JYA99_RS25235 PF00005 ABC transporter JYA99_RS25240 PF01895 PhoU domain JYA99_RS25245 PF11471 Maltoporin periplasmic N-terminal extension JYA99_RS25245 PF02264 LamB porin JYA99_RS25250 PF00756 Putative esterase JYA99_RS25250 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JYA99_RS25255 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase JYA99_RS25260 PF13419 Haloacid dehalogenase-like hydrolase JYA99_RS25265 PF00860 Permease family JYA99_RS25270 PF03358 NADPH-dependent FMN reductase JYA99_RS25280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYA99_RS25280 PF03466 LysR substrate binding domain JYA99_RS25285 PF07690 Major Facilitator Superfamily JYA99_RS25295 PF10396 GTP-binding protein TrmE N-terminus JYA99_RS25295 PF12631 MnmE helical domain JYA99_RS25295 PF01926 50S ribosome-binding GTPase JYA99_RS25300 PF02096 60Kd inner membrane protein JYA99_RS25300 PF14849 YidC periplasmic domain JYA99_RS25305 PF01809 Putative membrane protein insertion efficiency factor JYA99_RS25310 PF00825 Ribonuclease P JYA99_RS25315 PF00468 Ribosomal protein L34 JYA99_RS25330 PF08242 Methyltransferase domain JYA99_RS25345 PF00196 Bacterial regulatory proteins, luxR family JYA99_RS25350 PF00892 EamA-like transporter family JYA99_RS25360 PF07715 TonB-dependent Receptor Plug Domain JYA99_RS25360 PF00593 TonB dependent receptor JYA99_RS25365 PF11806 Domain of unknown function (DUF3327) JYA99_RS25365 PF00756 Putative esterase JYA99_RS25370 PF00005 ABC transporter JYA99_RS25370 PF00664 ABC transporter transmembrane region JYA99_RS25375 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase JYA99_RS25385 PF02195 ParB-like nuclease domain JYA99_RS25390 PF01507 Phosphoadenosine phosphosulfate reductase family JYA99_RS25390 PF11922 Domain of unknown function (DUF3440) JYA99_RS25400 PF00665 Integrase core domain JYA99_RS25400 PF13276 HTH-like domain JYA99_RS25400 PF13333 Integrase core domain JYA99_RS25405 PF04542 Sigma-70 region 2 JYA99_RS25405 PF08281 Sigma-70, region 4 JYA99_RS25415 PF07715 TonB-dependent Receptor Plug Domain JYA99_RS25415 PF07660 Secretin and TonB N terminus short domain JYA99_RS25415 PF00593 TonB dependent receptor JYA99_RS25420 PF01497 Periplasmic binding protein JYA99_RS25435 PF09722 Protein of unknown function (DUF2384) JYA99_RS25440 PF08808 RES domain JYA99_RS25455 PF00565 Staphylococcal nuclease homologue JYA99_RS25460 PF00816 H-NS histone family JYA99_RS25465 PF00248 Aldo/keto reductase family JYA99_RS25490 PF12911 N-terminal TM domain of oligopeptide transport permease C JYA99_RS25490 PF00528 Binding-protein-dependent transport system inner membrane component JYA99_RS25500 PF07690 Major Facilitator Superfamily JYA99_RS25505 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JYA99_RS25505 PF00005 ABC transporter JYA99_RS25510 PF00005 ABC transporter JYA99_RS25510 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JYA99_RS25535 PF01475 Ferric uptake regulator family JYA99_RS25540 PF01502 Phosphoribosyl-AMP cyclohydrolase JYA99_RS25545 PF02492 CobW/HypB/UreG, nucleotide-binding domain JYA99_RS25545 PF07683 Cobalamin synthesis protein cobW C-terminal domain JYA99_RS25570 PF02492 CobW/HypB/UreG, nucleotide-binding domain JYA99_RS25570 PF07683 Cobalamin synthesis protein cobW C-terminal domain JYA99_RS25575 PF01258 Prokaryotic dksA/traR C4-type zinc finger JYA99_RS25580 PF02649 Type I GTP cyclohydrolase folE2 JYA99_RS25585 PF00132 Bacterial transferase hexapeptide (six repeats) JYA99_RS25600 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JYA99_RS25600 PF02824 TGS domain JYA99_RS25600 PF03129 Anticodon binding domain JYA99_RS25600 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JYA99_RS25610 PF01979 Amidohydrolase family JYA99_RS25615 PF00490 Delta-aminolevulinic acid dehydratase JYA99_RS25645 PF05321 Haemolysin expression modulating protein JYA99_RS25655 PF13700 Domain of unknown function (DUF4158) JYA99_RS25655 PF01526 Tn3 transposase DDE domain JYA99_RS25660 PF00239 Resolvase, N terminal domain JYA99_RS25660 PF02796 Helix-turn-helix domain of resolvase JYA99_RS25665 PF01252 Signal peptidase (SPase) II JYA99_RS25670 PF00403 Heavy-metal-associated domain JYA99_RS25675 PF13411 MerR HTH family regulatory protein JYA99_RS25680 PF00672 HAMP domain JYA99_RS25680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYA99_RS25680 PF00512 His Kinase A (phospho-acceptor) domain JYA99_RS25685 PF00072 Response regulator receiver domain JYA99_RS25685 PF00486 Transcriptional regulatory protein, C terminal JYA99_RS25690 PF05425 Copper resistance protein D JYA99_RS25695 PF04234 CopC domain JYA99_RS25700 PF05275 Copper resistance protein B precursor (CopB) JYA99_RS25705 PF00394 Multicopper oxidase JYA99_RS25705 PF07732 Multicopper oxidase JYA99_RS25705 PF07731 Multicopper oxidase JYA99_RS25715 PF08525 Opacity-associated protein A N-terminal motif JYA99_RS25715 PF01551 Peptidase family M23 JYA99_RS25715 PF01476 LysM domain JYA99_RS25725 PF04945 YHS domain JYA99_RS25735 PF00873 AcrB/AcrD/AcrF family JYA99_RS25740 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JYA99_RS25745 PF11604 Copper binding periplasmic protein CusF JYA99_RS25750 PF02321 Outer membrane efflux protein JYA99_RS25755 PF00486 Transcriptional regulatory protein, C terminal JYA99_RS25755 PF00072 Response regulator receiver domain JYA99_RS25760 PF00512 His Kinase A (phospho-acceptor) domain JYA99_RS25760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYA99_RS25760 PF00672 HAMP domain JYA99_RS25780 PF00990 Diguanylate cyclase, GGDEF domain JYA99_RS25790 PF00589 Phage integrase family JYA99_RS25795 PF04754 Putative transposase, YhgA-like JYA99_RS25800 PF03400 IS1 transposase JYA99_RS25805 PF13737 Transposase DDE domain JYA99_RS25815 PF00005 ABC transporter JYA99_RS25825 PF01032 FecCD transport family JYA99_RS25845 PF02492 CobW/HypB/UreG, nucleotide-binding domain JYA99_RS25845 PF07683 Cobalamin synthesis protein cobW C-terminal domain JYA99_RS25865 PF01327 Polypeptide deformylase JYA99_RS25890 PF06276 Ferric iron reductase FhuF-like transporter JYA99_RS25890 PF04183 IucA / IucC family JYA99_RS25900 PF06276 Ferric iron reductase FhuF-like transporter JYA99_RS25900 PF04183 IucA / IucC family JYA99_RS25905 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) JYA99_RS25910 PF00593 TonB dependent receptor JYA99_RS25910 PF07715 TonB-dependent Receptor Plug Domain JYA99_RS25965 PF01850 PIN domain JYA99_RS25970 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin JYA99_RS25995 PF10137 Predicted nucleotide-binding protein containing TIR-like domain JYA99_RS26000 PF07693 KAP family P-loop domain JYA99_RS26015 PF13404 AsnC-type helix-turn-helix domain JYA99_RS26015 PF01037 Lrp/AsnC ligand binding domain JYA99_RS26020 PF00892 EamA-like transporter family JYA99_RS26025 PF01548 Transposase JYA99_RS26025 PF02371 Transposase IS116/IS110/IS902 family JYA99_RS26030 PF14765 Polyketide synthase dehydratase JYA99_RS26030 PF00698 Acyl transferase domain JYA99_RS26030 PF16197 Ketoacyl-synthetase C-terminal extension JYA99_RS26030 PF00109 Beta-ketoacyl synthase, N-terminal domain JYA99_RS26030 PF08659 KR domain JYA99_RS26030 PF00550 Phosphopantetheine attachment site JYA99_RS26030 PF02801 Beta-ketoacyl synthase, C-terminal domain JYA99_RS26030 PF08240 Alcohol dehydrogenase GroES-like domain JYA99_RS26040 PF01526 Tn3 transposase DDE domain JYA99_RS26040 PF13700 Domain of unknown function (DUF4158) JYA99_RS26050 PF00561 alpha/beta hydrolase fold JYA99_RS26070 PF02342 TerD domain JYA99_RS26075 PF02342 TerD domain JYA99_RS26080 PF02342 TerD domain JYA99_RS26085 PF03741 Integral membrane protein TerC family JYA99_RS26090 PF05099 Tellurite resistance protein TerB JYA99_RS26095 PF02342 TerD domain JYA99_RS26100 PF02342 TerD domain JYA99_RS26120 PF11202 Phosphoribosyl transferase (PRTase) JYA99_RS26120 PF15608 PELOTA RNA binding domain JYA99_RS26140 PF00092 von Willebrand factor type A domain JYA99_RS26145 PF02342 TerD domain JYA99_RS26150 PF00092 von Willebrand factor type A domain JYA99_RS26155 PF00092 von Willebrand factor type A domain JYA99_RS26195 PF01278 Omptin family JYA99_RS26205 PF01051 Initiator Replication protein JYA99_RS26215 PF05321 Haemolysin expression modulating protein JYA99_RS26225 PF13737 Transposase DDE domain JYA99_RS26240 PF01695 IstB-like ATP binding protein JYA99_RS26270 PF01051 Initiator Replication protein JYA99_RS26275 PF13614 AAA domain JYA99_RS26280 PF02195 ParB-like nuclease domain JYA99_RS26280 PF18090 Centromere-binding protein HTH domain JYA99_RS26305 PF05717 IS66 Orf2 like protein JYA99_RS26310 PF13817 IS66 C-terminal element JYA99_RS26310 PF13005 zinc-finger binding domain of transposase IS66 JYA99_RS26310 PF03050 Transposase IS66 family JYA99_RS26310 PF13007 Transposase C of IS166 homeodomain JYA99_RS26350 PF13737 Transposase DDE domain JYA99_RS26370 PF13737 Transposase DDE domain JYA99_RS26410 PF03050 Transposase IS66 family JYA99_RS26410 PF13817 IS66 C-terminal element JYA99_RS26410 PF13007 Transposase C of IS166 homeodomain JYA99_RS26410 PF13005 zinc-finger binding domain of transposase IS66 JYA99_RS26415 PF05717 IS66 Orf2 like protein JYA99_RS26440 PF18090 Centromere-binding protein HTH domain JYA99_RS26440 PF02195 ParB-like nuclease domain JYA99_RS26445 PF13614 AAA domain JYA99_RS26450 PF01051 Initiator Replication protein JYA99_RS26480 PF01695 IstB-like ATP binding protein JYA99_RS26495 PF13737 Transposase DDE domain JYA99_RS26500 PF01051 Initiator Replication protein JYA99_RS26505 PF13614 AAA domain JYA99_RS26515 PF00589 Phage integrase family JYA99_RS26535 PF01845 CcdB protein JYA99_RS26540 PF07362 Post-segregation antitoxin CcdA JYA99_RS26590 PF05321 Haemolysin expression modulating protein JYA99_RS26635 PF02387 IncFII RepA protein family JYA99_RS26645 PF10723 Replication regulatory protein RepB JYA99_RS26655 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JYA99_RS26655 PF08447 PAS fold JYA99_RS26660 PF13610 DDE domain JYA99_RS26670 PF00145 C-5 cytosine-specific DNA methylase JYA99_RS26670 PF18284 DNA methylase N-terminal domain JYA99_RS26710 PF01464 Transglycosylase SLT domain JYA99_RS26730 PF03135 CagE, TrbE, VirB family, component of type IV transporter system JYA99_RS26750 PF04335 VirB8 protein JYA99_RS26760 PF03743 Bacterial conjugation TrbI-like protein JYA99_RS26765 PF00437 Type II/IV secretion system protein JYA99_RS26770 PF13091 PLD-like domain JYA99_RS26770 PF13396 Phospholipase_D-nuclease N-terminal JYA99_RS26785 PF13610 DDE domain JYA99_RS26795 PF13599 Pentapeptide repeats (9 copies) JYA99_RS26800 PF02796 Helix-turn-helix domain of resolvase JYA99_RS26800 PF00239 Resolvase, N terminal domain JYA99_RS26815 PF02796 Helix-turn-helix domain of resolvase JYA99_RS26815 PF00239 Resolvase, N terminal domain JYA99_RS26830 PF00166 Chaperonin 10 Kd subunit JYA99_RS26835 PF03091 CutA1 divalent ion tolerance protein JYA99_RS26840 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JYA99_RS26845 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase JYA99_RS26855 PF00753 Metallo-beta-lactamase superfamily JYA99_RS26875 PF13610 DDE domain JYA99_RS26890 PF00440 Bacterial regulatory proteins, tetR family JYA99_RS26890 PF02909 Tetracyclin repressor-like, C-terminal domain JYA99_RS26895 PF07690 Major Facilitator Superfamily JYA99_RS26900 PF00892 EamA-like transporter family JYA99_RS26940 PF02796 Helix-turn-helix domain of resolvase JYA99_RS26940 PF00239 Resolvase, N terminal domain JYA99_RS26970 PF12602 Fertility inhibition protein N terminal JYA99_RS26970 PF04352 ProQ/FINO family JYA99_RS26975 PF05857 TraX protein JYA99_RS26980 PF08751 TrwC relaxase JYA99_RS26980 PF07057 DNA helicase TraI JYA99_RS26980 PF18272 single-stranded DNA binding TraI N-terminal subdomain JYA99_RS26980 PF18340 DNA relaxase TraI 2B/2B-like domain JYA99_RS26995 PF05818 Enterobacterial TraT complement resistance protein JYA99_RS27005 PF07916 TraG-like protein, N-terminal region JYA99_RS27010 PF06122 Conjugative relaxosome accessory transposon protein JYA99_RS27020 PF13728 F plasmid transfer operon protein JYA99_RS27025 PF09679 Type-F conjugative transfer system pilin chaperone (TraQ) JYA99_RS27030 PF13728 F plasmid transfer operon protein JYA99_RS27045 PF11100 Conjugal transfer protein TrbE JYA99_RS27050 PF06986 Type-1V conjugative transfer system mating pair stabilisation JYA99_RS27055 PF09673 Type-F conjugative transfer system pilin assembly protein JYA99_RS27060 PF06834 TraU protein JYA99_RS27070 PF12477 Sex factor F TraW protein N terminal JYA99_RS27075 PF09677 Type-F conjugative transfer system protein (TrbI_Ftype) JYA99_RS27080 PF11130 F pilus assembly Type-IV secretion system for plasmid transfer JYA99_RS27110 PF09676 Type IV conjugative transfer system lipoprotein (TraV) JYA99_RS27115 PF03743 Bacterial conjugation TrbI-like protein JYA99_RS27120 PF06586 TraK protein JYA99_RS27125 PF05309 TraE protein JYA99_RS27130 PF07178 TraL protein JYA99_RS27135 PF05513 TraA JYA99_RS27140 PF05509 TraY domain JYA99_RS27150 PF05261 TraM protein, DNA-binding JYA99_RS27155 PF01464 Transglycosylase SLT domain JYA99_RS27165 PF06067 Domain of unknown function (DUF932) JYA99_RS27170 PF00872 Transposase, Mutator family JYA99_RS27175 PF01381 Helix-turn-helix JYA99_RS27220 PF01848 Hok/gef family JYA99_RS27240 PF06290 Plasmid SOS inhibition protein (PsiB) JYA99_RS27245 PF02195 ParB-like nuclease domain JYA99_RS27250 PF06006 Bacterial protein of unknown function (DUF905) JYA99_RS27255 PF00436 Single-strand binding protein family JYA99_RS27285 PF06440 DNA polymerase III, theta subunit JYA99_RS27300 PF03230 Antirestriction protein JYA99_RS27310 PF07128 Protein of unknown function (DUF1380) JYA99_RS27320 PF01555 DNA methylase JYA99_RS27335 PF06406 StbA protein JYA99_RS27340 PF00717 Peptidase S24-like JYA99_RS27345 PF11799 impB/mucB/samB family C-terminal domain JYA99_RS27345 PF00817 impB/mucB/samB family JYA99_RS27345 PF13438 Domain of unknown function (DUF4113) JYA99_RS27350 PF01051 Initiator Replication protein JYA99_RS27380 PF01695 IstB-like ATP binding protein JYA99_RS27395 PF13737 Transposase DDE domain JYA99_RS27435 PF13005 zinc-finger binding domain of transposase IS66 JYA99_RS27435 PF13007 Transposase C of IS166 homeodomain JYA99_RS27435 PF03050 Transposase IS66 family JYA99_RS27435 PF13817 IS66 C-terminal element JYA99_RS27440 PF05717 IS66 Orf2 like protein JYA99_RS27465 PF18090 Centromere-binding protein HTH domain JYA99_RS27465 PF02195 ParB-like nuclease domain JYA99_RS27470 PF13614 AAA domain