CTI66_RS00005	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS00005	SM00760	Bacterial dnaA protein helix-turn-helix domain
CTI66_RS00010	SM00480	DNA polymerase III beta subunit
CTI66_RS00020	SM00387	Histidine kinase-like ATPases
CTI66_RS00020	SM00433	TopoisomeraseII
CTI66_RS00040	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CTI66_RS00040	SM00895	CTI66_RS00040
CTI66_RS00055	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CTI66_RS00095	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CTI66_RS00095	SM00866	CTI66_RS00095
CTI66_RS00175	SM00421	helix_turn_helix, Lux Regulon
CTI66_RS00175	SM00448	cheY-homologous receiver domain
CTI66_RS00180	SM00387	Histidine kinase-like ATPases
CTI66_RS00200	SM00530	Helix-turn-helix XRE-family like proteins 
CTI66_RS00230	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CTI66_RS00230	SM00866	CTI66_RS00230
CTI66_RS00240	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS00275	SM00354	helix_turn _helix lactose operon repressor
CTI66_RS00400	SM00342	helix_turn_helix, arabinose operon control protein
CTI66_RS00420	SM00849	Metallo-beta-lactamase superfamily
CTI66_RS00425	SM00342	helix_turn_helix, arabinose operon control protein
CTI66_RS00430	SM00829	Enoylreductase
CTI66_RS00445	SM00829	Enoylreductase
CTI66_RS00560	SM00487	DEAD-like helicases superfamily
CTI66_RS00560	SM00490	helicase superfamily c-terminal domain
CTI66_RS00570	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CTI66_RS00570	SM00954	Region found in RelA / SpoT proteins
CTI66_RS00575	SM01409	CTI66_RS00575
CTI66_RS00580	SM00072	Guanylate kinase homologues.
CTI66_RS00585	SM00532	Ligase N family
CTI66_RS00600	SM00342	helix_turn_helix, arabinose operon control protein
CTI66_RS00630	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS00685	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
CTI66_RS00685	SM01232	CTI66_RS00685
CTI66_RS00765	SM00829	Enoylreductase
CTI66_RS00790	SM00450	Rhodanese Homology Domain
CTI66_RS00810	SM00971	Serine acetyltransferase, N-terminal
CTI66_RS00825	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CTI66_RS00825	SM00895	CTI66_RS00825
CTI66_RS00900	SM00642	Alpha-amylase domain
CTI66_RS00910	SM00047	Lysozyme subfamily 2
CTI66_RS00915	SM00342	helix_turn_helix, arabinose operon control protein
CTI66_RS00925	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS00990	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS00995	SM00357	Cold shock protein domain
CTI66_RS01000	SM00530	Helix-turn-helix XRE-family like proteins 
CTI66_RS01040	SM00354	helix_turn _helix lactose operon repressor
CTI66_RS01080	SM00248	ankyrin repeats
CTI66_RS01120	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS01125	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS01155	SM00028	Tetratricopeptide repeats
CTI66_RS01210	SM00028	Tetratricopeptide repeats
CTI66_RS01215	SM00052	Putative diguanylate phosphodiesterase
CTI66_RS01215	SM00267	diguanylate cyclase
CTI66_RS01215	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CTI66_RS01265	SM00822	CTI66_RS01265
CTI66_RS01300	SM00014	Acid phosphatase homologues
CTI66_RS01350	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS01355	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS01475	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS01475	SM00962	SRP54-type protein, GTPase domain
CTI66_RS01475	SM00963	SRP54-type protein, helical bundle domain
CTI66_RS01480	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS01495	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CTI66_RS01540	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS01545	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS01575	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS01620	SM00354	helix_turn _helix lactose operon repressor
CTI66_RS01640	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CTI66_RS01645	SM00642	Alpha-amylase domain
CTI66_RS01650	SM00642	Alpha-amylase domain
CTI66_RS01675	SM00530	Helix-turn-helix XRE-family like proteins 
CTI66_RS01685	SM00450	Rhodanese Homology Domain
CTI66_RS01695	SM00420	helix_turn_helix, Deoxyribose operon repressor
CTI66_RS01695	SM01134	CTI66_RS01695
CTI66_RS01700	SM00421	helix_turn_helix, Lux Regulon
CTI66_RS01755	SM00899	CTI66_RS01755
CTI66_RS01760	SM00316	Ribosomal protein S1-like RNA-binding domain
CTI66_RS01760	SM00732	Likely ribonuclease with RNase H fold.
CTI66_RS01770	SM00448	cheY-homologous receiver domain
CTI66_RS01770	SM00862	Transcriptional regulatory protein, C terminal
CTI66_RS01775	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CTI66_RS01775	SM00387	Histidine kinase-like ATPases
CTI66_RS01775	SM00388	His Kinase A (phosphoacceptor) domain
CTI66_RS01790	SM00363	S4 RNA-binding domain
CTI66_RS01935	SM00100	Cyclic nucleotide-monophosphate binding domain
CTI66_RS01935	SM00419	helix_turn_helix, cAMP Regulatory protein
CTI66_RS01970	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS02040	SM00838	Elongation factor G C-terminus
CTI66_RS02040	SM00889	Elongation factor G, domain IV
CTI66_RS02070	SM01403	CTI66_RS02070
CTI66_RS02090	SM01382	CTI66_RS02090
CTI66_RS02090	SM01383	CTI66_RS02090
CTI66_RS02105	SM00322	K homology RNA-binding domain
CTI66_RS02125	SM01374	CTI66_RS02125
CTI66_RS02130	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
CTI66_RS02195	SM00363	S4 RNA-binding domain
CTI66_RS02195	SM01390	CTI66_RS02195
CTI66_RS02200	SM00662	RNA polymerases D
CTI66_RS02215	SM00422	helix_turn_helix, mercury resistance
CTI66_RS02365	SM00878	Biotin carboxylase C-terminal domain
CTI66_RS02400	SM00052	Putative diguanylate phosphodiesterase
CTI66_RS02400	SM00267	diguanylate cyclase
CTI66_RS02430	SM00316	Ribosomal protein S1-like RNA-binding domain
CTI66_RS02490	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CTI66_RS02495	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CTI66_RS02495	SM00895	CTI66_RS02495
CTI66_RS02535	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CTI66_RS02540	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CTI66_RS02600	SM00729	Elongator protein 3, MiaB family, Radical SAM
CTI66_RS02610	SM00829	Enoylreductase
CTI66_RS02620	SM00073	Histidine Phosphotransfer domain
CTI66_RS02620	SM00091	PAS domain
CTI66_RS02620	SM00387	Histidine kinase-like ATPases
CTI66_RS02620	SM00388	His Kinase A (phosphoacceptor) domain
CTI66_RS02620	SM00448	cheY-homologous receiver domain
CTI66_RS02660	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS02695	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS02770	SM01103	CTI66_RS02770
CTI66_RS02780	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS02835	SM00316	Ribosomal protein S1-like RNA-binding domain
CTI66_RS02855	SM01387	CTI66_RS02855
CTI66_RS02865	SM00316	Ribosomal protein S1-like RNA-binding domain
CTI66_RS02865	SM00322	K homology RNA-binding domain
CTI66_RS02870	SM00028	Tetratricopeptide repeats
CTI66_RS02880	SM00487	DEAD-like helicases superfamily
CTI66_RS02880	SM00490	helicase superfamily c-terminal domain
CTI66_RS02930	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CTI66_RS02940	SM00749	bacterial OsmY and nodulation domain
CTI66_RS02970	SM00420	helix_turn_helix, Deoxyribose operon repressor
CTI66_RS02970	SM01134	CTI66_RS02970
CTI66_RS02975	SM00829	Enoylreductase
CTI66_RS03020	SM00420	helix_turn_helix, Deoxyribose operon repressor
CTI66_RS03020	SM01134	CTI66_RS03020
CTI66_RS03030	SM00858	CTI66_RS03030
CTI66_RS03130	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CTI66_RS03130	SM00895	CTI66_RS03130
CTI66_RS03145	SM00858	CTI66_RS03145
CTI66_RS03175	SM00530	Helix-turn-helix XRE-family like proteins 
CTI66_RS03180	SM00873	B3/4 domain
CTI66_RS03205	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS03225	SM01133	CTI66_RS03225
CTI66_RS03255	SM01120	CTI66_RS03255
CTI66_RS03265	SM01120	CTI66_RS03265
CTI66_RS03295	SM00091	PAS domain
CTI66_RS03295	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS03360	SM00062	Bacterial periplasmic substrate-binding proteins
CTI66_RS03360	SM00073	Histidine Phosphotransfer domain
CTI66_RS03360	SM00387	Histidine kinase-like ATPases
CTI66_RS03360	SM00388	His Kinase A (phosphoacceptor) domain
CTI66_RS03360	SM00448	cheY-homologous receiver domain
CTI66_RS03365	SM00421	helix_turn_helix, Lux Regulon
CTI66_RS03365	SM00448	cheY-homologous receiver domain
CTI66_RS03385	SM00986	Uracil DNA glycosylase superfamily
CTI66_RS03385	SM00987	UreE urease accessory protein, C-terminal domain 
CTI66_RS03395	SM00400	zinc finger
CTI66_RS03395	SM00493	CTI66_RS03395
CTI66_RS03395	SM00766	DNA primase DnaG DnaB-binding
CTI66_RS03430	SM00988	UreE urease accessory protein, N-terminal domain
CTI66_RS03460	SM01207	CTI66_RS03460
CTI66_RS03465	SM00905	Dihydroneopterin aldolase
CTI66_RS03480	SM00287	Bacterial SH3 domain homologues
CTI66_RS03485	SM01118	CTI66_RS03485
CTI66_RS03560	SM00387	Histidine kinase-like ATPases
CTI66_RS03560	SM00433	TopoisomeraseII
CTI66_RS03575	SM00387	Histidine kinase-like ATPases
CTI66_RS03575	SM00388	His Kinase A (phosphoacceptor) domain
CTI66_RS03580	SM00448	cheY-homologous receiver domain
CTI66_RS03580	SM00862	Transcriptional regulatory protein, C terminal
CTI66_RS03590	SM00342	helix_turn_helix, arabinose operon control protein
CTI66_RS03590	SM00871	Bacterial transcription activator, effector binding domain
CTI66_RS03595	SM00434	DNA Topoisomerase IV
CTI66_RS03600	SM00563	Phosphate acyltransferases
CTI66_RS03610	SM00729	Elongator protein 3, MiaB family, Radical SAM
CTI66_RS03630	SM00342	helix_turn_helix, arabinose operon control protein
CTI66_RS03730	SM00116	Domain in cystathionine beta-synthase and other proteins.
CTI66_RS03775	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS03995	SM00530	Helix-turn-helix XRE-family like proteins 
CTI66_RS04000	SM00357	Cold shock protein domain
CTI66_RS04010	SM00530	Helix-turn-helix XRE-family like proteins 
CTI66_RS04105	SM00478	endonuclease III
CTI66_RS04105	SM00525	CTI66_RS04105
CTI66_RS04125	SM00729	Elongator protein 3, MiaB family, Radical SAM
CTI66_RS04135	SM01152	CTI66_RS04135
CTI66_RS04155	SM00421	helix_turn_helix, Lux Regulon
CTI66_RS04160	SM00732	Likely ribonuclease with RNase H fold.
CTI66_RS04185	SM00731	SprT homologues.
CTI66_RS04255	SM00346	helix_turn_helix isocitrate lyase regulation
CTI66_RS04315	SM00861	Transketolase, pyrimidine binding domain
CTI66_RS04320	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CTI66_RS04385	SM01011	Aminopeptidase P, N-terminal domain
CTI66_RS04450	SM01022	CTI66_RS04450
CTI66_RS04515	SM00257	Lysin motif
CTI66_RS04570	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CTI66_RS04625	SM00052	Putative diguanylate phosphodiesterase
CTI66_RS04690	SM00347	helix_turn_helix multiple antibiotic resistance protein
CTI66_RS04730	SM00052	Putative diguanylate phosphodiesterase
CTI66_RS04735	SM00421	helix_turn_helix, Lux Regulon
CTI66_RS04790	SM00354	helix_turn _helix lactose operon repressor
CTI66_RS04800	SM00640	Glycosyl hydrolases family 32
CTI66_RS04815	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS04850	SM00354	helix_turn _helix lactose operon repressor
CTI66_RS04865	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CTI66_RS04865	SM00895	CTI66_RS04865
CTI66_RS04875	SM00354	helix_turn _helix lactose operon repressor
CTI66_RS04890	SM00563	Phosphate acyltransferases
CTI66_RS04915	SM00927	DNA mismatch repair enzyme MutH
CTI66_RS04925	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CTI66_RS04975	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS04990	SM00646	CTI66_RS04990
CTI66_RS05015	SM00877	CTI66_RS05015
CTI66_RS05020	SM00877	CTI66_RS05020
CTI66_RS05060	SM00877	CTI66_RS05060
CTI66_RS05065	SM00877	CTI66_RS05065
CTI66_RS05095	SM00877	CTI66_RS05095
CTI66_RS05100	SM00877	CTI66_RS05100
CTI66_RS05110	SM00342	helix_turn_helix, arabinose operon control protein
CTI66_RS05190	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS05225	SM00925	MltA specific insert domain
CTI66_RS05265	SM00420	helix_turn_helix, Deoxyribose operon repressor
CTI66_RS05265	SM01134	CTI66_RS05265
CTI66_RS05290	SM01007	Class II Aldolase and Adducin N-terminal domain
CTI66_RS05300	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
CTI66_RS05300	SM00475	5'-3' exonuclease
CTI66_RS05305	SM00062	Bacterial periplasmic substrate-binding proteins
CTI66_RS05305	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS05325	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS05355	SM00062	Bacterial periplasmic substrate-binding proteins
CTI66_RS05405	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CTI66_RS05410	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CTI66_RS05425	SM00073	Histidine Phosphotransfer domain
CTI66_RS05425	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CTI66_RS05425	SM00387	Histidine kinase-like ATPases
CTI66_RS05425	SM00388	His Kinase A (phosphoacceptor) domain
CTI66_RS05425	SM00448	cheY-homologous receiver domain
CTI66_RS05435	SM00954	Region found in RelA / SpoT proteins
CTI66_RS05450	SM01192	CTI66_RS05450
CTI66_RS05450	SM01193	CTI66_RS05450
CTI66_RS05545	SM00257	Lysin motif
CTI66_RS05570	SM00347	helix_turn_helix multiple antibiotic resistance protein
CTI66_RS05600	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
CTI66_RS05600	SM00534	ATPase domain of DNA mismatch repair MUTS family
CTI66_RS05620	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS05680	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS05690	SM00354	helix_turn _helix lactose operon repressor
CTI66_RS05740	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CTI66_RS05740	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS05835	SM00354	helix_turn _helix lactose operon repressor
CTI66_RS05860	SM00849	Metallo-beta-lactamase superfamily
CTI66_RS05870	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CTI66_RS05870	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS05880	SM00420	helix_turn_helix, Deoxyribose operon repressor
CTI66_RS05880	SM01134	CTI66_RS05880
CTI66_RS05920	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS05940	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS05950	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CTI66_RS05990	SM00749	bacterial OsmY and nodulation domain
CTI66_RS06015	SM00342	helix_turn_helix, arabinose operon control protein
CTI66_RS06020	SM00917	LeuA allosteric (dimerisation) domain
CTI66_RS06035	SM00347	helix_turn_helix multiple antibiotic resistance protein
CTI66_RS06060	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS06090	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CTI66_RS06120	SM00528	Domain in histone-like proteins of HNS family
CTI66_RS06135	SM00450	Rhodanese Homology Domain
CTI66_RS06140	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CTI66_RS06155	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS06205	SM00421	helix_turn_helix, Lux Regulon
CTI66_RS06210	SM00062	Bacterial periplasmic substrate-binding proteins
CTI66_RS06230	SM01007	Class II Aldolase and Adducin N-terminal domain
CTI66_RS06235	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS06240	SM00062	Bacterial periplasmic substrate-binding proteins
CTI66_RS06280	SM00342	helix_turn_helix, arabinose operon control protein
CTI66_RS06285	SM00903	Flavin reductase like domain
CTI66_RS06390	SM01091	Transporter associated domain
CTI66_RS06400	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS06400	SM00962	SRP54-type protein, GTPase domain
CTI66_RS06400	SM00963	SRP54-type protein, helical bundle domain
CTI66_RS06440	SM00267	diguanylate cyclase
CTI66_RS06455	SM00830	Chorismate mutase type II
CTI66_RS06465	SM00830	Chorismate mutase type II
CTI66_RS06485	SM00363	S4 RNA-binding domain
CTI66_RS06495	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS06495	SM01086	C-terminal, D2-small domain, of ClpB protein
CTI66_RS06530	SM00155	Phospholipase D. Active site motifs.
CTI66_RS06535	SM00881	CoA binding domain
CTI66_RS06540	SM01144	CTI66_RS06540
CTI66_RS06555	SM00967	RNA 2'-O ribose methyltransferase substrate binding
CTI66_RS06560	SM00986	Uracil DNA glycosylase superfamily
CTI66_RS06560	SM00987	UreE urease accessory protein, C-terminal domain 
CTI66_RS06570	SM00487	DEAD-like helicases superfamily
CTI66_RS06570	SM00490	helicase superfamily c-terminal domain
CTI66_RS06615	SM00358	Double-stranded RNA binding motif
CTI66_RS06615	SM00535	Ribonuclease III family
CTI66_RS06660	SM00062	Bacterial periplasmic substrate-binding proteins
CTI66_RS06665	SM01211	CTI66_RS06665
CTI66_RS06670	SM00387	Histidine kinase-like ATPases
CTI66_RS06670	SM00388	His Kinase A (phosphoacceptor) domain
CTI66_RS06680	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS06680	SM00448	cheY-homologous receiver domain
CTI66_RS06685	SM00938	Nitrogen regulatory protein P-II
CTI66_RS06715	SM00028	Tetratricopeptide repeats
CTI66_RS06785	SM00271	DnaJ molecular chaperone homology domain
CTI66_RS06820	SM00450	Rhodanese Homology Domain
CTI66_RS06825	SM01359	CTI66_RS06825
CTI66_RS06825	SM01360	CTI66_RS06825
CTI66_RS06835	SM00562	CTI66_RS06835
CTI66_RS06850	SM00530	Helix-turn-helix XRE-family like proteins 
CTI66_RS06870	SM00564	beta-propeller repeat
CTI66_RS06895	SM00116	Domain in cystathionine beta-synthase and other proteins.
CTI66_RS06895	SM01240	CTI66_RS06895
CTI66_RS06930	SM00052	Putative diguanylate phosphodiesterase
CTI66_RS06930	SM00267	diguanylate cyclase
CTI66_RS07010	SM01130	CTI66_RS07010
CTI66_RS07080	SM00861	Transketolase, pyrimidine binding domain
CTI66_RS07090	SM00919	Malic enzyme, NAD binding domain
CTI66_RS07090	SM01274	CTI66_RS07090
CTI66_RS07095	SM00877	CTI66_RS07095
CTI66_RS07120	SM00877	CTI66_RS07120
CTI66_RS07165	SM00877	CTI66_RS07165
CTI66_RS07170	SM00877	CTI66_RS07170
CTI66_RS07175	SM00342	helix_turn_helix, arabinose operon control protein
CTI66_RS07185	SM00646	CTI66_RS07185
CTI66_RS07230	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS07245	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CTI66_RS07285	SM00771	ZipA, C-terminal domain (FtsZ-binding)
CTI66_RS07290	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CTI66_RS07290	SM00292	breast cancer carboxy-terminal domain
CTI66_RS07290	SM00532	Ligase N family
CTI66_RS07360	SM00052	Putative diguanylate phosphodiesterase
CTI66_RS07360	SM00267	diguanylate cyclase
CTI66_RS07400	SM00448	cheY-homologous receiver domain
CTI66_RS07400	SM00850	LytTr DNA-binding domain
CTI66_RS07405	SM00387	Histidine kinase-like ATPases
CTI66_RS07495	SM00463	Small MutS-related domain
CTI66_RS07535	SM00825	Beta-ketoacyl synthase
CTI66_RS07555	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CTI66_RS07600	SM00062	Bacterial periplasmic substrate-binding proteins
CTI66_RS07605	SM00062	Bacterial periplasmic substrate-binding proteins
CTI66_RS07620	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS07635	SM00905	Dihydroneopterin aldolase
CTI66_RS07690	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CTI66_RS07735	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
CTI66_RS07740	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CTI66_RS07740	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
CTI66_RS07810	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CTI66_RS07835	SM00852	Probable molybdopterin binding domain
CTI66_RS07840	SM00346	helix_turn_helix isocitrate lyase regulation
CTI66_RS07845	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CTI66_RS07915	SM00434	DNA Topoisomerase IV
CTI66_RS07920	SM00387	Histidine kinase-like ATPases
CTI66_RS07920	SM00388	His Kinase A (phosphoacceptor) domain
CTI66_RS07920	SM00448	cheY-homologous receiver domain
CTI66_RS07925	SM00421	helix_turn_helix, Lux Regulon
CTI66_RS07925	SM00448	cheY-homologous receiver domain
CTI66_RS07945	SM00342	helix_turn_helix, arabinose operon control protein
CTI66_RS07955	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS07960	SM00116	Domain in cystathionine beta-synthase and other proteins.
CTI66_RS07960	SM00924	MgtE intracellular N domain
CTI66_RS08005	SM00420	helix_turn_helix, Deoxyribose operon repressor
CTI66_RS08005	SM01134	CTI66_RS08005
CTI66_RS08030	SM00487	DEAD-like helicases superfamily
CTI66_RS08030	SM00490	helicase superfamily c-terminal domain
CTI66_RS08035	SM00363	S4 RNA-binding domain
CTI66_RS08050	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS08070	SM00052	Putative diguanylate phosphodiesterase
CTI66_RS08080	SM00014	Acid phosphatase homologues
CTI66_RS08085	SM00833	Cobalamin synthesis protein cobW C-terminal domain
CTI66_RS08100	SM00841	Elongation factor P, C-terminal
CTI66_RS08100	SM01185	CTI66_RS08100
CTI66_RS08140	SM00518	AP endonuclease family 2
CTI66_RS08195	SM00354	helix_turn _helix lactose operon repressor
CTI66_RS08205	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS08245	SM01061	CAT RNA binding domain
CTI66_RS08290	SM01217	CTI66_RS08290
CTI66_RS08305	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS08320	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CTI66_RS08325	SM00448	cheY-homologous receiver domain
CTI66_RS08325	SM00850	LytTr DNA-binding domain
CTI66_RS08390	SM01133	CTI66_RS08390
CTI66_RS08410	SM00354	helix_turn _helix lactose operon repressor
CTI66_RS08440	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CTI66_RS08460	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS08465	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS08470	SM00046	Diacylglycerol kinase catalytic domain (presumed)
CTI66_RS08480	SM00448	cheY-homologous receiver domain
CTI66_RS08480	SM00862	Transcriptional regulatory protein, C terminal
CTI66_RS08485	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CTI66_RS08485	SM00387	Histidine kinase-like ATPases
CTI66_RS08485	SM00388	His Kinase A (phosphoacceptor) domain
CTI66_RS08515	SM00421	helix_turn_helix, Lux Regulon
CTI66_RS08520	SM00448	cheY-homologous receiver domain
CTI66_RS08520	SM00862	Transcriptional regulatory protein, C terminal
CTI66_RS08525	SM00387	Histidine kinase-like ATPases
CTI66_RS08525	SM00388	His Kinase A (phosphoacceptor) domain
CTI66_RS08540	SM00478	endonuclease III
CTI66_RS08540	SM01009	AlkA N-terminal domain
CTI66_RS08560	SM01091	Transporter associated domain
CTI66_RS08570	SM00014	Acid phosphatase homologues
CTI66_RS08585	SM00226	Low molecular weight phosphatase family
CTI66_RS08650	SM01350	CTI66_RS08650
CTI66_RS08685	SM00984	UDP binding domain
CTI66_RS08720	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS08815	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CTI66_RS08820	SM00838	Elongation factor G C-terminus
CTI66_RS08820	SM00889	Elongation factor G, domain IV
CTI66_RS08825	SM00479	CTI66_RS08825
CTI66_RS08830	SM00936	Penicillin-binding protein 5, C-terminal domain 
CTI66_RS08835	SM00871	Bacterial transcription activator, effector binding domain
CTI66_RS08860	SM00996	S-adenosyl-L-homocysteine hydrolase
CTI66_RS08860	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
CTI66_RS08900	SM00052	Putative diguanylate phosphodiesterase
CTI66_RS08900	SM00267	diguanylate cyclase
CTI66_RS08935	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CTI66_RS08935	SM00267	diguanylate cyclase
CTI66_RS08985	SM00829	Enoylreductase
CTI66_RS09100	SM00530	Helix-turn-helix XRE-family like proteins 
CTI66_RS09180	SM00507	HNH nucleases
CTI66_RS09305	SM00857	Resolvase, N terminal domain
CTI66_RS09330	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CTI66_RS09355	SM00267	diguanylate cyclase
CTI66_RS09370	SM00421	helix_turn_helix, Lux Regulon
CTI66_RS09380	SM00642	Alpha-amylase domain
CTI66_RS09385	SM00062	Bacterial periplasmic substrate-binding proteins
CTI66_RS09385	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
CTI66_RS09400	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS09405	SM00421	helix_turn_helix, Lux Regulon
CTI66_RS09415	SM00421	helix_turn_helix, Lux Regulon
CTI66_RS09415	SM00448	cheY-homologous receiver domain
CTI66_RS09420	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CTI66_RS09420	SM00465	GIY-YIG type nucleases (URI domain)
CTI66_RS09445	SM01130	CTI66_RS09445
CTI66_RS09515	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS09550	SM00836	DALR anticodon binding domain
CTI66_RS09550	SM01016	Arginyl tRNA synthetase N terminal dom
CTI66_RS09610	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CTI66_RS09615	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS09625	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS09635	SM00257	Lysin motif
CTI66_RS09700	SM00479	CTI66_RS09700
CTI66_RS09765	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CTI66_RS09770	SM00945	ProQ/FINO family
CTI66_RS09775	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CTI66_RS09775	SM00245	tail specific protease
CTI66_RS09795	SM00346	helix_turn_helix isocitrate lyase regulation
CTI66_RS09830	SM00357	Cold shock protein domain
CTI66_RS09875	SM01091	Transporter associated domain
CTI66_RS09880	SM00052	Putative diguanylate phosphodiesterase
CTI66_RS09910	SM00487	DEAD-like helicases superfamily
CTI66_RS09910	SM00491	CTI66_RS09910
CTI66_RS09930	SM00341	Helicase and RNase D C-terminal
CTI66_RS09930	SM00474	3'-5' exonuclease
CTI66_RS09980	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CTI66_RS09995	SM01005	Alanine racemase, C-terminal domain
CTI66_RS10000	SM01091	Transporter associated domain
CTI66_RS10035	SM00460	Transglutaminase/protease-like homologues
CTI66_RS10105	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS10110	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS10365	SM00422	helix_turn_helix, mercury resistance
CTI66_RS10375	SM01400	CTI66_RS10375
CTI66_RS10400	SM00937	CTI66_RS10400
CTI66_RS10450	SM01012	CTI66_RS10450
CTI66_RS10465	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS10475	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CTI66_RS10485	SM00421	helix_turn_helix, Lux Regulon
CTI66_RS10485	SM00448	cheY-homologous receiver domain
CTI66_RS10490	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CTI66_RS10490	SM00387	Histidine kinase-like ATPases
CTI66_RS10500	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CTI66_RS10525	SM00344	helix_turn_helix ASNC type
CTI66_RS10575	SM00448	cheY-homologous receiver domain
CTI66_RS10585	SM00528	Domain in histone-like proteins of HNS family
CTI66_RS10625	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS10630	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS10645	SM00155	Phospholipase D. Active site motifs.
CTI66_RS10655	SM00867	YceI-like domain 
CTI66_RS10695	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CTI66_RS10725	SM00873	B3/4 domain
CTI66_RS10725	SM00874	tRNA synthetase B5 domain
CTI66_RS10725	SM00896	Ferredoxin-fold anticodon binding domain
CTI66_RS10730	SM00411	bacterial (prokaryotic) histone like domain
CTI66_RS10770	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS10865	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS10935	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS11005	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS11020	SM00346	helix_turn_helix isocitrate lyase regulation
CTI66_RS11045	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CTI66_RS11065	SM00450	Rhodanese Homology Domain
CTI66_RS11090	SM00062	Bacterial periplasmic substrate-binding proteins
CTI66_RS11105	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS11115	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS11140	SM00062	Bacterial periplasmic substrate-binding proteins
CTI66_RS11140	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
CTI66_RS11150	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS11185	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CTI66_RS11210	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS11235	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS11290	SM00346	helix_turn_helix isocitrate lyase regulation
CTI66_RS11305	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CTI66_RS11355	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CTI66_RS11355	SM00387	Histidine kinase-like ATPases
CTI66_RS11355	SM00388	His Kinase A (phosphoacceptor) domain
CTI66_RS11360	SM00448	cheY-homologous receiver domain
CTI66_RS11360	SM00862	Transcriptional regulatory protein, C terminal
CTI66_RS11395	SM00822	CTI66_RS11395
CTI66_RS11435	SM00882	Coenzyme A transferase
CTI66_RS11440	SM00882	Coenzyme A transferase
CTI66_RS11500	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS11565	SM00829	Enoylreductase
CTI66_RS11595	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS11600	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS11620	SM01059	Chloramphenicol acetyltransferase
CTI66_RS11630	SM00420	helix_turn_helix, Deoxyribose operon repressor
CTI66_RS11630	SM01134	CTI66_RS11630
CTI66_RS11640	SM00947	Carbonic anhydrase
CTI66_RS11660	SM00849	Metallo-beta-lactamase superfamily
CTI66_RS11740	SM00354	helix_turn _helix lactose operon repressor
CTI66_RS11760	SM00342	helix_turn_helix, arabinose operon control protein
CTI66_RS11775	SM00479	CTI66_RS11775
CTI66_RS11825	SM00347	helix_turn_helix multiple antibiotic resistance protein
CTI66_RS11830	SM00267	diguanylate cyclase
CTI66_RS11855	SM00363	S4 RNA-binding domain
CTI66_RS11880	SM00478	endonuclease III
CTI66_RS11880	SM00525	CTI66_RS11880
CTI66_RS11890	SM00900	CTI66_RS11890
CTI66_RS11975	SM00829	Enoylreductase
CTI66_RS11980	SM00564	beta-propeller repeat
CTI66_RS12000	SM01150	CTI66_RS12000
CTI66_RS12010	SM00829	Enoylreductase
CTI66_RS12050	SM00342	helix_turn_helix, arabinose operon control protein
CTI66_RS12060	SM00530	Helix-turn-helix XRE-family like proteins 
CTI66_RS12100	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CTI66_RS12110	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS12185	SM00530	Helix-turn-helix XRE-family like proteins 
CTI66_RS12190	SM00829	Enoylreductase
CTI66_RS12260	SM00062	Bacterial periplasmic substrate-binding proteins
CTI66_RS12275	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS12280	SM00062	Bacterial periplasmic substrate-binding proteins
CTI66_RS12295	SM00530	Helix-turn-helix XRE-family like proteins 
CTI66_RS12325	SM00342	helix_turn_helix, arabinose operon control protein
CTI66_RS12330	SM00903	Flavin reductase like domain
CTI66_RS12335	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS12370	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CTI66_RS12390	SM00346	helix_turn_helix isocitrate lyase regulation
CTI66_RS12395	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CTI66_RS12425	SM00822	CTI66_RS12425
CTI66_RS12435	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CTI66_RS12490	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS12510	SM00829	Enoylreductase
CTI66_RS12520	SM00347	helix_turn_helix multiple antibiotic resistance protein
CTI66_RS12525	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS12540	SM00919	Malic enzyme, NAD binding domain
CTI66_RS12540	SM01274	CTI66_RS12540
CTI66_RS12550	SM00849	Metallo-beta-lactamase superfamily
CTI66_RS12600	SM00642	Alpha-amylase domain
CTI66_RS12605	SM00822	CTI66_RS12605
CTI66_RS12640	SM00062	Bacterial periplasmic substrate-binding proteins
CTI66_RS12730	SM00729	Elongator protein 3, MiaB family, Radical SAM
CTI66_RS12765	SM00448	cheY-homologous receiver domain
CTI66_RS12765	SM00862	Transcriptional regulatory protein, C terminal
CTI66_RS12770	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CTI66_RS12770	SM00387	Histidine kinase-like ATPases
CTI66_RS12770	SM00388	His Kinase A (phosphoacceptor) domain
CTI66_RS12805	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS12835	SM00354	helix_turn _helix lactose operon repressor
CTI66_RS12840	SM00091	PAS domain
CTI66_RS12840	SM00267	diguanylate cyclase
CTI66_RS12870	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CTI66_RS12870	SM00895	CTI66_RS12870
CTI66_RS12890	SM00342	helix_turn_helix, arabinose operon control protein
CTI66_RS12900	SM00855	Phosphoglycerate mutase family
CTI66_RS12920	SM00342	helix_turn_helix, arabinose operon control protein
CTI66_RS12930	SM01022	CTI66_RS12930
CTI66_RS12940	SM00825	Beta-ketoacyl synthase
CTI66_RS12955	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CTI66_RS12990	SM00062	Bacterial periplasmic substrate-binding proteins
CTI66_RS13005	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS13055	SM01236	CTI66_RS13055
CTI66_RS13100	SM00354	helix_turn _helix lactose operon repressor
CTI66_RS13190	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS13195	SM00354	helix_turn _helix lactose operon repressor
CTI66_RS13225	SM00257	Lysin motif
CTI66_RS13245	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CTI66_RS13245	SM00387	Histidine kinase-like ATPases
CTI66_RS13245	SM00388	His Kinase A (phosphoacceptor) domain
CTI66_RS13250	SM00448	cheY-homologous receiver domain
CTI66_RS13290	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CTI66_RS13295	SM00342	helix_turn_helix, arabinose operon control protein
CTI66_RS13315	SM00342	helix_turn_helix, arabinose operon control protein
CTI66_RS13320	SM00420	helix_turn_helix, Deoxyribose operon repressor
CTI66_RS13320	SM01134	CTI66_RS13320
CTI66_RS13330	SM01133	CTI66_RS13330
CTI66_RS13335	SM00420	helix_turn_helix, Deoxyribose operon repressor
CTI66_RS13335	SM01134	CTI66_RS13335
CTI66_RS13365	SM00882	Coenzyme A transferase
CTI66_RS13370	SM00822	CTI66_RS13370
CTI66_RS13420	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CTI66_RS13420	SM00866	CTI66_RS13420
CTI66_RS13455	SM00052	Putative diguanylate phosphodiesterase
CTI66_RS13455	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CTI66_RS13455	SM00267	diguanylate cyclase
CTI66_RS13515	SM00530	Helix-turn-helix XRE-family like proteins 
CTI66_RS13560	SM00342	helix_turn_helix, arabinose operon control protein
CTI66_RS13590	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS13670	SM00267	diguanylate cyclase
CTI66_RS13705	SM00420	helix_turn_helix, Deoxyribose operon repressor
CTI66_RS13705	SM01134	CTI66_RS13705
CTI66_RS13725	SM01130	CTI66_RS13725
CTI66_RS13745	SM00822	CTI66_RS13745
CTI66_RS13765	SM00347	helix_turn_helix multiple antibiotic resistance protein
CTI66_RS13770	SM00342	helix_turn_helix, arabinose operon control protein
CTI66_RS13790	SM00530	Helix-turn-helix XRE-family like proteins 
CTI66_RS13795	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS13825	SM00450	Rhodanese Homology Domain
CTI66_RS13830	SM00342	helix_turn_helix, arabinose operon control protein
CTI66_RS13845	SM00354	helix_turn _helix lactose operon repressor
CTI66_RS13850	SM01038	Beta galactosidase small chain
CTI66_RS13875	SM00420	helix_turn_helix, Deoxyribose operon repressor
CTI66_RS13875	SM01134	CTI66_RS13875
CTI66_RS13890	SM01007	Class II Aldolase and Adducin N-terminal domain
CTI66_RS13905	SM00342	helix_turn_helix, arabinose operon control protein
CTI66_RS13910	SM00421	helix_turn_helix, Lux Regulon
CTI66_RS13920	SM00052	Putative diguanylate phosphodiesterase
CTI66_RS13920	SM01034	Sensors of blue-light using FAD
CTI66_RS13945	SM00421	helix_turn_helix, Lux Regulon
CTI66_RS13955	SM00342	helix_turn_helix, arabinose operon control protein
CTI66_RS13975	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CTI66_RS13975	SM00895	CTI66_RS13975
CTI66_RS14020	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CTI66_RS14140	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CTI66_RS14180	SM00387	Histidine kinase-like ATPases
CTI66_RS14185	SM00448	cheY-homologous receiver domain
CTI66_RS14195	SM00900	CTI66_RS14195
CTI66_RS14235	SM00998	Adenylosuccinate lyase C-terminus
CTI66_RS14245	SM00882	Coenzyme A transferase
CTI66_RS14250	SM00882	Coenzyme A transferase
CTI66_RS14255	SM00346	helix_turn_helix isocitrate lyase regulation
CTI66_RS14260	SM00463	Small MutS-related domain
CTI66_RS14295	SM00100	Cyclic nucleotide-monophosphate binding domain
CTI66_RS14295	SM00419	helix_turn_helix, cAMP Regulatory protein
CTI66_RS14315	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
CTI66_RS14315	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
CTI66_RS14350	SM00448	cheY-homologous receiver domain
CTI66_RS14350	SM00862	Transcriptional regulatory protein, C terminal
CTI66_RS14360	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CTI66_RS14360	SM00387	Histidine kinase-like ATPases
CTI66_RS14360	SM00388	His Kinase A (phosphoacceptor) domain
CTI66_RS14390	SM00354	helix_turn _helix lactose operon repressor
CTI66_RS14445	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CTI66_RS14495	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
CTI66_RS14510	SM00347	helix_turn_helix multiple antibiotic resistance protein
CTI66_RS14535	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS14535	SM00487	DEAD-like helicases superfamily
CTI66_RS14535	SM00490	helicase superfamily c-terminal domain
CTI66_RS14535	SM00847	Helicase associated domain (HA2)  Add an annotation
CTI66_RS14635	SM00829	Enoylreductase
CTI66_RS14675	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS14685	SM00062	Bacterial periplasmic substrate-binding proteins
CTI66_RS14690	SM01007	Class II Aldolase and Adducin N-terminal domain
CTI66_RS14705	SM00342	helix_turn_helix, arabinose operon control protein
CTI66_RS14750	SM00890	Domain of unknown function
CTI66_RS14775	SM00487	DEAD-like helicases superfamily
CTI66_RS14775	SM00490	helicase superfamily c-terminal domain
CTI66_RS14795	SM00420	helix_turn_helix, Deoxyribose operon repressor
CTI66_RS14795	SM01134	CTI66_RS14795
CTI66_RS14820	SM00344	helix_turn_helix ASNC type
CTI66_RS14840	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS14840	SM00930	CTI66_RS14840
CTI66_RS14855	SM00829	Enoylreductase
CTI66_RS14870	SM00849	Metallo-beta-lactamase superfamily
CTI66_RS14895	SM00342	helix_turn_helix, arabinose operon control protein
CTI66_RS14900	SM00822	CTI66_RS14900
CTI66_RS14910	SM00822	CTI66_RS14910
CTI66_RS15015	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS15015	SM01086	C-terminal, D2-small domain, of ClpB protein
CTI66_RS15055	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CTI66_RS15125	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CTI66_RS15140	SM00091	PAS domain
CTI66_RS15140	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS15185	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS15200	SM00342	helix_turn_helix, arabinose operon control protein
CTI66_RS15205	SM00530	Helix-turn-helix XRE-family like proteins 
CTI66_RS15230	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS15235	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS15260	SM00357	Cold shock protein domain
CTI66_RS15260	SM00955	CTI66_RS15260
CTI66_RS15270	SM00420	helix_turn_helix, Deoxyribose operon repressor
CTI66_RS15270	SM01134	CTI66_RS15270
CTI66_RS15285	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
CTI66_RS15290	SM00028	Tetratricopeptide repeats
CTI66_RS15300	SM00014	Acid phosphatase homologues
CTI66_RS15330	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
CTI66_RS15330	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
CTI66_RS15330	SM00493	CTI66_RS15330
CTI66_RS15350	SM00822	CTI66_RS15350
CTI66_RS15360	SM00363	S4 RNA-binding domain
CTI66_RS15405	SM00481	DNA polymerase alpha chain like domain
CTI66_RS15435	SM00347	helix_turn_helix multiple antibiotic resistance protein
CTI66_RS15440	SM00829	Enoylreductase
CTI66_RS15460	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
CTI66_RS15525	SM01060	CTI66_RS15525
CTI66_RS15540	SM00342	helix_turn_helix, arabinose operon control protein
CTI66_RS15570	SM00465	GIY-YIG type nucleases (URI domain)
CTI66_RS15635	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS15640	SM00450	Rhodanese Homology Domain
CTI66_RS15655	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
CTI66_RS15660	SM00829	Enoylreductase
CTI66_RS15665	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
CTI66_RS15665	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
CTI66_RS15665	SM00493	CTI66_RS15665
CTI66_RS15675	SM00014	Acid phosphatase homologues
CTI66_RS15700	SM00870	CTI66_RS15700
CTI66_RS15710	SM00636	CTI66_RS15710
CTI66_RS15715	SM00507	HNH nucleases
CTI66_RS15730	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CTI66_RS15750	SM00763	PrkA AAA domain
CTI66_RS15785	SM00822	CTI66_RS15785
CTI66_RS15825	SM00342	helix_turn_helix, arabinose operon control protein
CTI66_RS15855	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CTI66_RS15855	SM00267	diguanylate cyclase
CTI66_RS15895	SM00870	CTI66_RS15895
CTI66_RS15900	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CTI66_RS15905	SM00267	diguanylate cyclase
CTI66_RS15905	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CTI66_RS15920	SM00052	Putative diguanylate phosphodiesterase
CTI66_RS15990	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CTI66_RS16010	SM00267	diguanylate cyclase
CTI66_RS16030	SM00232	JAB/MPN domain
CTI66_RS16130	SM00507	HNH nucleases
CTI66_RS16245	SM00530	Helix-turn-helix XRE-family like proteins 
CTI66_RS16285	SM01329	CTI66_RS16285
CTI66_RS16320	SM00342	helix_turn_helix, arabinose operon control protein
CTI66_RS16325	SM00448	cheY-homologous receiver domain
CTI66_RS16325	SM00862	Transcriptional regulatory protein, C terminal
CTI66_RS16330	SM00387	Histidine kinase-like ATPases
CTI66_RS16335	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
CTI66_RS16340	SM01321	CTI66_RS16340
CTI66_RS16350	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS16380	SM00861	Transketolase, pyrimidine binding domain
CTI66_RS16445	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS16460	SM00487	DEAD-like helicases superfamily
CTI66_RS16460	SM00490	helicase superfamily c-terminal domain
CTI66_RS16460	SM00982	CTI66_RS16460
CTI66_RS16460	SM01058	CarD-like/TRCF domain
CTI66_RS16465	SM00257	Lysin motif
CTI66_RS16555	SM00825	Beta-ketoacyl synthase
CTI66_RS16565	SM00822	CTI66_RS16565
CTI66_RS16570	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CTI66_RS16600	SM00363	S4 RNA-binding domain
CTI66_RS16610	SM00316	Ribosomal protein S1-like RNA-binding domain
CTI66_RS16685	SM00450	Rhodanese Homology Domain
CTI66_RS16740	SM00506	Appr-1"-p processing enzyme
CTI66_RS16755	SM00481	DNA polymerase alpha chain like domain
CTI66_RS16885	SM00530	Helix-turn-helix XRE-family like proteins 
CTI66_RS16895	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS16900	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
CTI66_RS16930	SM00421	helix_turn_helix, Lux Regulon
CTI66_RS16965	SM00528	Domain in histone-like proteins of HNS family
CTI66_RS16975	SM00671	Sel1-like repeats.
CTI66_RS17150	SM00903	Flavin reductase like domain
CTI66_RS17220	SM01230	CTI66_RS17220
CTI66_RS17230	SM00530	Helix-turn-helix XRE-family like proteins 
CTI66_RS17250	SM01329	CTI66_RS17250
CTI66_RS17285	SM00052	Putative diguanylate phosphodiesterase
CTI66_RS17315	SM00342	helix_turn_helix, arabinose operon control protein
CTI66_RS17325	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
CTI66_RS17330	SM00992	Hemimethylated DNA-binding protein YccV like
CTI66_RS17335	SM00881	CoA binding domain
CTI66_RS17340	SM00851	MGS-like domain
CTI66_RS17420	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS17425	SM00981	CTI66_RS17425
CTI66_RS17450	SM00062	Bacterial periplasmic substrate-binding proteins
CTI66_RS17465	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS17505	SM00344	helix_turn_helix ASNC type
CTI66_RS17525	SM00849	Metallo-beta-lactamase superfamily
CTI66_RS17595	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS17600	SM00849	Metallo-beta-lactamase superfamily
CTI66_RS17605	SM00411	bacterial (prokaryotic) histone like domain
CTI66_RS17610	SM00316	Ribosomal protein S1-like RNA-binding domain
CTI66_RS17675	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CTI66_RS17685	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS17695	SM00843	CTI66_RS17695
CTI66_RS17700	SM00344	helix_turn_helix ASNC type
CTI66_RS17710	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS17715	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS17725	SM00316	Ribosomal protein S1-like RNA-binding domain
CTI66_RS17730	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS17730	SM01086	C-terminal, D2-small domain, of ClpB protein
CTI66_RS17740	SM00357	Cold shock protein domain
CTI66_RS17750	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS17810	SM00644	CTI66_RS17810
CTI66_RS17815	SM00267	diguanylate cyclase
CTI66_RS17830	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS17835	SM00062	Bacterial periplasmic substrate-binding proteins
CTI66_RS17835	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
CTI66_RS17850	SM00062	Bacterial periplasmic substrate-binding proteins
CTI66_RS17850	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
CTI66_RS17855	SM00387	Histidine kinase-like ATPases
CTI66_RS17855	SM00388	His Kinase A (phosphoacceptor) domain
CTI66_RS17860	SM00448	cheY-homologous receiver domain
CTI66_RS17860	SM00862	Transcriptional regulatory protein, C terminal
CTI66_RS17885	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS17955	SM00014	Acid phosphatase homologues
CTI66_RS17960	SM00420	helix_turn_helix, Deoxyribose operon repressor
CTI66_RS17960	SM01134	CTI66_RS17960
CTI66_RS17965	SM00936	Penicillin-binding protein 5, C-terminal domain 
CTI66_RS17990	SM00729	Elongator protein 3, MiaB family, Radical SAM
CTI66_RS18015	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS18025	SM00852	Probable molybdopterin binding domain
CTI66_RS18055	SM00354	helix_turn _helix lactose operon repressor
CTI66_RS18075	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS18090	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CTI66_RS18090	SM00866	CTI66_RS18090
CTI66_RS18105	SM00529	Helix-turn-helix diphteria tox regulatory element
CTI66_RS18135	SM00062	Bacterial periplasmic substrate-binding proteins
CTI66_RS18135	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
CTI66_RS18145	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS18160	SM00903	Flavin reductase like domain
CTI66_RS18185	SM00487	DEAD-like helicases superfamily
CTI66_RS18185	SM00488	CTI66_RS18185
CTI66_RS18185	SM00491	CTI66_RS18185
CTI66_RS18190	SM00487	DEAD-like helicases superfamily
CTI66_RS18190	SM00490	helicase superfamily c-terminal domain
CTI66_RS18195	SM00861	Transketolase, pyrimidine binding domain
CTI66_RS18205	SM00822	CTI66_RS18205
CTI66_RS18230	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS18260	SM00155	Phospholipase D. Active site motifs.
CTI66_RS18290	SM00852	Probable molybdopterin binding domain
CTI66_RS18295	SM00729	Elongator protein 3, MiaB family, Radical SAM
CTI66_RS18315	SM00448	cheY-homologous receiver domain
CTI66_RS18315	SM00862	Transcriptional regulatory protein, C terminal
CTI66_RS18320	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CTI66_RS18320	SM00387	Histidine kinase-like ATPases
CTI66_RS18320	SM00388	His Kinase A (phosphoacceptor) domain
CTI66_RS18330	SM00487	DEAD-like helicases superfamily
CTI66_RS18330	SM00490	helicase superfamily c-terminal domain
CTI66_RS18345	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS18365	SM00729	Elongator protein 3, MiaB family, Radical SAM
CTI66_RS18365	SM00876	Biotin and Thiamin Synthesis associated domain
CTI66_RS18400	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CTI66_RS18400	SM00866	CTI66_RS18400
CTI66_RS18445	SM00421	helix_turn_helix, Lux Regulon
CTI66_RS18450	SM00422	helix_turn_helix, mercury resistance
CTI66_RS18455	SM00052	Putative diguanylate phosphodiesterase
CTI66_RS18455	SM01034	Sensors of blue-light using FAD
CTI66_RS18525	SM00060	Fibronectin type 3 domain
CTI66_RS18585	SM00052	Putative diguanylate phosphodiesterase
CTI66_RS18620	SM00857	Resolvase, N terminal domain
CTI66_RS18630	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS18660	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS18685	SM00855	Phosphoglycerate mutase family
CTI66_RS18815	SM00881	CoA binding domain
CTI66_RS18830	SM00861	Transketolase, pyrimidine binding domain
CTI66_RS18870	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
CTI66_RS18870	SM01232	CTI66_RS18870
CTI66_RS18895	SM00797	Allophanate hydrolase subunit 2
CTI66_RS18900	SM00796	Allophanate hydrolase subunit 1
CTI66_RS18945	SM00387	Histidine kinase-like ATPases
CTI66_RS18945	SM00388	His Kinase A (phosphoacceptor) domain
CTI66_RS18950	SM00448	cheY-homologous receiver domain
CTI66_RS18950	SM00862	Transcriptional regulatory protein, C terminal
CTI66_RS19095	SM00729	Elongator protein 3, MiaB family, Radical SAM
CTI66_RS19110	SM00116	Domain in cystathionine beta-synthase and other proteins.
CTI66_RS19110	SM01091	Transporter associated domain
CTI66_RS19120	SM00062	Bacterial periplasmic substrate-binding proteins
CTI66_RS19135	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS19145	SM00912	haemagglutination activity domain
CTI66_RS19175	SM00855	Phosphoglycerate mutase family
CTI66_RS19210	SM00936	Penicillin-binding protein 5, C-terminal domain 
CTI66_RS19230	SM00729	Elongator protein 3, MiaB family, Radical SAM
CTI66_RS19250	SM00357	Cold shock protein domain
CTI66_RS19305	SM00470	ParB-like nuclease domain
CTI66_RS19335	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS19365	SM01007	Class II Aldolase and Adducin N-terminal domain
CTI66_RS19385	SM00354	helix_turn _helix lactose operon repressor
CTI66_RS19435	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS19445	SM00822	CTI66_RS19445
CTI66_RS19455	SM00530	Helix-turn-helix XRE-family like proteins 
CTI66_RS19475	SM00822	CTI66_RS19475
CTI66_RS19515	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS19520	SM00823	Phosphopantetheine attachment site
CTI66_RS19520	SM00824	Thioesterase
CTI66_RS19525	SM00923	MbtH-like protein
CTI66_RS19545	SM00861	Transketolase, pyrimidine binding domain
CTI66_RS19580	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS19665	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS19670	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS19680	SM00822	CTI66_RS19680
CTI66_RS19685	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS19700	SM00062	Bacterial periplasmic substrate-binding proteins
CTI66_RS19700	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
CTI66_RS19705	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CTI66_RS19710	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CTI66_RS19740	SM00831	Cation transporter/ATPase, N-terminus
CTI66_RS19755	SM00342	helix_turn_helix, arabinose operon control protein
CTI66_RS19760	SM00849	Metallo-beta-lactamase superfamily
CTI66_RS19780	SM00530	Helix-turn-helix XRE-family like proteins 
CTI66_RS19800	SM00530	Helix-turn-helix XRE-family like proteins 
CTI66_RS19815	SM00354	helix_turn _helix lactose operon repressor
CTI66_RS19825	SM00421	helix_turn_helix, Lux Regulon
CTI66_RS19920	SM00530	Helix-turn-helix XRE-family like proteins 
CTI66_RS19935	SM00829	Enoylreductase
CTI66_RS19955	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CTI66_RS19955	SM00866	CTI66_RS19955
CTI66_RS19960	SM00829	Enoylreductase
CTI66_RS20005	SM00421	helix_turn_helix, Lux Regulon
CTI66_RS20020	SM00822	CTI66_RS20020
CTI66_RS20050	SM00062	Bacterial periplasmic substrate-binding proteins
CTI66_RS20080	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS20115	SM00640	Glycosyl hydrolases family 32
CTI66_RS20120	SM00354	helix_turn _helix lactose operon repressor
CTI66_RS20135	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS20145	SM00354	helix_turn _helix lactose operon repressor
CTI66_RS20200	SM00862	Transcriptional regulatory protein, C terminal
CTI66_RS20240	SM00421	helix_turn_helix, Lux Regulon
CTI66_RS20260	SM00095	Transthyretin
CTI66_RS20295	SM00840	CTI66_RS20295
CTI66_RS20320	SM01001	AIR carboxylase
CTI66_RS20330	SM00450	Rhodanese Homology Domain
CTI66_RS20345	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS20355	SM00822	CTI66_RS20355
CTI66_RS20375	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS20380	SM00244	prohibitin homologues
CTI66_RS20390	SM00422	helix_turn_helix, mercury resistance
CTI66_RS20440	SM00387	Histidine kinase-like ATPases
CTI66_RS20445	SM00493	CTI66_RS20445
CTI66_RS20455	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS20520	SM01266	CTI66_RS20520
CTI66_RS20530	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CTI66_RS20550	SM00354	helix_turn _helix lactose operon repressor
CTI66_RS20590	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS20595	SM00052	Putative diguanylate phosphodiesterase
CTI66_RS20615	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CTI66_RS20700	SM00938	Nitrogen regulatory protein P-II
CTI66_RS20705	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS20710	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS20715	SM00344	helix_turn_helix ASNC type
CTI66_RS20745	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CTI66_RS20760	SM00411	bacterial (prokaryotic) histone like domain
CTI66_RS20765	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS20765	SM00464	Found in ATP-dependent protease La (LON)
CTI66_RS20770	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS20770	SM00994	ClpX C4-type zinc finger
CTI66_RS20770	SM01086	C-terminal, D2-small domain, of ClpB protein
CTI66_RS20840	SM00346	helix_turn_helix isocitrate lyase regulation
CTI66_RS20905	SM00981	CTI66_RS20905
CTI66_RS20920	SM00861	Transketolase, pyrimidine binding domain
CTI66_RS20990	SM01323	CTI66_RS20990
CTI66_RS21060	SM00642	Alpha-amylase domain
CTI66_RS21075	SM00091	PAS domain
CTI66_RS21075	SM00387	Histidine kinase-like ATPases
CTI66_RS21075	SM00388	His Kinase A (phosphoacceptor) domain
CTI66_RS21080	SM00448	cheY-homologous receiver domain
CTI66_RS21080	SM00862	Transcriptional regulatory protein, C terminal
CTI66_RS21145	SM00098	Alkaline phosphatase homologues
CTI66_RS21200	SM01004	Delta-aminolevulinic acid dehydratase
CTI66_RS21210	SM00563	Phosphate acyltransferases
CTI66_RS21225	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS21230	SM00062	Bacterial periplasmic substrate-binding proteins
CTI66_RS21280	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS21285	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS21295	SM00062	Bacterial periplasmic substrate-binding proteins
CTI66_RS21295	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
CTI66_RS21300	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS21340	SM00421	helix_turn_helix, Lux Regulon
CTI66_RS21345	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS21395	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
CTI66_RS21425	SM00421	helix_turn_helix, Lux Regulon
CTI66_RS21465	SM00862	Transcriptional regulatory protein, C terminal
CTI66_RS21480	SM00421	helix_turn_helix, Lux Regulon
CTI66_RS21490	SM00861	Transketolase, pyrimidine binding domain
CTI66_RS21505	SM00507	HNH nucleases
CTI66_RS21555	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CTI66_RS21555	SM00895	CTI66_RS21555
CTI66_RS21615	SM00900	CTI66_RS21615
CTI66_RS21680	SM00479	CTI66_RS21680
CTI66_RS21695	SM00849	Metallo-beta-lactamase superfamily
CTI66_RS21700	SM00257	Lysin motif
CTI66_RS21770	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS21770	SM00930	CTI66_RS21770
CTI66_RS21815	SM01322	CTI66_RS21815
CTI66_RS21830	SM00977	TilS substrate C-terminal domain
CTI66_RS21850	SM00481	DNA polymerase alpha chain like domain
CTI66_RS21880	SM00935	Outer membrane protein (OmpH-like)
CTI66_RS21890	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CTI66_RS21940	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CTI66_RS21960	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CTI66_RS21965	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CTI66_RS22010	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS22040	SM00642	Alpha-amylase domain
CTI66_RS22055	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS22110	SM00487	DEAD-like helicases superfamily
CTI66_RS22110	SM00490	helicase superfamily c-terminal domain
CTI66_RS22110	SM00847	Helicase associated domain (HA2)  Add an annotation
CTI66_RS22175	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS22180	SM00947	Carbonic anhydrase
CTI66_RS22190	SM00564	beta-propeller repeat
CTI66_RS22270	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CTI66_RS22270	SM00895	CTI66_RS22270
CTI66_RS22295	SM00644	CTI66_RS22295
CTI66_RS22320	SM01240	CTI66_RS22320
CTI66_RS22345	SM00957	SecA DEAD-like domain
CTI66_RS22345	SM00958	SecA preprotein cross-linking domain
CTI66_RS22360	SM00864	Tubulin/FtsZ family, GTPase domain
CTI66_RS22360	SM00865	Tubulin/FtsZ family, C-terminal domain
CTI66_RS22365	SM00842	Cell division protein FtsA
CTI66_RS22440	SM00354	helix_turn _helix lactose operon repressor
CTI66_RS22470	SM00917	LeuA allosteric (dimerisation) domain
CTI66_RS22475	SM01329	CTI66_RS22475
CTI66_RS22545	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS22555	SM00342	helix_turn_helix, arabinose operon control protein
CTI66_RS22570	SM01007	Class II Aldolase and Adducin N-terminal domain
CTI66_RS22575	SM00486	DNA polymerase type-B family
CTI66_RS22580	SM00487	DEAD-like helicases superfamily
CTI66_RS22580	SM00490	helicase superfamily c-terminal domain
CTI66_RS22605	SM00091	PAS domain
CTI66_RS22605	SM00387	Histidine kinase-like ATPases
CTI66_RS22610	SM00448	cheY-homologous receiver domain
CTI66_RS22615	SM00271	DnaJ molecular chaperone homology domain
CTI66_RS22635	SM00650	Ribosomal RNA adenine dimethylases
CTI66_RS22680	SM00851	MGS-like domain
CTI66_RS22680	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
CTI66_RS22685	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
CTI66_RS22740	SM00904	Riboflavin kinase
CTI66_RS22770	SM00271	DnaJ molecular chaperone homology domain
CTI66_RS22800	SM00852	Probable molybdopterin binding domain
CTI66_RS22860	SM00448	cheY-homologous receiver domain
CTI66_RS22860	SM00862	Transcriptional regulatory protein, C terminal
CTI66_RS22870	SM00387	Histidine kinase-like ATPases
CTI66_RS22870	SM00388	His Kinase A (phosphoacceptor) domain
CTI66_RS22875	SM00448	cheY-homologous receiver domain
CTI66_RS22875	SM00862	Transcriptional regulatory protein, C terminal
CTI66_RS22885	SM00342	helix_turn_helix, arabinose operon control protein
CTI66_RS22885	SM00871	Bacterial transcription activator, effector binding domain
CTI66_RS22890	SM00855	Phosphoglycerate mutase family
CTI66_RS22915	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS22920	SM00530	Helix-turn-helix XRE-family like proteins 
CTI66_RS22925	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS22960	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
CTI66_RS22965	SM01133	CTI66_RS22965
CTI66_RS22990	SM00749	bacterial OsmY and nodulation domain
CTI66_RS23040	SM00267	diguanylate cyclase
CTI66_RS23060	SM00421	helix_turn_helix, Lux Regulon
CTI66_RS23065	SM00421	helix_turn_helix, Lux Regulon
CTI66_RS23070	SM00342	helix_turn_helix, arabinose operon control protein
CTI66_RS23100	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS23150	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS23200	SM01119	CTI66_RS23200
CTI66_RS23220	SM00347	helix_turn_helix multiple antibiotic resistance protein
CTI66_RS23265	SM00342	helix_turn_helix, arabinose operon control protein
CTI66_RS23275	SM00903	Flavin reductase like domain
CTI66_RS23300	SM00833	Cobalamin synthesis protein cobW C-terminal domain
CTI66_RS23320	SM00342	helix_turn_helix, arabinose operon control protein
CTI66_RS23370	SM00347	helix_turn_helix multiple antibiotic resistance protein
CTI66_RS23380	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CTI66_RS23410	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS23430	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS23470	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
CTI66_RS23485	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CTI66_RS23485	SM00387	Histidine kinase-like ATPases
CTI66_RS23485	SM00388	His Kinase A (phosphoacceptor) domain
CTI66_RS23490	SM00448	cheY-homologous receiver domain
CTI66_RS23490	SM00862	Transcriptional regulatory protein, C terminal
CTI66_RS23530	SM00422	helix_turn_helix, mercury resistance
CTI66_RS23755	SM00528	Domain in histone-like proteins of HNS family
CTI66_RS23795	SM00255	Toll - interleukin 1 - resistance
CTI66_RS23805	SM00530	Helix-turn-helix XRE-family like proteins 
CTI66_RS23855	SM00947	Carbonic anhydrase
CTI66_RS23865	SM00829	Enoylreductase
CTI66_RS23885	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS24005	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CTI66_RS24005	SM00866	CTI66_RS24005
CTI66_RS24055	SM00831	Cation transporter/ATPase, N-terminus
CTI66_RS24065	SM00354	helix_turn _helix lactose operon repressor
CTI66_RS24075	SM00642	Alpha-amylase domain
CTI66_RS24220	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS24265	SM01091	Transporter associated domain
CTI66_RS24280	SM00342	helix_turn_helix, arabinose operon control protein
CTI66_RS24315	SM00342	helix_turn_helix, arabinose operon control protein
CTI66_RS24380	SM01007	Class II Aldolase and Adducin N-terminal domain
CTI66_RS24390	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
CTI66_RS24415	SM00420	helix_turn_helix, Deoxyribose operon repressor
CTI66_RS24415	SM01134	CTI66_RS24415
CTI66_RS24440	SM00967	RNA 2'-O ribose methyltransferase substrate binding
CTI66_RS24445	SM00316	Ribosomal protein S1-like RNA-binding domain
CTI66_RS24445	SM00357	Cold shock protein domain
CTI66_RS24445	SM00955	CTI66_RS24445
CTI66_RS24455	SM00788	Adenylosuccinate synthetase
CTI66_RS24470	SM00244	prohibitin homologues
CTI66_RS24475	SM00244	prohibitin homologues
CTI66_RS24495	SM00853	MutL C terminal dimerisation domain
CTI66_RS24495	SM01340	CTI66_RS24495
CTI66_RS24500	SM00646	CTI66_RS24500
CTI66_RS24540	SM00062	Bacterial periplasmic substrate-binding proteins
CTI66_RS24540	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
CTI66_RS24545	SM00479	CTI66_RS24545
CTI66_RS24620	SM00841	Elongation factor P, C-terminal
CTI66_RS24620	SM01185	CTI66_RS24620
CTI66_RS24630	SM00862	Transcriptional regulatory protein, C terminal
CTI66_RS24665	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS24685	SM00883	Chaperonin 10 Kd subunit
CTI66_RS24760	SM00421	helix_turn_helix, Lux Regulon
CTI66_RS24800	SM00271	DnaJ molecular chaperone homology domain
CTI66_RS24835	SM00342	helix_turn_helix, arabinose operon control protein
CTI66_RS24860	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CTI66_RS24860	SM00866	CTI66_RS24860
CTI66_RS24885	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS24890	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS24900	SM00072	Guanylate kinase homologues.
CTI66_RS24915	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CTI66_RS24915	SM00387	Histidine kinase-like ATPases
CTI66_RS24915	SM00388	His Kinase A (phosphoacceptor) domain
CTI66_RS24915	SM00448	cheY-homologous receiver domain
CTI66_RS24920	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS24950	SM00448	cheY-homologous receiver domain
CTI66_RS24950	SM00862	Transcriptional regulatory protein, C terminal
CTI66_RS24960	SM00671	Sel1-like repeats.
CTI66_RS25050	SM00422	helix_turn_helix, mercury resistance
CTI66_RS25055	SM00342	helix_turn_helix, arabinose operon control protein
CTI66_RS25060	SM00052	Putative diguanylate phosphodiesterase
CTI66_RS25090	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS25100	SM00354	helix_turn _helix lactose operon repressor
CTI66_RS25135	SM00342	helix_turn_helix, arabinose operon control protein
CTI66_RS25150	SM00062	Bacterial periplasmic substrate-binding proteins
CTI66_RS25190	SM01005	Alanine racemase, C-terminal domain
CTI66_RS25195	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS25200	SM00829	Enoylreductase
CTI66_RS25245	SM00563	Phosphate acyltransferases
CTI66_RS25270	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS25360	SM00363	S4 RNA-binding domain
CTI66_RS25375	SM01018	B12 binding domain
CTI66_RS25380	SM00346	helix_turn_helix isocitrate lyase regulation
CTI66_RS25440	SM00798	AICARFT/IMPCHase bienzyme
CTI66_RS25440	SM00851	MGS-like domain
CTI66_RS25445	SM01209	CTI66_RS25445
CTI66_RS25445	SM01210	CTI66_RS25445
CTI66_RS25450	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS25450	SM00448	cheY-homologous receiver domain
CTI66_RS25455	SM00387	Histidine kinase-like ATPases
CTI66_RS25455	SM00388	His Kinase A (phosphoacceptor) domain
CTI66_RS25470	SM00411	bacterial (prokaryotic) histone like domain
CTI66_RS25525	SM00876	Biotin and Thiamin Synthesis associated domain
CTI66_RS25535	SM00267	diguanylate cyclase
CTI66_RS25555	SM00663	RNA polymerase I subunit A N-terminus
CTI66_RS25585	SM00649	Ribosomal protein L11/L12
CTI66_RS25590	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
CTI66_RS25590	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
CTI66_RS25720	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
CTI66_RS25815	SM00341	Helicase and RNase D C-terminal
CTI66_RS25815	SM00487	DEAD-like helicases superfamily
CTI66_RS25815	SM00490	helicase superfamily c-terminal domain
CTI66_RS25815	SM00956	CTI66_RS25815
CTI66_RS25875	SM01219	CTI66_RS25875
CTI66_RS25970	SM00984	UDP binding domain
CTI66_RS25990	SM00357	Cold shock protein domain
CTI66_RS25990	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS25990	SM00959	Rho termination factor, N-terminal domain
CTI66_RS26005	SM00487	DEAD-like helicases superfamily
CTI66_RS26005	SM00490	helicase superfamily c-terminal domain
CTI66_RS26090	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS26195	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CTI66_RS26215	SM00342	helix_turn_helix, arabinose operon control protein
CTI66_RS26280	SM00487	DEAD-like helicases superfamily
CTI66_RS26280	SM00490	helicase superfamily c-terminal domain
CTI66_RS26285	SM00354	helix_turn _helix lactose operon repressor
CTI66_RS26300	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS26300	SM01086	C-terminal, D2-small domain, of ClpB protein
CTI66_RS26330	SM00448	cheY-homologous receiver domain
CTI66_RS26330	SM00862	Transcriptional regulatory protein, C terminal
CTI66_RS26335	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CTI66_RS26335	SM00387	Histidine kinase-like ATPases
CTI66_RS26335	SM00388	His Kinase A (phosphoacceptor) domain
CTI66_RS26355	SM00342	helix_turn_helix, arabinose operon control protein
CTI66_RS26360	SM00342	helix_turn_helix, arabinose operon control protein
CTI66_RS26380	SM01007	Class II Aldolase and Adducin N-terminal domain
CTI66_RS26390	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS26425	SM00354	helix_turn _helix lactose operon repressor
CTI66_RS26440	SM00354	helix_turn _helix lactose operon repressor
CTI66_RS26445	SM00530	Helix-turn-helix XRE-family like proteins 
CTI66_RS26510	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CTI66_RS26580	SM01230	CTI66_RS26580
CTI66_RS26585	SM00091	PAS domain
CTI66_RS26585	SM00387	Histidine kinase-like ATPases
CTI66_RS26585	SM00388	His Kinase A (phosphoacceptor) domain
CTI66_RS26590	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS26590	SM00448	cheY-homologous receiver domain
CTI66_RS26600	SM00729	Elongator protein 3, MiaB family, Radical SAM
CTI66_RS26620	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
CTI66_RS26620	SM00474	3'-5' exonuclease
CTI66_RS26620	SM00475	5'-3' exonuclease
CTI66_RS26620	SM00482	DNA polymerase A domain
CTI66_RS26635	SM00563	Phosphate acyltransferases
CTI66_RS26690	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CTI66_RS26690	SM00895	CTI66_RS26690
CTI66_RS26700	SM00354	helix_turn _helix lactose operon repressor
CTI66_RS26720	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS26735	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS26740	SM00327	von Willebrand factor (vWF) type A domain
CTI66_RS26750	SM00344	helix_turn_helix ASNC type
CTI66_RS26760	SM01228	CTI66_RS26760
CTI66_RS26805	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS26840	SM00382	ATPases associated with a variety of cellular activities
CTI66_RS26925	SM01234	CTI66_RS26925
