##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM2064101v1 #!genome-build-accession NCBI_Assembly:GCF_020641015.1 #!annotation-date 12/03/2022 04:20:40 #!annotation-source NCBI RefSeq ##sequence-region NZ_CP085478.1 1 5205350 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=573 NZ_CP085478.1 RefSeq region 1 5205350 . + . ID=NZ_CP085478.1:1..5205350;Dbxref=taxon:573;Is_circular=true;Name=ANONYMOUS;collected-by=Shanghai Jiao Tong University;collection-date=2015;country=China:Shanghai;gbkey=Src;genome=chromosome;isolation-source=blood;lat-lon=31.22337 N 121.49295 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Kp1604 NZ_CP085478.1 RefSeq gene 1 1404 . + . ID=gene-LI478_RS00005;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=LI478_RS00005 NZ_CP085478.1 Protein Homology CDS 1 1404 . + 0 ID=cds-WP_004151534.1;Parent=gene-LI478_RS00005;Dbxref=Genbank:WP_004151534.1;Name=WP_004151534.1;Ontology_term=GO:0006270,GO:0006275,GO:0003677,GO:0003688,GO:0005524;gbkey=CDS;gene=dnaA;go_function=DNA binding|0003677||IEA,DNA replication origin binding|0003688||IEA,ATP binding|0005524||IEA;go_process=DNA replication initiation|0006270||IEA,regulation of DNA replication|0006275||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229578.1;locus_tag=LI478_RS00005;product=chromosomal replication initiator protein DnaA;protein_id=WP_004151534.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1409 2509 . + . ID=gene-LI478_RS00010;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=LI478_RS00010 NZ_CP085478.1 Protein Homology CDS 1409 2509 . + 0 ID=cds-WP_004145090.1;Parent=gene-LI478_RS00010;Dbxref=Genbank:WP_004145090.1;Name=WP_004145090.1;Ontology_term=GO:0006260,GO:0003887,GO:0009360;gbkey=CDS;gene=dnaN;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006177590.1;locus_tag=LI478_RS00010;product=DNA polymerase III subunit beta;protein_id=WP_004145090.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2717 3790 . + . ID=gene-LI478_RS00015;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;locus_tag=LI478_RS00015 NZ_CP085478.1 Protein Homology CDS 2717 3790 . + 0 ID=cds-WP_064153629.1;Parent=gene-LI478_RS00015;Dbxref=Genbank:WP_064153629.1;Name=WP_064153629.1;Ontology_term=GO:0006281,GO:0003697,GO:0005524;gbkey=CDS;gene=recF;go_function=single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121479.1;locus_tag=LI478_RS00015;product=DNA replication/repair protein RecF;protein_id=WP_064153629.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3819 6233 . + . ID=gene-LI478_RS00020;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=LI478_RS00020 NZ_CP085478.1 Protein Homology CDS 3819 6233 . + 0 ID=cds-WP_004173845.1;Parent=gene-LI478_RS00020;Dbxref=Genbank:WP_004173845.1;Name=WP_004173845.1;Ontology_term=GO:0006265,GO:0003918,GO:0009330;gbkey=CDS;gene=gyrB;go_component=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) complex|0009330||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121480.1;locus_tag=LI478_RS00020;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;protein_id=WP_004173845.1;transl_table=11 NZ_CP085478.1 RefSeq gene 6435 7247 . + . ID=gene-LI478_RS00025;Name=yidA;gbkey=Gene;gene=yidA;gene_biotype=protein_coding;locus_tag=LI478_RS00025 NZ_CP085478.1 Protein Homology CDS 6435 7247 . + 0 ID=cds-WP_004151530.1;Parent=gene-LI478_RS00025;Dbxref=Genbank:WP_004151530.1;Name=WP_004151530.1;Ontology_term=GO:0016787;gbkey=CDS;gene=yidA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229574.1;locus_tag=LI478_RS00025;product=sugar-phosphatase;protein_id=WP_004151530.1;transl_table=11 NZ_CP085478.1 RefSeq gene 7397 8479 . + . ID=gene-LI478_RS00030;Name=LI478_RS00030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00030 NZ_CP085478.1 Protein Homology CDS 7397 8479 . + 0 ID=cds-WP_029602579.1;Parent=gene-LI478_RS00030;Dbxref=Genbank:WP_029602579.1;Name=WP_029602579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229573.1;locus_tag=LI478_RS00030;product=hypothetical protein;protein_id=WP_029602579.1;transl_table=11 NZ_CP085478.1 RefSeq gene 8476 9609 . + . ID=gene-LI478_RS00035;Name=LI478_RS00035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00035 NZ_CP085478.1 Protein Homology CDS 8476 9609 . + 0 ID=cds-WP_032432384.1;Parent=gene-LI478_RS00035;Dbxref=Genbank:WP_032432384.1;Name=WP_032432384.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229572.1;locus_tag=LI478_RS00035;product=BamA/TamA family outer membrane protein;protein_id=WP_032432384.1;transl_table=11 NZ_CP085478.1 RefSeq gene 9839 10528 . + . ID=gene-LI478_RS00040;Name=dgoR;gbkey=Gene;gene=dgoR;gene_biotype=protein_coding;locus_tag=LI478_RS00040 NZ_CP085478.1 Protein Homology CDS 9839 10528 . + 0 ID=cds-WP_064153628.1;Parent=gene-LI478_RS00040;Dbxref=Genbank:WP_064153628.1;Name=WP_064153628.1;gbkey=CDS;gene=dgoR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229571.1;locus_tag=LI478_RS00040;product=D-galactonate utilization transcriptional regulator DgoR;protein_id=WP_064153628.1;transl_table=11 NZ_CP085478.1 RefSeq gene 10525 11403 . + . ID=gene-LI478_RS00045;Name=LI478_RS00045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00045 NZ_CP085478.1 Protein Homology CDS 10525 11403 . + 0 ID=cds-WP_064153627.1;Parent=gene-LI478_RS00045;Dbxref=Genbank:WP_064153627.1;Name=WP_064153627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229570.1;locus_tag=LI478_RS00045;product=2-dehydro-3-deoxygalactonokinase;protein_id=WP_064153627.1;transl_table=11 NZ_CP085478.1 RefSeq gene 11387 12004 . + . ID=gene-LI478_RS00050;Name=LI478_RS00050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00050 NZ_CP085478.1 Protein Homology CDS 11387 12004 . + 0 ID=cds-WP_062920363.1;Parent=gene-LI478_RS00050;Dbxref=Genbank:WP_062920363.1;Name=WP_062920363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229569.1;locus_tag=LI478_RS00050;product=2-dehydro-3-deoxy-6-phosphogalactonate aldolase;protein_id=WP_062920363.1;transl_table=11 NZ_CP085478.1 RefSeq gene 12001 13149 . + . ID=gene-LI478_RS00055;Name=dgoD;gbkey=Gene;gene=dgoD;gene_biotype=protein_coding;locus_tag=LI478_RS00055 NZ_CP085478.1 Protein Homology CDS 12001 13149 . + 0 ID=cds-WP_004150286.1;Parent=gene-LI478_RS00055;Dbxref=Genbank:WP_004150286.1;Name=WP_004150286.1;Ontology_term=GO:0009063,GO:0008869;gbkey=CDS;gene=dgoD;go_function=galactonate dehydratase activity|0008869||IEA;go_process=amino acid catabolic process|0009063||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020077623.1;locus_tag=LI478_RS00055;product=galactonate dehydratase;protein_id=WP_004150286.1;transl_table=11 NZ_CP085478.1 RefSeq gene 13327 14664 . + . ID=gene-LI478_RS00060;Name=LI478_RS00060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00060 NZ_CP085478.1 Protein Homology CDS 13327 14664 . + 0 ID=cds-WP_004150285.1;Parent=gene-LI478_RS00060;Dbxref=Genbank:WP_004150285.1;Name=WP_004150285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462727.1;locus_tag=LI478_RS00060;product=MFS transporter;protein_id=WP_004150285.1;transl_table=11 NZ_CP085478.1 RefSeq gene 14716 15942 . + . ID=gene-LI478_RS00065;Name=LI478_RS00065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00065 NZ_CP085478.1 Protein Homology CDS 14716 15942 . + 0 ID=cds-WP_004150284.1;Parent=gene-LI478_RS00065;Dbxref=Genbank:WP_004150284.1;Name=WP_004150284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229566.1;locus_tag=LI478_RS00065;product=DUF3748 domain-containing protein;protein_id=WP_004150284.1;transl_table=11 NZ_CP085478.1 RefSeq gene 15944 16276 . - . ID=gene-LI478_RS00070;Name=LI478_RS00070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00070 NZ_CP085478.1 Protein Homology CDS 15944 16276 . - 0 ID=cds-WP_064153626.1;Parent=gene-LI478_RS00070;Dbxref=Genbank:WP_064153626.1;Name=WP_064153626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229565.1;locus_tag=LI478_RS00070;product=YceK/YidQ family lipoprotein;protein_id=WP_064153626.1;transl_table=11 NZ_CP085478.1 cmsearch sequence_feature 16522 16597 . + . ID=id-NZ_CP085478.1:16522..16597;Dbxref=RFAM:RF01832;Note=ROSE (Repression Of Heat Shock gene Expression) occurs in the 5'-region of heat shock genes and acts as an RNA thermometer to modulate expression.;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1 NZ_CP085478.1 RefSeq gene 16591 17004 . + . ID=gene-LI478_RS00075;Name=ibpA;gbkey=Gene;gene=ibpA;gene_biotype=protein_coding;locus_tag=LI478_RS00075 NZ_CP085478.1 Protein Homology CDS 16591 17004 . + 0 ID=cds-WP_004151523.1;Parent=gene-LI478_RS00075;Dbxref=Genbank:WP_004151523.1;Name=WP_004151523.1;gbkey=CDS;gene=ibpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006687722.1;locus_tag=LI478_RS00075;product=heat shock chaperone IbpA;protein_id=WP_004151523.1;transl_table=11 NZ_CP085478.1 RefSeq gene 17121 17549 . + . ID=gene-LI478_RS00080;Name=ibpB;gbkey=Gene;gene=ibpB;gene_biotype=protein_coding;locus_tag=LI478_RS00080 NZ_CP085478.1 Protein Homology CDS 17121 17549 . + 0 ID=cds-WP_004145074.1;Parent=gene-LI478_RS00080;Dbxref=Genbank:WP_004145074.1;Name=WP_004145074.1;gbkey=CDS;gene=ibpB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229563.1;locus_tag=LI478_RS00080;product=heat shock chaperone IbpB;protein_id=WP_004145074.1;transl_table=11 NZ_CP085478.1 RefSeq gene 17686 18510 . + . ID=gene-LI478_RS00085;Name=dinD;gbkey=Gene;gene=dinD;gene_biotype=protein_coding;locus_tag=LI478_RS00085 NZ_CP085478.1 Protein Homology CDS 17686 18510 . + 0 ID=cds-WP_004151522.1;Parent=gene-LI478_RS00085;Dbxref=Genbank:WP_004151522.1;Name=WP_004151522.1;gbkey=CDS;gene=dinD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229562.1;locus_tag=LI478_RS00085;product=DNA damage-inducible protein D;protein_id=WP_004151522.1;transl_table=11 NZ_CP085478.1 RefSeq gene 18612 20273 . + . ID=gene-LI478_RS00090;Name=LI478_RS00090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00090 NZ_CP085478.1 Protein Homology CDS 18612 20273 . + 0 ID=cds-WP_031590438.1;Parent=gene-LI478_RS00090;Dbxref=Genbank:WP_031590438.1;Name=WP_031590438.1;Ontology_term=GO:0006813,GO:0008324;gbkey=CDS;go_function=cation transmembrane transporter activity|0008324||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229561.1;locus_tag=LI478_RS00090;product=putative transporter;protein_id=WP_031590438.1;transl_table=11 NZ_CP085478.1 RefSeq gene 20241 20987 . - . ID=gene-LI478_RS00095;Name=LI478_RS00095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00095 NZ_CP085478.1 Protein Homology CDS 20241 20987 . - 0 ID=cds-WP_004173853.1;Parent=gene-LI478_RS00095;Dbxref=Genbank:WP_004173853.1;Name=WP_004173853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008806752.1;locus_tag=LI478_RS00095;product=GntR family transcriptional regulator;protein_id=WP_004173853.1;transl_table=11 NZ_CP085478.1 RefSeq gene 21286 22908 . + . ID=gene-LI478_RS00100;Name=LI478_RS00100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00100 NZ_CP085478.1 Protein Homology CDS 21286 22908 . + 0 ID=cds-WP_002923307.1;Parent=gene-LI478_RS00100;Dbxref=Genbank:WP_002923307.1;Name=WP_002923307.1;Ontology_term=GO:0015144;gbkey=CDS;go_function=carbohydrate transmembrane transporter activity|0015144||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229559.1;locus_tag=LI478_RS00100;product=alpha-glucoside-specific PTS transporter subunit IIBC;protein_id=WP_002923307.1;transl_table=11 NZ_CP085478.1 RefSeq gene 22905 24227 . + . ID=gene-LI478_RS00105;Name=LI478_RS00105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00105 NZ_CP085478.1 Protein Homology CDS 22905 24227 . + 0 ID=cds-WP_002923306.1;Parent=gene-LI478_RS00105;Dbxref=Genbank:WP_002923306.1;Name=WP_002923306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229558.1;locus_tag=LI478_RS00105;product=6-phospho-alpha-glucosidase;protein_id=WP_002923306.1;transl_table=11 NZ_CP085478.1 RefSeq gene 24329 24676 . + . ID=gene-LI478_RS00110;Name=LI478_RS00110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00110 NZ_CP085478.1 Protein Homology CDS 24329 24676 . + 0 ID=cds-WP_002923305.1;Parent=gene-LI478_RS00110;Dbxref=Genbank:WP_002923305.1;Name=WP_002923305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229557.1;locus_tag=LI478_RS00110;product=DUF202 domain-containing protein;protein_id=WP_002923305.1;transl_table=11 NZ_CP085478.1 RefSeq gene 24666 25028 . + . ID=gene-LI478_RS00115;Name=LI478_RS00115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00115 NZ_CP085478.1 Protein Homology CDS 24666 25028 . + 0 ID=cds-WP_002923304.1;Parent=gene-LI478_RS00115;Dbxref=Genbank:WP_002923304.1;Name=WP_002923304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229556.1;locus_tag=LI478_RS00115;product=DUF202 domain-containing protein;protein_id=WP_002923304.1;transl_table=11 NZ_CP085478.1 RefSeq gene 25103 25525 . + . ID=gene-LI478_RS00120;Name=LI478_RS00120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00120 NZ_CP085478.1 Protein Homology CDS 25103 25525 . + 0 ID=cds-WP_002923302.1;Parent=gene-LI478_RS00120;Dbxref=Genbank:WP_002923302.1;Name=WP_002923302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229555.1;locus_tag=LI478_RS00120;product=hypothetical protein;protein_id=WP_002923302.1;transl_table=11 NZ_CP085478.1 RefSeq gene 25529 26857 . - . ID=gene-LI478_RS00125;Name=dsdA;gbkey=Gene;gene=dsdA;gene_biotype=protein_coding;locus_tag=LI478_RS00125 NZ_CP085478.1 Protein Homology CDS 25529 26857 . - 0 ID=cds-WP_048332083.1;Parent=gene-LI478_RS00125;Dbxref=Genbank:WP_048332083.1;Name=WP_048332083.1;Ontology_term=GO:0046416,GO:0008721,GO:0005737;gbkey=CDS;gene=dsdA;go_component=cytoplasm|0005737||IEA;go_function=D-serine ammonia-lyase activity|0008721||IEA;go_process=D-amino acid metabolic process|0046416||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229554.1;locus_tag=LI478_RS00125;product=D-serine ammonia-lyase;protein_id=WP_048332083.1;transl_table=11 NZ_CP085478.1 RefSeq gene 26874 28211 . - . ID=gene-LI478_RS00130;Name=dsdX;gbkey=Gene;gene=dsdX;gene_biotype=protein_coding;locus_tag=LI478_RS00130 NZ_CP085478.1 Protein Homology CDS 26874 28211 . - 0 ID=cds-WP_004173855.1;Parent=gene-LI478_RS00130;Dbxref=Genbank:WP_004173855.1;Name=WP_004173855.1;Ontology_term=GO:0035429,GO:0015128,GO:0016020;gbkey=CDS;gene=dsdX;go_component=membrane|0016020||IEA;go_function=gluconate transmembrane transporter activity|0015128||IEA;go_process=gluconate transmembrane transport|0035429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229553.1;locus_tag=LI478_RS00130;product=D-serine transporter DsdX;protein_id=WP_004173855.1;transl_table=11 NZ_CP085478.1 RefSeq gene 28303 28449 . + . ID=gene-LI478_RS00135;Name=LI478_RS00135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00135 NZ_CP085478.1 Protein Homology CDS 28303 28449 . + 0 ID=cds-WP_032410116.1;Parent=gene-LI478_RS00135;Dbxref=Genbank:WP_032410116.1;Name=WP_032410116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020802513.1;locus_tag=LI478_RS00135;product=hypothetical protein;protein_id=WP_032410116.1;transl_table=11 NZ_CP085478.1 RefSeq gene 28437 29360 . + . ID=gene-LI478_RS00140;Name=dsdC;gbkey=Gene;gene=dsdC;gene_biotype=protein_coding;locus_tag=LI478_RS00140 NZ_CP085478.1 Protein Homology CDS 28437 29360 . + 0 ID=cds-WP_004150274.1;Parent=gene-LI478_RS00140;Dbxref=Genbank:WP_004150274.1;Name=WP_004150274.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=dsdC;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229551.1;locus_tag=LI478_RS00140;product=DNA-binding transcriptional regulator DsdC;protein_id=WP_004150274.1;transl_table=11 NZ_CP085478.1 RefSeq gene 29520 30704 . - . ID=gene-LI478_RS00145;Name=emrD;gbkey=Gene;gene=emrD;gene_biotype=protein_coding;locus_tag=LI478_RS00145 NZ_CP085478.1 Protein Homology CDS 29520 30704 . - 0 ID=cds-WP_004181587.1;Parent=gene-LI478_RS00145;Dbxref=Genbank:WP_004181587.1;Name=WP_004181587.1;gbkey=CDS;gene=emrD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229550.1;locus_tag=LI478_RS00145;product=multidrug efflux MFS transporter EmrD;protein_id=WP_004181587.1;transl_table=11 NZ_CP085478.1 RefSeq gene 30880 31713 . - . ID=gene-LI478_RS00150;Name=LI478_RS00150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00150 NZ_CP085478.1 Protein Homology CDS 30880 31713 . - 0 ID=cds-WP_002923296.1;Parent=gene-LI478_RS00150;Dbxref=Genbank:WP_002923296.1;Name=WP_002923296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229549.1;locus_tag=LI478_RS00150;product=DMT family transporter;protein_id=WP_002923296.1;transl_table=11 NZ_CP085478.1 RefSeq gene 31782 32228 . - . ID=gene-LI478_RS00155;Name=LI478_RS00155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00155 NZ_CP085478.1 Protein Homology CDS 31782 32228 . - 0 ID=cds-WP_002923294.1;Parent=gene-LI478_RS00155;Dbxref=Genbank:WP_002923294.1;Name=WP_002923294.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229548.1;locus_tag=LI478_RS00155;product=GNAT family N-acetyltransferase;protein_id=WP_002923294.1;transl_table=11 NZ_CP085478.1 RefSeq gene 32319 32438 . - . ID=gene-LI478_RS00160;Name=tisB;gbkey=Gene;gene=tisB;gene_biotype=protein_coding;locus_tag=LI478_RS00160 NZ_CP085478.1 Protein Homology CDS 32319 32438 . - 0 ID=cds-WP_004145059.1;Parent=gene-LI478_RS00160;Dbxref=Genbank:WP_004145059.1;Name=WP_004145059.1;Ontology_term=GO:0022611,GO:0015075;gbkey=CDS;gene=tisB;go_function=ion transmembrane transporter activity|0015075||IEA;go_process=dormancy process|0022611||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229547.1;locus_tag=LI478_RS00160;product=type I toxin-antitoxin system toxin TisB;protein_id=WP_004145059.1;transl_table=11 NZ_CP085478.1 RefSeq gene 32891 33058 . - . ID=gene-LI478_RS00165;Name=LI478_RS00165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00165 NZ_CP085478.1 Protein Homology CDS 32891 33058 . - 0 ID=cds-WP_014343455.1;Parent=gene-LI478_RS00165;Dbxref=Genbank:WP_014343455.1;Name=WP_014343455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229546.1;locus_tag=LI478_RS00165;product=hypothetical protein;protein_id=WP_014343455.1;transl_table=11 NZ_CP085478.1 RefSeq gene 33071 33166 . + . ID=gene-LI478_RS00170;Name=ivbL;gbkey=Gene;gene=ivbL;gene_biotype=protein_coding;locus_tag=LI478_RS00170 NZ_CP085478.1 Protein Homology CDS 33071 33166 . + 0 ID=cds-WP_002923286.1;Parent=gene-LI478_RS00170;Dbxref=Genbank:WP_002923286.1;Name=WP_002923286.1;gbkey=CDS;gene=ivbL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002923286.1;locus_tag=LI478_RS00170;product=ilvB operon leader peptide IvbL;protein_id=WP_002923286.1;transl_table=11 NZ_CP085478.1 RefSeq gene 33271 34959 . + . ID=gene-LI478_RS00175;Name=ilvB;gbkey=Gene;gene=ilvB;gene_biotype=protein_coding;locus_tag=LI478_RS00175 NZ_CP085478.1 Protein Homology CDS 33271 34959 . + 0 ID=cds-WP_048977625.1;Parent=gene-LI478_RS00175;Dbxref=Genbank:WP_048977625.1;Name=WP_048977625.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvB;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462695.1;locus_tag=LI478_RS00175;product=acetolactate synthase large subunit;protein_id=WP_048977625.1;transl_table=11 NZ_CP085478.1 RefSeq gene 34963 35250 . + . ID=gene-LI478_RS00180;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=LI478_RS00180 NZ_CP085478.1 Protein Homology CDS 34963 35250 . + 0 ID=cds-WP_002923283.1;Parent=gene-LI478_RS00180;Dbxref=Genbank:WP_002923283.1;Name=WP_002923283.1;gbkey=CDS;gene=ilvN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229544.1;locus_tag=LI478_RS00180;product=acetolactate synthase small subunit;protein_id=WP_002923283.1;transl_table=11 NZ_CP085478.1 RefSeq gene 35401 35994 . + . ID=gene-LI478_RS00185;Name=uhpA;gbkey=Gene;gene=uhpA;gene_biotype=protein_coding;locus_tag=LI478_RS00185 NZ_CP085478.1 Protein Homology CDS 35401 35994 . + 0 ID=cds-WP_002923282.1;Parent=gene-LI478_RS00185;Dbxref=Genbank:WP_002923282.1;Name=WP_002923282.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=uhpA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229543.1;locus_tag=LI478_RS00185;product=transcriptional regulator UhpA;protein_id=WP_002923282.1;transl_table=11 NZ_CP085478.1 RefSeq gene 36012 37493 . + . ID=gene-LI478_RS00190;Name=uhpB;gbkey=Gene;gene=uhpB;gene_biotype=protein_coding;locus_tag=LI478_RS00190 NZ_CP085478.1 Protein Homology CDS 36012 37493 . + 0 ID=cds-WP_004151519.1;Parent=gene-LI478_RS00190;Dbxref=Genbank:WP_004151519.1;Name=WP_004151519.1;Ontology_term=GO:0000160,GO:0000155;gbkey=CDS;gene=uhpB;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229542.1;locus_tag=LI478_RS00190;product=signal transduction histidine-protein kinase/phosphatase UhpB;protein_id=WP_004151519.1;transl_table=11 NZ_CP085478.1 RefSeq gene 37505 38833 . + . ID=gene-LI478_RS00195;Name=LI478_RS00195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00195 NZ_CP085478.1 Protein Homology CDS 37505 38833 . + 0 ID=cds-WP_004145056.1;Parent=gene-LI478_RS00195;Dbxref=Genbank:WP_004145056.1;Name=WP_004145056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229541.1;locus_tag=LI478_RS00195;product=MFS transporter;protein_id=WP_004145056.1;transl_table=11 NZ_CP085478.1 RefSeq gene 38979 40370 . + . ID=gene-LI478_RS00200;Name=uhpT;gbkey=Gene;gene=uhpT;gene_biotype=protein_coding;locus_tag=LI478_RS00200 NZ_CP085478.1 Protein Homology CDS 38979 40370 . + 0 ID=cds-WP_002923280.1;Parent=gene-LI478_RS00200;Dbxref=Genbank:WP_002923280.1;Name=WP_002923280.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=uhpT;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229540.1;locus_tag=LI478_RS00200;product=hexose-6-phosphate:phosphate antiporter;protein_id=WP_002923280.1;transl_table=11 NZ_CP085478.1 RefSeq gene 40507 40959 . + . ID=gene-LI478_RS00205;Name=LI478_RS00205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00205 NZ_CP085478.1 Protein Homology CDS 40507 40959 . + 0 ID=cds-WP_004181583.1;Parent=gene-LI478_RS00205;Dbxref=Genbank:WP_004181583.1;Name=WP_004181583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229539.1;locus_tag=LI478_RS00205;product=DUF1198 domain-containing protein;protein_id=WP_004181583.1;transl_table=11 NZ_CP085478.1 RefSeq gene 41088 41411 . - . ID=gene-LI478_RS00210;Name=LI478_RS00210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00210 NZ_CP085478.1 Protein Homology CDS 41088 41411 . - 0 ID=cds-WP_004173862.1;Parent=gene-LI478_RS00210;Dbxref=Genbank:WP_004173862.1;Name=WP_004173862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462677.1;locus_tag=LI478_RS00210;product=DNA-binding transcriptional regulator;protein_id=WP_004173862.1;transl_table=11 NZ_CP085478.1 RefSeq pseudogene 41395 41756 . - . ID=gene-LI478_RS00215;Name=LI478_RS00215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS00215;pseudo=true NZ_CP085478.1 Protein Homology CDS 41395 41756 . - 0 ID=cds-LI478_RS00215;Parent=gene-LI478_RS00215;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229537.1;locus_tag=LI478_RS00215;product=type II toxin-antitoxin system RelE/ParE family toxin;pseudo=true;transl_table=11 NZ_CP085478.1 RefSeq gene 41968 43161 . + . ID=gene-LI478_RS00220;Name=nepI;gbkey=Gene;gene=nepI;gene_biotype=protein_coding;locus_tag=LI478_RS00220 NZ_CP085478.1 Protein Homology CDS 41968 43161 . + 0 ID=cds-WP_004186250.1;Parent=gene-LI478_RS00220;Dbxref=Genbank:WP_004186250.1;Name=WP_004186250.1;Ontology_term=GO:0015860,GO:0015211,GO:0016020;gbkey=CDS;gene=nepI;go_component=membrane|0016020||IEA;go_function=purine nucleoside transmembrane transporter activity|0015211||IEA;go_process=purine nucleoside transmembrane transport|0015860||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229536.1;locus_tag=LI478_RS00220;product=purine ribonucleoside efflux pump NepI;protein_id=WP_004186250.1;transl_table=11 NZ_CP085478.1 RefSeq gene 43158 43967 . - . ID=gene-LI478_RS00225;Name=LI478_RS00225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00225 NZ_CP085478.1 Protein Homology CDS 43158 43967 . - 0 ID=cds-WP_016532492.1;Parent=gene-LI478_RS00225;Dbxref=Genbank:WP_016532492.1;Name=WP_016532492.1;Ontology_term=GO:0019700,GO:0050194;gbkey=CDS;go_function=phosphonoacetaldehyde hydrolase activity|0050194||IEA;go_process=organic phosphonate catabolic process|0019700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229535.1;locus_tag=LI478_RS00225;product=phosphonoacetaldehyde hydrolase;protein_id=WP_016532492.1;transl_table=11 NZ_CP085478.1 RefSeq gene 43977 45080 . - . ID=gene-LI478_RS00230;Name=phnW;gbkey=Gene;gene=phnW;gene_biotype=protein_coding;locus_tag=LI478_RS00230 NZ_CP085478.1 Protein Homology CDS 43977 45080 . - 0 ID=cds-WP_004181579.1;Parent=gene-LI478_RS00230;Dbxref=Genbank:WP_004181579.1;Name=WP_004181579.1;Ontology_term=GO:0019700,GO:0047304;gbkey=CDS;gene=phnW;go_function=2-aminoethylphosphonate-pyruvate transaminase activity|0047304||IEA;go_process=organic phosphonate catabolic process|0019700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229534.1;locus_tag=LI478_RS00230;product=2-aminoethylphosphonate--pyruvate transaminase;protein_id=WP_004181579.1;transl_table=11 NZ_CP085478.1 RefSeq gene 45222 45941 . + . ID=gene-LI478_RS00235;Name=phnR;gbkey=Gene;gene=phnR;gene_biotype=protein_coding;locus_tag=LI478_RS00235 NZ_CP085478.1 Protein Homology CDS 45222 45941 . + 0 ID=cds-WP_004145049.1;Parent=gene-LI478_RS00235;Dbxref=Genbank:WP_004145049.1;Name=WP_004145049.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=phnR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229533.1;locus_tag=LI478_RS00235;product=phosphonate utilization transcriptional regulator PhnR;protein_id=WP_004145049.1;transl_table=11 NZ_CP085478.1 RefSeq gene 46118 47131 . + . ID=gene-LI478_RS00240;Name=phnS;gbkey=Gene;gene=phnS;gene_biotype=protein_coding;locus_tag=LI478_RS00240 NZ_CP085478.1 Protein Homology CDS 46118 47131 . + 0 ID=cds-WP_032415830.1;Parent=gene-LI478_RS00240;Dbxref=Genbank:WP_032415830.1;Name=WP_032415830.1;Ontology_term=GO:0033223,GO:0033225,GO:0033226,GO:0009897,GO:0030288,GO:0055052;gbkey=CDS;gene=phnS;go_component=external side of plasma membrane|0009897||IEA,outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA,2-aminoethylphosphonate binding|0033226||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229532.1;locus_tag=LI478_RS00240;product=2-aminoethylphosphonate ABC transporter substrate-binding protein;protein_id=WP_032415830.1;transl_table=11 NZ_CP085478.1 RefSeq gene 47137 48249 . + . ID=gene-LI478_RS00245;Name=phnT;gbkey=Gene;gene=phnT;gene_biotype=protein_coding;locus_tag=LI478_RS00245 NZ_CP085478.1 Protein Homology CDS 47137 48249 . + 0 ID=cds-WP_004150258.1;Parent=gene-LI478_RS00245;Dbxref=Genbank:WP_004150258.1;Name=WP_004150258.1;Ontology_term=GO:0033223,GO:0005524,GO:0033225,GO:0009898,GO:0055052;gbkey=CDS;gene=phnT;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229531.1;locus_tag=LI478_RS00245;product=2-aminoethylphosphonate ABC transport system ATP-binding subunit PhnT;protein_id=WP_004150258.1;transl_table=11 NZ_CP085478.1 RefSeq gene 48249 49109 . + . ID=gene-LI478_RS00250;Name=phnU;gbkey=Gene;gene=phnU;gene_biotype=protein_coding;locus_tag=LI478_RS00250 NZ_CP085478.1 Protein Homology CDS 48249 49109 . + 0 ID=cds-WP_032415829.1;Parent=gene-LI478_RS00250;Dbxref=Genbank:WP_032415829.1;Name=WP_032415829.1;Ontology_term=GO:0033223,GO:0033225,GO:0005886,GO:0055052;gbkey=CDS;gene=phnU;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229530.1;locus_tag=LI478_RS00250;product=2-aminoethylphosphonate ABC transporter permease subunit;protein_id=WP_032415829.1;transl_table=11 NZ_CP085478.1 RefSeq gene 49112 49909 . + . ID=gene-LI478_RS00255;Name=phnV;gbkey=Gene;gene=phnV;gene_biotype=protein_coding;locus_tag=LI478_RS00255 NZ_CP085478.1 Protein Homology CDS 49112 49909 . + 0 ID=cds-WP_004145044.1;Parent=gene-LI478_RS00255;Dbxref=Genbank:WP_004145044.1;Name=WP_004145044.1;Ontology_term=GO:0033223,GO:0033225,GO:0005886,GO:0055052;gbkey=CDS;gene=phnV;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459421.1;locus_tag=LI478_RS00255;product=2-aminoethylphosphonate ABC transport system%2C membrane component PhnV;protein_id=WP_004145044.1;transl_table=11 NZ_CP085478.1 RefSeq gene 50109 51488 . - . ID=gene-LI478_RS00260;Name=LI478_RS00260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00260 NZ_CP085478.1 Protein Homology CDS 50109 51488 . - 0 ID=cds-WP_064153041.1;Parent=gene-LI478_RS00260;Dbxref=Genbank:WP_064153041.1;Name=WP_064153041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229527.1;locus_tag=LI478_RS00260;product=carbohydrate porin;protein_id=WP_064153041.1;transl_table=11 NZ_CP085478.1 RefSeq gene 51633 51935 . - . ID=gene-LI478_RS00265;Name=LI478_RS00265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00265 NZ_CP085478.1 Protein Homology CDS 51633 51935 . - 0 ID=cds-WP_002923158.1;Parent=gene-LI478_RS00265;Dbxref=Genbank:WP_002923158.1;Name=WP_002923158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229526.1;locus_tag=LI478_RS00265;product=PTS lactose/cellobiose transporter subunit IIA;protein_id=WP_002923158.1;transl_table=11 NZ_CP085478.1 RefSeq gene 52033 53355 . - . ID=gene-LI478_RS00270;Name=LI478_RS00270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00270 NZ_CP085478.1 Protein Homology CDS 52033 53355 . - 0 ID=cds-WP_002923156.1;Parent=gene-LI478_RS00270;Dbxref=Genbank:WP_002923156.1;Name=WP_002923156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229525.1;locus_tag=LI478_RS00270;product=PTS cellobiose transporter subunit IIC;protein_id=WP_002923156.1;transl_table=11 NZ_CP085478.1 RefSeq gene 53367 53681 . - . ID=gene-LI478_RS00275;Name=LI478_RS00275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00275 NZ_CP085478.1 Protein Homology CDS 53367 53681 . - 0 ID=cds-WP_004145041.1;Parent=gene-LI478_RS00275;Dbxref=Genbank:WP_004145041.1;Name=WP_004145041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229524.1;locus_tag=LI478_RS00275;product=PTS sugar transporter subunit IIB;protein_id=WP_004145041.1;transl_table=11 NZ_CP085478.1 RefSeq gene 53975 54916 . + . ID=gene-LI478_RS00280;Name=LI478_RS00280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00280 NZ_CP085478.1 Protein Homology CDS 53975 54916 . + 0 ID=cds-WP_020324162.1;Parent=gene-LI478_RS00280;Dbxref=Genbank:WP_020324162.1;Name=WP_020324162.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229523.1;locus_tag=LI478_RS00280;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_020324162.1;transl_table=11 NZ_CP085478.1 RefSeq gene 55128 56498 . + . ID=gene-LI478_RS00285;Name=LI478_RS00285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00285 NZ_CP085478.1 Protein Homology CDS 55128 56498 . + 0 ID=cds-WP_004173870.1;Parent=gene-LI478_RS00285;Dbxref=Genbank:WP_004173870.1;Name=WP_004173870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229522.1;locus_tag=LI478_RS00285;product=aromatic acid/H+ symport family MFS transporter;protein_id=WP_004173870.1;transl_table=11 NZ_CP085478.1 RefSeq gene 56512 57774 . + . ID=gene-LI478_RS00290;Name=LI478_RS00290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00290 NZ_CP085478.1 Protein Homology CDS 56512 57774 . + 0 ID=cds-WP_002923152.1;Parent=gene-LI478_RS00290;Dbxref=Genbank:WP_002923152.1;Name=WP_002923152.1;Ontology_term=GO:0006725,GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;go_process=cellular aromatic compound metabolic process|0006725||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229521.1;locus_tag=LI478_RS00290;product=gallate dioxygenase;protein_id=WP_002923152.1;transl_table=11 NZ_CP085478.1 RefSeq gene 57771 58997 . - . ID=gene-LI478_RS00295;Name=LI478_RS00295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00295 NZ_CP085478.1 Protein Homology CDS 57771 58997 . - 0 ID=cds-WP_002923147.1;Parent=gene-LI478_RS00295;Dbxref=Genbank:WP_002923147.1;Name=WP_002923147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229520.1;locus_tag=LI478_RS00295;product=LysR family transcriptional regulator;protein_id=WP_002923147.1;transl_table=11 NZ_CP085478.1 RefSeq gene 59125 59865 . + . ID=gene-LI478_RS00300;Name=galB;gbkey=Gene;gene=galB;gene_biotype=protein_coding;locus_tag=LI478_RS00300 NZ_CP085478.1 Protein Homology CDS 59125 59865 . + 0 ID=cds-WP_004211137.1;Parent=gene-LI478_RS00300;Dbxref=Genbank:WP_004211137.1;Name=WP_004211137.1;gbkey=CDS;gene=galB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229519.1;locus_tag=LI478_RS00300;product=4-oxalmesaconate hydratase;protein_id=WP_004211137.1;transl_table=11 NZ_CP085478.1 RefSeq gene 59862 60575 . + . ID=gene-LI478_RS00305;Name=LI478_RS00305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00305 NZ_CP085478.1 Protein Homology CDS 59862 60575 . + 0 ID=cds-WP_020801778.1;Parent=gene-LI478_RS00305;Dbxref=Genbank:WP_020801778.1;Name=WP_020801778.1;Ontology_term=GO:0047443;gbkey=CDS;go_function=4-hydroxy-4-methyl-2-oxoglutarate aldolase activity|0047443||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229518.1;locus_tag=LI478_RS00305;product=4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase;protein_id=WP_020801778.1;transl_table=11 NZ_CP085478.1 RefSeq gene 60576 61661 . + . ID=gene-LI478_RS00310;Name=LI478_RS00310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00310 NZ_CP085478.1 Protein Homology CDS 60576 61661 . + 0 ID=cds-WP_004173873.1;Parent=gene-LI478_RS00310;Dbxref=Genbank:WP_004173873.1;Name=WP_004173873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016162004.1;locus_tag=LI478_RS00310;product=4-oxalomesaconate tautomerase;protein_id=WP_004173873.1;transl_table=11 NZ_CP085478.1 RefSeq gene 61664 62527 . + . ID=gene-LI478_RS00315;Name=LI478_RS00315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00315 NZ_CP085478.1 Protein Homology CDS 61664 62527 . + 0 ID=cds-WP_029602569.1;Parent=gene-LI478_RS00315;Dbxref=Genbank:WP_029602569.1;Name=WP_029602569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229516.1;locus_tag=LI478_RS00315;product=NAD(P)-dependent oxidoreductase;protein_id=WP_029602569.1;transl_table=11 NZ_CP085478.1 RefSeq gene 62531 62806 . - . ID=gene-LI478_RS00320;Name=LI478_RS00320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00320 NZ_CP085478.1 Protein Homology CDS 62531 62806 . - 0 ID=cds-WP_073980564.1;Parent=gene-LI478_RS00320;Dbxref=Genbank:WP_073980564.1;Name=WP_073980564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229515.1;locus_tag=LI478_RS00320;product=hypothetical protein;protein_id=WP_073980564.1;transl_table=11 NZ_CP085478.1 RefSeq gene 62928 63866 . - . ID=gene-LI478_RS00325;Name=LI478_RS00325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00325 NZ_CP085478.1 Protein Homology CDS 62928 63866 . - 0 ID=cds-WP_004234160.1;Parent=gene-LI478_RS00325;Dbxref=Genbank:WP_004234160.1;Name=WP_004234160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229514.1;locus_tag=LI478_RS00325;product=DMT family transporter;protein_id=WP_004234160.1;transl_table=11 NZ_CP085478.1 RefSeq gene 63982 65415 . - . ID=gene-LI478_RS00330;Name=murP;gbkey=Gene;gene=murP;gene_biotype=protein_coding;locus_tag=LI478_RS00330 NZ_CP085478.1 Protein Homology CDS 63982 65415 . - 0 ID=cds-WP_004150245.1;Parent=gene-LI478_RS00330;Dbxref=Genbank:WP_004150245.1;Name=WP_004150245.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;gene=murP;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229513.1;locus_tag=LI478_RS00330;product=PTS N-acetylmuramic acid transporter subunit IIBC;protein_id=WP_004150245.1;transl_table=11 NZ_CP085478.1 RefSeq gene 65440 66342 . - . ID=gene-LI478_RS00335;Name=murQ;gbkey=Gene;gene=murQ;gene_biotype=protein_coding;locus_tag=LI478_RS00335 NZ_CP085478.1 Protein Homology CDS 65440 66342 . - 0 ID=cds-WP_064153042.1;Parent=gene-LI478_RS00335;Dbxref=Genbank:WP_064153042.1;Name=WP_064153042.1;Ontology_term=GO:0006040,GO:0009254,GO:0016835;gbkey=CDS;gene=murQ;go_function=carbon-oxygen lyase activity|0016835||IEA;go_process=amino sugar metabolic process|0006040||IEA,peptidoglycan turnover|0009254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229512.1;locus_tag=LI478_RS00335;product=N-acetylmuramic acid 6-phosphate etherase;protein_id=WP_064153042.1;transl_table=11 NZ_CP085478.1 RefSeq gene 66505 67668 . - . ID=gene-LI478_RS00340;Name=LI478_RS00340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00340 NZ_CP085478.1 Protein Homology CDS 66505 67668 . - 0 ID=cds-WP_064153043.1;Parent=gene-LI478_RS00340;Dbxref=Genbank:WP_064153043.1;Name=WP_064153043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229511.1;locus_tag=LI478_RS00340;product=multidrug effflux MFS transporter;protein_id=WP_064153043.1;transl_table=11 NZ_CP085478.1 RefSeq gene 67714 69078 . - . ID=gene-LI478_RS00345;Name=eefC;gbkey=Gene;gene=eefC;gene_biotype=protein_coding;locus_tag=LI478_RS00345 NZ_CP085478.1 Protein Homology CDS 67714 69078 . - 0 ID=cds-WP_004889164.1;Parent=gene-LI478_RS00345;Dbxref=Genbank:WP_004889164.1;Name=WP_004889164.1;gbkey=CDS;gene=eefC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229510.1;locus_tag=LI478_RS00345;product=multidrug efflux RND transporter outer membrane subunit EefC;protein_id=WP_004889164.1;transl_table=11 NZ_CP085478.1 RefSeq gene 69082 72189 . - . ID=gene-LI478_RS00350;Name=eefB;gbkey=Gene;gene=eefB;gene_biotype=protein_coding;locus_tag=LI478_RS00350 NZ_CP085478.1 Protein Homology CDS 69082 72189 . - 0 ID=cds-WP_227394160.1;Parent=gene-LI478_RS00350;Dbxref=Genbank:WP_227394160.1;Name=WP_227394160.1;gbkey=CDS;gene=eefB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229509.1;locus_tag=LI478_RS00350;product=multidrug efflux RND transporter permease subunit EefB;protein_id=WP_227394160.1;transl_table=11 NZ_CP085478.1 RefSeq gene 72189 73313 . - . ID=gene-LI478_RS00355;Name=eefA;gbkey=Gene;gene=eefA;gene_biotype=protein_coding;locus_tag=LI478_RS00355 NZ_CP085478.1 Protein Homology CDS 72189 73313 . - 0 ID=cds-WP_004150241.1;Parent=gene-LI478_RS00355;Dbxref=Genbank:WP_004150241.1;Name=WP_004150241.1;gbkey=CDS;gene=eefA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020077652.1;locus_tag=LI478_RS00355;product=multidrug efflux RND transporter periplasmic adaptor subunit EefA;protein_id=WP_004150241.1;transl_table=11 NZ_CP085478.1 RefSeq gene 73520 73642 . + . ID=gene-LI478_RS00360;Name=LI478_RS00360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00360 NZ_CP085478.1 Protein Homology CDS 73520 73642 . + 0 ID=cds-WP_004150240.1;Parent=gene-LI478_RS00360;Dbxref=Genbank:WP_004150240.1;Name=WP_004150240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229507.1;locus_tag=LI478_RS00360;product=hypothetical protein;protein_id=WP_004150240.1;transl_table=11 NZ_CP085478.1 RefSeq gene 73602 73718 . - . ID=gene-LI478_RS00365;Name=LI478_RS00365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00365 NZ_CP085478.1 Protein Homology CDS 73602 73718 . - 0 ID=cds-WP_014343452.1;Parent=gene-LI478_RS00365;Dbxref=Genbank:WP_014343452.1;Name=WP_014343452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229506.1;locus_tag=LI478_RS00365;product=hypothetical protein;protein_id=WP_014343452.1;transl_table=11 NZ_CP085478.1 RefSeq gene 73693 74109 . + . ID=gene-LI478_RS00370;Name=LI478_RS00370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00370 NZ_CP085478.1 Protein Homology CDS 73693 74109 . + 0 ID=cds-WP_009485154.1;Parent=gene-LI478_RS00370;Dbxref=Genbank:WP_009485154.1;Name=WP_009485154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229505.1;locus_tag=LI478_RS00370;product=GNAT family N-acetyltransferase;protein_id=WP_009485154.1;transl_table=11 NZ_CP085478.1 RefSeq gene 74669 75316 . - . ID=gene-LI478_RS00375;Name=LI478_RS00375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00375 NZ_CP085478.1 Protein Homology CDS 74669 75316 . - 0 ID=cds-WP_004181564.1;Parent=gene-LI478_RS00375;Dbxref=Genbank:WP_004181564.1;Name=WP_004181564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229503.1;locus_tag=LI478_RS00375;product=TetR/AcrR family transcriptional regulator;protein_id=WP_004181564.1;transl_table=11 NZ_CP085478.1 RefSeq gene 75397 76890 . + . ID=gene-LI478_RS00380;Name=LI478_RS00380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00380 NZ_CP085478.1 Protein Homology CDS 75397 76890 . + 0 ID=cds-WP_064153044.1;Parent=gene-LI478_RS00380;Dbxref=Genbank:WP_064153044.1;Name=WP_064153044.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229502.1;locus_tag=LI478_RS00380;product=MDR family MFS transporter;protein_id=WP_064153044.1;transl_table=11 NZ_CP085478.1 RefSeq gene 76887 77858 . - . ID=gene-LI478_RS00385;Name=LI478_RS00385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00385 NZ_CP085478.1 Protein Homology CDS 76887 77858 . - 0 ID=cds-WP_074185245.1;Parent=gene-LI478_RS00385;Dbxref=Genbank:WP_074185245.1;Name=WP_074185245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229501.1;locus_tag=LI478_RS00385;product=LysR family transcriptional regulator;protein_id=WP_074185245.1;transl_table=11 NZ_CP085478.1 RefSeq gene 77897 78523 . + . ID=gene-LI478_RS00390;Name=LI478_RS00390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00390 NZ_CP085478.1 Protein Homology CDS 77897 78523 . + 0 ID=cds-WP_040230731.1;Parent=gene-LI478_RS00390;Dbxref=Genbank:WP_040230731.1;Name=WP_040230731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229500.1;locus_tag=LI478_RS00390;product=pyridoxamine 5'-phosphate oxidase family protein;protein_id=WP_040230731.1;transl_table=11 NZ_CP085478.1 RefSeq gene 78526 78996 . + . ID=gene-LI478_RS00395;Name=LI478_RS00395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00395 NZ_CP085478.1 Protein Homology CDS 78526 78996 . + 0 ID=cds-WP_004173883.1;Parent=gene-LI478_RS00395;Dbxref=Genbank:WP_004173883.1;Name=WP_004173883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229499.1;locus_tag=LI478_RS00395;product=nuclear transport factor 2 family protein;protein_id=WP_004173883.1;transl_table=11 NZ_CP085478.1 RefSeq gene 79017 79553 . - . ID=gene-LI478_RS00400;Name=LI478_RS00400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00400 NZ_CP085478.1 Protein Homology CDS 79017 79553 . - 0 ID=cds-WP_032433699.1;Parent=gene-LI478_RS00400;Dbxref=Genbank:WP_032433699.1;Name=WP_032433699.1;Note=This protein belongs to a clade of uncharacterized proteins related to peroxidases such as the alkylhydroperoxidase AhpD.;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229498.1;locus_tag=LI478_RS00400;product=peroxidase-related enzyme;protein_id=WP_032433699.1;transl_table=11 NZ_CP085478.1 RefSeq gene 79670 80575 . + . ID=gene-LI478_RS00405;Name=LI478_RS00405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00405 NZ_CP085478.1 Protein Homology CDS 79670 80575 . + 0 ID=cds-WP_004150236.1;Parent=gene-LI478_RS00405;Dbxref=Genbank:WP_004150236.1;Name=WP_004150236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229497.1;locus_tag=LI478_RS00405;product=AraC family transcriptional regulator;protein_id=WP_004150236.1;transl_table=11 NZ_CP085478.1 RefSeq gene 80703 81512 . + . ID=gene-LI478_RS00410;Name=nlpA;gbkey=Gene;gene=nlpA;gene_biotype=protein_coding;locus_tag=LI478_RS00410 NZ_CP085478.1 Protein Homology CDS 80703 81512 . + 0 ID=cds-WP_227394161.1;Parent=gene-LI478_RS00410;Dbxref=Genbank:WP_227394161.1;Name=WP_227394161.1;gbkey=CDS;gene=nlpA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229496.1;locus_tag=LI478_RS00410;product=lipoprotein NlpA;protein_id=WP_227394161.1;transl_table=11 NZ_CP085478.1 RefSeq gene 81537 82391 . + . ID=gene-LI478_RS00415;Name=LI478_RS00415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00415 NZ_CP085478.1 Protein Homology CDS 81537 82391 . + 0 ID=cds-WP_002922972.1;Parent=gene-LI478_RS00415;Dbxref=Genbank:WP_002922972.1;Name=WP_002922972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229495.1;locus_tag=LI478_RS00415;product=DMT family transporter;protein_id=WP_002922972.1;transl_table=11 NZ_CP085478.1 RefSeq gene 82381 82941 . - . ID=gene-LI478_RS00420;Name=LI478_RS00420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00420 NZ_CP085478.1 Protein Homology CDS 82381 82941 . - 0 ID=cds-WP_009308807.1;Parent=gene-LI478_RS00420;Dbxref=Genbank:WP_009308807.1;Name=WP_009308807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229494.1;locus_tag=LI478_RS00420;product=NUDIX hydrolase;protein_id=WP_009308807.1;transl_table=11 NZ_CP085478.1 RefSeq gene 83107 83886 . + . ID=gene-LI478_RS00425;Name=LI478_RS00425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00425 NZ_CP085478.1 Protein Homology CDS 83107 83886 . + 0 ID=cds-WP_064277519.1;Parent=gene-LI478_RS00425;Dbxref=Genbank:WP_064277519.1;Name=WP_064277519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229493.1;locus_tag=LI478_RS00425;product=MBL fold metallo-hydrolase;protein_id=WP_064277519.1;transl_table=11 NZ_CP085478.1 RefSeq gene 83908 84861 . + . ID=gene-LI478_RS00430;Name=LI478_RS00430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00430 NZ_CP085478.1 Protein Homology CDS 83908 84861 . + 0 ID=cds-WP_009483940.1;Parent=gene-LI478_RS00430;Dbxref=Genbank:WP_009483940.1;Name=WP_009483940.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229492.1;locus_tag=LI478_RS00430;product=helix-turn-helix domain-containing protein;protein_id=WP_009483940.1;transl_table=11 NZ_CP085478.1 RefSeq gene 84858 85907 . - . ID=gene-LI478_RS00435;Name=LI478_RS00435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00435 NZ_CP085478.1 Protein Homology CDS 84858 85907 . - 0 ID=cds-WP_004901462.1;Parent=gene-LI478_RS00435;Dbxref=Genbank:WP_004901462.1;Name=WP_004901462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229491.1;locus_tag=LI478_RS00435;product=NAD(P)-dependent alcohol dehydrogenase;protein_id=WP_004901462.1;transl_table=11 NZ_CP085478.1 RefSeq gene 86280 86978 . + . ID=gene-LI478_RS00440;Name=LI478_RS00440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00440 NZ_CP085478.1 Protein Homology CDS 86280 86978 . + 0 ID=cds-WP_004151507.1;Parent=gene-LI478_RS00440;Dbxref=Genbank:WP_004151507.1;Name=WP_004151507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229490.1;locus_tag=LI478_RS00440;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_004151507.1;transl_table=11 NZ_CP085478.1 RefSeq gene 87029 87319 . - . ID=gene-LI478_RS00445;Name=LI478_RS00445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00445 NZ_CP085478.1 Protein Homology CDS 87029 87319 . - 0 ID=cds-WP_002922965.1;Parent=gene-LI478_RS00445;Dbxref=Genbank:WP_002922965.1;Name=WP_002922965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229489.1;locus_tag=LI478_RS00445;product=putative quinol monooxygenase;protein_id=WP_002922965.1;transl_table=11 NZ_CP085478.1 RefSeq gene 87321 88328 . - . ID=gene-LI478_RS00450;Name=LI478_RS00450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00450 NZ_CP085478.1 Protein Homology CDS 87321 88328 . - 0 ID=cds-WP_002922964.1;Parent=gene-LI478_RS00450;Dbxref=Genbank:WP_002922964.1;Name=WP_002922964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229488.1;locus_tag=LI478_RS00450;product=zinc-binding alcohol dehydrogenase family protein;protein_id=WP_002922964.1;transl_table=11 NZ_CP085478.1 RefSeq gene 88441 88908 . - . ID=gene-LI478_RS00455;Name=LI478_RS00455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00455 NZ_CP085478.1 Protein Homology CDS 88441 88908 . - 0 ID=cds-WP_002922963.1;Parent=gene-LI478_RS00455;Dbxref=Genbank:WP_002922963.1;Name=WP_002922963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229487.1;locus_tag=LI478_RS00455;product=DUF3237 domain-containing protein;protein_id=WP_002922963.1;transl_table=11 NZ_CP085478.1 RefSeq gene 89076 89170 . - . ID=gene-LI478_RS00460;Name=LI478_RS00460;gbkey=Gene;gene_biotype=tRNA;locus_tag=LI478_RS00460 NZ_CP085478.1 tRNAscan-SE tRNA 89076 89170 . - . ID=rna-LI478_RS00460;Parent=gene-LI478_RS00460;anticodon=(pos:complement(89134..89136));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS00460;product=tRNA-Sec NZ_CP085478.1 tRNAscan-SE exon 89076 89170 . - . ID=exon-LI478_RS00460-1;Parent=rna-LI478_RS00460;anticodon=(pos:complement(89134..89136));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS00460;product=tRNA-Sec NZ_CP085478.1 RefSeq gene 89463 90857 . + . ID=gene-LI478_RS00465;Name=LI478_RS00465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00465 NZ_CP085478.1 Protein Homology CDS 89463 90857 . + 0 ID=cds-WP_002922962.1;Parent=gene-LI478_RS00465;Dbxref=Genbank:WP_002922962.1;Name=WP_002922962.1;Ontology_term=GO:0006814,GO:0008643,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229486.1;locus_tag=LI478_RS00465;product=glycoside-pentoside-hexuronide family transporter;protein_id=WP_002922962.1;transl_table=11 NZ_CP085478.1 RefSeq gene 90870 93188 . + . ID=gene-LI478_RS00470;Name=yicI;gbkey=Gene;gene=yicI;gene_biotype=protein_coding;locus_tag=LI478_RS00470 NZ_CP085478.1 Protein Homology CDS 90870 93188 . + 0 ID=cds-WP_032415817.1;Parent=gene-LI478_RS00470;Dbxref=Genbank:WP_032415817.1;Name=WP_032415817.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=yicI;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229485.1;locus_tag=LI478_RS00470;product=alpha-xylosidase;protein_id=WP_032415817.1;transl_table=11 NZ_CP085478.1 RefSeq gene 93344 94066 . + . ID=gene-LI478_RS00475;Name=LI478_RS00475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00475 NZ_CP085478.1 Protein Homology CDS 93344 94066 . + 0 ID=cds-WP_004889196.1;Parent=gene-LI478_RS00475;Dbxref=Genbank:WP_004889196.1;Name=WP_004889196.1;Ontology_term=GO:1901135,GO:0097367;gbkey=CDS;go_function=carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229484.1;locus_tag=LI478_RS00475;product=SIS domain-containing protein;protein_id=WP_004889196.1;transl_table=11 NZ_CP085478.1 RefSeq gene 94257 95636 . - . ID=gene-LI478_RS00480;Name=LI478_RS00480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00480 NZ_CP085478.1 Protein Homology CDS 94257 95636 . - 0 ID=cds-WP_004150228.1;Parent=gene-LI478_RS00480;Dbxref=Genbank:WP_004150228.1;Name=WP_004150228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229483.1;locus_tag=LI478_RS00480;product=glycoside hydrolase;protein_id=WP_004150228.1;transl_table=11 NZ_CP085478.1 RefSeq gene 95649 97208 . - . ID=gene-LI478_RS00485;Name=LI478_RS00485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00485 NZ_CP085478.1 Protein Homology CDS 95649 97208 . - 0 ID=cds-WP_032437407.1;Parent=gene-LI478_RS00485;Dbxref=Genbank:WP_032437407.1;Name=WP_032437407.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229482.1;locus_tag=LI478_RS00485;product=PTS transporter subunit EIIC;protein_id=WP_032437407.1;transl_table=11 NZ_CP085478.1 RefSeq gene 97454 99169 . - . ID=gene-LI478_RS00490;Name=LI478_RS00490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00490 NZ_CP085478.1 Protein Homology CDS 97454 99169 . - 0 ID=cds-WP_063417066.1;Parent=gene-LI478_RS00490;Dbxref=Genbank:WP_063417066.1;Name=WP_063417066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229481.1;locus_tag=LI478_RS00490;product=AsmA family protein;protein_id=WP_063417066.1;transl_table=11 NZ_CP085478.1 RefSeq gene 99310 100701 . - . ID=gene-LI478_RS00495;Name=LI478_RS00495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00495 NZ_CP085478.1 Protein Homology CDS 99310 100701 . - 0 ID=cds-WP_002922950.1;Parent=gene-LI478_RS00495;Dbxref=Genbank:WP_002922950.1;Name=WP_002922950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229480.1;locus_tag=LI478_RS00495;product=uracil-xanthine permease family protein;protein_id=WP_002922950.1;transl_table=11 NZ_CP085478.1 RefSeq gene 100986 102188 . + . ID=gene-LI478_RS00500;Name=gltS;gbkey=Gene;gene=gltS;gene_biotype=protein_coding;locus_tag=LI478_RS00500 NZ_CP085478.1 Protein Homology CDS 100986 102188 . + 0 ID=cds-WP_002922948.1;Parent=gene-LI478_RS00500;Dbxref=Genbank:WP_002922948.1;Name=WP_002922948.1;Ontology_term=GO:0015813,GO:0015501;gbkey=CDS;gene=gltS;go_function=glutamate:sodium symporter activity|0015501||IEA;go_process=L-glutamate transmembrane transport|0015813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229478.1;locus_tag=LI478_RS00500;product=sodium/glutamate symporter;protein_id=WP_002922948.1;transl_table=11 NZ_CP085478.1 RefSeq gene 102303 103814 . - . ID=gene-LI478_RS00505;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=LI478_RS00505 NZ_CP085478.1 Protein Homology CDS 102303 103814 . - 0 ID=cds-WP_002922944.1;Parent=gene-LI478_RS00505;Dbxref=Genbank:WP_002922944.1;Name=WP_002922944.1;Ontology_term=GO:0006071,GO:0004370;gbkey=CDS;gene=glpK;go_function=glycerol kinase activity|0004370||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229477.1;locus_tag=LI478_RS00505;product=glycerol kinase GlpK;protein_id=WP_002922944.1;transl_table=11 NZ_CP085478.1 RefSeq gene 103836 104687 . - . ID=gene-LI478_RS00510;Name=LI478_RS00510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00510 NZ_CP085478.1 Protein Homology CDS 103836 104687 . - 0 ID=cds-WP_002922941.1;Parent=gene-LI478_RS00510;Dbxref=Genbank:WP_002922941.1;Name=WP_002922941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229476.1;locus_tag=LI478_RS00510;product=aquaporin;protein_id=WP_002922941.1;transl_table=11 NZ_CP085478.1 RefSeq gene 105130 105375 . + . ID=gene-LI478_RS00515;Name=zapB;gbkey=Gene;gene=zapB;gene_biotype=protein_coding;locus_tag=LI478_RS00515 NZ_CP085478.1 Protein Homology CDS 105130 105375 . + 0 ID=cds-WP_004150222.1;Parent=gene-LI478_RS00515;Dbxref=Genbank:WP_004150222.1;Name=WP_004150222.1;gbkey=CDS;gene=zapB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418363.1;locus_tag=LI478_RS00515;product=septal ring assembly protein ZapB;protein_id=WP_004150222.1;transl_table=11 NZ_CP085478.1 RefSeq gene 105527 106516 . + . ID=gene-LI478_RS00520;Name=LI478_RS00520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00520 NZ_CP085478.1 Protein Homology CDS 105527 106516 . + 0 ID=cds-WP_002922936.1;Parent=gene-LI478_RS00520;Dbxref=Genbank:WP_002922936.1;Name=WP_002922936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133064.1;locus_tag=LI478_RS00520;product=sulfate ABC transporter substrate-binding protein;protein_id=WP_002922936.1;transl_table=11 NZ_CP085478.1 RefSeq gene 106679 107449 . + . ID=gene-LI478_RS00525;Name=LI478_RS00525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00525 NZ_CP085478.1 Protein Homology CDS 106679 107449 . + 0 ID=cds-WP_020803798.1;Parent=gene-LI478_RS00525;Dbxref=Genbank:WP_020803798.1;Name=WP_020803798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229473.1;locus_tag=LI478_RS00525;product=CDP-diacylglycerol diphosphatase;protein_id=WP_020803798.1;transl_table=11 NZ_CP085478.1 RefSeq gene 107514 108818 . + . ID=gene-LI478_RS00530;Name=LI478_RS00530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00530 NZ_CP085478.1 Protein Homology CDS 107514 108818 . + 0 ID=cds-WP_004151505.1;Parent=gene-LI478_RS00530;Dbxref=Genbank:WP_004151505.1;Name=WP_004151505.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229472.1;locus_tag=LI478_RS00530;product=SLC13 family permease;protein_id=WP_004151505.1;transl_table=11 NZ_CP085478.1 RefSeq gene 108911 109678 . - . ID=gene-LI478_RS00535;Name=tpiA;gbkey=Gene;gene=tpiA;gene_biotype=protein_coding;locus_tag=LI478_RS00535 NZ_CP085478.1 Protein Homology CDS 108911 109678 . - 0 ID=cds-WP_002922909.1;Parent=gene-LI478_RS00535;Dbxref=Genbank:WP_002922909.1;Name=WP_002922909.1;Ontology_term=GO:0006096,GO:0004807;gbkey=CDS;gene=tpiA;go_function=triose-phosphate isomerase activity|0004807||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229471.1;locus_tag=LI478_RS00535;product=triose-phosphate isomerase;protein_id=WP_002922909.1;transl_table=11 NZ_CP085478.1 RefSeq gene 109788 110390 . - . ID=gene-LI478_RS00540;Name=LI478_RS00540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00540 NZ_CP085478.1 Protein Homology CDS 109788 110390 . - 0 ID=cds-WP_002922908.1;Parent=gene-LI478_RS00540;Dbxref=Genbank:WP_002922908.1;Name=WP_002922908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229470.1;locus_tag=LI478_RS00540;product=YiiQ family protein;protein_id=WP_002922908.1;transl_table=11 NZ_CP085478.1 RefSeq gene 110503 110931 . + . ID=gene-LI478_RS00545;Name=LI478_RS00545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00545 NZ_CP085478.1 Protein Homology CDS 110503 110931 . + 0 ID=cds-WP_002922907.1;Parent=gene-LI478_RS00545;Dbxref=Genbank:WP_002922907.1;Name=WP_002922907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229469.1;locus_tag=LI478_RS00545;product=DUF805 domain-containing protein;protein_id=WP_002922907.1;transl_table=11 NZ_CP085478.1 RefSeq gene 110932 111678 . - . ID=gene-LI478_RS00550;Name=fpr;gbkey=Gene;gene=fpr;gene_biotype=protein_coding;locus_tag=LI478_RS00550 NZ_CP085478.1 Protein Homology CDS 110932 111678 . - 0 ID=cds-WP_004173895.1;Parent=gene-LI478_RS00550;Dbxref=Genbank:WP_004173895.1;Name=WP_004173895.1;Ontology_term=GO:0004324;gbkey=CDS;gene=fpr;go_function=ferredoxin-NADP+ reductase activity|0004324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229468.1;locus_tag=LI478_RS00550;product=ferredoxin--NADP(+) reductase;protein_id=WP_004173895.1;transl_table=11 NZ_CP085478.1 RefSeq gene 111829 112839 . - . ID=gene-LI478_RS00555;Name=glpX;gbkey=Gene;gene=glpX;gene_biotype=protein_coding;locus_tag=LI478_RS00555 NZ_CP085478.1 Protein Homology CDS 111829 112839 . - 0 ID=cds-WP_002922903.1;Parent=gene-LI478_RS00555;Dbxref=Genbank:WP_002922903.1;Name=WP_002922903.1;Ontology_term=GO:0006094,GO:0042132;gbkey=CDS;gene=glpX;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229467.1;locus_tag=LI478_RS00555;product=class II fructose-bisphosphatase;protein_id=WP_002922903.1;transl_table=11 NZ_CP085478.1 RefSeq gene 112888 114969 . - . ID=gene-LI478_RS00560;Name=recG;gbkey=Gene;gene=recG;gene_biotype=protein_coding;locus_tag=LI478_RS00560 NZ_CP085478.1 Protein Homology CDS 112888 114969 . - 0 ID=cds-WP_004151504.1;Parent=gene-LI478_RS00560;Dbxref=Genbank:WP_004151504.1;Name=WP_004151504.1;Ontology_term=GO:0006281,GO:0006310,GO:0003676,GO:0003678,GO:0005524;gbkey=CDS;gene=recG;go_function=nucleic acid binding|0003676||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229466.1;locus_tag=LI478_RS00560;product=ATP-dependent DNA helicase RecG;protein_id=WP_004151504.1;transl_table=11 NZ_CP085478.1 RefSeq gene 114975 115664 . - . ID=gene-LI478_RS00565;Name=trmH;gbkey=Gene;gene=trmH;gene_biotype=protein_coding;locus_tag=LI478_RS00565 NZ_CP085478.1 Protein Homology CDS 114975 115664 . - 0 ID=cds-WP_004181538.1;Parent=gene-LI478_RS00565;Dbxref=Genbank:WP_004181538.1;Name=WP_004181538.1;Ontology_term=GO:0030488,GO:0008173,GO:0009020;gbkey=CDS;gene=trmH;go_function=RNA methyltransferase activity|0008173||IEA,tRNA (guanosine-2'-O-)-methyltransferase activity|0009020||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229465.1;locus_tag=LI478_RS00565;product=tRNA (guanosine(18)-2'-O)-methyltransferase TrmH;protein_id=WP_004181538.1;transl_table=11 NZ_CP085478.1 RefSeq gene 115669 117789 . - . ID=gene-LI478_RS00570;Name=spoT;gbkey=Gene;gene=spoT;gene_biotype=protein_coding;locus_tag=LI478_RS00570 NZ_CP085478.1 Protein Homology CDS 115669 117789 . - 0 ID=cds-WP_004150214.1;Parent=gene-LI478_RS00570;Dbxref=Genbank:WP_004150214.1;Name=WP_004150214.1;Ontology_term=GO:0015969,GO:0008728,GO:0008893;gbkey=CDS;gene=spoT;go_function=GTP diphosphokinase activity|0008728||IEA,guanosine-3'%2C5'-bis(diphosphate) 3'-diphosphatase activity|0008893||IEA;go_process=guanosine tetraphosphate metabolic process|0015969||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229464.1;locus_tag=LI478_RS00570;product=bifunctional GTP diphosphokinase/guanosine-3'%2C5'-bis pyrophosphate 3'-pyrophosphohydrolase;protein_id=WP_004150214.1;transl_table=11 NZ_CP085478.1 RefSeq gene 117808 118083 . - . ID=gene-LI478_RS00575;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=LI478_RS00575 NZ_CP085478.1 Protein Homology CDS 117808 118083 . - 0 ID=cds-WP_000135058.1;Parent=gene-LI478_RS00575;Dbxref=Genbank:WP_000135058.1;Name=WP_000135058.1;Ontology_term=GO:0006351,GO:0003899,GO:0000345;gbkey=CDS;gene=rpoZ;go_component=cytosolic DNA-directed RNA polymerase complex|0000345||IEA;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013511051.1;locus_tag=LI478_RS00575;product=DNA-directed RNA polymerase subunit omega;protein_id=WP_000135058.1;transl_table=11 NZ_CP085478.1 RefSeq gene 118138 118761 . - . ID=gene-LI478_RS00580;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=protein_coding;locus_tag=LI478_RS00580 NZ_CP085478.1 Protein Homology CDS 118138 118761 . - 0 ID=cds-WP_002922664.1;Parent=gene-LI478_RS00580;Dbxref=Genbank:WP_002922664.1;Name=WP_002922664.1;Ontology_term=GO:0015949,GO:0004385;gbkey=CDS;gene=gmk;go_function=guanylate kinase activity|0004385||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000046969.1;locus_tag=LI478_RS00580;product=guanylate kinase;protein_id=WP_002922664.1;transl_table=11 NZ_CP085478.1 RefSeq gene 119020 120696 . + . ID=gene-LI478_RS00585;Name=ligB;gbkey=Gene;gene=ligB;gene_biotype=protein_coding;locus_tag=LI478_RS00585 NZ_CP085478.1 Protein Homology CDS 119020 120696 . + 0 ID=cds-WP_021313902.1;Parent=gene-LI478_RS00585;Dbxref=Genbank:WP_021313902.1;Name=WP_021313902.1;Ontology_term=GO:0006260,GO:0006281,GO:0003911;gbkey=CDS;gene=ligB;go_function=DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229461.1;locus_tag=LI478_RS00585;product=NAD-dependent DNA ligase LigB;protein_id=WP_021313902.1;transl_table=11 NZ_CP085478.1 RefSeq gene 120702 121319 . - . ID=gene-LI478_RS00590;Name=LI478_RS00590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00590 NZ_CP085478.1 Protein Homology CDS 120702 121319 . - 0 ID=cds-WP_002922654.1;Parent=gene-LI478_RS00590;Dbxref=Genbank:WP_002922654.1;Name=WP_002922654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229460.1;locus_tag=LI478_RS00590;product=trimeric intracellular cation channel family protein;protein_id=WP_002922654.1;transl_table=11 NZ_CP085478.1 RefSeq gene 121595 122845 . + . ID=gene-LI478_RS00595;Name=LI478_RS00595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00595 NZ_CP085478.1 Protein Homology CDS 121595 122845 . + 0 ID=cds-WP_004188107.1;Parent=gene-LI478_RS00595;Dbxref=Genbank:WP_004188107.1;Name=WP_004188107.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229459.1;locus_tag=LI478_RS00595;product=chloride channel protein;protein_id=WP_004188107.1;transl_table=11 NZ_CP085478.1 RefSeq gene 122901 123959 . - . ID=gene-LI478_RS00600;Name=LI478_RS00600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00600 NZ_CP085478.1 Protein Homology CDS 122901 123959 . - 0 ID=cds-WP_227394162.1;Parent=gene-LI478_RS00600;Dbxref=Genbank:WP_227394162.1;Name=WP_227394162.1;Ontology_term=GO:0006281,GO:0003908;gbkey=CDS;go_function=methylated-DNA-[protein]-cysteine S-methyltransferase activity|0003908||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229458.1;locus_tag=LI478_RS00600;product=methylated-DNA--[protein]-cysteine S-methyltransferase;protein_id=WP_227394162.1;transl_table=11 NZ_CP085478.1 RefSeq gene 123962 124708 . - . ID=gene-LI478_RS00605;Name=LI478_RS00605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00605 NZ_CP085478.1 Protein Homology CDS 123962 124708 . - 0 ID=cds-WP_004181536.1;Parent=gene-LI478_RS00605;Dbxref=Genbank:WP_004181536.1;Name=WP_004181536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229457.1;locus_tag=LI478_RS00605;product=isocitrate lyase/phosphoenolpyruvate mutase family protein;protein_id=WP_004181536.1;transl_table=11 NZ_CP085478.1 RefSeq gene 124891 125754 . - . ID=gene-LI478_RS00610;Name=LI478_RS00610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00610 NZ_CP085478.1 Protein Homology CDS 124891 125754 . - 0 ID=cds-WP_002922636.1;Parent=gene-LI478_RS00610;Dbxref=Genbank:WP_002922636.1;Name=WP_002922636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122606.1;locus_tag=LI478_RS00610;product=YicC family protein;protein_id=WP_002922636.1;transl_table=11 NZ_CP085478.1 RefSeq gene 126254 127954 . + . ID=gene-LI478_RS00615;Name=LI478_RS00615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00615 NZ_CP085478.1 Protein Homology CDS 126254 127954 . + 0 ID=cds-WP_064153047.1;Parent=gene-LI478_RS00615;Dbxref=Genbank:WP_064153047.1;Name=WP_064153047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229453.1;locus_tag=LI478_RS00615;product=lysophospholipid acyltransferase family protein;protein_id=WP_064153047.1;transl_table=11 NZ_CP085478.1 RefSeq gene 127992 128123 . - . ID=gene-LI478_RS00620;Name=LI478_RS00620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00620 NZ_CP085478.1 Protein Homology CDS 127992 128123 . - 0 ID=cds-WP_073511465.1;Parent=gene-LI478_RS00620;Dbxref=Genbank:WP_073511465.1;Name=WP_073511465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229452.1;locus_tag=LI478_RS00620;product=hypothetical protein;protein_id=WP_073511465.1;transl_table=11 NZ_CP085478.1 RefSeq gene 128122 128976 . + . ID=gene-LI478_RS00625;Name=LI478_RS00625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00625 NZ_CP085478.1 Protein Homology CDS 128122 128976 . + 0 ID=cds-WP_194433118.1;Parent=gene-LI478_RS00625;Dbxref=Genbank:WP_194433118.1;Name=WP_194433118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229451.1;locus_tag=LI478_RS00625;product=HlyD family efflux transporter periplasmic adaptor subunit;protein_id=WP_194433118.1;transl_table=11 NZ_CP085478.1 RefSeq gene 128994 129962 . + . ID=gene-LI478_RS00630;Name=LI478_RS00630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00630 NZ_CP085478.1 Protein Homology CDS 128994 129962 . + 0 ID=cds-WP_004225014.1;Parent=gene-LI478_RS00630;Dbxref=Genbank:WP_004225014.1;Name=WP_004225014.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=LI478_RS00630;product=IS5 family transposase;protein_id=WP_004225014.1;transl_table=11 NZ_CP085478.1 RefSeq gene 130308 131828 . - . ID=gene-LI478_RS00635;Name=LI478_RS00635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00635 NZ_CP085478.1 Protein Homology CDS 130308 131828 . - 0 ID=cds-WP_004174747.1;Parent=gene-LI478_RS00635;Dbxref=Genbank:WP_004174747.1;Name=WP_004174747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015370094.1;locus_tag=LI478_RS00635;product=aldehyde dehydrogenase;protein_id=WP_004174747.1;transl_table=11 NZ_CP085478.1 RefSeq gene 132093 133880 . + . ID=gene-LI478_RS00640;Name=LI478_RS00640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00640 NZ_CP085478.1 Protein Homology CDS 132093 133880 . + 0 ID=cds-WP_020316949.1;Parent=gene-LI478_RS00640;Dbxref=Genbank:WP_020316949.1;Name=WP_020316949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228363.1;locus_tag=LI478_RS00640;product=sigma-54-dependent Fis family transcriptional regulator;protein_id=WP_020316949.1;transl_table=11 NZ_CP085478.1 RefSeq gene 133963 134871 . - . ID=gene-LI478_RS00645;Name=LI478_RS00645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00645 NZ_CP085478.1 Protein Homology CDS 133963 134871 . - 0 ID=cds-WP_227394163.1;Parent=gene-LI478_RS00645;Dbxref=Genbank:WP_227394163.1;Name=WP_227394163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228364.1;locus_tag=LI478_RS00645;product=LysR family transcriptional regulator;protein_id=WP_227394163.1;transl_table=11 NZ_CP085478.1 RefSeq gene 134975 135580 . + . ID=gene-LI478_RS00650;Name=LI478_RS00650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00650 NZ_CP085478.1 Protein Homology CDS 134975 135580 . + 0 ID=cds-WP_064153093.1;Parent=gene-LI478_RS00650;Dbxref=Genbank:WP_064153093.1;Name=WP_064153093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228365.1;locus_tag=LI478_RS00650;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_064153093.1;transl_table=11 NZ_CP085478.1 RefSeq gene 135656 135955 . + . ID=gene-LI478_RS00655;Name=LI478_RS00655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00655 NZ_CP085478.1 Protein Homology CDS 135656 135955 . + 0 ID=cds-WP_002914277.1;Parent=gene-LI478_RS00655;Dbxref=Genbank:WP_002914277.1;Name=WP_002914277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228366.1;locus_tag=LI478_RS00655;product=metalloregulator ArsR/SmtB family transcription factor;protein_id=WP_002914277.1;transl_table=11 NZ_CP085478.1 RefSeq gene 135963 136508 . + . ID=gene-LI478_RS00660;Name=LI478_RS00660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00660 NZ_CP085478.1 Protein Homology CDS 135963 136508 . + 0 ID=cds-WP_004900029.1;Parent=gene-LI478_RS00660;Dbxref=Genbank:WP_004900029.1;Name=WP_004900029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228367.1;locus_tag=LI478_RS00660;product=rhodanese family protein;protein_id=WP_004900029.1;transl_table=11 NZ_CP085478.1 RefSeq gene 136489 137391 . - . ID=gene-LI478_RS00665;Name=lpxO;gbkey=Gene;gene=lpxO;gene_biotype=protein_coding;locus_tag=LI478_RS00665 NZ_CP085478.1 Protein Homology CDS 136489 137391 . - 0 ID=cds-WP_002914281.1;Parent=gene-LI478_RS00665;Dbxref=Genbank:WP_002914281.1;Name=WP_002914281.1;Ontology_term=GO:0018193;gbkey=CDS;gene=lpxO;go_process=peptidyl-amino acid modification|0018193||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228368.1;locus_tag=LI478_RS00665;product=lipid A hydroxylase LpxO;protein_id=WP_002914281.1;transl_table=11 NZ_CP085478.1 RefSeq gene 137597 137776 . + . ID=gene-LI478_RS00670;Name=LI478_RS00670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00670 NZ_CP085478.1 Protein Homology CDS 137597 137776 . + 0 ID=cds-WP_002914284.1;Parent=gene-LI478_RS00670;Dbxref=Genbank:WP_002914284.1;Name=WP_002914284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228369.1;locus_tag=LI478_RS00670;product=hypothetical protein;protein_id=WP_002914284.1;transl_table=11 NZ_CP085478.1 RefSeq gene 137849 138250 . - . ID=gene-LI478_RS00675;Name=stpA;gbkey=Gene;gene=stpA;gene_biotype=protein_coding;locus_tag=LI478_RS00675 NZ_CP085478.1 Protein Homology CDS 137849 138250 . - 0 ID=cds-WP_002914287.1;Parent=gene-LI478_RS00675;Dbxref=Genbank:WP_002914287.1;Name=WP_002914287.1;gbkey=CDS;gene=stpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004205720.1;locus_tag=LI478_RS00675;product=DNA-binding protein StpA;protein_id=WP_002914287.1;transl_table=11 NZ_CP085478.1 RefSeq gene 138979 139428 . + . ID=gene-LI478_RS00680;Name=alaE;gbkey=Gene;gene=alaE;gene_biotype=protein_coding;locus_tag=LI478_RS00680 NZ_CP085478.1 Protein Homology CDS 138979 139428 . + 0 ID=cds-WP_002914289.1;Parent=gene-LI478_RS00680;Dbxref=Genbank:WP_002914289.1;Name=WP_002914289.1;gbkey=CDS;gene=alaE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228372.1;locus_tag=LI478_RS00680;product=L-alanine exporter AlaE;protein_id=WP_002914289.1;transl_table=11 NZ_CP085478.1 RefSeq gene 139514 139876 . - . ID=gene-LI478_RS00685;Name=LI478_RS00685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00685 NZ_CP085478.1 Protein Homology CDS 139514 139876 . - 0 ID=cds-WP_002914291.1;Parent=gene-LI478_RS00685;Dbxref=Genbank:WP_002914291.1;Name=WP_002914291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228373.1;locus_tag=LI478_RS00685;product=DUF2002 family protein;protein_id=WP_002914291.1;transl_table=11 NZ_CP085478.1 RefSeq gene 140026 140373 . + . ID=gene-LI478_RS00690;Name=LI478_RS00690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00690 NZ_CP085478.1 Protein Homology CDS 140026 140373 . + 0 ID=cds-WP_002914293.1;Parent=gene-LI478_RS00690;Dbxref=Genbank:WP_002914293.1;Name=WP_002914293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228374.1;locus_tag=LI478_RS00690;product=DUF883 domain-containing protein;protein_id=WP_002914293.1;transl_table=11 NZ_CP085478.1 RefSeq gene 140517 141869 . - . ID=gene-LI478_RS00695;Name=LI478_RS00695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00695 NZ_CP085478.1 Protein Homology CDS 140517 141869 . - 0 ID=cds-WP_004149442.1;Parent=gene-LI478_RS00695;Dbxref=Genbank:WP_004149442.1;Name=WP_004149442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228375.1;locus_tag=LI478_RS00695;product=PLP-dependent aminotransferase family protein;protein_id=WP_004149442.1;transl_table=11 NZ_CP085478.1 RefSeq gene 141958 142389 . + . ID=gene-LI478_RS00700;Name=LI478_RS00700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00700 NZ_CP085478.1 Protein Homology CDS 141958 142389 . + 0 ID=cds-WP_064153092.1;Parent=gene-LI478_RS00700;Dbxref=Genbank:WP_064153092.1;Name=WP_064153092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228376.1;locus_tag=LI478_RS00700;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_064153092.1;transl_table=11 NZ_CP085478.1 RefSeq gene 142573 142818 . + . ID=gene-LI478_RS00705;Name=nrdH;gbkey=Gene;gene=nrdH;gene_biotype=protein_coding;locus_tag=LI478_RS00705 NZ_CP085478.1 Protein Homology CDS 142573 142818 . + 0 ID=cds-WP_002914320.1;Parent=gene-LI478_RS00705;Dbxref=Genbank:WP_002914320.1;Name=WP_002914320.1;gbkey=CDS;gene=nrdH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228377.1;locus_tag=LI478_RS00705;product=glutaredoxin-like protein NrdH;protein_id=WP_002914320.1;transl_table=11 NZ_CP085478.1 RefSeq gene 142815 143225 . + . ID=gene-LI478_RS00710;Name=nrdI;gbkey=Gene;gene=nrdI;gene_biotype=protein_coding;locus_tag=LI478_RS00710 NZ_CP085478.1 Protein Homology CDS 142815 143225 . + 0 ID=cds-WP_002914321.1;Parent=gene-LI478_RS00710;Dbxref=Genbank:WP_002914321.1;Name=WP_002914321.1;Ontology_term=GO:0009263;gbkey=CDS;gene=nrdI;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228378.1;locus_tag=LI478_RS00710;product=class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI;protein_id=WP_002914321.1;transl_table=11 NZ_CP085478.1 RefSeq gene 143198 145339 . + . ID=gene-LI478_RS00715;Name=nrdE;gbkey=Gene;gene=nrdE;gene_biotype=protein_coding;locus_tag=LI478_RS00715 NZ_CP085478.1 Protein Homology CDS 143198 145339 . + 0 ID=cds-WP_064153091.1;Parent=gene-LI478_RS00715;Dbxref=Genbank:WP_064153091.1;Name=WP_064153091.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdE;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228379.1;locus_tag=LI478_RS00715;product=class 1b ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_064153091.1;transl_table=11 NZ_CP085478.1 RefSeq gene 145350 146312 . + . ID=gene-LI478_RS00720;Name=nrdF;gbkey=Gene;gene=nrdF;gene_biotype=protein_coding;locus_tag=LI478_RS00720 NZ_CP085478.1 Protein Homology CDS 145350 146312 . + 0 ID=cds-WP_002914327.1;Parent=gene-LI478_RS00720;Dbxref=Genbank:WP_002914327.1;Name=WP_002914327.1;Ontology_term=GO:0009265,GO:0004748,GO:0030145,GO:0005971;gbkey=CDS;gene=nrdF;go_component=ribonucleoside-diphosphate reductase complex|0005971||IEA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,manganese ion binding|0030145||IEA;go_process=2'-deoxyribonucleotide biosynthetic process|0009265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228380.1;locus_tag=LI478_RS00720;product=class 1b ribonucleoside-diphosphate reductase subunit beta;protein_id=WP_002914327.1;transl_table=11 NZ_CP085478.1 RefSeq gene 146670 147872 . + . ID=gene-LI478_RS00725;Name=proV;gbkey=Gene;gene=proV;gene_biotype=protein_coding;locus_tag=LI478_RS00725 NZ_CP085478.1 Protein Homology CDS 146670 147872 . + 0 ID=cds-WP_002914328.1;Parent=gene-LI478_RS00725;Dbxref=Genbank:WP_002914328.1;Name=WP_002914328.1;Ontology_term=GO:0031460,GO:0005524;gbkey=CDS;gene=proV;go_function=ATP binding|0005524||IEA;go_process=glycine betaine transport|0031460||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228381.1;locus_tag=LI478_RS00725;product=glycine betaine/L-proline ABC transporter ATP-binding protein ProV;protein_id=WP_002914328.1;transl_table=11 NZ_CP085478.1 RefSeq gene 147865 148932 . + . ID=gene-LI478_RS00730;Name=proW;gbkey=Gene;gene=proW;gene_biotype=protein_coding;locus_tag=LI478_RS00730 NZ_CP085478.1 Protein Homology CDS 147865 148932 . + 0 ID=cds-WP_064153090.1;Parent=gene-LI478_RS00730;Dbxref=Genbank:WP_064153090.1;Name=WP_064153090.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=proW;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228382.1;locus_tag=LI478_RS00730;product=glycine betaine/L-proline ABC transporter permease ProW;protein_id=WP_064153090.1;transl_table=11 NZ_CP085478.1 RefSeq gene 149011 150009 . + . ID=gene-LI478_RS00735;Name=proX;gbkey=Gene;gene=proX;gene_biotype=protein_coding;locus_tag=LI478_RS00735 NZ_CP085478.1 Protein Homology CDS 149011 150009 . + 0 ID=cds-WP_002914330.1;Parent=gene-LI478_RS00735;Dbxref=Genbank:WP_002914330.1;Name=WP_002914330.1;Ontology_term=GO:0055085,GO:0022857,GO:0043190;gbkey=CDS;gene=proX;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228383.1;locus_tag=LI478_RS00735;product=glycine betaine/L-proline ABC transporter substrate-binding protein ProX;protein_id=WP_002914330.1;transl_table=11 NZ_CP085478.1 RefSeq gene 150188 150934 . + . ID=gene-LI478_RS00740;Name=LI478_RS00740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00740 NZ_CP085478.1 Protein Homology CDS 150188 150934 . + 0 ID=cds-WP_004180986.1;Parent=gene-LI478_RS00740;Dbxref=Genbank:WP_004180986.1;Name=WP_004180986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228384.1;locus_tag=LI478_RS00740;product=AzlC family ABC transporter permease;protein_id=WP_004180986.1;transl_table=11 NZ_CP085478.1 RefSeq gene 150924 151259 . + . ID=gene-LI478_RS00745;Name=ygaH;gbkey=Gene;gene=ygaH;gene_biotype=protein_coding;locus_tag=LI478_RS00745 NZ_CP085478.1 Protein Homology CDS 150924 151259 . + 0 ID=cds-WP_004174712.1;Parent=gene-LI478_RS00745;Dbxref=Genbank:WP_004174712.1;Name=WP_004174712.1;gbkey=CDS;gene=ygaH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228385.1;locus_tag=LI478_RS00745;product=L-valine transporter subunit YgaH;protein_id=WP_004174712.1;transl_table=11 NZ_CP085478.1 RefSeq gene 151350 151880 . + . ID=gene-LI478_RS00750;Name=mprA;gbkey=Gene;gene=mprA;gene_biotype=protein_coding;locus_tag=LI478_RS00750 NZ_CP085478.1 Protein Homology CDS 151350 151880 . + 0 ID=cds-WP_002914337.1;Parent=gene-LI478_RS00750;Dbxref=Genbank:WP_002914337.1;Name=WP_002914337.1;gbkey=CDS;gene=mprA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228387.1;locus_tag=LI478_RS00750;product=transcriptional repressor MprA;protein_id=WP_002914337.1;transl_table=11 NZ_CP085478.1 RefSeq gene 152006 153178 . + . ID=gene-LI478_RS00755;Name=emrA;gbkey=Gene;gene=emrA;gene_biotype=protein_coding;locus_tag=LI478_RS00755 NZ_CP085478.1 Protein Homology CDS 152006 153178 . + 0 ID=cds-WP_002914339.1;Parent=gene-LI478_RS00755;Dbxref=Genbank:WP_002914339.1;Name=WP_002914339.1;gbkey=CDS;gene=emrA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228389.1;locus_tag=LI478_RS00755;product=multidrug efflux MFS transporter periplasmic adaptor subunit EmrA;protein_id=WP_002914339.1;transl_table=11 NZ_CP085478.1 RefSeq gene 153194 154732 . + . ID=gene-LI478_RS00760;Name=emrB;gbkey=Gene;gene=emrB;gene_biotype=protein_coding;locus_tag=LI478_RS00760 NZ_CP085478.1 Protein Homology CDS 153194 154732 . + 0 ID=cds-WP_032415421.1;Parent=gene-LI478_RS00760;Dbxref=Genbank:WP_032415421.1;Name=WP_032415421.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=emrB;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228390.1;locus_tag=LI478_RS00760;product=multidrug efflux MFS transporter permease subunit EmrB;protein_id=WP_032415421.1;transl_table=11 NZ_CP085478.1 RefSeq gene 154869 156539 . + . ID=gene-LI478_RS00765;Name=leuA;gbkey=Gene;gene=leuA;gene_biotype=protein_coding;locus_tag=LI478_RS00765 NZ_CP085478.1 Protein Homology CDS 154869 156539 . + 0 ID=cds-WP_064153089.1;Parent=gene-LI478_RS00765;Dbxref=Genbank:WP_064153089.1;Name=WP_064153089.1;Ontology_term=GO:0009098,GO:0003852;gbkey=CDS;gene=leuA;go_function=2-isopropylmalate synthase activity|0003852||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228391.1;locus_tag=LI478_RS00765;product=2-isopropylmalate synthase;protein_id=WP_064153089.1;transl_table=11 NZ_CP085478.1 RefSeq gene 156518 157285 . - . ID=gene-LI478_RS00770;Name=LI478_RS00770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00770 NZ_CP085478.1 Protein Homology CDS 156518 157285 . - 0 ID=cds-WP_004149452.1;Parent=gene-LI478_RS00770;Dbxref=Genbank:WP_004149452.1;Name=WP_004149452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228392.1;locus_tag=LI478_RS00770;product=helix-turn-helix transcriptional regulator;protein_id=WP_004149452.1;transl_table=11 NZ_CP085478.1 RefSeq gene 157338 157853 . - . ID=gene-LI478_RS00775;Name=luxS;gbkey=Gene;gene=luxS;gene_biotype=protein_coding;locus_tag=LI478_RS00775 NZ_CP085478.1 Protein Homology CDS 157338 157853 . - 0 ID=cds-WP_002914351.1;Parent=gene-LI478_RS00775;Dbxref=Genbank:WP_002914351.1;Name=WP_002914351.1;gbkey=CDS;gene=luxS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008458247.1;locus_tag=LI478_RS00775;product=S-ribosylhomocysteine lyase;protein_id=WP_002914351.1;transl_table=11 NZ_CP085478.1 RefSeq gene 158010 159566 . - . ID=gene-LI478_RS00780;Name=gshA;gbkey=Gene;gene=gshA;gene_biotype=protein_coding;locus_tag=LI478_RS00780 NZ_CP085478.1 Protein Homology CDS 158010 159566 . - 0 ID=cds-WP_002914353.1;Parent=gene-LI478_RS00780;Dbxref=Genbank:WP_002914353.1;Name=WP_002914353.1;Ontology_term=GO:0006750,GO:0004357;gbkey=CDS;gene=gshA;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228394.1;locus_tag=LI478_RS00780;product=glutamate--cysteine ligase;protein_id=WP_002914353.1;transl_table=11 NZ_CP085478.1 RefSeq gene 159633 160061 . - . ID=gene-LI478_RS00785;Name=LI478_RS00785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00785 NZ_CP085478.1 Protein Homology CDS 159633 160061 . - 0 ID=cds-WP_002914355.1;Parent=gene-LI478_RS00785;Dbxref=Genbank:WP_002914355.1;Name=WP_002914355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228395.1;locus_tag=LI478_RS00785;product=DedA family protein;protein_id=WP_002914355.1;transl_table=11 NZ_CP085478.1 RefSeq gene 160058 160624 . - . ID=gene-LI478_RS00790;Name=yqaB;gbkey=Gene;gene=yqaB;gene_biotype=protein_coding;locus_tag=LI478_RS00790 NZ_CP085478.1 Protein Homology CDS 160058 160624 . - 0 ID=cds-WP_004174701.1;Parent=gene-LI478_RS00790;Dbxref=Genbank:WP_004174701.1;Name=WP_004174701.1;gbkey=CDS;gene=yqaB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228396.1;locus_tag=LI478_RS00790;product=fructose-1-phosphate/6-phosphogluconate phosphatase;protein_id=WP_004174701.1;transl_table=11 NZ_CP085478.1 RefSeq gene 160750 161064 . - . ID=gene-LI478_RS00795;Name=LI478_RS00795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00795 NZ_CP085478.1 Protein Homology CDS 160750 161064 . - 0 ID=cds-WP_002914359.1;Parent=gene-LI478_RS00795;Dbxref=Genbank:WP_002914359.1;Name=WP_002914359.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228397.1;locus_tag=LI478_RS00795;product=BON domain-containing protein;protein_id=WP_002914359.1;transl_table=11 NZ_CP085478.1 RefSeq gene 161419 161495 . - . ID=gene-LI478_RS00800;Name=LI478_RS00800;gbkey=Gene;gene_biotype=tRNA;locus_tag=LI478_RS00800 NZ_CP085478.1 tRNAscan-SE tRNA 161419 161495 . - . ID=rna-LI478_RS00800;Parent=gene-LI478_RS00800;anticodon=(pos:complement(161459..161461));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS00800;product=tRNA-Arg NZ_CP085478.1 tRNAscan-SE exon 161419 161495 . - . ID=exon-LI478_RS00800-1;Parent=rna-LI478_RS00800;anticodon=(pos:complement(161459..161461));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS00800;product=tRNA-Arg NZ_CP085478.1 RefSeq gene 161592 161722 . - . ID=gene-LI478_RS00805;Name=LI478_RS00805;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LI478_RS00805 NZ_CP085478.1 cmsearch ncRNA 161592 161722 . - . ID=rna-LI478_RS00805;Parent=gene-LI478_RS00805;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LI478_RS00805;product=RtT sRNA NZ_CP085478.1 cmsearch exon 161592 161722 . - . ID=exon-LI478_RS00805-1;Parent=rna-LI478_RS00805;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LI478_RS00805;product=RtT sRNA NZ_CP085478.1 RefSeq gene 161724 161800 . - . ID=gene-LI478_RS00810;Name=LI478_RS00810;gbkey=Gene;gene_biotype=tRNA;locus_tag=LI478_RS00810 NZ_CP085478.1 tRNAscan-SE tRNA 161724 161800 . - . ID=rna-LI478_RS00810;Parent=gene-LI478_RS00810;anticodon=(pos:complement(161764..161766));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS00810;product=tRNA-Arg NZ_CP085478.1 tRNAscan-SE exon 161724 161800 . - . ID=exon-LI478_RS00810-1;Parent=rna-LI478_RS00810;anticodon=(pos:complement(161764..161766));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS00810;product=tRNA-Arg NZ_CP085478.1 RefSeq gene 161862 161938 . - . ID=gene-LI478_RS00815;Name=LI478_RS00815;gbkey=Gene;gene_biotype=tRNA;locus_tag=LI478_RS00815 NZ_CP085478.1 tRNAscan-SE tRNA 161862 161938 . - . ID=rna-LI478_RS00815;Parent=gene-LI478_RS00815;anticodon=(pos:complement(161902..161904));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS00815;product=tRNA-Arg NZ_CP085478.1 tRNAscan-SE exon 161862 161938 . - . ID=exon-LI478_RS00815-1;Parent=rna-LI478_RS00815;anticodon=(pos:complement(161902..161904));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS00815;product=tRNA-Arg NZ_CP085478.1 RefSeq gene 162089 162165 . - . ID=gene-LI478_RS00820;Name=LI478_RS00820;gbkey=Gene;gene_biotype=tRNA;locus_tag=LI478_RS00820 NZ_CP085478.1 tRNAscan-SE tRNA 162089 162165 . - . ID=rna-LI478_RS00820;Parent=gene-LI478_RS00820;anticodon=(pos:complement(162129..162131));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS00820;product=tRNA-Arg NZ_CP085478.1 tRNAscan-SE exon 162089 162165 . - . ID=exon-LI478_RS00820-1;Parent=rna-LI478_RS00820;anticodon=(pos:complement(162129..162131));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS00820;product=tRNA-Arg NZ_CP085478.1 RefSeq gene 162170 162262 . - . ID=gene-LI478_RS00825;Name=LI478_RS00825;gbkey=Gene;gene_biotype=tRNA;locus_tag=LI478_RS00825 NZ_CP085478.1 tRNAscan-SE tRNA 162170 162262 . - . ID=rna-LI478_RS00825;Parent=gene-LI478_RS00825;anticodon=(pos:complement(162226..162228));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS00825;product=tRNA-Ser NZ_CP085478.1 tRNAscan-SE exon 162170 162262 . - . ID=exon-LI478_RS00825-1;Parent=rna-LI478_RS00825;anticodon=(pos:complement(162226..162228));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS00825;product=tRNA-Ser NZ_CP085478.1 RefSeq gene 162585 162770 . - . ID=gene-LI478_RS00830;Name=csrA;gbkey=Gene;gene=csrA;gene_biotype=protein_coding;locus_tag=LI478_RS00830 NZ_CP085478.1 Protein Homology CDS 162585 162770 . - 0 ID=cds-WP_000906486.1;Parent=gene-LI478_RS00830;Dbxref=Genbank:WP_000906486.1;Name=WP_000906486.1;gbkey=CDS;gene=csrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001774971.1;locus_tag=LI478_RS00830;product=carbon storage regulator CsrA;protein_id=WP_000906486.1;transl_table=11 NZ_CP085478.1 RefSeq gene 163134 165761 . - . ID=gene-LI478_RS00835;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=LI478_RS00835 NZ_CP085478.1 Protein Homology CDS 163134 165761 . - 0 ID=cds-WP_004174700.1;Parent=gene-LI478_RS00835;Dbxref=Genbank:WP_004174700.1;Name=WP_004174700.1;Ontology_term=GO:0006419,GO:0004813,GO:0005737;gbkey=CDS;gene=alaS;go_component=cytoplasm|0005737||IEA;go_function=alanine-tRNA ligase activity|0004813||IEA;go_process=alanyl-tRNA aminoacylation|0006419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228400.1;locus_tag=LI478_RS00835;product=alanine--tRNA ligase;protein_id=WP_004174700.1;transl_table=11 NZ_CP085478.1 RefSeq gene 166012 166512 . - . ID=gene-LI478_RS00840;Name=recX;gbkey=Gene;gene=recX;gene_biotype=protein_coding;locus_tag=LI478_RS00840 NZ_CP085478.1 Protein Homology CDS 166012 166512 . - 0 ID=cds-WP_002914767.1;Parent=gene-LI478_RS00840;Dbxref=Genbank:WP_002914767.1;Name=WP_002914767.1;gbkey=CDS;gene=recX;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228401.1;locus_tag=LI478_RS00840;product=recombination regulator RecX;protein_id=WP_002914767.1;transl_table=11 NZ_CP085478.1 RefSeq gene 166580 167638 . - . ID=gene-LI478_RS00845;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=LI478_RS00845 NZ_CP085478.1 Protein Homology CDS 166580 167638 . - 0 ID=cds-WP_002914769.1;Parent=gene-LI478_RS00845;Dbxref=Genbank:WP_002914769.1;Name=WP_002914769.1;Ontology_term=GO:0006281,GO:0006310,GO:0009432,GO:0003677,GO:0008094,GO:0005737;gbkey=CDS;gene=recA;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,ATP-dependent activity%2C acting on DNA|0008094||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA,SOS response|0009432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228402.1;locus_tag=LI478_RS00845;product=recombinase RecA;protein_id=WP_002914769.1;transl_table=11 NZ_CP085478.1 RefSeq gene 167729 168226 . - . ID=gene-LI478_RS00850;Name=pncC;gbkey=Gene;gene=pncC;gene_biotype=protein_coding;locus_tag=LI478_RS00850 NZ_CP085478.1 Protein Homology CDS 167729 168226 . - 0 ID=cds-WP_002914771.1;Parent=gene-LI478_RS00850;Dbxref=Genbank:WP_002914771.1;Name=WP_002914771.1;gbkey=CDS;gene=pncC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228403.1;locus_tag=LI478_RS00850;product=nicotinamide-nucleotide amidase;protein_id=WP_002914771.1;transl_table=11 NZ_CP085478.1 RefSeq gene 168366 169244 . - . ID=gene-LI478_RS00855;Name=LI478_RS00855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00855 NZ_CP085478.1 Protein Homology CDS 168366 169244 . - 0 ID=cds-WP_023286807.1;Parent=gene-LI478_RS00855;Dbxref=Genbank:WP_023286807.1;Name=WP_023286807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228404.1;locus_tag=LI478_RS00855;product=metal ABC transporter substrate-binding protein;protein_id=WP_023286807.1;transl_table=11 NZ_CP085478.1 RefSeq gene 169252 170115 . - . ID=gene-LI478_RS00860;Name=LI478_RS00860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00860 NZ_CP085478.1 Protein Homology CDS 169252 170115 . - 0 ID=cds-WP_004149458.1;Parent=gene-LI478_RS00860;Dbxref=Genbank:WP_004149458.1;Name=WP_004149458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228405.1;locus_tag=LI478_RS00860;product=metal ABC transporter permease;protein_id=WP_004149458.1;transl_table=11 NZ_CP085478.1 RefSeq gene 170112 170822 . - . ID=gene-LI478_RS00865;Name=LI478_RS00865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00865 NZ_CP085478.1 Protein Homology CDS 170112 170822 . - 0 ID=cds-WP_015958867.1;Parent=gene-LI478_RS00865;Dbxref=Genbank:WP_015958867.1;Name=WP_015958867.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228406.1;locus_tag=LI478_RS00865;product=ATP-binding cassette domain-containing protein;protein_id=WP_015958867.1;transl_table=11 NZ_CP085478.1 RefSeq gene 171162 172241 . - . ID=gene-LI478_RS00870;Name=mltB;gbkey=Gene;gene=mltB;gene_biotype=protein_coding;locus_tag=LI478_RS00870 NZ_CP085478.1 Protein Homology CDS 171162 172241 . - 0 ID=cds-WP_004174694.1;Parent=gene-LI478_RS00870;Dbxref=Genbank:WP_004174694.1;Name=WP_004174694.1;gbkey=CDS;gene=mltB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228407.1;locus_tag=LI478_RS00870;product=lytic murein transglycosylase B;protein_id=WP_004174694.1;transl_table=11 NZ_CP085478.1 RefSeq gene 172518 173081 . + . ID=gene-LI478_RS00875;Name=LI478_RS00875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00875 NZ_CP085478.1 Protein Homology CDS 172518 173081 . + 0 ID=cds-WP_002914812.1;Parent=gene-LI478_RS00875;Dbxref=Genbank:WP_002914812.1;Name=WP_002914812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228408.1;locus_tag=LI478_RS00875;product=PTS glucitol/sorbitol transporter subunit IIC;protein_id=WP_002914812.1;transl_table=11 NZ_CP085478.1 RefSeq gene 173078 174058 . + . ID=gene-LI478_RS00880;Name=LI478_RS00880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00880 NZ_CP085478.1 Protein Homology CDS 173078 174058 . + 0 ID=cds-WP_004149462.1;Parent=gene-LI478_RS00880;Dbxref=Genbank:WP_004149462.1;Name=WP_004149462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228409.1;locus_tag=LI478_RS00880;product=PTS glucitol/sorbitol transporter subunit IIB;protein_id=WP_004149462.1;transl_table=11 NZ_CP085478.1 RefSeq gene 174072 174434 . + . ID=gene-LI478_RS00885;Name=srlB;gbkey=Gene;gene=srlB;gene_biotype=protein_coding;gene_synonym=gutB;locus_tag=LI478_RS00885 NZ_CP085478.1 Protein Homology CDS 174072 174434 . + 0 ID=cds-WP_004174693.1;Parent=gene-LI478_RS00885;Dbxref=Genbank:WP_004174693.1;Name=WP_004174693.1;gbkey=CDS;gene=srlB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228410.1;locus_tag=LI478_RS00885;product=PTS glucitol/sorbitol transporter subunit IIA;protein_id=WP_004174693.1;transl_table=11 NZ_CP085478.1 RefSeq gene 174447 175226 . + . ID=gene-LI478_RS00890;Name=srlD;gbkey=Gene;gene=srlD;gene_biotype=protein_coding;locus_tag=LI478_RS00890 NZ_CP085478.1 Protein Homology CDS 174447 175226 . + 0 ID=cds-WP_002914815.1;Parent=gene-LI478_RS00890;Dbxref=Genbank:WP_002914815.1;Name=WP_002914815.1;Ontology_term=GO:0016491;gbkey=CDS;gene=srlD;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228411.1;locus_tag=LI478_RS00890;product=sorbitol-6-phosphate dehydrogenase;protein_id=WP_002914815.1;transl_table=11 NZ_CP085478.1 RefSeq gene 175384 175743 . + . ID=gene-LI478_RS00895;Name=gutM;gbkey=Gene;gene=gutM;gene_biotype=protein_coding;locus_tag=LI478_RS00895 NZ_CP085478.1 Protein Homology CDS 175384 175743 . + 0 ID=cds-WP_004145754.1;Parent=gene-LI478_RS00895;Dbxref=Genbank:WP_004145754.1;Name=WP_004145754.1;gbkey=CDS;gene=gutM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228412.1;locus_tag=LI478_RS00895;product=transcriptional regulator GutM;protein_id=WP_004145754.1;transl_table=11 NZ_CP085478.1 RefSeq gene 175810 176583 . + . ID=gene-LI478_RS00900;Name=LI478_RS00900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00900 NZ_CP085478.1 Protein Homology CDS 175810 176583 . + 0 ID=cds-WP_002914817.1;Parent=gene-LI478_RS00900;Dbxref=Genbank:WP_002914817.1;Name=WP_002914817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228413.1;locus_tag=LI478_RS00900;product=DNA-binding transcriptional repressor;protein_id=WP_002914817.1;transl_table=11 NZ_CP085478.1 RefSeq gene 176576 177541 . + . ID=gene-LI478_RS00905;Name=gutQ;gbkey=Gene;gene=gutQ;gene_biotype=protein_coding;locus_tag=LI478_RS00905 NZ_CP085478.1 Protein Homology CDS 176576 177541 . + 0 ID=cds-WP_004174691.1;Parent=gene-LI478_RS00905;Dbxref=Genbank:WP_004174691.1;Name=WP_004174691.1;gbkey=CDS;gene=gutQ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228414.1;locus_tag=LI478_RS00905;product=arabinose-5-phosphate isomerase GutQ;protein_id=WP_004174691.1;transl_table=11 NZ_CP085478.1 RefSeq gene 177504 179054 . - . ID=gene-LI478_RS00910;Name=norR;gbkey=Gene;gene=norR;gene_biotype=protein_coding;locus_tag=LI478_RS00910 NZ_CP085478.1 Protein Homology CDS 177504 179054 . - 0 ID=cds-WP_004890240.1;Parent=gene-LI478_RS00910;Dbxref=Genbank:WP_004890240.1;Name=WP_004890240.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=norR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228415.1;locus_tag=LI478_RS00910;product=nitric oxide reductase transcriptional regulator NorR;protein_id=WP_004890240.1;transl_table=11 NZ_CP085478.1 RefSeq gene 179242 180690 . + . ID=gene-LI478_RS00915;Name=norV;gbkey=Gene;gene=norV;gene_biotype=protein_coding;locus_tag=LI478_RS00915 NZ_CP085478.1 Protein Homology CDS 179242 180690 . + 0 ID=cds-WP_227394164.1;Parent=gene-LI478_RS00915;Dbxref=Genbank:WP_227394164.1;Name=WP_227394164.1;Ontology_term=GO:0009055,GO:0010181,GO:0016966,GO:0046872;gbkey=CDS;gene=norV;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA,nitric oxide reductase activity|0016966||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228417.1;locus_tag=LI478_RS00915;product=anaerobic nitric oxide reductase flavorubredoxin;protein_id=WP_227394164.1;transl_table=11 NZ_CP085478.1 RefSeq gene 180687 181820 . + . ID=gene-LI478_RS00920;Name=norW;gbkey=Gene;gene=norW;gene_biotype=protein_coding;locus_tag=LI478_RS00920 NZ_CP085478.1 Protein Homology CDS 180687 181820 . + 0 ID=cds-WP_004890235.1;Parent=gene-LI478_RS00920;Dbxref=Genbank:WP_004890235.1;Name=WP_004890235.1;Ontology_term=GO:0016731;gbkey=CDS;gene=norW;go_function=oxidoreductase activity%2C acting on iron-sulfur proteins as donors%2C NAD or NADP as acceptor|0016731||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228418.1;locus_tag=LI478_RS00920;product=NADH:flavorubredoxin reductase NorW;protein_id=WP_004890235.1;transl_table=11 NZ_CP085478.1 RefSeq gene 181917 182930 . - . ID=gene-LI478_RS00925;Name=LI478_RS00925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00925 NZ_CP085478.1 Protein Homology CDS 181917 182930 . - 0 ID=cds-WP_004181028.1;Parent=gene-LI478_RS00925;Dbxref=Genbank:WP_004181028.1;Name=WP_004181028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228419.1;locus_tag=LI478_RS00925;product=HoxN/HupN/NixA family nickel/cobalt transporter;protein_id=WP_004181028.1;transl_table=11 NZ_CP085478.1 RefSeq gene 182927 185161 . - . ID=gene-LI478_RS00930;Name=hypF;gbkey=Gene;gene=hypF;gene_biotype=protein_coding;locus_tag=LI478_RS00930 NZ_CP085478.1 Protein Homology CDS 182927 185161 . - 0 ID=cds-WP_064153087.1;Parent=gene-LI478_RS00930;Dbxref=Genbank:WP_064153087.1;Name=WP_064153087.1;Ontology_term=GO:0036211,GO:0003998;gbkey=CDS;gene=hypF;go_function=acylphosphatase activity|0003998||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228420.1;locus_tag=LI478_RS00930;product=carbamoyltransferase HypF;protein_id=WP_064153087.1;transl_table=11 NZ_CP085478.1 RefSeq gene 185170 185697 . - . ID=gene-LI478_RS00935;Name=hydN;gbkey=Gene;gene=hydN;gene_biotype=protein_coding;locus_tag=LI478_RS00935 NZ_CP085478.1 Protein Homology CDS 185170 185697 . - 0 ID=cds-WP_002914875.1;Parent=gene-LI478_RS00935;Dbxref=Genbank:WP_002914875.1;Name=WP_002914875.1;gbkey=CDS;gene=hydN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228421.1;locus_tag=LI478_RS00935;product=electron transport protein HydN;protein_id=WP_002914875.1;transl_table=11 NZ_CP085478.1 RefSeq gene 185834 186847 . - . ID=gene-LI478_RS00940;Name=LI478_RS00940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00940 NZ_CP085478.1 Protein Homology CDS 185834 186847 . - 0 ID=cds-WP_032415424.1;Parent=gene-LI478_RS00940;Dbxref=Genbank:WP_032415424.1;Name=WP_032415424.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228422.1;locus_tag=LI478_RS00940;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_032415424.1;transl_table=11 NZ_CP085478.1 RefSeq gene 187114 188556 . + . ID=gene-LI478_RS00945;Name=ascF;gbkey=Gene;gene=ascF;gene_biotype=protein_coding;locus_tag=LI478_RS00945 NZ_CP085478.1 Protein Homology CDS 187114 188556 . + 0 ID=cds-WP_002914879.1;Parent=gene-LI478_RS00945;Dbxref=Genbank:WP_002914879.1;Name=WP_002914879.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;gene=ascF;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228424.1;locus_tag=LI478_RS00945;product=PTS cellobiose/arbutin/salicin transporter subunit IIBC;protein_id=WP_002914879.1;transl_table=11 NZ_CP085478.1 RefSeq gene 188583 190007 . + . ID=gene-LI478_RS00950;Name=LI478_RS00950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00950 NZ_CP085478.1 Protein Homology CDS 188583 190007 . + 0 ID=cds-WP_023286813.1;Parent=gene-LI478_RS00950;Dbxref=Genbank:WP_023286813.1;Name=WP_023286813.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228425.1;locus_tag=LI478_RS00950;product=6-phospho-beta-glucosidase;protein_id=WP_023286813.1;transl_table=11 NZ_CP085478.1 RefSeq gene 190189 190497 . + . ID=gene-LI478_RS00955;Name=LI478_RS00955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00955 NZ_CP085478.1 Protein Homology CDS 190189 190497 . + 0 ID=cds-WP_002914883.1;Parent=gene-LI478_RS00955;Dbxref=Genbank:WP_002914883.1;Name=WP_002914883.1;Ontology_term=GO:0016070,GO:0003723,GO:0016788,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228426.1;locus_tag=LI478_RS00955;product=SymE family type I addiction module toxin;protein_id=WP_002914883.1;transl_table=11 NZ_CP085478.1 RefSeq gene 190494 190964 . - . ID=gene-LI478_RS00960;Name=hycI;gbkey=Gene;gene=hycI;gene_biotype=protein_coding;locus_tag=LI478_RS00960 NZ_CP085478.1 Protein Homology CDS 190494 190964 . - 0 ID=cds-WP_004174683.1;Parent=gene-LI478_RS00960;Dbxref=Genbank:WP_004174683.1;Name=WP_004174683.1;Ontology_term=GO:0036211,GO:0004190;gbkey=CDS;gene=hycI;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228427.1;locus_tag=LI478_RS00960;product=hydrogenase maturation peptidase HycI;protein_id=WP_004174683.1;transl_table=11 NZ_CP085478.1 RefSeq gene 190957 191367 . - . ID=gene-LI478_RS00965;Name=LI478_RS00965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00965 NZ_CP085478.1 Protein Homology CDS 190957 191367 . - 0 ID=cds-WP_002914887.1;Parent=gene-LI478_RS00965;Dbxref=Genbank:WP_002914887.1;Name=WP_002914887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228428.1;locus_tag=LI478_RS00965;product=formate hydrogenlyase maturation HycH family protein;protein_id=WP_002914887.1;transl_table=11 NZ_CP085478.1 RefSeq gene 191364 192131 . - . ID=gene-LI478_RS00970;Name=LI478_RS00970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00970 NZ_CP085478.1 Protein Homology CDS 191364 192131 . - 0 ID=cds-WP_002914891.1;Parent=gene-LI478_RS00970;Dbxref=Genbank:WP_002914891.1;Name=WP_002914891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228429.1;locus_tag=LI478_RS00970;product=NADH-quinone oxidoreductase subunit B family protein;protein_id=WP_002914891.1;transl_table=11 NZ_CP085478.1 RefSeq gene 192131 192673 . - . ID=gene-LI478_RS00975;Name=LI478_RS00975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00975 NZ_CP085478.1 Protein Homology CDS 192131 192673 . - 0 ID=cds-WP_002914893.1;Parent=gene-LI478_RS00975;Dbxref=Genbank:WP_002914893.1;Name=WP_002914893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228430.1;locus_tag=LI478_RS00975;product=formate hydrogenlyase complex iron-sulfur subunit;protein_id=WP_002914893.1;transl_table=11 NZ_CP085478.1 RefSeq gene 192683 194392 . - . ID=gene-LI478_RS00980;Name=hycE;gbkey=Gene;gene=hycE;gene_biotype=protein_coding;locus_tag=LI478_RS00980 NZ_CP085478.1 Protein Homology CDS 192683 194392 . - 0 ID=cds-WP_004151044.1;Parent=gene-LI478_RS00980;Dbxref=Genbank:WP_004151044.1;Name=WP_004151044.1;gbkey=CDS;gene=hycE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130590.1;locus_tag=LI478_RS00980;product=formate hydrogenlyase subunit HycE;protein_id=WP_004151044.1;transl_table=11 NZ_CP085478.1 RefSeq gene 194409 195332 . - . ID=gene-LI478_RS00985;Name=LI478_RS00985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00985 NZ_CP085478.1 Protein Homology CDS 194409 195332 . - 0 ID=cds-WP_004149485.1;Parent=gene-LI478_RS00985;Dbxref=Genbank:WP_004149485.1;Name=WP_004149485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228432.1;locus_tag=LI478_RS00985;product=respiratory chain complex I subunit 1 family protein;protein_id=WP_004149485.1;transl_table=11 NZ_CP085478.1 RefSeq gene 195335 197161 . - . ID=gene-LI478_RS00990;Name=hycC;gbkey=Gene;gene=hycC;gene_biotype=protein_coding;locus_tag=LI478_RS00990 NZ_CP085478.1 Protein Homology CDS 195335 197161 . - 0 ID=cds-WP_064153086.1;Parent=gene-LI478_RS00990;Dbxref=Genbank:WP_064153086.1;Name=WP_064153086.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=hycC;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228433.1;locus_tag=LI478_RS00990;product=formate hydrogenlyase subunit 3;protein_id=WP_064153086.1;transl_table=11 NZ_CP085478.1 RefSeq gene 197158 197766 . - . ID=gene-LI478_RS00995;Name=LI478_RS00995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS00995 NZ_CP085478.1 Protein Homology CDS 197158 197766 . - 0 ID=cds-WP_004151047.1;Parent=gene-LI478_RS00995;Dbxref=Genbank:WP_004151047.1;Name=WP_004151047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228434.1;locus_tag=LI478_RS00995;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_004151047.1;transl_table=11 NZ_CP085478.1 RefSeq gene 197849 198298 . - . ID=gene-LI478_RS01000;Name=hycA;gbkey=Gene;gene=hycA;gene_biotype=protein_coding;locus_tag=LI478_RS01000 NZ_CP085478.1 Protein Homology CDS 197849 198298 . - 0 ID=cds-WP_002914925.1;Parent=gene-LI478_RS01000;Dbxref=Genbank:WP_002914925.1;Name=WP_002914925.1;gbkey=CDS;gene=hycA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228435.1;locus_tag=LI478_RS01000;product=formate hydrogenlyase regulator HycA;protein_id=WP_002914925.1;transl_table=11 NZ_CP085478.1 RefSeq gene 198508 198852 . + . ID=gene-LI478_RS01005;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=LI478_RS01005 NZ_CP085478.1 Protein Homology CDS 198508 198852 . + 0 ID=cds-WP_004145778.1;Parent=gene-LI478_RS01005;Dbxref=Genbank:WP_004145778.1;Name=WP_004145778.1;Ontology_term=GO:0036211,GO:0008901;gbkey=CDS;gene=hypA;go_function=ferredoxin hydrogenase activity|0008901||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228436.1;locus_tag=LI478_RS01005;product=hydrogenase maturation nickel metallochaperone HypA;protein_id=WP_004145778.1;transl_table=11 NZ_CP085478.1 RefSeq gene 198856 199728 . + . ID=gene-LI478_RS01010;Name=hypB;gbkey=Gene;gene=hypB;gene_biotype=protein_coding;locus_tag=LI478_RS01010 NZ_CP085478.1 Protein Homology CDS 198856 199728 . + 0 ID=cds-WP_004890205.1;Parent=gene-LI478_RS01010;Dbxref=Genbank:WP_004890205.1;Name=WP_004890205.1;Ontology_term=GO:0051604,GO:0003924,GO:0016151;gbkey=CDS;gene=hypB;go_function=GTPase activity|0003924||IEA,nickel cation binding|0016151||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311610.1;locus_tag=LI478_RS01010;product=hydrogenase nickel incorporation protein HypB;protein_id=WP_004890205.1;transl_table=11 NZ_CP085478.1 RefSeq gene 199719 199991 . + . ID=gene-LI478_RS01015;Name=LI478_RS01015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS01015 NZ_CP085478.1 Protein Homology CDS 199719 199991 . + 0 ID=cds-WP_002914934.1;Parent=gene-LI478_RS01015;Dbxref=Genbank:WP_002914934.1;Name=WP_002914934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228439.1;locus_tag=LI478_RS01015;product=HypC/HybG/HupF family hydrogenase formation chaperone;protein_id=WP_002914934.1;transl_table=11 NZ_CP085478.1 RefSeq gene 199991 201112 . + . ID=gene-LI478_RS01020;Name=hypD;gbkey=Gene;gene=hypD;gene_biotype=protein_coding;locus_tag=LI478_RS01020 NZ_CP085478.1 Protein Homology CDS 199991 201112 . + 0 ID=cds-WP_004900106.1;Parent=gene-LI478_RS01020;Dbxref=Genbank:WP_004900106.1;Name=WP_004900106.1;Ontology_term=GO:0036211,GO:0016530;gbkey=CDS;gene=hypD;go_function=metallochaperone activity|0016530||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228440.1;locus_tag=LI478_RS01020;product=hydrogenase formation protein HypD;protein_id=WP_004900106.1;transl_table=11 NZ_CP085478.1 RefSeq gene 201109 202119 . + . ID=gene-LI478_RS01025;Name=hypE;gbkey=Gene;gene=hypE;gene_biotype=protein_coding;locus_tag=LI478_RS01025 NZ_CP085478.1 Protein Homology CDS 201109 202119 . + 0 ID=cds-WP_004149493.1;Parent=gene-LI478_RS01025;Dbxref=Genbank:WP_004149493.1;Name=WP_004149493.1;gbkey=CDS;gene=hypE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228441.1;locus_tag=LI478_RS01025;product=hydrogenase expression/formation protein HypE;protein_id=WP_004149493.1;transl_table=11 NZ_CP085478.1 RefSeq gene 202356 204428 . + . ID=gene-LI478_RS01030;Name=flhA;gbkey=Gene;gene=flhA;gene_biotype=protein_coding;locus_tag=LI478_RS01030 NZ_CP085478.1 Protein Homology CDS 202356 204428 . + 0 ID=cds-WP_064153085.1;Parent=gene-LI478_RS01030;Dbxref=Genbank:WP_064153085.1;Name=WP_064153085.1;Ontology_term=GO:0006355,GO:0005515,GO:0005524,GO:0008134,GO:0043565;gbkey=CDS;gene=flhA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA,transcription factor binding|0008134||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004151050.1;locus_tag=LI478_RS01030;product=formate hydrogenlyase transcriptional activator FlhA;protein_id=WP_064153085.1;transl_table=11 NZ_CP085478.1 RefSeq gene 204482 205882 . - . ID=gene-LI478_RS01035;Name=LI478_RS01035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS01035 NZ_CP085478.1 Protein Homology CDS 204482 205882 . - 0 ID=cds-WP_004174676.1;Parent=gene-LI478_RS01035;Dbxref=Genbank:WP_004174676.1;Name=WP_004174676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228443.1;locus_tag=LI478_RS01035;product=glycoside hydrolase family 1 protein;protein_id=WP_004174676.1;transl_table=11 NZ_CP085478.1 RefSeq gene 205933 208125 . - . ID=gene-LI478_RS01040;Name=LI478_RS01040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS01040 NZ_CP085478.1 Protein Homology CDS 205933 208125 . - 0 ID=cds-WP_032415440.1;Parent=gene-LI478_RS01040;Dbxref=Genbank:WP_032415440.1;Name=WP_032415440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228444.1;locus_tag=LI478_RS01040;product=beta-1%2C4 mannanase;protein_id=WP_032415440.1;transl_table=11 NZ_CP085478.1 RefSeq gene 208138 209475 . - . ID=gene-LI478_RS01045;Name=LI478_RS01045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS01045 NZ_CP085478.1 Protein Homology CDS 208138 209475 . - 0 ID=cds-WP_002914972.1;Parent=gene-LI478_RS01045;Dbxref=Genbank:WP_002914972.1;Name=WP_002914972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228445.1;locus_tag=LI478_RS01045;product=carbohydrate porin;protein_id=WP_002914972.1;transl_table=11 NZ_CP085478.1 RefSeq gene 209738 211009 . - . ID=gene-LI478_RS01050;Name=LI478_RS01050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS01050 NZ_CP085478.1 Protein Homology CDS 209738 211009 . - 0 ID=cds-WP_004151052.1;Parent=gene-LI478_RS01050;Dbxref=Genbank:WP_004151052.1;Name=WP_004151052.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004900117.1;locus_tag=LI478_RS01050;product=PTS transporter subunit EIIC;protein_id=WP_004151052.1;transl_table=11 NZ_CP085478.1 RefSeq gene 211187 211501 . + . ID=gene-LI478_RS01055;Name=LI478_RS01055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS01055 NZ_CP085478.1 Protein Homology CDS 211187 211501 . + 0 ID=cds-WP_002914979.1;Parent=gene-LI478_RS01055;Dbxref=Genbank:WP_002914979.1;Name=WP_002914979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228448.1;locus_tag=LI478_RS01055;product=PTS sugar transporter subunit IIB;protein_id=WP_002914979.1;transl_table=11 NZ_CP085478.1 RefSeq gene 211511 212833 . + . ID=gene-LI478_RS01060;Name=LI478_RS01060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS01060 NZ_CP085478.1 Protein Homology CDS 211511 212833 . + 0 ID=cds-WP_004145789.1;Parent=gene-LI478_RS01060;Dbxref=Genbank:WP_004145789.1;Name=WP_004145789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228449.1;locus_tag=LI478_RS01060;product=PTS cellobiose transporter subunit IIC;protein_id=WP_004145789.1;transl_table=11 NZ_CP085478.1 RefSeq gene 212857 213171 . + . ID=gene-LI478_RS01065;Name=LI478_RS01065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS01065 NZ_CP085478.1 Protein Homology CDS 212857 213171 . + 0 ID=cds-WP_002914983.1;Parent=gene-LI478_RS01065;Dbxref=Genbank:WP_002914983.1;Name=WP_002914983.1;Ontology_term=GO:0009401;gbkey=CDS;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228450.1;locus_tag=LI478_RS01065;product=PTS lactose/cellobiose transporter subunit IIA;protein_id=WP_002914983.1;transl_table=11 NZ_CP085478.1 RefSeq gene 213222 214136 . + . ID=gene-LI478_RS01070;Name=LI478_RS01070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS01070 NZ_CP085478.1 Protein Homology CDS 213222 214136 . + 0 ID=cds-WP_023285492.1;Parent=gene-LI478_RS01070;Dbxref=Genbank:WP_023285492.1;Name=WP_023285492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228451.1;locus_tag=LI478_RS01070;product=ROK family protein;protein_id=WP_023285492.1;transl_table=11 NZ_CP085478.1 RefSeq gene 214193 215155 . + . ID=gene-LI478_RS01075;Name=LI478_RS01075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS01075 NZ_CP085478.1 Protein Homology CDS 214193 215155 . + 0 ID=cds-WP_002915031.1;Parent=gene-LI478_RS01075;Dbxref=Genbank:WP_002915031.1;Name=WP_002915031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002915031.1;locus_tag=LI478_RS01075;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_002915031.1;transl_table=11 NZ_CP085478.1 RefSeq gene 215334 216251 . + . ID=gene-LI478_RS01080;Name=LI478_RS01080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS01080 NZ_CP085478.1 Protein Homology CDS 215334 216251 . + 0 ID=cds-WP_004174672.1;Parent=gene-LI478_RS01080;Dbxref=Genbank:WP_004174672.1;Name=WP_004174672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228453.1;locus_tag=LI478_RS01080;product=metal ABC transporter substrate-binding protein;protein_id=WP_004174672.1;transl_table=11 NZ_CP085478.1 RefSeq gene 216248 217069 . + . ID=gene-LI478_RS01085;Name=LI478_RS01085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS01085 NZ_CP085478.1 Protein Homology CDS 216248 217069 . + 0 ID=cds-WP_064153084.1;Parent=gene-LI478_RS01085;Dbxref=Genbank:WP_064153084.1;Name=WP_064153084.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228454.1;locus_tag=LI478_RS01085;product=manganese/iron ABC transporter ATP-binding protein;protein_id=WP_064153084.1;transl_table=11 NZ_CP085478.1 RefSeq gene 217066 217914 . + . ID=gene-LI478_RS01090;Name=sitC;gbkey=Gene;gene=sitC;gene_biotype=protein_coding;locus_tag=LI478_RS01090 NZ_CP085478.1 Protein Homology CDS 217066 217914 . + 0 ID=cds-WP_064153083.1;Parent=gene-LI478_RS01090;Dbxref=Genbank:WP_064153083.1;Name=WP_064153083.1;gbkey=CDS;gene=sitC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228455.1;locus_tag=LI478_RS01090;product=iron/manganese ABC transporter permease subunit SitC;protein_id=WP_064153083.1;transl_table=11 NZ_CP085478.1 RefSeq gene 217908 218762 . + . ID=gene-LI478_RS01095;Name=LI478_RS01095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS01095 NZ_CP085478.1 Protein Homology CDS 217908 218762 . + 0 ID=cds-WP_064153082.1;Parent=gene-LI478_RS01095;Dbxref=Genbank:WP_064153082.1;Name=WP_064153082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228456.1;locus_tag=LI478_RS01095;product=metal ABC transporter permease;protein_id=WP_064153082.1;transl_table=11 NZ_CP085478.1 RefSeq gene 218829 219170 . - . ID=gene-LI478_RS01100;Name=LI478_RS01100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS01100 NZ_CP085478.1 Protein Homology CDS 218829 219170 . - 0 ID=cds-WP_074185251.1;Parent=gene-LI478_RS01100;Dbxref=Genbank:WP_074185251.1;Name=WP_074185251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228457.1;locus_tag=LI478_RS01100;product=nitrous oxide-stimulated promoter family protein;protein_id=WP_074185251.1;transl_table=11 NZ_CP085478.1 RefSeq gene 219237 220124 . - . ID=gene-LI478_RS01105;Name=LI478_RS01105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS01105 NZ_CP085478.1 Protein Homology CDS 219237 220124 . - 0 ID=cds-WP_004181063.1;Parent=gene-LI478_RS01105;Dbxref=Genbank:WP_004181063.1;Name=WP_004181063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228458.1;locus_tag=LI478_RS01105;product=LysR family transcriptional regulator;protein_id=WP_004181063.1;transl_table=11 NZ_CP085478.1 RefSeq gene 220309 221250 . + . ID=gene-LI478_RS01110;Name=LI478_RS01110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS01110 NZ_CP085478.1 Protein Homology CDS 220309 221250 . + 0 ID=cds-WP_064114828.1;Parent=gene-LI478_RS01110;Dbxref=Genbank:WP_064114828.1;Name=WP_064114828.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228459.1;locus_tag=LI478_RS01110;product=AEC family transporter;protein_id=WP_064114828.1;transl_table=11 NZ_CP085478.1 RefSeq gene 221286 222995 . + . ID=gene-LI478_RS01115;Name=LI478_RS01115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS01115 NZ_CP085478.1 Protein Homology CDS 221286 222995 . + 0 ID=cds-WP_004181065.1;Parent=gene-LI478_RS01115;Dbxref=Genbank:WP_004181065.1;Name=WP_004181065.1;Ontology_term=GO:0030976;gbkey=CDS;go_function=thiamine pyrophosphate binding|0030976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228460.1;locus_tag=LI478_RS01115;product=thiamine pyrophosphate-requiring protein;protein_id=WP_004181065.1;transl_table=11 NZ_CP085478.1 RefSeq gene 223035 223328 . - . ID=gene-LI478_RS01120;Name=LI478_RS01120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS01120 NZ_CP085478.1 Protein Homology CDS 223035 223328 . - 0 ID=cds-WP_032415447.1;Parent=gene-LI478_RS01120;Dbxref=Genbank:WP_032415447.1;Name=WP_032415447.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228461.1;locus_tag=LI478_RS01120;product=SelT/SelW/SelH family protein;protein_id=WP_032415447.1;transl_table=11 NZ_CP085478.1 RefSeq gene 223544 225907 . + . ID=gene-LI478_RS01125;Name=LI478_RS01125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS01125 NZ_CP085478.1 Protein Homology CDS 223544 225907 . + 0 ID=cds-WP_048332146.1;Parent=gene-LI478_RS01125;Dbxref=Genbank:WP_048332146.1;Name=WP_048332146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228462.1;locus_tag=LI478_RS01125;product=TonB-dependent receptor;protein_id=WP_048332146.1;transl_table=11 NZ_CP085478.1 RefSeq gene 225979 227010 . + . ID=gene-LI478_RS01130;Name=LI478_RS01130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS01130 NZ_CP085478.1 Protein Homology CDS 225979 227010 . + 0 ID=cds-WP_023328379.1;Parent=gene-LI478_RS01130;Dbxref=Genbank:WP_023328379.1;Name=WP_023328379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228463.1;locus_tag=LI478_RS01130;product=hemin-degrading factor;protein_id=WP_023328379.1;transl_table=11 NZ_CP085478.1 RefSeq gene 227007 227825 . + . ID=gene-LI478_RS01135;Name=LI478_RS01135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS01135 NZ_CP085478.1 Protein Homology CDS 227007 227825 . + 0 ID=cds-WP_032415449.1;Parent=gene-LI478_RS01135;Dbxref=Genbank:WP_032415449.1;Name=WP_032415449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228464.1;locus_tag=LI478_RS01135;product=ABC transporter substrate-binding protein;protein_id=WP_032415449.1;transl_table=11 NZ_CP085478.1 RefSeq gene 227825 228820 . + . ID=gene-LI478_RS01140;Name=LI478_RS01140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS01140 NZ_CP085478.1 Protein Homology CDS 227825 228820 . + 0 ID=cds-WP_004185411.1;Parent=gene-LI478_RS01140;Dbxref=Genbank:WP_004185411.1;Name=WP_004185411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228465.1;locus_tag=LI478_RS01140;product=iron ABC transporter permease;protein_id=WP_004185411.1;transl_table=11 NZ_CP085478.1 RefSeq gene 228813 229592 . + . ID=gene-LI478_RS01145;Name=LI478_RS01145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS01145 NZ_CP085478.1 Protein Homology CDS 228813 229592 . + 0 ID=cds-WP_004149516.1;Parent=gene-LI478_RS01145;Dbxref=Genbank:WP_004149516.1;Name=WP_004149516.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228466.1;locus_tag=LI478_RS01145;product=heme ABC transporter ATP-binding protein;protein_id=WP_004149516.1;transl_table=11 NZ_CP085478.1 RefSeq gene 229871 230353 . + . ID=gene-LI478_RS01150;Name=LI478_RS01150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS01150 NZ_CP085478.1 Protein Homology CDS 229871 230353 . + 0 ID=cds-WP_002915094.1;Parent=gene-LI478_RS01150;Dbxref=Genbank:WP_002915094.1;Name=WP_002915094.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228467.1;locus_tag=LI478_RS01150;product=Hcp family type VI secretion system effector;protein_id=WP_002915094.1;transl_table=11 NZ_CP085478.1 RefSeq gene 230365 230814 . + . ID=gene-LI478_RS01155;Name=LI478_RS01155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS01155 NZ_CP085478.1 Protein Homology CDS 230365 230814 . + 0 ID=cds-WP_004188736.1;Parent=gene-LI478_RS01155;Dbxref=Genbank:WP_004188736.1;Name=WP_004188736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461822.1;locus_tag=LI478_RS01155;product=hypothetical protein;protein_id=WP_004188736.1;transl_table=11 NZ_CP085478.1 RefSeq gene 230814 231146 . + . ID=gene-LI478_RS01160;Name=LI478_RS01160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS01160 NZ_CP085478.1 Protein Homology CDS 230814 231146 . + 0 ID=cds-WP_004181075.1;Parent=gene-LI478_RS01160;Dbxref=Genbank:WP_004181075.1;Name=WP_004181075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228468.1;locus_tag=LI478_RS01160;product=DUF1493 family protein;protein_id=WP_004181075.1;transl_table=11 NZ_CP085478.1 RefSeq gene 231415 233976 . + . ID=gene-LI478_RS01165;Name=mutS;gbkey=Gene;gene=mutS;gene_biotype=protein_coding;locus_tag=LI478_RS01165 NZ_CP085478.1 Protein Homology CDS 231415 233976 . + 0 ID=cds-WP_004151059.1;Parent=gene-LI478_RS01165;Dbxref=Genbank:WP_004151059.1;Name=WP_004151059.1;Ontology_term=GO:0006298,GO:0005524;gbkey=CDS;gene=mutS;go_function=ATP binding|0005524||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228469.1;locus_tag=LI478_RS01165;product=DNA mismatch repair protein MutS;protein_id=WP_004151059.1;transl_table=11 NZ_CP085478.1 RefSeq gene 234096 234248 . - . ID=gene-LI478_RS01170;Name=LI478_RS01170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS01170 NZ_CP085478.1 Protein Homology CDS 234096 234248 . - 0 ID=cds-WP_002915097.1;Parent=gene-LI478_RS01170;Dbxref=Genbank:WP_002915097.1;Name=WP_002915097.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228470.1;locus_tag=LI478_RS01170;product=Hok/Gef family protein;protein_id=WP_002915097.1;transl_table=11 NZ_CP085478.1 RefSeq gene 234587 234823 . - . ID=gene-LI478_RS01175;Name=LI478_RS01175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS01175 NZ_CP085478.1 Protein Homology CDS 234587 234823 . - 0 ID=cds-WP_002915098.1;Parent=gene-LI478_RS01175;Dbxref=Genbank:WP_002915098.1;Name=WP_002915098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228471.1;locus_tag=LI478_RS01175;product=non-oxidative hydroxyarylic acid decarboxylases subunit D;protein_id=WP_002915098.1;transl_table=11 NZ_CP085478.1 RefSeq gene 234834 236261 . - . ID=gene-LI478_RS01180;Name=LI478_RS01180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS01180 NZ_CP085478.1 Protein Homology CDS 234834 236261 . - 0 ID=cds-WP_004151060.1;Parent=gene-LI478_RS01180;Dbxref=Genbank:WP_004151060.1;Name=WP_004151060.1;Ontology_term=GO:0016831;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228472.1;locus_tag=LI478_RS01180;product=non-oxidative hydroxyarylic acid decarboxylases subunit C;protein_id=WP_004151060.1;transl_table=11 NZ_CP085478.1 RefSeq gene 236261 236854 . - . ID=gene-LI478_RS01185;Name=LI478_RS01185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS01185 NZ_CP085478.1 Protein Homology CDS 236261 236854 . - 0 ID=cds-WP_064153081.1;Parent=gene-LI478_RS01185;Dbxref=Genbank:WP_064153081.1;Name=WP_064153081.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228473.1;locus_tag=LI478_RS01185;product=non-oxidative hydroxyarylic acid decarboxylases subunit B;protein_id=WP_064153081.1;transl_table=11 NZ_CP085478.1 RefSeq gene 237028 237435 . + . ID=gene-LI478_RS01190;Name=LI478_RS01190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS01190 NZ_CP085478.1 Protein Homology CDS 237028 237435 . + 0 ID=cds-WP_002915102.1;Parent=gene-LI478_RS01190;Dbxref=Genbank:WP_002915102.1;Name=WP_002915102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008806213.1;locus_tag=LI478_RS01190;product=MarR family transcriptional regulator;protein_id=WP_002915102.1;transl_table=11 NZ_CP085478.1 RefSeq gene 237444 238331 . - . ID=gene-LI478_RS01195;Name=LI478_RS01195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS01195 NZ_CP085478.1 Protein Homology CDS 237444 238331 . - 0 ID=cds-WP_004151061.1;Parent=gene-LI478_RS01195;Dbxref=Genbank:WP_004151061.1;Name=WP_004151061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228475.1;locus_tag=LI478_RS01195;product=LysR family transcriptional regulator;protein_id=WP_004151061.1;transl_table=11 NZ_CP085478.1 RefSeq gene 238440 239642 . + . ID=gene-LI478_RS01200;Name=LI478_RS01200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS01200 NZ_CP085478.1 Protein Homology CDS 238440 239642 . + 0 ID=cds-WP_004210571.1;Parent=gene-LI478_RS01200;Dbxref=Genbank:WP_004210571.1;Name=WP_004210571.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228476.1;locus_tag=LI478_RS01200;product=MFS transporter;protein_id=WP_004210571.1;transl_table=11 NZ_CP085478.1 RefSeq gene 239639 240016 . + . ID=gene-LI478_RS01205;Name=LI478_RS01205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS01205 NZ_CP085478.1 Protein Homology CDS 239639 240016 . + 0 ID=cds-WP_004900191.1;Parent=gene-LI478_RS01205;Dbxref=Genbank:WP_004900191.1;Name=WP_004900191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228477.1;locus_tag=LI478_RS01205;product=hypothetical protein;protein_id=WP_004900191.1;transl_table=11 NZ_CP085478.1 RefSeq gene 240069 241061 . - . ID=gene-LI478_RS01210;Name=rpoS;gbkey=Gene;gene=rpoS;gene_biotype=protein_coding;locus_tag=LI478_RS01210 NZ_CP085478.1 Protein Homology CDS 240069 241061 . - 0 ID=cds-WP_002915106.1;Parent=gene-LI478_RS01210;Dbxref=Genbank:WP_002915106.1;Name=WP_002915106.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000081498.1;locus_tag=LI478_RS01210;product=RNA polymerase sigma factor RpoS;protein_id=WP_002915106.1;transl_table=11 NZ_CP085478.1 RefSeq gene 241219 242355 . - . ID=gene-LI478_RS01215;Name=nlpD;gbkey=Gene;gene=nlpD;gene_biotype=protein_coding;locus_tag=LI478_RS01215 NZ_CP085478.1 Protein Homology CDS 241219 242355 . - 0 ID=cds-WP_032415453.1;Parent=gene-LI478_RS01215;Dbxref=Genbank:WP_032415453.1;Name=WP_032415453.1;gbkey=CDS;gene=nlpD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228479.1;locus_tag=LI478_RS01215;product=murein hydrolase activator NlpD;protein_id=WP_032415453.1;transl_table=11 NZ_CP085478.1 RefSeq gene 242481 243107 . - . ID=gene-LI478_RS01220;Name=LI478_RS01220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS01220 NZ_CP085478.1 Protein Homology CDS 242481 243107 . - 0 ID=cds-WP_002915108.1;Parent=gene-LI478_RS01220;Dbxref=Genbank:WP_002915108.1;Name=WP_002915108.1;Ontology_term=GO:0036211,GO:0004719;gbkey=CDS;go_function=protein-L-isoaspartate (D-aspartate) O-methyltransferase activity|0004719||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130872.1;locus_tag=LI478_RS01220;product=protein-L-isoaspartate(D-aspartate) O-methyltransferase;protein_id=WP_002915108.1;transl_table=11 NZ_CP085478.1 RefSeq gene 243101 243862 . - . ID=gene-LI478_RS01225;Name=surE;gbkey=Gene;gene=surE;gene_biotype=protein_coding;locus_tag=LI478_RS01225 NZ_CP085478.1 Protein Homology CDS 243101 243862 . - 0 ID=cds-WP_004174648.1;Parent=gene-LI478_RS01225;Dbxref=Genbank:WP_004174648.1;Name=WP_004174648.1;Ontology_term=GO:0008252;gbkey=CDS;gene=surE;go_function=nucleotidase activity|0008252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228481.1;locus_tag=LI478_RS01225;product=5'/3'-nucleotidase SurE;protein_id=WP_004174648.1;transl_table=11 NZ_CP085478.1 RefSeq gene 243843 244892 . - . ID=gene-LI478_RS01230;Name=truD;gbkey=Gene;gene=truD;gene_biotype=protein_coding;locus_tag=LI478_RS01230 NZ_CP085478.1 Protein Homology CDS 243843 244892 . - 0 ID=cds-WP_004174647.1;Parent=gene-LI478_RS01230;Dbxref=Genbank:WP_004174647.1;Name=WP_004174647.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=truD;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228482.1;locus_tag=LI478_RS01230;product=tRNA pseudouridine(13) synthase TruD;protein_id=WP_004174647.1;transl_table=11 NZ_CP085478.1 RefSeq gene 244889 245368 . - . ID=gene-LI478_RS01235;Name=ispF;gbkey=Gene;gene=ispF;gene_biotype=protein_coding;locus_tag=LI478_RS01235 NZ_CP085478.1 Protein Homology CDS 244889 245368 . - 0 ID=cds-WP_002915113.1;Parent=gene-LI478_RS01235;Dbxref=Genbank:WP_002915113.1;Name=WP_002915113.1;Ontology_term=GO:0019288,GO:0008685;gbkey=CDS;gene=ispF;go_function=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase activity|0008685||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228483.1;locus_tag=LI478_RS01235;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=WP_002915113.1;transl_table=11 NZ_CP085478.1 RefSeq gene 245368 246078 . - . ID=gene-LI478_RS01240;Name=ispD;gbkey=Gene;gene=ispD;gene_biotype=protein_coding;locus_tag=LI478_RS01240 NZ_CP085478.1 Protein Homology CDS 245368 246078 . - 0 ID=cds-WP_004174645.1;Parent=gene-LI478_RS01240;Dbxref=Genbank:WP_004174645.1;Name=WP_004174645.1;Ontology_term=GO:0019288,GO:0050518;gbkey=CDS;gene=ispD;go_function=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity|0050518||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228484.1;locus_tag=LI478_RS01240;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=WP_004174645.1;transl_table=11 NZ_CP085478.1 RefSeq gene 246098 246415 . - . ID=gene-LI478_RS01245;Name=ftsB;gbkey=Gene;gene=ftsB;gene_biotype=protein_coding;locus_tag=LI478_RS01245 NZ_CP085478.1 Protein Homology CDS 246098 246415 . - 0 ID=cds-WP_002915156.1;Parent=gene-LI478_RS01245;Dbxref=Genbank:WP_002915156.1;Name=WP_002915156.1;gbkey=CDS;gene=ftsB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228485.1;locus_tag=LI478_RS01245;product=cell division protein FtsB;protein_id=WP_002915156.1;transl_table=11 NZ_CP085478.1 RefSeq gene 246556 246882 . - . ID=gene-LI478_RS01250;Name=LI478_RS01250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS01250 NZ_CP085478.1 Protein Homology CDS 246556 246882 . - 0 ID=cds-WP_002915157.1;Parent=gene-LI478_RS01250;Dbxref=Genbank:WP_002915157.1;Name=WP_002915157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228486.1;locus_tag=LI478_RS01250;product=DUF3561 family protein;protein_id=WP_002915157.1;transl_table=11 NZ_CP085478.1 RefSeq gene 246933 247538 . - . ID=gene-LI478_RS01255;Name=cysC;gbkey=Gene;gene=cysC;gene_biotype=protein_coding;locus_tag=LI478_RS01255 NZ_CP085478.1 Protein Homology CDS 246933 247538 . - 0 ID=cds-WP_227394165.1;Parent=gene-LI478_RS01255;Dbxref=Genbank:WP_227394165.1;Name=WP_227394165.1;Ontology_term=GO:0006790,GO:0004020;gbkey=CDS;gene=cysC;go_function=adenylylsulfate kinase activity|0004020||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228487.1;locus_tag=LI478_RS01255;product=adenylyl-sulfate kinase;protein_id=WP_227394165.1;transl_table=11 NZ_CP085478.1 RefSeq gene 247538 248965 . - . ID=gene-LI478_RS01260;Name=cysN;gbkey=Gene;gene=cysN;gene_biotype=protein_coding;locus_tag=LI478_RS01260 NZ_CP085478.1 Protein Homology CDS 247538 248965 . - 0 ID=cds-WP_014907017.1;Parent=gene-LI478_RS01260;Dbxref=Genbank:WP_014907017.1;Name=WP_014907017.1;Ontology_term=GO:0006790,GO:0003924,GO:0005525;gbkey=CDS;gene=cysN;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228488.1;locus_tag=LI478_RS01260;product=sulfate adenylyltransferase subunit CysN;protein_id=WP_014907017.1;transl_table=11 NZ_CP085478.1 RefSeq gene 248975 249883 . - . ID=gene-LI478_RS01265;Name=cysD;gbkey=Gene;gene=cysD;gene_biotype=protein_coding;locus_tag=LI478_RS01265 NZ_CP085478.1 Protein Homology CDS 248975 249883 . - 0 ID=cds-WP_002915160.1;Parent=gene-LI478_RS01265;Dbxref=Genbank:WP_002915160.1;Name=WP_002915160.1;Ontology_term=GO:0019419,GO:0004781;gbkey=CDS;gene=cysD;go_function=sulfate adenylyltransferase (ATP) activity|0004781||IEA;go_process=sulfate reduction|0019419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130891.1;locus_tag=LI478_RS01265;product=sulfate adenylyltransferase subunit CysD;protein_id=WP_002915160.1;transl_table=11 NZ_CP085478.1 RefSeq gene 249893 251299 . - . ID=gene-LI478_RS01270;Name=cysG;gbkey=Gene;gene=cysG;gene_biotype=protein_coding;locus_tag=LI478_RS01270 NZ_CP085478.1 Protein Homology CDS 249893 251299 . - 0 ID=cds-WP_072198726.1;Parent=gene-LI478_RS01270;Dbxref=Genbank:WP_072198726.1;Name=WP_072198726.1;Ontology_term=GO:0019354,GO:0004851,GO:0043115,GO:0051266,GO:0051287;gbkey=CDS;gene=cysG;go_function=uroporphyrin-III C-methyltransferase activity|0004851||IEA,precorrin-2 dehydrogenase activity|0043115||IEA,sirohydrochlorin ferrochelatase activity|0051266||IEA,NAD binding|0051287||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228490.1;locus_tag=LI478_RS01270;product=siroheme synthase CysG;protein_id=WP_072198726.1;transl_table=11 NZ_CP085478.1 RefSeq gene 251546 252592 . + . ID=gene-LI478_RS01275;Name=LI478_RS01275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS01275 NZ_CP085478.1 Protein Homology CDS 251546 252592 . + 0 ID=cds-WP_004174643.1;Parent=gene-LI478_RS01275;Dbxref=Genbank:WP_004174643.1;Name=WP_004174643.1;Ontology_term=GO:0008235;gbkey=CDS;go_function=metalloexopeptidase activity|0008235||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228491.1;locus_tag=LI478_RS01275;product=aminopeptidase;protein_id=WP_004174643.1;transl_table=11 NZ_CP085478.1 RefSeq gene 252665 253399 . - . ID=gene-LI478_RS01280;Name=cysH;gbkey=Gene;gene=cysH;gene_biotype=protein_coding;locus_tag=LI478_RS01280 NZ_CP085478.1 Protein Homology CDS 252665 253399 . - 0 ID=cds-WP_002915177.1;Parent=gene-LI478_RS01280;Dbxref=Genbank:WP_002915177.1;Name=WP_002915177.1;Ontology_term=GO:0019379,GO:0004604;gbkey=CDS;gene=cysH;go_function=phosphoadenylyl-sulfate reductase (thioredoxin) activity|0004604||IEA;go_process=sulfate assimilation%2C phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)|0019379||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228492.1;locus_tag=LI478_RS01280;product=phosphoadenosine phosphosulfate reductase;protein_id=WP_002915177.1;transl_table=11 NZ_CP085478.1 RefSeq gene 253498 255210 . - . ID=gene-LI478_RS01285;Name=cysI;gbkey=Gene;gene=cysI;gene_biotype=protein_coding;locus_tag=LI478_RS01285 NZ_CP085478.1 Protein Homology CDS 253498 255210 . - 0 ID=cds-WP_004142787.1;Parent=gene-LI478_RS01285;Dbxref=Genbank:WP_004142787.1;Name=WP_004142787.1;Ontology_term=GO:0000103,GO:0004783;gbkey=CDS;gene=cysI;go_function=sulfite reductase (NADPH) activity|0004783||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001290736.1;locus_tag=LI478_RS01285;product=assimilatory sulfite reductase (NADPH) hemoprotein subunit;protein_id=WP_004142787.1;transl_table=11 NZ_CP085478.1 RefSeq gene 255210 257009 . - . ID=gene-LI478_RS01290;Name=cysJ;gbkey=Gene;gene=cysJ;gene_biotype=protein_coding;locus_tag=LI478_RS01290 NZ_CP085478.1 Protein Homology CDS 255210 257009 . - 0 ID=cds-WP_004151065.1;Parent=gene-LI478_RS01290;Dbxref=Genbank:WP_004151065.1;Name=WP_004151065.1;Ontology_term=GO:0000103,GO:0019344,GO:0004783,GO:0010181,GO:0050660;gbkey=CDS;gene=cysJ;go_function=sulfite reductase (NADPH) activity|0004783||IEA,FMN binding|0010181||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=sulfate assimilation|0000103||IEA,cysteine biosynthetic process|0019344||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417244.1;locus_tag=LI478_RS01290;product=NADPH-dependent assimilatory sulfite reductase flavoprotein subunit;protein_id=WP_004151065.1;transl_table=11 NZ_CP085478.1 RefSeq gene 257326 257691 . + . ID=gene-LI478_RS01295;Name=queD;gbkey=Gene;gene=queD;gene_biotype=protein_coding;locus_tag=LI478_RS01295 NZ_CP085478.1 Protein Homology CDS 257326 257691 . + 0 ID=cds-WP_004174641.1;Parent=gene-LI478_RS01295;Dbxref=Genbank:WP_004174641.1;Name=WP_004174641.1;Ontology_term=GO:0008616,GO:0003824;gbkey=CDS;gene=queD;go_function=catalytic activity|0003824||IEA;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228496.1;locus_tag=LI478_RS01295;product=6-carboxytetrahydropterin synthase QueD;protein_id=WP_004174641.1;transl_table=11 NZ_CP085478.1 RefSeq gene 257733 258404 . - . ID=gene-LI478_RS01300;Name=queE;gbkey=Gene;gene=queE;gene_biotype=protein_coding;locus_tag=LI478_RS01300 NZ_CP085478.1 Protein Homology CDS 257733 258404 . - 0 ID=cds-WP_227394166.1;Parent=gene-LI478_RS01300;Dbxref=Genbank:WP_227394166.1;Name=WP_227394166.1;Ontology_term=GO:0006400,GO:0051539,GO:1904047;gbkey=CDS;gene=queE;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001199960.1;locus_tag=LI478_RS01300;product=7-carboxy-7-deazaguanine synthase QueE;protein_id=WP_227394166.1;transl_table=11 NZ_CP085478.1 RefSeq gene 258879 259988 . + . ID=gene-LI478_RS01305;Name=LI478_RS01305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS01305 NZ_CP085478.1 Protein Homology CDS 258879 259988 . + 0 ID=cds-WP_029497026.1;Parent=gene-LI478_RS01305;Dbxref=Genbank:WP_029497026.1;Name=WP_029497026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228499.1;locus_tag=LI478_RS01305;product=SDR family oxidoreductase;protein_id=WP_029497026.1;transl_table=11 NZ_CP085478.1 RefSeq gene 260053 261351 . - . ID=gene-LI478_RS01310;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=LI478_RS01310 NZ_CP085478.1 Protein Homology CDS 260053 261351 . - 0 ID=cds-WP_002915213.1;Parent=gene-LI478_RS01310;Dbxref=Genbank:WP_002915213.1;Name=WP_002915213.1;Ontology_term=GO:0006096,GO:0004634;gbkey=CDS;gene=eno;go_function=phosphopyruvate hydratase activity|0004634||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456663.1;locus_tag=LI478_RS01310;product=phosphopyruvate hydratase;protein_id=WP_002915213.1;transl_table=11 NZ_CP085478.1 RefSeq gene 261433 263070 . - . ID=gene-LI478_RS01315;Name=pyrG;gbkey=Gene;gene=pyrG;gene_biotype=protein_coding;locus_tag=LI478_RS01315 NZ_CP085478.1 Protein Homology CDS 261433 263070 . - 0 ID=cds-WP_004142808.1;Parent=gene-LI478_RS01315;Dbxref=Genbank:WP_004142808.1;Name=WP_004142808.1;Ontology_term=GO:0009220,GO:0003883;gbkey=CDS;gene=pyrG;go_function=CTP synthase activity|0003883||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130912.1;locus_tag=LI478_RS01315;product=CTP synthase (glutamine hydrolyzing);protein_id=WP_004142808.1;transl_table=11 NZ_CP085478.1 RefSeq gene 263351 264142 . - . ID=gene-LI478_RS01320;Name=mazG;gbkey=Gene;gene=mazG;gene_biotype=protein_coding;locus_tag=LI478_RS01320 NZ_CP085478.1 Protein Homology CDS 263351 264142 . - 0 ID=cds-WP_002915215.1;Parent=gene-LI478_RS01320;Dbxref=Genbank:WP_002915215.1;Name=WP_002915215.1;gbkey=CDS;gene=mazG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228502.1;locus_tag=LI478_RS01320;product=nucleoside triphosphate pyrophosphohydrolase;protein_id=WP_002915215.1;transl_table=11 NZ_CP085478.1 RefSeq gene 264254 266491 . - . ID=gene-LI478_RS01325;Name=relA;gbkey=Gene;gene=relA;gene_biotype=protein_coding;locus_tag=LI478_RS01325 NZ_CP085478.1 Protein Homology CDS 264254 266491 . - 0 ID=cds-WP_002915217.1;Parent=gene-LI478_RS01325;Dbxref=Genbank:WP_002915217.1;Name=WP_002915217.1;Ontology_term=GO:0015969;gbkey=CDS;gene=relA;go_process=guanosine tetraphosphate metabolic process|0015969||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228503.1;locus_tag=LI478_RS01325;product=GTP diphosphokinase;protein_id=WP_002915217.1;transl_table=11 NZ_CP085478.1 RefSeq gene 266613 267917 . - . ID=gene-LI478_RS01330;Name=rlmD;gbkey=Gene;gene=rlmD;gene_biotype=protein_coding;locus_tag=LI478_RS01330 NZ_CP085478.1 Protein Homology CDS 266613 267917 . - 0 ID=cds-WP_032415455.1;Parent=gene-LI478_RS01330;Dbxref=Genbank:WP_032415455.1;Name=WP_032415455.1;Ontology_term=GO:0006396,GO:0008173;gbkey=CDS;gene=rlmD;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228504.1;locus_tag=LI478_RS01330;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;protein_id=WP_032415455.1;transl_table=11 NZ_CP085478.1 RefSeq gene 268031 270781 . + . ID=gene-LI478_RS01335;Name=barA;gbkey=Gene;gene=barA;gene_biotype=protein_coding;locus_tag=LI478_RS01335 NZ_CP085478.1 Protein Homology CDS 268031 270781 . + 0 ID=cds-WP_004151066.1;Parent=gene-LI478_RS01335;Dbxref=Genbank:WP_004151066.1;Name=WP_004151066.1;Ontology_term=GO:0000160,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=barA;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228505.1;locus_tag=LI478_RS01335;product=two-component sensor histidine kinase BarA;protein_id=WP_004151066.1;transl_table=11 NZ_CP085478.1 RefSeq gene 270939 272078 . - . ID=gene-LI478_RS01340;Name=LI478_RS01340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS01340 NZ_CP085478.1 Protein Homology CDS 270939 272078 . - 0 ID=cds-WP_002915222.1;Parent=gene-LI478_RS01340;Dbxref=Genbank:WP_002915222.1;Name=WP_002915222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228506.1;locus_tag=LI478_RS01340;product=glycerate kinase;protein_id=WP_002915222.1;transl_table=11 NZ_CP085478.1 RefSeq gene 272151 273491 . - . ID=gene-LI478_RS01345;Name=gudD;gbkey=Gene;gene=gudD;gene_biotype=protein_coding;locus_tag=LI478_RS01345 NZ_CP085478.1 Protein Homology CDS 272151 273491 . - 0 ID=cds-WP_002915223.1;Parent=gene-LI478_RS01345;Dbxref=Genbank:WP_002915223.1;Name=WP_002915223.1;Ontology_term=GO:0019394,GO:0000287,GO:0008872;gbkey=CDS;gene=gudD;go_function=magnesium ion binding|0000287||IEA,glucarate dehydratase activity|0008872||IEA;go_process=glucarate catabolic process|0019394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228507.1;locus_tag=LI478_RS01345;product=glucarate dehydratase;protein_id=WP_002915223.1;transl_table=11 NZ_CP085478.1 RefSeq gene 273509 274849 . - . ID=gene-LI478_RS01350;Name=LI478_RS01350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS01350 NZ_CP085478.1 Protein Homology CDS 273509 274849 . - 0 ID=cds-WP_004185436.1;Parent=gene-LI478_RS01350;Dbxref=Genbank:WP_004185436.1;Name=WP_004185436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228508.1;locus_tag=LI478_RS01350;product=glucarate dehydratase family protein;protein_id=WP_004185436.1;transl_table=11 NZ_CP085478.1 RefSeq gene 274852 276204 . - . ID=gene-LI478_RS01355;Name=LI478_RS01355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS01355 NZ_CP085478.1 Protein Homology CDS 274852 276204 . - 0 ID=cds-WP_002915225.1;Parent=gene-LI478_RS01355;Dbxref=Genbank:WP_002915225.1;Name=WP_002915225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228509.1;locus_tag=LI478_RS01355;product=MFS transporter;protein_id=WP_002915225.1;transl_table=11 NZ_CP085478.1 RefSeq gene 276676 277119 . - . ID=gene-LI478_RS01360;Name=LI478_RS01360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS01360 NZ_CP085478.1 Protein Homology CDS 276676 277119 . - 0 ID=cds-WP_002915235.1;Parent=gene-LI478_RS01360;Dbxref=Genbank:WP_002915235.1;Name=WP_002915235.1;Ontology_term=GO:0010181;gbkey=CDS;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228510.1;locus_tag=LI478_RS01360;product=flavodoxin;protein_id=WP_002915235.1;transl_table=11 NZ_CP085478.1 RefSeq gene 277124 277918 . - . ID=gene-LI478_RS01365;Name=truC;gbkey=Gene;gene=truC;gene_biotype=protein_coding;locus_tag=LI478_RS01365 NZ_CP085478.1 Protein Homology CDS 277124 277918 . - 0 ID=cds-WP_002915236.1;Parent=gene-LI478_RS01365;Dbxref=Genbank:WP_002915236.1;Name=WP_002915236.1;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;gene=truC;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228511.1;locus_tag=LI478_RS01365;product=tRNA pseudouridine(65) synthase TruC;protein_id=WP_002915236.1;transl_table=11 NZ_CP085478.1 RefSeq gene 277918 278247 . - . ID=gene-LI478_RS01370;Name=LI478_RS01370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS01370 NZ_CP085478.1 Protein Homology CDS 277918 278247 . - 0 ID=cds-WP_002915249.1;Parent=gene-LI478_RS01370;Dbxref=Genbank:WP_002915249.1;Name=WP_002915249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228512.1;locus_tag=LI478_RS01370;product=YqcC family protein;protein_id=WP_002915249.1;transl_table=11 NZ_CP085478.1 RefSeq gene 278879 279424 . - . ID=gene-LI478_RS01375;Name=syd;gbkey=Gene;gene=syd;gene_biotype=protein_coding;locus_tag=LI478_RS01375 NZ_CP085478.1 Protein Homology CDS 278879 279424 . - 0 ID=cds-WP_002915253.1;Parent=gene-LI478_RS01375;Dbxref=Genbank:WP_002915253.1;Name=WP_002915253.1;Ontology_term=GO:0009898;gbkey=CDS;gene=syd;go_component=cytoplasmic side of plasma membrane|0009898||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228513.1;locus_tag=LI478_RS01375;product=SecY-interacting protein;protein_id=WP_002915253.1;transl_table=11 NZ_CP085478.1 RefSeq gene 279493 280338 . + . ID=gene-LI478_RS01380;Name=queF;gbkey=Gene;gene=queF;gene_biotype=protein_coding;locus_tag=LI478_RS01380 NZ_CP085478.1 Protein Homology CDS 279493 280338 . + 0 ID=cds-WP_004174633.1;Parent=gene-LI478_RS01380;Dbxref=Genbank:WP_004174633.1;Name=WP_004174633.1;Note=Catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis;Ontology_term=GO:0008616,GO:0033739,GO:0043867;gbkey=CDS;gene=queF;go_function=preQ1 synthase activity|0033739||IEA,7-cyano-7-deazaguanine tRNA-ribosyltransferase activity|0043867||IEA;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228514.1;locus_tag=LI478_RS01380;product=NADPH-dependent 7-cyano-7-deazaguanine reductase QueF;protein_id=WP_004174633.1;transl_table=11 NZ_CP085478.1 RefSeq gene 280450 281817 . + . ID=gene-LI478_RS01385;Name=ppnN;gbkey=Gene;gene=ppnN;gene_biotype=protein_coding;locus_tag=LI478_RS01385 NZ_CP085478.1 Protein Homology CDS 280450 281817 . + 0 ID=cds-WP_002915258.1;Parent=gene-LI478_RS01385;Dbxref=Genbank:WP_002915258.1;Name=WP_002915258.1;gbkey=CDS;gene=ppnN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228515.1;locus_tag=LI478_RS01385;product=nucleotide 5'-monophosphate nucleosidase PpnN;protein_id=WP_002915258.1;transl_table=11 NZ_CP085478.1 RefSeq gene 282327 283616 . + . ID=gene-LI478_RS01390;Name=LI478_RS01390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS01390 NZ_CP085478.1 Protein Homology CDS 282327 283616 . + 0 ID=cds-WP_004151070.1;Parent=gene-LI478_RS01390;Dbxref=Genbank:WP_004151070.1;Name=WP_004151070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228516.1;locus_tag=LI478_RS01390;product=HAAAP family serine/threonine permease;protein_id=WP_004151070.1;transl_table=11 NZ_CP085478.1 RefSeq gene 283682 285049 . + . ID=gene-LI478_RS01395;Name=LI478_RS01395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS01395 NZ_CP085478.1 Protein Homology CDS 283682 285049 . + 0 ID=cds-WP_064153080.1;Parent=gene-LI478_RS01395;Dbxref=Genbank:WP_064153080.1;Name=WP_064153080.1;Ontology_term=GO:0009063,GO:0003941,GO:0051539;gbkey=CDS;go_function=L-serine ammonia-lyase activity|0003941||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=amino acid catabolic process|0009063||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228517.1;locus_tag=LI478_RS01395;product=L-serine ammonia-lyase;protein_id=WP_064153080.1;transl_table=11 NZ_CP085478.1 RefSeq gene 285188 286129 . + . ID=gene-LI478_RS01400;Name=LI478_RS01400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS01400 NZ_CP085478.1 Protein Homology CDS 285188 286129 . + 0 ID=cds-WP_049108758.1;Parent=gene-LI478_RS01400;Dbxref=Genbank:WP_049108758.1;Name=WP_049108758.1;Ontology_term=GO:0042626,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228518.1;locus_tag=LI478_RS01400;product=aliphatic sulfonate ABC transporter substrate-binding protein;protein_id=WP_049108758.1;transl_table=11 NZ_CP085478.1 RefSeq gene 286175 287398 . - . ID=gene-LI478_RS01405;Name=LI478_RS01405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS01405 NZ_CP085478.1 Protein Homology CDS 286175 287398 . - 0 ID=cds-WP_002915263.1;Parent=gene-LI478_RS01405;Dbxref=Genbank:WP_002915263.1;Name=WP_002915263.1;Ontology_term=GO:0016627,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228519.1;locus_tag=LI478_RS01405;product=acyl-CoA dehydrogenase family protein;protein_id=WP_002915263.1;transl_table=11 NZ_CP085478.1 RefSeq gene 287409 288830 . - . ID=gene-LI478_RS01410;Name=LI478_RS01410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS01410 NZ_CP085478.1 Protein Homology CDS 287409 288830 . - 0 ID=cds-WP_004900233.1;Parent=gene-LI478_RS01410;Dbxref=Genbank:WP_004900233.1;Name=WP_004900233.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228520.1;locus_tag=LI478_RS01410;product=MFS transporter;protein_id=WP_004900233.1;transl_table=11 NZ_CP085478.1 RefSeq gene 289024 289902 . - . ID=gene-LI478_RS01415;Name=LI478_RS01415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS01415 NZ_CP085478.1 Protein Homology CDS 289024 289902 . - 0 ID=cds-WP_002915265.1;Parent=gene-LI478_RS01415;Dbxref=Genbank:WP_002915265.1;Name=WP_002915265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228521.1;locus_tag=LI478_RS01415;product=MetQ/NlpA family ABC transporter substrate-binding protein;protein_id=WP_002915265.1;transl_table=11 NZ_CP085478.1 RefSeq gene 289899 290597 . - . ID=gene-LI478_RS01420;Name=LI478_RS01420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS01420 NZ_CP085478.1 Protein Homology CDS 289899 290597 . - 0 ID=cds-WP_002915267.1;Parent=gene-LI478_RS01420;Dbxref=Genbank:WP_002915267.1;Name=WP_002915267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228522.1;locus_tag=LI478_RS01420;product=ABC transporter permease;protein_id=WP_002915267.1;transl_table=11 NZ_CP085478.1 RefSeq gene 290594 291616 . - . ID=gene-LI478_RS01425;Name=LI478_RS01425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS01425 NZ_CP085478.1 Protein Homology CDS 290594 291616 . - 0 ID=cds-WP_004174621.1;Parent=gene-LI478_RS01425;Dbxref=Genbank:WP_004174621.1;Name=WP_004174621.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228523.1;locus_tag=LI478_RS01425;product=ATP-binding cassette domain-containing protein;protein_id=WP_004174621.1;transl_table=11 NZ_CP085478.1 RefSeq gene 291613 293019 . - . ID=gene-LI478_RS01430;Name=LI478_RS01430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS01430 NZ_CP085478.1 Protein Homology CDS 291613 293019 . - 0 ID=cds-WP_032428395.1;Parent=gene-LI478_RS01430;Dbxref=Genbank:WP_032428395.1;Name=WP_032428395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228524.1;locus_tag=LI478_RS01430;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_032428395.1;transl_table=11 NZ_CP085478.1 RefSeq gene 293093 294490 . - . ID=gene-LI478_RS01435;Name=LI478_RS01435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS01435 NZ_CP085478.1 Protein Homology CDS 293093 294490 . - 0 ID=cds-WP_032415461.1;Parent=gene-LI478_RS01435;Dbxref=Genbank:WP_032415461.1;Name=WP_032415461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228525.1;locus_tag=LI478_RS01435;product=FAD/NAD(P)-binding protein;protein_id=WP_032415461.1;transl_table=11 NZ_CP085478.1 RefSeq gene 294537 295709 . - . ID=gene-LI478_RS01440;Name=ssuD;gbkey=Gene;gene=ssuD;gene_biotype=protein_coding;locus_tag=LI478_RS01440 NZ_CP085478.1 Protein Homology CDS 294537 295709 . - 0 ID=cds-WP_004142863.1;Parent=gene-LI478_RS01440;Dbxref=Genbank:WP_004142863.1;Name=WP_004142863.1;Ontology_term=GO:0006790,GO:0008726,GO:0010181;gbkey=CDS;gene=ssuD;go_function=alkanesulfonate monooxygenase activity|0008726||IEA,FMN binding|0010181||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228526.1;locus_tag=LI478_RS01440;product=FMNH2-dependent alkanesulfonate monooxygenase;protein_id=WP_004142863.1;transl_table=11 NZ_CP085478.1 RefSeq gene 295787 295903 . - . ID=gene-LI478_RS01445;Name=LI478_RS01445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS01445 NZ_CP085478.1 Protein Homology CDS 295787 295903 . - 0 ID=cds-WP_004219275.1;Parent=gene-LI478_RS01445;Dbxref=Genbank:WP_004219275.1;Name=WP_004219275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228527.1;locus_tag=LI478_RS01445;product=hypothetical protein;protein_id=WP_004219275.1;transl_table=11 NZ_CP085478.1 RefSeq gene 295981 297924 . + . ID=gene-LI478_RS01450;Name=LI478_RS01450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS01450 NZ_CP085478.1 Protein Homology CDS 295981 297924 . + 0 ID=cds-WP_004174618.1;Parent=gene-LI478_RS01450;Dbxref=Genbank:WP_004174618.1;Name=WP_004174618.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228528.1;locus_tag=LI478_RS01450;product=sigma-54-dependent Fis family transcriptional regulator;protein_id=WP_004174618.1;transl_table=11 NZ_CP085478.1 RefSeq gene 298022 298777 . + . ID=gene-LI478_RS01455;Name=xni;gbkey=Gene;gene=xni;gene_biotype=protein_coding;locus_tag=LI478_RS01455 NZ_CP085478.1 Protein Homology CDS 298022 298777 . + 0 ID=cds-WP_004142871.1;Parent=gene-LI478_RS01455;Dbxref=Genbank:WP_004142871.1;Name=WP_004142871.1;Ontology_term=GO:0033567,GO:0003677,GO:0017108;gbkey=CDS;gene=xni;go_function=DNA binding|0003677||IEA,5'-flap endonuclease activity|0017108||IEA;go_process=DNA replication%2C Okazaki fragment processing|0033567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228529.1;locus_tag=LI478_RS01455;product=flap endonuclease Xni;protein_id=WP_004142871.1;transl_table=11 NZ_CP085478.1 RefSeq gene 298848 299996 . - . ID=gene-LI478_RS01460;Name=fucO;gbkey=Gene;gene=fucO;gene_biotype=protein_coding;locus_tag=LI478_RS01460 NZ_CP085478.1 Protein Homology CDS 298848 299996 . - 0 ID=cds-WP_064153079.1;Parent=gene-LI478_RS01460;Dbxref=Genbank:WP_064153079.1;Name=WP_064153079.1;Ontology_term=GO:0016491;gbkey=CDS;gene=fucO;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228530.1;locus_tag=LI478_RS01460;product=lactaldehyde reductase;protein_id=WP_064153079.1;transl_table=11 NZ_CP085478.1 RefSeq gene 300024 300671 . - . ID=gene-LI478_RS01465;Name=fucA;gbkey=Gene;gene=fucA;gene_biotype=protein_coding;locus_tag=LI478_RS01465 NZ_CP085478.1 Protein Homology CDS 300024 300671 . - 0 ID=cds-WP_002915470.1;Parent=gene-LI478_RS01465;Dbxref=Genbank:WP_002915470.1;Name=WP_002915470.1;Ontology_term=GO:0042355;gbkey=CDS;gene=fucA;go_process=L-fucose catabolic process|0042355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228531.1;locus_tag=LI478_RS01465;product=L-fuculose-phosphate aldolase;protein_id=WP_002915470.1;transl_table=11 NZ_CP085478.1 RefSeq pseudogene 301238 302547 . + . ID=gene-LI478_RS01470;Name=fucP;gbkey=Gene;gene=fucP;gene_biotype=pseudogene;locus_tag=LI478_RS01470;pseudo=true NZ_CP085478.1 Protein Homology CDS 301238 302547 . + 0 ID=cds-LI478_RS01470;Parent=gene-LI478_RS01470;Note=frameshifted;Ontology_term=GO:0015756,GO:0015150;gbkey=CDS;gene=fucP;go_function=fucose transmembrane transporter activity|0015150||IEA;go_process=fucose transmembrane transport|0015756||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228533.1;locus_tag=LI478_RS01470;product=L-fucose:H+ symporter permease;pseudo=true;transl_table=11 NZ_CP085478.1 RefSeq pseudogene 302580 303092 . + . ID=gene-LI478_RS01475;Name=fucI;end_range=303092,.;gbkey=Gene;gene=fucI;gene_biotype=pseudogene;locus_tag=LI478_RS01475;partial=true;pseudo=true NZ_CP085478.1 Protein Homology CDS 302580 303092 . + 0 ID=cds-LI478_RS01475;Parent=gene-LI478_RS01475;Note=catalyzes the conversion of the aldose L-fucose into the corresponding ketose L-fuculose%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=303092,.;gbkey=CDS;gene=fucI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228534.1;locus_tag=LI478_RS01475;partial=true;product=L-fucose isomerase;pseudo=true;transl_table=11 NZ_CP085478.1 RefSeq pseudogene 303089 304363 . + . ID=gene-LI478_RS01480;Name=fucK;gbkey=Gene;gene=fucK;gene_biotype=pseudogene;locus_tag=LI478_RS01480;partial=true;pseudo=true;start_range=.,303089 NZ_CP085478.1 Protein Homology CDS 303089 304363 . + 0 ID=cds-LI478_RS01480;Parent=gene-LI478_RS01480;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0042355,GO:0008737;gbkey=CDS;gene=fucK;go_function=L-fuculokinase activity|0008737||IEA;go_process=L-fucose catabolic process|0042355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228535.1;locus_tag=LI478_RS01480;partial=true;product=L-fuculokinase;pseudo=true;start_range=.,303089;transl_table=11 NZ_CP085478.1 RefSeq gene 304365 304787 . + . ID=gene-LI478_RS01485;Name=fucU;gbkey=Gene;gene=fucU;gene_biotype=protein_coding;locus_tag=LI478_RS01485 NZ_CP085478.1 Protein Homology CDS 304365 304787 . + 0 ID=cds-WP_002915538.1;Parent=gene-LI478_RS01485;Dbxref=Genbank:WP_002915538.1;Name=WP_002915538.1;Ontology_term=GO:0042354,GO:0016854,GO:0042806;gbkey=CDS;gene=fucU;go_function=racemase and epimerase activity|0016854||IEA,fucose binding|0042806||IEA;go_process=L-fucose metabolic process|0042354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228536.1;locus_tag=LI478_RS01485;product=L-fucose mutarotase;protein_id=WP_002915538.1;transl_table=11 NZ_CP085478.1 RefSeq gene 304846 305556 . + . ID=gene-LI478_RS01490;Name=fucR;gbkey=Gene;gene=fucR;gene_biotype=protein_coding;locus_tag=LI478_RS01490 NZ_CP085478.1 Protein Homology CDS 304846 305556 . + 0 ID=cds-WP_004142883.1;Parent=gene-LI478_RS01490;Dbxref=Genbank:WP_004142883.1;Name=WP_004142883.1;gbkey=CDS;gene=fucR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228537.1;locus_tag=LI478_RS01490;product=L-fucose operon activator;protein_id=WP_004142883.1;transl_table=11 NZ_CP085478.1 RefSeq gene 305605 306705 . - . ID=gene-LI478_RS01495;Name=rlmM;gbkey=Gene;gene=rlmM;gene_biotype=protein_coding;locus_tag=LI478_RS01495 NZ_CP085478.1 Protein Homology CDS 305605 306705 . - 0 ID=cds-WP_032415472.1;Parent=gene-LI478_RS01495;Dbxref=Genbank:WP_032415472.1;Name=WP_032415472.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rlmM;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010435097.1;locus_tag=LI478_RS01495;product=23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM;protein_id=WP_032415472.1;transl_table=11 NZ_CP085478.1 RefSeq gene 306698 307093 . - . ID=gene-LI478_RS01500;Name=LI478_RS01500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS01500 NZ_CP085478.1 Protein Homology CDS 306698 307093 . - 0 ID=cds-WP_002915543.1;Parent=gene-LI478_RS01500;Dbxref=Genbank:WP_002915543.1;Name=WP_002915543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228539.1;locus_tag=LI478_RS01500;product=DUF423 domain-containing protein;protein_id=WP_002915543.1;transl_table=11 NZ_CP085478.1 RefSeq gene 307113 308030 . - . ID=gene-LI478_RS01505;Name=gcvA;gbkey=Gene;gene=gcvA;gene_biotype=protein_coding;locus_tag=LI478_RS01505 NZ_CP085478.1 Protein Homology CDS 307113 308030 . - 0 ID=cds-WP_002915545.1;Parent=gene-LI478_RS01505;Dbxref=Genbank:WP_002915545.1;Name=WP_002915545.1;gbkey=CDS;gene=gcvA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130970.1;locus_tag=LI478_RS01505;product=glycine cleavage system transcriptional regulator GcvA;protein_id=WP_002915545.1;transl_table=11 NZ_CP085478.1 RefSeq gene 308382 308606 . - . ID=gene-LI478_RS01510;Name=LI478_RS01510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS01510 NZ_CP085478.1 Protein Homology CDS 308382 308606 . - 0 ID=cds-WP_002915549.1;Parent=gene-LI478_RS01510;Dbxref=Genbank:WP_002915549.1;Name=WP_002915549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417289.2;locus_tag=LI478_RS01510;product=YgdI/YgdR family lipoprotein;protein_id=WP_002915549.1;transl_table=11 NZ_CP085478.1 RefSeq gene 308804 310009 . + . ID=gene-LI478_RS01515;Name=csdA;gbkey=Gene;gene=csdA;gene_biotype=protein_coding;locus_tag=LI478_RS01515 NZ_CP085478.1 Protein Homology CDS 308804 310009 . + 0 ID=cds-WP_004890035.1;Parent=gene-LI478_RS01515;Dbxref=Genbank:WP_004890035.1;Name=WP_004890035.1;Ontology_term=GO:0006534,GO:0016226,GO:0030170,GO:0031071;gbkey=CDS;gene=csdA;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=cysteine metabolic process|0006534||IEA,iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228542.1;locus_tag=LI478_RS01515;product=cysteine desulfurase CsdA;protein_id=WP_004890035.1;transl_table=11 NZ_CP085478.1 RefSeq gene 310009 310440 . + . ID=gene-LI478_RS01520;Name=csdE;gbkey=Gene;gene=csdE;gene_biotype=protein_coding;locus_tag=LI478_RS01520 NZ_CP085478.1 Protein Homology CDS 310009 310440 . + 0 ID=cds-WP_004142894.1;Parent=gene-LI478_RS01520;Dbxref=Genbank:WP_004142894.1;Name=WP_004142894.1;gbkey=CDS;gene=csdE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004205515.1;locus_tag=LI478_RS01520;product=cysteine desulfurase sulfur acceptor subunit CsdE;protein_id=WP_004142894.1;transl_table=11 NZ_CP085478.1 RefSeq gene 310483 311304 . - . ID=gene-LI478_RS01525;Name=tcdA;gbkey=Gene;gene=tcdA;gene_biotype=protein_coding;locus_tag=LI478_RS01525 NZ_CP085478.1 Protein Homology CDS 310483 311304 . - 0 ID=cds-WP_004174602.1;Parent=gene-LI478_RS01525;Dbxref=Genbank:WP_004174602.1;Name=WP_004174602.1;Ontology_term=GO:0008641;gbkey=CDS;gene=tcdA;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228544.1;locus_tag=LI478_RS01525;product=tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA;protein_id=WP_004174602.1;transl_table=11 NZ_CP085478.1 RefSeq gene 311392 312489 . - . ID=gene-LI478_RS01530;Name=mltA;gbkey=Gene;gene=mltA;gene_biotype=protein_coding;locus_tag=LI478_RS01530 NZ_CP085478.1 Protein Homology CDS 311392 312489 . - 0 ID=cds-WP_002915579.1;Parent=gene-LI478_RS01530;Dbxref=Genbank:WP_002915579.1;Name=WP_002915579.1;Ontology_term=GO:0009254,GO:0004553,GO:0019867;gbkey=CDS;gene=mltA;go_component=outer membrane|0019867||IEA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=peptidoglycan turnover|0009254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008785702.1;locus_tag=LI478_RS01530;product=murein transglycosylase A;protein_id=WP_002915579.1;transl_table=11 NZ_CP085478.1 RefSeq gene 312700 312776 . + . ID=gene-LI478_RS01535;Name=LI478_RS01535;gbkey=Gene;gene_biotype=tRNA;locus_tag=LI478_RS01535 NZ_CP085478.1 tRNAscan-SE tRNA 312700 312776 . + . ID=rna-LI478_RS01535;Parent=gene-LI478_RS01535;anticodon=(pos:312734..312736);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS01535;product=tRNA-Met NZ_CP085478.1 tRNAscan-SE exon 312700 312776 . + . ID=exon-LI478_RS01535-1;Parent=rna-LI478_RS01535;anticodon=(pos:312734..312736);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS01535;product=tRNA-Met NZ_CP085478.1 RefSeq gene 312810 312886 . + . ID=gene-LI478_RS01540;Name=LI478_RS01540;gbkey=Gene;gene_biotype=tRNA;locus_tag=LI478_RS01540 NZ_CP085478.1 tRNAscan-SE tRNA 312810 312886 . + . ID=rna-LI478_RS01540;Parent=gene-LI478_RS01540;anticodon=(pos:312844..312846);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS01540;product=tRNA-Met NZ_CP085478.1 tRNAscan-SE exon 312810 312886 . + . ID=exon-LI478_RS01540-1;Parent=rna-LI478_RS01540;anticodon=(pos:312844..312846);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS01540;product=tRNA-Met NZ_CP085478.1 RefSeq gene 312919 312995 . + . ID=gene-LI478_RS01545;Name=LI478_RS01545;gbkey=Gene;gene_biotype=tRNA;locus_tag=LI478_RS01545 NZ_CP085478.1 tRNAscan-SE tRNA 312919 312995 . + . ID=rna-LI478_RS01545;Parent=gene-LI478_RS01545;anticodon=(pos:312953..312955);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS01545;product=tRNA-Met NZ_CP085478.1 tRNAscan-SE exon 312919 312995 . + . ID=exon-LI478_RS01545-1;Parent=rna-LI478_RS01545;anticodon=(pos:312953..312955);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS01545;product=tRNA-Met NZ_CP085478.1 RefSeq gene 314242 314490 . + . ID=gene-LI478_RS01550;Name=LI478_RS01550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS01550 NZ_CP085478.1 Protein Homology CDS 314242 314490 . + 0 ID=cds-WP_227394167.1;Parent=gene-LI478_RS01550;Dbxref=Genbank:WP_227394167.1;Name=WP_227394167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004142899.1;locus_tag=LI478_RS01550;product=hypothetical protein;protein_id=WP_227394167.1;transl_table=11 NZ_CP085478.1 RefSeq gene 314492 315832 . + . ID=gene-LI478_RS01555;Name=tssK;gbkey=Gene;gene=tssK;gene_biotype=protein_coding;locus_tag=LI478_RS01555 NZ_CP085478.1 Protein Homology CDS 314492 315832 . + 0 ID=cds-WP_004142901.1;Parent=gene-LI478_RS01555;Dbxref=Genbank:WP_004142901.1;Name=WP_004142901.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssK;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020238917.1;locus_tag=LI478_RS01555;product=type VI secretion system baseplate subunit TssK;protein_id=WP_004142901.1;transl_table=11 NZ_CP085478.1 RefSeq gene 315829 316494 . + . ID=gene-LI478_RS01560;Name=tssL;gbkey=Gene;gene=tssL;gene_biotype=protein_coding;locus_tag=LI478_RS01560 NZ_CP085478.1 Protein Homology CDS 315829 316494 . + 0 ID=cds-WP_004181140.1;Parent=gene-LI478_RS01560;Dbxref=Genbank:WP_004181140.1;Name=WP_004181140.1;gbkey=CDS;gene=tssL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009485626.1;locus_tag=LI478_RS01560;product=type VI secretion system protein TssL%2C short form;protein_id=WP_004181140.1;transl_table=11 NZ_CP085478.1 RefSeq gene 316497 318200 . + . ID=gene-LI478_RS01565;Name=LI478_RS01565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS01565 NZ_CP085478.1 Protein Homology CDS 316497 318200 . + 0 ID=cds-WP_016530256.1;Parent=gene-LI478_RS01565;Dbxref=Genbank:WP_016530256.1;Name=WP_016530256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009485627.1;locus_tag=LI478_RS01565;product=OmpA family protein;protein_id=WP_016530256.1;transl_table=11 NZ_CP085478.1 RefSeq gene 318416 320971 . + . ID=gene-LI478_RS01570;Name=vgrG;gbkey=Gene;gene=vgrG;gene_biotype=protein_coding;locus_tag=LI478_RS01570 NZ_CP085478.1 Protein Homology CDS 318416 320971 . + 0 ID=cds-WP_102007254.1;Parent=gene-LI478_RS01570;Dbxref=Genbank:WP_102007254.1;Name=WP_102007254.1;gbkey=CDS;gene=vgrG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009485628.1;locus_tag=LI478_RS01570;product=type VI secretion system Vgr family protein;protein_id=WP_102007254.1;transl_table=11 NZ_CP085478.1 RefSeq gene 320974 322425 . + . ID=gene-LI478_RS01575;Name=LI478_RS01575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS01575 NZ_CP085478.1 Protein Homology CDS 320974 322425 . + 0 ID=cds-WP_032104126.1;Parent=gene-LI478_RS01575;Dbxref=Genbank:WP_032104126.1;Name=WP_032104126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009485629.1;locus_tag=LI478_RS01575;product=hypothetical protein;protein_id=WP_032104126.1;transl_table=11 NZ_CP085478.1 RefSeq gene 322465 323538 . + . ID=gene-LI478_RS01580;Name=LI478_RS01580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS01580 NZ_CP085478.1 Protein Homology CDS 322465 323538 . + 0 ID=cds-WP_009485630.1;Parent=gene-LI478_RS01580;Dbxref=Genbank:WP_009485630.1;Name=WP_009485630.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009485630.1;locus_tag=LI478_RS01580;product=hypothetical protein;protein_id=WP_009485630.1;transl_table=11 NZ_CP085478.1 RefSeq gene 323647 324018 . + . ID=gene-LI478_RS01585;Name=LI478_RS01585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS01585 NZ_CP085478.1 Protein Homology CDS 323647 324018 . + 0 ID=cds-WP_016530473.1;Parent=gene-LI478_RS01585;Dbxref=Genbank:WP_016530473.1;Name=WP_016530473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016530473.1;locus_tag=LI478_RS01585;product=hypothetical protein;protein_id=WP_016530473.1;transl_table=11 NZ_CP085478.1 RefSeq gene 324324 325463 . + . ID=gene-LI478_RS01590;Name=LI478_RS01590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS01590 NZ_CP085478.1 Protein Homology CDS 324324 325463 . + 0 ID=cds-WP_064153077.1;Parent=gene-LI478_RS01590;Dbxref=Genbank:WP_064153077.1;Name=WP_064153077.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009485632.1;locus_tag=LI478_RS01590;product=hypothetical protein;protein_id=WP_064153077.1;transl_table=11 NZ_CP085478.1 RefSeq gene 325460 328825 . + . ID=gene-LI478_RS01595;Name=LI478_RS01595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS01595 NZ_CP085478.1 Protein Homology CDS 325460 328825 . + 0 ID=cds-WP_064153076.1;Parent=gene-LI478_RS01595;Dbxref=Genbank:WP_064153076.1;Name=WP_064153076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009485633.1;locus_tag=LI478_RS01595;product=type VI secretion protein VasK;protein_id=WP_064153076.1;transl_table=11 NZ_CP085478.1 RefSeq gene 328791 329210 . + . ID=gene-LI478_RS01600;Name=LI478_RS01600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS01600 NZ_CP085478.1 Protein Homology CDS 328791 329210 . + 0 ID=cds-WP_162869795.1;Parent=gene-LI478_RS01600;Dbxref=Genbank:WP_162869795.1;Name=WP_162869795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020238538.1;locus_tag=LI478_RS01600;product=ImpA domain protein;protein_id=WP_162869795.1;transl_table=11 NZ_CP085478.1 RefSeq gene 329283 329543 . + . ID=gene-LI478_RS01605;Name=LI478_RS01605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS01605 NZ_CP085478.1 Protein Homology CDS 329283 329543 . + 0 ID=cds-WP_009485635.1;Parent=gene-LI478_RS01605;Dbxref=Genbank:WP_009485635.1;Name=WP_009485635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009485635.1;locus_tag=LI478_RS01605;product=PAAR domain-containing protein;protein_id=WP_009485635.1;transl_table=11 NZ_CP085478.1 RefSeq gene 329781 330188 . + . ID=gene-LI478_RS01610;Name=LI478_RS01610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS01610 NZ_CP085478.1 GeneMarkS-2+ CDS 329781 330188 . + 0 ID=cds-WP_223371290.1;Parent=gene-LI478_RS01610;Dbxref=Genbank:WP_223371290.1;Name=WP_223371290.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LI478_RS01610;product=hypothetical protein;protein_id=WP_223371290.1;transl_table=11 NZ_CP085478.1 RefSeq gene 330216 330824 . + . ID=gene-LI478_RS01615;Name=LI478_RS01615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS01615 NZ_CP085478.1 GeneMarkS-2+ CDS 330216 330824 . + 0 ID=cds-WP_223371288.1;Parent=gene-LI478_RS01615;Dbxref=Genbank:WP_223371288.1;Name=WP_223371288.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LI478_RS01615;product=hypothetical protein;protein_id=WP_223371288.1;transl_table=11 NZ_CP085478.1 RefSeq gene 330821 331432 . + . ID=gene-LI478_RS01620;Name=LI478_RS01620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS01620 NZ_CP085478.1 Protein Homology CDS 330821 331432 . + 0 ID=cds-WP_223371287.1;Parent=gene-LI478_RS01620;Dbxref=Genbank:WP_223371287.1;Name=WP_223371287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015958910.1;locus_tag=LI478_RS01620;product=hypothetical protein;protein_id=WP_223371287.1;transl_table=11 NZ_CP085478.1 RefSeq gene 331589 333349 . + . ID=gene-LI478_RS01625;Name=tssF;gbkey=Gene;gene=tssF;gene_biotype=protein_coding;locus_tag=LI478_RS01625 NZ_CP085478.1 Protein Homology CDS 331589 333349 . + 0 ID=cds-WP_009485639.1;Parent=gene-LI478_RS01625;Dbxref=Genbank:WP_009485639.1;Name=WP_009485639.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssF;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001536307.1;locus_tag=LI478_RS01625;product=type VI secretion system baseplate subunit TssF;protein_id=WP_009485639.1;transl_table=11 NZ_CP085478.1 RefSeq gene 333313 334395 . + . ID=gene-LI478_RS01630;Name=tssG;gbkey=Gene;gene=tssG;gene_biotype=protein_coding;locus_tag=LI478_RS01630 NZ_CP085478.1 Protein Homology CDS 333313 334395 . + 0 ID=cds-WP_004181150.1;Parent=gene-LI478_RS01630;Dbxref=Genbank:WP_004181150.1;Name=WP_004181150.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssG;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004181150.1;locus_tag=LI478_RS01630;product=type VI secretion system baseplate subunit TssG;protein_id=WP_004181150.1;transl_table=11 NZ_CP085478.1 RefSeq gene 334376 334909 . + . ID=gene-LI478_RS01635;Name=tssJ;gbkey=Gene;gene=tssJ;gene_biotype=protein_coding;locus_tag=LI478_RS01635 NZ_CP085478.1 Protein Homology CDS 334376 334909 . + 0 ID=cds-WP_032104130.1;Parent=gene-LI478_RS01635;Dbxref=Genbank:WP_032104130.1;Name=WP_032104130.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssJ;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000484007.1;locus_tag=LI478_RS01635;product=type VI secretion system lipoprotein TssJ;protein_id=WP_032104130.1;transl_table=11 NZ_CP085478.1 RefSeq gene 334913 335338 . + . ID=gene-LI478_RS01640;Name=tssE;gbkey=Gene;gene=tssE;gene_biotype=protein_coding;locus_tag=LI478_RS01640 NZ_CP085478.1 Protein Homology CDS 334913 335338 . + 0 ID=cds-WP_004181152.1;Parent=gene-LI478_RS01640;Dbxref=Genbank:WP_004181152.1;Name=WP_004181152.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssE;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004181152.1;locus_tag=LI478_RS01640;product=type VI secretion system baseplate subunit TssE;protein_id=WP_004181152.1;transl_table=11 NZ_CP085478.1 RefSeq gene 335407 335544 . - . ID=gene-LI478_RS01645;Name=LI478_RS01645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS01645 NZ_CP085478.1 GeneMarkS-2+ CDS 335407 335544 . - 0 ID=cds-WP_153582952.1;Parent=gene-LI478_RS01645;Dbxref=Genbank:WP_153582952.1;Name=WP_153582952.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LI478_RS01645;product=hypothetical protein;protein_id=WP_153582952.1;transl_table=11 NZ_CP085478.1 RefSeq gene 335564 336619 . - . ID=gene-LI478_RS01650;Name=cobT;gbkey=Gene;gene=cobT;gene_biotype=protein_coding;locus_tag=LI478_RS01650 NZ_CP085478.1 Protein Homology CDS 335564 336619 . - 0 ID=cds-WP_004143920.1;Parent=gene-LI478_RS01650;Dbxref=Genbank:WP_004143920.1;Name=WP_004143920.1;Ontology_term=GO:0009236,GO:0008939;gbkey=CDS;gene=cobT;go_function=nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity|0008939||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228546.1;locus_tag=LI478_RS01650;product=nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase;protein_id=WP_004143920.1;transl_table=11 NZ_CP085478.1 RefSeq gene 336663 337208 . - . ID=gene-LI478_RS01655;Name=cobU;gbkey=Gene;gene=cobU;gene_biotype=protein_coding;locus_tag=LI478_RS01655 NZ_CP085478.1 Protein Homology CDS 336663 337208 . - 0 ID=cds-WP_002915611.1;Parent=gene-LI478_RS01655;Dbxref=Genbank:WP_002915611.1;Name=WP_002915611.1;Ontology_term=GO:0009236,GO:0000166,GO:0043752;gbkey=CDS;gene=cobU;go_function=nucleotide binding|0000166||IEA,adenosylcobinamide kinase activity|0043752||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228547.1;locus_tag=LI478_RS01655;product=bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase;protein_id=WP_002915611.1;transl_table=11 NZ_CP085478.1 RefSeq gene 337202 338725 . - . ID=gene-LI478_RS01660;Name=LI478_RS01660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS01660 NZ_CP085478.1 Protein Homology CDS 337202 338725 . - 0 ID=cds-WP_004174595.1;Parent=gene-LI478_RS01660;Dbxref=Genbank:WP_004174595.1;Name=WP_004174595.1;Ontology_term=GO:0009236,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228548.1;locus_tag=LI478_RS01660;product=cobyric acid synthase;protein_id=WP_004174595.1;transl_table=11 NZ_CP085478.1 RefSeq gene 338722 339546 . - . ID=gene-LI478_RS01665;Name=LI478_RS01665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS01665 NZ_CP085478.1 Protein Homology CDS 338722 339546 . - 0 ID=cds-WP_002915614.1;Parent=gene-LI478_RS01665;Dbxref=Genbank:WP_002915614.1;Name=WP_002915614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228549.1;locus_tag=LI478_RS01665;product=energy-coupling factor ABC transporter ATP-binding protein;protein_id=WP_002915614.1;transl_table=11 NZ_CP085478.1 RefSeq gene 339555 340232 . - . ID=gene-LI478_RS01670;Name=LI478_RS01670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS01670 NZ_CP085478.1 Protein Homology CDS 339555 340232 . - 0 ID=cds-WP_002915616.1;Parent=gene-LI478_RS01670;Dbxref=Genbank:WP_002915616.1;Name=WP_002915616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228550.1;locus_tag=LI478_RS01670;product=energy-coupling factor ABC transporter transmembrane protein;protein_id=WP_002915616.1;transl_table=11 NZ_CP085478.1 RefSeq gene 340219 340500 . - . ID=gene-LI478_RS01675;Name=LI478_RS01675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS01675 NZ_CP085478.1 Protein Homology CDS 340219 340500 . - 0 ID=cds-WP_002915619.1;Parent=gene-LI478_RS01675;Dbxref=Genbank:WP_002915619.1;Name=WP_002915619.1;Ontology_term=GO:0006824,GO:0009236,GO:0015087,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=cobalt ion transmembrane transporter activity|0015087||IEA;go_process=cobalt ion transport|0006824||IEA,cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228551.1;locus_tag=LI478_RS01675;product=energy-coupling factor ABC transporter substrate-binding protein;protein_id=WP_002915619.1;transl_table=11 NZ_CP085478.1 RefSeq gene 340502 341239 . - . ID=gene-LI478_RS01680;Name=cbiM;gbkey=Gene;gene=cbiM;gene_biotype=protein_coding;locus_tag=LI478_RS01680 NZ_CP085478.1 Protein Homology CDS 340502 341239 . - 0 ID=cds-WP_002915621.1;Parent=gene-LI478_RS01680;Dbxref=Genbank:WP_002915621.1;Name=WP_002915621.1;Ontology_term=GO:0009236;gbkey=CDS;gene=cbiM;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228552.1;locus_tag=LI478_RS01680;product=cobalt ECF transporter S component CbiM;protein_id=WP_002915621.1;transl_table=11 NZ_CP085478.1 RefSeq gene 341239 341949 . - . ID=gene-LI478_RS01685;Name=LI478_RS01685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS01685 NZ_CP085478.1 Protein Homology CDS 341239 341949 . - 0 ID=cds-WP_002915624.1;Parent=gene-LI478_RS01685;Dbxref=Genbank:WP_002915624.1;Name=WP_002915624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228553.1;locus_tag=LI478_RS01685;product=cobalt-factor II C(20)-methyltransferase;protein_id=WP_002915624.1;transl_table=11 NZ_CP085478.1 RefSeq gene 341946 342740 . - . ID=gene-LI478_RS01690;Name=LI478_RS01690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS01690 NZ_CP085478.1 Protein Homology CDS 341946 342740 . - 0 ID=cds-WP_064153075.1;Parent=gene-LI478_RS01690;Dbxref=Genbank:WP_064153075.1;Name=WP_064153075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228554.1;locus_tag=LI478_RS01690;product=sirohydrochlorin cobaltochelatase;protein_id=WP_064153075.1;transl_table=11 NZ_CP085478.1 RefSeq gene 342751 343536 . - . ID=gene-LI478_RS01695;Name=LI478_RS01695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS01695 NZ_CP085478.1 Protein Homology CDS 342751 343536 . - 0 ID=cds-WP_023285512.1;Parent=gene-LI478_RS01695;Dbxref=Genbank:WP_023285512.1;Name=WP_023285512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228555.1;locus_tag=LI478_RS01695;product=cobalt-precorrin-6A reductase;protein_id=WP_023285512.1;transl_table=11 NZ_CP085478.1 RefSeq gene 343533 344258 . - . ID=gene-LI478_RS01700;Name=LI478_RS01700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS01700 NZ_CP085478.1 Protein Homology CDS 343533 344258 . - 0 ID=cds-WP_004143930.1;Parent=gene-LI478_RS01700;Dbxref=Genbank:WP_004143930.1;Name=WP_004143930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228556.1;locus_tag=LI478_RS01700;product=precorrin-3B C(17)-methyltransferase;protein_id=WP_004143930.1;transl_table=11 NZ_CP085478.1 RefSeq gene 344258 345313 . - . ID=gene-LI478_RS01705;Name=cbiG;gbkey=Gene;gene=cbiG;gene_biotype=protein_coding;locus_tag=LI478_RS01705 NZ_CP085478.1 Protein Homology CDS 344258 345313 . - 0 ID=cds-WP_064153074.1;Parent=gene-LI478_RS01705;Dbxref=Genbank:WP_064153074.1;Name=WP_064153074.1;gbkey=CDS;gene=cbiG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228557.1;locus_tag=LI478_RS01705;product=cobalt-precorrin 5A hydrolase;protein_id=WP_064153074.1;transl_table=11 NZ_CP085478.1 RefSeq gene 345294 346067 . - . ID=gene-LI478_RS01710;Name=LI478_RS01710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS01710 NZ_CP085478.1 Protein Homology CDS 345294 346067 . - 0 ID=cds-WP_004149602.1;Parent=gene-LI478_RS01710;Dbxref=Genbank:WP_004149602.1;Name=WP_004149602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228558.1;locus_tag=LI478_RS01710;product=cobalt-precorrin-4 methyltransferase;protein_id=WP_004149602.1;transl_table=11 NZ_CP085478.1 RefSeq gene 346060 346629 . - . ID=gene-LI478_RS01715;Name=LI478_RS01715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS01715 NZ_CP085478.1 Protein Homology CDS 346060 346629 . - 0 ID=cds-WP_020804170.1;Parent=gene-LI478_RS01715;Dbxref=Genbank:WP_020804170.1;Name=WP_020804170.1;Ontology_term=GO:0009236,GO:0008276;gbkey=CDS;go_function=protein methyltransferase activity|0008276||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228559.1;locus_tag=LI478_RS01715;product=decarboxylating cobalt-precorrin-6B (C(15))-methyltransferase;protein_id=WP_020804170.1;transl_table=11 NZ_CP085478.1 RefSeq gene 346619 347224 . - . ID=gene-LI478_RS01720;Name=LI478_RS01720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS01720 NZ_CP085478.1 Protein Homology CDS 346619 347224 . - 0 ID=cds-WP_004174583.1;Parent=gene-LI478_RS01720;Dbxref=Genbank:WP_004174583.1;Name=WP_004174583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228560.1;locus_tag=LI478_RS01720;product=cobalt-precorrin-7 (C(5))-methyltransferase;protein_id=WP_004174583.1;transl_table=11 NZ_CP085478.1 RefSeq gene 347218 348357 . - . ID=gene-LI478_RS01725;Name=cbiD;gbkey=Gene;gene=cbiD;gene_biotype=protein_coding;locus_tag=LI478_RS01725 NZ_CP085478.1 Protein Homology CDS 347218 348357 . - 0 ID=cds-WP_002915708.1;Parent=gene-LI478_RS01725;Dbxref=Genbank:WP_002915708.1;Name=WP_002915708.1;Ontology_term=GO:0009236,GO:0005737;gbkey=CDS;gene=cbiD;go_component=cytoplasm|0005737||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228561.1;locus_tag=LI478_RS01725;product=cobalt-precorrin-5B (C(1))-methyltransferase CbiD;protein_id=WP_002915708.1;transl_table=11 NZ_CP085478.1 RefSeq gene 348354 348989 . - . ID=gene-LI478_RS01730;Name=LI478_RS01730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS01730 NZ_CP085478.1 Protein Homology CDS 348354 348989 . - 0 ID=cds-WP_002915711.1;Parent=gene-LI478_RS01730;Dbxref=Genbank:WP_002915711.1;Name=WP_002915711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228562.1;locus_tag=LI478_RS01730;product=cobalt-precorrin-8 methylmutase;protein_id=WP_002915711.1;transl_table=11 NZ_CP085478.1 RefSeq gene 349000 349959 . - . ID=gene-LI478_RS01735;Name=cbiB;gbkey=Gene;gene=cbiB;gene_biotype=protein_coding;locus_tag=LI478_RS01735 NZ_CP085478.1 Protein Homology CDS 349000 349959 . - 0 ID=cds-WP_040218899.1;Parent=gene-LI478_RS01735;Dbxref=Genbank:WP_040218899.1;Name=WP_040218899.1;Ontology_term=GO:0009236,GO:0016880;gbkey=CDS;gene=cbiB;go_function=acid-ammonia (or amide) ligase activity|0016880||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228563.1;locus_tag=LI478_RS01735;product=adenosylcobinamide-phosphate synthase CbiB;protein_id=WP_040218899.1;transl_table=11 NZ_CP085478.1 RefSeq gene 349956 351332 . - . ID=gene-LI478_RS01740;Name=LI478_RS01740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS01740 NZ_CP085478.1 Protein Homology CDS 349956 351332 . - 0 ID=cds-WP_009308557.1;Parent=gene-LI478_RS01740;Dbxref=Genbank:WP_009308557.1;Name=WP_009308557.1;Ontology_term=GO:0042242;gbkey=CDS;go_function=cobyrinic acid a%2Cc-diamide synthase activity|0042242||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228564.1;locus_tag=LI478_RS01740;product=cobyrinate a%2Cc-diamide synthase;protein_id=WP_009308557.1;transl_table=11 NZ_CP085478.1 cmsearch riboswitch 351425 351603 . - . ID=id-NZ_CP085478.1:351425..351603;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_CP085478.1 RefSeq gene 351885 352796 . - . ID=gene-LI478_RS01745;Name=pocR;gbkey=Gene;gene=pocR;gene_biotype=protein_coding;locus_tag=LI478_RS01745 NZ_CP085478.1 Protein Homology CDS 351885 352796 . - 0 ID=cds-WP_004181164.1;Parent=gene-LI478_RS01745;Dbxref=Genbank:WP_004181164.1;Name=WP_004181164.1;gbkey=CDS;gene=pocR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004143938.1;locus_tag=LI478_RS01745;product=regulatory protein PocR;protein_id=WP_004181164.1;transl_table=11 NZ_CP085478.1 RefSeq gene 353000 353809 . - . ID=gene-LI478_RS01750;Name=pduF;gbkey=Gene;gene=pduF;gene_biotype=protein_coding;locus_tag=LI478_RS01750 NZ_CP085478.1 Protein Homology CDS 353000 353809 . - 0 ID=cds-WP_004185469.1;Parent=gene-LI478_RS01750;Dbxref=Genbank:WP_004185469.1;Name=WP_004185469.1;gbkey=CDS;gene=pduF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004185469.1;locus_tag=LI478_RS01750;product=propanediol diffusion facilitator PduF;protein_id=WP_004185469.1;transl_table=11 NZ_CP085478.1 RefSeq gene 354334 354618 . + . ID=gene-LI478_RS01755;Name=pduA;gbkey=Gene;gene=pduA;gene_biotype=protein_coding;locus_tag=LI478_RS01755 NZ_CP085478.1 Protein Homology CDS 354334 354618 . + 0 ID=cds-WP_002915737.1;Parent=gene-LI478_RS01755;Dbxref=Genbank:WP_002915737.1;Name=WP_002915737.1;gbkey=CDS;gene=pduA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228566.1;locus_tag=LI478_RS01755;product=propanediol utilization microcompartment protein PduA;protein_id=WP_002915737.1;transl_table=11 NZ_CP085478.1 RefSeq gene 354615 355427 . + . ID=gene-LI478_RS01760;Name=pduB;gbkey=Gene;gene=pduB;gene_biotype=protein_coding;locus_tag=LI478_RS01760 NZ_CP085478.1 Protein Homology CDS 354615 355427 . + 0 ID=cds-WP_002915739.1;Parent=gene-LI478_RS01760;Dbxref=Genbank:WP_002915739.1;Name=WP_002915739.1;Ontology_term=GO:0005198,GO:0031469;gbkey=CDS;gene=pduB;go_component=bacterial microcompartment|0031469||IEA;go_function=structural molecule activity|0005198||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228567.1;locus_tag=LI478_RS01760;product=propanediol utilization microcompartment protein PduB;protein_id=WP_002915739.1;transl_table=11 NZ_CP085478.1 RefSeq gene 355446 357110 . + . ID=gene-LI478_RS01765;Name=pduC;gbkey=Gene;gene=pduC;gene_biotype=protein_coding;locus_tag=LI478_RS01765 NZ_CP085478.1 Protein Homology CDS 355446 357110 . + 0 ID=cds-WP_002915744.1;Parent=gene-LI478_RS01765;Dbxref=Genbank:WP_002915744.1;Name=WP_002915744.1;gbkey=CDS;gene=pduC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228568.1;locus_tag=LI478_RS01765;product=propanediol dehydratase large subunit PduC;protein_id=WP_002915744.1;transl_table=11 NZ_CP085478.1 RefSeq gene 357121 357810 . + . ID=gene-LI478_RS01770;Name=pduD;gbkey=Gene;gene=pduD;gene_biotype=protein_coding;locus_tag=LI478_RS01770 NZ_CP085478.1 Protein Homology CDS 357121 357810 . + 0 ID=cds-WP_002915746.1;Parent=gene-LI478_RS01770;Dbxref=Genbank:WP_002915746.1;Name=WP_002915746.1;gbkey=CDS;gene=pduD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228569.1;locus_tag=LI478_RS01770;product=propanediol dehydratase medium subunit PduD;protein_id=WP_002915746.1;transl_table=11 NZ_CP085478.1 RefSeq gene 357825 358349 . + . ID=gene-LI478_RS01775;Name=pduE;gbkey=Gene;gene=pduE;gene_biotype=protein_coding;locus_tag=LI478_RS01775 NZ_CP085478.1 Protein Homology CDS 357825 358349 . + 0 ID=cds-WP_016946079.1;Parent=gene-LI478_RS01775;Dbxref=Genbank:WP_016946079.1;Name=WP_016946079.1;gbkey=CDS;gene=pduE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228570.1;locus_tag=LI478_RS01775;product=propanediol dehydratase small subunit PduE;protein_id=WP_016946079.1;transl_table=11 NZ_CP085478.1 RefSeq gene 358363 360195 . + . ID=gene-LI478_RS01780;Name=LI478_RS01780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS01780 NZ_CP085478.1 Protein Homology CDS 358363 360195 . + 0 ID=cds-WP_004174565.1;Parent=gene-LI478_RS01780;Dbxref=Genbank:WP_004174565.1;Name=WP_004174565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228571.1;locus_tag=LI478_RS01780;product=diol dehydratase reactivase subunit alpha;protein_id=WP_004174565.1;transl_table=11 NZ_CP085478.1 RefSeq gene 360185 360535 . + . ID=gene-LI478_RS01785;Name=LI478_RS01785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS01785 NZ_CP085478.1 Protein Homology CDS 360185 360535 . + 0 ID=cds-WP_004900279.1;Parent=gene-LI478_RS01785;Dbxref=Genbank:WP_004900279.1;Name=WP_004900279.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228572.1;locus_tag=LI478_RS01785;product=glycerol dehydratase reactivase beta/small subunit family protein;protein_id=WP_004900279.1;transl_table=11 NZ_CP085478.1 RefSeq gene 360554 360829 . + . ID=gene-LI478_RS01790;Name=pduJ;gbkey=Gene;gene=pduJ;gene_biotype=protein_coding;locus_tag=LI478_RS01790 NZ_CP085478.1 Protein Homology CDS 360554 360829 . + 0 ID=cds-WP_002915806.1;Parent=gene-LI478_RS01790;Dbxref=Genbank:WP_002915806.1;Name=WP_002915806.1;gbkey=CDS;gene=pduJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228573.1;locus_tag=LI478_RS01790;product=propanediol utilization microcompartment protein PduJ;protein_id=WP_002915806.1;transl_table=11 NZ_CP085478.1 RefSeq gene 360851 361297 . + . ID=gene-LI478_RS01795;Name=LI478_RS01795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS01795 NZ_CP085478.1 Protein Homology CDS 360851 361297 . + 0 ID=cds-WP_002915808.1;Parent=gene-LI478_RS01795;Dbxref=Genbank:WP_002915808.1;Name=WP_002915808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228574.1;locus_tag=LI478_RS01795;product=BMC domain-containing protein;protein_id=WP_002915808.1;transl_table=11 NZ_CP085478.1 RefSeq gene 361297 361929 . + . ID=gene-LI478_RS01800;Name=LI478_RS01800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS01800 NZ_CP085478.1 Protein Homology CDS 361297 361929 . + 0 ID=cds-WP_002915810.1;Parent=gene-LI478_RS01800;Dbxref=Genbank:WP_002915810.1;Name=WP_002915810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228575.1;locus_tag=LI478_RS01800;product=phosphate propanoyltransferase;protein_id=WP_002915810.1;transl_table=11 NZ_CP085478.1 RefSeq gene 361926 362417 . + . ID=gene-LI478_RS01805;Name=pduM;gbkey=Gene;gene=pduM;gene_biotype=protein_coding;locus_tag=LI478_RS01805 NZ_CP085478.1 Protein Homology CDS 361926 362417 . + 0 ID=cds-WP_002915812.1;Parent=gene-LI478_RS01805;Dbxref=Genbank:WP_002915812.1;Name=WP_002915812.1;gbkey=CDS;gene=pduM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228576.1;locus_tag=LI478_RS01805;product=microcompartment protein PduM;protein_id=WP_002915812.1;transl_table=11 NZ_CP085478.1 RefSeq gene 362421 362696 . + . ID=gene-LI478_RS01810;Name=LI478_RS01810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS01810 NZ_CP085478.1 Protein Homology CDS 362421 362696 . + 0 ID=cds-WP_002915814.1;Parent=gene-LI478_RS01810;Dbxref=Genbank:WP_002915814.1;Name=WP_002915814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228577.1;locus_tag=LI478_RS01810;product=ethanolamine utilization protein EutN;protein_id=WP_002915814.1;transl_table=11 NZ_CP085478.1 RefSeq gene 362707 363723 . + . ID=gene-LI478_RS01815;Name=pduO;gbkey=Gene;gene=pduO;gene_biotype=protein_coding;locus_tag=LI478_RS01815 NZ_CP085478.1 Protein Homology CDS 362707 363723 . + 0 ID=cds-WP_002915816.1;Parent=gene-LI478_RS01815;Dbxref=Genbank:WP_002915816.1;Name=WP_002915816.1;gbkey=CDS;gene=pduO;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228578.1;locus_tag=LI478_RS01815;product=two-domain cob(I)yrinic acid a%2Cc-diamide adenosyltransferase PduO;protein_id=WP_002915816.1;transl_table=11 NZ_CP085478.1 RefSeq gene 363720 365108 . + . ID=gene-LI478_RS01820;Name=pduP;gbkey=Gene;gene=pduP;gene_biotype=protein_coding;locus_tag=LI478_RS01820 NZ_CP085478.1 Protein Homology CDS 363720 365108 . + 0 ID=cds-WP_002915818.1;Parent=gene-LI478_RS01820;Dbxref=Genbank:WP_002915818.1;Name=WP_002915818.1;gbkey=CDS;gene=pduP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228579.1;locus_tag=LI478_RS01820;product=CoA-acylating propionaldehyde dehydrogenase PduP;protein_id=WP_002915818.1;transl_table=11 NZ_CP085478.1 RefSeq gene 365120 366232 . + . ID=gene-LI478_RS01825;Name=pduQ;gbkey=Gene;gene=pduQ;gene_biotype=protein_coding;locus_tag=LI478_RS01825 NZ_CP085478.1 Protein Homology CDS 365120 366232 . + 0 ID=cds-WP_023286837.1;Parent=gene-LI478_RS01825;Dbxref=Genbank:WP_023286837.1;Name=WP_023286837.1;gbkey=CDS;gene=pduQ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228580.1;locus_tag=LI478_RS01825;product=1-propanol dehydrogenase PduQ;protein_id=WP_023286837.1;transl_table=11 NZ_CP085478.1 RefSeq gene 366229 367581 . + . ID=gene-LI478_RS01830;Name=LI478_RS01830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS01830 NZ_CP085478.1 Protein Homology CDS 366229 367581 . + 0 ID=cds-WP_004149613.1;Parent=gene-LI478_RS01830;Dbxref=Genbank:WP_004149613.1;Name=WP_004149613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228581.1;locus_tag=LI478_RS01830;product=SLBB domain-containing protein;protein_id=WP_004149613.1;transl_table=11 NZ_CP085478.1 RefSeq gene 367584 368138 . + . ID=gene-LI478_RS01835;Name=pduT;gbkey=Gene;gene=pduT;gene_biotype=protein_coding;locus_tag=LI478_RS01835 NZ_CP085478.1 Protein Homology CDS 367584 368138 . + 0 ID=cds-WP_064153072.1;Parent=gene-LI478_RS01835;Dbxref=Genbank:WP_064153072.1;Name=WP_064153072.1;gbkey=CDS;gene=pduT;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228582.1;locus_tag=LI478_RS01835;product=propanediol utilization microcompartment protein PduT;protein_id=WP_064153072.1;transl_table=11 NZ_CP085478.1 RefSeq gene 368138 368488 . + . ID=gene-LI478_RS01840;Name=pduU;gbkey=Gene;gene=pduU;gene_biotype=protein_coding;locus_tag=LI478_RS01840 NZ_CP085478.1 Protein Homology CDS 368138 368488 . + 0 ID=cds-WP_002915850.1;Parent=gene-LI478_RS01840;Dbxref=Genbank:WP_002915850.1;Name=WP_002915850.1;gbkey=CDS;gene=pduU;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228583.1;locus_tag=LI478_RS01840;product=propanediol utilization microcompartment protein PduU;protein_id=WP_002915850.1;transl_table=11 NZ_CP085478.1 RefSeq gene 368493 368933 . + . ID=gene-LI478_RS01845;Name=pduV;gbkey=Gene;gene=pduV;gene_biotype=protein_coding;locus_tag=LI478_RS01845 NZ_CP085478.1 Protein Homology CDS 368493 368933 . + 0 ID=cds-WP_002915858.1;Parent=gene-LI478_RS01845;Dbxref=Genbank:WP_002915858.1;Name=WP_002915858.1;gbkey=CDS;gene=pduV;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228584.1;locus_tag=LI478_RS01845;product=propanediol utilization protein PduV;protein_id=WP_002915858.1;transl_table=11 NZ_CP085478.1 RefSeq gene 368930 370144 . + . ID=gene-LI478_RS01850;Name=LI478_RS01850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS01850 NZ_CP085478.1 Protein Homology CDS 368930 370144 . + 0 ID=cds-WP_032418383.1;Parent=gene-LI478_RS01850;Dbxref=Genbank:WP_032418383.1;Name=WP_032418383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228585.1;locus_tag=LI478_RS01850;product=acetate/propionate family kinase;protein_id=WP_032418383.1;transl_table=11 NZ_CP085478.1 RefSeq gene 370236 371102 . + . ID=gene-LI478_RS01855;Name=LI478_RS01855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS01855 NZ_CP085478.1 Protein Homology CDS 370236 371102 . + 0 ID=cds-WP_004193729.1;Parent=gene-LI478_RS01855;Dbxref=Genbank:WP_004193729.1;Name=WP_004193729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632997.1;locus_tag=LI478_RS01855;product=L-threonine kinase;protein_id=WP_004193729.1;transl_table=11 NZ_CP085478.1 RefSeq gene 371106 372182 . - . ID=gene-LI478_RS01860;Name=cobD;gbkey=Gene;gene=cobD;gene_biotype=protein_coding;locus_tag=LI478_RS01860 NZ_CP085478.1 Protein Homology CDS 371106 372182 . - 0 ID=cds-WP_004185485.1;Parent=gene-LI478_RS01860;Dbxref=Genbank:WP_004185485.1;Name=WP_004185485.1;Ontology_term=GO:0009236,GO:0048472,GO:0005737;gbkey=CDS;gene=cobD;go_component=cytoplasm|0005737||IEA;go_function=threonine-phosphate decarboxylase activity|0048472||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228587.1;locus_tag=LI478_RS01860;product=threonine-phosphate decarboxylase CobD;protein_id=WP_004185485.1;transl_table=11 NZ_CP085478.1 RefSeq gene 372200 373453 . - . ID=gene-LI478_RS01865;Name=amiC;gbkey=Gene;gene=amiC;gene_biotype=protein_coding;locus_tag=LI478_RS01865 NZ_CP085478.1 Protein Homology CDS 372200 373453 . - 0 ID=cds-WP_004174538.1;Parent=gene-LI478_RS01865;Dbxref=Genbank:WP_004174538.1;Name=WP_004174538.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=amiC;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228588.1;locus_tag=LI478_RS01865;product=N-acetylmuramoyl-L-alanine amidase AmiC;protein_id=WP_004174538.1;transl_table=11 NZ_CP085478.1 RefSeq gene 373681 375012 . + . ID=gene-LI478_RS01870;Name=argA;gbkey=Gene;gene=argA;gene_biotype=protein_coding;locus_tag=LI478_RS01870 NZ_CP085478.1 Protein Homology CDS 373681 375012 . + 0 ID=cds-WP_064153071.1;Parent=gene-LI478_RS01870;Dbxref=Genbank:WP_064153071.1;Name=WP_064153071.1;Ontology_term=GO:0006526,GO:0004042;gbkey=CDS;gene=argA;go_function=acetyl-CoA:L-glutamate N-acetyltransferase activity|0004042||IEA;go_process=arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228589.1;locus_tag=LI478_RS01870;product=amino-acid N-acetyltransferase;protein_id=WP_064153071.1;transl_table=11 NZ_CP085478.1 RefSeq gene 375242 375562 . + . ID=gene-LI478_RS01875;Name=LI478_RS01875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS01875 NZ_CP085478.1 Protein Homology CDS 375242 375562 . + 0 ID=cds-WP_002915873.1;Parent=gene-LI478_RS01875;Dbxref=Genbank:WP_002915873.1;Name=WP_002915873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228590.1;locus_tag=LI478_RS01875;product=hypothetical protein;protein_id=WP_002915873.1;transl_table=11 NZ_CP085478.1 RefSeq gene 375620 377464 . - . ID=gene-LI478_RS01880;Name=recD;gbkey=Gene;gene=recD;gene_biotype=protein_coding;locus_tag=LI478_RS01880 NZ_CP085478.1 Protein Homology CDS 375620 377464 . - 0 ID=cds-WP_004900323.1;Parent=gene-LI478_RS01880;Dbxref=Genbank:WP_004900323.1;Name=WP_004900323.1;Ontology_term=GO:0006302,GO:0006310,GO:0004386,GO:0008854,GO:0009338;gbkey=CDS;gene=recD;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=helicase activity|0004386||IEA,exodeoxyribonuclease V activity|0008854||IEA;go_process=double-strand break repair|0006302||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228591.1;locus_tag=LI478_RS01880;product=exodeoxyribonuclease V subunit alpha;protein_id=WP_004900323.1;transl_table=11 NZ_CP085478.1 RefSeq gene 377461 380997 . - . ID=gene-LI478_RS01885;Name=recB;gbkey=Gene;gene=recB;gene_biotype=protein_coding;locus_tag=LI478_RS01885 NZ_CP085478.1 Protein Homology CDS 377461 380997 . - 0 ID=cds-WP_020317267.1;Parent=gene-LI478_RS01885;Dbxref=Genbank:WP_020317267.1;Name=WP_020317267.1;Ontology_term=GO:0006281,GO:0003677,GO:0003678,GO:0005524,GO:0008854;gbkey=CDS;gene=recB;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,exodeoxyribonuclease V activity|0008854||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004151968.1;locus_tag=LI478_RS01885;product=exodeoxyribonuclease V subunit beta;protein_id=WP_020317267.1;transl_table=11 NZ_CP085478.1 RefSeq gene 380994 383879 . - . ID=gene-LI478_RS01890;Name=ptrA;gbkey=Gene;gene=ptrA;gene_biotype=protein_coding;locus_tag=LI478_RS01890 NZ_CP085478.1 Protein Homology CDS 380994 383879 . - 0 ID=cds-WP_004181181.1;Parent=gene-LI478_RS01890;Dbxref=Genbank:WP_004181181.1;Name=WP_004181181.1;Ontology_term=GO:0006508,GO:0004222,GO:0046872;gbkey=CDS;gene=ptrA;go_function=metalloendopeptidase activity|0004222||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417298.1;locus_tag=LI478_RS01890;product=pitrilysin;protein_id=WP_004181181.1;transl_table=11 NZ_CP085478.1 RefSeq gene 384000 387377 . - . ID=gene-LI478_RS01895;Name=recC;gbkey=Gene;gene=recC;gene_biotype=protein_coding;locus_tag=LI478_RS01895 NZ_CP085478.1 Protein Homology CDS 384000 387377 . - 0 ID=cds-WP_004149621.1;Parent=gene-LI478_RS01895;Dbxref=Genbank:WP_004149621.1;Name=WP_004149621.1;Ontology_term=GO:0008854,GO:0009338;gbkey=CDS;gene=recC;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=exodeoxyribonuclease V activity|0008854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228594.1;locus_tag=LI478_RS01895;product=exodeoxyribonuclease V subunit gamma;protein_id=WP_004149621.1;transl_table=11 NZ_CP085478.1 RefSeq gene 387390 387713 . - . ID=gene-LI478_RS01900;Name=LI478_RS01900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS01900 NZ_CP085478.1 Protein Homology CDS 387390 387713 . - 0 ID=cds-WP_002915888.1;Parent=gene-LI478_RS01900;Dbxref=Genbank:WP_002915888.1;Name=WP_002915888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228595.1;locus_tag=LI478_RS01900;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;protein_id=WP_002915888.1;transl_table=11 NZ_CP085478.1 RefSeq gene 387698 388105 . - . ID=gene-LI478_RS01905;Name=LI478_RS01905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS01905 NZ_CP085478.1 Protein Homology CDS 387698 388105 . - 0 ID=cds-WP_004181182.1;Parent=gene-LI478_RS01905;Dbxref=Genbank:WP_004181182.1;Name=WP_004181182.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228596.1;locus_tag=LI478_RS01905;product=DUF2509 family protein;protein_id=WP_004181182.1;transl_table=11 NZ_CP085478.1 RefSeq gene 388102 388659 . - . ID=gene-LI478_RS01910;Name=LI478_RS01910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS01910 NZ_CP085478.1 Protein Homology CDS 388102 388659 . - 0 ID=cds-WP_004143963.1;Parent=gene-LI478_RS01910;Dbxref=Genbank:WP_004143963.1;Name=WP_004143963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228597.1;locus_tag=LI478_RS01910;product=prepilin peptidase-dependent protein;protein_id=WP_004143963.1;transl_table=11 NZ_CP085478.1 RefSeq gene 388656 389207 . - . ID=gene-LI478_RS01915;Name=LI478_RS01915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS01915 NZ_CP085478.1 Protein Homology CDS 388656 389207 . - 0 ID=cds-WP_002915932.1;Parent=gene-LI478_RS01915;Dbxref=Genbank:WP_002915932.1;Name=WP_002915932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228598.1;locus_tag=LI478_RS01915;product=prepilin peptidase-dependent protein;protein_id=WP_002915932.1;transl_table=11 NZ_CP085478.1 RefSeq gene 389393 390187 . - . ID=gene-LI478_RS01920;Name=thyA;gbkey=Gene;gene=thyA;gene_biotype=protein_coding;locus_tag=LI478_RS01920 NZ_CP085478.1 Protein Homology CDS 389393 390187 . - 0 ID=cds-WP_002915933.1;Parent=gene-LI478_RS01920;Dbxref=Genbank:WP_002915933.1;Name=WP_002915933.1;Ontology_term=GO:0006231,GO:0004799;gbkey=CDS;gene=thyA;go_function=thymidylate synthase activity|0004799||IEA;go_process=dTMP biosynthetic process|0006231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123418.1;locus_tag=LI478_RS01920;product=thymidylate synthase;protein_id=WP_002915933.1;transl_table=11 NZ_CP085478.1 RefSeq gene 390194 391069 . - . ID=gene-LI478_RS01925;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=protein_coding;locus_tag=LI478_RS01925 NZ_CP085478.1 Protein Homology CDS 390194 391069 . - 0 ID=cds-WP_002915934.1;Parent=gene-LI478_RS01925;Dbxref=Genbank:WP_002915934.1;Name=WP_002915934.1;Ontology_term=GO:0009249,GO:0008961,GO:0016020;gbkey=CDS;gene=lgt;go_component=membrane|0016020||IEA;go_function=phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity|0008961||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228600.1;locus_tag=LI478_RS01925;product=prolipoprotein diacylglyceryl transferase;protein_id=WP_002915934.1;transl_table=11 NZ_CP085478.1 RefSeq gene 391315 393561 . - . ID=gene-LI478_RS01930;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=LI478_RS01930 NZ_CP085478.1 Protein Homology CDS 391315 393561 . - 0 ID=cds-WP_002915935.1;Parent=gene-LI478_RS01930;Dbxref=Genbank:WP_002915935.1;Name=WP_002915935.1;gbkey=CDS;gene=ptsP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228601.1;locus_tag=LI478_RS01930;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WP_002915935.1;transl_table=11 NZ_CP085478.1 RefSeq gene 393574 394104 . - . ID=gene-LI478_RS01935;Name=rppH;gbkey=Gene;gene=rppH;gene_biotype=protein_coding;locus_tag=LI478_RS01935 NZ_CP085478.1 Protein Homology CDS 393574 394104 . - 0 ID=cds-WP_002915936.1;Parent=gene-LI478_RS01935;Dbxref=Genbank:WP_002915936.1;Name=WP_002915936.1;Ontology_term=GO:0016787;gbkey=CDS;gene=rppH;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001655775.1;locus_tag=LI478_RS01935;product=RNA pyrophosphohydrolase;protein_id=WP_002915936.1;transl_table=11 NZ_CP085478.1 RefSeq gene 394558 394701 . + . ID=gene-LI478_RS01940;Name=LI478_RS01940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS01940 NZ_CP085478.1 Protein Homology CDS 394558 394701 . + 0 ID=cds-WP_004218186.1;Parent=gene-LI478_RS01940;Dbxref=Genbank:WP_004218186.1;Name=WP_004218186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228603.1;locus_tag=LI478_RS01940;product=hypothetical protein;protein_id=WP_004218186.1;transl_table=11 NZ_CP085478.1 RefSeq gene 394787 395482 . + . ID=gene-LI478_RS01945;Name=mutH;gbkey=Gene;gene=mutH;gene_biotype=protein_coding;locus_tag=LI478_RS01945 NZ_CP085478.1 Protein Homology CDS 394787 395482 . + 0 ID=cds-WP_004143967.1;Parent=gene-LI478_RS01945;Dbxref=Genbank:WP_004143967.1;Name=WP_004143967.1;Ontology_term=GO:0006304,GO:0004519;gbkey=CDS;gene=mutH;go_function=endonuclease activity|0004519||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228604.1;locus_tag=LI478_RS01945;product=DNA mismatch repair endonuclease MutH;protein_id=WP_004143967.1;transl_table=11 NZ_CP085478.1 RefSeq gene 395546 396259 . + . ID=gene-LI478_RS01950;Name=LI478_RS01950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS01950 NZ_CP085478.1 Protein Homology CDS 395546 396259 . + 0 ID=cds-WP_064153070.1;Parent=gene-LI478_RS01950;Dbxref=Genbank:WP_064153070.1;Name=WP_064153070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228605.1;locus_tag=LI478_RS01950;product=TerC family protein;protein_id=WP_064153070.1;transl_table=11 NZ_CP085478.1 RefSeq gene 396383 396601 . + . ID=gene-LI478_RS01955;Name=LI478_RS01955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS01955 NZ_CP085478.1 Protein Homology CDS 396383 396601 . + 0 ID=cds-WP_002915974.1;Parent=gene-LI478_RS01955;Dbxref=Genbank:WP_002915974.1;Name=WP_002915974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228606.1;locus_tag=LI478_RS01955;product=YgdI/YgdR family lipoprotein;protein_id=WP_002915974.1;transl_table=11 NZ_CP085478.1 RefSeq gene 396822 397862 . + . ID=gene-LI478_RS01960;Name=LI478_RS01960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS01960 NZ_CP085478.1 Protein Homology CDS 396822 397862 . + 0 ID=cds-WP_002915975.1;Parent=gene-LI478_RS01960;Dbxref=Genbank:WP_002915975.1;Name=WP_002915975.1;Ontology_term=GO:0047834;gbkey=CDS;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228607.1;locus_tag=LI478_RS01960;product=NADP(H)-dependent aldo-keto reductase;protein_id=WP_002915975.1;transl_table=11 NZ_CP085478.1 RefSeq gene 397966 399159 . - . ID=gene-LI478_RS01965;Name=lplT;gbkey=Gene;gene=lplT;gene_biotype=protein_coding;locus_tag=LI478_RS01965 NZ_CP085478.1 Protein Homology CDS 397966 399159 . - 0 ID=cds-WP_004185495.1;Parent=gene-LI478_RS01965;Dbxref=Genbank:WP_004185495.1;Name=WP_004185495.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=lplT;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228608.1;locus_tag=LI478_RS01965;product=lysophospholipid transporter LplT;protein_id=WP_004185495.1;transl_table=11 NZ_CP085478.1 RefSeq gene 399152 401311 . - . ID=gene-LI478_RS01970;Name=aas;gbkey=Gene;gene=aas;gene_biotype=protein_coding;locus_tag=LI478_RS01970 NZ_CP085478.1 Protein Homology CDS 399152 401311 . - 0 ID=cds-WP_020802360.1;Parent=gene-LI478_RS01970;Dbxref=Genbank:WP_020802360.1;Name=WP_020802360.1;Ontology_term=GO:0006631,GO:0008654,GO:0008779,GO:0008922;gbkey=CDS;gene=aas;go_function=acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase activity|0008779||IEA,long-chain fatty acid [acyl-carrier-protein] ligase activity|0008922||IEA;go_process=fatty acid metabolic process|0006631||IEA,phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228609.1;locus_tag=LI478_RS01970;product=bifunctional acyl-ACP--phospholipid O-acyltransferase/long-chain-fatty-acid--ACP ligase;protein_id=WP_020802360.1;transl_table=11 NZ_CP085478.1 RefSeq pseudogene 401575 401839 . - . ID=gene-LI478_RS01975;Name=LI478_RS01975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS01975;pseudo=true NZ_CP085478.1 Protein Homology CDS 401575 401839 . - 0 ID=cds-LI478_RS01975;Parent=gene-LI478_RS01975;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228610.1;locus_tag=LI478_RS01975;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP085478.1 RefSeq gene 401933 402949 . + . ID=gene-LI478_RS01980;Name=galR;gbkey=Gene;gene=galR;gene_biotype=protein_coding;locus_tag=LI478_RS01980 NZ_CP085478.1 Protein Homology CDS 401933 402949 . + 0 ID=cds-WP_002915981.1;Parent=gene-LI478_RS01980;Dbxref=Genbank:WP_002915981.1;Name=WP_002915981.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=galR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228611.1;locus_tag=LI478_RS01980;product=HTH-type transcriptional regulator GalR;protein_id=WP_002915981.1;transl_table=11 NZ_CP085478.1 RefSeq gene 402910 403389 . - . ID=gene-LI478_RS01985;Name=LI478_RS01985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS01985 NZ_CP085478.1 Protein Homology CDS 402910 403389 . - 0 ID=cds-WP_032433583.1;Parent=gene-LI478_RS01985;Dbxref=Genbank:WP_032433583.1;Name=WP_032433583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228612.1;locus_tag=LI478_RS01985;product=GNAT family N-acetyltransferase;protein_id=WP_032433583.1;transl_table=11 NZ_CP085478.1 RefSeq gene 403386 404159 . - . ID=gene-LI478_RS01990;Name=LI478_RS01990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS01990 NZ_CP085478.1 Protein Homology CDS 403386 404159 . - 0 ID=cds-WP_002915985.1;Parent=gene-LI478_RS01990;Dbxref=Genbank:WP_002915985.1;Name=WP_002915985.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228613.1;locus_tag=LI478_RS01990;product=GntR family transcriptional regulator;protein_id=WP_002915985.1;transl_table=11 NZ_CP085478.1 RefSeq gene 404227 405654 . - . ID=gene-LI478_RS01995;Name=LI478_RS01995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS01995 NZ_CP085478.1 Protein Homology CDS 404227 405654 . - 0 ID=cds-WP_064153069.1;Parent=gene-LI478_RS01995;Dbxref=Genbank:WP_064153069.1;Name=WP_064153069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228614.1;locus_tag=LI478_RS01995;product=glycoside hydrolase family 1 protein;protein_id=WP_064153069.1;transl_table=11 NZ_CP085478.1 RefSeq gene 405662 406999 . - . ID=gene-LI478_RS02000;Name=LI478_RS02000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02000 NZ_CP085478.1 Protein Homology CDS 405662 406999 . - 0 ID=cds-WP_004174520.1;Parent=gene-LI478_RS02000;Dbxref=Genbank:WP_004174520.1;Name=WP_004174520.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228615.1;locus_tag=LI478_RS02000;product=PTS transporter subunit EIIC;protein_id=WP_004174520.1;transl_table=11 NZ_CP085478.1 RefSeq gene 407299 408300 . + . ID=gene-LI478_RS02005;Name=LI478_RS02005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02005 NZ_CP085478.1 Protein Homology CDS 407299 408300 . + 0 ID=cds-WP_004229436.1;Parent=gene-LI478_RS02005;Dbxref=Genbank:WP_004229436.1;Name=WP_004229436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228616.1;locus_tag=LI478_RS02005;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_004229436.1;transl_table=11 NZ_CP085478.1 RefSeq gene 408293 409555 . - . ID=gene-LI478_RS02010;Name=lysA;gbkey=Gene;gene=lysA;gene_biotype=protein_coding;locus_tag=LI478_RS02010 NZ_CP085478.1 Protein Homology CDS 408293 409555 . - 0 ID=cds-WP_004181191.1;Parent=gene-LI478_RS02010;Dbxref=Genbank:WP_004181191.1;Name=WP_004181191.1;Ontology_term=GO:0009089,GO:0008836;gbkey=CDS;gene=lysA;go_function=diaminopimelate decarboxylase activity|0008836||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228617.1;locus_tag=LI478_RS02010;product=diaminopimelate decarboxylase;protein_id=WP_004181191.1;transl_table=11 NZ_CP085478.1 RefSeq gene 409693 410619 . + . ID=gene-LI478_RS02015;Name=LI478_RS02015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02015 NZ_CP085478.1 Protein Homology CDS 409693 410619 . + 0 ID=cds-WP_002915991.1;Parent=gene-LI478_RS02015;Dbxref=Genbank:WP_002915991.1;Name=WP_002915991.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228618.1;locus_tag=LI478_RS02015;product=LysR family transcriptional regulator;protein_id=WP_002915991.1;transl_table=11 NZ_CP085478.1 RefSeq gene 410585 411298 . - . ID=gene-LI478_RS02020;Name=LI478_RS02020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02020 NZ_CP085478.1 Protein Homology CDS 410585 411298 . - 0 ID=cds-WP_002915992.1;Parent=gene-LI478_RS02020;Dbxref=Genbank:WP_002915992.1;Name=WP_002915992.1;Ontology_term=GO:0006807,GO:0016855;gbkey=CDS;go_function=racemase and epimerase activity%2C acting on amino acids and derivatives|0016855||IEA;go_process=nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228619.1;locus_tag=LI478_RS02020;product=aspartate/glutamate racemase;protein_id=WP_002915992.1;transl_table=11 NZ_CP085478.1 RefSeq gene 411438 411764 . + . ID=gene-LI478_RS02025;Name=LI478_RS02025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02025 NZ_CP085478.1 Protein Homology CDS 411438 411764 . + 0 ID=cds-WP_002915993.1;Parent=gene-LI478_RS02025;Dbxref=Genbank:WP_002915993.1;Name=WP_002915993.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228620.1;locus_tag=LI478_RS02025;product=cupin domain-containing protein;protein_id=WP_002915993.1;transl_table=11 NZ_CP085478.1 RefSeq gene 412217 413107 . + . ID=gene-LI478_RS02030;Name=LI478_RS02030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02030 NZ_CP085478.1 Protein Homology CDS 412217 413107 . + 0 ID=cds-WP_002915995.1;Parent=gene-LI478_RS02030;Dbxref=Genbank:WP_002915995.1;Name=WP_002915995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228621.1;locus_tag=LI478_RS02030;product=sugar ABC transporter permease;protein_id=WP_002915995.1;transl_table=11 NZ_CP085478.1 RefSeq gene 413100 414002 . + . ID=gene-LI478_RS02035;Name=LI478_RS02035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02035 NZ_CP085478.1 Protein Homology CDS 413100 414002 . + 0 ID=cds-WP_002915996.1;Parent=gene-LI478_RS02035;Dbxref=Genbank:WP_002915996.1;Name=WP_002915996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228622.1;locus_tag=LI478_RS02035;product=carbohydrate ABC transporter permease;protein_id=WP_002915996.1;transl_table=11 NZ_CP085478.1 RefSeq gene 414015 415142 . + . ID=gene-LI478_RS02040;Name=LI478_RS02040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02040 NZ_CP085478.1 Protein Homology CDS 414015 415142 . + 0 ID=cds-WP_004211903.1;Parent=gene-LI478_RS02040;Dbxref=Genbank:WP_004211903.1;Name=WP_004211903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228623.1;locus_tag=LI478_RS02040;product=ABC transporter ATP-binding protein;protein_id=WP_004211903.1;transl_table=11 NZ_CP085478.1 RefSeq gene 415159 416445 . + . ID=gene-LI478_RS02045;Name=LI478_RS02045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02045 NZ_CP085478.1 Protein Homology CDS 415159 416445 . + 0 ID=cds-WP_009308582.1;Parent=gene-LI478_RS02045;Dbxref=Genbank:WP_009308582.1;Name=WP_009308582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228624.1;locus_tag=LI478_RS02045;product=ABC transporter substrate-binding protein;protein_id=WP_009308582.1;transl_table=11 NZ_CP085478.1 RefSeq gene 416505 417848 . - . ID=gene-LI478_RS02050;Name=LI478_RS02050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02050 NZ_CP085478.1 Protein Homology CDS 416505 417848 . - 0 ID=cds-WP_023285525.1;Parent=gene-LI478_RS02050;Dbxref=Genbank:WP_023285525.1;Name=WP_023285525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228625.1;locus_tag=LI478_RS02050;product=carbohydrate porin;protein_id=WP_023285525.1;transl_table=11 NZ_CP085478.1 RefSeq gene 417970 419403 . - . ID=gene-LI478_RS02055;Name=LI478_RS02055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02055 NZ_CP085478.1 Protein Homology CDS 417970 419403 . - 0 ID=cds-WP_026005853.1;Parent=gene-LI478_RS02055;Dbxref=Genbank:WP_026005853.1;Name=WP_026005853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228626.1;locus_tag=LI478_RS02055;product=glycoside hydrolase family 32 protein;protein_id=WP_026005853.1;transl_table=11 NZ_CP085478.1 RefSeq gene 419423 420664 . - . ID=gene-LI478_RS02060;Name=LI478_RS02060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02060 NZ_CP085478.1 Protein Homology CDS 419423 420664 . - 0 ID=cds-WP_002916000.1;Parent=gene-LI478_RS02060;Dbxref=Genbank:WP_002916000.1;Name=WP_002916000.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228627.1;locus_tag=LI478_RS02060;product=MFS transporter;protein_id=WP_002916000.1;transl_table=11 NZ_CP085478.1 RefSeq gene 420677 420811 . - . ID=gene-LI478_RS02065;Name=LI478_RS02065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02065 NZ_CP085478.1 Protein Homology CDS 420677 420811 . - 0 ID=cds-WP_004143987.1;Parent=gene-LI478_RS02065;Dbxref=Genbank:WP_004143987.1;Name=WP_004143987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228628.1;locus_tag=LI478_RS02065;product=hypothetical protein;protein_id=WP_004143987.1;transl_table=11 NZ_CP085478.1 RefSeq gene 420906 421901 . + . ID=gene-LI478_RS02070;Name=LI478_RS02070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02070 NZ_CP085478.1 Protein Homology CDS 420906 421901 . + 0 ID=cds-WP_004149647.1;Parent=gene-LI478_RS02070;Dbxref=Genbank:WP_004149647.1;Name=WP_004149647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228629.1;locus_tag=LI478_RS02070;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_004149647.1;transl_table=11 NZ_CP085478.1 RefSeq gene 421898 423319 . - . ID=gene-LI478_RS02075;Name=LI478_RS02075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02075 NZ_CP085478.1 Protein Homology CDS 421898 423319 . - 0 ID=cds-WP_002916001.1;Parent=gene-LI478_RS02075;Dbxref=Genbank:WP_002916001.1;Name=WP_002916001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004149648.1;locus_tag=LI478_RS02075;product=sugar porter family MFS transporter;protein_id=WP_002916001.1;transl_table=11 NZ_CP085478.1 RefSeq gene 423615 424376 . - . ID=gene-LI478_RS02080;Name=kduD;gbkey=Gene;gene=kduD;gene_biotype=protein_coding;locus_tag=LI478_RS02080 NZ_CP085478.1 Protein Homology CDS 423615 424376 . - 0 ID=cds-WP_002916003.1;Parent=gene-LI478_RS02080;Dbxref=Genbank:WP_002916003.1;Name=WP_002916003.1;Ontology_term=GO:0000272,GO:0008678,GO:0016491,GO:0051287;gbkey=CDS;gene=kduD;go_function=2-deoxy-D-gluconate 3-dehydrogenase activity|0008678||IEA,oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228631.1;locus_tag=LI478_RS02080;product=2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD;protein_id=WP_002916003.1;transl_table=11 NZ_CP085478.1 RefSeq gene 424587 424718 . + . ID=gene-LI478_RS26435;Name=LI478_RS26435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS26435 NZ_CP085478.1 GeneMarkS-2+ CDS 424587 424718 . + 0 ID=cds-WP_004154563.1;Parent=gene-LI478_RS26435;Dbxref=Genbank:WP_004154563.1;Name=WP_004154563.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LI478_RS26435;product=hypothetical protein;protein_id=WP_004154563.1;transl_table=11 NZ_CP085478.1 RefSeq gene 424862 426037 . + . ID=gene-LI478_RS02085;Name=LI478_RS02085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02085 NZ_CP085478.1 Protein Homology CDS 424862 426037 . + 0 ID=cds-WP_002916048.1;Parent=gene-LI478_RS02085;Dbxref=Genbank:WP_002916048.1;Name=WP_002916048.1;Ontology_term=GO:0045490,GO:0047487;gbkey=CDS;go_function=oligogalacturonide lyase activity|0047487||IEA;go_process=pectin catabolic process|0045490||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228633.1;locus_tag=LI478_RS02085;product=oligogalacturonate lyase family protein;protein_id=WP_002916048.1;transl_table=11 NZ_CP085478.1 RefSeq gene 426173 426868 . - . ID=gene-LI478_RS02090;Name=ompK26;gbkey=Gene;gene=ompK26;gene_biotype=protein_coding;locus_tag=LI478_RS02090 NZ_CP085478.1 Protein Homology CDS 426173 426868 . - 0 ID=cds-WP_002916050.1;Parent=gene-LI478_RS02090;Dbxref=Genbank:WP_002916050.1;Name=WP_002916050.1;gbkey=CDS;gene=ompK26;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228634.1;locus_tag=LI478_RS02090;product=KdgM family porin OmpK26;protein_id=WP_002916050.1;transl_table=11 NZ_CP085478.1 RefSeq gene 427117 428295 . - . ID=gene-LI478_RS02095;Name=LI478_RS02095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02095 NZ_CP085478.1 Protein Homology CDS 427117 428295 . - 0 ID=cds-WP_002916052.1;Parent=gene-LI478_RS02095;Dbxref=Genbank:WP_002916052.1;Name=WP_002916052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228635.1;locus_tag=LI478_RS02095;product=acetyl-CoA C-acetyltransferase;protein_id=WP_002916052.1;transl_table=11 NZ_CP085478.1 RefSeq gene 428414 429283 . - . ID=gene-LI478_RS02100;Name=LI478_RS02100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02100 NZ_CP085478.1 Protein Homology CDS 428414 429283 . - 0 ID=cds-WP_002916055.1;Parent=gene-LI478_RS02100;Dbxref=Genbank:WP_002916055.1;Name=WP_002916055.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228636.1;locus_tag=LI478_RS02100;product=LysR family transcriptional regulator;protein_id=WP_002916055.1;transl_table=11 NZ_CP085478.1 RefSeq gene 429386 429847 . + . ID=gene-LI478_RS02105;Name=LI478_RS02105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02105 NZ_CP085478.1 Protein Homology CDS 429386 429847 . + 0 ID=cds-WP_002916056.1;Parent=gene-LI478_RS02105;Dbxref=Genbank:WP_002916056.1;Name=WP_002916056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228637.1;locus_tag=LI478_RS02105;product=multidrug/biocide efflux PACE transporter;protein_id=WP_002916056.1;transl_table=11 NZ_CP085478.1 RefSeq gene 429971 431200 . + . ID=gene-LI478_RS02110;Name=LI478_RS02110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02110 NZ_CP085478.1 Protein Homology CDS 429971 431200 . + 0 ID=cds-WP_064153068.1;Parent=gene-LI478_RS02110;Dbxref=Genbank:WP_064153068.1;Name=WP_064153068.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004205392.1;locus_tag=LI478_RS02110;product=amino acid permease;protein_id=WP_064153068.1;transl_table=11 NZ_CP085478.1 RefSeq gene 431319 432197 . + . ID=gene-LI478_RS02115;Name=LI478_RS02115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02115 NZ_CP085478.1 Protein Homology CDS 431319 432197 . + 0 ID=cds-WP_002916061.1;Parent=gene-LI478_RS02115;Dbxref=Genbank:WP_002916061.1;Name=WP_002916061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228639.1;locus_tag=LI478_RS02115;product=aldo/keto reductase family oxidoreductase;protein_id=WP_002916061.1;transl_table=11 NZ_CP085478.1 RefSeq gene 432580 433284 . + . ID=gene-LI478_RS02120;Name=mrkH;gbkey=Gene;gene=mrkH;gene_biotype=protein_coding;locus_tag=LI478_RS02120 NZ_CP085478.1 Protein Homology CDS 432580 433284 . + 0 ID=cds-WP_004152886.1;Parent=gene-LI478_RS02120;Dbxref=Genbank:WP_004152886.1;Name=WP_004152886.1;gbkey=CDS;gene=mrkH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228640.1;locus_tag=LI478_RS02120;product=transcriptional activator MrkH;protein_id=WP_004152886.1;transl_table=11 NZ_CP085478.1 RefSeq gene 433302 433874 . + . ID=gene-LI478_RS02125;Name=mrkI;gbkey=Gene;gene=mrkI;gene_biotype=protein_coding;locus_tag=LI478_RS02125 NZ_CP085478.1 Protein Homology CDS 433302 433874 . + 0 ID=cds-WP_002916079.1;Parent=gene-LI478_RS02125;Dbxref=Genbank:WP_002916079.1;Name=WP_002916079.1;gbkey=CDS;gene=mrkI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228641.1;locus_tag=LI478_RS02125;product=transcriptional regulator MrkI;protein_id=WP_002916079.1;transl_table=11 NZ_CP085478.1 RefSeq gene 434018 434734 . + . ID=gene-LI478_RS02130;Name=mkrJ;gbkey=Gene;gene=mkrJ;gene_biotype=protein_coding;locus_tag=LI478_RS02130 NZ_CP085478.1 Protein Homology CDS 434018 434734 . + 0 ID=cds-WP_023287971.1;Parent=gene-LI478_RS02130;Dbxref=Genbank:WP_023287971.1;Name=WP_023287971.1;gbkey=CDS;gene=mkrJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228642.1;locus_tag=LI478_RS02130;product=phosphodiesterase MrkJ;protein_id=WP_023287971.1;transl_table=11 NZ_CP085478.1 RefSeq gene 434769 435404 . - . ID=gene-LI478_RS02135;Name=mrkF;gbkey=Gene;gene=mrkF;gene_biotype=protein_coding;locus_tag=LI478_RS02135 NZ_CP085478.1 Protein Homology CDS 434769 435404 . - 0 ID=cds-WP_023287972.1;Parent=gene-LI478_RS02135;Dbxref=Genbank:WP_023287972.1;Name=WP_023287972.1;gbkey=CDS;gene=mrkF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228643.1;locus_tag=LI478_RS02135;product=type 3 fimbria minor subunit MrkF;protein_id=WP_023287972.1;transl_table=11 NZ_CP085478.1 RefSeq gene 435418 436413 . - . ID=gene-LI478_RS02140;Name=mrkD;gbkey=Gene;gene=mrkD;gene_biotype=protein_coding;locus_tag=LI478_RS02140 NZ_CP085478.1 Protein Homology CDS 435418 436413 . - 0 ID=cds-WP_002916123.1;Parent=gene-LI478_RS02140;Dbxref=Genbank:WP_002916123.1;Name=WP_002916123.1;gbkey=CDS;gene=mrkD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228644.1;locus_tag=LI478_RS02140;product=type 3 fimbria adhesin subunit MrkD;protein_id=WP_002916123.1;transl_table=11 NZ_CP085478.1 RefSeq gene 436404 438890 . - . ID=gene-LI478_RS02145;Name=mrkC;gbkey=Gene;gene=mrkC;gene_biotype=protein_coding;locus_tag=LI478_RS02145 NZ_CP085478.1 Protein Homology CDS 436404 438890 . - 0 ID=cds-WP_000813718.1;Parent=gene-LI478_RS02145;Dbxref=Genbank:WP_000813718.1;Name=WP_000813718.1;gbkey=CDS;gene=mrkC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228645.1;locus_tag=LI478_RS02145;product=type 3 fimbria usher protein MrkC;protein_id=WP_000813718.1;transl_table=11 NZ_CP085478.1 RefSeq gene 438902 439603 . - . ID=gene-LI478_RS02150;Name=mrkB;gbkey=Gene;gene=mrkB;gene_biotype=protein_coding;locus_tag=LI478_RS02150 NZ_CP085478.1 Protein Homology CDS 438902 439603 . - 0 ID=cds-WP_000820818.1;Parent=gene-LI478_RS02150;Dbxref=Genbank:WP_000820818.1;Name=WP_000820818.1;gbkey=CDS;gene=mrkB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004211921.1;locus_tag=LI478_RS02150;product=type 3 fimbria chaperone MrkB;protein_id=WP_000820818.1;transl_table=11 NZ_CP085478.1 RefSeq gene 439699 440307 . - . ID=gene-LI478_RS02155;Name=mrkA;gbkey=Gene;gene=mrkA;gene_biotype=protein_coding;locus_tag=LI478_RS02155 NZ_CP085478.1 Protein Homology CDS 439699 440307 . - 0 ID=cds-WP_000756959.1;Parent=gene-LI478_RS02155;Dbxref=Genbank:WP_000756959.1;Name=WP_000756959.1;gbkey=CDS;gene=mrkA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228647.1;locus_tag=LI478_RS02155;product=type 3 fimbria major subunit MrkA;protein_id=WP_000756959.1;transl_table=11 NZ_CP085478.1 RefSeq gene 441013 441222 . + . ID=gene-LI478_RS02160;Name=LI478_RS02160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02160 NZ_CP085478.1 Protein Homology CDS 441013 441222 . + 0 ID=cds-WP_002916131.1;Parent=gene-LI478_RS02160;Dbxref=Genbank:WP_002916131.1;Name=WP_002916131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228648.1;locus_tag=LI478_RS02160;product=DUF1471 domain-containing protein;protein_id=WP_002916131.1;transl_table=11 NZ_CP085478.1 RefSeq gene 441318 442214 . - . ID=gene-LI478_RS02165;Name=LI478_RS02165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02165 NZ_CP085478.1 Protein Homology CDS 441318 442214 . - 0 ID=cds-WP_023287973.1;Parent=gene-LI478_RS02165;Dbxref=Genbank:WP_023287973.1;Name=WP_023287973.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228649.1;locus_tag=LI478_RS02165;product=EamA family transporter;protein_id=WP_023287973.1;transl_table=11 NZ_CP085478.1 RefSeq gene 442296 442802 . + . ID=gene-LI478_RS02170;Name=LI478_RS02170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02170 NZ_CP085478.1 Protein Homology CDS 442296 442802 . + 0 ID=cds-WP_023287974.1;Parent=gene-LI478_RS02170;Dbxref=Genbank:WP_023287974.1;Name=WP_023287974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228650.1;locus_tag=LI478_RS02170;product=MarR family transcriptional regulator;protein_id=WP_023287974.1;transl_table=11 NZ_CP085478.1 RefSeq gene 442799 443755 . - . ID=gene-LI478_RS02175;Name=LI478_RS02175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02175 NZ_CP085478.1 Protein Homology CDS 442799 443755 . - 0 ID=cds-WP_004889905.1;Parent=gene-LI478_RS02175;Dbxref=Genbank:WP_004889905.1;Name=WP_004889905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228651.1;locus_tag=LI478_RS02175;product=nickel/cobalt transporter;protein_id=WP_004889905.1;transl_table=11 NZ_CP085478.1 RefSeq gene 444971 445576 . + . ID=gene-LI478_RS02180;Name=fimB;gbkey=Gene;gene=fimB;gene_biotype=protein_coding;locus_tag=LI478_RS02180 NZ_CP085478.1 Protein Homology CDS 444971 445576 . + 0 ID=cds-WP_004151951.1;Parent=gene-LI478_RS02180;Dbxref=Genbank:WP_004151951.1;Name=WP_004151951.1;gbkey=CDS;gene=fimB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875142.1;locus_tag=LI478_RS02180;product=type 1 fimbria switch DNA invertase FimB;protein_id=WP_004151951.1;transl_table=11 NZ_CP085478.1 RefSeq gene 446042 446650 . + . ID=gene-LI478_RS02185;Name=fimE;gbkey=Gene;gene=fimE;gene_biotype=protein_coding;locus_tag=LI478_RS02185 NZ_CP085478.1 Protein Homology CDS 446042 446650 . + 0 ID=cds-WP_002916189.1;Parent=gene-LI478_RS02185;Dbxref=Genbank:WP_002916189.1;Name=WP_002916189.1;Note=upgraded from regulatory protein to switch DNA invertase;gbkey=CDS;gene=fimE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228653.1;locus_tag=LI478_RS02185;product=type 1 fimbria switch DNA invertase FimE;protein_id=WP_002916189.1;transl_table=11 NZ_CP085478.1 RefSeq gene 447131 447679 . + . ID=gene-LI478_RS02190;Name=fimA;gbkey=Gene;gene=fimA;gene_biotype=protein_coding;locus_tag=LI478_RS02190 NZ_CP085478.1 Protein Homology CDS 447131 447679 . + 0 ID=cds-WP_002916190.1;Parent=gene-LI478_RS02190;Dbxref=Genbank:WP_002916190.1;Name=WP_002916190.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=fimA;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228655.1;locus_tag=LI478_RS02190;product=type 1 fimbrial major subunit FimA;protein_id=WP_002916190.1;transl_table=11 NZ_CP085478.1 RefSeq gene 447750 448286 . + . ID=gene-LI478_RS02195;Name=LI478_RS02195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02195 NZ_CP085478.1 Protein Homology CDS 447750 448286 . + 0 ID=cds-WP_004174507.1;Parent=gene-LI478_RS02195;Dbxref=Genbank:WP_004174507.1;Name=WP_004174507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228656.1;locus_tag=LI478_RS02195;product=fimbrial protein;protein_id=WP_004174507.1;transl_table=11 NZ_CP085478.1 RefSeq gene 448315 449040 . + . ID=gene-LI478_RS02200;Name=LI478_RS02200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02200 NZ_CP085478.1 Protein Homology CDS 448315 449040 . + 0 ID=cds-WP_085353234.1;Parent=gene-LI478_RS02200;Dbxref=Genbank:WP_085353234.1;Name=WP_085353234.1;Ontology_term=GO:0071555,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016161785.1;locus_tag=LI478_RS02200;product=fimbria/pilus periplasmic chaperone;protein_id=WP_085353234.1;transl_table=11 NZ_CP085478.1 RefSeq gene 449122 451734 . + . ID=gene-LI478_RS02205;Name=LI478_RS02205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02205 NZ_CP085478.1 Protein Homology CDS 449122 451734 . + 0 ID=cds-WP_009308599.1;Parent=gene-LI478_RS02205;Dbxref=Genbank:WP_009308599.1;Name=WP_009308599.1;Ontology_term=GO:0009297,GO:0005515,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA,fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228658.1;locus_tag=LI478_RS02205;product=fimbrial biogenesis usher protein;protein_id=WP_009308599.1;transl_table=11 NZ_CP085478.1 RefSeq gene 451745 452272 . + . ID=gene-LI478_RS02210;Name=LI478_RS02210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02210 NZ_CP085478.1 Protein Homology CDS 451745 452272 . + 0 ID=cds-WP_019705553.1;Parent=gene-LI478_RS02210;Dbxref=Genbank:WP_019705553.1;Name=WP_019705553.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228659.1;locus_tag=LI478_RS02210;product=fimbrial protein;protein_id=WP_019705553.1;transl_table=11 NZ_CP085478.1 RefSeq gene 452300 452785 . + . ID=gene-LI478_RS02215;Name=LI478_RS02215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02215 NZ_CP085478.1 Protein Homology CDS 452300 452785 . + 0 ID=cds-WP_004229447.1;Parent=gene-LI478_RS02215;Dbxref=Genbank:WP_004229447.1;Name=WP_004229447.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228660.1;locus_tag=LI478_RS02215;product=fimbrial protein;protein_id=WP_004229447.1;transl_table=11 NZ_CP085478.1 RefSeq gene 452803 453705 . + . ID=gene-LI478_RS02220;Name=LI478_RS02220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02220 NZ_CP085478.1 Protein Homology CDS 452803 453705 . + 0 ID=cds-WP_024264619.1;Parent=gene-LI478_RS02220;Dbxref=Genbank:WP_024264619.1;Name=WP_024264619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313306.1;locus_tag=LI478_RS02220;product=fimbrial protein;protein_id=WP_024264619.1;transl_table=11 NZ_CP085478.1 RefSeq gene 453702 455114 . + . ID=gene-LI478_RS02225;Name=LI478_RS02225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02225 NZ_CP085478.1 Protein Homology CDS 453702 455114 . + 0 ID=cds-WP_023287976.1;Parent=gene-LI478_RS02225;Dbxref=Genbank:WP_023287976.1;Name=WP_023287976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004889889.1;locus_tag=LI478_RS02225;product=EAL domain-containing protein;protein_id=WP_023287976.1;transl_table=11 NZ_CP085478.1 RefSeq gene 455157 455429 . - . ID=gene-LI478_RS02230;Name=LI478_RS02230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02230 NZ_CP085478.1 Protein Homology CDS 455157 455429 . - 0 ID=cds-WP_002916201.1;Parent=gene-LI478_RS02230;Dbxref=Genbank:WP_002916201.1;Name=WP_002916201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228663.1;locus_tag=LI478_RS02230;product=GNAT family N-acetyltransferase;protein_id=WP_002916201.1;transl_table=11 NZ_CP085478.1 RefSeq gene 455441 455671 . - . ID=gene-LI478_RS02235;Name=LI478_RS02235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02235 NZ_CP085478.1 Protein Homology CDS 455441 455671 . - 0 ID=cds-WP_002916202.1;Parent=gene-LI478_RS02235;Dbxref=Genbank:WP_002916202.1;Name=WP_002916202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313135.1;locus_tag=LI478_RS02235;product=(4Fe-4S)-binding protein;protein_id=WP_002916202.1;transl_table=11 NZ_CP085478.1 RefSeq gene 455877 456149 . + . ID=gene-LI478_RS02240;Name=LI478_RS02240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02240 NZ_CP085478.1 Protein Homology CDS 455877 456149 . + 0 ID=cds-WP_002916204.1;Parent=gene-LI478_RS02240;Dbxref=Genbank:WP_002916204.1;Name=WP_002916204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228665.1;locus_tag=LI478_RS02240;product=YtcA family lipoprotein;protein_id=WP_002916204.1;transl_table=11 NZ_CP085478.1 RefSeq gene 456156 457181 . + . ID=gene-LI478_RS02245;Name=mdtN;gbkey=Gene;gene=mdtN;gene_biotype=protein_coding;locus_tag=LI478_RS02245 NZ_CP085478.1 Protein Homology CDS 456156 457181 . + 0 ID=cds-WP_004174502.1;Parent=gene-LI478_RS02245;Dbxref=Genbank:WP_004174502.1;Name=WP_004174502.1;gbkey=CDS;gene=mdtN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228666.1;locus_tag=LI478_RS02245;product=multidrug transporter subunit MdtN;protein_id=WP_004174502.1;transl_table=11 NZ_CP085478.1 RefSeq gene 457194 459131 . + . ID=gene-LI478_RS02250;Name=mdtO;gbkey=Gene;gene=mdtO;gene_biotype=protein_coding;locus_tag=LI478_RS02250 NZ_CP085478.1 Protein Homology CDS 457194 459131 . + 0 ID=cds-WP_023285535.1;Parent=gene-LI478_RS02250;Dbxref=Genbank:WP_023285535.1;Name=WP_023285535.1;gbkey=CDS;gene=mdtO;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228667.1;locus_tag=LI478_RS02250;product=multidrug efflux transporter permease subunit MdtO;protein_id=WP_023285535.1;transl_table=11 NZ_CP085478.1 RefSeq gene 459128 460576 . + . ID=gene-LI478_RS02255;Name=LI478_RS02255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02255 NZ_CP085478.1 Protein Homology CDS 459128 460576 . + 0 ID=cds-WP_002916272.1;Parent=gene-LI478_RS02255;Dbxref=Genbank:WP_002916272.1;Name=WP_002916272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228668.1;locus_tag=LI478_RS02255;product=MdtP family multidrug efflux transporter outer membrane subunit;protein_id=WP_002916272.1;transl_table=11 NZ_CP085478.1 RefSeq gene 461044 461343 . - . ID=gene-LI478_RS02260;Name=LI478_RS02260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02260 NZ_CP085478.1 Protein Homology CDS 461044 461343 . - 0 ID=cds-WP_002916274.1;Parent=gene-LI478_RS02260;Dbxref=Genbank:WP_002916274.1;Name=WP_002916274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228669.1;locus_tag=LI478_RS02260;product=DUF1889 family protein;protein_id=WP_002916274.1;transl_table=11 NZ_CP085478.1 RefSeq gene 461527 463080 . - . ID=gene-LI478_RS02265;Name=LI478_RS02265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02265 NZ_CP085478.1 Protein Homology CDS 461527 463080 . - 0 ID=cds-WP_002916277.1;Parent=gene-LI478_RS02265;Dbxref=Genbank:WP_002916277.1;Name=WP_002916277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228670.1;locus_tag=LI478_RS02265;product=peptide MFS transporter;protein_id=WP_002916277.1;transl_table=11 NZ_CP085478.1 RefSeq gene 463553 463975 . - . ID=gene-LI478_RS02270;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=protein_coding;locus_tag=LI478_RS02270 NZ_CP085478.1 Protein Homology CDS 463553 463975 . - 0 ID=cds-WP_004181224.1;Parent=gene-LI478_RS02270;Dbxref=Genbank:WP_004181224.1;Name=WP_004181224.1;Ontology_term=GO:0008794;gbkey=CDS;gene=arsC;go_function=arsenate reductase (glutaredoxin) activity|0008794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228671.1;locus_tag=LI478_RS02270;product=glutaredoxin-dependent arsenate reductase;protein_id=WP_004181224.1;transl_table=11 NZ_CP085478.1 RefSeq gene 463985 465277 . - . ID=gene-LI478_RS02275;Name=LI478_RS02275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02275 NZ_CP085478.1 Protein Homology CDS 463985 465277 . - 0 ID=cds-WP_004900421.1;Parent=gene-LI478_RS02275;Dbxref=Genbank:WP_004900421.1;Name=WP_004900421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228672.1;locus_tag=LI478_RS02275;product=arsenic transporter;protein_id=WP_004900421.1;transl_table=11 NZ_CP085478.1 RefSeq gene 465329 465658 . - . ID=gene-LI478_RS02280;Name=LI478_RS02280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02280 NZ_CP085478.1 Protein Homology CDS 465329 465658 . - 0 ID=cds-WP_002916281.1;Parent=gene-LI478_RS02280;Dbxref=Genbank:WP_002916281.1;Name=WP_002916281.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228673.1;locus_tag=LI478_RS02280;product=metalloregulator ArsR/SmtB family transcription factor;protein_id=WP_002916281.1;transl_table=11 NZ_CP085478.1 RefSeq pseudogene 465877 466169 . + . ID=gene-LI478_RS02285;Name=LI478_RS02285;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS02285;pseudo=true NZ_CP085478.1 Protein Homology CDS 465877 466169 . + 0 ID=cds-LI478_RS02285;Parent=gene-LI478_RS02285;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228674.1;locus_tag=LI478_RS02285;product=YciI family protein;pseudo=true;transl_table=11 NZ_CP085478.1 RefSeq gene 466200 466772 . + . ID=gene-LI478_RS02290;Name=LI478_RS02290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02290 NZ_CP085478.1 Protein Homology CDS 466200 466772 . + 0 ID=cds-WP_032415532.1;Parent=gene-LI478_RS02290;Dbxref=Genbank:WP_032415532.1;Name=WP_032415532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228675.1;locus_tag=LI478_RS02290;product=DUF1349 domain-containing protein;protein_id=WP_032415532.1;transl_table=11 NZ_CP085478.1 RefSeq gene 466851 467054 . + . ID=gene-LI478_RS02295;Name=LI478_RS02295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02295 NZ_CP085478.1 Protein Homology CDS 466851 467054 . + 0 ID=cds-WP_014599254.1;Parent=gene-LI478_RS02295;Dbxref=Genbank:WP_014599254.1;Name=WP_014599254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014599254.1;locus_tag=LI478_RS02295;product=hypothetical protein;protein_id=WP_014599254.1;transl_table=11 NZ_CP085478.1 RefSeq gene 467223 468122 . - . ID=gene-LI478_RS02300;Name=LI478_RS02300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02300 NZ_CP085478.1 Protein Homology CDS 467223 468122 . - 0 ID=cds-WP_004174493.1;Parent=gene-LI478_RS02300;Dbxref=Genbank:WP_004174493.1;Name=WP_004174493.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014906955.1;locus_tag=LI478_RS02300;product=LysR family transcriptional regulator;protein_id=WP_004174493.1;transl_table=11 NZ_CP085478.1 RefSeq gene 468261 468569 . + . ID=gene-LI478_RS02305;Name=LI478_RS02305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02305 NZ_CP085478.1 Protein Homology CDS 468261 468569 . + 0 ID=cds-WP_004151785.1;Parent=gene-LI478_RS02305;Dbxref=Genbank:WP_004151785.1;Name=WP_004151785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228677.1;locus_tag=LI478_RS02305;product=superoxide dismutase;protein_id=WP_004151785.1;transl_table=11 NZ_CP085478.1 RefSeq gene 468578 469135 . + . ID=gene-LI478_RS02310;Name=LI478_RS02310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02310 NZ_CP085478.1 Protein Homology CDS 468578 469135 . + 0 ID=cds-WP_004181226.1;Parent=gene-LI478_RS02310;Dbxref=Genbank:WP_004181226.1;Name=WP_004181226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228678.1;locus_tag=LI478_RS02310;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_004181226.1;transl_table=11 NZ_CP085478.1 RefSeq gene 469156 470175 . + . ID=gene-LI478_RS02315;Name=LI478_RS02315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02315 NZ_CP085478.1 Protein Homology CDS 469156 470175 . + 0 ID=cds-WP_032415533.1;Parent=gene-LI478_RS02315;Dbxref=Genbank:WP_032415533.1;Name=WP_032415533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228679.1;locus_tag=LI478_RS02315;product=aldo/keto reductase;protein_id=WP_032415533.1;transl_table=11 NZ_CP085478.1 RefSeq gene 470208 471011 . + . ID=gene-LI478_RS02320;Name=LI478_RS02320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02320 NZ_CP085478.1 Protein Homology CDS 470208 471011 . + 0 ID=cds-WP_064153066.1;Parent=gene-LI478_RS02320;Dbxref=Genbank:WP_064153066.1;Name=WP_064153066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228680.1;locus_tag=LI478_RS02320;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_064153066.1;transl_table=11 NZ_CP085478.1 RefSeq gene 471375 472304 . - . ID=gene-LI478_RS02325;Name=LI478_RS02325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02325 NZ_CP085478.1 Protein Homology CDS 471375 472304 . - 0 ID=cds-WP_023287980.1;Parent=gene-LI478_RS02325;Dbxref=Genbank:WP_023287980.1;Name=WP_023287980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228681.1;locus_tag=LI478_RS02325;product=LysR family transcriptional regulator;protein_id=WP_023287980.1;transl_table=11 NZ_CP085478.1 RefSeq gene 472434 473822 . + . ID=gene-LI478_RS02330;Name=LI478_RS02330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02330 NZ_CP085478.1 Protein Homology CDS 472434 473822 . + 0 ID=cds-WP_032415534.1;Parent=gene-LI478_RS02330;Dbxref=Genbank:WP_032415534.1;Name=WP_032415534.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228682.1;locus_tag=LI478_RS02330;product=MFS transporter;protein_id=WP_032415534.1;transl_table=11 NZ_CP085478.1 RefSeq gene 473990 474063 . - . ID=gene-LI478_RS02335;Name=LI478_RS02335;gbkey=Gene;gene_biotype=tRNA;locus_tag=LI478_RS02335 NZ_CP085478.1 tRNAscan-SE tRNA 473990 474063 . - . ID=rna-LI478_RS02335;Parent=gene-LI478_RS02335;anticodon=(pos:complement(474029..474031));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS02335;product=tRNA-Gly NZ_CP085478.1 tRNAscan-SE exon 473990 474063 . - . ID=exon-LI478_RS02335-1;Parent=rna-LI478_RS02335;anticodon=(pos:complement(474029..474031));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS02335;product=tRNA-Gly NZ_CP085478.1 RefSeq gene 474144 474857 . - . ID=gene-LI478_RS02340;Name=actS;gbkey=Gene;gene=actS;gene_biotype=protein_coding;locus_tag=LI478_RS02340 NZ_CP085478.1 Protein Homology CDS 474144 474857 . - 0 ID=cds-WP_032415535.1;Parent=gene-LI478_RS02340;Dbxref=Genbank:WP_032415535.1;Name=WP_032415535.1;gbkey=CDS;gene=actS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228683.1;locus_tag=LI478_RS02340;product=amidase activator ActS;protein_id=WP_032415535.1;transl_table=11 NZ_CP085478.1 RefSeq gene 475174 475728 . + . ID=gene-LI478_RS02345;Name=idi;gbkey=Gene;gene=idi;gene_biotype=protein_coding;locus_tag=LI478_RS02345 NZ_CP085478.1 Protein Homology CDS 475174 475728 . + 0 ID=cds-WP_023285541.1;Parent=gene-LI478_RS02345;Dbxref=Genbank:WP_023285541.1;Name=WP_023285541.1;Ontology_term=GO:0008299,GO:0004452;gbkey=CDS;gene=idi;go_function=isopentenyl-diphosphate delta-isomerase activity|0004452||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228685.1;locus_tag=LI478_RS02345;product=isopentenyl-diphosphate Delta-isomerase;protein_id=WP_023285541.1;transl_table=11 NZ_CP085478.1 RefSeq gene 475963 477480 . - . ID=gene-LI478_RS02350;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=LI478_RS02350 NZ_CP085478.1 Protein Homology CDS 475963 477480 . - 0 ID=cds-WP_002916299.1;Parent=gene-LI478_RS02350;Dbxref=Genbank:WP_002916299.1;Name=WP_002916299.1;Ontology_term=GO:0006430,GO:0004824,GO:0005737;gbkey=CDS;gene=lysS;go_component=cytoplasm|0005737||IEA;go_function=lysine-tRNA ligase activity|0004824||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001740376.1;locus_tag=LI478_RS02350;product=lysine--tRNA ligase;protein_id=WP_002916299.1;transl_table=11 NZ_CP085478.1 RefSeq gene 477490 478588 . - . ID=gene-LI478_RS02355;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;locus_tag=LI478_RS02355 NZ_CP085478.1 Protein Homology CDS 478514 478588 . - 0 ID=cds-WP_095858446.1;Parent=gene-LI478_RS02355;Dbxref=Genbank:WP_095858446.1;Name=WP_095858446.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0003747;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311790.1;locus_tag=LI478_RS02355;product=peptide chain release factor 2;protein_id=WP_095858446.1;transl_table=11 NZ_CP085478.1 Protein Homology CDS 477490 478512 . - 0 ID=cds-WP_095858446.1;Parent=gene-LI478_RS02355;Dbxref=Genbank:WP_095858446.1;Name=WP_095858446.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0003747;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311790.1;locus_tag=LI478_RS02355;product=peptide chain release factor 2;protein_id=WP_095858446.1;transl_table=11 NZ_CP085478.1 RefSeq gene 478674 480407 . - . ID=gene-LI478_RS02360;Name=recJ;gbkey=Gene;gene=recJ;gene_biotype=protein_coding;locus_tag=LI478_RS02360 NZ_CP085478.1 Protein Homology CDS 478674 480407 . - 0 ID=cds-WP_004149758.1;Parent=gene-LI478_RS02360;Dbxref=Genbank:WP_004149758.1;Name=WP_004149758.1;Ontology_term=GO:0006281,GO:0006310,GO:0008409;gbkey=CDS;gene=recJ;go_function=5'-3' exonuclease activity|0008409||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228688.1;locus_tag=LI478_RS02360;product=single-stranded-DNA-specific exonuclease RecJ;protein_id=WP_004149758.1;transl_table=11 NZ_CP085478.1 RefSeq gene 480413 481126 . - . ID=gene-LI478_RS02365;Name=dsbC;gbkey=Gene;gene=dsbC;gene_biotype=protein_coding;locus_tag=LI478_RS02365 NZ_CP085478.1 Protein Homology CDS 480413 481126 . - 0 ID=cds-WP_002916301.1;Parent=gene-LI478_RS02365;Dbxref=Genbank:WP_002916301.1;Name=WP_002916301.1;Ontology_term=GO:0042597;gbkey=CDS;gene=dsbC;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228689.1;locus_tag=LI478_RS02365;product=bifunctional protein-disulfide isomerase/oxidoreductase DsbC;protein_id=WP_002916301.1;transl_table=11 NZ_CP085478.1 RefSeq gene 481149 482045 . - . ID=gene-LI478_RS02370;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=LI478_RS02370 NZ_CP085478.1 Protein Homology CDS 481149 482045 . - 0 ID=cds-WP_064153067.1;Parent=gene-LI478_RS02370;Dbxref=Genbank:WP_064153067.1;Name=WP_064153067.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=xerD;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228690.1;locus_tag=LI478_RS02370;product=site-specific tyrosine recombinase XerD;protein_id=WP_064153067.1;transl_table=11 NZ_CP085478.1 RefSeq gene 482146 482667 . + . ID=gene-LI478_RS02375;Name=fldB;gbkey=Gene;gene=fldB;gene_biotype=protein_coding;locus_tag=LI478_RS02375 NZ_CP085478.1 Protein Homology CDS 482146 482667 . + 0 ID=cds-WP_002916308.1;Parent=gene-LI478_RS02375;Dbxref=Genbank:WP_002916308.1;Name=WP_002916308.1;Ontology_term=GO:0009055,GO:0010181;gbkey=CDS;gene=fldB;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228691.1;locus_tag=LI478_RS02375;product=flavodoxin FldB;protein_id=WP_002916308.1;transl_table=11 NZ_CP085478.1 RefSeq gene 482674 483084 . - . ID=gene-LI478_RS02380;Name=LI478_RS02380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02380 NZ_CP085478.1 Protein Homology CDS 482674 483084 . - 0 ID=cds-WP_002916310.1;Parent=gene-LI478_RS02380;Dbxref=Genbank:WP_002916310.1;Name=WP_002916310.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228692.1;locus_tag=LI478_RS02380;product=protein YgfX;protein_id=WP_002916310.1;transl_table=11 NZ_CP085478.1 RefSeq gene 483065 483331 . - . ID=gene-LI478_RS02385;Name=sdhE;gbkey=Gene;gene=sdhE;gene_biotype=protein_coding;locus_tag=LI478_RS02385 NZ_CP085478.1 Protein Homology CDS 483065 483331 . - 0 ID=cds-WP_002916312.1;Parent=gene-LI478_RS02385;Dbxref=Genbank:WP_002916312.1;Name=WP_002916312.1;gbkey=CDS;gene=sdhE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000354044.1;locus_tag=LI478_RS02385;product=FAD assembly factor SdhE;protein_id=WP_002916312.1;transl_table=11 NZ_CP085478.1 RefSeq gene 483577 484560 . + . ID=gene-LI478_RS02390;Name=ygfZ;gbkey=Gene;gene=ygfZ;gene_biotype=protein_coding;locus_tag=LI478_RS02390 NZ_CP085478.1 Protein Homology CDS 483577 484560 . + 0 ID=cds-WP_002916313.1;Parent=gene-LI478_RS02390;Dbxref=Genbank:WP_002916313.1;Name=WP_002916313.1;Ontology_term=GO:0009451,GO:0005542;gbkey=CDS;gene=ygfZ;go_function=folic acid binding|0005542||IEA;go_process=RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228694.1;locus_tag=LI478_RS02390;product=tRNA-modifying protein YgfZ;protein_id=WP_002916313.1;transl_table=11 NZ_CP085478.1 RefSeq gene 484711 485370 . - . ID=gene-LI478_RS02395;Name=LI478_RS02395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02395 NZ_CP085478.1 Protein Homology CDS 484711 485370 . - 0 ID=cds-WP_002916317.1;Parent=gene-LI478_RS02395;Dbxref=Genbank:WP_002916317.1;Name=WP_002916317.1;Ontology_term=GO:0019835;gbkey=CDS;go_process=cytolysis|0019835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228695.1;locus_tag=LI478_RS02395;product=hemolysin III family protein;protein_id=WP_002916317.1;transl_table=11 NZ_CP085478.1 RefSeq gene 485534 485845 . - . ID=gene-LI478_RS02400;Name=yqfB;gbkey=Gene;gene=yqfB;gene_biotype=protein_coding;locus_tag=LI478_RS02400 NZ_CP085478.1 Protein Homology CDS 485534 485845 . - 0 ID=cds-WP_002916319.1;Parent=gene-LI478_RS02400;Dbxref=Genbank:WP_002916319.1;Name=WP_002916319.1;gbkey=CDS;gene=yqfB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228696.1;locus_tag=LI478_RS02400;product=N(4)-acetylcytidine aminohydrolase;protein_id=WP_002916319.1;transl_table=11 NZ_CP085478.1 RefSeq gene 485895 486623 . + . ID=gene-LI478_RS02405;Name=LI478_RS02405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02405 NZ_CP085478.1 Protein Homology CDS 485895 486623 . + 0 ID=cds-WP_002916321.1;Parent=gene-LI478_RS02405;Dbxref=Genbank:WP_002916321.1;Name=WP_002916321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228697.1;locus_tag=LI478_RS02405;product=MurR/RpiR family transcriptional regulator;protein_id=WP_002916321.1;transl_table=11 NZ_CP085478.1 RefSeq gene 486742 488175 . + . ID=gene-LI478_RS02410;Name=bglA;gbkey=Gene;gene=bglA;gene_biotype=protein_coding;locus_tag=LI478_RS02410 NZ_CP085478.1 Protein Homology CDS 486742 488175 . + 0 ID=cds-WP_002916322.1;Parent=gene-LI478_RS02410;Dbxref=Genbank:WP_002916322.1;Name=WP_002916322.1;gbkey=CDS;gene=bglA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228698.1;locus_tag=LI478_RS02410;product=6-phospho-beta-glucosidase BglA;protein_id=WP_002916322.1;transl_table=11 NZ_CP085478.1 RefSeq gene 488300 488659 . + . ID=gene-LI478_RS02415;Name=LI478_RS02415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02415 NZ_CP085478.1 Protein Homology CDS 488300 488659 . + 0 ID=cds-WP_004210062.1;Parent=gene-LI478_RS02415;Dbxref=Genbank:WP_004210062.1;Name=WP_004210062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228699.1;locus_tag=LI478_RS02415;product=hypothetical protein;protein_id=WP_004210062.1;transl_table=11 NZ_CP085478.1 RefSeq gene 488709 490718 . + . ID=gene-LI478_RS02420;Name=LI478_RS02420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02420 NZ_CP085478.1 Protein Homology CDS 488709 490718 . + 0 ID=cds-WP_032433605.1;Parent=gene-LI478_RS02420;Dbxref=Genbank:WP_032433605.1;Name=WP_032433605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228700.1;locus_tag=LI478_RS02420;product=protein-disulfide reductase DsbD family protein;protein_id=WP_032433605.1;transl_table=11 NZ_CP085478.1 RefSeq gene 490720 491331 . + . ID=gene-LI478_RS02425;Name=LI478_RS02425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02425 NZ_CP085478.1 Protein Homology CDS 490720 491331 . + 0 ID=cds-WP_032413027.1;Parent=gene-LI478_RS02425;Dbxref=Genbank:WP_032413027.1;Name=WP_032413027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228701.1;locus_tag=LI478_RS02425;product=thioredoxin domain-containing protein;protein_id=WP_032413027.1;transl_table=11 NZ_CP085478.1 RefSeq gene 491321 491824 . + . ID=gene-LI478_RS02430;Name=LI478_RS02430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02430 NZ_CP085478.1 Protein Homology CDS 491321 491824 . + 0 ID=cds-WP_004889808.1;Parent=gene-LI478_RS02430;Dbxref=Genbank:WP_004889808.1;Name=WP_004889808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228702.1;locus_tag=LI478_RS02430;product=protein disulfide oxidoreductase;protein_id=WP_004889808.1;transl_table=11 NZ_CP085478.1 RefSeq gene 491967 493330 . + . ID=gene-LI478_RS02435;Name=LI478_RS02435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02435 NZ_CP085478.1 Protein Homology CDS 491967 492435 . + 0 ID=cds-WP_085955203.1;Parent=gene-LI478_RS02435;Dbxref=Genbank:WP_085955203.1;Name=WP_085955203.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611151.1;locus_tag=LI478_RS02435;product=IS3-like element ISKpn1 family transposase;protein_id=WP_085955203.1;transl_table=11 NZ_CP085478.1 Protein Homology CDS 492435 493330 . + 2 ID=cds-WP_085955203.1;Parent=gene-LI478_RS02435;Dbxref=Genbank:WP_085955203.1;Name=WP_085955203.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611151.1;locus_tag=LI478_RS02435;product=IS3-like element ISKpn1 family transposase;protein_id=WP_085955203.1;transl_table=11 NZ_CP085478.1 RefSeq gene 493394 494137 . - . ID=gene-LI478_RS02440;Name=LI478_RS02440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02440 NZ_CP085478.1 Protein Homology CDS 493394 494137 . - 0 ID=cds-WP_032425239.1;Parent=gene-LI478_RS02440;Dbxref=Genbank:WP_032425239.1;Name=WP_032425239.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228703.1;locus_tag=LI478_RS02440;product=SDR family oxidoreductase;protein_id=WP_032425239.1;transl_table=11 NZ_CP085478.1 RefSeq gene 494200 497073 . - . ID=gene-LI478_RS02445;Name=gcvP;gbkey=Gene;gene=gcvP;gene_biotype=protein_coding;locus_tag=LI478_RS02445 NZ_CP085478.1 Protein Homology CDS 494200 497073 . - 0 ID=cds-WP_002916478.1;Parent=gene-LI478_RS02445;Dbxref=Genbank:WP_002916478.1;Name=WP_002916478.1;Ontology_term=GO:0019464,GO:0004375;gbkey=CDS;gene=gcvP;go_function=glycine dehydrogenase (decarboxylating) activity|0004375||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017457610.1;locus_tag=LI478_RS02445;product=aminomethyl-transferring glycine dehydrogenase;protein_id=WP_002916478.1;transl_table=11 NZ_CP085478.1 RefSeq gene 497280 497669 . - . ID=gene-LI478_RS02450;Name=gcvH;gbkey=Gene;gene=gcvH;gene_biotype=protein_coding;locus_tag=LI478_RS02450 NZ_CP085478.1 Protein Homology CDS 497280 497669 . - 0 ID=cds-WP_002916479.1;Parent=gene-LI478_RS02450;Dbxref=Genbank:WP_002916479.1;Name=WP_002916479.1;Ontology_term=GO:0019464,GO:0003824;gbkey=CDS;gene=gcvH;go_function=catalytic activity|0003824||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123344.1;locus_tag=LI478_RS02450;product=glycine cleavage system protein GcvH;protein_id=WP_002916479.1;transl_table=11 NZ_CP085478.1 RefSeq gene 497694 498788 . - . ID=gene-LI478_RS02455;Name=gcvT;gbkey=Gene;gene=gcvT;gene_biotype=protein_coding;locus_tag=LI478_RS02455 NZ_CP085478.1 Protein Homology CDS 497694 498788 . - 0 ID=cds-WP_002916480.1;Parent=gene-LI478_RS02455;Dbxref=Genbank:WP_002916480.1;Name=WP_002916480.1;Ontology_term=GO:0019464,GO:0004047,GO:0005737;gbkey=CDS;gene=gcvT;go_component=cytoplasm|0005737||IEA;go_function=aminomethyltransferase activity|0004047||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228706.1;locus_tag=LI478_RS02455;product=glycine cleavage system aminomethyltransferase GcvT;protein_id=WP_002916480.1;transl_table=11 NZ_CP085478.1 RefSeq gene 499211 500413 . - . ID=gene-LI478_RS02460;Name=ubiI;gbkey=Gene;gene=ubiI;gene_biotype=protein_coding;gene_synonym=visC;locus_tag=LI478_RS02460 NZ_CP085478.1 Protein Homology CDS 499211 500413 . - 0 ID=cds-WP_004149783.1;Parent=gene-LI478_RS02460;Dbxref=Genbank:WP_004149783.1;Name=WP_004149783.1;Ontology_term=GO:0006744,GO:0016709,GO:0071949;gbkey=CDS;gene=ubiI;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,FAD binding|0071949||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228707.1;locus_tag=LI478_RS02460;product=FAD-dependent 2-octaprenylphenol hydroxylase;protein_id=WP_004149783.1;transl_table=11 NZ_CP085478.1 RefSeq gene 500424 501602 . - . ID=gene-LI478_RS02465;Name=ubiH;gbkey=Gene;gene=ubiH;gene_biotype=protein_coding;gene_synonym=visB;locus_tag=LI478_RS02465 NZ_CP085478.1 Protein Homology CDS 500424 501602 . - 0 ID=cds-WP_227394168.1;Parent=gene-LI478_RS02465;Dbxref=Genbank:WP_227394168.1;Name=WP_227394168.1;Ontology_term=GO:0006744,GO:0008681,GO:0016709,GO:0071949;gbkey=CDS;gene=ubiH;go_function=2-octaprenyl-6-methoxyphenol hydroxylase activity|0008681||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,FAD binding|0071949||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228708.1;locus_tag=LI478_RS02465;product=2-octaprenyl-6-methoxyphenyl hydroxylase;protein_id=WP_227394168.1;transl_table=11 NZ_CP085478.1 RefSeq gene 501599 502915 . - . ID=gene-LI478_RS02470;Name=pepP;gbkey=Gene;gene=pepP;gene_biotype=protein_coding;locus_tag=LI478_RS02470 NZ_CP085478.1 Protein Homology CDS 501599 502915 . - 0 ID=cds-WP_002916483.1;Parent=gene-LI478_RS02470;Dbxref=Genbank:WP_002916483.1;Name=WP_002916483.1;Ontology_term=GO:0070006;gbkey=CDS;gene=pepP;go_function=metalloaminopeptidase activity|0070006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228709.1;locus_tag=LI478_RS02470;product=Xaa-Pro aminopeptidase;protein_id=WP_002916483.1;transl_table=11 NZ_CP085478.1 RefSeq gene 502939 503517 . - . ID=gene-LI478_RS02475;Name=LI478_RS02475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02475 NZ_CP085478.1 Protein Homology CDS 502939 503517 . - 0 ID=cds-WP_002916486.1;Parent=gene-LI478_RS02475;Dbxref=Genbank:WP_002916486.1;Name=WP_002916486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708672.2;locus_tag=LI478_RS02475;product=YecA family protein;protein_id=WP_002916486.1;transl_table=11 NZ_CP085478.1 RefSeq gene 503684 504013 . + . ID=gene-LI478_RS02480;Name=zapA;gbkey=Gene;gene=zapA;gene_biotype=protein_coding;locus_tag=LI478_RS02480 NZ_CP085478.1 Protein Homology CDS 503684 504013 . + 0 ID=cds-WP_002916488.1;Parent=gene-LI478_RS02480;Dbxref=Genbank:WP_002916488.1;Name=WP_002916488.1;gbkey=CDS;gene=zapA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461976.1;locus_tag=LI478_RS02480;product=cell division protein ZapA;protein_id=WP_002916488.1;transl_table=11 NZ_CP085478.1 RefSeq gene 504055 504238 . + . ID=gene-LI478_RS02485;Name=ssrS;gbkey=Gene;gene=ssrS;gene_biotype=ncRNA;locus_tag=LI478_RS02485 NZ_CP085478.1 cmsearch ncRNA 504055 504238 . + . ID=rna-LI478_RS02485;Parent=gene-LI478_RS02485;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LI478_RS02485;product=6S RNA NZ_CP085478.1 cmsearch exon 504055 504238 . + . ID=exon-LI478_RS02485-1;Parent=rna-LI478_RS02485;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LI478_RS02485;product=6S RNA NZ_CP085478.1 RefSeq gene 504337 504933 . + . ID=gene-LI478_RS02490;Name=LI478_RS02490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02490 NZ_CP085478.1 Protein Homology CDS 504337 504933 . + 0 ID=cds-WP_002916490.1;Parent=gene-LI478_RS02490;Dbxref=Genbank:WP_002916490.1;Name=WP_002916490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228711.1;locus_tag=LI478_RS02490;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=WP_002916490.1;transl_table=11 NZ_CP085478.1 RefSeq gene 505017 506249 . - . ID=gene-LI478_RS02495;Name=serA;gbkey=Gene;gene=serA;gene_biotype=protein_coding;locus_tag=LI478_RS02495 NZ_CP085478.1 Protein Homology CDS 505017 506249 . - 0 ID=cds-WP_002916493.1;Parent=gene-LI478_RS02495;Dbxref=Genbank:WP_002916493.1;Name=WP_002916493.1;Ontology_term=GO:0016616,GO:0051287;gbkey=CDS;gene=serA;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228712.1;locus_tag=LI478_RS02495;product=phosphoglycerate dehydrogenase;protein_id=WP_002916493.1;transl_table=11 NZ_CP085478.1 RefSeq gene 506519 507178 . - . ID=gene-LI478_RS02500;Name=rpiA;gbkey=Gene;gene=rpiA;gene_biotype=protein_coding;locus_tag=LI478_RS02500 NZ_CP085478.1 Protein Homology CDS 506519 507178 . - 0 ID=cds-WP_002916495.1;Parent=gene-LI478_RS02500;Dbxref=Genbank:WP_002916495.1;Name=WP_002916495.1;Ontology_term=GO:0009052,GO:0004751;gbkey=CDS;gene=rpiA;go_function=ribose-5-phosphate isomerase activity|0004751||IEA;go_process=pentose-phosphate shunt%2C non-oxidative branch|0009052||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228714.1;locus_tag=LI478_RS02500;product=ribose-5-phosphate isomerase RpiA;protein_id=WP_002916495.1;transl_table=11 NZ_CP085478.1 RefSeq gene 507346 508239 . + . ID=gene-LI478_RS02505;Name=argP;gbkey=Gene;gene=argP;gene_biotype=protein_coding;locus_tag=LI478_RS02505 NZ_CP085478.1 Protein Homology CDS 507346 508239 . + 0 ID=cds-WP_002916497.1;Parent=gene-LI478_RS02505;Dbxref=Genbank:WP_002916497.1;Name=WP_002916497.1;gbkey=CDS;gene=argP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228715.1;locus_tag=LI478_RS02505;product=DNA-binding transcriptional regulator ArgP;protein_id=WP_002916497.1;transl_table=11 NZ_CP085478.1 RefSeq gene 508293 509060 . - . ID=gene-LI478_RS02510;Name=LI478_RS02510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02510 NZ_CP085478.1 Protein Homology CDS 508293 509060 . - 0 ID=cds-WP_002916499.1;Parent=gene-LI478_RS02510;Dbxref=Genbank:WP_002916499.1;Name=WP_002916499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228716.1;locus_tag=LI478_RS02510;product=oxidative stress defense protein;protein_id=WP_002916499.1;transl_table=11 NZ_CP085478.1 RefSeq gene 509150 509785 . - . ID=gene-LI478_RS02515;Name=argO;gbkey=Gene;gene=argO;gene_biotype=protein_coding;locus_tag=LI478_RS02515 NZ_CP085478.1 Protein Homology CDS 509150 509785 . - 0 ID=cds-WP_004144747.1;Parent=gene-LI478_RS02515;Dbxref=Genbank:WP_004144747.1;Name=WP_004144747.1;Ontology_term=GO:1903826,GO:0061459,GO:0016020;gbkey=CDS;gene=argO;go_component=membrane|0016020||IEA;go_function=L-arginine transmembrane transporter activity|0061459||IEA;go_process=L-arginine transmembrane transport|1903826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417398.1;locus_tag=LI478_RS02515;product=arginine exporter ArgO;protein_id=WP_004144747.1;transl_table=11 NZ_CP085478.1 RefSeq gene 509937 510794 . - . ID=gene-LI478_RS02520;Name=LI478_RS02520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02520 NZ_CP085478.1 Protein Homology CDS 509937 510794 . - 0 ID=cds-WP_002916504.1;Parent=gene-LI478_RS02520;Dbxref=Genbank:WP_002916504.1;Name=WP_002916504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228719.1;locus_tag=LI478_RS02520;product=small-conductance mechanosensitive channel MscS;protein_id=WP_002916504.1;transl_table=11 NZ_CP085478.1 RefSeq gene 510984 512063 . - . ID=gene-LI478_RS02525;Name=fbaA;gbkey=Gene;gene=fbaA;gene_biotype=protein_coding;locus_tag=LI478_RS02525 NZ_CP085478.1 Protein Homology CDS 510984 512063 . - 0 ID=cds-WP_004144748.1;Parent=gene-LI478_RS02525;Dbxref=Genbank:WP_004144748.1;Name=WP_004144748.1;Ontology_term=GO:0005975,GO:0006096,GO:0004332,GO:0008270;gbkey=CDS;gene=fbaA;go_function=fructose-bisphosphate aldolase activity|0004332||IEA,zinc ion binding|0008270||IEA;go_process=carbohydrate metabolic process|0005975||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016505616.1;locus_tag=LI478_RS02525;product=class II fructose-bisphosphate aldolase;protein_id=WP_004144748.1;transl_table=11 NZ_CP085478.1 RefSeq gene 512161 513324 . - . ID=gene-LI478_RS02530;Name=pgk;gbkey=Gene;gene=pgk;gene_biotype=protein_coding;locus_tag=LI478_RS02530 NZ_CP085478.1 Protein Homology CDS 512161 513324 . - 0 ID=cds-WP_002916508.1;Parent=gene-LI478_RS02530;Dbxref=Genbank:WP_002916508.1;Name=WP_002916508.1;gbkey=CDS;gene=pgk;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005761248.1;locus_tag=LI478_RS02530;product=phosphoglycerate kinase;protein_id=WP_002916508.1;transl_table=11 NZ_CP085478.1 RefSeq gene 513364 514392 . - . ID=gene-LI478_RS02535;Name=epd;gbkey=Gene;gene=epd;gene_biotype=protein_coding;locus_tag=LI478_RS02535 NZ_CP085478.1 Protein Homology CDS 513364 514392 . - 0 ID=cds-WP_032438981.1;Parent=gene-LI478_RS02535;Dbxref=Genbank:WP_032438981.1;Name=WP_032438981.1;Ontology_term=GO:0042823,GO:0048001,GO:0051287;gbkey=CDS;gene=epd;go_function=erythrose-4-phosphate dehydrogenase activity|0048001||IEA,NAD binding|0051287||IEA;go_process=pyridoxal phosphate biosynthetic process|0042823||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228722.1;locus_tag=LI478_RS02535;product=erythrose-4-phosphate dehydrogenase;protein_id=WP_032438981.1;transl_table=11 NZ_CP085478.1 RefSeq gene 514776 516767 . - . ID=gene-LI478_RS02540;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=LI478_RS02540 NZ_CP085478.1 Protein Homology CDS 514776 516767 . - 0 ID=cds-WP_004174438.1;Parent=gene-LI478_RS02540;Dbxref=Genbank:WP_004174438.1;Name=WP_004174438.1;Ontology_term=GO:0006098,GO:0004802,GO:0005737;gbkey=CDS;gene=tkt;go_component=cytoplasm|0005737||IEA;go_function=transketolase activity|0004802||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228723.1;locus_tag=LI478_RS02540;product=transketolase;protein_id=WP_004174438.1;transl_table=11 NZ_CP085478.1 RefSeq gene 517046 517804 . + . ID=gene-LI478_RS02545;Name=LI478_RS02545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02545 NZ_CP085478.1 Protein Homology CDS 517046 517804 . + 0 ID=cds-WP_004151780.1;Parent=gene-LI478_RS02545;Dbxref=Genbank:WP_004151780.1;Name=WP_004151780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461993.1;locus_tag=LI478_RS02545;product=M48 family metallopeptidase;protein_id=WP_004151780.1;transl_table=11 NZ_CP085478.1 RefSeq pseudogene 517838 517921 . + . ID=gene-LI478_RS02550;Name=LI478_RS02550;end_range=517921,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS02550;partial=true;pseudo=true NZ_CP085478.1 Protein Homology CDS 517838 517921 . + 0 ID=cds-LI478_RS02550;Parent=gene-LI478_RS02550;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=517921,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228725.1;locus_tag=LI478_RS02550;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP085478.1 RefSeq pseudogene 517966 518205 . + . ID=gene-LI478_RS02555;Name=LI478_RS02555;end_range=518205,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS02555;partial=true;pseudo=true NZ_CP085478.1 Protein Homology CDS 517966 518205 . + 0 ID=cds-LI478_RS02555;Parent=gene-LI478_RS02555;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0016020;end_range=518205,.;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002916515.1;locus_tag=LI478_RS02555;partial=true;product=OprD family outer membrane porin;pseudo=true;transl_table=11 NZ_CP085478.1 RefSeq gene 518265 519185 . - . ID=gene-LI478_RS02560;Name=speB;gbkey=Gene;gene=speB;gene_biotype=protein_coding;locus_tag=LI478_RS02560 NZ_CP085478.1 Protein Homology CDS 518265 519185 . - 0 ID=cds-WP_002916572.1;Parent=gene-LI478_RS02560;Dbxref=Genbank:WP_002916572.1;Name=WP_002916572.1;Ontology_term=GO:0008295,GO:0008783;gbkey=CDS;gene=speB;go_function=agmatinase activity|0008783||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008499737.1;locus_tag=LI478_RS02560;product=agmatinase;protein_id=WP_002916572.1;transl_table=11 NZ_CP085478.1 RefSeq gene 519419 521395 . - . ID=gene-LI478_RS02565;Name=speA;gbkey=Gene;gene=speA;gene_biotype=protein_coding;locus_tag=LI478_RS02565 NZ_CP085478.1 Protein Homology CDS 519419 521395 . - 0 ID=cds-WP_032415538.1;Parent=gene-LI478_RS02565;Dbxref=Genbank:WP_032415538.1;Name=WP_032415538.1;Ontology_term=GO:0006527,GO:0008792;gbkey=CDS;gene=speA;go_function=arginine decarboxylase activity|0008792||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311841.1;locus_tag=LI478_RS02565;product=biosynthetic arginine decarboxylase;protein_id=WP_032415538.1;transl_table=11 NZ_CP085478.1 RefSeq gene 521404 521535 . - . ID=gene-LI478_RS02570;Name=yqgB;gbkey=Gene;gene=yqgB;gene_biotype=protein_coding;locus_tag=LI478_RS02570 NZ_CP085478.1 Protein Homology CDS 521404 521535 . - 0 ID=cds-WP_002916578.1;Parent=gene-LI478_RS02570;Dbxref=Genbank:WP_002916578.1;Name=WP_002916578.1;gbkey=CDS;gene=yqgB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002916578.1;locus_tag=LI478_RS02570;product=acid stress response protein YqgB;protein_id=WP_002916578.1;transl_table=11 NZ_CP085478.1 RefSeq gene 522237 523391 . + . ID=gene-LI478_RS02580;Name=metK;gbkey=Gene;gene=metK;gene_biotype=protein_coding;locus_tag=LI478_RS02580 NZ_CP085478.1 Protein Homology CDS 522237 523391 . + 0 ID=cds-WP_004149807.1;Parent=gene-LI478_RS02580;Dbxref=Genbank:WP_004149807.1;Name=WP_004149807.1;Ontology_term=GO:0006556,GO:0004478;gbkey=CDS;gene=metK;go_function=methionine adenosyltransferase activity|0004478||IEA;go_process=S-adenosylmethionine biosynthetic process|0006556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123306.1;locus_tag=LI478_RS02580;product=methionine adenosyltransferase;protein_id=WP_004149807.1;transl_table=11 NZ_CP085478.1 RefSeq gene 523774 525168 . + . ID=gene-LI478_RS02585;Name=LI478_RS02585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02585 NZ_CP085478.1 Protein Homology CDS 523774 525168 . + 0 ID=cds-WP_002916587.1;Parent=gene-LI478_RS02585;Dbxref=Genbank:WP_002916587.1;Name=WP_002916587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228745.1;locus_tag=LI478_RS02585;product=sugar porter family MFS transporter;protein_id=WP_002916587.1;transl_table=11 NZ_CP085478.1 RefSeq gene 525246 525746 . + . ID=gene-LI478_RS02590;Name=LI478_RS02590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02590 NZ_CP085478.1 Protein Homology CDS 525246 525746 . + 0 ID=cds-WP_002916588.1;Parent=gene-LI478_RS02590;Dbxref=Genbank:WP_002916588.1;Name=WP_002916588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228746.1;locus_tag=LI478_RS02590;product=SprT family zinc-dependent metalloprotease;protein_id=WP_002916588.1;transl_table=11 NZ_CP085478.1 RefSeq gene 525841 526548 . + . ID=gene-LI478_RS02595;Name=endA;gbkey=Gene;gene=endA;gene_biotype=protein_coding;locus_tag=LI478_RS02595 NZ_CP085478.1 Protein Homology CDS 525841 526548 . + 0 ID=cds-WP_002916589.1;Parent=gene-LI478_RS02595;Dbxref=Genbank:WP_002916589.1;Name=WP_002916589.1;Ontology_term=GO:0004518;gbkey=CDS;gene=endA;go_function=nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228747.1;locus_tag=LI478_RS02595;product=deoxyribonuclease I;protein_id=WP_002916589.1;transl_table=11 NZ_CP085478.1 RefSeq gene 526640 527371 . + . ID=gene-LI478_RS02600;Name=rsmE;gbkey=Gene;gene=rsmE;gene_biotype=protein_coding;locus_tag=LI478_RS02600 NZ_CP085478.1 Protein Homology CDS 526640 527371 . + 0 ID=cds-WP_023287988.1;Parent=gene-LI478_RS02600;Dbxref=Genbank:WP_023287988.1;Name=WP_023287988.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rsmE;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228748.1;locus_tag=LI478_RS02600;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=WP_023287988.1;transl_table=11 NZ_CP085478.1 RefSeq gene 527392 528342 . + . ID=gene-LI478_RS02605;Name=gshB;gbkey=Gene;gene=gshB;gene_biotype=protein_coding;locus_tag=LI478_RS02605 NZ_CP085478.1 Protein Homology CDS 527392 528342 . + 0 ID=cds-WP_002916600.1;Parent=gene-LI478_RS02605;Dbxref=Genbank:WP_002916600.1;Name=WP_002916600.1;Ontology_term=GO:0006750,GO:0004363,GO:0005524,GO:0046872;gbkey=CDS;gene=gshB;go_function=glutathione synthase activity|0004363||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228749.1;locus_tag=LI478_RS02605;product=glutathione synthase;protein_id=WP_002916600.1;transl_table=11 NZ_CP085478.1 RefSeq gene 528517 529080 . + . ID=gene-LI478_RS02610;Name=LI478_RS02610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02610 NZ_CP085478.1 Protein Homology CDS 528517 529080 . + 0 ID=cds-WP_002916603.1;Parent=gene-LI478_RS02610;Dbxref=Genbank:WP_002916603.1;Name=WP_002916603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228750.1;locus_tag=LI478_RS02610;product=YqgE/AlgH family protein;protein_id=WP_002916603.1;transl_table=11 NZ_CP085478.1 RefSeq gene 529080 529496 . + . ID=gene-LI478_RS02615;Name=ruvX;gbkey=Gene;gene=ruvX;gene_biotype=protein_coding;locus_tag=LI478_RS02615 NZ_CP085478.1 Protein Homology CDS 529080 529496 . + 0 ID=cds-WP_002916605.1;Parent=gene-LI478_RS02615;Dbxref=Genbank:WP_002916605.1;Name=WP_002916605.1;Ontology_term=GO:0008150,GO:0003674,GO:0005737;gbkey=CDS;gene=ruvX;go_component=cytoplasm|0005737||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228751.1;locus_tag=LI478_RS02615;product=Holliday junction resolvase RuvX;protein_id=WP_002916605.1;transl_table=11 NZ_CP085478.1 RefSeq gene 529549 530202 . - . ID=gene-LI478_RS02620;Name=LI478_RS02620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02620 NZ_CP085478.1 Protein Homology CDS 529549 530202 . - 0 ID=cds-WP_009308631.1;Parent=gene-LI478_RS02620;Dbxref=Genbank:WP_009308631.1;Name=WP_009308631.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228752.1;locus_tag=LI478_RS02620;product=LuxR C-terminal-related transcriptional regulator;protein_id=WP_009308631.1;transl_table=11 NZ_CP085478.1 RefSeq gene 530550 531530 . - . ID=gene-LI478_RS02625;Name=LI478_RS02625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02625 NZ_CP085478.1 Protein Homology CDS 530550 531530 . - 0 ID=cds-WP_004149811.1;Parent=gene-LI478_RS02625;Dbxref=Genbank:WP_004149811.1;Name=WP_004149811.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228754.1;locus_tag=LI478_RS02625;product=type IV pilus twitching motility protein PilT;protein_id=WP_004149811.1;transl_table=11 NZ_CP085478.1 RefSeq gene 531547 532248 . + . ID=gene-LI478_RS02630;Name=LI478_RS02630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02630 NZ_CP085478.1 Protein Homology CDS 531547 532248 . + 0 ID=cds-WP_023287989.1;Parent=gene-LI478_RS02630;Dbxref=Genbank:WP_023287989.1;Name=WP_023287989.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228755.1;locus_tag=LI478_RS02630;product=YggS family pyridoxal phosphate-dependent enzyme;protein_id=WP_023287989.1;transl_table=11 NZ_CP085478.1 RefSeq gene 532269 532835 . + . ID=gene-LI478_RS02635;Name=LI478_RS02635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02635 NZ_CP085478.1 Protein Homology CDS 532269 532835 . + 0 ID=cds-WP_002916613.1;Parent=gene-LI478_RS02635;Dbxref=Genbank:WP_002916613.1;Name=WP_002916613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462017.1;locus_tag=LI478_RS02635;product=YggT family protein;protein_id=WP_002916613.1;transl_table=11 NZ_CP085478.1 RefSeq gene 532832 533122 . + . ID=gene-LI478_RS02640;Name=yggU;gbkey=Gene;gene=yggU;gene_biotype=protein_coding;locus_tag=LI478_RS02640 NZ_CP085478.1 Protein Homology CDS 532832 533122 . + 0 ID=cds-WP_002916614.1;Parent=gene-LI478_RS02640;Dbxref=Genbank:WP_002916614.1;Name=WP_002916614.1;gbkey=CDS;gene=yggU;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228757.1;locus_tag=LI478_RS02640;product=DUF167 family protein YggU;protein_id=WP_002916614.1;transl_table=11 NZ_CP085478.1 RefSeq gene 533135 533728 . + . ID=gene-LI478_RS02645;Name=LI478_RS02645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02645 NZ_CP085478.1 Protein Homology CDS 533135 533728 . + 0 ID=cds-WP_002916615.1;Parent=gene-LI478_RS02645;Dbxref=Genbank:WP_002916615.1;Name=WP_002916615.1;Ontology_term=GO:0009143,GO:0047429;gbkey=CDS;go_function=nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleoside triphosphate catabolic process|0009143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228758.1;locus_tag=LI478_RS02645;product=XTP/dITP diphosphatase;protein_id=WP_002916615.1;transl_table=11 NZ_CP085478.1 RefSeq gene 533721 534857 . + . ID=gene-LI478_RS02650;Name=hemW;gbkey=Gene;gene=hemW;gene_biotype=protein_coding;locus_tag=LI478_RS02650 NZ_CP085478.1 Protein Homology CDS 533721 534857 . + 0 ID=cds-WP_002916617.1;Parent=gene-LI478_RS02650;Dbxref=Genbank:WP_002916617.1;Name=WP_002916617.1;Ontology_term=GO:0006779,GO:0051989;gbkey=CDS;gene=hemW;go_function=coproporphyrinogen dehydrogenase activity|0051989||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228759.1;locus_tag=LI478_RS02650;product=radical SAM family heme chaperone HemW;protein_id=WP_002916617.1;transl_table=11 NZ_CP085478.1 RefSeq gene 535163 536149 . + . ID=gene-LI478_RS02655;Name=LI478_RS02655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02655 NZ_CP085478.1 Protein Homology CDS 535163 536149 . + 0 ID=cds-WP_023285550.1;Parent=gene-LI478_RS02655;Dbxref=Genbank:WP_023285550.1;Name=WP_023285550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016231167.1;locus_tag=LI478_RS02655;product=TRAP transporter substrate-binding protein;protein_id=WP_023285550.1;transl_table=11 NZ_CP085478.1 RefSeq gene 536196 536699 . + . ID=gene-LI478_RS02660;Name=LI478_RS02660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02660 NZ_CP085478.1 Protein Homology CDS 536196 536699 . + 0 ID=cds-WP_025861936.1;Parent=gene-LI478_RS02660;Dbxref=Genbank:WP_025861936.1;Name=WP_025861936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004135834.1;locus_tag=LI478_RS02660;product=TRAP transporter small permease;protein_id=WP_025861936.1;transl_table=11 NZ_CP085478.1 RefSeq gene 536699 538000 . + . ID=gene-LI478_RS02665;Name=LI478_RS02665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02665 NZ_CP085478.1 Protein Homology CDS 536699 538000 . + 0 ID=cds-WP_004149816.1;Parent=gene-LI478_RS02665;Dbxref=Genbank:WP_004149816.1;Name=WP_004149816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708726.2;locus_tag=LI478_RS02665;product=TRAP transporter large permease subunit;protein_id=WP_004149816.1;transl_table=11 NZ_CP085478.1 RefSeq gene 538048 538767 . - . ID=gene-LI478_RS02670;Name=LI478_RS02670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02670 NZ_CP085478.1 Protein Homology CDS 538048 538767 . - 0 ID=cds-WP_019704316.1;Parent=gene-LI478_RS02670;Dbxref=Genbank:WP_019704316.1;Name=WP_019704316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228760.1;locus_tag=LI478_RS02670;product=DUF2884 domain-containing protein;protein_id=WP_019704316.1;transl_table=11 NZ_CP085478.1 RefSeq gene 538818 539144 . - . ID=gene-LI478_RS02675;Name=LI478_RS02675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02675 NZ_CP085478.1 Protein Homology CDS 538818 539144 . - 0 ID=cds-WP_002916620.1;Parent=gene-LI478_RS02675;Dbxref=Genbank:WP_002916620.1;Name=WP_002916620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228761.1;locus_tag=LI478_RS02675;product=YggL family protein;protein_id=WP_002916620.1;transl_table=11 NZ_CP085478.1 RefSeq gene 539144 539863 . - . ID=gene-LI478_RS02680;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;locus_tag=LI478_RS02680 NZ_CP085478.1 Protein Homology CDS 539144 539863 . - 0 ID=cds-WP_002916627.1;Parent=gene-LI478_RS02680;Dbxref=Genbank:WP_002916627.1;Name=WP_002916627.1;Ontology_term=GO:0006400,GO:0008176;gbkey=CDS;gene=trmB;go_function=tRNA (guanine-N7-)-methyltransferase activity|0008176||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228762.1;locus_tag=LI478_RS02680;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;protein_id=WP_002916627.1;transl_table=11 NZ_CP085478.1 RefSeq gene 540000 541058 . + . ID=gene-LI478_RS02685;Name=mutY;gbkey=Gene;gene=mutY;gene_biotype=protein_coding;locus_tag=LI478_RS02685 NZ_CP085478.1 Protein Homology CDS 540000 541058 . + 0 ID=cds-WP_002916628.1;Parent=gene-LI478_RS02685;Dbxref=Genbank:WP_002916628.1;Name=WP_002916628.1;Ontology_term=GO:0006281,GO:0019104;gbkey=CDS;gene=mutY;go_function=DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228763.1;locus_tag=LI478_RS02685;product=A/G-specific adenine glycosylase;protein_id=WP_002916628.1;transl_table=11 NZ_CP085478.1 RefSeq gene 541087 541362 . + . ID=gene-LI478_RS02690;Name=LI478_RS02690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02690 NZ_CP085478.1 Protein Homology CDS 541087 541362 . + 0 ID=cds-WP_004105744.1;Parent=gene-LI478_RS02690;Dbxref=Genbank:WP_004105744.1;Name=WP_004105744.1;Ontology_term=GO:0005506;gbkey=CDS;go_function=iron ion binding|0005506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228764.1;locus_tag=LI478_RS02690;product=oxidative damage protection protein;protein_id=WP_004105744.1;transl_table=11 NZ_CP085478.1 RefSeq gene 541412 542494 . + . ID=gene-LI478_RS02695;Name=mltC;gbkey=Gene;gene=mltC;gene_biotype=protein_coding;locus_tag=LI478_RS02695 NZ_CP085478.1 Protein Homology CDS 541412 542494 . + 0 ID=cds-WP_002916629.1;Parent=gene-LI478_RS02695;Dbxref=Genbank:WP_002916629.1;Name=WP_002916629.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltC;go_component=membrane|0016020||IEA;go_function=lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123264.1;locus_tag=LI478_RS02695;product=membrane-bound lytic murein transglycosylase MltC;protein_id=WP_002916629.1;transl_table=11 NZ_CP085478.1 RefSeq gene 542686 543939 . + . ID=gene-LI478_RS02700;Name=LI478_RS02700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02700 NZ_CP085478.1 Protein Homology CDS 542686 543939 . + 0 ID=cds-WP_004144787.1;Parent=gene-LI478_RS02700;Dbxref=Genbank:WP_004144787.1;Name=WP_004144787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228767.1;locus_tag=LI478_RS02700;product=nucleoside permease;protein_id=WP_004144787.1;transl_table=11 NZ_CP085478.1 RefSeq gene 543983 546121 . - . ID=gene-LI478_RS02705;Name=LI478_RS02705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02705 NZ_CP085478.1 Protein Homology CDS 543983 546121 . - 0 ID=cds-WP_009308638.1;Parent=gene-LI478_RS02705;Dbxref=Genbank:WP_009308638.1;Name=WP_009308638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228768.1;locus_tag=LI478_RS02705;product=ornithine decarboxylase;protein_id=WP_009308638.1;transl_table=11 NZ_CP085478.1 RefSeq gene 546541 547254 . + . ID=gene-LI478_RS02710;Name=LI478_RS02710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02710 NZ_CP085478.1 Protein Homology CDS 546541 547254 . + 0 ID=cds-WP_002916694.1;Parent=gene-LI478_RS02710;Dbxref=Genbank:WP_002916694.1;Name=WP_002916694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228769.1;locus_tag=LI478_RS02710;product=DUF554 domain-containing protein;protein_id=WP_002916694.1;transl_table=11 NZ_CP085478.1 RefSeq gene 547360 547435 . + . ID=gene-LI478_RS02715;Name=LI478_RS02715;gbkey=Gene;gene_biotype=tRNA;locus_tag=LI478_RS02715 NZ_CP085478.1 tRNAscan-SE tRNA 547360 547435 . + . ID=rna-LI478_RS02715;Parent=gene-LI478_RS02715;anticodon=(pos:547393..547395);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS02715;product=tRNA-Phe NZ_CP085478.1 tRNAscan-SE exon 547360 547435 . + . ID=exon-LI478_RS02715-1;Parent=rna-LI478_RS02715;anticodon=(pos:547393..547395);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS02715;product=tRNA-Phe NZ_CP085478.1 RefSeq pseudogene 547759 547993 . + . ID=gene-LI478_RS02720;Name=LI478_RS02720;end_range=547993,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS02720;partial=true;pseudo=true NZ_CP085478.1 Protein Homology CDS 547759 547993 . + 0 ID=cds-LI478_RS02720;Parent=gene-LI478_RS02720;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=547993,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001219011.1;locus_tag=LI478_RS02720;partial=true;product=Arm DNA-binding domain-containing protein;pseudo=true;transl_table=11 NZ_CP085478.1 RefSeq gene 548227 549126 . + . ID=gene-LI478_RS02725;Name=LI478_RS02725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02725 NZ_CP085478.1 Protein Homology CDS 548227 549126 . + 0 ID=cds-WP_223175346.1;Parent=gene-LI478_RS02725;Dbxref=Genbank:WP_223175346.1;Name=WP_223175346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014839547.1;locus_tag=LI478_RS02725;product=DUF1837 domain-containing protein;protein_id=WP_223175346.1;transl_table=11 NZ_CP085478.1 RefSeq gene 549132 551720 . + . ID=gene-LI478_RS02730;Name=LI478_RS02730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02730 NZ_CP085478.1 Protein Homology CDS 549132 551720 . + 0 ID=cds-WP_032438984.1;Parent=gene-LI478_RS02730;Dbxref=Genbank:WP_032438984.1;Name=WP_032438984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001004290.1;locus_tag=LI478_RS02730;product=helicase-related protein;protein_id=WP_032438984.1;transl_table=11 NZ_CP085478.1 RefSeq gene 551756 552898 . - . ID=gene-LI478_RS02735;Name=LI478_RS02735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02735 NZ_CP085478.1 Protein Homology CDS 551756 552898 . - 0 ID=cds-WP_032415549.1;Parent=gene-LI478_RS02735;Dbxref=Genbank:WP_032415549.1;Name=WP_032415549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012822466.1;locus_tag=LI478_RS02735;product=Fic family protein;protein_id=WP_032415549.1;transl_table=11 NZ_CP085478.1 RefSeq gene 553651 555027 . + . ID=gene-LI478_RS02740;Name=LI478_RS02740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02740 NZ_CP085478.1 Protein Homology CDS 553651 555027 . + 0 ID=cds-WP_023287999.1;Parent=gene-LI478_RS02740;Dbxref=Genbank:WP_023287999.1;Name=WP_023287999.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228836.1;locus_tag=LI478_RS02740;product=pyridoxal-phosphate dependent enzyme;protein_id=WP_023287999.1;transl_table=11 NZ_CP085478.1 RefSeq gene 555038 556186 . + . ID=gene-LI478_RS02745;Name=LI478_RS02745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02745 NZ_CP085478.1 Protein Homology CDS 555038 556186 . + 0 ID=cds-WP_023288000.1;Parent=gene-LI478_RS02745;Dbxref=Genbank:WP_023288000.1;Name=WP_023288000.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228837.1;locus_tag=LI478_RS02745;product=PLP-dependent aspartate aminotransferase family protein;protein_id=WP_023288000.1;transl_table=11 NZ_CP085478.1 RefSeq gene 556187 557098 . - . ID=gene-LI478_RS02750;Name=LI478_RS02750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02750 NZ_CP085478.1 Protein Homology CDS 556187 557098 . - 0 ID=cds-WP_023288001.1;Parent=gene-LI478_RS02750;Dbxref=Genbank:WP_023288001.1;Name=WP_023288001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228838.1;locus_tag=LI478_RS02750;product=LysR family transcriptional regulator;protein_id=WP_023288001.1;transl_table=11 NZ_CP085478.1 RefSeq gene 557196 557798 . + . ID=gene-LI478_RS02755;Name=LI478_RS02755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02755 NZ_CP085478.1 Protein Homology CDS 557196 557798 . + 0 ID=cds-WP_004174410.1;Parent=gene-LI478_RS02755;Dbxref=Genbank:WP_004174410.1;Name=WP_004174410.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228839.1;locus_tag=LI478_RS02755;product=short chain dehydrogenase;protein_id=WP_004174410.1;transl_table=11 NZ_CP085478.1 RefSeq gene 557885 558229 . + . ID=gene-LI478_RS02760;Name=LI478_RS02760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02760 NZ_CP085478.1 Protein Homology CDS 557885 558229 . + 0 ID=cds-WP_004185642.1;Parent=gene-LI478_RS02760;Dbxref=Genbank:WP_004185642.1;Name=WP_004185642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228840.1;locus_tag=LI478_RS02760;product=hypothetical protein;protein_id=WP_004185642.1;transl_table=11 NZ_CP085478.1 RefSeq gene 558429 558617 . + . ID=gene-LI478_RS02765;Name=LI478_RS02765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02765 NZ_CP085478.1 Protein Homology CDS 558429 558617 . + 0 ID=cds-WP_002916738.1;Parent=gene-LI478_RS02765;Dbxref=Genbank:WP_002916738.1;Name=WP_002916738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228841.1;locus_tag=LI478_RS02765;product=hypothetical protein;protein_id=WP_002916738.1;transl_table=11 NZ_CP085478.1 RefSeq gene 558794 559975 . - . ID=gene-LI478_RS02770;Name=LI478_RS02770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02770 NZ_CP085478.1 Protein Homology CDS 558794 559975 . - 0 ID=cds-WP_227394169.1;Parent=gene-LI478_RS02770;Dbxref=Genbank:WP_227394169.1;Name=WP_227394169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228842.1;locus_tag=LI478_RS02770;product=PLP-dependent aminotransferase family protein;protein_id=WP_227394169.1;transl_table=11 NZ_CP085478.1 RefSeq gene 560121 561986 . - . ID=gene-LI478_RS02775;Name=gss;gbkey=Gene;gene=gss;gene_biotype=protein_coding;locus_tag=LI478_RS02775 NZ_CP085478.1 Protein Homology CDS 560121 561986 . - 0 ID=cds-WP_064153296.1;Parent=gene-LI478_RS02775;Dbxref=Genbank:WP_064153296.1;Name=WP_064153296.1;gbkey=CDS;gene=gss;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004149826.1;locus_tag=LI478_RS02775;product=bifunctional glutathionylspermidine amidase/synthase;protein_id=WP_064153296.1;transl_table=11 NZ_CP085478.1 RefSeq gene 562063 562185 . - . ID=gene-LI478_RS02780;Name=LI478_RS02780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02780 NZ_CP085478.1 Protein Homology CDS 562063 562185 . - 0 ID=cds-WP_004217169.1;Parent=gene-LI478_RS02780;Dbxref=Genbank:WP_004217169.1;Name=WP_004217169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228844.1;locus_tag=LI478_RS02780;product=hypothetical protein;protein_id=WP_004217169.1;transl_table=11 NZ_CP085478.1 RefSeq gene 562206 562766 . + . ID=gene-LI478_RS02785;Name=LI478_RS02785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02785 NZ_CP085478.1 Protein Homology CDS 562206 562766 . + 0 ID=cds-WP_004150918.1;Parent=gene-LI478_RS02785;Dbxref=Genbank:WP_004150918.1;Name=WP_004150918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228845.1;locus_tag=LI478_RS02785;product=thioredoxin domain-containing protein;protein_id=WP_004150918.1;transl_table=11 NZ_CP085478.1 RefSeq gene 562814 563680 . + . ID=gene-LI478_RS02790;Name=yghU;gbkey=Gene;gene=yghU;gene_biotype=protein_coding;locus_tag=LI478_RS02790 NZ_CP085478.1 Protein Homology CDS 562814 563680 . + 0 ID=cds-WP_002916742.1;Parent=gene-LI478_RS02790;Dbxref=Genbank:WP_002916742.1;Name=WP_002916742.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=yghU;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228846.1;locus_tag=LI478_RS02790;product=glutathione-dependent disulfide-bond oxidoreductase;protein_id=WP_002916742.1;transl_table=11 NZ_CP085478.1 RefSeq gene 563753 564040 . - . ID=gene-LI478_RS02795;Name=LI478_RS02795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02795 NZ_CP085478.1 Protein Homology CDS 563753 564040 . - 0 ID=cds-WP_002916743.1;Parent=gene-LI478_RS02795;Dbxref=Genbank:WP_002916743.1;Name=WP_002916743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228847.1;locus_tag=LI478_RS02795;product=DUF2623 domain-containing protein;protein_id=WP_002916743.1;transl_table=11 NZ_CP085478.1 RefSeq gene 564119 565006 . - . ID=gene-LI478_RS02800;Name=LI478_RS02800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02800 NZ_CP085478.1 Protein Homology CDS 564119 565006 . - 0 ID=cds-WP_004144560.1;Parent=gene-LI478_RS02800;Dbxref=Genbank:WP_004144560.1;Name=WP_004144560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228848.1;locus_tag=LI478_RS02800;product=dienelactone hydrolase family protein;protein_id=WP_004144560.1;transl_table=11 NZ_CP085478.1 RefSeq gene 565128 565622 . - . ID=gene-LI478_RS02805;Name=LI478_RS02805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02805 NZ_CP085478.1 Protein Homology CDS 565128 565622 . - 0 ID=cds-WP_004105804.1;Parent=gene-LI478_RS02805;Dbxref=Genbank:WP_004105804.1;Name=WP_004105804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228849.1;locus_tag=LI478_RS02805;product=TIGR00645 family protein;protein_id=WP_004105804.1;transl_table=11 NZ_CP085478.1 RefSeq gene 565729 567252 . - . ID=gene-LI478_RS02810;Name=LI478_RS02810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02810 NZ_CP085478.1 Protein Homology CDS 565729 567252 . - 0 ID=cds-WP_227394170.1;Parent=gene-LI478_RS02810;Dbxref=Genbank:WP_227394170.1;Name=WP_227394170.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228850.1;locus_tag=LI478_RS02810;product=glycoside hydrolase 43 family protein;protein_id=WP_227394170.1;transl_table=11 NZ_CP085478.1 RefSeq gene 567266 568684 . - . ID=gene-LI478_RS02815;Name=LI478_RS02815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02815 NZ_CP085478.1 Protein Homology CDS 567266 568684 . - 0 ID=cds-WP_002916782.1;Parent=gene-LI478_RS02815;Dbxref=Genbank:WP_002916782.1;Name=WP_002916782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228851.1;locus_tag=LI478_RS02815;product=MFS transporter;protein_id=WP_002916782.1;transl_table=11 NZ_CP085478.1 RefSeq gene 568889 569314 . - . ID=gene-LI478_RS02820;Name=exbD;gbkey=Gene;gene=exbD;gene_biotype=protein_coding;locus_tag=LI478_RS02820 NZ_CP085478.1 Protein Homology CDS 568889 569314 . - 0 ID=cds-WP_002916785.1;Parent=gene-LI478_RS02820;Dbxref=Genbank:WP_002916785.1;Name=WP_002916785.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=exbD;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228852.1;locus_tag=LI478_RS02820;product=TonB system transport protein ExbD;protein_id=WP_002916785.1;transl_table=11 NZ_CP085478.1 RefSeq gene 569321 570052 . - . ID=gene-LI478_RS02825;Name=exbB;gbkey=Gene;gene=exbB;gene_biotype=protein_coding;locus_tag=LI478_RS02825 NZ_CP085478.1 Protein Homology CDS 569321 570052 . - 0 ID=cds-WP_004174395.1;Parent=gene-LI478_RS02825;Dbxref=Genbank:WP_004174395.1;Name=WP_004174395.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=exbB;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228853.1;locus_tag=LI478_RS02825;product=tol-pal system-associated acyl-CoA thioesterase;protein_id=WP_004174395.1;transl_table=11 NZ_CP085478.1 RefSeq gene 570303 571490 . + . ID=gene-LI478_RS02830;Name=metC;gbkey=Gene;gene=metC;gene_biotype=protein_coding;locus_tag=LI478_RS02830 NZ_CP085478.1 Protein Homology CDS 570303 571490 . + 0 ID=cds-WP_004149836.1;Parent=gene-LI478_RS02830;Dbxref=Genbank:WP_004149836.1;Name=WP_004149836.1;Ontology_term=GO:0006520,GO:0019346,GO:0004121,GO:0030170;gbkey=CDS;gene=metC;go_function=cystathionine beta-lyase activity|0004121||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=amino acid metabolic process|0006520||IEA,transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228855.1;locus_tag=LI478_RS02830;product=cystathionine beta-lyase;protein_id=WP_004149836.1;transl_table=11 NZ_CP085478.1 RefSeq gene 571622 572281 . + . ID=gene-LI478_RS02835;Name=LI478_RS02835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02835 NZ_CP085478.1 Protein Homology CDS 571622 572281 . + 0 ID=cds-WP_002916791.1;Parent=gene-LI478_RS02835;Dbxref=Genbank:WP_002916791.1;Name=WP_002916791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228856.1;locus_tag=LI478_RS02835;product=DedA family protein;protein_id=WP_002916791.1;transl_table=11 NZ_CP085478.1 RefSeq gene 572332 573231 . - . ID=gene-LI478_RS02840;Name=LI478_RS02840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02840 NZ_CP085478.1 Protein Homology CDS 572332 573231 . - 0 ID=cds-WP_004144552.1;Parent=gene-LI478_RS02840;Dbxref=Genbank:WP_004144552.1;Name=WP_004144552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228857.1;locus_tag=LI478_RS02840;product=AraC family transcriptional regulator;protein_id=WP_004144552.1;transl_table=11 NZ_CP085478.1 RefSeq gene 573428 574591 . + . ID=gene-LI478_RS02845;Name=yqhD;gbkey=Gene;gene=yqhD;gene_biotype=protein_coding;locus_tag=LI478_RS02845 NZ_CP085478.1 Protein Homology CDS 573428 574591 . + 0 ID=cds-WP_004144551.1;Parent=gene-LI478_RS02845;Dbxref=Genbank:WP_004144551.1;Name=WP_004144551.1;Ontology_term=GO:0046872,GO:1990362;gbkey=CDS;gene=yqhD;go_function=metal ion binding|0046872||IEA,butanol dehydrogenase activity|1990362||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228858.1;locus_tag=LI478_RS02845;product=alcohol dehydrogenase;protein_id=WP_004144551.1;transl_table=11 NZ_CP085478.1 RefSeq gene 574737 575564 . + . ID=gene-LI478_RS02850;Name=dkgA;gbkey=Gene;gene=dkgA;gene_biotype=protein_coding;locus_tag=LI478_RS02850 NZ_CP085478.1 Protein Homology CDS 574737 575564 . + 0 ID=cds-WP_002916796.1;Parent=gene-LI478_RS02850;Dbxref=Genbank:WP_002916796.1;Name=WP_002916796.1;Ontology_term=GO:0050580;gbkey=CDS;gene=dkgA;go_function=2%2C5-didehydrogluconate reductase activity|0050580||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228859.1;locus_tag=LI478_RS02850;product=2%2C5-didehydrogluconate reductase DkgA;protein_id=WP_002916796.1;transl_table=11 NZ_CP085478.1 RefSeq gene 575600 576127 . - . ID=gene-LI478_RS02855;Name=LI478_RS02855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02855 NZ_CP085478.1 Protein Homology CDS 575600 576127 . - 0 ID=cds-WP_004144550.1;Parent=gene-LI478_RS02855;Dbxref=Genbank:WP_004144550.1;Name=WP_004144550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228860.1;locus_tag=LI478_RS02855;product=GNAT family N-acetyltransferase;protein_id=WP_004144550.1;transl_table=11 NZ_CP085478.1 RefSeq pseudogene 576127 578458 . - . ID=gene-LI478_RS02860;Name=LI478_RS02860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS02860;pseudo=true NZ_CP085478.1 Protein Homology CDS 576127 578458 . - 0 ID=cds-LI478_RS02860;Parent=gene-LI478_RS02860;Note=frameshifted;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228861.1;locus_tag=LI478_RS02860;product=YgiQ family radical SAM protein;pseudo=true;transl_table=11 NZ_CP085478.1 RefSeq gene 578492 579904 . - . ID=gene-LI478_RS02865;Name=ftsP;gbkey=Gene;gene=ftsP;gene_biotype=protein_coding;locus_tag=LI478_RS02865 NZ_CP085478.1 Protein Homology CDS 578492 579904 . - 0 ID=cds-WP_004144547.1;Parent=gene-LI478_RS02865;Dbxref=Genbank:WP_004144547.1;Name=WP_004144547.1;Ontology_term=GO:0043093,GO:0016491;gbkey=CDS;gene=ftsP;go_function=oxidoreductase activity|0016491||IEA;go_process=FtsZ-dependent cytokinesis|0043093||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228862.1;locus_tag=LI478_RS02865;product=cell division protein FtsP;protein_id=WP_004144547.1;transl_table=11 NZ_CP085478.1 RefSeq gene 579988 580725 . - . ID=gene-LI478_RS02870;Name=plsC;gbkey=Gene;gene=plsC;gene_biotype=protein_coding;gene_synonym=parF;locus_tag=LI478_RS02870 NZ_CP085478.1 Protein Homology CDS 579988 580725 . - 0 ID=cds-WP_002916826.1;Parent=gene-LI478_RS02870;Dbxref=Genbank:WP_002916826.1;Name=WP_002916826.1;gbkey=CDS;gene=plsC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228863.1;locus_tag=LI478_RS02870;product=1-acylglycerol-3-phosphate O-acyltransferase;protein_id=WP_002916826.1;transl_table=11 NZ_CP085478.1 RefSeq gene 580917 583175 . - . ID=gene-LI478_RS02875;Name=parC;gbkey=Gene;gene=parC;gene_biotype=protein_coding;locus_tag=LI478_RS02875 NZ_CP085478.1 Protein Homology CDS 580917 583175 . - 0 ID=cds-WP_004181324.1;Parent=gene-LI478_RS02875;Dbxref=Genbank:WP_004181324.1;Name=WP_004181324.1;Ontology_term=GO:0006265,GO:0003918,GO:0009340;gbkey=CDS;gene=parC;go_component=DNA topoisomerase IV complex|0009340||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228864.1;locus_tag=LI478_RS02875;product=DNA topoisomerase IV subunit A;protein_id=WP_004181324.1;transl_table=11 NZ_CP085478.1 RefSeq gene 583297 584166 . - . ID=gene-LI478_RS02880;Name=LI478_RS02880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02880 NZ_CP085478.1 Protein Homology CDS 583297 584166 . - 0 ID=cds-WP_002916831.1;Parent=gene-LI478_RS02880;Dbxref=Genbank:WP_002916831.1;Name=WP_002916831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228865.1;locus_tag=LI478_RS02880;product=AraC family transcriptional regulator;protein_id=WP_002916831.1;transl_table=11 NZ_CP085478.1 RefSeq gene 584244 584639 . - . ID=gene-LI478_RS02885;Name=LI478_RS02885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02885 NZ_CP085478.1 Protein Homology CDS 584244 584639 . - 0 ID=cds-WP_002916833.1;Parent=gene-LI478_RS02885;Dbxref=Genbank:WP_002916833.1;Name=WP_002916833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228866.1;locus_tag=LI478_RS02885;product=YgiW/YdeI family stress tolerance OB fold protein;protein_id=WP_002916833.1;transl_table=11 NZ_CP085478.1 RefSeq gene 584790 585449 . + . ID=gene-LI478_RS02890;Name=qseB;gbkey=Gene;gene=qseB;gene_biotype=protein_coding;locus_tag=LI478_RS02890 NZ_CP085478.1 Protein Homology CDS 584790 585449 . + 0 ID=cds-WP_002916836.1;Parent=gene-LI478_RS02890;Dbxref=Genbank:WP_002916836.1;Name=WP_002916836.1;gbkey=CDS;gene=qseB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228867.1;locus_tag=LI478_RS02890;product=two-component system response regulator QseB;protein_id=WP_002916836.1;transl_table=11 NZ_CP085478.1 RefSeq gene 585446 586795 . + . ID=gene-LI478_RS02895;Name=qseC;gbkey=Gene;gene=qseC;gene_biotype=protein_coding;locus_tag=LI478_RS02895 NZ_CP085478.1 Protein Homology CDS 585446 586795 . + 0 ID=cds-WP_064153293.1;Parent=gene-LI478_RS02895;Dbxref=Genbank:WP_064153293.1;Name=WP_064153293.1;Ontology_term=GO:0007165,GO:0000155;gbkey=CDS;gene=qseC;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228868.1;locus_tag=LI478_RS02895;product=two-component system sensor histidine kinase QseC;protein_id=WP_064153293.1;transl_table=11 NZ_CP085478.1 RefSeq gene 586902 587483 . + . ID=gene-LI478_RS02900;Name=LI478_RS02900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02900 NZ_CP085478.1 Protein Homology CDS 586902 587483 . + 0 ID=cds-WP_002916840.1;Parent=gene-LI478_RS02900;Dbxref=Genbank:WP_002916840.1;Name=WP_002916840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228869.1;locus_tag=LI478_RS02900;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_002916840.1;transl_table=11 NZ_CP085478.1 RefSeq gene 587564 587878 . + . ID=gene-LI478_RS02905;Name=LI478_RS02905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02905 NZ_CP085478.1 Protein Homology CDS 587564 587878 . + 0 ID=cds-WP_002916842.1;Parent=gene-LI478_RS02905;Dbxref=Genbank:WP_002916842.1;Name=WP_002916842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228870.1;locus_tag=LI478_RS02905;product=putative quinol monooxygenase;protein_id=WP_002916842.1;transl_table=11 NZ_CP085478.1 RefSeq gene 587951 589846 . - . ID=gene-LI478_RS02910;Name=parE;gbkey=Gene;gene=parE;gene_biotype=protein_coding;locus_tag=LI478_RS02910 NZ_CP085478.1 Protein Homology CDS 587951 589846 . - 0 ID=cds-WP_002916844.1;Parent=gene-LI478_RS02910;Dbxref=Genbank:WP_002916844.1;Name=WP_002916844.1;Ontology_term=GO:0006265,GO:0003918,GO:0009340;gbkey=CDS;gene=parE;go_component=DNA topoisomerase IV complex|0009340||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228871.1;locus_tag=LI478_RS02910;product=DNA topoisomerase IV subunit B;protein_id=WP_002916844.1;transl_table=11 NZ_CP085478.1 RefSeq gene 589877 590452 . - . ID=gene-LI478_RS02915;Name=yqiA;gbkey=Gene;gene=yqiA;gene_biotype=protein_coding;locus_tag=LI478_RS02915 NZ_CP085478.1 Protein Homology CDS 589877 590452 . - 0 ID=cds-WP_002916845.1;Parent=gene-LI478_RS02915;Dbxref=Genbank:WP_002916845.1;Name=WP_002916845.1;gbkey=CDS;gene=yqiA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228872.1;locus_tag=LI478_RS02915;product=esterase YqiA;protein_id=WP_002916845.1;transl_table=11 NZ_CP085478.1 RefSeq gene 590452 591279 . - . ID=gene-LI478_RS02920;Name=cpdA;gbkey=Gene;gene=cpdA;gene_biotype=protein_coding;locus_tag=LI478_RS02920 NZ_CP085478.1 Protein Homology CDS 590452 591279 . - 0 ID=cds-WP_002916846.1;Parent=gene-LI478_RS02920;Dbxref=Genbank:WP_002916846.1;Name=WP_002916846.1;Ontology_term=GO:0004115;gbkey=CDS;gene=cpdA;go_function=3'%2C5'-cyclic-AMP phosphodiesterase activity|0004115||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228873.1;locus_tag=LI478_RS02920;product=3'%2C5'-cyclic-AMP phosphodiesterase;protein_id=WP_002916846.1;transl_table=11 NZ_CP085478.1 RefSeq gene 591304 591726 . - . ID=gene-LI478_RS02925;Name=LI478_RS02925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02925 NZ_CP085478.1 Protein Homology CDS 591304 591726 . - 0 ID=cds-WP_002916847.1;Parent=gene-LI478_RS02925;Dbxref=Genbank:WP_002916847.1;Name=WP_002916847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228874.1;locus_tag=LI478_RS02925;product=DUF1249 family protein;protein_id=WP_002916847.1;transl_table=11 NZ_CP085478.1 RefSeq gene 591723 592355 . - . ID=gene-LI478_RS02930;Name=nudF;gbkey=Gene;gene=nudF;gene_biotype=protein_coding;locus_tag=LI478_RS02930 NZ_CP085478.1 Protein Homology CDS 591723 592355 . - 0 ID=cds-WP_016532683.1;Parent=gene-LI478_RS02930;Dbxref=Genbank:WP_016532683.1;Name=WP_016532683.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;gene=nudF;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228875.1;locus_tag=LI478_RS02930;product=ADP-ribose diphosphatase;protein_id=WP_016532683.1;transl_table=11 NZ_CP085478.1 RefSeq gene 592552 594021 . + . ID=gene-LI478_RS02935;Name=tolC;gbkey=Gene;gene=tolC;gene_biotype=protein_coding;locus_tag=LI478_RS02935 NZ_CP085478.1 Protein Homology CDS 592552 594021 . + 0 ID=cds-WP_004150921.1;Parent=gene-LI478_RS02935;Dbxref=Genbank:WP_004150921.1;Name=WP_004150921.1;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;gene=tolC;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228876.1;locus_tag=LI478_RS02935;product=outer membrane channel protein TolC;protein_id=WP_004150921.1;transl_table=11 NZ_CP085478.1 RefSeq gene 594189 594860 . + . ID=gene-LI478_RS02940;Name=LI478_RS02940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02940 NZ_CP085478.1 Protein Homology CDS 594189 594860 . + 0 ID=cds-WP_002916849.1;Parent=gene-LI478_RS02940;Dbxref=Genbank:WP_002916849.1;Name=WP_002916849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228877.1;locus_tag=LI478_RS02940;product=DUF1190 family protein;protein_id=WP_002916849.1;transl_table=11 NZ_CP085478.1 RefSeq gene 594866 596026 . + . ID=gene-LI478_RS02945;Name=LI478_RS02945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02945 NZ_CP085478.1 Protein Homology CDS 594866 596026 . + 0 ID=cds-WP_004900674.1;Parent=gene-LI478_RS02945;Dbxref=Genbank:WP_004900674.1;Name=WP_004900674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228878.1;locus_tag=LI478_RS02945;product=glutathionylspermidine synthase family protein;protein_id=WP_004900674.1;transl_table=11 NZ_CP085478.1 RefSeq gene 596071 596862 . - . ID=gene-LI478_RS02950;Name=ygiD;gbkey=Gene;gene=ygiD;gene_biotype=protein_coding;locus_tag=LI478_RS02950 NZ_CP085478.1 Protein Homology CDS 596071 596862 . - 0 ID=cds-WP_102007290.1;Parent=gene-LI478_RS02950;Dbxref=Genbank:WP_102007290.1;Name=WP_102007290.1;gbkey=CDS;gene=ygiD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228879.1;locus_tag=LI478_RS02950;product=4%2C5-DOPA dioxygenase extradiol;protein_id=WP_102007290.1;transl_table=11 NZ_CP085478.1 RefSeq gene 597049 597819 . + . ID=gene-LI478_RS02955;Name=zupT;gbkey=Gene;gene=zupT;gene_biotype=protein_coding;locus_tag=LI478_RS02955 NZ_CP085478.1 Protein Homology CDS 597049 597819 . + 0 ID=cds-WP_064153291.1;Parent=gene-LI478_RS02955;Dbxref=Genbank:WP_064153291.1;Name=WP_064153291.1;gbkey=CDS;gene=zupT;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228880.1;locus_tag=LI478_RS02955;product=zinc transporter ZupT;protein_id=WP_064153291.1;transl_table=11 NZ_CP085478.1 RefSeq gene 597881 598534 . - . ID=gene-LI478_RS02960;Name=ribB;gbkey=Gene;gene=ribB;gene_biotype=protein_coding;locus_tag=LI478_RS02960 NZ_CP085478.1 Protein Homology CDS 597881 598534 . - 0 ID=cds-WP_004185664.1;Parent=gene-LI478_RS02960;Dbxref=Genbank:WP_004185664.1;Name=WP_004185664.1;Ontology_term=GO:0008686;gbkey=CDS;gene=ribB;go_function=3%2C4-dihydroxy-2-butanone-4-phosphate synthase activity|0008686||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228881.1;locus_tag=LI478_RS02960;product=3%2C4-dihydroxy-2-butanone-4-phosphate synthase;protein_id=WP_004185664.1;transl_table=11 NZ_CP085478.1 cmsearch riboswitch 598640 598791 . - . ID=id-NZ_CP085478.1:598640..598791;Dbxref=RFAM:RF00050;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_CP085478.1 RefSeq gene 598912 599184 . + . ID=gene-LI478_RS02965;Name=LI478_RS02965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02965 NZ_CP085478.1 Protein Homology CDS 598912 599184 . + 0 ID=cds-WP_002916856.1;Parent=gene-LI478_RS02965;Dbxref=Genbank:WP_002916856.1;Name=WP_002916856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228882.1;locus_tag=LI478_RS02965;product=accessory factor UbiK family protein;protein_id=WP_002916856.1;transl_table=11 NZ_CP085478.1 RefSeq gene 599220 599417 . - . ID=gene-LI478_RS02970;Name=glgS;gbkey=Gene;gene=glgS;gene_biotype=protein_coding;locus_tag=LI478_RS02970 NZ_CP085478.1 Protein Homology CDS 599220 599417 . - 0 ID=cds-WP_227394171.1;Parent=gene-LI478_RS02970;Dbxref=Genbank:WP_227394171.1;Name=WP_227394171.1;gbkey=CDS;gene=glgS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228883.1;locus_tag=LI478_RS02970;product=cell surface composition regulator GlgS;protein_id=WP_227394171.1;transl_table=11 NZ_CP085478.1 RefSeq gene 599409 599558 . + . ID=gene-LI478_RS02975;Name=LI478_RS02975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02975 NZ_CP085478.1 Protein Homology CDS 599409 599558 . + 0 ID=cds-WP_004144536.1;Parent=gene-LI478_RS02975;Dbxref=Genbank:WP_004144536.1;Name=WP_004144536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228884.1;locus_tag=LI478_RS02975;product=hypothetical protein;protein_id=WP_004144536.1;transl_table=11 NZ_CP085478.1 RefSeq gene 599636 601069 . - . ID=gene-LI478_RS02980;Name=hldE;gbkey=Gene;gene=hldE;gene_biotype=protein_coding;locus_tag=LI478_RS02980 NZ_CP085478.1 Protein Homology CDS 599636 601069 . - 0 ID=cds-WP_002916858.1;Parent=gene-LI478_RS02980;Dbxref=Genbank:WP_002916858.1;Name=WP_002916858.1;Ontology_term=GO:0005975,GO:0009058,GO:0016779;gbkey=CDS;gene=hldE;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=carbohydrate metabolic process|0005975||IEA,biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228885.1;locus_tag=LI478_RS02980;product=bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE;protein_id=WP_002916858.1;transl_table=11 NZ_CP085478.1 RefSeq gene 601128 603965 . - . ID=gene-LI478_RS02985;Name=glnE;gbkey=Gene;gene=glnE;gene_biotype=protein_coding;locus_tag=LI478_RS02985 NZ_CP085478.1 Protein Homology CDS 601128 603965 . - 0 ID=cds-WP_064153289.1;Parent=gene-LI478_RS02985;Dbxref=Genbank:WP_064153289.1;Name=WP_064153289.1;Ontology_term=GO:0008882;gbkey=CDS;gene=glnE;go_function=[glutamate-ammonia-ligase] adenylyltransferase activity|0008882||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228886.1;locus_tag=LI478_RS02985;product=bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase;protein_id=WP_064153289.1;transl_table=11 NZ_CP085478.1 RefSeq gene 603986 605284 . - . ID=gene-LI478_RS02990;Name=LI478_RS02990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02990 NZ_CP085478.1 Protein Homology CDS 603986 605284 . - 0 ID=cds-WP_032412426.1;Parent=gene-LI478_RS02990;Dbxref=Genbank:WP_032412426.1;Name=WP_032412426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228887.1;locus_tag=LI478_RS02990;product=inorganic triphosphatase;protein_id=WP_032412426.1;transl_table=11 NZ_CP085478.1 RefSeq gene 605499 606119 . + . ID=gene-LI478_RS02995;Name=LI478_RS02995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS02995 NZ_CP085478.1 Protein Homology CDS 605499 606119 . + 0 ID=cds-WP_002916862.1;Parent=gene-LI478_RS02995;Dbxref=Genbank:WP_002916862.1;Name=WP_002916862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228888.1;locus_tag=LI478_RS02995;product=TIGR04211 family SH3 domain-containing protein;protein_id=WP_002916862.1;transl_table=11 NZ_CP085478.1 RefSeq gene 606181 607422 . + . ID=gene-LI478_RS03000;Name=LI478_RS03000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS03000 NZ_CP085478.1 Protein Homology CDS 606181 607422 . + 0 ID=cds-WP_002916864.1;Parent=gene-LI478_RS03000;Dbxref=Genbank:WP_002916864.1;Name=WP_002916864.1;Ontology_term=GO:0001680,GO:0003723,GO:0004810,GO:0005524;gbkey=CDS;go_function=RNA binding|0003723||IEA,CCA tRNA nucleotidyltransferase|0004810||IEA,ATP binding|0005524||IEA;go_process=tRNA 3'-terminal CCA addition|0001680||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228889.1;locus_tag=LI478_RS03000;product=multifunctional CCA addition/repair protein;protein_id=WP_002916864.1;transl_table=11 NZ_CP085478.1 RefSeq gene 607434 608255 . - . ID=gene-LI478_RS03005;Name=bacA;gbkey=Gene;gene=bacA;gene_biotype=protein_coding;locus_tag=LI478_RS03005 NZ_CP085478.1 Protein Homology CDS 607434 608255 . - 0 ID=cds-WP_004144532.1;Parent=gene-LI478_RS03005;Dbxref=Genbank:WP_004144532.1;Name=WP_004144532.1;Ontology_term=GO:0016311,GO:0050380,GO:0016020;gbkey=CDS;gene=bacA;go_component=membrane|0016020||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311967.1;locus_tag=LI478_RS03005;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_004144532.1;transl_table=11 NZ_CP085478.1 RefSeq gene 608454 608837 . - . ID=gene-LI478_RS03010;Name=folB;gbkey=Gene;gene=folB;gene_biotype=protein_coding;locus_tag=LI478_RS03010 NZ_CP085478.1 Protein Homology CDS 608454 608837 . - 0 ID=cds-WP_004150923.1;Parent=gene-LI478_RS03010;Dbxref=Genbank:WP_004150923.1;Name=WP_004150923.1;Ontology_term=GO:0006760,GO:0004150;gbkey=CDS;gene=folB;go_function=dihydroneopterin aldolase activity|0004150||IEA;go_process=folic acid-containing compound metabolic process|0006760||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228891.1;locus_tag=LI478_RS03010;product=bifunctional dihydroneopterin aldolase/7%2C8-dihydroneopterin epimerase;protein_id=WP_004150923.1;transl_table=11 NZ_CP085478.1 RefSeq gene 608945 609562 . + . ID=gene-LI478_RS03015;Name=plsY;gbkey=Gene;gene=plsY;gene_biotype=protein_coding;locus_tag=LI478_RS03015 NZ_CP085478.1 Protein Homology CDS 608945 609562 . + 0 ID=cds-WP_004144530.1;Parent=gene-LI478_RS03015;Dbxref=Genbank:WP_004144530.1;Name=WP_004144530.1;Ontology_term=GO:0006654,GO:0008374,GO:0005886;gbkey=CDS;gene=plsY;go_component=plasma membrane|0005886||IEA;go_function=O-acyltransferase activity|0008374||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228892.1;locus_tag=LI478_RS03015;product=glycerol-3-phosphate 1-O-acyltransferase PlsY;protein_id=WP_004144530.1;transl_table=11 NZ_CP085478.1 RefSeq gene 609694 609813 . + . ID=gene-LI478_RS03020;Name=LI478_RS03020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS03020 NZ_CP085478.1 Protein Homology CDS 609694 609813 . + 0 ID=cds-WP_020324810.1;Parent=gene-LI478_RS03020;Dbxref=Genbank:WP_020324810.1;Name=WP_020324810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228893.1;locus_tag=LI478_RS03020;product=hypothetical protein;protein_id=WP_020324810.1;transl_table=11 NZ_CP085478.1 RefSeq gene 609824 609970 . - . ID=gene-LI478_RS03025;Name=LI478_RS03025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS03025 NZ_CP085478.1 Protein Homology CDS 609824 609970 . - 0 ID=cds-WP_004144529.1;Parent=gene-LI478_RS03025;Dbxref=Genbank:WP_004144529.1;Name=WP_004144529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228894.1;locus_tag=LI478_RS03025;product=short-chain dehydrogenase;protein_id=WP_004144529.1;transl_table=11 NZ_CP085478.1 RefSeq gene 609960 610784 . + . ID=gene-LI478_RS03030;Name=LI478_RS03030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS03030 NZ_CP085478.1 Protein Homology CDS 609960 610784 . + 0 ID=cds-WP_002916869.1;Parent=gene-LI478_RS03030;Dbxref=Genbank:WP_002916869.1;Name=WP_002916869.1;Ontology_term=GO:0006807,GO:0016151;gbkey=CDS;go_function=nickel cation binding|0016151||IEA;go_process=nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228895.1;locus_tag=LI478_RS03030;product=urease accessory protein UreD;protein_id=WP_002916869.1;transl_table=11 NZ_CP085478.1 RefSeq gene 610794 611096 . + . ID=gene-LI478_RS03035;Name=LI478_RS03035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS03035 NZ_CP085478.1 Protein Homology CDS 610794 611096 . + 0 ID=cds-WP_002916871.1;Parent=gene-LI478_RS03035;Dbxref=Genbank:WP_002916871.1;Name=WP_002916871.1;Ontology_term=GO:0043419,GO:0009039,GO:0016151;gbkey=CDS;go_function=urease activity|0009039||IEA,nickel cation binding|0016151||IEA;go_process=urea catabolic process|0043419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228896.1;locus_tag=LI478_RS03035;product=urease subunit gamma;protein_id=WP_002916871.1;transl_table=11 NZ_CP085478.1 RefSeq gene 611106 611426 . + . ID=gene-LI478_RS03040;Name=LI478_RS03040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS03040 NZ_CP085478.1 Protein Homology CDS 611106 611426 . + 0 ID=cds-WP_002916872.1;Parent=gene-LI478_RS03040;Dbxref=Genbank:WP_002916872.1;Name=WP_002916872.1;Ontology_term=GO:0043419,GO:0035550;gbkey=CDS;go_component=urease complex|0035550||IEA;go_process=urea catabolic process|0043419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228897.1;locus_tag=LI478_RS03040;product=urease subunit beta;protein_id=WP_002916872.1;transl_table=11 NZ_CP085478.1 RefSeq gene 611419 613122 . + . ID=gene-LI478_RS03045;Name=ureC;gbkey=Gene;gene=ureC;gene_biotype=protein_coding;locus_tag=LI478_RS03045 NZ_CP085478.1 Protein Homology CDS 611419 613122 . + 0 ID=cds-WP_064153288.1;Parent=gene-LI478_RS03045;Dbxref=Genbank:WP_064153288.1;Name=WP_064153288.1;Ontology_term=GO:0019627,GO:0009039,GO:0016151;gbkey=CDS;gene=ureC;go_function=urease activity|0009039||IEA,nickel cation binding|0016151||IEA;go_process=urea metabolic process|0019627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228898.1;locus_tag=LI478_RS03045;product=urease subunit alpha;protein_id=WP_064153288.1;transl_table=11 NZ_CP085478.1 RefSeq gene 613132 613608 . + . ID=gene-LI478_RS03050;Name=ureE;gbkey=Gene;gene=ureE;gene_biotype=protein_coding;locus_tag=LI478_RS03050 NZ_CP085478.1 Protein Homology CDS 613132 613608 . + 0 ID=cds-WP_002916875.1;Parent=gene-LI478_RS03050;Dbxref=Genbank:WP_002916875.1;Name=WP_002916875.1;Ontology_term=GO:0006457,GO:0019627,GO:0065003,GO:0016151;gbkey=CDS;gene=ureE;go_function=nickel cation binding|0016151||IEA;go_process=protein folding|0006457||IEA,urea metabolic process|0019627||IEA,protein-containing complex assembly|0065003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228899.1;locus_tag=LI478_RS03050;product=urease accessory protein UreE;protein_id=WP_002916875.1;transl_table=11 NZ_CP085478.1 RefSeq gene 613610 614284 . + . ID=gene-LI478_RS03055;Name=LI478_RS03055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS03055 NZ_CP085478.1 Protein Homology CDS 613610 614284 . + 0 ID=cds-WP_004150924.1;Parent=gene-LI478_RS03055;Dbxref=Genbank:WP_004150924.1;Name=WP_004150924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228900.1;locus_tag=LI478_RS03055;product=urease accessory protein UreF;protein_id=WP_004150924.1;transl_table=11 NZ_CP085478.1 RefSeq gene 614293 614910 . + . ID=gene-LI478_RS03060;Name=ureG;gbkey=Gene;gene=ureG;gene_biotype=protein_coding;locus_tag=LI478_RS03060 NZ_CP085478.1 Protein Homology CDS 614293 614910 . + 0 ID=cds-WP_002916877.1;Parent=gene-LI478_RS03060;Dbxref=Genbank:WP_002916877.1;Name=WP_002916877.1;Ontology_term=GO:0019627,GO:0016530,GO:0046872;gbkey=CDS;gene=ureG;go_function=metallochaperone activity|0016530||IEA,metal ion binding|0046872||IEA;go_process=urea metabolic process|0019627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228901.1;locus_tag=LI478_RS03060;product=urease accessory protein UreG;protein_id=WP_002916877.1;transl_table=11 NZ_CP085478.1 RefSeq gene 615064 616671 . + . ID=gene-LI478_RS03065;Name=LI478_RS03065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS03065 NZ_CP085478.1 Protein Homology CDS 615064 616671 . + 0 ID=cds-WP_019725289.1;Parent=gene-LI478_RS03065;Dbxref=Genbank:WP_019725289.1;Name=WP_019725289.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228902.1;locus_tag=LI478_RS03065;product=cytosine permease;protein_id=WP_019725289.1;transl_table=11 NZ_CP085478.1 RefSeq gene 616716 617729 . - . ID=gene-LI478_RS03070;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=LI478_RS03070 NZ_CP085478.1 Protein Homology CDS 616716 617729 . - 0 ID=cds-WP_002916879.1;Parent=gene-LI478_RS03070;Dbxref=Genbank:WP_002916879.1;Name=WP_002916879.1;Ontology_term=GO:0006400;gbkey=CDS;gene=tsaD;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001264383.1;locus_tag=LI478_RS03070;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=WP_002916879.1;transl_table=11 NZ_CP085478.1 RefSeq gene 617967 618182 . + . ID=gene-LI478_RS03075;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=LI478_RS03075 NZ_CP085478.1 Protein Homology CDS 617967 618182 . + 0 ID=cds-WP_001144069.1;Parent=gene-LI478_RS03075;Dbxref=Genbank:WP_001144069.1;Name=WP_001144069.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsU;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311975.1;locus_tag=LI478_RS03075;product=30S ribosomal protein S21;protein_id=WP_001144069.1;transl_table=11 NZ_CP085478.1 RefSeq gene 618294 620039 . + . ID=gene-LI478_RS03080;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=LI478_RS03080 NZ_CP085478.1 Protein Homology CDS 618294 620039 . + 0 ID=cds-WP_102007291.1;Parent=gene-LI478_RS03080;Dbxref=Genbank:WP_102007291.1;Name=WP_102007291.1;Ontology_term=GO:0006269,GO:0003896;gbkey=CDS;gene=dnaG;go_function=DNA primase activity|0003896||IEA;go_process=DNA replication%2C synthesis of RNA primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228905.1;locus_tag=LI478_RS03080;product=DNA primase;protein_id=WP_102007291.1;transl_table=11 NZ_CP085478.1 RefSeq gene 620258 622099 . + . ID=gene-LI478_RS03085;Name=rpoD;gbkey=Gene;gene=rpoD;gene_biotype=protein_coding;locus_tag=LI478_RS03085 NZ_CP085478.1 Protein Homology CDS 620258 622099 . + 0 ID=cds-WP_004174339.1;Parent=gene-LI478_RS03085;Dbxref=Genbank:WP_004174339.1;Name=WP_004174339.1;Ontology_term=GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoD;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228906.1;locus_tag=LI478_RS03085;product=RNA polymerase sigma factor RpoD;protein_id=WP_004174339.1;transl_table=11 NZ_CP085478.1 RefSeq gene 622199 622705 . - . ID=gene-LI478_RS03090;Name=mug;gbkey=Gene;gene=mug;gene_biotype=protein_coding;locus_tag=LI478_RS03090 NZ_CP085478.1 Protein Homology CDS 622199 622705 . - 0 ID=cds-WP_002917636.1;Parent=gene-LI478_RS03090;Dbxref=Genbank:WP_002917636.1;Name=WP_002917636.1;Ontology_term=GO:0006285,GO:0000700;gbkey=CDS;gene=mug;go_function=mismatch base pair DNA N-glycosylase activity|0000700||IEA;go_process=base-excision repair%2C AP site formation|0006285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228907.1;locus_tag=LI478_RS03090;product=G/U mismatch-specific DNA glycosylase;protein_id=WP_002917636.1;transl_table=11 NZ_CP085478.1 RefSeq gene 622830 622905 . + . ID=gene-LI478_RS03095;Name=LI478_RS03095;gbkey=Gene;gene_biotype=tRNA;locus_tag=LI478_RS03095 NZ_CP085478.1 tRNAscan-SE tRNA 622830 622905 . + . ID=rna-LI478_RS03095;Parent=gene-LI478_RS03095;anticodon=(pos:622863..622865);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS03095;product=tRNA-Ile NZ_CP085478.1 tRNAscan-SE exon 622830 622905 . + . ID=exon-LI478_RS03095-1;Parent=rna-LI478_RS03095;anticodon=(pos:622863..622865);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS03095;product=tRNA-Ile NZ_CP085478.1 RefSeq gene 623491 623718 . + . ID=gene-LI478_RS03100;Name=LI478_RS03100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS03100 NZ_CP085478.1 Protein Homology CDS 623491 623718 . + 0 ID=cds-WP_009484811.1;Parent=gene-LI478_RS03100;Dbxref=Genbank:WP_009484811.1;Name=WP_009484811.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228908.1;locus_tag=LI478_RS03100;product=hypothetical protein;protein_id=WP_009484811.1;transl_table=11 NZ_CP085478.1 RefSeq gene 623787 624152 . - . ID=gene-LI478_RS03105;Name=LI478_RS03105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS03105 NZ_CP085478.1 Protein Homology CDS 623787 624152 . - 0 ID=cds-WP_072198168.1;Parent=gene-LI478_RS03105;Dbxref=Genbank:WP_072198168.1;Name=WP_072198168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228909.1;locus_tag=LI478_RS03105;product=HdeA/HdeB family chaperone;protein_id=WP_072198168.1;transl_table=11 NZ_CP085478.1 RefSeq gene 624454 625068 . + . ID=gene-LI478_RS03110;Name=evgA;gbkey=Gene;gene=evgA;gene_biotype=protein_coding;locus_tag=LI478_RS03110 NZ_CP085478.1 Protein Homology CDS 624454 625068 . + 0 ID=cds-WP_004174237.1;Parent=gene-LI478_RS03110;Dbxref=Genbank:WP_004174237.1;Name=WP_004174237.1;gbkey=CDS;gene=evgA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228910.1;locus_tag=LI478_RS03110;product=acid-sensing system DNA-binding response regulator EvgA;protein_id=WP_004174237.1;transl_table=11 NZ_CP085478.1 RefSeq gene 625073 628315 . + . ID=gene-LI478_RS03115;Name=LI478_RS03115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS03115 NZ_CP085478.1 Protein Homology CDS 625073 628315 . + 0 ID=cds-WP_064153286.1;Parent=gene-LI478_RS03115;Dbxref=Genbank:WP_064153286.1;Name=WP_064153286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228911.1;locus_tag=LI478_RS03115;product=transporter substrate-binding domain-containing protein;protein_id=WP_064153286.1;transl_table=11 NZ_CP085478.1 RefSeq gene 628406 629068 . - . ID=gene-LI478_RS03120;Name=LI478_RS03120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS03120 NZ_CP085478.1 Protein Homology CDS 628406 629068 . - 0 ID=cds-WP_004144810.1;Parent=gene-LI478_RS03120;Dbxref=Genbank:WP_004144810.1;Name=WP_004144810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228912.1;locus_tag=LI478_RS03120;product=YfdX family protein;protein_id=WP_004144810.1;transl_table=11 NZ_CP085478.1 RefSeq gene 629309 629884 . + . ID=gene-LI478_RS03125;Name=LI478_RS03125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS03125 NZ_CP085478.1 Protein Homology CDS 629309 629884 . + 0 ID=cds-WP_002917651.1;Parent=gene-LI478_RS03125;Dbxref=Genbank:WP_002917651.1;Name=WP_002917651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228913.1;locus_tag=LI478_RS03125;product=HdeD family acid-resistance protein;protein_id=WP_002917651.1;transl_table=11 NZ_CP085478.1 RefSeq gene 629911 630216 . + . ID=gene-LI478_RS03130;Name=hdeB;gbkey=Gene;gene=hdeB;gene_biotype=protein_coding;locus_tag=LI478_RS03130 NZ_CP085478.1 Protein Homology CDS 629911 630216 . + 0 ID=cds-WP_002917655.1;Parent=gene-LI478_RS03130;Dbxref=Genbank:WP_002917655.1;Name=WP_002917655.1;gbkey=CDS;gene=hdeB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228914.1;locus_tag=LI478_RS03130;product=acid-activated periplasmic chaperone HdeB;protein_id=WP_002917655.1;transl_table=11 NZ_CP085478.1 RefSeq gene 630262 631065 . - . ID=gene-LI478_RS03135;Name=LI478_RS03135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS03135 NZ_CP085478.1 Protein Homology CDS 630262 631065 . - 0 ID=cds-WP_002917658.1;Parent=gene-LI478_RS03135;Dbxref=Genbank:WP_002917658.1;Name=WP_002917658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228915.1;locus_tag=LI478_RS03135;product=aquaporin;protein_id=WP_002917658.1;transl_table=11 NZ_CP085478.1 RefSeq gene 631119 632942 . - . ID=gene-LI478_RS03140;Name=LI478_RS03140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS03140 NZ_CP085478.1 Protein Homology CDS 631119 632942 . - 0 ID=cds-WP_004174234.1;Parent=gene-LI478_RS03140;Dbxref=Genbank:WP_004174234.1;Name=WP_004174234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228916.1;locus_tag=LI478_RS03140;product=diol dehydratase reactivase subunit alpha;protein_id=WP_004174234.1;transl_table=11 NZ_CP085478.1 RefSeq gene 632955 633380 . - . ID=gene-LI478_RS03145;Name=LI478_RS03145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS03145 NZ_CP085478.1 Protein Homology CDS 632955 633380 . - 0 ID=cds-WP_002917670.1;Parent=gene-LI478_RS03145;Dbxref=Genbank:WP_002917670.1;Name=WP_002917670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228917.1;locus_tag=LI478_RS03145;product=glycerol dehydratase small subunit DhaB3;protein_id=WP_002917670.1;transl_table=11 NZ_CP085478.1 RefSeq gene 633383 633967 . - . ID=gene-LI478_RS03150;Name=LI478_RS03150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS03150 NZ_CP085478.1 Protein Homology CDS 633383 633967 . - 0 ID=cds-WP_009309662.1;Parent=gene-LI478_RS03150;Dbxref=Genbank:WP_009309662.1;Name=WP_009309662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228918.1;locus_tag=LI478_RS03150;product=propanediol/glycerol family dehydratase medium subunit;protein_id=WP_009309662.1;transl_table=11 NZ_CP085478.1 RefSeq gene 633980 635647 . - . ID=gene-LI478_RS03155;Name=LI478_RS03155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS03155 NZ_CP085478.1 Protein Homology CDS 633980 635647 . - 0 ID=cds-WP_002917676.1;Parent=gene-LI478_RS03155;Dbxref=Genbank:WP_002917676.1;Name=WP_002917676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228919.1;locus_tag=LI478_RS03155;product=propanediol/glycerol family dehydratase large subunit;protein_id=WP_002917676.1;transl_table=11 NZ_CP085478.1 RefSeq gene 636061 636489 . + . ID=gene-LI478_RS03160;Name=LI478_RS03160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS03160 NZ_CP085478.1 Protein Homology CDS 636061 636489 . + 0 ID=cds-WP_014599267.1;Parent=gene-LI478_RS03160;Dbxref=Genbank:WP_014599267.1;Name=WP_014599267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014599267.1;locus_tag=LI478_RS03160;product=heme-binding protein;protein_id=WP_014599267.1;transl_table=11 NZ_CP085478.1 RefSeq gene 636511 637674 . + . ID=gene-LI478_RS03165;Name=dhaT;gbkey=Gene;gene=dhaT;gene_biotype=protein_coding;locus_tag=LI478_RS03165 NZ_CP085478.1 Protein Homology CDS 636511 637674 . + 0 ID=cds-WP_004150927.1;Parent=gene-LI478_RS03165;Dbxref=Genbank:WP_004150927.1;Name=WP_004150927.1;gbkey=CDS;gene=dhaT;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228921.1;locus_tag=LI478_RS03165;product=1%2C3-propanediol dehydrogenase;protein_id=WP_004150927.1;transl_table=11 NZ_CP085478.1 RefSeq gene 637695 638048 . + . ID=gene-LI478_RS03170;Name=LI478_RS03170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS03170 NZ_CP085478.1 Protein Homology CDS 637695 638048 . + 0 ID=cds-WP_002917678.1;Parent=gene-LI478_RS03170;Dbxref=Genbank:WP_002917678.1;Name=WP_002917678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228922.1;locus_tag=LI478_RS03170;product=glycerol dehydratase reactivase beta/small subunit family protein;protein_id=WP_002917678.1;transl_table=11 NZ_CP085478.1 RefSeq gene 638049 638579 . + . ID=gene-LI478_RS03175;Name=LI478_RS03175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS03175 NZ_CP085478.1 Protein Homology CDS 638049 638579 . + 0 ID=cds-WP_004210508.1;Parent=gene-LI478_RS03175;Dbxref=Genbank:WP_004210508.1;Name=WP_004210508.1;Ontology_term=GO:0009236,GO:0008817;gbkey=CDS;go_function=corrinoid adenosyltransferase activity|0008817||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228923.1;locus_tag=LI478_RS03175;product=cob(I)yrinic acid a%2Cc-diamide adenosyltransferase;protein_id=WP_004210508.1;transl_table=11 NZ_CP085478.1 RefSeq gene 638557 640482 . - . ID=gene-LI478_RS03180;Name=dhaR;gbkey=Gene;gene=dhaR;gene_biotype=protein_coding;locus_tag=LI478_RS03180 NZ_CP085478.1 Protein Homology CDS 638557 640482 . - 0 ID=cds-WP_002917680.1;Parent=gene-LI478_RS03180;Dbxref=Genbank:WP_002917680.1;Name=WP_002917680.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134,GO:0043565;gbkey=CDS;gene=dhaR;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228924.1;locus_tag=LI478_RS03180;product=dihydroxyacetone kinase operon transcriptional regulator DhaR;protein_id=WP_002917680.1;transl_table=11 NZ_CP085478.1 RefSeq gene 640584 641681 . - . ID=gene-LI478_RS03185;Name=LI478_RS03185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS03185 NZ_CP085478.1 Protein Homology CDS 640584 641681 . - 0 ID=cds-WP_064153280.1;Parent=gene-LI478_RS03185;Dbxref=Genbank:WP_064153280.1;Name=WP_064153280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228925.1;locus_tag=LI478_RS03185;product=glycerol dehydrogenase;protein_id=WP_064153280.1;transl_table=11 NZ_CP085478.1 RefSeq gene 641951 642136 . + . ID=gene-LI478_RS03190;Name=LI478_RS03190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS03190 NZ_CP085478.1 Protein Homology CDS 641951 642136 . + 0 ID=cds-WP_025367873.1;Parent=gene-LI478_RS03190;Dbxref=Genbank:WP_025367873.1;Name=WP_025367873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228926.1;locus_tag=LI478_RS03190;product=hypothetical protein;protein_id=WP_025367873.1;transl_table=11 NZ_CP085478.1 RefSeq gene 642292 643362 . + . ID=gene-LI478_RS03195;Name=dhaK;gbkey=Gene;gene=dhaK;gene_biotype=protein_coding;locus_tag=LI478_RS03195 NZ_CP085478.1 Protein Homology CDS 642292 643362 . + 0 ID=cds-WP_002917682.1;Parent=gene-LI478_RS03195;Dbxref=Genbank:WP_002917682.1;Name=WP_002917682.1;Ontology_term=GO:0006071,GO:0004371;gbkey=CDS;gene=dhaK;go_function=glycerone kinase activity|0004371||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228927.1;locus_tag=LI478_RS03195;product=dihydroxyacetone kinase subunit DhaK;protein_id=WP_002917682.1;transl_table=11 NZ_CP085478.1 RefSeq gene 643373 644005 . + . ID=gene-LI478_RS03200;Name=dhaL;gbkey=Gene;gene=dhaL;gene_biotype=protein_coding;locus_tag=LI478_RS03200 NZ_CP085478.1 Protein Homology CDS 643373 644005 . + 0 ID=cds-WP_004181378.1;Parent=gene-LI478_RS03200;Dbxref=Genbank:WP_004181378.1;Name=WP_004181378.1;Ontology_term=GO:0006071,GO:0004371;gbkey=CDS;gene=dhaL;go_function=glycerone kinase activity|0004371||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228928.1;locus_tag=LI478_RS03200;product=dihydroxyacetone kinase subunit DhaL;protein_id=WP_004181378.1;transl_table=11 NZ_CP085478.1 RefSeq gene 644016 645437 . + . ID=gene-LI478_RS03205;Name=dhaM;gbkey=Gene;gene=dhaM;gene_biotype=protein_coding;locus_tag=LI478_RS03205 NZ_CP085478.1 Protein Homology CDS 644016 645437 . + 0 ID=cds-WP_048995470.1;Parent=gene-LI478_RS03205;Dbxref=Genbank:WP_048995470.1;Name=WP_048995470.1;Ontology_term=GO:0009401,GO:0016310,GO:0019563,GO:0047324,GO:0016020;gbkey=CDS;gene=dhaM;go_component=membrane|0016020||IEA;go_function=phosphoenolpyruvate-glycerone phosphotransferase activity|0047324||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA,glycerol catabolic process|0019563||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228929.1;locus_tag=LI478_RS03205;product=dihydroxyacetone kinase phosphoryl donor subunit DhaM;protein_id=WP_048995470.1;transl_table=11 NZ_CP085478.1 RefSeq gene 645513 647162 . + . ID=gene-LI478_RS03210;Name=LI478_RS03210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS03210 NZ_CP085478.1 Protein Homology CDS 645513 647162 . + 0 ID=cds-WP_004150929.1;Parent=gene-LI478_RS03210;Dbxref=Genbank:WP_004150929.1;Name=WP_004150929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228930.1;locus_tag=LI478_RS03210;product=glycerone kinase;protein_id=WP_004150929.1;transl_table=11 NZ_CP085478.1 RefSeq gene 647318 648094 . - . ID=gene-LI478_RS03215;Name=LI478_RS03215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS03215 NZ_CP085478.1 Protein Homology CDS 647318 648094 . - 0 ID=cds-WP_004144829.1;Parent=gene-LI478_RS03215;Dbxref=Genbank:WP_004144829.1;Name=WP_004144829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228931.1;locus_tag=LI478_RS03215;product=siderophore-interacting protein;protein_id=WP_004144829.1;transl_table=11 NZ_CP085478.1 RefSeq gene 648332 648886 . + . ID=gene-LI478_RS03220;Name=LI478_RS03220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS03220 NZ_CP085478.1 Protein Homology CDS 648332 648886 . + 0 ID=cds-WP_002917718.1;Parent=gene-LI478_RS03220;Dbxref=Genbank:WP_002917718.1;Name=WP_002917718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228933.1;locus_tag=LI478_RS03220;product=PadR family transcriptional regulator;protein_id=WP_002917718.1;transl_table=11 NZ_CP085478.1 RefSeq gene 649144 650523 . + . ID=gene-LI478_RS03225;Name=ygjG;gbkey=Gene;gene=ygjG;gene_biotype=protein_coding;locus_tag=LI478_RS03225 NZ_CP085478.1 Protein Homology CDS 649144 650523 . + 0 ID=cds-WP_004174227.1;Parent=gene-LI478_RS03225;Dbxref=Genbank:WP_004174227.1;Name=WP_004174227.1;Ontology_term=GO:0009447,GO:0033094;gbkey=CDS;gene=ygjG;go_function=butane-1%2C4-diamine:2-oxoglutarate aminotransferase activity|0033094||IEA;go_process=putrescine catabolic process|0009447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228934.1;locus_tag=LI478_RS03225;product=putrescine aminotransferase;protein_id=WP_004174227.1;transl_table=11 NZ_CP085478.1 RefSeq gene 650570 650866 . - . ID=gene-LI478_RS03230;Name=lsrG;gbkey=Gene;gene=lsrG;gene_biotype=protein_coding;locus_tag=LI478_RS03230 NZ_CP085478.1 Protein Homology CDS 650570 650866 . - 0 ID=cds-WP_004181386.1;Parent=gene-LI478_RS03230;Dbxref=Genbank:WP_004181386.1;Name=WP_004181386.1;gbkey=CDS;gene=lsrG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228935.1;locus_tag=LI478_RS03230;product=(4S)-4-hydroxy-5-phosphonooxypentane-2%2C3-dione isomerase;protein_id=WP_004181386.1;transl_table=11 NZ_CP085478.1 RefSeq gene 650863 651750 . - . ID=gene-LI478_RS03235;Name=lsrF;gbkey=Gene;gene=lsrF;gene_biotype=protein_coding;locus_tag=LI478_RS03235 NZ_CP085478.1 Protein Homology CDS 650863 651750 . - 0 ID=cds-WP_002917724.1;Parent=gene-LI478_RS03235;Dbxref=Genbank:WP_002917724.1;Name=WP_002917724.1;Ontology_term=GO:0016829;gbkey=CDS;gene=lsrF;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228936.1;locus_tag=LI478_RS03235;product=3-hydroxy-5-phosphonooxypentane-2%2C4-dione thiolase;protein_id=WP_002917724.1;transl_table=11 NZ_CP085478.1 RefSeq gene 651762 652763 . - . ID=gene-LI478_RS03240;Name=lsrB;gbkey=Gene;gene=lsrB;gene_biotype=protein_coding;locus_tag=LI478_RS03240 NZ_CP085478.1 Protein Homology CDS 651762 652763 . - 0 ID=cds-WP_002917725.1;Parent=gene-LI478_RS03240;Dbxref=Genbank:WP_002917725.1;Name=WP_002917725.1;gbkey=CDS;gene=lsrB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228937.1;locus_tag=LI478_RS03240;product=autoinducer 2 ABC transporter substrate-binding protein LsrB;protein_id=WP_002917725.1;transl_table=11 NZ_CP085478.1 RefSeq gene 652765 653763 . - . ID=gene-LI478_RS03245;Name=LI478_RS03245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS03245 NZ_CP085478.1 Protein Homology CDS 652765 653763 . - 0 ID=cds-WP_002917727.1;Parent=gene-LI478_RS03245;Dbxref=Genbank:WP_002917727.1;Name=WP_002917727.1;Note=with IsrABC is involved with autoinducer 2 import;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228938.1;locus_tag=LI478_RS03245;product=histidine kinase;protein_id=WP_002917727.1;transl_table=11 NZ_CP085478.1 RefSeq gene 653764 654798 . - . ID=gene-LI478_RS03250;Name=lsrC;gbkey=Gene;gene=lsrC;gene_biotype=protein_coding;locus_tag=LI478_RS03250 NZ_CP085478.1 Protein Homology CDS 653764 654798 . - 0 ID=cds-WP_004185768.1;Parent=gene-LI478_RS03250;Dbxref=Genbank:WP_004185768.1;Name=WP_004185768.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=lsrC;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228939.1;locus_tag=LI478_RS03250;product=autoinducer 2 ABC transporter permease LsrC;protein_id=WP_004185768.1;transl_table=11 NZ_CP085478.1 RefSeq gene 654795 656282 . - . ID=gene-LI478_RS03255;Name=lsrA;gbkey=Gene;gene=lsrA;gene_biotype=protein_coding;locus_tag=LI478_RS03255 NZ_CP085478.1 Protein Homology CDS 654795 656282 . - 0 ID=cds-WP_227394172.1;Parent=gene-LI478_RS03255;Dbxref=Genbank:WP_227394172.1;Name=WP_227394172.1;Ontology_term=GO:1905887,GO:0005524,GO:0042626,GO:0016020;gbkey=CDS;gene=lsrA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=autoinducer AI-2 transmembrane transport|1905887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228940.1;locus_tag=LI478_RS03255;product=autoinducer 2 ABC transporter ATP-binding protein LsrA;protein_id=WP_227394172.1;transl_table=11 NZ_CP085478.1 RefSeq gene 656501 657472 . + . ID=gene-LI478_RS03260;Name=lsrR;gbkey=Gene;gene=lsrR;gene_biotype=protein_coding;locus_tag=LI478_RS03260 NZ_CP085478.1 Protein Homology CDS 656501 657472 . + 0 ID=cds-WP_004144837.1;Parent=gene-LI478_RS03260;Dbxref=Genbank:WP_004144837.1;Name=WP_004144837.1;gbkey=CDS;gene=lsrR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228941.1;locus_tag=LI478_RS03260;product=transcriptional regulator LsrR;protein_id=WP_004144837.1;transl_table=11 NZ_CP085478.1 RefSeq gene 657510 659108 . + . ID=gene-LI478_RS03265;Name=lsrK;gbkey=Gene;gene=lsrK;gene_biotype=protein_coding;locus_tag=LI478_RS03265 NZ_CP085478.1 Protein Homology CDS 657510 659108 . + 0 ID=cds-WP_064153273.1;Parent=gene-LI478_RS03265;Dbxref=Genbank:WP_064153273.1;Name=WP_064153273.1;Ontology_term=GO:0005975,GO:0009372,GO:0071518;gbkey=CDS;gene=lsrK;go_function=autoinducer-2 kinase activity|0071518||IEA;go_process=carbohydrate metabolic process|0005975||IEA,quorum sensing|0009372||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228942.1;locus_tag=LI478_RS03265;product=autoinducer-2 kinase;protein_id=WP_064153273.1;transl_table=11 NZ_CP085478.1 RefSeq gene 659291 661312 . + . ID=gene-LI478_RS03270;Name=LI478_RS03270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS03270 NZ_CP085478.1 Protein Homology CDS 659291 661312 . + 0 ID=cds-WP_064153271.1;Parent=gene-LI478_RS03270;Dbxref=Genbank:WP_064153271.1;Name=WP_064153271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228943.1;locus_tag=LI478_RS03270;product=NADPH-dependent 2%2C4-dienoyl-CoA reductase;protein_id=WP_064153271.1;transl_table=11 NZ_CP085478.1 RefSeq gene 661421 662551 . - . ID=gene-LI478_RS03275;Name=rlmG;gbkey=Gene;gene=rlmG;gene_biotype=protein_coding;locus_tag=LI478_RS03275 NZ_CP085478.1 Protein Homology CDS 661421 662551 . - 0 ID=cds-WP_064153268.1;Parent=gene-LI478_RS03275;Dbxref=Genbank:WP_064153268.1;Name=WP_064153268.1;Ontology_term=GO:0031167,GO:0003676,GO:0008990;gbkey=CDS;gene=rlmG;go_function=nucleic acid binding|0003676||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228944.1;locus_tag=LI478_RS03275;product=23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG;protein_id=WP_064153268.1;transl_table=11 NZ_CP085478.1 RefSeq gene 662637 663344 . - . ID=gene-LI478_RS03280;Name=LI478_RS03280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS03280 NZ_CP085478.1 Protein Homology CDS 662637 663344 . - 0 ID=cds-WP_002917889.1;Parent=gene-LI478_RS03280;Dbxref=Genbank:WP_002917889.1;Name=WP_002917889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228945.1;locus_tag=LI478_RS03280;product=B3/4 domain-containing protein;protein_id=WP_002917889.1;transl_table=11 NZ_CP085478.1 RefSeq gene 663388 663990 . + . ID=gene-LI478_RS03285;Name=LI478_RS03285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS03285 NZ_CP085478.1 Protein Homology CDS 663388 663990 . + 0 ID=cds-WP_064153266.1;Parent=gene-LI478_RS03285;Dbxref=Genbank:WP_064153266.1;Name=WP_064153266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228946.1;locus_tag=LI478_RS03285;product=XRE family transcriptional regulator;protein_id=WP_064153266.1;transl_table=11 NZ_CP085478.1 RefSeq gene 664010 664510 . + . ID=gene-LI478_RS03290;Name=LI478_RS03290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS03290 NZ_CP085478.1 Protein Homology CDS 664010 664510 . + 0 ID=cds-WP_002917891.1;Parent=gene-LI478_RS03290;Dbxref=Genbank:WP_002917891.1;Name=WP_002917891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228947.1;locus_tag=LI478_RS03290;product=M48 family metallopeptidase;protein_id=WP_002917891.1;transl_table=11 NZ_CP085478.1 RefSeq gene 664584 665573 . + . ID=gene-LI478_RS03295;Name=LI478_RS03295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS03295 NZ_CP085478.1 Protein Homology CDS 664584 665573 . + 0 ID=cds-WP_004181399.1;Parent=gene-LI478_RS03295;Dbxref=Genbank:WP_004181399.1;Name=WP_004181399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228948.1;locus_tag=LI478_RS03295;product=Gfo/Idh/MocA family oxidoreductase;protein_id=WP_004181399.1;transl_table=11 NZ_CP085478.1 RefSeq gene 665845 666816 . + . ID=gene-LI478_RS03300;Name=LI478_RS03300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS03300 NZ_CP085478.1 Protein Homology CDS 665845 666816 . + 0 ID=cds-WP_004144845.1;Parent=gene-LI478_RS03300;Dbxref=Genbank:WP_004144845.1;Name=WP_004144845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228949.1;locus_tag=LI478_RS03300;product=TerC family protein;protein_id=WP_004144845.1;transl_table=11 NZ_CP085478.1 RefSeq gene 667083 668330 . + . ID=gene-LI478_RS03305;Name=sstT;gbkey=Gene;gene=sstT;gene_biotype=protein_coding;locus_tag=LI478_RS03305 NZ_CP085478.1 Protein Homology CDS 667083 668330 . + 0 ID=cds-WP_002917895.1;Parent=gene-LI478_RS03305;Dbxref=Genbank:WP_002917895.1;Name=WP_002917895.1;Ontology_term=GO:0015826,GO:0032329,GO:0015293,GO:0016020;gbkey=CDS;gene=sstT;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=threonine transport|0015826||IEA,serine transport|0032329||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228950.1;locus_tag=LI478_RS03305;product=serine/threonine transporter SstT;protein_id=WP_002917895.1;transl_table=11 NZ_CP085478.1 RefSeq gene 668346 668900 . - . ID=gene-LI478_RS03310;Name=LI478_RS03310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS03310 NZ_CP085478.1 Protein Homology CDS 668346 668900 . - 0 ID=cds-WP_002917897.1;Parent=gene-LI478_RS03310;Dbxref=Genbank:WP_002917897.1;Name=WP_002917897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228951.1;locus_tag=LI478_RS03310;product=YgjV family protein;protein_id=WP_002917897.1;transl_table=11 NZ_CP085478.1 RefSeq gene 669030 670517 . - . ID=gene-LI478_RS03315;Name=LI478_RS03315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS03315 NZ_CP085478.1 Protein Homology CDS 669030 670517 . - 0 ID=cds-WP_002917898.1;Parent=gene-LI478_RS03315;Dbxref=Genbank:WP_002917898.1;Name=WP_002917898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001199350.1;locus_tag=LI478_RS03315;product=altronate dehydratase family protein;protein_id=WP_002917898.1;transl_table=11 NZ_CP085478.1 RefSeq gene 670536 671948 . - . ID=gene-LI478_RS03320;Name=uxaC;gbkey=Gene;gene=uxaC;gene_biotype=protein_coding;locus_tag=LI478_RS03320 NZ_CP085478.1 Protein Homology CDS 670536 671948 . - 0 ID=cds-WP_002917899.1;Parent=gene-LI478_RS03320;Dbxref=Genbank:WP_002917899.1;Name=WP_002917899.1;Ontology_term=GO:0006064,GO:0008880;gbkey=CDS;gene=uxaC;go_function=glucuronate isomerase activity|0008880||IEA;go_process=glucuronate catabolic process|0006064||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077755.1;locus_tag=LI478_RS03320;product=glucuronate isomerase;protein_id=WP_002917899.1;transl_table=11 NZ_CP085478.1 RefSeq gene 672429 673730 . + . ID=gene-LI478_RS03325;Name=LI478_RS03325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS03325 NZ_CP085478.1 Protein Homology CDS 672429 673730 . + 0 ID=cds-WP_002917905.1;Parent=gene-LI478_RS03325;Dbxref=Genbank:WP_002917905.1;Name=WP_002917905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228954.1;locus_tag=LI478_RS03325;product=MFS transporter;protein_id=WP_002917905.1;transl_table=11 NZ_CP085478.1 RefSeq gene 673858 674634 . + . ID=gene-LI478_RS03330;Name=exuR;gbkey=Gene;gene=exuR;gene_biotype=protein_coding;locus_tag=LI478_RS03330 NZ_CP085478.1 Protein Homology CDS 673858 674634 . + 0 ID=cds-WP_064153263.1;Parent=gene-LI478_RS03330;Dbxref=Genbank:WP_064153263.1;Name=WP_064153263.1;gbkey=CDS;gene=exuR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228955.1;locus_tag=LI478_RS03330;product=transcriptional regulator ExuR;protein_id=WP_064153263.1;transl_table=11 NZ_CP085478.1 RefSeq gene 674976 675638 . + . ID=gene-LI478_RS03335;Name=LI478_RS03335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS03335 NZ_CP085478.1 Protein Homology CDS 674976 675638 . + 0 ID=cds-WP_002917909.1;Parent=gene-LI478_RS03335;Dbxref=Genbank:WP_002917909.1;Name=WP_002917909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228956.1;locus_tag=LI478_RS03335;product=DedA family protein;protein_id=WP_002917909.1;transl_table=11 NZ_CP085478.1 RefSeq gene 675647 676024 . + . ID=gene-LI478_RS03340;Name=mzrA;gbkey=Gene;gene=mzrA;gene_biotype=protein_coding;locus_tag=LI478_RS03340 NZ_CP085478.1 Protein Homology CDS 675647 676024 . + 0 ID=cds-WP_004218213.1;Parent=gene-LI478_RS03340;Dbxref=Genbank:WP_004218213.1;Name=WP_004218213.1;gbkey=CDS;gene=mzrA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228957.1;locus_tag=LI478_RS03340;product=EnvZ/OmpR regulon moderator MzrA;protein_id=WP_004218213.1;transl_table=11 NZ_CP085478.1 RefSeq gene 676174 676542 . + . ID=gene-LI478_RS03345;Name=LI478_RS03345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS03345 NZ_CP085478.1 Protein Homology CDS 676174 676542 . + 0 ID=cds-WP_004144860.1;Parent=gene-LI478_RS03345;Dbxref=Genbank:WP_004144860.1;Name=WP_004144860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228958.1;locus_tag=LI478_RS03345;product=DUF1090 domain-containing protein;protein_id=WP_004144860.1;transl_table=11 NZ_CP085478.1 RefSeq gene 676588 676893 . + . ID=gene-LI478_RS03350;Name=LI478_RS03350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS03350 NZ_CP085478.1 Protein Homology CDS 676588 676893 . + 0 ID=cds-WP_002917916.1;Parent=gene-LI478_RS03350;Dbxref=Genbank:WP_002917916.1;Name=WP_002917916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228959.1;locus_tag=LI478_RS03350;product=YqjD family protein;protein_id=WP_002917916.1;transl_table=11 NZ_CP085478.1 RefSeq gene 676896 677294 . + . ID=gene-LI478_RS03355;Name=LI478_RS03355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS03355 NZ_CP085478.1 Protein Homology CDS 676896 677294 . + 0 ID=cds-WP_002917917.1;Parent=gene-LI478_RS03355;Dbxref=Genbank:WP_002917917.1;Name=WP_002917917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228960.1;locus_tag=LI478_RS03355;product=phage holin family protein;protein_id=WP_002917917.1;transl_table=11 NZ_CP085478.1 RefSeq gene 677291 677587 . + . ID=gene-LI478_RS03360;Name=LI478_RS03360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS03360 NZ_CP085478.1 Protein Homology CDS 677291 677587 . + 0 ID=cds-WP_002917918.1;Parent=gene-LI478_RS03360;Dbxref=Genbank:WP_002917918.1;Name=WP_002917918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228961.1;locus_tag=LI478_RS03360;product=YqjK-like family protein;protein_id=WP_002917918.1;transl_table=11 NZ_CP085478.1 RefSeq gene 677932 678324 . + . ID=gene-LI478_RS03365;Name=LI478_RS03365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS03365 NZ_CP085478.1 Protein Homology CDS 677932 678324 . + 0 ID=cds-WP_002917920.1;Parent=gene-LI478_RS03365;Dbxref=Genbank:WP_002917920.1;Name=WP_002917920.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008503138.1;locus_tag=LI478_RS03365;product=DoxX family protein;protein_id=WP_002917920.1;transl_table=11 NZ_CP085478.1 RefSeq gene 678405 679391 . + . ID=gene-LI478_RS03370;Name=LI478_RS03370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS03370 NZ_CP085478.1 Protein Homology CDS 678405 679391 . + 0 ID=cds-WP_002917922.1;Parent=gene-LI478_RS03370;Dbxref=Genbank:WP_002917922.1;Name=WP_002917922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228963.1;locus_tag=LI478_RS03370;product=glutathione S-transferase family protein;protein_id=WP_002917922.1;transl_table=11 NZ_CP085478.1 RefSeq gene 679518 679886 . + . ID=gene-LI478_RS03375;Name=LI478_RS03375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS03375 NZ_CP085478.1 Protein Homology CDS 679518 679886 . + 0 ID=cds-WP_002917923.1;Parent=gene-LI478_RS03375;Dbxref=Genbank:WP_002917923.1;Name=WP_002917923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228964.1;locus_tag=LI478_RS03375;product=DUF805 domain-containing protein;protein_id=WP_002917923.1;transl_table=11 NZ_CP085478.1 RefSeq gene 679928 680824 . - . ID=gene-LI478_RS03380;Name=LI478_RS03380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS03380 NZ_CP085478.1 Protein Homology CDS 679928 680824 . - 0 ID=cds-WP_004144865.1;Parent=gene-LI478_RS03380;Dbxref=Genbank:WP_004144865.1;Name=WP_004144865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228965.1;locus_tag=LI478_RS03380;product=LysR family transcriptional regulator;protein_id=WP_004144865.1;transl_table=11 NZ_CP085478.1 RefSeq gene 680929 681630 . + . ID=gene-LI478_RS03385;Name=LI478_RS03385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS03385 NZ_CP085478.1 Protein Homology CDS 680929 681630 . + 0 ID=cds-WP_002917925.1;Parent=gene-LI478_RS03385;Dbxref=Genbank:WP_002917925.1;Name=WP_002917925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228966.1;locus_tag=LI478_RS03385;product=pirin family protein;protein_id=WP_002917925.1;transl_table=11 NZ_CP085478.1 RefSeq gene 681655 681822 . + . ID=gene-LI478_RS03390;Name=LI478_RS03390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS03390 NZ_CP085478.1 Protein Homology CDS 681655 681822 . + 0 ID=cds-WP_002917926.1;Parent=gene-LI478_RS03390;Dbxref=Genbank:WP_002917926.1;Name=WP_002917926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228967.1;locus_tag=LI478_RS03390;product=hypothetical protein;protein_id=WP_002917926.1;transl_table=11 NZ_CP085478.1 RefSeq gene 681896 682306 . - . ID=gene-LI478_RS03395;Name=LI478_RS03395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS03395 NZ_CP085478.1 Protein Homology CDS 681896 682306 . - 0 ID=cds-WP_004149907.1;Parent=gene-LI478_RS03395;Dbxref=Genbank:WP_004149907.1;Name=WP_004149907.1;Ontology_term=GO:0042597;gbkey=CDS;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228968.1;locus_tag=LI478_RS03395;product=Spy/CpxP family protein refolding chaperone;protein_id=WP_004149907.1;transl_table=11 NZ_CP085478.1 RefSeq gene 682614 683078 . + . ID=gene-LI478_RS03400;Name=LI478_RS03400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS03400 NZ_CP085478.1 Protein Homology CDS 682614 683078 . + 0 ID=cds-WP_004150939.1;Parent=gene-LI478_RS03400;Dbxref=Genbank:WP_004150939.1;Name=WP_004150939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228970.1;locus_tag=LI478_RS03400;product=OB-fold putative lipoprotein;protein_id=WP_004150939.1;transl_table=11 NZ_CP085478.1 RefSeq gene 683539 683921 . - . ID=gene-LI478_RS03405;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=LI478_RS03405 NZ_CP085478.1 cmsearch RNase_P_RNA 683539 683921 . - . ID=rna-LI478_RS03405;Parent=gene-LI478_RS03405;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LI478_RS03405;product=RNase P RNA component class A NZ_CP085478.1 cmsearch exon 683539 683921 . - . ID=exon-LI478_RS03405-1;Parent=rna-LI478_RS03405;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LI478_RS03405;product=RNase P RNA component class A NZ_CP085478.1 RefSeq gene 683954 685099 . - . ID=gene-LI478_RS03410;Name=garK;gbkey=Gene;gene=garK;gene_biotype=protein_coding;locus_tag=LI478_RS03410 NZ_CP085478.1 Protein Homology CDS 683954 685099 . - 0 ID=cds-WP_023288016.1;Parent=gene-LI478_RS03410;Dbxref=Genbank:WP_023288016.1;Name=WP_023288016.1;Ontology_term=GO:0031388,GO:0008887;gbkey=CDS;gene=garK;go_function=glycerate kinase activity|0008887||IEA;go_process=organic acid phosphorylation|0031388||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228971.1;locus_tag=LI478_RS03410;product=glycerate 2-kinase;protein_id=WP_023288016.1;transl_table=11 NZ_CP085478.1 RefSeq gene 685164 686054 . - . ID=gene-LI478_RS03415;Name=garR;gbkey=Gene;gene=garR;gene_biotype=protein_coding;locus_tag=LI478_RS03415 NZ_CP085478.1 Protein Homology CDS 685164 686054 . - 0 ID=cds-WP_004889634.1;Parent=gene-LI478_RS03415;Dbxref=Genbank:WP_004889634.1;Name=WP_004889634.1;Ontology_term=GO:0046487,GO:0008679;gbkey=CDS;gene=garR;go_function=2-hydroxy-3-oxopropionate reductase activity|0008679||IEA;go_process=glyoxylate metabolic process|0046487||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312030.2;locus_tag=LI478_RS03415;product=2-hydroxy-3-oxopropionate reductase;protein_id=WP_004889634.1;transl_table=11 NZ_CP085478.1 RefSeq gene 686081 686851 . - . ID=gene-LI478_RS03420;Name=garL;gbkey=Gene;gene=garL;gene_biotype=protein_coding;locus_tag=LI478_RS03420 NZ_CP085478.1 Protein Homology CDS 686081 686851 . - 0 ID=cds-WP_004144873.1;Parent=gene-LI478_RS03420;Dbxref=Genbank:WP_004144873.1;Name=WP_004144873.1;Ontology_term=GO:0019394,GO:0008672;gbkey=CDS;gene=garL;go_function=2-dehydro-3-deoxyglucarate aldolase activity|0008672||IEA;go_process=glucarate catabolic process|0019394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462162.1;locus_tag=LI478_RS03420;product=2-dehydro-3-deoxyglucarate aldolase;protein_id=WP_004144873.1;transl_table=11 NZ_CP085478.1 RefSeq gene 686878 688209 . - . ID=gene-LI478_RS03425;Name=LI478_RS03425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS03425 NZ_CP085478.1 Protein Homology CDS 686878 688209 . - 0 ID=cds-WP_004149911.1;Parent=gene-LI478_RS03425;Dbxref=Genbank:WP_004149911.1;Name=WP_004149911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228974.1;locus_tag=LI478_RS03425;product=MFS transporter;protein_id=WP_004149911.1;transl_table=11 NZ_CP085478.1 RefSeq gene 688602 690173 . + . ID=gene-LI478_RS03430;Name=garD;gbkey=Gene;gene=garD;gene_biotype=protein_coding;locus_tag=LI478_RS03430 NZ_CP085478.1 Protein Homology CDS 688602 690173 . + 0 ID=cds-WP_002917960.1;Parent=gene-LI478_RS03430;Dbxref=Genbank:WP_002917960.1;Name=WP_002917960.1;Ontology_term=GO:0046392,GO:0008867;gbkey=CDS;gene=garD;go_function=galactarate dehydratase activity|0008867||IEA;go_process=galactarate catabolic process|0046392||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228976.1;locus_tag=LI478_RS03430;product=galactarate dehydratase;protein_id=WP_002917960.1;transl_table=11 NZ_CP085478.1 RefSeq gene 690374 691237 . - . ID=gene-LI478_RS03435;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=LI478_RS03435 NZ_CP085478.1 Protein Homology CDS 690374 691237 . - 0 ID=cds-WP_004144878.1;Parent=gene-LI478_RS03435;Dbxref=Genbank:WP_004144878.1;Name=WP_004144878.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rsmI;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228991.1;locus_tag=LI478_RS03435;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=WP_004144878.1;transl_table=11 NZ_CP085478.1 RefSeq gene 691301 693409 . + . ID=gene-LI478_RS03440;Name=LI478_RS03440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS03440 NZ_CP085478.1 Protein Homology CDS 691301 693409 . + 0 ID=cds-WP_023288017.1;Parent=gene-LI478_RS03440;Dbxref=Genbank:WP_023288017.1;Name=WP_023288017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228992.1;locus_tag=LI478_RS03440;product=penicillin-binding protein activator;protein_id=WP_023288017.1;transl_table=11 NZ_CP085478.1 RefSeq gene 693367 693753 . + . ID=gene-LI478_RS03445;Name=LI478_RS03445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS03445 NZ_CP085478.1 Protein Homology CDS 693367 693753 . + 0 ID=cds-WP_002918206.1;Parent=gene-LI478_RS03445;Dbxref=Genbank:WP_002918206.1;Name=WP_002918206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228993.1;locus_tag=LI478_RS03445;product=YraN family protein;protein_id=WP_002918206.1;transl_table=11 NZ_CP085478.1 RefSeq gene 693779 694369 . + . ID=gene-LI478_RS03450;Name=diaA;gbkey=Gene;gene=diaA;gene_biotype=protein_coding;locus_tag=LI478_RS03450 NZ_CP085478.1 Protein Homology CDS 693779 694369 . + 0 ID=cds-WP_002918211.1;Parent=gene-LI478_RS03450;Dbxref=Genbank:WP_002918211.1;Name=WP_002918211.1;gbkey=CDS;gene=diaA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228994.1;locus_tag=LI478_RS03450;product=DnaA initiator-associating protein DiaA;protein_id=WP_002918211.1;transl_table=11 NZ_CP085478.1 RefSeq gene 694379 694954 . + . ID=gene-LI478_RS03455;Name=dolP;gbkey=Gene;gene=dolP;gene_biotype=protein_coding;locus_tag=LI478_RS03455 NZ_CP085478.1 Protein Homology CDS 694379 694954 . + 0 ID=cds-WP_002918214.1;Parent=gene-LI478_RS03455;Dbxref=Genbank:WP_002918214.1;Name=WP_002918214.1;Ontology_term=GO:0006970;gbkey=CDS;gene=dolP;go_process=response to osmotic stress|0006970||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228995.1;locus_tag=LI478_RS03455;product=division/outer membrane stress-associated lipid-binding lipoprotein;protein_id=WP_002918214.1;transl_table=11 NZ_CP085478.1 RefSeq gene 695076 696116 . - . ID=gene-LI478_RS03460;Name=LI478_RS03460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS03460 NZ_CP085478.1 Protein Homology CDS 695076 696116 . - 0 ID=cds-WP_004889624.1;Parent=gene-LI478_RS03460;Dbxref=Genbank:WP_004889624.1;Name=WP_004889624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228996.1;locus_tag=LI478_RS03460;product=permease;protein_id=WP_004889624.1;transl_table=11 NZ_CP085478.1 RefSeq gene 696192 696839 . - . ID=gene-LI478_RS03465;Name=LI478_RS03465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS03465 NZ_CP085478.1 Protein Homology CDS 696192 696839 . - 0 ID=cds-WP_227394173.1;Parent=gene-LI478_RS03465;Dbxref=Genbank:WP_227394173.1;Name=WP_227394173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228997.1;locus_tag=LI478_RS03465;product=NAD(P)H-binding protein;protein_id=WP_227394173.1;transl_table=11 NZ_CP085478.1 RefSeq gene 696968 697504 . + . ID=gene-LI478_RS03470;Name=LI478_RS03470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS03470 NZ_CP085478.1 Protein Homology CDS 696968 697504 . + 0 ID=cds-WP_002918221.1;Parent=gene-LI478_RS03470;Dbxref=Genbank:WP_002918221.1;Name=WP_002918221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228998.1;locus_tag=LI478_RS03470;product=type 1 glutamine amidotransferase;protein_id=WP_002918221.1;transl_table=11 NZ_CP085478.1 RefSeq gene 697466 697909 . - . ID=gene-LI478_RS03475;Name=LI478_RS03475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS03475 NZ_CP085478.1 Protein Homology CDS 697466 697909 . - 0 ID=cds-WP_004889620.1;Parent=gene-LI478_RS03475;Dbxref=Genbank:WP_004889620.1;Name=WP_004889620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228999.1;locus_tag=LI478_RS03475;product=YhbP family protein;protein_id=WP_004889620.1;transl_table=11 NZ_CP085478.1 RefSeq gene 697959 698249 . + . ID=gene-LI478_RS03480;Name=LI478_RS03480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS03480 NZ_CP085478.1 Protein Homology CDS 697959 698249 . + 0 ID=cds-WP_002918226.1;Parent=gene-LI478_RS03480;Dbxref=Genbank:WP_002918226.1;Name=WP_002918226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229000.1;locus_tag=LI478_RS03480;product=GIY-YIG nuclease family protein;protein_id=WP_002918226.1;transl_table=11 NZ_CP085478.1 RefSeq gene 698236 698739 . - . ID=gene-LI478_RS03485;Name=LI478_RS03485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS03485 NZ_CP085478.1 Protein Homology CDS 698236 698739 . - 0 ID=cds-WP_002918229.1;Parent=gene-LI478_RS03485;Dbxref=Genbank:WP_002918229.1;Name=WP_002918229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004144885.1;locus_tag=LI478_RS03485;product=N-acetyltransferase;protein_id=WP_002918229.1;transl_table=11 NZ_CP085478.1 RefSeq gene 698733 699257 . - . ID=gene-LI478_RS03490;Name=LI478_RS03490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS03490 NZ_CP085478.1 Protein Homology CDS 698733 699257 . - 0 ID=cds-WP_002918231.1;Parent=gene-LI478_RS03490;Dbxref=Genbank:WP_002918231.1;Name=WP_002918231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229002.1;locus_tag=LI478_RS03490;product=SCP2 domain-containing protein;protein_id=WP_002918231.1;transl_table=11 NZ_CP085478.1 RefSeq gene 699479 700474 . + . ID=gene-LI478_RS03495;Name=LI478_RS03495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS03495 NZ_CP085478.1 Protein Homology CDS 699479 700474 . + 0 ID=cds-WP_002918232.1;Parent=gene-LI478_RS03495;Dbxref=Genbank:WP_002918232.1;Name=WP_002918232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017457364.1;locus_tag=LI478_RS03495;product=U32 family peptidase;protein_id=WP_002918232.1;transl_table=11 NZ_CP085478.1 RefSeq gene 700480 701358 . + . ID=gene-LI478_RS03500;Name=LI478_RS03500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS03500 NZ_CP085478.1 Protein Homology CDS 700480 701358 . + 0 ID=cds-WP_023288019.1;Parent=gene-LI478_RS03500;Dbxref=Genbank:WP_023288019.1;Name=WP_023288019.1;Ontology_term=GO:0006744;gbkey=CDS;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229004.1;locus_tag=LI478_RS03500;product=U32 family peptidase;protein_id=WP_023288019.1;transl_table=11 NZ_CP085478.1 RefSeq gene 701502 702509 . + . ID=gene-LI478_RS03505;Name=LI478_RS03505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS03505 NZ_CP085478.1 Protein Homology CDS 701502 702509 . + 0 ID=cds-WP_004144889.1;Parent=gene-LI478_RS03505;Dbxref=Genbank:WP_004144889.1;Name=WP_004144889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229005.1;locus_tag=LI478_RS03505;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_004144889.1;transl_table=11 NZ_CP085478.1 RefSeq gene 702554 703798 . - . ID=gene-LI478_RS03510;Name=mtr;gbkey=Gene;gene=mtr;gene_biotype=protein_coding;locus_tag=LI478_RS03510 NZ_CP085478.1 Protein Homology CDS 702554 703798 . - 0 ID=cds-WP_023288020.1;Parent=gene-LI478_RS03510;Dbxref=Genbank:WP_023288020.1;Name=WP_023288020.1;Ontology_term=GO:0015801,GO:0015173,GO:0005886;gbkey=CDS;gene=mtr;go_component=plasma membrane|0005886||IEA;go_function=aromatic amino acid transmembrane transporter activity|0015173||IEA;go_process=aromatic amino acid transport|0015801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229006.1;locus_tag=LI478_RS03510;product=tryptophan permease;protein_id=WP_023288020.1;transl_table=11 NZ_CP085478.1 RefSeq gene 703943 705874 . - . ID=gene-LI478_RS03515;Name=deaD;gbkey=Gene;gene=deaD;gene_biotype=protein_coding;locus_tag=LI478_RS03515 NZ_CP085478.1 Protein Homology CDS 703943 705874 . - 0 ID=cds-WP_004150943.1;Parent=gene-LI478_RS03515;Dbxref=Genbank:WP_004150943.1;Name=WP_004150943.1;gbkey=CDS;gene=deaD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229007.1;locus_tag=LI478_RS03515;product=ATP-dependent RNA helicase DeaD;protein_id=WP_004150943.1;transl_table=11 NZ_CP085478.1 RefSeq gene 705867 705947 . - . ID=gene-LI478_RS03520;Name=yrbN;gbkey=Gene;gene=yrbN;gene_biotype=protein_coding;locus_tag=LI478_RS03520 NZ_CP085478.1 Protein Homology CDS 705867 705947 . - 0 ID=cds-WP_085903200.1;Parent=gene-LI478_RS03520;Dbxref=Genbank:WP_085903200.1;Name=WP_085903200.1;gbkey=CDS;gene=yrbN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791258.1;locus_tag=LI478_RS03520;product=protein YrbN;protein_id=WP_085903200.1;transl_table=11 NZ_CP085478.1 RefSeq gene 706052 706936 . - . ID=gene-LI478_RS03525;Name=nlpI;gbkey=Gene;gene=nlpI;gene_biotype=protein_coding;locus_tag=LI478_RS03525 NZ_CP085478.1 Protein Homology CDS 706052 706936 . - 0 ID=cds-WP_002918241.1;Parent=gene-LI478_RS03525;Dbxref=Genbank:WP_002918241.1;Name=WP_002918241.1;Ontology_term=GO:0005515;gbkey=CDS;gene=nlpI;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020802045.1;locus_tag=LI478_RS03525;product=lipoprotein NlpI;protein_id=WP_002918241.1;transl_table=11 NZ_CP085478.1 RefSeq gene 707045 709180 . - . ID=gene-LI478_RS03530;Name=pnp;gbkey=Gene;gene=pnp;gene_biotype=protein_coding;locus_tag=LI478_RS03530 NZ_CP085478.1 Protein Homology CDS 707045 709180 . - 0 ID=cds-WP_004150944.1;Parent=gene-LI478_RS03530;Dbxref=Genbank:WP_004150944.1;Name=WP_004150944.1;Ontology_term=GO:0006402,GO:0004654;gbkey=CDS;gene=pnp;go_function=polyribonucleotide nucleotidyltransferase activity|0004654||IEA;go_process=mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229009.1;locus_tag=LI478_RS03530;product=polyribonucleotide nucleotidyltransferase;protein_id=WP_004150944.1;transl_table=11 NZ_CP085478.1 RefSeq gene 709423 709692 . - . ID=gene-LI478_RS03535;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=LI478_RS03535 NZ_CP085478.1 Protein Homology CDS 709423 709692 . - 0 ID=cds-WP_002918244.1;Parent=gene-LI478_RS03535;Dbxref=Genbank:WP_002918244.1;Name=WP_002918244.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsO;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933502.1;locus_tag=LI478_RS03535;product=30S ribosomal protein S15;protein_id=WP_002918244.1;transl_table=11 NZ_CP085478.1 RefSeq gene 709841 710785 . - . ID=gene-LI478_RS03540;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=LI478_RS03540 NZ_CP085478.1 Protein Homology CDS 709841 710785 . - 0 ID=cds-WP_004144892.1;Parent=gene-LI478_RS03540;Dbxref=Genbank:WP_004144892.1;Name=WP_004144892.1;Ontology_term=GO:0006400,GO:0004730;gbkey=CDS;gene=truB;go_function=pseudouridylate synthase activity|0004730||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229012.1;locus_tag=LI478_RS03540;product=tRNA pseudouridine(55) synthase TruB;protein_id=WP_004144892.1;transl_table=11 NZ_CP085478.1 RefSeq gene 710785 711186 . - . ID=gene-LI478_RS03545;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=LI478_RS03545 NZ_CP085478.1 Protein Homology CDS 710785 711186 . - 0 ID=cds-WP_002918248.1;Parent=gene-LI478_RS03545;Dbxref=Genbank:WP_002918248.1;Name=WP_002918248.1;Ontology_term=GO:0006396,GO:0019843;gbkey=CDS;gene=rbfA;go_function=rRNA binding|0019843||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001712908.1;locus_tag=LI478_RS03545;product=30S ribosome-binding factor RbfA;protein_id=WP_002918248.1;transl_table=11 NZ_CP085478.1 RefSeq gene 711289 713979 . - . ID=gene-LI478_RS03550;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=LI478_RS03550 NZ_CP085478.1 Protein Homology CDS 711289 713979 . - 0 ID=cds-WP_002918250.1;Parent=gene-LI478_RS03550;Dbxref=Genbank:WP_002918250.1;Name=WP_002918250.1;Ontology_term=GO:0006413,GO:0003743,GO:0005737;gbkey=CDS;gene=infB;go_component=cytoplasm|0005737||IEA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229014.1;locus_tag=LI478_RS03550;product=translation initiation factor IF-2;protein_id=WP_002918250.1;transl_table=11 NZ_CP085478.1 RefSeq gene 714004 715491 . - . ID=gene-LI478_RS03555;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=LI478_RS03555 NZ_CP085478.1 Protein Homology CDS 714004 715491 . - 0 ID=cds-WP_002918252.1;Parent=gene-LI478_RS03555;Dbxref=Genbank:WP_002918252.1;Name=WP_002918252.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005131833.1;locus_tag=LI478_RS03555;product=transcription termination factor NusA;protein_id=WP_002918252.1;transl_table=11 NZ_CP085478.1 RefSeq gene 715519 715971 . - . ID=gene-LI478_RS03560;Name=rimP;gbkey=Gene;gene=rimP;gene_biotype=protein_coding;locus_tag=LI478_RS03560 NZ_CP085478.1 Protein Homology CDS 715519 715971 . - 0 ID=cds-WP_002918364.1;Parent=gene-LI478_RS03560;Dbxref=Genbank:WP_002918364.1;Name=WP_002918364.1;Ontology_term=GO:0042274;gbkey=CDS;gene=rimP;go_process=ribosomal small subunit biogenesis|0042274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004125659.1;locus_tag=LI478_RS03560;product=ribosome maturation factor RimP;protein_id=WP_002918364.1;transl_table=11 NZ_CP085478.1 RefSeq gene 716180 716256 . - . ID=gene-LI478_RS03565;Name=LI478_RS03565;gbkey=Gene;gene_biotype=tRNA;locus_tag=LI478_RS03565 NZ_CP085478.1 tRNAscan-SE tRNA 716180 716256 . - . ID=rna-LI478_RS03565;Parent=gene-LI478_RS03565;anticodon=(pos:complement(716220..716222));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS03565;product=tRNA-Met NZ_CP085478.1 tRNAscan-SE exon 716180 716256 . - . ID=exon-LI478_RS03565-1;Parent=rna-LI478_RS03565;anticodon=(pos:complement(716220..716222));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS03565;product=tRNA-Met NZ_CP085478.1 RefSeq gene 716564 717907 . + . ID=gene-LI478_RS03570;Name=argG;gbkey=Gene;gene=argG;gene_biotype=protein_coding;locus_tag=LI478_RS03570 NZ_CP085478.1 Protein Homology CDS 716564 717907 . + 0 ID=cds-WP_004144895.1;Parent=gene-LI478_RS03570;Dbxref=Genbank:WP_004144895.1;Name=WP_004144895.1;Ontology_term=GO:0006526,GO:0004055,GO:0005524,GO:0042803;gbkey=CDS;gene=argG;go_function=argininosuccinate synthase activity|0004055||IEA,ATP binding|0005524||IEA,protein homodimerization activity|0042803||IEA;go_process=arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229019.1;locus_tag=LI478_RS03570;product=argininosuccinate synthase;protein_id=WP_004144895.1;transl_table=11 NZ_CP085478.1 RefSeq gene 718077 718706 . + . ID=gene-LI478_RS03575;Name=LI478_RS03575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS03575 NZ_CP085478.1 Protein Homology CDS 718077 718706 . + 0 ID=cds-WP_004185827.1;Parent=gene-LI478_RS03575;Dbxref=Genbank:WP_004185827.1;Name=WP_004185827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229020.1;locus_tag=LI478_RS03575;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_004185827.1;transl_table=11 NZ_CP085478.1 RefSeq gene 719048 719599 . + . ID=gene-LI478_RS03580;Name=LI478_RS03580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS03580 NZ_CP085478.1 Protein Homology CDS 719048 719599 . + 0 ID=cds-WP_032415624.1;Parent=gene-LI478_RS03580;Dbxref=Genbank:WP_032415624.1;Name=WP_032415624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004181413.1;locus_tag=LI478_RS03580;product=YfaZ family outer membrane protein;protein_id=WP_032415624.1;transl_table=11 NZ_CP085478.1 RefSeq gene 719641 719889 . - . ID=gene-LI478_RS03585;Name=LI478_RS03585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS03585 NZ_CP085478.1 Protein Homology CDS 719641 719889 . - 0 ID=cds-WP_014906872.1;Parent=gene-LI478_RS03585;Dbxref=Genbank:WP_014906872.1;Name=WP_014906872.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229023.1;locus_tag=LI478_RS03585;product=hypothetical protein;protein_id=WP_014906872.1;transl_table=11 NZ_CP085478.1 RefSeq gene 720187 720273 . - . ID=gene-LI478_RS03590;Name=LI478_RS03590;gbkey=Gene;gene_biotype=tRNA;locus_tag=LI478_RS03590 NZ_CP085478.1 tRNAscan-SE tRNA 720187 720273 . - . ID=rna-LI478_RS03590;Parent=gene-LI478_RS03590;anticodon=(pos:complement(720237..720239));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS03590;product=tRNA-Leu NZ_CP085478.1 tRNAscan-SE exon 720187 720273 . - . ID=exon-LI478_RS03590-1;Parent=rna-LI478_RS03590;anticodon=(pos:complement(720237..720239));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS03590;product=tRNA-Leu NZ_CP085478.1 RefSeq gene 720283 720612 . - . ID=gene-LI478_RS03595;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=LI478_RS03595 NZ_CP085478.1 Protein Homology CDS 720283 720612 . - 0 ID=cds-WP_002918369.1;Parent=gene-LI478_RS03595;Dbxref=Genbank:WP_002918369.1;Name=WP_002918369.1;Ontology_term=GO:0043952,GO:0015450,GO:0005886;gbkey=CDS;gene=secG;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229024.1;locus_tag=LI478_RS03595;product=preprotein translocase subunit SecG;protein_id=WP_002918369.1;transl_table=11 NZ_CP085478.1 RefSeq gene 720842 722179 . - . ID=gene-LI478_RS03600;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=LI478_RS03600 NZ_CP085478.1 Protein Homology CDS 720842 722179 . - 0 ID=cds-WP_002918370.1;Parent=gene-LI478_RS03600;Dbxref=Genbank:WP_002918370.1;Name=WP_002918370.1;Ontology_term=GO:0005975,GO:0000287,GO:0008966,GO:0016868;gbkey=CDS;gene=glmM;go_function=magnesium ion binding|0000287||IEA,phosphoglucosamine mutase activity|0008966||IEA,intramolecular transferase activity%2C phosphotransferases|0016868||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229025.1;locus_tag=LI478_RS03600;product=phosphoglucosamine mutase;protein_id=WP_002918370.1;transl_table=11 NZ_CP085478.1 RefSeq gene 722172 723020 . - . ID=gene-LI478_RS03605;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=LI478_RS03605 NZ_CP085478.1 Protein Homology CDS 722172 723020 . - 0 ID=cds-WP_002918371.1;Parent=gene-LI478_RS03605;Dbxref=Genbank:WP_002918371.1;Name=WP_002918371.1;Ontology_term=GO:0004156;gbkey=CDS;gene=folP;go_function=dihydropteroate synthase activity|0004156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229026.1;locus_tag=LI478_RS03605;product=dihydropteroate synthase;protein_id=WP_002918371.1;transl_table=11 NZ_CP085478.1 RefSeq gene 723114 725048 . - . ID=gene-LI478_RS03610;Name=ftsH;gbkey=Gene;gene=ftsH;gene_biotype=protein_coding;locus_tag=LI478_RS03610 NZ_CP085478.1 Protein Homology CDS 723114 725048 . - 0 ID=cds-WP_002918372.1;Parent=gene-LI478_RS03610;Dbxref=Genbank:WP_002918372.1;Name=WP_002918372.1;Ontology_term=GO:0006508,GO:0004176,GO:0004222;gbkey=CDS;gene=ftsH;go_function=ATP-dependent peptidase activity|0004176||IEA,metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014833437.1;locus_tag=LI478_RS03610;product=ATP-dependent zinc metalloprotease FtsH;protein_id=WP_002918372.1;transl_table=11 NZ_CP085478.1 RefSeq gene 725148 725777 . - . ID=gene-LI478_RS03615;Name=rlmE;gbkey=Gene;gene=rlmE;gene_biotype=protein_coding;locus_tag=LI478_RS03615 NZ_CP085478.1 Protein Homology CDS 725148 725777 . - 0 ID=cds-WP_002918373.1;Parent=gene-LI478_RS03615;Dbxref=Genbank:WP_002918373.1;Name=WP_002918373.1;Ontology_term=GO:0001510,GO:0006364,GO:0016436;gbkey=CDS;gene=rlmE;go_function=rRNA (uridine) methyltransferase activity|0016436||IEA;go_process=RNA methylation|0001510||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229028.1;locus_tag=LI478_RS03615;product=23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE;protein_id=WP_002918373.1;transl_table=11 NZ_CP085478.1 RefSeq gene 725901 726194 . + . ID=gene-LI478_RS03620;Name=yhbY;gbkey=Gene;gene=yhbY;gene_biotype=protein_coding;locus_tag=LI478_RS03620 NZ_CP085478.1 Protein Homology CDS 725901 726194 . + 0 ID=cds-WP_002918374.1;Parent=gene-LI478_RS03620;Dbxref=Genbank:WP_002918374.1;Name=WP_002918374.1;gbkey=CDS;gene=yhbY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014833438.1;locus_tag=LI478_RS03620;product=ribosome assembly RNA-binding protein YhbY;protein_id=WP_002918374.1;transl_table=11 NZ_CP085478.1 RefSeq gene 726347 726823 . - . ID=gene-LI478_RS03625;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=LI478_RS03625 NZ_CP085478.1 Protein Homology CDS 726347 726823 . - 0 ID=cds-WP_002918375.1;Parent=gene-LI478_RS03625;Dbxref=Genbank:WP_002918375.1;Name=WP_002918375.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=greA;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006178768.1;locus_tag=LI478_RS03625;product=transcription elongation factor GreA;protein_id=WP_002918375.1;transl_table=11 NZ_CP085478.1 RefSeq gene 727059 728492 . + . ID=gene-LI478_RS03630;Name=dacB;gbkey=Gene;gene=dacB;gene_biotype=protein_coding;locus_tag=LI478_RS03630 NZ_CP085478.1 Protein Homology CDS 727059 728492 . + 0 ID=cds-WP_004149937.1;Parent=gene-LI478_RS03630;Dbxref=Genbank:WP_004149937.1;Name=WP_004149937.1;Ontology_term=GO:0006508,GO:0004185;gbkey=CDS;gene=dacB;go_function=serine-type carboxypeptidase activity|0004185||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001212660.1;locus_tag=LI478_RS03630;product=serine-type D-Ala-D-Ala carboxypeptidase;protein_id=WP_004149937.1;transl_table=11 NZ_CP085478.1 RefSeq gene 728544 729722 . - . ID=gene-LI478_RS03635;Name=cgtA;gbkey=Gene;gene=cgtA;gene_biotype=protein_coding;locus_tag=LI478_RS03635 NZ_CP085478.1 Protein Homology CDS 728544 729722 . - 0 ID=cds-WP_032415626.1;Parent=gene-LI478_RS03635;Dbxref=Genbank:WP_032415626.1;Name=WP_032415626.1;Ontology_term=GO:0042254,GO:0005525;gbkey=CDS;gene=cgtA;go_function=GTP binding|0005525||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229032.1;locus_tag=LI478_RS03635;product=Obg family GTPase CgtA;protein_id=WP_032415626.1;transl_table=11 NZ_CP085478.1 RefSeq gene 729738 730703 . - . ID=gene-LI478_RS03640;Name=LI478_RS03640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS03640 NZ_CP085478.1 Protein Homology CDS 729738 730703 . - 0 ID=cds-WP_004149938.1;Parent=gene-LI478_RS03640;Dbxref=Genbank:WP_004149938.1;Name=WP_004149938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012135318.1;locus_tag=LI478_RS03640;product=DMT family transporter;protein_id=WP_004149938.1;transl_table=11 NZ_CP085478.1 RefSeq gene 730797 731054 . - . ID=gene-LI478_RS03645;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=LI478_RS03645 NZ_CP085478.1 Protein Homology CDS 730797 731054 . - 0 ID=cds-WP_002434222.1;Parent=gene-LI478_RS03645;Dbxref=Genbank:WP_002434222.1;Name=WP_002434222.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmA;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933559.1;locus_tag=LI478_RS03645;product=50S ribosomal protein L27;protein_id=WP_002434222.1;transl_table=11 NZ_CP085478.1 RefSeq gene 731075 731386 . - . ID=gene-LI478_RS03650;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=LI478_RS03650 NZ_CP085478.1 Protein Homology CDS 731075 731386 . - 0 ID=cds-WP_002918379.1;Parent=gene-LI478_RS03650;Dbxref=Genbank:WP_002918379.1;Name=WP_002918379.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplU;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015960603.1;locus_tag=LI478_RS03650;product=50S ribosomal protein L21;protein_id=WP_002918379.1;transl_table=11 NZ_CP085478.1 RefSeq gene 731647 732618 . + . ID=gene-LI478_RS03655;Name=ispB;gbkey=Gene;gene=ispB;gene_biotype=protein_coding;locus_tag=LI478_RS03655 NZ_CP085478.1 Protein Homology CDS 731647 732618 . + 0 ID=cds-WP_004144907.1;Parent=gene-LI478_RS03655;Dbxref=Genbank:WP_004144907.1;Name=WP_004144907.1;Ontology_term=GO:0008299;gbkey=CDS;gene=ispB;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229036.1;locus_tag=LI478_RS03655;product=octaprenyl diphosphate synthase;protein_id=WP_004144907.1;transl_table=11 NZ_CP085478.1 RefSeq gene 732816 733088 . + . ID=gene-LI478_RS03660;Name=sfsB;gbkey=Gene;gene=sfsB;gene_biotype=protein_coding;locus_tag=LI478_RS03660 NZ_CP085478.1 Protein Homology CDS 732816 733088 . + 0 ID=cds-WP_002918381.1;Parent=gene-LI478_RS03660;Dbxref=Genbank:WP_002918381.1;Name=WP_002918381.1;gbkey=CDS;gene=sfsB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229037.1;locus_tag=LI478_RS03660;product=DNA-binding transcriptional regulator SfsB;protein_id=WP_002918381.1;transl_table=11 NZ_CP085478.1 RefSeq gene 733144 734403 . - . ID=gene-LI478_RS03665;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;locus_tag=LI478_RS03665 NZ_CP085478.1 Protein Homology CDS 733144 734403 . - 0 ID=cds-WP_002918382.1;Parent=gene-LI478_RS03665;Dbxref=Genbank:WP_002918382.1;Name=WP_002918382.1;Ontology_term=GO:0009252,GO:0008760;gbkey=CDS;gene=murA;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004868122.1;locus_tag=LI478_RS03665;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=WP_002918382.1;transl_table=11 NZ_CP085478.1 RefSeq gene 734457 734711 . - . ID=gene-LI478_RS03670;Name=ibaG;gbkey=Gene;gene=ibaG;gene_biotype=protein_coding;locus_tag=LI478_RS03670 NZ_CP085478.1 Protein Homology CDS 734457 734711 . - 0 ID=cds-WP_004144910.1;Parent=gene-LI478_RS03670;Dbxref=Genbank:WP_004144910.1;Name=WP_004144910.1;gbkey=CDS;gene=ibaG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229039.1;locus_tag=LI478_RS03670;product=BolA family iron metabolism protein IbaG;protein_id=WP_004144910.1;transl_table=11 NZ_CP085478.1 RefSeq gene 734851 735138 . - . ID=gene-LI478_RS03675;Name=mlaB;gbkey=Gene;gene=mlaB;gene_biotype=protein_coding;locus_tag=LI478_RS03675 NZ_CP085478.1 Protein Homology CDS 734851 735138 . - 0 ID=cds-WP_004185850.1;Parent=gene-LI478_RS03675;Dbxref=Genbank:WP_004185850.1;Name=WP_004185850.1;gbkey=CDS;gene=mlaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004185850.1;locus_tag=LI478_RS03675;product=lipid asymmetry maintenance protein MlaB;protein_id=WP_004185850.1;transl_table=11 NZ_CP085478.1 RefSeq gene 735138 735773 . - . ID=gene-LI478_RS03680;Name=mlaC;gbkey=Gene;gene=mlaC;gene_biotype=protein_coding;locus_tag=LI478_RS03680 NZ_CP085478.1 Protein Homology CDS 735138 735773 . - 0 ID=cds-WP_002918386.1;Parent=gene-LI478_RS03680;Dbxref=Genbank:WP_002918386.1;Name=WP_002918386.1;gbkey=CDS;gene=mlaC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229041.1;locus_tag=LI478_RS03680;product=phospholipid-binding protein MlaC;protein_id=WP_002918386.1;transl_table=11 NZ_CP085478.1 RefSeq gene 735792 736343 . - . ID=gene-LI478_RS03685;Name=mlaD;gbkey=Gene;gene=mlaD;gene_biotype=protein_coding;locus_tag=LI478_RS03685 NZ_CP085478.1 Protein Homology CDS 735792 736343 . - 0 ID=cds-WP_002918387.1;Parent=gene-LI478_RS03685;Dbxref=Genbank:WP_002918387.1;Name=WP_002918387.1;Ontology_term=GO:0015914;gbkey=CDS;gene=mlaD;go_process=phospholipid transport|0015914||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229042.1;locus_tag=LI478_RS03685;product=outer membrane lipid asymmetry maintenance protein MlaD;protein_id=WP_002918387.1;transl_table=11 NZ_CP085478.1 RefSeq gene 736348 737130 . - . ID=gene-LI478_RS03690;Name=mlaE;gbkey=Gene;gene=mlaE;gene_biotype=protein_coding;locus_tag=LI478_RS03690 NZ_CP085478.1 Protein Homology CDS 736348 737130 . - 0 ID=cds-WP_004150949.1;Parent=gene-LI478_RS03690;Dbxref=Genbank:WP_004150949.1;Name=WP_004150949.1;Ontology_term=GO:0043190;gbkey=CDS;gene=mlaE;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014071945.1;locus_tag=LI478_RS03690;product=lipid asymmetry maintenance ABC transporter permease subunit MlaE;protein_id=WP_004150949.1;transl_table=11 NZ_CP085478.1 RefSeq gene 737138 737950 . - . ID=gene-LI478_RS03695;Name=mlaF;gbkey=Gene;gene=mlaF;gene_biotype=protein_coding;locus_tag=LI478_RS03695 NZ_CP085478.1 Protein Homology CDS 737138 737950 . - 0 ID=cds-WP_004150950.1;Parent=gene-LI478_RS03695;Dbxref=Genbank:WP_004150950.1;Name=WP_004150950.1;Ontology_term=GO:0005524;gbkey=CDS;gene=mlaF;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020883529.1;locus_tag=LI478_RS03695;product=phospholipid ABC transporter ATP-binding protein MlaF;protein_id=WP_004150950.1;transl_table=11 NZ_CP085478.1 RefSeq gene 738160 739137 . + . ID=gene-LI478_RS03700;Name=LI478_RS03700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS03700 NZ_CP085478.1 Protein Homology CDS 738160 739137 . + 0 ID=cds-WP_002918397.1;Parent=gene-LI478_RS03700;Dbxref=Genbank:WP_002918397.1;Name=WP_002918397.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229045.1;locus_tag=LI478_RS03700;product=calcium/sodium antiporter;protein_id=WP_002918397.1;transl_table=11 NZ_CP085478.1 RefSeq gene 739152 740138 . + . ID=gene-LI478_RS03705;Name=kdsD;gbkey=Gene;gene=kdsD;gene_biotype=protein_coding;locus_tag=LI478_RS03705 NZ_CP085478.1 Protein Homology CDS 739152 740138 . + 0 ID=cds-WP_002918399.1;Parent=gene-LI478_RS03705;Dbxref=Genbank:WP_002918399.1;Name=WP_002918399.1;Ontology_term=GO:1901135,GO:0016853,GO:0097367;gbkey=CDS;gene=kdsD;go_function=isomerase activity|0016853||IEA,carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417664.1;locus_tag=LI478_RS03705;product=arabinose-5-phosphate isomerase KdsD;protein_id=WP_002918399.1;transl_table=11 NZ_CP085478.1 RefSeq gene 740153 740719 . + . ID=gene-LI478_RS03710;Name=kdsC;gbkey=Gene;gene=kdsC;gene_biotype=protein_coding;locus_tag=LI478_RS03710 NZ_CP085478.1 Protein Homology CDS 740153 740719 . + 0 ID=cds-WP_002918405.1;Parent=gene-LI478_RS03710;Dbxref=Genbank:WP_002918405.1;Name=WP_002918405.1;Ontology_term=GO:0016788;gbkey=CDS;gene=kdsC;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229047.1;locus_tag=LI478_RS03710;product=3-deoxy-manno-octulosonate-8-phosphatase KdsC;protein_id=WP_002918405.1;transl_table=11 NZ_CP085478.1 RefSeq gene 740716 741291 . + . ID=gene-LI478_RS03715;Name=lptC;gbkey=Gene;gene=lptC;gene_biotype=protein_coding;locus_tag=LI478_RS03715 NZ_CP085478.1 Protein Homology CDS 740716 741291 . + 0 ID=cds-WP_002918413.1;Parent=gene-LI478_RS03715;Dbxref=Genbank:WP_002918413.1;Name=WP_002918413.1;gbkey=CDS;gene=lptC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229048.1;locus_tag=LI478_RS03715;product=LPS export ABC transporter periplasmic protein LptC;protein_id=WP_002918413.1;transl_table=11 NZ_CP085478.1 RefSeq gene 741260 741805 . + . ID=gene-LI478_RS03720;Name=lptA;gbkey=Gene;gene=lptA;gene_biotype=protein_coding;locus_tag=LI478_RS03720 NZ_CP085478.1 Protein Homology CDS 741260 741805 . + 0 ID=cds-WP_002918415.1;Parent=gene-LI478_RS03720;Dbxref=Genbank:WP_002918415.1;Name=WP_002918415.1;gbkey=CDS;gene=lptA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229049.1;locus_tag=LI478_RS03720;product=lipopolysaccharide ABC transporter substrate-binding protein LptA;protein_id=WP_002918415.1;transl_table=11 NZ_CP085478.1 RefSeq gene 741812 742537 . + . ID=gene-LI478_RS03725;Name=lptB;gbkey=Gene;gene=lptB;gene_biotype=protein_coding;locus_tag=LI478_RS03725 NZ_CP085478.1 Protein Homology CDS 741812 742537 . + 0 ID=cds-WP_002918417.1;Parent=gene-LI478_RS03725;Dbxref=Genbank:WP_002918417.1;Name=WP_002918417.1;Ontology_term=GO:0055085,GO:0005524,GO:0043190;gbkey=CDS;gene=lptB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861862.1;locus_tag=LI478_RS03725;product=LPS export ABC transporter ATP-binding protein;protein_id=WP_002918417.1;transl_table=11 NZ_CP085478.1 RefSeq gene 742585 744018 . + . ID=gene-LI478_RS03730;Name=rpoN;gbkey=Gene;gene=rpoN;gene_biotype=protein_coding;locus_tag=LI478_RS03730 NZ_CP085478.1 Protein Homology CDS 742585 744018 . + 0 ID=cds-WP_002918420.1;Parent=gene-LI478_RS03730;Dbxref=Genbank:WP_002918420.1;Name=WP_002918420.1;Ontology_term=GO:0006352,GO:0001216,GO:0003677,GO:0016987;gbkey=CDS;gene=rpoN;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229051.1;locus_tag=LI478_RS03730;product=RNA polymerase factor sigma-54;protein_id=WP_002918420.1;transl_table=11 NZ_CP085478.1 RefSeq gene 744041 744328 . + . ID=gene-LI478_RS03735;Name=hpf;gbkey=Gene;gene=hpf;gene_biotype=protein_coding;locus_tag=LI478_RS03735 NZ_CP085478.1 Protein Homology CDS 744041 744328 . + 0 ID=cds-WP_002918423.1;Parent=gene-LI478_RS03735;Dbxref=Genbank:WP_002918423.1;Name=WP_002918423.1;Ontology_term=GO:0044238;gbkey=CDS;gene=hpf;go_process=primary metabolic process|0044238||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229052.1;locus_tag=LI478_RS03735;product=ribosome hibernation promoting factor;protein_id=WP_002918423.1;transl_table=11 NZ_CP085478.1 RefSeq gene 744399 744887 . + . ID=gene-LI478_RS03740;Name=ptsN;gbkey=Gene;gene=ptsN;gene_biotype=protein_coding;locus_tag=LI478_RS03740 NZ_CP085478.1 Protein Homology CDS 744399 744887 . + 0 ID=cds-WP_102007281.1;Parent=gene-LI478_RS03740;Dbxref=Genbank:WP_102007281.1;Name=WP_102007281.1;gbkey=CDS;gene=ptsN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229053.1;locus_tag=LI478_RS03740;product=PTS IIA-like nitrogen regulatory protein PtsN;protein_id=WP_102007281.1;transl_table=11 NZ_CP085478.1 RefSeq gene 744933 745787 . + . ID=gene-LI478_RS03745;Name=rapZ;gbkey=Gene;gene=rapZ;gene_biotype=protein_coding;locus_tag=LI478_RS03745 NZ_CP085478.1 Protein Homology CDS 744933 745787 . + 0 ID=cds-WP_002918428.1;Parent=gene-LI478_RS03745;Dbxref=Genbank:WP_002918428.1;Name=WP_002918428.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rapZ;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229054.1;locus_tag=LI478_RS03745;product=RNase adapter RapZ;protein_id=WP_002918428.1;transl_table=11 NZ_CP085478.1 RefSeq gene 745784 746056 . + . ID=gene-LI478_RS03750;Name=npr;gbkey=Gene;gene=npr;gene_biotype=protein_coding;locus_tag=LI478_RS03750 NZ_CP085478.1 Protein Homology CDS 745784 746056 . + 0 ID=cds-WP_002918431.1;Parent=gene-LI478_RS03750;Dbxref=Genbank:WP_002918431.1;Name=WP_002918431.1;gbkey=CDS;gene=npr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000216792.1;locus_tag=LI478_RS03750;product=PTS phosphocarrier protein NPr;protein_id=WP_002918431.1;transl_table=11 NZ_CP085478.1 RefSeq gene 746120 746845 . - . ID=gene-LI478_RS03755;Name=mtgA;gbkey=Gene;gene=mtgA;gene_biotype=protein_coding;locus_tag=LI478_RS03755 NZ_CP085478.1 Protein Homology CDS 746120 746845 . - 0 ID=cds-WP_032439011.1;Parent=gene-LI478_RS03755;Dbxref=Genbank:WP_032439011.1;Name=WP_032439011.1;Ontology_term=GO:0009252,GO:0009274,GO:0016020;gbkey=CDS;gene=mtgA;go_component=peptidoglycan-based cell wall|0009274||IEA,membrane|0016020||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229056.1;locus_tag=LI478_RS03755;product=monofunctional biosynthetic peptidoglycan transglycosylase;protein_id=WP_032439011.1;transl_table=11 NZ_CP085478.1 RefSeq gene 746842 747495 . - . ID=gene-LI478_RS03760;Name=elbB;gbkey=Gene;gene=elbB;gene_biotype=protein_coding;locus_tag=LI478_RS03760 NZ_CP085478.1 Protein Homology CDS 746842 747495 . - 0 ID=cds-WP_004185856.1;Parent=gene-LI478_RS03760;Dbxref=Genbank:WP_004185856.1;Name=WP_004185856.1;gbkey=CDS;gene=elbB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229057.1;locus_tag=LI478_RS03760;product=isoprenoid biosynthesis glyoxalase ElbB;protein_id=WP_004185856.1;transl_table=11 NZ_CP085478.1 RefSeq gene 747729 750068 . - . ID=gene-LI478_RS03765;Name=arcB;gbkey=Gene;gene=arcB;gene_biotype=protein_coding;locus_tag=LI478_RS03765 NZ_CP085478.1 Protein Homology CDS 747729 750068 . - 0 ID=cds-WP_002918444.1;Parent=gene-LI478_RS03765;Dbxref=Genbank:WP_002918444.1;Name=WP_002918444.1;Ontology_term=GO:0000160,GO:0006355,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=arcB;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229058.1;locus_tag=LI478_RS03765;product=aerobic respiration two-component sensor histidine kinase ArcB;protein_id=WP_002918444.1;transl_table=11 NZ_CP085478.1 RefSeq gene 750215 751279 . - . ID=gene-LI478_RS03770;Name=uxuA;gbkey=Gene;gene=uxuA;gene_biotype=protein_coding;locus_tag=LI478_RS03770 NZ_CP085478.1 Protein Homology CDS 750215 751279 . - 0 ID=cds-WP_004174133.1;Parent=gene-LI478_RS03770;Dbxref=Genbank:WP_004174133.1;Name=WP_004174133.1;Ontology_term=GO:0006064,GO:0008927;gbkey=CDS;gene=uxuA;go_function=mannonate dehydratase activity|0008927||IEA;go_process=glucuronate catabolic process|0006064||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229059.1;locus_tag=LI478_RS03770;product=mannonate dehydratase;protein_id=WP_004174133.1;transl_table=11 NZ_CP085478.1 RefSeq gene 751576 752592 . + . ID=gene-LI478_RS03775;Name=LI478_RS03775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS03775 NZ_CP085478.1 Protein Homology CDS 751576 752592 . + 0 ID=cds-WP_002918451.1;Parent=gene-LI478_RS03775;Dbxref=Genbank:WP_002918451.1;Name=WP_002918451.1;Ontology_term=GO:0008270,GO:0016491;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229061.1;locus_tag=LI478_RS03775;product=Zn-dependent oxidoreductase;protein_id=WP_002918451.1;transl_table=11 NZ_CP085478.1 RefSeq gene 752678 753961 . + . ID=gene-LI478_RS03780;Name=LI478_RS03780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS03780 NZ_CP085478.1 Protein Homology CDS 752678 753961 . + 0 ID=cds-WP_002918453.1;Parent=gene-LI478_RS03780;Dbxref=Genbank:WP_002918453.1;Name=WP_002918453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229062.1;locus_tag=LI478_RS03780;product=MFS transporter;protein_id=WP_002918453.1;transl_table=11 NZ_CP085478.1 RefSeq gene 754013 754945 . - . ID=gene-LI478_RS03785;Name=LI478_RS03785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS03785 NZ_CP085478.1 Protein Homology CDS 754013 754945 . - 0 ID=cds-WP_002918455.1;Parent=gene-LI478_RS03785;Dbxref=Genbank:WP_002918455.1;Name=WP_002918455.1;Note=This family includes YhcC from E. coli K-12%2C an uncharacterized radical SAM protein.;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015959060.1;locus_tag=LI478_RS03785;product=TIGR01212 family radical SAM protein;protein_id=WP_002918455.1;transl_table=11 NZ_CP085478.1 RefSeq gene 755619 760079 . + . ID=gene-LI478_RS03790;Name=gltB;gbkey=Gene;gene=gltB;gene_biotype=protein_coding;locus_tag=LI478_RS03790 NZ_CP085478.1 Protein Homology CDS 755619 760079 . + 0 ID=cds-WP_002918458.1;Parent=gene-LI478_RS03790;Dbxref=Genbank:WP_002918458.1;Name=WP_002918458.1;Ontology_term=GO:0006537,GO:0006807,GO:0003824,GO:0015930,GO:0016491;gbkey=CDS;gene=gltB;go_function=catalytic activity|0003824||IEA,glutamate synthase activity|0015930||IEA,oxidoreductase activity|0016491||IEA;go_process=glutamate biosynthetic process|0006537||IEA,nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742510.1;locus_tag=LI478_RS03790;product=glutamate synthase large subunit;protein_id=WP_002918458.1;transl_table=11 NZ_CP085478.1 RefSeq gene 760089 761507 . + . ID=gene-LI478_RS03795;Name=LI478_RS03795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS03795 NZ_CP085478.1 Protein Homology CDS 760089 761507 . + 0 ID=cds-WP_002918461.1;Parent=gene-LI478_RS03795;Dbxref=Genbank:WP_002918461.1;Name=WP_002918461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001540975.1;locus_tag=LI478_RS03795;product=glutamate synthase small subunit;protein_id=WP_002918461.1;transl_table=11 NZ_CP085478.1 RefSeq gene 761562 762266 . - . ID=gene-LI478_RS03800;Name=LI478_RS03800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS03800 NZ_CP085478.1 Protein Homology CDS 761562 762266 . - 0 ID=cds-WP_004185859.1;Parent=gene-LI478_RS03800;Dbxref=Genbank:WP_004185859.1;Name=WP_004185859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229066.1;locus_tag=LI478_RS03800;product=N-acetylmannosamine-6-phosphate 2-epimerase;protein_id=WP_004185859.1;transl_table=11 NZ_CP085478.1 RefSeq gene 762391 762885 . - . ID=gene-LI478_RS03805;Name=sspB;gbkey=Gene;gene=sspB;gene_biotype=protein_coding;locus_tag=LI478_RS03805 NZ_CP085478.1 Protein Homology CDS 762391 762885 . - 0 ID=cds-WP_002918465.1;Parent=gene-LI478_RS03805;Dbxref=Genbank:WP_002918465.1;Name=WP_002918465.1;gbkey=CDS;gene=sspB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229067.1;locus_tag=LI478_RS03805;product=ClpXP protease specificity-enhancing factor;protein_id=WP_002918465.1;transl_table=11 NZ_CP085478.1 RefSeq gene 762889 763527 . - . ID=gene-LI478_RS03810;Name=sspA;gbkey=Gene;gene=sspA;gene_biotype=protein_coding;locus_tag=LI478_RS03810 NZ_CP085478.1 Protein Homology CDS 762889 763527 . - 0 ID=cds-WP_002918467.1;Parent=gene-LI478_RS03810;Dbxref=Genbank:WP_002918467.1;Name=WP_002918467.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=sspA;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000257299.1;locus_tag=LI478_RS03810;product=stringent starvation protein A;protein_id=WP_002918467.1;transl_table=11 NZ_CP085478.1 RefSeq gene 763497 763781 . - . ID=gene-LI478_RS03815;Name=LI478_RS03815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS03815 NZ_CP085478.1 GeneMarkS-2+ CDS 763497 763781 . - 0 ID=cds-WP_135801240.1;Parent=gene-LI478_RS03815;Dbxref=Genbank:WP_135801240.1;Name=WP_135801240.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LI478_RS03815;product=hypothetical protein;protein_id=WP_135801240.1;transl_table=11 NZ_CP085478.1 RefSeq gene 763839 764231 . - . ID=gene-LI478_RS03820;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=LI478_RS03820 NZ_CP085478.1 Protein Homology CDS 763839 764231 . - 0 ID=cds-WP_000829818.1;Parent=gene-LI478_RS03820;Dbxref=Genbank:WP_000829818.1;Name=WP_000829818.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000829824.1;locus_tag=LI478_RS03820;product=30S ribosomal protein S9;protein_id=WP_000829818.1;transl_table=11 NZ_CP085478.1 RefSeq gene 764247 764675 . - . ID=gene-LI478_RS03825;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=LI478_RS03825 NZ_CP085478.1 Protein Homology CDS 764247 764675 . - 0 ID=cds-WP_002918559.1;Parent=gene-LI478_RS03825;Dbxref=Genbank:WP_002918559.1;Name=WP_002918559.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplM;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847760.1;locus_tag=LI478_RS03825;product=50S ribosomal protein L13;protein_id=WP_002918559.1;transl_table=11 NZ_CP085478.1 RefSeq gene 764941 766068 . - . ID=gene-LI478_RS03830;Name=zapE;gbkey=Gene;gene=zapE;gene_biotype=protein_coding;locus_tag=LI478_RS03830 NZ_CP085478.1 Protein Homology CDS 764941 766068 . - 0 ID=cds-WP_004144945.1;Parent=gene-LI478_RS03830;Dbxref=Genbank:WP_004144945.1;Name=WP_004144945.1;Ontology_term=GO:0051301,GO:0005524,GO:0016887;gbkey=CDS;gene=zapE;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229071.1;locus_tag=LI478_RS03830;product=cell division protein ZapE;protein_id=WP_004144945.1;transl_table=11 NZ_CP085478.1 RefSeq gene 766259 766657 . + . ID=gene-LI478_RS03835;Name=zapG;gbkey=Gene;gene=zapG;gene_biotype=protein_coding;locus_tag=LI478_RS03835 NZ_CP085478.1 Protein Homology CDS 766259 766657 . + 0 ID=cds-WP_002918565.1;Parent=gene-LI478_RS03835;Dbxref=Genbank:WP_002918565.1;Name=WP_002918565.1;gbkey=CDS;gene=zapG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229072.1;locus_tag=LI478_RS03835;product=Z-ring associated protein ZapG;protein_id=WP_002918565.1;transl_table=11 NZ_CP085478.1 RefSeq gene 766831 768198 . + . ID=gene-LI478_RS03840;Name=degQ;gbkey=Gene;gene=degQ;gene_biotype=protein_coding;locus_tag=LI478_RS03840 NZ_CP085478.1 Protein Homology CDS 766831 768198 . + 0 ID=cds-WP_004174125.1;Parent=gene-LI478_RS03840;Dbxref=Genbank:WP_004174125.1;Name=WP_004174125.1;Ontology_term=GO:0006508,GO:0004252,GO:0005515;gbkey=CDS;gene=degQ;go_function=serine-type endopeptidase activity|0004252||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229073.1;locus_tag=LI478_RS03840;product=serine endoprotease DegQ;protein_id=WP_004174125.1;transl_table=11 NZ_CP085478.1 RefSeq gene 768286 769344 . + . ID=gene-LI478_RS03845;Name=degS;gbkey=Gene;gene=degS;gene_biotype=protein_coding;locus_tag=LI478_RS03845 NZ_CP085478.1 Protein Homology CDS 768286 769344 . + 0 ID=cds-WP_002918568.1;Parent=gene-LI478_RS03845;Dbxref=Genbank:WP_002918568.1;Name=WP_002918568.1;Ontology_term=GO:0006508,GO:0004252;gbkey=CDS;gene=degS;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229074.1;locus_tag=LI478_RS03845;product=outer membrane-stress sensor serine endopeptidase DegS;protein_id=WP_002918568.1;transl_table=11 NZ_CP085478.1 RefSeq gene 769481 770419 . - . ID=gene-LI478_RS03850;Name=mdh;gbkey=Gene;gene=mdh;gene_biotype=protein_coding;locus_tag=LI478_RS03850 NZ_CP085478.1 Protein Homology CDS 769481 770419 . - 0 ID=cds-WP_002918570.1;Parent=gene-LI478_RS03850;Dbxref=Genbank:WP_002918570.1;Name=WP_002918570.1;Ontology_term=GO:0006099,GO:0030060;gbkey=CDS;gene=mdh;go_function=L-malate dehydrogenase activity|0030060||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000861594.1;locus_tag=LI478_RS03850;product=malate dehydrogenase;protein_id=WP_002918570.1;transl_table=11 NZ_CP085478.1 RefSeq gene 770834 771304 . + . ID=gene-LI478_RS03855;Name=argR;gbkey=Gene;gene=argR;gene_biotype=protein_coding;locus_tag=LI478_RS03855 NZ_CP085478.1 Protein Homology CDS 770834 771304 . + 0 ID=cds-WP_002918625.1;Parent=gene-LI478_RS03855;Dbxref=Genbank:WP_002918625.1;Name=WP_002918625.1;gbkey=CDS;gene=argR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210173.1;locus_tag=LI478_RS03855;product=transcriptional regulator ArgR;protein_id=WP_002918625.1;transl_table=11 NZ_CP085478.1 RefSeq gene 771680 771943 . + . ID=gene-LI478_RS03860;Name=yhcN;gbkey=Gene;gene=yhcN;gene_biotype=protein_coding;locus_tag=LI478_RS03860 NZ_CP085478.1 Protein Homology CDS 771680 771943 . + 0 ID=cds-WP_002918626.1;Parent=gene-LI478_RS03860;Dbxref=Genbank:WP_002918626.1;Name=WP_002918626.1;gbkey=CDS;gene=yhcN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229077.1;locus_tag=LI478_RS03860;product=peroxide/acid stress response protein YhcN;protein_id=WP_002918626.1;transl_table=11 NZ_CP085478.1 RefSeq gene 772042 772308 . + . ID=gene-LI478_RS03865;Name=yhcN-B;gbkey=Gene;gene=yhcN-B;gene_biotype=protein_coding;locus_tag=LI478_RS03865 NZ_CP085478.1 Protein Homology CDS 772042 772308 . + 0 ID=cds-WP_002918627.1;Parent=gene-LI478_RS03865;Dbxref=Genbank:WP_002918627.1;Name=WP_002918627.1;gbkey=CDS;gene=yhcN-B;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462272.1;locus_tag=LI478_RS03865;product=DUF1471 family stress response protein YhcN-B;protein_id=WP_002918627.1;transl_table=11 NZ_CP085478.1 RefSeq gene 772359 772634 . - . ID=gene-LI478_RS03870;Name=LI478_RS03870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS03870 NZ_CP085478.1 Protein Homology CDS 772359 772634 . - 0 ID=cds-WP_002918629.1;Parent=gene-LI478_RS03870;Dbxref=Genbank:WP_002918629.1;Name=WP_002918629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229079.1;locus_tag=LI478_RS03870;product=barstar family protein;protein_id=WP_002918629.1;transl_table=11 NZ_CP085478.1 RefSeq gene 772714 774681 . - . ID=gene-LI478_RS03875;Name=aaeB;gbkey=Gene;gene=aaeB;gene_biotype=protein_coding;locus_tag=LI478_RS03875 NZ_CP085478.1 Protein Homology CDS 772714 774681 . - 0 ID=cds-WP_002918632.1;Parent=gene-LI478_RS03875;Dbxref=Genbank:WP_002918632.1;Name=WP_002918632.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=aaeB;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012540451.1;locus_tag=LI478_RS03875;product=p-hydroxybenzoic acid efflux pump subunit AaeB;protein_id=WP_002918632.1;transl_table=11 NZ_CP085478.1 RefSeq gene 774687 775619 . - . ID=gene-LI478_RS03880;Name=aaeA;gbkey=Gene;gene=aaeA;gene_biotype=protein_coding;locus_tag=LI478_RS03880 NZ_CP085478.1 Protein Homology CDS 774687 775619 . - 0 ID=cds-WP_002918639.1;Parent=gene-LI478_RS03880;Dbxref=Genbank:WP_002918639.1;Name=WP_002918639.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=aaeA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229081.1;locus_tag=LI478_RS03880;product=p-hydroxybenzoic acid efflux pump subunit AaeA;protein_id=WP_002918639.1;transl_table=11 NZ_CP085478.1 RefSeq gene 775627 775830 . - . ID=gene-LI478_RS03885;Name=aaeX;gbkey=Gene;gene=aaeX;gene_biotype=protein_coding;locus_tag=LI478_RS03885 NZ_CP085478.1 Protein Homology CDS 775627 775830 . - 0 ID=cds-WP_002918640.1;Parent=gene-LI478_RS03885;Dbxref=Genbank:WP_002918640.1;Name=WP_002918640.1;gbkey=CDS;gene=aaeX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000051842.1;locus_tag=LI478_RS03885;product=p-hydroxybenzoic acid efflux pump operon protein AaeX;protein_id=WP_002918640.1;transl_table=11 NZ_CP085478.1 RefSeq gene 775962 776891 . + . ID=gene-LI478_RS03890;Name=aaeR;gbkey=Gene;gene=aaeR;gene_biotype=protein_coding;locus_tag=LI478_RS03890 NZ_CP085478.1 Protein Homology CDS 775962 776891 . + 0 ID=cds-WP_002918641.1;Parent=gene-LI478_RS03890;Dbxref=Genbank:WP_002918641.1;Name=WP_002918641.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=aaeR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462277.1;locus_tag=LI478_RS03890;product=HTH-type transcriptional activator AaeR;protein_id=WP_002918641.1;transl_table=11 NZ_CP085478.1 RefSeq gene 776927 778372 . - . ID=gene-LI478_RS03895;Name=tldD;gbkey=Gene;gene=tldD;gene_biotype=protein_coding;locus_tag=LI478_RS03895 NZ_CP085478.1 Protein Homology CDS 776927 778372 . - 0 ID=cds-WP_004144958.1;Parent=gene-LI478_RS03895;Dbxref=Genbank:WP_004144958.1;Name=WP_004144958.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=tldD;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007888214.1;locus_tag=LI478_RS03895;product=metalloprotease TldD;protein_id=WP_004144958.1;transl_table=11 NZ_CP085478.1 RefSeq gene 778461 782258 . - . ID=gene-LI478_RS03900;Name=yhdP;gbkey=Gene;gene=yhdP;gene_biotype=protein_coding;locus_tag=LI478_RS03900 NZ_CP085478.1 Protein Homology CDS 778461 782258 . - 0 ID=cds-WP_040219101.1;Parent=gene-LI478_RS03900;Dbxref=Genbank:WP_040219101.1;Name=WP_040219101.1;gbkey=CDS;gene=yhdP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229085.1;locus_tag=LI478_RS03900;product=AsmA2 domain-containing protein YhdP;protein_id=WP_040219101.1;transl_table=11 NZ_CP085478.1 RefSeq gene 782296 783765 . - . ID=gene-LI478_RS03905;Name=rng;gbkey=Gene;gene=rng;gene_biotype=protein_coding;locus_tag=LI478_RS03905 NZ_CP085478.1 Protein Homology CDS 782296 783765 . - 0 ID=cds-WP_002918644.1;Parent=gene-LI478_RS03905;Dbxref=Genbank:WP_002918644.1;Name=WP_002918644.1;Ontology_term=GO:0006396,GO:0003723,GO:0004540;gbkey=CDS;gene=rng;go_function=RNA binding|0003723||IEA,ribonuclease activity|0004540||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818051.1;locus_tag=LI478_RS03905;product=ribonuclease G;protein_id=WP_002918644.1;transl_table=11 NZ_CP085478.1 RefSeq gene 783768 784349 . - . ID=gene-LI478_RS03910;Name=LI478_RS03910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS03910 NZ_CP085478.1 Protein Homology CDS 783768 784349 . - 0 ID=cds-WP_002918646.1;Parent=gene-LI478_RS03910;Dbxref=Genbank:WP_002918646.1;Name=WP_002918646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229087.1;locus_tag=LI478_RS03910;product=Maf family protein;protein_id=WP_002918646.1;transl_table=11 NZ_CP085478.1 RefSeq gene 784357 784845 . - . ID=gene-LI478_RS03915;Name=mreD;gbkey=Gene;gene=mreD;gene_biotype=protein_coding;locus_tag=LI478_RS03915 NZ_CP085478.1 Protein Homology CDS 784357 784845 . - 0 ID=cds-WP_002918648.1;Parent=gene-LI478_RS03915;Dbxref=Genbank:WP_002918648.1;Name=WP_002918648.1;gbkey=CDS;gene=mreD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001487551.1;locus_tag=LI478_RS03915;product=rod shape-determining protein MreD;protein_id=WP_002918648.1;transl_table=11 NZ_CP085478.1 RefSeq gene 784845 785837 . - . ID=gene-LI478_RS03920;Name=mreC;gbkey=Gene;gene=mreC;gene_biotype=protein_coding;locus_tag=LI478_RS03920 NZ_CP085478.1 Protein Homology CDS 784845 785837 . - 0 ID=cds-WP_004149974.1;Parent=gene-LI478_RS03920;Dbxref=Genbank:WP_004149974.1;Name=WP_004149974.1;Ontology_term=GO:0008360;gbkey=CDS;gene=mreC;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229089.1;locus_tag=LI478_RS03920;product=rod shape-determining protein MreC;protein_id=WP_004149974.1;transl_table=11 NZ_CP085478.1 RefSeq gene 785908 786951 . - . ID=gene-LI478_RS03925;Name=mreB;gbkey=Gene;gene=mreB;gene_biotype=protein_coding;locus_tag=LI478_RS03925 NZ_CP085478.1 Protein Homology CDS 785908 786951 . - 0 ID=cds-WP_002918653.1;Parent=gene-LI478_RS03925;Dbxref=Genbank:WP_002918653.1;Name=WP_002918653.1;gbkey=CDS;gene=mreB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000913396.1;locus_tag=LI478_RS03925;product=rod shape-determining protein MreB;protein_id=WP_002918653.1;transl_table=11 NZ_CP085478.1 RefSeq gene 787257 789197 . - . ID=gene-LI478_RS03930;Name=csrD;gbkey=Gene;gene=csrD;gene_biotype=protein_coding;locus_tag=LI478_RS03930 NZ_CP085478.1 Protein Homology CDS 787257 789197 . - 0 ID=cds-WP_004174110.1;Parent=gene-LI478_RS03930;Dbxref=Genbank:WP_004174110.1;Name=WP_004174110.1;gbkey=CDS;gene=csrD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229091.1;locus_tag=LI478_RS03930;product=RNase E specificity factor CsrD;protein_id=WP_004174110.1;transl_table=11 NZ_CP085478.1 RefSeq gene 789277 789468 . - . ID=gene-LI478_RS03935;Name=LI478_RS03935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS03935 NZ_CP085478.1 Protein Homology CDS 789277 789468 . - 0 ID=cds-WP_002918687.1;Parent=gene-LI478_RS03935;Dbxref=Genbank:WP_002918687.1;Name=WP_002918687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229092.1;locus_tag=LI478_RS03935;product=hypothetical protein;protein_id=WP_002918687.1;transl_table=11 NZ_CP085478.1 RefSeq gene 789697 790698 . + . ID=gene-LI478_RS03940;Name=msrP;gbkey=Gene;gene=msrP;gene_biotype=protein_coding;locus_tag=LI478_RS03940 NZ_CP085478.1 Protein Homology CDS 789697 790698 . + 0 ID=cds-WP_064153258.1;Parent=gene-LI478_RS03940;Dbxref=Genbank:WP_064153258.1;Name=WP_064153258.1;Ontology_term=GO:0030091,GO:0016667,GO:0043546;gbkey=CDS;gene=msrP;go_function=oxidoreductase activity%2C acting on a sulfur group of donors|0016667||IEA,molybdopterin cofactor binding|0043546||IEA;go_process=protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229093.1;locus_tag=LI478_RS03940;product=protein-methionine-sulfoxide reductase catalytic subunit MsrP;protein_id=WP_064153258.1;transl_table=11 NZ_CP085478.1 RefSeq gene 790698 791306 . + . ID=gene-LI478_RS03945;Name=msrQ;gbkey=Gene;gene=msrQ;gene_biotype=protein_coding;locus_tag=LI478_RS03945 NZ_CP085478.1 Protein Homology CDS 790698 791306 . + 0 ID=cds-WP_004889547.1;Parent=gene-LI478_RS03945;Dbxref=Genbank:WP_004889547.1;Name=WP_004889547.1;gbkey=CDS;gene=msrQ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229094.1;locus_tag=LI478_RS03945;product=protein-methionine-sulfoxide reductase heme-binding subunit MsrQ;protein_id=WP_004889547.1;transl_table=11 NZ_CP085478.1 RefSeq gene 791530 791982 . + . ID=gene-LI478_RS03950;Name=aroQ;gbkey=Gene;gene=aroQ;gene_biotype=protein_coding;locus_tag=LI478_RS03950 NZ_CP085478.1 Protein Homology CDS 791530 791982 . + 0 ID=cds-WP_004174104.1;Parent=gene-LI478_RS03950;Dbxref=Genbank:WP_004174104.1;Name=WP_004174104.1;Ontology_term=GO:0009423,GO:0003855;gbkey=CDS;gene=aroQ;go_function=3-dehydroquinate dehydratase activity|0003855||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229095.1;locus_tag=LI478_RS03950;product=type II 3-dehydroquinate dehydratase;protein_id=WP_004174104.1;transl_table=11 NZ_CP085478.1 RefSeq gene 792005 792472 . + . ID=gene-LI478_RS03955;Name=accB;gbkey=Gene;gene=accB;gene_biotype=protein_coding;locus_tag=LI478_RS03955 NZ_CP085478.1 Protein Homology CDS 792005 792472 . + 0 ID=cds-WP_002918736.1;Parent=gene-LI478_RS03955;Dbxref=Genbank:WP_002918736.1;Name=WP_002918736.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accB;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229096.1;locus_tag=LI478_RS03955;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;protein_id=WP_002918736.1;transl_table=11 NZ_CP085478.1 RefSeq gene 792483 793832 . + . ID=gene-LI478_RS03960;Name=accC;gbkey=Gene;gene=accC;gene_biotype=protein_coding;locus_tag=LI478_RS03960 NZ_CP085478.1 Protein Homology CDS 792483 793832 . + 0 ID=cds-WP_004174096.1;Parent=gene-LI478_RS03960;Dbxref=Genbank:WP_004174096.1;Name=WP_004174096.1;Ontology_term=GO:0006633,GO:0003989,GO:0004075,GO:0009317;gbkey=CDS;gene=accC;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA,biotin carboxylase activity|0004075||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009483995.1;locus_tag=LI478_RS03960;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=WP_004174096.1;transl_table=11 NZ_CP085478.1 RefSeq gene 793943 794185 . + . ID=gene-LI478_RS03965;Name=LI478_RS03965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS03965 NZ_CP085478.1 Protein Homology CDS 793943 794185 . + 0 ID=cds-WP_002918740.1;Parent=gene-LI478_RS03965;Dbxref=Genbank:WP_002918740.1;Name=WP_002918740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229098.1;locus_tag=LI478_RS03965;product=YhdT family protein;protein_id=WP_002918740.1;transl_table=11 NZ_CP085478.1 RefSeq gene 794175 795626 . + . ID=gene-LI478_RS03970;Name=panF;gbkey=Gene;gene=panF;gene_biotype=protein_coding;locus_tag=LI478_RS03970 NZ_CP085478.1 Protein Homology CDS 794175 795626 . + 0 ID=cds-WP_004174094.1;Parent=gene-LI478_RS03970;Dbxref=Genbank:WP_004174094.1;Name=WP_004174094.1;Ontology_term=GO:0015887,GO:0015937,GO:0015498;gbkey=CDS;gene=panF;go_function=pantothenate:sodium symporter activity|0015498||IEA;go_process=pantothenate transmembrane transport|0015887||IEA,coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229099.1;locus_tag=LI478_RS03970;product=sodium/pantothenate symporter;protein_id=WP_004174094.1;transl_table=11 NZ_CP085478.1 RefSeq gene 795638 796519 . + . ID=gene-LI478_RS03975;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;locus_tag=LI478_RS03975 NZ_CP085478.1 Protein Homology CDS 795638 796519 . + 0 ID=cds-WP_002918745.1;Parent=gene-LI478_RS03975;Dbxref=Genbank:WP_002918745.1;Name=WP_002918745.1;Ontology_term=GO:0036211,GO:0008757;gbkey=CDS;gene=prmA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229100.1;locus_tag=LI478_RS03975;product=50S ribosomal protein L11 methyltransferase;protein_id=WP_002918745.1;transl_table=11 NZ_CP085478.1 RefSeq pseudogene 796877 797885 . + . ID=gene-LI478_RS03980;Name=dusB;gbkey=Gene;gene=dusB;gene_biotype=pseudogene;locus_tag=LI478_RS03980;pseudo=true NZ_CP085478.1 Protein Homology CDS 796877 797885 . + 0 ID=cds-LI478_RS03980;Parent=gene-LI478_RS03980;Note=frameshifted;Ontology_term=GO:0008033,GO:0003824,GO:0016491,GO:0017150,GO:0050660;gbkey=CDS;gene=dusB;go_function=catalytic activity|0003824||IEA,oxidoreductase activity|0016491||IEA,tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004936856.1;locus_tag=LI478_RS03980;product=tRNA dihydrouridine synthase DusB;pseudo=true;transl_table=11 NZ_CP085478.1 RefSeq gene 797867 798163 . + . ID=gene-LI478_RS03985;Name=fis;gbkey=Gene;gene=fis;gene_biotype=protein_coding;locus_tag=LI478_RS03985 NZ_CP085478.1 Protein Homology CDS 797867 798163 . + 0 ID=cds-WP_000462905.1;Parent=gene-LI478_RS03985;Dbxref=Genbank:WP_000462905.1;Name=WP_000462905.1;gbkey=CDS;gene=fis;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001465625.1;locus_tag=LI478_RS03985;product=DNA-binding transcriptional regulator Fis;protein_id=WP_000462905.1;transl_table=11 NZ_CP085478.1 RefSeq gene 798248 798901 . - . ID=gene-LI478_RS03990;Name=envR;gbkey=Gene;gene=envR;gene_biotype=protein_coding;locus_tag=LI478_RS03990 NZ_CP085478.1 Protein Homology CDS 798248 798901 . - 0 ID=cds-WP_004185881.1;Parent=gene-LI478_RS03990;Dbxref=Genbank:WP_004185881.1;Name=WP_004185881.1;gbkey=CDS;gene=envR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004144973.1;locus_tag=LI478_RS03990;product=acrEF/envCD operon transcriptional regulator;protein_id=WP_004185881.1;transl_table=11 NZ_CP085478.1 RefSeq gene 799280 800419 . + . ID=gene-LI478_RS03995;Name=LI478_RS03995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS03995 NZ_CP085478.1 Protein Homology CDS 799280 800419 . + 0 ID=cds-WP_064153256.1;Parent=gene-LI478_RS03995;Dbxref=Genbank:WP_064153256.1;Name=WP_064153256.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229126.1;locus_tag=LI478_RS03995;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_064153256.1;transl_table=11 NZ_CP085478.1 RefSeq gene 800432 803542 . + . ID=gene-LI478_RS04000;Name=LI478_RS04000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS04000 NZ_CP085478.1 Protein Homology CDS 800432 803542 . + 0 ID=cds-WP_064153254.1;Parent=gene-LI478_RS04000;Dbxref=Genbank:WP_064153254.1;Name=WP_064153254.1;Ontology_term=GO:0006810,GO:0015562,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229127.1;locus_tag=LI478_RS04000;product=efflux RND transporter permease subunit;protein_id=WP_064153254.1;transl_table=11 NZ_CP085478.1 RefSeq gene 803836 804057 . + . ID=gene-LI478_RS04005;Name=LI478_RS04005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS04005 NZ_CP085478.1 Protein Homology CDS 803836 804057 . + 0 ID=cds-WP_002919103.1;Parent=gene-LI478_RS04005;Dbxref=Genbank:WP_002919103.1;Name=WP_002919103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229128.1;locus_tag=LI478_RS04005;product=membrane protein;protein_id=WP_002919103.1;transl_table=11 NZ_CP085478.1 RefSeq gene 804285 804400 . - . ID=gene-LI478_RS04010;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=LI478_RS04010 NZ_CP085478.1 cmsearch rRNA 804285 804400 . - . ID=rna-LI478_RS04010;Parent=gene-LI478_RS04010;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LI478_RS04010;product=5S ribosomal RNA NZ_CP085478.1 cmsearch exon 804285 804400 . - . ID=exon-LI478_RS04010-1;Parent=rna-LI478_RS04010;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LI478_RS04010;product=5S ribosomal RNA NZ_CP085478.1 RefSeq gene 804439 804514 . - . ID=gene-LI478_RS04015;Name=LI478_RS04015;gbkey=Gene;gene_biotype=tRNA;locus_tag=LI478_RS04015 NZ_CP085478.1 tRNAscan-SE tRNA 804439 804514 . - . ID=rna-LI478_RS04015;Parent=gene-LI478_RS04015;anticodon=(pos:complement(804479..804481));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS04015;product=tRNA-Thr NZ_CP085478.1 tRNAscan-SE exon 804439 804514 . - . ID=exon-LI478_RS04015-1;Parent=rna-LI478_RS04015;anticodon=(pos:complement(804479..804481));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS04015;product=tRNA-Thr NZ_CP085478.1 RefSeq gene 804529 804644 . - . ID=gene-LI478_RS04020;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=LI478_RS04020 NZ_CP085478.1 cmsearch rRNA 804529 804644 . - . ID=rna-LI478_RS04020;Parent=gene-LI478_RS04020;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LI478_RS04020;product=5S ribosomal RNA NZ_CP085478.1 cmsearch exon 804529 804644 . - . ID=exon-LI478_RS04020-1;Parent=rna-LI478_RS04020;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LI478_RS04020;product=5S ribosomal RNA NZ_CP085478.1 RefSeq gene 804741 807642 . - . ID=gene-LI478_RS04025;Name=LI478_RS04025;gbkey=Gene;gene_biotype=rRNA;locus_tag=LI478_RS04025 NZ_CP085478.1 cmsearch rRNA 804741 807642 . - . ID=rna-LI478_RS04025;Parent=gene-LI478_RS04025;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LI478_RS04025;product=23S ribosomal RNA NZ_CP085478.1 cmsearch exon 804741 807642 . - . ID=exon-LI478_RS04025-1;Parent=rna-LI478_RS04025;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LI478_RS04025;product=23S ribosomal RNA NZ_CP085478.1 RefSeq gene 807841 809380 . - . ID=gene-LI478_RS04030;Name=LI478_RS04030;gbkey=Gene;gene_biotype=rRNA;locus_tag=LI478_RS04030 NZ_CP085478.1 cmsearch rRNA 807841 809380 . - . ID=rna-LI478_RS04030;Parent=gene-LI478_RS04030;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LI478_RS04030;product=16S ribosomal RNA NZ_CP085478.1 cmsearch exon 807841 809380 . - . ID=exon-LI478_RS04030-1;Parent=rna-LI478_RS04030;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LI478_RS04030;product=16S ribosomal RNA NZ_CP085478.1 RefSeq gene 809851 810405 . + . ID=gene-LI478_RS04035;Name=LI478_RS04035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS04035 NZ_CP085478.1 Protein Homology CDS 809851 810405 . + 0 ID=cds-WP_064153729.1;Parent=gene-LI478_RS04035;Dbxref=Genbank:WP_064153729.1;Name=WP_064153729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012967157.1;locus_tag=LI478_RS04035;product=gamma carbonic anhydrase family protein;protein_id=WP_064153729.1;transl_table=11 NZ_CP085478.1 RefSeq gene 810381 810638 . - . ID=gene-LI478_RS04040;Name=LI478_RS04040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS04040 NZ_CP085478.1 Protein Homology CDS 810381 810638 . - 0 ID=cds-WP_064153730.1;Parent=gene-LI478_RS04040;Dbxref=Genbank:WP_064153730.1;Name=WP_064153730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229130.1;locus_tag=LI478_RS04040;product=DUF1488 domain-containing protein;protein_id=WP_064153730.1;transl_table=11 NZ_CP085478.1 RefSeq gene 810635 811453 . - . ID=gene-LI478_RS04045;Name=aroE;gbkey=Gene;gene=aroE;gene_biotype=protein_coding;locus_tag=LI478_RS04045 NZ_CP085478.1 Protein Homology CDS 810635 811453 . - 0 ID=cds-WP_002919126.1;Parent=gene-LI478_RS04045;Dbxref=Genbank:WP_002919126.1;Name=WP_002919126.1;Ontology_term=GO:0019632,GO:0004764;gbkey=CDS;gene=aroE;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA;go_process=shikimate metabolic process|0019632||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229131.1;locus_tag=LI478_RS04045;product=shikimate dehydrogenase;protein_id=WP_002919126.1;transl_table=11 NZ_CP085478.1 RefSeq gene 811457 812029 . - . ID=gene-LI478_RS04050;Name=tsaC;gbkey=Gene;gene=tsaC;gene_biotype=protein_coding;locus_tag=LI478_RS04050 NZ_CP085478.1 Protein Homology CDS 811457 812029 . - 0 ID=cds-WP_002919132.1;Parent=gene-LI478_RS04050;Dbxref=Genbank:WP_002919132.1;Name=WP_002919132.1;Ontology_term=GO:0002949,GO:0003725,GO:0005524;gbkey=CDS;gene=tsaC;go_function=double-stranded RNA binding|0003725||IEA,ATP binding|0005524||IEA;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229132.1;locus_tag=LI478_RS04050;product=L-threonylcarbamoyladenylate synthase type 1 TsaC;protein_id=WP_002919132.1;transl_table=11 NZ_CP085478.1 RefSeq gene 812034 812576 . - . ID=gene-LI478_RS04055;Name=LI478_RS04055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS04055 NZ_CP085478.1 Protein Homology CDS 812034 812576 . - 0 ID=cds-WP_004145330.1;Parent=gene-LI478_RS04055;Dbxref=Genbank:WP_004145330.1;Name=WP_004145330.1;Ontology_term=GO:0006265,GO:0003677,GO:0003916,GO:0005694;gbkey=CDS;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229133.1;locus_tag=LI478_RS04055;product=type I DNA topoisomerase;protein_id=WP_004145330.1;transl_table=11 NZ_CP085478.1 RefSeq gene 812603 813076 . - . ID=gene-LI478_RS04060;Name=smg;gbkey=Gene;gene=smg;gene_biotype=protein_coding;locus_tag=LI478_RS04060 NZ_CP085478.1 Protein Homology CDS 812603 813076 . - 0 ID=cds-WP_002919137.1;Parent=gene-LI478_RS04060;Dbxref=Genbank:WP_002919137.1;Name=WP_002919137.1;gbkey=CDS;gene=smg;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134083.1;locus_tag=LI478_RS04060;product=DUF494 family protein Smg;protein_id=WP_002919137.1;transl_table=11 NZ_CP085478.1 RefSeq gene 813048 814172 . - . ID=gene-LI478_RS04065;Name=dprA;gbkey=Gene;gene=dprA;gene_biotype=protein_coding;locus_tag=LI478_RS04065 NZ_CP085478.1 Protein Homology CDS 813048 814172 . - 0 ID=cds-WP_004185889.1;Parent=gene-LI478_RS04065;Dbxref=Genbank:WP_004185889.1;Name=WP_004185889.1;Ontology_term=GO:0009294;gbkey=CDS;gene=dprA;go_process=DNA-mediated transformation|0009294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229135.1;locus_tag=LI478_RS04065;product=DNA-protecting protein DprA;protein_id=WP_004185889.1;transl_table=11 NZ_CP085478.1 RefSeq gene 814301 814810 . + . ID=gene-LI478_RS04070;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=LI478_RS04070 NZ_CP085478.1 Protein Homology CDS 814301 814810 . + 0 ID=cds-WP_004174081.1;Parent=gene-LI478_RS04070;Dbxref=Genbank:WP_004174081.1;Name=WP_004174081.1;Ontology_term=GO:0036211,GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229136.1;locus_tag=LI478_RS04070;product=peptide deformylase;protein_id=WP_004174081.1;transl_table=11 NZ_CP085478.1 RefSeq gene 814825 815772 . + . ID=gene-LI478_RS04075;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=LI478_RS04075 NZ_CP085478.1 Protein Homology CDS 814825 815772 . + 0 ID=cds-WP_032415753.1;Parent=gene-LI478_RS04075;Dbxref=Genbank:WP_032415753.1;Name=WP_032415753.1;Ontology_term=GO:0006431,GO:0004479,GO:0005737;gbkey=CDS;gene=fmt;go_component=cytoplasm|0005737||IEA;go_function=methionyl-tRNA formyltransferase activity|0004479||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229137.1;locus_tag=LI478_RS04075;product=methionyl-tRNA formyltransferase;protein_id=WP_032415753.1;transl_table=11 NZ_CP085478.1 RefSeq gene 815825 817120 . + . ID=gene-LI478_RS04080;Name=rsmB;gbkey=Gene;gene=rsmB;gene_biotype=protein_coding;locus_tag=LI478_RS04080 NZ_CP085478.1 Protein Homology CDS 815825 817120 . + 0 ID=cds-WP_004174079.1;Parent=gene-LI478_RS04080;Dbxref=Genbank:WP_004174079.1;Name=WP_004174079.1;Ontology_term=GO:0001510,GO:0006355,GO:0006364,GO:0003723,GO:0008649;gbkey=CDS;gene=rsmB;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;go_process=RNA methylation|0001510||IEA,regulation of DNA-templated transcription|0006355||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229138.1;locus_tag=LI478_RS04080;product=16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB;protein_id=WP_004174079.1;transl_table=11 NZ_CP085478.1 RefSeq gene 817134 818510 . + . ID=gene-LI478_RS04085;Name=trkA;gbkey=Gene;gene=trkA;gene_biotype=protein_coding;locus_tag=LI478_RS04085 NZ_CP085478.1 Protein Homology CDS 817134 818510 . + 0 ID=cds-WP_002919153.1;Parent=gene-LI478_RS04085;Dbxref=Genbank:WP_002919153.1;Name=WP_002919153.1;Ontology_term=GO:0006813,GO:0015079,GO:0016020;gbkey=CDS;gene=trkA;go_component=membrane|0016020||IEA;go_function=potassium ion transmembrane transporter activity|0015079||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004125888.1;locus_tag=LI478_RS04085;product=Trk system potassium transporter TrkA;protein_id=WP_002919153.1;transl_table=11 NZ_CP085478.1 RefSeq gene 818651 819064 . + . ID=gene-LI478_RS04090;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=LI478_RS04090 NZ_CP085478.1 Protein Homology CDS 818651 819064 . + 0 ID=cds-WP_004145325.1;Parent=gene-LI478_RS04090;Dbxref=Genbank:WP_004145325.1;Name=WP_004145325.1;gbkey=CDS;gene=mscL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229140.1;locus_tag=LI478_RS04090;product=large-conductance mechanosensitive channel protein MscL;protein_id=WP_004145325.1;transl_table=11 NZ_CP085478.1 RefSeq gene 819000 819278 . - . ID=gene-LI478_RS04095;Name=LI478_RS04095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS04095 NZ_CP085478.1 Protein Homology CDS 819000 819278 . - 0 ID=cds-WP_004188380.1;Parent=gene-LI478_RS04095;Dbxref=Genbank:WP_004188380.1;Name=WP_004188380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004145324.1;locus_tag=LI478_RS04095;product=ribosome alternative rescue factor ArfA;protein_id=WP_004188380.1;transl_table=11 NZ_CP085478.1 RefSeq gene 819336 819761 . - . ID=gene-LI478_RS04100;Name=zntR;gbkey=Gene;gene=zntR;gene_biotype=protein_coding;locus_tag=LI478_RS04100 NZ_CP085478.1 Protein Homology CDS 819336 819761 . - 0 ID=cds-WP_004185894.1;Parent=gene-LI478_RS04100;Dbxref=Genbank:WP_004185894.1;Name=WP_004185894.1;Ontology_term=GO:0006355,GO:0003677,GO:0008270;gbkey=CDS;gene=zntR;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229141.1;locus_tag=LI478_RS04100;product=Zn(2+)-responsive transcriptional regulator;protein_id=WP_004185894.1;transl_table=11 NZ_CP085478.1 RefSeq gene 819764 820132 . - . ID=gene-LI478_RS04105;Name=LI478_RS04105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS04105 NZ_CP085478.1 Protein Homology CDS 819764 820132 . - 0 ID=cds-WP_002919204.1;Parent=gene-LI478_RS04105;Dbxref=Genbank:WP_002919204.1;Name=WP_002919204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229142.1;locus_tag=LI478_RS04105;product=DUF1992 domain-containing protein;protein_id=WP_002919204.1;transl_table=11 NZ_CP085478.1 RefSeq gene 820241 820627 . - . ID=gene-LI478_RS04110;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=LI478_RS04110 NZ_CP085478.1 Protein Homology CDS 820241 820627 . - 0 ID=cds-WP_002919206.1;Parent=gene-LI478_RS04110;Dbxref=Genbank:WP_002919206.1;Name=WP_002919206.1;Ontology_term=GO:0006412,GO:0003735,GO:0005762,GO:0022625;gbkey=CDS;gene=rplQ;go_component=mitochondrial large ribosomal subunit|0005762||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229143.1;locus_tag=LI478_RS04110;product=50S ribosomal protein L17;protein_id=WP_002919206.1;transl_table=11 NZ_CP085478.1 RefSeq gene 820668 821657 . - . ID=gene-LI478_RS04115;Name=rpoA;gbkey=Gene;gene=rpoA;gene_biotype=protein_coding;locus_tag=LI478_RS04115 NZ_CP085478.1 Protein Homology CDS 820668 821657 . - 0 ID=cds-WP_002919219.1;Parent=gene-LI478_RS04115;Dbxref=Genbank:WP_002919219.1;Name=WP_002919219.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899,GO:0046983;gbkey=CDS;gene=rpoA;go_function=DNA binding|0003677||IEA,DNA-directed 5'-3' RNA polymerase activity|0003899||IEA,protein dimerization activity|0046983||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005970247.1;locus_tag=LI478_RS04115;product=DNA-directed RNA polymerase subunit alpha;protein_id=WP_002919219.1;transl_table=11 NZ_CP085478.1 RefSeq gene 821683 822303 . - . ID=gene-LI478_RS04120;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=LI478_RS04120 NZ_CP085478.1 Protein Homology CDS 821683 822303 . - 0 ID=cds-WP_002919224.1;Parent=gene-LI478_RS04120;Dbxref=Genbank:WP_002919224.1;Name=WP_002919224.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0015935;gbkey=CDS;gene=rpsD;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004410410.1;locus_tag=LI478_RS04120;product=30S ribosomal protein S4;protein_id=WP_002919224.1;transl_table=11 NZ_CP085478.1 RefSeq gene 822337 822726 . - . ID=gene-LI478_RS04125;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=LI478_RS04125 NZ_CP085478.1 Protein Homology CDS 822337 822726 . - 0 ID=cds-WP_002919257.1;Parent=gene-LI478_RS04125;Dbxref=Genbank:WP_002919257.1;Name=WP_002919257.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001029758.1;locus_tag=LI478_RS04125;product=30S ribosomal protein S11;protein_id=WP_002919257.1;transl_table=11 NZ_CP085478.1 RefSeq gene 822743 823099 . - . ID=gene-LI478_RS04130;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=LI478_RS04130 NZ_CP085478.1 Protein Homology CDS 822743 823099 . - 0 ID=cds-WP_002919259.1;Parent=gene-LI478_RS04130;Dbxref=Genbank:WP_002919259.1;Name=WP_002919259.1;Ontology_term=GO:0006412,GO:0003735,GO:0022627;gbkey=CDS;gene=rpsM;go_component=cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019935869.1;locus_tag=LI478_RS04130;product=30S ribosomal protein S13;protein_id=WP_002919259.1;transl_table=11 NZ_CP085478.1 RefSeq gene 823246 823362 . - . ID=gene-LI478_RS04135;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=LI478_RS04135 NZ_CP085478.1 Protein Homology CDS 823246 823362 . - 0 ID=cds-WP_000868187.1;Parent=gene-LI478_RS04135;Dbxref=Genbank:WP_000868187.1;Name=WP_000868187.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmJ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020322760.1;locus_tag=LI478_RS04135;product=50S ribosomal protein L36;protein_id=WP_000868187.1;transl_table=11 NZ_CP085478.1 RefSeq gene 823396 824727 . - . ID=gene-LI478_RS04140;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=LI478_RS04140 NZ_CP085478.1 Protein Homology CDS 823396 824727 . - 0 ID=cds-WP_002919515.1;Parent=gene-LI478_RS04140;Dbxref=Genbank:WP_002919515.1;Name=WP_002919515.1;Ontology_term=GO:0043952,GO:0015450,GO:0005886;gbkey=CDS;gene=secY;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004868351.1;locus_tag=LI478_RS04140;product=preprotein translocase subunit SecY;protein_id=WP_002919515.1;transl_table=11 NZ_CP085478.1 RefSeq gene 824735 825169 . - . ID=gene-LI478_RS04145;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=LI478_RS04145 NZ_CP085478.1 Protein Homology CDS 824735 825169 . - 0 ID=cds-WP_002919516.1;Parent=gene-LI478_RS04145;Dbxref=Genbank:WP_002919516.1;Name=WP_002919516.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplO;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011095501.1;locus_tag=LI478_RS04145;product=50S ribosomal protein L15;protein_id=WP_002919516.1;transl_table=11 NZ_CP085478.1 RefSeq gene 825173 825352 . - . ID=gene-LI478_RS04150;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=LI478_RS04150 NZ_CP085478.1 Protein Homology CDS 825173 825352 . - 0 ID=cds-WP_001140434.1;Parent=gene-LI478_RS04150;Dbxref=Genbank:WP_001140434.1;Name=WP_001140434.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmD;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012147215.1;locus_tag=LI478_RS04150;product=50S ribosomal protein L30;protein_id=WP_001140434.1;transl_table=11 NZ_CP085478.1 RefSeq gene 825356 825859 . - . ID=gene-LI478_RS04155;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=LI478_RS04155 NZ_CP085478.1 Protein Homology CDS 825356 825859 . - 0 ID=cds-WP_002919545.1;Parent=gene-LI478_RS04155;Dbxref=Genbank:WP_002919545.1;Name=WP_002919545.1;Ontology_term=GO:0006412,GO:0003735,GO:0000312,GO:0022627;gbkey=CDS;gene=rpsE;go_component=plastid small ribosomal subunit|0000312||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004106339.1;locus_tag=LI478_RS04155;product=30S ribosomal protein S5;protein_id=WP_002919545.1;transl_table=11 NZ_CP085478.1 RefSeq gene 825874 826227 . - . ID=gene-LI478_RS04160;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=LI478_RS04160 NZ_CP085478.1 Protein Homology CDS 825874 826227 . - 0 ID=cds-WP_000358960.1;Parent=gene-LI478_RS04160;Dbxref=Genbank:WP_000358960.1;Name=WP_000358960.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplR;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005970258.1;locus_tag=LI478_RS04160;product=50S ribosomal protein L18;protein_id=WP_000358960.1;transl_table=11 NZ_CP085478.1 RefSeq gene 826237 826770 . - . ID=gene-LI478_RS04165;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=LI478_RS04165 NZ_CP085478.1 Protein Homology CDS 826237 826770 . - 0 ID=cds-WP_002919662.1;Parent=gene-LI478_RS04165;Dbxref=Genbank:WP_002919662.1;Name=WP_002919662.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0022625;gbkey=CDS;gene=rplF;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003031129.1;locus_tag=LI478_RS04165;product=50S ribosomal protein L6;protein_id=WP_002919662.1;transl_table=11 NZ_CP085478.1 RefSeq gene 826783 827175 . - . ID=gene-LI478_RS04170;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=LI478_RS04170 NZ_CP085478.1 Protein Homology CDS 826783 827175 . - 0 ID=cds-WP_002919665.1;Parent=gene-LI478_RS04170;Dbxref=Genbank:WP_002919665.1;Name=WP_002919665.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsH;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148781.1;locus_tag=LI478_RS04170;product=30S ribosomal protein S8;protein_id=WP_002919665.1;transl_table=11 NZ_CP085478.1 RefSeq gene 827209 827514 . - . ID=gene-LI478_RS04175;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=LI478_RS04175 NZ_CP085478.1 Protein Homology CDS 827209 827514 . - 0 ID=cds-WP_002919667.1;Parent=gene-LI478_RS04175;Dbxref=Genbank:WP_002919667.1;Name=WP_002919667.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsN;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599304.1;locus_tag=LI478_RS04175;product=30S ribosomal protein S14;protein_id=WP_002919667.1;transl_table=11 NZ_CP085478.1 RefSeq gene 827529 828068 . - . ID=gene-LI478_RS04180;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=LI478_RS04180 NZ_CP085478.1 Protein Homology CDS 827529 828068 . - 0 ID=cds-WP_001096200.1;Parent=gene-LI478_RS04180;Dbxref=Genbank:WP_001096200.1;Name=WP_001096200.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001096198.1;locus_tag=LI478_RS04180;product=50S ribosomal protein L5;protein_id=WP_001096200.1;transl_table=11 NZ_CP085478.1 RefSeq gene 828083 828397 . - . ID=gene-LI478_RS04185;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=LI478_RS04185 NZ_CP085478.1 Protein Homology CDS 828083 828397 . - 0 ID=cds-WP_000729185.1;Parent=gene-LI478_RS04185;Dbxref=Genbank:WP_000729185.1;Name=WP_000729185.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplX;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000729185.1;locus_tag=LI478_RS04185;product=50S ribosomal protein L24;protein_id=WP_000729185.1;transl_table=11 NZ_CP085478.1 RefSeq gene 828408 828779 . - . ID=gene-LI478_RS04190;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=LI478_RS04190 NZ_CP085478.1 Protein Homology CDS 828408 828779 . - 0 ID=cds-WP_002919748.1;Parent=gene-LI478_RS04190;Dbxref=Genbank:WP_002919748.1;Name=WP_002919748.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplN;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005501250.1;locus_tag=LI478_RS04190;product=50S ribosomal protein L14;protein_id=WP_002919748.1;transl_table=11 NZ_CP085478.1 RefSeq gene 828945 829199 . - . ID=gene-LI478_RS04195;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=LI478_RS04195 NZ_CP085478.1 Protein Homology CDS 828945 829199 . - 0 ID=cds-WP_002919751.1;Parent=gene-LI478_RS04195;Dbxref=Genbank:WP_002919751.1;Name=WP_002919751.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006817275.1;locus_tag=LI478_RS04195;product=30S ribosomal protein S17;protein_id=WP_002919751.1;transl_table=11 NZ_CP085478.1 RefSeq gene 829199 829390 . - . ID=gene-LI478_RS04200;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;locus_tag=LI478_RS04200 NZ_CP085478.1 Protein Homology CDS 829199 829390 . - 0 ID=cds-WP_002919754.1;Parent=gene-LI478_RS04200;Dbxref=Genbank:WP_002919754.1;Name=WP_002919754.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmC;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000644743.1;locus_tag=LI478_RS04200;product=50S ribosomal protein L29;protein_id=WP_002919754.1;transl_table=11 NZ_CP085478.1 RefSeq gene 829390 829800 . - . ID=gene-LI478_RS04205;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=LI478_RS04205 NZ_CP085478.1 Protein Homology CDS 829390 829800 . - 0 ID=cds-WP_002919759.1;Parent=gene-LI478_RS04205;Dbxref=Genbank:WP_002919759.1;Name=WP_002919759.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplP;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017805229.1;locus_tag=LI478_RS04205;product=50S ribosomal protein L16;protein_id=WP_002919759.1;transl_table=11 NZ_CP085478.1 RefSeq gene 829813 830511 . - . ID=gene-LI478_RS04210;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=LI478_RS04210 NZ_CP085478.1 Protein Homology CDS 829813 830511 . - 0 ID=cds-WP_002919766.1;Parent=gene-LI478_RS04210;Dbxref=Genbank:WP_002919766.1;Name=WP_002919766.1;Ontology_term=GO:0006412,GO:0003735,GO:0000312,GO:0022627;gbkey=CDS;gene=rpsC;go_component=plastid small ribosomal subunit|0000312||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742302.1;locus_tag=LI478_RS04210;product=30S ribosomal protein S3;protein_id=WP_002919766.1;transl_table=11 NZ_CP085478.1 RefSeq gene 830529 830861 . - . ID=gene-LI478_RS04215;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=LI478_RS04215 NZ_CP085478.1 Protein Homology CDS 830529 830861 . - 0 ID=cds-WP_002919773.1;Parent=gene-LI478_RS04215;Dbxref=Genbank:WP_002919773.1;Name=WP_002919773.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplV;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000447526.1;locus_tag=LI478_RS04215;product=50S ribosomal protein L22;protein_id=WP_002919773.1;transl_table=11 NZ_CP085478.1 RefSeq gene 830876 831154 . - . ID=gene-LI478_RS04220;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=LI478_RS04220 NZ_CP085478.1 Protein Homology CDS 830876 831154 . - 0 ID=cds-WP_001138115.1;Parent=gene-LI478_RS04220;Dbxref=Genbank:WP_001138115.1;Name=WP_001138115.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsS;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148791.1;locus_tag=LI478_RS04220;product=30S ribosomal protein S19;protein_id=WP_001138115.1;transl_table=11 NZ_CP085478.1 RefSeq gene 831171 831992 . - . ID=gene-LI478_RS04225;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=LI478_RS04225 NZ_CP085478.1 Protein Homology CDS 831171 831992 . - 0 ID=cds-WP_002919786.1;Parent=gene-LI478_RS04225;Dbxref=Genbank:WP_002919786.1;Name=WP_002919786.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplB;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001738551.1;locus_tag=LI478_RS04225;product=50S ribosomal protein L2;protein_id=WP_002919786.1;transl_table=11 NZ_CP085478.1 RefSeq gene 832010 832312 . - . ID=gene-LI478_RS04230;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=LI478_RS04230 NZ_CP085478.1 Protein Homology CDS 832010 832312 . - 0 ID=cds-WP_000617546.1;Parent=gene-LI478_RS04230;Dbxref=Genbank:WP_000617546.1;Name=WP_000617546.1;gbkey=CDS;gene=rplW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007891652.1;locus_tag=LI478_RS04230;product=50S ribosomal protein L23;protein_id=WP_000617546.1;transl_table=11 NZ_CP085478.1 RefSeq gene 832309 832914 . - . ID=gene-LI478_RS04235;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=LI478_RS04235 NZ_CP085478.1 Protein Homology CDS 832309 832914 . - 0 ID=cds-WP_002919794.1;Parent=gene-LI478_RS04235;Dbxref=Genbank:WP_002919794.1;Name=WP_002919794.1;Ontology_term=GO:0006412,GO:0003735,GO:0022625;gbkey=CDS;gene=rplD;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010304939.1;locus_tag=LI478_RS04235;product=50S ribosomal protein L4;protein_id=WP_002919794.1;transl_table=11 NZ_CP085478.1 RefSeq gene 832925 833554 . - . ID=gene-LI478_RS04240;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=LI478_RS04240 NZ_CP085478.1 Protein Homology CDS 832925 833554 . - 0 ID=cds-WP_002919796.1;Parent=gene-LI478_RS04240;Dbxref=Genbank:WP_002919796.1;Name=WP_002919796.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000579825.1;locus_tag=LI478_RS04240;product=50S ribosomal protein L3;protein_id=WP_002919796.1;transl_table=11 NZ_CP085478.1 RefSeq gene 833587 833898 . - . ID=gene-LI478_RS04245;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=LI478_RS04245 NZ_CP085478.1 Protein Homology CDS 833587 833898 . - 0 ID=cds-WP_001181005.1;Parent=gene-LI478_RS04245;Dbxref=Genbank:WP_001181005.1;Name=WP_001181005.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsJ;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014268624.1;locus_tag=LI478_RS04245;product=30S ribosomal protein S10;protein_id=WP_001181005.1;transl_table=11 NZ_CP085478.1 RefSeq gene 834281 834766 . + . ID=gene-LI478_RS04250;Name=LI478_RS04250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS04250 NZ_CP085478.1 Protein Homology CDS 834281 834766 . + 0 ID=cds-WP_020801891.1;Parent=gene-LI478_RS04250;Dbxref=Genbank:WP_020801891.1;Name=WP_020801891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229171.1;locus_tag=LI478_RS04250;product=A24 family peptidase;protein_id=WP_020801891.1;transl_table=11 NZ_CP085478.1 RefSeq gene 834750 835226 . - . ID=gene-LI478_RS04255;Name=bfr;gbkey=Gene;gene=bfr;gene_biotype=protein_coding;locus_tag=LI478_RS04255 NZ_CP085478.1 Protein Homology CDS 834750 835226 . - 0 ID=cds-WP_002919971.1;Parent=gene-LI478_RS04255;Dbxref=Genbank:WP_002919971.1;Name=WP_002919971.1;Ontology_term=GO:0006880,GO:0004322,GO:0008199;gbkey=CDS;gene=bfr;go_function=ferroxidase activity|0004322||IEA,ferric iron binding|0008199||IEA;go_process=intracellular sequestering of iron ion|0006880||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229172.1;locus_tag=LI478_RS04255;product=bacterioferritin;protein_id=WP_002919971.1;transl_table=11 NZ_CP085478.1 RefSeq gene 835300 835494 . - . ID=gene-LI478_RS04260;Name=bfd;gbkey=Gene;gene=bfd;gene_biotype=protein_coding;locus_tag=LI478_RS04260 NZ_CP085478.1 Protein Homology CDS 835300 835494 . - 0 ID=cds-WP_004152415.1;Parent=gene-LI478_RS04260;Dbxref=Genbank:WP_004152415.1;Name=WP_004152415.1;gbkey=CDS;gene=bfd;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229173.1;locus_tag=LI478_RS04260;product=bacterioferritin-associated ferredoxin;protein_id=WP_004152415.1;transl_table=11 NZ_CP085478.1 RefSeq gene 835675 836859 . - . ID=gene-LI478_RS04265;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=LI478_RS04265 NZ_CP085478.1 Protein Homology CDS 835675 836859 . - 0 ID=cds-WP_004174069.1;Parent=gene-LI478_RS04265;Dbxref=Genbank:WP_004174069.1;Name=WP_004174069.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224494.1;locus_tag=LI478_RS04265;product=elongation factor Tu;protein_id=WP_004174069.1;transl_table=11 NZ_CP085478.1 RefSeq gene 836929 839043 . - . ID=gene-LI478_RS04270;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=LI478_RS04270 NZ_CP085478.1 Protein Homology CDS 836929 839043 . - 0 ID=cds-WP_002920103.1;Parent=gene-LI478_RS04270;Dbxref=Genbank:WP_002920103.1;Name=WP_002920103.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020455498.1;locus_tag=LI478_RS04270;product=elongation factor G;protein_id=WP_002920103.1;transl_table=11 NZ_CP085478.1 RefSeq gene 839140 839610 . - . ID=gene-LI478_RS04275;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=LI478_RS04275 NZ_CP085478.1 Protein Homology CDS 839140 839610 . - 0 ID=cds-WP_002920113.1;Parent=gene-LI478_RS04275;Dbxref=Genbank:WP_002920113.1;Name=WP_002920113.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsG;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742319.1;locus_tag=LI478_RS04275;product=30S ribosomal protein S7;protein_id=WP_002920113.1;transl_table=11 NZ_CP085478.1 RefSeq gene 839707 840081 . - . ID=gene-LI478_RS04280;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=LI478_RS04280 NZ_CP085478.1 Protein Homology CDS 839707 840081 . - 0 ID=cds-WP_002920115.1;Parent=gene-LI478_RS04280;Dbxref=Genbank:WP_002920115.1;Name=WP_002920115.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsL;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005306278.1;locus_tag=LI478_RS04280;product=30S ribosomal protein S12;protein_id=WP_002920115.1;transl_table=11 NZ_CP085478.1 RefSeq gene 840206 840493 . - . ID=gene-LI478_RS04285;Name=tusB;gbkey=Gene;gene=tusB;gene_biotype=protein_coding;locus_tag=LI478_RS04285 NZ_CP085478.1 Protein Homology CDS 840206 840493 . - 0 ID=cds-WP_032415754.1;Parent=gene-LI478_RS04285;Dbxref=Genbank:WP_032415754.1;Name=WP_032415754.1;Ontology_term=GO:0002143;gbkey=CDS;gene=tusB;go_process=tRNA wobble position uridine thiolation|0002143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004202221.1;locus_tag=LI478_RS04285;product=sulfurtransferase complex subunit TusB;protein_id=WP_032415754.1;transl_table=11 NZ_CP085478.1 RefSeq gene 840501 840860 . - . ID=gene-LI478_RS04290;Name=tusC;gbkey=Gene;gene=tusC;gene_biotype=protein_coding;locus_tag=LI478_RS04290 NZ_CP085478.1 Protein Homology CDS 840501 840860 . - 0 ID=cds-WP_004174061.1;Parent=gene-LI478_RS04290;Dbxref=Genbank:WP_004174061.1;Name=WP_004174061.1;gbkey=CDS;gene=tusC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229179.1;locus_tag=LI478_RS04290;product=sulfurtransferase complex subunit TusC;protein_id=WP_004174061.1;transl_table=11 NZ_CP085478.1 RefSeq gene 840860 841246 . - . ID=gene-LI478_RS04295;Name=tusD;gbkey=Gene;gene=tusD;gene_biotype=protein_coding;locus_tag=LI478_RS04295 NZ_CP085478.1 Protein Homology CDS 840860 841246 . - 0 ID=cds-WP_002920128.1;Parent=gene-LI478_RS04295;Dbxref=Genbank:WP_002920128.1;Name=WP_002920128.1;Ontology_term=GO:0008033,GO:0016783;gbkey=CDS;gene=tusD;go_function=sulfurtransferase activity|0016783||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229180.1;locus_tag=LI478_RS04295;product=sulfurtransferase complex subunit TusD;protein_id=WP_002920128.1;transl_table=11 NZ_CP085478.1 RefSeq gene 841246 841968 . - . ID=gene-LI478_RS04300;Name=LI478_RS04300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS04300 NZ_CP085478.1 Protein Homology CDS 841246 841968 . - 0 ID=cds-WP_002920130.1;Parent=gene-LI478_RS04300;Dbxref=Genbank:WP_002920130.1;Name=WP_002920130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229181.1;locus_tag=LI478_RS04300;product=transcriptional regulator;protein_id=WP_002920130.1;transl_table=11 NZ_CP085478.1 RefSeq gene 842137 842967 . - . ID=gene-LI478_RS04305;Name=fkpA;gbkey=Gene;gene=fkpA;gene_biotype=protein_coding;locus_tag=LI478_RS04305 NZ_CP085478.1 Protein Homology CDS 842137 842967 . - 0 ID=cds-WP_004185922.1;Parent=gene-LI478_RS04305;Dbxref=Genbank:WP_004185922.1;Name=WP_004185922.1;Ontology_term=GO:0006457,GO:0003755;gbkey=CDS;gene=fkpA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229182.1;locus_tag=LI478_RS04305;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_004185922.1;transl_table=11 NZ_CP085478.1 RefSeq gene 843190 843408 . + . ID=gene-LI478_RS04310;Name=LI478_RS04310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS04310 NZ_CP085478.1 Protein Homology CDS 843190 843408 . + 0 ID=cds-WP_002920136.1;Parent=gene-LI478_RS04310;Dbxref=Genbank:WP_002920136.1;Name=WP_002920136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229183.1;locus_tag=LI478_RS04310;product=SlyX family protein;protein_id=WP_002920136.1;transl_table=11 NZ_CP085478.1 RefSeq gene 843467 844048 . - . ID=gene-LI478_RS04315;Name=slyD;gbkey=Gene;gene=slyD;gene_biotype=protein_coding;locus_tag=LI478_RS04315 NZ_CP085478.1 Protein Homology CDS 843467 844048 . - 0 ID=cds-WP_064153063.1;Parent=gene-LI478_RS04315;Dbxref=Genbank:WP_064153063.1;Name=WP_064153063.1;Ontology_term=GO:0003755;gbkey=CDS;gene=slyD;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229184.1;locus_tag=LI478_RS04315;product=peptidylprolyl isomerase;protein_id=WP_064153063.1;transl_table=11 NZ_CP085478.1 RefSeq gene 844142 844342 . - . ID=gene-LI478_RS04320;Name=LI478_RS04320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS04320 NZ_CP085478.1 Protein Homology CDS 844142 844342 . - 0 ID=cds-WP_002920143.1;Parent=gene-LI478_RS04320;Dbxref=Genbank:WP_002920143.1;Name=WP_002920143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229185.1;locus_tag=LI478_RS04320;product=YheV family putative metal-binding protein;protein_id=WP_002920143.1;transl_table=11 NZ_CP085478.1 RefSeq gene 844354 846159 . - . ID=gene-LI478_RS04325;Name=kefB;gbkey=Gene;gene=kefB;gene_biotype=protein_coding;locus_tag=LI478_RS04325 NZ_CP085478.1 Protein Homology CDS 844354 846159 . - 0 ID=cds-WP_032415755.1;Parent=gene-LI478_RS04325;Dbxref=Genbank:WP_032415755.1;Name=WP_032415755.1;Ontology_term=GO:0006813,GO:0015503;gbkey=CDS;gene=kefB;go_function=glutathione-regulated potassium exporter activity|0015503||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020455504.1;locus_tag=LI478_RS04325;product=glutathione-regulated potassium-efflux system protein KefB;protein_id=WP_032415755.1;transl_table=11 NZ_CP085478.1 RefSeq gene 846146 846709 . - . ID=gene-LI478_RS04330;Name=kefG;gbkey=Gene;gene=kefG;gene_biotype=protein_coding;locus_tag=LI478_RS04330 NZ_CP085478.1 Protein Homology CDS 846146 846709 . - 0 ID=cds-WP_004151401.1;Parent=gene-LI478_RS04330;Dbxref=Genbank:WP_004151401.1;Name=WP_004151401.1;Ontology_term=GO:0006813;gbkey=CDS;gene=kefG;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229187.1;locus_tag=LI478_RS04330;product=glutathione-regulated potassium-efflux system ancillary protein KefG;protein_id=WP_004151401.1;transl_table=11 NZ_CP085478.1 RefSeq gene 846883 848787 . + . ID=gene-LI478_RS04335;Name=LI478_RS04335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS04335 NZ_CP085478.1 Protein Homology CDS 846883 848787 . + 0 ID=cds-WP_004174057.1;Parent=gene-LI478_RS04335;Dbxref=Genbank:WP_004174057.1;Name=WP_004174057.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229188.1;locus_tag=LI478_RS04335;product=ABC transporter ATP-binding protein;protein_id=WP_004174057.1;transl_table=11 NZ_CP085478.1 RefSeq gene 849054 850013 . + . ID=gene-LI478_RS04340;Name=LI478_RS04340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS04340 NZ_CP085478.1 Protein Homology CDS 849054 850013 . + 0 ID=cds-WP_173016171.1;Parent=gene-LI478_RS04340;Dbxref=Genbank:WP_173016171.1;Name=WP_173016171.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012967146.1;locus_tag=LI478_RS04340;product=hydrolase;protein_id=WP_173016171.1;transl_table=11 NZ_CP085478.1 RefSeq gene 850010 850228 . + . ID=gene-LI478_RS04345;Name=LI478_RS04345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS04345 NZ_CP085478.1 Protein Homology CDS 850010 850228 . + 0 ID=cds-WP_002920151.1;Parent=gene-LI478_RS04345;Dbxref=Genbank:WP_002920151.1;Name=WP_002920151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229191.1;locus_tag=LI478_RS04345;product=YheU family protein;protein_id=WP_002920151.1;transl_table=11 NZ_CP085478.1 RefSeq gene 850265 851134 . + . ID=gene-LI478_RS04350;Name=LI478_RS04350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS04350 NZ_CP085478.1 Protein Homology CDS 850265 851134 . + 0 ID=cds-WP_002920153.1;Parent=gene-LI478_RS04350;Dbxref=Genbank:WP_002920153.1;Name=WP_002920153.1;Ontology_term=GO:0005975,GO:0005524,GO:0008974;gbkey=CDS;go_function=ATP binding|0005524||IEA,phosphoribulokinase activity|0008974||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229192.1;locus_tag=LI478_RS04350;product=phosphoribulokinase;protein_id=WP_002920153.1;transl_table=11 NZ_CP085478.1 RefSeq gene 851189 851593 . - . ID=gene-LI478_RS04355;Name=LI478_RS04355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS04355 NZ_CP085478.1 Protein Homology CDS 851189 851593 . - 0 ID=cds-WP_002920158.1;Parent=gene-LI478_RS04355;Dbxref=Genbank:WP_002920158.1;Name=WP_002920158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002920158.1;locus_tag=LI478_RS04355;product=OsmC family protein;protein_id=WP_002920158.1;transl_table=11 NZ_CP085478.1 RefSeq gene 851900 852532 . + . ID=gene-LI478_RS04360;Name=crp;gbkey=Gene;gene=crp;gene_biotype=protein_coding;locus_tag=LI478_RS04360 NZ_CP085478.1 Protein Homology CDS 851900 852532 . + 0 ID=cds-WP_000242758.1;Parent=gene-LI478_RS04360;Dbxref=Genbank:WP_000242758.1;Name=WP_000242758.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=crp;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506431.1;locus_tag=LI478_RS04360;product=cAMP-activated global transcriptional regulator CRP;protein_id=WP_000242758.1;transl_table=11 NZ_CP085478.1 RefSeq gene 852584 854662 . + . ID=gene-LI478_RS04365;Name=LI478_RS04365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS04365 NZ_CP085478.1 Protein Homology CDS 852584 854662 . + 0 ID=cds-WP_020323923.1;Parent=gene-LI478_RS04365;Dbxref=Genbank:WP_020323923.1;Name=WP_020323923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229195.1;locus_tag=LI478_RS04365;product=YccS/YhfK family putative transporter;protein_id=WP_020323923.1;transl_table=11 NZ_CP085478.1 RefSeq gene 854652 855872 . - . ID=gene-LI478_RS04370;Name=LI478_RS04370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS04370 NZ_CP085478.1 Protein Homology CDS 854652 855872 . - 0 ID=cds-WP_004174049.1;Parent=gene-LI478_RS04370;Dbxref=Genbank:WP_004174049.1;Name=WP_004174049.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229196.1;locus_tag=LI478_RS04370;product=aspartate aminotransferase family protein;protein_id=WP_004174049.1;transl_table=11 NZ_CP085478.1 RefSeq gene 855963 856526 . - . ID=gene-LI478_RS04375;Name=pabA;gbkey=Gene;gene=pabA;gene_biotype=protein_coding;locus_tag=LI478_RS04375 NZ_CP085478.1 Protein Homology CDS 855963 856526 . - 0 ID=cds-WP_002920229.1;Parent=gene-LI478_RS04375;Dbxref=Genbank:WP_002920229.1;Name=WP_002920229.1;gbkey=CDS;gene=pabA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229197.1;locus_tag=LI478_RS04375;product=aminodeoxychorismate synthase component 2;protein_id=WP_002920229.1;transl_table=11 NZ_CP085478.1 RefSeq gene 856559 857161 . - . ID=gene-LI478_RS04380;Name=LI478_RS04380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS04380 NZ_CP085478.1 Protein Homology CDS 856559 857161 . - 0 ID=cds-WP_004181446.1;Parent=gene-LI478_RS04380;Dbxref=Genbank:WP_004181446.1;Name=WP_004181446.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229198.1;locus_tag=LI478_RS04380;product=putative adenosine monophosphate-protein transferase Fic;protein_id=WP_004181446.1;transl_table=11 NZ_CP085478.1 RefSeq gene 857151 857318 . - . ID=gene-LI478_RS04385;Name=LI478_RS04385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS04385 NZ_CP085478.1 Protein Homology CDS 857151 857318 . - 0 ID=cds-WP_002920231.1;Parent=gene-LI478_RS04385;Dbxref=Genbank:WP_002920231.1;Name=WP_002920231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229199.1;locus_tag=LI478_RS04385;product=YhfG family protein;protein_id=WP_002920231.1;transl_table=11 NZ_CP085478.1 RefSeq gene 857425 857994 . - . ID=gene-LI478_RS04390;Name=ppiA;gbkey=Gene;gene=ppiA;gene_biotype=protein_coding;gene_synonym=rotA;locus_tag=LI478_RS04390 NZ_CP085478.1 Protein Homology CDS 857425 857994 . - 0 ID=cds-WP_002920238.1;Parent=gene-LI478_RS04390;Dbxref=Genbank:WP_002920238.1;Name=WP_002920238.1;gbkey=CDS;gene=ppiA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229200.1;locus_tag=LI478_RS04390;product=peptidylprolyl isomerase A;protein_id=WP_002920238.1;transl_table=11 NZ_CP085478.1 RefSeq gene 858271 859458 . + . ID=gene-LI478_RS04395;Name=tsgA;gbkey=Gene;gene=tsgA;gene_biotype=protein_coding;locus_tag=LI478_RS04395 NZ_CP085478.1 Protein Homology CDS 858271 859458 . + 0 ID=cds-WP_032415757.1;Parent=gene-LI478_RS04395;Dbxref=Genbank:WP_032415757.1;Name=WP_032415757.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=tsgA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229201.1;locus_tag=LI478_RS04395;product=MFS transporter TsgA;protein_id=WP_032415757.1;transl_table=11 NZ_CP085478.1 RefSeq gene 859455 860777 . - . ID=gene-LI478_RS04400;Name=LI478_RS04400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS04400 NZ_CP085478.1 Protein Homology CDS 859455 860777 . - 0 ID=cds-WP_009308722.1;Parent=gene-LI478_RS04400;Dbxref=Genbank:WP_009308722.1;Name=WP_009308722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229202.1;locus_tag=LI478_RS04400;product=cytosine deaminase;protein_id=WP_009308722.1;transl_table=11 NZ_CP085478.1 RefSeq gene 861016 863559 . + . ID=gene-LI478_RS04405;Name=nirB;gbkey=Gene;gene=nirB;gene_biotype=protein_coding;locus_tag=LI478_RS04405 NZ_CP085478.1 Protein Homology CDS 861016 863559 . + 0 ID=cds-WP_002920243.1;Parent=gene-LI478_RS04405;Dbxref=Genbank:WP_002920243.1;Name=WP_002920243.1;Ontology_term=GO:0042128,GO:0008942,GO:0016491,GO:0050660,GO:0050661;gbkey=CDS;gene=nirB;go_function=nitrite reductase [NAD(P)H] activity|0008942||IEA,oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;go_process=nitrate assimilation|0042128||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229204.1;locus_tag=LI478_RS04405;product=nitrite reductase large subunit NirB;protein_id=WP_002920243.1;transl_table=11 NZ_CP085478.1 RefSeq gene 863556 863882 . + . ID=gene-LI478_RS04410;Name=nirD;gbkey=Gene;gene=nirD;gene_biotype=protein_coding;locus_tag=LI478_RS04410 NZ_CP085478.1 Protein Homology CDS 863556 863882 . + 0 ID=cds-WP_002920249.1;Parent=gene-LI478_RS04410;Dbxref=Genbank:WP_002920249.1;Name=WP_002920249.1;gbkey=CDS;gene=nirD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229205.1;locus_tag=LI478_RS04410;product=nitrite reductase small subunit NirD;protein_id=WP_002920249.1;transl_table=11 NZ_CP085478.1 RefSeq gene 864036 865409 . + . ID=gene-LI478_RS04415;Name=cysG;gbkey=Gene;gene=cysG;gene_biotype=protein_coding;locus_tag=LI478_RS04415 NZ_CP085478.1 Protein Homology CDS 864036 865409 . + 0 ID=cds-WP_002920252.1;Parent=gene-LI478_RS04415;Dbxref=Genbank:WP_002920252.1;Name=WP_002920252.1;Ontology_term=GO:0019354,GO:0004851,GO:0043115,GO:0051266,GO:0051287;gbkey=CDS;gene=cysG;go_function=uroporphyrin-III C-methyltransferase activity|0004851||IEA,precorrin-2 dehydrogenase activity|0043115||IEA,sirohydrochlorin ferrochelatase activity|0051266||IEA,NAD binding|0051287||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229206.1;locus_tag=LI478_RS04415;product=siroheme synthase CysG;protein_id=WP_002920252.1;transl_table=11 NZ_CP085478.1 RefSeq gene 865482 866486 . - . ID=gene-LI478_RS04420;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=LI478_RS04420 NZ_CP085478.1 Protein Homology CDS 865482 866486 . - 0 ID=cds-WP_002920253.1;Parent=gene-LI478_RS04420;Dbxref=Genbank:WP_002920253.1;Name=WP_002920253.1;Ontology_term=GO:0006436,GO:0004830,GO:0005737;gbkey=CDS;gene=trpS;go_component=cytoplasm|0005737||IEA;go_function=tryptophan-tRNA ligase activity|0004830||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229207.1;locus_tag=LI478_RS04420;product=tryptophan--tRNA ligase;protein_id=WP_002920253.1;transl_table=11 NZ_CP085478.1 RefSeq gene 866479 867240 . - . ID=gene-LI478_RS04425;Name=gph;gbkey=Gene;gene=gph;gene_biotype=protein_coding;locus_tag=LI478_RS04425 NZ_CP085478.1 Protein Homology CDS 866479 867240 . - 0 ID=cds-WP_004188345.1;Parent=gene-LI478_RS04425;Dbxref=Genbank:WP_004188345.1;Name=WP_004188345.1;Ontology_term=GO:0005975,GO:0008967;gbkey=CDS;gene=gph;go_function=phosphoglycolate phosphatase activity|0008967||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229208.1;locus_tag=LI478_RS04425;product=phosphoglycolate phosphatase;protein_id=WP_004188345.1;transl_table=11 NZ_CP085478.1 RefSeq gene 867233 867910 . - . ID=gene-LI478_RS04430;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=LI478_RS04430 NZ_CP085478.1 Protein Homology CDS 867233 867910 . - 0 ID=cds-WP_002920259.1;Parent=gene-LI478_RS04430;Dbxref=Genbank:WP_002920259.1;Name=WP_002920259.1;Ontology_term=GO:0006098,GO:0004750;gbkey=CDS;gene=rpe;go_function=D-ribulose-phosphate 3-epimerase activity|0004750||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229209.1;locus_tag=LI478_RS04430;product=ribulose-phosphate 3-epimerase;protein_id=WP_002920259.1;transl_table=11 NZ_CP085478.1 RefSeq gene 867928 868755 . - . ID=gene-LI478_RS04435;Name=dam;gbkey=Gene;gene=dam;gene_biotype=protein_coding;locus_tag=LI478_RS04435 NZ_CP085478.1 Protein Homology CDS 867928 868755 . - 0 ID=cds-WP_002920260.1;Parent=gene-LI478_RS04435;Dbxref=Genbank:WP_002920260.1;Name=WP_002920260.1;Ontology_term=GO:0032775,GO:0003676,GO:0009007;gbkey=CDS;gene=dam;go_function=nucleic acid binding|0003676||IEA,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;go_process=DNA methylation on adenine|0032775||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229210.1;locus_tag=LI478_RS04435;product=adenine-specific DNA-methyltransferase;protein_id=WP_002920260.1;transl_table=11 NZ_CP085478.1 RefSeq gene 868834 870120 . - . ID=gene-LI478_RS04440;Name=damX;gbkey=Gene;gene=damX;gene_biotype=protein_coding;locus_tag=LI478_RS04440 NZ_CP085478.1 Protein Homology CDS 868834 870120 . - 0 ID=cds-WP_064153061.1;Parent=gene-LI478_RS04440;Dbxref=Genbank:WP_064153061.1;Name=WP_064153061.1;Ontology_term=GO:0032506,GO:0042834;gbkey=CDS;gene=damX;go_function=peptidoglycan binding|0042834||IEA;go_process=cytokinetic process|0032506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229211.1;locus_tag=LI478_RS04440;product=cell division protein DamX;protein_id=WP_064153061.1;transl_table=11 NZ_CP085478.1 RefSeq gene 870205 871299 . - . ID=gene-LI478_RS04445;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=LI478_RS04445 NZ_CP085478.1 Protein Homology CDS 870205 871299 . - 0 ID=cds-WP_002920264.1;Parent=gene-LI478_RS04445;Dbxref=Genbank:WP_002920264.1;Name=WP_002920264.1;Ontology_term=GO:0009423,GO:0003856;gbkey=CDS;gene=aroB;go_function=3-dehydroquinate synthase activity|0003856||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017145321.1;locus_tag=LI478_RS04445;product=3-dehydroquinate synthase;protein_id=WP_002920264.1;transl_table=11 NZ_CP085478.1 RefSeq gene 871355 871876 . - . ID=gene-LI478_RS04450;Name=aroK;gbkey=Gene;gene=aroK;gene_biotype=protein_coding;locus_tag=LI478_RS04450 NZ_CP085478.1 Protein Homology CDS 871355 871876 . - 0 ID=cds-WP_002920267.1;Parent=gene-LI478_RS04450;Dbxref=Genbank:WP_002920267.1;Name=WP_002920267.1;gbkey=CDS;gene=aroK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004709337.1;locus_tag=LI478_RS04450;product=shikimate kinase AroK;protein_id=WP_002920267.1;transl_table=11 NZ_CP085478.1 RefSeq gene 872147 873391 . - . ID=gene-LI478_RS04455;Name=hofQ;gbkey=Gene;gene=hofQ;gene_biotype=protein_coding;locus_tag=LI478_RS04455 NZ_CP085478.1 Protein Homology CDS 872147 873391 . - 0 ID=cds-WP_004174030.1;Parent=gene-LI478_RS04455;Dbxref=Genbank:WP_004174030.1;Name=WP_004174030.1;Ontology_term=GO:0009306,GO:0019867;gbkey=CDS;gene=hofQ;go_component=outer membrane|0019867||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229214.1;locus_tag=LI478_RS04455;product=DNA uptake porin HofQ;protein_id=WP_004174030.1;transl_table=11 NZ_CP085478.1 RefSeq gene 873324 873707 . - . ID=gene-LI478_RS04460;Name=LI478_RS04460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS04460 NZ_CP085478.1 Protein Homology CDS 873324 873707 . - 0 ID=cds-WP_004889465.1;Parent=gene-LI478_RS04460;Dbxref=Genbank:WP_004889465.1;Name=WP_004889465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004889465.1;locus_tag=LI478_RS04460;product=HofP DNA utilization family protein;protein_id=WP_004889465.1;transl_table=11 NZ_CP085478.1 RefSeq gene 873697 874125 . - . ID=gene-LI478_RS04465;Name=LI478_RS04465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS04465 NZ_CP085478.1 Protein Homology CDS 873697 874125 . - 0 ID=cds-WP_004151403.1;Parent=gene-LI478_RS04465;Dbxref=Genbank:WP_004151403.1;Name=WP_004151403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229215.1;locus_tag=LI478_RS04465;product=hypothetical protein;protein_id=WP_004151403.1;transl_table=11 NZ_CP085478.1 RefSeq gene 874115 874648 . - . ID=gene-LI478_RS04470;Name=LI478_RS04470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS04470 NZ_CP085478.1 Protein Homology CDS 874115 874648 . - 0 ID=cds-WP_032415759.1;Parent=gene-LI478_RS04470;Dbxref=Genbank:WP_032415759.1;Name=WP_032415759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229216.1;locus_tag=LI478_RS04470;product=pilus assembly protein PilN;protein_id=WP_032415759.1;transl_table=11 NZ_CP085478.1 RefSeq gene 874632 875432 . - . ID=gene-LI478_RS04475;Name=LI478_RS04475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS04475 NZ_CP085478.1 Protein Homology CDS 874632 875432 . - 0 ID=cds-WP_032415760.1;Parent=gene-LI478_RS04475;Dbxref=Genbank:WP_032415760.1;Name=WP_032415760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229217.1;locus_tag=LI478_RS04475;product=hypothetical protein;protein_id=WP_032415760.1;transl_table=11 NZ_CP085478.1 RefSeq gene 875551 878109 . + . ID=gene-LI478_RS04480;Name=mrcA;gbkey=Gene;gene=mrcA;gene_biotype=protein_coding;locus_tag=LI478_RS04480 NZ_CP085478.1 Protein Homology CDS 875551 878109 . + 0 ID=cds-WP_032415761.1;Parent=gene-LI478_RS04480;Dbxref=Genbank:WP_032415761.1;Name=WP_032415761.1;Ontology_term=GO:0008658;gbkey=CDS;gene=mrcA;go_function=penicillin binding|0008658||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312265.2;locus_tag=LI478_RS04480;product=peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA;protein_id=WP_032415761.1;transl_table=11 NZ_CP085478.1 RefSeq gene 878163 878723 . - . ID=gene-LI478_RS04485;Name=nudE;gbkey=Gene;gene=nudE;gene_biotype=protein_coding;locus_tag=LI478_RS04485 NZ_CP085478.1 Protein Homology CDS 878163 878723 . - 0 ID=cds-WP_002920321.1;Parent=gene-LI478_RS04485;Dbxref=Genbank:WP_002920321.1;Name=WP_002920321.1;Ontology_term=GO:0016787;gbkey=CDS;gene=nudE;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312266.1;locus_tag=LI478_RS04485;product=ADP compounds hydrolase NudE;protein_id=WP_002920321.1;transl_table=11 NZ_CP085478.1 RefSeq gene 879044 881173 . + . ID=gene-LI478_RS04490;Name=LI478_RS04490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS04490 NZ_CP085478.1 Protein Homology CDS 879044 881173 . + 0 ID=cds-WP_004174025.1;Parent=gene-LI478_RS04490;Dbxref=Genbank:WP_004174025.1;Name=WP_004174025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229220.1;locus_tag=LI478_RS04490;product=intracellular growth attenuator family protein;protein_id=WP_004174025.1;transl_table=11 NZ_CP085478.1 RefSeq gene 881234 881917 . + . ID=gene-LI478_RS04495;Name=yrfG;gbkey=Gene;gene=yrfG;gene_biotype=protein_coding;locus_tag=LI478_RS04495 NZ_CP085478.1 Protein Homology CDS 881234 881917 . + 0 ID=cds-WP_004181456.1;Parent=gene-LI478_RS04495;Dbxref=Genbank:WP_004181456.1;Name=WP_004181456.1;gbkey=CDS;gene=yrfG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229221.1;locus_tag=LI478_RS04495;product=GMP/IMP nucleotidase;protein_id=WP_004181456.1;transl_table=11 NZ_CP085478.1 RefSeq gene 881914 882315 . + . ID=gene-LI478_RS04500;Name=hslR;gbkey=Gene;gene=hslR;gene_biotype=protein_coding;locus_tag=LI478_RS04500 NZ_CP085478.1 Protein Homology CDS 881914 882315 . + 0 ID=cds-WP_004188326.1;Parent=gene-LI478_RS04500;Dbxref=Genbank:WP_004188326.1;Name=WP_004188326.1;gbkey=CDS;gene=hslR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229222.1;locus_tag=LI478_RS04500;product=ribosome-associated heat shock protein Hsp15;protein_id=WP_004188326.1;transl_table=11 NZ_CP085478.1 RefSeq gene 882334 883218 . + . ID=gene-LI478_RS04505;Name=hslO;gbkey=Gene;gene=hslO;gene_biotype=protein_coding;locus_tag=LI478_RS04505 NZ_CP085478.1 Protein Homology CDS 882334 883218 . + 0 ID=cds-WP_004188324.1;Parent=gene-LI478_RS04505;Dbxref=Genbank:WP_004188324.1;Name=WP_004188324.1;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=hslO;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229223.1;locus_tag=LI478_RS04505;product=Hsp33 family molecular chaperone HslO;protein_id=WP_004188324.1;transl_table=11 NZ_CP085478.1 RefSeq gene 883579 885201 . + . ID=gene-LI478_RS04510;Name=pckA;gbkey=Gene;gene=pckA;gene_biotype=protein_coding;locus_tag=LI478_RS04510 NZ_CP085478.1 Protein Homology CDS 883579 885201 . + 0 ID=cds-WP_040237615.1;Parent=gene-LI478_RS04510;Dbxref=Genbank:WP_040237615.1;Name=WP_040237615.1;Ontology_term=GO:0006094,GO:0004612;gbkey=CDS;gene=pckA;go_function=phosphoenolpyruvate carboxykinase (ATP) activity|0004612||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229225.1;locus_tag=LI478_RS04510;product=phosphoenolpyruvate carboxykinase (ATP);protein_id=WP_040237615.1;transl_table=11 NZ_CP085478.1 RefSeq gene 885279 886634 . - . ID=gene-LI478_RS04515;Name=envZ;gbkey=Gene;gene=envZ;gene_biotype=protein_coding;locus_tag=LI478_RS04515 NZ_CP085478.1 Protein Homology CDS 885279 886634 . - 0 ID=cds-WP_002920333.1;Parent=gene-LI478_RS04515;Dbxref=Genbank:WP_002920333.1;Name=WP_002920333.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=envZ;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229226.1;locus_tag=LI478_RS04515;product=two-component system sensor histidine kinase EnvZ;protein_id=WP_002920333.1;transl_table=11 NZ_CP085478.1 RefSeq gene 886631 887350 . - . ID=gene-LI478_RS04520;Name=ompR;gbkey=Gene;gene=ompR;gene_biotype=protein_coding;locus_tag=LI478_RS04520 NZ_CP085478.1 Protein Homology CDS 886631 887350 . - 0 ID=cds-WP_001157751.1;Parent=gene-LI478_RS04520;Dbxref=Genbank:WP_001157751.1;Name=WP_001157751.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=ompR;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014646135.1;locus_tag=LI478_RS04520;product=two-component system response regulator OmpR;protein_id=WP_001157751.1;transl_table=11 NZ_CP085478.1 RefSeq gene 887578 888051 . + . ID=gene-LI478_RS04525;Name=greB;gbkey=Gene;gene=greB;gene_biotype=protein_coding;locus_tag=LI478_RS04525 NZ_CP085478.1 Protein Homology CDS 887578 888051 . + 0 ID=cds-WP_002920503.1;Parent=gene-LI478_RS04525;Dbxref=Genbank:WP_002920503.1;Name=WP_002920503.1;Ontology_term=GO:0006354,GO:0003711;gbkey=CDS;gene=greB;go_function=transcription elongation factor activity|0003711||IEA;go_process=DNA-templated transcription elongation|0006354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015703675.1;locus_tag=LI478_RS04525;product=transcription elongation factor GreB;protein_id=WP_002920503.1;transl_table=11 NZ_CP085478.1 RefSeq gene 888152 890482 . + . ID=gene-LI478_RS04530;Name=LI478_RS04530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS04530 NZ_CP085478.1 Protein Homology CDS 888152 890482 . + 0 ID=cds-WP_064153060.1;Parent=gene-LI478_RS04530;Dbxref=Genbank:WP_064153060.1;Name=WP_064153060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229229.1;locus_tag=LI478_RS04530;product=Tex family protein;protein_id=WP_064153060.1;transl_table=11 NZ_CP085478.1 RefSeq gene 890895 891122 . + . ID=gene-LI478_RS04535;Name=feoA;gbkey=Gene;gene=feoA;gene_biotype=protein_coding;locus_tag=LI478_RS04535 NZ_CP085478.1 Protein Homology CDS 890895 891122 . + 0 ID=cds-WP_002920506.1;Parent=gene-LI478_RS04535;Dbxref=Genbank:WP_002920506.1;Name=WP_002920506.1;gbkey=CDS;gene=feoA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004126281.1;locus_tag=LI478_RS04535;product=ferrous iron transporter A;protein_id=WP_002920506.1;transl_table=11 NZ_CP085478.1 RefSeq gene 891151 893469 . + . ID=gene-LI478_RS04540;Name=feoB;gbkey=Gene;gene=feoB;gene_biotype=protein_coding;locus_tag=LI478_RS04540 NZ_CP085478.1 Protein Homology CDS 891151 893469 . + 0 ID=cds-WP_048975776.1;Parent=gene-LI478_RS04540;Dbxref=Genbank:WP_048975776.1;Name=WP_048975776.1;Ontology_term=GO:0006826,GO:0005525,GO:0015093,GO:0016020;gbkey=CDS;gene=feoB;go_component=membrane|0016020||IEA;go_function=GTP binding|0005525||IEA,ferrous iron transmembrane transporter activity|0015093||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229231.1;locus_tag=LI478_RS04540;product=Fe(2+) transporter permease subunit FeoB;protein_id=WP_048975776.1;transl_table=11 NZ_CP085478.1 RefSeq gene 893479 893718 . + . ID=gene-LI478_RS04545;Name=feoC;gbkey=Gene;gene=feoC;gene_biotype=protein_coding;locus_tag=LI478_RS04545 NZ_CP085478.1 Protein Homology CDS 893479 893718 . + 0 ID=cds-WP_002920509.1;Parent=gene-LI478_RS04545;Dbxref=Genbank:WP_002920509.1;Name=WP_002920509.1;gbkey=CDS;gene=feoC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229232.1;locus_tag=LI478_RS04545;product=[Fe-S]-dependent transcriptional repressor FeoC;protein_id=WP_002920509.1;transl_table=11 NZ_CP085478.1 RefSeq gene 893807 894076 . - . ID=gene-LI478_RS04550;Name=LI478_RS04550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS04550 NZ_CP085478.1 Protein Homology CDS 893807 894076 . - 0 ID=cds-WP_002920510.1;Parent=gene-LI478_RS04550;Dbxref=Genbank:WP_002920510.1;Name=WP_002920510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229233.1;locus_tag=LI478_RS04550;product=DUF1471 domain-containing protein;protein_id=WP_002920510.1;transl_table=11 NZ_CP085478.1 RefSeq gene 894197 894970 . - . ID=gene-LI478_RS04555;Name=bioH;gbkey=Gene;gene=bioH;gene_biotype=protein_coding;locus_tag=LI478_RS04555 NZ_CP085478.1 Protein Homology CDS 894197 894970 . - 0 ID=cds-WP_004174021.1;Parent=gene-LI478_RS04555;Dbxref=Genbank:WP_004174021.1;Name=WP_004174021.1;Ontology_term=GO:0052689;gbkey=CDS;gene=bioH;go_function=carboxylic ester hydrolase activity|0052689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008807001.1;locus_tag=LI478_RS04555;product=pimeloyl-ACP methyl ester esterase BioH;protein_id=WP_004174021.1;transl_table=11 NZ_CP085478.1 RefSeq gene 895009 895683 . + . ID=gene-LI478_RS04560;Name=gntX;gbkey=Gene;gene=gntX;gene_biotype=protein_coding;locus_tag=LI478_RS04560 NZ_CP085478.1 Protein Homology CDS 895009 895683 . + 0 ID=cds-WP_023317327.1;Parent=gene-LI478_RS04560;Dbxref=Genbank:WP_023317327.1;Name=WP_023317327.1;Ontology_term=GO:0009116;gbkey=CDS;gene=gntX;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000958738.1;locus_tag=LI478_RS04560;product=DNA utilization protein GntX;protein_id=WP_023317327.1;transl_table=11 NZ_CP085478.1 RefSeq gene 895742 896317 . + . ID=gene-LI478_RS04565;Name=nfuA;gbkey=Gene;gene=nfuA;gene_biotype=protein_coding;locus_tag=LI478_RS04565 NZ_CP085478.1 Protein Homology CDS 895742 896317 . + 0 ID=cds-WP_002920540.1;Parent=gene-LI478_RS04565;Dbxref=Genbank:WP_002920540.1;Name=WP_002920540.1;Ontology_term=GO:0016226,GO:0051604,GO:0051539;gbkey=CDS;gene=nfuA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA,protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016942932.1;locus_tag=LI478_RS04565;product=Fe-S biogenesis protein NfuA;protein_id=WP_002920540.1;transl_table=11 NZ_CP085478.1 RefSeq gene 896654 897970 . + . ID=gene-LI478_RS04570;Name=gntT;gbkey=Gene;gene=gntT;gene_biotype=protein_coding;locus_tag=LI478_RS04570 NZ_CP085478.1 Protein Homology CDS 896654 897970 . + 0 ID=cds-WP_002920542.1;Parent=gene-LI478_RS04570;Dbxref=Genbank:WP_002920542.1;Name=WP_002920542.1;gbkey=CDS;gene=gntT;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229237.1;locus_tag=LI478_RS04570;product=gluconate transporter;protein_id=WP_002920542.1;transl_table=11 NZ_CP085478.1 RefSeq gene 898073 900166 . - . ID=gene-LI478_RS04575;Name=malQ;gbkey=Gene;gene=malQ;gene_biotype=protein_coding;locus_tag=LI478_RS04575 NZ_CP085478.1 Protein Homology CDS 898073 900166 . - 0 ID=cds-WP_004185965.1;Parent=gene-LI478_RS04575;Dbxref=Genbank:WP_004185965.1;Name=WP_004185965.1;Ontology_term=GO:0005975,GO:0004134;gbkey=CDS;gene=malQ;go_function=4-alpha-glucanotransferase activity|0004134||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229238.1;locus_tag=LI478_RS04575;product=4-alpha-glucanotransferase;protein_id=WP_004185965.1;transl_table=11 NZ_CP085478.1 RefSeq gene 900177 902567 . - . ID=gene-LI478_RS04580;Name=malP;gbkey=Gene;gene=malP;gene_biotype=protein_coding;locus_tag=LI478_RS04580 NZ_CP085478.1 Protein Homology CDS 900177 902567 . - 0 ID=cds-WP_032415765.1;Parent=gene-LI478_RS04580;Dbxref=Genbank:WP_032415765.1;Name=WP_032415765.1;Ontology_term=GO:0005975,GO:0008184,GO:0030170;gbkey=CDS;gene=malP;go_function=glycogen phosphorylase activity|0008184||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229239.1;locus_tag=LI478_RS04580;product=maltodextrin phosphorylase;protein_id=WP_032415765.1;transl_table=11 NZ_CP085478.1 RefSeq gene 903192 905897 . + . ID=gene-LI478_RS04585;Name=malT;gbkey=Gene;gene=malT;gene_biotype=protein_coding;locus_tag=LI478_RS04585 NZ_CP085478.1 Protein Homology CDS 903192 905897 . + 0 ID=cds-WP_016529568.1;Parent=gene-LI478_RS04585;Dbxref=Genbank:WP_016529568.1;Name=WP_016529568.1;Ontology_term=GO:0006355,GO:0003677,GO:0005515;gbkey=CDS;gene=malT;go_function=DNA binding|0003677||IEA,protein binding|0005515||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000907024.1;locus_tag=LI478_RS04585;product=HTH-type transcriptional regulator MalT;protein_id=WP_016529568.1;transl_table=11 NZ_CP085478.1 RefSeq gene 905913 906671 . - . ID=gene-LI478_RS04590;Name=LI478_RS04590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS04590 NZ_CP085478.1 Protein Homology CDS 905913 906671 . - 0 ID=cds-WP_002920548.1;Parent=gene-LI478_RS04590;Dbxref=Genbank:WP_002920548.1;Name=WP_002920548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000815090.1;locus_tag=LI478_RS04590;product=DeoR/GlpR family transcriptional regulator;protein_id=WP_002920548.1;transl_table=11 NZ_CP085478.1 RefSeq gene 906721 907551 . - . ID=gene-LI478_RS04595;Name=glpG;gbkey=Gene;gene=glpG;gene_biotype=protein_coding;locus_tag=LI478_RS04595 NZ_CP085478.1 Protein Homology CDS 906721 907551 . - 0 ID=cds-WP_004151408.1;Parent=gene-LI478_RS04595;Dbxref=Genbank:WP_004151408.1;Name=WP_004151408.1;Ontology_term=GO:0006508,GO:0004252,GO:0016020;gbkey=CDS;gene=glpG;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229242.1;locus_tag=LI478_RS04595;product=rhomboid family intramembrane serine protease GlpG;protein_id=WP_004151408.1;transl_table=11 NZ_CP085478.1 RefSeq gene 907602 907931 . - . ID=gene-LI478_RS04600;Name=glpE;gbkey=Gene;gene=glpE;gene_biotype=protein_coding;locus_tag=LI478_RS04600 NZ_CP085478.1 Protein Homology CDS 907602 907931 . - 0 ID=cds-WP_002920552.1;Parent=gene-LI478_RS04600;Dbxref=Genbank:WP_002920552.1;Name=WP_002920552.1;Ontology_term=GO:0004792;gbkey=CDS;gene=glpE;go_function=thiosulfate sulfurtransferase activity|0004792||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229243.1;locus_tag=LI478_RS04600;product=thiosulfate sulfurtransferase GlpE;protein_id=WP_002920552.1;transl_table=11 NZ_CP085478.1 RefSeq gene 908136 909644 . + . ID=gene-LI478_RS04605;Name=glpD;gbkey=Gene;gene=glpD;gene_biotype=protein_coding;locus_tag=LI478_RS04605 NZ_CP085478.1 Protein Homology CDS 908136 909644 . + 0 ID=cds-WP_002920554.1;Parent=gene-LI478_RS04605;Dbxref=Genbank:WP_002920554.1;Name=WP_002920554.1;Ontology_term=GO:0006072,GO:0004368,GO:0009331;gbkey=CDS;gene=glpD;go_component=glycerol-3-phosphate dehydrogenase complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229244.1;locus_tag=LI478_RS04605;product=glycerol-3-phosphate dehydrogenase;protein_id=WP_002920554.1;transl_table=11 NZ_CP085478.1 RefSeq gene 909707 910006 . - . ID=gene-LI478_RS04610;Name=LI478_RS04610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS04610 NZ_CP085478.1 Protein Homology CDS 909707 910006 . - 0 ID=cds-WP_002920557.1;Parent=gene-LI478_RS04610;Dbxref=Genbank:WP_002920557.1;Name=WP_002920557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008806992.1;locus_tag=LI478_RS04610;product=helix-turn-helix transcriptional regulator;protein_id=WP_002920557.1;transl_table=11 NZ_CP085478.1 RefSeq gene 910006 910353 . - . ID=gene-LI478_RS04615;Name=LI478_RS04615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS04615 NZ_CP085478.1 Protein Homology CDS 910006 910353 . - 0 ID=cds-WP_016529833.1;Parent=gene-LI478_RS04615;Dbxref=Genbank:WP_016529833.1;Name=WP_016529833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002920560.1;locus_tag=LI478_RS04615;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_016529833.1;transl_table=11 NZ_CP085478.1 RefSeq gene 910529 912976 . - . ID=gene-LI478_RS04620;Name=glgP;gbkey=Gene;gene=glgP;gene_biotype=protein_coding;locus_tag=LI478_RS04620 NZ_CP085478.1 Protein Homology CDS 910529 912976 . - 0 ID=cds-WP_021312822.1;Parent=gene-LI478_RS04620;Dbxref=Genbank:WP_021312822.1;Name=WP_021312822.1;Ontology_term=GO:0005975,GO:0008184;gbkey=CDS;gene=glgP;go_function=glycogen phosphorylase activity|0008184||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229246.1;locus_tag=LI478_RS04620;product=glycogen phosphorylase;protein_id=WP_021312822.1;transl_table=11 NZ_CP085478.1 RefSeq gene 912994 914427 . - . ID=gene-LI478_RS04625;Name=glgA;gbkey=Gene;gene=glgA;gene_biotype=protein_coding;locus_tag=LI478_RS04625 NZ_CP085478.1 Protein Homology CDS 912994 914427 . - 0 ID=cds-WP_002920564.1;Parent=gene-LI478_RS04625;Dbxref=Genbank:WP_002920564.1;Name=WP_002920564.1;Ontology_term=GO:0004373;gbkey=CDS;gene=glgA;go_function=glycogen (starch) synthase activity|0004373||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229247.1;locus_tag=LI478_RS04625;product=glycogen synthase GlgA;protein_id=WP_002920564.1;transl_table=11 NZ_CP085478.1 RefSeq gene 914427 915722 . - . ID=gene-LI478_RS04630;Name=glgC;gbkey=Gene;gene=glgC;gene_biotype=protein_coding;locus_tag=LI478_RS04630 NZ_CP085478.1 Protein Homology CDS 914427 915722 . - 0 ID=cds-WP_002920566.1;Parent=gene-LI478_RS04630;Dbxref=Genbank:WP_002920566.1;Name=WP_002920566.1;Ontology_term=GO:0005978,GO:0008878;gbkey=CDS;gene=glgC;go_function=glucose-1-phosphate adenylyltransferase activity|0008878||IEA;go_process=glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229248.1;locus_tag=LI478_RS04630;product=glucose-1-phosphate adenylyltransferase;protein_id=WP_002920566.1;transl_table=11 NZ_CP085478.1 RefSeq gene 915803 917779 . - . ID=gene-LI478_RS04635;Name=glgX;gbkey=Gene;gene=glgX;gene_biotype=protein_coding;locus_tag=LI478_RS04635 NZ_CP085478.1 Protein Homology CDS 915803 917779 . - 0 ID=cds-WP_004174015.1;Parent=gene-LI478_RS04635;Dbxref=Genbank:WP_004174015.1;Name=WP_004174015.1;Ontology_term=GO:0005980,GO:0004133;gbkey=CDS;gene=glgX;go_function=glycogen debranching enzyme activity|0004133||IEA;go_process=glycogen catabolic process|0005980||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229249.1;locus_tag=LI478_RS04635;product=glycogen debranching protein GlgX;protein_id=WP_004174015.1;transl_table=11 NZ_CP085478.1 RefSeq gene 917776 919962 . - . ID=gene-LI478_RS04640;Name=glgB;gbkey=Gene;gene=glgB;gene_biotype=protein_coding;locus_tag=LI478_RS04640 NZ_CP085478.1 Protein Homology CDS 917776 919962 . - 0 ID=cds-WP_004150069.1;Parent=gene-LI478_RS04640;Dbxref=Genbank:WP_004150069.1;Name=WP_004150069.1;Ontology_term=GO:0005978,GO:0003844;gbkey=CDS;gene=glgB;go_function=1%2C4-alpha-glucan branching enzyme activity|0003844||IEA;go_process=glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229250.1;locus_tag=LI478_RS04640;product=1%2C4-alpha-glucan branching enzyme;protein_id=WP_004150069.1;transl_table=11 NZ_CP085478.1 RefSeq gene 920200 921306 . - . ID=gene-LI478_RS04645;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=LI478_RS04645 NZ_CP085478.1 Protein Homology CDS 920200 921306 . - 0 ID=cds-WP_002920570.1;Parent=gene-LI478_RS04645;Dbxref=Genbank:WP_002920570.1;Name=WP_002920570.1;Ontology_term=GO:0009089,GO:0004073;gbkey=CDS;gene=asd;go_function=aspartate-semialdehyde dehydrogenase activity|0004073||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229251.1;locus_tag=LI478_RS04645;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_002920570.1;transl_table=11 NZ_CP085478.1 RefSeq gene 921410 921772 . + . ID=gene-LI478_RS04650;Name=LI478_RS04650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS04650 NZ_CP085478.1 Protein Homology CDS 921410 921772 . + 0 ID=cds-WP_020325126.1;Parent=gene-LI478_RS04650;Dbxref=Genbank:WP_020325126.1;Name=WP_020325126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229252.1;locus_tag=LI478_RS04650;product=hypothetical protein;protein_id=WP_020325126.1;transl_table=11 NZ_CP085478.1 RefSeq gene 921769 923109 . - . ID=gene-LI478_RS04655;Name=gntU;gbkey=Gene;gene=gntU;gene_biotype=protein_coding;locus_tag=LI478_RS04655 NZ_CP085478.1 Protein Homology CDS 921769 923109 . - 0 ID=cds-WP_002920773.1;Parent=gene-LI478_RS04655;Dbxref=Genbank:WP_002920773.1;Name=WP_002920773.1;Ontology_term=GO:0035429,GO:0015128,GO:0016020;gbkey=CDS;gene=gntU;go_component=membrane|0016020||IEA;go_function=gluconate transmembrane transporter activity|0015128||IEA;go_process=gluconate transmembrane transport|0035429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229253.1;locus_tag=LI478_RS04655;product=gluconate transporter;protein_id=WP_002920773.1;transl_table=11 NZ_CP085478.1 RefSeq gene 923109 923639 . - . ID=gene-LI478_RS04660;Name=gntK;gbkey=Gene;gene=gntK;gene_biotype=protein_coding;locus_tag=LI478_RS04660 NZ_CP085478.1 Protein Homology CDS 923109 923639 . - 0 ID=cds-WP_002920775.1;Parent=gene-LI478_RS04660;Dbxref=Genbank:WP_002920775.1;Name=WP_002920775.1;gbkey=CDS;gene=gntK;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229254.1;locus_tag=LI478_RS04660;product=gluconokinase;protein_id=WP_002920775.1;transl_table=11 NZ_CP085478.1 RefSeq gene 923820 924815 . - . ID=gene-LI478_RS04665;Name=gntR;gbkey=Gene;gene=gntR;gene_biotype=protein_coding;locus_tag=LI478_RS04665 NZ_CP085478.1 Protein Homology CDS 923820 924815 . - 0 ID=cds-WP_002920777.1;Parent=gene-LI478_RS04665;Dbxref=Genbank:WP_002920777.1;Name=WP_002920777.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=gntR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001693277.1;locus_tag=LI478_RS04665;product=gluconate operon transcriptional repressor GntR;protein_id=WP_002920777.1;transl_table=11 NZ_CP085478.1 RefSeq gene 924929 925624 . - . ID=gene-LI478_RS04670;Name=LI478_RS04670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS04670 NZ_CP085478.1 Protein Homology CDS 924929 925624 . - 0 ID=cds-WP_002920779.1;Parent=gene-LI478_RS04670;Dbxref=Genbank:WP_002920779.1;Name=WP_002920779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004213399.1;locus_tag=LI478_RS04670;product=pirin family protein;protein_id=WP_002920779.1;transl_table=11 NZ_CP085478.1 RefSeq gene 925746 926783 . - . ID=gene-LI478_RS04675;Name=LI478_RS04675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS04675 NZ_CP085478.1 Protein Homology CDS 925746 926783 . - 0 ID=cds-WP_064153059.1;Parent=gene-LI478_RS04675;Dbxref=Genbank:WP_064153059.1;Name=WP_064153059.1;Ontology_term=GO:0000166;gbkey=CDS;go_function=nucleotide binding|0000166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229257.1;locus_tag=LI478_RS04675;product=oxidoreductase;protein_id=WP_064153059.1;transl_table=11 NZ_CP085478.1 RefSeq gene 927048 927701 . + . ID=gene-LI478_RS04680;Name=LI478_RS04680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS04680 NZ_CP085478.1 Protein Homology CDS 927048 927701 . + 0 ID=cds-WP_015959101.1;Parent=gene-LI478_RS04680;Dbxref=Genbank:WP_015959101.1;Name=WP_015959101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004145122.1;locus_tag=LI478_RS04680;product=polymer-forming cytoskeletal protein;protein_id=WP_015959101.1;transl_table=11 NZ_CP085478.1 RefSeq gene 927941 928471 . + . ID=gene-LI478_RS04685;Name=yhhY;gbkey=Gene;gene=yhhY;gene_biotype=protein_coding;locus_tag=LI478_RS04685 NZ_CP085478.1 Protein Homology CDS 927941 928471 . + 0 ID=cds-WP_074185247.1;Parent=gene-LI478_RS04685;Dbxref=Genbank:WP_074185247.1;Name=WP_074185247.1;Ontology_term=GO:0008080;gbkey=CDS;gene=yhhY;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229259.1;locus_tag=LI478_RS04685;product=N-acetyltransferase;protein_id=WP_074185247.1;transl_table=11 NZ_CP085478.1 RefSeq gene 928507 930252 . - . ID=gene-LI478_RS04690;Name=ggt;gbkey=Gene;gene=ggt;gene_biotype=protein_coding;locus_tag=LI478_RS04690 NZ_CP085478.1 Protein Homology CDS 928507 930252 . - 0 ID=cds-WP_004150072.1;Parent=gene-LI478_RS04690;Dbxref=Genbank:WP_004150072.1;Name=WP_004150072.1;Ontology_term=GO:0006751,GO:0036374;gbkey=CDS;gene=ggt;go_function=glutathione hydrolase activity|0036374||IEA;go_process=glutathione catabolic process|0006751||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229260.1;locus_tag=LI478_RS04690;product=gamma-glutamyltransferase;protein_id=WP_004150072.1;transl_table=11 NZ_CP085478.1 RefSeq gene 930376 930696 . + . ID=gene-LI478_RS04695;Name=LI478_RS04695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS04695 NZ_CP085478.1 Protein Homology CDS 930376 930696 . + 0 ID=cds-WP_004150073.1;Parent=gene-LI478_RS04695;Dbxref=Genbank:WP_004150073.1;Name=WP_004150073.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229261.1;locus_tag=LI478_RS04695;product=DUF2756 family protein;protein_id=WP_004150073.1;transl_table=11 NZ_CP085478.1 RefSeq gene 930720 931460 . - . ID=gene-LI478_RS04700;Name=ugpQ;gbkey=Gene;gene=ugpQ;gene_biotype=protein_coding;locus_tag=LI478_RS04700 NZ_CP085478.1 Protein Homology CDS 930720 931460 . - 0 ID=cds-WP_016531888.1;Parent=gene-LI478_RS04700;Dbxref=Genbank:WP_016531888.1;Name=WP_016531888.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;gene=ugpQ;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229262.1;locus_tag=LI478_RS04700;product=glycerophosphodiester phosphodiesterase;protein_id=WP_016531888.1;transl_table=11 NZ_CP085478.1 RefSeq gene 931457 932527 . - . ID=gene-LI478_RS04705;Name=LI478_RS04705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS04705 NZ_CP085478.1 Protein Homology CDS 931457 932527 . - 0 ID=cds-WP_004150074.1;Parent=gene-LI478_RS04705;Dbxref=Genbank:WP_004150074.1;Name=WP_004150074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229263.1;locus_tag=LI478_RS04705;product=sn-glycerol-3-phosphate import ATP-binding protein UgpC;protein_id=WP_004150074.1;transl_table=11 NZ_CP085478.1 RefSeq gene 932529 933374 . - . ID=gene-LI478_RS04710;Name=ugpE;gbkey=Gene;gene=ugpE;gene_biotype=protein_coding;locus_tag=LI478_RS04710 NZ_CP085478.1 Protein Homology CDS 932529 933374 . - 0 ID=cds-WP_004145129.1;Parent=gene-LI478_RS04710;Dbxref=Genbank:WP_004145129.1;Name=WP_004145129.1;Ontology_term=GO:0015794,GO:0005886,GO:0055052;gbkey=CDS;gene=ugpE;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_process=glycerol-3-phosphate transmembrane transport|0015794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000572177.1;locus_tag=LI478_RS04710;product=sn-glycerol-3-phosphate ABC transporter permease UgpE;protein_id=WP_004145129.1;transl_table=11 NZ_CP085478.1 RefSeq gene 933371 934258 . - . ID=gene-LI478_RS04715;Name=ugpA;gbkey=Gene;gene=ugpA;gene_biotype=protein_coding;locus_tag=LI478_RS04715 NZ_CP085478.1 Protein Homology CDS 933371 934258 . - 0 ID=cds-WP_002920792.1;Parent=gene-LI478_RS04715;Dbxref=Genbank:WP_002920792.1;Name=WP_002920792.1;gbkey=CDS;gene=ugpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000099274.1;locus_tag=LI478_RS04715;product=sn-glycerol-3-phosphate ABC transporter permease UgpA;protein_id=WP_002920792.1;transl_table=11 NZ_CP085478.1 RefSeq gene 934365 935681 . - . ID=gene-LI478_RS04720;Name=ugpB;gbkey=Gene;gene=ugpB;gene_biotype=protein_coding;locus_tag=LI478_RS04720 NZ_CP085478.1 Protein Homology CDS 934365 935681 . - 0 ID=cds-WP_002920796.1;Parent=gene-LI478_RS04720;Dbxref=Genbank:WP_002920796.1;Name=WP_002920796.1;Ontology_term=GO:0055085;gbkey=CDS;gene=ugpB;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229266.1;locus_tag=LI478_RS04720;product=sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB;protein_id=WP_002920796.1;transl_table=11 NZ_CP085478.1 RefSeq gene 935954 936322 . - . ID=gene-LI478_RS04725;Name=LI478_RS04725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS04725 NZ_CP085478.1 Protein Homology CDS 935954 936322 . - 0 ID=cds-WP_002920800.1;Parent=gene-LI478_RS04725;Dbxref=Genbank:WP_002920800.1;Name=WP_002920800.1;Ontology_term=GO:0016301;gbkey=CDS;go_function=kinase activity|0016301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229267.1;locus_tag=LI478_RS04725;product=type II toxin-antitoxin system death-on-curing family toxin;protein_id=WP_002920800.1;transl_table=11 NZ_CP085478.1 RefSeq gene 936319 936540 . - . ID=gene-LI478_RS04730;Name=LI478_RS04730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS04730 NZ_CP085478.1 Protein Homology CDS 936319 936540 . - 0 ID=cds-WP_004174006.1;Parent=gene-LI478_RS04730;Dbxref=Genbank:WP_004174006.1;Name=WP_004174006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229268.1;locus_tag=LI478_RS04730;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_004174006.1;transl_table=11 NZ_CP085478.1 RefSeq gene 936704 937417 . - . ID=gene-LI478_RS04735;Name=livF;gbkey=Gene;gene=livF;gene_biotype=protein_coding;locus_tag=LI478_RS04735 NZ_CP085478.1 Protein Homology CDS 936704 937417 . - 0 ID=cds-WP_004145133.1;Parent=gene-LI478_RS04735;Dbxref=Genbank:WP_004145133.1;Name=WP_004145133.1;gbkey=CDS;gene=livF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229269.1;locus_tag=LI478_RS04735;product=high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF;protein_id=WP_004145133.1;transl_table=11 NZ_CP085478.1 RefSeq gene 937419 938186 . - . ID=gene-LI478_RS04740;Name=livG;gbkey=Gene;gene=livG;gene_biotype=protein_coding;locus_tag=LI478_RS04740 NZ_CP085478.1 Protein Homology CDS 937419 938186 . - 0 ID=cds-WP_002920803.1;Parent=gene-LI478_RS04740;Dbxref=Genbank:WP_002920803.1;Name=WP_002920803.1;gbkey=CDS;gene=livG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000084170.1;locus_tag=LI478_RS04740;product=high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG;protein_id=WP_002920803.1;transl_table=11 NZ_CP085478.1 RefSeq gene 938183 939460 . - . ID=gene-LI478_RS04745;Name=livM;gbkey=Gene;gene=livM;gene_biotype=protein_coding;locus_tag=LI478_RS04745 NZ_CP085478.1 Protein Homology CDS 938183 939460 . - 0 ID=cds-WP_004174005.1;Parent=gene-LI478_RS04745;Dbxref=Genbank:WP_004174005.1;Name=WP_004174005.1;gbkey=CDS;gene=livM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229271.1;locus_tag=LI478_RS04745;product=branched chain amino acid ABC transporter permease LivM;protein_id=WP_004174005.1;transl_table=11 NZ_CP085478.1 RefSeq gene 939457 940383 . - . ID=gene-LI478_RS04750;Name=livH;gbkey=Gene;gene=livH;gene_biotype=protein_coding;locus_tag=LI478_RS04750 NZ_CP085478.1 Protein Homology CDS 939457 940383 . - 0 ID=cds-WP_002920807.1;Parent=gene-LI478_RS04750;Dbxref=Genbank:WP_002920807.1;Name=WP_002920807.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=livH;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010436488.1;locus_tag=LI478_RS04750;product=high-affinity branched-chain amino acid ABC transporter permease LivH;protein_id=WP_002920807.1;transl_table=11 NZ_CP085478.1 RefSeq gene 940445 941554 . - . ID=gene-LI478_RS04755;Name=livK;gbkey=Gene;gene=livK;gene_biotype=protein_coding;locus_tag=LI478_RS04755 NZ_CP085478.1 Protein Homology CDS 940445 941554 . - 0 ID=cds-WP_004150079.1;Parent=gene-LI478_RS04755;Dbxref=Genbank:WP_004150079.1;Name=WP_004150079.1;gbkey=CDS;gene=livK;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229273.1;locus_tag=LI478_RS04755;product=high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK;protein_id=WP_004150079.1;transl_table=11 NZ_CP085478.1 RefSeq gene 941978 942361 . + . ID=gene-LI478_RS04760;Name=panM;gbkey=Gene;gene=panM;gene_biotype=protein_coding;locus_tag=LI478_RS04760 NZ_CP085478.1 Protein Homology CDS 941978 942361 . + 0 ID=cds-WP_023328322.1;Parent=gene-LI478_RS04760;Dbxref=Genbank:WP_023328322.1;Name=WP_023328322.1;Ontology_term=GO:0015940,GO:0031638,GO:0008080;gbkey=CDS;gene=panM;go_function=N-acetyltransferase activity|0008080||IEA;go_process=pantothenate biosynthetic process|0015940||IEA,zymogen activation|0031638||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229276.1;locus_tag=LI478_RS04760;product=aspartate 1-decarboxylase autocleavage activator PanM;protein_id=WP_023328322.1;transl_table=11 NZ_CP085478.1 RefSeq gene 942755 943858 . - . ID=gene-LI478_RS04765;Name=livJ;gbkey=Gene;gene=livJ;gene_biotype=protein_coding;locus_tag=LI478_RS04765 NZ_CP085478.1 Protein Homology CDS 942755 943858 . - 0 ID=cds-WP_002920812.1;Parent=gene-LI478_RS04765;Dbxref=Genbank:WP_002920812.1;Name=WP_002920812.1;gbkey=CDS;gene=livJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229277.1;locus_tag=LI478_RS04765;product=branched chain amino acid ABC transporter substrate-binding protein LivJ;protein_id=WP_002920812.1;transl_table=11 NZ_CP085478.1 RefSeq gene 944116 945360 . - . ID=gene-LI478_RS04770;Name=LI478_RS04770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS04770 NZ_CP085478.1 Protein Homology CDS 944116 945360 . - 0 ID=cds-WP_004150081.1;Parent=gene-LI478_RS04770;Dbxref=Genbank:WP_004150081.1;Name=WP_004150081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229278.1;locus_tag=LI478_RS04770;product=amino acid permease;protein_id=WP_004150081.1;transl_table=11 NZ_CP085478.1 RefSeq gene 945508 946773 . - . ID=gene-LI478_RS04775;Name=LI478_RS04775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS04775 NZ_CP085478.1 Protein Homology CDS 945508 946773 . - 0 ID=cds-WP_040182439.1;Parent=gene-LI478_RS04775;Dbxref=Genbank:WP_040182439.1;Name=WP_040182439.1;Ontology_term=GO:0009448,GO:0003867,GO:0030170;gbkey=CDS;go_function=4-aminobutyrate transaminase activity|0003867||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=gamma-aminobutyric acid metabolic process|0009448||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229279.1;locus_tag=LI478_RS04775;product=4-aminobutyrate--2-oxoglutarate transaminase;protein_id=WP_040182439.1;transl_table=11 NZ_CP085478.1 RefSeq gene 946892 948415 . + . ID=gene-LI478_RS04780;Name=LI478_RS04780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS04780 NZ_CP085478.1 Protein Homology CDS 946892 948415 . + 0 ID=cds-WP_023283044.1;Parent=gene-LI478_RS04780;Dbxref=Genbank:WP_023283044.1;Name=WP_023283044.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229280.1;locus_tag=LI478_RS04780;product=PLP-dependent aminotransferase family protein;protein_id=WP_023283044.1;transl_table=11 NZ_CP085478.1 RefSeq gene 948468 949322 . - . ID=gene-LI478_RS04785;Name=rpoH;gbkey=Gene;gene=rpoH;gene_biotype=protein_coding;locus_tag=LI478_RS04785 NZ_CP085478.1 Protein Homology CDS 948468 949322 . - 0 ID=cds-WP_002920815.1;Parent=gene-LI478_RS04785;Dbxref=Genbank:WP_002920815.1;Name=WP_002920815.1;Ontology_term=GO:0006352,GO:0016987;gbkey=CDS;gene=rpoH;go_function=sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008458573.1;locus_tag=LI478_RS04785;product=RNA polymerase sigma factor RpoH;protein_id=WP_002920815.1;transl_table=11 NZ_CP085478.1 RefSeq gene 949592 950647 . - . ID=gene-LI478_RS04790;Name=ftsX;gbkey=Gene;gene=ftsX;gene_biotype=protein_coding;locus_tag=LI478_RS04790 NZ_CP085478.1 Protein Homology CDS 949592 950647 . - 0 ID=cds-WP_004173994.1;Parent=gene-LI478_RS04790;Dbxref=Genbank:WP_004173994.1;Name=WP_004173994.1;Ontology_term=GO:0000910;gbkey=CDS;gene=ftsX;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229282.1;locus_tag=LI478_RS04790;product=permease-like cell division protein FtsX;protein_id=WP_004173994.1;transl_table=11 NZ_CP085478.1 RefSeq gene 950640 951308 . - . ID=gene-LI478_RS04795;Name=ftsE;gbkey=Gene;gene=ftsE;gene_biotype=protein_coding;locus_tag=LI478_RS04795 NZ_CP085478.1 Protein Homology CDS 950640 951308 . - 0 ID=cds-WP_002920817.1;Parent=gene-LI478_RS04795;Dbxref=Genbank:WP_002920817.1;Name=WP_002920817.1;gbkey=CDS;gene=ftsE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229283.1;locus_tag=LI478_RS04795;product=cell division ATP-binding protein FtsE;protein_id=WP_002920817.1;transl_table=11 NZ_CP085478.1 RefSeq gene 951311 952834 . - . ID=gene-LI478_RS04800;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;locus_tag=LI478_RS04800 NZ_CP085478.1 Protein Homology CDS 951311 952834 . - 0 ID=cds-WP_004188286.1;Parent=gene-LI478_RS04800;Dbxref=Genbank:WP_004188286.1;Name=WP_004188286.1;Ontology_term=GO:0009306,GO:0003924,GO:0005047;gbkey=CDS;gene=ftsY;go_function=GTPase activity|0003924||IEA,signal recognition particle binding|0005047||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229284.1;locus_tag=LI478_RS04800;product=signal recognition particle-docking protein FtsY;protein_id=WP_004188286.1;transl_table=11 NZ_CP085478.1 RefSeq gene 953017 953613 . + . ID=gene-LI478_RS04805;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=LI478_RS04805 NZ_CP085478.1 Protein Homology CDS 953017 953613 . + 0 ID=cds-WP_002920820.1;Parent=gene-LI478_RS04805;Dbxref=Genbank:WP_002920820.1;Name=WP_002920820.1;Ontology_term=GO:0031167,GO:0003676,GO:0008168;gbkey=CDS;gene=rsmD;go_function=nucleic acid binding|0003676||IEA,methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229285.1;locus_tag=LI478_RS04805;product=16S rRNA (guanine(966)-N(2))-methyltransferase;protein_id=WP_002920820.1;transl_table=11 NZ_CP085478.1 RefSeq gene 953603 953878 . + . ID=gene-LI478_RS04810;Name=LI478_RS04810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS04810 NZ_CP085478.1 Protein Homology CDS 953603 953878 . + 0 ID=cds-WP_002920822.1;Parent=gene-LI478_RS04810;Dbxref=Genbank:WP_002920822.1;Name=WP_002920822.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229286.1;locus_tag=LI478_RS04810;product=DUF1145 family protein;protein_id=WP_002920822.1;transl_table=11 NZ_CP085478.1 RefSeq gene 953892 954242 . - . ID=gene-LI478_RS04815;Name=LI478_RS04815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS04815 NZ_CP085478.1 Protein Homology CDS 953892 954242 . - 0 ID=cds-WP_004173989.1;Parent=gene-LI478_RS04815;Dbxref=Genbank:WP_004173989.1;Name=WP_004173989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229287.1;locus_tag=LI478_RS04815;product=DUF2500 domain-containing protein;protein_id=WP_004173989.1;transl_table=11 NZ_CP085478.1 RefSeq gene 954393 955019 . + . ID=gene-LI478_RS04820;Name=LI478_RS04820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS04820 NZ_CP085478.1 Protein Homology CDS 954393 955019 . + 0 ID=cds-WP_004173987.1;Parent=gene-LI478_RS04820;Dbxref=Genbank:WP_004173987.1;Name=WP_004173987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229288.1;locus_tag=LI478_RS04820;product=lysoplasmalogenase;protein_id=WP_004173987.1;transl_table=11 NZ_CP085478.1 RefSeq gene 955098 957308 . + . ID=gene-LI478_RS04825;Name=zntA;gbkey=Gene;gene=zntA;gene_biotype=protein_coding;locus_tag=LI478_RS04825 NZ_CP085478.1 Protein Homology CDS 955098 957308 . + 0 ID=cds-WP_032415774.1;Parent=gene-LI478_RS04825;Dbxref=Genbank:WP_032415774.1;Name=WP_032415774.1;Ontology_term=GO:0006812,GO:0005215,GO:0005524,GO:0016887,GO:0019829,GO:0046872,GO:0016020;gbkey=CDS;gene=zntA;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled cation transmembrane transporter activity|0019829||IEA,metal ion binding|0046872||IEA;go_process=cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229289.1;locus_tag=LI478_RS04825;product=Zn(II)/Cd(II)/Pb(II) translocating P-type ATPase ZntA;protein_id=WP_032415774.1;transl_table=11 NZ_CP085478.1 RefSeq gene 957635 957880 . - . ID=gene-LI478_RS04830;Name=tusA;gbkey=Gene;gene=tusA;gene_biotype=protein_coding;locus_tag=LI478_RS04830 NZ_CP085478.1 Protein Homology CDS 957635 957880 . - 0 ID=cds-WP_002920858.1;Parent=gene-LI478_RS04830;Dbxref=Genbank:WP_002920858.1;Name=WP_002920858.1;Ontology_term=GO:0002143,GO:0097163;gbkey=CDS;gene=tusA;go_function=sulfur carrier activity|0097163||IEA;go_process=tRNA wobble position uridine thiolation|0002143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229290.1;locus_tag=LI478_RS04830;product=sulfurtransferase TusA;protein_id=WP_002920858.1;transl_table=11 NZ_CP085478.1 RefSeq gene 958087 958752 . + . ID=gene-LI478_RS04835;Name=LI478_RS04835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS04835 NZ_CP085478.1 Protein Homology CDS 958087 958752 . + 0 ID=cds-WP_002920860.1;Parent=gene-LI478_RS04835;Dbxref=Genbank:WP_002920860.1;Name=WP_002920860.1;Ontology_term=GO:1990397;gbkey=CDS;go_process=queuosine salvage|1990397||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229291.1;locus_tag=LI478_RS04835;product=7-cyano-7-deazaguanine/7-aminomethyl-7-deazaguanine transporter;protein_id=WP_002920860.1;transl_table=11 NZ_CP085478.1 RefSeq gene 958826 959383 . + . ID=gene-LI478_RS04840;Name=LI478_RS04840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS04840 NZ_CP085478.1 Protein Homology CDS 958826 959383 . + 0 ID=cds-WP_064153057.1;Parent=gene-LI478_RS04840;Dbxref=Genbank:WP_064153057.1;Name=WP_064153057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229292.1;locus_tag=LI478_RS04840;product=DcrB family lipoprotein;protein_id=WP_064153057.1;transl_table=11 NZ_CP085478.1 RefSeq gene 959384 960604 . - . ID=gene-LI478_RS04845;Name=LI478_RS04845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS04845 NZ_CP085478.1 Protein Homology CDS 959384 960604 . - 0 ID=cds-WP_004173981.1;Parent=gene-LI478_RS04845;Dbxref=Genbank:WP_004173981.1;Name=WP_004173981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229293.1;locus_tag=LI478_RS04845;product=MFS transporter;protein_id=WP_004173981.1;transl_table=11 NZ_CP085478.1 RefSeq gene 960738 961787 . + . ID=gene-LI478_RS04850;Name=LI478_RS04850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS04850 NZ_CP085478.1 Protein Homology CDS 960738 961787 . + 0 ID=cds-WP_048288929.1;Parent=gene-LI478_RS04850;Dbxref=Genbank:WP_048288929.1;Name=WP_048288929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462483.1;locus_tag=LI478_RS04850;product=AI-2E family transporter;protein_id=WP_048288929.1;transl_table=11 NZ_CP085478.1 RefSeq gene 961784 962164 . - . ID=gene-LI478_RS04855;Name=arnF;gbkey=Gene;gene=arnF;gene_biotype=protein_coding;locus_tag=LI478_RS04855 NZ_CP085478.1 Protein Homology CDS 961784 962164 . - 0 ID=cds-WP_002920863.1;Parent=gene-LI478_RS04855;Dbxref=Genbank:WP_002920863.1;Name=WP_002920863.1;gbkey=CDS;gene=arnF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229296.1;locus_tag=LI478_RS04855;product=4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF;protein_id=WP_002920863.1;transl_table=11 NZ_CP085478.1 RefSeq gene 962164 962502 . - . ID=gene-LI478_RS04860;Name=arnE;gbkey=Gene;gene=arnE;gene_biotype=protein_coding;locus_tag=LI478_RS04860 NZ_CP085478.1 Protein Homology CDS 962164 962502 . - 0 ID=cds-WP_002920864.1;Parent=gene-LI478_RS04860;Dbxref=Genbank:WP_002920864.1;Name=WP_002920864.1;gbkey=CDS;gene=arnE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229297.1;locus_tag=LI478_RS04860;product=4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE;protein_id=WP_002920864.1;transl_table=11 NZ_CP085478.1 RefSeq gene 962499 964154 . - . ID=gene-LI478_RS04865;Name=arnT;gbkey=Gene;gene=arnT;gene_biotype=protein_coding;locus_tag=LI478_RS04865 NZ_CP085478.1 Protein Homology CDS 962499 964154 . - 0 ID=cds-WP_048332057.1;Parent=gene-LI478_RS04865;Dbxref=Genbank:WP_048332057.1;Name=WP_048332057.1;Ontology_term=GO:0006493,GO:0000030,GO:0016763,GO:0016020;gbkey=CDS;gene=arnT;go_component=membrane|0016020||IEA;go_function=mannosyltransferase activity|0000030||IEA,pentosyltransferase activity|0016763||IEA;go_process=protein O-linked glycosylation|0006493||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229298.1;locus_tag=LI478_RS04865;product=lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase;protein_id=WP_048332057.1;transl_table=11 NZ_CP085478.1 RefSeq gene 964154 965056 . - . ID=gene-LI478_RS04870;Name=arnD;gbkey=Gene;gene=arnD;gene_biotype=protein_coding;locus_tag=LI478_RS04870 NZ_CP085478.1 Protein Homology CDS 964154 965056 . - 0 ID=cds-WP_009308746.1;Parent=gene-LI478_RS04870;Dbxref=Genbank:WP_009308746.1;Name=WP_009308746.1;Ontology_term=GO:0016810;gbkey=CDS;gene=arnD;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229299.1;locus_tag=LI478_RS04870;product=4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase;protein_id=WP_009308746.1;transl_table=11 NZ_CP085478.1 RefSeq gene 965053 967038 . - . ID=gene-LI478_RS04875;Name=arnA;gbkey=Gene;gene=arnA;gene_biotype=protein_coding;locus_tag=LI478_RS04875 NZ_CP085478.1 Protein Homology CDS 965053 967038 . - 0 ID=cds-WP_004173963.1;Parent=gene-LI478_RS04875;Dbxref=Genbank:WP_004173963.1;Name=WP_004173963.1;Ontology_term=GO:0009058,GO:0016742;gbkey=CDS;gene=arnA;go_function=hydroxymethyl-%2C formyl- and related transferase activity|0016742||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229300.1;locus_tag=LI478_RS04875;product=bifunctional UDP-4-amino-4-deoxy-L-arabinose formyltransferase/UDP-glucuronic acid oxidase ArnA;protein_id=WP_004173963.1;transl_table=11 NZ_CP085478.1 RefSeq gene 967035 968018 . - . ID=gene-LI478_RS04880;Name=arnC;gbkey=Gene;gene=arnC;gene_biotype=protein_coding;locus_tag=LI478_RS04880 NZ_CP085478.1 Protein Homology CDS 967035 968018 . - 0 ID=cds-WP_002921035.1;Parent=gene-LI478_RS04880;Dbxref=Genbank:WP_002921035.1;Name=WP_002921035.1;Ontology_term=GO:0016780;gbkey=CDS;gene=arnC;go_function=phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229301.1;locus_tag=LI478_RS04880;product=undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase;protein_id=WP_002921035.1;transl_table=11 NZ_CP085478.1 RefSeq gene 968020 969159 . - . ID=gene-LI478_RS04885;Name=arnB;gbkey=Gene;gene=arnB;gene_biotype=protein_coding;locus_tag=LI478_RS04885 NZ_CP085478.1 Protein Homology CDS 968020 969159 . - 0 ID=cds-WP_032415777.1;Parent=gene-LI478_RS04885;Dbxref=Genbank:WP_032415777.1;Name=WP_032415777.1;Ontology_term=GO:0008483;gbkey=CDS;gene=arnB;go_function=transaminase activity|0008483||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229302.1;locus_tag=LI478_RS04885;product=UDP-4-amino-4-deoxy-L-arabinose aminotransferase;protein_id=WP_032415777.1;transl_table=11 NZ_CP085478.1 RefSeq gene 969556 970062 . - . ID=gene-LI478_RS04890;Name=LI478_RS04890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS04890 NZ_CP085478.1 Protein Homology CDS 969556 970062 . - 0 ID=cds-WP_004181483.1;Parent=gene-LI478_RS04890;Dbxref=Genbank:WP_004181483.1;Name=WP_004181483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229303.1;locus_tag=LI478_RS04890;product=phenolic acid decarboxylase;protein_id=WP_004181483.1;transl_table=11 NZ_CP085478.1 RefSeq gene 970160 971020 . + . ID=gene-LI478_RS04895;Name=LI478_RS04895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS04895 NZ_CP085478.1 Protein Homology CDS 970160 971020 . + 0 ID=cds-WP_019705029.1;Parent=gene-LI478_RS04895;Dbxref=Genbank:WP_019705029.1;Name=WP_019705029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229304.1;locus_tag=LI478_RS04895;product=LysR family transcriptional regulator;protein_id=WP_019705029.1;transl_table=11 NZ_CP085478.1 RefSeq gene 971159 972727 . + . ID=gene-LI478_RS04900;Name=nikA;gbkey=Gene;gene=nikA;gene_biotype=protein_coding;locus_tag=LI478_RS04900 NZ_CP085478.1 Protein Homology CDS 971159 972727 . + 0 ID=cds-WP_032415778.1;Parent=gene-LI478_RS04900;Dbxref=Genbank:WP_032415778.1;Name=WP_032415778.1;Ontology_term=GO:0015675,GO:0015413,GO:0016151,GO:0009897,GO:0030288,GO:0055052;gbkey=CDS;gene=nikA;go_component=external side of plasma membrane|0009897||IEA,outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type nickel transporter activity|0015413||IEA,nickel cation binding|0016151||IEA;go_process=nickel cation transport|0015675||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229305.1;locus_tag=LI478_RS04900;product=nickel ABC transporter substrate-binding protein;protein_id=WP_032415778.1;transl_table=11 NZ_CP085478.1 RefSeq gene 972727 973671 . + . ID=gene-LI478_RS04905;Name=nikB;gbkey=Gene;gene=nikB;gene_biotype=protein_coding;locus_tag=LI478_RS04905 NZ_CP085478.1 Protein Homology CDS 972727 973671 . + 0 ID=cds-WP_032415779.1;Parent=gene-LI478_RS04905;Dbxref=Genbank:WP_032415779.1;Name=WP_032415779.1;gbkey=CDS;gene=nikB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229306.1;locus_tag=LI478_RS04905;product=nickel ABC transporter permease subunit NikB;protein_id=WP_032415779.1;transl_table=11 NZ_CP085478.1 RefSeq gene 973668 974501 . + . ID=gene-LI478_RS04910;Name=nikC;gbkey=Gene;gene=nikC;gene_biotype=protein_coding;locus_tag=LI478_RS04910 NZ_CP085478.1 Protein Homology CDS 973668 974501 . + 0 ID=cds-WP_004188270.1;Parent=gene-LI478_RS04910;Dbxref=Genbank:WP_004188270.1;Name=WP_004188270.1;Ontology_term=GO:0055085,GO:0015099,GO:0016020;gbkey=CDS;gene=nikC;go_component=membrane|0016020||IEA;go_function=nickel cation transmembrane transporter activity|0015099||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229307.1;locus_tag=LI478_RS04910;product=nickel ABC transporter permease subunit NikC;protein_id=WP_004188270.1;transl_table=11 NZ_CP085478.1 RefSeq gene 974501 975265 . + . ID=gene-LI478_RS04915;Name=LI478_RS04915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS04915 NZ_CP085478.1 Protein Homology CDS 974501 975265 . + 0 ID=cds-WP_004173959.1;Parent=gene-LI478_RS04915;Dbxref=Genbank:WP_004173959.1;Name=WP_004173959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229308.1;locus_tag=LI478_RS04915;product=nickel import ATP-binding protein NikD;protein_id=WP_004173959.1;transl_table=11 NZ_CP085478.1 RefSeq gene 975262 976053 . + . ID=gene-LI478_RS04920;Name=nikE;gbkey=Gene;gene=nikE;gene_biotype=protein_coding;locus_tag=LI478_RS04920 NZ_CP085478.1 Protein Homology CDS 975262 976053 . + 0 ID=cds-WP_009308750.1;Parent=gene-LI478_RS04920;Dbxref=Genbank:WP_009308750.1;Name=WP_009308750.1;Ontology_term=GO:0015675,GO:0005524,GO:0015413,GO:0009898,GO:0043190;gbkey=CDS;gene=nikE;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type nickel transporter activity|0015413||IEA;go_process=nickel cation transport|0015675||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229309.1;locus_tag=LI478_RS04920;product=nickel import ATP-binding protein NikE;protein_id=WP_009308750.1;transl_table=11 NZ_CP085478.1 RefSeq gene 976041 976439 . + . ID=gene-LI478_RS04925;Name=nikR;gbkey=Gene;gene=nikR;gene_biotype=protein_coding;locus_tag=LI478_RS04925 NZ_CP085478.1 Protein Homology CDS 976041 976439 . + 0 ID=cds-WP_002921188.1;Parent=gene-LI478_RS04925;Dbxref=Genbank:WP_002921188.1;Name=WP_002921188.1;Ontology_term=GO:0006355,GO:0010045,GO:0003677,GO:0016151;gbkey=CDS;gene=nikR;go_function=DNA binding|0003677||IEA,nickel cation binding|0016151||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to nickel cation|0010045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229310.1;locus_tag=LI478_RS04925;product=nickel-responsive transcriptional regulator NikR;protein_id=WP_002921188.1;transl_table=11 NZ_CP085478.1 cmsearch riboswitch 976538 976719 . + . ID=id-NZ_CP085478.1:976538..976719;Dbxref=RFAM:RF00380;Note=The M-box (ykoK) riboswitch appears to function as a genetic 'off' switch that is important for maintaining magnesium homeostasis in bacteria;bound_moiety=magnesium;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_CP085478.1 RefSeq gene 976777 977790 . + . ID=gene-LI478_RS04930;Name=LI478_RS04930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS04930 NZ_CP085478.1 Protein Homology CDS 976777 977790 . + 0 ID=cds-WP_004181490.1;Parent=gene-LI478_RS04930;Dbxref=Genbank:WP_004181490.1;Name=WP_004181490.1;Ontology_term=GO:0006812,GO:0008324;gbkey=CDS;go_function=cation transmembrane transporter activity|0008324||IEA;go_process=cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229311.1;locus_tag=LI478_RS04930;product=magnesium transporter;protein_id=WP_004181490.1;transl_table=11 NZ_CP085478.1 RefSeq gene 977830 979023 . - . ID=gene-LI478_RS04935;Name=LI478_RS04935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS04935 NZ_CP085478.1 Protein Homology CDS 977830 979023 . - 0 ID=cds-WP_004150109.1;Parent=gene-LI478_RS04935;Dbxref=Genbank:WP_004150109.1;Name=WP_004150109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229312.1;locus_tag=LI478_RS04935;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_004150109.1;transl_table=11 NZ_CP085478.1 RefSeq gene 979253 980749 . + . ID=gene-LI478_RS04940;Name=pitA;gbkey=Gene;gene=pitA;gene_biotype=protein_coding;locus_tag=LI478_RS04940 NZ_CP085478.1 Protein Homology CDS 979253 980749 . + 0 ID=cds-WP_002921200.1;Parent=gene-LI478_RS04940;Dbxref=Genbank:WP_002921200.1;Name=WP_002921200.1;Ontology_term=GO:0016020;gbkey=CDS;gene=pitA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229313.1;locus_tag=LI478_RS04940;product=inorganic phosphate transporter PitA;protein_id=WP_002921200.1;transl_table=11 NZ_CP085478.1 RefSeq gene 980805 981140 . - . ID=gene-LI478_RS04945;Name=uspB;gbkey=Gene;gene=uspB;gene_biotype=protein_coding;locus_tag=LI478_RS04945 NZ_CP085478.1 Protein Homology CDS 980805 981140 . - 0 ID=cds-WP_002921203.1;Parent=gene-LI478_RS04945;Dbxref=Genbank:WP_002921203.1;Name=WP_002921203.1;gbkey=CDS;gene=uspB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312393.1;locus_tag=LI478_RS04945;product=universal stress protein UspB;protein_id=WP_002921203.1;transl_table=11 NZ_CP085478.1 RefSeq gene 981523 981960 . + . ID=gene-LI478_RS04950;Name=uspA;gbkey=Gene;gene=uspA;gene_biotype=protein_coding;locus_tag=LI478_RS04950 NZ_CP085478.1 Protein Homology CDS 981523 981960 . + 0 ID=cds-WP_004145166.1;Parent=gene-LI478_RS04950;Dbxref=Genbank:WP_004145166.1;Name=WP_004145166.1;gbkey=CDS;gene=uspA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229315.1;locus_tag=LI478_RS04950;product=universal stress protein UspA;protein_id=WP_004145166.1;transl_table=11 NZ_CP085478.1 RefSeq gene 982241 983689 . + . ID=gene-LI478_RS04955;Name=dtpB;gbkey=Gene;gene=dtpB;gene_biotype=protein_coding;locus_tag=LI478_RS04955 NZ_CP085478.1 Protein Homology CDS 982241 983689 . + 0 ID=cds-WP_004219006.1;Parent=gene-LI478_RS04955;Dbxref=Genbank:WP_004219006.1;Name=WP_004219006.1;gbkey=CDS;gene=dtpB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229316.1;locus_tag=LI478_RS04955;product=dipeptide/tripeptide permease DtpB;protein_id=WP_004219006.1;transl_table=11 NZ_CP085478.1 RefSeq gene 983835 984587 . - . ID=gene-LI478_RS04960;Name=rsmJ;gbkey=Gene;gene=rsmJ;gene_biotype=protein_coding;locus_tag=LI478_RS04960 NZ_CP085478.1 Protein Homology CDS 983835 984587 . - 0 ID=cds-WP_004188262.1;Parent=gene-LI478_RS04960;Dbxref=Genbank:WP_004188262.1;Name=WP_004188262.1;Ontology_term=GO:0031167,GO:0008990;gbkey=CDS;gene=rsmJ;go_function=rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229317.1;locus_tag=LI478_RS04960;product=16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ;protein_id=WP_004188262.1;transl_table=11 NZ_CP085478.1 RefSeq gene 984595 986637 . - . ID=gene-LI478_RS04965;Name=prlC;gbkey=Gene;gene=prlC;gene_biotype=protein_coding;locus_tag=LI478_RS04965 NZ_CP085478.1 Protein Homology CDS 984595 986637 . - 0 ID=cds-WP_004151426.1;Parent=gene-LI478_RS04965;Dbxref=Genbank:WP_004151426.1;Name=WP_004151426.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=prlC;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020317218.1;locus_tag=LI478_RS04965;product=oligopeptidase A;protein_id=WP_004151426.1;transl_table=11 NZ_CP085478.1 RefSeq gene 986820 988091 . - . ID=gene-LI478_RS04970;Name=LI478_RS04970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS04970 NZ_CP085478.1 Protein Homology CDS 986820 988091 . - 0 ID=cds-WP_004150114.1;Parent=gene-LI478_RS04970;Dbxref=Genbank:WP_004150114.1;Name=WP_004150114.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229319.1;locus_tag=LI478_RS04970;product=phosphatase PAP2 family protein;protein_id=WP_004150114.1;transl_table=11 NZ_CP085478.1 RefSeq gene 988285 989127 . + . ID=gene-LI478_RS04975;Name=LI478_RS04975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS04975 NZ_CP085478.1 Protein Homology CDS 988285 989127 . + 0 ID=cds-WP_032415781.1;Parent=gene-LI478_RS04975;Dbxref=Genbank:WP_032415781.1;Name=WP_032415781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229320.1;locus_tag=LI478_RS04975;product=23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ;protein_id=WP_032415781.1;transl_table=11 NZ_CP085478.1 RefSeq gene 989200 990552 . + . ID=gene-LI478_RS04980;Name=gorA;gbkey=Gene;gene=gorA;gene_biotype=protein_coding;locus_tag=LI478_RS04980 NZ_CP085478.1 Protein Homology CDS 989200 990552 . + 0 ID=cds-WP_002921271.1;Parent=gene-LI478_RS04980;Dbxref=Genbank:WP_002921271.1;Name=WP_002921271.1;Ontology_term=GO:0006749,GO:0045454,GO:0004362,GO:0050660,GO:0050661;gbkey=CDS;gene=gorA;go_function=glutathione-disulfide reductase (NADPH) activity|0004362||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;go_process=glutathione metabolic process|0006749||IEA,cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861215.1;locus_tag=LI478_RS04980;product=glutathione-disulfide reductase;protein_id=WP_002921271.1;transl_table=11 NZ_CP085478.1 RefSeq gene 990606 991229 . - . ID=gene-LI478_RS04985;Name=LI478_RS04985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS04985 NZ_CP085478.1 Protein Homology CDS 990606 991229 . - 0 ID=cds-WP_004173953.1;Parent=gene-LI478_RS04985;Dbxref=Genbank:WP_004173953.1;Name=WP_004173953.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012540364.1;locus_tag=LI478_RS04985;product=glutathione S-transferase;protein_id=WP_004173953.1;transl_table=11 NZ_CP085478.1 RefSeq gene 991356 992504 . + . ID=gene-LI478_RS04990;Name=LI478_RS04990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS04990 NZ_CP085478.1 Protein Homology CDS 991356 992504 . + 0 ID=cds-WP_032415782.1;Parent=gene-LI478_RS04990;Dbxref=Genbank:WP_032415782.1;Name=WP_032415782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229323.1;locus_tag=LI478_RS04990;product=iron-containing alcohol dehydrogenase;protein_id=WP_032415782.1;transl_table=11 NZ_CP085478.1 RefSeq gene 992744 994396 . + . ID=gene-LI478_RS04995;Name=LI478_RS04995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS04995 NZ_CP085478.1 Protein Homology CDS 992744 994396 . + 0 ID=cds-WP_004150117.1;Parent=gene-LI478_RS04995;Dbxref=Genbank:WP_004150117.1;Name=WP_004150117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229324.1;locus_tag=LI478_RS04995;product=alpha%2Calpha-trehalase;protein_id=WP_004150117.1;transl_table=11 NZ_CP085478.1 RefSeq gene 994463 994996 . + . ID=gene-LI478_RS05000;Name=LI478_RS05000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS05000 NZ_CP085478.1 Protein Homology CDS 994463 994996 . + 0 ID=cds-WP_004901185.1;Parent=gene-LI478_RS05000;Dbxref=Genbank:WP_004901185.1;Name=WP_004901185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229325.1;locus_tag=LI478_RS05000;product=GNAT family protein;protein_id=WP_004901185.1;transl_table=11 NZ_CP085478.1 RefSeq gene 995031 995789 . - . ID=gene-LI478_RS05005;Name=LI478_RS05005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS05005 NZ_CP085478.1 Protein Homology CDS 995031 995789 . - 0 ID=cds-WP_002921336.1;Parent=gene-LI478_RS05005;Dbxref=Genbank:WP_002921336.1;Name=WP_002921336.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229326.1;locus_tag=LI478_RS05005;product=SDR family oxidoreductase;protein_id=WP_002921336.1;transl_table=11 NZ_CP085478.1 RefSeq gene 995908 996807 . + . ID=gene-LI478_RS05010;Name=LI478_RS05010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS05010 NZ_CP085478.1 Protein Homology CDS 995908 996807 . + 0 ID=cds-WP_004145179.1;Parent=gene-LI478_RS05010;Dbxref=Genbank:WP_004145179.1;Name=WP_004145179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229327.1;locus_tag=LI478_RS05010;product=LysR family transcriptional regulator;protein_id=WP_004145179.1;transl_table=11 NZ_CP085478.1 RefSeq gene 996914 997945 . + . ID=gene-LI478_RS05015;Name=yhjD;gbkey=Gene;gene=yhjD;gene_biotype=protein_coding;locus_tag=LI478_RS05015 NZ_CP085478.1 Protein Homology CDS 996914 997945 . + 0 ID=cds-WP_002921337.1;Parent=gene-LI478_RS05015;Dbxref=Genbank:WP_002921337.1;Name=WP_002921337.1;gbkey=CDS;gene=yhjD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229328.1;locus_tag=LI478_RS05015;product=inner membrane protein YhjD;protein_id=WP_002921337.1;transl_table=11 NZ_CP085478.1 RefSeq gene 998217 999539 . + . ID=gene-LI478_RS05020;Name=LI478_RS05020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS05020 NZ_CP085478.1 Protein Homology CDS 998217 999539 . + 0 ID=cds-WP_004150118.1;Parent=gene-LI478_RS05020;Dbxref=Genbank:WP_004150118.1;Name=WP_004150118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229329.1;locus_tag=LI478_RS05020;product=MFS transporter;protein_id=WP_004150118.1;transl_table=11 NZ_CP085478.1 RefSeq gene 999577 1001628 . - . ID=gene-LI478_RS05025;Name=LI478_RS05025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS05025 NZ_CP085478.1 Protein Homology CDS 999577 1001628 . - 0 ID=cds-WP_032421879.1;Parent=gene-LI478_RS05025;Dbxref=Genbank:WP_032421879.1;Name=WP_032421879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229330.1;locus_tag=LI478_RS05025;product=AsmA family protein;protein_id=WP_032421879.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1001823 1002752 . + . ID=gene-LI478_RS05030;Name=LI478_RS05030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS05030 NZ_CP085478.1 Protein Homology CDS 1001823 1002752 . + 0 ID=cds-WP_002921434.1;Parent=gene-LI478_RS05030;Dbxref=Genbank:WP_002921434.1;Name=WP_002921434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229332.1;locus_tag=LI478_RS05030;product=sugar kinase;protein_id=WP_002921434.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1002807 1004309 . - . ID=gene-LI478_RS05035;Name=LI478_RS05035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS05035 NZ_CP085478.1 Protein Homology CDS 1002807 1004309 . - 0 ID=cds-WP_002921436.1;Parent=gene-LI478_RS05035;Dbxref=Genbank:WP_002921436.1;Name=WP_002921436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229333.1;locus_tag=LI478_RS05035;product=pitrilysin family protein;protein_id=WP_002921436.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1004529 1005815 . - . ID=gene-LI478_RS05040;Name=LI478_RS05040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS05040 NZ_CP085478.1 Protein Homology CDS 1004529 1005815 . - 0 ID=cds-WP_002921438.1;Parent=gene-LI478_RS05040;Dbxref=Genbank:WP_002921438.1;Name=WP_002921438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229334.1;locus_tag=LI478_RS05040;product=dicarboxylate/amino acid:cation symporter;protein_id=WP_002921438.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1005972 1007978 . - . ID=gene-LI478_RS05045;Name=hmsP;gbkey=Gene;gene=hmsP;gene_biotype=protein_coding;locus_tag=LI478_RS05045 NZ_CP085478.1 Protein Homology CDS 1005972 1007978 . - 0 ID=cds-WP_019705040.1;Parent=gene-LI478_RS05045;Dbxref=Genbank:WP_019705040.1;Name=WP_019705040.1;Ontology_term=GO:0007165;gbkey=CDS;gene=hmsP;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229335.1;locus_tag=LI478_RS05045;product=biofilm formation regulator HmsP;protein_id=WP_019705040.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1008221 1011700 . - . ID=gene-LI478_RS05050;Name=bcsC;gbkey=Gene;gene=bcsC;gene_biotype=protein_coding;locus_tag=LI478_RS05050 NZ_CP085478.1 Protein Homology CDS 1008221 1011700 . - 0 ID=cds-WP_009484216.1;Parent=gene-LI478_RS05050;Dbxref=Genbank:WP_009484216.1;Name=WP_009484216.1;Ontology_term=GO:0030244,GO:0005515,GO:0019867;gbkey=CDS;gene=bcsC;go_component=outer membrane|0019867||IEA;go_function=protein binding|0005515||IEA;go_process=cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229337.1;locus_tag=LI478_RS05050;product=cellulose synthase complex outer membrane protein BcsC;protein_id=WP_009484216.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1011682 1012791 . - . ID=gene-LI478_RS05055;Name=bcsZ;gbkey=Gene;gene=bcsZ;gene_biotype=protein_coding;locus_tag=LI478_RS05055 NZ_CP085478.1 Protein Homology CDS 1011682 1012791 . - 0 ID=cds-WP_015959120.1;Parent=gene-LI478_RS05055;Dbxref=Genbank:WP_015959120.1;Name=WP_015959120.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=bcsZ;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229338.1;locus_tag=LI478_RS05055;product=cellulose synthase complex periplasmic endoglucanase BcsZ;protein_id=WP_015959120.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1012795 1015140 . - . ID=gene-LI478_RS05060;Name=bcsB;gbkey=Gene;gene=bcsB;gene_biotype=protein_coding;locus_tag=LI478_RS05060 NZ_CP085478.1 Protein Homology CDS 1012795 1015140 . - 0 ID=cds-WP_071591898.1;Parent=gene-LI478_RS05060;Dbxref=Genbank:WP_071591898.1;Name=WP_071591898.1;gbkey=CDS;gene=bcsB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229339.1;locus_tag=LI478_RS05060;product=cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB;protein_id=WP_071591898.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1015151 1017769 . - . ID=gene-LI478_RS05065;Name=bcsA;gbkey=Gene;gene=bcsA;gene_biotype=protein_coding;locus_tag=LI478_RS05065 NZ_CP085478.1 Protein Homology CDS 1015151 1017769 . - 0 ID=cds-WP_064153055.1;Parent=gene-LI478_RS05065;Dbxref=Genbank:WP_064153055.1;Name=WP_064153055.1;Ontology_term=GO:0006011,GO:0030244,GO:0016760,GO:0035438,GO:0016020;gbkey=CDS;gene=bcsA;go_component=membrane|0016020||IEA;go_function=cellulose synthase (UDP-forming) activity|0016760||IEA,cyclic-di-GMP binding|0035438||IEA;go_process=UDP-glucose metabolic process|0006011||IEA,cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229340.1;locus_tag=LI478_RS05065;product=UDP-forming cellulose synthase catalytic subunit;protein_id=WP_064153055.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1017766 1018497 . - . ID=gene-LI478_RS05070;Name=bcsQ;gbkey=Gene;gene=bcsQ;gene_biotype=protein_coding;locus_tag=LI478_RS05070 NZ_CP085478.1 Protein Homology CDS 1017766 1018497 . - 0 ID=cds-WP_002921510.1;Parent=gene-LI478_RS05070;Dbxref=Genbank:WP_002921510.1;Name=WP_002921510.1;gbkey=CDS;gene=bcsQ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229341.1;locus_tag=LI478_RS05070;product=cellulose biosynthesis protein BcsQ;protein_id=WP_002921510.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1018509 1018697 . - . ID=gene-LI478_RS05075;Name=bcsR;gbkey=Gene;gene=bcsR;gene_biotype=protein_coding;locus_tag=LI478_RS05075 NZ_CP085478.1 Protein Homology CDS 1018509 1018697 . - 0 ID=cds-WP_002921513.1;Parent=gene-LI478_RS05075;Dbxref=Genbank:WP_002921513.1;Name=WP_002921513.1;gbkey=CDS;gene=bcsR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229342.1;locus_tag=LI478_RS05075;product=cellulose biosynthesis protein BcsR;protein_id=WP_002921513.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1018866 1020419 . + . ID=gene-LI478_RS05080;Name=bcsE;gbkey=Gene;gene=bcsE;gene_biotype=protein_coding;locus_tag=LI478_RS05080 NZ_CP085478.1 Protein Homology CDS 1018866 1020419 . + 0 ID=cds-WP_029884433.1;Parent=gene-LI478_RS05080;Dbxref=Genbank:WP_029884433.1;Name=WP_029884433.1;gbkey=CDS;gene=bcsE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229343.1;locus_tag=LI478_RS05080;product=cellulose biosynthesis protein BcsE;protein_id=WP_029884433.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1020419 1020616 . + . ID=gene-LI478_RS05085;Name=bcsF;gbkey=Gene;gene=bcsF;gene_biotype=protein_coding;locus_tag=LI478_RS05085 NZ_CP085478.1 Protein Homology CDS 1020419 1020616 . + 0 ID=cds-WP_004901215.1;Parent=gene-LI478_RS05085;Dbxref=Genbank:WP_004901215.1;Name=WP_004901215.1;Ontology_term=GO:0052324,GO:0003674,GO:0005575;gbkey=CDS;gene=bcsF;go_component=cellular_component|0005575||IEA;go_function=molecular_function|0003674||IEA;go_process=plant-type cell wall cellulose biosynthetic process|0052324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229344.1;locus_tag=LI478_RS05085;product=cellulose biosynthesis protein BcsF;protein_id=WP_004901215.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1020613 1022292 . + . ID=gene-LI478_RS05090;Name=bcsG;gbkey=Gene;gene=bcsG;gene_biotype=protein_coding;locus_tag=LI478_RS05090 NZ_CP085478.1 Protein Homology CDS 1020613 1022292 . + 0 ID=cds-WP_004173944.1;Parent=gene-LI478_RS05090;Dbxref=Genbank:WP_004173944.1;Name=WP_004173944.1;Ontology_term=GO:0030244,GO:0003674,GO:0005575;gbkey=CDS;gene=bcsG;go_component=cellular_component|0005575||IEA;go_function=molecular_function|0003674||IEA;go_process=cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229345.1;locus_tag=LI478_RS05090;product=cellulose biosynthesis protein BcsG;protein_id=WP_004173944.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1022400 1023401 . - . ID=gene-LI478_RS05095;Name=LI478_RS05095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS05095 NZ_CP085478.1 Protein Homology CDS 1022400 1023401 . - 0 ID=cds-WP_002921526.1;Parent=gene-LI478_RS05095;Dbxref=Genbank:WP_002921526.1;Name=WP_002921526.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229346.1;locus_tag=LI478_RS05095;product=glycosyl hydrolase family 8;protein_id=WP_002921526.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1023413 1023889 . - . ID=gene-LI478_RS05100;Name=LI478_RS05100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS05100 NZ_CP085478.1 Protein Homology CDS 1023413 1023889 . - 0 ID=cds-WP_002921529.1;Parent=gene-LI478_RS05100;Dbxref=Genbank:WP_002921529.1;Name=WP_002921529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229347.1;locus_tag=LI478_RS05100;product=hypothetical protein;protein_id=WP_002921529.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1023889 1027941 . - . ID=gene-LI478_RS05105;Name=LI478_RS05105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS05105 NZ_CP085478.1 Protein Homology CDS 1023889 1027941 . - 0 ID=cds-WP_004901221.1;Parent=gene-LI478_RS05105;Dbxref=Genbank:WP_004901221.1;Name=WP_004901221.1;Ontology_term=GO:0030244,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_process=cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229348.1;locus_tag=LI478_RS05105;product=cellulose biosynthesis protein BcsC;protein_id=WP_004901221.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1027938 1030373 . - . ID=gene-LI478_RS05110;Name=bcsB;gbkey=Gene;gene=bcsB;gene_biotype=protein_coding;locus_tag=LI478_RS05110 NZ_CP085478.1 Protein Homology CDS 1027938 1030373 . - 0 ID=cds-WP_014599279.1;Parent=gene-LI478_RS05110;Dbxref=Genbank:WP_014599279.1;Name=WP_014599279.1;gbkey=CDS;gene=bcsB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229349.1;locus_tag=LI478_RS05110;product=cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB;protein_id=WP_014599279.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1030370 1032481 . - . ID=gene-LI478_RS05115;Name=bcsA;gbkey=Gene;gene=bcsA;gene_biotype=protein_coding;locus_tag=LI478_RS05115 NZ_CP085478.1 Protein Homology CDS 1030370 1032481 . - 0 ID=cds-WP_004901226.1;Parent=gene-LI478_RS05115;Dbxref=Genbank:WP_004901226.1;Name=WP_004901226.1;Ontology_term=GO:0006011,GO:0030244,GO:0016759,GO:0035438;gbkey=CDS;gene=bcsA;go_function=cellulose synthase activity|0016759||IEA,cyclic-di-GMP binding|0035438||IEA;go_process=UDP-glucose metabolic process|0006011||IEA,cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229350.1;locus_tag=LI478_RS05115;product=UDP-forming cellulose synthase catalytic subunit;protein_id=WP_004901226.1;transl_table=11 NZ_CP085478.1 RefSeq pseudogene 1032501 1033293 . - . ID=gene-LI478_RS05120;Name=LI478_RS05120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS05120;pseudo=true NZ_CP085478.1 Protein Homology CDS 1032501 1033293 . - 0 ID=cds-LI478_RS05120;Parent=gene-LI478_RS05120;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229351.1;locus_tag=LI478_RS05120;product=AAA family ATPase;pseudo=true;transl_table=11 NZ_CP085478.1 RefSeq gene 1033295 1033834 . - . ID=gene-LI478_RS05125;Name=bcsO;gbkey=Gene;gene=bcsO;gene_biotype=protein_coding;locus_tag=LI478_RS05125 NZ_CP085478.1 Protein Homology CDS 1033295 1033834 . - 0 ID=cds-WP_004901229.1;Parent=gene-LI478_RS05125;Dbxref=Genbank:WP_004901229.1;Name=WP_004901229.1;gbkey=CDS;gene=bcsO;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229352.1;locus_tag=LI478_RS05125;product=cellulose biosynthesis protein BcsO;protein_id=WP_004901229.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1034151 1034330 . - . ID=gene-LI478_RS05130;Name=LI478_RS05130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS05130 NZ_CP085478.1 Protein Homology CDS 1034151 1034330 . - 0 ID=cds-WP_004145206.1;Parent=gene-LI478_RS05130;Dbxref=Genbank:WP_004145206.1;Name=WP_004145206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229353.1;locus_tag=LI478_RS05130;product=hypothetical protein;protein_id=WP_004145206.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1034349 1035362 . - . ID=gene-LI478_RS05135;Name=dppF;gbkey=Gene;gene=dppF;gene_biotype=protein_coding;locus_tag=LI478_RS05135 NZ_CP085478.1 Protein Homology CDS 1034349 1035362 . - 0 ID=cds-WP_064153054.1;Parent=gene-LI478_RS05135;Dbxref=Genbank:WP_064153054.1;Name=WP_064153054.1;gbkey=CDS;gene=dppF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229354.1;locus_tag=LI478_RS05135;product=dipeptide ABC transporter ATP-binding subunit DppF;protein_id=WP_064153054.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1035359 1036342 . - . ID=gene-LI478_RS05140;Name=dppD;gbkey=Gene;gene=dppD;gene_biotype=protein_coding;locus_tag=LI478_RS05140 NZ_CP085478.1 Protein Homology CDS 1035359 1036342 . - 0 ID=cds-WP_002921785.1;Parent=gene-LI478_RS05140;Dbxref=Genbank:WP_002921785.1;Name=WP_002921785.1;Ontology_term=GO:0015833,GO:0000166,GO:0005524;gbkey=CDS;gene=dppD;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229355.1;locus_tag=LI478_RS05140;product=dipeptide ABC transporter ATP-binding protein;protein_id=WP_002921785.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1036353 1037255 . - . ID=gene-LI478_RS05145;Name=dppC;gbkey=Gene;gene=dppC;gene_biotype=protein_coding;locus_tag=LI478_RS05145 NZ_CP085478.1 Protein Homology CDS 1036353 1037255 . - 0 ID=cds-WP_004145207.1;Parent=gene-LI478_RS05145;Dbxref=Genbank:WP_004145207.1;Name=WP_004145207.1;Ontology_term=GO:0055085;gbkey=CDS;gene=dppC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010426221.1;locus_tag=LI478_RS05145;product=dipeptide ABC transporter permease DppC;protein_id=WP_004145207.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1037265 1038284 . - . ID=gene-LI478_RS05150;Name=dppB;gbkey=Gene;gene=dppB;gene_biotype=protein_coding;locus_tag=LI478_RS05150 NZ_CP085478.1 Protein Homology CDS 1037265 1038284 . - 0 ID=cds-WP_002921786.1;Parent=gene-LI478_RS05150;Dbxref=Genbank:WP_002921786.1;Name=WP_002921786.1;gbkey=CDS;gene=dppB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133865.1;locus_tag=LI478_RS05150;product=dipeptide ABC transporter permease DppB;protein_id=WP_002921786.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1038419 1040026 . - . ID=gene-LI478_RS05155;Name=LI478_RS05155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS05155 NZ_CP085478.1 Protein Homology CDS 1038419 1040026 . - 0 ID=cds-WP_002921789.1;Parent=gene-LI478_RS05155;Dbxref=Genbank:WP_002921789.1;Name=WP_002921789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462532.1;locus_tag=LI478_RS05155;product=ABC transporter substrate-binding protein;protein_id=WP_002921789.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1040742 1040875 . - . ID=gene-LI478_RS05160;Name=LI478_RS05160;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LI478_RS05160 NZ_CP085478.1 cmsearch ncRNA 1040742 1040875 . - . ID=rna-LI478_RS05160;Parent=gene-LI478_RS05160;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LI478_RS05160;product=RtT sRNA NZ_CP085478.1 cmsearch exon 1040742 1040875 . - . ID=exon-LI478_RS05160-1;Parent=rna-LI478_RS05160;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LI478_RS05160;product=RtT sRNA NZ_CP085478.1 RefSeq gene 1040909 1041041 . - . ID=gene-LI478_RS05165;Name=LI478_RS05165;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LI478_RS05165 NZ_CP085478.1 cmsearch ncRNA 1040909 1041041 . - . ID=rna-LI478_RS05165;Parent=gene-LI478_RS05165;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LI478_RS05165;product=RtT sRNA NZ_CP085478.1 cmsearch exon 1040909 1041041 . - . ID=exon-LI478_RS05165-1;Parent=rna-LI478_RS05165;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LI478_RS05165;product=RtT sRNA NZ_CP085478.1 RefSeq gene 1041076 1041152 . - . ID=gene-LI478_RS05170;Name=LI478_RS05170;gbkey=Gene;gene_biotype=tRNA;locus_tag=LI478_RS05170 NZ_CP085478.1 tRNAscan-SE tRNA 1041076 1041152 . - . ID=rna-LI478_RS05170;Parent=gene-LI478_RS05170;anticodon=(pos:complement(1041116..1041118));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS05170;product=tRNA-Pro NZ_CP085478.1 tRNAscan-SE exon 1041076 1041152 . - . ID=exon-LI478_RS05170-1;Parent=rna-LI478_RS05170;anticodon=(pos:complement(1041116..1041118));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS05170;product=tRNA-Pro NZ_CP085478.1 RefSeq gene 1041272 1042666 . - . ID=gene-LI478_RS05175;Name=LI478_RS05175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS05175 NZ_CP085478.1 Protein Homology CDS 1041272 1042666 . - 0 ID=cds-WP_064153053.1;Parent=gene-LI478_RS05175;Dbxref=Genbank:WP_064153053.1;Name=WP_064153053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229361.1;locus_tag=LI478_RS05175;product=ankyrin repeat domain-containing protein;protein_id=WP_064153053.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1042858 1044531 . - . ID=gene-LI478_RS05180;Name=eptB;gbkey=Gene;gene=eptB;gene_biotype=protein_coding;locus_tag=LI478_RS05180 NZ_CP085478.1 Protein Homology CDS 1042858 1044531 . - 0 ID=cds-WP_004152427.1;Parent=gene-LI478_RS05180;Dbxref=Genbank:WP_004152427.1;Name=WP_004152427.1;Ontology_term=GO:0008484;gbkey=CDS;gene=eptB;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229362.1;locus_tag=LI478_RS05180;product=kdo(2)-lipid A phosphoethanolamine 7''-transferase;protein_id=WP_004152427.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1044774 1045979 . - . ID=gene-LI478_RS05185;Name=LI478_RS05185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS05185 NZ_CP085478.1 Protein Homology CDS 1044774 1045979 . - 0 ID=cds-WP_002921907.1;Parent=gene-LI478_RS05185;Dbxref=Genbank:WP_002921907.1;Name=WP_002921907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229363.1;locus_tag=LI478_RS05185;product=MFS transporter;protein_id=WP_002921907.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1046221 1046802 . - . ID=gene-LI478_RS05190;Name=LI478_RS05190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS05190 NZ_CP085478.1 Protein Homology CDS 1046221 1046802 . - 0 ID=cds-WP_020803959.1;Parent=gene-LI478_RS05190;Dbxref=Genbank:WP_020803959.1;Name=WP_020803959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229364.1;locus_tag=LI478_RS05190;product=hypothetical protein;protein_id=WP_020803959.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1047008 1047589 . + . ID=gene-LI478_RS05195;Name=tag;gbkey=Gene;gene=tag;gene_biotype=protein_coding;locus_tag=LI478_RS05195 NZ_CP085478.1 Protein Homology CDS 1047008 1047589 . + 0 ID=cds-WP_002921914.1;Parent=gene-LI478_RS05195;Dbxref=Genbank:WP_002921914.1;Name=WP_002921914.1;gbkey=CDS;gene=tag;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229365.1;locus_tag=LI478_RS05195;product=DNA-3-methyladenine glycosylase I;protein_id=WP_002921914.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1047567 1048007 . + . ID=gene-LI478_RS05200;Name=LI478_RS05200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS05200 NZ_CP085478.1 Protein Homology CDS 1047567 1048007 . + 0 ID=cds-WP_004181509.1;Parent=gene-LI478_RS05200;Dbxref=Genbank:WP_004181509.1;Name=WP_004181509.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229366.1;locus_tag=LI478_RS05200;product=N-acetyltransferase;protein_id=WP_004181509.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1047976 1050306 . - . ID=gene-LI478_RS05205;Name=LI478_RS05205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS05205 NZ_CP085478.1 Protein Homology CDS 1047976 1050306 . - 0 ID=cds-WP_064153052.1;Parent=gene-LI478_RS05205;Dbxref=Genbank:WP_064153052.1;Name=WP_064153052.1;Ontology_term=GO:0016491,GO:0043546;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,molybdopterin cofactor binding|0043546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229367.1;locus_tag=LI478_RS05205;product=molybdopterin guanine dinucleotide-containing S/N-oxide reductase;protein_id=WP_064153052.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1050474 1051136 . + . ID=gene-LI478_RS05210;Name=LI478_RS05210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS05210 NZ_CP085478.1 Protein Homology CDS 1050474 1051136 . + 0 ID=cds-WP_002921917.1;Parent=gene-LI478_RS05210;Dbxref=Genbank:WP_002921917.1;Name=WP_002921917.1;Ontology_term=GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229368.1;locus_tag=LI478_RS05210;product=OmpA family lipoprotein;protein_id=WP_002921917.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1051240 1052256 . + . ID=gene-LI478_RS05215;Name=LI478_RS05215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS05215 NZ_CP085478.1 Protein Homology CDS 1051240 1052256 . + 0 ID=cds-WP_002921918.1;Parent=gene-LI478_RS05215;Dbxref=Genbank:WP_002921918.1;Name=WP_002921918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229370.1;locus_tag=LI478_RS05215;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_002921918.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1052368 1053117 . + . ID=gene-LI478_RS05220;Name=LI478_RS05220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS05220 NZ_CP085478.1 Protein Homology CDS 1052368 1053117 . + 0 ID=cds-WP_002921919.1;Parent=gene-LI478_RS05220;Dbxref=Genbank:WP_002921919.1;Name=WP_002921919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229371.1;locus_tag=LI478_RS05220;product=hypothetical protein;protein_id=WP_002921919.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1053121 1054056 . + . ID=gene-LI478_RS05225;Name=LI478_RS05225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS05225 NZ_CP085478.1 Protein Homology CDS 1053121 1054056 . + 0 ID=cds-WP_002921921.1;Parent=gene-LI478_RS05225;Dbxref=Genbank:WP_002921921.1;Name=WP_002921921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229372.1;locus_tag=LI478_RS05225;product=sugar kinase;protein_id=WP_002921921.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1054161 1055441 . + . ID=gene-LI478_RS05230;Name=LI478_RS05230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS05230 NZ_CP085478.1 Protein Homology CDS 1054161 1055441 . + 0 ID=cds-WP_002921927.1;Parent=gene-LI478_RS05230;Dbxref=Genbank:WP_002921927.1;Name=WP_002921927.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229373.1;locus_tag=LI478_RS05230;product=MFS transporter;protein_id=WP_002921927.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1055466 1056437 . + . ID=gene-LI478_RS05235;Name=ghrB;gbkey=Gene;gene=ghrB;gene_biotype=protein_coding;locus_tag=LI478_RS05235 NZ_CP085478.1 Protein Homology CDS 1055466 1056437 . + 0 ID=cds-WP_004145219.1;Parent=gene-LI478_RS05235;Dbxref=Genbank:WP_004145219.1;Name=WP_004145219.1;Ontology_term=GO:0016616,GO:0051287;gbkey=CDS;gene=ghrB;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229374.1;locus_tag=LI478_RS05235;product=glyoxylate/hydroxypyruvate reductase GhrB;protein_id=WP_004145219.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1056546 1057256 . - . ID=gene-LI478_RS05240;Name=LI478_RS05240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS05240 NZ_CP085478.1 Protein Homology CDS 1056546 1057256 . - 0 ID=cds-WP_002921929.1;Parent=gene-LI478_RS05240;Dbxref=Genbank:WP_002921929.1;Name=WP_002921929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229375.1;locus_tag=LI478_RS05240;product=DUF3053 domain-containing protein;protein_id=WP_002921929.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1057697 1059052 . + . ID=gene-LI478_RS05245;Name=LI478_RS05245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS05245 NZ_CP085478.1 Protein Homology CDS 1057697 1059052 . + 0 ID=cds-WP_032415797.1;Parent=gene-LI478_RS05245;Dbxref=Genbank:WP_032415797.1;Name=WP_032415797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229376.1;locus_tag=LI478_RS05245;product=aromatic acid/H+ symport family MFS transporter;protein_id=WP_032415797.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1059298 1059588 . + . ID=gene-LI478_RS05250;Name=LI478_RS05250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS05250 NZ_CP085478.1 Protein Homology CDS 1059298 1059588 . + 0 ID=cds-WP_002921931.1;Parent=gene-LI478_RS05250;Dbxref=Genbank:WP_002921931.1;Name=WP_002921931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229377.1;locus_tag=LI478_RS05250;product=HTH-type transcriptional regulator;protein_id=WP_002921931.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1059841 1060053 . + . ID=gene-LI478_RS05255;Name=cspA;gbkey=Gene;gene=cspA;gene_biotype=protein_coding;locus_tag=LI478_RS05255 NZ_CP085478.1 Protein Homology CDS 1059841 1060053 . + 0 ID=cds-WP_000014594.1;Parent=gene-LI478_RS05255;Dbxref=Genbank:WP_000014594.1;Name=WP_000014594.1;gbkey=CDS;gene=cspA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312468.1;locus_tag=LI478_RS05255;product=RNA chaperone/antiterminator CspA;protein_id=WP_000014594.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1060152 1061771 . - . ID=gene-LI478_RS05260;Name=LI478_RS05260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS05260 NZ_CP085478.1 Protein Homology CDS 1060152 1061771 . - 0 ID=cds-WP_032415799.1;Parent=gene-LI478_RS05260;Dbxref=Genbank:WP_032415799.1;Name=WP_032415799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229379.1;locus_tag=LI478_RS05260;product=ABC-F family ATP-binding cassette domain-containing protein;protein_id=WP_032415799.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1062073 1062225 . - . ID=gene-LI478_RS05265;Name=hokA;gbkey=Gene;gene=hokA;gene_biotype=protein_coding;locus_tag=LI478_RS05265 NZ_CP085478.1 Protein Homology CDS 1062073 1062225 . - 0 ID=cds-WP_002922102.1;Parent=gene-LI478_RS05265;Dbxref=Genbank:WP_002922102.1;Name=WP_002922102.1;gbkey=CDS;gene=hokA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229380.1;locus_tag=LI478_RS05265;product=type I toxin-antitoxin system toxin HokA;protein_id=WP_002922102.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1062569 1063054 . - . ID=gene-LI478_RS05270;Name=LI478_RS05270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS05270 NZ_CP085478.1 Protein Homology CDS 1062569 1063054 . - 0 ID=cds-WP_021312536.1;Parent=gene-LI478_RS05270;Dbxref=Genbank:WP_021312536.1;Name=WP_021312536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462552.1;locus_tag=LI478_RS05270;product=GNAT family N-acetyltransferase;protein_id=WP_021312536.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1063042 1063308 . - . ID=gene-LI478_RS05275;Name=LI478_RS05275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS05275 NZ_CP085478.1 Protein Homology CDS 1063042 1063308 . - 0 ID=cds-WP_003026799.1;Parent=gene-LI478_RS05275;Dbxref=Genbank:WP_003026799.1;Name=WP_003026799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004213599.1;locus_tag=LI478_RS05275;product=DUF1778 domain-containing protein;protein_id=WP_003026799.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1063441 1063869 . - . ID=gene-LI478_RS05280;Name=LI478_RS05280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS05280 NZ_CP085478.1 Protein Homology CDS 1063441 1063869 . - 0 ID=cds-WP_004901287.1;Parent=gene-LI478_RS05280;Dbxref=Genbank:WP_004901287.1;Name=WP_004901287.1;Ontology_term=GO:0016846;gbkey=CDS;go_function=carbon-sulfur lyase activity|0016846||IEA;inference=COORDINATES: protein motif:HMM:NF016701.2;locus_tag=LI478_RS05280;product=GFA family protein;protein_id=WP_004901287.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1064070 1065439 . - . ID=gene-LI478_RS05285;Name=LI478_RS05285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS05285 NZ_CP085478.1 Protein Homology CDS 1064950 1065439 . - 0 ID=cds-WP_087830479.1;Parent=gene-LI478_RS05285;Dbxref=Genbank:WP_087830479.1;Name=WP_087830479.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611947.1;locus_tag=LI478_RS05285;product=IS3 family transposase;protein_id=WP_087830479.1;transl_table=11 NZ_CP085478.1 Protein Homology CDS 1064070 1064950 . - 2 ID=cds-WP_087830479.1;Parent=gene-LI478_RS05285;Dbxref=Genbank:WP_087830479.1;Name=WP_087830479.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611947.1;locus_tag=LI478_RS05285;product=IS3 family transposase;protein_id=WP_087830479.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1065736 1067805 . - . ID=gene-LI478_RS05290;Name=glyS;gbkey=Gene;gene=glyS;gene_biotype=protein_coding;locus_tag=LI478_RS05290 NZ_CP085478.1 Protein Homology CDS 1065736 1067805 . - 0 ID=cds-WP_002922127.1;Parent=gene-LI478_RS05290;Dbxref=Genbank:WP_002922127.1;Name=WP_002922127.1;Ontology_term=GO:0006426,GO:0004820,GO:0009345;gbkey=CDS;gene=glyS;go_component=glycine-tRNA ligase complex|0009345||IEA;go_function=glycine-tRNA ligase activity|0004820||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001291772.1;locus_tag=LI478_RS05290;product=glycine--tRNA ligase subunit beta;protein_id=WP_002922127.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1067815 1068726 . - . ID=gene-LI478_RS05295;Name=glyQ;gbkey=Gene;gene=glyQ;gene_biotype=protein_coding;locus_tag=LI478_RS05295 NZ_CP085478.1 Protein Homology CDS 1067815 1068726 . - 0 ID=cds-WP_002922128.1;Parent=gene-LI478_RS05295;Dbxref=Genbank:WP_002922128.1;Name=WP_002922128.1;Ontology_term=GO:0006426,GO:0004820,GO:0009345;gbkey=CDS;gene=glyQ;go_component=glycine-tRNA ligase complex|0009345||IEA;go_function=glycine-tRNA ligase activity|0004820||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229382.1;locus_tag=LI478_RS05295;product=glycine--tRNA ligase subunit alpha;protein_id=WP_002922128.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1068854 1069153 . - . ID=gene-LI478_RS05300;Name=LI478_RS05300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS05300 NZ_CP085478.1 Protein Homology CDS 1068854 1069153 . - 0 ID=cds-WP_002922129.1;Parent=gene-LI478_RS05300;Dbxref=Genbank:WP_002922129.1;Name=WP_002922129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229383.1;locus_tag=LI478_RS05300;product=YsaB family lipoprotein;protein_id=WP_002922129.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1069333 1070328 . + . ID=gene-LI478_RS05305;Name=LI478_RS05305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS05305 NZ_CP085478.1 Protein Homology CDS 1069333 1070328 . + 0 ID=cds-WP_016946692.1;Parent=gene-LI478_RS05305;Dbxref=Genbank:WP_016946692.1;Name=WP_016946692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229384.1;locus_tag=LI478_RS05305;product=acyltransferase;protein_id=WP_016946692.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1070355 1070801 . - . ID=gene-LI478_RS05310;Name=yiaA;gbkey=Gene;gene=yiaA;gene_biotype=protein_coding;locus_tag=LI478_RS05310 NZ_CP085478.1 Protein Homology CDS 1070355 1070801 . - 0 ID=cds-WP_004188180.1;Parent=gene-LI478_RS05310;Dbxref=Genbank:WP_004188180.1;Name=WP_004188180.1;gbkey=CDS;gene=yiaA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229385.1;locus_tag=LI478_RS05310;product=inner membrane protein YiaA;protein_id=WP_004188180.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1070833 1071204 . - . ID=gene-LI478_RS05315;Name=yiaB;gbkey=Gene;gene=yiaB;gene_biotype=protein_coding;locus_tag=LI478_RS05315 NZ_CP085478.1 Protein Homology CDS 1070833 1071204 . - 0 ID=cds-WP_002922133.1;Parent=gene-LI478_RS05315;Dbxref=Genbank:WP_002922133.1;Name=WP_002922133.1;gbkey=CDS;gene=yiaB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229386.1;locus_tag=LI478_RS05315;product=inner membrane protein YiaB;protein_id=WP_002922133.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1071373 1072827 . - . ID=gene-LI478_RS05320;Name=xylB;gbkey=Gene;gene=xylB;gene_biotype=protein_coding;locus_tag=LI478_RS05320 NZ_CP085478.1 Protein Homology CDS 1071373 1072827 . - 0 ID=cds-WP_227394174.1;Parent=gene-LI478_RS05320;Dbxref=Genbank:WP_227394174.1;Name=WP_227394174.1;Ontology_term=GO:0005997,GO:0004856;gbkey=CDS;gene=xylB;go_function=xylulokinase activity|0004856||IEA;go_process=xylulose metabolic process|0005997||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229387.1;locus_tag=LI478_RS05320;product=xylulokinase;protein_id=WP_227394174.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1072920 1074242 . - . ID=gene-LI478_RS05325;Name=xylA;gbkey=Gene;gene=xylA;gene_biotype=protein_coding;locus_tag=LI478_RS05325 NZ_CP085478.1 Protein Homology CDS 1072920 1074242 . - 0 ID=cds-WP_002922139.1;Parent=gene-LI478_RS05325;Dbxref=Genbank:WP_002922139.1;Name=WP_002922139.1;Ontology_term=GO:0006098,GO:0042732,GO:0000287,GO:0009045;gbkey=CDS;gene=xylA;go_function=magnesium ion binding|0000287||IEA,xylose isomerase activity|0009045||IEA;go_process=pentose-phosphate shunt|0006098||IEA,D-xylose metabolic process|0042732||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229388.1;locus_tag=LI478_RS05325;product=xylose isomerase;protein_id=WP_002922139.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1074737 1075732 . + . ID=gene-LI478_RS05330;Name=xylF;gbkey=Gene;gene=xylF;gene_biotype=protein_coding;locus_tag=LI478_RS05330 NZ_CP085478.1 Protein Homology CDS 1074737 1075732 . + 0 ID=cds-WP_004152040.1;Parent=gene-LI478_RS05330;Dbxref=Genbank:WP_004152040.1;Name=WP_004152040.1;Ontology_term=GO:0015753;gbkey=CDS;gene=xylF;go_process=D-xylose transmembrane transport|0015753||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418023.1;locus_tag=LI478_RS05330;product=D-xylose ABC transporter substrate-binding protein;protein_id=WP_004152040.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1075797 1077338 . + . ID=gene-LI478_RS05335;Name=LI478_RS05335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS05335 NZ_CP085478.1 Protein Homology CDS 1075797 1077338 . + 0 ID=cds-WP_064153051.1;Parent=gene-LI478_RS05335;Dbxref=Genbank:WP_064153051.1;Name=WP_064153051.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229390.1;locus_tag=LI478_RS05335;product=xylose ABC transporter ATP-binding protein;protein_id=WP_064153051.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1077316 1078497 . + . ID=gene-LI478_RS05340;Name=gguB;gbkey=Gene;gene=gguB;gene_biotype=protein_coding;locus_tag=LI478_RS05340 NZ_CP085478.1 Protein Homology CDS 1077316 1078497 . + 0 ID=cds-WP_002922349.1;Parent=gene-LI478_RS05340;Dbxref=Genbank:WP_002922349.1;Name=WP_002922349.1;Ontology_term=GO:0043190;gbkey=CDS;gene=gguB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229391.1;locus_tag=LI478_RS05340;product=sugar ABC transporter permease;protein_id=WP_002922349.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1078730 1079908 . + . ID=gene-LI478_RS05345;Name=LI478_RS05345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS05345 NZ_CP085478.1 Protein Homology CDS 1078730 1079908 . + 0 ID=cds-WP_004145231.1;Parent=gene-LI478_RS05345;Dbxref=Genbank:WP_004145231.1;Name=WP_004145231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229392.1;locus_tag=LI478_RS05345;product=XylR family transcriptional regulator;protein_id=WP_004145231.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1079947 1080765 . - . ID=gene-LI478_RS05350;Name=LI478_RS05350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS05350 NZ_CP085478.1 Protein Homology CDS 1079947 1080765 . - 0 ID=cds-WP_004188166.1;Parent=gene-LI478_RS05350;Dbxref=Genbank:WP_004188166.1;Name=WP_004188166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026230.1;locus_tag=LI478_RS05350;product=protein bax;protein_id=WP_004188166.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1081080 1083113 . + . ID=gene-LI478_RS05355;Name=LI478_RS05355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS05355 NZ_CP085478.1 Protein Homology CDS 1081080 1083113 . + 0 ID=cds-WP_064153050.1;Parent=gene-LI478_RS05355;Dbxref=Genbank:WP_064153050.1;Name=WP_064153050.1;Ontology_term=GO:0004556;gbkey=CDS;go_function=alpha-amylase activity|0004556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229394.1;locus_tag=LI478_RS05355;product=alpha-amylase;protein_id=WP_064153050.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1083282 1084538 . + . ID=gene-LI478_RS05360;Name=avtA;gbkey=Gene;gene=avtA;gene_biotype=protein_coding;locus_tag=LI478_RS05360 NZ_CP085478.1 Protein Homology CDS 1083282 1084538 . + 0 ID=cds-WP_002922359.1;Parent=gene-LI478_RS05360;Dbxref=Genbank:WP_002922359.1;Name=WP_002922359.1;gbkey=CDS;gene=avtA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229395.1;locus_tag=LI478_RS05360;product=valine--pyruvate transaminase;protein_id=WP_002922359.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1084581 1085066 . - . ID=gene-LI478_RS05365;Name=LI478_RS05365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS05365 NZ_CP085478.1 Protein Homology CDS 1084581 1085066 . - 0 ID=cds-WP_002922360.1;Parent=gene-LI478_RS05365;Dbxref=Genbank:WP_002922360.1;Name=WP_002922360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229396.1;locus_tag=LI478_RS05365;product=4Fe-4S binding protein;protein_id=WP_002922360.1;transl_table=11 NZ_CP085478.1 RefSeq pseudogene 1085176 1085268 . - . ID=gene-LI478_RS05370;Name=LI478_RS05370;end_range=1085268,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS05370;partial=true;pseudo=true NZ_CP085478.1 Protein Homology CDS 1085176 1085268 . - 0 ID=cds-LI478_RS05370;Parent=gene-LI478_RS05370;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1085268,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012540327.1;locus_tag=LI478_RS05370;partial=true;product=IclR family transcriptional regulator;pseudo=true;transl_table=11 NZ_CP085478.1 RefSeq gene 1085311 1087152 . - . ID=gene-LI478_RS05375;Name=selB;gbkey=Gene;gene=selB;gene_biotype=protein_coding;locus_tag=LI478_RS05375 NZ_CP085478.1 Protein Homology CDS 1085311 1087152 . - 0 ID=cds-WP_004173923.1;Parent=gene-LI478_RS05375;Dbxref=Genbank:WP_004173923.1;Name=WP_004173923.1;Ontology_term=GO:0001514,GO:0003723,GO:0003746,GO:0003924,GO:0005525;gbkey=CDS;gene=selB;go_function=RNA binding|0003723||IEA,translation elongation factor activity|0003746||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=selenocysteine incorporation|0001514||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229397.1;locus_tag=LI478_RS05375;product=selenocysteine-specific translation elongation factor;protein_id=WP_004173923.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1087149 1088537 . - . ID=gene-LI478_RS05380;Name=selA;gbkey=Gene;gene=selA;gene_biotype=protein_coding;locus_tag=LI478_RS05380 NZ_CP085478.1 Protein Homology CDS 1087149 1088537 . - 0 ID=cds-WP_159204621.1;Parent=gene-LI478_RS05380;Dbxref=Genbank:WP_159204621.1;Name=WP_159204621.1;Ontology_term=GO:0016260,GO:0004125;gbkey=CDS;gene=selA;go_function=L-seryl-tRNASec selenium transferase activity|0004125||IEA;go_process=selenocysteine biosynthetic process|0016260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229398.1;locus_tag=LI478_RS05380;product=L-seryl-tRNA(Sec) selenium transferase;protein_id=WP_159204621.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1088643 1089251 . - . ID=gene-LI478_RS05385;Name=LI478_RS05385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS05385 NZ_CP085478.1 Protein Homology CDS 1088643 1089251 . - 0 ID=cds-WP_004145238.1;Parent=gene-LI478_RS05385;Dbxref=Genbank:WP_004145238.1;Name=WP_004145238.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229399.1;locus_tag=LI478_RS05385;product=glutathione S-transferase;protein_id=WP_004145238.1;transl_table=11 NZ_CP085478.1 RefSeq pseudogene 1089358 1089489 . - . ID=gene-LI478_RS05390;Name=LI478_RS05390;end_range=1089489,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS05390;partial=true;pseudo=true NZ_CP085478.1 Protein Homology CDS 1089358 1089489 . - 0 ID=cds-LI478_RS05390;Parent=gene-LI478_RS05390;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1089489,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709371.1;locus_tag=LI478_RS05390;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP085478.1 RefSeq gene 1090219 1092126 . + . ID=gene-LI478_RS05395;Name=mtlA;gbkey=Gene;gene=mtlA;gene_biotype=protein_coding;locus_tag=LI478_RS05395 NZ_CP085478.1 Protein Homology CDS 1090219 1092126 . + 0 ID=cds-WP_032103601.1;Parent=gene-LI478_RS05395;Dbxref=Genbank:WP_032103601.1;Name=WP_032103601.1;gbkey=CDS;gene=mtlA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229402.1;locus_tag=LI478_RS05395;product=PTS mannitol transporter subunit IICBA;protein_id=WP_032103601.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1092227 1093375 . + . ID=gene-LI478_RS05400;Name=mtlD;gbkey=Gene;gene=mtlD;gene_biotype=protein_coding;locus_tag=LI478_RS05400 NZ_CP085478.1 Protein Homology CDS 1092227 1093375 . + 0 ID=cds-WP_063417070.1;Parent=gene-LI478_RS05400;Dbxref=Genbank:WP_063417070.1;Name=WP_063417070.1;Ontology_term=GO:0019594,GO:0008926;gbkey=CDS;gene=mtlD;go_function=mannitol-1-phosphate 5-dehydrogenase activity|0008926||IEA;go_process=mannitol metabolic process|0019594||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229403.1;locus_tag=LI478_RS05400;product=mannitol-1-phosphate 5-dehydrogenase;protein_id=WP_063417070.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1093375 1093971 . + . ID=gene-LI478_RS05405;Name=mtlR;gbkey=Gene;gene=mtlR;gene_biotype=protein_coding;locus_tag=LI478_RS05405 NZ_CP085478.1 Protein Homology CDS 1093375 1093971 . + 0 ID=cds-WP_002922401.1;Parent=gene-LI478_RS05405;Dbxref=Genbank:WP_002922401.1;Name=WP_002922401.1;gbkey=CDS;gene=mtlR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229404.1;locus_tag=LI478_RS05405;product=mannitol operon repressor MtlR;protein_id=WP_002922401.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1093960 1094184 . - . ID=gene-LI478_RS05410;Name=LI478_RS05410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS05410 NZ_CP085478.1 Protein Homology CDS 1093960 1094184 . - 0 ID=cds-WP_002922402.1;Parent=gene-LI478_RS05410;Dbxref=Genbank:WP_002922402.1;Name=WP_002922402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229405.1;locus_tag=LI478_RS05410;product=hypothetical protein;protein_id=WP_002922402.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1094457 1094819 . + . ID=gene-LI478_RS05415;Name=LI478_RS05415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS05415 NZ_CP085478.1 Protein Homology CDS 1094457 1094819 . + 0 ID=cds-WP_002922410.1;Parent=gene-LI478_RS05415;Dbxref=Genbank:WP_002922410.1;Name=WP_002922410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229406.1;locus_tag=LI478_RS05415;product=YibL family ribosome-associated protein;protein_id=WP_002922410.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1095104 1096759 . + . ID=gene-LI478_RS05420;Name=lldP;gbkey=Gene;gene=lldP;gene_biotype=protein_coding;locus_tag=LI478_RS05420 NZ_CP085478.1 Protein Homology CDS 1095104 1096759 . + 0 ID=cds-WP_002922413.1;Parent=gene-LI478_RS05420;Dbxref=Genbank:WP_002922413.1;Name=WP_002922413.1;Ontology_term=GO:0015727,GO:0015129,GO:0005886;gbkey=CDS;gene=lldP;go_component=plasma membrane|0005886||IEA;go_function=lactate transmembrane transporter activity|0015129||IEA;go_process=lactate transport|0015727||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229407.1;locus_tag=LI478_RS05420;product=L-lactate permease;protein_id=WP_002922413.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1096756 1097529 . + . ID=gene-LI478_RS05425;Name=lldR;gbkey=Gene;gene=lldR;gene_biotype=protein_coding;locus_tag=LI478_RS05425 NZ_CP085478.1 Protein Homology CDS 1096756 1097529 . + 0 ID=cds-WP_002922415.1;Parent=gene-LI478_RS05425;Dbxref=Genbank:WP_002922415.1;Name=WP_002922415.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=lldR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229408.1;locus_tag=LI478_RS05425;product=transcriptional regulator LldR;protein_id=WP_002922415.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1097529 1098713 . + . ID=gene-LI478_RS05430;Name=lldD;gbkey=Gene;gene=lldD;gene_biotype=protein_coding;locus_tag=LI478_RS05430 NZ_CP085478.1 Protein Homology CDS 1097529 1098713 . + 0 ID=cds-WP_002922420.1;Parent=gene-LI478_RS05430;Dbxref=Genbank:WP_002922420.1;Name=WP_002922420.1;Ontology_term=GO:0006089,GO:0004457,GO:0010181;gbkey=CDS;gene=lldD;go_function=lactate dehydrogenase activity|0004457||IEA,FMN binding|0010181||IEA;go_process=lactate metabolic process|0006089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229409.1;locus_tag=LI478_RS05430;product=FMN-dependent L-lactate dehydrogenase LldD;protein_id=WP_002922420.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1098806 1099279 . + . ID=gene-LI478_RS05435;Name=trmL;gbkey=Gene;gene=trmL;gene_biotype=protein_coding;locus_tag=LI478_RS05435 NZ_CP085478.1 Protein Homology CDS 1098806 1099279 . + 0 ID=cds-WP_002922423.1;Parent=gene-LI478_RS05435;Dbxref=Genbank:WP_002922423.1;Name=WP_002922423.1;Ontology_term=GO:0001510,GO:0008173;gbkey=CDS;gene=trmL;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000932331.1;locus_tag=LI478_RS05435;product=tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL;protein_id=WP_002922423.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1099382 1100203 . - . ID=gene-LI478_RS05440;Name=cysE;gbkey=Gene;gene=cysE;gene_biotype=protein_coding;locus_tag=LI478_RS05440 NZ_CP085478.1 Protein Homology CDS 1099382 1100203 . - 0 ID=cds-WP_002922426.1;Parent=gene-LI478_RS05440;Dbxref=Genbank:WP_002922426.1;Name=WP_002922426.1;Ontology_term=GO:0006535,GO:0009001;gbkey=CDS;gene=cysE;go_function=serine O-acetyltransferase activity|0009001||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001112113.1;locus_tag=LI478_RS05440;product=serine O-acetyltransferase;protein_id=WP_002922426.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1100277 1101296 . - . ID=gene-LI478_RS05445;Name=gpsA;gbkey=Gene;gene=gpsA;gene_biotype=protein_coding;locus_tag=LI478_RS05445 NZ_CP085478.1 Protein Homology CDS 1100277 1101296 . - 0 ID=cds-WP_002922427.1;Parent=gene-LI478_RS05445;Dbxref=Genbank:WP_002922427.1;Name=WP_002922427.1;Ontology_term=GO:0006072,GO:0047952;gbkey=CDS;gene=gpsA;go_function=glycerol-3-phosphate dehydrogenase [NAD(P)+] activity|0047952||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229412.1;locus_tag=LI478_RS05445;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;protein_id=WP_002922427.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1101296 1101763 . - . ID=gene-LI478_RS05450;Name=secB;gbkey=Gene;gene=secB;gene_biotype=protein_coding;locus_tag=LI478_RS05450 NZ_CP085478.1 Protein Homology CDS 1101296 1101763 . - 0 ID=cds-WP_002922428.1;Parent=gene-LI478_RS05450;Dbxref=Genbank:WP_002922428.1;Name=WP_002922428.1;gbkey=CDS;gene=secB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015369180.1;locus_tag=LI478_RS05450;product=protein-export chaperone SecB;protein_id=WP_002922428.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1101824 1102075 . - . ID=gene-LI478_RS05455;Name=grxC;gbkey=Gene;gene=grxC;gene_biotype=protein_coding;locus_tag=LI478_RS05455 NZ_CP085478.1 Protein Homology CDS 1101824 1102075 . - 0 ID=cds-WP_002922429.1;Parent=gene-LI478_RS05455;Dbxref=Genbank:WP_002922429.1;Name=WP_002922429.1;gbkey=CDS;gene=grxC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229414.1;locus_tag=LI478_RS05455;product=glutaredoxin 3;protein_id=WP_002922429.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1102180 1102611 . - . ID=gene-LI478_RS05460;Name=LI478_RS05460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS05460 NZ_CP085478.1 Protein Homology CDS 1102180 1102611 . - 0 ID=cds-WP_002922436.1;Parent=gene-LI478_RS05460;Dbxref=Genbank:WP_002922436.1;Name=WP_002922436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229415.1;locus_tag=LI478_RS05460;product=rhodanese-like domain-containing protein;protein_id=WP_002922436.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1102857 1104401 . + . ID=gene-LI478_RS05465;Name=gpmM;gbkey=Gene;gene=gpmM;gene_biotype=protein_coding;gene_synonym=pgmI;locus_tag=LI478_RS05465 NZ_CP085478.1 Protein Homology CDS 1102857 1104401 . + 0 ID=cds-WP_004152046.1;Parent=gene-LI478_RS05465;Dbxref=Genbank:WP_004152046.1;Name=WP_004152046.1;Ontology_term=GO:0006007,GO:0004619;gbkey=CDS;gene=gpmM;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glucose catabolic process|0006007||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229416.1;locus_tag=LI478_RS05465;product=2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase;protein_id=WP_004152046.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1104411 1105682 . + . ID=gene-LI478_RS05470;Name=envC;gbkey=Gene;gene=envC;gene_biotype=protein_coding;locus_tag=LI478_RS05470 NZ_CP085478.1 Protein Homology CDS 1104411 1105682 . + 0 ID=cds-WP_002922458.1;Parent=gene-LI478_RS05470;Dbxref=Genbank:WP_002922458.1;Name=WP_002922458.1;gbkey=CDS;gene=envC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229417.1;locus_tag=LI478_RS05470;product=murein hydrolase activator EnvC;protein_id=WP_002922458.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1105686 1106633 . + . ID=gene-LI478_RS05475;Name=LI478_RS05475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS05475 NZ_CP085478.1 Protein Homology CDS 1105686 1106633 . + 0 ID=cds-WP_002922459.1;Parent=gene-LI478_RS05475;Dbxref=Genbank:WP_002922459.1;Name=WP_002922459.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229418.1;locus_tag=LI478_RS05475;product=divergent polysaccharide deacetylase family protein;protein_id=WP_002922459.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1106639 1107376 . - . ID=gene-LI478_RS05480;Name=LI478_RS05480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS05480 NZ_CP085478.1 Protein Homology CDS 1106639 1107376 . - 0 ID=cds-WP_014343446.1;Parent=gene-LI478_RS05480;Dbxref=Genbank:WP_014343446.1;Name=WP_014343446.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229419.1;locus_tag=LI478_RS05480;product=glycosyltransferase family 2 protein;protein_id=WP_014343446.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1107596 1108621 . - . ID=gene-LI478_RS05485;Name=tdh;gbkey=Gene;gene=tdh;gene_biotype=protein_coding;locus_tag=LI478_RS05485 NZ_CP085478.1 Protein Homology CDS 1107596 1108621 . - 0 ID=cds-WP_002922461.1;Parent=gene-LI478_RS05485;Dbxref=Genbank:WP_002922461.1;Name=WP_002922461.1;Ontology_term=GO:0006567,GO:0008743;gbkey=CDS;gene=tdh;go_function=L-threonine 3-dehydrogenase activity|0008743||IEA;go_process=threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120462.1;locus_tag=LI478_RS05485;product=L-threonine 3-dehydrogenase;protein_id=WP_002922461.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1108634 1109827 . - . ID=gene-LI478_RS05490;Name=kbl;gbkey=Gene;gene=kbl;gene_biotype=protein_coding;locus_tag=LI478_RS05490 NZ_CP085478.1 Protein Homology CDS 1108634 1109827 . - 0 ID=cds-WP_002922462.1;Parent=gene-LI478_RS05490;Dbxref=Genbank:WP_002922462.1;Name=WP_002922462.1;Ontology_term=GO:0006567,GO:0008890;gbkey=CDS;gene=kbl;go_function=glycine C-acetyltransferase activity|0008890||IEA;go_process=threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229421.1;locus_tag=LI478_RS05490;product=glycine C-acetyltransferase;protein_id=WP_002922462.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1110041 1110973 . + . ID=gene-LI478_RS05495;Name=rfaD;gbkey=Gene;gene=rfaD;gene_biotype=protein_coding;locus_tag=LI478_RS05495 NZ_CP085478.1 Protein Homology CDS 1110041 1110973 . + 0 ID=cds-WP_002922463.1;Parent=gene-LI478_RS05495;Dbxref=Genbank:WP_002922463.1;Name=WP_002922463.1;Ontology_term=GO:0005975,GO:0008712;gbkey=CDS;gene=rfaD;go_function=ADP-glyceromanno-heptose 6-epimerase activity|0008712||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233050.1;locus_tag=LI478_RS05495;product=ADP-glyceromanno-heptose 6-epimerase;protein_id=WP_002922463.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1110983 1112041 . + . ID=gene-LI478_RS05500;Name=rfaF;gbkey=Gene;gene=rfaF;gene_biotype=protein_coding;locus_tag=LI478_RS05500 NZ_CP085478.1 Protein Homology CDS 1110983 1112041 . + 0 ID=cds-WP_002922465.1;Parent=gene-LI478_RS05500;Dbxref=Genbank:WP_002922465.1;Name=WP_002922465.1;Ontology_term=GO:0009103,GO:0016757;gbkey=CDS;gene=rfaF;go_function=glycosyltransferase activity|0016757||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012540314.1;locus_tag=LI478_RS05500;product=ADP-heptose--LPS heptosyltransferase RfaF;protein_id=WP_002922465.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1112045 1113016 . + . ID=gene-LI478_RS05505;Name=rfaC;gbkey=Gene;gene=rfaC;gene_biotype=protein_coding;locus_tag=LI478_RS05505 NZ_CP085478.1 Protein Homology CDS 1112045 1113016 . + 0 ID=cds-WP_004152048.1;Parent=gene-LI478_RS05505;Dbxref=Genbank:WP_004152048.1;Name=WP_004152048.1;Ontology_term=GO:0009244,GO:0008920;gbkey=CDS;gene=rfaC;go_function=lipopolysaccharide heptosyltransferase activity|0008920||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229424.1;locus_tag=LI478_RS05505;product=lipopolysaccharide heptosyltransferase RfaC;protein_id=WP_004152048.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1113016 1113924 . + . ID=gene-LI478_RS05510;Name=LI478_RS05510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS05510 NZ_CP085478.1 Protein Homology CDS 1113016 1113924 . + 0 ID=cds-WP_002922468.1;Parent=gene-LI478_RS05510;Dbxref=Genbank:WP_002922468.1;Name=WP_002922468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229425.1;locus_tag=LI478_RS05510;product=sugar glycosyltransferase;protein_id=WP_002922468.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1113902 1115071 . + . ID=gene-LI478_RS05515;Name=LI478_RS05515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS05515 NZ_CP085478.1 Protein Homology CDS 1113902 1115071 . + 0 ID=cds-WP_004164973.1;Parent=gene-LI478_RS05515;Dbxref=Genbank:WP_004164973.1;Name=WP_004164973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229426.1;locus_tag=LI478_RS05515;product=O-antigen ligase family protein;protein_id=WP_004164973.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1115115 1116194 . - . ID=gene-LI478_RS05520;Name=LI478_RS05520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS05520 NZ_CP085478.1 Protein Homology CDS 1115115 1116194 . - 0 ID=cds-WP_002922472.1;Parent=gene-LI478_RS05520;Dbxref=Genbank:WP_002922472.1;Name=WP_002922472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004205059.1;locus_tag=LI478_RS05520;product=glycosyltransferase family 9 protein;protein_id=WP_002922472.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1116213 1117175 . - . ID=gene-LI478_RS05525;Name=LI478_RS05525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS05525 NZ_CP085478.1 Protein Homology CDS 1116213 1117175 . - 0 ID=cds-WP_002922494.1;Parent=gene-LI478_RS05525;Dbxref=Genbank:WP_002922494.1;Name=WP_002922494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229430.1;locus_tag=LI478_RS05525;product=polysaccharide deacetylase family protein;protein_id=WP_002922494.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1117287 1118363 . + . ID=gene-LI478_RS05530;Name=rfaQ;gbkey=Gene;gene=rfaQ;gene_biotype=protein_coding;locus_tag=LI478_RS05530 NZ_CP085478.1 Protein Homology CDS 1117287 1118363 . + 0 ID=cds-WP_020801971.1;Parent=gene-LI478_RS05530;Dbxref=Genbank:WP_020801971.1;Name=WP_020801971.1;Ontology_term=GO:0016757;gbkey=CDS;gene=rfaQ;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229431.1;locus_tag=LI478_RS05530;product=putative lipopolysaccharide heptosyltransferase III;protein_id=WP_020801971.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1118360 1119487 . + . ID=gene-LI478_RS05535;Name=LI478_RS05535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS05535 NZ_CP085478.1 Protein Homology CDS 1118360 1119487 . + 0 ID=cds-WP_032415809.1;Parent=gene-LI478_RS05535;Dbxref=Genbank:WP_032415809.1;Name=WP_032415809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004145261.1;locus_tag=LI478_RS05535;product=glycosyltransferase family 4 protein;protein_id=WP_032415809.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1119490 1120584 . + . ID=gene-LI478_RS05540;Name=LI478_RS05540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS05540 NZ_CP085478.1 Protein Homology CDS 1119490 1120584 . + 0 ID=cds-WP_064153048.1;Parent=gene-LI478_RS05540;Dbxref=Genbank:WP_064153048.1;Name=WP_064153048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229433.1;locus_tag=LI478_RS05540;product=glycosyltransferase;protein_id=WP_064153048.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1120614 1121603 . + . ID=gene-LI478_RS05545;Name=LI478_RS05545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS05545 NZ_CP085478.1 Protein Homology CDS 1120614 1121603 . + 0 ID=cds-WP_002922498.1;Parent=gene-LI478_RS05545;Dbxref=Genbank:WP_002922498.1;Name=WP_002922498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229434.1;locus_tag=LI478_RS05545;product=glycosyltransferase;protein_id=WP_002922498.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1121695 1122969 . + . ID=gene-LI478_RS05550;Name=waaA;gbkey=Gene;gene=waaA;gene_biotype=protein_coding;locus_tag=LI478_RS05550 NZ_CP085478.1 Protein Homology CDS 1121695 1122969 . + 0 ID=cds-WP_004145263.1;Parent=gene-LI478_RS05550;Dbxref=Genbank:WP_004145263.1;Name=WP_004145263.1;Ontology_term=GO:0016740;gbkey=CDS;gene=waaA;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229435.1;locus_tag=LI478_RS05550;product=lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase;protein_id=WP_004145263.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1122969 1123745 . + . ID=gene-LI478_RS05555;Name=LI478_RS05555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS05555 NZ_CP085478.1 Protein Homology CDS 1122969 1123745 . + 0 ID=cds-WP_004145264.1;Parent=gene-LI478_RS05555;Dbxref=Genbank:WP_004145264.1;Name=WP_004145264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229436.1;locus_tag=LI478_RS05555;product=glycosyltransferase family 2 protein;protein_id=WP_004145264.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1123742 1124221 . + . ID=gene-LI478_RS05560;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=LI478_RS05560 NZ_CP085478.1 Protein Homology CDS 1123742 1124221 . + 0 ID=cds-WP_002922501.1;Parent=gene-LI478_RS05560;Dbxref=Genbank:WP_002922501.1;Name=WP_002922501.1;Ontology_term=GO:0015937,GO:0004595;gbkey=CDS;gene=coaD;go_function=pantetheine-phosphate adenylyltransferase activity|0004595||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229437.1;locus_tag=LI478_RS05560;product=pantetheine-phosphate adenylyltransferase;protein_id=WP_002922501.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1124409 1125218 . - . ID=gene-LI478_RS05565;Name=mutM;gbkey=Gene;gene=mutM;gene_biotype=protein_coding;locus_tag=LI478_RS05565 NZ_CP085478.1 Protein Homology CDS 1124409 1125218 . - 0 ID=cds-WP_004173907.1;Parent=gene-LI478_RS05565;Dbxref=Genbank:WP_004173907.1;Name=WP_004173907.1;Ontology_term=GO:0006281,GO:0006284,GO:0003676,GO:0003684,GO:0003906,GO:0008270,GO:0008534,GO:0016799,GO:0019104;gbkey=CDS;gene=mutM;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA,zinc ion binding|0008270||IEA,oxidized purine nucleobase lesion DNA N-glycosylase activity|0008534||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA,DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA,base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229438.1;locus_tag=LI478_RS05565;product=bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase;protein_id=WP_004173907.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1125354 1125521 . - . ID=gene-LI478_RS05570;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=LI478_RS05570 NZ_CP085478.1 Protein Homology CDS 1125354 1125521 . - 0 ID=cds-WP_002922510.1;Parent=gene-LI478_RS05570;Dbxref=Genbank:WP_002922510.1;Name=WP_002922510.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmG;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847629.1;locus_tag=LI478_RS05570;product=50S ribosomal protein L33;protein_id=WP_002922510.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1125542 1125778 . - . ID=gene-LI478_RS05575;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=LI478_RS05575 NZ_CP085478.1 Protein Homology CDS 1125542 1125778 . - 0 ID=cds-WP_000091955.1;Parent=gene-LI478_RS05575;Dbxref=Genbank:WP_000091955.1;Name=WP_000091955.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rpmB;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008457442.1;locus_tag=LI478_RS05575;product=50S ribosomal protein L28;protein_id=WP_000091955.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1125995 1126660 . - . ID=gene-LI478_RS05580;Name=radC;gbkey=Gene;gene=radC;gene_biotype=protein_coding;locus_tag=LI478_RS05580 NZ_CP085478.1 Protein Homology CDS 1125995 1126660 . - 0 ID=cds-WP_002922589.1;Parent=gene-LI478_RS05580;Dbxref=Genbank:WP_002922589.1;Name=WP_002922589.1;Ontology_term=GO:0006281,GO:0003677;gbkey=CDS;gene=radC;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229441.1;locus_tag=LI478_RS05580;product=DNA repair protein RadC;protein_id=WP_002922589.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1126833 1128047 . + . ID=gene-LI478_RS05585;Name=coaBC;gbkey=Gene;gene=coaBC;gene_biotype=protein_coding;locus_tag=LI478_RS05585 NZ_CP085478.1 Protein Homology CDS 1126833 1128047 . + 0 ID=cds-WP_064153064.1;Parent=gene-LI478_RS05585;Dbxref=Genbank:WP_064153064.1;Name=WP_064153064.1;Ontology_term=GO:0015937,GO:0015939,GO:0004632,GO:0004633;gbkey=CDS;gene=coaBC;go_function=phosphopantothenate--cysteine ligase activity|0004632||IEA,phosphopantothenoylcysteine decarboxylase activity|0004633||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA,pantothenate metabolic process|0015939||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418096.4;locus_tag=LI478_RS05585;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;protein_id=WP_064153064.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1128025 1128483 . + . ID=gene-LI478_RS05590;Name=dut;gbkey=Gene;gene=dut;gene_biotype=protein_coding;locus_tag=LI478_RS05590 NZ_CP085478.1 Protein Homology CDS 1128025 1128483 . + 0 ID=cds-WP_032415811.1;Parent=gene-LI478_RS05590;Dbxref=Genbank:WP_032415811.1;Name=WP_032415811.1;Ontology_term=GO:0006226,GO:0046081,GO:0000287,GO:0004170;gbkey=CDS;gene=dut;go_function=magnesium ion binding|0000287||IEA,dUTP diphosphatase activity|0004170||IEA;go_process=dUMP biosynthetic process|0006226||IEA,dUTP catabolic process|0046081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000976070.1;locus_tag=LI478_RS05590;product=dUTP diphosphatase;protein_id=WP_032415811.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1128608 1129204 . + . ID=gene-LI478_RS05595;Name=slmA;gbkey=Gene;gene=slmA;gene_biotype=protein_coding;locus_tag=LI478_RS05595 NZ_CP085478.1 Protein Homology CDS 1128608 1129204 . + 0 ID=cds-WP_002922598.1;Parent=gene-LI478_RS05595;Dbxref=Genbank:WP_002922598.1;Name=WP_002922598.1;Ontology_term=GO:0010974,GO:0003677;gbkey=CDS;gene=slmA;go_function=DNA binding|0003677||IEA;go_process=negative regulation of division septum assembly|0010974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000818604.1;locus_tag=LI478_RS05595;product=nucleoid occlusion factor SlmA;protein_id=WP_002922598.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1129380 1130396 . + . ID=gene-LI478_RS05600;Name=LI478_RS05600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS05600 NZ_CP085478.1 Protein Homology CDS 1129380 1130396 . + 0 ID=cds-WP_004173905.1;Parent=gene-LI478_RS05600;Dbxref=Genbank:WP_004173905.1;Name=WP_004173905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008806830.1;locus_tag=LI478_RS05600;product=SMP-30/gluconolactonase/LRE family protein;protein_id=WP_004173905.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1130432 1131073 . - . ID=gene-LI478_RS05605;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=LI478_RS05605 NZ_CP085478.1 Protein Homology CDS 1130432 1131073 . - 0 ID=cds-WP_002922600.1;Parent=gene-LI478_RS05605;Dbxref=Genbank:WP_002922600.1;Name=WP_002922600.1;Ontology_term=GO:0009220,GO:0004588;gbkey=CDS;gene=pyrE;go_function=orotate phosphoribosyltransferase activity|0004588||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229445.1;locus_tag=LI478_RS05605;product=orotate phosphoribosyltransferase;protein_id=WP_002922600.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1131184 1131900 . - . ID=gene-LI478_RS05610;Name=rph;gbkey=Gene;gene=rph;gene_biotype=protein_coding;locus_tag=LI478_RS05610 NZ_CP085478.1 Protein Homology CDS 1131184 1131900 . - 0 ID=cds-WP_002922602.1;Parent=gene-LI478_RS05610;Dbxref=Genbank:WP_002922602.1;Name=WP_002922602.1;Ontology_term=GO:0008033,GO:0004549;gbkey=CDS;gene=rph;go_function=tRNA-specific ribonuclease activity|0004549||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006803115.1;locus_tag=LI478_RS05610;product=ribonuclease PH;protein_id=WP_002922602.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1131997 1133091 . - . ID=gene-LI478_RS05615;Name=LI478_RS05615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS05615 NZ_CP085478.1 Protein Homology CDS 1131997 1133091 . - 0 ID=cds-WP_004150202.1;Parent=gene-LI478_RS05615;Dbxref=Genbank:WP_004150202.1;Name=WP_004150202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229447.1;locus_tag=LI478_RS05615;product=ABC transporter permease;protein_id=WP_004150202.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1133123 1134040 . - . ID=gene-LI478_RS05620;Name=LI478_RS05620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS05620 NZ_CP085478.1 Protein Homology CDS 1133123 1134040 . - 0 ID=cds-WP_032439046.1;Parent=gene-LI478_RS05620;Dbxref=Genbank:WP_032439046.1;Name=WP_032439046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012540304.1;locus_tag=LI478_RS05620;product=ABC transporter ATP-binding protein;protein_id=WP_032439046.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1134145 1135113 . - . ID=gene-LI478_RS05625;Name=LI478_RS05625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS05625 NZ_CP085478.1 Protein Homology CDS 1134145 1135113 . - 0 ID=cds-WP_004225014.1-2;Parent=gene-LI478_RS05625;Dbxref=Genbank:WP_004225014.1;Name=WP_004225014.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=LI478_RS05625;product=IS5 family transposase;protein_id=WP_004225014.1;transl_table=11 NZ_CP085478.1 RefSeq pseudogene 1135146 1135760 . - . ID=gene-LI478_RS05630;Name=LI478_RS05630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS05630;partial=true;pseudo=true;start_range=.,1135146 NZ_CP085478.1 Protein Homology CDS 1135146 1135760 . - 0 ID=cds-LI478_RS05630;Parent=gene-LI478_RS05630;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000124716.1;locus_tag=LI478_RS05630;partial=true;product=integrase arm-type DNA-binding domain-containing protein;pseudo=true;start_range=.,1135146;transl_table=11 NZ_CP085478.1 RefSeq gene 1135945 1136307 . - . ID=gene-LI478_RS05635;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=LI478_RS05635 NZ_CP085478.1 cmsearch tmRNA 1135945 1136307 . - . ID=rna-LI478_RS05635;Parent=gene-LI478_RS05635;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LI478_RS05635;product=transfer-messenger RNA NZ_CP085478.1 cmsearch exon 1135945 1136307 . - . ID=exon-LI478_RS05635-1;Parent=rna-LI478_RS05635;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LI478_RS05635;product=transfer-messenger RNA NZ_CP085478.1 RefSeq gene 1136452 1136934 . - . ID=gene-LI478_RS05640;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=LI478_RS05640 NZ_CP085478.1 Protein Homology CDS 1136452 1136934 . - 0 ID=cds-WP_002914164.1;Parent=gene-LI478_RS05640;Dbxref=Genbank:WP_002914164.1;Name=WP_002914164.1;Ontology_term=GO:0003723;gbkey=CDS;gene=smpB;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228361.1;locus_tag=LI478_RS05640;product=SsrA-binding protein SmpB;protein_id=WP_002914164.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1137084 1137521 . + . ID=gene-LI478_RS05645;Name=LI478_RS05645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS05645 NZ_CP085478.1 Protein Homology CDS 1137084 1137521 . + 0 ID=cds-WP_004174798.1;Parent=gene-LI478_RS05645;Dbxref=Genbank:WP_004174798.1;Name=WP_004174798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015963348.1;locus_tag=LI478_RS05645;product=type II toxin-antitoxin system RatA family toxin;protein_id=WP_004174798.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1137511 1137801 . + . ID=gene-LI478_RS05650;Name=LI478_RS05650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS05650 NZ_CP085478.1 Protein Homology CDS 1137511 1137801 . + 0 ID=cds-WP_004145682.1;Parent=gene-LI478_RS05650;Dbxref=Genbank:WP_004145682.1;Name=WP_004145682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228359.1;locus_tag=LI478_RS05650;product=RnfH family protein;protein_id=WP_004145682.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1137869 1138210 . - . ID=gene-LI478_RS05655;Name=bamE;gbkey=Gene;gene=bamE;gene_biotype=protein_coding;locus_tag=LI478_RS05655 NZ_CP085478.1 Protein Homology CDS 1137869 1138210 . - 0 ID=cds-WP_002914160.1;Parent=gene-LI478_RS05655;Dbxref=Genbank:WP_002914160.1;Name=WP_002914160.1;gbkey=CDS;gene=bamE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228358.1;locus_tag=LI478_RS05655;product=outer membrane protein assembly factor BamE;protein_id=WP_002914160.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1138358 1140019 . - . ID=gene-LI478_RS05660;Name=recN;gbkey=Gene;gene=recN;gene_biotype=protein_coding;locus_tag=LI478_RS05660 NZ_CP085478.1 Protein Homology CDS 1138358 1140019 . - 0 ID=cds-WP_004174799.1;Parent=gene-LI478_RS05660;Dbxref=Genbank:WP_004174799.1;Name=WP_004174799.1;Ontology_term=GO:0006281,GO:0006310,GO:0005524;gbkey=CDS;gene=recN;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228356.1;locus_tag=LI478_RS05660;product=DNA repair protein RecN;protein_id=WP_004174799.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1140106 1140984 . - . ID=gene-LI478_RS05665;Name=nadK;gbkey=Gene;gene=nadK;gene_biotype=protein_coding;locus_tag=LI478_RS05665 NZ_CP085478.1 Protein Homology CDS 1140106 1140984 . - 0 ID=cds-WP_002914158.1;Parent=gene-LI478_RS05665;Dbxref=Genbank:WP_002914158.1;Name=WP_002914158.1;Ontology_term=GO:0003951;gbkey=CDS;gene=nadK;go_function=NAD+ kinase activity|0003951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020239499.1;locus_tag=LI478_RS05665;product=NAD(+) kinase;protein_id=WP_002914158.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1141108 1141698 . + . ID=gene-LI478_RS05670;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;locus_tag=LI478_RS05670 NZ_CP085478.1 Protein Homology CDS 1141108 1141698 . + 0 ID=cds-WP_004174800.1;Parent=gene-LI478_RS05670;Dbxref=Genbank:WP_004174800.1;Name=WP_004174800.1;gbkey=CDS;gene=grpE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228354.1;locus_tag=LI478_RS05670;product=nucleotide exchange factor GrpE;protein_id=WP_004174800.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1141818 1143104 . - . ID=gene-LI478_RS05675;Name=LI478_RS05675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS05675 NZ_CP085478.1 Protein Homology CDS 1141818 1143104 . - 0 ID=cds-WP_004149392.1;Parent=gene-LI478_RS05675;Dbxref=Genbank:WP_004149392.1;Name=WP_004149392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026171.3;locus_tag=LI478_RS05675;product=HlyC/CorC family transporter;protein_id=WP_004149392.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1143124 1143915 . - . ID=gene-LI478_RS05680;Name=LI478_RS05680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS05680 NZ_CP085478.1 Protein Homology CDS 1143124 1143915 . - 0 ID=cds-WP_002914153.1;Parent=gene-LI478_RS05680;Dbxref=Genbank:WP_002914153.1;Name=WP_002914153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228349.1;locus_tag=LI478_RS05680;product=inner membrane protein YpjD;protein_id=WP_002914153.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1144079 1145443 . + . ID=gene-LI478_RS05685;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=LI478_RS05685 NZ_CP085478.1 Protein Homology CDS 1144079 1145443 . + 0 ID=cds-WP_002914152.1;Parent=gene-LI478_RS05685;Dbxref=Genbank:WP_002914152.1;Name=WP_002914152.1;Ontology_term=GO:0009306,GO:0003924,GO:0005048,GO:0048501;gbkey=CDS;gene=ffh;go_component=signal recognition particle%2C plasma membrane targeting|0048501||IEA;go_function=GTPase activity|0003924||IEA,signal sequence binding|0005048||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130432.1;locus_tag=LI478_RS05685;product=signal recognition particle protein;protein_id=WP_002914152.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1145703 1145951 . + . ID=gene-LI478_RS05690;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=LI478_RS05690 NZ_CP085478.1 Protein Homology CDS 1145703 1145951 . + 0 ID=cds-WP_002914149.1;Parent=gene-LI478_RS05690;Dbxref=Genbank:WP_002914149.1;Name=WP_002914149.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsP;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000256453.1;locus_tag=LI478_RS05690;product=30S ribosomal protein S16;protein_id=WP_002914149.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1145970 1146518 . + . ID=gene-LI478_RS05695;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=LI478_RS05695 NZ_CP085478.1 Protein Homology CDS 1145970 1146518 . + 0 ID=cds-WP_004150977.1;Parent=gene-LI478_RS05695;Dbxref=Genbank:WP_004150977.1;Name=WP_004150977.1;Note=Essential for efficient processing of 16S rRNA;Ontology_term=GO:0006364,GO:0003723;gbkey=CDS;gene=rimM;go_function=RNA binding|0003723||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000043333.1;locus_tag=LI478_RS05695;product=ribosome maturation factor RimM;protein_id=WP_004150977.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1146550 1147317 . + . ID=gene-LI478_RS05700;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=LI478_RS05700 NZ_CP085478.1 Protein Homology CDS 1146550 1147317 . + 0 ID=cds-WP_002914147.1;Parent=gene-LI478_RS05700;Dbxref=Genbank:WP_002914147.1;Name=WP_002914147.1;Ontology_term=GO:0006400,GO:0009019;gbkey=CDS;gene=trmD;go_function=tRNA (guanine-N1-)-methyltransferase activity|0009019||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228345.1;locus_tag=LI478_RS05700;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=WP_002914147.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1147357 1147704 . + . ID=gene-LI478_RS05705;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=LI478_RS05705 NZ_CP085478.1 Protein Homology CDS 1147357 1147704 . + 0 ID=cds-WP_002914145.1;Parent=gene-LI478_RS05705;Dbxref=Genbank:WP_002914145.1;Name=WP_002914145.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplS;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012768745.1;locus_tag=LI478_RS05705;product=50S ribosomal protein L19;protein_id=WP_002914145.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1147824 1148282 . + . ID=gene-LI478_RS05710;Name=LI478_RS05710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS05710 NZ_CP085478.1 Protein Homology CDS 1147824 1148282 . + 0 ID=cds-WP_002914119.1;Parent=gene-LI478_RS05710;Dbxref=Genbank:WP_002914119.1;Name=WP_002914119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228298.1;locus_tag=LI478_RS05710;product=DUF2946 domain-containing protein;protein_id=WP_002914119.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1148339 1149709 . + . ID=gene-LI478_RS05715;Name=LI478_RS05715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS05715 NZ_CP085478.1 Protein Homology CDS 1148339 1149709 . + 0 ID=cds-WP_064153711.1;Parent=gene-LI478_RS05715;Dbxref=Genbank:WP_064153711.1;Name=WP_064153711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228297.1;locus_tag=LI478_RS05715;product=PepSY-associated TM helix domain-containing protein;protein_id=WP_064153711.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1149718 1150200 . - . ID=gene-LI478_RS05720;Name=LI478_RS05720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS05720 NZ_CP085478.1 Protein Homology CDS 1149718 1150200 . - 0 ID=cds-WP_004145671.1;Parent=gene-LI478_RS05720;Dbxref=Genbank:WP_004145671.1;Name=WP_004145671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228296.1;locus_tag=LI478_RS05720;product=OmpA family protein;protein_id=WP_004145671.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1150214 1151437 . - . ID=gene-LI478_RS05725;Name=dgcN;gbkey=Gene;gene=dgcN;gene_biotype=protein_coding;locus_tag=LI478_RS05725 NZ_CP085478.1 Protein Homology CDS 1150214 1151437 . - 0 ID=cds-WP_002914116.1;Parent=gene-LI478_RS05725;Dbxref=Genbank:WP_002914116.1;Name=WP_002914116.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;gene=dgcN;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228295.1;locus_tag=LI478_RS05725;product=diguanylate cyclase DgcN;protein_id=WP_002914116.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1151430 1151939 . - . ID=gene-LI478_RS05730;Name=LI478_RS05730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS05730 NZ_CP085478.1 Protein Homology CDS 1151430 1151939 . - 0 ID=cds-WP_004174804.1;Parent=gene-LI478_RS05730;Dbxref=Genbank:WP_004174804.1;Name=WP_004174804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228294.1;locus_tag=LI478_RS05730;product=YfiR family protein;protein_id=WP_004174804.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1152282 1153352 . + . ID=gene-LI478_RS05735;Name=aroF;gbkey=Gene;gene=aroF;gene_biotype=protein_coding;locus_tag=LI478_RS05735 NZ_CP085478.1 Protein Homology CDS 1152282 1153352 . + 0 ID=cds-WP_002914114.1;Parent=gene-LI478_RS05735;Dbxref=Genbank:WP_002914114.1;Name=WP_002914114.1;gbkey=CDS;gene=aroF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228293.1;locus_tag=LI478_RS05735;product=3-deoxy-7-phosphoheptulonate synthase AroF;protein_id=WP_002914114.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1153362 1154483 . + . ID=gene-LI478_RS05740;Name=tyrA;gbkey=Gene;gene=tyrA;gene_biotype=protein_coding;locus_tag=LI478_RS05740 NZ_CP085478.1 Protein Homology CDS 1153362 1154483 . + 0 ID=cds-WP_014907099.1;Parent=gene-LI478_RS05740;Dbxref=Genbank:WP_014907099.1;Name=WP_014907099.1;Ontology_term=GO:0006571,GO:0046417,GO:0004106,GO:0004665,GO:0008977;gbkey=CDS;gene=tyrA;go_function=chorismate mutase activity|0004106||IEA,prephenate dehydrogenase (NADP+) activity|0004665||IEA,prephenate dehydrogenase (NAD+) activity|0008977||IEA;go_process=tyrosine biosynthetic process|0006571||IEA,chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228292.1;locus_tag=LI478_RS05740;product=bifunctional chorismate mutase/prephenate dehydrogenase;protein_id=WP_014907099.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1154546 1155418 . + . ID=gene-LI478_RS05745;Name=LI478_RS05745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS05745 NZ_CP085478.1 Protein Homology CDS 1154546 1155418 . + 0 ID=cds-WP_002914112.1;Parent=gene-LI478_RS05745;Dbxref=Genbank:WP_002914112.1;Name=WP_002914112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228291.1;locus_tag=LI478_RS05745;product=SMP-30/gluconolactonase/LRE family protein;protein_id=WP_002914112.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1155415 1156575 . - . ID=gene-LI478_RS05750;Name=pheA;gbkey=Gene;gene=pheA;gene_biotype=protein_coding;locus_tag=LI478_RS05750 NZ_CP085478.1 Protein Homology CDS 1155415 1156575 . - 0 ID=cds-WP_004150975.1;Parent=gene-LI478_RS05750;Dbxref=Genbank:WP_004150975.1;Name=WP_004150975.1;Ontology_term=GO:0009094,GO:0046417,GO:0004106,GO:0004664;gbkey=CDS;gene=pheA;go_function=chorismate mutase activity|0004106||IEA,prephenate dehydratase activity|0004664||IEA;go_process=L-phenylalanine biosynthetic process|0009094||IEA,chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228290.1;locus_tag=LI478_RS05750;product=bifunctional chorismate mutase/prephenate dehydratase;protein_id=WP_004150975.1;transl_table=11 NZ_CP085478.1 cmsearch sequence_feature 1156600 1156724 . - . ID=id-NZ_CP085478.1:1156600..1156724;Dbxref=RFAM:RF01859;Note=Phe leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1 NZ_CP085478.1 RefSeq gene 1156676 1156723 . - . ID=gene-LI478_RS05755;Name=pheL;gbkey=Gene;gene=pheL;gene_biotype=protein_coding;locus_tag=LI478_RS05755 NZ_CP085478.1 Protein Homology CDS 1156676 1156723 . - 0 ID=cds-WP_100250063.1;Parent=gene-LI478_RS05755;Dbxref=Genbank:WP_100250063.1;Name=WP_100250063.1;gbkey=CDS;gene=pheL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311488.1;locus_tag=LI478_RS05755;product=pheA operon leader peptide PheL;protein_id=WP_100250063.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1156830 1157165 . - . ID=gene-LI478_RS05760;Name=raiA;gbkey=Gene;gene=raiA;gene_biotype=protein_coding;locus_tag=LI478_RS05760 NZ_CP085478.1 Protein Homology CDS 1156830 1157165 . - 0 ID=cds-WP_002914111.1;Parent=gene-LI478_RS05760;Dbxref=Genbank:WP_002914111.1;Name=WP_002914111.1;gbkey=CDS;gene=raiA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228289.1;locus_tag=LI478_RS05760;product=ribosome-associated translation inhibitor RaiA;protein_id=WP_002914111.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1157436 1158173 . - . ID=gene-LI478_RS05765;Name=bamD;gbkey=Gene;gene=bamD;gene_biotype=protein_coding;locus_tag=LI478_RS05765 NZ_CP085478.1 Protein Homology CDS 1157436 1158173 . - 0 ID=cds-WP_004145664.1;Parent=gene-LI478_RS05765;Dbxref=Genbank:WP_004145664.1;Name=WP_004145664.1;gbkey=CDS;gene=bamD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228288.1;locus_tag=LI478_RS05765;product=outer membrane protein assembly factor BamD;protein_id=WP_004145664.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1158305 1159285 . + . ID=gene-LI478_RS05770;Name=rluD;gbkey=Gene;gene=rluD;gene_biotype=protein_coding;locus_tag=LI478_RS05770 NZ_CP085478.1 Protein Homology CDS 1158305 1159285 . + 0 ID=cds-WP_002914110.1;Parent=gene-LI478_RS05770;Dbxref=Genbank:WP_002914110.1;Name=WP_002914110.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=rluD;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383977.1;locus_tag=LI478_RS05770;product=23S rRNA pseudouridine(1911/1915/1917) synthase RluD;protein_id=WP_002914110.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1159282 1160013 . + . ID=gene-LI478_RS05775;Name=yfiH;gbkey=Gene;gene=yfiH;gene_biotype=protein_coding;locus_tag=LI478_RS05775 NZ_CP085478.1 Protein Homology CDS 1159282 1160013 . + 0 ID=cds-WP_004174806.1;Parent=gene-LI478_RS05775;Dbxref=Genbank:WP_004174806.1;Name=WP_004174806.1;Ontology_term=GO:0004000,GO:0004731,GO:0042803;gbkey=CDS;gene=yfiH;go_function=adenosine deaminase activity|0004000||IEA,purine-nucleoside phosphorylase activity|0004731||IEA,protein homodimerization activity|0042803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461592.1;locus_tag=LI478_RS05775;product=purine nucleoside phosphorylase YfiH;protein_id=WP_004174806.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1160143 1162716 . + . ID=gene-LI478_RS05780;Name=clpB;gbkey=Gene;gene=clpB;gene_biotype=protein_coding;locus_tag=LI478_RS05780 NZ_CP085478.1 Protein Homology CDS 1160143 1162716 . + 0 ID=cds-WP_004150973.1;Parent=gene-LI478_RS05780;Dbxref=Genbank:WP_004150973.1;Name=WP_004150973.1;Ontology_term=GO:0009408,GO:0042026,GO:0005524,GO:0016887;gbkey=CDS;gene=clpB;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=response to heat|0009408||IEA,protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002461515.1;locus_tag=LI478_RS05780;product=ATP-dependent chaperone ClpB;protein_id=WP_004150973.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1163182 1164721 . + . ID=gene-LI478_RS05785;Name=LI478_RS05785;gbkey=Gene;gene_biotype=rRNA;locus_tag=LI478_RS05785 NZ_CP085478.1 cmsearch rRNA 1163182 1164721 . + . ID=rna-LI478_RS05785;Parent=gene-LI478_RS05785;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LI478_RS05785;product=16S ribosomal RNA NZ_CP085478.1 cmsearch exon 1163182 1164721 . + . ID=exon-LI478_RS05785-1;Parent=rna-LI478_RS05785;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LI478_RS05785;product=16S ribosomal RNA NZ_CP085478.1 RefSeq gene 1164807 1164882 . + . ID=gene-LI478_RS05790;Name=LI478_RS05790;gbkey=Gene;gene_biotype=tRNA;locus_tag=LI478_RS05790 NZ_CP085478.1 tRNAscan-SE tRNA 1164807 1164882 . + . ID=rna-LI478_RS05790;Parent=gene-LI478_RS05790;anticodon=(pos:1164841..1164843);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS05790;product=tRNA-Glu NZ_CP085478.1 tRNAscan-SE exon 1164807 1164882 . + . ID=exon-LI478_RS05790-1;Parent=rna-LI478_RS05790;anticodon=(pos:1164841..1164843);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS05790;product=tRNA-Glu NZ_CP085478.1 RefSeq gene 1165065 1167966 . + . ID=gene-LI478_RS05795;Name=LI478_RS05795;gbkey=Gene;gene_biotype=rRNA;locus_tag=LI478_RS05795 NZ_CP085478.1 cmsearch rRNA 1165065 1167966 . + . ID=rna-LI478_RS05795;Parent=gene-LI478_RS05795;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LI478_RS05795;product=23S ribosomal RNA NZ_CP085478.1 cmsearch exon 1165065 1167966 . + . ID=exon-LI478_RS05795-1;Parent=rna-LI478_RS05795;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LI478_RS05795;product=23S ribosomal RNA NZ_CP085478.1 RefSeq gene 1168067 1168182 . + . ID=gene-LI478_RS05800;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=LI478_RS05800 NZ_CP085478.1 cmsearch rRNA 1168067 1168182 . + . ID=rna-LI478_RS05800;Parent=gene-LI478_RS05800;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LI478_RS05800;product=5S ribosomal RNA NZ_CP085478.1 cmsearch exon 1168067 1168182 . + . ID=exon-LI478_RS05800-1;Parent=rna-LI478_RS05800;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LI478_RS05800;product=5S ribosomal RNA NZ_CP085478.1 RefSeq gene 1168593 1169891 . + . ID=gene-LI478_RS05805;Name=LI478_RS05805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS05805 NZ_CP085478.1 Protein Homology CDS 1168593 1169891 . + 0 ID=cds-WP_227394175.1;Parent=gene-LI478_RS05805;Dbxref=Genbank:WP_227394175.1;Name=WP_227394175.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228282.1;locus_tag=LI478_RS05805;product=MFS family transporter;protein_id=WP_227394175.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1169895 1170218 . - . ID=gene-LI478_RS05810;Name=LI478_RS05810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS05810 NZ_CP085478.1 Protein Homology CDS 1169895 1170218 . - 0 ID=cds-WP_002914095.1;Parent=gene-LI478_RS05810;Dbxref=Genbank:WP_002914095.1;Name=WP_002914095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228281.1;locus_tag=LI478_RS05810;product=YfiM family lipoprotein;protein_id=WP_002914095.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1170260 1171615 . - . ID=gene-LI478_RS05815;Name=pssA;gbkey=Gene;gene=pssA;gene_biotype=protein_coding;locus_tag=LI478_RS05815 NZ_CP085478.1 Protein Homology CDS 1170260 1171615 . - 0 ID=cds-WP_004180947.1;Parent=gene-LI478_RS05815;Dbxref=Genbank:WP_004180947.1;Name=WP_004180947.1;Ontology_term=GO:0032049,GO:0008444;gbkey=CDS;gene=pssA;go_function=CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity|0008444||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121216.1;locus_tag=LI478_RS05815;product=CDP-diacylglycerol--serine O-phosphatidyltransferase;protein_id=WP_004180947.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1171736 1174387 . - . ID=gene-LI478_RS05820;Name=pat;gbkey=Gene;gene=pat;gene_biotype=protein_coding;locus_tag=LI478_RS05820 NZ_CP085478.1 Protein Homology CDS 1171736 1174387 . - 0 ID=cds-WP_004888432.1;Parent=gene-LI478_RS05820;Dbxref=Genbank:WP_004888432.1;Name=WP_004888432.1;gbkey=CDS;gene=pat;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228279.1;locus_tag=LI478_RS05820;product=protein lysine acetyltransferase;protein_id=WP_004888432.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1174422 1175120 . - . ID=gene-LI478_RS05825;Name=tapT;gbkey=Gene;gene=tapT;gene_biotype=protein_coding;gene_synonym=tuaA,yfiP;locus_tag=LI478_RS05825 NZ_CP085478.1 Protein Homology CDS 1174422 1175120 . - 0 ID=cds-WP_002914092.1;Parent=gene-LI478_RS05825;Dbxref=Genbank:WP_002914092.1;Name=WP_002914092.1;gbkey=CDS;gene=tapT;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228278.1;locus_tag=LI478_RS05825;product=tRNA-uridine aminocarboxypropyltransferase;protein_id=WP_002914092.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1175190 1175615 . - . ID=gene-LI478_RS05830;Name=trxC;gbkey=Gene;gene=trxC;gene_biotype=protein_coding;locus_tag=LI478_RS05830 NZ_CP085478.1 Protein Homology CDS 1175190 1175615 . - 0 ID=cds-WP_002914091.1;Parent=gene-LI478_RS05830;Dbxref=Genbank:WP_002914091.1;Name=WP_002914091.1;Ontology_term=GO:0006662,GO:0015035;gbkey=CDS;gene=trxC;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=glycerol ether metabolic process|0006662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228277.1;locus_tag=LI478_RS05830;product=thioredoxin TrxC;protein_id=WP_002914091.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1175819 1176904 . + . ID=gene-LI478_RS05835;Name=LI478_RS05835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS05835 NZ_CP085478.1 Protein Homology CDS 1175819 1176904 . + 0 ID=cds-WP_002914089.1;Parent=gene-LI478_RS05835;Dbxref=Genbank:WP_002914089.1;Name=WP_002914089.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228276.1;locus_tag=LI478_RS05835;product=tRNA/rRNA methyltransferase;protein_id=WP_002914089.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1176963 1177652 . - . ID=gene-LI478_RS05840;Name=ung;gbkey=Gene;gene=ung;gene_biotype=protein_coding;locus_tag=LI478_RS05840 NZ_CP085478.1 Protein Homology CDS 1176963 1177652 . - 0 ID=cds-WP_002914088.1;Parent=gene-LI478_RS05840;Dbxref=Genbank:WP_002914088.1;Name=WP_002914088.1;Ontology_term=GO:0006284,GO:0004844,GO:0016799;gbkey=CDS;gene=ung;go_function=uracil DNA N-glycosylase activity|0004844||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228275.1;locus_tag=LI478_RS05840;product=uracil-DNA glycosylase;protein_id=WP_002914088.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1177965 1178348 . + . ID=gene-LI478_RS05845;Name=grcA;gbkey=Gene;gene=grcA;gene_biotype=protein_coding;locus_tag=LI478_RS05845 NZ_CP085478.1 Protein Homology CDS 1177965 1178348 . + 0 ID=cds-WP_002914084.1;Parent=gene-LI478_RS05845;Dbxref=Genbank:WP_002914084.1;Name=WP_002914084.1;Ontology_term=GO:0003824;gbkey=CDS;gene=grcA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007728348.1;locus_tag=LI478_RS05845;product=autonomous glycyl radical cofactor GrcA;protein_id=WP_002914084.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1178394 1179725 . - . ID=gene-LI478_RS05850;Name=srmB;gbkey=Gene;gene=srmB;gene_biotype=protein_coding;locus_tag=LI478_RS05850 NZ_CP085478.1 Protein Homology CDS 1178394 1179725 . - 0 ID=cds-WP_002914082.1;Parent=gene-LI478_RS05850;Dbxref=Genbank:WP_002914082.1;Name=WP_002914082.1;Ontology_term=GO:0000027,GO:0003724;gbkey=CDS;gene=srmB;go_function=RNA helicase activity|0003724||IEA;go_process=ribosomal large subunit assembly|0000027||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228273.1;locus_tag=LI478_RS05850;product=ATP-dependent RNA helicase SrmB;protein_id=WP_002914082.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1179857 1180594 . + . ID=gene-LI478_RS05855;Name=LI478_RS05855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS05855 NZ_CP085478.1 Protein Homology CDS 1179857 1180594 . + 0 ID=cds-WP_002914079.1;Parent=gene-LI478_RS05855;Dbxref=Genbank:WP_002914079.1;Name=WP_002914079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228272.1;locus_tag=LI478_RS05855;product=tRNA1(Val) (adenine(37)-N6)-methyltransferase;protein_id=WP_002914079.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1180579 1182198 . - . ID=gene-LI478_RS05860;Name=nadB;gbkey=Gene;gene=nadB;gene_biotype=protein_coding;locus_tag=LI478_RS05860 NZ_CP085478.1 Protein Homology CDS 1180579 1182198 . - 0 ID=cds-WP_064153658.1;Parent=gene-LI478_RS05860;Dbxref=Genbank:WP_064153658.1;Name=WP_064153658.1;Ontology_term=GO:0009435,GO:0008734;gbkey=CDS;gene=nadB;go_function=L-aspartate oxidase activity|0008734||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228271.1;locus_tag=LI478_RS05860;product=L-aspartate oxidase;protein_id=WP_064153658.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1182619 1183194 . + . ID=gene-LI478_RS05870;Name=rpoE;gbkey=Gene;gene=rpoE;gene_biotype=protein_coding;locus_tag=LI478_RS05870 NZ_CP085478.1 Protein Homology CDS 1182619 1183194 . + 0 ID=cds-WP_002914074.1;Parent=gene-LI478_RS05870;Dbxref=Genbank:WP_002914074.1;Name=WP_002914074.1;Ontology_term=GO:0006352,GO:0006979,GO:0016987,GO:0005737;gbkey=CDS;gene=rpoE;go_component=cytoplasm|0005737||IEA;go_function=sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005070454.1;locus_tag=LI478_RS05870;product=RNA polymerase sigma factor RpoE;protein_id=WP_002914074.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1183227 1183877 . + . ID=gene-LI478_RS05875;Name=rseA;gbkey=Gene;gene=rseA;gene_biotype=protein_coding;locus_tag=LI478_RS05875 NZ_CP085478.1 Protein Homology CDS 1183227 1183877 . + 0 ID=cds-WP_002914072.1;Parent=gene-LI478_RS05875;Dbxref=Genbank:WP_002914072.1;Name=WP_002914072.1;Ontology_term=GO:0016989;gbkey=CDS;gene=rseA;go_function=sigma factor antagonist activity|0016989||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228269.1;locus_tag=LI478_RS05875;product=anti-sigma-E factor RseA;protein_id=WP_002914072.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1183877 1184833 . + . ID=gene-LI478_RS05880;Name=rseB;gbkey=Gene;gene=rseB;gene_biotype=protein_coding;locus_tag=LI478_RS05880 NZ_CP085478.1 Protein Homology CDS 1183877 1184833 . + 0 ID=cds-WP_002914070.1;Parent=gene-LI478_RS05880;Dbxref=Genbank:WP_002914070.1;Name=WP_002914070.1;gbkey=CDS;gene=rseB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004144355.1;locus_tag=LI478_RS05880;product=sigma-E factor regulatory protein RseB;protein_id=WP_002914070.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1184830 1185309 . + . ID=gene-LI478_RS05885;Name=rseC;gbkey=Gene;gene=rseC;gene_biotype=protein_coding;locus_tag=LI478_RS05885 NZ_CP085478.1 Protein Homology CDS 1184830 1185309 . + 0 ID=cds-WP_004144354.1;Parent=gene-LI478_RS05885;Dbxref=Genbank:WP_004144354.1;Name=WP_004144354.1;gbkey=CDS;gene=rseC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228267.1;locus_tag=LI478_RS05885;product=SoxR-reducing system protein RseC;protein_id=WP_004144354.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1185495 1187294 . + . ID=gene-LI478_RS05890;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=LI478_RS05890 NZ_CP085478.1 Protein Homology CDS 1185495 1187294 . + 0 ID=cds-WP_002914069.1;Parent=gene-LI478_RS05890;Dbxref=Genbank:WP_002914069.1;Name=WP_002914069.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=lepA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228266.1;locus_tag=LI478_RS05890;product=translation elongation factor 4;protein_id=WP_002914069.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1187310 1188284 . + . ID=gene-LI478_RS05895;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=LI478_RS05895 NZ_CP085478.1 Protein Homology CDS 1187310 1188284 . + 0 ID=cds-WP_002914067.1;Parent=gene-LI478_RS05895;Dbxref=Genbank:WP_002914067.1;Name=WP_002914067.1;Ontology_term=GO:0006465,GO:0004252;gbkey=CDS;gene=lepB;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228265.1;locus_tag=LI478_RS05895;product=signal peptidase I;protein_id=WP_002914067.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1188534 1189214 . + . ID=gene-LI478_RS05900;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=LI478_RS05900 NZ_CP085478.1 Protein Homology CDS 1188534 1189214 . + 0 ID=cds-WP_002914065.1;Parent=gene-LI478_RS05900;Dbxref=Genbank:WP_002914065.1;Name=WP_002914065.1;Ontology_term=GO:0006396,GO:0004525;gbkey=CDS;gene=rnc;go_function=ribonuclease III activity|0004525||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015960048.1;locus_tag=LI478_RS05900;product=ribonuclease III;protein_id=WP_002914065.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1189211 1190116 . + . ID=gene-LI478_RS05905;Name=era;gbkey=Gene;gene=era;gene_biotype=protein_coding;locus_tag=LI478_RS05905 NZ_CP085478.1 Protein Homology CDS 1189211 1190116 . + 0 ID=cds-WP_002914063.1;Parent=gene-LI478_RS05905;Dbxref=Genbank:WP_002914063.1;Name=WP_002914063.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0019843,GO:0043022;gbkey=CDS;gene=era;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,rRNA binding|0019843||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228262.1;locus_tag=LI478_RS05905;product=GTPase Era;protein_id=WP_002914063.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1190128 1190865 . + . ID=gene-LI478_RS05910;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=LI478_RS05910 NZ_CP085478.1 Protein Homology CDS 1190128 1190865 . + 0 ID=cds-WP_002914062.1;Parent=gene-LI478_RS05910;Dbxref=Genbank:WP_002914062.1;Name=WP_002914062.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677;gbkey=CDS;gene=recO;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228261.1;locus_tag=LI478_RS05910;product=DNA repair protein RecO;protein_id=WP_002914062.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1190877 1191608 . + . ID=gene-LI478_RS05915;Name=pdxJ;gbkey=Gene;gene=pdxJ;gene_biotype=protein_coding;locus_tag=LI478_RS05915 NZ_CP085478.1 Protein Homology CDS 1190877 1191608 . + 0 ID=cds-WP_004180923.1;Parent=gene-LI478_RS05915;Dbxref=Genbank:WP_004180923.1;Name=WP_004180923.1;Ontology_term=GO:0008615,GO:0033856;gbkey=CDS;gene=pdxJ;go_function=pyridoxine 5'-phosphate synthase activity|0033856||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228260.1;locus_tag=LI478_RS05915;product=pyridoxine 5'-phosphate synthase;protein_id=WP_004180923.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1191608 1191988 . + . ID=gene-LI478_RS05920;Name=acpS;gbkey=Gene;gene=acpS;gene_biotype=protein_coding;locus_tag=LI478_RS05920 NZ_CP085478.1 Protein Homology CDS 1191608 1191988 . + 0 ID=cds-WP_004144351.1;Parent=gene-LI478_RS05920;Dbxref=Genbank:WP_004144351.1;Name=WP_004144351.1;Ontology_term=GO:0008610,GO:0008897;gbkey=CDS;gene=acpS;go_function=holo-[acyl-carrier-protein] synthase activity|0008897||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228259.1;locus_tag=LI478_RS05920;product=holo-ACP synthase;protein_id=WP_004144351.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1192001 1192261 . - . ID=gene-LI478_RS05925;Name=LI478_RS05925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS05925 NZ_CP085478.1 Protein Homology CDS 1192001 1192261 . - 0 ID=cds-WP_004144350.1;Parent=gene-LI478_RS05925;Dbxref=Genbank:WP_004144350.1;Name=WP_004144350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228258.1;locus_tag=LI478_RS05925;product=YfhL family 4Fe-4S dicluster ferredoxin;protein_id=WP_004144350.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1192318 1193166 . - . ID=gene-LI478_RS05930;Name=LI478_RS05930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS05930 NZ_CP085478.1 Protein Homology CDS 1192318 1193166 . - 0 ID=cds-WP_064153657.1;Parent=gene-LI478_RS05930;Dbxref=Genbank:WP_064153657.1;Name=WP_064153657.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228257.1;locus_tag=LI478_RS05930;product=MurR/RpiR family transcriptional regulator;protein_id=WP_064153657.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1193404 1194015 . + . ID=gene-LI478_RS05935;Name=yfhb;gbkey=Gene;gene=yfhb;gene_biotype=protein_coding;locus_tag=LI478_RS05935 NZ_CP085478.1 Protein Homology CDS 1193404 1194015 . + 0 ID=cds-WP_020317149.1;Parent=gene-LI478_RS05935;Dbxref=Genbank:WP_020317149.1;Name=WP_020317149.1;Ontology_term=GO:0016787;gbkey=CDS;gene=yfhb;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228256.1;locus_tag=LI478_RS05935;product=phosphatidylglycerophosphatase C;protein_id=WP_020317149.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1194078 1194587 . + . ID=gene-LI478_RS05940;Name=tadA;gbkey=Gene;gene=tadA;gene_biotype=protein_coding;locus_tag=LI478_RS05940 NZ_CP085478.1 Protein Homology CDS 1194078 1194587 . + 0 ID=cds-WP_004185144.1;Parent=gene-LI478_RS05940;Dbxref=Genbank:WP_004185144.1;Name=WP_004185144.1;Ontology_term=GO:0002100,GO:0008251,GO:0008270;gbkey=CDS;gene=tadA;go_function=tRNA-specific adenosine deaminase activity|0008251||IEA,zinc ion binding|0008270||IEA;go_process=tRNA wobble adenosine to inosine editing|0002100||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228255.1;locus_tag=LI478_RS05940;product=tRNA adenosine(34) deaminase TadA;protein_id=WP_004185144.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1194584 1196200 . - . ID=gene-LI478_RS05945;Name=mltF;gbkey=Gene;gene=mltF;gene_biotype=protein_coding;locus_tag=LI478_RS05945 NZ_CP085478.1 Protein Homology CDS 1194584 1196200 . - 0 ID=cds-WP_004144346.1;Parent=gene-LI478_RS05945;Dbxref=Genbank:WP_004144346.1;Name=WP_004144346.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltF;go_component=membrane|0016020||IEA;go_function=lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228254.1;locus_tag=LI478_RS05945;product=membrane-bound lytic murein transglycosylase MltF;protein_id=WP_004144346.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1196376 1200263 . + . ID=gene-LI478_RS05950;Name=purL;gbkey=Gene;gene=purL;gene_biotype=protein_coding;gene_synonym=purI;locus_tag=LI478_RS05950 NZ_CP085478.1 Protein Homology CDS 1196376 1200263 . + 0 ID=cds-WP_048332258.1;Parent=gene-LI478_RS05950;Dbxref=Genbank:WP_048332258.1;Name=WP_048332258.1;Ontology_term=GO:0004642;gbkey=CDS;gene=purL;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228253.1;locus_tag=LI478_RS05950;product=phosphoribosylformylglycinamidine synthase;protein_id=WP_048332258.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1200854 1202275 . + . ID=gene-LI478_RS05955;Name=LI478_RS05955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS05955 NZ_CP085478.1 Protein Homology CDS 1200854 1202275 . + 0 ID=cds-WP_004888415.1;Parent=gene-LI478_RS05955;Dbxref=Genbank:WP_004888415.1;Name=WP_004888415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228252.1;locus_tag=LI478_RS05955;product=HAMP domain-containing sensor histidine kinase;protein_id=WP_004888415.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1202305 1202991 . + . ID=gene-LI478_RS05960;Name=qseG;gbkey=Gene;gene=qseG;gene_biotype=protein_coding;locus_tag=LI478_RS05960 NZ_CP085478.1 Protein Homology CDS 1202305 1202991 . + 0 ID=cds-WP_002914033.1;Parent=gene-LI478_RS05960;Dbxref=Genbank:WP_002914033.1;Name=WP_002914033.1;gbkey=CDS;gene=qseG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228251.1;locus_tag=LI478_RS05960;product=two-component system QseEF-associated lipoprotein QseG;protein_id=WP_002914033.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1202978 1204315 . + . ID=gene-LI478_RS05965;Name=glrR;gbkey=Gene;gene=glrR;gene_biotype=protein_coding;locus_tag=LI478_RS05965 NZ_CP085478.1 Protein Homology CDS 1202978 1204315 . + 0 ID=cds-WP_064153656.1;Parent=gene-LI478_RS05965;Dbxref=Genbank:WP_064153656.1;Name=WP_064153656.1;Ontology_term=GO:0000160,GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;gene=glrR;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228250.1;locus_tag=LI478_RS05965;product=two-component system response regulator GlrR;protein_id=WP_064153656.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1204381 1204719 . + . ID=gene-LI478_RS05970;Name=glnB;gbkey=Gene;gene=glnB;gene_biotype=protein_coding;locus_tag=LI478_RS05970 NZ_CP085478.1 Protein Homology CDS 1204381 1204719 . + 0 ID=cds-WP_002914032.1;Parent=gene-LI478_RS05970;Dbxref=Genbank:WP_002914032.1;Name=WP_002914032.1;gbkey=CDS;gene=glnB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017373484.1;locus_tag=LI478_RS05970;product=nitrogen regulatory protein P-II;protein_id=WP_002914032.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1204794 1205984 . - . ID=gene-LI478_RS05975;Name=hmpA;gbkey=Gene;gene=hmpA;gene_biotype=protein_coding;locus_tag=LI478_RS05975 NZ_CP085478.1 Protein Homology CDS 1204794 1205984 . - 0 ID=cds-WP_023313485.1;Parent=gene-LI478_RS05975;Dbxref=Genbank:WP_023313485.1;Name=WP_023313485.1;Ontology_term=GO:0051409,GO:0008941,GO:0019825,GO:0020037,GO:0071949;gbkey=CDS;gene=hmpA;go_function=nitric oxide dioxygenase activity|0008941||IEA,oxygen binding|0019825||IEA,heme binding|0020037||IEA,FAD binding|0071949||IEA;go_process=response to nitrosative stress|0051409||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228248.1;locus_tag=LI478_RS05975;product=NO-inducible flavohemoprotein;protein_id=WP_023313485.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1206310 1207563 . + . ID=gene-LI478_RS05980;Name=LI478_RS05980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS05980 NZ_CP085478.1 Protein Homology CDS 1206310 1207563 . + 0 ID=cds-WP_002914027.1;Parent=gene-LI478_RS05980;Dbxref=Genbank:WP_002914027.1;Name=WP_002914027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077397.1;locus_tag=LI478_RS05980;product=serine hydroxymethyltransferase;protein_id=WP_002914027.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1207619 1208041 . - . ID=gene-LI478_RS05985;Name=LI478_RS05985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS05985 NZ_CP085478.1 Protein Homology CDS 1207619 1208041 . - 0 ID=cds-WP_020801883.1;Parent=gene-LI478_RS05985;Dbxref=Genbank:WP_020801883.1;Name=WP_020801883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228246.1;locus_tag=LI478_RS05985;product=DoxX family protein;protein_id=WP_020801883.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1208115 1209311 . - . ID=gene-LI478_RS05990;Name=LI478_RS05990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS05990 NZ_CP085478.1 Protein Homology CDS 1208115 1209311 . - 0 ID=cds-WP_025367968.1;Parent=gene-LI478_RS05990;Dbxref=Genbank:WP_025367968.1;Name=WP_025367968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228245.1;locus_tag=LI478_RS05990;product=ROK family transcriptional regulator;protein_id=WP_025367968.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1209424 1212699 . + . ID=gene-LI478_RS05995;Name=LI478_RS05995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS05995 NZ_CP085478.1 Protein Homology CDS 1209424 1212699 . + 0 ID=cds-WP_064153655.1;Parent=gene-LI478_RS05995;Dbxref=Genbank:WP_064153655.1;Name=WP_064153655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228244.1;locus_tag=LI478_RS05995;product=DUF5107 domain-containing protein;protein_id=WP_064153655.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1212769 1214205 . + . ID=gene-LI478_RS06000;Name=LI478_RS06000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS06000 NZ_CP085478.1 Protein Homology CDS 1212769 1214205 . + 0 ID=cds-WP_002914018.1;Parent=gene-LI478_RS06000;Dbxref=Genbank:WP_002914018.1;Name=WP_002914018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228243.1;locus_tag=LI478_RS06000;product=sugar porter family MFS transporter;protein_id=WP_002914018.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1214205 1215038 . + . ID=gene-LI478_RS06005;Name=LI478_RS06005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS06005 NZ_CP085478.1 Protein Homology CDS 1214205 1215038 . + 0 ID=cds-WP_009485449.1;Parent=gene-LI478_RS06005;Dbxref=Genbank:WP_009485449.1;Name=WP_009485449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228242.1;locus_tag=LI478_RS06005;product=aldose 1-epimerase;protein_id=WP_009485449.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1215121 1216257 . + . ID=gene-LI478_RS06010;Name=LI478_RS06010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS06010 NZ_CP085478.1 Protein Homology CDS 1215121 1216257 . + 0 ID=cds-WP_004149349.1;Parent=gene-LI478_RS06010;Dbxref=Genbank:WP_004149349.1;Name=WP_004149349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004149349.1;locus_tag=LI478_RS06010;product=3-phenylpropionate MFS transporter;protein_id=WP_004149349.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1216254 1217531 . - . ID=gene-LI478_RS06015;Name=csiE;gbkey=Gene;gene=csiE;gene_biotype=protein_coding;locus_tag=LI478_RS06015 NZ_CP085478.1 Protein Homology CDS 1216254 1217531 . - 0 ID=cds-WP_002914002.1;Parent=gene-LI478_RS06015;Dbxref=Genbank:WP_002914002.1;Name=WP_002914002.1;gbkey=CDS;gene=csiE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228240.1;locus_tag=LI478_RS06015;product=stationary phase inducible protein CsiE;protein_id=WP_002914002.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1217656 1218294 . + . ID=gene-LI478_RS06020;Name=LI478_RS06020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS06020 NZ_CP085478.1 Protein Homology CDS 1217656 1218294 . + 0 ID=cds-WP_004185124.1;Parent=gene-LI478_RS06020;Dbxref=Genbank:WP_004185124.1;Name=WP_004185124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019725302.1;locus_tag=LI478_RS06020;product=DUF1007 family protein;protein_id=WP_004185124.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1218285 1219265 . + . ID=gene-LI478_RS06025;Name=LI478_RS06025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS06025 NZ_CP085478.1 Protein Homology CDS 1218285 1219265 . + 0 ID=cds-WP_064153654.1;Parent=gene-LI478_RS06025;Dbxref=Genbank:WP_064153654.1;Name=WP_064153654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228238.1;locus_tag=LI478_RS06025;product=nickel/cobalt transporter;protein_id=WP_064153654.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1219365 1220201 . + . ID=gene-LI478_RS06030;Name=LI478_RS06030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS06030 NZ_CP085478.1 Protein Homology CDS 1219365 1220201 . + 0 ID=cds-WP_004174831.1;Parent=gene-LI478_RS06030;Dbxref=Genbank:WP_004174831.1;Name=WP_004174831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228237.1;locus_tag=LI478_RS06030;product=hypothetical protein;protein_id=WP_004174831.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1220248 1221051 . - . ID=gene-LI478_RS06035;Name=suhB;gbkey=Gene;gene=suhB;gene_biotype=protein_coding;locus_tag=LI478_RS06035 NZ_CP085478.1 Protein Homology CDS 1220248 1221051 . - 0 ID=cds-WP_002913995.1;Parent=gene-LI478_RS06035;Dbxref=Genbank:WP_002913995.1;Name=WP_002913995.1;Ontology_term=GO:0046854,GO:0046855,GO:0008934;gbkey=CDS;gene=suhB;go_function=inositol monophosphate 1-phosphatase activity|0008934||IEA;go_process=phosphatidylinositol phosphate biosynthetic process|0046854||IEA,inositol phosphate dephosphorylation|0046855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000553460.1;locus_tag=LI478_RS06035;product=inositol-1-monophosphatase;protein_id=WP_002913995.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1221172 1221906 . + . ID=gene-LI478_RS06040;Name=trmJ;gbkey=Gene;gene=trmJ;gene_biotype=protein_coding;locus_tag=LI478_RS06040 NZ_CP085478.1 Protein Homology CDS 1221172 1221906 . + 0 ID=cds-WP_002913994.1;Parent=gene-LI478_RS06040;Dbxref=Genbank:WP_002913994.1;Name=WP_002913994.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;gene=trmJ;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228235.1;locus_tag=LI478_RS06040;product=tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ;protein_id=WP_002913994.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1222141 1222632 . + . ID=gene-LI478_RS06045;Name=iscR;gbkey=Gene;gene=iscR;gene_biotype=protein_coding;locus_tag=LI478_RS06045 NZ_CP085478.1 Protein Homology CDS 1222141 1222632 . + 0 ID=cds-WP_002913993.1;Parent=gene-LI478_RS06045;Dbxref=Genbank:WP_002913993.1;Name=WP_002913993.1;gbkey=CDS;gene=iscR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002913993.1;locus_tag=LI478_RS06045;product=Fe-S cluster assembly transcriptional regulator IscR;protein_id=WP_002913993.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1222811 1224025 . + . ID=gene-LI478_RS06050;Name=iscS;gbkey=Gene;gene=iscS;gene_biotype=protein_coding;locus_tag=LI478_RS06050 NZ_CP085478.1 Protein Homology CDS 1222811 1224025 . + 0 ID=cds-WP_002913992.1;Parent=gene-LI478_RS06050;Dbxref=Genbank:WP_002913992.1;Name=WP_002913992.1;gbkey=CDS;gene=iscS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017459011.1;locus_tag=LI478_RS06050;product=cysteine desulfurase;protein_id=WP_002913992.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1224052 1224438 . + . ID=gene-LI478_RS06055;Name=iscU;gbkey=Gene;gene=iscU;gene_biotype=protein_coding;locus_tag=LI478_RS06055 NZ_CP085478.1 Protein Homology CDS 1224052 1224438 . + 0 ID=cds-WP_002913991.1;Parent=gene-LI478_RS06055;Dbxref=Genbank:WP_002913991.1;Name=WP_002913991.1;Ontology_term=GO:0016226,GO:0005198;gbkey=CDS;gene=iscU;go_function=structural molecule activity|0005198||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000331707.1;locus_tag=LI478_RS06055;product=Fe-S cluster assembly scaffold IscU;protein_id=WP_002913991.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1224456 1224779 . + . ID=gene-LI478_RS06060;Name=iscA;gbkey=Gene;gene=iscA;gene_biotype=protein_coding;locus_tag=LI478_RS06060 NZ_CP085478.1 Protein Homology CDS 1224456 1224779 . + 0 ID=cds-WP_002913979.1;Parent=gene-LI478_RS06060;Dbxref=Genbank:WP_002913979.1;Name=WP_002913979.1;gbkey=CDS;gene=iscA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228231.1;locus_tag=LI478_RS06060;product=iron-sulfur cluster assembly protein IscA;protein_id=WP_002913979.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1224854 1225369 . + . ID=gene-LI478_RS06065;Name=hscB;gbkey=Gene;gene=hscB;gene_biotype=protein_coding;locus_tag=LI478_RS06065 NZ_CP085478.1 Protein Homology CDS 1224854 1225369 . + 0 ID=cds-WP_004174835.1;Parent=gene-LI478_RS06065;Dbxref=Genbank:WP_004174835.1;Name=WP_004174835.1;Ontology_term=GO:0097428,GO:0051087;gbkey=CDS;gene=hscB;go_function=chaperone binding|0051087||IEA;go_process=protein maturation by iron-sulfur cluster transfer|0097428||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228230.1;locus_tag=LI478_RS06065;product=co-chaperone HscB;protein_id=WP_004174835.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1225385 1227235 . + . ID=gene-LI478_RS06070;Name=hscA;gbkey=Gene;gene=hscA;gene_biotype=protein_coding;locus_tag=LI478_RS06070 NZ_CP085478.1 Protein Homology CDS 1225385 1227235 . + 0 ID=cds-WP_004149343.1;Parent=gene-LI478_RS06070;Dbxref=Genbank:WP_004149343.1;Name=WP_004149343.1;Ontology_term=GO:0006457,GO:0005515;gbkey=CDS;gene=hscA;go_function=protein binding|0005515||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001559634.1;locus_tag=LI478_RS06070;product=Fe-S protein assembly chaperone HscA;protein_id=WP_004149343.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1227237 1227572 . + . ID=gene-LI478_RS06075;Name=fdx;gbkey=Gene;gene=fdx;gene_biotype=protein_coding;locus_tag=LI478_RS06075 NZ_CP085478.1 Protein Homology CDS 1227237 1227572 . + 0 ID=cds-WP_002913956.1;Parent=gene-LI478_RS06075;Dbxref=Genbank:WP_002913956.1;Name=WP_002913956.1;Ontology_term=GO:0016226;gbkey=CDS;gene=fdx;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683702.1;locus_tag=LI478_RS06075;product=ISC system 2Fe-2S type ferredoxin;protein_id=WP_002913956.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1227574 1227774 . + . ID=gene-LI478_RS06080;Name=iscX;gbkey=Gene;gene=iscX;gene_biotype=protein_coding;locus_tag=LI478_RS06080 NZ_CP085478.1 Protein Homology CDS 1227574 1227774 . + 0 ID=cds-WP_002913954.1;Parent=gene-LI478_RS06080;Dbxref=Genbank:WP_002913954.1;Name=WP_002913954.1;Ontology_term=GO:0016226,GO:0005506;gbkey=CDS;gene=iscX;go_function=iron ion binding|0005506||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004104502.1;locus_tag=LI478_RS06080;product=Fe-S cluster assembly protein IscX;protein_id=WP_002913954.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1227845 1229131 . + . ID=gene-LI478_RS06085;Name=pepB;gbkey=Gene;gene=pepB;gene_biotype=protein_coding;locus_tag=LI478_RS06085 NZ_CP085478.1 Protein Homology CDS 1227845 1229131 . + 0 ID=cds-WP_004185110.1;Parent=gene-LI478_RS06085;Dbxref=Genbank:WP_004185110.1;Name=WP_004185110.1;Ontology_term=GO:0006508,GO:0019538,GO:0030145,GO:0070006;gbkey=CDS;gene=pepB;go_function=manganese ion binding|0030145||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA,protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228226.1;locus_tag=LI478_RS06085;product=aminopeptidase PepB;protein_id=WP_004185110.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1229230 1230006 . + . ID=gene-LI478_RS06090;Name=sseB;gbkey=Gene;gene=sseB;gene_biotype=protein_coding;locus_tag=LI478_RS06090 NZ_CP085478.1 Protein Homology CDS 1229230 1230006 . + 0 ID=cds-WP_032103694.1;Parent=gene-LI478_RS06090;Dbxref=Genbank:WP_032103694.1;Name=WP_032103694.1;gbkey=CDS;gene=sseB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228225.1;locus_tag=LI478_RS06090;product=enhanced serine sensitivity protein SseB;protein_id=WP_032103694.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1230077 1230919 . - . ID=gene-LI478_RS06095;Name=LI478_RS06095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS06095 NZ_CP085478.1 Protein Homology CDS 1230077 1230919 . - 0 ID=cds-WP_021463547.1;Parent=gene-LI478_RS06095;Dbxref=Genbank:WP_021463547.1;Name=WP_021463547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228224.1;locus_tag=LI478_RS06095;product=hypothetical protein;protein_id=WP_021463547.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1231146 1232003 . - . ID=gene-LI478_RS06100;Name=sseA;gbkey=Gene;gene=sseA;gene_biotype=protein_coding;locus_tag=LI478_RS06100 NZ_CP085478.1 Protein Homology CDS 1231146 1232003 . - 0 ID=cds-WP_002913950.1;Parent=gene-LI478_RS06100;Dbxref=Genbank:WP_002913950.1;Name=WP_002913950.1;Ontology_term=GO:0004792;gbkey=CDS;gene=sseA;go_function=thiosulfate sulfurtransferase activity|0004792||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228223.1;locus_tag=LI478_RS06100;product=3-mercaptopyruvate sulfurtransferase;protein_id=WP_002913950.1;transl_table=11 NZ_CP085478.1 RefSeq pseudogene 1232209 1237159 . + . ID=gene-LI478_RS06105;Name=LI478_RS06105;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS06105;pseudo=true NZ_CP085478.1 Protein Homology CDS 1232209 1237159 . + 0 ID=cds-LI478_RS06105;Parent=gene-LI478_RS06105;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228222.1;locus_tag=LI478_RS06105;product=alpha-2-macroglobulin;pseudo=true;transl_table=11 NZ_CP085478.1 RefSeq gene 1237160 1239484 . + . ID=gene-LI478_RS06110;Name=pbpC;gbkey=Gene;gene=pbpC;gene_biotype=protein_coding;locus_tag=LI478_RS06110 NZ_CP085478.1 Protein Homology CDS 1237160 1239484 . + 0 ID=cds-WP_032415367.1;Parent=gene-LI478_RS06110;Dbxref=Genbank:WP_032415367.1;Name=WP_032415367.1;Note=penicillin-binding protein 1C;Ontology_term=GO:0009252,GO:0008658,GO:0008955;gbkey=CDS;gene=pbpC;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228221.1;locus_tag=LI478_RS06110;product=peptidoglycan glycosyltransferase PbpC;protein_id=WP_032415367.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1239645 1240076 . + . ID=gene-LI478_RS06115;Name=ndk;gbkey=Gene;gene=ndk;gene_biotype=protein_coding;locus_tag=LI478_RS06115 NZ_CP085478.1 Protein Homology CDS 1239645 1240076 . + 0 ID=cds-WP_004144312.1;Parent=gene-LI478_RS06115;Dbxref=Genbank:WP_004144312.1;Name=WP_004144312.1;Ontology_term=GO:0006165,GO:0004550;gbkey=CDS;gene=ndk;go_function=nucleoside diphosphate kinase activity|0004550||IEA;go_process=nucleoside diphosphate phosphorylation|0006165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000963848.1;locus_tag=LI478_RS06115;product=nucleoside-diphosphate kinase;protein_id=WP_004144312.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1240560 1241726 . + . ID=gene-LI478_RS06120;Name=LI478_RS06120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS06120 NZ_CP085478.1 Protein Homology CDS 1240560 1241726 . + 0 ID=cds-WP_002913894.1;Parent=gene-LI478_RS06120;Dbxref=Genbank:WP_002913894.1;Name=WP_002913894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228219.1;locus_tag=LI478_RS06120;product=bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN;protein_id=WP_002913894.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1242003 1242998 . + . ID=gene-LI478_RS06125;Name=rodZ;gbkey=Gene;gene=rodZ;gene_biotype=protein_coding;locus_tag=LI478_RS06125 NZ_CP085478.1 Protein Homology CDS 1242003 1242998 . + 0 ID=cds-WP_004149336.1;Parent=gene-LI478_RS06125;Dbxref=Genbank:WP_004149336.1;Name=WP_004149336.1;Ontology_term=GO:0008360,GO:0003677,GO:0016020;gbkey=CDS;gene=rodZ;go_component=membrane|0016020||IEA;go_function=DNA binding|0003677||IEA;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228218.1;locus_tag=LI478_RS06125;product=cytoskeleton protein RodZ;protein_id=WP_004149336.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1243025 1244146 . + . ID=gene-LI478_RS06130;Name=ispG;gbkey=Gene;gene=ispG;gene_biotype=protein_coding;gene_synonym=gcpE;locus_tag=LI478_RS06130 NZ_CP085478.1 Protein Homology CDS 1243025 1244146 . + 0 ID=cds-WP_002913892.1;Parent=gene-LI478_RS06130;Dbxref=Genbank:WP_002913892.1;Name=WP_002913892.1;Ontology_term=GO:0044237,GO:0046429;gbkey=CDS;gene=ispG;go_function=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity|0046429||IEA;go_process=cellular metabolic process|0044237||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228217.1;locus_tag=LI478_RS06130;product=flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase;protein_id=WP_002913892.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1244238 1245512 . + . ID=gene-LI478_RS06135;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=LI478_RS06135 NZ_CP085478.1 Protein Homology CDS 1244238 1245512 . + 0 ID=cds-WP_004149335.1;Parent=gene-LI478_RS06135;Dbxref=Genbank:WP_004149335.1;Name=WP_004149335.1;Ontology_term=GO:0006427,GO:0004821,GO:0005737;gbkey=CDS;gene=hisS;go_component=cytoplasm|0005737||IEA;go_function=histidine-tRNA ligase activity|0004821||IEA;go_process=histidyl-tRNA aminoacylation|0006427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311403.1;locus_tag=LI478_RS06135;product=histidine--tRNA ligase;protein_id=WP_004149335.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1245547 1246167 . + . ID=gene-LI478_RS06140;Name=LI478_RS06140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS06140 NZ_CP085478.1 Protein Homology CDS 1245547 1246167 . + 0 ID=cds-WP_002913890.1;Parent=gene-LI478_RS06140;Dbxref=Genbank:WP_002913890.1;Name=WP_002913890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228215.1;locus_tag=LI478_RS06140;product=YfgM family protein;protein_id=WP_002913890.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1246178 1247356 . + . ID=gene-LI478_RS06145;Name=bamB;gbkey=Gene;gene=bamB;gene_biotype=protein_coding;locus_tag=LI478_RS06145 NZ_CP085478.1 Protein Homology CDS 1246178 1247356 . + 0 ID=cds-WP_002913889.1;Parent=gene-LI478_RS06145;Dbxref=Genbank:WP_002913889.1;Name=WP_002913889.1;Ontology_term=GO:0005515;gbkey=CDS;gene=bamB;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228214.1;locus_tag=LI478_RS06145;product=outer membrane protein assembly factor BamB;protein_id=WP_002913889.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1247470 1248948 . + . ID=gene-LI478_RS06150;Name=der;gbkey=Gene;gene=der;gene_biotype=protein_coding;locus_tag=LI478_RS06150 NZ_CP085478.1 Protein Homology CDS 1247470 1248948 . + 0 ID=cds-WP_004144309.1;Parent=gene-LI478_RS06150;Dbxref=Genbank:WP_004144309.1;Name=WP_004144309.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=der;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461454.1;locus_tag=LI478_RS06150;product=ribosome biogenesis GTPase Der;protein_id=WP_004144309.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1249315 1250007 . + . ID=gene-LI478_RS06155;Name=LI478_RS06155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS06155 NZ_CP085478.1 Protein Homology CDS 1249315 1250007 . + 0 ID=cds-WP_032438070.1;Parent=gene-LI478_RS06155;Dbxref=Genbank:WP_032438070.1;Name=WP_032438070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009485464.1;locus_tag=LI478_RS06155;product=hypothetical protein;protein_id=WP_032438070.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1250229 1250708 . + . ID=gene-LI478_RS06160;Name=tssD;gbkey=Gene;gene=tssD;gene_biotype=protein_coding;locus_tag=LI478_RS06160 NZ_CP085478.1 Protein Homology CDS 1250229 1250708 . + 0 ID=cds-WP_020317242.1;Parent=gene-LI478_RS06160;Dbxref=Genbank:WP_020317242.1;Name=WP_020317242.1;Ontology_term=GO:0003674;gbkey=CDS;gene=tssD;go_function=molecular_function|0003674||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006810320.1;locus_tag=LI478_RS06160;product=type VI secretion system tube protein TssD;protein_id=WP_020317242.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1250892 1251971 . + . ID=gene-LI478_RS06165;Name=LI478_RS06165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS06165 NZ_CP085478.1 Protein Homology CDS 1250892 1251971 . + 0 ID=cds-WP_021313079.1;Parent=gene-LI478_RS06165;Dbxref=Genbank:WP_021313079.1;Name=WP_021313079.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228212.1;locus_tag=LI478_RS06165;product=Gfo/Idh/MocA family oxidoreductase;protein_id=WP_021313079.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1252021 1252239 . + . ID=gene-LI478_RS06170;Name=LI478_RS06170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS06170 NZ_CP085478.1 Protein Homology CDS 1252021 1252239 . + 0 ID=cds-WP_004144303.1;Parent=gene-LI478_RS06170;Dbxref=Genbank:WP_004144303.1;Name=WP_004144303.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228211.1;locus_tag=LI478_RS06170;product=zinc ribbon domain-containing protein;protein_id=WP_004144303.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1252223 1253614 . - . ID=gene-LI478_RS06175;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=LI478_RS06175 NZ_CP085478.1 Protein Homology CDS 1252223 1253614 . - 0 ID=cds-WP_021313077.1;Parent=gene-LI478_RS06175;Dbxref=Genbank:WP_021313077.1;Name=WP_021313077.1;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;gene=xseA;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228210.1;locus_tag=LI478_RS06175;product=exodeoxyribonuclease VII large subunit;protein_id=WP_021313077.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1253773 1255239 . + . ID=gene-LI478_RS06180;Name=guaB;gbkey=Gene;gene=guaB;gene_biotype=protein_coding;locus_tag=LI478_RS06180 NZ_CP085478.1 Protein Homology CDS 1253773 1255239 . + 0 ID=cds-WP_004151980.1;Parent=gene-LI478_RS06180;Dbxref=Genbank:WP_004151980.1;Name=WP_004151980.1;Ontology_term=GO:0009152,GO:0003938;gbkey=CDS;gene=guaB;go_function=IMP dehydrogenase activity|0003938||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004151980.1;locus_tag=LI478_RS06180;product=IMP dehydrogenase;protein_id=WP_004151980.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1255307 1256884 . + . ID=gene-LI478_RS06185;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=LI478_RS06185 NZ_CP085478.1 Protein Homology CDS 1255307 1256884 . + 0 ID=cds-WP_004151979.1;Parent=gene-LI478_RS06185;Dbxref=Genbank:WP_004151979.1;Name=WP_004151979.1;Ontology_term=GO:0006177,GO:0003922,GO:0005524,GO:0016462;gbkey=CDS;gene=guaA;go_function=GMP synthase (glutamine-hydrolyzing) activity|0003922||IEA,ATP binding|0005524||IEA,pyrophosphatase activity|0016462||IEA;go_process=GMP biosynthetic process|0006177||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130181.1;locus_tag=LI478_RS06185;product=glutamine-hydrolyzing GMP synthase;protein_id=WP_004151979.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1256979 1258847 . - . ID=gene-LI478_RS06190;Name=LI478_RS06190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS06190 NZ_CP085478.1 Protein Homology CDS 1256979 1258847 . - 0 ID=cds-WP_064153607.1;Parent=gene-LI478_RS06190;Dbxref=Genbank:WP_064153607.1;Name=WP_064153607.1;Ontology_term=GO:0008484;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228206.1;locus_tag=LI478_RS06190;product=sulfatase-like hydrolase/transferase;protein_id=WP_064153607.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1258831 1260009 . - . ID=gene-LI478_RS06195;Name=LI478_RS06195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS06195 NZ_CP085478.1 Protein Homology CDS 1258831 1260009 . - 0 ID=cds-WP_023280404.1;Parent=gene-LI478_RS06195;Dbxref=Genbank:WP_023280404.1;Name=WP_023280404.1;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004162150.1;locus_tag=LI478_RS06195;product=anaerobic sulfatase maturase;protein_id=WP_023280404.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1260303 1261535 . - . ID=gene-LI478_RS06200;Name=LI478_RS06200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS06200 NZ_CP085478.1 Protein Homology CDS 1260303 1261535 . - 0 ID=cds-WP_023280403.1;Parent=gene-LI478_RS06200;Dbxref=Genbank:WP_023280403.1;Name=WP_023280403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228204.1;locus_tag=LI478_RS06200;product=MFS transporter;protein_id=WP_023280403.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1261609 1262520 . + . ID=gene-LI478_RS06205;Name=LI478_RS06205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS06205 NZ_CP085478.1 Protein Homology CDS 1261609 1262520 . + 0 ID=cds-WP_074185300.1;Parent=gene-LI478_RS06205;Dbxref=Genbank:WP_074185300.1;Name=WP_074185300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228203.1;locus_tag=LI478_RS06205;product=LysR family transcriptional regulator;protein_id=WP_074185300.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1262614 1262787 . - . ID=gene-LI478_RS06210;Name=LI478_RS06210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS06210 NZ_CP085478.1 Protein Homology CDS 1262614 1262787 . - 0 ID=cds-WP_004174861.1;Parent=gene-LI478_RS06210;Dbxref=Genbank:WP_004174861.1;Name=WP_004174861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228202.1;locus_tag=LI478_RS06210;product=YfgG family protein;protein_id=WP_004174861.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1263158 1265386 . + . ID=gene-LI478_RS06215;Name=LI478_RS06215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS06215 NZ_CP085478.1 Protein Homology CDS 1263158 1265386 . + 0 ID=cds-WP_002913841.1;Parent=gene-LI478_RS06215;Dbxref=Genbank:WP_002913841.1;Name=WP_002913841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228201.1;locus_tag=LI478_RS06215;product=EAL domain-containing protein;protein_id=WP_002913841.1;transl_table=11 NZ_CP085478.1 RefSeq pseudogene 1265440 1266971 . - . ID=gene-LI478_RS06220;Name=ppx;gbkey=Gene;gene=ppx;gene_biotype=pseudogene;locus_tag=LI478_RS06220;pseudo=true NZ_CP085478.1 Protein Homology CDS 1265440 1266971 . - 0 ID=cds-LI478_RS06220;Parent=gene-LI478_RS06220;Note=frameshifted;Ontology_term=GO:0006798,GO:0000287,GO:0004309;gbkey=CDS;gene=ppx;go_function=magnesium ion binding|0000287||IEA,exopolyphosphatase activity|0004309||IEA;go_process=polyphosphate catabolic process|0006798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002913839.1;locus_tag=LI478_RS06220;product=exopolyphosphatase;pseudo=true;transl_table=11 NZ_CP085478.1 RefSeq gene 1266975 1269035 . - . ID=gene-LI478_RS06225;Name=ppk1;gbkey=Gene;gene=ppk1;gene_biotype=protein_coding;locus_tag=LI478_RS06225 NZ_CP085478.1 Protein Homology CDS 1266975 1269035 . - 0 ID=cds-WP_002913838.1;Parent=gene-LI478_RS06225;Dbxref=Genbank:WP_002913838.1;Name=WP_002913838.1;Ontology_term=GO:0006799,GO:0008976,GO:0009358;gbkey=CDS;gene=ppk1;go_component=polyphosphate kinase complex|0009358||IEA;go_function=polyphosphate kinase activity|0008976||IEA;go_process=polyphosphate biosynthetic process|0006799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228199.1;locus_tag=LI478_RS06225;product=polyphosphate kinase 1;protein_id=WP_002913838.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1269215 1269856 . - . ID=gene-LI478_RS06230;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=LI478_RS06230 NZ_CP085478.1 Protein Homology CDS 1269215 1269856 . - 0 ID=cds-WP_004145656.1;Parent=gene-LI478_RS06230;Dbxref=Genbank:WP_004145656.1;Name=WP_004145656.1;Ontology_term=GO:0009152,GO:0004644;gbkey=CDS;gene=purN;go_function=phosphoribosylglycinamide formyltransferase activity|0004644||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228198.1;locus_tag=LI478_RS06230;product=phosphoribosylglycinamide formyltransferase;protein_id=WP_004145656.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1269853 1270890 . - . ID=gene-LI478_RS06235;Name=purM;gbkey=Gene;gene=purM;gene_biotype=protein_coding;locus_tag=LI478_RS06235 NZ_CP085478.1 Protein Homology CDS 1269853 1270890 . - 0 ID=cds-WP_002913836.1;Parent=gene-LI478_RS06235;Dbxref=Genbank:WP_002913836.1;Name=WP_002913836.1;Ontology_term=GO:0006189,GO:0009152,GO:0004641;gbkey=CDS;gene=purM;go_function=phosphoribosylformylglycinamidine cyclo-ligase activity|0004641||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228197.1;locus_tag=LI478_RS06235;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=WP_002913836.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1271154 1272047 . + . ID=gene-LI478_RS06240;Name=LI478_RS06240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS06240 NZ_CP085478.1 Protein Homology CDS 1271154 1272047 . + 0 ID=cds-WP_021312780.1;Parent=gene-LI478_RS06240;Dbxref=Genbank:WP_021312780.1;Name=WP_021312780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228196.1;locus_tag=LI478_RS06240;product=ROK family protein;protein_id=WP_021312780.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1272057 1273490 . + . ID=gene-LI478_RS06245;Name=LI478_RS06245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS06245 NZ_CP085478.1 Protein Homology CDS 1272057 1273490 . + 0 ID=cds-WP_004174870.1;Parent=gene-LI478_RS06245;Dbxref=Genbank:WP_004174870.1;Name=WP_004174870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004149286.1;locus_tag=LI478_RS06245;product=6-phospho-beta-glucosidase;protein_id=WP_004174870.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1273708 1274334 . + . ID=gene-LI478_RS06250;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=LI478_RS06250 NZ_CP085478.1 Protein Homology CDS 1273708 1274334 . + 0 ID=cds-WP_002913827.1;Parent=gene-LI478_RS06250;Dbxref=Genbank:WP_002913827.1;Name=WP_002913827.1;Ontology_term=GO:0009116,GO:0004845;gbkey=CDS;gene=upp;go_function=uracil phosphoribosyltransferase activity|0004845||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295473.1;locus_tag=LI478_RS06250;product=uracil phosphoribosyltransferase;protein_id=WP_002913827.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1274430 1275716 . + . ID=gene-LI478_RS06255;Name=uraA;gbkey=Gene;gene=uraA;gene_biotype=protein_coding;locus_tag=LI478_RS06255 NZ_CP085478.1 Protein Homology CDS 1274430 1275716 . + 0 ID=cds-WP_002913824.1;Parent=gene-LI478_RS06255;Dbxref=Genbank:WP_002913824.1;Name=WP_002913824.1;Ontology_term=GO:0022857;gbkey=CDS;gene=uraA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228193.1;locus_tag=LI478_RS06255;product=uracil permease;protein_id=WP_002913824.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1275815 1276516 . + . ID=gene-LI478_RS06260;Name=LI478_RS06260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS06260 NZ_CP085478.1 Protein Homology CDS 1275815 1276516 . + 0 ID=cds-WP_020947395.1;Parent=gene-LI478_RS06260;Dbxref=Genbank:WP_020947395.1;Name=WP_020947395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416991.2;locus_tag=LI478_RS06260;product=DnaA inactivator Hda;protein_id=WP_020947395.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1276513 1277424 . - . ID=gene-LI478_RS06265;Name=LI478_RS06265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS06265 NZ_CP085478.1 Protein Homology CDS 1276513 1277424 . - 0 ID=cds-WP_002913812.1;Parent=gene-LI478_RS06265;Dbxref=Genbank:WP_002913812.1;Name=WP_002913812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228191.1;locus_tag=LI478_RS06265;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WP_002913812.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1277552 1277911 . - . ID=gene-LI478_RS06270;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=protein_coding;locus_tag=LI478_RS06270 NZ_CP085478.1 Protein Homology CDS 1277552 1277911 . - 0 ID=cds-WP_002913810.1;Parent=gene-LI478_RS06270;Dbxref=Genbank:WP_002913810.1;Name=WP_002913810.1;Note=This arsenate reductase requires both glutathione and glutaredoxin to convert arsenate to arsenite%2C after which the efflux transporter formed by ArsA and ArsB can extrude the arsenite from the cell%2C providing resistance.;Ontology_term=GO:0008794;gbkey=CDS;gene=arsC;go_function=arsenate reductase (glutaredoxin) activity|0008794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228190.1;locus_tag=LI478_RS06270;product=arsenate reductase (glutaredoxin);protein_id=WP_002913810.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1277921 1279384 . - . ID=gene-LI478_RS06275;Name=bepA;gbkey=Gene;gene=bepA;gene_biotype=protein_coding;locus_tag=LI478_RS06275 NZ_CP085478.1 Protein Homology CDS 1277921 1279384 . - 0 ID=cds-WP_002913807.1;Parent=gene-LI478_RS06275;Dbxref=Genbank:WP_002913807.1;Name=WP_002913807.1;gbkey=CDS;gene=bepA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228189.1;locus_tag=LI478_RS06275;product=beta-barrel assembly-enhancing protease;protein_id=WP_002913807.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1279436 1279552 . + . ID=gene-LI478_RS06280;Name=LI478_RS06280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS06280 NZ_CP085478.1 Protein Homology CDS 1279436 1279552 . + 0 ID=cds-WP_004221267.1;Parent=gene-LI478_RS06280;Dbxref=Genbank:WP_004221267.1;Name=WP_004221267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228188.1;locus_tag=LI478_RS06280;product=hypothetical protein;protein_id=WP_004221267.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1279607 1280668 . + . ID=gene-LI478_RS06285;Name=LI478_RS06285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS06285 NZ_CP085478.1 Protein Homology CDS 1279607 1280668 . + 0 ID=cds-WP_002913806.1;Parent=gene-LI478_RS06285;Dbxref=Genbank:WP_002913806.1;Name=WP_002913806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228187.1;locus_tag=LI478_RS06285;product=AI-2E family transporter;protein_id=WP_002913806.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1280730 1281200 . - . ID=gene-LI478_RS06290;Name=bcp;gbkey=Gene;gene=bcp;gene_biotype=protein_coding;locus_tag=LI478_RS06290 NZ_CP085478.1 Protein Homology CDS 1280730 1281200 . - 0 ID=cds-WP_002913805.1;Parent=gene-LI478_RS06290;Dbxref=Genbank:WP_002913805.1;Name=WP_002913805.1;Ontology_term=GO:0016209,GO:0016491;gbkey=CDS;gene=bcp;go_function=antioxidant activity|0016209||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228186.1;locus_tag=LI478_RS06290;product=thioredoxin-dependent thiol peroxidase;protein_id=WP_002913805.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1281204 1281770 . - . ID=gene-LI478_RS06295;Name=LI478_RS06295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS06295 NZ_CP085478.1 Protein Homology CDS 1281204 1281770 . - 0 ID=cds-WP_002913804.1;Parent=gene-LI478_RS06295;Dbxref=Genbank:WP_002913804.1;Name=WP_002913804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228185.1;locus_tag=LI478_RS06295;product=glycine cleavage system transcriptional repressor;protein_id=WP_002913804.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1281924 1282802 . + . ID=gene-LI478_RS06300;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=LI478_RS06300 NZ_CP085478.1 Protein Homology CDS 1281924 1282802 . + 0 ID=cds-WP_002913803.1;Parent=gene-LI478_RS06300;Dbxref=Genbank:WP_002913803.1;Name=WP_002913803.1;Ontology_term=GO:0009089,GO:0008840;gbkey=CDS;gene=dapA;go_function=4-hydroxy-tetrahydrodipicolinate synthase activity|0008840||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001311023.1;locus_tag=LI478_RS06300;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=WP_002913803.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1282819 1283853 . + . ID=gene-LI478_RS06305;Name=bamC;gbkey=Gene;gene=bamC;gene_biotype=protein_coding;locus_tag=LI478_RS06305 NZ_CP085478.1 Protein Homology CDS 1282819 1283853 . + 0 ID=cds-WP_002913802.1;Parent=gene-LI478_RS06305;Dbxref=Genbank:WP_002913802.1;Name=WP_002913802.1;gbkey=CDS;gene=bamC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228183.1;locus_tag=LI478_RS06305;product=outer membrane protein assembly factor BamC;protein_id=WP_002913802.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1284070 1284783 . + . ID=gene-LI478_RS06310;Name=LI478_RS06310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS06310 NZ_CP085478.1 Protein Homology CDS 1284070 1284783 . + 0 ID=cds-WP_002913801.1;Parent=gene-LI478_RS06310;Dbxref=Genbank:WP_002913801.1;Name=WP_002913801.1;Ontology_term=GO:0006164,GO:0004639;gbkey=CDS;go_function=phosphoribosylaminoimidazolesuccinocarboxamide synthase activity|0004639||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017458944.1;locus_tag=LI478_RS06310;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=WP_002913801.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1284903 1285778 . + . ID=gene-LI478_RS06315;Name=LI478_RS06315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS06315 NZ_CP085478.1 Protein Homology CDS 1284903 1285778 . + 0 ID=cds-WP_002913800.1;Parent=gene-LI478_RS06315;Dbxref=Genbank:WP_002913800.1;Name=WP_002913800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228181.1;locus_tag=LI478_RS06315;product=neutral zinc metallopeptidase;protein_id=WP_002913800.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1285788 1287791 . + . ID=gene-LI478_RS06320;Name=LI478_RS06320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS06320 NZ_CP085478.1 Protein Homology CDS 1285788 1287791 . + 0 ID=cds-WP_064153611.1;Parent=gene-LI478_RS06320;Dbxref=Genbank:WP_064153611.1;Name=WP_064153611.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020317228.1;locus_tag=LI478_RS06320;product=GNAT family N-acetyltransferase;protein_id=WP_064153611.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1287868 1288563 . + . ID=gene-LI478_RS06325;Name=ypfH;gbkey=Gene;gene=ypfH;gene_biotype=protein_coding;locus_tag=LI478_RS06325 NZ_CP085478.1 Protein Homology CDS 1287868 1288563 . + 0 ID=cds-WP_002913770.1;Parent=gene-LI478_RS06325;Dbxref=Genbank:WP_002913770.1;Name=WP_002913770.1;Ontology_term=GO:0016787;gbkey=CDS;gene=ypfH;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228178.1;locus_tag=LI478_RS06325;product=esterase;protein_id=WP_002913770.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1288612 1288815 . - . ID=gene-LI478_RS06330;Name=LI478_RS06330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS06330 NZ_CP085478.1 Protein Homology CDS 1288612 1288815 . - 0 ID=cds-WP_002913768.1;Parent=gene-LI478_RS06330;Dbxref=Genbank:WP_002913768.1;Name=WP_002913768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228177.1;locus_tag=LI478_RS06330;product=YpfN family protein;protein_id=WP_002913768.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1288842 1289969 . - . ID=gene-LI478_RS06335;Name=dapE;gbkey=Gene;gene=dapE;gene_biotype=protein_coding;locus_tag=LI478_RS06335 NZ_CP085478.1 Protein Homology CDS 1288842 1289969 . - 0 ID=cds-WP_002913766.1;Parent=gene-LI478_RS06335;Dbxref=Genbank:WP_002913766.1;Name=WP_002913766.1;Ontology_term=GO:0009089,GO:0009014;gbkey=CDS;gene=dapE;go_function=succinyl-diaminopimelate desuccinylase activity|0009014||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020078199.1;locus_tag=LI478_RS06335;product=succinyl-diaminopimelate desuccinylase;protein_id=WP_002913766.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1289973 1290326 . - . ID=gene-LI478_RS06340;Name=LI478_RS06340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS06340 NZ_CP085478.1 Protein Homology CDS 1289973 1290326 . - 0 ID=cds-WP_002913764.1;Parent=gene-LI478_RS06340;Dbxref=Genbank:WP_002913764.1;Name=WP_002913764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228175.1;locus_tag=LI478_RS06340;product=ArsC family reductase;protein_id=WP_002913764.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1290692 1290751 . + . ID=gene-LI478_RS06345;Name=ypfM;gbkey=Gene;gene=ypfM;gene_biotype=protein_coding;locus_tag=LI478_RS06345 NZ_CP085478.1 Protein Homology CDS 1290692 1290751 . + 0 ID=cds-WP_100181659.1;Parent=gene-LI478_RS06345;Dbxref=Genbank:WP_100181659.1;Name=WP_100181659.1;gbkey=CDS;gene=ypfM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165325.1;locus_tag=LI478_RS06345;product=protein YpfM;protein_id=WP_100181659.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1290879 1293992 . - . ID=gene-LI478_RS06350;Name=acrD;gbkey=Gene;gene=acrD;gene_biotype=protein_coding;locus_tag=LI478_RS06350 NZ_CP085478.1 Protein Homology CDS 1290879 1293992 . - 0 ID=cds-WP_032415298.1;Parent=gene-LI478_RS06350;Dbxref=Genbank:WP_032415298.1;Name=WP_032415298.1;Ontology_term=GO:0042908,GO:0015562;gbkey=CDS;gene=acrD;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=xenobiotic transport|0042908||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228174.1;locus_tag=LI478_RS06350;product=multidrug efflux RND transporter permease AcrD;protein_id=WP_032415298.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1294365 1296347 . + . ID=gene-LI478_RS06355;Name=aegA;gbkey=Gene;gene=aegA;gene_biotype=protein_coding;locus_tag=LI478_RS06355 NZ_CP085478.1 Protein Homology CDS 1294365 1296347 . + 0 ID=cds-WP_004145639.1;Parent=gene-LI478_RS06355;Dbxref=Genbank:WP_004145639.1;Name=WP_004145639.1;Ontology_term=GO:0016491;gbkey=CDS;gene=aegA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228173.1;locus_tag=LI478_RS06355;product=formate-dependent uric acid utilization protein AegA;protein_id=WP_004145639.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1296406 1297002 . + . ID=gene-LI478_RS06360;Name=nudK;gbkey=Gene;gene=nudK;gene_biotype=protein_coding;locus_tag=LI478_RS06360 NZ_CP085478.1 Protein Homology CDS 1296406 1297002 . + 0 ID=cds-WP_002913754.1;Parent=gene-LI478_RS06360;Dbxref=Genbank:WP_002913754.1;Name=WP_002913754.1;Ontology_term=GO:0016818,GO:0046872;gbkey=CDS;gene=nudK;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228172.1;locus_tag=LI478_RS06360;product=GDP-mannose pyrophosphatase NudK;protein_id=WP_002913754.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1297066 1298112 . + . ID=gene-LI478_RS06365;Name=LI478_RS06365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS06365 NZ_CP085478.1 Protein Homology CDS 1297066 1298112 . + 0 ID=cds-WP_004149270.1;Parent=gene-LI478_RS06365;Dbxref=Genbank:WP_004149270.1;Name=WP_004149270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014907129.1;locus_tag=LI478_RS06365;product=DUF1176 domain-containing protein;protein_id=WP_004149270.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1298102 1300096 . - . ID=gene-LI478_RS06370;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=LI478_RS06370 NZ_CP085478.1 Protein Homology CDS 1298102 1300096 . - 0 ID=cds-WP_004149269.1;Parent=gene-LI478_RS06370;Dbxref=Genbank:WP_004149269.1;Name=WP_004149269.1;Ontology_term=GO:0006098,GO:0004802,GO:0005737;gbkey=CDS;gene=tkt;go_component=cytoplasm|0005737||IEA;go_function=transketolase activity|0004802||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228169.1;locus_tag=LI478_RS06370;product=transketolase;protein_id=WP_004149269.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1300113 1301069 . - . ID=gene-LI478_RS06375;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=LI478_RS06375 NZ_CP085478.1 Protein Homology CDS 1300113 1301069 . - 0 ID=cds-WP_025862051.1;Parent=gene-LI478_RS06375;Dbxref=Genbank:WP_025862051.1;Name=WP_025862051.1;Ontology_term=GO:0006098,GO:0004801;gbkey=CDS;gene=tal;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228168.1;locus_tag=LI478_RS06375;product=transaldolase;protein_id=WP_025862051.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1301364 1303643 . + . ID=gene-LI478_RS06380;Name=maeB;gbkey=Gene;gene=maeB;gene_biotype=protein_coding;locus_tag=LI478_RS06380 NZ_CP085478.1 Protein Homology CDS 1301364 1303643 . + 0 ID=cds-WP_002913731.1;Parent=gene-LI478_RS06380;Dbxref=Genbank:WP_002913731.1;Name=WP_002913731.1;gbkey=CDS;gene=maeB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228167.1;locus_tag=LI478_RS06380;product=NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase;protein_id=WP_002913731.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1303862 1304197 . + . ID=gene-LI478_RS06385;Name=eutS;gbkey=Gene;gene=eutS;gene_biotype=protein_coding;locus_tag=LI478_RS06385 NZ_CP085478.1 Protein Homology CDS 1303862 1304197 . + 0 ID=cds-WP_025862050.1;Parent=gene-LI478_RS06385;Dbxref=Genbank:WP_025862050.1;Name=WP_025862050.1;gbkey=CDS;gene=eutS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228166.1;locus_tag=LI478_RS06385;product=ethanolamine utilization microcompartment protein EutS;protein_id=WP_025862050.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1304210 1304689 . + . ID=gene-LI478_RS06390;Name=eutP;gbkey=Gene;gene=eutP;gene_biotype=protein_coding;locus_tag=LI478_RS06390 NZ_CP085478.1 Protein Homology CDS 1304210 1304689 . + 0 ID=cds-WP_002913727.1;Parent=gene-LI478_RS06390;Dbxref=Genbank:WP_002913727.1;Name=WP_002913727.1;gbkey=CDS;gene=eutP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228165.1;locus_tag=LI478_RS06390;product=ethanolamine utilization acetate kinase EutP;protein_id=WP_002913727.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1304667 1305356 . + . ID=gene-LI478_RS06395;Name=eutQ;gbkey=Gene;gene=eutQ;gene_biotype=protein_coding;locus_tag=LI478_RS06395 NZ_CP085478.1 Protein Homology CDS 1304667 1305356 . + 0 ID=cds-WP_004185056.1;Parent=gene-LI478_RS06395;Dbxref=Genbank:WP_004185056.1;Name=WP_004185056.1;gbkey=CDS;gene=eutQ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228164.1;locus_tag=LI478_RS06395;product=ethanolamine utilization acetate kinase EutQ;protein_id=WP_004185056.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1305353 1306159 . + . ID=gene-LI478_RS06400;Name=eutT;gbkey=Gene;gene=eutT;gene_biotype=protein_coding;locus_tag=LI478_RS06400 NZ_CP085478.1 Protein Homology CDS 1305353 1306159 . + 0 ID=cds-WP_002913723.1;Parent=gene-LI478_RS06400;Dbxref=Genbank:WP_002913723.1;Name=WP_002913723.1;Ontology_term=GO:0006580,GO:0008817;gbkey=CDS;gene=eutT;go_function=corrinoid adenosyltransferase activity|0008817||IEA;go_process=ethanolamine metabolic process|0006580||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228163.1;locus_tag=LI478_RS06400;product=ethanolamine utilization cob(I)yrinic acid a%2Cc-diamide adenosyltransferase EutT;protein_id=WP_002913723.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1306149 1307165 . + . ID=gene-LI478_RS06405;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=LI478_RS06405 NZ_CP085478.1 Protein Homology CDS 1306149 1307165 . + 0 ID=cds-WP_064153613.1;Parent=gene-LI478_RS06405;Dbxref=Genbank:WP_064153613.1;Name=WP_064153613.1;Ontology_term=GO:0006086,GO:0008959;gbkey=CDS;gene=pta;go_function=phosphate acetyltransferase activity|0008959||IEA;go_process=acetyl-CoA biosynthetic process from pyruvate|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228162.1;locus_tag=LI478_RS06405;product=phosphate acetyltransferase;protein_id=WP_064153613.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1307204 1307494 . + . ID=gene-LI478_RS06410;Name=eutM;gbkey=Gene;gene=eutM;gene_biotype=protein_coding;locus_tag=LI478_RS06410 NZ_CP085478.1 Protein Homology CDS 1307204 1307494 . + 0 ID=cds-WP_000387720.1;Parent=gene-LI478_RS06410;Dbxref=Genbank:WP_000387720.1;Name=WP_000387720.1;gbkey=CDS;gene=eutM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228161.1;locus_tag=LI478_RS06410;product=ethanolamine utilization microcompartment protein EutM;protein_id=WP_000387720.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1307623 1307910 . + . ID=gene-LI478_RS06415;Name=eutN;gbkey=Gene;gene=eutN;gene_biotype=protein_coding;locus_tag=LI478_RS06415 NZ_CP085478.1 Protein Homology CDS 1307623 1307910 . + 0 ID=cds-WP_002913719.1;Parent=gene-LI478_RS06415;Dbxref=Genbank:WP_002913719.1;Name=WP_002913719.1;gbkey=CDS;gene=eutN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228160.1;locus_tag=LI478_RS06415;product=ethanolamine utilization microcompartment protein EutN;protein_id=WP_002913719.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1307922 1309325 . + . ID=gene-LI478_RS06420;Name=LI478_RS06420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS06420 NZ_CP085478.1 Protein Homology CDS 1307922 1309325 . + 0 ID=cds-WP_004152003.1;Parent=gene-LI478_RS06420;Dbxref=Genbank:WP_004152003.1;Name=WP_004152003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228159.1;locus_tag=LI478_RS06420;product=aldehyde dehydrogenase EutE;protein_id=WP_004152003.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1309335 1310174 . + . ID=gene-LI478_RS06425;Name=eutJ;gbkey=Gene;gene=eutJ;gene_biotype=protein_coding;locus_tag=LI478_RS06425 NZ_CP085478.1 Protein Homology CDS 1309335 1310174 . + 0 ID=cds-WP_064153615.1;Parent=gene-LI478_RS06425;Dbxref=Genbank:WP_064153615.1;Name=WP_064153615.1;Ontology_term=GO:0051301,GO:0005515;gbkey=CDS;gene=eutJ;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228158.1;locus_tag=LI478_RS06425;product=ethanolamine utilization protein EutJ;protein_id=WP_064153615.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1310164 1311351 . + . ID=gene-LI478_RS06430;Name=eutG;gbkey=Gene;gene=eutG;gene_biotype=protein_coding;locus_tag=LI478_RS06430 NZ_CP085478.1 Protein Homology CDS 1310164 1311351 . + 0 ID=cds-WP_004174897.1;Parent=gene-LI478_RS06430;Dbxref=Genbank:WP_004174897.1;Name=WP_004174897.1;Ontology_term=GO:0016491;gbkey=CDS;gene=eutG;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228157.1;locus_tag=LI478_RS06430;product=ethanolamine utilization ethanol dehydrogenase EutG;protein_id=WP_004174897.1;transl_table=11 NZ_CP085478.1 RefSeq pseudogene 1311551 1312784 . + . ID=gene-LI478_RS06435;Name=eutH;gbkey=Gene;gene=eutH;gene_biotype=pseudogene;locus_tag=LI478_RS06435;pseudo=true NZ_CP085478.1 Protein Homology CDS 1311551 1312784 . + 0 ID=cds-LI478_RS06435;Parent=gene-LI478_RS06435;Note=frameshifted;Ontology_term=GO:0034229,GO:0034228,GO:0016020;gbkey=CDS;gene=eutH;go_component=membrane|0016020||IEA;go_function=ethanolamine transmembrane transporter activity|0034228||IEA;go_process=ethanolamine transport|0034229||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228156.1;locus_tag=LI478_RS06435;product=ethanolamine utilization protein EutH;pseudo=true;transl_table=11 NZ_CP085478.1 RefSeq gene 1312781 1314184 . + . ID=gene-LI478_RS06440;Name=eutA;gbkey=Gene;gene=eutA;gene_biotype=protein_coding;locus_tag=LI478_RS06440 NZ_CP085478.1 Protein Homology CDS 1312781 1314184 . + 0 ID=cds-WP_021312790.1;Parent=gene-LI478_RS06440;Dbxref=Genbank:WP_021312790.1;Name=WP_021312790.1;gbkey=CDS;gene=eutA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228155.1;locus_tag=LI478_RS06440;product=ethanolamine ammonia-lyase reactivating factor EutA;protein_id=WP_021312790.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1314196 1315557 . + . ID=gene-LI478_RS06445;Name=eutB;gbkey=Gene;gene=eutB;gene_biotype=protein_coding;locus_tag=LI478_RS06445 NZ_CP085478.1 Protein Homology CDS 1314196 1315557 . + 0 ID=cds-WP_032438085.1;Parent=gene-LI478_RS06445;Dbxref=Genbank:WP_032438085.1;Name=WP_032438085.1;gbkey=CDS;gene=eutB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228154.1;locus_tag=LI478_RS06445;product=ethanolamine ammonia-lyase subunit alpha;protein_id=WP_032438085.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1315578 1316477 . + . ID=gene-LI478_RS06450;Name=eutC;gbkey=Gene;gene=eutC;gene_biotype=protein_coding;locus_tag=LI478_RS06450 NZ_CP085478.1 Protein Homology CDS 1315578 1316477 . + 0 ID=cds-WP_004213213.1;Parent=gene-LI478_RS06450;Dbxref=Genbank:WP_004213213.1;Name=WP_004213213.1;Ontology_term=GO:0006520,GO:0008851;gbkey=CDS;gene=eutC;go_function=ethanolamine ammonia-lyase activity|0008851||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228153.1;locus_tag=LI478_RS06450;product=ethanolamine ammonia-lyase subunit EutC;protein_id=WP_004213213.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1316487 1317146 . + . ID=gene-LI478_RS06455;Name=eutL;gbkey=Gene;gene=eutL;gene_biotype=protein_coding;locus_tag=LI478_RS06455 NZ_CP085478.1 Protein Homology CDS 1316487 1317146 . + 0 ID=cds-WP_004174905.1;Parent=gene-LI478_RS06455;Dbxref=Genbank:WP_004174905.1;Name=WP_004174905.1;Ontology_term=GO:0005198,GO:0031469;gbkey=CDS;gene=eutL;go_component=bacterial microcompartment|0031469||IEA;go_function=structural molecule activity|0005198||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461391.1;locus_tag=LI478_RS06455;product=ethanolamine utilization microcompartment protein EutL;protein_id=WP_004174905.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1317158 1317643 . + . ID=gene-LI478_RS06460;Name=eutK;gbkey=Gene;gene=eutK;gene_biotype=protein_coding;locus_tag=LI478_RS06460 NZ_CP085478.1 Protein Homology CDS 1317158 1317643 . + 0 ID=cds-WP_004151997.1;Parent=gene-LI478_RS06460;Dbxref=Genbank:WP_004151997.1;Name=WP_004151997.1;gbkey=CDS;gene=eutK;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228151.1;locus_tag=LI478_RS06460;product=ethanolamine utilization microcompartment protein EutK;protein_id=WP_004151997.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1317689 1318741 . + . ID=gene-LI478_RS06465;Name=eutR;gbkey=Gene;gene=eutR;gene_biotype=protein_coding;locus_tag=LI478_RS06465 NZ_CP085478.1 Protein Homology CDS 1317689 1318741 . + 0 ID=cds-WP_002913642.1;Parent=gene-LI478_RS06465;Dbxref=Genbank:WP_002913642.1;Name=WP_002913642.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=eutR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002913642.1;locus_tag=LI478_RS06465;product=HTH-type transcriptional regulator EutR;protein_id=WP_002913642.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1318785 1319684 . - . ID=gene-LI478_RS06470;Name=hemF;gbkey=Gene;gene=hemF;gene_biotype=protein_coding;locus_tag=LI478_RS06470 NZ_CP085478.1 Protein Homology CDS 1318785 1319684 . - 0 ID=cds-WP_002913641.1;Parent=gene-LI478_RS06470;Dbxref=Genbank:WP_002913641.1;Name=WP_002913641.1;Ontology_term=GO:0006779,GO:0004109;gbkey=CDS;gene=hemF;go_function=coproporphyrinogen oxidase activity|0004109||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228149.1;locus_tag=LI478_RS06470;product=oxygen-dependent coproporphyrinogen oxidase;protein_id=WP_002913641.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1319684 1320556 . - . ID=gene-LI478_RS06475;Name=amiA;gbkey=Gene;gene=amiA;gene_biotype=protein_coding;locus_tag=LI478_RS06475 NZ_CP085478.1 Protein Homology CDS 1319684 1320556 . - 0 ID=cds-WP_002913639.1;Parent=gene-LI478_RS06475;Dbxref=Genbank:WP_002913639.1;Name=WP_002913639.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=amiA;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228148.1;locus_tag=LI478_RS06475;product=N-acetylmuramoyl-L-alanine amidase AmiA;protein_id=WP_002913639.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1320768 1321193 . + . ID=gene-LI478_RS06480;Name=LI478_RS06480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS06480 NZ_CP085478.1 Protein Homology CDS 1320768 1321193 . + 0 ID=cds-WP_002913637.1;Parent=gene-LI478_RS06480;Dbxref=Genbank:WP_002913637.1;Name=WP_002913637.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228147.1;locus_tag=LI478_RS06480;product=GNAT family acetyltransferase;protein_id=WP_002913637.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1321180 1321629 . + . ID=gene-LI478_RS06485;Name=LI478_RS06485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS06485 NZ_CP085478.1 Protein Homology CDS 1321180 1321629 . + 0 ID=cds-WP_002913635.1;Parent=gene-LI478_RS06485;Dbxref=Genbank:WP_002913635.1;Name=WP_002913635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228146.1;locus_tag=LI478_RS06485;product=DUF2919 domain-containing protein;protein_id=WP_002913635.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1321691 1322266 . + . ID=gene-LI478_RS06490;Name=LI478_RS06490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS06490 NZ_CP085478.1 Protein Homology CDS 1321691 1322266 . + 0 ID=cds-WP_002913630.1;Parent=gene-LI478_RS06490;Dbxref=Genbank:WP_002913630.1;Name=WP_002913630.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228145.1;locus_tag=LI478_RS06490;product=RpoE-regulated lipoprotein;protein_id=WP_002913630.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1322361 1323260 . + . ID=gene-LI478_RS06495;Name=LI478_RS06495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS06495 NZ_CP085478.1 Protein Homology CDS 1322361 1323260 . + 0 ID=cds-WP_004145614.1;Parent=gene-LI478_RS06495;Dbxref=Genbank:WP_004145614.1;Name=WP_004145614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228144.1;locus_tag=LI478_RS06495;product=Dyp-type peroxidase;protein_id=WP_004145614.1;transl_table=11 NZ_CP085478.1 RefSeq pseudogene 1323356 1323699 . - . ID=gene-LI478_RS06500;Name=LI478_RS06500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS06500;pseudo=true NZ_CP085478.1 Protein Homology CDS 1323356 1323699 . - 0 ID=cds-LI478_RS06500;Parent=gene-LI478_RS06500;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004201988.1;locus_tag=LI478_RS06500;product=DUF559 domain-containing protein;pseudo=true;transl_table=11 NZ_CP085478.1 RefSeq gene 1323900 1324916 . + . ID=gene-LI478_RS06505;Name=cysP;gbkey=Gene;gene=cysP;gene_biotype=protein_coding;locus_tag=LI478_RS06505 NZ_CP085478.1 Protein Homology CDS 1323900 1324916 . + 0 ID=cds-WP_002913628.1;Parent=gene-LI478_RS06505;Dbxref=Genbank:WP_002913628.1;Name=WP_002913628.1;gbkey=CDS;gene=cysP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228141.1;locus_tag=LI478_RS06505;product=thiosulfate/sulfate ABC transporter substrate-binding protein CysP;protein_id=WP_002913628.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1324916 1325749 . + . ID=gene-LI478_RS06510;Name=cysT;gbkey=Gene;gene=cysT;gene_biotype=protein_coding;locus_tag=LI478_RS06510 NZ_CP085478.1 Protein Homology CDS 1324916 1325749 . + 0 ID=cds-WP_002913626.1;Parent=gene-LI478_RS06510;Dbxref=Genbank:WP_002913626.1;Name=WP_002913626.1;Ontology_term=GO:0008272,GO:0055085,GO:0015419,GO:0016020;gbkey=CDS;gene=cysT;go_component=membrane|0016020||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=sulfate transport|0008272||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000458418.1;locus_tag=LI478_RS06510;product=sulfate/thiosulfate ABC transporter permease CysT;protein_id=WP_002913626.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1325749 1326624 . + . ID=gene-LI478_RS06515;Name=cysW;gbkey=Gene;gene=cysW;gene_biotype=protein_coding;locus_tag=LI478_RS06515 NZ_CP085478.1 Protein Homology CDS 1325749 1326624 . + 0 ID=cds-WP_002913625.1;Parent=gene-LI478_RS06515;Dbxref=Genbank:WP_002913625.1;Name=WP_002913625.1;Ontology_term=GO:0008272,GO:0055085,GO:0015419,GO:0016020;gbkey=CDS;gene=cysW;go_component=membrane|0016020||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=sulfate transport|0008272||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228139.1;locus_tag=LI478_RS06515;product=sulfate/thiosulfate ABC transporter permease CysW;protein_id=WP_002913625.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1326614 1327708 . + . ID=gene-LI478_RS06520;Name=cysA;gbkey=Gene;gene=cysA;gene_biotype=protein_coding;locus_tag=LI478_RS06520 NZ_CP085478.1 Protein Homology CDS 1326614 1327708 . + 0 ID=cds-WP_002913623.1;Parent=gene-LI478_RS06520;Dbxref=Genbank:WP_002913623.1;Name=WP_002913623.1;Ontology_term=GO:0008272,GO:0005524,GO:0015419,GO:0016020,GO:0043190;gbkey=CDS;gene=cysA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type sulfate transporter activity|0015419||IEA;go_process=sulfate transport|0008272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228138.1;locus_tag=LI478_RS06520;product=sulfate/thiosulfate ABC transporter ATP-binding protein CysA;protein_id=WP_002913623.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1327827 1328738 . + . ID=gene-LI478_RS06525;Name=cysM;gbkey=Gene;gene=cysM;gene_biotype=protein_coding;locus_tag=LI478_RS06525 NZ_CP085478.1 Protein Homology CDS 1327827 1328738 . + 0 ID=cds-WP_004145610.1;Parent=gene-LI478_RS06525;Dbxref=Genbank:WP_004145610.1;Name=WP_004145610.1;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysM;go_function=cysteine synthase activity|0004124||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228137.1;locus_tag=LI478_RS06525;product=cysteine synthase CysM;protein_id=WP_004145610.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1328735 1329130 . - . ID=gene-LI478_RS06530;Name=LI478_RS06530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS06530 NZ_CP085478.1 Protein Homology CDS 1328735 1329130 . - 0 ID=cds-WP_004174913.1;Parent=gene-LI478_RS06530;Dbxref=Genbank:WP_004174913.1;Name=WP_004174913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228136.1;locus_tag=LI478_RS06530;product=DUF4440 domain-containing protein;protein_id=WP_004174913.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1329271 1330569 . - . ID=gene-LI478_RS06535;Name=ptsJ;gbkey=Gene;gene=ptsJ;gene_biotype=protein_coding;locus_tag=LI478_RS06535 NZ_CP085478.1 Protein Homology CDS 1329271 1330569 . - 0 ID=cds-WP_016947274.1;Parent=gene-LI478_RS06535;Dbxref=Genbank:WP_016947274.1;Name=WP_016947274.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ptsJ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228135.1;locus_tag=LI478_RS06535;product=transcriptional regulator PtsJ;protein_id=WP_016947274.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1330652 1331518 . + . ID=gene-LI478_RS06540;Name=pdxK;gbkey=Gene;gene=pdxK;gene_biotype=protein_coding;gene_synonym=thiJ;locus_tag=LI478_RS06540 NZ_CP085478.1 Protein Homology CDS 1330652 1331518 . + 0 ID=cds-WP_004174917.1;Parent=gene-LI478_RS06540;Dbxref=Genbank:WP_004174917.1;Name=WP_004174917.1;Ontology_term=GO:0009443,GO:0008478;gbkey=CDS;gene=pdxK;go_function=pyridoxal kinase activity|0008478||IEA;go_process=pyridoxal 5'-phosphate salvage|0009443||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228134.1;locus_tag=LI478_RS06540;product=pyridoxine/pyridoxal/pyridoxamine kinase;protein_id=WP_004174917.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1331515 1331754 . + . ID=gene-LI478_RS06545;Name=LI478_RS06545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS06545 NZ_CP085478.1 Protein Homology CDS 1331515 1331754 . + 0 ID=cds-WP_002913605.1;Parent=gene-LI478_RS06545;Dbxref=Genbank:WP_002913605.1;Name=WP_002913605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228133.1;locus_tag=LI478_RS06545;product=hypothetical protein;protein_id=WP_002913605.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1331795 1332304 . - . ID=gene-LI478_RS06550;Name=crr;gbkey=Gene;gene=crr;gene_biotype=protein_coding;locus_tag=LI478_RS06550 NZ_CP085478.1 Protein Homology CDS 1331795 1332304 . - 0 ID=cds-WP_000522253.1;Parent=gene-LI478_RS06550;Dbxref=Genbank:WP_000522253.1;Name=WP_000522253.1;Ontology_term=GO:0009401;gbkey=CDS;gene=crr;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015833547.1;locus_tag=LI478_RS06550;product=PTS glucose transporter subunit IIA;protein_id=WP_000522253.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1332347 1334074 . - . ID=gene-LI478_RS06555;Name=ptsI;gbkey=Gene;gene=ptsI;gene_biotype=protein_coding;locus_tag=LI478_RS06555 NZ_CP085478.1 Protein Homology CDS 1332347 1334074 . - 0 ID=cds-WP_002913506.1;Parent=gene-LI478_RS06555;Dbxref=Genbank:WP_002913506.1;Name=WP_002913506.1;gbkey=CDS;gene=ptsI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004870786.1;locus_tag=LI478_RS06555;product=phosphoenolpyruvate-protein phosphotransferase PtsI;protein_id=WP_002913506.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1334119 1334376 . - . ID=gene-LI478_RS06560;Name=ptsH;gbkey=Gene;gene=ptsH;gene_biotype=protein_coding;locus_tag=LI478_RS06560 NZ_CP085478.1 Protein Homology CDS 1334119 1334376 . - 0 ID=cds-WP_002913505.1;Parent=gene-LI478_RS06560;Dbxref=Genbank:WP_002913505.1;Name=WP_002913505.1;gbkey=CDS;gene=ptsH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003038086.1;locus_tag=LI478_RS06560;product=phosphocarrier protein Hpr;protein_id=WP_002913505.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1334757 1335728 . - . ID=gene-LI478_RS06565;Name=cysK;gbkey=Gene;gene=cysK;gene_biotype=protein_coding;locus_tag=LI478_RS06565 NZ_CP085478.1 Protein Homology CDS 1334757 1335728 . - 0 ID=cds-WP_002913498.1;Parent=gene-LI478_RS06565;Dbxref=Genbank:WP_002913498.1;Name=WP_002913498.1;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysK;go_function=cysteine synthase activity|0004124||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000034402.1;locus_tag=LI478_RS06565;product=cysteine synthase A;protein_id=WP_002913498.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1335905 1336666 . - . ID=gene-LI478_RS06570;Name=cysZ;gbkey=Gene;gene=cysZ;gene_biotype=protein_coding;locus_tag=LI478_RS06570 NZ_CP085478.1 Protein Homology CDS 1335905 1336666 . - 0 ID=cds-WP_004174922.1;Parent=gene-LI478_RS06570;Dbxref=Genbank:WP_004174922.1;Name=WP_004174922.1;Ontology_term=GO:0000103,GO:0015116,GO:0005886;gbkey=CDS;gene=cysZ;go_component=plasma membrane|0005886||IEA;go_function=sulfate transmembrane transporter activity|0015116||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228127.1;locus_tag=LI478_RS06570;product=sulfate transporter CysZ;protein_id=WP_004174922.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1336897 1337958 . + . ID=gene-LI478_RS06575;Name=zipA;gbkey=Gene;gene=zipA;gene_biotype=protein_coding;locus_tag=LI478_RS06575 NZ_CP085478.1 Protein Homology CDS 1336897 1337958 . + 0 ID=cds-WP_064153617.1;Parent=gene-LI478_RS06575;Dbxref=Genbank:WP_064153617.1;Name=WP_064153617.1;Ontology_term=GO:0000917,GO:0005515;gbkey=CDS;gene=zipA;go_function=protein binding|0005515||IEA;go_process=division septum assembly|0000917||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228125.1;locus_tag=LI478_RS06575;product=cell division protein ZipA;protein_id=WP_064153617.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1338028 1340043 . + . ID=gene-LI478_RS06580;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=LI478_RS06580 NZ_CP085478.1 Protein Homology CDS 1338028 1340043 . + 0 ID=cds-WP_004180820.1;Parent=gene-LI478_RS06580;Dbxref=Genbank:WP_004180820.1;Name=WP_004180820.1;Ontology_term=GO:0006260,GO:0006281,GO:0003677,GO:0003911;gbkey=CDS;gene=ligA;go_function=DNA binding|0003677||IEA,DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228124.1;locus_tag=LI478_RS06580;product=NAD-dependent DNA ligase LigA;protein_id=WP_004180820.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1340045 1340263 . + . ID=gene-LI478_RS06585;Name=LI478_RS06585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS06585 NZ_CP085478.1 Protein Homology CDS 1340045 1340263 . + 0 ID=cds-WP_002913440.1;Parent=gene-LI478_RS06585;Dbxref=Genbank:WP_002913440.1;Name=WP_002913440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228123.1;locus_tag=LI478_RS06585;product=DUF3820 family protein;protein_id=WP_002913440.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1340260 1341258 . - . ID=gene-LI478_RS06590;Name=LI478_RS06590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS06590 NZ_CP085478.1 Protein Homology CDS 1340260 1341258 . - 0 ID=cds-WP_064153619.1;Parent=gene-LI478_RS06590;Dbxref=Genbank:WP_064153619.1;Name=WP_064153619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228122.1;locus_tag=LI478_RS06590;product=bile acid:sodium symporter;protein_id=WP_064153619.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1341347 1342273 . + . ID=gene-LI478_RS06595;Name=LI478_RS06595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS06595 NZ_CP085478.1 Protein Homology CDS 1341347 1342273 . + 0 ID=cds-WP_002913438.1;Parent=gene-LI478_RS06595;Dbxref=Genbank:WP_002913438.1;Name=WP_002913438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228121.1;locus_tag=LI478_RS06595;product=LysR family transcriptional regulator;protein_id=WP_002913438.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1342358 1342495 . - . ID=gene-LI478_RS06600;Name=LI478_RS06600;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LI478_RS06600 NZ_CP085478.1 cmsearch ncRNA 1342358 1342495 . - . ID=rna-LI478_RS06600;Parent=gene-LI478_RS06600;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LI478_RS06600;product=RtT sRNA NZ_CP085478.1 cmsearch exon 1342358 1342495 . - . ID=exon-LI478_RS06600-1;Parent=rna-LI478_RS06600;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LI478_RS06600;product=RtT sRNA NZ_CP085478.1 RefSeq gene 1342591 1342666 . - . ID=gene-LI478_RS06605;Name=LI478_RS06605;gbkey=Gene;gene_biotype=tRNA;locus_tag=LI478_RS06605 NZ_CP085478.1 tRNAscan-SE tRNA 1342591 1342666 . - . ID=rna-LI478_RS06605;Parent=gene-LI478_RS06605;anticodon=(pos:complement(1342631..1342633));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS06605;product=tRNA-Lys NZ_CP085478.1 tRNAscan-SE exon 1342591 1342666 . - . ID=exon-LI478_RS06605-1;Parent=rna-LI478_RS06605;anticodon=(pos:complement(1342631..1342633));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS06605;product=tRNA-Lys NZ_CP085478.1 RefSeq gene 1342671 1342746 . - . ID=gene-LI478_RS06610;Name=LI478_RS06610;gbkey=Gene;gene_biotype=tRNA;locus_tag=LI478_RS06610 NZ_CP085478.1 tRNAscan-SE tRNA 1342671 1342746 . - . ID=rna-LI478_RS06610;Parent=gene-LI478_RS06610;anticodon=(pos:complement(1342711..1342713));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS06610;product=tRNA-Val NZ_CP085478.1 tRNAscan-SE exon 1342671 1342746 . - . ID=exon-LI478_RS06610-1;Parent=rna-LI478_RS06610;anticodon=(pos:complement(1342711..1342713));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS06610;product=tRNA-Val NZ_CP085478.1 RefSeq gene 1342793 1342868 . - . ID=gene-LI478_RS06615;Name=LI478_RS06615;gbkey=Gene;gene_biotype=tRNA;locus_tag=LI478_RS06615 NZ_CP085478.1 tRNAscan-SE tRNA 1342793 1342868 . - . ID=rna-LI478_RS06615;Parent=gene-LI478_RS06615;anticodon=(pos:complement(1342833..1342835));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS06615;product=tRNA-Val NZ_CP085478.1 tRNAscan-SE exon 1342793 1342868 . - . ID=exon-LI478_RS06615-1;Parent=rna-LI478_RS06615;anticodon=(pos:complement(1342833..1342835));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS06615;product=tRNA-Val NZ_CP085478.1 RefSeq gene 1342914 1342989 . - . ID=gene-LI478_RS06620;Name=LI478_RS06620;gbkey=Gene;gene_biotype=tRNA;locus_tag=LI478_RS06620 NZ_CP085478.1 tRNAscan-SE tRNA 1342914 1342989 . - . ID=rna-LI478_RS06620;Parent=gene-LI478_RS06620;anticodon=(pos:complement(1342954..1342956));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS06620;product=tRNA-Val NZ_CP085478.1 tRNAscan-SE exon 1342914 1342989 . - . ID=exon-LI478_RS06620-1;Parent=rna-LI478_RS06620;anticodon=(pos:complement(1342954..1342956));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS06620;product=tRNA-Val NZ_CP085478.1 RefSeq gene 1343249 1344667 . + . ID=gene-LI478_RS06625;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=LI478_RS06625 NZ_CP085478.1 Protein Homology CDS 1343249 1344667 . + 0 ID=cds-WP_004145598.1;Parent=gene-LI478_RS06625;Dbxref=Genbank:WP_004145598.1;Name=WP_004145598.1;Ontology_term=GO:0006424,GO:0004818,GO:0009332;gbkey=CDS;gene=gltX;go_component=glutamate-tRNA ligase complex|0009332||IEA;go_function=glutamate-tRNA ligase activity|0004818||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228120.1;locus_tag=LI478_RS06625;product=glutamate--tRNA ligase;protein_id=WP_004145598.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1344719 1345111 . - . ID=gene-LI478_RS06630;Name=LI478_RS06630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS06630 NZ_CP085478.1 Protein Homology CDS 1344719 1345111 . - 0 ID=cds-WP_002913435.1;Parent=gene-LI478_RS06630;Dbxref=Genbank:WP_002913435.1;Name=WP_002913435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228119.1;locus_tag=LI478_RS06630;product=putative DNA-binding transcriptional regulator;protein_id=WP_002913435.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1345115 1345468 . - . ID=gene-LI478_RS06635;Name=LI478_RS06635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS06635 NZ_CP085478.1 Protein Homology CDS 1345115 1345468 . - 0 ID=cds-WP_002913434.1;Parent=gene-LI478_RS06635;Dbxref=Genbank:WP_002913434.1;Name=WP_002913434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228118.1;locus_tag=LI478_RS06635;product=putative DNA-binding transcriptional regulator;protein_id=WP_002913434.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1345688 1345763 . + . ID=gene-LI478_RS06640;Name=LI478_RS06640;gbkey=Gene;gene_biotype=tRNA;locus_tag=LI478_RS06640 NZ_CP085478.1 tRNAscan-SE tRNA 1345688 1345763 . + . ID=rna-LI478_RS06640;Parent=gene-LI478_RS06640;anticodon=(pos:1345721..1345723);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS06640;product=tRNA-Ala NZ_CP085478.1 tRNAscan-SE exon 1345688 1345763 . + . ID=exon-LI478_RS06640-1;Parent=rna-LI478_RS06640;anticodon=(pos:1345721..1345723);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS06640;product=tRNA-Ala NZ_CP085478.1 RefSeq gene 1345805 1345880 . + . ID=gene-LI478_RS06645;Name=LI478_RS06645;gbkey=Gene;gene_biotype=tRNA;locus_tag=LI478_RS06645 NZ_CP085478.1 tRNAscan-SE tRNA 1345805 1345880 . + . ID=rna-LI478_RS06645;Parent=gene-LI478_RS06645;anticodon=(pos:1345838..1345840);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS06645;product=tRNA-Ala NZ_CP085478.1 tRNAscan-SE exon 1345805 1345880 . + . ID=exon-LI478_RS06645-1;Parent=rna-LI478_RS06645;anticodon=(pos:1345838..1345840);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS06645;product=tRNA-Ala NZ_CP085478.1 RefSeq gene 1346090 1348261 . + . ID=gene-LI478_RS06650;Name=LI478_RS06650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS06650 NZ_CP085478.1 Protein Homology CDS 1346090 1348261 . + 0 ID=cds-WP_032438088.1;Parent=gene-LI478_RS06650;Dbxref=Genbank:WP_032438088.1;Name=WP_032438088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228117.1;locus_tag=LI478_RS06650;product=EAL domain-containing protein;protein_id=WP_032438088.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1348310 1349512 . - . ID=gene-LI478_RS06655;Name=nupC;gbkey=Gene;gene=nupC;gene_biotype=protein_coding;locus_tag=LI478_RS06655 NZ_CP085478.1 Protein Homology CDS 1348310 1349512 . - 0 ID=cds-WP_002913423.1;Parent=gene-LI478_RS06655;Dbxref=Genbank:WP_002913423.1;Name=WP_002913423.1;gbkey=CDS;gene=nupC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228116.1;locus_tag=LI478_RS06655;product=nucleoside permease NupC;protein_id=WP_002913423.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1349859 1351100 . + . ID=gene-LI478_RS06660;Name=LI478_RS06660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS06660 NZ_CP085478.1 Protein Homology CDS 1349859 1351100 . + 0 ID=cds-WP_032415289.1;Parent=gene-LI478_RS06660;Dbxref=Genbank:WP_032415289.1;Name=WP_032415289.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004174932.1;locus_tag=LI478_RS06660;product=Nramp family divalent metal transporter;protein_id=WP_032415289.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1351158 1351517 . - . ID=gene-LI478_RS06665;Name=LI478_RS06665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS06665 NZ_CP085478.1 Protein Homology CDS 1351158 1351517 . - 0 ID=cds-WP_002913419.1;Parent=gene-LI478_RS06665;Dbxref=Genbank:WP_002913419.1;Name=WP_002913419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228114.1;locus_tag=LI478_RS06665;product=DUF2502 domain-containing protein;protein_id=WP_002913419.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1351648 1352640 . - . ID=gene-LI478_RS06670;Name=LI478_RS06670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS06670 NZ_CP085478.1 Protein Homology CDS 1351648 1352640 . - 0 ID=cds-WP_064153621.1;Parent=gene-LI478_RS06670;Dbxref=Genbank:WP_064153621.1;Name=WP_064153621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228113.1;locus_tag=LI478_RS06670;product=aldo/keto reductase;protein_id=WP_064153621.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1352821 1354482 . + . ID=gene-LI478_RS06675;Name=LI478_RS06675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS06675 NZ_CP085478.1 Protein Homology CDS 1352821 1354482 . + 0 ID=cds-WP_023280392.1;Parent=gene-LI478_RS06675;Dbxref=Genbank:WP_023280392.1;Name=WP_023280392.1;Ontology_term=GO:0030976;gbkey=CDS;go_function=thiamine pyrophosphate binding|0030976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228112.1;locus_tag=LI478_RS06675;product=thiamine pyrophosphate-binding protein;protein_id=WP_023280392.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1354479 1355711 . - . ID=gene-LI478_RS06680;Name=LI478_RS06680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS06680 NZ_CP085478.1 Protein Homology CDS 1354479 1355711 . - 0 ID=cds-WP_009309546.1;Parent=gene-LI478_RS06680;Dbxref=Genbank:WP_009309546.1;Name=WP_009309546.1;Ontology_term=GO:0005247;gbkey=CDS;go_function=voltage-gated chloride channel activity|0005247||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228111.1;locus_tag=LI478_RS06680;product=ion channel protein;protein_id=WP_009309546.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1355975 1356940 . + . ID=gene-LI478_RS06685;Name=glk;gbkey=Gene;gene=glk;gene_biotype=protein_coding;locus_tag=LI478_RS06685 NZ_CP085478.1 Protein Homology CDS 1355975 1356940 . + 0 ID=cds-WP_002913377.1;Parent=gene-LI478_RS06685;Dbxref=Genbank:WP_002913377.1;Name=WP_002913377.1;Ontology_term=GO:0006096,GO:0051156,GO:0004340,GO:0005524,GO:0005536;gbkey=CDS;gene=glk;go_function=glucokinase activity|0004340||IEA,ATP binding|0005524||IEA,glucose binding|0005536||IEA;go_process=glycolytic process|0006096||IEA,glucose 6-phosphate metabolic process|0051156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228110.1;locus_tag=LI478_RS06685;product=glucokinase;protein_id=WP_002913377.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1356994 1357731 . - . ID=gene-LI478_RS06690;Name=LI478_RS06690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS06690 NZ_CP085478.1 Protein Homology CDS 1356994 1357731 . - 0 ID=cds-WP_002913374.1;Parent=gene-LI478_RS06690;Dbxref=Genbank:WP_002913374.1;Name=WP_002913374.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311288.1;locus_tag=LI478_RS06690;product=LytTR family DNA-binding domain-containing protein;protein_id=WP_002913374.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1357743 1359440 . - . ID=gene-LI478_RS06695;Name=LI478_RS06695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS06695 NZ_CP085478.1 Protein Homology CDS 1357743 1359440 . - 0 ID=cds-WP_004149230.1;Parent=gene-LI478_RS06695;Dbxref=Genbank:WP_004149230.1;Name=WP_004149230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012540955.1;locus_tag=LI478_RS06695;product=sensor histidine kinase;protein_id=WP_004149230.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1359439 1359552 . + . ID=gene-LI478_RS06700;Name=LI478_RS06700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS06700 NZ_CP085478.1 Protein Homology CDS 1359439 1359552 . + 0 ID=cds-WP_032415287.1;Parent=gene-LI478_RS06700;Dbxref=Genbank:WP_032415287.1;Name=WP_032415287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228107.1;locus_tag=LI478_RS06700;product=hypothetical protein;protein_id=WP_032415287.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1359549 1359734 . - . ID=gene-LI478_RS06705;Name=LI478_RS06705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS06705 NZ_CP085478.1 Protein Homology CDS 1359549 1359734 . - 0 ID=cds-WP_004188912.1;Parent=gene-LI478_RS06705;Dbxref=Genbank:WP_004188912.1;Name=WP_004188912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228106.1;locus_tag=LI478_RS06705;product=phytanoyl-CoA dioxygenase;protein_id=WP_004188912.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1359823 1361037 . + . ID=gene-LI478_RS06710;Name=alaC;gbkey=Gene;gene=alaC;gene_biotype=protein_coding;locus_tag=LI478_RS06710 NZ_CP085478.1 Protein Homology CDS 1359823 1361037 . + 0 ID=cds-WP_002913372.1;Parent=gene-LI478_RS06710;Dbxref=Genbank:WP_002913372.1;Name=WP_002913372.1;Ontology_term=GO:0009058,GO:0003824,GO:0030170;gbkey=CDS;gene=alaC;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228105.1;locus_tag=LI478_RS06710;product=alanine transaminase;protein_id=WP_002913372.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1361108 1361179 . - . ID=gene-LI478_RS06715;Name=ypdK;gbkey=Gene;gene=ypdK;gene_biotype=protein_coding;locus_tag=LI478_RS06715 NZ_CP085478.1 Protein Homology CDS 1361108 1361179 . - 0 ID=cds-WP_099119320.1;Parent=gene-LI478_RS06715;Dbxref=Genbank:WP_099119320.1;Name=WP_099119320.1;gbkey=CDS;gene=ypdK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_077777854.1;locus_tag=LI478_RS06715;product=membrane protein YpdK;protein_id=WP_099119320.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1361519 1362715 . - . ID=gene-LI478_RS06720;Name=LI478_RS06720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS06720 NZ_CP085478.1 Protein Homology CDS 1361519 1362715 . - 0 ID=cds-WP_040170024.1;Parent=gene-LI478_RS06720;Dbxref=Genbank:WP_040170024.1;Name=WP_040170024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228104.1;locus_tag=LI478_RS06720;product=CynX/NimT family MFS transporter;protein_id=WP_040170024.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1362712 1363170 . - . ID=gene-LI478_RS06725;Name=LI478_RS06725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS06725 NZ_CP085478.1 Protein Homology CDS 1362712 1363170 . - 0 ID=cds-WP_032418583.1;Parent=gene-LI478_RS06725;Dbxref=Genbank:WP_032418583.1;Name=WP_032418583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228103.1;locus_tag=LI478_RS06725;product=nucleoside deaminase;protein_id=WP_032418583.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1363303 1364211 . + . ID=gene-LI478_RS06730;Name=cynR;gbkey=Gene;gene=cynR;gene_biotype=protein_coding;locus_tag=LI478_RS06730 NZ_CP085478.1 Protein Homology CDS 1363303 1364211 . + 0 ID=cds-WP_040170026.1;Parent=gene-LI478_RS06730;Dbxref=Genbank:WP_040170026.1;Name=WP_040170026.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=cynR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228102.1;locus_tag=LI478_RS06730;product=transcriptional regulator CynR;protein_id=WP_040170026.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1364221 1365102 . - . ID=gene-LI478_RS06735;Name=LI478_RS06735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS06735 NZ_CP085478.1 Protein Homology CDS 1364221 1365102 . - 0 ID=cds-WP_040166371.1;Parent=gene-LI478_RS06735;Dbxref=Genbank:WP_040166371.1;Name=WP_040166371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228101.1;locus_tag=LI478_RS06735;product=hypothetical protein;protein_id=WP_040166371.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1365470 1365952 . - . ID=gene-LI478_RS06740;Name=LI478_RS06740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS06740 NZ_CP085478.1 Protein Homology CDS 1365470 1365952 . - 0 ID=cds-WP_064153625.1;Parent=gene-LI478_RS06740;Dbxref=Genbank:WP_064153625.1;Name=WP_064153625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228100.1;locus_tag=LI478_RS06740;product=WbuC family cupin fold metalloprotein;protein_id=WP_064153625.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1366505 1366996 . + . ID=gene-LI478_RS06745;Name=tssB;gbkey=Gene;gene=tssB;gene_biotype=protein_coding;locus_tag=LI478_RS06745 NZ_CP085478.1 Protein Homology CDS 1366505 1366996 . + 0 ID=cds-WP_032434865.1;Parent=gene-LI478_RS06745;Dbxref=Genbank:WP_032434865.1;Name=WP_032434865.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssB;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226597.1;locus_tag=LI478_RS06745;product=type VI secretion system contractile sheath small subunit;protein_id=WP_032434865.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1367039 1368583 . + . ID=gene-LI478_RS06750;Name=tssC;gbkey=Gene;gene=tssC;gene_biotype=protein_coding;locus_tag=LI478_RS06750 NZ_CP085478.1 Protein Homology CDS 1367039 1368583 . + 0 ID=cds-WP_004892641.1;Parent=gene-LI478_RS06750;Dbxref=Genbank:WP_004892641.1;Name=WP_004892641.1;Ontology_term=GO:0033103,GO:0003674,GO:0033104;gbkey=CDS;gene=tssC;go_component=type VI protein secretion system complex|0033104||IEA;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226598.1;locus_tag=LI478_RS06750;product=type VI secretion system contractile sheath large subunit;protein_id=WP_004892641.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1368595 1369944 . + . ID=gene-LI478_RS06755;Name=tssK;gbkey=Gene;gene=tssK;gene_biotype=protein_coding;locus_tag=LI478_RS06755 NZ_CP085478.1 Protein Homology CDS 1368595 1369944 . + 0 ID=cds-WP_064153743.1;Parent=gene-LI478_RS06755;Dbxref=Genbank:WP_064153743.1;Name=WP_064153743.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssK;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004171008.1;locus_tag=LI478_RS06755;product=type VI secretion system baseplate subunit TssK;protein_id=WP_064153743.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1369941 1370630 . + . ID=gene-LI478_RS06760;Name=tssL;gbkey=Gene;gene=tssL;gene_biotype=protein_coding;locus_tag=LI478_RS06760 NZ_CP085478.1 Protein Homology CDS 1369941 1370630 . + 0 ID=cds-WP_025368033.1;Parent=gene-LI478_RS06760;Dbxref=Genbank:WP_025368033.1;Name=WP_025368033.1;gbkey=CDS;gene=tssL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001536469.1;locus_tag=LI478_RS06760;product=type VI secretion system protein TssL%2C short form;protein_id=WP_025368033.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1370630 1372306 . + . ID=gene-LI478_RS06765;Name=LI478_RS06765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS06765 NZ_CP085478.1 Protein Homology CDS 1370630 1372306 . + 0 ID=cds-WP_032415285.1;Parent=gene-LI478_RS06765;Dbxref=Genbank:WP_032415285.1;Name=WP_032415285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001254769.1;locus_tag=LI478_RS06765;product=OmpA family protein;protein_id=WP_032415285.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1372309 1372800 . + . ID=gene-LI478_RS06770;Name=hcp;gbkey=Gene;gene=hcp;gene_biotype=protein_coding;locus_tag=LI478_RS06770 NZ_CP085478.1 Protein Homology CDS 1372309 1372800 . + 0 ID=cds-WP_025368035.1;Parent=gene-LI478_RS06770;Dbxref=Genbank:WP_025368035.1;Name=WP_025368035.1;gbkey=CDS;gene=hcp;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226602.1;locus_tag=LI478_RS06770;product=type VI secretion system effector Hcp;protein_id=WP_025368035.1;transl_table=11 NZ_CP085478.1 RefSeq pseudogene 1373013 1373183 . + . ID=gene-LI478_RS06775;Name=LI478_RS06775;end_range=1373183,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS06775;partial=true;pseudo=true;start_range=.,1373013 NZ_CP085478.1 Protein Homology CDS 1373013 1373183 . + 0 ID=cds-LI478_RS06775;Parent=gene-LI478_RS06775;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1373183,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015570418.1;locus_tag=LI478_RS06775;partial=true;product=type VI secretion system protein VasG;pseudo=true;start_range=.,1373013;transl_table=11 NZ_CP085478.1 RefSeq gene 1373221 1375578 . + . ID=gene-LI478_RS06780;Name=vgrG;gbkey=Gene;gene=vgrG;gene_biotype=protein_coding;locus_tag=LI478_RS06780 NZ_CP085478.1 Protein Homology CDS 1373221 1375578 . + 0 ID=cds-WP_080792318.1;Parent=gene-LI478_RS06780;Dbxref=Genbank:WP_080792318.1;Name=WP_080792318.1;gbkey=CDS;gene=vgrG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020884772.1;locus_tag=LI478_RS06780;product=type VI secretion system Vgr family protein;protein_id=WP_080792318.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1375585 1376130 . + . ID=gene-LI478_RS06785;Name=LI478_RS06785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS06785 NZ_CP085478.1 Protein Homology CDS 1375585 1376130 . + 0 ID=cds-WP_223176249.1;Parent=gene-LI478_RS06785;Dbxref=Genbank:WP_223176249.1;Name=WP_223176249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009309562.1;locus_tag=LI478_RS06785;product=DUF3828 domain-containing protein;protein_id=WP_223176249.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1376204 1376674 . + . ID=gene-LI478_RS06790;Name=LI478_RS06790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS06790 NZ_CP085478.1 Protein Homology CDS 1376204 1376674 . + 0 ID=cds-WP_064153457.1;Parent=gene-LI478_RS06790;Dbxref=Genbank:WP_064153457.1;Name=WP_064153457.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024287.2;locus_tag=LI478_RS06790;product=DUF3828 domain-containing protein;protein_id=WP_064153457.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1376675 1379614 . + . ID=gene-LI478_RS06795;Name=LI478_RS06795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS06795 NZ_CP085478.1 Protein Homology CDS 1376675 1379614 . + 0 ID=cds-WP_077258325.1;Parent=gene-LI478_RS06795;Dbxref=Genbank:WP_077258325.1;Name=WP_077258325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007667201.1;locus_tag=LI478_RS06795;product=N-acetylglucosaminidase;protein_id=WP_077258325.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1379617 1380393 . + . ID=gene-LI478_RS06800;Name=LI478_RS06800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS06800 NZ_CP085478.1 GeneMarkS-2+ CDS 1379617 1380393 . + 0 ID=cds-WP_064153455.1;Parent=gene-LI478_RS06800;Dbxref=Genbank:WP_064153455.1;Name=WP_064153455.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LI478_RS06800;product=hypothetical protein;protein_id=WP_064153455.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1380421 1380684 . + . ID=gene-LI478_RS06805;Name=LI478_RS06805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS06805 NZ_CP085478.1 Protein Homology CDS 1380421 1380684 . + 0 ID=cds-WP_048269353.1;Parent=gene-LI478_RS06805;Dbxref=Genbank:WP_048269353.1;Name=WP_048269353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020884766.1;locus_tag=LI478_RS06805;product=PAAR domain-containing protein;protein_id=WP_048269353.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1380687 1381895 . + . ID=gene-LI478_RS06810;Name=LI478_RS06810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS06810 NZ_CP085478.1 Protein Homology CDS 1380687 1381895 . + 0 ID=cds-WP_048269352.1;Parent=gene-LI478_RS06810;Dbxref=Genbank:WP_048269352.1;Name=WP_048269352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004170999.1;locus_tag=LI478_RS06810;product=membrane protein;protein_id=WP_048269352.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1381888 1385259 . + . ID=gene-LI478_RS06815;Name=LI478_RS06815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS06815 NZ_CP085478.1 Protein Homology CDS 1381888 1385259 . + 0 ID=cds-WP_048269351.1;Parent=gene-LI478_RS06815;Dbxref=Genbank:WP_048269351.1;Name=WP_048269351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001151318.1;locus_tag=LI478_RS06815;product=type VI secretion protein VasK;protein_id=WP_048269351.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1385806 1386990 . + . ID=gene-LI478_RS06820;Name=LI478_RS06820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS06820 NZ_CP085478.1 Protein Homology CDS 1385806 1386990 . + 0 ID=cds-WP_064153453.1;Parent=gene-LI478_RS06820;Dbxref=Genbank:WP_064153453.1;Name=WP_064153453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000679281.1;locus_tag=LI478_RS06820;product=tetratricopeptide repeat protein;protein_id=WP_064153453.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1386991 1387923 . + . ID=gene-LI478_RS06825;Name=LI478_RS06825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS06825 NZ_CP085478.1 GeneMarkS-2+ CDS 1386991 1387923 . + 0 ID=cds-WP_129718277.1;Parent=gene-LI478_RS06825;Dbxref=Genbank:WP_129718277.1;Name=WP_129718277.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LI478_RS06825;product=PASTA domain-containing protein;protein_id=WP_129718277.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1387971 1389578 . + . ID=gene-LI478_RS06830;Name=tssA;gbkey=Gene;gene=tssA;gene_biotype=protein_coding;locus_tag=LI478_RS06830 NZ_CP085478.1 Protein Homology CDS 1387971 1389578 . + 0 ID=cds-WP_064153452.1;Parent=gene-LI478_RS06830;Dbxref=Genbank:WP_064153452.1;Name=WP_064153452.1;gbkey=CDS;gene=tssA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211937.1;locus_tag=LI478_RS06830;product=type VI secretion system protein TssA;protein_id=WP_064153452.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1389612 1391381 . + . ID=gene-LI478_RS06835;Name=tssF;gbkey=Gene;gene=tssF;gene_biotype=protein_coding;locus_tag=LI478_RS06835 NZ_CP085478.1 Protein Homology CDS 1389612 1391381 . + 0 ID=cds-WP_064153451.1;Parent=gene-LI478_RS06835;Dbxref=Genbank:WP_064153451.1;Name=WP_064153451.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssF;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009309580.1;locus_tag=LI478_RS06835;product=type VI secretion system baseplate subunit TssF;protein_id=WP_064153451.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1391345 1392427 . + . ID=gene-LI478_RS06840;Name=tssG;gbkey=Gene;gene=tssG;gene_biotype=protein_coding;locus_tag=LI478_RS06840 NZ_CP085478.1 Protein Homology CDS 1391345 1392427 . + 0 ID=cds-WP_064153450.1;Parent=gene-LI478_RS06840;Dbxref=Genbank:WP_064153450.1;Name=WP_064153450.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssG;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001601257.1;locus_tag=LI478_RS06840;product=type VI secretion system baseplate subunit TssG;protein_id=WP_064153450.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1392461 1392985 . + . ID=gene-LI478_RS06845;Name=tssJ;gbkey=Gene;gene=tssJ;gene_biotype=protein_coding;locus_tag=LI478_RS06845 NZ_CP085478.1 Protein Homology CDS 1392461 1392985 . + 0 ID=cds-WP_009309582.1;Parent=gene-LI478_RS06845;Dbxref=Genbank:WP_009309582.1;Name=WP_009309582.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssJ;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004163322.1;locus_tag=LI478_RS06845;product=type VI secretion system lipoprotein TssJ;protein_id=WP_009309582.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1392990 1395305 . + . ID=gene-LI478_RS06850;Name=vgrG;gbkey=Gene;gene=vgrG;gene_biotype=protein_coding;locus_tag=LI478_RS06850 NZ_CP085478.1 Protein Homology CDS 1392990 1395305 . + 0 ID=cds-WP_102007273.1;Parent=gene-LI478_RS06850;Dbxref=Genbank:WP_102007273.1;Name=WP_102007273.1;gbkey=CDS;gene=vgrG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004160259.1;locus_tag=LI478_RS06850;product=type VI secretion system Vgr family protein;protein_id=WP_102007273.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1395307 1395861 . + . ID=gene-LI478_RS06855;Name=LI478_RS06855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS06855 NZ_CP085478.1 Protein Homology CDS 1395307 1395861 . + 0 ID=cds-WP_053067564.1;Parent=gene-LI478_RS06855;Dbxref=Genbank:WP_053067564.1;Name=WP_053067564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004173374.1;locus_tag=LI478_RS06855;product=DUF4123 domain-containing protein;protein_id=WP_053067564.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1395861 1397180 . + . ID=gene-LI478_RS06860;Name=LI478_RS06860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS06860 NZ_CP085478.1 Protein Homology CDS 1395861 1397180 . + 0 ID=cds-WP_223371738.1;Parent=gene-LI478_RS06860;Dbxref=Genbank:WP_223371738.1;Name=WP_223371738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004164823.1;locus_tag=LI478_RS06860;product=hypothetical protein;protein_id=WP_223371738.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1397249 1397794 . + . ID=gene-LI478_RS06865;Name=LI478_RS06865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS06865 NZ_CP085478.1 Protein Homology CDS 1397249 1397794 . + 0 ID=cds-WP_048269696.1;Parent=gene-LI478_RS06865;Dbxref=Genbank:WP_048269696.1;Name=WP_048269696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004164822.1;locus_tag=LI478_RS06865;product=hypothetical protein;protein_id=WP_048269696.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1397835 1398578 . + . ID=gene-LI478_RS06870;Name=LI478_RS06870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS06870 NZ_CP085478.1 Protein Homology CDS 1397835 1398578 . + 0 ID=cds-WP_227394176.1;Parent=gene-LI478_RS06870;Dbxref=Genbank:WP_227394176.1;Name=WP_227394176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004160252.1;locus_tag=LI478_RS06870;product=hypothetical protein;protein_id=WP_227394176.1;transl_table=11 NZ_CP085478.1 RefSeq pseudogene 1398606 1399001 . + . ID=gene-LI478_RS26440;Name=tssJ;end_range=1399001,.;gbkey=Gene;gene=tssJ;gene_biotype=pseudogene;locus_tag=LI478_RS26440;partial=true;pseudo=true NZ_CP085478.1 Protein Homology CDS 1398606 1399001 . + 0 ID=cds-LI478_RS26440;Parent=gene-LI478_RS26440;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0033103,GO:0003674;end_range=1399001,.;gbkey=CDS;gene=tssJ;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004387329.1;locus_tag=LI478_RS26440;partial=true;product=type VI secretion system lipoprotein TssJ;pseudo=true;transl_table=11 NZ_CP085478.1 RefSeq pseudogene 1398990 1399358 . + . ID=gene-LI478_RS26445;Name=LI478_RS26445;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS26445;partial=true;pseudo=true;start_range=.,1398990 NZ_CP085478.1 Protein Homology CDS 1398990 1399358 . + 0 ID=cds-LI478_RS26445;Parent=gene-LI478_RS26445;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004160259.1;locus_tag=LI478_RS26445;partial=true;product=DUF2345 domain-containing protein;pseudo=true;start_range=.,1398990;transl_table=11 NZ_CP085478.1 RefSeq gene 1399355 1399858 . + . ID=gene-LI478_RS06880;Name=LI478_RS06880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS06880 NZ_CP085478.1 Protein Homology CDS 1399355 1399858 . + 0 ID=cds-WP_023317121.1;Parent=gene-LI478_RS06880;Dbxref=Genbank:WP_023317121.1;Name=WP_023317121.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024894.2;locus_tag=LI478_RS06880;product=DUF4123 domain-containing protein;protein_id=WP_023317121.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1399852 1400196 . + . ID=gene-LI478_RS06885;Name=LI478_RS06885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS06885 NZ_CP085478.1 GeneMarkS-2+ CDS 1399852 1400196 . + 0 ID=cds-WP_023317120.1;Parent=gene-LI478_RS06885;Dbxref=Genbank:WP_023317120.1;Name=WP_023317120.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LI478_RS06885;product=hypothetical protein;protein_id=WP_023317120.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1400196 1400966 . + . ID=gene-LI478_RS06890;Name=LI478_RS06890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS06890 NZ_CP085478.1 Protein Homology CDS 1400196 1400966 . + 0 ID=cds-WP_032418605.1;Parent=gene-LI478_RS06890;Dbxref=Genbank:WP_032418605.1;Name=WP_032418605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001563656.1;locus_tag=LI478_RS06890;product=Tox-REase-5 domain-containing protein;protein_id=WP_032418605.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1400969 1401691 . + . ID=gene-LI478_RS06895;Name=LI478_RS06895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS06895 NZ_CP085478.1 Protein Homology CDS 1400969 1401691 . + 0 ID=cds-WP_048984536.1;Parent=gene-LI478_RS06895;Dbxref=Genbank:WP_048984536.1;Name=WP_048984536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012124932.1;locus_tag=LI478_RS06895;product=Imm52 family immunity protein;protein_id=WP_048984536.1;transl_table=11 NZ_CP085478.1 RefSeq pseudogene 1401705 1403575 . + . ID=gene-LI478_RS06900;Name=vgrG;gbkey=Gene;gene=vgrG;gene_biotype=pseudogene;locus_tag=LI478_RS06900;partial=true;pseudo=true;start_range=.,1401705 NZ_CP085478.1 Protein Homology CDS 1401705 1403575 . + 0 ID=cds-LI478_RS06900;Parent=gene-LI478_RS06900;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;gene=vgrG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000371009.1;locus_tag=LI478_RS06900;partial=true;product=type VI secretion system tip protein VgrG;pseudo=true;start_range=.,1401705;transl_table=11 NZ_CP085478.1 RefSeq gene 1403576 1403761 . + . ID=gene-LI478_RS06905;Name=LI478_RS06905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS06905 NZ_CP085478.1 GeneMarkS-2+ CDS 1403576 1403761 . + 0 ID=cds-WP_179193485.1;Parent=gene-LI478_RS06905;Dbxref=Genbank:WP_179193485.1;Name=WP_179193485.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LI478_RS06905;product=hypothetical protein;protein_id=WP_179193485.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1403768 1404460 . + . ID=gene-LI478_RS06910;Name=LI478_RS06910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS06910 NZ_CP085478.1 GeneMarkS-2+ CDS 1403768 1404460 . + 0 ID=cds-WP_223175365.1;Parent=gene-LI478_RS06910;Dbxref=Genbank:WP_223175365.1;Name=WP_223175365.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LI478_RS06910;product=glycine zipper family protein;protein_id=WP_223175365.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1404517 1405002 . + . ID=gene-LI478_RS06915;Name=LI478_RS06915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS06915 NZ_CP085478.1 GeneMarkS-2+ CDS 1404517 1405002 . + 0 ID=cds-WP_048985678.1;Parent=gene-LI478_RS06915;Dbxref=Genbank:WP_048985678.1;Name=WP_048985678.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LI478_RS06915;product=hypothetical protein;protein_id=WP_048985678.1;transl_table=11 NZ_CP085478.1 RefSeq pseudogene 1405078 1405206 . + . ID=gene-LI478_RS06920;Name=LI478_RS06920;end_range=1405206,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS06920;partial=true;pseudo=true NZ_CP085478.1 Protein Homology CDS 1405078 1405206 . + 0 ID=cds-LI478_RS06920;Parent=gene-LI478_RS06920;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1405206,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004163322.1;locus_tag=LI478_RS06920;partial=true;product=type VI secretion system lipoprotein TssJ;pseudo=true;transl_table=11 NZ_CP085478.1 RefSeq gene 1405510 1405908 . + . ID=gene-LI478_RS06925;Name=LI478_RS06925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS06925 NZ_CP085478.1 Protein Homology CDS 1405510 1405908 . + 0 ID=cds-WP_071838925.1;Parent=gene-LI478_RS06925;Dbxref=Genbank:WP_071838925.1;Name=WP_071838925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000719969.1;locus_tag=LI478_RS06925;product=hypothetical protein;protein_id=WP_071838925.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1406697 1407146 . + . ID=gene-LI478_RS06930;Name=LI478_RS06930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS06930 NZ_CP085478.1 GeneMarkS-2+ CDS 1406697 1407146 . + 0 ID=cds-WP_129718279.1;Parent=gene-LI478_RS06930;Dbxref=Genbank:WP_129718279.1;Name=WP_129718279.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LI478_RS06930;product=hypothetical protein;protein_id=WP_129718279.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1407143 1407676 . + . ID=gene-LI478_RS06935;Name=LI478_RS06935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS06935 NZ_CP085478.1 GeneMarkS-2+ CDS 1407143 1407676 . + 0 ID=cds-WP_048985683.1;Parent=gene-LI478_RS06935;Dbxref=Genbank:WP_048985683.1;Name=WP_048985683.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LI478_RS06935;product=hypothetical protein;protein_id=WP_048985683.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1408553 1408627 . - . ID=gene-LI478_RS06940;Name=LI478_RS06940;gbkey=Gene;gene_biotype=tRNA;locus_tag=LI478_RS06940 NZ_CP085478.1 tRNAscan-SE tRNA 1408553 1408627 . - . ID=rna-LI478_RS06940;Parent=gene-LI478_RS06940;anticodon=(pos:complement(1408592..1408594));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS06940;product=tRNA-Arg NZ_CP085478.1 tRNAscan-SE exon 1408553 1408627 . - . ID=exon-LI478_RS06940-1;Parent=rna-LI478_RS06940;anticodon=(pos:complement(1408592..1408594));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS06940;product=tRNA-Arg NZ_CP085478.1 RefSeq gene 1408717 1409646 . - . ID=gene-LI478_RS06945;Name=LI478_RS06945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS06945 NZ_CP085478.1 Protein Homology CDS 1408717 1409646 . - 0 ID=cds-WP_004149224.1;Parent=gene-LI478_RS06945;Dbxref=Genbank:WP_004149224.1;Name=WP_004149224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004201800.1;locus_tag=LI478_RS06945;product=formate/nitrite transporter family protein;protein_id=WP_004149224.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1409936 1410697 . + . ID=gene-LI478_RS06950;Name=mlaA;gbkey=Gene;gene=mlaA;gene_biotype=protein_coding;locus_tag=LI478_RS06950 NZ_CP085478.1 Protein Homology CDS 1409936 1410697 . + 0 ID=cds-WP_002913362.1;Parent=gene-LI478_RS06950;Dbxref=Genbank:WP_002913362.1;Name=WP_002913362.1;Ontology_term=GO:0016020;gbkey=CDS;gene=mlaA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228097.1;locus_tag=LI478_RS06950;product=phospholipid-binding lipoprotein MlaA;protein_id=WP_002913362.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1410759 1412081 . - . ID=gene-LI478_RS06955;Name=fadL;gbkey=Gene;gene=fadL;gene_biotype=protein_coding;locus_tag=LI478_RS06955 NZ_CP085478.1 Protein Homology CDS 1410759 1412081 . - 0 ID=cds-WP_002913360.1;Parent=gene-LI478_RS06955;Dbxref=Genbank:WP_002913360.1;Name=WP_002913360.1;gbkey=CDS;gene=fadL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001766332.1;locus_tag=LI478_RS06955;product=long-chain fatty acid transporter FadL;protein_id=WP_002913360.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1412455 1412739 . + . ID=gene-LI478_RS06960;Name=LI478_RS06960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS06960 NZ_CP085478.1 Protein Homology CDS 1412455 1412739 . + 0 ID=cds-WP_002913359.1;Parent=gene-LI478_RS06960;Dbxref=Genbank:WP_002913359.1;Name=WP_002913359.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228094.1;locus_tag=LI478_RS06960;product=YfcZ/YiiS family protein;protein_id=WP_002913359.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1412899 1414209 . + . ID=gene-LI478_RS06965;Name=fadI;gbkey=Gene;gene=fadI;gene_biotype=protein_coding;locus_tag=LI478_RS06965 NZ_CP085478.1 Protein Homology CDS 1412899 1414209 . + 0 ID=cds-WP_002913358.1;Parent=gene-LI478_RS06965;Dbxref=Genbank:WP_002913358.1;Name=WP_002913358.1;Ontology_term=GO:0009062,GO:0003988;gbkey=CDS;gene=fadI;go_function=acetyl-CoA C-acyltransferase activity|0003988||IEA;go_process=fatty acid catabolic process|0009062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228093.1;locus_tag=LI478_RS06965;product=acetyl-CoA C-acyltransferase FadI;protein_id=WP_002913358.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1414209 1416353 . + . ID=gene-LI478_RS06970;Name=fadJ;gbkey=Gene;gene=fadJ;gene_biotype=protein_coding;locus_tag=LI478_RS06970 NZ_CP085478.1 Protein Homology CDS 1414209 1416353 . + 0 ID=cds-WP_004174952.1;Parent=gene-LI478_RS06970;Dbxref=Genbank:WP_004174952.1;Name=WP_004174952.1;Ontology_term=GO:0006635,GO:0003857,GO:0008692,GO:0016491,GO:0051287;gbkey=CDS;gene=fadJ;go_function=3-hydroxyacyl-CoA dehydrogenase activity|0003857||IEA,3-hydroxybutyryl-CoA epimerase activity|0008692||IEA,oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;go_process=fatty acid beta-oxidation|0006635||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228092.1;locus_tag=LI478_RS06970;product=fatty acid oxidation complex subunit alpha FadJ;protein_id=WP_004174952.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1416563 1417048 . + . ID=gene-LI478_RS06975;Name=sixA;gbkey=Gene;gene=sixA;gene_biotype=protein_coding;locus_tag=LI478_RS06975 NZ_CP085478.1 Protein Homology CDS 1416563 1417048 . + 0 ID=cds-WP_002913355.1;Parent=gene-LI478_RS06975;Dbxref=Genbank:WP_002913355.1;Name=WP_002913355.1;Ontology_term=GO:0000160,GO:0101006;gbkey=CDS;gene=sixA;go_function=protein histidine phosphatase activity|0101006||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461329.1;locus_tag=LI478_RS06975;product=phosphohistidine phosphatase SixA;protein_id=WP_002913355.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1417069 1417620 . - . ID=gene-LI478_RS06980;Name=smrB;gbkey=Gene;gene=smrB;gene_biotype=protein_coding;locus_tag=LI478_RS06980 NZ_CP085478.1 Protein Homology CDS 1417069 1417620 . - 0 ID=cds-WP_002913348.1;Parent=gene-LI478_RS06980;Dbxref=Genbank:WP_002913348.1;Name=WP_002913348.1;gbkey=CDS;gene=smrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017899504.1;locus_tag=LI478_RS06980;product=endonuclease SmrB;protein_id=WP_002913348.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1417788 1418720 . + . ID=gene-LI478_RS06985;Name=prmB;gbkey=Gene;gene=prmB;gene_biotype=protein_coding;locus_tag=LI478_RS06985 NZ_CP085478.1 Protein Homology CDS 1417788 1418720 . + 0 ID=cds-WP_002913346.1;Parent=gene-LI478_RS06985;Dbxref=Genbank:WP_002913346.1;Name=WP_002913346.1;Ontology_term=GO:0018364,GO:0042273,GO:0008276,GO:0008757;gbkey=CDS;gene=prmB;go_function=protein methyltransferase activity|0008276||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=peptidyl-glutamine methylation|0018364||IEA,ribosomal large subunit biogenesis|0042273||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129736.1;locus_tag=LI478_RS06985;product=50S ribosomal protein L3 N(5)-glutamine methyltransferase;protein_id=WP_002913346.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1418762 1419847 . + . ID=gene-LI478_RS06990;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;locus_tag=LI478_RS06990 NZ_CP085478.1 Protein Homology CDS 1418762 1419847 . + 0 ID=cds-WP_002913342.1;Parent=gene-LI478_RS06990;Dbxref=Genbank:WP_002913342.1;Name=WP_002913342.1;Ontology_term=GO:0009073,GO:0004107;gbkey=CDS;gene=aroC;go_function=chorismate synthase activity|0004107||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129642.1;locus_tag=LI478_RS06990;product=chorismate synthase;protein_id=WP_002913342.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1419850 1420674 . + . ID=gene-LI478_RS06995;Name=mepA;gbkey=Gene;gene=mepA;gene_biotype=protein_coding;locus_tag=LI478_RS06995 NZ_CP085478.1 Protein Homology CDS 1419850 1420674 . + 0 ID=cds-WP_004174960.1;Parent=gene-LI478_RS06995;Dbxref=Genbank:WP_004174960.1;Name=WP_004174960.1;Ontology_term=GO:0006508,GO:0004252,GO:0030288;gbkey=CDS;gene=mepA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228087.1;locus_tag=LI478_RS06995;product=penicillin-insensitive murein endopeptidase;protein_id=WP_004174960.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1420674 1421483 . + . ID=gene-LI478_RS07000;Name=LI478_RS07000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS07000 NZ_CP085478.1 Protein Homology CDS 1420674 1421483 . + 0 ID=cds-WP_002913340.1;Parent=gene-LI478_RS07000;Dbxref=Genbank:WP_002913340.1;Name=WP_002913340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228086.1;locus_tag=LI478_RS07000;product=sulfite exporter TauE/SafE family protein;protein_id=WP_002913340.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1421483 1422031 . + . ID=gene-LI478_RS07005;Name=LI478_RS07005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS07005 NZ_CP085478.1 Protein Homology CDS 1421483 1422031 . + 0 ID=cds-WP_064153444.1;Parent=gene-LI478_RS07005;Dbxref=Genbank:WP_064153444.1;Name=WP_064153444.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228085.1;locus_tag=LI478_RS07005;product=elongation factor P hydroxylase;protein_id=WP_064153444.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1422063 1422344 . + . ID=gene-LI478_RS07010;Name=LI478_RS07010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS07010 NZ_CP085478.1 Protein Homology CDS 1422063 1422344 . + 0 ID=cds-WP_002913338.1;Parent=gene-LI478_RS07010;Dbxref=Genbank:WP_002913338.1;Name=WP_002913338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228084.1;locus_tag=LI478_RS07010;product=YfcL family protein;protein_id=WP_002913338.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1422406 1424394 . - . ID=gene-LI478_RS07015;Name=mnmC;gbkey=Gene;gene=mnmC;gene_biotype=protein_coding;locus_tag=LI478_RS07015 NZ_CP085478.1 Protein Homology CDS 1422406 1424394 . - 0 ID=cds-WP_032438778.1;Parent=gene-LI478_RS07015;Dbxref=Genbank:WP_032438778.1;Name=WP_032438778.1;Ontology_term=GO:0008033,GO:0004808,GO:0016491;gbkey=CDS;gene=mnmC;go_function=tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity|0004808||IEA,oxidoreductase activity|0016491||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228083.1;locus_tag=LI478_RS07015;product=bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC;protein_id=WP_032438778.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1424553 1425773 . + . ID=gene-LI478_RS07020;Name=fabB;gbkey=Gene;gene=fabB;gene_biotype=protein_coding;locus_tag=LI478_RS07020 NZ_CP085478.1 Protein Homology CDS 1424553 1425773 . + 0 ID=cds-WP_002913291.1;Parent=gene-LI478_RS07020;Dbxref=Genbank:WP_002913291.1;Name=WP_002913291.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabB;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228082.1;locus_tag=LI478_RS07020;product=beta-ketoacyl-ACP synthase I;protein_id=WP_002913291.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1425983 1427158 . + . ID=gene-LI478_RS07025;Name=LI478_RS07025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS07025 NZ_CP085478.1 Protein Homology CDS 1425983 1427158 . + 0 ID=cds-WP_004149211.1;Parent=gene-LI478_RS07025;Dbxref=Genbank:WP_004149211.1;Name=WP_004149211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228081.1;locus_tag=LI478_RS07025;product=MFS transporter;protein_id=WP_004149211.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1427245 1428222 . - . ID=gene-LI478_RS07030;Name=flk;gbkey=Gene;gene=flk;gene_biotype=protein_coding;locus_tag=LI478_RS07030 NZ_CP085478.1 Protein Homology CDS 1427245 1428222 . - 0 ID=cds-WP_064153441.1;Parent=gene-LI478_RS07030;Dbxref=Genbank:WP_064153441.1;Name=WP_064153441.1;Ontology_term=GO:0010468,GO:0016020;gbkey=CDS;gene=flk;go_component=membrane|0016020||IEA;go_process=regulation of gene expression|0010468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004149210.1;locus_tag=LI478_RS07030;product=flagella biosynthesis regulator Flk;protein_id=WP_064153441.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1428333 1429469 . + . ID=gene-LI478_RS07035;Name=pdxB;gbkey=Gene;gene=pdxB;gene_biotype=protein_coding;locus_tag=LI478_RS07035 NZ_CP085478.1 Protein Homology CDS 1428333 1429469 . + 0 ID=cds-WP_032415276.1;Parent=gene-LI478_RS07035;Dbxref=Genbank:WP_032415276.1;Name=WP_032415276.1;Ontology_term=GO:0008615,GO:0033711,GO:0046983,GO:0051287;gbkey=CDS;gene=pdxB;go_function=4-phosphoerythronate dehydrogenase activity|0033711||IEA,protein dimerization activity|0046983||IEA,NAD binding|0051287||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228079.1;locus_tag=LI478_RS07035;product=4-phosphoerythronate dehydrogenase PdxB;protein_id=WP_032415276.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1429533 1430546 . + . ID=gene-LI478_RS07040;Name=LI478_RS07040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS07040 NZ_CP085478.1 Protein Homology CDS 1429533 1430546 . + 0 ID=cds-WP_002913227.1;Parent=gene-LI478_RS07040;Dbxref=Genbank:WP_002913227.1;Name=WP_002913227.1;Ontology_term=GO:0008652,GO:0016620,GO:0046983,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,protein dimerization activity|0046983||IEA,NAD binding|0051287||IEA;go_process=amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228078.1;locus_tag=LI478_RS07040;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_002913227.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1430546 1431358 . + . ID=gene-LI478_RS07045;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;locus_tag=LI478_RS07045 NZ_CP085478.1 Protein Homology CDS 1430546 1431358 . + 0 ID=cds-WP_002913226.1;Parent=gene-LI478_RS07045;Dbxref=Genbank:WP_002913226.1;Name=WP_002913226.1;Ontology_term=GO:0006400,GO:0009982;gbkey=CDS;gene=truA;go_function=pseudouridine synthase activity|0009982||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228077.1;locus_tag=LI478_RS07045;product=tRNA pseudouridine(38-40) synthase TruA;protein_id=WP_002913226.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1431385 1432044 . + . ID=gene-LI478_RS07050;Name=LI478_RS07050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS07050 NZ_CP085478.1 Protein Homology CDS 1431385 1432044 . + 0 ID=cds-WP_002913221.1;Parent=gene-LI478_RS07050;Dbxref=Genbank:WP_002913221.1;Name=WP_002913221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228076.1;locus_tag=LI478_RS07050;product=DedA family protein;protein_id=WP_002913221.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1432230 1433150 . + . ID=gene-LI478_RS07055;Name=accD;gbkey=Gene;gene=accD;gene_biotype=protein_coding;locus_tag=LI478_RS07055 NZ_CP085478.1 Protein Homology CDS 1432230 1433150 . + 0 ID=cds-WP_002913220.1;Parent=gene-LI478_RS07055;Dbxref=Genbank:WP_002913220.1;Name=WP_002913220.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accD;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228075.1;locus_tag=LI478_RS07055;product=acetyl-CoA carboxylase%2C carboxyltransferase subunit beta;protein_id=WP_002913220.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1433226 1434494 . + . ID=gene-LI478_RS07060;Name=folC;gbkey=Gene;gene=folC;gene_biotype=protein_coding;locus_tag=LI478_RS07060 NZ_CP085478.1 Protein Homology CDS 1433226 1434494 . + 0 ID=cds-WP_002913219.1;Parent=gene-LI478_RS07060;Dbxref=Genbank:WP_002913219.1;Name=WP_002913219.1;Ontology_term=GO:0009396,GO:0004326,GO:0005524,GO:0016874;gbkey=CDS;gene=folC;go_function=tetrahydrofolylpolyglutamate synthase activity|0004326||IEA,ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228074.1;locus_tag=LI478_RS07060;product=bifunctional tetrahydrofolate synthase/dihydrofolate synthase;protein_id=WP_002913219.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1434484 1435173 . + . ID=gene-LI478_RS07065;Name=dedD;gbkey=Gene;gene=dedD;gene_biotype=protein_coding;locus_tag=LI478_RS07065 NZ_CP085478.1 Protein Homology CDS 1434484 1435173 . + 0 ID=cds-WP_004214089.1;Parent=gene-LI478_RS07065;Dbxref=Genbank:WP_004214089.1;Name=WP_004214089.1;Ontology_term=GO:0032506,GO:0042834,GO:0030428;gbkey=CDS;gene=dedD;go_component=cell septum|0030428||IEA;go_function=peptidoglycan binding|0042834||IEA;go_process=cytokinetic process|0032506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004151102.1;locus_tag=LI478_RS07065;product=cell division protein DedD;protein_id=WP_004214089.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1435390 1435878 . + . ID=gene-LI478_RS07070;Name=cvpA;gbkey=Gene;gene=cvpA;gene_biotype=protein_coding;locus_tag=LI478_RS07070 NZ_CP085478.1 Protein Homology CDS 1435390 1435878 . + 0 ID=cds-WP_002913214.1;Parent=gene-LI478_RS07070;Dbxref=Genbank:WP_002913214.1;Name=WP_002913214.1;gbkey=CDS;gene=cvpA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228072.1;locus_tag=LI478_RS07070;product=colicin V production protein;protein_id=WP_002913214.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1435912 1437429 . + . ID=gene-LI478_RS07075;Name=purF;gbkey=Gene;gene=purF;gene_biotype=protein_coding;locus_tag=LI478_RS07075 NZ_CP085478.1 Protein Homology CDS 1435912 1437429 . + 0 ID=cds-WP_002913213.1;Parent=gene-LI478_RS07075;Dbxref=Genbank:WP_002913213.1;Name=WP_002913213.1;Ontology_term=GO:0009152,GO:0004044;gbkey=CDS;gene=purF;go_function=amidophosphoribosyltransferase activity|0004044||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006820991.1;locus_tag=LI478_RS07075;product=amidophosphoribosyltransferase;protein_id=WP_002913213.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1437565 1438134 . + . ID=gene-LI478_RS07080;Name=LI478_RS07080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS07080 NZ_CP085478.1 Protein Homology CDS 1437565 1438134 . + 0 ID=cds-WP_002913212.1;Parent=gene-LI478_RS07080;Dbxref=Genbank:WP_002913212.1;Name=WP_002913212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228070.1;locus_tag=LI478_RS07080;product=UbiX family flavin prenyltransferase;protein_id=WP_002913212.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1438215 1438376 . - . ID=gene-LI478_RS07085;Name=LI478_RS07085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS07085 NZ_CP085478.1 Protein Homology CDS 1438215 1438376 . - 0 ID=cds-WP_004140952.1;Parent=gene-LI478_RS07085;Dbxref=Genbank:WP_004140952.1;Name=WP_004140952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228069.1;locus_tag=LI478_RS07085;product=hypothetical protein;protein_id=WP_004140952.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1438417 1439199 . + . ID=gene-LI478_RS07090;Name=argT;gbkey=Gene;gene=argT;gene_biotype=protein_coding;locus_tag=LI478_RS07090 NZ_CP085478.1 Protein Homology CDS 1438417 1439199 . + 0 ID=cds-WP_002913210.1;Parent=gene-LI478_RS07090;Dbxref=Genbank:WP_002913210.1;Name=WP_002913210.1;gbkey=CDS;gene=argT;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228068.1;locus_tag=LI478_RS07090;product=lysine/arginine/ornithine ABC transporter substrate-binding protein ArgT;protein_id=WP_002913210.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1439467 1440249 . + . ID=gene-LI478_RS07095;Name=hisJ;gbkey=Gene;gene=hisJ;gene_biotype=protein_coding;locus_tag=LI478_RS07095 NZ_CP085478.1 Protein Homology CDS 1439467 1440249 . + 0 ID=cds-WP_002913209.1;Parent=gene-LI478_RS07095;Dbxref=Genbank:WP_002913209.1;Name=WP_002913209.1;gbkey=CDS;gene=hisJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228067.1;locus_tag=LI478_RS07095;product=histidine ABC transporter substrate-binding protein HisJ;protein_id=WP_002913209.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1440314 1441000 . + . ID=gene-LI478_RS07100;Name=LI478_RS07100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS07100 NZ_CP085478.1 Protein Homology CDS 1440314 1441000 . + 0 ID=cds-WP_002913208.1;Parent=gene-LI478_RS07100;Dbxref=Genbank:WP_002913208.1;Name=WP_002913208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012124147.1;locus_tag=LI478_RS07100;product=histidine ABC transporter permease HisQ;protein_id=WP_002913208.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1440997 1441713 . + . ID=gene-LI478_RS07105;Name=hisM;gbkey=Gene;gene=hisM;gene_biotype=protein_coding;locus_tag=LI478_RS07105 NZ_CP085478.1 Protein Homology CDS 1440997 1441713 . + 0 ID=cds-WP_002913207.1;Parent=gene-LI478_RS07105;Dbxref=Genbank:WP_002913207.1;Name=WP_002913207.1;gbkey=CDS;gene=hisM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228065.1;locus_tag=LI478_RS07105;product=histidine ABC transporter permease HisM;protein_id=WP_002913207.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1441721 1442494 . + . ID=gene-LI478_RS07110;Name=hisP;gbkey=Gene;gene=hisP;gene_biotype=protein_coding;locus_tag=LI478_RS07110 NZ_CP085478.1 Protein Homology CDS 1441721 1442494 . + 0 ID=cds-WP_002913206.1;Parent=gene-LI478_RS07110;Dbxref=Genbank:WP_002913206.1;Name=WP_002913206.1;gbkey=CDS;gene=hisP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228064.1;locus_tag=LI478_RS07110;product=histidine ABC transporter ATP-binding protein HisP;protein_id=WP_002913206.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1442500 1443027 . - . ID=gene-LI478_RS07115;Name=LI478_RS07115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS07115 NZ_CP085478.1 Protein Homology CDS 1442500 1443027 . - 0 ID=cds-WP_004140943.1;Parent=gene-LI478_RS07115;Dbxref=Genbank:WP_004140943.1;Name=WP_004140943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228063.1;locus_tag=LI478_RS07115;product=GNAT family N-acetyltransferase;protein_id=WP_004140943.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1443147 1443263 . + . ID=gene-LI478_RS07120;Name=LI478_RS07120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS07120 NZ_CP085478.1 Protein Homology CDS 1443147 1443263 . + 0 ID=cds-WP_004217247.1;Parent=gene-LI478_RS07120;Dbxref=Genbank:WP_004217247.1;Name=WP_004217247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228062.1;locus_tag=LI478_RS07120;product=hypothetical protein;protein_id=WP_004217247.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1443243 1444136 . - . ID=gene-LI478_RS07125;Name=LI478_RS07125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS07125 NZ_CP085478.1 Protein Homology CDS 1443243 1444136 . - 0 ID=cds-WP_002913203.1;Parent=gene-LI478_RS07125;Dbxref=Genbank:WP_002913203.1;Name=WP_002913203.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228061.1;locus_tag=LI478_RS07125;product=TIGR01777 family oxidoreductase;protein_id=WP_002913203.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1444155 1444517 . - . ID=gene-LI478_RS07130;Name=folX;gbkey=Gene;gene=folX;gene_biotype=protein_coding;locus_tag=LI478_RS07130 NZ_CP085478.1 Protein Homology CDS 1444155 1444517 . - 0 ID=cds-WP_002913200.1;Parent=gene-LI478_RS07130;Dbxref=Genbank:WP_002913200.1;Name=WP_002913200.1;Ontology_term=GO:0006760,GO:0004150;gbkey=CDS;gene=folX;go_function=dihydroneopterin aldolase activity|0004150||IEA;go_process=folic acid-containing compound metabolic process|0006760||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228060.1;locus_tag=LI478_RS07130;product=dihydroneopterin triphosphate 2'-epimerase;protein_id=WP_002913200.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1444583 1445212 . - . ID=gene-LI478_RS07135;Name=yfcG;gbkey=Gene;gene=yfcG;gene_biotype=protein_coding;locus_tag=LI478_RS07135 NZ_CP085478.1 Protein Homology CDS 1444583 1445212 . - 0 ID=cds-WP_004174988.1;Parent=gene-LI478_RS07135;Dbxref=Genbank:WP_004174988.1;Name=WP_004174988.1;gbkey=CDS;gene=yfcG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228059.1;locus_tag=LI478_RS07135;product=GSH-dependent disulfide bond oxidoreductase;protein_id=WP_004174988.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1445393 1446031 . + . ID=gene-LI478_RS07140;Name=yfcF;gbkey=Gene;gene=yfcF;gene_biotype=protein_coding;locus_tag=LI478_RS07140 NZ_CP085478.1 Protein Homology CDS 1445393 1446031 . + 0 ID=cds-WP_004180746.1;Parent=gene-LI478_RS07140;Dbxref=Genbank:WP_004180746.1;Name=WP_004180746.1;Ontology_term=GO:0006749;gbkey=CDS;gene=yfcF;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228058.1;locus_tag=LI478_RS07140;product=glutathione transferase;protein_id=WP_004180746.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1446094 1446645 . + . ID=gene-LI478_RS07145;Name=yfcE;gbkey=Gene;gene=yfcE;gene_biotype=protein_coding;locus_tag=LI478_RS07145 NZ_CP085478.1 Protein Homology CDS 1446094 1446645 . + 0 ID=cds-WP_004174991.1;Parent=gene-LI478_RS07145;Dbxref=Genbank:WP_004174991.1;Name=WP_004174991.1;gbkey=CDS;gene=yfcE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228057.1;locus_tag=LI478_RS07145;product=phosphodiesterase;protein_id=WP_004174991.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1446703 1447254 . + . ID=gene-LI478_RS07150;Name=yfcD;gbkey=Gene;gene=yfcD;gene_biotype=protein_coding;locus_tag=LI478_RS07150 NZ_CP085478.1 Protein Homology CDS 1446703 1447254 . + 0 ID=cds-WP_002913197.1;Parent=gene-LI478_RS07150;Dbxref=Genbank:WP_002913197.1;Name=WP_002913197.1;Ontology_term=GO:0016817;gbkey=CDS;gene=yfcD;go_function=hydrolase activity%2C acting on acid anhydrides|0016817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228056.1;locus_tag=LI478_RS07150;product=NUDIX hydrolase YfcD;protein_id=WP_002913197.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1447347 1449494 . - . ID=gene-LI478_RS07155;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=LI478_RS07155 NZ_CP085478.1 Protein Homology CDS 1447347 1449494 . - 0 ID=cds-WP_002913196.1;Parent=gene-LI478_RS07155;Dbxref=Genbank:WP_002913196.1;Name=WP_002913196.1;Ontology_term=GO:0016407;gbkey=CDS;gene=pta;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228055.1;locus_tag=LI478_RS07155;product=phosphate acetyltransferase;protein_id=WP_002913196.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1449695 1450897 . - . ID=gene-LI478_RS07160;Name=ackA;gbkey=Gene;gene=ackA;gene_biotype=protein_coding;locus_tag=LI478_RS07160 NZ_CP085478.1 Protein Homology CDS 1449695 1450897 . - 0 ID=cds-WP_002913195.1;Parent=gene-LI478_RS07160;Dbxref=Genbank:WP_002913195.1;Name=WP_002913195.1;gbkey=CDS;gene=ackA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129491.1;locus_tag=LI478_RS07160;product=acetate kinase;protein_id=WP_002913195.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1451235 1451690 . + . ID=gene-LI478_RS07165;Name=LI478_RS07165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS07165 NZ_CP085478.1 Protein Homology CDS 1451235 1451690 . + 0 ID=cds-WP_002913194.1;Parent=gene-LI478_RS07165;Dbxref=Genbank:WP_002913194.1;Name=WP_002913194.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228053.1;locus_tag=LI478_RS07165;product=DUF412 domain-containing protein;protein_id=WP_002913194.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1451778 1452272 . + . ID=gene-LI478_RS07170;Name=LI478_RS07170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS07170 NZ_CP085478.1 Protein Homology CDS 1451778 1452272 . + 0 ID=cds-WP_002913193.1;Parent=gene-LI478_RS07170;Dbxref=Genbank:WP_002913193.1;Name=WP_002913193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007371080.1;locus_tag=LI478_RS07170;product=YfbU family protein;protein_id=WP_002913193.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1452284 1452943 . + . ID=gene-LI478_RS07175;Name=LI478_RS07175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS07175 NZ_CP085478.1 Protein Homology CDS 1452284 1452943 . + 0 ID=cds-WP_064153439.1;Parent=gene-LI478_RS07175;Dbxref=Genbank:WP_064153439.1;Name=WP_064153439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228051.1;locus_tag=LI478_RS07175;product=sugar phosphatase;protein_id=WP_064153439.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1453020 1454852 . + . ID=gene-LI478_RS07180;Name=LI478_RS07180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS07180 NZ_CP085478.1 Protein Homology CDS 1453020 1454852 . + 0 ID=cds-WP_009484760.1;Parent=gene-LI478_RS07180;Dbxref=Genbank:WP_009484760.1;Name=WP_009484760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228050.1;locus_tag=LI478_RS07180;product=SLC13 family permease;protein_id=WP_009484760.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1454897 1455496 . - . ID=gene-LI478_RS07185;Name=yfbR;gbkey=Gene;gene=yfbR;gene_biotype=protein_coding;locus_tag=LI478_RS07185 NZ_CP085478.1 Protein Homology CDS 1454897 1455496 . - 0 ID=cds-WP_002913188.1;Parent=gene-LI478_RS07185;Dbxref=Genbank:WP_002913188.1;Name=WP_002913188.1;Ontology_term=GO:0002953;gbkey=CDS;gene=yfbR;go_function=5'-deoxynucleotidase activity|0002953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228049.1;locus_tag=LI478_RS07185;product=5'-deoxynucleotidase;protein_id=WP_002913188.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1455578 1456795 . - . ID=gene-LI478_RS07190;Name=alaA;gbkey=Gene;gene=alaA;gene_biotype=protein_coding;locus_tag=LI478_RS07190 NZ_CP085478.1 Protein Homology CDS 1455578 1456795 . - 0 ID=cds-WP_002913185.1;Parent=gene-LI478_RS07190;Dbxref=Genbank:WP_002913185.1;Name=WP_002913185.1;gbkey=CDS;gene=alaA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228048.1;locus_tag=LI478_RS07190;product=alanine transaminase AlaA;protein_id=WP_002913185.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1457668 1458594 . + . ID=gene-LI478_RS07195;Name=LI478_RS07195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS07195 NZ_CP085478.1 Protein Homology CDS 1457668 1458594 . + 0 ID=cds-WP_019705508.1;Parent=gene-LI478_RS07195;Dbxref=Genbank:WP_019705508.1;Name=WP_019705508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228047.1;locus_tag=LI478_RS07195;product=LysR family transcriptional regulator;protein_id=WP_019705508.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1459246 1459692 . + . ID=gene-LI478_RS07200;Name=nuoA;gbkey=Gene;gene=nuoA;gene_biotype=protein_coding;locus_tag=LI478_RS07200 NZ_CP085478.1 Protein Homology CDS 1459246 1459692 . + 0 ID=cds-WP_002913181.1;Parent=gene-LI478_RS07200;Dbxref=Genbank:WP_002913181.1;Name=WP_002913181.1;gbkey=CDS;gene=nuoA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002913181.1;locus_tag=LI478_RS07200;product=NADH-quinone oxidoreductase subunit NuoA;protein_id=WP_002913181.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1459708 1460382 . + . ID=gene-LI478_RS07205;Name=nuoB;gbkey=Gene;gene=nuoB;gene_biotype=protein_coding;locus_tag=LI478_RS07205 NZ_CP085478.1 Protein Homology CDS 1459708 1460382 . + 0 ID=cds-WP_002913178.1;Parent=gene-LI478_RS07205;Dbxref=Genbank:WP_002913178.1;Name=WP_002913178.1;gbkey=CDS;gene=nuoB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228044.1;locus_tag=LI478_RS07205;product=NADH-quinone oxidoreductase subunit NuoB;protein_id=WP_002913178.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1460469 1462277 . + . ID=gene-LI478_RS07210;Name=nuoC;gbkey=Gene;gene=nuoC;gene_biotype=protein_coding;locus_tag=LI478_RS07210 NZ_CP085478.1 Protein Homology CDS 1460469 1462277 . + 0 ID=cds-WP_002913162.1;Parent=gene-LI478_RS07210;Dbxref=Genbank:WP_002913162.1;Name=WP_002913162.1;Ontology_term=GO:0048038,GO:0050136,GO:0051287,GO:0030964;gbkey=CDS;gene=nuoC;go_component=NADH dehydrogenase complex|0030964||IEA;go_function=quinone binding|0048038||IEA,NADH dehydrogenase (quinone) activity|0050136||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228043.1;locus_tag=LI478_RS07210;product=NADH-quinone oxidoreductase subunit C/D;protein_id=WP_002913162.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1462280 1462780 . + . ID=gene-LI478_RS07215;Name=nuoE;gbkey=Gene;gene=nuoE;gene_biotype=protein_coding;locus_tag=LI478_RS07215 NZ_CP085478.1 Protein Homology CDS 1462280 1462780 . + 0 ID=cds-WP_002913160.1;Parent=gene-LI478_RS07215;Dbxref=Genbank:WP_002913160.1;Name=WP_002913160.1;Ontology_term=GO:0016491;gbkey=CDS;gene=nuoE;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228042.1;locus_tag=LI478_RS07215;product=NADH-quinone oxidoreductase subunit NuoE;protein_id=WP_002913160.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1462777 1464114 . + . ID=gene-LI478_RS07220;Name=nuoF;gbkey=Gene;gene=nuoF;gene_biotype=protein_coding;locus_tag=LI478_RS07220 NZ_CP085478.1 Protein Homology CDS 1462777 1464114 . + 0 ID=cds-WP_002913158.1;Parent=gene-LI478_RS07220;Dbxref=Genbank:WP_002913158.1;Name=WP_002913158.1;Ontology_term=GO:0008137,GO:0051539;gbkey=CDS;gene=nuoF;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228041.1;locus_tag=LI478_RS07220;product=NADH-quinone oxidoreductase subunit NuoF;protein_id=WP_002913158.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1464147 1466873 . + . ID=gene-LI478_RS07225;Name=nuoG;gbkey=Gene;gene=nuoG;gene_biotype=protein_coding;locus_tag=LI478_RS07225 NZ_CP085478.1 Protein Homology CDS 1464147 1466873 . + 0 ID=cds-WP_004149179.1;Parent=gene-LI478_RS07225;Dbxref=Genbank:WP_004149179.1;Name=WP_004149179.1;Ontology_term=GO:0006120,GO:0050136;gbkey=CDS;gene=nuoG;go_function=NADH dehydrogenase (quinone) activity|0050136||IEA;go_process=mitochondrial electron transport%2C NADH to ubiquinone|0006120||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017899275.1;locus_tag=LI478_RS07225;product=NADH-quinone oxidoreductase subunit NuoG;protein_id=WP_004149179.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1466870 1467847 . + . ID=gene-LI478_RS07230;Name=nuoH;gbkey=Gene;gene=nuoH;gene_biotype=protein_coding;locus_tag=LI478_RS07230 NZ_CP085478.1 Protein Homology CDS 1466870 1467847 . + 0 ID=cds-WP_002913156.1;Parent=gene-LI478_RS07230;Dbxref=Genbank:WP_002913156.1;Name=WP_002913156.1;gbkey=CDS;gene=nuoH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875065.1;locus_tag=LI478_RS07230;product=NADH-quinone oxidoreductase subunit NuoH;protein_id=WP_002913156.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1467862 1468404 . + . ID=gene-LI478_RS07235;Name=nuoI;gbkey=Gene;gene=nuoI;gene_biotype=protein_coding;locus_tag=LI478_RS07235 NZ_CP085478.1 Protein Homology CDS 1467862 1468404 . + 0 ID=cds-WP_002913152.1;Parent=gene-LI478_RS07235;Dbxref=Genbank:WP_002913152.1;Name=WP_002913152.1;Ontology_term=GO:0016651,GO:0051539,GO:0016020;gbkey=CDS;gene=nuoI;go_component=membrane|0016020||IEA;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015959823.1;locus_tag=LI478_RS07235;product=NADH-quinone oxidoreductase subunit NuoI;protein_id=WP_002913152.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1468416 1468970 . + . ID=gene-LI478_RS07240;Name=nuoJ;gbkey=Gene;gene=nuoJ;gene_biotype=protein_coding;locus_tag=LI478_RS07240 NZ_CP085478.1 Protein Homology CDS 1468416 1468970 . + 0 ID=cds-WP_002913150.1;Parent=gene-LI478_RS07240;Dbxref=Genbank:WP_002913150.1;Name=WP_002913150.1;Ontology_term=GO:0008137;gbkey=CDS;gene=nuoJ;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228037.1;locus_tag=LI478_RS07240;product=NADH-quinone oxidoreductase subunit J;protein_id=WP_002913150.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1468967 1469269 . + . ID=gene-LI478_RS07245;Name=nuoK;gbkey=Gene;gene=nuoK;gene_biotype=protein_coding;locus_tag=LI478_RS07245 NZ_CP085478.1 Protein Homology CDS 1468967 1469269 . + 0 ID=cds-WP_002913148.1;Parent=gene-LI478_RS07245;Dbxref=Genbank:WP_002913148.1;Name=WP_002913148.1;Ontology_term=GO:0042773,GO:0016651;gbkey=CDS;gene=nuoK;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006683663.1;locus_tag=LI478_RS07245;product=NADH-quinone oxidoreductase subunit NuoK;protein_id=WP_002913148.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1469266 1471107 . + . ID=gene-LI478_RS07250;Name=nuoL;gbkey=Gene;gene=nuoL;gene_biotype=protein_coding;locus_tag=LI478_RS07250 NZ_CP085478.1 Protein Homology CDS 1469266 1471107 . + 0 ID=cds-WP_032415273.1;Parent=gene-LI478_RS07250;Dbxref=Genbank:WP_032415273.1;Name=WP_032415273.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoL;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129466.1;locus_tag=LI478_RS07250;product=NADH-quinone oxidoreductase subunit L;protein_id=WP_032415273.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1471277 1472806 . + . ID=gene-LI478_RS07255;Name=nuoM;gbkey=Gene;gene=nuoM;gene_biotype=protein_coding;locus_tag=LI478_RS07255 NZ_CP085478.1 Protein Homology CDS 1471277 1472806 . + 0 ID=cds-WP_002913146.1;Parent=gene-LI478_RS07255;Dbxref=Genbank:WP_002913146.1;Name=WP_002913146.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoM;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129465.1;locus_tag=LI478_RS07255;product=NADH-quinone oxidoreductase subunit M;protein_id=WP_002913146.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1472813 1474276 . + . ID=gene-LI478_RS07260;Name=nuoN;gbkey=Gene;gene=nuoN;gene_biotype=protein_coding;locus_tag=LI478_RS07260 NZ_CP085478.1 Protein Homology CDS 1472813 1474276 . + 0 ID=cds-WP_227394177.1;Parent=gene-LI478_RS07260;Dbxref=Genbank:WP_227394177.1;Name=WP_227394177.1;Ontology_term=GO:0008137;gbkey=CDS;gene=nuoN;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228033.1;locus_tag=LI478_RS07260;product=NADH-quinone oxidoreductase subunit NuoN;protein_id=WP_227394177.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1474331 1475251 . - . ID=gene-LI478_RS07265;Name=rnz;gbkey=Gene;gene=rnz;gene_biotype=protein_coding;locus_tag=LI478_RS07265 NZ_CP085478.1 Protein Homology CDS 1474331 1475251 . - 0 ID=cds-WP_004214593.1;Parent=gene-LI478_RS07265;Dbxref=Genbank:WP_004214593.1;Name=WP_004214593.1;Ontology_term=GO:0042779,GO:0016891;gbkey=CDS;gene=rnz;go_function=endoribonuclease activity%2C producing 5'-phosphomonoesters|0016891||IEA;go_process=tRNA 3'-trailer cleavage|0042779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228032.1;locus_tag=LI478_RS07265;product=ribonuclease Z;protein_id=WP_004214593.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1475309 1475770 . + . ID=gene-LI478_RS07270;Name=LI478_RS07270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS07270 NZ_CP085478.1 Protein Homology CDS 1475309 1475770 . + 0 ID=cds-WP_032415272.1;Parent=gene-LI478_RS07270;Dbxref=Genbank:WP_032415272.1;Name=WP_032415272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228031.1;locus_tag=LI478_RS07270;product=GNAT family N-acetyltransferase;protein_id=WP_032415272.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1475906 1477195 . + . ID=gene-LI478_RS07275;Name=menF;gbkey=Gene;gene=menF;gene_biotype=protein_coding;locus_tag=LI478_RS07275 NZ_CP085478.1 Protein Homology CDS 1475906 1477195 . + 0 ID=cds-WP_032415271.1;Parent=gene-LI478_RS07275;Dbxref=Genbank:WP_032415271.1;Name=WP_032415271.1;Ontology_term=GO:0008909;gbkey=CDS;gene=menF;go_function=isochorismate synthase activity|0008909||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228030.1;locus_tag=LI478_RS07275;product=isochorismate synthase MenF;protein_id=WP_032415271.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1477278 1478948 . + . ID=gene-LI478_RS07280;Name=menD;gbkey=Gene;gene=menD;gene_biotype=protein_coding;locus_tag=LI478_RS07280 NZ_CP085478.1 Protein Homology CDS 1477278 1478948 . + 0 ID=cds-WP_032415270.1;Parent=gene-LI478_RS07280;Dbxref=Genbank:WP_032415270.1;Name=WP_032415270.1;Ontology_term=GO:0009234,GO:0070204;gbkey=CDS;gene=menD;go_function=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase activity|0070204||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228029.1;locus_tag=LI478_RS07280;product=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase;protein_id=WP_032415270.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1478945 1479703 . + . ID=gene-LI478_RS07285;Name=menH;gbkey=Gene;gene=menH;gene_biotype=protein_coding;locus_tag=LI478_RS07285 NZ_CP085478.1 Protein Homology CDS 1478945 1479703 . + 0 ID=cds-WP_032415269.1;Parent=gene-LI478_RS07285;Dbxref=Genbank:WP_032415269.1;Name=WP_032415269.1;Ontology_term=GO:0009234,GO:0070205;gbkey=CDS;gene=menH;go_function=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase activity|0070205||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228028.1;locus_tag=LI478_RS07285;product=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase;protein_id=WP_032415269.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1479718 1480575 . + . ID=gene-LI478_RS07290;Name=menB;gbkey=Gene;gene=menB;gene_biotype=protein_coding;locus_tag=LI478_RS07290 NZ_CP085478.1 Protein Homology CDS 1479718 1480575 . + 0 ID=cds-WP_002913098.1;Parent=gene-LI478_RS07290;Dbxref=Genbank:WP_002913098.1;Name=WP_002913098.1;Ontology_term=GO:0009234,GO:0008935;gbkey=CDS;gene=menB;go_function=1%2C4-dihydroxy-2-naphthoyl-CoA synthase activity|0008935||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228027.1;locus_tag=LI478_RS07290;product=1%2C4-dihydroxy-2-naphthoyl-CoA synthase;protein_id=WP_002913098.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1480575 1481540 . + . ID=gene-LI478_RS07295;Name=menC;gbkey=Gene;gene=menC;gene_biotype=protein_coding;locus_tag=LI478_RS07295 NZ_CP085478.1 Protein Homology CDS 1480575 1481540 . + 0 ID=cds-WP_064153437.1;Parent=gene-LI478_RS07295;Dbxref=Genbank:WP_064153437.1;Name=WP_064153437.1;Ontology_term=GO:0009234,GO:0000287,GO:0016836;gbkey=CDS;gene=menC;go_function=magnesium ion binding|0000287||IEA,hydro-lyase activity|0016836||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228026.1;locus_tag=LI478_RS07295;product=o-succinylbenzoate synthase;protein_id=WP_064153437.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1481537 1482913 . + . ID=gene-LI478_RS07300;Name=menE;gbkey=Gene;gene=menE;gene_biotype=protein_coding;locus_tag=LI478_RS07300 NZ_CP085478.1 Protein Homology CDS 1481537 1482913 . + 0 ID=cds-WP_023301700.1;Parent=gene-LI478_RS07300;Dbxref=Genbank:WP_023301700.1;Name=WP_023301700.1;Ontology_term=GO:0009234,GO:0005524,GO:0008756;gbkey=CDS;gene=menE;go_function=ATP binding|0005524||IEA,o-succinylbenzoate-CoA ligase activity|0008756||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228025.1;locus_tag=LI478_RS07300;product=o-succinylbenzoate--CoA ligase;protein_id=WP_023301700.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1482969 1483394 . - . ID=gene-LI478_RS07305;Name=nudI;gbkey=Gene;gene=nudI;gene_biotype=protein_coding;locus_tag=LI478_RS07305 NZ_CP085478.1 Protein Homology CDS 1482969 1483394 . - 0 ID=cds-WP_004184975.1;Parent=gene-LI478_RS07305;Dbxref=Genbank:WP_004184975.1;Name=WP_004184975.1;Ontology_term=GO:0016818;gbkey=CDS;gene=nudI;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228024.1;locus_tag=LI478_RS07305;product=nucleoside triphosphatase NudI;protein_id=WP_004184975.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1483532 1484485 . + . ID=gene-LI478_RS07310;Name=LI478_RS07310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS07310 NZ_CP085478.1 Protein Homology CDS 1483532 1484485 . + 0 ID=cds-WP_064153436.1;Parent=gene-LI478_RS07310;Dbxref=Genbank:WP_064153436.1;Name=WP_064153436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228023.1;locus_tag=LI478_RS07310;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WP_064153436.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1484760 1485302 . + . ID=gene-LI478_RS07315;Name=LI478_RS07315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS07315 NZ_CP085478.1 Protein Homology CDS 1484760 1485302 . + 0 ID=cds-WP_002913070.1;Parent=gene-LI478_RS07315;Dbxref=Genbank:WP_002913070.1;Name=WP_002913070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228021.1;locus_tag=LI478_RS07315;product=YfaZ family outer membrane protein;protein_id=WP_002913070.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1485405 1486601 . + . ID=gene-LI478_RS07320;Name=LI478_RS07320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS07320 NZ_CP085478.1 Protein Homology CDS 1485405 1486601 . + 0 ID=cds-WP_032411996.1;Parent=gene-LI478_RS07320;Dbxref=Genbank:WP_032411996.1;Name=WP_032411996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228020.1;locus_tag=LI478_RS07320;product=nicotinamide mononucleotide deamidase-related protein YfaY;protein_id=WP_032411996.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1486806 1487591 . + . ID=gene-LI478_RS07325;Name=LI478_RS07325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS07325 NZ_CP085478.1 Protein Homology CDS 1486806 1487591 . + 0 ID=cds-WP_002913046.1;Parent=gene-LI478_RS07325;Dbxref=Genbank:WP_002913046.1;Name=WP_002913046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228019.1;locus_tag=LI478_RS07325;product=IclR family transcriptional regulator;protein_id=WP_002913046.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1487602 1488807 . + . ID=gene-LI478_RS07330;Name=rhmD;gbkey=Gene;gene=rhmD;gene_biotype=protein_coding;locus_tag=LI478_RS07330 NZ_CP085478.1 Protein Homology CDS 1487602 1488807 . + 0 ID=cds-WP_004175029.1;Parent=gene-LI478_RS07330;Dbxref=Genbank:WP_004175029.1;Name=WP_004175029.1;Ontology_term=GO:0050032;gbkey=CDS;gene=rhmD;go_function=L-rhamnonate dehydratase activity|0050032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228018.1;locus_tag=LI478_RS07330;product=L-rhamnonate dehydratase;protein_id=WP_004175029.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1488850 1490139 . + . ID=gene-LI478_RS07335;Name=LI478_RS07335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS07335 NZ_CP085478.1 Protein Homology CDS 1488850 1490139 . + 0 ID=cds-WP_064153434.1;Parent=gene-LI478_RS07335;Dbxref=Genbank:WP_064153434.1;Name=WP_064153434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228017.1;locus_tag=LI478_RS07335;product=MFS transporter;protein_id=WP_064153434.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1490154 1490957 . + . ID=gene-LI478_RS07340;Name=yfaU;gbkey=Gene;gene=yfaU;gene_biotype=protein_coding;locus_tag=LI478_RS07340 NZ_CP085478.1 Protein Homology CDS 1490154 1490957 . + 0 ID=cds-WP_002913043.1;Parent=gene-LI478_RS07340;Dbxref=Genbank:WP_002913043.1;Name=WP_002913043.1;gbkey=CDS;gene=yfaU;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228016.1;locus_tag=LI478_RS07340;product=2-keto-3-deoxy-L-rhamnonate aldolase;protein_id=WP_002913043.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1490979 1492157 . - . ID=gene-LI478_RS07345;Name=glpC;gbkey=Gene;gene=glpC;gene_biotype=protein_coding;locus_tag=LI478_RS07345 NZ_CP085478.1 Protein Homology CDS 1490979 1492157 . - 0 ID=cds-WP_002913041.1;Parent=gene-LI478_RS07345;Dbxref=Genbank:WP_002913041.1;Name=WP_002913041.1;Ontology_term=GO:0006071,GO:0004368,GO:0051536,GO:0009331;gbkey=CDS;gene=glpC;go_component=glycerol-3-phosphate dehydrogenase complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228015.1;locus_tag=LI478_RS07345;product=anaerobic glycerol-3-phosphate dehydrogenase subunit GlpC;protein_id=WP_002913041.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1492154 1493413 . - . ID=gene-LI478_RS07350;Name=glpB;gbkey=Gene;gene=glpB;gene_biotype=protein_coding;locus_tag=LI478_RS07350 NZ_CP085478.1 Protein Homology CDS 1492154 1493413 . - 0 ID=cds-WP_032438119.1;Parent=gene-LI478_RS07350;Dbxref=Genbank:WP_032438119.1;Name=WP_032438119.1;Ontology_term=GO:0004368;gbkey=CDS;gene=glpB;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228014.1;locus_tag=LI478_RS07350;product=glycerol-3-phosphate dehydrogenase subunit GlpB;protein_id=WP_032438119.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1493403 1495025 . - . ID=gene-LI478_RS07355;Name=glpA;gbkey=Gene;gene=glpA;gene_biotype=protein_coding;locus_tag=LI478_RS07355 NZ_CP085478.1 Protein Homology CDS 1493403 1495025 . - 0 ID=cds-WP_023282869.1;Parent=gene-LI478_RS07355;Dbxref=Genbank:WP_023282869.1;Name=WP_023282869.1;Ontology_term=GO:0006072,GO:0046174,GO:0004368,GO:0010181,GO:0050660,GO:0009331;gbkey=CDS;gene=glpA;go_component=glycerol-3-phosphate dehydrogenase complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA,FMN binding|0010181||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA,polyol catabolic process|0046174||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228013.1;locus_tag=LI478_RS07355;product=anaerobic glycerol-3-phosphate dehydrogenase subunit A;protein_id=WP_023282869.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1495297 1496643 . + . ID=gene-LI478_RS07360;Name=glpT;gbkey=Gene;gene=glpT;gene_biotype=protein_coding;locus_tag=LI478_RS07360 NZ_CP085478.1 Protein Homology CDS 1495297 1496643 . + 0 ID=cds-WP_002913019.1;Parent=gene-LI478_RS07360;Dbxref=Genbank:WP_002913019.1;Name=WP_002913019.1;Ontology_term=GO:0015794,GO:0015169,GO:0016020;gbkey=CDS;gene=glpT;go_component=membrane|0016020||IEA;go_function=glycerol-3-phosphate transmembrane transporter activity|0015169||IEA;go_process=glycerol-3-phosphate transmembrane transport|0015794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228012.1;locus_tag=LI478_RS07360;product=glycerol-3-phosphate transporter;protein_id=WP_002913019.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1496653 1497723 . + . ID=gene-LI478_RS07365;Name=glpQ;gbkey=Gene;gene=glpQ;gene_biotype=protein_coding;locus_tag=LI478_RS07365 NZ_CP085478.1 Protein Homology CDS 1496653 1497723 . + 0 ID=cds-WP_009484780.1;Parent=gene-LI478_RS07365;Dbxref=Genbank:WP_009484780.1;Name=WP_009484780.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;gene=glpQ;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004899547.1;locus_tag=LI478_RS07365;product=glycerophosphodiester phosphodiesterase;protein_id=WP_009484780.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1498187 1498441 . - . ID=gene-LI478_RS07370;Name=yfaE;gbkey=Gene;gene=yfaE;gene_biotype=protein_coding;locus_tag=LI478_RS07370 NZ_CP085478.1 Protein Homology CDS 1498187 1498441 . - 0 ID=cds-WP_002913017.1;Parent=gene-LI478_RS07370;Dbxref=Genbank:WP_002913017.1;Name=WP_002913017.1;Ontology_term=GO:0051537;gbkey=CDS;gene=yfaE;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228010.1;locus_tag=LI478_RS07370;product=class I ribonucleotide reductase maintenance protein YfaE;protein_id=WP_002913017.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1498441 1499571 . - . ID=gene-LI478_RS07375;Name=nrdB;gbkey=Gene;gene=nrdB;gene_biotype=protein_coding;locus_tag=LI478_RS07375 NZ_CP085478.1 Protein Homology CDS 1498441 1499571 . - 0 ID=cds-WP_004140835.1;Parent=gene-LI478_RS07375;Dbxref=Genbank:WP_004140835.1;Name=WP_004140835.1;Ontology_term=GO:0009263,GO:0016491;gbkey=CDS;gene=nrdB;go_function=oxidoreductase activity|0016491||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006683700.1;locus_tag=LI478_RS07375;product=ribonucleotide-diphosphate reductase subunit beta;protein_id=WP_004140835.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1499673 1501958 . - . ID=gene-LI478_RS07380;Name=nrdA;gbkey=Gene;gene=nrdA;gene_biotype=protein_coding;locus_tag=LI478_RS07380 NZ_CP085478.1 Protein Homology CDS 1499673 1501958 . - 0 ID=cds-WP_002913016.1;Parent=gene-LI478_RS07380;Dbxref=Genbank:WP_002913016.1;Name=WP_002913016.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129392.1;locus_tag=LI478_RS07380;product=ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_002913016.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1502303 1503031 . - . ID=gene-LI478_RS07385;Name=LI478_RS07385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS07385 NZ_CP085478.1 Protein Homology CDS 1502303 1503031 . - 0 ID=cds-WP_002913014.1;Parent=gene-LI478_RS07385;Dbxref=Genbank:WP_002913014.1;Name=WP_002913014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228007.1;locus_tag=LI478_RS07385;product=bifunctional 3-demethylubiquinone 3-O-methyltransferase/2-octaprenyl-6-hydroxy phenol methylase;protein_id=WP_002913014.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1503178 1505811 . + . ID=gene-LI478_RS07390;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;locus_tag=LI478_RS07390 NZ_CP085478.1 Protein Homology CDS 1503178 1505811 . + 0 ID=cds-WP_004140833.1;Parent=gene-LI478_RS07390;Dbxref=Genbank:WP_004140833.1;Name=WP_004140833.1;Ontology_term=GO:0006265,GO:0003916,GO:0003918,GO:0009330;gbkey=CDS;gene=gyrA;go_component=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) complex|0009330||IEA;go_function=DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228006.1;locus_tag=LI478_RS07390;product=DNA topoisomerase (ATP-hydrolyzing) subunit A;protein_id=WP_004140833.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1505943 1508783 . + . ID=gene-LI478_RS07395;Name=rcsC;gbkey=Gene;gene=rcsC;gene_biotype=protein_coding;locus_tag=LI478_RS07395 NZ_CP085478.1 Protein Homology CDS 1505943 1508783 . + 0 ID=cds-WP_002913009.1;Parent=gene-LI478_RS07395;Dbxref=Genbank:WP_002913009.1;Name=WP_002913009.1;Ontology_term=GO:0000160,GO:0006355,GO:0018106,GO:0000155,GO:0005524,GO:0016020;gbkey=CDS;gene=rcsC;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,peptidyl-histidine phosphorylation|0018106||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228005.1;locus_tag=LI478_RS07395;product=two-component system sensor histidine kinase RcsC;protein_id=WP_002913009.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1508829 1509479 . - . ID=gene-LI478_RS07400;Name=rcsB;gbkey=Gene;gene=rcsB;gene_biotype=protein_coding;locus_tag=LI478_RS07400 NZ_CP085478.1 Protein Homology CDS 1508829 1509479 . - 0 ID=cds-WP_002913007.1;Parent=gene-LI478_RS07400;Dbxref=Genbank:WP_002913007.1;Name=WP_002913007.1;gbkey=CDS;gene=rcsB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228004.1;locus_tag=LI478_RS07400;product=response regulator transcription factor RcsB;protein_id=WP_002913007.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1509495 1512152 . - . ID=gene-LI478_RS07405;Name=rcsD;gbkey=Gene;gene=rcsD;gene_biotype=protein_coding;locus_tag=LI478_RS07405 NZ_CP085478.1 Protein Homology CDS 1509495 1512152 . - 0 ID=cds-WP_032438125.1;Parent=gene-LI478_RS07405;Dbxref=Genbank:WP_032438125.1;Name=WP_032438125.1;Ontology_term=GO:0000160,GO:0009927,GO:0005886;gbkey=CDS;gene=rcsD;go_component=plasma membrane|0005886||IEA;go_function=histidine phosphotransfer kinase activity|0009927||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228003.1;locus_tag=LI478_RS07405;product=phosphotransferase RcsD;protein_id=WP_032438125.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1512924 1514018 . + . ID=gene-LI478_RS07410;Name=LI478_RS07410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS07410 NZ_CP085478.1 Protein Homology CDS 1512924 1514018 . + 0 ID=cds-WP_064153433.1;Parent=gene-LI478_RS07410;Dbxref=Genbank:WP_064153433.1;Name=WP_064153433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228001.1;locus_tag=LI478_RS07410;product=porin OmpC;protein_id=WP_064153433.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1514122 1515174 . + . ID=gene-LI478_RS07415;Name=apbE;gbkey=Gene;gene=apbE;gene_biotype=protein_coding;locus_tag=LI478_RS07415 NZ_CP085478.1 Protein Homology CDS 1514122 1515174 . + 0 ID=cds-WP_064153431.1;Parent=gene-LI478_RS07415;Dbxref=Genbank:WP_064153431.1;Name=WP_064153431.1;Ontology_term=GO:0017013;gbkey=CDS;gene=apbE;go_process=protein flavinylation|0017013||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228000.1;locus_tag=LI478_RS07415;product=FAD:protein FMN transferase ApbE;protein_id=WP_064153431.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1515248 1516312 . + . ID=gene-LI478_RS07420;Name=ada;gbkey=Gene;gene=ada;gene_biotype=protein_coding;locus_tag=LI478_RS07420 NZ_CP085478.1 Protein Homology CDS 1515248 1516312 . + 0 ID=cds-WP_048332213.1;Parent=gene-LI478_RS07420;Dbxref=Genbank:WP_048332213.1;Name=WP_048332213.1;Ontology_term=GO:0006281,GO:0006355,GO:0003700;gbkey=CDS;gene=ada;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=DNA repair|0006281||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227999.1;locus_tag=LI478_RS07420;product=bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada;protein_id=WP_048332213.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1516312 1516965 . + . ID=gene-LI478_RS07425;Name=alkB;gbkey=Gene;gene=alkB;gene_biotype=protein_coding;locus_tag=LI478_RS07425 NZ_CP085478.1 Protein Homology CDS 1516312 1516965 . + 0 ID=cds-WP_004140817.1;Parent=gene-LI478_RS07425;Dbxref=Genbank:WP_004140817.1;Name=WP_004140817.1;gbkey=CDS;gene=alkB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014907176.1;locus_tag=LI478_RS07425;product=DNA oxidative demethylase AlkB;protein_id=WP_004140817.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1517040 1518683 . + . ID=gene-LI478_RS07430;Name=LI478_RS07430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS07430 NZ_CP085478.1 Protein Homology CDS 1517040 1518683 . + 0 ID=cds-WP_004184919.1;Parent=gene-LI478_RS07430;Dbxref=Genbank:WP_004184919.1;Name=WP_004184919.1;Ontology_term=GO:0015833,GO:0140359,GO:1904680;gbkey=CDS;go_function=ABC-type transporter activity|0140359||IEA,peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227997.1;locus_tag=LI478_RS07430;product=multidrug ABC transporter permease/ATP-binding protein;protein_id=WP_004184919.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1518832 1520268 . + . ID=gene-LI478_RS07435;Name=mgtE;gbkey=Gene;gene=mgtE;gene_biotype=protein_coding;locus_tag=LI478_RS07435 NZ_CP085478.1 Protein Homology CDS 1518832 1520268 . + 0 ID=cds-WP_002912996.1;Parent=gene-LI478_RS07435;Dbxref=Genbank:WP_002912996.1;Name=WP_002912996.1;Ontology_term=GO:0015693,GO:0015095;gbkey=CDS;gene=mgtE;go_function=magnesium ion transmembrane transporter activity|0015095||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227996.1;locus_tag=LI478_RS07435;product=magnesium transporter;protein_id=WP_002912996.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1520231 1521391 . - . ID=gene-LI478_RS07440;Name=LI478_RS07440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS07440 NZ_CP085478.1 Protein Homology CDS 1520231 1521391 . - 0 ID=cds-WP_020324457.1;Parent=gene-LI478_RS07440;Dbxref=Genbank:WP_020324457.1;Name=WP_020324457.1;Ontology_term=GO:0008272,GO:0015116,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=sulfate transmembrane transporter activity|0015116||IEA;go_process=sulfate transport|0008272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227995.1;locus_tag=LI478_RS07440;product=SulP family inorganic anion transporter;protein_id=WP_020324457.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1521751 1523385 . + . ID=gene-LI478_RS07445;Name=mqo;gbkey=Gene;gene=mqo;gene_biotype=protein_coding;locus_tag=LI478_RS07445 NZ_CP085478.1 Protein Homology CDS 1521751 1523385 . + 0 ID=cds-WP_002912994.1;Parent=gene-LI478_RS07445;Dbxref=Genbank:WP_002912994.1;Name=WP_002912994.1;Ontology_term=GO:0006099,GO:0008924;gbkey=CDS;gene=mqo;go_function=malate dehydrogenase (quinone) activity|0008924||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227994.1;locus_tag=LI478_RS07445;product=malate dehydrogenase (quinone);protein_id=WP_002912994.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1523452 1523943 . - . ID=gene-LI478_RS07450;Name=eco;gbkey=Gene;gene=eco;gene_biotype=protein_coding;locus_tag=LI478_RS07450 NZ_CP085478.1 Protein Homology CDS 1523452 1523943 . - 0 ID=cds-WP_064153429.1;Parent=gene-LI478_RS07450;Dbxref=Genbank:WP_064153429.1;Name=WP_064153429.1;Ontology_term=GO:0004867;gbkey=CDS;gene=eco;go_function=serine-type endopeptidase inhibitor activity|0004867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227993.1;locus_tag=LI478_RS07450;product=serine protease inhibitor ecotin;protein_id=WP_064153429.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1524118 1525227 . - . ID=gene-LI478_RS07455;Name=LI478_RS07455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS07455 NZ_CP085478.1 Protein Homology CDS 1524118 1525227 . - 0 ID=cds-WP_002912992.1;Parent=gene-LI478_RS07455;Dbxref=Genbank:WP_002912992.1;Name=WP_002912992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227992.1;locus_tag=LI478_RS07455;product=AI-2E family transporter;protein_id=WP_002912992.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1525412 1525488 . - . ID=gene-LI478_RS07460;Name=LI478_RS07460;gbkey=Gene;gene_biotype=tRNA;locus_tag=LI478_RS07460 NZ_CP085478.1 tRNAscan-SE tRNA 1525412 1525488 . - . ID=rna-LI478_RS07460;Parent=gene-LI478_RS07460;anticodon=(pos:complement(1525452..1525454));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS07460;product=tRNA-Pro NZ_CP085478.1 tRNAscan-SE exon 1525412 1525488 . - . ID=exon-LI478_RS07460-1;Parent=rna-LI478_RS07460;anticodon=(pos:complement(1525452..1525454));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS07460;product=tRNA-Pro NZ_CP085478.1 RefSeq gene 1525565 1527325 . - . ID=gene-LI478_RS07465;Name=yejM;gbkey=Gene;gene=yejM;gene_biotype=protein_coding;locus_tag=LI478_RS07465 NZ_CP085478.1 Protein Homology CDS 1525565 1527325 . - 0 ID=cds-WP_002912990.1;Parent=gene-LI478_RS07465;Dbxref=Genbank:WP_002912990.1;Name=WP_002912990.1;Ontology_term=GO:0008484;gbkey=CDS;gene=yejM;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461172.1;locus_tag=LI478_RS07465;product=LPS biosynthesis-modulating metalloenzyme YejM;protein_id=WP_002912990.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1527344 1527571 . - . ID=gene-LI478_RS07470;Name=LI478_RS07470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS07470 NZ_CP085478.1 Protein Homology CDS 1527344 1527571 . - 0 ID=cds-WP_004195346.1;Parent=gene-LI478_RS07470;Dbxref=Genbank:WP_004195346.1;Name=WP_004195346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311106.1;locus_tag=LI478_RS07470;product=YejL family protein;protein_id=WP_004195346.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1527758 1528765 . + . ID=gene-LI478_RS07475;Name=yejK;gbkey=Gene;gene=yejK;gene_biotype=protein_coding;locus_tag=LI478_RS07475 NZ_CP085478.1 Protein Homology CDS 1527758 1528765 . + 0 ID=cds-WP_004144267.1;Parent=gene-LI478_RS07475;Dbxref=Genbank:WP_004144267.1;Name=WP_004144267.1;Ontology_term=GO:0009295;gbkey=CDS;gene=yejK;go_component=nucleoid|0009295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227989.1;locus_tag=LI478_RS07475;product=nucleoid-associated protein YejK;protein_id=WP_004144267.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1528785 1529546 . - . ID=gene-LI478_RS07480;Name=LI478_RS07480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS07480 NZ_CP085478.1 Protein Homology CDS 1528785 1529546 . - 0 ID=cds-WP_062920605.1;Parent=gene-LI478_RS07480;Dbxref=Genbank:WP_062920605.1;Name=WP_062920605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227988.1;locus_tag=LI478_RS07480;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_062920605.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1529629 1530225 . + . ID=gene-LI478_RS07485;Name=LI478_RS07485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS07485 NZ_CP085478.1 Protein Homology CDS 1529629 1530225 . + 0 ID=cds-WP_004144265.1;Parent=gene-LI478_RS07485;Dbxref=Genbank:WP_004144265.1;Name=WP_004144265.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227987.1;locus_tag=LI478_RS07485;product=NUDIX domain-containing protein;protein_id=WP_004144265.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1530244 1531530 . - . ID=gene-LI478_RS07490;Name=LI478_RS07490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS07490 NZ_CP085478.1 Protein Homology CDS 1530244 1531530 . - 0 ID=cds-WP_227394178.1;Parent=gene-LI478_RS07490;Dbxref=Genbank:WP_227394178.1;Name=WP_227394178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227986.1;locus_tag=LI478_RS07490;product=serine hydrolase;protein_id=WP_227394178.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1531635 1532522 . + . ID=gene-LI478_RS07495;Name=LI478_RS07495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS07495 NZ_CP085478.1 Protein Homology CDS 1531635 1532522 . + 0 ID=cds-WP_021463906.1;Parent=gene-LI478_RS07495;Dbxref=Genbank:WP_021463906.1;Name=WP_021463906.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227985.1;locus_tag=LI478_RS07495;product=LysR family transcriptional regulator;protein_id=WP_021463906.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1532581 1532865 . - . ID=gene-LI478_RS07500;Name=rplY;gbkey=Gene;gene=rplY;gene_biotype=protein_coding;locus_tag=LI478_RS07500 NZ_CP085478.1 Protein Homology CDS 1532581 1532865 . - 0 ID=cds-WP_004189006.1;Parent=gene-LI478_RS07500;Dbxref=Genbank:WP_004189006.1;Name=WP_004189006.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplY;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000494192.1;locus_tag=LI478_RS07500;product=50S ribosomal protein L25;protein_id=WP_004189006.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1533002 1534759 . - . ID=gene-LI478_RS07505;Name=LI478_RS07505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS07505 NZ_CP085478.1 Protein Homology CDS 1533002 1534759 . - 0 ID=cds-WP_004144263.1;Parent=gene-LI478_RS07505;Dbxref=Genbank:WP_004144263.1;Name=WP_004144263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227983.1;locus_tag=LI478_RS07505;product=DEAD/DEAH box helicase;protein_id=WP_004144263.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1534907 1535626 . + . ID=gene-LI478_RS07510;Name=rsuA;gbkey=Gene;gene=rsuA;gene_biotype=protein_coding;locus_tag=LI478_RS07510 NZ_CP085478.1 Protein Homology CDS 1534907 1535626 . + 0 ID=cds-WP_002912977.1;Parent=gene-LI478_RS07510;Dbxref=Genbank:WP_002912977.1;Name=WP_002912977.1;gbkey=CDS;gene=rsuA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227982.1;locus_tag=LI478_RS07510;product=16S rRNA pseudouridine(516) synthase RsuA;protein_id=WP_002912977.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1535623 1536819 . + . ID=gene-LI478_RS07515;Name=LI478_RS07515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS07515 NZ_CP085478.1 Protein Homology CDS 1535623 1536819 . + 0 ID=cds-WP_032415261.1;Parent=gene-LI478_RS07515;Dbxref=Genbank:WP_032415261.1;Name=WP_032415261.1;Ontology_term=GO:0042908,GO:1990961,GO:0042910,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic transport|0042908||IEA,xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227981.1;locus_tag=LI478_RS07515;product=Bcr/CflA family multidrug efflux MFS transporter;protein_id=WP_032415261.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1537151 1537495 . + . ID=gene-LI478_RS07520;Name=LI478_RS07520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS07520 NZ_CP085478.1 Protein Homology CDS 1537151 1537495 . + 0 ID=cds-WP_002912974.1;Parent=gene-LI478_RS07520;Dbxref=Genbank:WP_002912974.1;Name=WP_002912974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227980.1;locus_tag=LI478_RS07520;product=YejG family protein;protein_id=WP_002912974.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1537499 1539088 . - . ID=gene-LI478_RS07525;Name=yejF;gbkey=Gene;gene=yejF;gene_biotype=protein_coding;locus_tag=LI478_RS07525 NZ_CP085478.1 Protein Homology CDS 1537499 1539088 . - 0 ID=cds-WP_032415260.1;Parent=gene-LI478_RS07525;Dbxref=Genbank:WP_032415260.1;Name=WP_032415260.1;Ontology_term=GO:0006810,GO:0000166,GO:0005524;gbkey=CDS;gene=yejF;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227979.1;locus_tag=LI478_RS07525;product=microcin C ABC transporter ATP-binding protein YejF;protein_id=WP_032415260.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1539090 1540115 . - . ID=gene-LI478_RS07530;Name=LI478_RS07530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS07530 NZ_CP085478.1 Protein Homology CDS 1539090 1540115 . - 0 ID=cds-WP_020324348.1;Parent=gene-LI478_RS07530;Dbxref=Genbank:WP_020324348.1;Name=WP_020324348.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227978.1;locus_tag=LI478_RS07530;product=microcin C ABC transporter permease;protein_id=WP_020324348.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1540115 1541209 . - . ID=gene-LI478_RS07535;Name=LI478_RS07535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS07535 NZ_CP085478.1 Protein Homology CDS 1540115 1541209 . - 0 ID=cds-WP_064153427.1;Parent=gene-LI478_RS07535;Dbxref=Genbank:WP_064153427.1;Name=WP_064153427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227977.1;locus_tag=LI478_RS07535;product=microcin C ABC transporter permease YejB;protein_id=WP_064153427.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1541219 1543024 . - . ID=gene-LI478_RS07540;Name=LI478_RS07540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS07540 NZ_CP085478.1 Protein Homology CDS 1541219 1543024 . - 0 ID=cds-WP_064153426.1;Parent=gene-LI478_RS07540;Dbxref=Genbank:WP_064153426.1;Name=WP_064153426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227976.1;locus_tag=LI478_RS07540;product=extracellular solute-binding protein;protein_id=WP_064153426.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1543093 1544655 . - . ID=gene-LI478_RS07545;Name=LI478_RS07545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS07545 NZ_CP085478.1 Protein Homology CDS 1543093 1544655 . - 0 ID=cds-WP_004180649.1;Parent=gene-LI478_RS07545;Dbxref=Genbank:WP_004180649.1;Name=WP_004180649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227975.1;locus_tag=LI478_RS07545;product=cyclic di-GMP phosphodiesterase;protein_id=WP_004180649.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1544844 1545413 . - . ID=gene-LI478_RS07550;Name=mepS;gbkey=Gene;gene=mepS;gene_biotype=protein_coding;locus_tag=LI478_RS07550 NZ_CP085478.1 Protein Homology CDS 1544844 1545413 . - 0 ID=cds-WP_002912967.1;Parent=gene-LI478_RS07550;Dbxref=Genbank:WP_002912967.1;Name=WP_002912967.1;gbkey=CDS;gene=mepS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461158.1;locus_tag=LI478_RS07550;product=bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase;protein_id=WP_002912967.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1545839 1546552 . - . ID=gene-LI478_RS07555;Name=LI478_RS07555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS07555 NZ_CP085478.1 Protein Homology CDS 1545839 1546552 . - 0 ID=cds-WP_002912965.1;Parent=gene-LI478_RS07555;Dbxref=Genbank:WP_002912965.1;Name=WP_002912965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227973.1;locus_tag=LI478_RS07555;product=phosphatase PAP2 family protein;protein_id=WP_002912965.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1546590 1547567 . - . ID=gene-LI478_RS07560;Name=LI478_RS07560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS07560 NZ_CP085478.1 Protein Homology CDS 1546590 1547567 . - 0 ID=cds-WP_032103472.1;Parent=gene-LI478_RS07560;Dbxref=Genbank:WP_032103472.1;Name=WP_032103472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227972.1;locus_tag=LI478_RS07560;product=GTP-binding protein;protein_id=WP_032103472.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1547688 1549154 . - . ID=gene-LI478_RS07565;Name=LI478_RS07565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS07565 NZ_CP085478.1 Protein Homology CDS 1547688 1549154 . - 0 ID=cds-WP_032103471.1;Parent=gene-LI478_RS07565;Dbxref=Genbank:WP_032103471.1;Name=WP_032103471.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227971.1;locus_tag=LI478_RS07565;product=fructuronate reductase;protein_id=WP_032103471.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1549362 1550552 . + . ID=gene-LI478_RS07570;Name=uxuA;gbkey=Gene;gene=uxuA;gene_biotype=protein_coding;locus_tag=LI478_RS07570 NZ_CP085478.1 Protein Homology CDS 1549362 1550552 . + 0 ID=cds-WP_032447752.1;Parent=gene-LI478_RS07570;Dbxref=Genbank:WP_032447752.1;Name=WP_032447752.1;Ontology_term=GO:0006064,GO:0008927;gbkey=CDS;gene=uxuA;go_function=mannonate dehydratase activity|0008927||IEA;go_process=glucuronate catabolic process|0006064||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227970.1;locus_tag=LI478_RS07570;product=mannonate dehydratase;protein_id=WP_032447752.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1550623 1551195 . - . ID=gene-LI478_RS07575;Name=yeiP;gbkey=Gene;gene=yeiP;gene_biotype=protein_coding;locus_tag=LI478_RS07575 NZ_CP085478.1 Protein Homology CDS 1550623 1551195 . - 0 ID=cds-WP_002912951.1;Parent=gene-LI478_RS07575;Dbxref=Genbank:WP_002912951.1;Name=WP_002912951.1;Ontology_term=GO:0006414,GO:0043043,GO:0003746;gbkey=CDS;gene=yeiP;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA,peptide biosynthetic process|0043043||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007750416.1;locus_tag=LI478_RS07575;product=elongation factor P-like protein YeiP;protein_id=WP_002912951.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1551343 1551597 . + . ID=gene-LI478_RS07580;Name=LI478_RS07580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS07580 NZ_CP085478.1 Protein Homology CDS 1551343 1551597 . + 0 ID=cds-WP_004175066.1;Parent=gene-LI478_RS07580;Dbxref=Genbank:WP_004175066.1;Name=WP_004175066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004201647.1;locus_tag=LI478_RS07580;product=YkgJ family cysteine cluster protein;protein_id=WP_004175066.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1551637 1552818 . - . ID=gene-LI478_RS07585;Name=setB;gbkey=Gene;gene=setB;gene_biotype=protein_coding;locus_tag=LI478_RS07585 NZ_CP085478.1 Protein Homology CDS 1551637 1552818 . - 0 ID=cds-WP_004151122.1;Parent=gene-LI478_RS07585;Dbxref=Genbank:WP_004151122.1;Name=WP_004151122.1;Ontology_term=GO:0008643,GO:0055085,GO:0005351,GO:0022857,GO:0016020;gbkey=CDS;gene=setB;go_component=membrane|0016020||IEA;go_function=carbohydrate:proton symporter activity|0005351||IEA,transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227966.1;locus_tag=LI478_RS07585;product=sugar efflux transporter SetB;protein_id=WP_004151122.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1553155 1554285 . + . ID=gene-LI478_RS07590;Name=fruB;gbkey=Gene;gene=fruB;gene_biotype=protein_coding;locus_tag=LI478_RS07590 NZ_CP085478.1 Protein Homology CDS 1553155 1554285 . + 0 ID=cds-WP_002912947.1;Parent=gene-LI478_RS07590;Dbxref=Genbank:WP_002912947.1;Name=WP_002912947.1;gbkey=CDS;gene=fruB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227965.1;locus_tag=LI478_RS07590;product=fused PTS fructose transporter subunit IIA/HPr protein;protein_id=WP_002912947.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1554286 1555224 . + . ID=gene-LI478_RS07595;Name=fruK;gbkey=Gene;gene=fruK;gene_biotype=protein_coding;locus_tag=LI478_RS07595 NZ_CP085478.1 Protein Homology CDS 1554286 1555224 . + 0 ID=cds-WP_002912941.1;Parent=gene-LI478_RS07595;Dbxref=Genbank:WP_002912941.1;Name=WP_002912941.1;Ontology_term=GO:0008662,GO:0016773;gbkey=CDS;gene=fruK;go_function=1-phosphofructokinase activity|0008662||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227964.1;locus_tag=LI478_RS07595;product=1-phosphofructokinase;protein_id=WP_002912941.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1555241 1556935 . + . ID=gene-LI478_RS07600;Name=fruA;gbkey=Gene;gene=fruA;gene_biotype=protein_coding;locus_tag=LI478_RS07600 NZ_CP085478.1 Protein Homology CDS 1555241 1556935 . + 0 ID=cds-WP_002912939.1;Parent=gene-LI478_RS07600;Dbxref=Genbank:WP_002912939.1;Name=WP_002912939.1;Ontology_term=GO:0009401,GO:0008982,GO:0022877;gbkey=CDS;gene=fruA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227963.1;locus_tag=LI478_RS07600;product=PTS fructose transporter subunit IIBC;protein_id=WP_002912939.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1556987 1557841 . - . ID=gene-LI478_RS07605;Name=nfo;gbkey=Gene;gene=nfo;gene_biotype=protein_coding;locus_tag=LI478_RS07605 NZ_CP085478.1 Protein Homology CDS 1556987 1557841 . - 0 ID=cds-WP_002912937.1;Parent=gene-LI478_RS07605;Dbxref=Genbank:WP_002912937.1;Name=WP_002912937.1;Ontology_term=GO:0006281,GO:0003677,GO:0008270;gbkey=CDS;gene=nfo;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129226.1;locus_tag=LI478_RS07605;product=deoxyribonuclease IV;protein_id=WP_002912937.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1557914 1558963 . - . ID=gene-LI478_RS07610;Name=LI478_RS07610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS07610 NZ_CP085478.1 Protein Homology CDS 1557914 1558963 . - 0 ID=cds-WP_002912935.1;Parent=gene-LI478_RS07610;Dbxref=Genbank:WP_002912935.1;Name=WP_002912935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227961.1;locus_tag=LI478_RS07610;product=YeiH family protein;protein_id=WP_002912935.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1559229 1560095 . + . ID=gene-LI478_RS07615;Name=yieE;gbkey=Gene;gene=yieE;gene_biotype=protein_coding;locus_tag=LI478_RS07615 NZ_CP085478.1 Protein Homology CDS 1559229 1560095 . + 0 ID=cds-WP_002912932.1;Parent=gene-LI478_RS07615;Dbxref=Genbank:WP_002912932.1;Name=WP_002912932.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yieE;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227959.1;locus_tag=LI478_RS07615;product=DNA-binding transcriptional regulator YeiE;protein_id=WP_002912932.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1560274 1561743 . + . ID=gene-LI478_RS07620;Name=LI478_RS07620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS07620 NZ_CP085478.1 Protein Homology CDS 1560274 1561743 . + 0 ID=cds-WP_002912929.1;Parent=gene-LI478_RS07620;Dbxref=Genbank:WP_002912929.1;Name=WP_002912929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227958.1;locus_tag=LI478_RS07620;product=amino acid permease;protein_id=WP_002912929.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1562241 1564214 . + . ID=gene-LI478_RS07625;Name=cirA;gbkey=Gene;gene=cirA;gene_biotype=protein_coding;locus_tag=LI478_RS07625 NZ_CP085478.1 Protein Homology CDS 1562241 1564214 . + 0 ID=cds-WP_002912926.1;Parent=gene-LI478_RS07625;Dbxref=Genbank:WP_002912926.1;Name=WP_002912926.1;gbkey=CDS;gene=cirA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461144.1;locus_tag=LI478_RS07625;product=catecholate siderophore receptor CirA;protein_id=WP_002912926.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1564285 1565118 . - . ID=gene-LI478_RS07630;Name=fghA;gbkey=Gene;gene=fghA;gene_biotype=protein_coding;locus_tag=LI478_RS07630 NZ_CP085478.1 Protein Homology CDS 1564285 1565118 . - 0 ID=cds-WP_004151123.1;Parent=gene-LI478_RS07630;Dbxref=Genbank:WP_004151123.1;Name=WP_004151123.1;Ontology_term=GO:0046292,GO:0018738;gbkey=CDS;gene=fghA;go_function=S-formylglutathione hydrolase activity|0018738||IEA;go_process=formaldehyde metabolic process|0046292||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227955.1;locus_tag=LI478_RS07630;product=S-formylglutathione hydrolase;protein_id=WP_004151123.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1565479 1566147 . + . ID=gene-LI478_RS07635;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=LI478_RS07635 NZ_CP085478.1 Protein Homology CDS 1565479 1566147 . + 0 ID=cds-WP_004184878.1;Parent=gene-LI478_RS07635;Dbxref=Genbank:WP_004184878.1;Name=WP_004184878.1;Ontology_term=GO:0046654,GO:0003934;gbkey=CDS;gene=folE;go_function=GTP cyclohydrolase I activity|0003934||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227954.1;locus_tag=LI478_RS07635;product=GTP cyclohydrolase I FolE;protein_id=WP_004184878.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1566163 1567320 . + . ID=gene-LI478_RS07640;Name=LI478_RS07640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS07640 NZ_CP085478.1 Protein Homology CDS 1566163 1567320 . + 0 ID=cds-WP_002912921.1;Parent=gene-LI478_RS07640;Dbxref=Genbank:WP_002912921.1;Name=WP_002912921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227953.1;locus_tag=LI478_RS07640;product=DUF418 family protein;protein_id=WP_002912921.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1567476 1568498 . + . ID=gene-LI478_RS07645;Name=galS;gbkey=Gene;gene=galS;gene_biotype=protein_coding;locus_tag=LI478_RS07645 NZ_CP085478.1 Protein Homology CDS 1567476 1568498 . + 0 ID=cds-WP_002912919.1;Parent=gene-LI478_RS07645;Dbxref=Genbank:WP_002912919.1;Name=WP_002912919.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=galS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227952.1;locus_tag=LI478_RS07645;product=HTH-type transcriptional regulator GalS;protein_id=WP_002912919.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1568795 1569793 . + . ID=gene-LI478_RS07650;Name=mglB;gbkey=Gene;gene=mglB;gene_biotype=protein_coding;locus_tag=LI478_RS07650 NZ_CP085478.1 Protein Homology CDS 1568795 1569793 . + 0 ID=cds-WP_002912878.1;Parent=gene-LI478_RS07650;Dbxref=Genbank:WP_002912878.1;Name=WP_002912878.1;Ontology_term=GO:0030246;gbkey=CDS;gene=mglB;go_function=carbohydrate binding|0030246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416655.1;locus_tag=LI478_RS07650;product=galactose/glucose ABC transporter substrate-binding protein MglB;protein_id=WP_002912878.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1569912 1571432 . + . ID=gene-LI478_RS07655;Name=mglA;gbkey=Gene;gene=mglA;gene_biotype=protein_coding;locus_tag=LI478_RS07655 NZ_CP085478.1 Protein Homology CDS 1569912 1571432 . + 0 ID=cds-WP_002912876.1;Parent=gene-LI478_RS07655;Dbxref=Genbank:WP_002912876.1;Name=WP_002912876.1;Ontology_term=GO:0008643,GO:0005524,GO:0043211,GO:0016020;gbkey=CDS;gene=mglA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type carbohydrate transporter activity|0043211||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020883197.1;locus_tag=LI478_RS07655;product=galactose/methyl galactoside ABC transporter ATP-binding protein MglA;protein_id=WP_002912876.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1571448 1572458 . + . ID=gene-LI478_RS07660;Name=mglC;gbkey=Gene;gene=mglC;gene_biotype=protein_coding;locus_tag=LI478_RS07660 NZ_CP085478.1 Protein Homology CDS 1571448 1572458 . + 0 ID=cds-WP_002912871.1;Parent=gene-LI478_RS07660;Dbxref=Genbank:WP_002912871.1;Name=WP_002912871.1;Ontology_term=GO:0008643,GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mglC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129205.1;locus_tag=LI478_RS07660;product=galactose/methyl galactoside ABC transporter permease MglC;protein_id=WP_002912871.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1572529 1573245 . - . ID=gene-LI478_RS07665;Name=sanA;gbkey=Gene;gene=sanA;gene_biotype=protein_coding;locus_tag=LI478_RS07665 NZ_CP085478.1 Protein Homology CDS 1572529 1573245 . - 0 ID=cds-WP_002912870.1;Parent=gene-LI478_RS07665;Dbxref=Genbank:WP_002912870.1;Name=WP_002912870.1;gbkey=CDS;gene=sanA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227948.1;locus_tag=LI478_RS07665;product=outer membrane permeability protein SanA;protein_id=WP_002912870.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1573521 1574405 . - . ID=gene-LI478_RS07670;Name=cdd;gbkey=Gene;gene=cdd;gene_biotype=protein_coding;locus_tag=LI478_RS07670 NZ_CP085478.1 Protein Homology CDS 1573521 1574405 . - 0 ID=cds-WP_064153424.1;Parent=gene-LI478_RS07670;Dbxref=Genbank:WP_064153424.1;Name=WP_064153424.1;Ontology_term=GO:0009972,GO:0004126,GO:0008270;gbkey=CDS;gene=cdd;go_function=cytidine deaminase activity|0004126||IEA,zinc ion binding|0008270||IEA;go_process=cytidine deamination|0009972||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227947.1;locus_tag=LI478_RS07670;product=cytidine deaminase;protein_id=WP_064153424.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1574533 1575228 . - . ID=gene-LI478_RS07675;Name=LI478_RS07675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS07675 NZ_CP085478.1 Protein Homology CDS 1574533 1575228 . - 0 ID=cds-WP_002912867.1;Parent=gene-LI478_RS07675;Dbxref=Genbank:WP_002912867.1;Name=WP_002912867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227946.1;locus_tag=LI478_RS07675;product=CidB/LrgB family autolysis modulator;protein_id=WP_002912867.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1575225 1575623 . - . ID=gene-LI478_RS07680;Name=LI478_RS07680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS07680 NZ_CP085478.1 Protein Homology CDS 1575225 1575623 . - 0 ID=cds-WP_004175078.1;Parent=gene-LI478_RS07680;Dbxref=Genbank:WP_004175078.1;Name=WP_004175078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227945.1;locus_tag=LI478_RS07680;product=CidA/LrgA family protein;protein_id=WP_004175078.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1575981 1576913 . + . ID=gene-LI478_RS07685;Name=dusC;gbkey=Gene;gene=dusC;gene_biotype=protein_coding;locus_tag=LI478_RS07685 NZ_CP085478.1 Protein Homology CDS 1575981 1576913 . + 0 ID=cds-WP_002912862.1;Parent=gene-LI478_RS07685;Dbxref=Genbank:WP_002912862.1;Name=WP_002912862.1;Ontology_term=GO:0002943,GO:0017150,GO:0050660;gbkey=CDS;gene=dusC;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA dihydrouridine synthesis|0002943||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227944.1;locus_tag=LI478_RS07685;product=tRNA dihydrouridine(16) synthase DusC;protein_id=WP_002912862.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1577270 1578634 . + . ID=gene-LI478_RS07690;Name=LI478_RS07690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS07690 NZ_CP085478.1 Protein Homology CDS 1577270 1578634 . + 0 ID=cds-WP_048332946.1;Parent=gene-LI478_RS07690;Dbxref=Genbank:WP_048332946.1;Name=WP_048332946.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227943.1;locus_tag=LI478_RS07690;product=carbohydrate porin;protein_id=WP_048332946.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1578790 1579623 . + . ID=gene-LI478_RS07695;Name=bglG;gbkey=Gene;gene=bglG;gene_biotype=protein_coding;locus_tag=LI478_RS07695 NZ_CP085478.1 Protein Homology CDS 1578790 1579623 . + 0 ID=cds-WP_002912842.1;Parent=gene-LI478_RS07695;Dbxref=Genbank:WP_002912842.1;Name=WP_002912842.1;Ontology_term=GO:0006355;gbkey=CDS;gene=bglG;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004864750.1;locus_tag=LI478_RS07695;product=transcriptional antiterminator BglG;protein_id=WP_002912842.1;transl_table=11 NZ_CP085478.1 RefSeq pseudogene 1579654 1581628 . + . ID=gene-LI478_RS07700;Name=bglF;gbkey=Gene;gene=bglF;gene_biotype=pseudogene;locus_tag=LI478_RS07700;pseudo=true NZ_CP085478.1 Protein Homology CDS 1579654 1581628 . + 0 ID=cds-LI478_RS07700;Parent=gene-LI478_RS07700;Note=frameshifted;gbkey=CDS;gene=bglF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227941.1;locus_tag=LI478_RS07700;product=PTS beta-glucoside transporter subunit IIABC;pseudo=true;transl_table=11 NZ_CP085478.1 RefSeq gene 1581644 1583038 . + . ID=gene-LI478_RS07705;Name=ascB;gbkey=Gene;gene=ascB;gene_biotype=protein_coding;locus_tag=LI478_RS07705 NZ_CP085478.1 Protein Homology CDS 1581644 1583038 . + 0 ID=cds-WP_023313436.1;Parent=gene-LI478_RS07705;Dbxref=Genbank:WP_023313436.1;Name=WP_023313436.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=ascB;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227940.1;locus_tag=LI478_RS07705;product=6-phospho-beta-glucosidase;protein_id=WP_023313436.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1583310 1584749 . + . ID=gene-LI478_RS07710;Name=mdtQ;gbkey=Gene;gene=mdtQ;gene_biotype=protein_coding;locus_tag=LI478_RS07710 NZ_CP085478.1 Protein Homology CDS 1583310 1584749 . + 0 ID=cds-WP_004149095.1;Parent=gene-LI478_RS07710;Dbxref=Genbank:WP_004149095.1;Name=WP_004149095.1;Ontology_term=GO:0055085,GO:0015562,GO:0016020;gbkey=CDS;gene=mdtQ;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227938.1;locus_tag=LI478_RS07710;product=multidrug resistance outer membrane protein MdtQ;protein_id=WP_004149095.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1584783 1585352 . - . ID=gene-LI478_RS07715;Name=LI478_RS07715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS07715 NZ_CP085478.1 Protein Homology CDS 1584783 1585352 . - 0 ID=cds-WP_002912833.1;Parent=gene-LI478_RS07715;Dbxref=Genbank:WP_002912833.1;Name=WP_002912833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227937.1;locus_tag=LI478_RS07715;product=DedA family protein;protein_id=WP_002912833.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1585507 1586094 . + . ID=gene-LI478_RS07720;Name=LI478_RS07720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS07720 NZ_CP085478.1 Protein Homology CDS 1585507 1586094 . + 0 ID=cds-WP_002912831.1;Parent=gene-LI478_RS07720;Dbxref=Genbank:WP_002912831.1;Name=WP_002912831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227936.1;locus_tag=LI478_RS07720;product=Yip1 family protein;protein_id=WP_002912831.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1586283 1587233 . + . ID=gene-LI478_RS07725;Name=pbpG;gbkey=Gene;gene=pbpG;gene_biotype=protein_coding;locus_tag=LI478_RS07725 NZ_CP085478.1 Protein Homology CDS 1586283 1587233 . + 0 ID=cds-WP_004180615.1;Parent=gene-LI478_RS07725;Dbxref=Genbank:WP_004180615.1;Name=WP_004180615.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=pbpG;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227935.1;locus_tag=LI478_RS07725;product=D-alanyl-D-alanine endopeptidase;protein_id=WP_004180615.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1587479 1588842 . - . ID=gene-LI478_RS07730;Name=LI478_RS07730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS07730 NZ_CP085478.1 Protein Homology CDS 1588374 1588842 . - 0 ID=cds-WP_085955203.1-2;Parent=gene-LI478_RS07730;Dbxref=Genbank:WP_085955203.1;Name=WP_085955203.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611151.1;locus_tag=LI478_RS07730;product=IS3-like element ISKpn1 family transposase;protein_id=WP_085955203.1;transl_table=11 NZ_CP085478.1 Protein Homology CDS 1587479 1588374 . - 2 ID=cds-WP_085955203.1-2;Parent=gene-LI478_RS07730;Dbxref=Genbank:WP_085955203.1;Name=WP_085955203.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611151.1;locus_tag=LI478_RS07730;product=IS3-like element ISKpn1 family transposase;protein_id=WP_085955203.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1589610 1590164 . - . ID=gene-LI478_RS07735;Name=LI478_RS07735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS07735 NZ_CP085478.1 Protein Homology CDS 1589610 1590164 . - 0 ID=cds-WP_002912829.1;Parent=gene-LI478_RS07735;Dbxref=Genbank:WP_002912829.1;Name=WP_002912829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227934.1;locus_tag=LI478_RS07735;product=GNAT family N-acetyltransferase;protein_id=WP_002912829.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1590250 1591995 . - . ID=gene-LI478_RS07740;Name=dld;gbkey=Gene;gene=dld;gene_biotype=protein_coding;locus_tag=LI478_RS07740 NZ_CP085478.1 Protein Homology CDS 1590250 1591995 . - 0 ID=cds-WP_004200481.1;Parent=gene-LI478_RS07740;Dbxref=Genbank:WP_004200481.1;Name=WP_004200481.1;Ontology_term=GO:0006089,GO:0019516,GO:0016901;gbkey=CDS;gene=dld;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C quinone or similar compound as acceptor|0016901||IEA;go_process=lactate metabolic process|0006089||IEA,lactate oxidation|0019516||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227933.1;locus_tag=LI478_RS07740;product=D-lactate dehydrogenase;protein_id=WP_004200481.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1592190 1594487 . + . ID=gene-LI478_RS07745;Name=bglX;gbkey=Gene;gene=bglX;gene_biotype=protein_coding;locus_tag=LI478_RS07745 NZ_CP085478.1 Protein Homology CDS 1592190 1594487 . + 0 ID=cds-WP_102007302.1;Parent=gene-LI478_RS07745;Dbxref=Genbank:WP_102007302.1;Name=WP_102007302.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=bglX;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416636.1;locus_tag=LI478_RS07745;product=beta-glucosidase BglX;protein_id=WP_102007302.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1594624 1595541 . + . ID=gene-LI478_RS07750;Name=LI478_RS07750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS07750 NZ_CP085478.1 Protein Homology CDS 1594624 1595541 . + 0 ID=cds-WP_020804259.1;Parent=gene-LI478_RS07750;Dbxref=Genbank:WP_020804259.1;Name=WP_020804259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227931.1;locus_tag=LI478_RS07750;product=ABC transporter substrate-binding protein;protein_id=WP_020804259.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1595549 1596706 . + . ID=gene-LI478_RS07755;Name=LI478_RS07755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS07755 NZ_CP085478.1 Protein Homology CDS 1595549 1596706 . + 0 ID=cds-WP_064153688.1;Parent=gene-LI478_RS07755;Dbxref=Genbank:WP_064153688.1;Name=WP_064153688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227930.1;locus_tag=LI478_RS07755;product=ABC transporter permease;protein_id=WP_064153688.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1596699 1597646 . + . ID=gene-LI478_RS07760;Name=LI478_RS07760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS07760 NZ_CP085478.1 Protein Homology CDS 1596699 1597646 . + 0 ID=cds-WP_019725439.1;Parent=gene-LI478_RS07760;Dbxref=Genbank:WP_019725439.1;Name=WP_019725439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227929.1;locus_tag=LI478_RS07760;product=ABC transporter ATP-binding protein;protein_id=WP_019725439.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1597630 1598367 . + . ID=gene-LI478_RS07765;Name=LI478_RS07765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS07765 NZ_CP085478.1 Protein Homology CDS 1597630 1598367 . + 0 ID=cds-WP_004151128.1;Parent=gene-LI478_RS07765;Dbxref=Genbank:WP_004151128.1;Name=WP_004151128.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227928.1;locus_tag=LI478_RS07765;product=ABC transporter permease;protein_id=WP_004151128.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1598342 1598455 . - . ID=gene-LI478_RS07770;Name=LI478_RS07770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS07770 NZ_CP085478.1 Protein Homology CDS 1598342 1598455 . - 0 ID=cds-WP_002912762.1;Parent=gene-LI478_RS07770;Dbxref=Genbank:WP_002912762.1;Name=WP_002912762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227927.1;locus_tag=LI478_RS07770;product=protein YohO;protein_id=WP_002912762.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1598685 1600373 . + . ID=gene-LI478_RS07775;Name=LI478_RS07775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS07775 NZ_CP085478.1 Protein Homology CDS 1598685 1600373 . + 0 ID=cds-WP_032104290.1;Parent=gene-LI478_RS07775;Dbxref=Genbank:WP_032104290.1;Name=WP_032104290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227926.1;locus_tag=LI478_RS07775;product=sensor histidine kinase;protein_id=WP_032104290.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1600367 1601086 . + . ID=gene-LI478_RS07780;Name=btsR;gbkey=Gene;gene=btsR;gene_biotype=protein_coding;gene_synonym=yehT;locus_tag=LI478_RS07780 NZ_CP085478.1 Protein Homology CDS 1600367 1601086 . + 0 ID=cds-WP_004144215.1;Parent=gene-LI478_RS07780;Dbxref=Genbank:WP_004144215.1;Name=WP_004144215.1;gbkey=CDS;gene=btsR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227925.1;locus_tag=LI478_RS07780;product=two-component system response regulator BtsR;protein_id=WP_004144215.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1601134 1601604 . + . ID=gene-LI478_RS07785;Name=LI478_RS07785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS07785 NZ_CP085478.1 Protein Homology CDS 1601134 1601604 . + 0 ID=cds-WP_002912756.1;Parent=gene-LI478_RS07785;Dbxref=Genbank:WP_002912756.1;Name=WP_002912756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227924.1;locus_tag=LI478_RS07785;product=DUF1456 family protein;protein_id=WP_002912756.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1601722 1603755 . - . ID=gene-LI478_RS07790;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=LI478_RS07790 NZ_CP085478.1 Protein Homology CDS 1601722 1603755 . - 0 ID=cds-WP_064153696.1;Parent=gene-LI478_RS07790;Dbxref=Genbank:WP_064153696.1;Name=WP_064153696.1;Ontology_term=GO:0006431,GO:0000166,GO:0004825,GO:0005524;gbkey=CDS;gene=metG;go_function=nucleotide binding|0000166||IEA,methionine-tRNA ligase activity|0004825||IEA,ATP binding|0005524||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310947.1;locus_tag=LI478_RS07790;product=methionine--tRNA ligase;protein_id=WP_064153696.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1603909 1605018 . + . ID=gene-LI478_RS07795;Name=apbC;gbkey=Gene;gene=apbC;gene_biotype=protein_coding;locus_tag=LI478_RS07795 NZ_CP085478.1 Protein Homology CDS 1603909 1605018 . + 0 ID=cds-WP_002912751.1;Parent=gene-LI478_RS07795;Dbxref=Genbank:WP_002912751.1;Name=WP_002912751.1;Ontology_term=GO:0016226,GO:0005524,GO:0016887,GO:0051536;gbkey=CDS;gene=apbC;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461098.1;locus_tag=LI478_RS07795;product=iron-sulfur cluster carrier protein ApbC;protein_id=WP_002912751.1;transl_table=11 NZ_CP085478.1 RefSeq pseudogene 1605015 1605479 . - . ID=gene-LI478_RS07800;Name=LI478_RS07800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS07800;pseudo=true NZ_CP085478.1 Protein Homology CDS 1605015 1605479 . - 0 ID=cds-LI478_RS07800;Parent=gene-LI478_RS07800;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227919.1;locus_tag=LI478_RS07800;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11 NZ_CP085478.1 RefSeq gene 1605451 1605768 . - . ID=gene-LI478_RS07805;Name=LI478_RS07805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS07805 NZ_CP085478.1 Protein Homology CDS 1605451 1605768 . - 0 ID=cds-WP_032104243.1;Parent=gene-LI478_RS07805;Dbxref=Genbank:WP_032104243.1;Name=WP_032104243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227918.1;locus_tag=LI478_RS07805;product=RcnB family protein;protein_id=WP_032104243.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1605952 1606851 . + . ID=gene-LI478_RS07810;Name=LI478_RS07810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS07810 NZ_CP085478.1 Protein Homology CDS 1605952 1606851 . + 0 ID=cds-WP_004149074.1;Parent=gene-LI478_RS07810;Dbxref=Genbank:WP_004149074.1;Name=WP_004149074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227917.1;locus_tag=LI478_RS07810;product=LysR family transcriptional regulator;protein_id=WP_004149074.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1606841 1608184 . - . ID=gene-LI478_RS07815;Name=LI478_RS07815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS07815 NZ_CP085478.1 Protein Homology CDS 1606841 1608184 . - 0 ID=cds-WP_002912743.1;Parent=gene-LI478_RS07815;Dbxref=Genbank:WP_002912743.1;Name=WP_002912743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227916.1;locus_tag=LI478_RS07815;product=NCS2 family permease;protein_id=WP_002912743.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1608187 1609998 . - . ID=gene-LI478_RS07820;Name=LI478_RS07820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS07820 NZ_CP085478.1 Protein Homology CDS 1608187 1609998 . - 0 ID=cds-WP_032415250.1;Parent=gene-LI478_RS07820;Dbxref=Genbank:WP_032415250.1;Name=WP_032415250.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227915.1;locus_tag=LI478_RS07820;product=amidohydrolase family protein;protein_id=WP_032415250.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1610119 1611033 . + . ID=gene-LI478_RS07825;Name=LI478_RS07825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS07825 NZ_CP085478.1 Protein Homology CDS 1610119 1611033 . + 0 ID=cds-WP_004175111.1;Parent=gene-LI478_RS07825;Dbxref=Genbank:WP_004175111.1;Name=WP_004175111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227914.1;locus_tag=LI478_RS07825;product=LysR family transcriptional regulator;protein_id=WP_004175111.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1611030 1611452 . - . ID=gene-LI478_RS07830;Name=LI478_RS07830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS07830 NZ_CP085478.1 Protein Homology CDS 1611030 1611452 . - 0 ID=cds-WP_004189084.1;Parent=gene-LI478_RS07830;Dbxref=Genbank:WP_004189084.1;Name=WP_004189084.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227913.1;locus_tag=LI478_RS07830;product=universal stress protein;protein_id=WP_004189084.1;transl_table=11 NZ_CP085478.1 cmsearch riboswitch 1611638 1611735 . + . ID=id-NZ_CP085478.1:1611638..1611735;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_CP085478.1 RefSeq gene 1611770 1612543 . + . ID=gene-LI478_RS07835;Name=thiM;gbkey=Gene;gene=thiM;gene_biotype=protein_coding;locus_tag=LI478_RS07835 NZ_CP085478.1 Protein Homology CDS 1611770 1612543 . + 0 ID=cds-WP_004175113.1;Parent=gene-LI478_RS07835;Dbxref=Genbank:WP_004175113.1;Name=WP_004175113.1;Ontology_term=GO:0009228,GO:0004417;gbkey=CDS;gene=thiM;go_function=hydroxyethylthiazole kinase activity|0004417||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227911.1;locus_tag=LI478_RS07835;product=hydroxyethylthiazole kinase;protein_id=WP_004175113.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1612540 1613340 . + . ID=gene-LI478_RS07840;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=LI478_RS07840 NZ_CP085478.1 Protein Homology CDS 1612540 1613340 . + 0 ID=cds-WP_002912707.1;Parent=gene-LI478_RS07840;Dbxref=Genbank:WP_002912707.1;Name=WP_002912707.1;Ontology_term=GO:0009228,GO:0008902,GO:0008972;gbkey=CDS;gene=thiD;go_function=hydroxymethylpyrimidine kinase activity|0008902||IEA,phosphomethylpyrimidine kinase activity|0008972||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227910.1;locus_tag=LI478_RS07840;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=WP_002912707.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1613488 1614540 . + . ID=gene-LI478_RS07845;Name=fbaB;gbkey=Gene;gene=fbaB;gene_biotype=protein_coding;locus_tag=LI478_RS07845 NZ_CP085478.1 Protein Homology CDS 1613488 1614540 . + 0 ID=cds-WP_002912704.1;Parent=gene-LI478_RS07845;Dbxref=Genbank:WP_002912704.1;Name=WP_002912704.1;Ontology_term=GO:0004332;gbkey=CDS;gene=fbaB;go_function=fructose-bisphosphate aldolase activity|0004332||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006820796.1;locus_tag=LI478_RS07845;product=class I fructose-bisphosphate aldolase;protein_id=WP_002912704.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1614599 1615882 . - . ID=gene-LI478_RS07850;Name=LI478_RS07850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS07850 NZ_CP085478.1 Protein Homology CDS 1614599 1615882 . - 0 ID=cds-WP_004175116.1;Parent=gene-LI478_RS07850;Dbxref=Genbank:WP_004175116.1;Name=WP_004175116.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227908.1;locus_tag=LI478_RS07850;product=RbtT/DalT/CsbX family MFS transporter;protein_id=WP_004175116.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1615964 1617571 . - . ID=gene-LI478_RS07855;Name=LI478_RS07855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS07855 NZ_CP085478.1 Protein Homology CDS 1615964 1617571 . - 0 ID=cds-WP_048332205.1;Parent=gene-LI478_RS07855;Dbxref=Genbank:WP_048332205.1;Name=WP_048332205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227907.1;locus_tag=LI478_RS07855;product=FGGY-family carbohydrate kinase;protein_id=WP_048332205.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1617598 1618347 . - . ID=gene-LI478_RS07860;Name=LI478_RS07860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS07860 NZ_CP085478.1 Protein Homology CDS 1617598 1618347 . - 0 ID=cds-WP_004175119.1;Parent=gene-LI478_RS07860;Dbxref=Genbank:WP_004175119.1;Name=WP_004175119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227906.1;locus_tag=LI478_RS07860;product=SDR family oxidoreductase;protein_id=WP_004175119.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1618602 1619603 . + . ID=gene-LI478_RS07865;Name=LI478_RS07865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS07865 NZ_CP085478.1 Protein Homology CDS 1618602 1619603 . + 0 ID=cds-WP_064153689.1;Parent=gene-LI478_RS07865;Dbxref=Genbank:WP_064153689.1;Name=WP_064153689.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227905.1;locus_tag=LI478_RS07865;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_064153689.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1619626 1620567 . - . ID=gene-LI478_RS07870;Name=LI478_RS07870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS07870 NZ_CP085478.1 Protein Homology CDS 1619626 1620567 . - 0 ID=cds-WP_002912679.1;Parent=gene-LI478_RS07870;Dbxref=Genbank:WP_002912679.1;Name=WP_002912679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227904.1;locus_tag=LI478_RS07870;product=helix-turn-helix domain-containing protein;protein_id=WP_002912679.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1620774 1622141 . + . ID=gene-LI478_RS07875;Name=LI478_RS07875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS07875 NZ_CP085478.1 Protein Homology CDS 1620774 1622141 . + 0 ID=cds-WP_004184846.1;Parent=gene-LI478_RS07875;Dbxref=Genbank:WP_004184846.1;Name=WP_004184846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227903.1;locus_tag=LI478_RS07875;product=mannitol dehydrogenase family protein;protein_id=WP_004184846.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1622151 1623614 . + . ID=gene-LI478_RS07880;Name=xylB;gbkey=Gene;gene=xylB;gene_biotype=protein_coding;locus_tag=LI478_RS07880 NZ_CP085478.1 Protein Homology CDS 1622151 1623614 . + 0 ID=cds-WP_064153690.1;Parent=gene-LI478_RS07880;Dbxref=Genbank:WP_064153690.1;Name=WP_064153690.1;Ontology_term=GO:0005997,GO:0042732,GO:0004856,GO:0005515;gbkey=CDS;gene=xylB;go_function=xylulokinase activity|0004856||IEA,protein binding|0005515||IEA;go_process=xylulose metabolic process|0005997||IEA,D-xylose metabolic process|0042732||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227902.1;locus_tag=LI478_RS07880;product=xylulokinase;protein_id=WP_064153690.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1623685 1624959 . + . ID=gene-LI478_RS07885;Name=dalT;gbkey=Gene;gene=dalT;gene_biotype=protein_coding;locus_tag=LI478_RS07885 NZ_CP085478.1 Protein Homology CDS 1623685 1624959 . + 0 ID=cds-WP_064153691.1;Parent=gene-LI478_RS07885;Dbxref=Genbank:WP_064153691.1;Name=WP_064153691.1;gbkey=CDS;gene=dalT;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227901.1;locus_tag=LI478_RS07885;product=D-arabinitol transporter;protein_id=WP_064153691.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1625008 1625670 . + . ID=gene-LI478_RS07890;Name=LI478_RS07890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS07890 NZ_CP085478.1 Protein Homology CDS 1625008 1625670 . + 0 ID=cds-WP_064153692.1;Parent=gene-LI478_RS07890;Dbxref=Genbank:WP_064153692.1;Name=WP_064153692.1;Ontology_term=GO:0008152,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227900.1;locus_tag=LI478_RS07890;product=HAD-IA family hydrolase;protein_id=WP_064153692.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1625968 1627122 . + . ID=gene-LI478_RS07895;Name=LI478_RS07895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS07895 NZ_CP085478.1 Protein Homology CDS 1625968 1627122 . + 0 ID=cds-WP_064153693.1;Parent=gene-LI478_RS07895;Dbxref=Genbank:WP_064153693.1;Name=WP_064153693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227899.1;locus_tag=LI478_RS07895;product=mandelate racemase family protein;protein_id=WP_064153693.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1627242 1628864 . + . ID=gene-LI478_RS07900;Name=LI478_RS07900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS07900 NZ_CP085478.1 Protein Homology CDS 1627242 1628864 . + 0 ID=cds-WP_004180553.1;Parent=gene-LI478_RS07900;Dbxref=Genbank:WP_004180553.1;Name=WP_004180553.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227898.1;locus_tag=LI478_RS07900;product=ABC transporter substrate-binding protein;protein_id=WP_004180553.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1628861 1629898 . + . ID=gene-LI478_RS07905;Name=LI478_RS07905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS07905 NZ_CP085478.1 Protein Homology CDS 1628861 1629898 . + 0 ID=cds-WP_004149062.1;Parent=gene-LI478_RS07905;Dbxref=Genbank:WP_004149062.1;Name=WP_004149062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227897.1;locus_tag=LI478_RS07905;product=ABC transporter permease;protein_id=WP_004149062.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1629895 1630800 . + . ID=gene-LI478_RS07910;Name=LI478_RS07910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS07910 NZ_CP085478.1 Protein Homology CDS 1629895 1630800 . + 0 ID=cds-WP_004200464.1;Parent=gene-LI478_RS07910;Dbxref=Genbank:WP_004200464.1;Name=WP_004200464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227896.1;locus_tag=LI478_RS07910;product=ABC transporter permease;protein_id=WP_004200464.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1630772 1631635 . + . ID=gene-LI478_RS07915;Name=LI478_RS07915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS07915 NZ_CP085478.1 Protein Homology CDS 1630772 1631635 . + 0 ID=cds-WP_004180551.1;Parent=gene-LI478_RS07915;Dbxref=Genbank:WP_004180551.1;Name=WP_004180551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227895.1;locus_tag=LI478_RS07915;product=ABC transporter ATP-binding protein;protein_id=WP_004180551.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1631646 1632419 . + . ID=gene-LI478_RS07920;Name=LI478_RS07920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS07920 NZ_CP085478.1 Protein Homology CDS 1631646 1632419 . + 0 ID=cds-WP_004899467.1;Parent=gene-LI478_RS07920;Dbxref=Genbank:WP_004899467.1;Name=WP_004899467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227894.1;locus_tag=LI478_RS07920;product=ABC transporter ATP-binding protein;protein_id=WP_004899467.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1632662 1633558 . - . ID=gene-LI478_RS07925;Name=yegS;gbkey=Gene;gene=yegS;gene_biotype=protein_coding;locus_tag=LI478_RS07925 NZ_CP085478.1 Protein Homology CDS 1632662 1633558 . - 0 ID=cds-WP_004151134.1;Parent=gene-LI478_RS07925;Dbxref=Genbank:WP_004151134.1;Name=WP_004151134.1;Ontology_term=GO:0001727,GO:0046872;gbkey=CDS;gene=yegS;go_function=lipid kinase activity|0001727||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227893.1;locus_tag=LI478_RS07925;product=lipid kinase YegS;protein_id=WP_004151134.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1633801 1635162 . - . ID=gene-LI478_RS07930;Name=yegQ;gbkey=Gene;gene=yegQ;gene_biotype=protein_coding;locus_tag=LI478_RS07930 NZ_CP085478.1 Protein Homology CDS 1633801 1635162 . - 0 ID=cds-WP_004144192.1;Parent=gene-LI478_RS07930;Dbxref=Genbank:WP_004144192.1;Name=WP_004144192.1;gbkey=CDS;gene=yegQ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227892.1;locus_tag=LI478_RS07930;product=tRNA 5-hydroxyuridine modification protein YegQ;protein_id=WP_004144192.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1635481 1636203 . - . ID=gene-LI478_RS07935;Name=baeR;gbkey=Gene;gene=baeR;gene_biotype=protein_coding;locus_tag=LI478_RS07935 NZ_CP085478.1 Protein Homology CDS 1635481 1636203 . - 0 ID=cds-WP_004175198.1;Parent=gene-LI478_RS07935;Dbxref=Genbank:WP_004175198.1;Name=WP_004175198.1;Ontology_term=GO:0000160,GO:0003677;gbkey=CDS;gene=baeR;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227891.1;locus_tag=LI478_RS07935;product=two-component system response regulator BaeR;protein_id=WP_004175198.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1636200 1637678 . - . ID=gene-LI478_RS07940;Name=baeS;gbkey=Gene;gene=baeS;gene_biotype=protein_coding;locus_tag=LI478_RS07940 NZ_CP085478.1 Protein Homology CDS 1636200 1637678 . - 0 ID=cds-WP_032412692.1;Parent=gene-LI478_RS07940;Dbxref=Genbank:WP_032412692.1;Name=WP_032412692.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=baeS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227890.1;locus_tag=LI478_RS07940;product=two-component system sensor histidine kinase BaeS;protein_id=WP_032412692.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1637675 1639090 . - . ID=gene-LI478_RS07945;Name=LI478_RS07945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS07945 NZ_CP085478.1 Protein Homology CDS 1637675 1639090 . - 0 ID=cds-WP_004151136.1;Parent=gene-LI478_RS07945;Dbxref=Genbank:WP_004151136.1;Name=WP_004151136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227889.1;locus_tag=LI478_RS07945;product=MFS transporter;protein_id=WP_004151136.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1639092 1642169 . - . ID=gene-LI478_RS07950;Name=mdtC;gbkey=Gene;gene=mdtC;gene_biotype=protein_coding;locus_tag=LI478_RS07950 NZ_CP085478.1 Protein Homology CDS 1639092 1642169 . - 0 ID=cds-WP_064153694.1;Parent=gene-LI478_RS07950;Dbxref=Genbank:WP_064153694.1;Name=WP_064153694.1;Ontology_term=GO:0055085;gbkey=CDS;gene=mdtC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227888.1;locus_tag=LI478_RS07950;product=multidrug efflux RND transporter permease subunit MdtC;protein_id=WP_064153694.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1642170 1645292 . - . ID=gene-LI478_RS07955;Name=LI478_RS07955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS07955 NZ_CP085478.1 Protein Homology CDS 1642170 1645292 . - 0 ID=cds-WP_064153695.1;Parent=gene-LI478_RS07955;Dbxref=Genbank:WP_064153695.1;Name=WP_064153695.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227887.1;locus_tag=LI478_RS07955;product=MdtB/MuxB family multidrug efflux RND transporter permease subunit;protein_id=WP_064153695.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1645292 1646530 . - . ID=gene-LI478_RS07960;Name=LI478_RS07960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS07960 NZ_CP085478.1 Protein Homology CDS 1645292 1646530 . - 0 ID=cds-WP_032415233.1;Parent=gene-LI478_RS07960;Dbxref=Genbank:WP_032415233.1;Name=WP_032415233.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227886.1;locus_tag=LI478_RS07960;product=MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit;protein_id=WP_032415233.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1646873 1648105 . + . ID=gene-LI478_RS07965;Name=LI478_RS07965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS07965 NZ_CP085478.1 Protein Homology CDS 1646873 1648105 . + 0 ID=cds-WP_004233249.1;Parent=gene-LI478_RS07965;Dbxref=Genbank:WP_004233249.1;Name=WP_004233249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227885.1;locus_tag=LI478_RS07965;product=dicarboxylate/amino acid:cation symporter;protein_id=WP_004233249.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1648379 1648990 . - . ID=gene-LI478_RS07970;Name=LI478_RS07970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS07970 NZ_CP085478.1 Protein Homology CDS 1648379 1648990 . - 0 ID=cds-WP_004899454.1;Parent=gene-LI478_RS07970;Dbxref=Genbank:WP_004899454.1;Name=WP_004899454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227884.1;locus_tag=LI478_RS07970;product=response regulator transcription factor;protein_id=WP_004899454.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1649134 1649214 . - . ID=gene-LI478_RS26450;Name=LI478_RS26450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS26450 NZ_CP085478.1 Protein Homology CDS 1649134 1649214 . - 0 ID=cds-WP_228761491.1;Parent=gene-LI478_RS26450;Dbxref=Genbank:WP_228761491.1;Name=WP_228761491.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033853.2;locus_tag=LI478_RS26450;product=hypothetical protein;protein_id=WP_228761491.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1649484 1650185 . - . ID=gene-LI478_RS07980;Name=LI478_RS07980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS07980 NZ_CP085478.1 Protein Homology CDS 1649484 1650185 . - 0 ID=cds-WP_004899452.1;Parent=gene-LI478_RS07980;Dbxref=Genbank:WP_004899452.1;Name=WP_004899452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227882.1;locus_tag=LI478_RS07980;product=response regulator transcription factor;protein_id=WP_004899452.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1650200 1652056 . - . ID=gene-LI478_RS07985;Name=LI478_RS07985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS07985 NZ_CP085478.1 Protein Homology CDS 1650200 1652056 . - 0 ID=cds-WP_032438779.1;Parent=gene-LI478_RS07985;Dbxref=Genbank:WP_032438779.1;Name=WP_032438779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227881.1;locus_tag=LI478_RS07985;product=sensor histidine kinase;protein_id=WP_032438779.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1652346 1653698 . - . ID=gene-LI478_RS07990;Name=yegD;gbkey=Gene;gene=yegD;gene_biotype=protein_coding;locus_tag=LI478_RS07990 NZ_CP085478.1 Protein Homology CDS 1652346 1653698 . - 0 ID=cds-WP_048332203.1;Parent=gene-LI478_RS07990;Dbxref=Genbank:WP_048332203.1;Name=WP_048332203.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;gene=yegD;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461070.1;locus_tag=LI478_RS07990;product=molecular chaperone;protein_id=WP_048332203.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1653836 1654684 . + . ID=gene-LI478_RS07995;Name=alkA;gbkey=Gene;gene=alkA;gene_biotype=protein_coding;locus_tag=LI478_RS07995 NZ_CP085478.1 Protein Homology CDS 1653836 1654684 . + 0 ID=cds-WP_023301766.1;Parent=gene-LI478_RS07995;Dbxref=Genbank:WP_023301766.1;Name=WP_023301766.1;Ontology_term=GO:0006281,GO:0003824;gbkey=CDS;gene=alkA;go_function=catalytic activity|0003824||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227879.1;locus_tag=LI478_RS07995;product=DNA-3-methyladenine glycosylase 2;protein_id=WP_023301766.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1654799 1655440 . + . ID=gene-LI478_RS08000;Name=udk;gbkey=Gene;gene=udk;gene_biotype=protein_coding;locus_tag=LI478_RS08000 NZ_CP085478.1 Protein Homology CDS 1654799 1655440 . + 0 ID=cds-WP_002912442.1;Parent=gene-LI478_RS08000;Dbxref=Genbank:WP_002912442.1;Name=WP_002912442.1;Ontology_term=GO:0004849;gbkey=CDS;gene=udk;go_function=uridine kinase activity|0004849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211872.1;locus_tag=LI478_RS08000;product=uridine kinase;protein_id=WP_002912442.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1655531 1656112 . + . ID=gene-LI478_RS08005;Name=dcd;gbkey=Gene;gene=dcd;gene_biotype=protein_coding;locus_tag=LI478_RS08005 NZ_CP085478.1 Protein Homology CDS 1655531 1656112 . + 0 ID=cds-WP_004151145.1;Parent=gene-LI478_RS08005;Dbxref=Genbank:WP_004151145.1;Name=WP_004151145.1;Ontology_term=GO:0009394,GO:0008829;gbkey=CDS;gene=dcd;go_function=dCTP deaminase activity|0008829||IEA;go_process=2'-deoxyribonucleotide metabolic process|0009394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004942378.1;locus_tag=LI478_RS08005;product=dCTP deaminase;protein_id=WP_004151145.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1656143 1657990 . + . ID=gene-LI478_RS08010;Name=asmA;gbkey=Gene;gene=asmA;gene_biotype=protein_coding;locus_tag=LI478_RS08010 NZ_CP085478.1 Protein Homology CDS 1656143 1657990 . + 0 ID=cds-WP_004180531.1;Parent=gene-LI478_RS08010;Dbxref=Genbank:WP_004180531.1;Name=WP_004180531.1;gbkey=CDS;gene=asmA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002912440.1;locus_tag=LI478_RS08010;product=outer membrane assembly protein AsmA;protein_id=WP_004180531.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1658527 1660110 . - . ID=gene-LI478_RS08015;Name=LI478_RS08015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS08015 NZ_CP085478.1 Protein Homology CDS 1658527 1660110 . - 0 ID=cds-WP_064153717.1;Parent=gene-LI478_RS08015;Dbxref=Genbank:WP_064153717.1;Name=WP_064153717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227875.1;locus_tag=LI478_RS08015;product=TerC family protein;protein_id=WP_064153717.1;transl_table=11 NZ_CP085478.1 RefSeq pseudogene 1660870 1661797 . + . ID=gene-LI478_RS08020;Name=galF;gbkey=Gene;gene=galF;gene_biotype=pseudogene;locus_tag=LI478_RS08020;pseudo=true NZ_CP085478.1 Protein Homology CDS 1660870 1661797 . + 0 ID=cds-LI478_RS08020;Parent=gene-LI478_RS08020;Note=frameshifted%3B internal stop;Ontology_term=GO:0009225,GO:0030234;gbkey=CDS;gene=galF;go_function=enzyme regulator activity|0030234||IEA;go_process=nucleotide-sugar metabolic process|0009225||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227874.1;locus_tag=LI478_RS08020;product=GalU regulator GalF;pseudo=true;transl_table=11 NZ_CP085478.1 RefSeq gene 1662158 1662787 . + . ID=gene-LI478_RS08025;Name=LI478_RS08025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS08025 NZ_CP085478.1 Protein Homology CDS 1662158 1662787 . + 0 ID=cds-WP_020324300.1;Parent=gene-LI478_RS08025;Dbxref=Genbank:WP_020324300.1;Name=WP_020324300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227873.1;locus_tag=LI478_RS08025;product=phosphatase PAP2 family protein;protein_id=WP_020324300.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1663334 1663456 . - . ID=gene-LI478_RS08030;Name=LI478_RS08030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS08030 NZ_CP085478.1 Protein Homology CDS 1663334 1663456 . - 0 ID=cds-WP_020324291.1;Parent=gene-LI478_RS08030;Dbxref=Genbank:WP_020324291.1;Name=WP_020324291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227871.1;locus_tag=LI478_RS08030;product=hypothetical protein;protein_id=WP_020324291.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1663747 1665186 . + . ID=gene-LI478_RS08035;Name=LI478_RS08035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS08035 NZ_CP085478.1 Protein Homology CDS 1663747 1665186 . + 0 ID=cds-WP_064153716.1;Parent=gene-LI478_RS08035;Dbxref=Genbank:WP_064153716.1;Name=WP_064153716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227870.1;locus_tag=LI478_RS08035;product=capsule assembly Wzi family protein;protein_id=WP_064153716.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1665332 1666465 . + . ID=gene-LI478_RS08040;Name=LI478_RS08040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS08040 NZ_CP085478.1 Protein Homology CDS 1665332 1666465 . + 0 ID=cds-WP_049206078.1;Parent=gene-LI478_RS08040;Dbxref=Genbank:WP_049206078.1;Name=WP_049206078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001775085.1;locus_tag=LI478_RS08040;product=polysaccharide export protein;protein_id=WP_049206078.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1666471 1666905 . + . ID=gene-LI478_RS08045;Name=LI478_RS08045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS08045 NZ_CP085478.1 Protein Homology CDS 1666471 1666905 . + 0 ID=cds-WP_024177910.1;Parent=gene-LI478_RS08045;Dbxref=Genbank:WP_024177910.1;Name=WP_024177910.1;Note=Wzb shows phosphatase activity towards the autophosphorylated Wzc protein%2C which induces colanic acid biosynthesis%3B catalyzes the phosphorylation of UDP-glucose dehydrogenase%2C an enzyme involved in colanic acid biosynthesis;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019704361.1;locus_tag=LI478_RS08045;product=protein-tyrosine-phosphatase;protein_id=WP_024177910.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1666922 1669084 . + . ID=gene-LI478_RS08050;Name=LI478_RS08050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS08050 NZ_CP085478.1 Protein Homology CDS 1666922 1669084 . + 0 ID=cds-WP_102007300.1;Parent=gene-LI478_RS08050;Dbxref=Genbank:WP_102007300.1;Name=WP_102007300.1;Ontology_term=GO:0045226;gbkey=CDS;go_process=extracellular polysaccharide biosynthetic process|0045226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000255406.1;locus_tag=LI478_RS08050;product=polysaccharide biosynthesis tyrosine autokinase;protein_id=WP_102007300.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1669157 1670587 . + . ID=gene-LI478_RS08055;Name=wbaP;gbkey=Gene;gene=wbaP;gene_biotype=protein_coding;locus_tag=LI478_RS08055 NZ_CP085478.1 Protein Homology CDS 1669157 1670587 . + 0 ID=cds-WP_032411481.1;Parent=gene-LI478_RS08055;Dbxref=Genbank:WP_032411481.1;Name=WP_032411481.1;Ontology_term=GO:0000271,GO:0016740,GO:0016020;gbkey=CDS;gene=wbaP;go_component=membrane|0016020||IEA;go_function=transferase activity|0016740||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227867.1;locus_tag=LI478_RS08055;product=undecaprenyl-phosphate galactose phosphotransferase WbaP;protein_id=WP_032411481.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1670611 1672074 . + . ID=gene-LI478_RS08060;Name=LI478_RS08060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS08060 NZ_CP085478.1 Protein Homology CDS 1670611 1672074 . + 0 ID=cds-WP_032411479.1;Parent=gene-LI478_RS08060;Dbxref=Genbank:WP_032411479.1;Name=WP_032411479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001067107.1;locus_tag=LI478_RS08060;product=lipopolysaccharide biosynthesis protein;protein_id=WP_032411479.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1672067 1673197 . + . ID=gene-LI478_RS08065;Name=LI478_RS08065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS08065 NZ_CP085478.1 Protein Homology CDS 1672067 1673197 . + 0 ID=cds-WP_021514687.1;Parent=gene-LI478_RS08065;Dbxref=Genbank:WP_021514687.1;Name=WP_021514687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004852467.1;locus_tag=LI478_RS08065;product=glycosyltransferase family 4 protein;protein_id=WP_021514687.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1673206 1674300 . + . ID=gene-LI478_RS08070;Name=LI478_RS08070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS08070 NZ_CP085478.1 Protein Homology CDS 1673206 1674300 . + 0 ID=cds-WP_064114617.1;Parent=gene-LI478_RS08070;Dbxref=Genbank:WP_064114617.1;Name=WP_064114617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016809207.1;locus_tag=LI478_RS08070;product=glycosyltransferase;protein_id=WP_064114617.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1674315 1675493 . + . ID=gene-LI478_RS08075;Name=LI478_RS08075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS08075 NZ_CP085478.1 Protein Homology CDS 1674315 1675493 . + 0 ID=cds-WP_064153714.1;Parent=gene-LI478_RS08075;Dbxref=Genbank:WP_064153714.1;Name=WP_064153714.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016800.2;locus_tag=LI478_RS08075;product=O-antigen ligase family protein;protein_id=WP_064153714.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1675513 1676787 . + . ID=gene-LI478_RS08080;Name=LI478_RS08080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS08080 NZ_CP085478.1 Protein Homology CDS 1675513 1676787 . + 0 ID=cds-WP_021514684.1;Parent=gene-LI478_RS08080;Dbxref=Genbank:WP_021514684.1;Name=WP_021514684.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001206288.1;locus_tag=LI478_RS08080;product=glycosyl hydrolase family 28-related protein;protein_id=WP_021514684.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1676808 1677314 . + . ID=gene-LI478_RS08085;Name=LI478_RS08085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS08085 NZ_CP085478.1 Protein Homology CDS 1676808 1677314 . + 0 ID=cds-WP_102007298.1;Parent=gene-LI478_RS08085;Dbxref=Genbank:WP_102007298.1;Name=WP_102007298.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: protein motif:HMM:NF013884.2;locus_tag=LI478_RS08085;product=acyltransferase family protein;protein_id=WP_102007298.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1677332 1678300 . + . ID=gene-LI478_RS08090;Name=LI478_RS08090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS08090 NZ_CP085478.1 Protein Homology CDS 1677332 1678300 . + 0 ID=cds-WP_004225014.1-3;Parent=gene-LI478_RS08090;Dbxref=Genbank:WP_004225014.1;Name=WP_004225014.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=LI478_RS08090;product=IS5 family transposase;protein_id=WP_004225014.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1678967 1680118 . + . ID=gene-LI478_RS08095;Name=LI478_RS08095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS08095 NZ_CP085478.1 Protein Homology CDS 1678967 1680118 . + 0 ID=cds-WP_032411474.1;Parent=gene-LI478_RS08095;Dbxref=Genbank:WP_032411474.1;Name=WP_032411474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001157007.1;locus_tag=LI478_RS08095;product=glycosyltransferase family 4 protein;protein_id=WP_032411474.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1680264 1681670 . + . ID=gene-LI478_RS08100;Name=gndA;gbkey=Gene;gene=gndA;gene_biotype=protein_coding;locus_tag=LI478_RS08100 NZ_CP085478.1 Protein Homology CDS 1680264 1681670 . + 0 ID=cds-WP_032411472.1;Parent=gene-LI478_RS08100;Dbxref=Genbank:WP_032411472.1;Name=WP_032411472.1;Ontology_term=GO:0006098,GO:0004616,GO:0050661;gbkey=CDS;gene=gndA;go_function=phosphogluconate dehydrogenase (decarboxylating) activity|0004616||IEA,NADP binding|0050661||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227859.1;locus_tag=LI478_RS08100;product=NADP-dependent phosphogluconate dehydrogenase;protein_id=WP_032411472.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1681896 1683311 . + . ID=gene-LI478_RS08105;Name=LI478_RS08105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS08105 NZ_CP085478.1 Protein Homology CDS 1681896 1683311 . + 0 ID=cds-WP_004180506.1;Parent=gene-LI478_RS08105;Dbxref=Genbank:WP_004180506.1;Name=WP_004180506.1;Ontology_term=GO:0009103,GO:0004476;gbkey=CDS;go_function=mannose-6-phosphate isomerase activity|0004476||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019725197.1;locus_tag=LI478_RS08105;product=mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase;protein_id=WP_004180506.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1683334 1684704 . + . ID=gene-LI478_RS08110;Name=rfbK1;gbkey=Gene;gene=rfbK1;gene_biotype=protein_coding;locus_tag=LI478_RS08110 NZ_CP085478.1 Protein Homology CDS 1683334 1684704 . + 0 ID=cds-WP_073557652.1;Parent=gene-LI478_RS08110;Dbxref=Genbank:WP_073557652.1;Name=WP_073557652.1;gbkey=CDS;gene=rfbK1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032248255.1;locus_tag=LI478_RS08110;product=O9 family phosphomannomutase RfbK1;protein_id=WP_073557652.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1684868 1686034 . + . ID=gene-LI478_RS08115;Name=ugd;gbkey=Gene;gene=ugd;gene_biotype=protein_coding;locus_tag=LI478_RS08115 NZ_CP085478.1 Protein Homology CDS 1684868 1686034 . + 0 ID=cds-WP_032411469.1;Parent=gene-LI478_RS08115;Dbxref=Genbank:WP_032411469.1;Name=WP_032411469.1;Ontology_term=GO:0000271,GO:0003979;gbkey=CDS;gene=ugd;go_function=UDP-glucose 6-dehydrogenase activity|0003979||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227854.1;locus_tag=LI478_RS08115;product=UDP-glucose 6-dehydrogenase;protein_id=WP_032411469.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1686227 1687234 . + . ID=gene-LI478_RS08120;Name=LI478_RS08120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS08120 NZ_CP085478.1 Protein Homology CDS 1686227 1687234 . + 0 ID=cds-WP_031589100.1;Parent=gene-LI478_RS08120;Dbxref=Genbank:WP_031589100.1;Name=WP_031589100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004144152.1;locus_tag=LI478_RS08120;product=NAD-dependent epimerase;protein_id=WP_031589100.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1687803 1687925 . - . ID=gene-LI478_RS08125;Name=LI478_RS08125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS08125 NZ_CP085478.1 Protein Homology CDS 1687803 1687925 . - 0 ID=cds-WP_004144151.1;Parent=gene-LI478_RS08125;Dbxref=Genbank:WP_004144151.1;Name=WP_004144151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227853.1;locus_tag=LI478_RS08125;product=small membrane protein;protein_id=WP_004144151.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1689688 1691103 . + . ID=gene-LI478_RS08130;Name=LI478_RS08130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS08130 NZ_CP085478.1 Protein Homology CDS 1689688 1691103 . + 0 ID=cds-WP_004180506.1-2;Parent=gene-LI478_RS08130;Dbxref=Genbank:WP_004180506.1;Name=WP_004180506.1;Ontology_term=GO:0009103,GO:0004476;gbkey=CDS;go_function=mannose-6-phosphate isomerase activity|0004476||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019725197.1;locus_tag=LI478_RS08130;product=mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase;protein_id=WP_004180506.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1691126 1692508 . + . ID=gene-LI478_RS08135;Name=rfbK2;gbkey=Gene;gene=rfbK2;gene_biotype=protein_coding;locus_tag=LI478_RS08135 NZ_CP085478.1 Protein Homology CDS 1691126 1692508 . + 0 ID=cds-WP_064153713.1;Parent=gene-LI478_RS08135;Dbxref=Genbank:WP_064153713.1;Name=WP_064153713.1;gbkey=CDS;gene=rfbK2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_166649022.1;locus_tag=LI478_RS08135;product=O9 family phosphomannomutase RfbK2;protein_id=WP_064153713.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1692514 1693299 . + . ID=gene-LI478_RS08140;Name=wzm;gbkey=Gene;gene=wzm;gene_biotype=protein_coding;locus_tag=LI478_RS08140 NZ_CP085478.1 Protein Homology CDS 1692514 1693299 . + 0 ID=cds-WP_020956642.1;Parent=gene-LI478_RS08140;Dbxref=Genbank:WP_020956642.1;Name=WP_020956642.1;gbkey=CDS;gene=wzm;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001310941.1;locus_tag=LI478_RS08140;product=O9 family O-antigen export ABC transporter permease subunit;protein_id=WP_020956642.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1693302 1694597 . + . ID=gene-LI478_RS08145;Name=wzt;gbkey=Gene;gene=wzt;gene_biotype=protein_coding;locus_tag=LI478_RS08145 NZ_CP085478.1 Protein Homology CDS 1693302 1694597 . + 0 ID=cds-WP_023280326.1;Parent=gene-LI478_RS08145;Dbxref=Genbank:WP_023280326.1;Name=WP_023280326.1;gbkey=CDS;gene=wzt;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000025034.1;locus_tag=LI478_RS08145;product=O9 family O-antigen export ABC transporter ATP-binding subunit;protein_id=WP_023280326.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1694618 1696675 . + . ID=gene-LI478_RS08150;Name=LI478_RS08150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS08150 NZ_CP085478.1 Protein Homology CDS 1694618 1696675 . + 0 ID=cds-WP_032441066.1;Parent=gene-LI478_RS08150;Dbxref=Genbank:WP_032441066.1;Name=WP_032441066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004103664.1;locus_tag=LI478_RS08150;product=methyltransferase domain-containing protein;protein_id=WP_032441066.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1696686 1699208 . + . ID=gene-LI478_RS08155;Name=LI478_RS08155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS08155 NZ_CP085478.1 Protein Homology CDS 1696686 1699208 . + 0 ID=cds-WP_064153712.1;Parent=gene-LI478_RS08155;Dbxref=Genbank:WP_064153712.1;Name=WP_064153712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_105458066.1;locus_tag=LI478_RS08155;product=glycosyltransferase family 1 protein;protein_id=WP_064153712.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1699255 1700400 . + . ID=gene-LI478_RS08160;Name=LI478_RS08160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS08160 NZ_CP085478.1 Protein Homology CDS 1699255 1700400 . + 0 ID=cds-WP_004203596.1;Parent=gene-LI478_RS08160;Dbxref=Genbank:WP_004203596.1;Name=WP_004203596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016809192.1;locus_tag=LI478_RS08160;product=glycosyltransferase family 1 protein;protein_id=WP_004203596.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1700410 1701525 . + . ID=gene-LI478_RS08165;Name=wbdC;gbkey=Gene;gene=wbdC;gene_biotype=protein_coding;locus_tag=LI478_RS08165 NZ_CP085478.1 Protein Homology CDS 1700410 1701525 . + 0 ID=cds-WP_004184789.1;Parent=gene-LI478_RS08165;Dbxref=Genbank:WP_004184789.1;Name=WP_004184789.1;gbkey=CDS;gene=wbdC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004184789.1;locus_tag=LI478_RS08165;product=N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans%2Coctacis-undecaprenol 3-alpha-mannosyltransferase WbdC;protein_id=WP_004184789.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1701564 1702160 . - . ID=gene-LI478_RS08170;Name=hisIE;gbkey=Gene;gene=hisIE;gene_biotype=protein_coding;locus_tag=LI478_RS08170 NZ_CP085478.1 Protein Homology CDS 1701564 1702160 . - 0 ID=cds-WP_004184787.1;Parent=gene-LI478_RS08170;Dbxref=Genbank:WP_004184787.1;Name=WP_004184787.1;Ontology_term=GO:0000105,GO:0004635,GO:0004636;gbkey=CDS;gene=hisIE;go_function=phosphoribosyl-AMP cyclohydrolase activity|0004635||IEA,phosphoribosyl-ATP diphosphatase activity|0004636||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004203593.1;locus_tag=LI478_RS08170;product=bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE;protein_id=WP_004184787.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1702154 1702930 . - . ID=gene-LI478_RS08175;Name=hisF;gbkey=Gene;gene=hisF;gene_biotype=protein_coding;locus_tag=LI478_RS08175 NZ_CP085478.1 Protein Homology CDS 1702154 1702930 . - 0 ID=cds-WP_004180497.1;Parent=gene-LI478_RS08175;Dbxref=Genbank:WP_004180497.1;Name=WP_004180497.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisF;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227842.1;locus_tag=LI478_RS08175;product=imidazole glycerol phosphate synthase subunit HisF;protein_id=WP_004180497.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1702912 1703649 . - . ID=gene-LI478_RS08180;Name=hisA;gbkey=Gene;gene=hisA;gene_biotype=protein_coding;locus_tag=LI478_RS08180 NZ_CP085478.1 Protein Homology CDS 1702912 1703649 . - 0 ID=cds-WP_048332913.1;Parent=gene-LI478_RS08180;Dbxref=Genbank:WP_048332913.1;Name=WP_048332913.1;Ontology_term=GO:0000105,GO:0003949;gbkey=CDS;gene=hisA;go_function=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity|0003949||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227841.1;locus_tag=LI478_RS08180;product=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase;protein_id=WP_048332913.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1703649 1704239 . - . ID=gene-LI478_RS08185;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;locus_tag=LI478_RS08185 NZ_CP085478.1 Protein Homology CDS 1703649 1704239 . - 0 ID=cds-WP_002912227.1;Parent=gene-LI478_RS08185;Dbxref=Genbank:WP_002912227.1;Name=WP_002912227.1;Ontology_term=GO:0000105,GO:0000107,GO:0016884;gbkey=CDS;gene=hisH;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA,carbon-nitrogen ligase activity%2C with glutamine as amido-N-donor|0016884||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128083.1;locus_tag=LI478_RS08185;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=WP_002912227.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1704239 1705306 . - . ID=gene-LI478_RS08190;Name=hisB;gbkey=Gene;gene=hisB;gene_biotype=protein_coding;locus_tag=LI478_RS08190 NZ_CP085478.1 Protein Homology CDS 1704239 1705306 . - 0 ID=cds-WP_040188824.1;Parent=gene-LI478_RS08190;Dbxref=Genbank:WP_040188824.1;Name=WP_040188824.1;Ontology_term=GO:0000105,GO:0004401,GO:0004424;gbkey=CDS;gene=hisB;go_function=histidinol-phosphatase activity|0004401||IEA,imidazoleglycerol-phosphate dehydratase activity|0004424||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227839.1;locus_tag=LI478_RS08190;product=bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB;protein_id=WP_040188824.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1705303 1706364 . - . ID=gene-LI478_RS08195;Name=hisC;gbkey=Gene;gene=hisC;gene_biotype=protein_coding;locus_tag=LI478_RS08195 NZ_CP085478.1 Protein Homology CDS 1705303 1706364 . - 0 ID=cds-WP_004149000.1;Parent=gene-LI478_RS08195;Dbxref=Genbank:WP_004149000.1;Name=WP_004149000.1;Ontology_term=GO:0000105,GO:0004400;gbkey=CDS;gene=hisC;go_function=histidinol-phosphate transaminase activity|0004400||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227838.1;locus_tag=LI478_RS08195;product=histidinol-phosphate transaminase;protein_id=WP_004149000.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1706361 1707665 . - . ID=gene-LI478_RS08200;Name=hisD;gbkey=Gene;gene=hisD;gene_biotype=protein_coding;locus_tag=LI478_RS08200 NZ_CP085478.1 Protein Homology CDS 1706361 1707665 . - 0 ID=cds-WP_004148999.1;Parent=gene-LI478_RS08200;Dbxref=Genbank:WP_004148999.1;Name=WP_004148999.1;Ontology_term=GO:0000105,GO:0004399;gbkey=CDS;gene=hisD;go_function=histidinol dehydrogenase activity|0004399||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227837.1;locus_tag=LI478_RS08200;product=histidinol dehydrogenase;protein_id=WP_004148999.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1707705 1708604 . - . ID=gene-LI478_RS08205;Name=hisG;gbkey=Gene;gene=hisG;gene_biotype=protein_coding;locus_tag=LI478_RS08205 NZ_CP085478.1 Protein Homology CDS 1707705 1708604 . - 0 ID=cds-WP_002912152.1;Parent=gene-LI478_RS08205;Dbxref=Genbank:WP_002912152.1;Name=WP_002912152.1;Ontology_term=GO:0000105,GO:0003879;gbkey=CDS;gene=hisG;go_function=ATP phosphoribosyltransferase activity|0003879||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128078.1;locus_tag=LI478_RS08205;product=ATP phosphoribosyltransferase;protein_id=WP_002912152.1;transl_table=11 NZ_CP085478.1 cmsearch sequence_feature 1708652 1708774 . - . ID=id-NZ_CP085478.1:1708652..1708774;Dbxref=RFAM:RF00514;Note=His leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1 NZ_CP085478.1 RefSeq gene 1708750 1708800 . - . ID=gene-LI478_RS08210;Name=hisL;gbkey=Gene;gene=hisL;gene_biotype=protein_coding;locus_tag=LI478_RS08210 NZ_CP085478.1 Protein Homology CDS 1708750 1708800 . - 0 ID=cds-WP_004899375.1;Parent=gene-LI478_RS08210;Dbxref=Genbank:WP_004899375.1;Name=WP_004899375.1;Ontology_term=GO:0000105;gbkey=CDS;gene=hisL;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416522.1;locus_tag=LI478_RS08210;product=his operon leader peptide;protein_id=WP_004899375.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1708977 1709801 . + . ID=gene-LI478_RS08215;Name=LI478_RS08215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS08215 NZ_CP085478.1 Protein Homology CDS 1708977 1709801 . + 0 ID=cds-WP_004152513.1;Parent=gene-LI478_RS08215;Dbxref=Genbank:WP_004152513.1;Name=WP_004152513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227835.1;locus_tag=LI478_RS08215;product=SDR family oxidoreductase;protein_id=WP_004152513.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1709840 1710730 . + . ID=gene-LI478_RS08220;Name=LI478_RS08220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS08220 NZ_CP085478.1 Protein Homology CDS 1709840 1710730 . + 0 ID=cds-WP_004189172.1;Parent=gene-LI478_RS08220;Dbxref=Genbank:WP_004189172.1;Name=WP_004189172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227834.1;locus_tag=LI478_RS08220;product=LysR family transcriptional regulator;protein_id=WP_004189172.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1711019 1712377 . + . ID=gene-LI478_RS08230;Name=plaP;gbkey=Gene;gene=plaP;gene_biotype=protein_coding;locus_tag=LI478_RS08230 NZ_CP085478.1 Protein Homology CDS 1711019 1712377 . + 0 ID=cds-WP_004148994.1;Parent=gene-LI478_RS08230;Dbxref=Genbank:WP_004148994.1;Name=WP_004148994.1;gbkey=CDS;gene=plaP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227833.1;locus_tag=LI478_RS08230;product=putrescine/proton symporter PlaP;protein_id=WP_004148994.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1712559 1712870 . - . ID=gene-LI478_RS08235;Name=LI478_RS08235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS08235 NZ_CP085478.1 Protein Homology CDS 1712559 1712870 . - 0 ID=cds-WP_002912109.1;Parent=gene-LI478_RS08235;Dbxref=Genbank:WP_002912109.1;Name=WP_002912109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227832.1;locus_tag=LI478_RS08235;product=helix-turn-helix domain-containing protein;protein_id=WP_002912109.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1713109 1715211 . + . ID=gene-LI478_RS08240;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=LI478_RS08240 NZ_CP085478.1 Protein Homology CDS 1713109 1715211 . + 0 ID=cds-WP_004899365.1;Parent=gene-LI478_RS08240;Dbxref=Genbank:WP_004899365.1;Name=WP_004899365.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227831.1;locus_tag=LI478_RS08240;product=elongation factor G;protein_id=WP_004899365.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1715395 1716758 . + . ID=gene-LI478_RS08245;Name=LI478_RS08245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS08245 NZ_CP085478.1 Protein Homology CDS 1715395 1715863 . + 0 ID=cds-WP_085955203.1-3;Parent=gene-LI478_RS08245;Dbxref=Genbank:WP_085955203.1;Name=WP_085955203.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611151.1;locus_tag=LI478_RS08245;product=IS3-like element ISKpn1 family transposase;protein_id=WP_085955203.1;transl_table=11 NZ_CP085478.1 Protein Homology CDS 1715863 1716758 . + 2 ID=cds-WP_085955203.1-3;Parent=gene-LI478_RS08245;Dbxref=Genbank:WP_085955203.1;Name=WP_085955203.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611151.1;locus_tag=LI478_RS08245;product=IS3-like element ISKpn1 family transposase;protein_id=WP_085955203.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1716883 1718307 . - . ID=gene-LI478_RS08250;Name=sbcB;gbkey=Gene;gene=sbcB;gene_biotype=protein_coding;locus_tag=LI478_RS08250 NZ_CP085478.1 Protein Homology CDS 1716883 1718307 . - 0 ID=cds-WP_023282815.1;Parent=gene-LI478_RS08250;Dbxref=Genbank:WP_023282815.1;Name=WP_023282815.1;Ontology_term=GO:0006281,GO:0000175,GO:0003676,GO:0008852;gbkey=CDS;gene=sbcB;go_function=3'-5'-exoribonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA,exodeoxyribonuclease I activity|0008852||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227830.1;locus_tag=LI478_RS08250;product=exodeoxyribonuclease I;protein_id=WP_023282815.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1718488 1719651 . + . ID=gene-LI478_RS08255;Name=dacD;gbkey=Gene;gene=dacD;gene_biotype=protein_coding;locus_tag=LI478_RS08255 NZ_CP085478.1 Protein Homology CDS 1718488 1719651 . + 0 ID=cds-WP_004153104.1;Parent=gene-LI478_RS08255;Dbxref=Genbank:WP_004153104.1;Name=WP_004153104.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=dacD;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004153104.1;locus_tag=LI478_RS08255;product=serine-type D-Ala-D-Ala carboxypeptidase DacD;protein_id=WP_004153104.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1719828 1720301 . + . ID=gene-LI478_RS08260;Name=sbmC;gbkey=Gene;gene=sbmC;gene_biotype=protein_coding;locus_tag=LI478_RS08260 NZ_CP085478.1 Protein Homology CDS 1719828 1720301 . + 0 ID=cds-WP_064153331.1;Parent=gene-LI478_RS08260;Dbxref=Genbank:WP_064153331.1;Name=WP_064153331.1;gbkey=CDS;gene=sbmC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227827.1;locus_tag=LI478_RS08260;product=DNA gyrase inhibitor SbmC;protein_id=WP_064153331.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1720400 1721458 . + . ID=gene-LI478_RS08265;Name=LI478_RS08265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS08265 NZ_CP085478.1 Protein Homology CDS 1720400 1721458 . + 0 ID=cds-WP_002911885.1;Parent=gene-LI478_RS08265;Dbxref=Genbank:WP_002911885.1;Name=WP_002911885.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227826.1;locus_tag=LI478_RS08265;product=FUSC family protein;protein_id=WP_002911885.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1721626 1721949 . + . ID=gene-LI478_RS08270;Name=LI478_RS08270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS08270 NZ_CP085478.1 Protein Homology CDS 1721626 1721949 . + 0 ID=cds-WP_002911883.1;Parent=gene-LI478_RS08270;Dbxref=Genbank:WP_002911883.1;Name=WP_002911883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002911883.1;locus_tag=LI478_RS08270;product=DUF496 family protein;protein_id=WP_002911883.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1722264 1723004 . + . ID=gene-LI478_RS08275;Name=cobS;gbkey=Gene;gene=cobS;gene_biotype=protein_coding;locus_tag=LI478_RS08275 NZ_CP085478.1 Protein Homology CDS 1722264 1723004 . + 0 ID=cds-WP_004180482.1;Parent=gene-LI478_RS08275;Dbxref=Genbank:WP_004180482.1;Name=WP_004180482.1;Ontology_term=GO:0009236,GO:0008818;gbkey=CDS;gene=cobS;go_function=cobalamin 5'-phosphate synthase activity|0008818||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227824.1;locus_tag=LI478_RS08275;product=adenosylcobinamide-GDP ribazoletransferase;protein_id=WP_004180482.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1723032 1724099 . + . ID=gene-LI478_RS08280;Name=cobT;gbkey=Gene;gene=cobT;gene_biotype=protein_coding;locus_tag=LI478_RS08280 NZ_CP085478.1 Protein Homology CDS 1723032 1724099 . + 0 ID=cds-WP_004175280.1;Parent=gene-LI478_RS08280;Dbxref=Genbank:WP_004175280.1;Name=WP_004175280.1;Ontology_term=GO:0009236,GO:0008939;gbkey=CDS;gene=cobT;go_function=nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity|0008939||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227823.1;locus_tag=LI478_RS08280;product=nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase;protein_id=WP_004175280.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1724142 1725251 . - . ID=gene-LI478_RS08285;Name=LI478_RS08285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS08285 NZ_CP085478.1 Protein Homology CDS 1724142 1725251 . - 0 ID=cds-WP_004200363.1;Parent=gene-LI478_RS08285;Dbxref=Genbank:WP_004200363.1;Name=WP_004200363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227822.1;locus_tag=LI478_RS08285;product=adenosylhomocysteinase;protein_id=WP_004200363.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1725450 1726181 . + . ID=gene-LI478_RS08290;Name=LI478_RS08290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS08290 NZ_CP085478.1 Protein Homology CDS 1725450 1726181 . + 0 ID=cds-WP_002911879.1;Parent=gene-LI478_RS08290;Dbxref=Genbank:WP_002911879.1;Name=WP_002911879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227821.1;locus_tag=LI478_RS08290;product=HPP family protein;protein_id=WP_002911879.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1726203 1726592 . - . ID=gene-LI478_RS08295;Name=LI478_RS08295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS08295 NZ_CP085478.1 Protein Homology CDS 1726203 1726592 . - 0 ID=cds-WP_038433168.1;Parent=gene-LI478_RS08295;Dbxref=Genbank:WP_038433168.1;Name=WP_038433168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227820.1;locus_tag=LI478_RS08295;product=tautomerase family protein;protein_id=WP_038433168.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1726708 1727664 . + . ID=gene-LI478_RS08300;Name=LI478_RS08300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS08300 NZ_CP085478.1 Protein Homology CDS 1726708 1727664 . + 0 ID=cds-WP_002911877.1;Parent=gene-LI478_RS08300;Dbxref=Genbank:WP_002911877.1;Name=WP_002911877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227819.1;locus_tag=LI478_RS08300;product=LysR family transcriptional regulator;protein_id=WP_002911877.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1727624 1728364 . - . ID=gene-LI478_RS08305;Name=LI478_RS08305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS08305 NZ_CP085478.1 Protein Homology CDS 1727624 1728364 . - 0 ID=cds-WP_032105075.1;Parent=gene-LI478_RS08305;Dbxref=Genbank:WP_032105075.1;Name=WP_032105075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227818.1;locus_tag=LI478_RS08305;product=lipoate--protein ligase A;protein_id=WP_032105075.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1728411 1729730 . - . ID=gene-LI478_RS08310;Name=shiA;gbkey=Gene;gene=shiA;gene_biotype=protein_coding;locus_tag=LI478_RS08310 NZ_CP085478.1 Protein Homology CDS 1728411 1729730 . - 0 ID=cds-WP_020317069.1;Parent=gene-LI478_RS08310;Dbxref=Genbank:WP_020317069.1;Name=WP_020317069.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=shiA;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227817.1;locus_tag=LI478_RS08310;product=shikimate transporter;protein_id=WP_020317069.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1730074 1730535 . + . ID=gene-LI478_RS08315;Name=LI478_RS08315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS08315 NZ_CP085478.1 Protein Homology CDS 1730074 1730535 . + 0 ID=cds-WP_014907250.1;Parent=gene-LI478_RS08315;Dbxref=Genbank:WP_014907250.1;Name=WP_014907250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227816.1;locus_tag=LI478_RS08315;product=molybdopterin-dependent oxidoreductase;protein_id=WP_014907250.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1730546 1732456 . + . ID=gene-LI478_RS08320;Name=LI478_RS08320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS08320 NZ_CP085478.1 Protein Homology CDS 1730546 1732456 . + 0 ID=cds-WP_016831855.1;Parent=gene-LI478_RS08320;Dbxref=Genbank:WP_016831855.1;Name=WP_016831855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227815.1;locus_tag=LI478_RS08320;product=EAL domain-containing protein;protein_id=WP_016831855.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1732453 1732581 . - . ID=gene-LI478_RS08325;Name=LI478_RS08325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS08325 NZ_CP085478.1 Protein Homology CDS 1732453 1732581 . - 0 ID=cds-WP_004144110.1;Parent=gene-LI478_RS08325;Dbxref=Genbank:WP_004144110.1;Name=WP_004144110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227814.1;locus_tag=LI478_RS08325;product=hypothetical protein;protein_id=WP_004144110.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1732679 1733011 . + . ID=gene-LI478_RS08330;Name=LI478_RS08330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS08330 NZ_CP085478.1 Protein Homology CDS 1732679 1733011 . + 0 ID=cds-WP_002911866.1;Parent=gene-LI478_RS08330;Dbxref=Genbank:WP_002911866.1;Name=WP_002911866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227813.1;locus_tag=LI478_RS08330;product=DUF1971 domain-containing protein;protein_id=WP_002911866.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1733018 1733353 . + . ID=gene-LI478_RS08335;Name=LI478_RS08335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS08335 NZ_CP085478.1 Protein Homology CDS 1733018 1733353 . + 0 ID=cds-WP_002911862.1;Parent=gene-LI478_RS08335;Dbxref=Genbank:WP_002911862.1;Name=WP_002911862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227812.1;locus_tag=LI478_RS08335;product=DUF1869 domain-containing protein;protein_id=WP_002911862.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1733359 1734273 . - . ID=gene-LI478_RS08340;Name=LI478_RS08340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS08340 NZ_CP085478.1 Protein Homology CDS 1733359 1734273 . - 0 ID=cds-WP_022631348.1;Parent=gene-LI478_RS08340;Dbxref=Genbank:WP_022631348.1;Name=WP_022631348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227811.1;locus_tag=LI478_RS08340;product=LysR substrate-binding domain-containing protein;protein_id=WP_022631348.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1734405 1734980 . + . ID=gene-LI478_RS08345;Name=LI478_RS08345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS08345 NZ_CP085478.1 Protein Homology CDS 1734405 1734980 . + 0 ID=cds-WP_032415202.1;Parent=gene-LI478_RS08345;Dbxref=Genbank:WP_032415202.1;Name=WP_032415202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227810.1;locus_tag=LI478_RS08345;product=hypothetical protein;protein_id=WP_032415202.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1735173 1736009 . + . ID=gene-LI478_RS08350;Name=LI478_RS08350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS08350 NZ_CP085478.1 Protein Homology CDS 1735173 1736009 . + 0 ID=cds-WP_004180471.1;Parent=gene-LI478_RS08350;Dbxref=Genbank:WP_004180471.1;Name=WP_004180471.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227809.1;locus_tag=LI478_RS08350;product=alpha/beta hydrolase;protein_id=WP_004180471.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1736216 1737187 . + . ID=gene-LI478_RS08355;Name=LI478_RS08355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS08355 NZ_CP085478.1 Protein Homology CDS 1736216 1737187 . + 0 ID=cds-WP_032415201.1;Parent=gene-LI478_RS08355;Dbxref=Genbank:WP_032415201.1;Name=WP_032415201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227808.1;locus_tag=LI478_RS08355;product=sensor domain-containing diguanylate cyclase;protein_id=WP_032415201.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1737184 1738287 . - . ID=gene-LI478_RS08360;Name=LI478_RS08360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS08360 NZ_CP085478.1 Protein Homology CDS 1737184 1738287 . - 0 ID=cds-WP_023280311.1;Parent=gene-LI478_RS08360;Dbxref=Genbank:WP_023280311.1;Name=WP_023280311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227807.1;locus_tag=LI478_RS08360;product=AarF/UbiB family protein;protein_id=WP_023280311.1;transl_table=11 NZ_CP085478.1 RefSeq pseudogene 1738441 1738515 . + . ID=gene-LI478_RS08365;Name=LI478_RS08365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS08365;partial=true;pseudo=true;start_range=.,1738441 NZ_CP085478.1 Protein Homology CDS 1738441 1738515 . + 0 ID=cds-LI478_RS08365;Parent=gene-LI478_RS08365;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016161430.1;locus_tag=LI478_RS08365;partial=true;product=type II toxin-antitoxin system PemK/MazF family toxin;pseudo=true;start_range=.,1738441;transl_table=11 NZ_CP085478.1 RefSeq gene 1738754 1739874 . - . ID=gene-LI478_RS08370;Name=LI478_RS08370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS08370 NZ_CP085478.1 Protein Homology CDS 1739616 1739874 . - 0 ID=cds-WP_085955508.1;Parent=gene-LI478_RS08370;Dbxref=Genbank:WP_085955508.1;Name=WP_085955508.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611474.1;locus_tag=LI478_RS08370;product=IS3 family transposase;protein_id=WP_085955508.1;transl_table=11 NZ_CP085478.1 Protein Homology CDS 1738754 1739616 . - 2 ID=cds-WP_085955508.1;Parent=gene-LI478_RS08370;Dbxref=Genbank:WP_085955508.1;Name=WP_085955508.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611474.1;locus_tag=LI478_RS08370;product=IS3 family transposase;protein_id=WP_085955508.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1740214 1741020 . - . ID=gene-LI478_RS08375;Name=LI478_RS08375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS08375 NZ_CP085478.1 Protein Homology CDS 1740214 1741020 . - 0 ID=cds-WP_004899307.1;Parent=gene-LI478_RS08375;Dbxref=Genbank:WP_004899307.1;Name=WP_004899307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004899307.1;locus_tag=LI478_RS08375;product=helix-turn-helix transcriptional regulator;protein_id=WP_004899307.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1741097 1743136 . + . ID=gene-LI478_RS08380;Name=LI478_RS08380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS08380 NZ_CP085478.1 Protein Homology CDS 1741097 1743136 . + 0 ID=cds-WP_016529980.1;Parent=gene-LI478_RS08380;Dbxref=Genbank:WP_016529980.1;Name=WP_016529980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016529980.1;locus_tag=LI478_RS08380;product=FUSC family protein;protein_id=WP_016529980.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1743126 1743341 . + . ID=gene-LI478_RS08385;Name=LI478_RS08385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS08385 NZ_CP085478.1 Protein Homology CDS 1743126 1743341 . + 0 ID=cds-WP_004899298.1;Parent=gene-LI478_RS08385;Dbxref=Genbank:WP_004899298.1;Name=WP_004899298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004899298.1;locus_tag=LI478_RS08385;product=DUF1656 domain-containing protein;protein_id=WP_004899298.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1743338 1744201 . + . ID=gene-LI478_RS08390;Name=LI478_RS08390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS08390 NZ_CP085478.1 Protein Homology CDS 1743338 1744201 . + 0 ID=cds-WP_004899294.1;Parent=gene-LI478_RS08390;Dbxref=Genbank:WP_004899294.1;Name=WP_004899294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004899294.1;locus_tag=LI478_RS08390;product=HlyD family secretion protein;protein_id=WP_004899294.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1744314 1744712 . + . ID=gene-LI478_RS08395;Name=LI478_RS08395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS08395 NZ_CP085478.1 Protein Homology CDS 1744314 1744712 . + 0 ID=cds-WP_004899290.1;Parent=gene-LI478_RS08395;Dbxref=Genbank:WP_004899290.1;Name=WP_004899290.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004899290.1;locus_tag=LI478_RS08395;product=helix-turn-helix domain-containing protein;protein_id=WP_004899290.1;transl_table=11 NZ_CP085478.1 RefSeq pseudogene 1744930 1746158 . - . ID=gene-LI478_RS08400;Name=LI478_RS08400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS08400;pseudo=true NZ_CP085478.1 Protein Homology CDS 1744930 1746158 . - 0 ID=cds-LI478_RS08400;Parent=gene-LI478_RS08400;Note=programmed frameshift%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558215.1;locus_tag=LI478_RS08400;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP085478.1 RefSeq gene 1746578 1747444 . - . ID=gene-LI478_RS08405;Name=LI478_RS08405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS08405 NZ_CP085478.1 Protein Homology CDS 1746578 1747444 . - 0 ID=cds-WP_074185273.1;Parent=gene-LI478_RS08405;Dbxref=Genbank:WP_074185273.1;Name=WP_074185273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004899270.1;locus_tag=LI478_RS08405;product=hypothetical protein;protein_id=WP_074185273.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1747730 1748536 . - . ID=gene-LI478_RS08410;Name=LI478_RS08410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS08410 NZ_CP085478.1 Protein Homology CDS 1747730 1748536 . - 0 ID=cds-WP_016530710.1;Parent=gene-LI478_RS08410;Dbxref=Genbank:WP_016530710.1;Name=WP_016530710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020457384.1;locus_tag=LI478_RS08410;product=SDR family oxidoreductase;protein_id=WP_016530710.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1748709 1749896 . + . ID=gene-LI478_RS08415;Name=LI478_RS08415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS08415 NZ_CP085478.1 Protein Homology CDS 1748709 1749896 . + 0 ID=cds-WP_016530711.1;Parent=gene-LI478_RS08415;Dbxref=Genbank:WP_016530711.1;Name=WP_016530711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016530711.1;locus_tag=LI478_RS08415;product=MFS transporter;protein_id=WP_016530711.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1749873 1752647 . - . ID=gene-LI478_RS08420;Name=LI478_RS08420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS08420 NZ_CP085478.1 Protein Homology CDS 1749873 1752647 . - 0 ID=cds-WP_049192764.1;Parent=gene-LI478_RS08420;Dbxref=Genbank:WP_049192764.1;Name=WP_049192764.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004899261.1;locus_tag=LI478_RS08420;product=winged helix-turn-helix domain-containing protein;protein_id=WP_049192764.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1752883 1753740 . - . ID=gene-LI478_RS08425;Name=LI478_RS08425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS08425 NZ_CP085478.1 Protein Homology CDS 1752883 1753740 . - 0 ID=cds-WP_004899257.1;Parent=gene-LI478_RS08425;Dbxref=Genbank:WP_004899257.1;Name=WP_004899257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004899257.1;locus_tag=LI478_RS08425;product=DMT family transporter;protein_id=WP_004899257.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1753740 1754624 . - . ID=gene-LI478_RS08430;Name=LI478_RS08430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS08430 NZ_CP085478.1 Protein Homology CDS 1753740 1754624 . - 0 ID=cds-WP_004899254.1;Parent=gene-LI478_RS08430;Dbxref=Genbank:WP_004899254.1;Name=WP_004899254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012539974.1;locus_tag=LI478_RS08430;product=MurR/RpiR family transcriptional regulator;protein_id=WP_004899254.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1754701 1755597 . + . ID=gene-LI478_RS08435;Name=LI478_RS08435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS08435 NZ_CP085478.1 Protein Homology CDS 1754701 1755597 . + 0 ID=cds-WP_004899253.1;Parent=gene-LI478_RS08435;Dbxref=Genbank:WP_004899253.1;Name=WP_004899253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012539953.1;locus_tag=LI478_RS08435;product=oxidoreductase;protein_id=WP_004899253.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1755609 1756331 . + . ID=gene-LI478_RS08440;Name=LI478_RS08440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS08440 NZ_CP085478.1 Protein Homology CDS 1755609 1756331 . + 0 ID=cds-WP_064153337.1;Parent=gene-LI478_RS08440;Dbxref=Genbank:WP_064153337.1;Name=WP_064153337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016530706.1;locus_tag=LI478_RS08440;product=sulfite exporter TauE/SafE family protein;protein_id=WP_064153337.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1756481 1757749 . - . ID=gene-LI478_RS08445;Name=LI478_RS08445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS08445 NZ_CP085478.1 Protein Homology CDS 1756481 1757749 . - 0 ID=cds-WP_048976372.1;Parent=gene-LI478_RS08445;Dbxref=Genbank:WP_048976372.1;Name=WP_048976372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012541215.1;locus_tag=LI478_RS08445;product=integrase arm-type DNA-binding domain-containing protein;protein_id=WP_048976372.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1757911 1757986 . - . ID=gene-LI478_RS08450;Name=LI478_RS08450;gbkey=Gene;gene_biotype=tRNA;locus_tag=LI478_RS08450 NZ_CP085478.1 tRNAscan-SE tRNA 1757911 1757986 . - . ID=rna-LI478_RS08450;Parent=gene-LI478_RS08450;anticodon=(pos:complement(1757951..1757953));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS08450;product=tRNA-Asn NZ_CP085478.1 tRNAscan-SE exon 1757911 1757986 . - . ID=exon-LI478_RS08450-1;Parent=rna-LI478_RS08450;anticodon=(pos:complement(1757951..1757953));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS08450;product=tRNA-Asn NZ_CP085478.1 RefSeq gene 1758179 1759615 . + . ID=gene-LI478_RS08460;Name=LI478_RS08460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS08460 NZ_CP085478.1 Protein Homology CDS 1758179 1759615 . + 0 ID=cds-WP_159204610.1;Parent=gene-LI478_RS08460;Dbxref=Genbank:WP_159204610.1;Name=WP_159204610.1;Ontology_term=GO:0055085,GO:0015297;gbkey=CDS;go_function=antiporter activity|0015297||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227805.1;locus_tag=LI478_RS08460;product=EmmdR/YeeO family multidrug/toxin efflux MATE transporter;protein_id=WP_159204610.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1759744 1759819 . + . ID=gene-LI478_RS08465;Name=LI478_RS08465;gbkey=Gene;gene_biotype=tRNA;locus_tag=LI478_RS08465 NZ_CP085478.1 tRNAscan-SE tRNA 1759744 1759819 . + . ID=rna-LI478_RS08465;Parent=gene-LI478_RS08465;anticodon=(pos:1759777..1759779);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS08465;product=tRNA-Asn NZ_CP085478.1 tRNAscan-SE exon 1759744 1759819 . + . ID=exon-LI478_RS08465-1;Parent=rna-LI478_RS08465;anticodon=(pos:1759777..1759779);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS08465;product=tRNA-Asn NZ_CP085478.1 RefSeq gene 1759981 1761435 . - . ID=gene-LI478_RS08470;Name=LI478_RS08470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS08470 NZ_CP085478.1 Protein Homology CDS 1759981 1761435 . - 0 ID=cds-WP_004148975.1;Parent=gene-LI478_RS08470;Dbxref=Genbank:WP_004148975.1;Name=WP_004148975.1;Ontology_term=GO:0009116,GO:0044209,GO:0008714;gbkey=CDS;go_function=AMP nucleosidase activity|0008714||IEA;go_process=nucleoside metabolic process|0009116||IEA,AMP salvage|0044209||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227804.1;locus_tag=LI478_RS08470;product=AMP nucleosidase;protein_id=WP_004148975.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1761565 1761810 . - . ID=gene-LI478_RS08475;Name=pmrD;gbkey=Gene;gene=pmrD;gene_biotype=protein_coding;locus_tag=LI478_RS08475 NZ_CP085478.1 Protein Homology CDS 1761565 1761810 . - 0 ID=cds-WP_004141189.1;Parent=gene-LI478_RS08475;Dbxref=Genbank:WP_004141189.1;Name=WP_004141189.1;gbkey=CDS;gene=pmrD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227803.1;locus_tag=LI478_RS08475;product=signal transduction protein PmrD;protein_id=WP_004141189.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1762083 1763705 . + . ID=gene-LI478_RS08480;Name=LI478_RS08480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS08480 NZ_CP085478.1 Protein Homology CDS 1762083 1763705 . + 0 ID=cds-WP_032415199.1;Parent=gene-LI478_RS08480;Dbxref=Genbank:WP_032415199.1;Name=WP_032415199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227802.1;locus_tag=LI478_RS08480;product=alpha/beta fold hydrolase;protein_id=WP_032415199.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1763616 1764548 . - . ID=gene-LI478_RS08485;Name=LI478_RS08485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS08485 NZ_CP085478.1 Protein Homology CDS 1763616 1764548 . - 0 ID=cds-WP_004180464.1;Parent=gene-LI478_RS08485;Dbxref=Genbank:WP_004180464.1;Name=WP_004180464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004141186.1;locus_tag=LI478_RS08485;product=hypothetical protein;protein_id=WP_004180464.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1764669 1765631 . - . ID=gene-LI478_RS08490;Name=LI478_RS08490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS08490 NZ_CP085478.1 Protein Homology CDS 1764669 1765631 . - 0 ID=cds-WP_223174639.1;Parent=gene-LI478_RS08490;Dbxref=Genbank:WP_223174639.1;Name=WP_223174639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020804319.1;locus_tag=LI478_RS08490;product=oxidoreductase;protein_id=WP_223174639.1;transl_table=11 NZ_CP085478.1 RefSeq pseudogene 1765522 1766347 . - . ID=gene-LI478_RS08495;Name=LI478_RS08495;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS08495;pseudo=true NZ_CP085478.1 Protein Homology CDS 1765522 1766347 . - 0 ID=cds-LI478_RS08495;Parent=gene-LI478_RS08495;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227799.1;locus_tag=LI478_RS08495;product=TetR/AcrR family transcriptional regulator;pseudo=true;transl_table=11 NZ_CP085478.1 RefSeq gene 1766939 1768573 . + . ID=gene-LI478_RS08500;Name=LI478_RS08500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS08500 NZ_CP085478.1 Protein Homology CDS 1766939 1768573 . + 0 ID=cds-WP_004148971.1;Parent=gene-LI478_RS08500;Dbxref=Genbank:WP_004148971.1;Name=WP_004148971.1;Ontology_term=GO:0006814,GO:0006885,GO:1902600,GO:0015385;gbkey=CDS;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,regulation of pH|0006885||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227798.1;locus_tag=LI478_RS08500;product=Na+/H+ antiporter;protein_id=WP_004148971.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1768667 1768742 . - . ID=gene-LI478_RS08505;Name=LI478_RS08505;gbkey=Gene;gene_biotype=tRNA;locus_tag=LI478_RS08505 NZ_CP085478.1 tRNAscan-SE tRNA 1768667 1768742 . - . ID=rna-LI478_RS08505;Parent=gene-LI478_RS08505;anticodon=(pos:complement(1768707..1768709));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS08505;product=tRNA-Asn NZ_CP085478.1 tRNAscan-SE exon 1768667 1768742 . - . ID=exon-LI478_RS08505-1;Parent=rna-LI478_RS08505;anticodon=(pos:complement(1768707..1768709));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS08505;product=tRNA-Asn NZ_CP085478.1 RefSeq gene 1769073 1769990 . + . ID=gene-LI478_RS08510;Name=nac;gbkey=Gene;gene=nac;gene_biotype=protein_coding;locus_tag=LI478_RS08510 NZ_CP085478.1 Protein Homology CDS 1769073 1769990 . + 0 ID=cds-WP_064153329.1;Parent=gene-LI478_RS08510;Dbxref=Genbank:WP_064153329.1;Name=WP_064153329.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=nac;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227759.1;locus_tag=LI478_RS08510;product=nitrogen assimilation transcriptional regulator NAC;protein_id=WP_064153329.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1770097 1771047 . + . ID=gene-LI478_RS08515;Name=cbl;gbkey=Gene;gene=cbl;gene_biotype=protein_coding;locus_tag=LI478_RS08515 NZ_CP085478.1 Protein Homology CDS 1770097 1771047 . + 0 ID=cds-WP_004180456.1;Parent=gene-LI478_RS08515;Dbxref=Genbank:WP_004180456.1;Name=WP_004180456.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=cbl;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227758.1;locus_tag=LI478_RS08515;product=HTH-type transcriptional regulator Cbl;protein_id=WP_004180456.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1771126 1772067 . + . ID=gene-LI478_RS08520;Name=ldtA;gbkey=Gene;gene=ldtA;gene_biotype=protein_coding;locus_tag=LI478_RS08520 NZ_CP085478.1 Protein Homology CDS 1771126 1772067 . + 0 ID=cds-WP_032411441.1;Parent=gene-LI478_RS08520;Dbxref=Genbank:WP_032411441.1;Name=WP_032411441.1;Ontology_term=GO:0016740;gbkey=CDS;gene=ldtA;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227757.1;locus_tag=LI478_RS08520;product=L%2CD-transpeptidase;protein_id=WP_032411441.1;transl_table=11 NZ_CP085478.1 RefSeq pseudogene 1772217 1772414 . - . ID=gene-LI478_RS08525;Name=LI478_RS08525;end_range=1772414,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS08525;partial=true;pseudo=true NZ_CP085478.1 Protein Homology CDS 1772217 1772414 . - 0 ID=cds-LI478_RS08525;Parent=gene-LI478_RS08525;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1772414,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004157938.1;locus_tag=LI478_RS08525;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP085478.1 RefSeq pseudogene 1772451 1773203 . - . ID=gene-LI478_RS08530;Name=LI478_RS08530;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS08530;pseudo=true NZ_CP085478.1 Protein Homology CDS 1772451 1773203 . - 0 ID=cds-LI478_RS08530;Parent=gene-LI478_RS08530;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004212963.1;locus_tag=LI478_RS08530;product=LysR substrate-binding domain-containing protein;pseudo=true;transl_table=11 NZ_CP085478.1 RefSeq gene 1773556 1773631 . - . ID=gene-LI478_RS08535;Name=LI478_RS08535;gbkey=Gene;gene_biotype=tRNA;locus_tag=LI478_RS08535 NZ_CP085478.1 tRNAscan-SE tRNA 1773556 1773631 . - . ID=rna-LI478_RS08535;Parent=gene-LI478_RS08535;anticodon=(pos:complement(1773596..1773598));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS08535;product=tRNA-Asn NZ_CP085478.1 tRNAscan-SE exon 1773556 1773631 . - . ID=exon-LI478_RS08535-1;Parent=rna-LI478_RS08535;anticodon=(pos:complement(1773596..1773598));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS08535;product=tRNA-Asn NZ_CP085478.1 RefSeq gene 1773732 1774532 . - . ID=gene-LI478_RS08540;Name=mtfA;gbkey=Gene;gene=mtfA;gene_biotype=protein_coding;locus_tag=LI478_RS08540 NZ_CP085478.1 Protein Homology CDS 1773732 1774532 . - 0 ID=cds-WP_004227143.1;Parent=gene-LI478_RS08540;Dbxref=Genbank:WP_004227143.1;Name=WP_004227143.1;Ontology_term=GO:0008237;gbkey=CDS;gene=mtfA;go_function=metallopeptidase activity|0008237||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227754.1;locus_tag=LI478_RS08540;product=DgsA anti-repressor MtfA;protein_id=WP_004227143.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1774623 1774712 . + . ID=gene-LI478_RS08545;Name=LI478_RS08545;gbkey=Gene;gene_biotype=tRNA;locus_tag=LI478_RS08545 NZ_CP085478.1 tRNAscan-SE tRNA 1774623 1774712 . + . ID=rna-LI478_RS08545;Parent=gene-LI478_RS08545;anticodon=(pos:1774657..1774659);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS08545;product=tRNA-Ser NZ_CP085478.1 tRNAscan-SE exon 1774623 1774712 . + . ID=exon-LI478_RS08545-1;Parent=rna-LI478_RS08545;anticodon=(pos:1774657..1774659);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS08545;product=tRNA-Ser NZ_CP085478.1 RefSeq gene 1774985 1776130 . - . ID=gene-LI478_RS08550;Name=ompC;gbkey=Gene;gene=ompC;gene_biotype=protein_coding;locus_tag=LI478_RS08550 NZ_CP085478.1 Protein Homology CDS 1774985 1776130 . - 0 ID=cds-WP_002911596.1;Parent=gene-LI478_RS08550;Dbxref=Genbank:WP_002911596.1;Name=WP_002911596.1;Ontology_term=GO:0034220,GO:0015288;gbkey=CDS;gene=ompC;go_function=porin activity|0015288||IEA;go_process=ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227753.1;locus_tag=LI478_RS08550;product=porin OmpC;protein_id=WP_002911596.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1776669 1776950 . + . ID=gene-LI478_RS08555;Name=drpB;gbkey=Gene;gene=drpB;gene_biotype=protein_coding;locus_tag=LI478_RS08555 NZ_CP085478.1 Protein Homology CDS 1776669 1776950 . + 0 ID=cds-WP_004151461.1;Parent=gene-LI478_RS08555;Dbxref=Genbank:WP_004151461.1;Name=WP_004151461.1;gbkey=CDS;gene=drpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019725580.1;locus_tag=LI478_RS08555;product=cell division protein DrpB;protein_id=WP_004151461.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1776993 1777700 . + . ID=gene-LI478_RS08560;Name=LI478_RS08560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS08560 NZ_CP085478.1 Protein Homology CDS 1776993 1777700 . + 0 ID=cds-WP_002911594.1;Parent=gene-LI478_RS08560;Dbxref=Genbank:WP_002911594.1;Name=WP_002911594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227750.1;locus_tag=LI478_RS08560;product=phosphohydrolase;protein_id=WP_002911594.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1777777 1779177 . + . ID=gene-LI478_RS08565;Name=LI478_RS08565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS08565 NZ_CP085478.1 Protein Homology CDS 1777777 1779177 . + 0 ID=cds-WP_074185272.1;Parent=gene-LI478_RS08565;Dbxref=Genbank:WP_074185272.1;Name=WP_074185272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227749.1;locus_tag=LI478_RS08565;product=DNA cytosine methyltransferase;protein_id=WP_074185272.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1779158 1779652 . + . ID=gene-LI478_RS08570;Name=LI478_RS08570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS08570 NZ_CP085478.1 Protein Homology CDS 1779158 1779652 . + 0 ID=cds-WP_064153326.1;Parent=gene-LI478_RS08570;Dbxref=Genbank:WP_064153326.1;Name=WP_064153326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227748.1;locus_tag=LI478_RS08570;product=very short patch repair endonuclease;protein_id=WP_064153326.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1779627 1780538 . - . ID=gene-LI478_RS08575;Name=yedA;gbkey=Gene;gene=yedA;gene_biotype=protein_coding;locus_tag=LI478_RS08575 NZ_CP085478.1 Protein Homology CDS 1779627 1780538 . - 0 ID=cds-WP_016529443.1;Parent=gene-LI478_RS08575;Dbxref=Genbank:WP_016529443.1;Name=WP_016529443.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yedA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227747.1;locus_tag=LI478_RS08575;product=drug/metabolite exporter YedA;protein_id=WP_016529443.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1780722 1781633 . + . ID=gene-LI478_RS08580;Name=LI478_RS08580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS08580 NZ_CP085478.1 Protein Homology CDS 1780722 1781633 . + 0 ID=cds-WP_002911591.1;Parent=gene-LI478_RS08580;Dbxref=Genbank:WP_002911591.1;Name=WP_002911591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227746.1;locus_tag=LI478_RS08580;product=DUF808 domain-containing protein;protein_id=WP_002911591.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1781749 1783428 . + . ID=gene-LI478_RS08585;Name=dgcQ;gbkey=Gene;gene=dgcQ;gene_biotype=protein_coding;locus_tag=LI478_RS08585 NZ_CP085478.1 Protein Homology CDS 1781749 1783428 . + 0 ID=cds-WP_064153323.1;Parent=gene-LI478_RS08585;Dbxref=Genbank:WP_064153323.1;Name=WP_064153323.1;gbkey=CDS;gene=dgcQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004175394.1;locus_tag=LI478_RS08585;product=cellulose biosynthesis regulator diguanylate cyclase DgcQ;protein_id=WP_064153323.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1783728 1783949 . - . ID=gene-LI478_RS08590;Name=LI478_RS08590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS08590 NZ_CP085478.1 Protein Homology CDS 1783728 1783949 . - 0 ID=cds-WP_002911589.1;Parent=gene-LI478_RS08590;Dbxref=Genbank:WP_002911589.1;Name=WP_002911589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227744.1;locus_tag=LI478_RS08590;product=YodD family protein;protein_id=WP_002911589.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1784083 1784274 . + . ID=gene-LI478_RS08595;Name=dsrB;gbkey=Gene;gene=dsrB;gene_biotype=protein_coding;locus_tag=LI478_RS08595 NZ_CP085478.1 Protein Homology CDS 1784083 1784274 . + 0 ID=cds-WP_002911586.1;Parent=gene-LI478_RS08595;Dbxref=Genbank:WP_002911586.1;Name=WP_002911586.1;gbkey=CDS;gene=dsrB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227743.1;locus_tag=LI478_RS08595;product=protein DsrB;protein_id=WP_002911586.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1784307 1784930 . - . ID=gene-LI478_RS08600;Name=rcsA;gbkey=Gene;gene=rcsA;gene_biotype=protein_coding;locus_tag=LI478_RS08600 NZ_CP085478.1 Protein Homology CDS 1784307 1784930 . - 0 ID=cds-WP_004180447.1;Parent=gene-LI478_RS08600;Dbxref=Genbank:WP_004180447.1;Name=WP_004180447.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=rcsA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227742.1;locus_tag=LI478_RS08600;product=transcriptional regulator RcsA;protein_id=WP_004180447.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1785303 1785737 . + . ID=gene-LI478_RS08605;Name=LI478_RS08605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS08605 NZ_CP085478.1 Protein Homology CDS 1785303 1785737 . + 0 ID=cds-WP_004189223.1;Parent=gene-LI478_RS08605;Dbxref=Genbank:WP_004189223.1;Name=WP_004189223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227741.1;locus_tag=LI478_RS08605;product=lipoprotein;protein_id=WP_004189223.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1785779 1787266 . - . ID=gene-LI478_RS08610;Name=amyA;gbkey=Gene;gene=amyA;gene_biotype=protein_coding;locus_tag=LI478_RS08610 NZ_CP085478.1 Protein Homology CDS 1785779 1787266 . - 0 ID=cds-WP_004899206.1;Parent=gene-LI478_RS08610;Dbxref=Genbank:WP_004899206.1;Name=WP_004899206.1;Ontology_term=GO:0005975,GO:0004553,GO:0005509;gbkey=CDS;gene=amyA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,calcium ion binding|0005509||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004136602.1;locus_tag=LI478_RS08610;product=alpha-amylase;protein_id=WP_004899206.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1787467 1788267 . + . ID=gene-LI478_RS08615;Name=tcyJ;gbkey=Gene;gene=tcyJ;gene_biotype=protein_coding;locus_tag=LI478_RS08615 NZ_CP085478.1 Protein Homology CDS 1787467 1788267 . + 0 ID=cds-WP_004141135.1;Parent=gene-LI478_RS08615;Dbxref=Genbank:WP_004141135.1;Name=WP_004141135.1;Ontology_term=GO:0015276,GO:0016020;gbkey=CDS;gene=tcyJ;go_component=membrane|0016020||IEA;go_function=ligand-gated ion channel activity|0015276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227739.1;locus_tag=LI478_RS08615;product=cystine ABC transporter substrate-binding protein;protein_id=WP_004141135.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1788363 1789349 . + . ID=gene-LI478_RS08620;Name=dcyD;gbkey=Gene;gene=dcyD;gene_biotype=protein_coding;locus_tag=LI478_RS08620 NZ_CP085478.1 Protein Homology CDS 1788363 1789349 . + 0 ID=cds-WP_021313403.1;Parent=gene-LI478_RS08620;Dbxref=Genbank:WP_021313403.1;Name=WP_021313403.1;Ontology_term=GO:0019148;gbkey=CDS;gene=dcyD;go_function=D-cysteine desulfhydrase activity|0019148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227738.1;locus_tag=LI478_RS08620;product=D-cysteine desulfhydrase;protein_id=WP_021313403.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1789365 1790033 . + . ID=gene-LI478_RS08625;Name=tcyL;gbkey=Gene;gene=tcyL;gene_biotype=protein_coding;locus_tag=LI478_RS08625 NZ_CP085478.1 Protein Homology CDS 1789365 1790033 . + 0 ID=cds-WP_002911547.1;Parent=gene-LI478_RS08625;Dbxref=Genbank:WP_002911547.1;Name=WP_002911547.1;gbkey=CDS;gene=tcyL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227737.1;locus_tag=LI478_RS08625;product=cystine ABC transporter permease;protein_id=WP_002911547.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1790030 1790782 . + . ID=gene-LI478_RS08630;Name=yecC;gbkey=Gene;gene=yecC;gene_biotype=protein_coding;locus_tag=LI478_RS08630 NZ_CP085478.1 Protein Homology CDS 1790030 1790782 . + 0 ID=cds-WP_004151455.1;Parent=gene-LI478_RS08630;Dbxref=Genbank:WP_004151455.1;Name=WP_004151455.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424;gbkey=CDS;gene=yecC;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416427.1;locus_tag=LI478_RS08630;product=L-cystine ABC transporter ATP-binding protein YecC;protein_id=WP_004151455.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1791100 1791822 . + . ID=gene-LI478_RS08635;Name=sdiA;gbkey=Gene;gene=sdiA;gene_biotype=protein_coding;locus_tag=LI478_RS08635 NZ_CP085478.1 Protein Homology CDS 1791100 1791822 . + 0 ID=cds-WP_002911542.1;Parent=gene-LI478_RS08635;Dbxref=Genbank:WP_002911542.1;Name=WP_002911542.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=sdiA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227735.1;locus_tag=LI478_RS08635;product=transcriptional regulator SdiA;protein_id=WP_002911542.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1791890 1792114 . - . ID=gene-LI478_RS08640;Name=LI478_RS08640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS08640 NZ_CP085478.1 Protein Homology CDS 1791890 1792114 . - 0 ID=cds-WP_002911541.1;Parent=gene-LI478_RS08640;Dbxref=Genbank:WP_002911541.1;Name=WP_002911541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227734.1;locus_tag=LI478_RS08640;product=DUF2594 family protein;protein_id=WP_002911541.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1792576 1793232 . + . ID=gene-LI478_RS08645;Name=uvrY;gbkey=Gene;gene=uvrY;gene_biotype=protein_coding;locus_tag=LI478_RS08645 NZ_CP085478.1 Protein Homology CDS 1792576 1793232 . + 0 ID=cds-WP_002911539.1;Parent=gene-LI478_RS08645;Dbxref=Genbank:WP_002911539.1;Name=WP_002911539.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=uvrY;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310679.1;locus_tag=LI478_RS08645;product=UvrY/SirA/GacA family response regulator transcription factor;protein_id=WP_002911539.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1793229 1795061 . + . ID=gene-LI478_RS08650;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=LI478_RS08650 NZ_CP085478.1 Protein Homology CDS 1793229 1795061 . + 0 ID=cds-WP_002911538.1;Parent=gene-LI478_RS08650;Dbxref=Genbank:WP_002911538.1;Name=WP_002911538.1;Ontology_term=GO:0006289,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrC;go_component=excinuclease repair complex|0009380||IEA;go_function=excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227732.1;locus_tag=LI478_RS08650;product=excinuclease ABC subunit UvrC;protein_id=WP_002911538.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1795119 1795667 . + . ID=gene-LI478_RS08655;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=LI478_RS08655 NZ_CP085478.1 Protein Homology CDS 1795119 1795667 . + 0 ID=cds-WP_004141115.1;Parent=gene-LI478_RS08655;Dbxref=Genbank:WP_004141115.1;Name=WP_004141115.1;gbkey=CDS;gene=pgsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310677.1;locus_tag=LI478_RS08655;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=WP_004141115.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1795818 1795893 . + . ID=gene-LI478_RS08660;Name=LI478_RS08660;gbkey=Gene;gene_biotype=tRNA;locus_tag=LI478_RS08660 NZ_CP085478.1 tRNAscan-SE tRNA 1795818 1795893 . + . ID=rna-LI478_RS08660;Parent=gene-LI478_RS08660;anticodon=(pos:1795851..1795853);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS08660;product=tRNA-Gly NZ_CP085478.1 tRNAscan-SE exon 1795818 1795893 . + . ID=exon-LI478_RS08660-1;Parent=rna-LI478_RS08660;anticodon=(pos:1795851..1795853);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS08660;product=tRNA-Gly NZ_CP085478.1 RefSeq gene 1795934 1796007 . + . ID=gene-LI478_RS08665;Name=LI478_RS08665;gbkey=Gene;gene_biotype=tRNA;locus_tag=LI478_RS08665 NZ_CP085478.1 tRNAscan-SE tRNA 1795934 1796007 . + . ID=rna-LI478_RS08665;Parent=gene-LI478_RS08665;anticodon=(pos:1795966..1795968);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS08665;product=tRNA-Cys NZ_CP085478.1 tRNAscan-SE exon 1795934 1796007 . + . ID=exon-LI478_RS08665-1;Parent=rna-LI478_RS08665;anticodon=(pos:1795966..1795968);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS08665;product=tRNA-Cys NZ_CP085478.1 RefSeq gene 1796021 1796107 . + . ID=gene-LI478_RS08670;Name=LI478_RS08670;gbkey=Gene;gene_biotype=tRNA;locus_tag=LI478_RS08670 NZ_CP085478.1 tRNAscan-SE tRNA 1796021 1796107 . + . ID=rna-LI478_RS08670;Parent=gene-LI478_RS08670;anticodon=(pos:1796055..1796057);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS08670;product=tRNA-Leu NZ_CP085478.1 tRNAscan-SE exon 1796021 1796107 . + . ID=exon-LI478_RS08670-1;Parent=rna-LI478_RS08670;anticodon=(pos:1796055..1796057);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS08670;product=tRNA-Leu NZ_CP085478.1 RefSeq gene 1796335 1797216 . + . ID=gene-LI478_RS08675;Name=LI478_RS08675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS08675 NZ_CP085478.1 Protein Homology CDS 1796335 1797216 . + 0 ID=cds-WP_004189231.1;Parent=gene-LI478_RS08675;Dbxref=Genbank:WP_004189231.1;Name=WP_004189231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227730.1;locus_tag=LI478_RS08675;product=dihydrodipicolinate synthase family protein;protein_id=WP_004189231.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1797315 1797983 . + . ID=gene-LI478_RS08680;Name=LI478_RS08680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS08680 NZ_CP085478.1 Protein Homology CDS 1797315 1797983 . + 0 ID=cds-WP_004141106.1;Parent=gene-LI478_RS08680;Dbxref=Genbank:WP_004141106.1;Name=WP_004141106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004141106.1;locus_tag=LI478_RS08680;product=YecA family protein;protein_id=WP_004141106.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1798008 1799219 . - . ID=gene-LI478_RS08685;Name=tyrP;gbkey=Gene;gene=tyrP;gene_biotype=protein_coding;locus_tag=LI478_RS08685 NZ_CP085478.1 Protein Homology CDS 1798008 1799219 . - 0 ID=cds-WP_048332897.1;Parent=gene-LI478_RS08685;Dbxref=Genbank:WP_048332897.1;Name=WP_048332897.1;Ontology_term=GO:0015801,GO:0015173,GO:0005886;gbkey=CDS;gene=tyrP;go_component=plasma membrane|0005886||IEA;go_function=aromatic amino acid transmembrane transporter activity|0015173||IEA;go_process=aromatic amino acid transport|0015801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227728.1;locus_tag=LI478_RS08685;product=tyrosine transporter TyrP;protein_id=WP_048332897.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1799411 1799650 . + . ID=gene-LI478_RS08690;Name=LI478_RS08690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS08690 NZ_CP085478.1 Protein Homology CDS 1799411 1799650 . + 0 ID=cds-WP_004175410.1;Parent=gene-LI478_RS08690;Dbxref=Genbank:WP_004175410.1;Name=WP_004175410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227727.1;locus_tag=LI478_RS08690;product=YecH family protein;protein_id=WP_004175410.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1799686 1800183 . - . ID=gene-LI478_RS08695;Name=ftnA;gbkey=Gene;gene=ftnA;gene_biotype=protein_coding;locus_tag=LI478_RS08695 NZ_CP085478.1 Protein Homology CDS 1799686 1800183 . - 0 ID=cds-WP_004141101.1;Parent=gene-LI478_RS08695;Dbxref=Genbank:WP_004141101.1;Name=WP_004141101.1;Ontology_term=GO:0006879,GO:0008199;gbkey=CDS;gene=ftnA;go_function=ferric iron binding|0008199||IEA;go_process=cellular iron ion homeostasis|0006879||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227726.1;locus_tag=LI478_RS08695;product=non-heme ferritin;protein_id=WP_004141101.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1800241 1800420 . - . ID=gene-LI478_RS08700;Name=LI478_RS08700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS08700 NZ_CP085478.1 Protein Homology CDS 1800241 1800420 . - 0 ID=cds-WP_020324969.1;Parent=gene-LI478_RS08700;Dbxref=Genbank:WP_020324969.1;Name=WP_020324969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227725.1;locus_tag=LI478_RS08700;product=hypothetical protein;protein_id=WP_020324969.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1800591 1801229 . + . ID=gene-LI478_RS08705;Name=LI478_RS08705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS08705 NZ_CP085478.1 Protein Homology CDS 1800591 1801229 . + 0 ID=cds-WP_002911528.1;Parent=gene-LI478_RS08705;Dbxref=Genbank:WP_002911528.1;Name=WP_002911528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227724.1;locus_tag=LI478_RS08705;product=RpiB/LacA/LacB family sugar-phosphate isomerase;protein_id=WP_002911528.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1801279 1802700 . - . ID=gene-LI478_RS08710;Name=LI478_RS08710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS08710 NZ_CP085478.1 Protein Homology CDS 1801279 1802700 . - 0 ID=cds-WP_064153321.1;Parent=gene-LI478_RS08710;Dbxref=Genbank:WP_064153321.1;Name=WP_064153321.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227723.1;locus_tag=LI478_RS08710;product=MFS transporter;protein_id=WP_064153321.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1802851 1803102 . + . ID=gene-LI478_RS08715;Name=LI478_RS08715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS08715 NZ_CP085478.1 Protein Homology CDS 1802851 1803102 . + 0 ID=cds-WP_002911524.1;Parent=gene-LI478_RS08715;Dbxref=Genbank:WP_002911524.1;Name=WP_002911524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227722.1;locus_tag=LI478_RS08715;product=DUF2766 family protein;protein_id=WP_002911524.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1803140 1804651 . - . ID=gene-LI478_RS08720;Name=LI478_RS08720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS08720 NZ_CP085478.1 Protein Homology CDS 1803140 1804651 . - 0 ID=cds-WP_002911522.1;Parent=gene-LI478_RS08720;Dbxref=Genbank:WP_002911522.1;Name=WP_002911522.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227721.1;locus_tag=LI478_RS08720;product=MFS transporter;protein_id=WP_002911522.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1804717 1804875 . + . ID=gene-LI478_RS08725;Name=LI478_RS08725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS08725 NZ_CP085478.1 Protein Homology CDS 1804717 1804875 . + 0 ID=cds-WP_064153320.1;Parent=gene-LI478_RS08725;Dbxref=Genbank:WP_064153320.1;Name=WP_064153320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227720.1;locus_tag=LI478_RS08725;product=hypothetical protein;protein_id=WP_064153320.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1804946 1805455 . - . ID=gene-LI478_RS08730;Name=LI478_RS08730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS08730 NZ_CP085478.1 Protein Homology CDS 1804946 1805455 . - 0 ID=cds-WP_004175413.1;Parent=gene-LI478_RS08730;Dbxref=Genbank:WP_004175413.1;Name=WP_004175413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227719.1;locus_tag=LI478_RS08730;product=non-heme ferritin-like protein;protein_id=WP_004175413.1;transl_table=11 NZ_CP085478.1 RefSeq pseudogene 1805890 1805985 . - . ID=gene-LI478_RS08735;Name=LI478_RS08735;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS08735;partial=true;pseudo=true;start_range=.,1805890 NZ_CP085478.1 Protein Homology CDS 1805890 1805985 . - 0 ID=cds-LI478_RS08735;Parent=gene-LI478_RS08735;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227718.1;locus_tag=LI478_RS08735;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1805890;transl_table=11 NZ_CP085478.1 RefSeq gene 1806347 1807327 . + . ID=gene-LI478_RS08740;Name=LI478_RS08740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS08740 NZ_CP085478.1 Protein Homology CDS 1806347 1807327 . + 0 ID=cds-WP_002911518.1;Parent=gene-LI478_RS08740;Dbxref=Genbank:WP_002911518.1;Name=WP_002911518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227717.1;locus_tag=LI478_RS08740;product=arabinose ABC transporter substrate-binding protein;protein_id=WP_002911518.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1807390 1808904 . + . ID=gene-LI478_RS08745;Name=araG;gbkey=Gene;gene=araG;gene_biotype=protein_coding;locus_tag=LI478_RS08745 NZ_CP085478.1 Protein Homology CDS 1807390 1808904 . + 0 ID=cds-WP_002911516.1;Parent=gene-LI478_RS08745;Dbxref=Genbank:WP_002911516.1;Name=WP_002911516.1;Ontology_term=GO:0042882,GO:0005524,GO:0015612,GO:0016020;gbkey=CDS;gene=araG;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type L-arabinose transporter activity|0015612||IEA;go_process=L-arabinose transmembrane transport|0042882||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227716.1;locus_tag=LI478_RS08745;product=L-arabinose ABC transporter ATP-binding protein AraG;protein_id=WP_002911516.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1808919 1809899 . + . ID=gene-LI478_RS08750;Name=araH;gbkey=Gene;gene=araH;gene_biotype=protein_coding;locus_tag=LI478_RS08750 NZ_CP085478.1 Protein Homology CDS 1808919 1809899 . + 0 ID=cds-WP_002911507.1;Parent=gene-LI478_RS08750;Dbxref=Genbank:WP_002911507.1;Name=WP_002911507.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=araH;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227715.1;locus_tag=LI478_RS08750;product=L-arabinose ABC transporter permease AraH;protein_id=WP_002911507.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1810061 1810849 . + . ID=gene-LI478_RS08755;Name=otsB;gbkey=Gene;gene=otsB;gene_biotype=protein_coding;locus_tag=LI478_RS08755 NZ_CP085478.1 Protein Homology CDS 1810061 1810849 . + 0 ID=cds-WP_032415194.1;Parent=gene-LI478_RS08755;Dbxref=Genbank:WP_032415194.1;Name=WP_032415194.1;Ontology_term=GO:0005992,GO:0004805;gbkey=CDS;gene=otsB;go_function=trehalose-phosphatase activity|0004805||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227714.1;locus_tag=LI478_RS08755;product=trehalose-phosphatase;protein_id=WP_032415194.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1810824 1812248 . + . ID=gene-LI478_RS08760;Name=otsA;gbkey=Gene;gene=otsA;gene_biotype=protein_coding;locus_tag=LI478_RS08760 NZ_CP085478.1 Protein Homology CDS 1810824 1812248 . + 0 ID=cds-WP_004175414.1;Parent=gene-LI478_RS08760;Dbxref=Genbank:WP_004175414.1;Name=WP_004175414.1;Ontology_term=GO:0005992,GO:0003825;gbkey=CDS;gene=otsA;go_function=alpha%2Calpha-trehalose-phosphate synthase (UDP-forming) activity|0003825||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227713.1;locus_tag=LI478_RS08760;product=alpha%2Calpha-trehalose-phosphate synthase;protein_id=WP_004175414.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1812272 1812700 . - . ID=gene-LI478_RS08765;Name=uspC;gbkey=Gene;gene=uspC;gene_biotype=protein_coding;locus_tag=LI478_RS08765 NZ_CP085478.1 Protein Homology CDS 1812272 1812700 . - 0 ID=cds-WP_002911500.1;Parent=gene-LI478_RS08765;Dbxref=Genbank:WP_002911500.1;Name=WP_002911500.1;gbkey=CDS;gene=uspC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227712.1;locus_tag=LI478_RS08765;product=universal stress protein UspC;protein_id=WP_002911500.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1813054 1814637 . + . ID=gene-LI478_RS08770;Name=LI478_RS08770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS08770 NZ_CP085478.1 Protein Homology CDS 1813054 1814637 . + 0 ID=cds-WP_064153317.1;Parent=gene-LI478_RS08770;Dbxref=Genbank:WP_064153317.1;Name=WP_064153317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227711.1;locus_tag=LI478_RS08770;product=MFS transporter;protein_id=WP_064153317.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1814642 1815781 . + . ID=gene-LI478_RS08775;Name=LI478_RS08775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS08775 NZ_CP085478.1 Protein Homology CDS 1814642 1815781 . + 0 ID=cds-WP_002911497.1;Parent=gene-LI478_RS08775;Dbxref=Genbank:WP_002911497.1;Name=WP_002911497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227710.1;locus_tag=LI478_RS08775;product=glycoside hydrolase family 105 protein;protein_id=WP_002911497.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1815843 1817576 . - . ID=gene-LI478_RS08780;Name=argS;gbkey=Gene;gene=argS;gene_biotype=protein_coding;locus_tag=LI478_RS08780 NZ_CP085478.1 Protein Homology CDS 1815843 1817576 . - 0 ID=cds-WP_004151452.1;Parent=gene-LI478_RS08780;Dbxref=Genbank:WP_004151452.1;Name=WP_004151452.1;Ontology_term=GO:0006420,GO:0004814,GO:0005737;gbkey=CDS;gene=argS;go_component=cytoplasm|0005737||IEA;go_function=arginine-tRNA ligase activity|0004814||IEA;go_process=arginyl-tRNA aminoacylation|0006420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001025321.1;locus_tag=LI478_RS08780;product=arginine--tRNA ligase;protein_id=WP_004151452.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1817812 1818381 . + . ID=gene-LI478_RS08785;Name=LI478_RS08785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS08785 NZ_CP085478.1 Protein Homology CDS 1817812 1818381 . + 0 ID=cds-WP_002911491.1;Parent=gene-LI478_RS08785;Dbxref=Genbank:WP_002911491.1;Name=WP_002911491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227708.1;locus_tag=LI478_RS08785;product=VOC family protein;protein_id=WP_002911491.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1818458 1819201 . + . ID=gene-LI478_RS08790;Name=cutC;gbkey=Gene;gene=cutC;gene_biotype=protein_coding;locus_tag=LI478_RS08790 NZ_CP085478.1 Protein Homology CDS 1818458 1819201 . + 0 ID=cds-WP_064153315.1;Parent=gene-LI478_RS08790;Dbxref=Genbank:WP_064153315.1;Name=WP_064153315.1;Ontology_term=GO:0055070,GO:0005507;gbkey=CDS;gene=cutC;go_function=copper ion binding|0005507||IEA;go_process=copper ion homeostasis|0055070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227707.1;locus_tag=LI478_RS08790;product=copper homeostasis protein CutC;protein_id=WP_064153315.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1819283 1820287 . - . ID=gene-LI478_RS08795;Name=cmoB;gbkey=Gene;gene=cmoB;gene_biotype=protein_coding;locus_tag=LI478_RS08795 NZ_CP085478.1 Protein Homology CDS 1819283 1820287 . - 0 ID=cds-WP_004151451.1;Parent=gene-LI478_RS08795;Dbxref=Genbank:WP_004151451.1;Name=WP_004151451.1;Ontology_term=GO:0002098,GO:0016765;gbkey=CDS;gene=cmoB;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA;go_process=tRNA wobble uridine modification|0002098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227706.1;locus_tag=LI478_RS08795;product=tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB;protein_id=WP_004151451.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1820284 1821027 . - . ID=gene-LI478_RS08800;Name=cmoA;gbkey=Gene;gene=cmoA;gene_biotype=protein_coding;locus_tag=LI478_RS08800 NZ_CP085478.1 Protein Homology CDS 1820284 1821027 . - 0 ID=cds-WP_002911486.1;Parent=gene-LI478_RS08800;Dbxref=Genbank:WP_002911486.1;Name=WP_002911486.1;gbkey=CDS;gene=cmoA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227705.1;locus_tag=LI478_RS08800;product=carboxy-S-adenosyl-L-methionine synthase CmoA;protein_id=WP_002911486.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1821067 1821462 . - . ID=gene-LI478_RS08805;Name=LI478_RS08805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS08805 NZ_CP085478.1 Protein Homology CDS 1821067 1821462 . - 0 ID=cds-WP_002911484.1;Parent=gene-LI478_RS08805;Dbxref=Genbank:WP_002911484.1;Name=WP_002911484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227704.1;locus_tag=LI478_RS08805;product=MAPEG family protein;protein_id=WP_002911484.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1821515 1822333 . - . ID=gene-LI478_RS08810;Name=LI478_RS08810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS08810 NZ_CP085478.1 Protein Homology CDS 1821515 1822333 . - 0 ID=cds-WP_002911483.1;Parent=gene-LI478_RS08810;Dbxref=Genbank:WP_002911483.1;Name=WP_002911483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227703.1;locus_tag=LI478_RS08810;product=DUF72 domain-containing protein;protein_id=WP_002911483.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1822330 1822896 . - . ID=gene-LI478_RS08815;Name=LI478_RS08815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS08815 NZ_CP085478.1 Protein Homology CDS 1822330 1822896 . - 0 ID=cds-WP_004145564.1;Parent=gene-LI478_RS08815;Dbxref=Genbank:WP_004145564.1;Name=WP_004145564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227702.1;locus_tag=LI478_RS08815;product=hydrolase;protein_id=WP_004145564.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1823164 1824951 . + . ID=gene-LI478_RS08820;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=LI478_RS08820 NZ_CP085478.1 Protein Homology CDS 1823164 1824951 . + 0 ID=cds-WP_002911479.1;Parent=gene-LI478_RS08820;Dbxref=Genbank:WP_002911479.1;Name=WP_002911479.1;Ontology_term=GO:0006422,GO:0004815,GO:0005737;gbkey=CDS;gene=aspS;go_component=cytoplasm|0005737||IEA;go_function=aspartate-tRNA ligase activity|0004815||IEA;go_process=aspartyl-tRNA aminoacylation|0006422||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227701.1;locus_tag=LI478_RS08820;product=aspartate--tRNA ligase;protein_id=WP_002911479.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1824953 1825396 . + . ID=gene-LI478_RS08825;Name=nudB;gbkey=Gene;gene=nudB;gene_biotype=protein_coding;locus_tag=LI478_RS08825 NZ_CP085478.1 Protein Homology CDS 1824953 1825396 . + 0 ID=cds-WP_002911477.1;Parent=gene-LI478_RS08825;Dbxref=Genbank:WP_002911477.1;Name=WP_002911477.1;Ontology_term=GO:0046656,GO:0008828,GO:0019177;gbkey=CDS;gene=nudB;go_function=dATP diphosphatase activity|0008828||IEA,dihydroneopterin triphosphate pyrophosphohydrolase activity|0019177||IEA;go_process=folic acid biosynthetic process|0046656||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227700.1;locus_tag=LI478_RS08825;product=dihydroneopterin triphosphate diphosphatase;protein_id=WP_002911477.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1825424 1826164 . + . ID=gene-LI478_RS08830;Name=LI478_RS08830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS08830 NZ_CP085478.1 Protein Homology CDS 1825424 1826164 . + 0 ID=cds-WP_002911459.1;Parent=gene-LI478_RS08830;Dbxref=Genbank:WP_002911459.1;Name=WP_002911459.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000907250.1;locus_tag=LI478_RS08830;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WP_002911459.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1826199 1826720 . + . ID=gene-LI478_RS08835;Name=ruvC;gbkey=Gene;gene=ruvC;gene_biotype=protein_coding;locus_tag=LI478_RS08835 NZ_CP085478.1 Protein Homology CDS 1826199 1826720 . + 0 ID=cds-WP_021467157.1;Parent=gene-LI478_RS08835;Dbxref=Genbank:WP_021467157.1;Name=WP_021467157.1;Ontology_term=GO:0006310,GO:0008821;gbkey=CDS;gene=ruvC;go_function=crossover junction endodeoxyribonuclease activity|0008821||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005068993.1;locus_tag=LI478_RS08835;product=crossover junction endodeoxyribonuclease RuvC;protein_id=WP_021467157.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1826800 1827411 . + . ID=gene-LI478_RS08840;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=LI478_RS08840 NZ_CP085478.1 Protein Homology CDS 1826800 1827411 . + 0 ID=cds-WP_227394179.1;Parent=gene-LI478_RS08840;Dbxref=Genbank:WP_227394179.1;Name=WP_227394179.1;Ontology_term=GO:0006310,GO:0009378,GO:0009379;gbkey=CDS;gene=ruvA;go_component=Holliday junction helicase complex|0009379||IEA;go_function=four-way junction helicase activity|0009378||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012131997.1;locus_tag=LI478_RS08840;product=Holliday junction branch migration protein RuvA;protein_id=WP_227394179.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1827420 1828430 . + . ID=gene-LI478_RS08845;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=LI478_RS08845 NZ_CP085478.1 Protein Homology CDS 1827420 1828430 . + 0 ID=cds-WP_004148860.1;Parent=gene-LI478_RS08845;Dbxref=Genbank:WP_004148860.1;Name=WP_004148860.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0005524,GO:0009378;gbkey=CDS;gene=ruvB;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227696.1;locus_tag=LI478_RS08845;product=Holliday junction branch migration DNA helicase RuvB;protein_id=WP_004148860.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1828494 1829279 . - . ID=gene-LI478_RS08850;Name=znuB;gbkey=Gene;gene=znuB;gene_biotype=protein_coding;locus_tag=LI478_RS08850 NZ_CP085478.1 Protein Homology CDS 1828494 1829279 . - 0 ID=cds-WP_002911451.1;Parent=gene-LI478_RS08850;Dbxref=Genbank:WP_002911451.1;Name=WP_002911451.1;Ontology_term=GO:0055085,GO:0042626;gbkey=CDS;gene=znuB;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227695.1;locus_tag=LI478_RS08850;product=zinc ABC transporter permease subunit ZnuB;protein_id=WP_002911451.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1829279 1829998 . - . ID=gene-LI478_RS08855;Name=znuC;gbkey=Gene;gene=znuC;gene_biotype=protein_coding;locus_tag=LI478_RS08855 NZ_CP085478.1 Protein Homology CDS 1829279 1829998 . - 0 ID=cds-WP_004197828.1;Parent=gene-LI478_RS08855;Dbxref=Genbank:WP_004197828.1;Name=WP_004197828.1;Ontology_term=GO:0006829,GO:0005524,GO:0015633;gbkey=CDS;gene=znuC;go_function=ATP binding|0005524||IEA,ABC-type zinc transporter activity|0015633||IEA;go_process=zinc ion transport|0006829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227694.1;locus_tag=LI478_RS08855;product=zinc ABC transporter ATP-binding protein ZnuC;protein_id=WP_004197828.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1830110 1831054 . + . ID=gene-LI478_RS08860;Name=znuA;gbkey=Gene;gene=znuA;gene_biotype=protein_coding;locus_tag=LI478_RS08860 NZ_CP085478.1 Protein Homology CDS 1830110 1831054 . + 0 ID=cds-WP_004180437.1;Parent=gene-LI478_RS08860;Dbxref=Genbank:WP_004180437.1;Name=WP_004180437.1;Ontology_term=GO:0006829,GO:0046872;gbkey=CDS;gene=znuA;go_function=metal ion binding|0046872||IEA;go_process=zinc ion transport|0006829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227693.1;locus_tag=LI478_RS08860;product=zinc ABC transporter substrate-binding protein ZnuA;protein_id=WP_004180437.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1831070 1832389 . + . ID=gene-LI478_RS08865;Name=mepM;gbkey=Gene;gene=mepM;gene_biotype=protein_coding;locus_tag=LI478_RS08865 NZ_CP085478.1 Protein Homology CDS 1831070 1832389 . + 0 ID=cds-WP_002911444.1;Parent=gene-LI478_RS08865;Dbxref=Genbank:WP_002911444.1;Name=WP_002911444.1;Ontology_term=GO:0042834;gbkey=CDS;gene=mepM;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227692.1;locus_tag=LI478_RS08865;product=murein DD-endopeptidase MepM;protein_id=WP_002911444.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1832507 1833481 . + . ID=gene-LI478_RS08870;Name=lpxM;gbkey=Gene;gene=lpxM;gene_biotype=protein_coding;gene_synonym=msbB;locus_tag=LI478_RS08870 NZ_CP085478.1 Protein Homology CDS 1832507 1833481 . + 0 ID=cds-WP_002911442.1;Parent=gene-LI478_RS08870;Dbxref=Genbank:WP_002911442.1;Name=WP_002911442.1;Note=LpxM is lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase%2C an enzyme characterized in Escherichia coli and involved in biosynthesis of the form of lipid A found in that species and some closely related species.;Ontology_term=GO:0009245,GO:0016746;gbkey=CDS;gene=lpxM;go_function=acyltransferase activity|0016746||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227691.1;locus_tag=LI478_RS08870;product=lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase;protein_id=WP_002911442.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1833522 1834964 . - . ID=gene-LI478_RS08875;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=LI478_RS08875 NZ_CP085478.1 Protein Homology CDS 1833522 1834964 . - 0 ID=cds-WP_002911440.1;Parent=gene-LI478_RS08875;Dbxref=Genbank:WP_002911440.1;Name=WP_002911440.1;Ontology_term=GO:0006096,GO:0004743,GO:0005737;gbkey=CDS;gene=pyk;go_component=cytoplasm|0005737||IEA;go_function=pyruvate kinase activity|0004743||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120709.1;locus_tag=LI478_RS08875;product=pyruvate kinase;protein_id=WP_002911440.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1835090 1835995 . - . ID=gene-LI478_RS08880;Name=LI478_RS08880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS08880 NZ_CP085478.1 Protein Homology CDS 1835090 1835995 . - 0 ID=cds-WP_004145555.1;Parent=gene-LI478_RS08880;Dbxref=Genbank:WP_004145555.1;Name=WP_004145555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227689.1;locus_tag=LI478_RS08880;product=MurR/RpiR family transcriptional regulator;protein_id=WP_004145555.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1836155 1836304 . + . ID=gene-LI478_RS08885;Name=LI478_RS08885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS08885 NZ_CP085478.1 Protein Homology CDS 1836155 1836304 . + 0 ID=cds-WP_004145554.1;Parent=gene-LI478_RS08885;Dbxref=Genbank:WP_004145554.1;Name=WP_004145554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227688.1;locus_tag=LI478_RS08885;product=hypothetical protein;protein_id=WP_004145554.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1836315 1837790 . + . ID=gene-LI478_RS08890;Name=zwf;gbkey=Gene;gene=zwf;gene_biotype=protein_coding;locus_tag=LI478_RS08890 NZ_CP085478.1 Protein Homology CDS 1836315 1837790 . + 0 ID=cds-WP_002911427.1;Parent=gene-LI478_RS08890;Dbxref=Genbank:WP_002911427.1;Name=WP_002911427.1;Ontology_term=GO:0006098,GO:0004345;gbkey=CDS;gene=zwf;go_function=glucose-6-phosphate dehydrogenase activity|0004345||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120712.1;locus_tag=LI478_RS08890;product=glucose-6-phosphate dehydrogenase;protein_id=WP_002911427.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1838013 1839824 . + . ID=gene-LI478_RS08895;Name=edd;gbkey=Gene;gene=edd;gene_biotype=protein_coding;locus_tag=LI478_RS08895 NZ_CP085478.1 Protein Homology CDS 1838013 1839824 . + 0 ID=cds-WP_032102649.1;Parent=gene-LI478_RS08895;Dbxref=Genbank:WP_032102649.1;Name=WP_032102649.1;Ontology_term=GO:0009255,GO:0004456;gbkey=CDS;gene=edd;go_function=phosphogluconate dehydratase activity|0004456||IEA;go_process=Entner-Doudoroff pathway through 6-phosphogluconate|0009255||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310588.1;locus_tag=LI478_RS08895;product=phosphogluconate dehydratase;protein_id=WP_032102649.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1839863 1840504 . + . ID=gene-LI478_RS08900;Name=LI478_RS08900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS08900 NZ_CP085478.1 Protein Homology CDS 1839863 1840504 . + 0 ID=cds-WP_002911423.1;Parent=gene-LI478_RS08900;Dbxref=Genbank:WP_002911423.1;Name=WP_002911423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227683.1;locus_tag=LI478_RS08900;product=bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=WP_002911423.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1840561 1841739 . - . ID=gene-LI478_RS08905;Name=purT;gbkey=Gene;gene=purT;gene_biotype=protein_coding;locus_tag=LI478_RS08905 NZ_CP085478.1 Protein Homology CDS 1840561 1841739 . - 0 ID=cds-WP_004151450.1;Parent=gene-LI478_RS08905;Dbxref=Genbank:WP_004151450.1;Name=WP_004151450.1;Ontology_term=GO:0009152,GO:0000287,GO:0004644,GO:0005524;gbkey=CDS;gene=purT;go_function=magnesium ion binding|0000287||IEA,phosphoribosylglycinamide formyltransferase activity|0004644||IEA,ATP binding|0005524||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227682.1;locus_tag=LI478_RS08905;product=formate-dependent phosphoribosylglycinamide formyltransferase;protein_id=WP_004151450.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1841884 1842231 . + . ID=gene-LI478_RS08910;Name=LI478_RS08910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS08910 NZ_CP085478.1 Protein Homology CDS 1841884 1842231 . + 0 ID=cds-WP_004184662.1;Parent=gene-LI478_RS08910;Dbxref=Genbank:WP_004184662.1;Name=WP_004184662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227681.1;locus_tag=LI478_RS08910;product=YebG family protein;protein_id=WP_004184662.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1842371 1843030 . + . ID=gene-LI478_RS08915;Name=LI478_RS08915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS08915 NZ_CP085478.1 Protein Homology CDS 1842371 1843030 . + 0 ID=cds-WP_004180434.1;Parent=gene-LI478_RS08915;Dbxref=Genbank:WP_004180434.1;Name=WP_004180434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227680.1;locus_tag=LI478_RS08915;product=tellurite resistance TerB family protein;protein_id=WP_004180434.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1843151 1845211 . + . ID=gene-LI478_RS08920;Name=ptrB;gbkey=Gene;gene=ptrB;gene_biotype=protein_coding;locus_tag=LI478_RS08920 NZ_CP085478.1 Protein Homology CDS 1843151 1845211 . + 0 ID=cds-WP_004151449.1;Parent=gene-LI478_RS08920;Dbxref=Genbank:WP_004151449.1;Name=WP_004151449.1;gbkey=CDS;gene=ptrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008804266.1;locus_tag=LI478_RS08920;product=oligopeptidase B;protein_id=WP_004151449.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1845215 1845874 . - . ID=gene-LI478_RS08925;Name=exoX;gbkey=Gene;gene=exoX;gene_biotype=protein_coding;locus_tag=LI478_RS08925 NZ_CP085478.1 Protein Homology CDS 1845215 1845874 . - 0 ID=cds-WP_002911407.1;Parent=gene-LI478_RS08925;Dbxref=Genbank:WP_002911407.1;Name=WP_002911407.1;gbkey=CDS;gene=exoX;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227677.1;locus_tag=LI478_RS08925;product=exodeoxyribonuclease X;protein_id=WP_002911407.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1845953 1846183 . - . ID=gene-LI478_RS08930;Name=LI478_RS08930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS08930 NZ_CP085478.1 Protein Homology CDS 1845953 1846183 . - 0 ID=cds-WP_002911406.1;Parent=gene-LI478_RS08930;Dbxref=Genbank:WP_002911406.1;Name=WP_002911406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227676.1;locus_tag=LI478_RS08930;product=DNA polymerase III subunit theta;protein_id=WP_002911406.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1846296 1846670 . + . ID=gene-LI478_RS08935;Name=yobA;gbkey=Gene;gene=yobA;gene_biotype=protein_coding;locus_tag=LI478_RS08935 NZ_CP085478.1 Protein Homology CDS 1846296 1846670 . + 0 ID=cds-WP_004151448.1;Parent=gene-LI478_RS08935;Dbxref=Genbank:WP_004151448.1;Name=WP_004151448.1;Ontology_term=GO:0006825,GO:0005507;gbkey=CDS;gene=yobA;go_function=copper ion binding|0005507||IEA;go_process=copper ion transport|0006825||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227675.1;locus_tag=LI478_RS08935;product=CopC domain-containing protein YobA;protein_id=WP_004151448.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1846674 1847543 . + . ID=gene-LI478_RS08940;Name=copD;gbkey=Gene;gene=copD;gene_biotype=protein_coding;locus_tag=LI478_RS08940 NZ_CP085478.1 Protein Homology CDS 1846674 1847543 . + 0 ID=cds-WP_048331959.1;Parent=gene-LI478_RS08940;Dbxref=Genbank:WP_048331959.1;Name=WP_048331959.1;Ontology_term=GO:0006825,GO:0016020;gbkey=CDS;gene=copD;go_component=membrane|0016020||IEA;go_process=copper ion transport|0006825||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227674.1;locus_tag=LI478_RS08940;product=copper homeostasis membrane protein CopD;protein_id=WP_048331959.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1847560 1847898 . + . ID=gene-LI478_RS08945;Name=LI478_RS08945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS08945 NZ_CP085478.1 Protein Homology CDS 1847560 1847898 . + 0 ID=cds-WP_016529031.1;Parent=gene-LI478_RS08945;Dbxref=Genbank:WP_016529031.1;Name=WP_016529031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227673.1;locus_tag=LI478_RS08945;product=YebY family protein;protein_id=WP_016529031.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1848535 1848678 . - . ID=gene-LI478_RS08950;Name=LI478_RS08950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS08950 NZ_CP085478.1 Protein Homology CDS 1848535 1848678 . - 0 ID=cds-WP_002911398.1;Parent=gene-LI478_RS08950;Dbxref=Genbank:WP_002911398.1;Name=WP_002911398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227672.1;locus_tag=LI478_RS08950;product=Ecr family regulatory small membrane protein;protein_id=WP_002911398.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1848783 1849751 . - . ID=gene-LI478_RS08955;Name=LI478_RS08955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS08955 NZ_CP085478.1 Protein Homology CDS 1848783 1849751 . - 0 ID=cds-WP_074185275.1;Parent=gene-LI478_RS08955;Dbxref=Genbank:WP_074185275.1;Name=WP_074185275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227671.1;locus_tag=LI478_RS08955;product=VirK/YbjX family protein;protein_id=WP_074185275.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1849908 1850561 . + . ID=gene-LI478_RS08960;Name=pphA;gbkey=Gene;gene=pphA;gene_biotype=protein_coding;locus_tag=LI478_RS08960 NZ_CP085478.1 Protein Homology CDS 1849908 1850561 . + 0 ID=cds-WP_032447686.1;Parent=gene-LI478_RS08960;Dbxref=Genbank:WP_032447686.1;Name=WP_032447686.1;Ontology_term=GO:0016787;gbkey=CDS;gene=pphA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227670.1;locus_tag=LI478_RS08960;product=protein-serine/threonine phosphatase;protein_id=WP_032447686.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1850558 1850749 . - . ID=gene-LI478_RS08965;Name=LI478_RS08965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS08965 NZ_CP085478.1 Protein Homology CDS 1850558 1850749 . - 0 ID=cds-WP_002911395.1;Parent=gene-LI478_RS08965;Dbxref=Genbank:WP_002911395.1;Name=WP_002911395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227669.1;locus_tag=LI478_RS08965;product=YebW family protein;protein_id=WP_002911395.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1850847 1851086 . - . ID=gene-LI478_RS08970;Name=LI478_RS08970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS08970 NZ_CP085478.1 Protein Homology CDS 1850847 1851086 . - 0 ID=cds-WP_002911393.1;Parent=gene-LI478_RS08970;Dbxref=Genbank:WP_002911393.1;Name=WP_002911393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015705939.1;locus_tag=LI478_RS08970;product=YebV family protein;protein_id=WP_002911393.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1851202 1852635 . - . ID=gene-LI478_RS08975;Name=rsmF;gbkey=Gene;gene=rsmF;gene_biotype=protein_coding;locus_tag=LI478_RS08975 NZ_CP085478.1 Protein Homology CDS 1851202 1852635 . - 0 ID=cds-WP_004148845.1;Parent=gene-LI478_RS08975;Dbxref=Genbank:WP_004148845.1;Name=WP_004148845.1;Ontology_term=GO:0001510,GO:0003723,GO:0008649;gbkey=CDS;gene=rsmF;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227667.1;locus_tag=LI478_RS08975;product=16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF;protein_id=WP_004148845.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1852759 1855392 . - . ID=gene-LI478_RS08980;Name=LI478_RS08980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS08980 NZ_CP085478.1 Protein Homology CDS 1852759 1855392 . - 0 ID=cds-WP_002911388.1;Parent=gene-LI478_RS08980;Dbxref=Genbank:WP_002911388.1;Name=WP_002911388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227666.1;locus_tag=LI478_RS08980;product=PqiB family protein;protein_id=WP_002911388.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1855361 1856644 . - . ID=gene-LI478_RS08985;Name=yebS;gbkey=Gene;gene=yebS;gene_biotype=protein_coding;locus_tag=LI478_RS08985 NZ_CP085478.1 Protein Homology CDS 1855361 1856644 . - 0 ID=cds-WP_002911387.1;Parent=gene-LI478_RS08985;Dbxref=Genbank:WP_002911387.1;Name=WP_002911387.1;gbkey=CDS;gene=yebS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227665.1;locus_tag=LI478_RS08985;product=membrane integrity lipid transport subunit YebS;protein_id=WP_002911387.1;transl_table=11 NZ_CP085478.1 RefSeq pseudogene 1856777 1857290 . + . ID=gene-LI478_RS08990;Name=LI478_RS08990;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS08990;pseudo=true NZ_CP085478.1 Protein Homology CDS 1856777 1857290 . + 0 ID=cds-LI478_RS08990;Parent=gene-LI478_RS08990;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227664.1;locus_tag=LI478_RS08990;product=GAF domain-containing protein;pseudo=true;transl_table=11 NZ_CP085478.1 RefSeq gene 1857372 1858049 . + . ID=gene-LI478_RS08995;Name=proQ;gbkey=Gene;gene=proQ;gene_biotype=protein_coding;locus_tag=LI478_RS08995 NZ_CP085478.1 Protein Homology CDS 1857372 1858049 . + 0 ID=cds-WP_002911385.1;Parent=gene-LI478_RS08995;Dbxref=Genbank:WP_002911385.1;Name=WP_002911385.1;Ontology_term=GO:0010608,GO:0003723,GO:0033592,GO:0034057;gbkey=CDS;gene=proQ;go_function=RNA binding|0003723||IEA,RNA strand annealing activity|0033592||IEA,RNA strand-exchange activity|0034057||IEA;go_process=post-transcriptional regulation of gene expression|0010608||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227663.1;locus_tag=LI478_RS08995;product=RNA chaperone ProQ;protein_id=WP_002911385.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1858069 1860117 . + . ID=gene-LI478_RS09000;Name=prc;gbkey=Gene;gene=prc;gene_biotype=protein_coding;locus_tag=LI478_RS09000 NZ_CP085478.1 Protein Homology CDS 1858069 1860117 . + 0 ID=cds-WP_004145536.1;Parent=gene-LI478_RS09000;Dbxref=Genbank:WP_004145536.1;Name=WP_004145536.1;Ontology_term=GO:0006508,GO:0005515,GO:0008236;gbkey=CDS;gene=prc;go_function=protein binding|0005515||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227662.1;locus_tag=LI478_RS09000;product=carboxy terminal-processing peptidase;protein_id=WP_004145536.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1860353 1861237 . + . ID=gene-LI478_RS09005;Name=htpX;gbkey=Gene;gene=htpX;gene_biotype=protein_coding;locus_tag=LI478_RS09005 NZ_CP085478.1 Protein Homology CDS 1860353 1861237 . + 0 ID=cds-WP_002911381.1;Parent=gene-LI478_RS09005;Dbxref=Genbank:WP_002911381.1;Name=WP_002911381.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=htpX;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229823.1;locus_tag=LI478_RS09005;product=protease HtpX;protein_id=WP_002911381.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1861303 1862673 . - . ID=gene-LI478_RS09010;Name=LI478_RS09010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS09010 NZ_CP085478.1 Protein Homology CDS 1861303 1862673 . - 0 ID=cds-WP_002911379.1;Parent=gene-LI478_RS09010;Dbxref=Genbank:WP_002911379.1;Name=WP_002911379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004175444.1;locus_tag=LI478_RS09010;product=MFS transporter;protein_id=WP_002911379.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1862851 1863642 . + . ID=gene-LI478_RS09015;Name=kdgR;gbkey=Gene;gene=kdgR;gene_biotype=protein_coding;locus_tag=LI478_RS09015 NZ_CP085478.1 Protein Homology CDS 1862851 1863642 . + 0 ID=cds-WP_002911378.1;Parent=gene-LI478_RS09015;Dbxref=Genbank:WP_002911378.1;Name=WP_002911378.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=kdgR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227659.1;locus_tag=LI478_RS09015;product=DNA-binding transcriptional regulator KdgR;protein_id=WP_002911378.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1863700 1863939 . - . ID=gene-LI478_RS09020;Name=LI478_RS09020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS09020 NZ_CP085478.1 Protein Homology CDS 1863700 1863939 . - 0 ID=cds-WP_004145533.1;Parent=gene-LI478_RS09020;Dbxref=Genbank:WP_004145533.1;Name=WP_004145533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227658.1;locus_tag=LI478_RS09020;product=YobH family protein;protein_id=WP_004145533.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1864099 1864242 . + . ID=gene-LI478_RS09025;Name=mgrB;gbkey=Gene;gene=mgrB;gene_biotype=protein_coding;locus_tag=LI478_RS09025 NZ_CP085478.1 Protein Homology CDS 1864099 1864242 . + 0 ID=cds-WP_002911375.1;Parent=gene-LI478_RS09025;Dbxref=Genbank:WP_002911375.1;Name=WP_002911375.1;gbkey=CDS;gene=mgrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015366032.1;locus_tag=LI478_RS09025;product=PhoP/PhoQ regulator MgrB;protein_id=WP_002911375.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1864317 1864607 . + . ID=gene-LI478_RS09030;Name=LI478_RS09030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS09030 NZ_CP085478.1 Protein Homology CDS 1864317 1864607 . + 0 ID=cds-WP_002911374.1;Parent=gene-LI478_RS09030;Dbxref=Genbank:WP_002911374.1;Name=WP_002911374.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227656.1;locus_tag=LI478_RS09030;product=YebO family protein;protein_id=WP_002911374.1;transl_table=11 NZ_CP085478.1 RefSeq pseudogene 1865198 1865269 . + . ID=gene-LI478_RS09035;Name=LI478_RS09035;end_range=1865269,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS09035;partial=true;pseudo=true NZ_CP085478.1 Protein Homology CDS 1865198 1865269 . + 0 ID=cds-LI478_RS09035;Parent=gene-LI478_RS09035;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1865269,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416338.1;locus_tag=LI478_RS09035;partial=true;product=DUF2627 domain-containing protein;pseudo=true;transl_table=11 NZ_CP085478.1 RefSeq gene 1865355 1865564 . + . ID=gene-LI478_RS09040;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=LI478_RS09040 NZ_CP085478.1 Protein Homology CDS 1865355 1865564 . + 0 ID=cds-WP_001062678.1;Parent=gene-LI478_RS09040;Dbxref=Genbank:WP_001062678.1;Name=WP_001062678.1;gbkey=CDS;gene=cspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310560.1;locus_tag=LI478_RS09040;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_001062678.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1865752 1867500 . + . ID=gene-LI478_RS09045;Name=ftsI;gbkey=Gene;gene=ftsI;gene_biotype=protein_coding;locus_tag=LI478_RS09045 NZ_CP085478.1 Protein Homology CDS 1865752 1867500 . + 0 ID=cds-WP_002910924.1;Parent=gene-LI478_RS09045;Dbxref=Genbank:WP_002910924.1;Name=WP_002910924.1;Ontology_term=GO:0009252,GO:0051301,GO:0008658,GO:0008955,GO:0005886;gbkey=CDS;gene=ftsI;go_component=plasma membrane|0005886||IEA;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227653.1;locus_tag=LI478_RS09045;product=peptidoglycan glycosyltransferase FtsI;protein_id=WP_002910924.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1867562 1868356 . + . ID=gene-LI478_RS09050;Name=rlmA;gbkey=Gene;gene=rlmA;gene_biotype=protein_coding;locus_tag=LI478_RS09050 NZ_CP085478.1 Protein Homology CDS 1867562 1868356 . + 0 ID=cds-WP_064153311.1;Parent=gene-LI478_RS09050;Dbxref=Genbank:WP_064153311.1;Name=WP_064153311.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rlmA;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227652.1;locus_tag=LI478_RS09050;product=23S rRNA (guanine(745)-N(1))-methyltransferase;protein_id=WP_064153311.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1868360 1868926 . - . ID=gene-LI478_RS09055;Name=mntP;gbkey=Gene;gene=mntP;gene_biotype=protein_coding;locus_tag=LI478_RS09055 NZ_CP085478.1 Protein Homology CDS 1868360 1868926 . - 0 ID=cds-WP_021312761.1;Parent=gene-LI478_RS09055;Dbxref=Genbank:WP_021312761.1;Name=WP_021312761.1;gbkey=CDS;gene=mntP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227651.1;locus_tag=LI478_RS09055;product=manganese efflux pump MntP;protein_id=WP_021312761.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1869345 1869803 . - . ID=gene-LI478_RS09060;Name=LI478_RS09060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS09060 NZ_CP085478.1 Protein Homology CDS 1869345 1869803 . - 0 ID=cds-WP_002910920.1;Parent=gene-LI478_RS09060;Dbxref=Genbank:WP_002910920.1;Name=WP_002910920.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227650.1;locus_tag=LI478_RS09060;product=DUF986 family protein;protein_id=WP_002910920.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1869866 1870717 . - . ID=gene-LI478_RS09065;Name=LI478_RS09065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS09065 NZ_CP085478.1 Protein Homology CDS 1869866 1870717 . - 0 ID=cds-WP_004145526.1;Parent=gene-LI478_RS09065;Dbxref=Genbank:WP_004145526.1;Name=WP_004145526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020804907.1;locus_tag=LI478_RS09065;product=PTS mannose transporter subunit IID;protein_id=WP_004145526.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1870730 1871530 . - . ID=gene-LI478_RS09070;Name=LI478_RS09070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS09070 NZ_CP085478.1 Protein Homology CDS 1870730 1871530 . - 0 ID=cds-WP_002910918.1;Parent=gene-LI478_RS09070;Dbxref=Genbank:WP_002910918.1;Name=WP_002910918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910918.1;locus_tag=LI478_RS09070;product=PTS mannose/fructose/sorbose transporter subunit IIC;protein_id=WP_002910918.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1871587 1872558 . - . ID=gene-LI478_RS09075;Name=manX;gbkey=Gene;gene=manX;gene_biotype=protein_coding;locus_tag=LI478_RS09075 NZ_CP085478.1 Protein Homology CDS 1871587 1872558 . - 0 ID=cds-WP_002910917.1;Parent=gene-LI478_RS09075;Dbxref=Genbank:WP_002910917.1;Name=WP_002910917.1;Ontology_term=GO:0009401,GO:0008982;gbkey=CDS;gene=manX;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227647.1;locus_tag=LI478_RS09075;product=PTS mannose transporter subunit IIAB;protein_id=WP_002910917.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1873005 1874564 . + . ID=gene-LI478_RS09080;Name=yoaE;gbkey=Gene;gene=yoaE;gene_biotype=protein_coding;locus_tag=LI478_RS09080 NZ_CP085478.1 Protein Homology CDS 1873005 1874564 . + 0 ID=cds-WP_004145524.1;Parent=gene-LI478_RS09080;Dbxref=Genbank:WP_004145524.1;Name=WP_004145524.1;gbkey=CDS;gene=yoaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310552.1;locus_tag=LI478_RS09080;product=CNNM family cation transport protein YoaE;protein_id=WP_004145524.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1874598 1876181 . - . ID=gene-LI478_RS09085;Name=LI478_RS09085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS09085 NZ_CP085478.1 Protein Homology CDS 1874598 1876181 . - 0 ID=cds-WP_032416254.1;Parent=gene-LI478_RS09085;Dbxref=Genbank:WP_032416254.1;Name=WP_032416254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227645.1;locus_tag=LI478_RS09085;product=EAL domain-containing protein;protein_id=WP_032416254.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1876364 1877728 . - . ID=gene-LI478_RS09090;Name=sdaA;gbkey=Gene;gene=sdaA;gene_biotype=protein_coding;locus_tag=LI478_RS09090 NZ_CP085478.1 Protein Homology CDS 1876364 1877728 . - 0 ID=cds-WP_004151445.1;Parent=gene-LI478_RS09090;Dbxref=Genbank:WP_004151445.1;Name=WP_004151445.1;gbkey=CDS;gene=sdaA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227643.1;locus_tag=LI478_RS09090;product=L-serine ammonia-lyase;protein_id=WP_004151445.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1877891 1878469 . - . ID=gene-LI478_RS09095;Name=LI478_RS09095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS09095 NZ_CP085478.1 Protein Homology CDS 1877891 1878469 . - 0 ID=cds-WP_032432438.1;Parent=gene-LI478_RS09095;Dbxref=Genbank:WP_032432438.1;Name=WP_032432438.1;Ontology_term=GO:0000287,GO:0010945;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,CoA pyrophosphatase activity|0010945||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227642.1;locus_tag=LI478_RS09095;product=CoA pyrophosphatase;protein_id=WP_032432438.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1878473 1879828 . - . ID=gene-LI478_RS09100;Name=pabB;gbkey=Gene;gene=pabB;gene_biotype=protein_coding;locus_tag=LI478_RS09100 NZ_CP085478.1 Protein Homology CDS 1878473 1879828 . - 0 ID=cds-WP_004145520.1;Parent=gene-LI478_RS09100;Dbxref=Genbank:WP_004145520.1;Name=WP_004145520.1;Ontology_term=GO:0009396;gbkey=CDS;gene=pabB;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227641.1;locus_tag=LI478_RS09100;product=aminodeoxychorismate synthase component 1;protein_id=WP_004145520.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1879917 1880102 . + . ID=gene-LI478_RS09105;Name=LI478_RS09105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS09105 NZ_CP085478.1 Protein Homology CDS 1879917 1880102 . + 0 ID=cds-WP_004145519.1;Parent=gene-LI478_RS09105;Dbxref=Genbank:WP_004145519.1;Name=WP_004145519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227640.1;locus_tag=LI478_RS09105;product=YoaH family protein;protein_id=WP_004145519.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1880103 1880447 . - . ID=gene-LI478_RS09110;Name=LI478_RS09110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS09110 NZ_CP085478.1 Protein Homology CDS 1880103 1880447 . - 0 ID=cds-WP_002910910.1;Parent=gene-LI478_RS09110;Dbxref=Genbank:WP_002910910.1;Name=WP_002910910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227639.1;locus_tag=LI478_RS09110;product=RidA family protein;protein_id=WP_002910910.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1880578 1882488 . + . ID=gene-LI478_RS09115;Name=LI478_RS09115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS09115 NZ_CP085478.1 Protein Homology CDS 1880578 1882488 . + 0 ID=cds-WP_004175456.1;Parent=gene-LI478_RS09115;Dbxref=Genbank:WP_004175456.1;Name=WP_004175456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227638.1;locus_tag=LI478_RS09115;product=ATP-dependent DNA helicase;protein_id=WP_004175456.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1882634 1883329 . + . ID=gene-LI478_RS09120;Name=tsaB;gbkey=Gene;gene=tsaB;gene_biotype=protein_coding;locus_tag=LI478_RS09120 NZ_CP085478.1 Protein Homology CDS 1882634 1883329 . + 0 ID=cds-WP_004151443.1;Parent=gene-LI478_RS09120;Dbxref=Genbank:WP_004151443.1;Name=WP_004151443.1;Ontology_term=GO:0006400,GO:0003725;gbkey=CDS;gene=tsaB;go_function=double-stranded RNA binding|0003725||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227637.1;locus_tag=LI478_RS09120;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;protein_id=WP_004151443.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1883368 1883949 . + . ID=gene-LI478_RS09125;Name=LI478_RS09125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS09125 NZ_CP085478.1 Protein Homology CDS 1883368 1883949 . + 0 ID=cds-WP_002910905.1;Parent=gene-LI478_RS09125;Dbxref=Genbank:WP_002910905.1;Name=WP_002910905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227636.1;locus_tag=LI478_RS09125;product=Slp family lipoprotein;protein_id=WP_002910905.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1884155 1885840 . + . ID=gene-LI478_RS09130;Name=fadD;gbkey=Gene;gene=fadD;gene_biotype=protein_coding;locus_tag=LI478_RS09130 NZ_CP085478.1 Protein Homology CDS 1884155 1885840 . + 0 ID=cds-WP_064153335.1;Parent=gene-LI478_RS09130;Dbxref=Genbank:WP_064153335.1;Name=WP_064153335.1;gbkey=CDS;gene=fadD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122193.1;locus_tag=LI478_RS09130;product=long-chain-fatty-acid--CoA ligase FadD;protein_id=WP_064153335.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1885922 1887037 . + . ID=gene-LI478_RS09135;Name=rnd;gbkey=Gene;gene=rnd;gene_biotype=protein_coding;locus_tag=LI478_RS09135 NZ_CP085478.1 Protein Homology CDS 1885922 1887037 . + 0 ID=cds-WP_004148826.1;Parent=gene-LI478_RS09135;Dbxref=Genbank:WP_004148826.1;Name=WP_004148826.1;Ontology_term=GO:0008033,GO:0003676,GO:0008408,GO:0033890;gbkey=CDS;gene=rnd;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA,ribonuclease D activity|0033890||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227634.1;locus_tag=LI478_RS09135;product=ribonuclease D;protein_id=WP_004148826.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1887115 1887384 . - . ID=gene-LI478_RS09140;Name=minE;gbkey=Gene;gene=minE;gene_biotype=protein_coding;locus_tag=LI478_RS09140 NZ_CP085478.1 Protein Homology CDS 1887115 1887384 . - 0 ID=cds-WP_002910902.1;Parent=gene-LI478_RS09140;Dbxref=Genbank:WP_002910902.1;Name=WP_002910902.1;Ontology_term=GO:0032955;gbkey=CDS;gene=minE;go_process=regulation of division septum assembly|0032955||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227633.1;locus_tag=LI478_RS09140;product=cell division topological specificity factor MinE;protein_id=WP_002910902.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1887388 1888200 . - . ID=gene-LI478_RS09145;Name=minD;gbkey=Gene;gene=minD;gene_biotype=protein_coding;locus_tag=LI478_RS09145 NZ_CP085478.1 Protein Homology CDS 1887388 1888200 . - 0 ID=cds-WP_002910900.1;Parent=gene-LI478_RS09145;Dbxref=Genbank:WP_002910900.1;Name=WP_002910900.1;gbkey=CDS;gene=minD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020801817.1;locus_tag=LI478_RS09145;product=septum site-determining protein MinD;protein_id=WP_002910900.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1888224 1888922 . - . ID=gene-LI478_RS09150;Name=minC;gbkey=Gene;gene=minC;gene_biotype=protein_coding;locus_tag=LI478_RS09150 NZ_CP085478.1 Protein Homology CDS 1888224 1888922 . - 0 ID=cds-WP_002910899.1;Parent=gene-LI478_RS09150;Dbxref=Genbank:WP_002910899.1;Name=WP_002910899.1;Ontology_term=GO:0000918,GO:0004857;gbkey=CDS;gene=minC;go_function=enzyme inhibitor activity|0004857||IEA;go_process=division septum site selection|0000918||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227631.1;locus_tag=LI478_RS09150;product=septum site-determining protein MinC;protein_id=WP_002910899.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1889049 1889330 . + . ID=gene-LI478_RS09155;Name=LI478_RS09155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS09155 NZ_CP085478.1 Protein Homology CDS 1889049 1889330 . + 0 ID=cds-WP_002910898.1;Parent=gene-LI478_RS09155;Dbxref=Genbank:WP_002910898.1;Name=WP_002910898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910898.1;locus_tag=LI478_RS09155;product=YcgL domain-containing protein;protein_id=WP_002910898.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1889347 1890006 . + . ID=gene-LI478_RS09160;Name=LI478_RS09160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS09160 NZ_CP085478.1 Protein Homology CDS 1889347 1890006 . + 0 ID=cds-WP_004189297.1;Parent=gene-LI478_RS09160;Dbxref=Genbank:WP_004189297.1;Name=WP_004189297.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227628.1;locus_tag=LI478_RS09160;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_004189297.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1890101 1890547 . + . ID=gene-LI478_RS09165;Name=LI478_RS09165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS09165 NZ_CP085478.1 Protein Homology CDS 1890101 1890547 . + 0 ID=cds-WP_002910896.1;Parent=gene-LI478_RS09165;Dbxref=Genbank:WP_002910896.1;Name=WP_002910896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227627.1;locus_tag=LI478_RS09165;product=YcgN family cysteine cluster protein;protein_id=WP_002910896.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1890554 1890898 . - . ID=gene-LI478_RS09170;Name=LI478_RS09170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS09170 NZ_CP085478.1 Protein Homology CDS 1890554 1890898 . - 0 ID=cds-WP_002910895.1;Parent=gene-LI478_RS09170;Dbxref=Genbank:WP_002910895.1;Name=WP_002910895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227626.1;locus_tag=LI478_RS09170;product=DUF1971 domain-containing protein;protein_id=WP_002910895.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1891062 1891592 . - . ID=gene-LI478_RS09175;Name=dsbB;gbkey=Gene;gene=dsbB;gene_biotype=protein_coding;locus_tag=LI478_RS09175 NZ_CP085478.1 Protein Homology CDS 1891062 1891592 . - 0 ID=cds-WP_002910894.1;Parent=gene-LI478_RS09175;Dbxref=Genbank:WP_002910894.1;Name=WP_002910894.1;Ontology_term=GO:0006457,GO:0015035,GO:0016020;gbkey=CDS;gene=dsbB;go_component=membrane|0016020||IEA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227625.1;locus_tag=LI478_RS09175;product=disulfide bond formation protein DsbB;protein_id=WP_002910894.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1891721 1893271 . - . ID=gene-LI478_RS09180;Name=nhaB;gbkey=Gene;gene=nhaB;gene_biotype=protein_coding;locus_tag=LI478_RS09180 NZ_CP085478.1 Protein Homology CDS 1891721 1893271 . - 0 ID=cds-WP_004151442.1;Parent=gene-LI478_RS09180;Dbxref=Genbank:WP_004151442.1;Name=WP_004151442.1;Ontology_term=GO:0006814,GO:0015385,GO:0016020;gbkey=CDS;gene=nhaB;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227624.1;locus_tag=LI478_RS09180;product=sodium/proton antiporter NhaB;protein_id=WP_004151442.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1893308 1893439 . + . ID=gene-LI478_RS26455;Name=LI478_RS26455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS26455 NZ_CP085478.1 Protein Homology CDS 1893308 1893439 . + 0 ID=cds-WP_004163532.1;Parent=gene-LI478_RS26455;Dbxref=Genbank:WP_004163532.1;Name=WP_004163532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004163532.1;locus_tag=LI478_RS26455;product=hypothetical protein;protein_id=WP_004163532.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1893520 1894239 . + . ID=gene-LI478_RS09185;Name=fadR;gbkey=Gene;gene=fadR;gene_biotype=protein_coding;locus_tag=LI478_RS09185 NZ_CP085478.1 Protein Homology CDS 1893520 1894239 . + 0 ID=cds-WP_002910890.1;Parent=gene-LI478_RS09185;Dbxref=Genbank:WP_002910890.1;Name=WP_002910890.1;Ontology_term=GO:0006355,GO:0019217,GO:0000062,GO:0003677,GO:0003700;gbkey=CDS;gene=fadR;go_function=fatty-acyl-CoA binding|0000062||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,regulation of fatty acid metabolic process|0019217||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227623.1;locus_tag=LI478_RS09185;product=fatty acid metabolism transcriptional regulator FadR;protein_id=WP_002910890.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1894314 1895846 . - . ID=gene-LI478_RS09190;Name=LI478_RS09190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS09190 NZ_CP085478.1 Protein Homology CDS 1894314 1895846 . - 0 ID=cds-WP_002910889.1;Parent=gene-LI478_RS09190;Dbxref=Genbank:WP_002910889.1;Name=WP_002910889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227622.1;locus_tag=LI478_RS09190;product=SpoVR family protein;protein_id=WP_002910889.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1895923 1896069 . + . ID=gene-LI478_RS09195;Name=LI478_RS09195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS09195 NZ_CP085478.1 Protein Homology CDS 1895923 1896069 . + 0 ID=cds-WP_064153333.1;Parent=gene-LI478_RS09195;Dbxref=Genbank:WP_064153333.1;Name=WP_064153333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227621.1;locus_tag=LI478_RS09195;product=hypothetical protein;protein_id=WP_064153333.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1896168 1897466 . + . ID=gene-LI478_RS09200;Name=LI478_RS09200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS09200 NZ_CP085478.1 Protein Homology CDS 1896168 1897466 . + 0 ID=cds-WP_064153309.1;Parent=gene-LI478_RS09200;Dbxref=Genbank:WP_064153309.1;Name=WP_064153309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309711.1;locus_tag=LI478_RS09200;product=D-amino acid dehydrogenase;protein_id=WP_064153309.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1897476 1898546 . + . ID=gene-LI478_RS09205;Name=dadX;gbkey=Gene;gene=dadX;gene_biotype=protein_coding;locus_tag=LI478_RS09205 NZ_CP085478.1 Protein Homology CDS 1897476 1898546 . + 0 ID=cds-WP_002910887.1;Parent=gene-LI478_RS09205;Dbxref=Genbank:WP_002910887.1;Name=WP_002910887.1;Ontology_term=GO:0006522,GO:0008784;gbkey=CDS;gene=dadX;go_function=alanine racemase activity|0008784||IEA;go_process=alanine metabolic process|0006522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227619.1;locus_tag=LI478_RS09205;product=catabolic alanine racemase DadX;protein_id=WP_002910887.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1898563 1900296 . - . ID=gene-LI478_RS09210;Name=LI478_RS09210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS09210 NZ_CP085478.1 Protein Homology CDS 1898563 1900296 . - 0 ID=cds-WP_002910885.1;Parent=gene-LI478_RS09210;Dbxref=Genbank:WP_002910885.1;Name=WP_002910885.1;Ontology_term=GO:0006813,GO:0006884,GO:0055085,GO:0005451,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=monovalent cation:proton antiporter activity|0005451||IEA;go_process=potassium ion transport|0006813||IEA,cell volume homeostasis|0006884||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227618.1;locus_tag=LI478_RS09210;product=potassium/proton antiporter;protein_id=WP_002910885.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1900389 1901303 . - . ID=gene-LI478_RS09215;Name=ldcA;gbkey=Gene;gene=ldcA;gene_biotype=protein_coding;locus_tag=LI478_RS09215 NZ_CP085478.1 Protein Homology CDS 1900389 1901303 . - 0 ID=cds-WP_009484352.1;Parent=gene-LI478_RS09215;Dbxref=Genbank:WP_009484352.1;Name=WP_009484352.1;gbkey=CDS;gene=ldcA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012541280.1;locus_tag=LI478_RS09215;product=muramoyltetrapeptide carboxypeptidase;protein_id=WP_009484352.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1901479 1902090 . + . ID=gene-LI478_RS09220;Name=emtA;gbkey=Gene;gene=emtA;gene_biotype=protein_coding;locus_tag=LI478_RS09220 NZ_CP085478.1 Protein Homology CDS 1901479 1902090 . + 0 ID=cds-WP_002910846.1;Parent=gene-LI478_RS09220;Dbxref=Genbank:WP_002910846.1;Name=WP_002910846.1;gbkey=CDS;gene=emtA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227615.1;locus_tag=LI478_RS09220;product=membrane-bound lytic murein transglycosylase EmtA;protein_id=WP_002910846.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1902132 1904252 . - . ID=gene-LI478_RS09225;Name=LI478_RS09225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS09225 NZ_CP085478.1 Protein Homology CDS 1902132 1904252 . - 0 ID=cds-WP_064153307.1;Parent=gene-LI478_RS09225;Dbxref=Genbank:WP_064153307.1;Name=WP_064153307.1;Ontology_term=GO:0015891,GO:0015343,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_function=siderophore-iron transmembrane transporter activity|0015343||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227614.1;locus_tag=LI478_RS09225;product=TonB-dependent siderophore receptor;protein_id=WP_064153307.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1904504 1906249 . - . ID=gene-LI478_RS09230;Name=LI478_RS09230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS09230 NZ_CP085478.1 Protein Homology CDS 1904504 1906249 . - 0 ID=cds-WP_032438235.1;Parent=gene-LI478_RS09230;Dbxref=Genbank:WP_032438235.1;Name=WP_032438235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227613.1;locus_tag=LI478_RS09230;product=alpha%2Calpha-trehalase;protein_id=WP_032438235.1;transl_table=11 NZ_CP085478.1 RefSeq pseudogene 1906434 1906562 . + . ID=gene-LI478_RS09235;Name=LI478_RS09235;end_range=1906562,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS09235;partial=true;pseudo=true NZ_CP085478.1 Protein Homology CDS 1906434 1906562 . + 0 ID=cds-LI478_RS09235;Parent=gene-LI478_RS09235;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1906562,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004151441.1;locus_tag=LI478_RS09235;partial=true;product=biopolymer transporter TonB;pseudo=true;transl_table=11 NZ_CP085478.1 RefSeq gene 1906634 1908073 . + . ID=gene-LI478_RS09240;Name=LI478_RS09240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS09240 NZ_CP085478.1 Protein Homology CDS 1906634 1908073 . + 0 ID=cds-WP_004180417.1;Parent=gene-LI478_RS09240;Dbxref=Genbank:WP_004180417.1;Name=WP_004180417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227612.1;locus_tag=LI478_RS09240;product=circularly permuted type 2 ATP-grasp protein;protein_id=WP_004180417.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1908067 1908996 . + . ID=gene-LI478_RS09245;Name=LI478_RS09245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS09245 NZ_CP085478.1 Protein Homology CDS 1908067 1908996 . + 0 ID=cds-WP_004184646.1;Parent=gene-LI478_RS09245;Dbxref=Genbank:WP_004184646.1;Name=WP_004184646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227611.1;locus_tag=LI478_RS09245;product=alpha-E domain-containing protein;protein_id=WP_004184646.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1908993 1909808 . + . ID=gene-LI478_RS09250;Name=LI478_RS09250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS09250 NZ_CP085478.1 Protein Homology CDS 1908993 1909808 . + 0 ID=cds-WP_004145495.1;Parent=gene-LI478_RS09250;Dbxref=Genbank:WP_004145495.1;Name=WP_004145495.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227610.1;locus_tag=LI478_RS09250;product=transglutaminase family protein;protein_id=WP_004145495.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1909825 1910571 . + . ID=gene-LI478_RS09255;Name=LI478_RS09255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS09255 NZ_CP085478.1 Protein Homology CDS 1909825 1910571 . + 0 ID=cds-WP_032415180.1;Parent=gene-LI478_RS09255;Dbxref=Genbank:WP_032415180.1;Name=WP_032415180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227609.1;locus_tag=LI478_RS09255;product=proteasome-type protease;protein_id=WP_032415180.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1911010 1911996 . + . ID=gene-LI478_RS09260;Name=LI478_RS09260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS09260 NZ_CP085478.1 Protein Homology CDS 1911010 1911996 . + 0 ID=cds-WP_032415179.1;Parent=gene-LI478_RS09260;Dbxref=Genbank:WP_032415179.1;Name=WP_032415179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227607.1;locus_tag=LI478_RS09260;product=fatty acid desaturase;protein_id=WP_032415179.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1911989 1912789 . + . ID=gene-LI478_RS09265;Name=LI478_RS09265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS09265 NZ_CP085478.1 Protein Homology CDS 1911989 1912789 . + 0 ID=cds-WP_016531139.1;Parent=gene-LI478_RS09265;Dbxref=Genbank:WP_016531139.1;Name=WP_016531139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227606.1;locus_tag=LI478_RS09265;product=PhnD/SsuA/transferrin family substrate-binding protein;protein_id=WP_016531139.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1912827 1912949 . - . ID=gene-LI478_RS09270;Name=LI478_RS09270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS09270 NZ_CP085478.1 Protein Homology CDS 1912827 1912949 . - 0 ID=cds-WP_004145488.1;Parent=gene-LI478_RS09270;Dbxref=Genbank:WP_004145488.1;Name=WP_004145488.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227605.1;locus_tag=LI478_RS09270;product=nitrilotriacetate monooxygenase;protein_id=WP_004145488.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1913247 1913390 . - . ID=gene-LI478_RS09275;Name=LI478_RS09275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS09275 NZ_CP085478.1 Protein Homology CDS 1913247 1913390 . - 0 ID=cds-WP_004219597.1;Parent=gene-LI478_RS09275;Dbxref=Genbank:WP_004219597.1;Name=WP_004219597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227604.1;locus_tag=LI478_RS09275;product=hypothetical protein;protein_id=WP_004219597.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1913567 1914508 . + . ID=gene-LI478_RS09280;Name=tdcA;gbkey=Gene;gene=tdcA;gene_biotype=protein_coding;locus_tag=LI478_RS09280 NZ_CP085478.1 Protein Homology CDS 1913567 1914508 . + 0 ID=cds-WP_002910764.1;Parent=gene-LI478_RS09280;Dbxref=Genbank:WP_002910764.1;Name=WP_002910764.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=tdcA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227603.1;locus_tag=LI478_RS09280;product=transcriptional regulator TdcA;protein_id=WP_002910764.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1914602 1915591 . + . ID=gene-LI478_RS09285;Name=tdcB;gbkey=Gene;gene=tdcB;gene_biotype=protein_coding;locus_tag=LI478_RS09285 NZ_CP085478.1 Protein Homology CDS 1914602 1915591 . + 0 ID=cds-WP_002910762.1;Parent=gene-LI478_RS09285;Dbxref=Genbank:WP_002910762.1;Name=WP_002910762.1;Ontology_term=GO:0006567,GO:0004794,GO:0030170;gbkey=CDS;gene=tdcB;go_function=L-threonine ammonia-lyase activity|0004794||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227602.1;locus_tag=LI478_RS09285;product=bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB;protein_id=WP_002910762.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1915617 1916948 . + . ID=gene-LI478_RS09290;Name=tdcC;gbkey=Gene;gene=tdcC;gene_biotype=protein_coding;locus_tag=LI478_RS09290 NZ_CP085478.1 Protein Homology CDS 1915617 1916948 . + 0 ID=cds-WP_004145486.1;Parent=gene-LI478_RS09290;Dbxref=Genbank:WP_004145486.1;Name=WP_004145486.1;gbkey=CDS;gene=tdcC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227601.1;locus_tag=LI478_RS09290;product=threonine/serine transporter TdcC;protein_id=WP_004145486.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1916976 1918184 . + . ID=gene-LI478_RS09295;Name=tdcD;gbkey=Gene;gene=tdcD;gene_biotype=protein_coding;locus_tag=LI478_RS09295 NZ_CP085478.1 Protein Homology CDS 1916976 1918184 . + 0 ID=cds-WP_002910759.1;Parent=gene-LI478_RS09295;Dbxref=Genbank:WP_002910759.1;Name=WP_002910759.1;Ontology_term=GO:0006082,GO:0016310,GO:0016301;gbkey=CDS;gene=tdcD;go_function=kinase activity|0016301||IEA;go_process=organic acid metabolic process|0006082||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227600.1;locus_tag=LI478_RS09295;product=propionate kinase;protein_id=WP_002910759.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1918213 1920507 . + . ID=gene-LI478_RS09300;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=protein_coding;locus_tag=LI478_RS09300 NZ_CP085478.1 Protein Homology CDS 1918213 1920507 . + 0 ID=cds-WP_064153304.1;Parent=gene-LI478_RS09300;Dbxref=Genbank:WP_064153304.1;Name=WP_064153304.1;Ontology_term=GO:0006113,GO:0015942,GO:0008861,GO:0005737;gbkey=CDS;gene=pflB;go_component=cytoplasm|0005737||IEA;go_function=formate C-acetyltransferase activity|0008861||IEA;go_process=fermentation|0006113||IEA,formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312021.1;locus_tag=LI478_RS09300;product=formate C-acetyltransferase;protein_id=WP_064153304.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1920559 1920705 . - . ID=gene-LI478_RS09305;Name=LI478_RS09305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS09305 NZ_CP085478.1 Protein Homology CDS 1920559 1920705 . - 0 ID=cds-WP_004225356.1;Parent=gene-LI478_RS09305;Dbxref=Genbank:WP_004225356.1;Name=WP_004225356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227597.1;locus_tag=LI478_RS09305;product=hypothetical protein;protein_id=WP_004225356.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1920995 1922053 . + . ID=gene-LI478_RS09310;Name=LI478_RS09310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS09310 NZ_CP085478.1 Protein Homology CDS 1920995 1922053 . + 0 ID=cds-WP_004189329.1;Parent=gene-LI478_RS09310;Dbxref=Genbank:WP_004189329.1;Name=WP_004189329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227596.1;locus_tag=LI478_RS09310;product=branched-chain amino acid ABC transporter substrate-binding protein;protein_id=WP_004189329.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1922163 1923077 . + . ID=gene-LI478_RS09315;Name=LI478_RS09315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS09315 NZ_CP085478.1 Protein Homology CDS 1922163 1923077 . + 0 ID=cds-WP_004175489.1;Parent=gene-LI478_RS09315;Dbxref=Genbank:WP_004175489.1;Name=WP_004175489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227595.1;locus_tag=LI478_RS09315;product=branched-chain amino acid ABC transporter permease;protein_id=WP_004175489.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1923087 1924373 . + . ID=gene-LI478_RS09320;Name=livM;gbkey=Gene;gene=livM;gene_biotype=protein_coding;locus_tag=LI478_RS09320 NZ_CP085478.1 Protein Homology CDS 1923087 1924373 . + 0 ID=cds-WP_021440350.1;Parent=gene-LI478_RS09320;Dbxref=Genbank:WP_021440350.1;Name=WP_021440350.1;Ontology_term=GO:0055085,GO:0015658,GO:0016020;gbkey=CDS;gene=livM;go_component=membrane|0016020||IEA;go_function=branched-chain amino acid transmembrane transporter activity|0015658||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910725.1;locus_tag=LI478_RS09320;product=high-affinity branched-chain amino acid ABC transporter permease LivM;protein_id=WP_021440350.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1924370 1925245 . + . ID=gene-LI478_RS09325;Name=LI478_RS09325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS09325 NZ_CP085478.1 Protein Homology CDS 1924370 1925245 . + 0 ID=cds-WP_004148803.1;Parent=gene-LI478_RS09325;Dbxref=Genbank:WP_004148803.1;Name=WP_004148803.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227592.1;locus_tag=LI478_RS09325;product=ATP-binding cassette domain-containing protein;protein_id=WP_004148803.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1925242 1925961 . + . ID=gene-LI478_RS09330;Name=LI478_RS09330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS09330 NZ_CP085478.1 Protein Homology CDS 1925242 1925961 . + 0 ID=cds-WP_004175491.1;Parent=gene-LI478_RS09330;Dbxref=Genbank:WP_004175491.1;Name=WP_004175491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227591.1;locus_tag=LI478_RS09330;product=ABC transporter ATP-binding protein;protein_id=WP_004175491.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1925967 1926860 . - . ID=gene-LI478_RS09335;Name=LI478_RS09335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS09335 NZ_CP085478.1 Protein Homology CDS 1925967 1926860 . - 0 ID=cds-WP_002910720.1;Parent=gene-LI478_RS09335;Dbxref=Genbank:WP_002910720.1;Name=WP_002910720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227590.1;locus_tag=LI478_RS09335;product=LysR substrate-binding domain-containing protein;protein_id=WP_002910720.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1927144 1928787 . + . ID=gene-LI478_RS09340;Name=pckA;gbkey=Gene;gene=pckA;gene_biotype=protein_coding;locus_tag=LI478_RS09340 NZ_CP085478.1 Protein Homology CDS 1927144 1928787 . + 0 ID=cds-WP_004148802.1;Parent=gene-LI478_RS09340;Dbxref=Genbank:WP_004148802.1;Name=WP_004148802.1;Ontology_term=GO:0006094,GO:0004612;gbkey=CDS;gene=pckA;go_function=phosphoenolpyruvate carboxykinase (ATP) activity|0004612||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227589.1;locus_tag=LI478_RS09340;product=phosphoenolpyruvate carboxykinase (ATP);protein_id=WP_004148802.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1928837 1929313 . - . ID=gene-LI478_RS09345;Name=LI478_RS09345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS09345 NZ_CP085478.1 Protein Homology CDS 1928837 1929313 . - 0 ID=cds-WP_004189338.1;Parent=gene-LI478_RS09345;Dbxref=Genbank:WP_004189338.1;Name=WP_004189338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227588.1;locus_tag=LI478_RS09345;product=GNAT family N-acetyltransferase;protein_id=WP_004189338.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1929412 1930338 . + . ID=gene-LI478_RS09350;Name=LI478_RS09350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS09350 NZ_CP085478.1 Protein Homology CDS 1929412 1930338 . + 0 ID=cds-WP_002910715.1;Parent=gene-LI478_RS09350;Dbxref=Genbank:WP_002910715.1;Name=WP_002910715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227587.1;locus_tag=LI478_RS09350;product=LysR family transcriptional regulator;protein_id=WP_002910715.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1930642 1931937 . + . ID=gene-LI478_RS09355;Name=LI478_RS09355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS09355 NZ_CP085478.1 Protein Homology CDS 1930642 1931937 . + 0 ID=cds-WP_004152313.1;Parent=gene-LI478_RS09355;Dbxref=Genbank:WP_004152313.1;Name=WP_004152313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004935508.1;locus_tag=LI478_RS09355;product=MFS transporter;protein_id=WP_004152313.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1931949 1932758 . + . ID=gene-LI478_RS09360;Name=LI478_RS09360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS09360 NZ_CP085478.1 Protein Homology CDS 1931949 1932758 . + 0 ID=cds-WP_004899032.1;Parent=gene-LI478_RS09360;Dbxref=Genbank:WP_004899032.1;Name=WP_004899032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227584.1;locus_tag=LI478_RS09360;product=substrate-binding domain-containing protein;protein_id=WP_004899032.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1932733 1933632 . - . ID=gene-LI478_RS09365;Name=LI478_RS09365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS09365 NZ_CP085478.1 Protein Homology CDS 1932733 1933632 . - 0 ID=cds-WP_004152315.1;Parent=gene-LI478_RS09365;Dbxref=Genbank:WP_004152315.1;Name=WP_004152315.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227583.1;locus_tag=LI478_RS09365;product=LysR family transcriptional regulator;protein_id=WP_004152315.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1933742 1934224 . - . ID=gene-LI478_RS09370;Name=LI478_RS09370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS09370 NZ_CP085478.1 Protein Homology CDS 1933742 1934224 . - 0 ID=cds-WP_002910657.1;Parent=gene-LI478_RS09370;Dbxref=Genbank:WP_002910657.1;Name=WP_002910657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227582.1;locus_tag=LI478_RS09370;product=cold shock domain-containing protein;protein_id=WP_002910657.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1934415 1935113 . + . ID=gene-LI478_RS09375;Name=LI478_RS09375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS09375 NZ_CP085478.1 Protein Homology CDS 1934415 1935113 . + 0 ID=cds-WP_016530143.1;Parent=gene-LI478_RS09375;Dbxref=Genbank:WP_016530143.1;Name=WP_016530143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004899029.1;locus_tag=LI478_RS09375;product=RluA family pseudouridine synthase;protein_id=WP_016530143.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1935139 1935678 . - . ID=gene-LI478_RS09380;Name=LI478_RS09380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS09380 NZ_CP085478.1 Protein Homology CDS 1935139 1935678 . - 0 ID=cds-WP_002910652.1;Parent=gene-LI478_RS09380;Dbxref=Genbank:WP_002910652.1;Name=WP_002910652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227580.1;locus_tag=LI478_RS09380;product=DUF2058 domain-containing protein;protein_id=WP_002910652.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1935793 1936122 . - . ID=gene-LI478_RS09385;Name=LI478_RS09385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS09385 NZ_CP085478.1 Protein Homology CDS 1935793 1936122 . - 0 ID=cds-WP_040089289.1;Parent=gene-LI478_RS09385;Dbxref=Genbank:WP_040089289.1;Name=WP_040089289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227579.1;locus_tag=LI478_RS09385;product=gamma-glutamylcyclotransferase;protein_id=WP_040089289.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1936691 1938031 . + . ID=gene-LI478_RS09390;Name=tssK;gbkey=Gene;gene=tssK;gene_biotype=protein_coding;locus_tag=LI478_RS09390 NZ_CP085478.1 Protein Homology CDS 1936691 1938031 . + 0 ID=cds-WP_032415142.1;Parent=gene-LI478_RS09390;Dbxref=Genbank:WP_032415142.1;Name=WP_032415142.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssK;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227577.1;locus_tag=LI478_RS09390;product=type VI secretion system baseplate subunit TssK;protein_id=WP_032415142.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1938028 1938681 . + . ID=gene-LI478_RS09395;Name=tssL;gbkey=Gene;gene=tssL;gene_biotype=protein_coding;locus_tag=LI478_RS09395 NZ_CP085478.1 Protein Homology CDS 1938028 1938681 . + 0 ID=cds-WP_032415141.1;Parent=gene-LI478_RS09395;Dbxref=Genbank:WP_032415141.1;Name=WP_032415141.1;gbkey=CDS;gene=tssL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227576.1;locus_tag=LI478_RS09395;product=type VI secretion system protein TssL%2C short form;protein_id=WP_032415141.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1938685 1940382 . + . ID=gene-LI478_RS09400;Name=LI478_RS09400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS09400 NZ_CP085478.1 Protein Homology CDS 1938685 1940382 . + 0 ID=cds-WP_064153302.1;Parent=gene-LI478_RS09400;Dbxref=Genbank:WP_064153302.1;Name=WP_064153302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227575.1;locus_tag=LI478_RS09400;product=OmpA family protein;protein_id=WP_064153302.1;transl_table=11 NZ_CP085478.1 RefSeq pseudogene 1940569 1940693 . + . ID=gene-LI478_RS09405;Name=LI478_RS09405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS09405;pseudo=true NZ_CP085478.1 Protein Homology CDS 1940569 1940693 . + 0 ID=cds-LI478_RS09405;Parent=gene-LI478_RS09405;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227574.1;locus_tag=LI478_RS09405;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP085478.1 RefSeq gene 1940844 1943543 . + . ID=gene-LI478_RS09410;Name=vgrG;gbkey=Gene;gene=vgrG;gene_biotype=protein_coding;locus_tag=LI478_RS09410 NZ_CP085478.1 Protein Homology CDS 1940844 1943543 . + 0 ID=cds-WP_064153300.1;Parent=gene-LI478_RS09410;Dbxref=Genbank:WP_064153300.1;Name=WP_064153300.1;gbkey=CDS;gene=vgrG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017879836.1;locus_tag=LI478_RS09410;product=type VI secretion system Vgr family protein;protein_id=WP_064153300.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1943594 1945417 . + . ID=gene-LI478_RS09415;Name=LI478_RS09415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS09415 NZ_CP085478.1 Protein Homology CDS 1943594 1945417 . + 0 ID=cds-WP_227394183.1;Parent=gene-LI478_RS09415;Dbxref=Genbank:WP_227394183.1;Name=WP_227394183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002463314.1;locus_tag=LI478_RS09415;product=phospholipase;protein_id=WP_227394183.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1945495 1946691 . + . ID=gene-LI478_RS09420;Name=LI478_RS09420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS09420 NZ_CP085478.1 Protein Homology CDS 1945495 1946691 . + 0 ID=cds-WP_223411784.1;Parent=gene-LI478_RS09420;Dbxref=Genbank:WP_223411784.1;Name=WP_223411784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002463313.1;locus_tag=LI478_RS09420;product=DUF6396 domain-containing protein;protein_id=WP_223411784.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1946729 1948009 . + . ID=gene-LI478_RS09425;Name=LI478_RS09425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS09425 NZ_CP085478.1 Protein Homology CDS 1946729 1948009 . + 0 ID=cds-WP_032415135.1;Parent=gene-LI478_RS09425;Dbxref=Genbank:WP_032415135.1;Name=WP_032415135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002463311.1;locus_tag=LI478_RS09425;product=DUF6396 domain-containing protein;protein_id=WP_032415135.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1948047 1949114 . + . ID=gene-LI478_RS09430;Name=LI478_RS09430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS09430 NZ_CP085478.1 Protein Homology CDS 1948047 1949114 . + 0 ID=cds-WP_021314035.1;Parent=gene-LI478_RS09430;Dbxref=Genbank:WP_021314035.1;Name=WP_021314035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017879838.1;locus_tag=LI478_RS09430;product=DUF6396 domain-containing protein;protein_id=WP_021314035.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1949284 1951155 . + . ID=gene-LI478_RS09435;Name=LI478_RS09435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS09435 NZ_CP085478.1 Protein Homology CDS 1949284 1951155 . + 0 ID=cds-WP_048332882.1;Parent=gene-LI478_RS09435;Dbxref=Genbank:WP_048332882.1;Name=WP_048332882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017879839.1;locus_tag=LI478_RS09435;product=phospholipase;protein_id=WP_048332882.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1951230 1952426 . + . ID=gene-LI478_RS09440;Name=LI478_RS09440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS09440 NZ_CP085478.1 Protein Homology CDS 1951230 1952426 . + 0 ID=cds-WP_021314033.1;Parent=gene-LI478_RS09440;Dbxref=Genbank:WP_021314033.1;Name=WP_021314033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017879837.1;locus_tag=LI478_RS09440;product=DUF6396 domain-containing protein;protein_id=WP_021314033.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1952464 1953528 . + . ID=gene-LI478_RS09445;Name=LI478_RS09445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS09445 NZ_CP085478.1 Protein Homology CDS 1952464 1953528 . + 0 ID=cds-WP_032415133.1;Parent=gene-LI478_RS09445;Dbxref=Genbank:WP_032415133.1;Name=WP_032415133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004216429.1;locus_tag=LI478_RS09445;product=DUF6396 domain-containing protein;protein_id=WP_032415133.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1953743 1954720 . + . ID=gene-LI478_RS09450;Name=LI478_RS09450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS09450 NZ_CP085478.1 Protein Homology CDS 1953743 1954720 . + 0 ID=cds-WP_021314031.1;Parent=gene-LI478_RS09450;Dbxref=Genbank:WP_021314031.1;Name=WP_021314031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016532069.1;locus_tag=LI478_RS09450;product=hypothetical protein;protein_id=WP_021314031.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1954808 1955071 . + . ID=gene-LI478_RS09455;Name=LI478_RS09455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS09455 NZ_CP085478.1 Protein Homology CDS 1954808 1955071 . + 0 ID=cds-WP_004216433.1;Parent=gene-LI478_RS09455;Dbxref=Genbank:WP_004216433.1;Name=WP_004216433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004216433.1;locus_tag=LI478_RS09455;product=PAAR domain-containing protein;protein_id=WP_004216433.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1955191 1956336 . + . ID=gene-LI478_RS09460;Name=LI478_RS09460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS09460 NZ_CP085478.1 Protein Homology CDS 1955191 1956336 . + 0 ID=cds-WP_021314030.1;Parent=gene-LI478_RS09460;Dbxref=Genbank:WP_021314030.1;Name=WP_021314030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016532067.1;locus_tag=LI478_RS09460;product=hypothetical protein;protein_id=WP_021314030.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1956442 1959837 . + . ID=gene-LI478_RS09465;Name=LI478_RS09465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS09465 NZ_CP085478.1 Protein Homology CDS 1956442 1959837 . + 0 ID=cds-WP_064153508.1;Parent=gene-LI478_RS09465;Dbxref=Genbank:WP_064153508.1;Name=WP_064153508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017879840.1;locus_tag=LI478_RS09465;product=type VI secretion protein VasK;protein_id=WP_064153508.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1959971 1961734 . + . ID=gene-LI478_RS09470;Name=tssF;gbkey=Gene;gene=tssF;gene_biotype=protein_coding;locus_tag=LI478_RS09470 NZ_CP085478.1 Protein Homology CDS 1959971 1961734 . + 0 ID=cds-WP_021314028.1;Parent=gene-LI478_RS09470;Dbxref=Genbank:WP_021314028.1;Name=WP_021314028.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssF;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227549.1;locus_tag=LI478_RS09470;product=type VI secretion system baseplate subunit TssF;protein_id=WP_021314028.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1961764 1962780 . + . ID=gene-LI478_RS09475;Name=tssG;gbkey=Gene;gene=tssG;gene_biotype=protein_coding;locus_tag=LI478_RS09475 NZ_CP085478.1 Protein Homology CDS 1961764 1962780 . + 0 ID=cds-WP_074184326.1;Parent=gene-LI478_RS09475;Dbxref=Genbank:WP_074184326.1;Name=WP_074184326.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssG;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227548.1;locus_tag=LI478_RS09475;product=type VI secretion system baseplate subunit TssG;protein_id=WP_074184326.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1962761 1963297 . + . ID=gene-LI478_RS09480;Name=tssJ;gbkey=Gene;gene=tssJ;gene_biotype=protein_coding;locus_tag=LI478_RS09480 NZ_CP085478.1 Protein Homology CDS 1962761 1963297 . + 0 ID=cds-WP_020806091.1;Parent=gene-LI478_RS09480;Dbxref=Genbank:WP_020806091.1;Name=WP_020806091.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssJ;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020806091.1;locus_tag=LI478_RS09480;product=type VI secretion system lipoprotein TssJ;protein_id=WP_020806091.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1963300 1963743 . + . ID=gene-LI478_RS09485;Name=tssE;gbkey=Gene;gene=tssE;gene_biotype=protein_coding;locus_tag=LI478_RS09485 NZ_CP085478.1 Protein Homology CDS 1963300 1963743 . + 0 ID=cds-WP_004152261.1;Parent=gene-LI478_RS09485;Dbxref=Genbank:WP_004152261.1;Name=WP_004152261.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssE;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227546.1;locus_tag=LI478_RS09485;product=type VI secretion system baseplate subunit TssE;protein_id=WP_004152261.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1963763 1965178 . + . ID=gene-LI478_RS09490;Name=LI478_RS09490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS09490 NZ_CP085478.1 Protein Homology CDS 1963763 1965178 . + 0 ID=cds-WP_021314025.1;Parent=gene-LI478_RS09490;Dbxref=Genbank:WP_021314025.1;Name=WP_021314025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227545.1;locus_tag=LI478_RS09490;product=type VI secretion system ImpA family N-terminal domain-containing protein;protein_id=WP_021314025.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1965310 1966224 . + . ID=gene-LI478_RS09495;Name=LI478_RS09495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS09495 NZ_CP085478.1 Protein Homology CDS 1965310 1966224 . + 0 ID=cds-WP_032415129.1;Parent=gene-LI478_RS09495;Dbxref=Genbank:WP_032415129.1;Name=WP_032415129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227544.1;locus_tag=LI478_RS09495;product=sugar ABC transporter substrate-binding protein;protein_id=WP_032415129.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1966309 1966638 . + . ID=gene-LI478_RS09500;Name=LI478_RS09500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS09500 NZ_CP085478.1 Protein Homology CDS 1966309 1966638 . + 0 ID=cds-WP_016530916.1;Parent=gene-LI478_RS09500;Dbxref=Genbank:WP_016530916.1;Name=WP_016530916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227543.1;locus_tag=LI478_RS09500;product=DUF1869 domain-containing protein;protein_id=WP_016530916.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1966721 1967812 . - . ID=gene-LI478_RS09505;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=LI478_RS09505 NZ_CP085478.1 Protein Homology CDS 1966721 1967812 . - 0 ID=cds-WP_002910443.1;Parent=gene-LI478_RS09505;Dbxref=Genbank:WP_002910443.1;Name=WP_002910443.1;Ontology_term=GO:0005525;gbkey=CDS;gene=ychF;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001538644.1;locus_tag=LI478_RS09505;product=redox-regulated ATPase YchF;protein_id=WP_002910443.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1967930 1968514 . - . ID=gene-LI478_RS09510;Name=pth;gbkey=Gene;gene=pth;gene_biotype=protein_coding;locus_tag=LI478_RS09510 NZ_CP085478.1 Protein Homology CDS 1967930 1968514 . - 0 ID=cds-WP_040225724.1;Parent=gene-LI478_RS09510;Dbxref=Genbank:WP_040225724.1;Name=WP_040225724.1;Ontology_term=GO:0006412,GO:0004045;gbkey=CDS;gene=pth;go_function=aminoacyl-tRNA hydrolase activity|0004045||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910438.1;locus_tag=LI478_RS09510;product=aminoacyl-tRNA hydrolase;protein_id=WP_040225724.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1968787 1969062 . + . ID=gene-LI478_RS09515;Name=ychH;gbkey=Gene;gene=ychH;gene_biotype=protein_coding;locus_tag=LI478_RS09515 NZ_CP085478.1 Protein Homology CDS 1968787 1969062 . + 0 ID=cds-WP_002910437.1;Parent=gene-LI478_RS09515;Dbxref=Genbank:WP_002910437.1;Name=WP_002910437.1;gbkey=CDS;gene=ychH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227540.1;locus_tag=LI478_RS09515;product=stress-induced protein YchH;protein_id=WP_002910437.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1969285 1970331 . + . ID=gene-LI478_RS09520;Name=LI478_RS09520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS09520 NZ_CP085478.1 Protein Homology CDS 1969285 1970331 . + 0 ID=cds-WP_004175547.1;Parent=gene-LI478_RS09520;Dbxref=Genbank:WP_004175547.1;Name=WP_004175547.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227539.1;locus_tag=LI478_RS09520;product=MerR family transcriptional regulator;protein_id=WP_004175547.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1970332 1972011 . - . ID=gene-LI478_RS09525;Name=dauA;gbkey=Gene;gene=dauA;gene_biotype=protein_coding;locus_tag=LI478_RS09525 NZ_CP085478.1 Protein Homology CDS 1970332 1972011 . - 0 ID=cds-WP_064152596.1;Parent=gene-LI478_RS09525;Dbxref=Genbank:WP_064152596.1;Name=WP_064152596.1;gbkey=CDS;gene=dauA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227538.1;locus_tag=LI478_RS09525;product=C4-dicarboxylic acid transporter DauA;protein_id=WP_064152596.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1972136 1973083 . - . ID=gene-LI478_RS09530;Name=prs;gbkey=Gene;gene=prs;gene_biotype=protein_coding;locus_tag=LI478_RS09530 NZ_CP085478.1 Protein Homology CDS 1972136 1973083 . - 0 ID=cds-WP_002910407.1;Parent=gene-LI478_RS09530;Dbxref=Genbank:WP_002910407.1;Name=WP_002910407.1;gbkey=CDS;gene=prs;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910407.1;locus_tag=LI478_RS09530;product=ribose-phosphate diphosphokinase;protein_id=WP_002910407.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1973267 1974115 . - . ID=gene-LI478_RS09535;Name=ispE;gbkey=Gene;gene=ispE;gene_biotype=protein_coding;locus_tag=LI478_RS09535 NZ_CP085478.1 Protein Homology CDS 1973267 1974115 . - 0 ID=cds-WP_004898981.1;Parent=gene-LI478_RS09535;Dbxref=Genbank:WP_004898981.1;Name=WP_004898981.1;Ontology_term=GO:0016114,GO:0050515;gbkey=CDS;gene=ispE;go_function=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity|0050515||IEA;go_process=terpenoid biosynthetic process|0016114||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227536.1;locus_tag=LI478_RS09535;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;protein_id=WP_004898981.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1974115 1974726 . - . ID=gene-LI478_RS09540;Name=lolB;gbkey=Gene;gene=lolB;gene_biotype=protein_coding;locus_tag=LI478_RS09540 NZ_CP085478.1 Protein Homology CDS 1974115 1974726 . - 0 ID=cds-WP_002910405.1;Parent=gene-LI478_RS09540;Dbxref=Genbank:WP_002910405.1;Name=WP_002910405.1;Ontology_term=GO:0009306,GO:0008320;gbkey=CDS;gene=lolB;go_function=protein transmembrane transporter activity|0008320||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227535.1;locus_tag=LI478_RS09540;product=lipoprotein insertase outer membrane protein LolB;protein_id=WP_002910405.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1974997 1976253 . + . ID=gene-LI478_RS09545;Name=hemA;gbkey=Gene;gene=hemA;gene_biotype=protein_coding;locus_tag=LI478_RS09545 NZ_CP085478.1 Protein Homology CDS 1974997 1976253 . + 0 ID=cds-WP_002910404.1;Parent=gene-LI478_RS09545;Dbxref=Genbank:WP_002910404.1;Name=WP_002910404.1;Ontology_term=GO:0006779,GO:0008883,GO:0005737;gbkey=CDS;gene=hemA;go_component=cytoplasm|0005737||IEA;go_function=glutamyl-tRNA reductase activity|0008883||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041689438.1;locus_tag=LI478_RS09545;product=glutamyl-tRNA reductase;protein_id=WP_002910404.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1976296 1977378 . + . ID=gene-LI478_RS09550;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=LI478_RS09550 NZ_CP085478.1 Protein Homology CDS 1976296 1977378 . + 0 ID=cds-WP_002910403.1;Parent=gene-LI478_RS09550;Dbxref=Genbank:WP_002910403.1;Name=WP_002910403.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfA;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012132158.1;locus_tag=LI478_RS09550;product=peptide chain release factor 1;protein_id=WP_002910403.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1977378 1978226 . + . ID=gene-LI478_RS09555;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=protein_coding;locus_tag=LI478_RS09555 NZ_CP085478.1 Protein Homology CDS 1977378 1978226 . + 0 ID=cds-WP_004215201.1;Parent=gene-LI478_RS09555;Dbxref=Genbank:WP_004215201.1;Name=WP_004215201.1;Ontology_term=GO:0006412,GO:0018364,GO:0008757;gbkey=CDS;gene=prmC;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=translation|0006412||IEA,peptidyl-glutamine methylation|0018364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227532.1;locus_tag=LI478_RS09555;product=peptide chain release factor N(5)-glutamine methyltransferase;protein_id=WP_004215201.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1978226 1978618 . + . ID=gene-LI478_RS09560;Name=sirB2;gbkey=Gene;gene=sirB2;gene_biotype=protein_coding;locus_tag=LI478_RS09560 NZ_CP085478.1 Protein Homology CDS 1978226 1978618 . + 0 ID=cds-WP_004145428.1;Parent=gene-LI478_RS09560;Dbxref=Genbank:WP_004145428.1;Name=WP_004145428.1;gbkey=CDS;gene=sirB2;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227531.1;locus_tag=LI478_RS09560;product=invasion regulator SirB2;protein_id=WP_004145428.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1978622 1979434 . + . ID=gene-LI478_RS09565;Name=sirB1;gbkey=Gene;gene=sirB1;gene_biotype=protein_coding;locus_tag=LI478_RS09565 NZ_CP085478.1 Protein Homology CDS 1978622 1979434 . + 0 ID=cds-WP_002910395.1;Parent=gene-LI478_RS09565;Dbxref=Genbank:WP_002910395.1;Name=WP_002910395.1;gbkey=CDS;gene=sirB1;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227530.1;locus_tag=LI478_RS09565;product=invasion regulator SirB1;protein_id=WP_002910395.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1979474 1980328 . + . ID=gene-LI478_RS09570;Name=kdsA;gbkey=Gene;gene=kdsA;gene_biotype=protein_coding;locus_tag=LI478_RS09570 NZ_CP085478.1 Protein Homology CDS 1979474 1980328 . + 0 ID=cds-WP_002910393.1;Parent=gene-LI478_RS09570;Dbxref=Genbank:WP_002910393.1;Name=WP_002910393.1;Ontology_term=GO:0008676;gbkey=CDS;gene=kdsA;go_function=3-deoxy-8-phosphooctulonate synthase activity|0008676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126202.1;locus_tag=LI478_RS09570;product=3-deoxy-8-phosphooctulonate synthase;protein_id=WP_002910393.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1980415 1981515 . - . ID=gene-LI478_RS09575;Name=chaA;gbkey=Gene;gene=chaA;gene_biotype=protein_coding;locus_tag=LI478_RS09575 NZ_CP085478.1 Protein Homology CDS 1980415 1981515 . - 0 ID=cds-WP_002910392.1;Parent=gene-LI478_RS09575;Dbxref=Genbank:WP_002910392.1;Name=WP_002910392.1;gbkey=CDS;gene=chaA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227528.1;locus_tag=LI478_RS09575;product=sodium-potassium/proton antiporter ChaA;protein_id=WP_002910392.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1981779 1982009 . + . ID=gene-LI478_RS09580;Name=chaB;gbkey=Gene;gene=chaB;gene_biotype=protein_coding;locus_tag=LI478_RS09580 NZ_CP085478.1 Protein Homology CDS 1981779 1982009 . + 0 ID=cds-WP_002910389.1;Parent=gene-LI478_RS09580;Dbxref=Genbank:WP_002910389.1;Name=WP_002910389.1;gbkey=CDS;gene=chaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460726.1;locus_tag=LI478_RS09580;product=putative cation transport regulator ChaB;protein_id=WP_002910389.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1982146 1982826 . + . ID=gene-LI478_RS09585;Name=LI478_RS09585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS09585 NZ_CP085478.1 Protein Homology CDS 1982146 1982826 . + 0 ID=cds-WP_023280258.1;Parent=gene-LI478_RS09585;Dbxref=Genbank:WP_023280258.1;Name=WP_023280258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227526.1;locus_tag=LI478_RS09585;product=gamma-glutamylcyclotransferase;protein_id=WP_023280258.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1983044 1983286 . - . ID=gene-LI478_RS09590;Name=LI478_RS09590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS09590 NZ_CP085478.1 Protein Homology CDS 1983044 1983286 . - 0 ID=cds-WP_002910387.1;Parent=gene-LI478_RS09590;Dbxref=Genbank:WP_002910387.1;Name=WP_002910387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227525.1;locus_tag=LI478_RS09590;product=DUF1883 domain-containing protein;protein_id=WP_002910387.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1983524 1983877 . - . ID=gene-LI478_RS09595;Name=LI478_RS09595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS09595 NZ_CP085478.1 Protein Homology CDS 1983524 1983877 . - 0 ID=cds-WP_002910380.1;Parent=gene-LI478_RS09595;Dbxref=Genbank:WP_002910380.1;Name=WP_002910380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227524.1;locus_tag=LI478_RS09595;product=DsrE/DsrF/TusD sulfur relay family protein;protein_id=WP_002910380.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1983945 1985126 . + . ID=gene-LI478_RS09600;Name=nasR;gbkey=Gene;gene=nasR;gene_biotype=protein_coding;locus_tag=LI478_RS09600 NZ_CP085478.1 Protein Homology CDS 1983945 1985126 . + 0 ID=cds-WP_032415128.1;Parent=gene-LI478_RS09600;Dbxref=Genbank:WP_032415128.1;Name=WP_032415128.1;Note=NasR is a transcription antiterminator and transcriptional regulator for the nasFEDCBA operon;Ontology_term=GO:0031564,GO:0003723;gbkey=CDS;gene=nasR;go_function=RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227523.1;locus_tag=LI478_RS09600;product=nitrate regulatory protein NasR;protein_id=WP_032415128.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1985369 1986625 . + . ID=gene-LI478_RS09605;Name=LI478_RS09605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS09605 NZ_CP085478.1 Protein Homology CDS 1985369 1986625 . + 0 ID=cds-WP_004175561.1;Parent=gene-LI478_RS09605;Dbxref=Genbank:WP_004175561.1;Name=WP_004175561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227521.1;locus_tag=LI478_RS09605;product=CmpA/NrtA family ABC transporter substrate-binding protein;protein_id=WP_004175561.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1986627 1987511 . + . ID=gene-LI478_RS09610;Name=ntrB;gbkey=Gene;gene=ntrB;gene_biotype=protein_coding;locus_tag=LI478_RS09610 NZ_CP085478.1 Protein Homology CDS 1986627 1987511 . + 0 ID=cds-WP_004152255.1;Parent=gene-LI478_RS09610;Dbxref=Genbank:WP_004152255.1;Name=WP_004152255.1;Ontology_term=GO:0015706,GO:0015414,GO:0005886,GO:0055052;gbkey=CDS;gene=ntrB;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type nitrate transporter activity|0015414||IEA;go_process=nitrate transmembrane transport|0015706||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017900761.1;locus_tag=LI478_RS09610;product=nitrate ABC transporter permease;protein_id=WP_004152255.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1987521 1988309 . + . ID=gene-LI478_RS09615;Name=LI478_RS09615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS09615 NZ_CP085478.1 Protein Homology CDS 1987521 1988309 . + 0 ID=cds-WP_004145418.1;Parent=gene-LI478_RS09615;Dbxref=Genbank:WP_004145418.1;Name=WP_004145418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227518.1;locus_tag=LI478_RS09615;product=ABC transporter ATP-binding protein;protein_id=WP_004145418.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1988320 1992387 . + . ID=gene-LI478_RS09620;Name=nirB;gbkey=Gene;gene=nirB;gene_biotype=protein_coding;locus_tag=LI478_RS09620 NZ_CP085478.1 Protein Homology CDS 1988320 1992387 . + 0 ID=cds-WP_077254435.1;Parent=gene-LI478_RS09620;Dbxref=Genbank:WP_077254435.1;Name=WP_077254435.1;Ontology_term=GO:0042128,GO:0008942,GO:0016491,GO:0050660,GO:0050661;gbkey=CDS;gene=nirB;go_function=nitrite reductase [NAD(P)H] activity|0008942||IEA,oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;go_process=nitrate assimilation|0042128||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008804397.1;locus_tag=LI478_RS09620;product=nitrite reductase large subunit NirB;protein_id=WP_077254435.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1992387 1994987 . + . ID=gene-LI478_RS09625;Name=LI478_RS09625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS09625 NZ_CP085478.1 Protein Homology CDS 1992387 1994987 . + 0 ID=cds-WP_032415127.1;Parent=gene-LI478_RS09625;Dbxref=Genbank:WP_032415127.1;Name=WP_032415127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227515.1;locus_tag=LI478_RS09625;product=nitrate reductase;protein_id=WP_032415127.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1995139 1996521 . + . ID=gene-LI478_RS09630;Name=LI478_RS09630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS09630 NZ_CP085478.1 Protein Homology CDS 1995139 1996521 . + 0 ID=cds-WP_002910201.1;Parent=gene-LI478_RS09630;Dbxref=Genbank:WP_002910201.1;Name=WP_002910201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017900763.1;locus_tag=LI478_RS09630;product=YchO/YchP family invasin;protein_id=WP_002910201.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1996518 1997168 . - . ID=gene-LI478_RS09635;Name=narL;gbkey=Gene;gene=narL;gene_biotype=protein_coding;locus_tag=LI478_RS09635 NZ_CP085478.1 Protein Homology CDS 1996518 1997168 . - 0 ID=cds-WP_032438267.1;Parent=gene-LI478_RS09635;Dbxref=Genbank:WP_032438267.1;Name=WP_032438267.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=narL;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227513.1;locus_tag=LI478_RS09635;product=two-component system response regulator NarL;protein_id=WP_032438267.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1997179 1998957 . - . ID=gene-LI478_RS09640;Name=narX;gbkey=Gene;gene=narX;gene_biotype=protein_coding;locus_tag=LI478_RS09640 NZ_CP085478.1 Protein Homology CDS 1997179 1998957 . - 0 ID=cds-WP_087791187.1;Parent=gene-LI478_RS09640;Dbxref=Genbank:WP_087791187.1;Name=WP_087791187.1;Ontology_term=GO:0000160,GO:0000155,GO:0046983,GO:0016020;gbkey=CDS;gene=narX;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein dimerization activity|0046983||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227512.1;locus_tag=LI478_RS09640;product=nitrate/nitrite two-component system sensor histidine kinase NarX;protein_id=WP_087791187.1;transl_table=11 NZ_CP085478.1 RefSeq gene 1999269 2000657 . + . ID=gene-LI478_RS09645;Name=LI478_RS09645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS09645 NZ_CP085478.1 Protein Homology CDS 1999269 2000657 . + 0 ID=cds-WP_004175568.1;Parent=gene-LI478_RS09645;Dbxref=Genbank:WP_004175568.1;Name=WP_004175568.1;Ontology_term=GO:0015707,GO:0015514,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=nitrite efflux transmembrane transporter activity|0015514||IEA;go_process=nitrite transport|0015707||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227511.1;locus_tag=LI478_RS09645;product=NarK family nitrate/nitrite MFS transporter;protein_id=WP_004175568.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2000783 2000884 . + . ID=gene-LI478_RS09650;Name=LI478_RS09650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS09650 NZ_CP085478.1 Protein Homology CDS 2000783 2000884 . + 0 ID=cds-WP_048333118.1;Parent=gene-LI478_RS09650;Dbxref=Genbank:WP_048333118.1;Name=WP_048333118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227510.1;locus_tag=LI478_RS09650;product=hypothetical protein;protein_id=WP_048333118.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2001063 2004806 . + . ID=gene-LI478_RS09655;Name=LI478_RS09655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS09655 NZ_CP085478.1 Protein Homology CDS 2001063 2004806 . + 0 ID=cds-WP_064153504.1;Parent=gene-LI478_RS09655;Dbxref=Genbank:WP_064153504.1;Name=WP_064153504.1;Ontology_term=GO:0009061,GO:0008940,GO:0009325;gbkey=CDS;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic respiration|0009061||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227509.1;locus_tag=LI478_RS09655;product=nitrate reductase subunit alpha;protein_id=WP_064153504.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2004803 2006338 . + . ID=gene-LI478_RS09660;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=LI478_RS09660 NZ_CP085478.1 Protein Homology CDS 2004803 2006338 . + 0 ID=cds-WP_002910193.1;Parent=gene-LI478_RS09660;Dbxref=Genbank:WP_002910193.1;Name=WP_002910193.1;Ontology_term=GO:0009061,GO:0008940,GO:0009325;gbkey=CDS;gene=narH;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic respiration|0009061||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227508.1;locus_tag=LI478_RS09660;product=nitrate reductase subunit beta;protein_id=WP_002910193.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2006335 2007045 . + . ID=gene-LI478_RS09665;Name=narJ;gbkey=Gene;gene=narJ;gene_biotype=protein_coding;locus_tag=LI478_RS09665 NZ_CP085478.1 Protein Homology CDS 2006335 2007045 . + 0 ID=cds-WP_002910191.1;Parent=gene-LI478_RS09665;Dbxref=Genbank:WP_002910191.1;Name=WP_002910191.1;Ontology_term=GO:0051131,GO:0051082;gbkey=CDS;gene=narJ;go_function=unfolded protein binding|0051082||IEA;go_process=chaperone-mediated protein complex assembly|0051131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227507.1;locus_tag=LI478_RS09665;product=nitrate reductase molybdenum cofactor assembly chaperone;protein_id=WP_002910191.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2007045 2007722 . + . ID=gene-LI478_RS09670;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=LI478_RS09670 NZ_CP085478.1 Protein Homology CDS 2007045 2007722 . + 0 ID=cds-WP_002910189.1;Parent=gene-LI478_RS09670;Dbxref=Genbank:WP_002910189.1;Name=WP_002910189.1;Ontology_term=GO:0019645,GO:0008940,GO:0009325;gbkey=CDS;gene=narI;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227506.1;locus_tag=LI478_RS09670;product=respiratory nitrate reductase subunit gamma;protein_id=WP_002910189.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2007719 2008615 . - . ID=gene-LI478_RS09675;Name=LI478_RS09675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS09675 NZ_CP085478.1 Protein Homology CDS 2007719 2008615 . - 0 ID=cds-WP_009307604.1;Parent=gene-LI478_RS09675;Dbxref=Genbank:WP_009307604.1;Name=WP_009307604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227505.1;locus_tag=LI478_RS09675;product=DMT family transporter;protein_id=WP_009307604.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2008723 2009166 . + . ID=gene-LI478_RS09680;Name=LI478_RS09680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS09680 NZ_CP085478.1 Protein Homology CDS 2008723 2009166 . + 0 ID=cds-WP_004152249.1;Parent=gene-LI478_RS09680;Dbxref=Genbank:WP_004152249.1;Name=WP_004152249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227504.1;locus_tag=LI478_RS09680;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_004152249.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2009281 2009422 . - . ID=gene-LI478_RS09685;Name=LI478_RS09685;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LI478_RS09685 NZ_CP085478.1 cmsearch ncRNA 2009281 2009422 . - . ID=rna-LI478_RS09685;Parent=gene-LI478_RS09685;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LI478_RS09685;product=RtT sRNA NZ_CP085478.1 cmsearch exon 2009281 2009422 . - . ID=exon-LI478_RS09685-1;Parent=rna-LI478_RS09685;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LI478_RS09685;product=RtT sRNA NZ_CP085478.1 RefSeq gene 2009466 2009597 . - . ID=gene-LI478_RS09690;Name=LI478_RS09690;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LI478_RS09690 NZ_CP085478.1 cmsearch ncRNA 2009466 2009597 . - . ID=rna-LI478_RS09690;Parent=gene-LI478_RS09690;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LI478_RS09690;product=RtT sRNA NZ_CP085478.1 cmsearch exon 2009466 2009597 . - . ID=exon-LI478_RS09690-1;Parent=rna-LI478_RS09690;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LI478_RS09690;product=RtT sRNA NZ_CP085478.1 RefSeq gene 2009642 2009773 . - . ID=gene-LI478_RS09695;Name=LI478_RS09695;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LI478_RS09695 NZ_CP085478.1 cmsearch ncRNA 2009642 2009773 . - . ID=rna-LI478_RS09695;Parent=gene-LI478_RS09695;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LI478_RS09695;product=RtT sRNA NZ_CP085478.1 cmsearch exon 2009642 2009773 . - . ID=exon-LI478_RS09695-1;Parent=rna-LI478_RS09695;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LI478_RS09695;product=RtT sRNA NZ_CP085478.1 RefSeq gene 2009818 2009949 . - . ID=gene-LI478_RS09700;Name=LI478_RS09700;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LI478_RS09700 NZ_CP085478.1 cmsearch ncRNA 2009818 2009949 . - . ID=rna-LI478_RS09700;Parent=gene-LI478_RS09700;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LI478_RS09700;product=RtT sRNA NZ_CP085478.1 cmsearch exon 2009818 2009949 . - . ID=exon-LI478_RS09700-1;Parent=rna-LI478_RS09700;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LI478_RS09700;product=RtT sRNA NZ_CP085478.1 RefSeq gene 2009994 2010125 . - . ID=gene-LI478_RS09705;Name=LI478_RS09705;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LI478_RS09705 NZ_CP085478.1 cmsearch ncRNA 2009994 2010125 . - . ID=rna-LI478_RS09705;Parent=gene-LI478_RS09705;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LI478_RS09705;product=RtT sRNA NZ_CP085478.1 cmsearch exon 2009994 2010125 . - . ID=exon-LI478_RS09705-1;Parent=rna-LI478_RS09705;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LI478_RS09705;product=RtT sRNA NZ_CP085478.1 RefSeq gene 2010170 2010254 . - . ID=gene-LI478_RS09710;Name=LI478_RS09710;gbkey=Gene;gene_biotype=tRNA;locus_tag=LI478_RS09710 NZ_CP085478.1 tRNAscan-SE tRNA 2010170 2010254 . - . ID=rna-LI478_RS09710;Parent=gene-LI478_RS09710;anticodon=(pos:complement(2010218..2010220));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS09710;product=tRNA-Tyr NZ_CP085478.1 tRNAscan-SE exon 2010170 2010254 . - . ID=exon-LI478_RS09710-1;Parent=rna-LI478_RS09710;anticodon=(pos:complement(2010218..2010220));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS09710;product=tRNA-Tyr NZ_CP085478.1 RefSeq gene 2010294 2010427 . - . ID=gene-LI478_RS09715;Name=LI478_RS09715;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LI478_RS09715 NZ_CP085478.1 cmsearch ncRNA 2010294 2010427 . - . ID=rna-LI478_RS09715;Parent=gene-LI478_RS09715;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LI478_RS09715;product=RtT sRNA NZ_CP085478.1 cmsearch exon 2010294 2010427 . - . ID=exon-LI478_RS09715-1;Parent=rna-LI478_RS09715;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LI478_RS09715;product=RtT sRNA NZ_CP085478.1 RefSeq gene 2010471 2010555 . - . ID=gene-LI478_RS09720;Name=LI478_RS09720;gbkey=Gene;gene_biotype=tRNA;locus_tag=LI478_RS09720 NZ_CP085478.1 tRNAscan-SE tRNA 2010471 2010555 . - . ID=rna-LI478_RS09720;Parent=gene-LI478_RS09720;anticodon=(pos:complement(2010519..2010521));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS09720;product=tRNA-Tyr NZ_CP085478.1 tRNAscan-SE exon 2010471 2010555 . - . ID=exon-LI478_RS09720-1;Parent=rna-LI478_RS09720;anticodon=(pos:complement(2010519..2010521));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS09720;product=tRNA-Tyr NZ_CP085478.1 RefSeq gene 2010715 2011557 . - . ID=gene-LI478_RS09725;Name=purU;gbkey=Gene;gene=purU;gene_biotype=protein_coding;locus_tag=LI478_RS09725 NZ_CP085478.1 Protein Homology CDS 2010715 2011557 . - 0 ID=cds-WP_004151854.1;Parent=gene-LI478_RS09725;Dbxref=Genbank:WP_004151854.1;Name=WP_004151854.1;Ontology_term=GO:0009152,GO:0008864;gbkey=CDS;gene=purU;go_function=formyltetrahydrofolate deformylase activity|0008864||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227503.1;locus_tag=LI478_RS09725;product=formyltetrahydrofolate deformylase;protein_id=WP_004151854.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2011600 2012058 . - . ID=gene-LI478_RS09730;Name=LI478_RS09730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS09730 NZ_CP085478.1 Protein Homology CDS 2011600 2012058 . - 0 ID=cds-WP_002910109.1;Parent=gene-LI478_RS09730;Dbxref=Genbank:WP_002910109.1;Name=WP_002910109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415749.1;locus_tag=LI478_RS09730;product=YchJ family protein;protein_id=WP_002910109.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2012171 2013073 . + . ID=gene-LI478_RS09735;Name=rssA;gbkey=Gene;gene=rssA;gene_biotype=protein_coding;locus_tag=LI478_RS09735 NZ_CP085478.1 Protein Homology CDS 2012171 2013073 . + 0 ID=cds-WP_002910108.1;Parent=gene-LI478_RS09735;Dbxref=Genbank:WP_002910108.1;Name=WP_002910108.1;Ontology_term=GO:0006629,GO:0004622;gbkey=CDS;gene=rssA;go_function=lysophospholipase activity|0004622||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227501.1;locus_tag=LI478_RS09735;product=patatin-like phospholipase RssA;protein_id=WP_002910108.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2013163 2014176 . + . ID=gene-LI478_RS09740;Name=rssB;gbkey=Gene;gene=rssB;gene_biotype=protein_coding;locus_tag=LI478_RS09740 NZ_CP085478.1 Protein Homology CDS 2013163 2014176 . + 0 ID=cds-WP_004175574.1;Parent=gene-LI478_RS09740;Dbxref=Genbank:WP_004175574.1;Name=WP_004175574.1;Ontology_term=GO:0000160;gbkey=CDS;gene=rssB;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227500.1;locus_tag=LI478_RS09740;product=two-component system response regulator RssB;protein_id=WP_004175574.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2014374 2015276 . + . ID=gene-LI478_RS09745;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=LI478_RS09745 NZ_CP085478.1 Protein Homology CDS 2014374 2015276 . + 0 ID=cds-WP_021313027.1;Parent=gene-LI478_RS09745;Dbxref=Genbank:WP_021313027.1;Name=WP_021313027.1;gbkey=CDS;gene=galU;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227499.1;locus_tag=LI478_RS09745;product=UTP--glucose-1-phosphate uridylyltransferase GalU;protein_id=WP_021313027.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2015397 2015804 . - . ID=gene-LI478_RS09750;Name=hns;gbkey=Gene;gene=hns;gene_biotype=protein_coding;locus_tag=LI478_RS09750 NZ_CP085478.1 Protein Homology CDS 2015397 2015804 . - 0 ID=cds-WP_002910103.1;Parent=gene-LI478_RS09750;Dbxref=Genbank:WP_002910103.1;Name=WP_002910103.1;gbkey=CDS;gene=hns;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227498.1;locus_tag=LI478_RS09750;product=DNA-binding transcriptional regulator H-NS;protein_id=WP_002910103.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2016227 2016358 . - . ID=gene-LI478_RS09755;Name=LI478_RS09755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS09755 NZ_CP085478.1 Protein Homology CDS 2016227 2016358 . - 0 ID=cds-WP_004145401.1;Parent=gene-LI478_RS09755;Dbxref=Genbank:WP_004145401.1;Name=WP_004145401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227497.1;locus_tag=LI478_RS09755;product=hypothetical protein;protein_id=WP_004145401.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2016366 2016983 . + . ID=gene-LI478_RS09760;Name=tdk;gbkey=Gene;gene=tdk;gene_biotype=protein_coding;locus_tag=LI478_RS09760 NZ_CP085478.1 Protein Homology CDS 2016366 2016983 . + 0 ID=cds-WP_002910100.1;Parent=gene-LI478_RS09760;Dbxref=Genbank:WP_002910100.1;Name=WP_002910100.1;gbkey=CDS;gene=tdk;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016529469.1;locus_tag=LI478_RS09760;product=thymidine kinase;protein_id=WP_002910100.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2017131 2019806 . - . ID=gene-LI478_RS09765;Name=adhE;gbkey=Gene;gene=adhE;gene_biotype=protein_coding;gene_synonym=adhC;locus_tag=LI478_RS09765 NZ_CP085478.1 Protein Homology CDS 2017131 2019806 . - 0 ID=cds-WP_016529470.1;Parent=gene-LI478_RS09765;Dbxref=Genbank:WP_016529470.1;Name=WP_016529470.1;Ontology_term=GO:0006066,GO:0015976,GO:0004022,GO:0016620,GO:0046872;gbkey=CDS;gene=adhE;go_function=alcohol dehydrogenase (NAD+) activity|0004022||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,metal ion binding|0046872||IEA;go_process=alcohol metabolic process|0006066||IEA,carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227495.1;locus_tag=LI478_RS09765;product=bifunctional acetaldehyde-CoA/alcohol dehydrogenase;protein_id=WP_016529470.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2019884 2020069 . + . ID=gene-LI478_RS09770;Name=LI478_RS09770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS09770 NZ_CP085478.1 Protein Homology CDS 2019884 2020069 . + 0 ID=cds-WP_032103886.1;Parent=gene-LI478_RS09770;Dbxref=Genbank:WP_032103886.1;Name=WP_032103886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227494.1;locus_tag=LI478_RS09770;product=hypothetical protein;protein_id=WP_032103886.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2020283 2020930 . + . ID=gene-LI478_RS09775;Name=LI478_RS09775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS09775 NZ_CP085478.1 Protein Homology CDS 2020283 2020930 . + 0 ID=cds-WP_002910095.1;Parent=gene-LI478_RS09775;Dbxref=Genbank:WP_002910095.1;Name=WP_002910095.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227493.1;locus_tag=LI478_RS09775;product=YchE family NAAT transporter;protein_id=WP_002910095.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2021668 2023302 . + . ID=gene-LI478_RS09780;Name=oppA;gbkey=Gene;gene=oppA;gene_biotype=protein_coding;locus_tag=LI478_RS09780 NZ_CP085478.1 Protein Homology CDS 2021668 2023302 . + 0 ID=cds-WP_004148754.1;Parent=gene-LI478_RS09780;Dbxref=Genbank:WP_004148754.1;Name=WP_004148754.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=oppA;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227491.1;locus_tag=LI478_RS09780;product=oligopeptide ABC transporter substrate-binding protein OppA;protein_id=WP_004148754.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2023388 2024308 . + . ID=gene-LI478_RS09785;Name=oppB;gbkey=Gene;gene=oppB;gene_biotype=protein_coding;locus_tag=LI478_RS09785 NZ_CP085478.1 Protein Homology CDS 2023388 2024308 . + 0 ID=cds-WP_002910089.1;Parent=gene-LI478_RS09785;Dbxref=Genbank:WP_002910089.1;Name=WP_002910089.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=oppB;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126405.1;locus_tag=LI478_RS09785;product=oligopeptide ABC transporter permease OppB;protein_id=WP_002910089.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2024323 2025231 . + . ID=gene-LI478_RS09790;Name=oppC;gbkey=Gene;gene=oppC;gene_biotype=protein_coding;locus_tag=LI478_RS09790 NZ_CP085478.1 Protein Homology CDS 2024323 2025231 . + 0 ID=cds-WP_004145396.1;Parent=gene-LI478_RS09790;Dbxref=Genbank:WP_004145396.1;Name=WP_004145396.1;Ontology_term=GO:0055085;gbkey=CDS;gene=oppC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000979653.1;locus_tag=LI478_RS09790;product=oligopeptide ABC transporter permease OppC;protein_id=WP_004145396.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2025243 2026256 . + . ID=gene-LI478_RS09795;Name=LI478_RS09795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS09795 NZ_CP085478.1 Protein Homology CDS 2025243 2026256 . + 0 ID=cds-WP_004151853.1;Parent=gene-LI478_RS09795;Dbxref=Genbank:WP_004151853.1;Name=WP_004151853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227488.1;locus_tag=LI478_RS09795;product=ABC transporter ATP-binding protein;protein_id=WP_004151853.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2026253 2027257 . + . ID=gene-LI478_RS09800;Name=oppF;gbkey=Gene;gene=oppF;gene_biotype=protein_coding;locus_tag=LI478_RS09800 NZ_CP085478.1 Protein Homology CDS 2026253 2027257 . + 0 ID=cds-WP_002910083.1;Parent=gene-LI478_RS09800;Dbxref=Genbank:WP_002910083.1;Name=WP_002910083.1;gbkey=CDS;gene=oppF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227487.1;locus_tag=LI478_RS09800;product=murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppF;protein_id=WP_002910083.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2027312 2028139 . + . ID=gene-LI478_RS09805;Name=LI478_RS09805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS09805 NZ_CP085478.1 Protein Homology CDS 2027312 2028139 . + 0 ID=cds-WP_002910080.1;Parent=gene-LI478_RS09805;Dbxref=Genbank:WP_002910080.1;Name=WP_002910080.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227486.1;locus_tag=LI478_RS09805;product=ion transporter;protein_id=WP_002910080.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2028202 2028531 . - . ID=gene-LI478_RS09810;Name=LI478_RS09810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS09810 NZ_CP085478.1 Protein Homology CDS 2028202 2028531 . - 0 ID=cds-WP_002910079.1;Parent=gene-LI478_RS09810;Dbxref=Genbank:WP_002910079.1;Name=WP_002910079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227485.1;locus_tag=LI478_RS09810;product=HI1450 family dsDNA-mimic protein;protein_id=WP_002910079.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2028566 2030026 . - . ID=gene-LI478_RS09815;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=LI478_RS09815 NZ_CP085478.1 Protein Homology CDS 2028566 2030026 . - 0 ID=cds-WP_002910077.1;Parent=gene-LI478_RS09815;Dbxref=Genbank:WP_002910077.1;Name=WP_002910077.1;Ontology_term=GO:0032049,GO:0008808;gbkey=CDS;gene=cls;go_function=cardiolipin synthase activity|0008808||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126413.1;locus_tag=LI478_RS09815;product=cardiolipin synthase;protein_id=WP_002910077.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2030170 2030343 . + . ID=gene-LI478_RS09820;Name=LI478_RS09820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS09820 NZ_CP085478.1 Protein Homology CDS 2030170 2030343 . + 0 ID=cds-WP_004194006.1;Parent=gene-LI478_RS09820;Dbxref=Genbank:WP_004194006.1;Name=WP_004194006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194006.1;locus_tag=LI478_RS09820;product=YciY family protein;protein_id=WP_004194006.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2030846 2031493 . - . ID=gene-LI478_RS09825;Name=LI478_RS09825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS09825 NZ_CP085478.1 Protein Homology CDS 2030846 2031493 . - 0 ID=cds-WP_072196945.1;Parent=gene-LI478_RS09825;Dbxref=Genbank:WP_072196945.1;Name=WP_072196945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227481.1;locus_tag=LI478_RS09825;product=YceI family protein;protein_id=WP_072196945.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2031921 2032061 . - . ID=gene-LI478_RS09830;Name=LI478_RS09830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS09830 NZ_CP085478.1 Protein Homology CDS 2031921 2032061 . - 0 ID=cds-WP_032103891.1;Parent=gene-LI478_RS09830;Dbxref=Genbank:WP_032103891.1;Name=WP_032103891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227480.1;locus_tag=LI478_RS09830;product=hypothetical protein;protein_id=WP_032103891.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2032174 2032470 . - . ID=gene-LI478_RS09835;Name=LI478_RS09835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS09835 NZ_CP085478.1 Protein Homology CDS 2032174 2032470 . - 0 ID=cds-WP_002910042.1;Parent=gene-LI478_RS09835;Dbxref=Genbank:WP_002910042.1;Name=WP_002910042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227479.1;locus_tag=LI478_RS09835;product=YciI family protein;protein_id=WP_002910042.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2032681 2033427 . + . ID=gene-LI478_RS09840;Name=tonB;gbkey=Gene;gene=tonB;gene_biotype=protein_coding;locus_tag=LI478_RS09840 NZ_CP085478.1 Protein Homology CDS 2032681 2033427 . + 0 ID=cds-WP_004145385.1;Parent=gene-LI478_RS09840;Dbxref=Genbank:WP_004145385.1;Name=WP_004145385.1;Ontology_term=GO:0015891,GO:0055085,GO:0015343,GO:0030288;gbkey=CDS;gene=tonB;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=siderophore-iron transmembrane transporter activity|0015343||IEA;go_process=siderophore transport|0015891||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020317059.1;locus_tag=LI478_RS09840;product=TonB system transport protein TonB;protein_id=WP_004145385.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2033471 2034343 . - . ID=gene-LI478_RS09845;Name=LI478_RS09845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS09845 NZ_CP085478.1 Protein Homology CDS 2033471 2034343 . - 0 ID=cds-WP_002910036.1;Parent=gene-LI478_RS09845;Dbxref=Genbank:WP_002910036.1;Name=WP_002910036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227477.1;locus_tag=LI478_RS09845;product=fructosamine kinase family protein;protein_id=WP_002910036.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2034449 2034733 . - . ID=gene-LI478_RS09850;Name=ghoS;gbkey=Gene;gene=ghoS;gene_biotype=protein_coding;locus_tag=LI478_RS09850 NZ_CP085478.1 Protein Homology CDS 2034449 2034733 . - 0 ID=cds-WP_002910033.1;Parent=gene-LI478_RS09850;Dbxref=Genbank:WP_002910033.1;Name=WP_002910033.1;Ontology_term=GO:0004521;gbkey=CDS;gene=ghoS;go_function=endoribonuclease activity|0004521||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227476.1;locus_tag=LI478_RS09850;product=type V toxin-antitoxin system endoribonuclease antitoxin GhoS;protein_id=WP_002910033.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2034828 2035760 . - . ID=gene-LI478_RS09855;Name=pfkB;gbkey=Gene;gene=pfkB;gene_biotype=protein_coding;locus_tag=LI478_RS09855 NZ_CP085478.1 Protein Homology CDS 2034828 2035760 . - 0 ID=cds-WP_004145382.1;Parent=gene-LI478_RS09855;Dbxref=Genbank:WP_004145382.1;Name=WP_004145382.1;Ontology_term=GO:0005975,GO:0016773;gbkey=CDS;gene=pfkB;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227475.1;locus_tag=LI478_RS09855;product=6-phosphofructokinase II;protein_id=WP_004145382.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2036117 2036875 . + . ID=gene-LI478_RS09860;Name=LI478_RS09860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS09860 NZ_CP085478.1 Protein Homology CDS 2036117 2036875 . + 0 ID=cds-WP_002910030.1;Parent=gene-LI478_RS09860;Dbxref=Genbank:WP_002910030.1;Name=WP_002910030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310455.1;locus_tag=LI478_RS09860;product=YdiY family protein;protein_id=WP_002910030.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2037147 2037380 . + . ID=gene-LI478_RS09865;Name=LI478_RS09865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS09865 NZ_CP085478.1 Protein Homology CDS 2037147 2037380 . + 0 ID=cds-WP_002910028.1;Parent=gene-LI478_RS09865;Dbxref=Genbank:WP_002910028.1;Name=WP_002910028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227473.1;locus_tag=LI478_RS09865;product=hypothetical protein;protein_id=WP_002910028.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2037813 2039741 . + . ID=gene-LI478_RS09870;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=LI478_RS09870 NZ_CP085478.1 Protein Homology CDS 2037813 2039741 . + 0 ID=cds-WP_002910026.1;Parent=gene-LI478_RS09870;Dbxref=Genbank:WP_002910026.1;Name=WP_002910026.1;Ontology_term=GO:0006435,GO:0004829,GO:0005737;gbkey=CDS;gene=thrS;go_component=cytoplasm|0005737||IEA;go_function=threonine-tRNA ligase activity|0004829||IEA;go_process=threonyl-tRNA aminoacylation|0006435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006894721.1;locus_tag=LI478_RS09870;product=threonine--tRNA ligase;protein_id=WP_002910026.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2039745 2040287 . + . ID=gene-LI478_RS09875;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=LI478_RS09875 NZ_CP085478.1 Protein Homology CDS 2039745 2040287 . + 0 ID=cds-WP_004189469.1;Parent=gene-LI478_RS09875;Dbxref=Genbank:WP_004189469.1;Name=WP_004189469.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infC;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310452.1;locus_tag=LI478_RS09875;product=translation initiation factor IF-3;protein_id=WP_004189469.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2040380 2040577 . + . ID=gene-LI478_RS09880;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=LI478_RS09880 NZ_CP085478.1 Protein Homology CDS 2040380 2040577 . + 0 ID=cds-WP_001124225.1;Parent=gene-LI478_RS09880;Dbxref=Genbank:WP_001124225.1;Name=WP_001124225.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmI;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006708231.1;locus_tag=LI478_RS09880;product=50S ribosomal protein L35;protein_id=WP_001124225.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2040628 2040984 . + . ID=gene-LI478_RS09885;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=LI478_RS09885 NZ_CP085478.1 Protein Homology CDS 2040628 2040984 . + 0 ID=cds-WP_000124850.1;Parent=gene-LI478_RS09885;Dbxref=Genbank:WP_000124850.1;Name=WP_000124850.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0005840;gbkey=CDS;gene=rplT;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310450.1;locus_tag=LI478_RS09885;product=50S ribosomal protein L20;protein_id=WP_000124850.1;transl_table=11 NZ_CP085478.1 cmsearch sequence_feature 2041103 2041227 . + . ID=id-NZ_CP085478.1:2041103..2041227;Dbxref=RFAM:RF01859;Note=Phe leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1 NZ_CP085478.1 RefSeq gene 2041108 2041152 . + . ID=gene-LI478_RS09890;Name=pheM;gbkey=Gene;gene=pheM;gene_biotype=protein_coding;locus_tag=LI478_RS09890 NZ_CP085478.1 Protein Homology CDS 2041108 2041152 . + 0 ID=cds-WP_001386830.1;Parent=gene-LI478_RS09890;Dbxref=Genbank:WP_001386830.1;Name=WP_001386830.1;gbkey=CDS;gene=pheM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310449.1;locus_tag=LI478_RS09890;product=pheST operon leader peptide PheM;protein_id=WP_001386830.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2041291 2042274 . + . ID=gene-LI478_RS09895;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=LI478_RS09895 NZ_CP085478.1 Protein Homology CDS 2041291 2042274 . + 0 ID=cds-WP_020802654.1;Parent=gene-LI478_RS09895;Dbxref=Genbank:WP_020802654.1;Name=WP_020802654.1;Ontology_term=GO:0006432,GO:0004826,GO:0009328;gbkey=CDS;gene=pheS;go_component=phenylalanine-tRNA ligase complex|0009328||IEA;go_function=phenylalanine-tRNA ligase activity|0004826||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004851795.1;locus_tag=LI478_RS09895;product=phenylalanine--tRNA ligase subunit alpha;protein_id=WP_020802654.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2042290 2044677 . + . ID=gene-LI478_RS09900;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=LI478_RS09900 NZ_CP085478.1 Protein Homology CDS 2042290 2044677 . + 0 ID=cds-WP_064153503.1;Parent=gene-LI478_RS09900;Dbxref=Genbank:WP_064153503.1;Name=WP_064153503.1;Ontology_term=GO:0006432,GO:0004826,GO:0009328;gbkey=CDS;gene=pheT;go_component=phenylalanine-tRNA ligase complex|0009328||IEA;go_function=phenylalanine-tRNA ligase activity|0004826||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227468.1;locus_tag=LI478_RS09900;product=phenylalanine--tRNA ligase subunit beta;protein_id=WP_064153503.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2044682 2044981 . + . ID=gene-LI478_RS09905;Name=ihfA;gbkey=Gene;gene=ihfA;gene_biotype=protein_coding;locus_tag=LI478_RS09905 NZ_CP085478.1 Protein Homology CDS 2044682 2044981 . + 0 ID=cds-WP_002909098.1;Parent=gene-LI478_RS09905;Dbxref=Genbank:WP_002909098.1;Name=WP_002909098.1;Ontology_term=GO:0006310,GO:0006355,GO:0006417,GO:0075713,GO:0003677;gbkey=CDS;gene=ihfA;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA,regulation of translation|0006417||IEA,establishment of integrated proviral latency|0075713||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227467.1;locus_tag=LI478_RS09905;product=integration host factor subunit alpha;protein_id=WP_002909098.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2045034 2045387 . - . ID=gene-LI478_RS09910;Name=LI478_RS09910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS09910 NZ_CP085478.1 Protein Homology CDS 2045034 2045387 . - 0 ID=cds-WP_021440321.1;Parent=gene-LI478_RS09910;Dbxref=Genbank:WP_021440321.1;Name=WP_021440321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227466.1;locus_tag=LI478_RS09910;product=RidA family protein;protein_id=WP_021440321.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2045384 2046637 . - . ID=gene-LI478_RS09915;Name=LI478_RS09915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS09915 NZ_CP085478.1 Protein Homology CDS 2045384 2046637 . - 0 ID=cds-WP_064153501.1;Parent=gene-LI478_RS09915;Dbxref=Genbank:WP_064153501.1;Name=WP_064153501.1;Ontology_term=GO:0019478,GO:0008718;gbkey=CDS;go_function=D-amino-acid dehydrogenase activity|0008718||IEA;go_process=D-amino acid catabolic process|0019478||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227465.1;locus_tag=LI478_RS09915;product=D-amino acid dehydrogenase;protein_id=WP_064153501.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2046687 2047601 . - . ID=gene-LI478_RS09920;Name=LI478_RS09920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS09920 NZ_CP085478.1 Protein Homology CDS 2046687 2047601 . - 0 ID=cds-WP_002909089.1;Parent=gene-LI478_RS09920;Dbxref=Genbank:WP_002909089.1;Name=WP_002909089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227464.1;locus_tag=LI478_RS09920;product=LysR family transcriptional regulator;protein_id=WP_002909089.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2047882 2049315 . + . ID=gene-LI478_RS09925;Name=LI478_RS09925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS09925 NZ_CP085478.1 Protein Homology CDS 2047882 2049315 . + 0 ID=cds-WP_014907393.1;Parent=gene-LI478_RS09925;Dbxref=Genbank:WP_014907393.1;Name=WP_014907393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227463.1;locus_tag=LI478_RS09925;product=gluconate:proton symporter;protein_id=WP_014907393.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2049437 2050423 . + . ID=gene-LI478_RS09930;Name=btuC;gbkey=Gene;gene=btuC;gene_biotype=protein_coding;locus_tag=LI478_RS09930 NZ_CP085478.1 Protein Homology CDS 2049437 2050423 . + 0 ID=cds-WP_004151850.1;Parent=gene-LI478_RS09930;Dbxref=Genbank:WP_004151850.1;Name=WP_004151850.1;Ontology_term=GO:0005524,GO:0022857;gbkey=CDS;gene=btuC;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227462.1;locus_tag=LI478_RS09930;product=vitamin B12 ABC transporter permease BtuC;protein_id=WP_004151850.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2050460 2051260 . - . ID=gene-LI478_RS09935;Name=LI478_RS09935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS09935 NZ_CP085478.1 Protein Homology CDS 2050460 2051260 . - 0 ID=cds-WP_002909085.1;Parent=gene-LI478_RS09935;Dbxref=Genbank:WP_002909085.1;Name=WP_002909085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004102954.1;locus_tag=LI478_RS09935;product=MetQ/NlpA family lipoprotein;protein_id=WP_002909085.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2051497 2052048 . + . ID=gene-LI478_RS09940;Name=LI478_RS09940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS09940 NZ_CP085478.1 Protein Homology CDS 2051497 2052048 . + 0 ID=cds-WP_004898898.1;Parent=gene-LI478_RS09940;Dbxref=Genbank:WP_004898898.1;Name=WP_004898898.1;Ontology_term=GO:0006979,GO:0004602;gbkey=CDS;go_function=glutathione peroxidase activity|0004602||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227460.1;locus_tag=LI478_RS09940;product=glutathione peroxidase;protein_id=WP_004898898.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2052048 2052797 . + . ID=gene-LI478_RS09945;Name=btuD;gbkey=Gene;gene=btuD;gene_biotype=protein_coding;locus_tag=LI478_RS09945 NZ_CP085478.1 Protein Homology CDS 2052048 2052797 . + 0 ID=cds-WP_020803964.1;Parent=gene-LI478_RS09945;Dbxref=Genbank:WP_020803964.1;Name=WP_020803964.1;Ontology_term=GO:0015889,GO:0005524;gbkey=CDS;gene=btuD;go_function=ATP binding|0005524||IEA;go_process=cobalamin transport|0015889||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227459.1;locus_tag=LI478_RS09945;product=vitamin B12 ABC transporter ATP-binding protein BtuD;protein_id=WP_020803964.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2052877 2053341 . + . ID=gene-LI478_RS09950;Name=LI478_RS09950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS09950 NZ_CP085478.1 Protein Homology CDS 2052877 2053341 . + 0 ID=cds-WP_002909082.1;Parent=gene-LI478_RS09950;Dbxref=Genbank:WP_002909082.1;Name=WP_002909082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227458.1;locus_tag=LI478_RS09950;product=NlpC/P60 family protein;protein_id=WP_002909082.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2053455 2054897 . + . ID=gene-LI478_RS09955;Name=selO;gbkey=Gene;gene=selO;gene_biotype=protein_coding;locus_tag=LI478_RS09955 NZ_CP085478.1 Protein Homology CDS 2053455 2054897 . + 0 ID=cds-WP_004184566.1;Parent=gene-LI478_RS09955;Dbxref=Genbank:WP_004184566.1;Name=WP_004184566.1;Ontology_term=GO:0018117,GO:0005524,GO:0070733;gbkey=CDS;gene=selO;go_function=ATP binding|0005524||IEA,protein adenylyltransferase activity|0070733||IEA;go_process=protein adenylylation|0018117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227457.1;locus_tag=LI478_RS09955;product=protein adenylyltransferase SelO;protein_id=WP_004184566.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2054927 2055106 . - . ID=gene-LI478_RS09960;Name=hemP;gbkey=Gene;gene=hemP;gene_biotype=protein_coding;locus_tag=LI478_RS09960 NZ_CP085478.1 Protein Homology CDS 2054927 2055106 . - 0 ID=cds-WP_014343179.1;Parent=gene-LI478_RS09960;Dbxref=Genbank:WP_014343179.1;Name=WP_014343179.1;gbkey=CDS;gene=hemP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227456.1;locus_tag=LI478_RS09960;product=hemin uptake protein HemP;protein_id=WP_014343179.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2055262 2056308 . - . ID=gene-LI478_RS09965;Name=aroH;gbkey=Gene;gene=aroH;gene_biotype=protein_coding;locus_tag=LI478_RS09965 NZ_CP085478.1 Protein Homology CDS 2055262 2056308 . - 0 ID=cds-WP_004180369.1;Parent=gene-LI478_RS09965;Dbxref=Genbank:WP_004180369.1;Name=WP_004180369.1;gbkey=CDS;gene=aroH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004175613.1;locus_tag=LI478_RS09965;product=3-deoxy-7-phosphoheptulonate synthase AroH;protein_id=WP_004180369.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2056463 2057296 . - . ID=gene-LI478_RS09970;Name=LI478_RS09970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS09970 NZ_CP085478.1 Protein Homology CDS 2056463 2057296 . - 0 ID=cds-WP_002909061.1;Parent=gene-LI478_RS09970;Dbxref=Genbank:WP_002909061.1;Name=WP_002909061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227454.1;locus_tag=LI478_RS09970;product=kinase/pyrophosphorylase;protein_id=WP_002909061.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2057441 2057560 . - . ID=gene-LI478_RS09975;Name=LI478_RS09975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS09975 NZ_CP085478.1 Protein Homology CDS 2057441 2057560 . - 0 ID=cds-WP_002909058.1;Parent=gene-LI478_RS09975;Dbxref=Genbank:WP_002909058.1;Name=WP_002909058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227453.1;locus_tag=LI478_RS09975;product=hypothetical protein;protein_id=WP_002909058.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2057636 2060014 . + . ID=gene-LI478_RS09980;Name=ppsA;gbkey=Gene;gene=ppsA;gene_biotype=protein_coding;locus_tag=LI478_RS09980 NZ_CP085478.1 Protein Homology CDS 2057636 2060014 . + 0 ID=cds-WP_002909055.1;Parent=gene-LI478_RS09980;Dbxref=Genbank:WP_002909055.1;Name=WP_002909055.1;Ontology_term=GO:0006090,GO:0016310,GO:0005524,GO:0008986,GO:0016772;gbkey=CDS;gene=ppsA;go_function=ATP binding|0005524||IEA,pyruvate%2C water dikinase activity|0008986||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=pyruvate metabolic process|0006090||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227452.1;locus_tag=LI478_RS09980;product=phosphoenolpyruvate synthase;protein_id=WP_002909055.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2060101 2060208 . - . ID=gene-LI478_RS09985;Name=rprA;gbkey=Gene;gene=rprA;gene_biotype=antisense_RNA;locus_tag=LI478_RS09985 NZ_CP085478.1 cmsearch antisense_RNA 2060101 2060208 . - . ID=rna-LI478_RS09985;Parent=gene-LI478_RS09985;Dbxref=RFAM:RF00034;gbkey=ncRNA;gene=rprA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LI478_RS09985;product=antisense sRNA RprA NZ_CP085478.1 cmsearch exon 2060101 2060208 . - . ID=exon-LI478_RS09985-1;Parent=rna-LI478_RS09985;Dbxref=RFAM:RF00034;gbkey=ncRNA;gene=rprA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LI478_RS09985;product=antisense sRNA RprA NZ_CP085478.1 RefSeq gene 2060397 2061509 . - . ID=gene-LI478_RS09990;Name=ydiK;gbkey=Gene;gene=ydiK;gene_biotype=protein_coding;locus_tag=LI478_RS09990 NZ_CP085478.1 Protein Homology CDS 2060397 2061509 . - 0 ID=cds-WP_004148729.1;Parent=gene-LI478_RS09990;Dbxref=Genbank:WP_004148729.1;Name=WP_004148729.1;gbkey=CDS;gene=ydiK;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227451.1;locus_tag=LI478_RS09990;product=AI-2E family transporter YdiK;protein_id=WP_004148729.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2061728 2064784 . + . ID=gene-LI478_RS09995;Name=LI478_RS09995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS09995 NZ_CP085478.1 Protein Homology CDS 2061728 2064784 . + 0 ID=cds-WP_004175614.1;Parent=gene-LI478_RS09995;Dbxref=Genbank:WP_004175614.1;Name=WP_004175614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189481.1;locus_tag=LI478_RS09995;product=FAD-binding and (Fe-S)-binding domain-containing protein;protein_id=WP_004175614.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2064781 2065191 . + . ID=gene-LI478_RS10000;Name=menI;gbkey=Gene;gene=menI;gene_biotype=protein_coding;locus_tag=LI478_RS10000 NZ_CP085478.1 Protein Homology CDS 2064781 2065191 . + 0 ID=cds-WP_002909015.1;Parent=gene-LI478_RS10000;Dbxref=Genbank:WP_002909015.1;Name=WP_002909015.1;gbkey=CDS;gene=menI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227448.1;locus_tag=LI478_RS10000;product=1%2C4-dihydroxy-2-naphthoyl-CoA hydrolase;protein_id=WP_002909015.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2065396 2065644 . + . ID=gene-LI478_RS10005;Name=LI478_RS10005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10005 NZ_CP085478.1 Protein Homology CDS 2065396 2065644 . + 0 ID=cds-WP_002909014.1;Parent=gene-LI478_RS10005;Dbxref=Genbank:WP_002909014.1;Name=WP_002909014.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227447.1;locus_tag=LI478_RS10005;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WP_002909014.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2065742 2066062 . - . ID=gene-LI478_RS10010;Name=LI478_RS10010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10010 NZ_CP085478.1 Protein Homology CDS 2065742 2066062 . - 0 ID=cds-WP_004184563.1;Parent=gene-LI478_RS10010;Dbxref=Genbank:WP_004184563.1;Name=WP_004184563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227446.1;locus_tag=LI478_RS10010;product=hypothetical protein;protein_id=WP_004184563.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2066632 2067612 . + . ID=gene-LI478_RS10015;Name=LI478_RS10015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10015 NZ_CP085478.1 Protein Homology CDS 2066632 2067612 . + 0 ID=cds-WP_002909008.1;Parent=gene-LI478_RS10015;Dbxref=Genbank:WP_002909008.1;Name=WP_002909008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227445.1;locus_tag=LI478_RS10015;product=DUF1852 domain-containing protein;protein_id=WP_002909008.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2067636 2068667 . + . ID=gene-LI478_RS10020;Name=LI478_RS10020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10020 NZ_CP085478.1 Protein Homology CDS 2067636 2068667 . + 0 ID=cds-WP_002909005.1;Parent=gene-LI478_RS10020;Dbxref=Genbank:WP_002909005.1;Name=WP_002909005.1;Ontology_term=GO:0009086,GO:0003871,GO:0008270;gbkey=CDS;go_function=5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity|0003871||IEA,zinc ion binding|0008270||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227444.1;locus_tag=LI478_RS10020;product=methionine synthase;protein_id=WP_002909005.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2068750 2069937 . - . ID=gene-LI478_RS10025;Name=LI478_RS10025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10025 NZ_CP085478.1 Protein Homology CDS 2068750 2069937 . - 0 ID=cds-WP_014343176.1;Parent=gene-LI478_RS10025;Dbxref=Genbank:WP_014343176.1;Name=WP_014343176.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227443.1;locus_tag=LI478_RS10025;product=MFS transporter;protein_id=WP_014343176.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2069994 2070755 . - . ID=gene-LI478_RS10030;Name=LI478_RS10030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10030 NZ_CP085478.1 Protein Homology CDS 2069994 2070755 . - 0 ID=cds-WP_048993261.1;Parent=gene-LI478_RS10030;Dbxref=Genbank:WP_048993261.1;Name=WP_048993261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000020503.1;locus_tag=LI478_RS10030;product=ABC transporter ATP-binding protein;protein_id=WP_048993261.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2070755 2071792 . - . ID=gene-LI478_RS10035;Name=LI478_RS10035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10035 NZ_CP085478.1 Protein Homology CDS 2070755 2071792 . - 0 ID=cds-WP_064153497.1;Parent=gene-LI478_RS10035;Dbxref=Genbank:WP_064153497.1;Name=WP_064153497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227440.1;locus_tag=LI478_RS10035;product=iron ABC transporter permease;protein_id=WP_064153497.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2071792 2072790 . - . ID=gene-LI478_RS10040;Name=LI478_RS10040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10040 NZ_CP085478.1 Protein Homology CDS 2071792 2072790 . - 0 ID=cds-WP_004200258.1;Parent=gene-LI478_RS10040;Dbxref=Genbank:WP_004200258.1;Name=WP_004200258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227439.1;locus_tag=LI478_RS10040;product=ABC transporter substrate-binding protein;protein_id=WP_004200258.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2072949 2073860 . - . ID=gene-LI478_RS10045;Name=LI478_RS10045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10045 NZ_CP085478.1 Protein Homology CDS 2072949 2073860 . - 0 ID=cds-WP_004200256.1;Parent=gene-LI478_RS10045;Dbxref=Genbank:WP_004200256.1;Name=WP_004200256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227438.1;locus_tag=LI478_RS10045;product=LysR family transcriptional regulator;protein_id=WP_004200256.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2073957 2074952 . + . ID=gene-LI478_RS10050;Name=LI478_RS10050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10050 NZ_CP085478.1 Protein Homology CDS 2073957 2074952 . + 0 ID=cds-WP_064153496.1;Parent=gene-LI478_RS10050;Dbxref=Genbank:WP_064153496.1;Name=WP_064153496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227437.1;locus_tag=LI478_RS10050;product=NAD(P)H-binding protein;protein_id=WP_064153496.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2075126 2075662 . + . ID=gene-LI478_RS10055;Name=LI478_RS10055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10055 NZ_CP085478.1 Protein Homology CDS 2075126 2075662 . + 0 ID=cds-WP_015958592.1;Parent=gene-LI478_RS10055;Dbxref=Genbank:WP_015958592.1;Name=WP_015958592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227436.1;locus_tag=LI478_RS10055;product=TetR/AcrR family transcriptional regulator;protein_id=WP_015958592.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2075737 2076846 . + . ID=gene-LI478_RS10060;Name=LI478_RS10060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10060 NZ_CP085478.1 Protein Homology CDS 2075737 2076846 . + 0 ID=cds-WP_064153492.1;Parent=gene-LI478_RS10060;Dbxref=Genbank:WP_064153492.1;Name=WP_064153492.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227435.1;locus_tag=LI478_RS10060;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_064153492.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2076843 2079935 . + . ID=gene-LI478_RS10065;Name=LI478_RS10065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10065 NZ_CP085478.1 Protein Homology CDS 2076843 2079935 . + 0 ID=cds-WP_064153490.1;Parent=gene-LI478_RS10065;Dbxref=Genbank:WP_064153490.1;Name=WP_064153490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227434.1;locus_tag=LI478_RS10065;product=efflux RND transporter permease subunit;protein_id=WP_064153490.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2079991 2081175 . - . ID=gene-LI478_RS10070;Name=lldD;gbkey=Gene;gene=lldD;gene_biotype=protein_coding;locus_tag=LI478_RS10070 NZ_CP085478.1 Protein Homology CDS 2079991 2081175 . - 0 ID=cds-WP_004151846.1;Parent=gene-LI478_RS10070;Dbxref=Genbank:WP_004151846.1;Name=WP_004151846.1;Ontology_term=GO:0006089,GO:0004457,GO:0010181;gbkey=CDS;gene=lldD;go_function=lactate dehydrogenase activity|0004457||IEA,FMN binding|0010181||IEA;go_process=lactate metabolic process|0006089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227433.1;locus_tag=LI478_RS10070;product=FMN-dependent L-lactate dehydrogenase LldD;protein_id=WP_004151846.1;transl_table=11 NZ_CP085478.1 RefSeq pseudogene 2081464 2081556 . - . ID=gene-LI478_RS10075;Name=LI478_RS10075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS10075;partial=true;pseudo=true;start_range=.,2081464 NZ_CP085478.1 Protein Homology CDS 2081464 2081556 . - 0 ID=cds-LI478_RS10075;Parent=gene-LI478_RS10075;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227430.1;locus_tag=LI478_RS10075;partial=true;product=hypothetical protein;pseudo=true;start_range=.,2081464;transl_table=11 NZ_CP085478.1 RefSeq gene 2081555 2081752 . + . ID=gene-LI478_RS10080;Name=LI478_RS10080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10080 NZ_CP085478.1 Protein Homology CDS 2081555 2081752 . + 0 ID=cds-WP_002908880.1;Parent=gene-LI478_RS10080;Dbxref=Genbank:WP_002908880.1;Name=WP_002908880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227429.1;locus_tag=LI478_RS10080;product=hypothetical protein;protein_id=WP_002908880.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2082236 2082613 . + . ID=gene-LI478_RS10085;Name=sufA;gbkey=Gene;gene=sufA;gene_biotype=protein_coding;locus_tag=LI478_RS10085 NZ_CP085478.1 Protein Homology CDS 2082236 2082613 . + 0 ID=cds-WP_004143232.1;Parent=gene-LI478_RS10085;Dbxref=Genbank:WP_004143232.1;Name=WP_004143232.1;gbkey=CDS;gene=sufA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227426.1;locus_tag=LI478_RS10085;product=Fe-S cluster assembly scaffold SufA;protein_id=WP_004143232.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2082616 2084103 . + . ID=gene-LI478_RS10090;Name=sufB;gbkey=Gene;gene=sufB;gene_biotype=protein_coding;locus_tag=LI478_RS10090 NZ_CP085478.1 Protein Homology CDS 2082616 2084103 . + 0 ID=cds-WP_004212488.1;Parent=gene-LI478_RS10090;Dbxref=Genbank:WP_004212488.1;Name=WP_004212488.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufB;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227425.1;locus_tag=LI478_RS10090;product=Fe-S cluster assembly protein SufB;protein_id=WP_004212488.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2084120 2084866 . + . ID=gene-LI478_RS10095;Name=sufC;gbkey=Gene;gene=sufC;gene_biotype=protein_coding;locus_tag=LI478_RS10095 NZ_CP085478.1 Protein Homology CDS 2084120 2084866 . + 0 ID=cds-WP_048270761.1;Parent=gene-LI478_RS10095;Dbxref=Genbank:WP_048270761.1;Name=WP_048270761.1;Ontology_term=GO:0005524;gbkey=CDS;gene=sufC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500629.1;locus_tag=LI478_RS10095;product=Fe-S cluster assembly ATPase SufC;protein_id=WP_048270761.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2084841 2086115 . + . ID=gene-LI478_RS10100;Name=sufD;gbkey=Gene;gene=sufD;gene_biotype=protein_coding;locus_tag=LI478_RS10100 NZ_CP085478.1 Protein Homology CDS 2084841 2086115 . + 0 ID=cds-WP_064277295.1;Parent=gene-LI478_RS10100;Dbxref=Genbank:WP_064277295.1;Name=WP_064277295.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufD;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227423.1;locus_tag=LI478_RS10100;product=Fe-S cluster assembly protein SufD;protein_id=WP_064277295.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2086112 2087332 . + . ID=gene-LI478_RS10105;Name=sufS;gbkey=Gene;gene=sufS;gene_biotype=protein_coding;locus_tag=LI478_RS10105 NZ_CP085478.1 Protein Homology CDS 2086112 2087332 . + 0 ID=cds-WP_023316988.1;Parent=gene-LI478_RS10105;Dbxref=Genbank:WP_023316988.1;Name=WP_023316988.1;Ontology_term=GO:0006534,GO:0030170,GO:0031071;gbkey=CDS;gene=sufS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=cysteine metabolic process|0006534||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227422.1;locus_tag=LI478_RS10105;product=cysteine desulfurase SufS;protein_id=WP_023316988.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2087344 2087760 . + . ID=gene-LI478_RS10110;Name=sufE;gbkey=Gene;gene=sufE;gene_biotype=protein_coding;locus_tag=LI478_RS10110 NZ_CP085478.1 Protein Homology CDS 2087344 2087760 . + 0 ID=cds-WP_002908865.1;Parent=gene-LI478_RS10110;Dbxref=Genbank:WP_002908865.1;Name=WP_002908865.1;gbkey=CDS;gene=sufE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227421.1;locus_tag=LI478_RS10110;product=cysteine desulfuration protein SufE;protein_id=WP_002908865.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2087860 2088846 . + . ID=gene-LI478_RS10115;Name=LI478_RS10115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10115 NZ_CP085478.1 Protein Homology CDS 2087860 2088846 . + 0 ID=cds-WP_004143241.1;Parent=gene-LI478_RS10115;Dbxref=Genbank:WP_004143241.1;Name=WP_004143241.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227420.1;locus_tag=LI478_RS10115;product=L%2CD-transpeptidase family protein;protein_id=WP_004143241.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2088908 2089144 . - . ID=gene-LI478_RS10120;Name=LI478_RS10120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10120 NZ_CP085478.1 Protein Homology CDS 2088908 2089144 . - 0 ID=cds-WP_002908860.1;Parent=gene-LI478_RS10120;Dbxref=Genbank:WP_002908860.1;Name=WP_002908860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004157411.1;locus_tag=LI478_RS10120;product=major outer membrane lipoprotein;protein_id=WP_002908860.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2089457 2090869 . - . ID=gene-LI478_RS10125;Name=pykF;gbkey=Gene;gene=pykF;gene_biotype=protein_coding;locus_tag=LI478_RS10125 NZ_CP085478.1 Protein Homology CDS 2089457 2090869 . - 0 ID=cds-WP_002908859.1;Parent=gene-LI478_RS10125;Dbxref=Genbank:WP_002908859.1;Name=WP_002908859.1;Ontology_term=GO:0006096,GO:0004743;gbkey=CDS;gene=pykF;go_function=pyruvate kinase activity|0004743||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010346010.1;locus_tag=LI478_RS10125;product=pyruvate kinase PykF;protein_id=WP_002908859.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2091007 2091138 . + . ID=gene-LI478_RS10130;Name=LI478_RS10130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10130 NZ_CP085478.1 Protein Homology CDS 2091007 2091138 . + 0 ID=cds-WP_004217210.1;Parent=gene-LI478_RS10130;Dbxref=Genbank:WP_004217210.1;Name=WP_004217210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227417.1;locus_tag=LI478_RS10130;product=hypothetical protein;protein_id=WP_004217210.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2091227 2091385 . + . ID=gene-LI478_RS10135;Name=LI478_RS10135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10135 NZ_CP085478.1 Protein Homology CDS 2091227 2091385 . + 0 ID=cds-WP_004143246.1;Parent=gene-LI478_RS10135;Dbxref=Genbank:WP_004143246.1;Name=WP_004143246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227416.1;locus_tag=LI478_RS10135;product=hypothetical protein;protein_id=WP_004143246.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2091375 2091587 . + . ID=gene-LI478_RS10140;Name=fumD;gbkey=Gene;gene=fumD;gene_biotype=protein_coding;locus_tag=LI478_RS10140 NZ_CP085478.1 Protein Homology CDS 2091375 2091587 . + 0 ID=cds-WP_004180357.1;Parent=gene-LI478_RS10140;Dbxref=Genbank:WP_004180357.1;Name=WP_004180357.1;gbkey=CDS;gene=fumD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227415.1;locus_tag=LI478_RS10140;product=fumarate hydratase FumD;protein_id=WP_004180357.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2091605 2092243 . - . ID=gene-LI478_RS10145;Name=LI478_RS10145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10145 NZ_CP085478.1 Protein Homology CDS 2091605 2092243 . - 0 ID=cds-WP_002908844.1;Parent=gene-LI478_RS10145;Dbxref=Genbank:WP_002908844.1;Name=WP_002908844.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227414.1;locus_tag=LI478_RS10145;product=TetR family transcriptional regulator;protein_id=WP_002908844.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2092370 2094223 . + . ID=gene-LI478_RS10150;Name=LI478_RS10150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10150 NZ_CP085478.1 Protein Homology CDS 2092370 2094223 . + 0 ID=cds-WP_020803574.1;Parent=gene-LI478_RS10150;Dbxref=Genbank:WP_020803574.1;Name=WP_020803574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227413.1;locus_tag=LI478_RS10150;product=sugar phosphate isomerase/epimerase and 4-hydroxyphenylpyruvate domain-containing protein;protein_id=WP_020803574.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2094295 2095617 . + . ID=gene-LI478_RS10155;Name=LI478_RS10155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10155 NZ_CP085478.1 Protein Homology CDS 2094295 2095617 . + 0 ID=cds-WP_064153486.1;Parent=gene-LI478_RS10155;Dbxref=Genbank:WP_064153486.1;Name=WP_064153486.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227412.1;locus_tag=LI478_RS10155;product=MFS transporter;protein_id=WP_064153486.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2095633 2096469 . + . ID=gene-LI478_RS10160;Name=LI478_RS10160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10160 NZ_CP085478.1 Protein Homology CDS 2095633 2096469 . + 0 ID=cds-WP_004189497.1;Parent=gene-LI478_RS10160;Dbxref=Genbank:WP_004189497.1;Name=WP_004189497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227411.1;locus_tag=LI478_RS10160;product=shikimate 5-dehydrogenase;protein_id=WP_004189497.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2096526 2097269 . + . ID=gene-LI478_RS10165;Name=LI478_RS10165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10165 NZ_CP085478.1 Protein Homology CDS 2096526 2097269 . + 0 ID=cds-WP_064153484.1;Parent=gene-LI478_RS10165;Dbxref=Genbank:WP_064153484.1;Name=WP_064153484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227410.1;locus_tag=LI478_RS10165;product=substrate-binding domain-containing protein;protein_id=WP_064153484.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2097253 2098002 . - . ID=gene-LI478_RS10170;Name=LI478_RS10170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10170 NZ_CP085478.1 Protein Homology CDS 2097253 2098002 . - 0 ID=cds-WP_004151841.1;Parent=gene-LI478_RS10170;Dbxref=Genbank:WP_004151841.1;Name=WP_004151841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227409.1;locus_tag=LI478_RS10170;product=ABC transporter ATP-binding protein;protein_id=WP_004151841.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2097999 2099006 . - . ID=gene-LI478_RS10175;Name=LI478_RS10175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10175 NZ_CP085478.1 Protein Homology CDS 2097999 2099006 . - 0 ID=cds-WP_064153482.1;Parent=gene-LI478_RS10175;Dbxref=Genbank:WP_064153482.1;Name=WP_064153482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227408.1;locus_tag=LI478_RS10175;product=iron ABC transporter permease;protein_id=WP_064153482.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2098996 2100054 . - . ID=gene-LI478_RS10180;Name=LI478_RS10180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10180 NZ_CP085478.1 Protein Homology CDS 2098996 2100054 . - 0 ID=cds-WP_064153480.1;Parent=gene-LI478_RS10180;Dbxref=Genbank:WP_064153480.1;Name=WP_064153480.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227407.1;locus_tag=LI478_RS10180;product=ABC transporter substrate-binding protein;protein_id=WP_064153480.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2100146 2100958 . - . ID=gene-LI478_RS10185;Name=LI478_RS10185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10185 NZ_CP085478.1 Protein Homology CDS 2100146 2100958 . - 0 ID=cds-WP_004891228.1;Parent=gene-LI478_RS10185;Dbxref=Genbank:WP_004891228.1;Name=WP_004891228.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227406.1;locus_tag=LI478_RS10185;product=DNA-binding transcriptional regulator;protein_id=WP_004891228.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2101137 2102801 . + . ID=gene-LI478_RS10190;Name=LI478_RS10190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10190 NZ_CP085478.1 Protein Homology CDS 2101137 2102801 . + 0 ID=cds-WP_064153476.1;Parent=gene-LI478_RS10190;Dbxref=Genbank:WP_064153476.1;Name=WP_064153476.1;Ontology_term=GO:0019622,GO:0008688;gbkey=CDS;go_function=3-(3-hydroxyphenyl)propionate hydroxylase activity|0008688||IEA;go_process=3-(3-hydroxy)phenylpropionate catabolic process|0019622||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227405.1;locus_tag=LI478_RS10190;product=bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase;protein_id=WP_064153476.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2102803 2103747 . + . ID=gene-LI478_RS10195;Name=mhpB;gbkey=Gene;gene=mhpB;gene_biotype=protein_coding;locus_tag=LI478_RS10195 NZ_CP085478.1 Protein Homology CDS 2102803 2103747 . + 0 ID=cds-WP_064153474.1;Parent=gene-LI478_RS10195;Dbxref=Genbank:WP_064153474.1;Name=WP_064153474.1;Ontology_term=GO:0019439,GO:0047070;gbkey=CDS;gene=mhpB;go_function=3-carboxyethylcatechol 2%2C3-dioxygenase activity|0047070||IEA;go_process=aromatic compound catabolic process|0019439||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016947516.1;locus_tag=LI478_RS10195;product=3-carboxyethylcatechol 2%2C3-dioxygenase;protein_id=WP_064153474.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2103765 2104631 . + . ID=gene-LI478_RS10200;Name=LI478_RS10200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10200 NZ_CP085478.1 Protein Homology CDS 2103765 2104631 . + 0 ID=cds-WP_064153472.1;Parent=gene-LI478_RS10200;Dbxref=Genbank:WP_064153472.1;Name=WP_064153472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227402.1;locus_tag=LI478_RS10200;product=alpha/beta fold hydrolase;protein_id=WP_064153472.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2104642 2105448 . + . ID=gene-LI478_RS10205;Name=mhpD;gbkey=Gene;gene=mhpD;gene_biotype=protein_coding;locus_tag=LI478_RS10205 NZ_CP085478.1 Protein Homology CDS 2104642 2105448 . + 0 ID=cds-WP_002908598.1;Parent=gene-LI478_RS10205;Dbxref=Genbank:WP_002908598.1;Name=WP_002908598.1;Ontology_term=GO:0019439,GO:0008684,GO:0030145;gbkey=CDS;gene=mhpD;go_function=2-oxopent-4-enoate hydratase activity|0008684||IEA,manganese ion binding|0030145||IEA;go_process=aromatic compound catabolic process|0019439||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227401.1;locus_tag=LI478_RS10205;product=2-keto-4-pentenoate hydratase;protein_id=WP_002908598.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2105441 2106391 . + . ID=gene-LI478_RS10210;Name=LI478_RS10210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10210 NZ_CP085478.1 Protein Homology CDS 2105441 2106391 . + 0 ID=cds-WP_060611832.1;Parent=gene-LI478_RS10210;Dbxref=Genbank:WP_060611832.1;Name=WP_060611832.1;Ontology_term=GO:0008774;gbkey=CDS;go_function=acetaldehyde dehydrogenase (acetylating) activity|0008774||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227400.1;locus_tag=LI478_RS10210;product=acetaldehyde dehydrogenase (acetylating);protein_id=WP_060611832.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2106388 2107404 . + . ID=gene-LI478_RS10215;Name=dmpG;gbkey=Gene;gene=dmpG;gene_biotype=protein_coding;locus_tag=LI478_RS10215 NZ_CP085478.1 Protein Homology CDS 2106388 2107404 . + 0 ID=cds-WP_032417249.1;Parent=gene-LI478_RS10215;Dbxref=Genbank:WP_032417249.1;Name=WP_032417249.1;Ontology_term=GO:0008701;gbkey=CDS;gene=dmpG;go_function=4-hydroxy-2-oxovalerate aldolase activity|0008701||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019705824.1;locus_tag=LI478_RS10215;product=4-hydroxy-2-oxovalerate aldolase;protein_id=WP_032417249.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2107480 2108676 . + . ID=gene-LI478_RS10220;Name=mhpT;gbkey=Gene;gene=mhpT;gene_biotype=protein_coding;locus_tag=LI478_RS10220 NZ_CP085478.1 Protein Homology CDS 2107480 2108676 . + 0 ID=cds-WP_004180339.1;Parent=gene-LI478_RS10220;Dbxref=Genbank:WP_004180339.1;Name=WP_004180339.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mhpT;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227398.1;locus_tag=LI478_RS10220;product=3-(3-hydroxy-phenyl)propionate transporter MhpT;protein_id=WP_004180339.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2108779 2109504 . + . ID=gene-LI478_RS10225;Name=LI478_RS10225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10225 NZ_CP085478.1 Protein Homology CDS 2108779 2109504 . + 0 ID=cds-WP_064153470.1;Parent=gene-LI478_RS10225;Dbxref=Genbank:WP_064153470.1;Name=WP_064153470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227397.1;locus_tag=LI478_RS10225;product=polyphenol oxidase family protein;protein_id=WP_064153470.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2109517 2111097 . - . ID=gene-LI478_RS10230;Name=LI478_RS10230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10230 NZ_CP085478.1 Protein Homology CDS 2109517 2111097 . - 0 ID=cds-WP_064153468.1;Parent=gene-LI478_RS10230;Dbxref=Genbank:WP_064153468.1;Name=WP_064153468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227396.1;locus_tag=LI478_RS10230;product=rhodanese homology domain-containing protein;protein_id=WP_064153468.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2111103 2111705 . - . ID=gene-LI478_RS10235;Name=LI478_RS10235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10235 NZ_CP085478.1 Protein Homology CDS 2111103 2111705 . - 0 ID=cds-WP_002908526.1;Parent=gene-LI478_RS10235;Dbxref=Genbank:WP_002908526.1;Name=WP_002908526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189520.1;locus_tag=LI478_RS10235;product=cysteine dioxygenase;protein_id=WP_002908526.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2111812 2112705 . + . ID=gene-LI478_RS10240;Name=LI478_RS10240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10240 NZ_CP085478.1 Protein Homology CDS 2111812 2112705 . + 0 ID=cds-WP_040215607.1;Parent=gene-LI478_RS10240;Dbxref=Genbank:WP_040215607.1;Name=WP_040215607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227394.1;locus_tag=LI478_RS10240;product=LysR family transcriptional regulator;protein_id=WP_040215607.1;transl_table=11 NZ_CP085478.1 RefSeq pseudogene 2112850 2113945 . + . ID=gene-LI478_RS10245;Name=LI478_RS10245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS10245;pseudo=true NZ_CP085478.1 Protein Homology CDS 2112850 2113945 . + 0 ID=cds-LI478_RS10245;Parent=gene-LI478_RS10245;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227393.1;locus_tag=LI478_RS10245;product=LLM class flavin-dependent oxidoreductase;pseudo=true;transl_table=11 NZ_CP085478.1 RefSeq gene 2113932 2115083 . + . ID=gene-LI478_RS10250;Name=LI478_RS10250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10250 NZ_CP085478.1 Protein Homology CDS 2113932 2115083 . + 0 ID=cds-WP_023287736.1;Parent=gene-LI478_RS10250;Dbxref=Genbank:WP_023287736.1;Name=WP_023287736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227392.1;locus_tag=LI478_RS10250;product=acyl-CoA dehydrogenase family protein;protein_id=WP_023287736.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2115089 2116051 . + . ID=gene-LI478_RS10255;Name=LI478_RS10255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10255 NZ_CP085478.1 Protein Homology CDS 2115089 2116051 . + 0 ID=cds-WP_004175710.1;Parent=gene-LI478_RS10255;Dbxref=Genbank:WP_004175710.1;Name=WP_004175710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227391.1;locus_tag=LI478_RS10255;product=ABC transporter substrate-binding protein;protein_id=WP_004175710.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2116048 2117085 . + . ID=gene-LI478_RS10260;Name=LI478_RS10260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10260 NZ_CP085478.1 Protein Homology CDS 2116048 2117085 . + 0 ID=cds-WP_064153466.1;Parent=gene-LI478_RS10260;Dbxref=Genbank:WP_064153466.1;Name=WP_064153466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227390.1;locus_tag=LI478_RS10260;product=ABC transporter substrate-binding protein;protein_id=WP_064153466.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2117066 2118061 . + . ID=gene-LI478_RS10265;Name=LI478_RS10265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10265 NZ_CP085478.1 Protein Homology CDS 2117066 2118061 . + 0 ID=cds-WP_064153464.1;Parent=gene-LI478_RS10265;Dbxref=Genbank:WP_064153464.1;Name=WP_064153464.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227389.1;locus_tag=LI478_RS10265;product=ABC transporter permease subunit;protein_id=WP_064153464.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2118055 2118828 . + . ID=gene-LI478_RS10270;Name=LI478_RS10270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10270 NZ_CP085478.1 Protein Homology CDS 2118055 2118828 . + 0 ID=cds-WP_002908439.1;Parent=gene-LI478_RS10270;Dbxref=Genbank:WP_002908439.1;Name=WP_002908439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227388.1;locus_tag=LI478_RS10270;product=ABC transporter ATP-binding protein;protein_id=WP_002908439.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2119056 2121128 . - . ID=gene-LI478_RS10275;Name=LI478_RS10275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10275 NZ_CP085478.1 Protein Homology CDS 2119056 2121128 . - 0 ID=cds-WP_004891261.1;Parent=gene-LI478_RS10275;Dbxref=Genbank:WP_004891261.1;Name=WP_004891261.1;Ontology_term=GO:0015891,GO:0015343,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_function=siderophore-iron transmembrane transporter activity|0015343||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227387.1;locus_tag=LI478_RS10275;product=TonB-dependent siderophore receptor;protein_id=WP_004891261.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2121634 2122455 . + . ID=gene-LI478_RS10280;Name=LI478_RS10280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10280 NZ_CP085478.1 Protein Homology CDS 2121634 2122455 . + 0 ID=cds-WP_002908416.1;Parent=gene-LI478_RS10280;Dbxref=Genbank:WP_002908416.1;Name=WP_002908416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227386.1;locus_tag=LI478_RS10280;product=ABC transporter ATP-binding protein;protein_id=WP_002908416.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2122452 2123477 . + . ID=gene-LI478_RS10285;Name=LI478_RS10285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10285 NZ_CP085478.1 Protein Homology CDS 2122452 2123477 . + 0 ID=cds-WP_032431904.1;Parent=gene-LI478_RS10285;Dbxref=Genbank:WP_032431904.1;Name=WP_032431904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227385.1;locus_tag=LI478_RS10285;product=iron ABC transporter permease;protein_id=WP_032431904.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2123474 2124526 . + . ID=gene-LI478_RS10290;Name=LI478_RS10290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10290 NZ_CP085478.1 Protein Homology CDS 2123474 2124526 . + 0 ID=cds-WP_004175715.1;Parent=gene-LI478_RS10290;Dbxref=Genbank:WP_004175715.1;Name=WP_004175715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004143336.1;locus_tag=LI478_RS10290;product=iron ABC transporter permease;protein_id=WP_004175715.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2124516 2125493 . + . ID=gene-LI478_RS10295;Name=LI478_RS10295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10295 NZ_CP085478.1 Protein Homology CDS 2124516 2125493 . + 0 ID=cds-WP_072201242.1;Parent=gene-LI478_RS10295;Dbxref=Genbank:WP_072201242.1;Name=WP_072201242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227383.1;locus_tag=LI478_RS10295;product=ABC transporter substrate-binding protein;protein_id=WP_072201242.1;transl_table=11 NZ_CP085478.1 RefSeq pseudogene 2125459 2126392 . + . ID=gene-LI478_RS10300;Name=LI478_RS10300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS10300;pseudo=true NZ_CP085478.1 Protein Homology CDS 2125459 2126392 . + 0 ID=cds-LI478_RS10300;Parent=gene-LI478_RS10300;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227382.1;locus_tag=LI478_RS10300;product=MurR/RpiR family transcriptional regulator;pseudo=true;transl_table=11 NZ_CP085478.1 RefSeq gene 2126485 2127252 . + . ID=gene-LI478_RS10305;Name=LI478_RS10305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10305 NZ_CP085478.1 Protein Homology CDS 2126485 2127252 . + 0 ID=cds-WP_032421441.1;Parent=gene-LI478_RS10305;Dbxref=Genbank:WP_032421441.1;Name=WP_032421441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227380.1;locus_tag=LI478_RS10305;product=basic amino acid ABC transporter substrate-binding protein;protein_id=WP_032421441.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2127316 2128080 . + . ID=gene-LI478_RS10310;Name=LI478_RS10310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10310 NZ_CP085478.1 Protein Homology CDS 2127316 2128080 . + 0 ID=cds-WP_004151161.1;Parent=gene-LI478_RS10310;Dbxref=Genbank:WP_004151161.1;Name=WP_004151161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227379.1;locus_tag=LI478_RS10310;product=amino acid ABC transporter permease;protein_id=WP_004151161.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2128067 2128789 . + . ID=gene-LI478_RS10315;Name=LI478_RS10315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10315 NZ_CP085478.1 Protein Homology CDS 2128067 2128789 . + 0 ID=cds-WP_002908374.1;Parent=gene-LI478_RS10315;Dbxref=Genbank:WP_002908374.1;Name=WP_002908374.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227378.1;locus_tag=LI478_RS10315;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_002908374.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2129089 2129676 . + . ID=gene-LI478_RS10320;Name=LI478_RS10320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10320 NZ_CP085478.1 Protein Homology CDS 2129089 2129676 . + 0 ID=cds-WP_021440293.1;Parent=gene-LI478_RS10320;Dbxref=Genbank:WP_021440293.1;Name=WP_021440293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227377.1;locus_tag=LI478_RS10320;product=DUF1062 domain-containing protein;protein_id=WP_021440293.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2129805 2130197 . - . ID=gene-LI478_RS10325;Name=LI478_RS10325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10325 NZ_CP085478.1 Protein Homology CDS 2129805 2130197 . - 0 ID=cds-WP_002908370.1;Parent=gene-LI478_RS10325;Dbxref=Genbank:WP_002908370.1;Name=WP_002908370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227376.1;locus_tag=LI478_RS10325;product=VOC family protein;protein_id=WP_002908370.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2130234 2131466 . - . ID=gene-LI478_RS10330;Name=LI478_RS10330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10330 NZ_CP085478.1 Protein Homology CDS 2130234 2131466 . - 0 ID=cds-WP_023285249.1;Parent=gene-LI478_RS10330;Dbxref=Genbank:WP_023285249.1;Name=WP_023285249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227375.1;locus_tag=LI478_RS10330;product=multidrug efflux MFS transporter MdtM;protein_id=WP_023285249.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2132032 2132466 . - . ID=gene-LI478_RS10335;Name=LI478_RS10335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10335 NZ_CP085478.1 Protein Homology CDS 2132032 2132466 . - 0 ID=cds-WP_004175720.1;Parent=gene-LI478_RS10335;Dbxref=Genbank:WP_004175720.1;Name=WP_004175720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227374.1;locus_tag=LI478_RS10335;product=VOC family protein;protein_id=WP_004175720.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2132583 2133782 . - . ID=gene-LI478_RS10340;Name=LI478_RS10340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10340 NZ_CP085478.1 Protein Homology CDS 2132583 2133782 . - 0 ID=cds-WP_004148650.1;Parent=gene-LI478_RS10340;Dbxref=Genbank:WP_004148650.1;Name=WP_004148650.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227373.1;locus_tag=LI478_RS10340;product=MFS transporter;protein_id=WP_004148650.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2134078 2135235 . + . ID=gene-LI478_RS10345;Name=LI478_RS10345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10345 NZ_CP085478.1 Protein Homology CDS 2134078 2135235 . + 0 ID=cds-WP_040089219.1;Parent=gene-LI478_RS10345;Dbxref=Genbank:WP_040089219.1;Name=WP_040089219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016161261.1;locus_tag=LI478_RS10345;product=M20 family metallopeptidase;protein_id=WP_040089219.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2135278 2137428 . - . ID=gene-LI478_RS10350;Name=fdhF;gbkey=Gene;gene=fdhF;gene_biotype=protein_coding;locus_tag=LI478_RS10350 NZ_CP085478.1 Protein Homology CDS 2135278 2137428 . - 0 ID=cds-WP_004184357.1;Parent=gene-LI478_RS10350;Dbxref=Genbank:WP_004184357.1;Name=WP_004184357.1;Ontology_term=GO:0015942,GO:0008863,GO:0009326;gbkey=CDS;gene=fdhF;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004180308.1;locus_tag=LI478_RS10350;product=formate dehydrogenase subunit alpha;protein_id=WP_004184357.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2137675 2138754 . - . ID=gene-LI478_RS10355;Name=LI478_RS10355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10355 NZ_CP085478.1 Protein Homology CDS 2137675 2138754 . - 0 ID=cds-WP_032415099.1;Parent=gene-LI478_RS10355;Dbxref=Genbank:WP_032415099.1;Name=WP_032415099.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227369.1;locus_tag=LI478_RS10355;product=malate/lactate/ureidoglycolate dehydrogenase;protein_id=WP_032415099.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2139057 2140145 . + . ID=gene-LI478_RS10360;Name=LI478_RS10360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10360 NZ_CP085478.1 Protein Homology CDS 2139057 2140145 . + 0 ID=cds-WP_002908297.1;Parent=gene-LI478_RS10360;Dbxref=Genbank:WP_002908297.1;Name=WP_002908297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227367.1;locus_tag=LI478_RS10360;product=ABC transporter substrate-binding protein;protein_id=WP_002908297.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2140220 2141989 . + . ID=gene-LI478_RS10365;Name=LI478_RS10365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10365 NZ_CP085478.1 Protein Homology CDS 2140220 2141989 . + 0 ID=cds-WP_008804520.1;Parent=gene-LI478_RS10365;Dbxref=Genbank:WP_008804520.1;Name=WP_008804520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227366.1;locus_tag=LI478_RS10365;product=iron ABC transporter permease;protein_id=WP_008804520.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2141982 2143052 . + . ID=gene-LI478_RS10370;Name=LI478_RS10370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10370 NZ_CP085478.1 Protein Homology CDS 2141982 2143052 . + 0 ID=cds-WP_002908292.1;Parent=gene-LI478_RS10370;Dbxref=Genbank:WP_002908292.1;Name=WP_002908292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227365.1;locus_tag=LI478_RS10370;product=ABC transporter ATP-binding protein;protein_id=WP_002908292.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2143060 2143431 . - . ID=gene-LI478_RS10375;Name=LI478_RS10375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10375 NZ_CP085478.1 Protein Homology CDS 2143060 2143431 . - 0 ID=cds-WP_002908289.1;Parent=gene-LI478_RS10375;Dbxref=Genbank:WP_002908289.1;Name=WP_002908289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227364.1;locus_tag=LI478_RS10375;product=VOC family protein;protein_id=WP_002908289.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2143933 2144688 . + . ID=gene-LI478_RS10380;Name=LI478_RS10380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10380 NZ_CP085478.1 Protein Homology CDS 2143933 2144688 . + 0 ID=cds-WP_004175724.1;Parent=gene-LI478_RS10380;Dbxref=Genbank:WP_004175724.1;Name=WP_004175724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227363.1;locus_tag=LI478_RS10380;product=gluconate 2-dehydrogenase subunit 3 family protein;protein_id=WP_004175724.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2144691 2146475 . + . ID=gene-LI478_RS10385;Name=LI478_RS10385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10385 NZ_CP085478.1 Protein Homology CDS 2144691 2146475 . + 0 ID=cds-WP_029883976.1;Parent=gene-LI478_RS10385;Dbxref=Genbank:WP_029883976.1;Name=WP_029883976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227362.1;locus_tag=LI478_RS10385;product=GMC family oxidoreductase;protein_id=WP_029883976.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2146486 2147826 . + . ID=gene-LI478_RS10390;Name=LI478_RS10390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10390 NZ_CP085478.1 Protein Homology CDS 2146486 2147826 . + 0 ID=cds-WP_072198173.1;Parent=gene-LI478_RS10390;Dbxref=Genbank:WP_072198173.1;Name=WP_072198173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227361.1;locus_tag=LI478_RS10390;product=cytochrome c;protein_id=WP_072198173.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2147910 2148533 . + . ID=gene-LI478_RS10395;Name=ccmA;gbkey=Gene;gene=ccmA;gene_biotype=protein_coding;locus_tag=LI478_RS10395 NZ_CP085478.1 Protein Homology CDS 2147910 2148533 . + 0 ID=cds-WP_004184335.1;Parent=gene-LI478_RS10395;Dbxref=Genbank:WP_004184335.1;Name=WP_004184335.1;Ontology_term=GO:0017004,GO:0005524,GO:0022857;gbkey=CDS;gene=ccmA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227360.1;locus_tag=LI478_RS10395;product=cytochrome c biogenesis heme-transporting ATPase CcmA;protein_id=WP_004184335.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2148530 2149189 . + . ID=gene-LI478_RS10400;Name=ccmB;gbkey=Gene;gene=ccmB;gene_biotype=protein_coding;locus_tag=LI478_RS10400 NZ_CP085478.1 Protein Homology CDS 2148530 2149189 . + 0 ID=cds-WP_004891310.1;Parent=gene-LI478_RS10400;Dbxref=Genbank:WP_004891310.1;Name=WP_004891310.1;Ontology_term=GO:0015886,GO:0015232;gbkey=CDS;gene=ccmB;go_function=heme transmembrane transporter activity|0015232||IEA;go_process=heme transport|0015886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227359.1;locus_tag=LI478_RS10400;product=heme exporter protein CcmB;protein_id=WP_004891310.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2149239 2149976 . + . ID=gene-LI478_RS10405;Name=LI478_RS10405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10405 NZ_CP085478.1 Protein Homology CDS 2149239 2149976 . + 0 ID=cds-WP_004189553.1;Parent=gene-LI478_RS10405;Dbxref=Genbank:WP_004189553.1;Name=WP_004189553.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227358.1;locus_tag=LI478_RS10405;product=heme ABC transporter permease;protein_id=WP_004189553.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2149973 2150203 . + . ID=gene-LI478_RS10410;Name=ccmD;gbkey=Gene;gene=ccmD;gene_biotype=protein_coding;locus_tag=LI478_RS10410 NZ_CP085478.1 Protein Homology CDS 2149973 2150203 . + 0 ID=cds-WP_002908220.1;Parent=gene-LI478_RS10410;Dbxref=Genbank:WP_002908220.1;Name=WP_002908220.1;Ontology_term=GO:0015886,GO:0017004,GO:0016020;gbkey=CDS;gene=ccmD;go_component=membrane|0016020||IEA;go_process=heme transport|0015886||IEA,cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227357.1;locus_tag=LI478_RS10410;product=heme exporter protein CcmD;protein_id=WP_002908220.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2150187 2150645 . + . ID=gene-LI478_RS10415;Name=ccmE;gbkey=Gene;gene=ccmE;gene_biotype=protein_coding;locus_tag=LI478_RS10415 NZ_CP085478.1 Protein Homology CDS 2150187 2150645 . + 0 ID=cds-WP_004200190.1;Parent=gene-LI478_RS10415;Dbxref=Genbank:WP_004200190.1;Name=WP_004200190.1;Ontology_term=GO:0017004,GO:0020037,GO:0005886;gbkey=CDS;gene=ccmE;go_component=plasma membrane|0005886||IEA;go_function=heme binding|0020037||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227356.1;locus_tag=LI478_RS10415;product=cytochrome c maturation protein CcmE;protein_id=WP_004200190.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2150642 2152594 . + . ID=gene-LI478_RS10420;Name=LI478_RS10420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10420 NZ_CP085478.1 Protein Homology CDS 2150642 2152594 . + 0 ID=cds-WP_064153460.1;Parent=gene-LI478_RS10420;Dbxref=Genbank:WP_064153460.1;Name=WP_064153460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227355.1;locus_tag=LI478_RS10420;product=heme lyase CcmF/NrfE family subunit;protein_id=WP_064153460.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2152591 2153145 . + . ID=gene-LI478_RS10425;Name=LI478_RS10425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10425 NZ_CP085478.1 Protein Homology CDS 2152591 2153145 . + 0 ID=cds-WP_004189556.1;Parent=gene-LI478_RS10425;Dbxref=Genbank:WP_004189556.1;Name=WP_004189556.1;Ontology_term=GO:0017004,GO:0015036,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=disulfide oxidoreductase activity|0015036||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227354.1;locus_tag=LI478_RS10425;product=DsbE family thiol:disulfide interchange protein;protein_id=WP_004189556.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2153157 2153603 . + . ID=gene-LI478_RS10430;Name=LI478_RS10430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10430 NZ_CP085478.1 Protein Homology CDS 2153157 2153603 . + 0 ID=cds-WP_014599186.1;Parent=gene-LI478_RS10430;Dbxref=Genbank:WP_014599186.1;Name=WP_014599186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227353.1;locus_tag=LI478_RS10430;product=cytochrome c-type biogenesis protein CcmH;protein_id=WP_014599186.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2153600 2154442 . + . ID=gene-LI478_RS10435;Name=ccmI;gbkey=Gene;gene=ccmI;gene_biotype=protein_coding;locus_tag=LI478_RS10435 NZ_CP085478.1 Protein Homology CDS 2153600 2154442 . + 0 ID=cds-WP_004189559.1;Parent=gene-LI478_RS10435;Dbxref=Genbank:WP_004189559.1;Name=WP_004189559.1;Ontology_term=GO:0017004,GO:0051082;gbkey=CDS;gene=ccmI;go_function=unfolded protein binding|0051082||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004202994.1;locus_tag=LI478_RS10435;product=c-type cytochrome biogenesis protein CcmI;protein_id=WP_004189559.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2155660 2156136 . + . ID=gene-LI478_RS10440;Name=LI478_RS10440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10440 NZ_CP085478.1 Protein Homology CDS 2155660 2156136 . + 0 ID=cds-WP_004189563.1;Parent=gene-LI478_RS10440;Dbxref=Genbank:WP_004189563.1;Name=WP_004189563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004151170.1;locus_tag=LI478_RS10440;product=GNAT family N-acetyltransferase;protein_id=WP_004189563.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2156481 2156870 . + . ID=gene-LI478_RS10445;Name=LI478_RS10445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10445 NZ_CP085478.1 Protein Homology CDS 2156481 2156870 . + 0 ID=cds-WP_023287730.1;Parent=gene-LI478_RS10445;Dbxref=Genbank:WP_023287730.1;Name=WP_023287730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227350.1;locus_tag=LI478_RS10445;product=hypothetical protein;protein_id=WP_023287730.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2157652 2158014 . + . ID=gene-LI478_RS10450;Name=LI478_RS10450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10450 NZ_CP085478.1 Protein Homology CDS 2157652 2158014 . + 0 ID=cds-WP_023287729.1;Parent=gene-LI478_RS10450;Dbxref=Genbank:WP_023287729.1;Name=WP_023287729.1;Ontology_term=GO:0006810,GO:0015291;gbkey=CDS;go_function=secondary active transmembrane transporter activity|0015291||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016831876.1;locus_tag=LI478_RS10450;product=TonB family protein;protein_id=WP_023287729.1;transl_table=11 NZ_CP085478.1 RefSeq pseudogene 2158193 2159020 . + . ID=gene-LI478_RS10455;Name=LI478_RS10455;end_range=2159020,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS10455;partial=true;pseudo=true NZ_CP085478.1 Protein Homology CDS 2158193 2159020 . + 0 ID=cds-LI478_RS10455;Parent=gene-LI478_RS10455;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2159020,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227349.1;locus_tag=LI478_RS10455;partial=true;product=LD-carboxypeptidase;pseudo=true;transl_table=11 NZ_CP085478.1 RefSeq gene 2159071 2160039 . - . ID=gene-LI478_RS10460;Name=LI478_RS10460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10460 NZ_CP085478.1 Protein Homology CDS 2159071 2160039 . - 0 ID=cds-WP_004225014.1-4;Parent=gene-LI478_RS10460;Dbxref=Genbank:WP_004225014.1;Name=WP_004225014.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=LI478_RS10460;product=IS5 family transposase;protein_id=WP_004225014.1;transl_table=11 NZ_CP085478.1 RefSeq pseudogene 2160073 2160507 . - . ID=gene-LI478_RS10465;Name=ccrB;gbkey=Gene;gene=ccrB;gene_biotype=pseudogene;locus_tag=LI478_RS10465;partial=true;pseudo=true;start_range=.,2160073 NZ_CP085478.1 Protein Homology CDS 2160073 2160507 . - 0 ID=cds-LI478_RS10465;Parent=gene-LI478_RS10465;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=ccrB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227347.1;locus_tag=LI478_RS10465;partial=true;product=HAMP domain-containing histidine kinase CrrB;pseudo=true;start_range=.,2160073;transl_table=11 NZ_CP085478.1 RefSeq gene 2160504 2161208 . - . ID=gene-LI478_RS10470;Name=LI478_RS10470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10470 NZ_CP085478.1 Protein Homology CDS 2160504 2161208 . - 0 ID=cds-WP_004151175.1;Parent=gene-LI478_RS10470;Dbxref=Genbank:WP_004151175.1;Name=WP_004151175.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227346.1;locus_tag=LI478_RS10470;product=response regulator;protein_id=WP_004151175.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2161491 2161880 . + . ID=gene-LI478_RS10475;Name=LI478_RS10475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10475 NZ_CP085478.1 Protein Homology CDS 2161491 2161880 . + 0 ID=cds-WP_004219658.1;Parent=gene-LI478_RS10475;Dbxref=Genbank:WP_004219658.1;Name=WP_004219658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227345.1;locus_tag=LI478_RS10475;product=transporter;protein_id=WP_004219658.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2162110 2162994 . + . ID=gene-LI478_RS10480;Name=LI478_RS10480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10480 NZ_CP085478.1 Protein Homology CDS 2162110 2162994 . + 0 ID=cds-WP_004151176.1;Parent=gene-LI478_RS10480;Dbxref=Genbank:WP_004151176.1;Name=WP_004151176.1;Ontology_term=GO:0055085,GO:0005524,GO:0042626,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004211487.1;locus_tag=LI478_RS10480;product=ABC transporter six-transmembrane domain-containing protein;protein_id=WP_004151176.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2163032 2166148 . + . ID=gene-LI478_RS10485;Name=kexD;gbkey=Gene;gene=kexD;gene_biotype=protein_coding;locus_tag=LI478_RS10485 NZ_CP085478.1 Protein Homology CDS 2163032 2166148 . + 0 ID=cds-WP_102007306.1;Parent=gene-LI478_RS10485;Dbxref=Genbank:WP_102007306.1;Name=WP_102007306.1;gbkey=CDS;gene=kexD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227343.1;locus_tag=LI478_RS10485;product=multidrug efflux RND transporter permease subunit KexD;protein_id=WP_102007306.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2166224 2166760 . + . ID=gene-LI478_RS10490;Name=LI478_RS10490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10490 NZ_CP085478.1 Protein Homology CDS 2166224 2166760 . + 0 ID=cds-WP_102007307.1;Parent=gene-LI478_RS10490;Dbxref=Genbank:WP_102007307.1;Name=WP_102007307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227342.1;locus_tag=LI478_RS10490;product=GNAT family protein;protein_id=WP_102007307.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2166889 2167530 . - . ID=gene-LI478_RS10495;Name=LI478_RS10495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10495 NZ_CP085478.1 Protein Homology CDS 2166889 2167530 . - 0 ID=cds-WP_004145379.1;Parent=gene-LI478_RS10495;Dbxref=Genbank:WP_004145379.1;Name=WP_004145379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004200175.1;locus_tag=LI478_RS10495;product=hypothetical protein;protein_id=WP_004145379.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2167927 2168697 . - . ID=gene-LI478_RS10500;Name=LI478_RS10500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10500 NZ_CP085478.1 Protein Homology CDS 2167927 2168697 . - 0 ID=cds-WP_004151179.1;Parent=gene-LI478_RS10500;Dbxref=Genbank:WP_004151179.1;Name=WP_004151179.1;Ontology_term=GO:0045150,GO:0019152;gbkey=CDS;go_function=acetoin dehydrogenase activity|0019152||IEA;go_process=acetoin catabolic process|0045150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227341.1;locus_tag=LI478_RS10500;product=(S)-acetoin forming diacetyl reductase;protein_id=WP_004151179.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2168721 2170400 . - . ID=gene-LI478_RS10505;Name=alsS;gbkey=Gene;gene=alsS;gene_biotype=protein_coding;locus_tag=LI478_RS10505 NZ_CP085478.1 Protein Homology CDS 2168721 2170400 . - 0 ID=cds-WP_004175750.1;Parent=gene-LI478_RS10505;Dbxref=Genbank:WP_004175750.1;Name=WP_004175750.1;Ontology_term=GO:0006113,GO:0045151,GO:0003984;gbkey=CDS;gene=alsS;go_function=acetolactate synthase activity|0003984||IEA;go_process=fermentation|0006113||IEA,acetoin biosynthetic process|0045151||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227340.1;locus_tag=LI478_RS10505;product=acetolactate synthase AlsS;protein_id=WP_004175750.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2170410 2171189 . - . ID=gene-LI478_RS10510;Name=budA;gbkey=Gene;gene=budA;gene_biotype=protein_coding;locus_tag=LI478_RS10510 NZ_CP085478.1 Protein Homology CDS 2170410 2171189 . - 0 ID=cds-WP_002908205.1;Parent=gene-LI478_RS10510;Dbxref=Genbank:WP_002908205.1;Name=WP_002908205.1;Ontology_term=GO:0006113,GO:0045151,GO:0047605;gbkey=CDS;gene=budA;go_function=acetolactate decarboxylase activity|0047605||IEA;go_process=fermentation|0006113||IEA,acetoin biosynthetic process|0045151||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004180260.1;locus_tag=LI478_RS10510;product=acetolactate decarboxylase;protein_id=WP_002908205.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2171296 2172168 . + . ID=gene-LI478_RS10515;Name=LI478_RS10515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10515 NZ_CP085478.1 Protein Homology CDS 2171296 2172168 . + 0 ID=cds-WP_032417230.1;Parent=gene-LI478_RS10515;Dbxref=Genbank:WP_032417230.1;Name=WP_032417230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227338.1;locus_tag=LI478_RS10515;product=LysR family transcriptional regulator;protein_id=WP_032417230.1;transl_table=11 NZ_CP085478.1 RefSeq pseudogene 2172188 2172957 . - . ID=gene-LI478_RS10520;Name=LI478_RS10520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS10520;pseudo=true NZ_CP085478.1 Protein Homology CDS 2172188 2172957 . - 0 ID=cds-LI478_RS10520;Parent=gene-LI478_RS10520;Note=frameshifted;Ontology_term=GO:0003858;gbkey=CDS;go_function=3-hydroxybutyrate dehydrogenase activity|0003858||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227337.1;locus_tag=LI478_RS10520;product=3-hydroxybutyrate dehydrogenase;pseudo=true;transl_table=11 NZ_CP085478.1 RefSeq gene 2172981 2174375 . - . ID=gene-LI478_RS10525;Name=LI478_RS10525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10525 NZ_CP085478.1 Protein Homology CDS 2172981 2174375 . - 0 ID=cds-WP_020323796.1;Parent=gene-LI478_RS10525;Dbxref=Genbank:WP_020323796.1;Name=WP_020323796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227336.1;locus_tag=LI478_RS10525;product=GntP family permease;protein_id=WP_020323796.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2174420 2175343 . - . ID=gene-LI478_RS10530;Name=LI478_RS10530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10530 NZ_CP085478.1 Protein Homology CDS 2174420 2175343 . - 0 ID=cds-WP_032434671.1;Parent=gene-LI478_RS10530;Dbxref=Genbank:WP_032434671.1;Name=WP_032434671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227335.1;locus_tag=LI478_RS10530;product=3-hydroxyacyl-CoA dehydrogenase family protein;protein_id=WP_032434671.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2175355 2176536 . - . ID=gene-LI478_RS10535;Name=LI478_RS10535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10535 NZ_CP085478.1 Protein Homology CDS 2175355 2176536 . - 0 ID=cds-WP_064153686.1;Parent=gene-LI478_RS10535;Dbxref=Genbank:WP_064153686.1;Name=WP_064153686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008804552.1;locus_tag=LI478_RS10535;product=acetyl-CoA C-acetyltransferase;protein_id=WP_064153686.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2176546 2177202 . - . ID=gene-LI478_RS10540;Name=LI478_RS10540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10540 NZ_CP085478.1 Protein Homology CDS 2176546 2177202 . - 0 ID=cds-WP_002908192.1;Parent=gene-LI478_RS10540;Dbxref=Genbank:WP_002908192.1;Name=WP_002908192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227332.1;locus_tag=LI478_RS10540;product=CoA transferase subunit B;protein_id=WP_002908192.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2177204 2177911 . - . ID=gene-LI478_RS10545;Name=LI478_RS10545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10545 NZ_CP085478.1 Protein Homology CDS 2177204 2177911 . - 0 ID=cds-WP_004175762.1;Parent=gene-LI478_RS10545;Dbxref=Genbank:WP_004175762.1;Name=WP_004175762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227331.1;locus_tag=LI478_RS10545;product=CoA transferase subunit A;protein_id=WP_004175762.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2178052 2178942 . + . ID=gene-LI478_RS10550;Name=LI478_RS10550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10550 NZ_CP085478.1 Protein Homology CDS 2178052 2178942 . + 0 ID=cds-WP_004898701.1;Parent=gene-LI478_RS10550;Dbxref=Genbank:WP_004898701.1;Name=WP_004898701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227330.1;locus_tag=LI478_RS10550;product=LysR family transcriptional regulator;protein_id=WP_004898701.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2178987 2179127 . - . ID=gene-LI478_RS10555;Name=LI478_RS10555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10555 NZ_CP085478.1 Protein Homology CDS 2178987 2179127 . - 0 ID=cds-WP_002908189.1;Parent=gene-LI478_RS10555;Dbxref=Genbank:WP_002908189.1;Name=WP_002908189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227329.1;locus_tag=LI478_RS10555;product=hypothetical protein;protein_id=WP_002908189.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2179417 2180325 . + . ID=gene-LI478_RS10560;Name=LI478_RS10560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10560 NZ_CP085478.1 Protein Homology CDS 2179417 2180325 . + 0 ID=cds-WP_004180248.1;Parent=gene-LI478_RS10560;Dbxref=Genbank:WP_004180248.1;Name=WP_004180248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004180248.1;locus_tag=LI478_RS10560;product=DUF535 family protein;protein_id=WP_004180248.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2180408 2181625 . - . ID=gene-LI478_RS10565;Name=LI478_RS10565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10565 NZ_CP085478.1 Protein Homology CDS 2180408 2181625 . - 0 ID=cds-WP_004189586.1;Parent=gene-LI478_RS10565;Dbxref=Genbank:WP_004189586.1;Name=WP_004189586.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004202979.1;locus_tag=LI478_RS10565;product=MFS transporter;protein_id=WP_004189586.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2181803 2182264 . - . ID=gene-LI478_RS10570;Name=LI478_RS10570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10570 NZ_CP085478.1 Protein Homology CDS 2181803 2182264 . - 0 ID=cds-WP_004175770.1;Parent=gene-LI478_RS10570;Dbxref=Genbank:WP_004175770.1;Name=WP_004175770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009307678.1;locus_tag=LI478_RS10570;product=helix-turn-helix domain-containing protein;protein_id=WP_004175770.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2182325 2182573 . + . ID=gene-LI478_RS10575;Name=LI478_RS10575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10575 NZ_CP085478.1 Protein Homology CDS 2182325 2182573 . + 0 ID=cds-WP_048269175.1;Parent=gene-LI478_RS10575;Dbxref=Genbank:WP_048269175.1;Name=WP_048269175.1;Ontology_term=GO:0006725,GO:0016853;gbkey=CDS;go_function=isomerase activity|0016853||IEA;go_process=cellular aromatic compound metabolic process|0006725||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004175772.1;locus_tag=LI478_RS10575;product=tautomerase family protein;protein_id=WP_048269175.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2182760 2183953 . + . ID=gene-LI478_RS10580;Name=LI478_RS10580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10580 NZ_CP085478.1 Protein Homology CDS 2182760 2183953 . + 0 ID=cds-WP_225314218.1;Parent=gene-LI478_RS10580;Dbxref=Genbank:WP_225314218.1;Name=WP_225314218.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017899568.1;locus_tag=LI478_RS10580;product=MFS transporter;protein_id=WP_225314218.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2184076 2185041 . + . ID=gene-LI478_RS10585;Name=LI478_RS10585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10585 NZ_CP085478.1 Protein Homology CDS 2184076 2185041 . + 0 ID=cds-WP_074185307.1;Parent=gene-LI478_RS10585;Dbxref=Genbank:WP_074185307.1;Name=WP_074185307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004175776.1;locus_tag=LI478_RS10585;product=chromate resistance protein;protein_id=WP_074185307.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2185010 2186377 . + . ID=gene-LI478_RS10590;Name=chrA;gbkey=Gene;gene=chrA;gene_biotype=protein_coding;locus_tag=LI478_RS10590 NZ_CP085478.1 Protein Homology CDS 2185010 2186377 . + 0 ID=cds-WP_102007308.1;Parent=gene-LI478_RS10590;Dbxref=Genbank:WP_102007308.1;Name=WP_102007308.1;Ontology_term=GO:0015703,GO:0015109;gbkey=CDS;gene=chrA;go_function=chromate transmembrane transporter activity|0015109||IEA;go_process=chromate transport|0015703||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016161235.1;locus_tag=LI478_RS10590;product=chromate efflux transporter;protein_id=WP_102007308.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2186432 2187853 . - . ID=gene-LI478_RS10595;Name=LI478_RS10595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10595 NZ_CP085478.1 Protein Homology CDS 2186432 2187853 . - 0 ID=cds-WP_064153683.1;Parent=gene-LI478_RS10595;Dbxref=Genbank:WP_064153683.1;Name=WP_064153683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227325.1;locus_tag=LI478_RS10595;product=FAD-binding oxidoreductase;protein_id=WP_064153683.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2187880 2188695 . - . ID=gene-LI478_RS10600;Name=LI478_RS10600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10600 NZ_CP085478.1 Protein Homology CDS 2187880 2188695 . - 0 ID=cds-WP_002908134.1;Parent=gene-LI478_RS10600;Dbxref=Genbank:WP_002908134.1;Name=WP_002908134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227324.1;locus_tag=LI478_RS10600;product=ABC transporter permease;protein_id=WP_002908134.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2188697 2189527 . - . ID=gene-LI478_RS10605;Name=LI478_RS10605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10605 NZ_CP085478.1 Protein Homology CDS 2188697 2189527 . - 0 ID=cds-WP_004180245.1;Parent=gene-LI478_RS10605;Dbxref=Genbank:WP_004180245.1;Name=WP_004180245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227323.1;locus_tag=LI478_RS10605;product=ABC transporter ATP-binding protein;protein_id=WP_004180245.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2189524 2190507 . - . ID=gene-LI478_RS10610;Name=LI478_RS10610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10610 NZ_CP085478.1 Protein Homology CDS 2189524 2190507 . - 0 ID=cds-WP_002908130.1;Parent=gene-LI478_RS10610;Dbxref=Genbank:WP_002908130.1;Name=WP_002908130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227322.1;locus_tag=LI478_RS10610;product=ABC transporter substrate-binding protein;protein_id=WP_002908130.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2190507 2191388 . - . ID=gene-LI478_RS10615;Name=LI478_RS10615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10615 NZ_CP085478.1 Protein Homology CDS 2190507 2191388 . - 0 ID=cds-WP_064277273.1;Parent=gene-LI478_RS10615;Dbxref=Genbank:WP_064277273.1;Name=WP_064277273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227321.1;locus_tag=LI478_RS10615;product=creatininase family protein;protein_id=WP_064277273.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2191385 2191864 . - . ID=gene-LI478_RS10620;Name=LI478_RS10620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10620 NZ_CP085478.1 Protein Homology CDS 2191385 2191864 . - 0 ID=cds-WP_002908128.1;Parent=gene-LI478_RS10620;Dbxref=Genbank:WP_002908128.1;Name=WP_002908128.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227320.1;locus_tag=LI478_RS10620;product=RidA family protein;protein_id=WP_002908128.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2191854 2193137 . - . ID=gene-LI478_RS10625;Name=LI478_RS10625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10625 NZ_CP085478.1 Protein Homology CDS 2191854 2193137 . - 0 ID=cds-WP_064153681.1;Parent=gene-LI478_RS10625;Dbxref=Genbank:WP_064153681.1;Name=WP_064153681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227319.1;locus_tag=LI478_RS10625;product=hypothetical protein;protein_id=WP_064153681.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2193149 2194117 . - . ID=gene-LI478_RS10630;Name=LI478_RS10630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10630 NZ_CP085478.1 Protein Homology CDS 2193149 2194117 . - 0 ID=cds-WP_040226272.1;Parent=gene-LI478_RS10630;Dbxref=Genbank:WP_040226272.1;Name=WP_040226272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227318.1;locus_tag=LI478_RS10630;product=PDR/VanB family oxidoreductase;protein_id=WP_040226272.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2194325 2195224 . + . ID=gene-LI478_RS10635;Name=LI478_RS10635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10635 NZ_CP085478.1 Protein Homology CDS 2194325 2195224 . + 0 ID=cds-WP_002908057.1;Parent=gene-LI478_RS10635;Dbxref=Genbank:WP_002908057.1;Name=WP_002908057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227317.1;locus_tag=LI478_RS10635;product=LysR family transcriptional regulator;protein_id=WP_002908057.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2195519 2196508 . + . ID=gene-LI478_RS10640;Name=LI478_RS10640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10640 NZ_CP085478.1 Protein Homology CDS 2195519 2196508 . + 0 ID=cds-WP_064153680.1;Parent=gene-LI478_RS10640;Dbxref=Genbank:WP_064153680.1;Name=WP_064153680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227316.1;locus_tag=LI478_RS10640;product=ABC transporter substrate-binding protein;protein_id=WP_064153680.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2196520 2197938 . + . ID=gene-LI478_RS10645;Name=LI478_RS10645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10645 NZ_CP085478.1 Protein Homology CDS 2196520 2197938 . + 0 ID=cds-WP_064153679.1;Parent=gene-LI478_RS10645;Dbxref=Genbank:WP_064153679.1;Name=WP_064153679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227315.1;locus_tag=LI478_RS10645;product=amidohydrolase family protein;protein_id=WP_064153679.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2197959 2198948 . + . ID=gene-LI478_RS10650;Name=LI478_RS10650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10650 NZ_CP085478.1 Protein Homology CDS 2197959 2198948 . + 0 ID=cds-WP_074185306.1;Parent=gene-LI478_RS10650;Dbxref=Genbank:WP_074185306.1;Name=WP_074185306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227314.1;locus_tag=LI478_RS10650;product=isopenicillin N synthase family oxygenase;protein_id=WP_074185306.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2198964 2199746 . - . ID=gene-LI478_RS10655;Name=LI478_RS10655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10655 NZ_CP085478.1 Protein Homology CDS 2198964 2199746 . - 0 ID=cds-WP_004898673.1;Parent=gene-LI478_RS10655;Dbxref=Genbank:WP_004898673.1;Name=WP_004898673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004202947.1;locus_tag=LI478_RS10655;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_004898673.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2199839 2201176 . - . ID=gene-LI478_RS10660;Name=LI478_RS10660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10660 NZ_CP085478.1 Protein Homology CDS 2199839 2201176 . - 0 ID=cds-WP_008804577.1;Parent=gene-LI478_RS10660;Dbxref=Genbank:WP_008804577.1;Name=WP_008804577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004202945.1;locus_tag=LI478_RS10660;product=aspartate aminotransferase family protein;protein_id=WP_008804577.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2201166 2202221 . - . ID=gene-LI478_RS10665;Name=LI478_RS10665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10665 NZ_CP085478.1 Protein Homology CDS 2201166 2202221 . - 0 ID=cds-WP_223203120.1;Parent=gene-LI478_RS10665;Dbxref=Genbank:WP_223203120.1;Name=WP_223203120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016161224.1;locus_tag=LI478_RS10665;product=phosphotransferase;protein_id=WP_223203120.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2202647 2203420 . + . ID=gene-LI478_RS10670;Name=LI478_RS10670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10670 NZ_CP085478.1 Protein Homology CDS 2202647 2203420 . + 0 ID=cds-WP_024264438.1;Parent=gene-LI478_RS10670;Dbxref=Genbank:WP_024264438.1;Name=WP_024264438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004202943.1;locus_tag=LI478_RS10670;product=SDR family oxidoreductase;protein_id=WP_024264438.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2203435 2204961 . + . ID=gene-LI478_RS10675;Name=LI478_RS10675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10675 NZ_CP085478.1 Protein Homology CDS 2203435 2204961 . + 0 ID=cds-WP_064153677.1;Parent=gene-LI478_RS10675;Dbxref=Genbank:WP_064153677.1;Name=WP_064153677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004898666.1;locus_tag=LI478_RS10675;product=APC family permease;protein_id=WP_064153677.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2205023 2205940 . - . ID=gene-LI478_RS10680;Name=LI478_RS10680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10680 NZ_CP085478.1 Protein Homology CDS 2205023 2205940 . - 0 ID=cds-WP_064153676.1;Parent=gene-LI478_RS10680;Dbxref=Genbank:WP_064153676.1;Name=WP_064153676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012541489.1;locus_tag=LI478_RS10680;product=LysR family transcriptional regulator;protein_id=WP_064153676.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2206056 2207588 . + . ID=gene-LI478_RS10685;Name=LI478_RS10685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10685 NZ_CP085478.1 Protein Homology CDS 2206056 2207588 . + 0 ID=cds-WP_032415070.1;Parent=gene-LI478_RS10685;Dbxref=Genbank:WP_032415070.1;Name=WP_032415070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004151190.1;locus_tag=LI478_RS10685;product=MFS transporter;protein_id=WP_032415070.1;transl_table=11 NZ_CP085478.1 RefSeq pseudogene 2207602 2207697 . + . ID=gene-LI478_RS10690;Name=LI478_RS10690;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS10690;partial=true;pseudo=true;start_range=.,2207602 NZ_CP085478.1 Protein Homology CDS 2207602 2207697 . + 0 ID=cds-LI478_RS10690;Parent=gene-LI478_RS10690;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227307.1;locus_tag=LI478_RS10690;partial=true;product=transcriptional regulator;pseudo=true;start_range=.,2207602;transl_table=11 NZ_CP085478.1 RefSeq gene 2207734 2208222 . - . ID=gene-LI478_RS10695;Name=LI478_RS10695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10695 NZ_CP085478.1 Protein Homology CDS 2207734 2208222 . - 0 ID=cds-WP_004175817.1;Parent=gene-LI478_RS10695;Dbxref=Genbank:WP_004175817.1;Name=WP_004175817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227306.1;locus_tag=LI478_RS10695;product=DinB family protein;protein_id=WP_004175817.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2208340 2208867 . - . ID=gene-LI478_RS10700;Name=LI478_RS10700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10700 NZ_CP085478.1 Protein Homology CDS 2208340 2208867 . - 0 ID=cds-WP_002907918.1;Parent=gene-LI478_RS10700;Dbxref=Genbank:WP_002907918.1;Name=WP_002907918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227305.1;locus_tag=LI478_RS10700;product=anti-virulence regulator CigR family protein;protein_id=WP_002907918.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2209233 2210204 . - . ID=gene-LI478_RS10705;Name=LI478_RS10705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10705 NZ_CP085478.1 Protein Homology CDS 2209233 2210204 . - 0 ID=cds-WP_004151191.1;Parent=gene-LI478_RS10705;Dbxref=Genbank:WP_004151191.1;Name=WP_004151191.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227304.1;locus_tag=LI478_RS10705;product=ATP-binding cassette domain-containing protein;protein_id=WP_004151191.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2210201 2211181 . - . ID=gene-LI478_RS10710;Name=LI478_RS10710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10710 NZ_CP085478.1 Protein Homology CDS 2210201 2211181 . - 0 ID=cds-WP_032415069.1;Parent=gene-LI478_RS10710;Dbxref=Genbank:WP_032415069.1;Name=WP_032415069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227303.1;locus_tag=LI478_RS10710;product=ABC transporter ATP-binding protein;protein_id=WP_032415069.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2211178 2212128 . - . ID=gene-LI478_RS10715;Name=LI478_RS10715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10715 NZ_CP085478.1 Protein Homology CDS 2211178 2212128 . - 0 ID=cds-WP_016197619.1;Parent=gene-LI478_RS10715;Dbxref=Genbank:WP_016197619.1;Name=WP_016197619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227302.1;locus_tag=LI478_RS10715;product=ABC transporter permease;protein_id=WP_016197619.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2212125 2213084 . - . ID=gene-LI478_RS10720;Name=LI478_RS10720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10720 NZ_CP085478.1 Protein Homology CDS 2212125 2213084 . - 0 ID=cds-WP_004175825.1;Parent=gene-LI478_RS10720;Dbxref=Genbank:WP_004175825.1;Name=WP_004175825.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227301.1;locus_tag=LI478_RS10720;product=ABC transporter permease;protein_id=WP_004175825.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2213128 2214831 . - . ID=gene-LI478_RS10725;Name=LI478_RS10725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10725 NZ_CP085478.1 Protein Homology CDS 2213128 2214831 . - 0 ID=cds-WP_064153674.1;Parent=gene-LI478_RS10725;Dbxref=Genbank:WP_064153674.1;Name=WP_064153674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227300.1;locus_tag=LI478_RS10725;product=ABC transporter substrate-binding protein;protein_id=WP_064153674.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2215176 2215859 . - . ID=gene-LI478_RS10730;Name=LI478_RS10730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10730 NZ_CP085478.1 Protein Homology CDS 2215176 2215859 . - 0 ID=cds-WP_004175829.1;Parent=gene-LI478_RS10730;Dbxref=Genbank:WP_004175829.1;Name=WP_004175829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227299.1;locus_tag=LI478_RS10730;product=CatA-like O-acetyltransferase%2C family 1;protein_id=WP_004175829.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2215891 2216274 . - . ID=gene-LI478_RS10735;Name=LI478_RS10735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10735 NZ_CP085478.1 Protein Homology CDS 2215891 2216274 . - 0 ID=cds-WP_023278937.1;Parent=gene-LI478_RS10735;Dbxref=Genbank:WP_023278937.1;Name=WP_023278937.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227298.1;locus_tag=LI478_RS10735;product=VOC family protein;protein_id=WP_023278937.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2216366 2217136 . + . ID=gene-LI478_RS10740;Name=LI478_RS10740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10740 NZ_CP085478.1 Protein Homology CDS 2216366 2217136 . + 0 ID=cds-WP_004184291.1;Parent=gene-LI478_RS10740;Dbxref=Genbank:WP_004184291.1;Name=WP_004184291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227297.1;locus_tag=LI478_RS10740;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_004184291.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2217141 2217770 . - . ID=gene-LI478_RS10745;Name=LI478_RS10745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10745 NZ_CP085478.1 Protein Homology CDS 2217141 2217770 . - 0 ID=cds-WP_002907812.1;Parent=gene-LI478_RS10745;Dbxref=Genbank:WP_002907812.1;Name=WP_002907812.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227296.1;locus_tag=LI478_RS10745;product=LysE family transporter;protein_id=WP_002907812.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2218020 2218655 . + . ID=gene-LI478_RS10750;Name=LI478_RS10750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10750 NZ_CP085478.1 Protein Homology CDS 2218020 2218655 . + 0 ID=cds-WP_002907811.1;Parent=gene-LI478_RS10750;Dbxref=Genbank:WP_002907811.1;Name=WP_002907811.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227295.1;locus_tag=LI478_RS10750;product=carbonic anhydrase;protein_id=WP_002907811.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2218968 2219177 . - . ID=gene-LI478_RS10755;Name=LI478_RS10755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10755 NZ_CP085478.1 Protein Homology CDS 2218968 2219177 . - 0 ID=cds-WP_002907807.1;Parent=gene-LI478_RS10755;Dbxref=Genbank:WP_002907807.1;Name=WP_002907807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227293.1;locus_tag=LI478_RS10755;product=DUF1471 domain-containing protein;protein_id=WP_002907807.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2219262 2219978 . - . ID=gene-LI478_RS10760;Name=LI478_RS10760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10760 NZ_CP085478.1 Protein Homology CDS 2219262 2219978 . - 0 ID=cds-WP_019705748.1;Parent=gene-LI478_RS10760;Dbxref=Genbank:WP_019705748.1;Name=WP_019705748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227292.1;locus_tag=LI478_RS10760;product=hypothetical protein;protein_id=WP_019705748.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2220024 2220458 . - . ID=gene-LI478_RS10765;Name=LI478_RS10765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10765 NZ_CP085478.1 Protein Homology CDS 2220024 2220458 . - 0 ID=cds-WP_004143863.1;Parent=gene-LI478_RS10765;Dbxref=Genbank:WP_004143863.1;Name=WP_004143863.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227291.1;locus_tag=LI478_RS10765;product=winged helix-turn-helix domain-containing protein;protein_id=WP_004143863.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2220860 2221009 . + . ID=gene-LI478_RS10770;Name=LI478_RS10770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10770 NZ_CP085478.1 Protein Homology CDS 2220860 2221009 . + 0 ID=cds-WP_002907802.1;Parent=gene-LI478_RS10770;Dbxref=Genbank:WP_002907802.1;Name=WP_002907802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227290.1;locus_tag=LI478_RS10770;product=hypothetical protein;protein_id=WP_002907802.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2221097 2221933 . - . ID=gene-LI478_RS10775;Name=LI478_RS10775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10775 NZ_CP085478.1 Protein Homology CDS 2221097 2221933 . - 0 ID=cds-WP_029884586.1;Parent=gene-LI478_RS10775;Dbxref=Genbank:WP_029884586.1;Name=WP_029884586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227289.1;locus_tag=LI478_RS10775;product=MBL fold metallo-hydrolase;protein_id=WP_029884586.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2221941 2222456 . - . ID=gene-LI478_RS10780;Name=LI478_RS10780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10780 NZ_CP085478.1 Protein Homology CDS 2221941 2222456 . - 0 ID=cds-WP_032415066.1;Parent=gene-LI478_RS10780;Dbxref=Genbank:WP_032415066.1;Name=WP_032415066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227288.1;locus_tag=LI478_RS10780;product=hypothetical protein;protein_id=WP_032415066.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2222613 2223497 . + . ID=gene-LI478_RS10785;Name=LI478_RS10785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10785 NZ_CP085478.1 Protein Homology CDS 2222613 2223497 . + 0 ID=cds-WP_002907799.1;Parent=gene-LI478_RS10785;Dbxref=Genbank:WP_002907799.1;Name=WP_002907799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227287.1;locus_tag=LI478_RS10785;product=LysR substrate-binding domain-containing protein;protein_id=WP_002907799.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2223494 2224420 . - . ID=gene-LI478_RS10790;Name=LI478_RS10790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10790 NZ_CP085478.1 Protein Homology CDS 2223494 2224420 . - 0 ID=cds-WP_032415064.1;Parent=gene-LI478_RS10790;Dbxref=Genbank:WP_032415064.1;Name=WP_032415064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009486407.1;locus_tag=LI478_RS10790;product=AraC family transcriptional regulator;protein_id=WP_032415064.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2224519 2225271 . + . ID=gene-LI478_RS10795;Name=LI478_RS10795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10795 NZ_CP085478.1 Protein Homology CDS 2224519 2225271 . + 0 ID=cds-WP_048331902.1;Parent=gene-LI478_RS10795;Dbxref=Genbank:WP_048331902.1;Name=WP_048331902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008804607.1;locus_tag=LI478_RS10795;product=SDR family oxidoreductase;protein_id=WP_048331902.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2226098 2228455 . + . ID=gene-LI478_RS10800;Name=vgrG;gbkey=Gene;gene=vgrG;gene_biotype=protein_coding;locus_tag=LI478_RS10800 NZ_CP085478.1 Protein Homology CDS 2226098 2228455 . + 0 ID=cds-WP_048331901.1;Parent=gene-LI478_RS10800;Dbxref=Genbank:WP_048331901.1;Name=WP_048331901.1;gbkey=CDS;gene=vgrG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001562062.1;locus_tag=LI478_RS10800;product=type VI secretion system Vgr family protein;protein_id=WP_048331901.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2228471 2231554 . + . ID=gene-LI478_RS10805;Name=LI478_RS10805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10805 NZ_CP085478.1 Protein Homology CDS 2228471 2231554 . + 0 ID=cds-WP_083565243.1;Parent=gene-LI478_RS10805;Dbxref=Genbank:WP_083565243.1;Name=WP_083565243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000125550.1;locus_tag=LI478_RS10805;product=peptidoglycan DD-metalloendopeptidase family protein;protein_id=WP_083565243.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2231581 2232417 . + . ID=gene-LI478_RS10810;Name=LI478_RS10810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10810 NZ_CP085478.1 GeneMarkS-2+ CDS 2231581 2232417 . + 0 ID=cds-WP_064153741.1;Parent=gene-LI478_RS10810;Dbxref=Genbank:WP_064153741.1;Name=WP_064153741.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LI478_RS10810;product=hypothetical protein;protein_id=WP_064153741.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2232518 2232907 . + . ID=gene-LI478_RS10815;Name=LI478_RS10815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10815 NZ_CP085478.1 GeneMarkS-2+ CDS 2232518 2232907 . + 0 ID=cds-WP_050582450.1;Parent=gene-LI478_RS10815;Dbxref=Genbank:WP_050582450.1;Name=WP_050582450.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LI478_RS10815;product=hypothetical protein;protein_id=WP_050582450.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2232894 2233331 . + . ID=gene-LI478_RS10820;Name=LI478_RS10820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10820 NZ_CP085478.1 GeneMarkS-2+ CDS 2232894 2233331 . + 0 ID=cds-WP_227394180.1;Parent=gene-LI478_RS10820;Dbxref=Genbank:WP_227394180.1;Name=WP_227394180.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LI478_RS10820;product=hypothetical protein;protein_id=WP_227394180.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2233363 2233653 . + . ID=gene-LI478_RS10825;Name=LI478_RS10825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10825 NZ_CP085478.1 GeneMarkS-2+ CDS 2233363 2233653 . + 0 ID=cds-WP_225314229.1;Parent=gene-LI478_RS10825;Dbxref=Genbank:WP_225314229.1;Name=WP_225314229.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LI478_RS10825;product=hypothetical protein;protein_id=WP_225314229.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2233890 2235263 . + . ID=gene-LI478_RS10830;Name=LI478_RS10830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10830 NZ_CP085478.1 GeneMarkS-2+ CDS 2233890 2235263 . + 0 ID=cds-WP_225207907.1;Parent=gene-LI478_RS10830;Dbxref=Genbank:WP_225207907.1;Name=WP_225207907.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LI478_RS10830;product=hypothetical protein;protein_id=WP_225207907.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2235250 2236107 . + . ID=gene-LI478_RS10835;Name=LI478_RS10835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10835 NZ_CP085478.1 GeneMarkS-2+ CDS 2235250 2236107 . + 0 ID=cds-WP_125336888.1;Parent=gene-LI478_RS10835;Dbxref=Genbank:WP_125336888.1;Name=WP_125336888.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LI478_RS10835;product=hypothetical protein;protein_id=WP_125336888.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2236296 2238128 . + . ID=gene-LI478_RS10840;Name=LI478_RS10840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10840 NZ_CP085478.1 Protein Homology CDS 2236296 2238128 . + 0 ID=cds-WP_227394181.1;Parent=gene-LI478_RS10840;Dbxref=Genbank:WP_227394181.1;Name=WP_227394181.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017638.2;locus_tag=LI478_RS10840;product=hypothetical protein;protein_id=WP_227394181.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2238230 2239051 . + . ID=gene-LI478_RS10845;Name=LI478_RS10845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10845 NZ_CP085478.1 GeneMarkS-2+ CDS 2238230 2239051 . + 0 ID=cds-WP_064153420.1;Parent=gene-LI478_RS10845;Dbxref=Genbank:WP_064153420.1;Name=WP_064153420.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LI478_RS10845;product=hypothetical protein;protein_id=WP_064153420.1;transl_table=11 NZ_CP085478.1 RefSeq pseudogene 2239292 2240454 . + . ID=gene-LI478_RS10850;Name=LI478_RS10850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS10850;pseudo=true NZ_CP085478.1 Protein Homology CDS 2239292 2240454 . + 0 ID=cds-LI478_RS10850;Parent=gene-LI478_RS10850;Note=programmed frameshift%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=LI478_RS10850;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP085478.1 RefSeq gene 2240486 2240803 . + . ID=gene-LI478_RS10855;Name=LI478_RS10855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10855 NZ_CP085478.1 Protein Homology CDS 2240486 2240803 . + 0 ID=cds-WP_155105648.1;Parent=gene-LI478_RS10855;Dbxref=Genbank:WP_155105648.1;Name=WP_155105648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004148612.1;locus_tag=LI478_RS10855;product=hypothetical protein;protein_id=WP_155105648.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2240800 2241027 . + . ID=gene-LI478_RS10860;Name=LI478_RS10860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10860 NZ_CP085478.1 Protein Homology CDS 2240800 2241027 . + 0 ID=cds-WP_077250274.1;Parent=gene-LI478_RS10860;Dbxref=Genbank:WP_077250274.1;Name=WP_077250274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015874864.1;locus_tag=LI478_RS10860;product=hypothetical protein;protein_id=WP_077250274.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2241214 2241290 . - . ID=gene-LI478_RS10865;Name=LI478_RS10865;gbkey=Gene;gene_biotype=tRNA;locus_tag=LI478_RS10865 NZ_CP085478.1 tRNAscan-SE tRNA 2241214 2241290 . - . ID=rna-LI478_RS10865;Parent=gene-LI478_RS10865;anticodon=(pos:complement(2241254..2241256));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS10865;product=tRNA-Val NZ_CP085478.1 tRNAscan-SE exon 2241214 2241290 . - . ID=exon-LI478_RS10865-1;Parent=rna-LI478_RS10865;anticodon=(pos:complement(2241254..2241256));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS10865;product=tRNA-Val NZ_CP085478.1 RefSeq gene 2241295 2241371 . - . ID=gene-LI478_RS10870;Name=LI478_RS10870;gbkey=Gene;gene_biotype=tRNA;locus_tag=LI478_RS10870 NZ_CP085478.1 tRNAscan-SE tRNA 2241295 2241371 . - . ID=rna-LI478_RS10870;Parent=gene-LI478_RS10870;anticodon=(pos:complement(2241335..2241337));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS10870;product=tRNA-Val NZ_CP085478.1 tRNAscan-SE exon 2241295 2241371 . - . ID=exon-LI478_RS10870-1;Parent=rna-LI478_RS10870;anticodon=(pos:complement(2241335..2241337));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS10870;product=tRNA-Val NZ_CP085478.1 RefSeq gene 2241376 2241452 . - . ID=gene-LI478_RS10875;Name=LI478_RS10875;gbkey=Gene;gene_biotype=tRNA;locus_tag=LI478_RS10875 NZ_CP085478.1 tRNAscan-SE tRNA 2241376 2241452 . - . ID=rna-LI478_RS10875;Parent=gene-LI478_RS10875;anticodon=(pos:complement(2241416..2241418));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS10875;product=tRNA-Val NZ_CP085478.1 tRNAscan-SE exon 2241376 2241452 . - . ID=exon-LI478_RS10875-1;Parent=rna-LI478_RS10875;anticodon=(pos:complement(2241416..2241418));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS10875;product=tRNA-Val NZ_CP085478.1 RefSeq gene 2241707 2242285 . + . ID=gene-LI478_RS10880;Name=LI478_RS10880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10880 NZ_CP085478.1 Protein Homology CDS 2241707 2242285 . + 0 ID=cds-WP_004175848.1;Parent=gene-LI478_RS10880;Dbxref=Genbank:WP_004175848.1;Name=WP_004175848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227284.1;locus_tag=LI478_RS10880;product=TIGR00730 family Rossman fold protein;protein_id=WP_004175848.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2242426 2242833 . - . ID=gene-LI478_RS10885;Name=asr;gbkey=Gene;gene=asr;gene_biotype=protein_coding;locus_tag=LI478_RS10885 NZ_CP085478.1 Protein Homology CDS 2242426 2242833 . - 0 ID=cds-WP_040024451.1;Parent=gene-LI478_RS10885;Dbxref=Genbank:WP_040024451.1;Name=WP_040024451.1;gbkey=CDS;gene=asr;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227283.1;locus_tag=LI478_RS10885;product=acid resistance repetitive basic protein Asr;protein_id=WP_040024451.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2243009 2244382 . - . ID=gene-LI478_RS10890;Name=mdtK;gbkey=Gene;gene=mdtK;gene_biotype=protein_coding;locus_tag=LI478_RS10890 NZ_CP085478.1 Protein Homology CDS 2243009 2244382 . - 0 ID=cds-WP_016946504.1;Parent=gene-LI478_RS10890;Dbxref=Genbank:WP_016946504.1;Name=WP_016946504.1;gbkey=CDS;gene=mdtK;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227282.1;locus_tag=LI478_RS10890;product=MdtK family multidrug efflux MATE transporter;protein_id=WP_016946504.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2244612 2245247 . + . ID=gene-LI478_RS10895;Name=LI478_RS10895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10895 NZ_CP085478.1 Protein Homology CDS 2244612 2245247 . + 0 ID=cds-WP_002907792.1;Parent=gene-LI478_RS10895;Dbxref=Genbank:WP_002907792.1;Name=WP_002907792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227281.1;locus_tag=LI478_RS10895;product=riboflavin synthase;protein_id=WP_002907792.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2245284 2246432 . - . ID=gene-LI478_RS10900;Name=cfa;gbkey=Gene;gene=cfa;gene_biotype=protein_coding;locus_tag=LI478_RS10900 NZ_CP085478.1 Protein Homology CDS 2245284 2246432 . - 0 ID=cds-WP_002907788.1;Parent=gene-LI478_RS10900;Dbxref=Genbank:WP_002907788.1;Name=WP_002907788.1;gbkey=CDS;gene=cfa;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227280.1;locus_tag=LI478_RS10900;product=cyclopropane fatty acyl phospholipid synthase;protein_id=WP_002907788.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2246725 2247906 . - . ID=gene-LI478_RS10905;Name=punC;gbkey=Gene;gene=punC;gene_biotype=protein_coding;locus_tag=LI478_RS10905 NZ_CP085478.1 Protein Homology CDS 2246725 2247906 . - 0 ID=cds-WP_002907785.1;Parent=gene-LI478_RS10905;Dbxref=Genbank:WP_002907785.1;Name=WP_002907785.1;Ontology_term=GO:1990961,GO:0042910,GO:0016020;gbkey=CDS;gene=punC;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227279.1;locus_tag=LI478_RS10905;product=purine nucleoside transporter PunC;protein_id=WP_002907785.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2248019 2249023 . + . ID=gene-LI478_RS10910;Name=punR;gbkey=Gene;gene=punR;gene_biotype=protein_coding;locus_tag=LI478_RS10910 NZ_CP085478.1 Protein Homology CDS 2248019 2249023 . + 0 ID=cds-WP_023316933.1;Parent=gene-LI478_RS10910;Dbxref=Genbank:WP_023316933.1;Name=WP_023316933.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=punR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004143848.1;locus_tag=LI478_RS10910;product=DNA-binding transcriptional activator PunR;protein_id=WP_023316933.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2248950 2249975 . - . ID=gene-LI478_RS10915;Name=purR;gbkey=Gene;gene=purR;gene_biotype=protein_coding;locus_tag=LI478_RS10915 NZ_CP085478.1 Protein Homology CDS 2248950 2249975 . - 0 ID=cds-WP_002907778.1;Parent=gene-LI478_RS10915;Dbxref=Genbank:WP_002907778.1;Name=WP_002907778.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=purR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127190.1;locus_tag=LI478_RS10915;product=HTH-type transcriptional repressor PurR;protein_id=WP_002907778.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2250268 2250360 . + . ID=gene-LI478_RS10920;Name=LI478_RS10920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10920 NZ_CP085478.1 Protein Homology CDS 2250268 2250360 . + 0 ID=cds-WP_002907776.1;Parent=gene-LI478_RS10920;Dbxref=Genbank:WP_002907776.1;Name=WP_002907776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001391644.1;locus_tag=LI478_RS10920;product=YnhF family membrane protein;protein_id=WP_002907776.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2250527 2251693 . + . ID=gene-LI478_RS10925;Name=LI478_RS10925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10925 NZ_CP085478.1 Protein Homology CDS 2250527 2251693 . + 0 ID=cds-WP_002907773.1;Parent=gene-LI478_RS10925;Dbxref=Genbank:WP_002907773.1;Name=WP_002907773.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227277.1;locus_tag=LI478_RS10925;product=MFS transporter;protein_id=WP_002907773.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2251755 2252336 . - . ID=gene-LI478_RS10930;Name=sodB;gbkey=Gene;gene=sodB;gene_biotype=protein_coding;locus_tag=LI478_RS10930 NZ_CP085478.1 Protein Homology CDS 2251755 2252336 . - 0 ID=cds-WP_064153417.1;Parent=gene-LI478_RS10930;Dbxref=Genbank:WP_064153417.1;Name=WP_064153417.1;Ontology_term=GO:0006801,GO:0004784,GO:0046872;gbkey=CDS;gene=sodB;go_function=superoxide dismutase activity|0004784||IEA,metal ion binding|0046872||IEA;go_process=superoxide metabolic process|0006801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020079002.1;locus_tag=LI478_RS10930;product=superoxide dismutase [Fe];protein_id=WP_064153417.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2252806 2253291 . + . ID=gene-LI478_RS10935;Name=LI478_RS10935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10935 NZ_CP085478.1 Protein Homology CDS 2252806 2253291 . + 0 ID=cds-WP_004175852.1;Parent=gene-LI478_RS10935;Dbxref=Genbank:WP_004175852.1;Name=WP_004175852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227275.1;locus_tag=LI478_RS10935;product=AraC family transcriptional regulator;protein_id=WP_004175852.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2253246 2254118 . - . ID=gene-LI478_RS10940;Name=LI478_RS10940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10940 NZ_CP085478.1 Protein Homology CDS 2253246 2254118 . - 0 ID=cds-WP_064153415.1;Parent=gene-LI478_RS10940;Dbxref=Genbank:WP_064153415.1;Name=WP_064153415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012541517.1;locus_tag=LI478_RS10940;product=C40 family peptidase;protein_id=WP_064153415.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2254459 2254806 . + . ID=gene-LI478_RS10945;Name=LI478_RS10945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10945 NZ_CP085478.1 Protein Homology CDS 2254459 2254806 . + 0 ID=cds-WP_002907768.1;Parent=gene-LI478_RS10945;Dbxref=Genbank:WP_002907768.1;Name=WP_002907768.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227273.1;locus_tag=LI478_RS10945;product=Grx4 family monothiol glutaredoxin;protein_id=WP_002907768.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2254854 2255501 . - . ID=gene-LI478_RS10950;Name=rnt;gbkey=Gene;gene=rnt;gene_biotype=protein_coding;locus_tag=LI478_RS10950 NZ_CP085478.1 Protein Homology CDS 2254854 2255501 . - 0 ID=cds-WP_002907766.1;Parent=gene-LI478_RS10950;Dbxref=Genbank:WP_002907766.1;Name=WP_002907766.1;Ontology_term=GO:0006364,GO:0042780,GO:0016896;gbkey=CDS;gene=rnt;go_function=exoribonuclease activity%2C producing 5'-phosphomonoesters|0016896||IEA;go_process=rRNA processing|0006364||IEA,tRNA 3'-end processing|0042780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227272.1;locus_tag=LI478_RS10950;product=ribonuclease T;protein_id=WP_002907766.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2255639 2256046 . - . ID=gene-LI478_RS10955;Name=gloA;gbkey=Gene;gene=gloA;gene_biotype=protein_coding;locus_tag=LI478_RS10955 NZ_CP085478.1 Protein Homology CDS 2255639 2256046 . - 0 ID=cds-WP_002907764.1;Parent=gene-LI478_RS10955;Dbxref=Genbank:WP_002907764.1;Name=WP_002907764.1;gbkey=CDS;gene=gloA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500591.1;locus_tag=LI478_RS10955;product=lactoylglutathione lyase;protein_id=WP_002907764.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2256125 2257222 . - . ID=gene-LI478_RS10960;Name=LI478_RS10960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10960 NZ_CP085478.1 Protein Homology CDS 2256125 2257222 . - 0 ID=cds-WP_002907763.1;Parent=gene-LI478_RS10960;Dbxref=Genbank:WP_002907763.1;Name=WP_002907763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227270.1;locus_tag=LI478_RS10960;product=alkene reductase;protein_id=WP_002907763.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2257276 2257875 . - . ID=gene-LI478_RS10965;Name=LI478_RS10965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10965 NZ_CP085478.1 Protein Homology CDS 2257276 2257875 . - 0 ID=cds-WP_004175857.1;Parent=gene-LI478_RS10965;Dbxref=Genbank:WP_004175857.1;Name=WP_004175857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227269.1;locus_tag=LI478_RS10965;product=TetR/AcrR family transcriptional regulator;protein_id=WP_004175857.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2258015 2258257 . + . ID=gene-LI478_RS10970;Name=LI478_RS10970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10970 NZ_CP085478.1 Protein Homology CDS 2258015 2258257 . + 0 ID=cds-WP_004189722.1;Parent=gene-LI478_RS10970;Dbxref=Genbank:WP_004189722.1;Name=WP_004189722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227268.1;locus_tag=LI478_RS10970;product=DUF1289 domain-containing protein;protein_id=WP_004189722.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2258306 2259202 . + . ID=gene-LI478_RS10975;Name=LI478_RS10975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10975 NZ_CP085478.1 Protein Homology CDS 2258306 2259202 . + 0 ID=cds-WP_002907760.1;Parent=gene-LI478_RS10975;Dbxref=Genbank:WP_002907760.1;Name=WP_002907760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227267.1;locus_tag=LI478_RS10975;product=aldo/keto reductase family oxidoreductase;protein_id=WP_002907760.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2259272 2259793 . + . ID=gene-LI478_RS10980;Name=sodC;gbkey=Gene;gene=sodC;gene_biotype=protein_coding;locus_tag=LI478_RS10980 NZ_CP085478.1 Protein Homology CDS 2259272 2259793 . + 0 ID=cds-WP_004184268.1;Parent=gene-LI478_RS10980;Dbxref=Genbank:WP_004184268.1;Name=WP_004184268.1;Ontology_term=GO:0004784;gbkey=CDS;gene=sodC;go_function=superoxide dismutase activity|0004784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017901092.1;locus_tag=LI478_RS10980;product=superoxide dismutase [Cu-Zn] SodC;protein_id=WP_004184268.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2259786 2261810 . - . ID=gene-LI478_RS10985;Name=LI478_RS10985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10985 NZ_CP085478.1 Protein Homology CDS 2259786 2261810 . - 0 ID=cds-WP_064153413.1;Parent=gene-LI478_RS10985;Dbxref=Genbank:WP_064153413.1;Name=WP_064153413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004200123.1;locus_tag=LI478_RS10985;product=FUSC family protein;protein_id=WP_064153413.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2261810 2262706 . - . ID=gene-LI478_RS10990;Name=LI478_RS10990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10990 NZ_CP085478.1 Protein Homology CDS 2261810 2262706 . - 0 ID=cds-WP_004143835.1;Parent=gene-LI478_RS10990;Dbxref=Genbank:WP_004143835.1;Name=WP_004143835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227263.1;locus_tag=LI478_RS10990;product=HlyD family secretion protein;protein_id=WP_004143835.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2262717 2262953 . - . ID=gene-LI478_RS10995;Name=LI478_RS10995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS10995 NZ_CP085478.1 Protein Homology CDS 2262717 2262953 . - 0 ID=cds-WP_004143834.1;Parent=gene-LI478_RS10995;Dbxref=Genbank:WP_004143834.1;Name=WP_004143834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227262.1;locus_tag=LI478_RS10995;product=DUF1656 domain-containing protein;protein_id=WP_004143834.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2263126 2263566 . + . ID=gene-LI478_RS11000;Name=slyA;gbkey=Gene;gene=slyA;gene_biotype=protein_coding;locus_tag=LI478_RS11000 NZ_CP085478.1 Protein Homology CDS 2263126 2263566 . + 0 ID=cds-WP_004143833.1;Parent=gene-LI478_RS11000;Dbxref=Genbank:WP_004143833.1;Name=WP_004143833.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=slyA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460407.3;locus_tag=LI478_RS11000;product=transcriptional regulator SlyA;protein_id=WP_004143833.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2263600 2264961 . - . ID=gene-LI478_RS11005;Name=LI478_RS11005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11005 NZ_CP085478.1 Protein Homology CDS 2263600 2264961 . - 0 ID=cds-WP_064153411.1;Parent=gene-LI478_RS11005;Dbxref=Genbank:WP_064153411.1;Name=WP_064153411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227259.1;locus_tag=LI478_RS11005;product=GGDEF domain-containing protein;protein_id=WP_064153411.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2265184 2265651 . - . ID=gene-LI478_RS11010;Name=slyB;gbkey=Gene;gene=slyB;gene_biotype=protein_coding;locus_tag=LI478_RS11010 NZ_CP085478.1 Protein Homology CDS 2265184 2265651 . - 0 ID=cds-WP_002907749.1;Parent=gene-LI478_RS11010;Dbxref=Genbank:WP_002907749.1;Name=WP_002907749.1;gbkey=CDS;gene=slyB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227258.1;locus_tag=LI478_RS11010;product=outer membrane lipoprotein SlyB;protein_id=WP_002907749.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2265918 2267042 . + . ID=gene-LI478_RS11015;Name=anmK;gbkey=Gene;gene=anmK;gene_biotype=protein_coding;locus_tag=LI478_RS11015 NZ_CP085478.1 Protein Homology CDS 2265918 2267042 . + 0 ID=cds-WP_004143831.1;Parent=gene-LI478_RS11015;Dbxref=Genbank:WP_004143831.1;Name=WP_004143831.1;gbkey=CDS;gene=anmK;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227257.1;locus_tag=LI478_RS11015;product=anhydro-N-acetylmuramic acid kinase;protein_id=WP_004143831.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2267135 2267458 . + . ID=gene-LI478_RS11020;Name=mliC;gbkey=Gene;gene=mliC;gene_biotype=protein_coding;locus_tag=LI478_RS11020 NZ_CP085478.1 Protein Homology CDS 2267135 2267458 . + 0 ID=cds-WP_002907744.1;Parent=gene-LI478_RS11020;Dbxref=Genbank:WP_002907744.1;Name=WP_002907744.1;gbkey=CDS;gene=mliC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004136809.1;locus_tag=LI478_RS11020;product=C-type lysozyme inhibitor;protein_id=WP_002907744.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2267516 2268172 . + . ID=gene-LI478_RS11025;Name=pdxH;gbkey=Gene;gene=pdxH;gene_biotype=protein_coding;locus_tag=LI478_RS11025 NZ_CP085478.1 Protein Homology CDS 2267516 2268172 . + 0 ID=cds-WP_002907742.1;Parent=gene-LI478_RS11025;Dbxref=Genbank:WP_002907742.1;Name=WP_002907742.1;Ontology_term=GO:0008615,GO:0004733,GO:0010181;gbkey=CDS;gene=pdxH;go_function=pyridoxamine-phosphate oxidase activity|0004733||IEA,FMN binding|0010181||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127173.1;locus_tag=LI478_RS11025;product=pyridoxamine 5'-phosphate oxidase;protein_id=WP_002907742.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2268297 2269571 . + . ID=gene-LI478_RS11030;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=LI478_RS11030 NZ_CP085478.1 Protein Homology CDS 2268297 2269571 . + 0 ID=cds-WP_002907740.1;Parent=gene-LI478_RS11030;Dbxref=Genbank:WP_002907740.1;Name=WP_002907740.1;Ontology_term=GO:0006437,GO:0004831,GO:0005737;gbkey=CDS;gene=tyrS;go_component=cytoplasm|0005737||IEA;go_function=tyrosine-tRNA ligase activity|0004831||IEA;go_process=tyrosyl-tRNA aminoacylation|0006437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460412.1;locus_tag=LI478_RS11030;product=tyrosine--tRNA ligase;protein_id=WP_002907740.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2269633 2270493 . + . ID=gene-LI478_RS11035;Name=pdxY;gbkey=Gene;gene=pdxY;gene_biotype=protein_coding;locus_tag=LI478_RS11035 NZ_CP085478.1 Protein Homology CDS 2269633 2270493 . + 0 ID=cds-WP_002907739.1;Parent=gene-LI478_RS11035;Dbxref=Genbank:WP_002907739.1;Name=WP_002907739.1;Ontology_term=GO:0009443,GO:0008478;gbkey=CDS;gene=pdxY;go_function=pyridoxal kinase activity|0008478||IEA;go_process=pyridoxal 5'-phosphate salvage|0009443||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227253.1;locus_tag=LI478_RS11035;product=pyridoxal kinase PdxY;protein_id=WP_002907739.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2270536 2271141 . - . ID=gene-LI478_RS11040;Name=gstA;gbkey=Gene;gene=gstA;gene_biotype=protein_coding;locus_tag=LI478_RS11040 NZ_CP085478.1 Protein Homology CDS 2270536 2271141 . - 0 ID=cds-WP_004175870.1;Parent=gene-LI478_RS11040;Dbxref=Genbank:WP_004175870.1;Name=WP_004175870.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=gstA;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227252.1;locus_tag=LI478_RS11040;product=glutathione transferase GstA;protein_id=WP_004175870.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2271252 2272757 . - . ID=gene-LI478_RS11045;Name=dtpA;gbkey=Gene;gene=dtpA;gene_biotype=protein_coding;locus_tag=LI478_RS11045 NZ_CP085478.1 Protein Homology CDS 2271252 2272757 . - 0 ID=cds-WP_004151206.1;Parent=gene-LI478_RS11045;Dbxref=Genbank:WP_004151206.1;Name=WP_004151206.1;Ontology_term=GO:0015833,GO:0055085,GO:1904680,GO:0016020;gbkey=CDS;gene=dtpA;go_component=membrane|0016020||IEA;go_function=peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227251.1;locus_tag=LI478_RS11045;product=dipeptide/tripeptide permease DtpA;protein_id=WP_004151206.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2273365 2274000 . - . ID=gene-LI478_RS11050;Name=nth;gbkey=Gene;gene=nth;gene_biotype=protein_coding;locus_tag=LI478_RS11050 NZ_CP085478.1 Protein Homology CDS 2273365 2274000 . - 0 ID=cds-WP_002907734.1;Parent=gene-LI478_RS11050;Dbxref=Genbank:WP_002907734.1;Name=WP_002907734.1;Ontology_term=GO:0006284,GO:0003906;gbkey=CDS;gene=nth;go_function=DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227249.1;locus_tag=LI478_RS11050;product=endonuclease III;protein_id=WP_002907734.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2274002 2274700 . - . ID=gene-LI478_RS11055;Name=LI478_RS11055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11055 NZ_CP085478.1 Protein Homology CDS 2274002 2274700 . - 0 ID=cds-WP_002907733.1;Parent=gene-LI478_RS11055;Dbxref=Genbank:WP_002907733.1;Name=WP_002907733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227248.1;locus_tag=LI478_RS11055;product=electron transport complex subunit E;protein_id=WP_002907733.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2274703 2275323 . - . ID=gene-LI478_RS11060;Name=rsxG;gbkey=Gene;gene=rsxG;gene_biotype=protein_coding;locus_tag=LI478_RS11060 NZ_CP085478.1 Protein Homology CDS 2274703 2275323 . - 0 ID=cds-WP_002907731.1;Parent=gene-LI478_RS11060;Dbxref=Genbank:WP_002907731.1;Name=WP_002907731.1;Ontology_term=GO:0022900,GO:0009055,GO:0010181,GO:0016020;gbkey=CDS;gene=rsxG;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416148.1;locus_tag=LI478_RS11060;product=electron transport complex subunit RsxG;protein_id=WP_002907731.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2275334 2276386 . - . ID=gene-LI478_RS11065;Name=rsxD;gbkey=Gene;gene=rsxD;gene_biotype=protein_coding;locus_tag=LI478_RS11065 NZ_CP085478.1 Protein Homology CDS 2275334 2276386 . - 0 ID=cds-WP_020802941.1;Parent=gene-LI478_RS11065;Dbxref=Genbank:WP_020802941.1;Name=WP_020802941.1;Ontology_term=GO:0022900,GO:0055085,GO:0016020;gbkey=CDS;gene=rsxD;go_component=membrane|0016020||IEA;go_process=electron transport chain|0022900||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227246.1;locus_tag=LI478_RS11065;product=electron transport complex subunit RsxD;protein_id=WP_020802941.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2276387 2278546 . - . ID=gene-LI478_RS11070;Name=rsxC;gbkey=Gene;gene=rsxC;gene_biotype=protein_coding;locus_tag=LI478_RS11070 NZ_CP085478.1 Protein Homology CDS 2276387 2278546 . - 0 ID=cds-WP_032415051.1;Parent=gene-LI478_RS11070;Dbxref=Genbank:WP_032415051.1;Name=WP_032415051.1;Ontology_term=GO:0009055,GO:0051539,GO:0016020;gbkey=CDS;gene=rsxC;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004154178.1;locus_tag=LI478_RS11070;product=electron transport complex subunit RsxC;protein_id=WP_032415051.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2278539 2279117 . - . ID=gene-LI478_RS11075;Name=rsxB;gbkey=Gene;gene=rsxB;gene_biotype=protein_coding;locus_tag=LI478_RS11075 NZ_CP085478.1 Protein Homology CDS 2278539 2279117 . - 0 ID=cds-WP_004143816.1;Parent=gene-LI478_RS11075;Dbxref=Genbank:WP_004143816.1;Name=WP_004143816.1;Ontology_term=GO:0022900,GO:0009055,GO:0051536;gbkey=CDS;gene=rsxB;go_function=electron transfer activity|0009055||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020078990.1;locus_tag=LI478_RS11075;product=electron transport complex subunit RsxB;protein_id=WP_004143816.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2279117 2279698 . - . ID=gene-LI478_RS11080;Name=rsxA;gbkey=Gene;gene=rsxA;gene_biotype=protein_coding;locus_tag=LI478_RS11080 NZ_CP085478.1 Protein Homology CDS 2279117 2279698 . - 0 ID=cds-WP_002907658.1;Parent=gene-LI478_RS11080;Dbxref=Genbank:WP_002907658.1;Name=WP_002907658.1;Ontology_term=GO:0022900,GO:0016020;gbkey=CDS;gene=rsxA;go_component=membrane|0016020||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017456621.1;locus_tag=LI478_RS11080;product=electron transport complex subunit RsxA;protein_id=WP_002907658.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2279777 2280217 . - . ID=gene-LI478_RS11085;Name=LI478_RS11085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11085 NZ_CP085478.1 Protein Homology CDS 2279777 2280217 . - 0 ID=cds-WP_002907654.1;Parent=gene-LI478_RS11085;Dbxref=Genbank:WP_002907654.1;Name=WP_002907654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227241.1;locus_tag=LI478_RS11085;product=DUF2569 domain-containing protein;protein_id=WP_002907654.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2280293 2280508 . - . ID=gene-LI478_RS11090;Name=ydgT;gbkey=Gene;gene=ydgT;gene_biotype=protein_coding;locus_tag=LI478_RS11090 NZ_CP085478.1 Protein Homology CDS 2280293 2280508 . - 0 ID=cds-WP_002907652.1;Parent=gene-LI478_RS11090;Dbxref=Genbank:WP_002907652.1;Name=WP_002907652.1;gbkey=CDS;gene=ydgT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460424.3;locus_tag=LI478_RS11090;product=transcription modulator YdgT;protein_id=WP_002907652.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2280725 2282095 . - . ID=gene-LI478_RS11095;Name=LI478_RS11095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11095 NZ_CP085478.1 Protein Homology CDS 2280725 2282095 . - 0 ID=cds-WP_004180160.1;Parent=gene-LI478_RS11095;Dbxref=Genbank:WP_004180160.1;Name=WP_004180160.1;Ontology_term=GO:0030245,GO:0008422;gbkey=CDS;go_function=beta-glucosidase activity|0008422||IEA;go_process=cellulose catabolic process|0030245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227239.1;locus_tag=LI478_RS11095;product=GH1 family beta-glucosidase;protein_id=WP_004180160.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2282211 2282348 . - . ID=gene-LI478_RS11100;Name=blr;gbkey=Gene;gene=blr;gene_biotype=protein_coding;locus_tag=LI478_RS11100 NZ_CP085478.1 Protein Homology CDS 2282211 2282348 . - 0 ID=cds-WP_004898594.1;Parent=gene-LI478_RS11100;Dbxref=Genbank:WP_004898594.1;Name=WP_004898594.1;gbkey=CDS;gene=blr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004227851.1;locus_tag=LI478_RS11100;product=division septum protein Blr;protein_id=WP_004898594.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2282539 2283579 . + . ID=gene-LI478_RS11105;Name=LI478_RS11105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11105 NZ_CP085478.1 Protein Homology CDS 2282539 2283579 . + 0 ID=cds-WP_004214966.1;Parent=gene-LI478_RS11105;Dbxref=Genbank:WP_004214966.1;Name=WP_004214966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227238.1;locus_tag=LI478_RS11105;product=oxidoreductase;protein_id=WP_004214966.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2283615 2284616 . - . ID=gene-LI478_RS11110;Name=add;gbkey=Gene;gene=add;gene_biotype=protein_coding;locus_tag=LI478_RS11110 NZ_CP085478.1 Protein Homology CDS 2283615 2284616 . - 0 ID=cds-WP_004151209.1;Parent=gene-LI478_RS11110;Dbxref=Genbank:WP_004151209.1;Name=WP_004151209.1;Ontology_term=GO:0009168,GO:0004000;gbkey=CDS;gene=add;go_function=adenosine deaminase activity|0004000||IEA;go_process=purine ribonucleoside monophosphate biosynthetic process|0009168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227237.1;locus_tag=LI478_RS11110;product=adenosine deaminase;protein_id=WP_004151209.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2284774 2285928 . - . ID=gene-LI478_RS11115;Name=LI478_RS11115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11115 NZ_CP085478.1 Protein Homology CDS 2284774 2285928 . - 0 ID=cds-WP_032415048.1;Parent=gene-LI478_RS11115;Dbxref=Genbank:WP_032415048.1;Name=WP_032415048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227236.1;locus_tag=LI478_RS11115;product=MFS transporter;protein_id=WP_032415048.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2286203 2286586 . + . ID=gene-LI478_RS11120;Name=LI478_RS11120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11120 NZ_CP085478.1 Protein Homology CDS 2286203 2286586 . + 0 ID=cds-WP_004143807.1;Parent=gene-LI478_RS11120;Dbxref=Genbank:WP_004143807.1;Name=WP_004143807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227235.1;locus_tag=LI478_RS11120;product=helix-turn-helix domain-containing protein;protein_id=WP_004143807.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2286830 2287015 . + . ID=gene-LI478_RS11125;Name=LI478_RS11125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11125 NZ_CP085478.1 Protein Homology CDS 2286830 2287015 . + 0 ID=cds-WP_002907644.1;Parent=gene-LI478_RS11125;Dbxref=Genbank:WP_002907644.1;Name=WP_002907644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227234.1;locus_tag=LI478_RS11125;product=hypothetical protein;protein_id=WP_002907644.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2287025 2287387 . - . ID=gene-LI478_RS11130;Name=LI478_RS11130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11130 NZ_CP085478.1 Protein Homology CDS 2287025 2287387 . - 0 ID=cds-WP_004143806.1;Parent=gene-LI478_RS11130;Dbxref=Genbank:WP_004143806.1;Name=WP_004143806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227233.1;locus_tag=LI478_RS11130;product=hypothetical protein;protein_id=WP_004143806.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2287647 2288174 . + . ID=gene-LI478_RS11135;Name=cybB;gbkey=Gene;gene=cybB;gene_biotype=protein_coding;locus_tag=LI478_RS11135 NZ_CP085478.1 Protein Homology CDS 2287647 2288174 . + 0 ID=cds-WP_032415046.1;Parent=gene-LI478_RS11135;Dbxref=Genbank:WP_032415046.1;Name=WP_032415046.1;Ontology_term=GO:0022904,GO:0009055,GO:0016020;gbkey=CDS;gene=cybB;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227232.1;locus_tag=LI478_RS11135;product=cytochrome b561;protein_id=WP_032415046.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2288279 2288554 . + . ID=gene-LI478_RS11140;Name=LI478_RS11140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11140 NZ_CP085478.1 Protein Homology CDS 2288279 2288554 . + 0 ID=cds-WP_002907563.1;Parent=gene-LI478_RS11140;Dbxref=Genbank:WP_002907563.1;Name=WP_002907563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227231.1;locus_tag=LI478_RS11140;product=metal/formaldehyde-sensitive transcriptional repressor;protein_id=WP_002907563.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2288579 2289697 . + . ID=gene-LI478_RS11145;Name=LI478_RS11145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11145 NZ_CP085478.1 Protein Homology CDS 2288579 2289697 . + 0 ID=cds-WP_032415044.1;Parent=gene-LI478_RS11145;Dbxref=Genbank:WP_032415044.1;Name=WP_032415044.1;Ontology_term=GO:0006113,GO:0009404,GO:0004024,GO:0051903;gbkey=CDS;go_function=alcohol dehydrogenase activity%2C zinc-dependent|0004024||IEA,S-(hydroxymethyl)glutathione dehydrogenase activity|0051903||IEA;go_process=fermentation|0006113||IEA,toxin metabolic process|0009404||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227230.1;locus_tag=LI478_RS11145;product=S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase;protein_id=WP_032415044.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2289767 2292139 . - . ID=gene-LI478_RS11150;Name=LI478_RS11150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11150 NZ_CP085478.1 Protein Homology CDS 2289767 2292139 . - 0 ID=cds-WP_032415043.1;Parent=gene-LI478_RS11150;Dbxref=Genbank:WP_032415043.1;Name=WP_032415043.1;Ontology_term=GO:0016491,GO:0048038,GO:0016020,GO:0030288;gbkey=CDS;go_component=membrane|0016020||IEA,outer membrane-bounded periplasmic space|0030288||IEA;go_function=oxidoreductase activity|0016491||IEA,quinone binding|0048038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227229.1;locus_tag=LI478_RS11150;product=membrane-bound PQQ-dependent dehydrogenase%2C glucose/quinate/shikimate family;protein_id=WP_032415043.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2292439 2293362 . - . ID=gene-LI478_RS11155;Name=LI478_RS11155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11155 NZ_CP085478.1 Protein Homology CDS 2292439 2293362 . - 0 ID=cds-WP_004143800.1;Parent=gene-LI478_RS11155;Dbxref=Genbank:WP_004143800.1;Name=WP_004143800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227228.1;locus_tag=LI478_RS11155;product=LysR substrate-binding domain-containing protein;protein_id=WP_004143800.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2293540 2294160 . - . ID=gene-LI478_RS11160;Name=pcaG;gbkey=Gene;gene=pcaG;gene_biotype=protein_coding;locus_tag=LI478_RS11160 NZ_CP085478.1 Protein Homology CDS 2293540 2294160 . - 0 ID=cds-WP_004184258.1;Parent=gene-LI478_RS11160;Dbxref=Genbank:WP_004184258.1;Name=WP_004184258.1;Ontology_term=GO:0046278,GO:0018578;gbkey=CDS;gene=pcaG;go_function=protocatechuate 3%2C4-dioxygenase activity|0018578||IEA;go_process=3%2C4-dihydroxybenzoate metabolic process|0046278||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227227.1;locus_tag=LI478_RS11160;product=protocatechuate 3%2C4-dioxygenase subunit alpha;protein_id=WP_004184258.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2294157 2294897 . - . ID=gene-LI478_RS11165;Name=pcaH;gbkey=Gene;gene=pcaH;gene_biotype=protein_coding;locus_tag=LI478_RS11165 NZ_CP085478.1 Protein Homology CDS 2294157 2294897 . - 0 ID=cds-WP_002907552.1;Parent=gene-LI478_RS11165;Dbxref=Genbank:WP_002907552.1;Name=WP_002907552.1;Ontology_term=GO:0046278,GO:0018578;gbkey=CDS;gene=pcaH;go_function=protocatechuate 3%2C4-dioxygenase activity|0018578||IEA;go_process=3%2C4-dihydroxybenzoate metabolic process|0046278||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227226.1;locus_tag=LI478_RS11165;product=protocatechuate 3%2C4-dioxygenase subunit beta;protein_id=WP_002907552.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2295137 2296480 . + . ID=gene-LI478_RS11170;Name=LI478_RS11170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11170 NZ_CP085478.1 Protein Homology CDS 2295137 2296480 . + 0 ID=cds-WP_016531132.1;Parent=gene-LI478_RS11170;Dbxref=Genbank:WP_016531132.1;Name=WP_016531132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227225.1;locus_tag=LI478_RS11170;product=VOC family protein;protein_id=WP_016531132.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2296522 2298027 . + . ID=gene-LI478_RS11175;Name=LI478_RS11175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11175 NZ_CP085478.1 Protein Homology CDS 2296522 2298027 . + 0 ID=cds-WP_023278953.1;Parent=gene-LI478_RS11175;Dbxref=Genbank:WP_023278953.1;Name=WP_023278953.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227224.1;locus_tag=LI478_RS11175;product=carboxylesterase/lipase family protein;protein_id=WP_023278953.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2298074 2299162 . - . ID=gene-LI478_RS11180;Name=LI478_RS11180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11180 NZ_CP085478.1 Protein Homology CDS 2298074 2299162 . - 0 ID=cds-WP_009484803.1;Parent=gene-LI478_RS11180;Dbxref=Genbank:WP_009484803.1;Name=WP_009484803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227223.1;locus_tag=LI478_RS11180;product=NAD(P)-dependent alcohol dehydrogenase;protein_id=WP_009484803.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2299600 2301255 . + . ID=gene-LI478_RS11185;Name=LI478_RS11185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11185 NZ_CP085478.1 Protein Homology CDS 2299600 2301255 . + 0 ID=cds-WP_002907489.1;Parent=gene-LI478_RS11185;Dbxref=Genbank:WP_002907489.1;Name=WP_002907489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227222.1;locus_tag=LI478_RS11185;product=glucan biosynthesis protein;protein_id=WP_002907489.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2301309 2301887 . + . ID=gene-LI478_RS11190;Name=rimL;gbkey=Gene;gene=rimL;gene_biotype=protein_coding;locus_tag=LI478_RS11190 NZ_CP085478.1 Protein Homology CDS 2301309 2301887 . + 0 ID=cds-WP_032415040.1;Parent=gene-LI478_RS11190;Dbxref=Genbank:WP_032415040.1;Name=WP_032415040.1;gbkey=CDS;gene=rimL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227221.1;locus_tag=LI478_RS11190;product=50S ribosomal protein L7/L12-serine acetyltransferase;protein_id=WP_032415040.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2301873 2302853 . - . ID=gene-LI478_RS11195;Name=ydcK;gbkey=Gene;gene=ydcK;gene_biotype=protein_coding;locus_tag=LI478_RS11195 NZ_CP085478.1 Protein Homology CDS 2301873 2302853 . - 0 ID=cds-WP_064153409.1;Parent=gene-LI478_RS11195;Dbxref=Genbank:WP_064153409.1;Name=WP_064153409.1;gbkey=CDS;gene=ydcK;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227220.1;locus_tag=LI478_RS11195;product=YdcK family protein;protein_id=WP_064153409.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2302965 2303969 . + . ID=gene-LI478_RS11200;Name=tehA;gbkey=Gene;gene=tehA;gene_biotype=protein_coding;locus_tag=LI478_RS11200 NZ_CP085478.1 Protein Homology CDS 2302965 2303969 . + 0 ID=cds-WP_002907483.1;Parent=gene-LI478_RS11200;Dbxref=Genbank:WP_002907483.1;Name=WP_002907483.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=tehA;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227219.1;locus_tag=LI478_RS11200;product=dicarboxylate transporter/tellurite-resistance protein TehA;protein_id=WP_002907483.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2303966 2304562 . + . ID=gene-LI478_RS11205;Name=tehB;gbkey=Gene;gene=tehB;gene_biotype=protein_coding;locus_tag=LI478_RS11205 NZ_CP085478.1 Protein Homology CDS 2303966 2304562 . + 0 ID=cds-WP_064153407.1;Parent=gene-LI478_RS11205;Dbxref=Genbank:WP_064153407.1;Name=WP_064153407.1;Ontology_term=GO:0046690,GO:0008757;gbkey=CDS;gene=tehB;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=response to tellurium ion|0046690||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227218.1;locus_tag=LI478_RS11205;product=tellurite resistance methyltransferase TehB;protein_id=WP_064153407.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2304824 2305492 . + . ID=gene-LI478_RS11210;Name=LI478_RS11210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11210 NZ_CP085478.1 Protein Homology CDS 2304824 2305492 . + 0 ID=cds-WP_002907480.1;Parent=gene-LI478_RS11210;Dbxref=Genbank:WP_002907480.1;Name=WP_002907480.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227217.1;locus_tag=LI478_RS11210;product=DUF3313 domain-containing protein;protein_id=WP_002907480.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2305539 2306435 . - . ID=gene-LI478_RS11215;Name=LI478_RS11215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11215 NZ_CP085478.1 Protein Homology CDS 2305539 2306435 . - 0 ID=cds-WP_004151212.1;Parent=gene-LI478_RS11215;Dbxref=Genbank:WP_004151212.1;Name=WP_004151212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227216.1;locus_tag=LI478_RS11215;product=DMT family transporter;protein_id=WP_004151212.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2306616 2307485 . + . ID=gene-LI478_RS11220;Name=LI478_RS11220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11220 NZ_CP085478.1 Protein Homology CDS 2306616 2307485 . + 0 ID=cds-WP_004151213.1;Parent=gene-LI478_RS11220;Dbxref=Genbank:WP_004151213.1;Name=WP_004151213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008804671.1;locus_tag=LI478_RS11220;product=AraC family transcriptional regulator;protein_id=WP_004151213.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2307462 2308628 . - . ID=gene-LI478_RS11225;Name=LI478_RS11225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11225 NZ_CP085478.1 Protein Homology CDS 2307462 2308628 . - 0 ID=cds-WP_021313839.1;Parent=gene-LI478_RS11225;Dbxref=Genbank:WP_021313839.1;Name=WP_021313839.1;Ontology_term=GO:0042919,GO:0042925,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=benzoate transmembrane transporter activity|0042925||IEA;go_process=benzoate transport|0042919||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227213.1;locus_tag=LI478_RS11225;product=benzoate/H(+) symporter BenE family transporter;protein_id=WP_021313839.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2308814 2309383 . + . ID=gene-LI478_RS11230;Name=LI478_RS11230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11230 NZ_CP085478.1 Protein Homology CDS 2308814 2309383 . + 0 ID=cds-WP_064153405.1;Parent=gene-LI478_RS11230;Dbxref=Genbank:WP_064153405.1;Name=WP_064153405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227212.1;locus_tag=LI478_RS11230;product=XRE family transcriptional regulator;protein_id=WP_064153405.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2309394 2309561 . - . ID=gene-LI478_RS11235;Name=LI478_RS11235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11235 NZ_CP085478.1 Protein Homology CDS 2309394 2309561 . - 0 ID=cds-WP_032421683.1;Parent=gene-LI478_RS11235;Dbxref=Genbank:WP_032421683.1;Name=WP_032421683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227211.1;locus_tag=LI478_RS11235;product=hypothetical protein;protein_id=WP_032421683.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2309595 2311556 . + . ID=gene-LI478_RS11240;Name=LI478_RS11240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11240 NZ_CP085478.1 Protein Homology CDS 2309595 2311556 . + 0 ID=cds-WP_002907469.1;Parent=gene-LI478_RS11240;Dbxref=Genbank:WP_002907469.1;Name=WP_002907469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227210.1;locus_tag=LI478_RS11240;product=U32 family peptidase;protein_id=WP_002907469.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2311569 2311799 . - . ID=gene-LI478_RS11245;Name=LI478_RS11245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11245 NZ_CP085478.1 Protein Homology CDS 2311569 2311799 . - 0 ID=cds-WP_004143781.1;Parent=gene-LI478_RS11245;Dbxref=Genbank:WP_004143781.1;Name=WP_004143781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227209.1;locus_tag=LI478_RS11245;product=DUF2554 family protein;protein_id=WP_004143781.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2311948 2312295 . - . ID=gene-LI478_RS11250;Name=LI478_RS11250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11250 NZ_CP085478.1 Protein Homology CDS 2311948 2312295 . - 0 ID=cds-WP_064153403.1;Parent=gene-LI478_RS11250;Dbxref=Genbank:WP_064153403.1;Name=WP_064153403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004175928.1;locus_tag=LI478_RS11250;product=hypothetical protein;protein_id=WP_064153403.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2312392 2312517 . - . ID=gene-LI478_RS11255;Name=LI478_RS11255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11255 NZ_CP085478.1 Protein Homology CDS 2312392 2312517 . - 0 ID=cds-WP_004180143.1;Parent=gene-LI478_RS11255;Dbxref=Genbank:WP_004180143.1;Name=WP_004180143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227207.1;locus_tag=LI478_RS11255;product=DUF2474 domain-containing protein;protein_id=WP_004180143.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2312517 2313527 . - . ID=gene-LI478_RS11260;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=LI478_RS11260 NZ_CP085478.1 Protein Homology CDS 2312517 2313527 . - 0 ID=cds-WP_016531444.1;Parent=gene-LI478_RS11260;Dbxref=Genbank:WP_016531444.1;Name=WP_016531444.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydB;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227206.1;locus_tag=LI478_RS11260;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_016531444.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2313527 2314924 . - . ID=gene-LI478_RS11265;Name=LI478_RS11265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11265 NZ_CP085478.1 Protein Homology CDS 2313527 2314924 . - 0 ID=cds-WP_004151214.1;Parent=gene-LI478_RS11265;Dbxref=Genbank:WP_004151214.1;Name=WP_004151214.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227205.1;locus_tag=LI478_RS11265;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_004151214.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2315612 2317024 . + . ID=gene-LI478_RS11270;Name=LI478_RS11270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11270 NZ_CP085478.1 Protein Homology CDS 2315612 2317024 . + 0 ID=cds-WP_004175937.1;Parent=gene-LI478_RS11270;Dbxref=Genbank:WP_004175937.1;Name=WP_004175937.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227204.1;locus_tag=LI478_RS11270;product=PLP-dependent aminotransferase family protein;protein_id=WP_004175937.1;transl_table=11 NZ_CP085478.1 RefSeq pseudogene 2317329 2318474 . + . ID=gene-LI478_RS11275;Name=LI478_RS11275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS11275;pseudo=true NZ_CP085478.1 Protein Homology CDS 2317329 2318474 . + 0 ID=cds-LI478_RS11275;Parent=gene-LI478_RS11275;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227203.1;locus_tag=LI478_RS11275;product=ABC transporter substrate-binding protein;pseudo=true;transl_table=11 NZ_CP085478.1 RefSeq gene 2318491 2319504 . + . ID=gene-LI478_RS11280;Name=LI478_RS11280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11280 NZ_CP085478.1 Protein Homology CDS 2318491 2319504 . + 0 ID=cds-WP_064153400.1;Parent=gene-LI478_RS11280;Dbxref=Genbank:WP_064153400.1;Name=WP_064153400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227202.1;locus_tag=LI478_RS11280;product=ABC transporter ATP-binding protein;protein_id=WP_064153400.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2319506 2320435 . + . ID=gene-LI478_RS11285;Name=LI478_RS11285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11285 NZ_CP085478.1 Protein Homology CDS 2319506 2320435 . + 0 ID=cds-WP_004148552.1;Parent=gene-LI478_RS11285;Dbxref=Genbank:WP_004148552.1;Name=WP_004148552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227201.1;locus_tag=LI478_RS11285;product=ABC transporter permease;protein_id=WP_004148552.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2320425 2321231 . + . ID=gene-LI478_RS11290;Name=LI478_RS11290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11290 NZ_CP085478.1 Protein Homology CDS 2320425 2321231 . + 0 ID=cds-WP_004143773.1;Parent=gene-LI478_RS11290;Dbxref=Genbank:WP_004143773.1;Name=WP_004143773.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227200.1;locus_tag=LI478_RS11290;product=ABC transporter permease;protein_id=WP_004143773.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2321254 2322681 . + . ID=gene-LI478_RS11295;Name=patD;gbkey=Gene;gene=patD;gene_biotype=protein_coding;locus_tag=LI478_RS11295 NZ_CP085478.1 Protein Homology CDS 2321254 2322681 . + 0 ID=cds-WP_064153398.1;Parent=gene-LI478_RS11295;Dbxref=Genbank:WP_064153398.1;Name=WP_064153398.1;Ontology_term=GO:0009447,GO:0019145;gbkey=CDS;gene=patD;go_function=aminobutyraldehyde dehydrogenase activity|0019145||IEA;go_process=putrescine catabolic process|0009447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009307739.1;locus_tag=LI478_RS11295;product=aminobutyraldehyde dehydrogenase;protein_id=WP_064153398.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2323022 2323144 . - . ID=gene-LI478_RS11300;Name=LI478_RS11300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11300 NZ_CP085478.1 Protein Homology CDS 2323022 2323144 . - 0 ID=cds-WP_004175940.1;Parent=gene-LI478_RS11300;Dbxref=Genbank:WP_004175940.1;Name=WP_004175940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227197.1;locus_tag=LI478_RS11300;product=small membrane protein;protein_id=WP_004175940.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2323293 2323490 . + . ID=gene-LI478_RS11305;Name=LI478_RS11305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11305 NZ_CP085478.1 Protein Homology CDS 2323293 2323490 . + 0 ID=cds-WP_004189776.1;Parent=gene-LI478_RS11305;Dbxref=Genbank:WP_004189776.1;Name=WP_004189776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189776.1;locus_tag=LI478_RS11305;product=hypothetical protein;protein_id=WP_004189776.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2323628 2323879 . + . ID=gene-LI478_RS11310;Name=LI478_RS11310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11310 NZ_CP085478.1 Protein Homology CDS 2323628 2323879 . + 0 ID=cds-WP_002906893.1;Parent=gene-LI478_RS11310;Dbxref=Genbank:WP_002906893.1;Name=WP_002906893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227196.1;locus_tag=LI478_RS11310;product=hypothetical protein;protein_id=WP_002906893.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2323931 2324023 . - . ID=gene-LI478_RS11315;Name=yncL;gbkey=Gene;gene=yncL;gene_biotype=protein_coding;locus_tag=LI478_RS11315 NZ_CP085478.1 Protein Homology CDS 2323931 2324023 . - 0 ID=cds-WP_002906891.1;Parent=gene-LI478_RS11315;Dbxref=Genbank:WP_002906891.1;Name=WP_002906891.1;gbkey=CDS;gene=yncL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012968073.1;locus_tag=LI478_RS11315;product=stress response membrane protein YncL;protein_id=WP_002906891.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2324219 2324392 . + . ID=gene-LI478_RS11320;Name=LI478_RS11320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11320 NZ_CP085478.1 Protein Homology CDS 2324219 2324392 . + 0 ID=cds-WP_002906888.1;Parent=gene-LI478_RS11320;Dbxref=Genbank:WP_002906888.1;Name=WP_002906888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227195.1;locus_tag=LI478_RS11320;product=GhoT/OrtT family toxin;protein_id=WP_002906888.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2324481 2325230 . + . ID=gene-LI478_RS11325;Name=LI478_RS11325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11325 NZ_CP085478.1 Protein Homology CDS 2324481 2325230 . + 0 ID=cds-WP_004891556.1;Parent=gene-LI478_RS11325;Dbxref=Genbank:WP_004891556.1;Name=WP_004891556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227194.1;locus_tag=LI478_RS11325;product=alpha/beta hydrolase;protein_id=WP_004891556.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2325244 2326677 . - . ID=gene-LI478_RS11330;Name=LI478_RS11330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11330 NZ_CP085478.1 Protein Homology CDS 2325244 2326677 . - 0 ID=cds-WP_032438349.1;Parent=gene-LI478_RS11330;Dbxref=Genbank:WP_032438349.1;Name=WP_032438349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227193.1;locus_tag=LI478_RS11330;product=aldehyde dehydrogenase;protein_id=WP_032438349.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2326947 2328545 . + . ID=gene-LI478_RS11340;Name=LI478_RS11340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11340 NZ_CP085478.1 Protein Homology CDS 2326947 2328545 . + 0 ID=cds-WP_009484786.1;Parent=gene-LI478_RS11340;Dbxref=Genbank:WP_009484786.1;Name=WP_009484786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020324732.1;locus_tag=LI478_RS11340;product=ABC transporter substrate-binding protein;protein_id=WP_009484786.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2328562 2328795 . + . ID=gene-LI478_RS11345;Name=LI478_RS11345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11345 NZ_CP085478.1 Protein Homology CDS 2328562 2328795 . + 0 ID=cds-WP_002906801.1;Parent=gene-LI478_RS11345;Dbxref=Genbank:WP_002906801.1;Name=WP_002906801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227189.1;locus_tag=LI478_RS11345;product=YdcY family protein;protein_id=WP_002906801.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2328804 2329253 . - . ID=gene-LI478_RS11350;Name=LI478_RS11350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11350 NZ_CP085478.1 Protein Homology CDS 2328804 2329253 . - 0 ID=cds-WP_004180135.1;Parent=gene-LI478_RS11350;Dbxref=Genbank:WP_004180135.1;Name=WP_004180135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227188.1;locus_tag=LI478_RS11350;product=DMT family transporter;protein_id=WP_004180135.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2329250 2329768 . - . ID=gene-LI478_RS11355;Name=LI478_RS11355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11355 NZ_CP085478.1 Protein Homology CDS 2329250 2329768 . - 0 ID=cds-WP_002906796.1;Parent=gene-LI478_RS11355;Dbxref=Genbank:WP_002906796.1;Name=WP_002906796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227187.1;locus_tag=LI478_RS11355;product=GNAT family N-acetyltransferase;protein_id=WP_002906796.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2329931 2330512 . + . ID=gene-LI478_RS11360;Name=LI478_RS11360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11360 NZ_CP085478.1 Protein Homology CDS 2329931 2330512 . + 0 ID=cds-WP_002906794.1;Parent=gene-LI478_RS11360;Dbxref=Genbank:WP_002906794.1;Name=WP_002906794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227186.1;locus_tag=LI478_RS11360;product=XRE family transcriptional regulator;protein_id=WP_002906794.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2330578 2331615 . + . ID=gene-LI478_RS11365;Name=LI478_RS11365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11365 NZ_CP085478.1 Protein Homology CDS 2330578 2331615 . + 0 ID=cds-WP_002906792.1;Parent=gene-LI478_RS11365;Dbxref=Genbank:WP_002906792.1;Name=WP_002906792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227185.1;locus_tag=LI478_RS11365;product=NADP-dependent oxidoreductase;protein_id=WP_002906792.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2331678 2332613 . - . ID=gene-LI478_RS11370;Name=rihA;gbkey=Gene;gene=rihA;gene_biotype=protein_coding;locus_tag=LI478_RS11370 NZ_CP085478.1 Protein Homology CDS 2331678 2332613 . - 0 ID=cds-WP_002906791.1;Parent=gene-LI478_RS11370;Dbxref=Genbank:WP_002906791.1;Name=WP_002906791.1;Ontology_term=GO:0006206,GO:0050263;gbkey=CDS;gene=rihA;go_function=ribosylpyrimidine nucleosidase activity|0050263||IEA;go_process=pyrimidine nucleobase metabolic process|0006206||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227184.1;locus_tag=LI478_RS11370;product=pyrimidine-specific ribonucleoside hydrolase RihA;protein_id=WP_002906791.1;transl_table=11 NZ_CP085478.1 RefSeq pseudogene 2332575 2332804 . + . ID=gene-LI478_RS11375;Name=LI478_RS11375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS11375;pseudo=true NZ_CP085478.1 Protein Homology CDS 2332575 2332804 . + 0 ID=cds-LI478_RS11375;Parent=gene-LI478_RS11375;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227183.1;locus_tag=LI478_RS11375;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP085478.1 RefSeq gene 2332894 2333193 . + . ID=gene-LI478_RS11380;Name=LI478_RS11380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11380 NZ_CP085478.1 Protein Homology CDS 2332894 2333193 . + 0 ID=cds-WP_015958496.1;Parent=gene-LI478_RS11380;Dbxref=Genbank:WP_015958496.1;Name=WP_015958496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227182.1;locus_tag=LI478_RS11380;product=DUF406 domain-containing protein;protein_id=WP_015958496.1;transl_table=11 NZ_CP085478.1 RefSeq pseudogene 2333291 2334997 . - . ID=gene-LI478_RS11385;Name=LI478_RS11385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS11385;pseudo=true NZ_CP085478.1 Protein Homology CDS 2333291 2334997 . - 0 ID=cds-LI478_RS11385;Parent=gene-LI478_RS11385;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227181.1;locus_tag=LI478_RS11385;product=amidohydrolase;pseudo=true;transl_table=11 NZ_CP085478.1 RefSeq gene 2335195 2337300 . - . ID=gene-LI478_RS11390;Name=LI478_RS11390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11390 NZ_CP085478.1 Protein Homology CDS 2335195 2337300 . - 0 ID=cds-WP_002906783.1;Parent=gene-LI478_RS11390;Dbxref=Genbank:WP_002906783.1;Name=WP_002906783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227180.1;locus_tag=LI478_RS11390;product=TonB-dependent receptor;protein_id=WP_002906783.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2337559 2338620 . + . ID=gene-LI478_RS11395;Name=LI478_RS11395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11395 NZ_CP085478.1 Protein Homology CDS 2337559 2338620 . + 0 ID=cds-WP_020802162.1;Parent=gene-LI478_RS11395;Dbxref=Genbank:WP_020802162.1;Name=WP_020802162.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227179.1;locus_tag=LI478_RS11395;product=YncE family protein;protein_id=WP_020802162.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2338789 2339010 . + . ID=gene-LI478_RS11400;Name=LI478_RS11400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11400 NZ_CP085478.1 Protein Homology CDS 2338789 2339010 . + 0 ID=cds-WP_002906779.1;Parent=gene-LI478_RS11400;Dbxref=Genbank:WP_002906779.1;Name=WP_002906779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002906779.1;locus_tag=LI478_RS11400;product=YgdI/YgdR family lipoprotein;protein_id=WP_002906779.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2339061 2340515 . - . ID=gene-LI478_RS11405;Name=ansP;gbkey=Gene;gene=ansP;gene_biotype=protein_coding;locus_tag=LI478_RS11405 NZ_CP085478.1 Protein Homology CDS 2339061 2340515 . - 0 ID=cds-WP_002906778.1;Parent=gene-LI478_RS11405;Dbxref=Genbank:WP_002906778.1;Name=WP_002906778.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;gene=ansP;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227177.1;locus_tag=LI478_RS11405;product=L-asparagine permease;protein_id=WP_002906778.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2340705 2341592 . - . ID=gene-LI478_RS11410;Name=LI478_RS11410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11410 NZ_CP085478.1 Protein Homology CDS 2340705 2341592 . - 0 ID=cds-WP_002906776.1;Parent=gene-LI478_RS11410;Dbxref=Genbank:WP_002906776.1;Name=WP_002906776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019705703.1;locus_tag=LI478_RS11410;product=LysR family transcriptional regulator;protein_id=WP_002906776.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2341866 2342417 . + . ID=gene-LI478_RS11415;Name=LI478_RS11415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11415 NZ_CP085478.1 Protein Homology CDS 2341866 2342417 . + 0 ID=cds-WP_004180132.1;Parent=gene-LI478_RS11415;Dbxref=Genbank:WP_004180132.1;Name=WP_004180132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227174.1;locus_tag=LI478_RS11415;product=adenylate kinase;protein_id=WP_004180132.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2342509 2343516 . + . ID=gene-LI478_RS11420;Name=LI478_RS11420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11420 NZ_CP085478.1 Protein Homology CDS 2342509 2343516 . + 0 ID=cds-WP_064153394.1;Parent=gene-LI478_RS11420;Dbxref=Genbank:WP_064153394.1;Name=WP_064153394.1;Ontology_term=GO:0008150,GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227173.1;locus_tag=LI478_RS11420;product=MsnO8 family LLM class oxidoreductase;protein_id=WP_064153394.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2343506 2344627 . + . ID=gene-LI478_RS11425;Name=LI478_RS11425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11425 NZ_CP085478.1 Protein Homology CDS 2343506 2344627 . + 0 ID=cds-WP_004180131.1;Parent=gene-LI478_RS11425;Dbxref=Genbank:WP_004180131.1;Name=WP_004180131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227172.1;locus_tag=LI478_RS11425;product=M20 peptidase aminoacylase family protein;protein_id=WP_004180131.1;transl_table=11 NZ_CP085478.1 RefSeq pseudogene 2344652 2346915 . + . ID=gene-LI478_RS11430;Name=LI478_RS11430;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS11430;pseudo=true NZ_CP085478.1 Protein Homology CDS 2344652 2346915 . + 0 ID=cds-LI478_RS11430;Parent=gene-LI478_RS11430;Note=This protein belongs to a clade of FMN-dependent monooxygenases%2C within a broader family of flavin-dependent oxidoreductases%2C the luciferase-like monooxygenase (LMM) family%2C some of whose members use coenzyme F420 rather than FMN.%3B frameshifted;Ontology_term=GO:0008152,GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227171.1;locus_tag=LI478_RS11430;product=NtaA/DmoA family FMN-dependent monooxygenase;pseudo=true;transl_table=11 NZ_CP085478.1 RefSeq gene 2346927 2347436 . + . ID=gene-LI478_RS11435;Name=LI478_RS11435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11435 NZ_CP085478.1 Protein Homology CDS 2346927 2347436 . + 0 ID=cds-WP_002906702.1;Parent=gene-LI478_RS11435;Dbxref=Genbank:WP_002906702.1;Name=WP_002906702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227170.1;locus_tag=LI478_RS11435;product=GNAT family N-acetyltransferase;protein_id=WP_002906702.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2347446 2348372 . + . ID=gene-LI478_RS11440;Name=LI478_RS11440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11440 NZ_CP085478.1 Protein Homology CDS 2347446 2348372 . + 0 ID=cds-WP_032415022.1;Parent=gene-LI478_RS11440;Dbxref=Genbank:WP_032415022.1;Name=WP_032415022.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227169.1;locus_tag=LI478_RS11440;product=amino acid ABC transporter permease;protein_id=WP_032415022.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2348356 2349135 . + . ID=gene-LI478_RS11445;Name=LI478_RS11445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11445 NZ_CP085478.1 Protein Homology CDS 2348356 2349135 . + 0 ID=cds-WP_032415020.1;Parent=gene-LI478_RS11445;Dbxref=Genbank:WP_032415020.1;Name=WP_032415020.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227168.1;locus_tag=LI478_RS11445;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_032415020.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2349174 2350025 . + . ID=gene-LI478_RS11450;Name=LI478_RS11450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11450 NZ_CP085478.1 Protein Homology CDS 2349174 2350025 . + 0 ID=cds-WP_072093194.1;Parent=gene-LI478_RS11450;Dbxref=Genbank:WP_072093194.1;Name=WP_072093194.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227167.1;locus_tag=LI478_RS11450;product=transporter substrate-binding domain-containing protein;protein_id=WP_072093194.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2350103 2350720 . + . ID=gene-LI478_RS11455;Name=LI478_RS11455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11455 NZ_CP085478.1 Protein Homology CDS 2350103 2350720 . + 0 ID=cds-WP_021469726.1;Parent=gene-LI478_RS11455;Dbxref=Genbank:WP_021469726.1;Name=WP_021469726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227166.1;locus_tag=LI478_RS11455;product=glutathione S-transferase family protein;protein_id=WP_021469726.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2350791 2351018 . + . ID=gene-LI478_RS11460;Name=pptA;gbkey=Gene;gene=pptA;gene_biotype=protein_coding;locus_tag=LI478_RS11460 NZ_CP085478.1 Protein Homology CDS 2350791 2351018 . + 0 ID=cds-WP_004898536.1;Parent=gene-LI478_RS11460;Dbxref=Genbank:WP_004898536.1;Name=WP_004898536.1;gbkey=CDS;gene=pptA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227165.1;locus_tag=LI478_RS11460;product=tautomerase PptA;protein_id=WP_004898536.1;transl_table=11 NZ_CP085478.1 RefSeq pseudogene 2351058 2351156 . - . ID=gene-LI478_RS11465;Name=LI478_RS11465;end_range=2351156,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS11465;partial=true;pseudo=true NZ_CP085478.1 Protein Homology CDS 2351058 2351156 . - 0 ID=cds-LI478_RS11465;Parent=gene-LI478_RS11465;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2351156,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227163.1;locus_tag=LI478_RS11465;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP085478.1 RefSeq pseudogene 2351322 2351615 . - . ID=gene-LI478_RS26460;Name=LI478_RS26460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS26460;partial=true;pseudo=true;start_range=.,2351322 NZ_CP085478.1 Protein Homology CDS 2351322 2351615 . - 0 ID=cds-LI478_RS26460;Parent=gene-LI478_RS26460;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013756.2;locus_tag=LI478_RS26460;partial=true;product=flavin reductase family protein;pseudo=true;start_range=.,2351322;transl_table=11 NZ_CP085478.1 RefSeq gene 2351935 2352639 . + . ID=gene-LI478_RS11475;Name=LI478_RS11475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11475 NZ_CP085478.1 Protein Homology CDS 2351935 2352639 . + 0 ID=cds-WP_014343115.1;Parent=gene-LI478_RS11475;Dbxref=Genbank:WP_014343115.1;Name=WP_014343115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227158.1;locus_tag=LI478_RS11475;product=ABC transporter ATP-binding protein;protein_id=WP_014343115.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2352636 2353604 . + . ID=gene-LI478_RS11480;Name=LI478_RS11480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11480 NZ_CP085478.1 Protein Homology CDS 2352636 2353604 . + 0 ID=cds-WP_002906621.1;Parent=gene-LI478_RS11480;Dbxref=Genbank:WP_002906621.1;Name=WP_002906621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227157.1;locus_tag=LI478_RS11480;product=ABC transporter substrate-binding protein;protein_id=WP_002906621.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2353662 2355317 . + . ID=gene-LI478_RS11485;Name=LI478_RS11485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11485 NZ_CP085478.1 Protein Homology CDS 2353662 2355317 . + 0 ID=cds-WP_064145530.1;Parent=gene-LI478_RS11485;Dbxref=Genbank:WP_064145530.1;Name=WP_064145530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227156.1;locus_tag=LI478_RS11485;product=iron ABC transporter permease;protein_id=WP_064145530.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2355394 2356239 . + . ID=gene-LI478_RS11490;Name=nhoA;gbkey=Gene;gene=nhoA;gene_biotype=protein_coding;locus_tag=LI478_RS11490 NZ_CP085478.1 Protein Homology CDS 2355394 2356239 . + 0 ID=cds-WP_004175970.1;Parent=gene-LI478_RS11490;Dbxref=Genbank:WP_004175970.1;Name=WP_004175970.1;Ontology_term=GO:0016407;gbkey=CDS;gene=nhoA;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004112839.1;locus_tag=LI478_RS11490;product=N-hydroxyarylamine O-acetyltransferase;protein_id=WP_004175970.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2356910 2357590 . - . ID=gene-LI478_RS11495;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=LI478_RS11495 NZ_CP085478.1 Protein Homology CDS 2356910 2357590 . - 0 ID=cds-WP_004175972.1;Parent=gene-LI478_RS11495;Dbxref=Genbank:WP_004175972.1;Name=WP_004175972.1;Ontology_term=GO:0019645,GO:0008940,GO:0009325;gbkey=CDS;gene=narI;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227154.1;locus_tag=LI478_RS11495;product=respiratory nitrate reductase subunit gamma;protein_id=WP_004175972.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2357587 2358282 . - . ID=gene-LI478_RS11500;Name=narW;gbkey=Gene;gene=narW;gene_biotype=protein_coding;locus_tag=LI478_RS11500 NZ_CP085478.1 Protein Homology CDS 2357587 2358282 . - 0 ID=cds-WP_004180106.1;Parent=gene-LI478_RS11500;Dbxref=Genbank:WP_004180106.1;Name=WP_004180106.1;Ontology_term=GO:0051131,GO:0051082;gbkey=CDS;gene=narW;go_function=unfolded protein binding|0051082||IEA;go_process=chaperone-mediated protein complex assembly|0051131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227153.1;locus_tag=LI478_RS11500;product=nitrate reductase molybdenum cofactor assembly chaperone;protein_id=WP_004180106.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2358282 2359826 . - . ID=gene-LI478_RS11505;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=LI478_RS11505 NZ_CP085478.1 Protein Homology CDS 2358282 2359826 . - 0 ID=cds-WP_064153392.1;Parent=gene-LI478_RS11505;Dbxref=Genbank:WP_064153392.1;Name=WP_064153392.1;Ontology_term=GO:0009061,GO:0008940,GO:0009325;gbkey=CDS;gene=narH;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic respiration|0009061||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460537.1;locus_tag=LI478_RS11505;product=nitrate reductase subunit beta;protein_id=WP_064153392.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2359823 2363563 . - . ID=gene-LI478_RS11510;Name=LI478_RS11510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11510 NZ_CP085478.1 Protein Homology CDS 2359823 2363563 . - 0 ID=cds-WP_064153391.1;Parent=gene-LI478_RS11510;Dbxref=Genbank:WP_064153391.1;Name=WP_064153391.1;Ontology_term=GO:0009061,GO:0008940,GO:0009325;gbkey=CDS;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic respiration|0009061||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227150.1;locus_tag=LI478_RS11510;product=nitrate reductase subunit alpha;protein_id=WP_064153391.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2363678 2365060 . - . ID=gene-LI478_RS11515;Name=LI478_RS11515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11515 NZ_CP085478.1 Protein Homology CDS 2363678 2365060 . - 0 ID=cds-WP_023283774.1;Parent=gene-LI478_RS11515;Dbxref=Genbank:WP_023283774.1;Name=WP_023283774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227149.1;locus_tag=LI478_RS11515;product=NarK family nitrate/nitrite MFS transporter;protein_id=WP_023283774.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2365231 2365806 . - . ID=gene-LI478_RS11520;Name=LI478_RS11520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11520 NZ_CP085478.1 Protein Homology CDS 2365231 2365806 . - 0 ID=cds-WP_004888643.1;Parent=gene-LI478_RS11520;Dbxref=Genbank:WP_004888643.1;Name=WP_004888643.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227148.1;locus_tag=LI478_RS11520;product=TetR family transcriptional regulator;protein_id=WP_004888643.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2365930 2367429 . + . ID=gene-LI478_RS11525;Name=kmrA;gbkey=Gene;gene=kmrA;gene_biotype=protein_coding;locus_tag=LI478_RS11525 NZ_CP085478.1 Protein Homology CDS 2365930 2367429 . + 0 ID=cds-WP_004175980.1;Parent=gene-LI478_RS11525;Dbxref=Genbank:WP_004175980.1;Name=WP_004175980.1;gbkey=CDS;gene=kmrA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227147.1;locus_tag=LI478_RS11525;product=efflux MFS transporter KmrA;protein_id=WP_004175980.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2367424 2368314 . - . ID=gene-LI478_RS11530;Name=LI478_RS11530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11530 NZ_CP085478.1 Protein Homology CDS 2367424 2368314 . - 0 ID=cds-WP_009485870.1;Parent=gene-LI478_RS11530;Dbxref=Genbank:WP_009485870.1;Name=WP_009485870.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227146.1;locus_tag=LI478_RS11530;product=helix-turn-helix domain-containing protein;protein_id=WP_009485870.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2368430 2369593 . + . ID=gene-LI478_RS11535;Name=LI478_RS11535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11535 NZ_CP085478.1 Protein Homology CDS 2368430 2369593 . + 0 ID=cds-WP_072143290.1;Parent=gene-LI478_RS11535;Dbxref=Genbank:WP_072143290.1;Name=WP_072143290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227145.1;locus_tag=LI478_RS11535;product=muconate cycloisomerase family protein;protein_id=WP_072143290.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2369613 2369903 . + . ID=gene-LI478_RS11540;Name=catC;gbkey=Gene;gene=catC;gene_biotype=protein_coding;locus_tag=LI478_RS11540 NZ_CP085478.1 Protein Homology CDS 2369613 2369903 . + 0 ID=cds-WP_002906471.1;Parent=gene-LI478_RS11540;Dbxref=Genbank:WP_002906471.1;Name=WP_002906471.1;Ontology_term=GO:0042952,GO:0016159;gbkey=CDS;gene=catC;go_function=muconolactone delta-isomerase activity|0016159||IEA;go_process=beta-ketoadipate pathway|0042952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227144.1;locus_tag=LI478_RS11540;product=muconolactone Delta-isomerase;protein_id=WP_002906471.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2369970 2370896 . + . ID=gene-LI478_RS11545;Name=catA;gbkey=Gene;gene=catA;gene_biotype=protein_coding;locus_tag=LI478_RS11545 NZ_CP085478.1 Protein Homology CDS 2369970 2370896 . + 0 ID=cds-WP_048331870.1;Parent=gene-LI478_RS11545;Dbxref=Genbank:WP_048331870.1;Name=WP_048331870.1;Ontology_term=GO:0019615,GO:0018576;gbkey=CDS;gene=catA;go_function=catechol 1%2C2-dioxygenase activity|0018576||IEA;go_process=catechol catabolic process%2C ortho-cleavage|0019615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227143.1;locus_tag=LI478_RS11545;product=catechol 1%2C2-dioxygenase;protein_id=WP_048331870.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2371006 2372388 . + . ID=gene-LI478_RS11550;Name=LI478_RS11550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11550 NZ_CP085478.1 Protein Homology CDS 2371006 2372388 . + 0 ID=cds-WP_064153389.1;Parent=gene-LI478_RS11550;Dbxref=Genbank:WP_064153389.1;Name=WP_064153389.1;Ontology_term=GO:0051537;gbkey=CDS;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227142.1;locus_tag=LI478_RS11550;product=Rieske 2Fe-2S domain-containing protein;protein_id=WP_064153389.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2372388 2372873 . + . ID=gene-LI478_RS11555;Name=benB;gbkey=Gene;gene=benB;gene_biotype=protein_coding;locus_tag=LI478_RS11555 NZ_CP085478.1 Protein Homology CDS 2372388 2372873 . + 0 ID=cds-WP_064153387.1;Parent=gene-LI478_RS11555;Dbxref=Genbank:WP_064153387.1;Name=WP_064153387.1;Ontology_term=GO:0006725;gbkey=CDS;gene=benB;go_process=cellular aromatic compound metabolic process|0006725||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227141.1;locus_tag=LI478_RS11555;product=benzoate 1%2C2-dioxygenase small subunit;protein_id=WP_064153387.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2372883 2373899 . + . ID=gene-LI478_RS11560;Name=benC;gbkey=Gene;gene=benC;gene_biotype=protein_coding;locus_tag=LI478_RS11560 NZ_CP085478.1 Protein Homology CDS 2372883 2373899 . + 0 ID=cds-WP_032438360.1;Parent=gene-LI478_RS11560;Dbxref=Genbank:WP_032438360.1;Name=WP_032438360.1;gbkey=CDS;gene=benC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227140.1;locus_tag=LI478_RS11560;product=benzoate 1%2C2-dioxygenase electron transfer component BenC;protein_id=WP_032438360.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2373909 2374682 . + . ID=gene-LI478_RS11565;Name=benD;gbkey=Gene;gene=benD;gene_biotype=protein_coding;locus_tag=LI478_RS11565 NZ_CP085478.1 Protein Homology CDS 2373909 2374682 . + 0 ID=cds-WP_004180092.1;Parent=gene-LI478_RS11565;Dbxref=Genbank:WP_004180092.1;Name=WP_004180092.1;gbkey=CDS;gene=benD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227139.1;locus_tag=LI478_RS11565;product=benzoate diol dehydrogenase BenD;protein_id=WP_004180092.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2374679 2375557 . - . ID=gene-LI478_RS11570;Name=yddG;gbkey=Gene;gene=yddG;gene_biotype=protein_coding;locus_tag=LI478_RS11570 NZ_CP085478.1 Protein Homology CDS 2374679 2375557 . - 0 ID=cds-WP_023313250.1;Parent=gene-LI478_RS11570;Dbxref=Genbank:WP_023313250.1;Name=WP_023313250.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yddG;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227138.1;locus_tag=LI478_RS11570;product=aromatic amino acid DMT transporter YddG;protein_id=WP_023313250.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2375783 2378830 . + . ID=gene-LI478_RS11575;Name=fdnG;gbkey=Gene;gene=fdnG;gene_biotype=protein_coding;locus_tag=LI478_RS11575 NZ_CP085478.1 Protein Homology CDS 2375783 2378830 . + 0 ID=cds-WP_094316000.1;Parent=gene-LI478_RS11575;Dbxref=Genbank:WP_094316000.1;Name=WP_094316000.1;Ontology_term=GO:0015942,GO:0009326;gbkey=CDS;gene=fdnG;go_component=formate dehydrogenase complex|0009326||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460529.1;locus_tag=LI478_RS11575;product=formate dehydrogenase-N subunit alpha;protein_id=WP_094316000.1;transl_except=(pos:2376368..2376370%2Caa:Sec);transl_table=11 NZ_CP085478.1 RefSeq gene 2378842 2379726 . + . ID=gene-LI478_RS11580;Name=fdxH;gbkey=Gene;gene=fdxH;gene_biotype=protein_coding;locus_tag=LI478_RS11580 NZ_CP085478.1 Protein Homology CDS 2378842 2379726 . + 0 ID=cds-WP_064153381.1;Parent=gene-LI478_RS11580;Dbxref=Genbank:WP_064153381.1;Name=WP_064153381.1;Ontology_term=GO:0045333,GO:0008863;gbkey=CDS;gene=fdxH;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA;go_process=cellular respiration|0045333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227135.1;locus_tag=LI478_RS11580;product=formate dehydrogenase subunit beta;protein_id=WP_064153381.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2379719 2380375 . + . ID=gene-LI478_RS11585;Name=fdnI;gbkey=Gene;gene=fdnI;gene_biotype=protein_coding;locus_tag=LI478_RS11585 NZ_CP085478.1 Protein Homology CDS 2379719 2380375 . + 0 ID=cds-WP_002906457.1;Parent=gene-LI478_RS11585;Dbxref=Genbank:WP_002906457.1;Name=WP_002906457.1;gbkey=CDS;gene=fdnI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227134.1;locus_tag=LI478_RS11585;product=formate dehydrogenase-N subunit gamma;protein_id=WP_002906457.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2380428 2380700 . - . ID=gene-LI478_RS11590;Name=LI478_RS11590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11590 NZ_CP085478.1 Protein Homology CDS 2380428 2380700 . - 0 ID=cds-WP_223175062.1;Parent=gene-LI478_RS11590;Dbxref=Genbank:WP_223175062.1;Name=WP_223175062.1;Ontology_term=GO:0006276,GO:0008657;gbkey=CDS;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) inhibitor activity|0008657||IEA;go_process=plasmid maintenance|0006276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008804738.1;locus_tag=LI478_RS11590;product=CcdB family protein;protein_id=WP_223175062.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2380751 2380936 . - . ID=gene-LI478_RS11595;Name=LI478_RS11595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11595 NZ_CP085478.1 Protein Homology CDS 2380751 2380936 . - 0 ID=cds-WP_004175994.1;Parent=gene-LI478_RS11595;Dbxref=Genbank:WP_004175994.1;Name=WP_004175994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227133.1;locus_tag=LI478_RS11595;product=hypothetical protein;protein_id=WP_004175994.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2381115 2381933 . - . ID=gene-LI478_RS11600;Name=ppk2;gbkey=Gene;gene=ppk2;gene_biotype=protein_coding;locus_tag=LI478_RS11600 NZ_CP085478.1 Protein Homology CDS 2381115 2381933 . - 0 ID=cds-WP_004180084.1;Parent=gene-LI478_RS11600;Dbxref=Genbank:WP_004180084.1;Name=WP_004180084.1;Ontology_term=GO:0006793,GO:0008976,GO:0005575;gbkey=CDS;gene=ppk2;go_component=cellular_component|0005575||IEA;go_function=polyphosphate kinase activity|0008976||IEA;go_process=phosphorus metabolic process|0006793||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227132.1;locus_tag=LI478_RS11600;product=polyphosphate kinase 2;protein_id=WP_004180084.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2382001 2382441 . - . ID=gene-LI478_RS11605;Name=LI478_RS11605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11605 NZ_CP085478.1 Protein Homology CDS 2382001 2382441 . - 0 ID=cds-WP_002906451.1;Parent=gene-LI478_RS11605;Dbxref=Genbank:WP_002906451.1;Name=WP_002906451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227131.1;locus_tag=LI478_RS11605;product=VOC family protein;protein_id=WP_002906451.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2382706 2383860 . + . ID=gene-LI478_RS11610;Name=araJ;gbkey=Gene;gene=araJ;gene_biotype=protein_coding;locus_tag=LI478_RS11610 NZ_CP085478.1 Protein Homology CDS 2382706 2383860 . + 0 ID=cds-WP_002906449.1;Parent=gene-LI478_RS11610;Dbxref=Genbank:WP_002906449.1;Name=WP_002906449.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=araJ;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227130.1;locus_tag=LI478_RS11610;product=MFS transporter AraJ;protein_id=WP_002906449.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2383867 2384958 . - . ID=gene-LI478_RS11615;Name=LI478_RS11615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11615 NZ_CP085478.1 Protein Homology CDS 2383867 2384958 . - 0 ID=cds-WP_064153378.1;Parent=gene-LI478_RS11615;Dbxref=Genbank:WP_064153378.1;Name=WP_064153378.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227129.1;locus_tag=LI478_RS11615;product=alkylhydroperoxidase domain protein;protein_id=WP_064153378.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2384968 2385954 . - . ID=gene-LI478_RS11620;Name=LI478_RS11620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11620 NZ_CP085478.1 Protein Homology CDS 2384968 2385954 . - 0 ID=cds-WP_004176005.1;Parent=gene-LI478_RS11620;Dbxref=Genbank:WP_004176005.1;Name=WP_004176005.1;Ontology_term=GO:0016705;gbkey=CDS;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227128.1;locus_tag=LI478_RS11620;product=putative FMN-dependent luciferase-like monooxygenase;protein_id=WP_004176005.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2385954 2387570 . - . ID=gene-LI478_RS11625;Name=LI478_RS11625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11625 NZ_CP085478.1 Protein Homology CDS 2385954 2387570 . - 0 ID=cds-WP_004143737.1;Parent=gene-LI478_RS11625;Dbxref=Genbank:WP_004143737.1;Name=WP_004143737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227127.1;locus_tag=LI478_RS11625;product=ABC transporter ATP-binding protein;protein_id=WP_004143737.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2387567 2388415 . - . ID=gene-LI478_RS11630;Name=LI478_RS11630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11630 NZ_CP085478.1 Protein Homology CDS 2387567 2388415 . - 0 ID=cds-WP_004180077.1;Parent=gene-LI478_RS11630;Dbxref=Genbank:WP_004180077.1;Name=WP_004180077.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227126.1;locus_tag=LI478_RS11630;product=ABC transporter permease;protein_id=WP_004180077.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2388412 2389356 . - . ID=gene-LI478_RS11635;Name=LI478_RS11635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11635 NZ_CP085478.1 Protein Homology CDS 2388412 2389356 . - 0 ID=cds-WP_032411178.1;Parent=gene-LI478_RS11635;Dbxref=Genbank:WP_032411178.1;Name=WP_032411178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227125.1;locus_tag=LI478_RS11635;product=ABC transporter permease;protein_id=WP_032411178.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2389367 2390989 . - . ID=gene-LI478_RS11640;Name=LI478_RS11640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11640 NZ_CP085478.1 Protein Homology CDS 2389367 2390989 . - 0 ID=cds-WP_002906226.1;Parent=gene-LI478_RS11640;Dbxref=Genbank:WP_002906226.1;Name=WP_002906226.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227124.1;locus_tag=LI478_RS11640;product=TIGR04028 family ABC transporter substrate-binding protein;protein_id=WP_002906226.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2391159 2392169 . - . ID=gene-LI478_RS11645;Name=adhP;gbkey=Gene;gene=adhP;gene_biotype=protein_coding;locus_tag=LI478_RS11645 NZ_CP085478.1 Protein Homology CDS 2391159 2392169 . - 0 ID=cds-WP_032411176.1;Parent=gene-LI478_RS11645;Dbxref=Genbank:WP_032411176.1;Name=WP_032411176.1;gbkey=CDS;gene=adhP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227123.1;locus_tag=LI478_RS11645;product=alcohol dehydrogenase AdhP;protein_id=WP_032411176.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2392422 2393021 . + . ID=gene-LI478_RS11650;Name=LI478_RS11650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11650 NZ_CP085478.1 Protein Homology CDS 2392422 2393021 . + 0 ID=cds-WP_002906218.1;Parent=gene-LI478_RS11650;Dbxref=Genbank:WP_002906218.1;Name=WP_002906218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004180075.1;locus_tag=LI478_RS11650;product=inorganic diphosphatase;protein_id=WP_002906218.1;transl_table=11 NZ_CP085478.1 RefSeq pseudogene 2393343 2393432 . + . ID=gene-LI478_RS26465;Name=LI478_RS26465;end_range=2393432,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS26465;partial=true;pseudo=true NZ_CP085478.1 Protein Homology CDS 2393343 2393432 . + 0 ID=cds-LI478_RS26465;Parent=gene-LI478_RS26465;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2393432,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024854.2;locus_tag=LI478_RS26465;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 NZ_CP085478.1 RefSeq pseudogene 2393748 2393900 . - . ID=gene-LI478_RS11660;Name=LI478_RS11660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS11660;partial=true;pseudo=true;start_range=.,2393748 NZ_CP085478.1 Protein Homology CDS 2393748 2393900 . - 0 ID=cds-LI478_RS11660;Parent=gene-LI478_RS11660;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227119.1;locus_tag=LI478_RS11660;partial=true;product=hypothetical protein;pseudo=true;start_range=.,2393748;transl_table=11 NZ_CP085478.1 RefSeq gene 2393832 2394149 . + . ID=gene-LI478_RS11665;Name=LI478_RS11665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11665 NZ_CP085478.1 Protein Homology CDS 2393832 2394149 . + 0 ID=cds-WP_223174638.1;Parent=gene-LI478_RS11665;Dbxref=Genbank:WP_223174638.1;Name=WP_223174638.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025054.2;locus_tag=LI478_RS11665;product=GNAT family N-acetyltransferase;protein_id=WP_223174638.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2394186 2395901 . - . ID=gene-LI478_RS11670;Name=LI478_RS11670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11670 NZ_CP085478.1 Protein Homology CDS 2394186 2395901 . - 0 ID=cds-WP_064153376.1;Parent=gene-LI478_RS11670;Dbxref=Genbank:WP_064153376.1;Name=WP_064153376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227117.1;locus_tag=LI478_RS11670;product=ABC-F family ATP-binding cassette domain-containing protein;protein_id=WP_064153376.1;transl_table=11 NZ_CP085478.1 RefSeq pseudogene 2396262 2396949 . - . ID=gene-LI478_RS11675;Name=LI478_RS11675;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS11675;pseudo=true NZ_CP085478.1 Protein Homology CDS 2396262 2396949 . - 0 ID=cds-LI478_RS11675;Parent=gene-LI478_RS11675;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227116.1;locus_tag=LI478_RS11675;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP085478.1 RefSeq gene 2396946 2397641 . - . ID=gene-LI478_RS11680;Name=LI478_RS11680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11680 NZ_CP085478.1 Protein Homology CDS 2396946 2397641 . - 0 ID=cds-WP_064153374.1;Parent=gene-LI478_RS11680;Dbxref=Genbank:WP_064153374.1;Name=WP_064153374.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227115.1;locus_tag=LI478_RS11680;product=hypothetical protein;protein_id=WP_064153374.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2397825 2399522 . - . ID=gene-LI478_RS11685;Name=LI478_RS11685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11685 NZ_CP085478.1 Protein Homology CDS 2397825 2399522 . - 0 ID=cds-WP_002906125.1;Parent=gene-LI478_RS11685;Dbxref=Genbank:WP_002906125.1;Name=WP_002906125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227114.1;locus_tag=LI478_RS11685;product=NAD-dependent malic enzyme;protein_id=WP_002906125.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2399579 2399707 . + . ID=gene-LI478_RS11690;Name=LI478_RS11690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11690 NZ_CP085478.1 Protein Homology CDS 2399579 2399707 . + 0 ID=cds-WP_002906122.1;Parent=gene-LI478_RS11690;Dbxref=Genbank:WP_002906122.1;Name=WP_002906122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227113.1;locus_tag=LI478_RS11690;product=hypothetical protein;protein_id=WP_002906122.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2399704 2399844 . - . ID=gene-LI478_RS11695;Name=sra;gbkey=Gene;gene=sra;gene_biotype=protein_coding;locus_tag=LI478_RS11695 NZ_CP085478.1 Protein Homology CDS 2399704 2399844 . - 0 ID=cds-WP_004143727.1;Parent=gene-LI478_RS11695;Dbxref=Genbank:WP_004143727.1;Name=WP_004143727.1;gbkey=CDS;gene=sra;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227112.1;locus_tag=LI478_RS11695;product=stationary-phase-induced ribosome-associated protein;protein_id=WP_004143727.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2400022 2400873 . - . ID=gene-LI478_RS11700;Name=LI478_RS11700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11700 NZ_CP085478.1 Protein Homology CDS 2400022 2400873 . - 0 ID=cds-WP_064153372.1;Parent=gene-LI478_RS11700;Dbxref=Genbank:WP_064153372.1;Name=WP_064153372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227111.1;locus_tag=LI478_RS11700;product=Vmh family MBL fold metallo-hydrolase;protein_id=WP_064153372.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2400987 2401880 . + . ID=gene-LI478_RS11705;Name=LI478_RS11705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11705 NZ_CP085478.1 Protein Homology CDS 2400987 2401880 . + 0 ID=cds-WP_064153371.1;Parent=gene-LI478_RS11705;Dbxref=Genbank:WP_064153371.1;Name=WP_064153371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227110.1;locus_tag=LI478_RS11705;product=LysR family transcriptional regulator;protein_id=WP_064153371.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2401948 2402193 . - . ID=gene-LI478_RS11710;Name=LI478_RS11710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11710 NZ_CP085478.1 Protein Homology CDS 2401948 2402193 . - 0 ID=cds-WP_004180069.1;Parent=gene-LI478_RS11710;Dbxref=Genbank:WP_004180069.1;Name=WP_004180069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227109.1;locus_tag=LI478_RS11710;product=YmjA family protein;protein_id=WP_004180069.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2402390 2403304 . - . ID=gene-LI478_RS11715;Name=LI478_RS11715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11715 NZ_CP085478.1 Protein Homology CDS 2402390 2403304 . - 0 ID=cds-WP_004151242.1;Parent=gene-LI478_RS11715;Dbxref=Genbank:WP_004151242.1;Name=WP_004151242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227108.1;locus_tag=LI478_RS11715;product=SDR family oxidoreductase;protein_id=WP_004151242.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2403961 2404146 . + . ID=gene-LI478_RS11720;Name=LI478_RS11720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11720 NZ_CP085478.1 Protein Homology CDS 2403961 2404146 . + 0 ID=cds-WP_004143718.1;Parent=gene-LI478_RS11720;Dbxref=Genbank:WP_004143718.1;Name=WP_004143718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227107.1;locus_tag=LI478_RS11720;product=general stress protein;protein_id=WP_004143718.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2404512 2404727 . + . ID=gene-LI478_RS11725;Name=LI478_RS11725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11725 NZ_CP085478.1 Protein Homology CDS 2404512 2404727 . + 0 ID=cds-WP_004143717.1;Parent=gene-LI478_RS11725;Dbxref=Genbank:WP_004143717.1;Name=WP_004143717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227106.1;locus_tag=LI478_RS11725;product=hypothetical protein;protein_id=WP_004143717.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2404751 2405257 . + . ID=gene-LI478_RS11730;Name=LI478_RS11730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11730 NZ_CP085478.1 Protein Homology CDS 2404751 2405257 . + 0 ID=cds-WP_032414988.1;Parent=gene-LI478_RS11730;Dbxref=Genbank:WP_032414988.1;Name=WP_032414988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227105.1;locus_tag=LI478_RS11730;product=ferritin-like domain-containing protein;protein_id=WP_032414988.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2405274 2405456 . + . ID=gene-LI478_RS11735;Name=LI478_RS11735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11735 NZ_CP085478.1 Protein Homology CDS 2405274 2405456 . + 0 ID=cds-WP_023278969.1;Parent=gene-LI478_RS11735;Dbxref=Genbank:WP_023278969.1;Name=WP_023278969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227104.1;locus_tag=LI478_RS11735;product=hypothetical protein;protein_id=WP_023278969.1;transl_table=11 NZ_CP085478.1 RefSeq pseudogene 2405496 2407120 . + . ID=gene-LI478_RS11740;Name=LI478_RS11740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS11740;pseudo=true NZ_CP085478.1 Protein Homology CDS 2405496 2407120 . + 0 ID=cds-LI478_RS11740;Parent=gene-LI478_RS11740;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227103.1;locus_tag=LI478_RS11740;product=alpha-amylase family protein;pseudo=true;transl_table=11 NZ_CP085478.1 RefSeq gene 2407117 2408112 . - . ID=gene-LI478_RS11745;Name=LI478_RS11745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11745 NZ_CP085478.1 Protein Homology CDS 2407117 2408112 . - 0 ID=cds-WP_004151245.1;Parent=gene-LI478_RS11745;Dbxref=Genbank:WP_004151245.1;Name=WP_004151245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004148483.1;locus_tag=LI478_RS11745;product=SDR family oxidoreductase;protein_id=WP_004151245.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2408431 2408877 . - . ID=gene-LI478_RS11750;Name=LI478_RS11750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11750 NZ_CP085478.1 Protein Homology CDS 2408431 2408877 . - 0 ID=cds-WP_004148482.1;Parent=gene-LI478_RS11750;Dbxref=Genbank:WP_004148482.1;Name=WP_004148482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227099.1;locus_tag=LI478_RS11750;product=DUF421 domain-containing protein;protein_id=WP_004148482.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2408886 2409389 . - . ID=gene-LI478_RS11755;Name=LI478_RS11755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11755 NZ_CP085478.1 Protein Homology CDS 2408886 2409389 . - 0 ID=cds-WP_023313236.1;Parent=gene-LI478_RS11755;Dbxref=Genbank:WP_023313236.1;Name=WP_023313236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227098.1;locus_tag=LI478_RS11755;product=hypothetical protein;protein_id=WP_023313236.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2409534 2409938 . + . ID=gene-LI478_RS11760;Name=LI478_RS11760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11760 NZ_CP085478.1 Protein Homology CDS 2409534 2409938 . + 0 ID=cds-WP_032414986.1;Parent=gene-LI478_RS11760;Dbxref=Genbank:WP_032414986.1;Name=WP_032414986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015874836.1;locus_tag=LI478_RS11760;product=YdeI family stress tolerance OB fold protein;protein_id=WP_032414986.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2409954 2410100 . + . ID=gene-LI478_RS11765;Name=LI478_RS11765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11765 NZ_CP085478.1 Protein Homology CDS 2409954 2410100 . + 0 ID=cds-WP_002906033.1;Parent=gene-LI478_RS11765;Dbxref=Genbank:WP_002906033.1;Name=WP_002906033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227096.1;locus_tag=LI478_RS11765;product=hypothetical protein;protein_id=WP_002906033.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2410214 2410645 . + . ID=gene-LI478_RS11770;Name=LI478_RS11770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11770 NZ_CP085478.1 Protein Homology CDS 2410214 2410645 . + 0 ID=cds-WP_002906030.1;Parent=gene-LI478_RS11770;Dbxref=Genbank:WP_002906030.1;Name=WP_002906030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227095.1;locus_tag=LI478_RS11770;product=OsmC family protein;protein_id=WP_002906030.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2410749 2411618 . + . ID=gene-LI478_RS11775;Name=LI478_RS11775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11775 NZ_CP085478.1 Protein Homology CDS 2410749 2411618 . + 0 ID=cds-WP_004176040.1;Parent=gene-LI478_RS11775;Dbxref=Genbank:WP_004176040.1;Name=WP_004176040.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227094.1;locus_tag=LI478_RS11775;product=oxygenase MpaB family protein;protein_id=WP_004176040.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2411620 2412306 . - . ID=gene-LI478_RS11780;Name=LI478_RS11780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11780 NZ_CP085478.1 Protein Homology CDS 2411620 2412306 . - 0 ID=cds-WP_004184165.1;Parent=gene-LI478_RS11780;Dbxref=Genbank:WP_004184165.1;Name=WP_004184165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227093.1;locus_tag=LI478_RS11780;product=ABC transporter substrate-binding protein;protein_id=WP_004184165.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2412296 2412478 . - . ID=gene-LI478_RS11785;Name=LI478_RS11785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11785 NZ_CP085478.1 Protein Homology CDS 2412296 2412478 . - 0 ID=cds-WP_004143707.1;Parent=gene-LI478_RS11785;Dbxref=Genbank:WP_004143707.1;Name=WP_004143707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227092.1;locus_tag=LI478_RS11785;product=hypothetical protein;protein_id=WP_004143707.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2412528 2413451 . + . ID=gene-LI478_RS11790;Name=LI478_RS11790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11790 NZ_CP085478.1 Protein Homology CDS 2412528 2413451 . + 0 ID=cds-WP_004151892.1;Parent=gene-LI478_RS11790;Dbxref=Genbank:WP_004151892.1;Name=WP_004151892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227091.1;locus_tag=LI478_RS11790;product=cation diffusion facilitator family transporter;protein_id=WP_004151892.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2413701 2414618 . + . ID=gene-LI478_RS11795;Name=LI478_RS11795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11795 NZ_CP085478.1 Protein Homology CDS 2413701 2414618 . + 0 ID=cds-WP_004148478.1;Parent=gene-LI478_RS11795;Dbxref=Genbank:WP_004148478.1;Name=WP_004148478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227090.1;locus_tag=LI478_RS11795;product=bestrophin family ion channel;protein_id=WP_004148478.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2414934 2417234 . + . ID=gene-LI478_RS11800;Name=LI478_RS11800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11800 NZ_CP085478.1 Protein Homology CDS 2414934 2417234 . + 0 ID=cds-WP_004176044.1;Parent=gene-LI478_RS11800;Dbxref=Genbank:WP_004176044.1;Name=WP_004176044.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227089.1;locus_tag=LI478_RS11800;product=FdhF/YdeP family oxidoreductase;protein_id=WP_004176044.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2417384 2418265 . + . ID=gene-LI478_RS11805;Name=LI478_RS11805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11805 NZ_CP085478.1 Protein Homology CDS 2417384 2418265 . + 0 ID=cds-WP_023328574.1;Parent=gene-LI478_RS11805;Dbxref=Genbank:WP_023328574.1;Name=WP_023328574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227088.1;locus_tag=LI478_RS11805;product=LysR family transcriptional regulator;protein_id=WP_023328574.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2418502 2418816 . + . ID=gene-LI478_RS11810;Name=LI478_RS11810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11810 NZ_CP085478.1 Protein Homology CDS 2418502 2418816 . + 0 ID=cds-WP_004180041.1;Parent=gene-LI478_RS11810;Dbxref=Genbank:WP_004180041.1;Name=WP_004180041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227080.1;locus_tag=LI478_RS11810;product=PTS lactose/cellobiose transporter subunit IIA;protein_id=WP_004180041.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2418857 2420263 . - . ID=gene-LI478_RS11815;Name=LI478_RS11815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11815 NZ_CP085478.1 Protein Homology CDS 2418857 2420263 . - 0 ID=cds-WP_064153369.1;Parent=gene-LI478_RS11815;Dbxref=Genbank:WP_064153369.1;Name=WP_064153369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227079.1;locus_tag=LI478_RS11815;product=MFS transporter;protein_id=WP_064153369.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2420851 2421531 . + . ID=gene-LI478_RS11820;Name=LI478_RS11820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11820 NZ_CP085478.1 Protein Homology CDS 2420851 2421531 . + 0 ID=cds-WP_064153367.1;Parent=gene-LI478_RS11820;Dbxref=Genbank:WP_064153367.1;Name=WP_064153367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227078.1;locus_tag=LI478_RS11820;product=MgtC family protein;protein_id=WP_064153367.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2421629 2422690 . + . ID=gene-LI478_RS11825;Name=zapE;gbkey=Gene;gene=zapE;gene_biotype=protein_coding;locus_tag=LI478_RS11825 NZ_CP085478.1 Protein Homology CDS 2421629 2422690 . + 0 ID=cds-WP_064153365.1;Parent=gene-LI478_RS11825;Dbxref=Genbank:WP_064153365.1;Name=WP_064153365.1;Ontology_term=GO:0051301,GO:0005524,GO:0016887;gbkey=CDS;gene=zapE;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004176048.1;locus_tag=LI478_RS11825;product=cell division protein ZapE;protein_id=WP_064153365.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2422725 2424902 . - . ID=gene-LI478_RS11830;Name=katG;gbkey=Gene;gene=katG;gene_biotype=protein_coding;locus_tag=LI478_RS11830 NZ_CP085478.1 Protein Homology CDS 2422725 2424902 . - 0 ID=cds-WP_004180028.1;Parent=gene-LI478_RS11830;Dbxref=Genbank:WP_004180028.1;Name=WP_004180028.1;Ontology_term=GO:0006979,GO:0004096,GO:0004601;gbkey=CDS;gene=katG;go_function=catalase activity|0004096||IEA,peroxidase activity|0004601||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227075.1;locus_tag=LI478_RS11830;product=catalase/peroxidase HPI;protein_id=WP_004180028.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2425171 2426103 . - . ID=gene-LI478_RS11835;Name=LI478_RS11835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11835 NZ_CP085478.1 Protein Homology CDS 2425171 2426103 . - 0 ID=cds-WP_064153363.1;Parent=gene-LI478_RS11835;Dbxref=Genbank:WP_064153363.1;Name=WP_064153363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227074.1;locus_tag=LI478_RS11835;product=LysR family transcriptional regulator;protein_id=WP_064153363.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2426203 2426637 . + . ID=gene-LI478_RS11840;Name=LI478_RS11840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11840 NZ_CP085478.1 Protein Homology CDS 2426203 2426637 . + 0 ID=cds-WP_004143693.1;Parent=gene-LI478_RS11840;Dbxref=Genbank:WP_004143693.1;Name=WP_004143693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227073.1;locus_tag=LI478_RS11840;product=DMT family transporter;protein_id=WP_004143693.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2426647 2427123 . + . ID=gene-LI478_RS11845;Name=LI478_RS11845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11845 NZ_CP085478.1 Protein Homology CDS 2426647 2427123 . + 0 ID=cds-WP_032411542.1;Parent=gene-LI478_RS11845;Dbxref=Genbank:WP_032411542.1;Name=WP_032411542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227072.1;locus_tag=LI478_RS11845;product=DMT family transporter;protein_id=WP_032411542.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2427322 2429232 . + . ID=gene-LI478_RS11850;Name=mrdA;gbkey=Gene;gene=mrdA;gene_biotype=protein_coding;locus_tag=LI478_RS11850 NZ_CP085478.1 Protein Homology CDS 2427322 2429232 . + 0 ID=cds-WP_032411541.1;Parent=gene-LI478_RS11850;Dbxref=Genbank:WP_032411541.1;Name=WP_032411541.1;Ontology_term=GO:0009252,GO:0003824;gbkey=CDS;gene=mrdA;go_function=catalytic activity|0003824||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016946773.1;locus_tag=LI478_RS11850;product=penicillin-binding protein 2;protein_id=WP_032411541.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2429345 2430082 . + . ID=gene-LI478_RS11855;Name=LI478_RS11855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11855 NZ_CP085478.1 Protein Homology CDS 2429345 2430082 . + 0 ID=cds-WP_040026001.1;Parent=gene-LI478_RS11855;Dbxref=Genbank:WP_040026001.1;Name=WP_040026001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227070.1;locus_tag=LI478_RS11855;product=glutamine amidotransferase;protein_id=WP_040026001.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2430079 2432364 . - . ID=gene-LI478_RS11860;Name=pqqF;gbkey=Gene;gene=pqqF;gene_biotype=protein_coding;locus_tag=LI478_RS11860 NZ_CP085478.1 Protein Homology CDS 2430079 2432364 . - 0 ID=cds-WP_064153362.1;Parent=gene-LI478_RS11860;Dbxref=Genbank:WP_064153362.1;Name=WP_064153362.1;Ontology_term=GO:0018189,GO:0004222;gbkey=CDS;gene=pqqF;go_function=metalloendopeptidase activity|0004222||IEA;go_process=pyrroloquinoline quinone biosynthetic process|0018189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004891744.1;locus_tag=LI478_RS11860;product=pyrroloquinoline quinone biosynthesis protein PqqF;protein_id=WP_064153362.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2432364 2433506 . - . ID=gene-LI478_RS11865;Name=pqqE;gbkey=Gene;gene=pqqE;gene_biotype=protein_coding;locus_tag=LI478_RS11865 NZ_CP085478.1 Protein Homology CDS 2432364 2433506 . - 0 ID=cds-WP_032414975.1;Parent=gene-LI478_RS11865;Dbxref=Genbank:WP_032414975.1;Name=WP_032414975.1;Ontology_term=GO:0018149,GO:0018189;gbkey=CDS;gene=pqqE;go_process=peptide cross-linking|0018149||IEA,pyrroloquinoline quinone biosynthetic process|0018189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227067.1;locus_tag=LI478_RS11865;product=pyrroloquinoline quinone biosynthesis protein PqqE;protein_id=WP_032414975.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2433493 2433771 . - . ID=gene-LI478_RS11870;Name=pqqD;gbkey=Gene;gene=pqqD;gene_biotype=protein_coding;locus_tag=LI478_RS11870 NZ_CP085478.1 Protein Homology CDS 2433493 2433771 . - 0 ID=cds-WP_004143686.1;Parent=gene-LI478_RS11870;Dbxref=Genbank:WP_004143686.1;Name=WP_004143686.1;Ontology_term=GO:0018189,GO:0048038;gbkey=CDS;gene=pqqD;go_function=quinone binding|0048038||IEA;go_process=pyrroloquinoline quinone biosynthetic process|0018189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227066.1;locus_tag=LI478_RS11870;product=pyrroloquinoline quinone biosynthesis peptide chaperone PqqD;protein_id=WP_004143686.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2433774 2434529 . - . ID=gene-LI478_RS11875;Name=pqqC;gbkey=Gene;gene=pqqC;gene_biotype=protein_coding;locus_tag=LI478_RS11875 NZ_CP085478.1 Protein Homology CDS 2433774 2434529 . - 0 ID=cds-WP_064153360.1;Parent=gene-LI478_RS11875;Dbxref=Genbank:WP_064153360.1;Name=WP_064153360.1;Ontology_term=GO:0018189;gbkey=CDS;gene=pqqC;go_process=pyrroloquinoline quinone biosynthetic process|0018189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227065.1;locus_tag=LI478_RS11875;product=pyrroloquinoline-quinone synthase PqqC;protein_id=WP_064153360.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2434523 2435449 . - . ID=gene-LI478_RS11880;Name=pqqB;gbkey=Gene;gene=pqqB;gene_biotype=protein_coding;locus_tag=LI478_RS11880 NZ_CP085478.1 Protein Homology CDS 2434523 2435449 . - 0 ID=cds-WP_032431831.1;Parent=gene-LI478_RS11880;Dbxref=Genbank:WP_032431831.1;Name=WP_032431831.1;Ontology_term=GO:0018189;gbkey=CDS;gene=pqqB;go_process=pyrroloquinoline quinone biosynthetic process|0018189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227064.1;locus_tag=LI478_RS11880;product=pyrroloquinoline quinone biosynthesis protein PqqB;protein_id=WP_032431831.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2435504 2435575 . - . ID=gene-LI478_RS11885;Name=pqqA;gbkey=Gene;gene=pqqA;gene_biotype=protein_coding;locus_tag=LI478_RS11885 NZ_CP085478.1 Protein Homology CDS 2435504 2435575 . - 0 ID=cds-WP_002905689.1;Parent=gene-LI478_RS11885;Dbxref=Genbank:WP_002905689.1;Name=WP_002905689.1;Ontology_term=GO:0018189,GO:0003824;gbkey=CDS;gene=pqqA;go_function=catalytic activity|0003824||IEA;go_process=pyrroloquinoline quinone biosynthetic process|0018189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010245082.1;locus_tag=LI478_RS11885;product=pyrroloquinoline quinone precursor peptide PqqA;protein_id=WP_002905689.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2435712 2436731 . - . ID=gene-LI478_RS11890;Name=LI478_RS11890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11890 NZ_CP085478.1 Protein Homology CDS 2435712 2436731 . - 0 ID=cds-WP_064153349.1;Parent=gene-LI478_RS11890;Dbxref=Genbank:WP_064153349.1;Name=WP_064153349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227063.1;locus_tag=LI478_RS11890;product=dipeptidase;protein_id=WP_064153349.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2436975 2437967 . + . ID=gene-LI478_RS11895;Name=LI478_RS11895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11895 NZ_CP085478.1 Protein Homology CDS 2436975 2437967 . + 0 ID=cds-WP_004180015.1;Parent=gene-LI478_RS11895;Dbxref=Genbank:WP_004180015.1;Name=WP_004180015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227062.1;locus_tag=LI478_RS11895;product=alpha/beta hydrolase;protein_id=WP_004180015.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2438054 2438794 . + . ID=gene-LI478_RS11900;Name=LI478_RS11900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11900 NZ_CP085478.1 Protein Homology CDS 2438054 2438794 . + 0 ID=cds-WP_004176065.1;Parent=gene-LI478_RS11900;Dbxref=Genbank:WP_004176065.1;Name=WP_004176065.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227061.1;locus_tag=LI478_RS11900;product=response regulator;protein_id=WP_004176065.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2438791 2440134 . + . ID=gene-LI478_RS11905;Name=LI478_RS11905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11905 NZ_CP085478.1 Protein Homology CDS 2438791 2440134 . + 0 ID=cds-WP_064153347.1;Parent=gene-LI478_RS11905;Dbxref=Genbank:WP_064153347.1;Name=WP_064153347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227060.1;locus_tag=LI478_RS11905;product=ATP-binding protein;protein_id=WP_064153347.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2440237 2441427 . + . ID=gene-LI478_RS11910;Name=LI478_RS11910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11910 NZ_CP085478.1 Protein Homology CDS 2440237 2441427 . + 0 ID=cds-WP_040153026.1;Parent=gene-LI478_RS11910;Dbxref=Genbank:WP_040153026.1;Name=WP_040153026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227059.1;locus_tag=LI478_RS11910;product=cytochrome c biogenesis protein/redoxin;protein_id=WP_040153026.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2441537 2442430 . - . ID=gene-LI478_RS11915;Name=LI478_RS11915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11915 NZ_CP085478.1 Protein Homology CDS 2441537 2442430 . - 0 ID=cds-WP_064153345.1;Parent=gene-LI478_RS11915;Dbxref=Genbank:WP_064153345.1;Name=WP_064153345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227058.1;locus_tag=LI478_RS11915;product=LysR substrate-binding domain-containing protein;protein_id=WP_064153345.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2442624 2444105 . - . ID=gene-LI478_RS11920;Name=LI478_RS11920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11920 NZ_CP085478.1 Protein Homology CDS 2442624 2444105 . - 0 ID=cds-WP_074185276.1;Parent=gene-LI478_RS11920;Dbxref=Genbank:WP_074185276.1;Name=WP_074185276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227057.1;locus_tag=LI478_RS11920;product=aspartate aminotransferase family protein;protein_id=WP_074185276.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2444115 2445500 . - . ID=gene-LI478_RS11925;Name=LI478_RS11925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11925 NZ_CP085478.1 Protein Homology CDS 2444115 2445500 . - 0 ID=cds-WP_002905540.1;Parent=gene-LI478_RS11925;Dbxref=Genbank:WP_002905540.1;Name=WP_002905540.1;Ontology_term=GO:0009058,GO:0008483,GO:0030170;gbkey=CDS;go_function=transaminase activity|0008483||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227056.1;locus_tag=LI478_RS11925;product=diaminobutyrate--2-oxoglutarate transaminase;protein_id=WP_002905540.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2445807 2446742 . - . ID=gene-LI478_RS11930;Name=LI478_RS11930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11930 NZ_CP085478.1 Protein Homology CDS 2445807 2446742 . - 0 ID=cds-WP_002905537.1;Parent=gene-LI478_RS11930;Dbxref=Genbank:WP_002905537.1;Name=WP_002905537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227055.1;locus_tag=LI478_RS11930;product=ABC transporter substrate-binding protein;protein_id=WP_002905537.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2446767 2447507 . - . ID=gene-LI478_RS11935;Name=LI478_RS11935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11935 NZ_CP085478.1 Protein Homology CDS 2446767 2447507 . - 0 ID=cds-WP_004180004.1;Parent=gene-LI478_RS11935;Dbxref=Genbank:WP_004180004.1;Name=WP_004180004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227054.1;locus_tag=LI478_RS11935;product=ABC transporter permease;protein_id=WP_004180004.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2447504 2448232 . - . ID=gene-LI478_RS11940;Name=LI478_RS11940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11940 NZ_CP085478.1 Protein Homology CDS 2447504 2448232 . - 0 ID=cds-WP_004180001.1;Parent=gene-LI478_RS11940;Dbxref=Genbank:WP_004180001.1;Name=WP_004180001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227053.1;locus_tag=LI478_RS11940;product=ABC transporter ATP-binding protein;protein_id=WP_004180001.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2448229 2448924 . - . ID=gene-LI478_RS11945;Name=tenA;gbkey=Gene;gene=tenA;gene_biotype=protein_coding;locus_tag=LI478_RS11945 NZ_CP085478.1 Protein Homology CDS 2448229 2448924 . - 0 ID=cds-WP_032436411.1;Parent=gene-LI478_RS11945;Dbxref=Genbank:WP_032436411.1;Name=WP_032436411.1;Ontology_term=GO:0006772,GO:0050334;gbkey=CDS;gene=tenA;go_function=thiaminase activity|0050334||IEA;go_process=thiamine metabolic process|0006772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227052.1;locus_tag=LI478_RS11945;product=thiaminase II;protein_id=WP_032436411.1;transl_table=11 NZ_CP085478.1 cmsearch riboswitch 2448993 2449094 . - . ID=id-NZ_CP085478.1:2448993..2449094;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_CP085478.1 RefSeq gene 2449095 2449223 . + . ID=gene-LI478_RS11950;Name=LI478_RS11950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11950 NZ_CP085478.1 Protein Homology CDS 2449095 2449223 . + 0 ID=cds-WP_160512513.1;Parent=gene-LI478_RS11950;Dbxref=Genbank:WP_160512513.1;Name=WP_160512513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227051.1;locus_tag=LI478_RS11950;product=hypothetical protein;protein_id=WP_160512513.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2449289 2450395 . + . ID=gene-LI478_RS11955;Name=LI478_RS11955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11955 NZ_CP085478.1 Protein Homology CDS 2449289 2450395 . + 0 ID=cds-WP_064153341.1;Parent=gene-LI478_RS11955;Dbxref=Genbank:WP_064153341.1;Name=WP_064153341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227050.1;locus_tag=LI478_RS11955;product=DUF4056 domain-containing protein;protein_id=WP_064153341.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2450433 2451605 . - . ID=gene-LI478_RS11960;Name=LI478_RS11960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11960 NZ_CP085478.1 Protein Homology CDS 2450433 2451605 . - 0 ID=cds-WP_064153339.1;Parent=gene-LI478_RS11960;Dbxref=Genbank:WP_064153339.1;Name=WP_064153339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227049.1;locus_tag=LI478_RS11960;product=Gfo/Idh/MocA family oxidoreductase;protein_id=WP_064153339.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2451619 2452542 . - . ID=gene-LI478_RS11965;Name=LI478_RS11965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11965 NZ_CP085478.1 Protein Homology CDS 2451619 2452542 . - 0 ID=cds-WP_040153575.1;Parent=gene-LI478_RS11965;Dbxref=Genbank:WP_040153575.1;Name=WP_040153575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227048.1;locus_tag=LI478_RS11965;product=TIM barrel protein;protein_id=WP_040153575.1;transl_table=11 NZ_CP085478.1 RefSeq pseudogene 2452735 2453775 . - . ID=gene-LI478_RS11970;Name=LI478_RS11970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS11970;pseudo=true NZ_CP085478.1 Protein Homology CDS 2452735 2453775 . - 0 ID=cds-LI478_RS11970;Parent=gene-LI478_RS11970;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227047.1;locus_tag=LI478_RS11970;product=LacI family DNA-binding transcriptional regulator;pseudo=true;transl_table=11 NZ_CP085478.1 RefSeq gene 2454174 2455430 . + . ID=gene-LI478_RS11975;Name=LI478_RS11975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11975 NZ_CP085478.1 Protein Homology CDS 2454174 2455430 . + 0 ID=cds-WP_064159545.1;Parent=gene-LI478_RS11975;Dbxref=Genbank:WP_064159545.1;Name=WP_064159545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227046.1;locus_tag=LI478_RS11975;product=sensor domain-containing diguanylate cyclase;protein_id=WP_064159545.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2455529 2456839 . - . ID=gene-LI478_RS11980;Name=guaD;gbkey=Gene;gene=guaD;gene_biotype=protein_coding;locus_tag=LI478_RS11980 NZ_CP085478.1 Protein Homology CDS 2455529 2456839 . - 0 ID=cds-WP_032414967.1;Parent=gene-LI478_RS11980;Dbxref=Genbank:WP_032414967.1;Name=WP_032414967.1;Ontology_term=GO:0006147,GO:0008892;gbkey=CDS;gene=guaD;go_function=guanine deaminase activity|0008892||IEA;go_process=guanine catabolic process|0006147||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227045.1;locus_tag=LI478_RS11980;product=guanine deaminase;protein_id=WP_032414967.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2456941 2458437 . - . ID=gene-LI478_RS11985;Name=LI478_RS11985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11985 NZ_CP085478.1 Protein Homology CDS 2456941 2458437 . - 0 ID=cds-WP_032414966.1;Parent=gene-LI478_RS11985;Dbxref=Genbank:WP_032414966.1;Name=WP_032414966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227044.1;locus_tag=LI478_RS11985;product=NCS1 family nucleobase:cation symporter-1;protein_id=WP_032414966.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2458582 2459298 . + . ID=gene-LI478_RS11990;Name=LI478_RS11990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS11990 NZ_CP085478.1 Protein Homology CDS 2458582 2459298 . + 0 ID=cds-WP_004179987.1;Parent=gene-LI478_RS11990;Dbxref=Genbank:WP_004179987.1;Name=WP_004179987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227043.1;locus_tag=LI478_RS11990;product=GntR family transcriptional regulator;protein_id=WP_004179987.1;transl_table=11 NZ_CP085478.1 RefSeq pseudogene 2459298 2460169 . + . ID=gene-LI478_RS11995;Name=hpxA;gbkey=Gene;gene=hpxA;gene_biotype=pseudogene;locus_tag=LI478_RS11995;pseudo=true NZ_CP085478.1 Protein Homology CDS 2459298 2460169 . + 0 ID=cds-LI478_RS11995;Parent=gene-LI478_RS11995;Note=frameshifted;gbkey=CDS;gene=hpxA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227042.1;locus_tag=LI478_RS11995;product=allantoin racemase;pseudo=true;transl_table=11 NZ_CP085478.1 RefSeq gene 2460054 2460986 . + . ID=gene-LI478_RS12000;Name=puuE;gbkey=Gene;gene=puuE;gene_biotype=protein_coding;locus_tag=LI478_RS12000 NZ_CP085478.1 Protein Homology CDS 2460054 2460986 . + 0 ID=cds-WP_004224949.1;Parent=gene-LI478_RS12000;Dbxref=Genbank:WP_004224949.1;Name=WP_004224949.1;Ontology_term=GO:0000256,GO:0016810;gbkey=CDS;gene=puuE;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;go_process=allantoin catabolic process|0000256||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004202535.1;locus_tag=LI478_RS12000;product=allantoinase PuuE;protein_id=WP_004224949.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2461075 2461866 . - . ID=gene-LI478_RS12005;Name=LI478_RS12005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12005 NZ_CP085478.1 Protein Homology CDS 2461075 2461866 . - 0 ID=cds-WP_021314009.1;Parent=gene-LI478_RS12005;Dbxref=Genbank:WP_021314009.1;Name=WP_021314009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227040.1;locus_tag=LI478_RS12005;product=sulfite exporter TauE/SafE family protein;protein_id=WP_021314009.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2461976 2462743 . + . ID=gene-LI478_RS12010;Name=LI478_RS12010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12010 NZ_CP085478.1 Protein Homology CDS 2461976 2462743 . + 0 ID=cds-WP_004891800.1;Parent=gene-LI478_RS12010;Dbxref=Genbank:WP_004891800.1;Name=WP_004891800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227039.1;locus_tag=LI478_RS12010;product=helix-turn-helix transcriptional regulator;protein_id=WP_004891800.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2462946 2463170 . + . ID=gene-LI478_RS12015;Name=LI478_RS12015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12015 NZ_CP085478.1 Protein Homology CDS 2462946 2463170 . + 0 ID=cds-WP_021314011.1;Parent=gene-LI478_RS12015;Dbxref=Genbank:WP_021314011.1;Name=WP_021314011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227038.1;locus_tag=LI478_RS12015;product=hypothetical protein;protein_id=WP_021314011.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2463395 2464387 . + . ID=gene-LI478_RS12020;Name=LI478_RS12020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12020 NZ_CP085478.1 Protein Homology CDS 2463395 2464387 . + 0 ID=cds-WP_064153736.1;Parent=gene-LI478_RS12020;Dbxref=Genbank:WP_064153736.1;Name=WP_064153736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013357519.1;locus_tag=LI478_RS12020;product=hypothetical protein;protein_id=WP_064153736.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2464783 2465418 . - . ID=gene-LI478_RS12025;Name=hxsA;gbkey=Gene;gene=hxsA;gene_biotype=protein_coding;locus_tag=LI478_RS12025 NZ_CP085478.1 Protein Homology CDS 2464783 2465418 . - 0 ID=cds-WP_071829955.1;Parent=gene-LI478_RS12025;Dbxref=Genbank:WP_071829955.1;Name=WP_071829955.1;gbkey=CDS;gene=hxsA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016236322.1;locus_tag=LI478_RS12025;product=His-Xaa-Ser repeat protein HxsA;protein_id=WP_071829955.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2465415 2466527 . - . ID=gene-LI478_RS12030;Name=hxsC;gbkey=Gene;gene=hxsC;gene_biotype=protein_coding;locus_tag=LI478_RS12030 NZ_CP085478.1 Protein Homology CDS 2465415 2466527 . - 0 ID=cds-WP_032104306.1;Parent=gene-LI478_RS12030;Dbxref=Genbank:WP_032104306.1;Name=WP_032104306.1;gbkey=CDS;gene=hxsC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012134292.1;locus_tag=LI478_RS12030;product=His-Xaa-Ser system radical SAM maturase HxsC;protein_id=WP_032104306.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2466520 2467908 . - . ID=gene-LI478_RS12035;Name=hxsB;gbkey=Gene;gene=hxsB;gene_biotype=protein_coding;locus_tag=LI478_RS12035 NZ_CP085478.1 Protein Homology CDS 2466520 2467908 . - 0 ID=cds-WP_040226037.1;Parent=gene-LI478_RS12035;Dbxref=Genbank:WP_040226037.1;Name=WP_040226037.1;gbkey=CDS;gene=hxsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007705390.1;locus_tag=LI478_RS12035;product=His-Xaa-Ser system radical SAM maturase HxsB;protein_id=WP_040226037.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2467908 2468180 . - . ID=gene-LI478_RS12040;Name=hxsD;gbkey=Gene;gene=hxsD;gene_biotype=protein_coding;locus_tag=LI478_RS12040 NZ_CP085478.1 Protein Homology CDS 2467908 2468180 . - 0 ID=cds-WP_000333416.1;Parent=gene-LI478_RS12040;Dbxref=Genbank:WP_000333416.1;Name=WP_000333416.1;gbkey=CDS;gene=hxsD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000333421.1;locus_tag=LI478_RS12040;product=His-Xaa-Ser system protein HxsD;protein_id=WP_000333416.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2468450 2469175 . - . ID=gene-LI478_RS12045;Name=LI478_RS12045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12045 NZ_CP085478.1 Protein Homology CDS 2468450 2469175 . - 0 ID=cds-WP_004199957.1;Parent=gene-LI478_RS12045;Dbxref=Genbank:WP_004199957.1;Name=WP_004199957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227033.1;locus_tag=LI478_RS12045;product=GMP synthase;protein_id=WP_004199957.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2469268 2470068 . + . ID=gene-LI478_RS12050;Name=LI478_RS12050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12050 NZ_CP085478.1 Protein Homology CDS 2469268 2470068 . + 0 ID=cds-WP_175345171.1;Parent=gene-LI478_RS12050;Dbxref=Genbank:WP_175345171.1;Name=WP_175345171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189994.1;locus_tag=LI478_RS12050;product=helix-turn-helix transcriptional regulator;protein_id=WP_175345171.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2470530 2471429 . - . ID=gene-LI478_RS12055;Name=LI478_RS12055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12055 NZ_CP085478.1 Protein Homology CDS 2470530 2471429 . - 0 ID=cds-WP_023316880.1;Parent=gene-LI478_RS12055;Dbxref=Genbank:WP_023316880.1;Name=WP_023316880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004219695.1;locus_tag=LI478_RS12055;product=hypothetical protein;protein_id=WP_023316880.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2471632 2471988 . - . ID=gene-LI478_RS12060;Name=LI478_RS12060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12060 NZ_CP085478.1 Protein Homology CDS 2471632 2471988 . - 0 ID=cds-WP_072143287.1;Parent=gene-LI478_RS12060;Dbxref=Genbank:WP_072143287.1;Name=WP_072143287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227031.1;locus_tag=LI478_RS12060;product=ASCH domain-containing protein;protein_id=WP_072143287.1;transl_table=11 NZ_CP085478.1 RefSeq pseudogene 2472142 2472333 . + . ID=gene-LI478_RS12065;Name=LI478_RS12065;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS12065;partial=true;pseudo=true;start_range=.,2472142 NZ_CP085478.1 Protein Homology CDS 2472142 2472333 . + 0 ID=cds-LI478_RS12065;Parent=gene-LI478_RS12065;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002905492.1;locus_tag=LI478_RS12065;partial=true;product=hypothetical protein;pseudo=true;start_range=.,2472142;transl_table=11 NZ_CP085478.1 RefSeq gene 2472337 2473611 . - . ID=gene-LI478_RS12070;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=LI478_RS12070 NZ_CP085478.1 Protein Homology CDS 2472337 2473611 . - 0 ID=cds-WP_021314387.1;Parent=gene-LI478_RS12070;Dbxref=Genbank:WP_021314387.1;Name=WP_021314387.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabF;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227028.1;locus_tag=LI478_RS12070;product=beta-ketoacyl-ACP synthase II;protein_id=WP_021314387.1;transl_table=11 NZ_CP085478.1 RefSeq pseudogene 2473631 2473806 . - . ID=gene-LI478_RS12075;Name=LI478_RS12075;end_range=2473806,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS12075;partial=true;pseudo=true NZ_CP085478.1 Protein Homology CDS 2473631 2473806 . - 0 ID=cds-LI478_RS12075;Parent=gene-LI478_RS12075;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2473806,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227027.1;locus_tag=LI478_RS12075;partial=true;product=EmrB/QacA family drug resistance transporter;pseudo=true;transl_table=11 NZ_CP085478.1 RefSeq gene 2473848 2474405 . - . ID=gene-LI478_RS12080;Name=LI478_RS12080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12080 NZ_CP085478.1 Protein Homology CDS 2473848 2474405 . - 0 ID=cds-WP_040226033.1;Parent=gene-LI478_RS12080;Dbxref=Genbank:WP_040226033.1;Name=WP_040226033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227025.1;locus_tag=LI478_RS12080;product=helix-turn-helix domain-containing protein;protein_id=WP_040226033.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2474402 2474524 . - . ID=gene-LI478_RS12085;Name=LI478_RS12085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12085 NZ_CP085478.1 Protein Homology CDS 2474402 2474524 . - 0 ID=cds-WP_032414960.1;Parent=gene-LI478_RS12085;Dbxref=Genbank:WP_032414960.1;Name=WP_032414960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227024.1;locus_tag=LI478_RS12085;product=hypothetical protein;protein_id=WP_032414960.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2474726 2475844 . + . ID=gene-LI478_RS12090;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=LI478_RS12090 NZ_CP085478.1 Protein Homology CDS 2474726 2475844 . + 0 ID=cds-WP_040226031.1;Parent=gene-LI478_RS12090;Dbxref=Genbank:WP_040226031.1;Name=WP_040226031.1;Ontology_term=GO:0009089,GO:0004073;gbkey=CDS;gene=asd;go_function=aspartate-semialdehyde dehydrogenase activity|0004073||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227023.1;locus_tag=LI478_RS12090;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_040226031.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2475882 2476304 . - . ID=gene-LI478_RS12095;Name=LI478_RS12095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12095 NZ_CP085478.1 Protein Homology CDS 2475882 2476304 . - 0 ID=cds-WP_004176111.1;Parent=gene-LI478_RS12095;Dbxref=Genbank:WP_004176111.1;Name=WP_004176111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227022.1;locus_tag=LI478_RS12095;product=GNAT family N-acetyltransferase;protein_id=WP_004176111.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2476390 2476776 . - . ID=gene-LI478_RS12100;Name=hpxZ;gbkey=Gene;gene=hpxZ;gene_biotype=protein_coding;locus_tag=LI478_RS12100 NZ_CP085478.1 Protein Homology CDS 2476390 2476776 . - 0 ID=cds-WP_002905421.1;Parent=gene-LI478_RS12100;Dbxref=Genbank:WP_002905421.1;Name=WP_002905421.1;gbkey=CDS;gene=hpxZ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227021.1;locus_tag=LI478_RS12100;product=oxalurate catabolism protein HpxZ;protein_id=WP_002905421.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2476773 2478170 . - . ID=gene-LI478_RS12105;Name=LI478_RS12105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12105 NZ_CP085478.1 Protein Homology CDS 2476773 2478170 . - 0 ID=cds-WP_040218176.1;Parent=gene-LI478_RS12105;Dbxref=Genbank:WP_040218176.1;Name=WP_040218176.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020805177.1;locus_tag=LI478_RS12105;product=AtzE family amidohydrolase;protein_id=WP_040218176.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2478167 2478352 . - . ID=gene-LI478_RS12110;Name=hpxX;gbkey=Gene;gene=hpxX;gene_biotype=protein_coding;locus_tag=LI478_RS12110 NZ_CP085478.1 Protein Homology CDS 2478167 2478352 . - 0 ID=cds-WP_064153707.1;Parent=gene-LI478_RS12110;Dbxref=Genbank:WP_064153707.1;Name=WP_064153707.1;gbkey=CDS;gene=hpxX;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227018.1;locus_tag=LI478_RS12110;product=oxalurate catabolism protein HpxX;protein_id=WP_064153707.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2478363 2479949 . - . ID=gene-LI478_RS12115;Name=hpxW;gbkey=Gene;gene=hpxW;gene_biotype=protein_coding;locus_tag=LI478_RS12115 NZ_CP085478.1 Protein Homology CDS 2478363 2479949 . - 0 ID=cds-WP_021314382.1;Parent=gene-LI478_RS12115;Dbxref=Genbank:WP_021314382.1;Name=WP_021314382.1;gbkey=CDS;gene=hpxW;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227017.1;locus_tag=LI478_RS12115;product=oxamate amidohydrolase;protein_id=WP_021314382.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2480129 2480968 . + . ID=gene-LI478_RS12120;Name=hpxU;gbkey=Gene;gene=hpxU;gene_biotype=protein_coding;locus_tag=LI478_RS12120 NZ_CP085478.1 Protein Homology CDS 2480129 2480968 . + 0 ID=cds-WP_004176115.1;Parent=gene-LI478_RS12120;Dbxref=Genbank:WP_004176115.1;Name=WP_004176115.1;gbkey=CDS;gene=hpxU;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227016.1;locus_tag=LI478_RS12120;product=MurR/RpiR family transcriptional regulator HpxU;protein_id=WP_004176115.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2481183 2481968 . + . ID=gene-LI478_RS12125;Name=LI478_RS12125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12125 NZ_CP085478.1 Protein Homology CDS 2481183 2481968 . + 0 ID=cds-WP_004143665.1;Parent=gene-LI478_RS12125;Dbxref=Genbank:WP_004143665.1;Name=WP_004143665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227015.1;locus_tag=LI478_RS12125;product=transporter substrate-binding domain-containing protein;protein_id=WP_004143665.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2481978 2482643 . + . ID=gene-LI478_RS12130;Name=LI478_RS12130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12130 NZ_CP085478.1 Protein Homology CDS 2481978 2482643 . + 0 ID=cds-WP_004176117.1;Parent=gene-LI478_RS12130;Dbxref=Genbank:WP_004176117.1;Name=WP_004176117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227014.1;locus_tag=LI478_RS12130;product=amino acid ABC transporter permease;protein_id=WP_004176117.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2482643 2483299 . + . ID=gene-LI478_RS12135;Name=LI478_RS12135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12135 NZ_CP085478.1 Protein Homology CDS 2482643 2483299 . + 0 ID=cds-WP_032418943.1;Parent=gene-LI478_RS12135;Dbxref=Genbank:WP_032418943.1;Name=WP_032418943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227013.1;locus_tag=LI478_RS12135;product=amino acid ABC transporter permease;protein_id=WP_032418943.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2483280 2484017 . + . ID=gene-LI478_RS12140;Name=LI478_RS12140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12140 NZ_CP085478.1 Protein Homology CDS 2483280 2484017 . + 0 ID=cds-WP_004143660.1;Parent=gene-LI478_RS12140;Dbxref=Genbank:WP_004143660.1;Name=WP_004143660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227012.1;locus_tag=LI478_RS12140;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_004143660.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2484033 2485274 . + . ID=gene-LI478_RS12145;Name=LI478_RS12145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12145 NZ_CP085478.1 Protein Homology CDS 2484033 2485274 . + 0 ID=cds-WP_004224900.1;Parent=gene-LI478_RS12145;Dbxref=Genbank:WP_004224900.1;Name=WP_004224900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227011.1;locus_tag=LI478_RS12145;product=alanine--glyoxylate aminotransferase family protein;protein_id=WP_004224900.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2485271 2486530 . + . ID=gene-LI478_RS12150;Name=hpxK;gbkey=Gene;gene=hpxK;gene_biotype=protein_coding;locus_tag=LI478_RS12150 NZ_CP085478.1 Protein Homology CDS 2485271 2486530 . + 0 ID=cds-WP_227394182.1;Parent=gene-LI478_RS12150;Dbxref=Genbank:WP_227394182.1;Name=WP_227394182.1;Ontology_term=GO:0016813;gbkey=CDS;gene=hpxK;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in linear amidines|0016813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227010.1;locus_tag=LI478_RS12150;product=allantoate amidohydrolase;protein_id=WP_227394182.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2486563 2487540 . - . ID=gene-LI478_RS12155;Name=LI478_RS12155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12155 NZ_CP085478.1 Protein Homology CDS 2486563 2487540 . - 0 ID=cds-WP_002905232.1;Parent=gene-LI478_RS12155;Dbxref=Genbank:WP_002905232.1;Name=WP_002905232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227009.1;locus_tag=LI478_RS12155;product=nitronate monooxygenase;protein_id=WP_002905232.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2487715 2488605 . + . ID=gene-LI478_RS12160;Name=LI478_RS12160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12160 NZ_CP085478.1 Protein Homology CDS 2487715 2488605 . + 0 ID=cds-WP_074184272.1;Parent=gene-LI478_RS12160;Dbxref=Genbank:WP_074184272.1;Name=WP_074184272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227008.1;locus_tag=LI478_RS12160;product=LysR family transcriptional regulator;protein_id=WP_074184272.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2488670 2489203 . + . ID=gene-LI478_RS12165;Name=LI478_RS12165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12165 NZ_CP085478.1 Protein Homology CDS 2488670 2489203 . + 0 ID=cds-WP_004179939.1;Parent=gene-LI478_RS12165;Dbxref=Genbank:WP_004179939.1;Name=WP_004179939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227007.1;locus_tag=LI478_RS12165;product=hypothetical protein;protein_id=WP_004179939.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2489437 2490537 . - . ID=gene-LI478_RS12170;Name=LI478_RS12170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12170 NZ_CP085478.1 Protein Homology CDS 2489437 2490537 . - 0 ID=cds-WP_040226024.1;Parent=gene-LI478_RS12170;Dbxref=Genbank:WP_040226024.1;Name=WP_040226024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019705118.1;locus_tag=LI478_RS12170;product=NADH:flavin oxidoreductase/NADH oxidase;protein_id=WP_040226024.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2490645 2492252 . - . ID=gene-LI478_RS12175;Name=LI478_RS12175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12175 NZ_CP085478.1 Protein Homology CDS 2490645 2492252 . - 0 ID=cds-WP_004176124.1;Parent=gene-LI478_RS12175;Dbxref=Genbank:WP_004176124.1;Name=WP_004176124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227004.1;locus_tag=LI478_RS12175;product=FAD-NAD(P)-binding protein;protein_id=WP_004176124.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2492528 2493760 . + . ID=gene-LI478_RS12180;Name=LI478_RS12180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12180 NZ_CP085478.1 Protein Homology CDS 2492528 2493760 . + 0 ID=cds-WP_002905221.1;Parent=gene-LI478_RS12180;Dbxref=Genbank:WP_002905221.1;Name=WP_002905221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227003.1;locus_tag=LI478_RS12180;product=MFS transporter;protein_id=WP_002905221.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2493801 2494715 . - . ID=gene-LI478_RS12185;Name=LI478_RS12185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12185 NZ_CP085478.1 Protein Homology CDS 2493801 2494715 . - 0 ID=cds-WP_004148410.1;Parent=gene-LI478_RS12185;Dbxref=Genbank:WP_004148410.1;Name=WP_004148410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019705116.1;locus_tag=LI478_RS12185;product=DMT family transporter;protein_id=WP_004148410.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2494917 2496017 . + . ID=gene-LI478_RS12190;Name=LI478_RS12190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12190 NZ_CP085478.1 Protein Homology CDS 2494917 2496017 . + 0 ID=cds-WP_004184110.1;Parent=gene-LI478_RS12190;Dbxref=Genbank:WP_004184110.1;Name=WP_004184110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227001.1;locus_tag=LI478_RS12190;product=iron-containing redox enzyme family protein;protein_id=WP_004184110.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2495993 2496571 . - . ID=gene-LI478_RS12195;Name=LI478_RS12195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12195 NZ_CP085478.1 Protein Homology CDS 2495993 2496571 . - 0 ID=cds-WP_032414952.1;Parent=gene-LI478_RS12195;Dbxref=Genbank:WP_032414952.1;Name=WP_032414952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227000.1;locus_tag=LI478_RS12195;product=TetR/AcrR family transcriptional regulator;protein_id=WP_032414952.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2496910 2497098 . + . ID=gene-LI478_RS12200;Name=LI478_RS12200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12200 NZ_CP085478.1 Protein Homology CDS 2496910 2497098 . + 0 ID=cds-WP_004148407.1;Parent=gene-LI478_RS12200;Dbxref=Genbank:WP_004148407.1;Name=WP_004148407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226999.1;locus_tag=LI478_RS12200;product=hypothetical protein;protein_id=WP_004148407.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2497169 2497747 . + . ID=gene-LI478_RS12205;Name=LI478_RS12205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12205 NZ_CP085478.1 Protein Homology CDS 2497169 2497747 . + 0 ID=cds-WP_074182352.1;Parent=gene-LI478_RS12205;Dbxref=Genbank:WP_074182352.1;Name=WP_074182352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226998.1;locus_tag=LI478_RS12205;product=GNAT family protein;protein_id=WP_074182352.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2497764 2498435 . - . ID=gene-LI478_RS12210;Name=LI478_RS12210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12210 NZ_CP085478.1 Protein Homology CDS 2497764 2498435 . - 0 ID=cds-WP_223176065.1;Parent=gene-LI478_RS12210;Dbxref=Genbank:WP_223176065.1;Name=WP_223176065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017456819.1;locus_tag=LI478_RS12210;product=hypothetical protein;protein_id=WP_223176065.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2498432 2500687 . - . ID=gene-LI478_RS12215;Name=LI478_RS12215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12215 NZ_CP085478.1 Protein Homology CDS 2498432 2500687 . - 0 ID=cds-WP_064277333.1;Parent=gene-LI478_RS12215;Dbxref=Genbank:WP_064277333.1;Name=WP_064277333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004190038.1;locus_tag=LI478_RS12215;product=hypothetical protein;protein_id=WP_064277333.1;transl_table=11 NZ_CP085478.1 RefSeq pseudogene 2500838 2500927 . + . ID=gene-LI478_RS12220;Name=LI478_RS12220;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS12220;partial=true;pseudo=true;start_range=.,2500838 NZ_CP085478.1 Protein Homology CDS 2500838 2500927 . + 0 ID=cds-LI478_RS12220;Parent=gene-LI478_RS12220;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226998.1;locus_tag=LI478_RS12220;partial=true;product=N-acetyltransferase;pseudo=true;start_range=.,2500838;transl_table=11 NZ_CP085478.1 RefSeq gene 2500965 2502263 . - . ID=gene-LI478_RS12225;Name=oxlT;gbkey=Gene;gene=oxlT;gene_biotype=protein_coding;locus_tag=LI478_RS12225 NZ_CP085478.1 Protein Homology CDS 2500965 2502263 . - 0 ID=cds-WP_074188179.1;Parent=gene-LI478_RS12225;Dbxref=Genbank:WP_074188179.1;Name=WP_074188179.1;Ontology_term=GO:0015297;gbkey=CDS;gene=oxlT;go_function=antiporter activity|0015297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226997.1;locus_tag=LI478_RS12225;product=oxalate/formate MFS antiporter;protein_id=WP_074188179.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2502480 2502698 . + . ID=gene-LI478_RS12230;Name=LI478_RS12230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12230 NZ_CP085478.1 Protein Homology CDS 2502480 2502698 . + 0 ID=cds-WP_074188185.1;Parent=gene-LI478_RS12230;Dbxref=Genbank:WP_074188185.1;Name=WP_074188185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226996.1;locus_tag=LI478_RS12230;product=hypothetical protein;protein_id=WP_074188185.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2502809 2503861 . - . ID=gene-LI478_RS12235;Name=LI478_RS12235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12235 NZ_CP085478.1 Protein Homology CDS 2502809 2503861 . - 0 ID=cds-WP_017880184.1;Parent=gene-LI478_RS12235;Dbxref=Genbank:WP_017880184.1;Name=WP_017880184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226995.1;locus_tag=LI478_RS12235;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_017880184.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2504078 2504515 . + . ID=gene-LI478_RS12240;Name=LI478_RS12240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12240 NZ_CP085478.1 Protein Homology CDS 2504078 2504515 . + 0 ID=cds-WP_004179927.1;Parent=gene-LI478_RS12240;Dbxref=Genbank:WP_004179927.1;Name=WP_004179927.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226994.1;locus_tag=LI478_RS12240;product=PTS sugar transporter subunit IIA;protein_id=WP_004179927.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2504527 2504793 . + . ID=gene-LI478_RS12245;Name=LI478_RS12245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12245 NZ_CP085478.1 Protein Homology CDS 2504527 2504793 . + 0 ID=cds-WP_004176134.1;Parent=gene-LI478_RS12245;Dbxref=Genbank:WP_004176134.1;Name=WP_004176134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226993.1;locus_tag=LI478_RS12245;product=PTS sugar transporter subunit IIB;protein_id=WP_004176134.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2504824 2506086 . + . ID=gene-LI478_RS12250;Name=LI478_RS12250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12250 NZ_CP085478.1 Protein Homology CDS 2504824 2506086 . + 0 ID=cds-WP_004176135.1;Parent=gene-LI478_RS12250;Dbxref=Genbank:WP_004176135.1;Name=WP_004176135.1;Ontology_term=GO:0009401;gbkey=CDS;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226992.1;locus_tag=LI478_RS12250;product=PTS ascorbate transporter subunit IIC;protein_id=WP_004176135.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2506107 2506787 . + . ID=gene-LI478_RS12255;Name=alsE;gbkey=Gene;gene=alsE;gene_biotype=protein_coding;locus_tag=LI478_RS12255 NZ_CP085478.1 Protein Homology CDS 2506107 2506787 . + 0 ID=cds-WP_004179925.1;Parent=gene-LI478_RS12255;Dbxref=Genbank:WP_004179925.1;Name=WP_004179925.1;gbkey=CDS;gene=alsE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226991.1;locus_tag=LI478_RS12255;product=D-allulose 6-phosphate 3-epimerase;protein_id=WP_004179925.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2506903 2507373 . + . ID=gene-LI478_RS12260;Name=LI478_RS12260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12260 NZ_CP085478.1 Protein Homology CDS 2506903 2507373 . + 0 ID=cds-WP_032414946.1;Parent=gene-LI478_RS12260;Dbxref=Genbank:WP_032414946.1;Name=WP_032414946.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226990.1;locus_tag=LI478_RS12260;product=PTS sugar transporter subunit IIA;protein_id=WP_032414946.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2507430 2507741 . + . ID=gene-LI478_RS12265;Name=LI478_RS12265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12265 NZ_CP085478.1 Protein Homology CDS 2507430 2507741 . + 0 ID=cds-WP_004176139.1;Parent=gene-LI478_RS12265;Dbxref=Genbank:WP_004176139.1;Name=WP_004176139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004184097.1;locus_tag=LI478_RS12265;product=PTS fructose transporter subunit IIB;protein_id=WP_004176139.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2507784 2508890 . + . ID=gene-LI478_RS12270;Name=LI478_RS12270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12270 NZ_CP085478.1 Protein Homology CDS 2507784 2508890 . + 0 ID=cds-WP_004224873.1;Parent=gene-LI478_RS12270;Dbxref=Genbank:WP_004224873.1;Name=WP_004224873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226988.1;locus_tag=LI478_RS12270;product=PTS fructose transporter subunit IIC;protein_id=WP_004224873.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2509096 2509716 . + . ID=gene-LI478_RS12275;Name=LI478_RS12275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12275 NZ_CP085478.1 Protein Homology CDS 2509096 2509716 . + 0 ID=cds-WP_023316872.1;Parent=gene-LI478_RS12275;Dbxref=Genbank:WP_023316872.1;Name=WP_023316872.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002905003.1;locus_tag=LI478_RS12275;product=LysE family translocator;protein_id=WP_023316872.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2509774 2510982 . - . ID=gene-LI478_RS12280;Name=LI478_RS12280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12280 NZ_CP085478.1 Protein Homology CDS 2509774 2510982 . - 0 ID=cds-WP_064153118.1;Parent=gene-LI478_RS12280;Dbxref=Genbank:WP_064153118.1;Name=WP_064153118.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226986.1;locus_tag=LI478_RS12280;product=MFS transporter;protein_id=WP_064153118.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2511086 2511988 . + . ID=gene-LI478_RS12285;Name=LI478_RS12285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12285 NZ_CP085478.1 Protein Homology CDS 2511086 2511988 . + 0 ID=cds-WP_004176143.1;Parent=gene-LI478_RS12285;Dbxref=Genbank:WP_004176143.1;Name=WP_004176143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226985.1;locus_tag=LI478_RS12285;product=LysR family transcriptional regulator;protein_id=WP_004176143.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2512030 2512917 . - . ID=gene-LI478_RS12290;Name=LI478_RS12290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12290 NZ_CP085478.1 Protein Homology CDS 2512030 2512917 . - 0 ID=cds-WP_021462539.1;Parent=gene-LI478_RS12290;Dbxref=Genbank:WP_021462539.1;Name=WP_021462539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226984.1;locus_tag=LI478_RS12290;product=LysR family transcriptional regulator;protein_id=WP_021462539.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2513078 2513872 . + . ID=gene-LI478_RS12295;Name=LI478_RS12295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12295 NZ_CP085478.1 Protein Homology CDS 2513078 2513872 . + 0 ID=cds-WP_004218740.1;Parent=gene-LI478_RS12295;Dbxref=Genbank:WP_004218740.1;Name=WP_004218740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226983.1;locus_tag=LI478_RS12295;product=N-acyl homoserine lactonase family protein;protein_id=WP_004218740.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2513977 2514405 . - . ID=gene-LI478_RS12300;Name=LI478_RS12300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12300 NZ_CP085478.1 Protein Homology CDS 2513977 2514405 . - 0 ID=cds-WP_004179900.1;Parent=gene-LI478_RS12300;Dbxref=Genbank:WP_004179900.1;Name=WP_004179900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226982.1;locus_tag=LI478_RS12300;product=cell envelope integrity protein TolA;protein_id=WP_004179900.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2514518 2515660 . - . ID=gene-LI478_RS12305;Name=LI478_RS12305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12305 NZ_CP085478.1 Protein Homology CDS 2514518 2515660 . - 0 ID=cds-WP_004199916.1;Parent=gene-LI478_RS12305;Dbxref=Genbank:WP_004199916.1;Name=WP_004199916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226981.1;locus_tag=LI478_RS12305;product=M20 family metallopeptidase;protein_id=WP_004199916.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2515660 2516415 . - . ID=gene-LI478_RS12310;Name=LI478_RS12310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12310 NZ_CP085478.1 Protein Homology CDS 2515660 2516415 . - 0 ID=cds-WP_002904983.1;Parent=gene-LI478_RS12310;Dbxref=Genbank:WP_002904983.1;Name=WP_002904983.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226980.1;locus_tag=LI478_RS12310;product=glutamine amidotransferase;protein_id=WP_002904983.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2516430 2517509 . - . ID=gene-LI478_RS12315;Name=LI478_RS12315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12315 NZ_CP085478.1 Protein Homology CDS 2516430 2517509 . - 0 ID=cds-WP_004176149.1;Parent=gene-LI478_RS12315;Dbxref=Genbank:WP_004176149.1;Name=WP_004176149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226979.1;locus_tag=LI478_RS12315;product=phosphotriesterase-related protein;protein_id=WP_004176149.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2517513 2518514 . - . ID=gene-LI478_RS12320;Name=LI478_RS12320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12320 NZ_CP085478.1 Protein Homology CDS 2517513 2518514 . - 0 ID=cds-WP_002904978.1;Parent=gene-LI478_RS12320;Dbxref=Genbank:WP_002904978.1;Name=WP_002904978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226978.1;locus_tag=LI478_RS12320;product=ABC transporter permease;protein_id=WP_002904978.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2518533 2519279 . - . ID=gene-LI478_RS12325;Name=LI478_RS12325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12325 NZ_CP085478.1 Protein Homology CDS 2518533 2519279 . - 0 ID=cds-WP_004198552.1;Parent=gene-LI478_RS12325;Dbxref=Genbank:WP_004198552.1;Name=WP_004198552.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226977.1;locus_tag=LI478_RS12325;product=ATP-binding cassette domain-containing protein;protein_id=WP_004198552.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2519660 2520682 . - . ID=gene-LI478_RS12330;Name=LI478_RS12330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12330 NZ_CP085478.1 Protein Homology CDS 2519660 2520682 . - 0 ID=cds-WP_032414938.1;Parent=gene-LI478_RS12330;Dbxref=Genbank:WP_032414938.1;Name=WP_032414938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226976.1;locus_tag=LI478_RS12330;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_032414938.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2521029 2521982 . + . ID=gene-LI478_RS12335;Name=LI478_RS12335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12335 NZ_CP085478.1 Protein Homology CDS 2521029 2521982 . + 0 ID=cds-WP_004176159.1;Parent=gene-LI478_RS12335;Dbxref=Genbank:WP_004176159.1;Name=WP_004176159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226974.1;locus_tag=LI478_RS12335;product=substrate-binding domain-containing protein;protein_id=WP_004176159.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2521984 2522856 . - . ID=gene-LI478_RS12340;Name=LI478_RS12340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12340 NZ_CP085478.1 Protein Homology CDS 2521984 2522856 . - 0 ID=cds-WP_004179897.1;Parent=gene-LI478_RS12340;Dbxref=Genbank:WP_004179897.1;Name=WP_004179897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226973.1;locus_tag=LI478_RS12340;product=PfkB family carbohydrate kinase;protein_id=WP_004179897.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2522883 2523728 . + . ID=gene-LI478_RS12345;Name=LI478_RS12345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12345 NZ_CP085478.1 Protein Homology CDS 2522883 2523728 . + 0 ID=cds-WP_004176161.1;Parent=gene-LI478_RS12345;Dbxref=Genbank:WP_004176161.1;Name=WP_004176161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226972.1;locus_tag=LI478_RS12345;product=BtpA/SgcQ family protein;protein_id=WP_004176161.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2523728 2524372 . + . ID=gene-LI478_RS12350;Name=LI478_RS12350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12350 NZ_CP085478.1 Protein Homology CDS 2523728 2524372 . + 0 ID=cds-WP_004199912.1;Parent=gene-LI478_RS12350;Dbxref=Genbank:WP_004199912.1;Name=WP_004199912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226971.1;locus_tag=LI478_RS12350;product=TenA family protein;protein_id=WP_004199912.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2524425 2525297 . - . ID=gene-LI478_RS12355;Name=LI478_RS12355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12355 NZ_CP085478.1 Protein Homology CDS 2524425 2525297 . - 0 ID=cds-WP_023316868.1;Parent=gene-LI478_RS12355;Dbxref=Genbank:WP_023316868.1;Name=WP_023316868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002904909.1;locus_tag=LI478_RS12355;product=alpha/beta fold hydrolase;protein_id=WP_023316868.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2525752 2526201 . + . ID=gene-LI478_RS12360;Name=lysM;gbkey=Gene;gene=lysM;gene_biotype=protein_coding;locus_tag=LI478_RS12360 NZ_CP085478.1 Protein Homology CDS 2525752 2526201 . + 0 ID=cds-WP_002904908.1;Parent=gene-LI478_RS12360;Dbxref=Genbank:WP_002904908.1;Name=WP_002904908.1;gbkey=CDS;gene=lysM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226969.1;locus_tag=LI478_RS12360;product=peptidoglycan-binding protein LysM;protein_id=WP_002904908.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2526338 2527729 . - . ID=gene-LI478_RS12365;Name=pgtP;gbkey=Gene;gene=pgtP;gene_biotype=protein_coding;locus_tag=LI478_RS12365 NZ_CP085478.1 Protein Homology CDS 2526338 2527729 . - 0 ID=cds-WP_023282591.1;Parent=gene-LI478_RS12365;Dbxref=Genbank:WP_023282591.1;Name=WP_023282591.1;gbkey=CDS;gene=pgtP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004205872.1;locus_tag=LI478_RS12365;product=phosphoglycerate transporter PgtP;protein_id=WP_023282591.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2528153 2529373 . + . ID=gene-LI478_RS12370;Name=pgtC;gbkey=Gene;gene=pgtC;gene_biotype=protein_coding;locus_tag=LI478_RS12370 NZ_CP085478.1 Protein Homology CDS 2528153 2529373 . + 0 ID=cds-WP_102007250.1;Parent=gene-LI478_RS12370;Dbxref=Genbank:WP_102007250.1;Name=WP_102007250.1;gbkey=CDS;gene=pgtC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226964.1;locus_tag=LI478_RS12370;product=phosphoglycerate transport regulator PgtC;protein_id=WP_102007250.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2529385 2531379 . + . ID=gene-LI478_RS12375;Name=pgtB;gbkey=Gene;gene=pgtB;gene_biotype=protein_coding;locus_tag=LI478_RS12375 NZ_CP085478.1 Protein Homology CDS 2529385 2531379 . + 0 ID=cds-WP_004184082.1;Parent=gene-LI478_RS12375;Dbxref=Genbank:WP_004184082.1;Name=WP_004184082.1;gbkey=CDS;gene=pgtB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226963.1;locus_tag=LI478_RS12375;product=two-component system sensor histidine kinase PgtB;protein_id=WP_004184082.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2531369 2532619 . + . ID=gene-LI478_RS12380;Name=pgtA;gbkey=Gene;gene=pgtA;gene_biotype=protein_coding;locus_tag=LI478_RS12380 NZ_CP085478.1 Protein Homology CDS 2531369 2532619 . + 0 ID=cds-WP_002904899.1;Parent=gene-LI478_RS12380;Dbxref=Genbank:WP_002904899.1;Name=WP_002904899.1;gbkey=CDS;gene=pgtA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226962.1;locus_tag=LI478_RS12380;product=two-component system response regulator PgtA;protein_id=WP_002904899.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2532747 2533265 . + . ID=gene-LI478_RS12385;Name=LI478_RS12385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12385 NZ_CP085478.1 Protein Homology CDS 2532747 2533265 . + 0 ID=cds-WP_004176166.1;Parent=gene-LI478_RS12385;Dbxref=Genbank:WP_004176166.1;Name=WP_004176166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226961.1;locus_tag=LI478_RS12385;product=GrpB family protein;protein_id=WP_004176166.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2533447 2534355 . - . ID=gene-LI478_RS12390;Name=LI478_RS12390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12390 NZ_CP085478.1 Protein Homology CDS 2533447 2534355 . - 0 ID=cds-WP_002904893.1;Parent=gene-LI478_RS12390;Dbxref=Genbank:WP_002904893.1;Name=WP_002904893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226960.1;locus_tag=LI478_RS12390;product=LysR family transcriptional regulator;protein_id=WP_002904893.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2534572 2535558 . + . ID=gene-LI478_RS12395;Name=LI478_RS12395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12395 NZ_CP085478.1 Protein Homology CDS 2534572 2535558 . + 0 ID=cds-WP_032438398.1;Parent=gene-LI478_RS12395;Dbxref=Genbank:WP_032438398.1;Name=WP_032438398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226959.1;locus_tag=LI478_RS12395;product=aldo/keto reductase;protein_id=WP_032438398.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2535605 2536786 . + . ID=gene-LI478_RS12400;Name=LI478_RS12400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12400 NZ_CP085478.1 Protein Homology CDS 2535605 2536786 . + 0 ID=cds-WP_004891956.1;Parent=gene-LI478_RS12400;Dbxref=Genbank:WP_004891956.1;Name=WP_004891956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020316791.1;locus_tag=LI478_RS12400;product=aldo/keto reductase;protein_id=WP_004891956.1;transl_table=11 NZ_CP085478.1 RefSeq pseudogene 2536852 2537559 . + . ID=gene-LI478_RS12405;Name=LI478_RS12405;end_range=2537559,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS12405;partial=true;pseudo=true NZ_CP085478.1 Protein Homology CDS 2536852 2537559 . + 0 ID=cds-LI478_RS12405;Parent=gene-LI478_RS12405;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2537559,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019705089.1;locus_tag=LI478_RS12405;partial=true;product=SMP-30/gluconolactonase/LRE family protein;pseudo=true;transl_table=11 NZ_CP085478.1 RefSeq pseudogene 2537558 2538286 . - . ID=gene-LI478_RS12410;Name=LI478_RS12410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS12410;partial=true;pseudo=true;start_range=.,2537558 NZ_CP085478.1 Protein Homology CDS 2537558 2538286 . - 0 ID=cds-LI478_RS12410;Parent=gene-LI478_RS12410;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226955.1;locus_tag=LI478_RS12410;partial=true;product=aldo/keto reductase;pseudo=true;start_range=.,2537558;transl_table=11 NZ_CP085478.1 RefSeq gene 2538504 2538608 . - . ID=gene-LI478_RS12415;Name=LI478_RS12415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12415 NZ_CP085478.1 Protein Homology CDS 2538504 2538608 . - 0 ID=cds-WP_077257447.1;Parent=gene-LI478_RS12415;Dbxref=Genbank:WP_077257447.1;Name=WP_077257447.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024776.2;locus_tag=LI478_RS12415;product=helix-turn-helix domain-containing protein;protein_id=WP_077257447.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2538573 2538692 . + . ID=gene-LI478_RS12420;Name=LI478_RS12420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12420 NZ_CP085478.1 Protein Homology CDS 2538573 2538692 . + 0 ID=cds-WP_223168828.1;Parent=gene-LI478_RS12420;Dbxref=Genbank:WP_223168828.1;Name=WP_223168828.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226954.1;locus_tag=LI478_RS12420;product=hypothetical protein;protein_id=WP_223168828.1;transl_table=11 NZ_CP085478.1 RefSeq pseudogene 2538973 2539332 . - . ID=gene-LI478_RS12425;Name=LI478_RS12425;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS12425;partial=true;pseudo=true;start_range=.,2538973 NZ_CP085478.1 Protein Homology CDS 2538973 2539332 . - 0 ID=cds-LI478_RS12425;Parent=gene-LI478_RS12425;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001441238.1;locus_tag=LI478_RS12425;partial=true;product=nuclease-related domain-containing protein;pseudo=true;start_range=.,2538973;transl_table=11 NZ_CP085478.1 RefSeq gene 2539617 2540237 . - . ID=gene-LI478_RS12430;Name=LI478_RS12430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12430 NZ_CP085478.1 Protein Homology CDS 2539617 2540237 . - 0 ID=cds-WP_223175340.1;Parent=gene-LI478_RS12430;Dbxref=Genbank:WP_223175340.1;Name=WP_223175340.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015431.2;locus_tag=LI478_RS12430;product=LysR family transcriptional regulator;protein_id=WP_223175340.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2540469 2543012 . + . ID=gene-LI478_RS12435;Name=LI478_RS12435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12435 NZ_CP085478.1 Protein Homology CDS 2540469 2543012 . + 0 ID=cds-WP_064277338.1;Parent=gene-LI478_RS12435;Dbxref=Genbank:WP_064277338.1;Name=WP_064277338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009093219.1;locus_tag=LI478_RS12435;product=excinuclease ABC subunit UvrA;protein_id=WP_064277338.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2543048 2543635 . + . ID=gene-LI478_RS12440;Name=LI478_RS12440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12440 NZ_CP085478.1 Protein Homology CDS 2543048 2543635 . + 0 ID=cds-WP_032414932.1;Parent=gene-LI478_RS12440;Dbxref=Genbank:WP_032414932.1;Name=WP_032414932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004224821.1;locus_tag=LI478_RS12440;product=alpha-ketoglutarate-dependent dioxygenase AlkB;protein_id=WP_032414932.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2543650 2544528 . - . ID=gene-LI478_RS12445;Name=LI478_RS12445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12445 NZ_CP085478.1 Protein Homology CDS 2543650 2544528 . - 0 ID=cds-WP_032414930.1;Parent=gene-LI478_RS12445;Dbxref=Genbank:WP_032414930.1;Name=WP_032414930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004224815.1;locus_tag=LI478_RS12445;product=LysR family transcriptional regulator;protein_id=WP_032414930.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2544823 2545179 . + . ID=gene-LI478_RS12450;Name=LI478_RS12450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12450 NZ_CP085478.1 Protein Homology CDS 2544823 2545179 . + 0 ID=cds-WP_032414929.1;Parent=gene-LI478_RS12450;Dbxref=Genbank:WP_032414929.1;Name=WP_032414929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004224813.1;locus_tag=LI478_RS12450;product=MmcQ/YjbR family DNA-binding protein;protein_id=WP_032414929.1;transl_table=11 NZ_CP085478.1 RefSeq pseudogene 2545532 2545755 . - . ID=gene-LI478_RS12460;Name=LI478_RS12460;end_range=2545755,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS12460;partial=true;pseudo=true;start_range=.,2545532 NZ_CP085478.1 Protein Homology CDS 2545532 2545755 . - 0 ID=cds-LI478_RS12460;Parent=gene-LI478_RS12460;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=2545755,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226946.1;locus_tag=LI478_RS12460;partial=true;product=DeoR/GlpR transcriptional regulator;pseudo=true;start_range=.,2545532;transl_table=11 NZ_CP085478.1 RefSeq pseudogene 2545751 2545897 . + . ID=gene-LI478_RS12465;Name=LI478_RS12465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS12465;partial=true;pseudo=true;start_range=.,2545751 NZ_CP085478.1 Protein Homology CDS 2545751 2545897 . + 0 ID=cds-LI478_RS12465;Parent=gene-LI478_RS12465;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226938.1;locus_tag=LI478_RS12465;partial=true;product=VOC family protein;pseudo=true;start_range=.,2545751;transl_table=11 NZ_CP085478.1 RefSeq gene 2546146 2547702 . + . ID=gene-LI478_RS12470;Name=LI478_RS12470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12470 NZ_CP085478.1 Protein Homology CDS 2546146 2547702 . + 0 ID=cds-WP_002904845.1;Parent=gene-LI478_RS12470;Dbxref=Genbank:WP_002904845.1;Name=WP_002904845.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012711.2;locus_tag=LI478_RS12470;product=class I adenylate-forming enzyme family protein;protein_id=WP_002904845.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2547699 2549291 . + . ID=gene-LI478_RS12475;Name=LI478_RS12475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12475 NZ_CP085478.1 Protein Homology CDS 2547699 2549291 . + 0 ID=cds-WP_032414927.1;Parent=gene-LI478_RS12475;Dbxref=Genbank:WP_032414927.1;Name=WP_032414927.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226936.1;locus_tag=LI478_RS12475;product=CoA-transferase;protein_id=WP_032414927.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2549303 2550037 . + . ID=gene-LI478_RS12480;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=LI478_RS12480 NZ_CP085478.1 Protein Homology CDS 2549303 2550037 . + 0 ID=cds-WP_002904841.1;Parent=gene-LI478_RS12480;Dbxref=Genbank:WP_002904841.1;Name=WP_002904841.1;Ontology_term=GO:0006633,GO:0004316,GO:0051287;gbkey=CDS;gene=fabG;go_function=3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity|0004316||IEA,NAD binding|0051287||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226935.1;locus_tag=LI478_RS12480;product=3-oxoacyl-ACP reductase FabG;protein_id=WP_002904841.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2550049 2551239 . + . ID=gene-LI478_RS12485;Name=LI478_RS12485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12485 NZ_CP085478.1 Protein Homology CDS 2550049 2551239 . + 0 ID=cds-WP_032414926.1;Parent=gene-LI478_RS12485;Dbxref=Genbank:WP_032414926.1;Name=WP_032414926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226934.1;locus_tag=LI478_RS12485;product=thiolase family protein;protein_id=WP_032414926.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2551375 2552712 . + . ID=gene-LI478_RS12490;Name=LI478_RS12490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12490 NZ_CP085478.1 Protein Homology CDS 2551375 2552712 . + 0 ID=cds-WP_032414925.1;Parent=gene-LI478_RS12490;Dbxref=Genbank:WP_032414925.1;Name=WP_032414925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016946371.1;locus_tag=LI478_RS12490;product=MFS transporter;protein_id=WP_032414925.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2552726 2553604 . + . ID=gene-LI478_RS12495;Name=LI478_RS12495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12495 NZ_CP085478.1 Protein Homology CDS 2552726 2553604 . + 0 ID=cds-WP_009308862.1;Parent=gene-LI478_RS12495;Dbxref=Genbank:WP_009308862.1;Name=WP_009308862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226931.1;locus_tag=LI478_RS12495;product=SMP-30/gluconolactonase/LRE family protein;protein_id=WP_009308862.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2553681 2555051 . + . ID=gene-LI478_RS12500;Name=LI478_RS12500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12500 NZ_CP085478.1 Protein Homology CDS 2553681 2555051 . + 0 ID=cds-WP_004176181.1;Parent=gene-LI478_RS12500;Dbxref=Genbank:WP_004176181.1;Name=WP_004176181.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226930.1;locus_tag=LI478_RS12500;product=MFS transporter;protein_id=WP_004176181.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2555065 2556240 . + . ID=gene-LI478_RS12505;Name=LI478_RS12505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12505 NZ_CP085478.1 Protein Homology CDS 2555065 2556240 . + 0 ID=cds-WP_015958409.1;Parent=gene-LI478_RS12505;Dbxref=Genbank:WP_015958409.1;Name=WP_015958409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226929.1;locus_tag=LI478_RS12505;product=glycerate kinase;protein_id=WP_015958409.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2556237 2557394 . + . ID=gene-LI478_RS12510;Name=LI478_RS12510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12510 NZ_CP085478.1 Protein Homology CDS 2556237 2557394 . + 0 ID=cds-WP_032414921.1;Parent=gene-LI478_RS12510;Dbxref=Genbank:WP_032414921.1;Name=WP_032414921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226928.1;locus_tag=LI478_RS12510;product=helix-turn-helix domain-containing protein;protein_id=WP_032414921.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2557477 2558352 . - . ID=gene-LI478_RS12515;Name=LI478_RS12515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12515 NZ_CP085478.1 Protein Homology CDS 2557477 2558352 . - 0 ID=cds-WP_002904832.1;Parent=gene-LI478_RS12515;Dbxref=Genbank:WP_002904832.1;Name=WP_002904832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226927.1;locus_tag=LI478_RS12515;product=NAD(P)-dependent oxidoreductase;protein_id=WP_002904832.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2558464 2559348 . - . ID=gene-LI478_RS12520;Name=LI478_RS12520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12520 NZ_CP085478.1 Protein Homology CDS 2558464 2559348 . - 0 ID=cds-WP_004190135.1;Parent=gene-LI478_RS12520;Dbxref=Genbank:WP_004190135.1;Name=WP_004190135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226926.1;locus_tag=LI478_RS12520;product=LysR family transcriptional regulator;protein_id=WP_004190135.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2559460 2560203 . + . ID=gene-LI478_RS12525;Name=LI478_RS12525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12525 NZ_CP085478.1 Protein Homology CDS 2559460 2560203 . + 0 ID=cds-WP_004190138.1;Parent=gene-LI478_RS12525;Dbxref=Genbank:WP_004190138.1;Name=WP_004190138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226925.1;locus_tag=LI478_RS12525;product=sulfite exporter TauE/SafE family protein;protein_id=WP_004190138.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2560209 2560907 . - . ID=gene-LI478_RS12530;Name=LI478_RS12530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12530 NZ_CP085478.1 Protein Homology CDS 2560209 2560907 . - 0 ID=cds-WP_002904825.1;Parent=gene-LI478_RS12530;Dbxref=Genbank:WP_002904825.1;Name=WP_002904825.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226924.1;locus_tag=LI478_RS12530;product=GntR family transcriptional regulator;protein_id=WP_002904825.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2561175 2562707 . + . ID=gene-LI478_RS12535;Name=LI478_RS12535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12535 NZ_CP085478.1 Protein Homology CDS 2561175 2562707 . + 0 ID=cds-WP_032414919.1;Parent=gene-LI478_RS12535;Dbxref=Genbank:WP_032414919.1;Name=WP_032414919.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226923.1;locus_tag=LI478_RS12535;product=PTS transporter subunit EIIC;protein_id=WP_032414919.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2562719 2564047 . + . ID=gene-LI478_RS12540;Name=LI478_RS12540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12540 NZ_CP085478.1 Protein Homology CDS 2562719 2564047 . + 0 ID=cds-WP_004151635.1;Parent=gene-LI478_RS12540;Dbxref=Genbank:WP_004151635.1;Name=WP_004151635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226922.1;locus_tag=LI478_RS12540;product=6-phospho-alpha-glucosidase;protein_id=WP_004151635.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2564793 2566238 . + . ID=gene-LI478_RS12545;Name=LI478_RS12545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12545 NZ_CP085478.1 Protein Homology CDS 2564793 2566238 . + 0 ID=cds-WP_004143440.1;Parent=gene-LI478_RS12545;Dbxref=Genbank:WP_004143440.1;Name=WP_004143440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226920.1;locus_tag=LI478_RS12545;product=sugar porter family MFS transporter;protein_id=WP_004143440.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2566228 2566671 . + . ID=gene-LI478_RS12550;Name=LI478_RS12550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12550 NZ_CP085478.1 Protein Homology CDS 2566228 2566671 . + 0 ID=cds-WP_002904819.1;Parent=gene-LI478_RS12550;Dbxref=Genbank:WP_002904819.1;Name=WP_002904819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226919.1;locus_tag=LI478_RS12550;product=PTS sugar transporter subunit IIA;protein_id=WP_002904819.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2567088 2567327 . + . ID=gene-LI478_RS12555;Name=LI478_RS12555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12555 NZ_CP085478.1 Protein Homology CDS 2567088 2567327 . + 0 ID=cds-WP_002904816.1;Parent=gene-LI478_RS12555;Dbxref=Genbank:WP_002904816.1;Name=WP_002904816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226917.1;locus_tag=LI478_RS12555;product=hypothetical protein;protein_id=WP_002904816.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2567352 2567492 . + . ID=gene-LI478_RS12560;Name=LI478_RS12560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12560 NZ_CP085478.1 Protein Homology CDS 2567352 2567492 . + 0 ID=cds-WP_002904814.1;Parent=gene-LI478_RS12560;Dbxref=Genbank:WP_002904814.1;Name=WP_002904814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226916.1;locus_tag=LI478_RS12560;product=hypothetical protein;protein_id=WP_002904814.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2567679 2568614 . + . ID=gene-LI478_RS12565;Name=iroE;gbkey=Gene;gene=iroE;gene_biotype=protein_coding;locus_tag=LI478_RS12565 NZ_CP085478.1 Protein Homology CDS 2567679 2568614 . + 0 ID=cds-WP_004148380.1;Parent=gene-LI478_RS12565;Dbxref=Genbank:WP_004148380.1;Name=WP_004148380.1;gbkey=CDS;gene=iroE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004190148.1;locus_tag=LI478_RS12565;product=siderophore esterase IroE;protein_id=WP_004148380.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2568648 2570303 . - . ID=gene-LI478_RS12570;Name=LI478_RS12570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12570 NZ_CP085478.1 Protein Homology CDS 2568648 2570303 . - 0 ID=cds-WP_032414917.1;Parent=gene-LI478_RS12570;Dbxref=Genbank:WP_032414917.1;Name=WP_032414917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226913.1;locus_tag=LI478_RS12570;product=EAL domain-containing protein;protein_id=WP_032414917.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2570600 2570848 . + . ID=gene-LI478_RS12575;Name=LI478_RS12575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12575 NZ_CP085478.1 Protein Homology CDS 2570600 2570848 . + 0 ID=cds-WP_002904810.1;Parent=gene-LI478_RS12575;Dbxref=Genbank:WP_002904810.1;Name=WP_002904810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226912.1;locus_tag=LI478_RS12575;product=hypothetical protein;protein_id=WP_002904810.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2571138 2571356 . + . ID=gene-LI478_RS12580;Name=LI478_RS12580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12580 NZ_CP085478.1 Protein Homology CDS 2571138 2571356 . + 0 ID=cds-WP_002904808.1;Parent=gene-LI478_RS12580;Dbxref=Genbank:WP_002904808.1;Name=WP_002904808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226911.1;locus_tag=LI478_RS12580;product=ParD-like family protein;protein_id=WP_002904808.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2571337 2572119 . + . ID=gene-LI478_RS12585;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=LI478_RS12585 NZ_CP085478.1 Protein Homology CDS 2571337 2572119 . + 0 ID=cds-WP_004179825.1;Parent=gene-LI478_RS12585;Dbxref=Genbank:WP_004179825.1;Name=WP_004179825.1;Ontology_term=GO:0036211;gbkey=CDS;gene=map;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226910.1;locus_tag=LI478_RS12585;product=type I methionyl aminopeptidase;protein_id=WP_004179825.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2572346 2572633 . - . ID=gene-LI478_RS12590;Name=LI478_RS12590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12590 NZ_CP085478.1 GeneMarkS-2+ CDS 2572346 2572633 . - 0 ID=cds-WP_032414916.1;Parent=gene-LI478_RS12590;Dbxref=Genbank:WP_032414916.1;Name=WP_032414916.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LI478_RS12590;product=hypothetical protein;protein_id=WP_032414916.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2573077 2573640 . + . ID=gene-LI478_RS12595;Name=LI478_RS12595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12595 NZ_CP085478.1 Protein Homology CDS 2573077 2573640 . + 0 ID=cds-WP_004143457.1;Parent=gene-LI478_RS12595;Dbxref=Genbank:WP_004143457.1;Name=WP_004143457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226908.1;locus_tag=LI478_RS12595;product=fimbrial protein;protein_id=WP_004143457.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2573718 2574413 . + . ID=gene-LI478_RS12600;Name=LI478_RS12600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12600 NZ_CP085478.1 Protein Homology CDS 2573718 2574413 . + 0 ID=cds-WP_102007247.1;Parent=gene-LI478_RS12600;Dbxref=Genbank:WP_102007247.1;Name=WP_102007247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226907.1;locus_tag=LI478_RS12600;product=molecular chaperone;protein_id=WP_102007247.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2574429 2576930 . + . ID=gene-LI478_RS12605;Name=LI478_RS12605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12605 NZ_CP085478.1 Protein Homology CDS 2574429 2576930 . + 0 ID=cds-WP_064153112.1;Parent=gene-LI478_RS12605;Dbxref=Genbank:WP_064153112.1;Name=WP_064153112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226906.1;locus_tag=LI478_RS12605;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_064153112.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2576918 2577922 . + . ID=gene-LI478_RS12610;Name=LI478_RS12610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12610 NZ_CP085478.1 Protein Homology CDS 2576918 2577922 . + 0 ID=cds-WP_004176196.1;Parent=gene-LI478_RS12610;Dbxref=Genbank:WP_004176196.1;Name=WP_004176196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002904798.1;locus_tag=LI478_RS12610;product=fimbrial protein;protein_id=WP_004176196.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2578064 2579356 . + . ID=gene-LI478_RS12615;Name=LI478_RS12615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12615 NZ_CP085478.1 Protein Homology CDS 2578064 2579356 . + 0 ID=cds-WP_032414911.1;Parent=gene-LI478_RS12615;Dbxref=Genbank:WP_032414911.1;Name=WP_032414911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226903.1;locus_tag=LI478_RS12615;product=glycoside hydrolase family 10 protein;protein_id=WP_032414911.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2579373 2580695 . - . ID=gene-LI478_RS12620;Name=LI478_RS12620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12620 NZ_CP085478.1 Protein Homology CDS 2579373 2580695 . - 0 ID=cds-WP_023316847.1;Parent=gene-LI478_RS12620;Dbxref=Genbank:WP_023316847.1;Name=WP_023316847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226902.1;locus_tag=LI478_RS12620;product=type II toxin-antitoxin system HipA family toxin;protein_id=WP_023316847.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2580695 2580961 . - . ID=gene-LI478_RS12625;Name=hipB;gbkey=Gene;gene=hipB;gene_biotype=protein_coding;locus_tag=LI478_RS12625 NZ_CP085478.1 Protein Homology CDS 2580695 2580961 . - 0 ID=cds-WP_004176198.1;Parent=gene-LI478_RS12625;Dbxref=Genbank:WP_004176198.1;Name=WP_004176198.1;gbkey=CDS;gene=hipB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226901.1;locus_tag=LI478_RS12625;product=type II toxin-antitoxin system antitoxin HipB;protein_id=WP_004176198.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2581348 2581674 . - . ID=gene-LI478_RS12630;Name=uraH;gbkey=Gene;gene=uraH;gene_biotype=protein_coding;locus_tag=LI478_RS12630 NZ_CP085478.1 Protein Homology CDS 2581348 2581674 . - 0 ID=cds-WP_004224757.1;Parent=gene-LI478_RS12630;Dbxref=Genbank:WP_004224757.1;Name=WP_004224757.1;Ontology_term=GO:0019628;gbkey=CDS;gene=uraH;go_process=urate catabolic process|0019628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226900.1;locus_tag=LI478_RS12630;product=hydroxyisourate hydrolase;protein_id=WP_004224757.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2581671 2582171 . - . ID=gene-LI478_RS12635;Name=uraD;gbkey=Gene;gene=uraD;gene_biotype=protein_coding;locus_tag=LI478_RS12635 NZ_CP085478.1 Protein Homology CDS 2581671 2582171 . - 0 ID=cds-WP_004224756.1;Parent=gene-LI478_RS12635;Dbxref=Genbank:WP_004224756.1;Name=WP_004224756.1;Ontology_term=GO:0019628;gbkey=CDS;gene=uraD;go_process=urate catabolic process|0019628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226899.1;locus_tag=LI478_RS12635;product=2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase;protein_id=WP_004224756.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2582149 2583528 . - . ID=gene-LI478_RS12640;Name=LI478_RS12640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12640 NZ_CP085478.1 Protein Homology CDS 2582149 2583528 . - 0 ID=cds-WP_004184021.1;Parent=gene-LI478_RS12640;Dbxref=Genbank:WP_004184021.1;Name=WP_004184021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226898.1;locus_tag=LI478_RS12640;product=nucleobase:cation symporter-2 family protein;protein_id=WP_004184021.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2583874 2585028 . + . ID=gene-LI478_RS12645;Name=hpxO;gbkey=Gene;gene=hpxO;gene_biotype=protein_coding;locus_tag=LI478_RS12645 NZ_CP085478.1 Protein Homology CDS 2583874 2585028 . + 0 ID=cds-WP_002904783.1;Parent=gene-LI478_RS12645;Dbxref=Genbank:WP_002904783.1;Name=WP_002904783.1;Ontology_term=GO:0071949;gbkey=CDS;gene=hpxO;go_function=FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226897.1;locus_tag=LI478_RS12645;product=FAD-dependent urate hydroxylase HpxO;protein_id=WP_002904783.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2585009 2585932 . - . ID=gene-LI478_RS12650;Name=hpxR;gbkey=Gene;gene=hpxR;gene_biotype=protein_coding;locus_tag=LI478_RS12650 NZ_CP085478.1 Protein Homology CDS 2585009 2585932 . - 0 ID=cds-WP_004184020.1;Parent=gene-LI478_RS12650;Dbxref=Genbank:WP_004184020.1;Name=WP_004184020.1;gbkey=CDS;gene=hpxR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226896.1;locus_tag=LI478_RS12650;product=LysR family hpxDE operon transcriptional regulator HpxR;protein_id=WP_004184020.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2586058 2587095 . + . ID=gene-LI478_RS12655;Name=hpxD;gbkey=Gene;gene=hpxD;gene_biotype=protein_coding;locus_tag=LI478_RS12655 NZ_CP085478.1 Protein Homology CDS 2586058 2587095 . + 0 ID=cds-WP_064153110.1;Parent=gene-LI478_RS12655;Dbxref=Genbank:WP_064153110.1;Name=WP_064153110.1;gbkey=CDS;gene=hpxD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226895.1;locus_tag=LI478_RS12655;product=molybdenum cofactor-independent xanthine hydroxylase subunit HpxD;protein_id=WP_064153110.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2587107 2588081 . + . ID=gene-LI478_RS12660;Name=hpxE;gbkey=Gene;gene=hpxE;gene_biotype=protein_coding;locus_tag=LI478_RS12660 NZ_CP085478.1 Protein Homology CDS 2587107 2588081 . + 0 ID=cds-WP_064153109.1;Parent=gene-LI478_RS12660;Dbxref=Genbank:WP_064153109.1;Name=WP_064153109.1;gbkey=CDS;gene=hpxE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226894.1;locus_tag=LI478_RS12660;product=molybdenum cofactor-independent xanthine hydroxylase subunit HpxE;protein_id=WP_064153109.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2588058 2589296 . - . ID=gene-LI478_RS12665;Name=LI478_RS12665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12665 NZ_CP085478.1 Protein Homology CDS 2588058 2589296 . - 0 ID=cds-WP_032414904.1;Parent=gene-LI478_RS12665;Dbxref=Genbank:WP_032414904.1;Name=WP_032414904.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226893.1;locus_tag=LI478_RS12665;product=MFS transporter;protein_id=WP_032414904.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2589402 2590346 . + . ID=gene-LI478_RS12670;Name=LI478_RS12670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12670 NZ_CP085478.1 Protein Homology CDS 2589402 2590346 . + 0 ID=cds-WP_004190181.1;Parent=gene-LI478_RS12670;Dbxref=Genbank:WP_004190181.1;Name=WP_004190181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226892.1;locus_tag=LI478_RS12670;product=AraC family transcriptional regulator;protein_id=WP_004190181.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2590356 2591111 . - . ID=gene-LI478_RS12675;Name=LI478_RS12675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12675 NZ_CP085478.1 Protein Homology CDS 2590356 2591111 . - 0 ID=cds-WP_032414902.1;Parent=gene-LI478_RS12675;Dbxref=Genbank:WP_032414902.1;Name=WP_032414902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226891.1;locus_tag=LI478_RS12675;product=VOC family protein;protein_id=WP_032414902.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2591288 2591599 . - . ID=gene-LI478_RS12680;Name=LI478_RS12680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12680 NZ_CP085478.1 Protein Homology CDS 2591288 2591599 . - 0 ID=cds-WP_004143501.1;Parent=gene-LI478_RS12680;Dbxref=Genbank:WP_004143501.1;Name=WP_004143501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226890.1;locus_tag=LI478_RS12680;product=cupin;protein_id=WP_004143501.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2591621 2591884 . - . ID=gene-LI478_RS12685;Name=LI478_RS12685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12685 NZ_CP085478.1 Protein Homology CDS 2591621 2591884 . - 0 ID=cds-WP_002904643.1;Parent=gene-LI478_RS12685;Dbxref=Genbank:WP_002904643.1;Name=WP_002904643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226889.1;locus_tag=LI478_RS12685;product=VF530 family protein;protein_id=WP_002904643.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2592167 2593195 . + . ID=gene-LI478_RS12690;Name=LI478_RS12690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12690 NZ_CP085478.1 Protein Homology CDS 2592167 2593195 . + 0 ID=cds-WP_004143503.1;Parent=gene-LI478_RS12690;Dbxref=Genbank:WP_004143503.1;Name=WP_004143503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226888.1;locus_tag=LI478_RS12690;product=isopenicillin N synthase family oxygenase;protein_id=WP_004143503.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2593219 2594025 . + . ID=gene-LI478_RS12695;Name=LI478_RS12695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12695 NZ_CP085478.1 Protein Homology CDS 2593219 2594025 . + 0 ID=cds-WP_009308890.1;Parent=gene-LI478_RS12695;Dbxref=Genbank:WP_009308890.1;Name=WP_009308890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226887.1;locus_tag=LI478_RS12695;product=MetQ/NlpA family ABC transporter substrate-binding protein;protein_id=WP_009308890.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2594022 2594813 . + . ID=gene-LI478_RS12700;Name=LI478_RS12700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12700 NZ_CP085478.1 Protein Homology CDS 2594022 2594813 . + 0 ID=cds-WP_002904635.1;Parent=gene-LI478_RS12700;Dbxref=Genbank:WP_002904635.1;Name=WP_002904635.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226886.1;locus_tag=LI478_RS12700;product=ATP-binding cassette domain-containing protein;protein_id=WP_002904635.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2594810 2595469 . + . ID=gene-LI478_RS12705;Name=LI478_RS12705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12705 NZ_CP085478.1 Protein Homology CDS 2594810 2595469 . + 0 ID=cds-WP_074185254.1;Parent=gene-LI478_RS12705;Dbxref=Genbank:WP_074185254.1;Name=WP_074185254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226885.1;locus_tag=LI478_RS12705;product=ABC transporter permease;protein_id=WP_074185254.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2595480 2596538 . - . ID=gene-LI478_RS12710;Name=LI478_RS12710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12710 NZ_CP085478.1 Protein Homology CDS 2595480 2596538 . - 0 ID=cds-WP_064153119.1;Parent=gene-LI478_RS12710;Dbxref=Genbank:WP_064153119.1;Name=WP_064153119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009308893.1;locus_tag=LI478_RS12710;product=nitronate monooxygenase;protein_id=WP_064153119.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2596628 2597473 . + . ID=gene-LI478_RS12715;Name=LI478_RS12715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12715 NZ_CP085478.1 Protein Homology CDS 2596628 2597473 . + 0 ID=cds-WP_004143508.1;Parent=gene-LI478_RS12715;Dbxref=Genbank:WP_004143508.1;Name=WP_004143508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004143508.1;locus_tag=LI478_RS12715;product=LysR family transcriptional regulator;protein_id=WP_004143508.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2597470 2598627 . - . ID=gene-LI478_RS12720;Name=LI478_RS12720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12720 NZ_CP085478.1 Protein Homology CDS 2597470 2598627 . - 0 ID=cds-WP_004184010.1;Parent=gene-LI478_RS12720;Dbxref=Genbank:WP_004184010.1;Name=WP_004184010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226881.1;locus_tag=LI478_RS12720;product=YbfB/YjiJ family MFS transporter;protein_id=WP_004184010.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2598835 2599257 . + . ID=gene-LI478_RS12725;Name=LI478_RS12725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12725 NZ_CP085478.1 Protein Homology CDS 2598835 2599257 . + 0 ID=cds-WP_048331831.1;Parent=gene-LI478_RS12725;Dbxref=Genbank:WP_048331831.1;Name=WP_048331831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226880.1;locus_tag=LI478_RS12725;product=prolyl endopeptidase;protein_id=WP_048331831.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2599413 2600600 . + . ID=gene-LI478_RS12730;Name=LI478_RS12730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12730 NZ_CP085478.1 Protein Homology CDS 2599413 2600600 . + 0 ID=cds-WP_004176220.1;Parent=gene-LI478_RS12730;Dbxref=Genbank:WP_004176220.1;Name=WP_004176220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226879.1;locus_tag=LI478_RS12730;product=MFS transporter;protein_id=WP_004176220.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2600829 2601119 . + . ID=gene-LI478_RS12735;Name=LI478_RS12735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12735 NZ_CP085478.1 Protein Homology CDS 2600829 2601119 . + 0 ID=cds-WP_002904624.1;Parent=gene-LI478_RS12735;Dbxref=Genbank:WP_002904624.1;Name=WP_002904624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226878.1;locus_tag=LI478_RS12735;product=hypothetical protein;protein_id=WP_002904624.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2601328 2602089 . + . ID=gene-LI478_RS12740;Name=tam;gbkey=Gene;gene=tam;gene_biotype=protein_coding;locus_tag=LI478_RS12740 NZ_CP085478.1 Protein Homology CDS 2601328 2602089 . + 0 ID=cds-WP_023287628.1;Parent=gene-LI478_RS12740;Dbxref=Genbank:WP_023287628.1;Name=WP_023287628.1;Ontology_term=GO:0030798;gbkey=CDS;gene=tam;go_function=trans-aconitate 2-methyltransferase activity|0030798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226877.1;locus_tag=LI478_RS12740;product=trans-aconitate 2-methyltransferase;protein_id=WP_023287628.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2602250 2602570 . + . ID=gene-LI478_RS12745;Name=LI478_RS12745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12745 NZ_CP085478.1 Protein Homology CDS 2602250 2602570 . + 0 ID=cds-WP_002904619.1;Parent=gene-LI478_RS12745;Dbxref=Genbank:WP_002904619.1;Name=WP_002904619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226876.1;locus_tag=LI478_RS12745;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_002904619.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2602561 2602941 . + . ID=gene-LI478_RS12750;Name=LI478_RS12750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12750 NZ_CP085478.1 Protein Homology CDS 2602561 2602941 . + 0 ID=cds-WP_002904617.1;Parent=gene-LI478_RS12750;Dbxref=Genbank:WP_002904617.1;Name=WP_002904617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226875.1;locus_tag=LI478_RS12750;product=tautomerase family protein;protein_id=WP_002904617.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2603152 2603598 . - . ID=gene-LI478_RS12755;Name=LI478_RS12755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12755 NZ_CP085478.1 Protein Homology CDS 2603152 2603598 . - 0 ID=cds-WP_004224732.1;Parent=gene-LI478_RS12755;Dbxref=Genbank:WP_004224732.1;Name=WP_004224732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226871.1;locus_tag=LI478_RS12755;product=GNAT family N-acetyltransferase;protein_id=WP_004224732.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2603852 2605303 . - . ID=gene-LI478_RS12760;Name=LI478_RS12760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12760 NZ_CP085478.1 Protein Homology CDS 2603852 2605303 . - 0 ID=cds-WP_004179787.1;Parent=gene-LI478_RS12760;Dbxref=Genbank:WP_004179787.1;Name=WP_004179787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226870.1;locus_tag=LI478_RS12760;product=tagaturonate reductase;protein_id=WP_004179787.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2605417 2605947 . - . ID=gene-LI478_RS12765;Name=LI478_RS12765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12765 NZ_CP085478.1 Protein Homology CDS 2605417 2605947 . - 0 ID=cds-WP_002904601.1;Parent=gene-LI478_RS12765;Dbxref=Genbank:WP_002904601.1;Name=WP_002904601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226869.1;locus_tag=LI478_RS12765;product=GNAT family N-acetyltransferase;protein_id=WP_002904601.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2606025 2607449 . - . ID=gene-LI478_RS12770;Name=LI478_RS12770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12770 NZ_CP085478.1 Protein Homology CDS 2606025 2607449 . - 0 ID=cds-WP_004148352.1;Parent=gene-LI478_RS12770;Dbxref=Genbank:WP_004148352.1;Name=WP_004148352.1;Ontology_term=GO:0009966,GO:0009975;gbkey=CDS;go_function=cyclase activity|0009975||IEA;go_process=regulation of signal transduction|0009966||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226868.1;locus_tag=LI478_RS12770;product=GGDEF domain-containing protein;protein_id=WP_004148352.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2607564 2607932 . - . ID=gene-LI478_RS12775;Name=LI478_RS12775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12775 NZ_CP085478.1 Protein Homology CDS 2607564 2607932 . - 0 ID=cds-WP_004190206.1;Parent=gene-LI478_RS12775;Dbxref=Genbank:WP_004190206.1;Name=WP_004190206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226867.1;locus_tag=LI478_RS12775;product=DUF4186 domain-containing protein;protein_id=WP_004190206.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2607932 2608858 . - . ID=gene-LI478_RS12780;Name=glsB;gbkey=Gene;gene=glsB;gene_biotype=protein_coding;locus_tag=LI478_RS12780 NZ_CP085478.1 Protein Homology CDS 2607932 2608858 . - 0 ID=cds-WP_004179782.1;Parent=gene-LI478_RS12780;Dbxref=Genbank:WP_004179782.1;Name=WP_004179782.1;Ontology_term=GO:0006541,GO:0004359;gbkey=CDS;gene=glsB;go_function=glutaminase activity|0004359||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226866.1;locus_tag=LI478_RS12780;product=glutaminase B;protein_id=WP_004179782.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2608939 2610327 . - . ID=gene-LI478_RS12785;Name=sad;gbkey=Gene;gene=sad;gene_biotype=protein_coding;locus_tag=LI478_RS12785 NZ_CP085478.1 Protein Homology CDS 2608939 2610327 . - 0 ID=cds-WP_023280053.1;Parent=gene-LI478_RS12785;Dbxref=Genbank:WP_023280053.1;Name=WP_023280053.1;Ontology_term=GO:0004030;gbkey=CDS;gene=sad;go_function=aldehyde dehydrogenase [NAD(P)+] activity|0004030||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226865.1;locus_tag=LI478_RS12785;product=succinate-semialdehyde dehydrogenase;protein_id=WP_023280053.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2610429 2611307 . + . ID=gene-LI478_RS12790;Name=LI478_RS12790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12790 NZ_CP085478.1 Protein Homology CDS 2610429 2611307 . + 0 ID=cds-WP_002904495.1;Parent=gene-LI478_RS12790;Dbxref=Genbank:WP_002904495.1;Name=WP_002904495.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226864.1;locus_tag=LI478_RS12790;product=LysR family transcriptional regulator;protein_id=WP_002904495.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2611261 2611743 . - . ID=gene-LI478_RS12795;Name=LI478_RS12795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12795 NZ_CP085478.1 Protein Homology CDS 2611261 2611743 . - 0 ID=cds-WP_002904493.1;Parent=gene-LI478_RS12795;Dbxref=Genbank:WP_002904493.1;Name=WP_002904493.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226863.1;locus_tag=LI478_RS12795;product=GNAT family N-acetyltransferase;protein_id=WP_002904493.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2611888 2612832 . + . ID=gene-LI478_RS12800;Name=LI478_RS12800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12800 NZ_CP085478.1 Protein Homology CDS 2611888 2612832 . + 0 ID=cds-WP_002904491.1;Parent=gene-LI478_RS12800;Dbxref=Genbank:WP_002904491.1;Name=WP_002904491.1;Ontology_term=GO:0006096,GO:0004459,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=L-lactate dehydrogenase activity|0004459||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226862.1;locus_tag=LI478_RS12800;product=L-lactate dehydrogenase;protein_id=WP_002904491.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2612847 2613608 . - . ID=gene-LI478_RS12805;Name=LI478_RS12805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12805 NZ_CP085478.1 Protein Homology CDS 2612847 2613608 . - 0 ID=cds-WP_002904489.1;Parent=gene-LI478_RS12805;Dbxref=Genbank:WP_002904489.1;Name=WP_002904489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226861.1;locus_tag=LI478_RS12805;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_002904489.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2613610 2614596 . - . ID=gene-LI478_RS12810;Name=LI478_RS12810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12810 NZ_CP085478.1 Protein Homology CDS 2613610 2614596 . - 0 ID=cds-WP_004151623.1;Parent=gene-LI478_RS12810;Dbxref=Genbank:WP_004151623.1;Name=WP_004151623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226860.1;locus_tag=LI478_RS12810;product=D-threonate 4-phosphate dehydrogenase;protein_id=WP_004151623.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2614589 2615824 . - . ID=gene-LI478_RS12815;Name=LI478_RS12815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12815 NZ_CP085478.1 Protein Homology CDS 2614589 2615824 . - 0 ID=cds-WP_048332804.1;Parent=gene-LI478_RS12815;Dbxref=Genbank:WP_048332804.1;Name=WP_048332804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226859.1;locus_tag=LI478_RS12815;product=four-carbon acid sugar kinase family protein;protein_id=WP_048332804.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2615999 2617147 . + . ID=gene-LI478_RS12820;Name=LI478_RS12820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12820 NZ_CP085478.1 Protein Homology CDS 2615999 2617147 . + 0 ID=cds-WP_004179774.1;Parent=gene-LI478_RS12820;Dbxref=Genbank:WP_004179774.1;Name=WP_004179774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226858.1;locus_tag=LI478_RS12820;product=iron-containing alcohol dehydrogenase;protein_id=WP_004179774.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2617162 2618046 . + . ID=gene-LI478_RS12825;Name=LI478_RS12825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12825 NZ_CP085478.1 Protein Homology CDS 2617162 2618046 . + 0 ID=cds-WP_014907630.1;Parent=gene-LI478_RS12825;Dbxref=Genbank:WP_014907630.1;Name=WP_014907630.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004892103.1;locus_tag=LI478_RS12825;product=dihydrodipicolinate synthase family protein;protein_id=WP_014907630.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2618132 2619082 . + . ID=gene-LI478_RS12830;Name=LI478_RS12830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12830 NZ_CP085478.1 Protein Homology CDS 2618132 2619082 . + 0 ID=cds-WP_032438428.1;Parent=gene-LI478_RS12830;Dbxref=Genbank:WP_032438428.1;Name=WP_032438428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004179770.1;locus_tag=LI478_RS12830;product=phosphoglycerate dehydrogenase;protein_id=WP_032438428.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2619146 2620465 . + . ID=gene-LI478_RS12835;Name=LI478_RS12835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12835 NZ_CP085478.1 Protein Homology CDS 2619146 2620465 . + 0 ID=cds-WP_004179768.1;Parent=gene-LI478_RS12835;Dbxref=Genbank:WP_004179768.1;Name=WP_004179768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004179768.1;locus_tag=LI478_RS12835;product=MFS transporter;protein_id=WP_004179768.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2620511 2621305 . - . ID=gene-LI478_RS12840;Name=LI478_RS12840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12840 NZ_CP085478.1 Protein Homology CDS 2620511 2621305 . - 0 ID=cds-WP_023287622.1;Parent=gene-LI478_RS12840;Dbxref=Genbank:WP_023287622.1;Name=WP_023287622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012541776.1;locus_tag=LI478_RS12840;product=PhzF family phenazine biosynthesis protein;protein_id=WP_023287622.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2621507 2622706 . + . ID=gene-LI478_RS12845;Name=LI478_RS12845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12845 NZ_CP085478.1 Protein Homology CDS 2621507 2622706 . + 0 ID=cds-WP_002904407.1;Parent=gene-LI478_RS12845;Dbxref=Genbank:WP_002904407.1;Name=WP_002904407.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004205967.1;locus_tag=LI478_RS12845;product=sugar transporter;protein_id=WP_002904407.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2622775 2623443 . - . ID=gene-LI478_RS12850;Name=LI478_RS12850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12850 NZ_CP085478.1 Protein Homology CDS 2622775 2623443 . - 0 ID=cds-WP_002904403.1;Parent=gene-LI478_RS12850;Dbxref=Genbank:WP_002904403.1;Name=WP_002904403.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226850.1;locus_tag=LI478_RS12850;product=MarC family NAAT transporter;protein_id=WP_002904403.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2623487 2623615 . - . ID=gene-LI478_RS12855;Name=LI478_RS12855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12855 NZ_CP085478.1 Protein Homology CDS 2623487 2623615 . - 0 ID=cds-WP_004217987.1;Parent=gene-LI478_RS12855;Dbxref=Genbank:WP_004217987.1;Name=WP_004217987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226849.1;locus_tag=LI478_RS12855;product=hypothetical protein;protein_id=WP_004217987.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2623705 2624139 . + . ID=gene-LI478_RS12860;Name=marR;gbkey=Gene;gene=marR;gene_biotype=protein_coding;locus_tag=LI478_RS12860 NZ_CP085478.1 Protein Homology CDS 2623705 2624139 . + 0 ID=cds-WP_004143563.1;Parent=gene-LI478_RS12860;Dbxref=Genbank:WP_004143563.1;Name=WP_004143563.1;gbkey=CDS;gene=marR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226848.1;locus_tag=LI478_RS12860;product=multiple antibiotic resistance transcriptional regulator MarR;protein_id=WP_004143563.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2624160 2624534 . + . ID=gene-LI478_RS12865;Name=marA;gbkey=Gene;gene=marA;gene_biotype=protein_coding;locus_tag=LI478_RS12865 NZ_CP085478.1 Protein Homology CDS 2624160 2624534 . + 0 ID=cds-WP_002904397.1;Parent=gene-LI478_RS12865;Dbxref=Genbank:WP_002904397.1;Name=WP_002904397.1;gbkey=CDS;gene=marA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226847.1;locus_tag=LI478_RS12865;product=MDR efflux pump AcrAB transcriptional activator MarA;protein_id=WP_002904397.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2624575 2624793 . + . ID=gene-LI478_RS12870;Name=marB;gbkey=Gene;gene=marB;gene_biotype=protein_coding;locus_tag=LI478_RS12870 NZ_CP085478.1 Protein Homology CDS 2624575 2624793 . + 0 ID=cds-WP_002904394.1;Parent=gene-LI478_RS12870;Dbxref=Genbank:WP_002904394.1;Name=WP_002904394.1;gbkey=CDS;gene=marB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226846.1;locus_tag=LI478_RS12870;product=multiple antibiotic resistance protein MarB;protein_id=WP_002904394.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2624842 2625741 . - . ID=gene-LI478_RS12875;Name=eamA;gbkey=Gene;gene=eamA;gene_biotype=protein_coding;locus_tag=LI478_RS12875 NZ_CP085478.1 Protein Homology CDS 2624842 2625741 . - 0 ID=cds-WP_227394136.1;Parent=gene-LI478_RS12875;Dbxref=Genbank:WP_227394136.1;Name=WP_227394136.1;Ontology_term=GO:0016020;gbkey=CDS;gene=eamA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226845.1;locus_tag=LI478_RS12875;product=O-acetylserine/cysteine exporter;protein_id=WP_227394136.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2625937 2627133 . + . ID=gene-LI478_RS12880;Name=ydeE;gbkey=Gene;gene=ydeE;gene_biotype=protein_coding;locus_tag=LI478_RS12880 NZ_CP085478.1 Protein Homology CDS 2625937 2627133 . + 0 ID=cds-WP_002904391.1;Parent=gene-LI478_RS12880;Dbxref=Genbank:WP_002904391.1;Name=WP_002904391.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=ydeE;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226844.1;locus_tag=LI478_RS12880;product=efflux MFS transporter YdeE;protein_id=WP_002904391.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2627263 2627745 . + . ID=gene-LI478_RS12885;Name=LI478_RS12885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12885 NZ_CP085478.1 Protein Homology CDS 2627263 2627745 . + 0 ID=cds-WP_002904389.1;Parent=gene-LI478_RS12885;Dbxref=Genbank:WP_002904389.1;Name=WP_002904389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226843.1;locus_tag=LI478_RS12885;product=helix-turn-helix domain-containing protein;protein_id=WP_002904389.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2627781 2628479 . - . ID=gene-LI478_RS12890;Name=urtE;gbkey=Gene;gene=urtE;gene_biotype=protein_coding;locus_tag=LI478_RS12890 NZ_CP085478.1 Protein Homology CDS 2627781 2628479 . - 0 ID=cds-WP_004176246.1;Parent=gene-LI478_RS12890;Dbxref=Genbank:WP_004176246.1;Name=WP_004176246.1;Ontology_term=GO:0015840,GO:0005524,GO:0033221,GO:0009898,GO:0055052;gbkey=CDS;gene=urtE;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled urea transmembrane transporter activity|0033221||IEA;go_process=urea transport|0015840||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226842.1;locus_tag=LI478_RS12890;product=urea ABC transporter ATP-binding subunit UrtE;protein_id=WP_004176246.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2628489 2629286 . - . ID=gene-LI478_RS12895;Name=urtD;gbkey=Gene;gene=urtD;gene_biotype=protein_coding;locus_tag=LI478_RS12895 NZ_CP085478.1 Protein Homology CDS 2628489 2629286 . - 0 ID=cds-WP_004190223.1;Parent=gene-LI478_RS12895;Dbxref=Genbank:WP_004190223.1;Name=WP_004190223.1;Ontology_term=GO:0015840,GO:0005524,GO:0033221,GO:0009898,GO:0055052;gbkey=CDS;gene=urtD;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled urea transmembrane transporter activity|0033221||IEA;go_process=urea transport|0015840||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226841.1;locus_tag=LI478_RS12895;product=urea ABC transporter ATP-binding protein UrtD;protein_id=WP_004190223.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2629286 2630359 . - . ID=gene-LI478_RS12900;Name=urtC;gbkey=Gene;gene=urtC;gene_biotype=protein_coding;locus_tag=LI478_RS12900 NZ_CP085478.1 Protein Homology CDS 2629286 2630359 . - 0 ID=cds-WP_004190225.1;Parent=gene-LI478_RS12900;Dbxref=Genbank:WP_004190225.1;Name=WP_004190225.1;Ontology_term=GO:0015840,GO:0033221,GO:0005886,GO:0055052;gbkey=CDS;gene=urtC;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled urea transmembrane transporter activity|0033221||IEA;go_process=urea transport|0015840||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226840.1;locus_tag=LI478_RS12900;product=urea ABC transporter permease subunit UrtC;protein_id=WP_004190225.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2630359 2631933 . - . ID=gene-LI478_RS12905;Name=urtB;gbkey=Gene;gene=urtB;gene_biotype=protein_coding;locus_tag=LI478_RS12905 NZ_CP085478.1 Protein Homology CDS 2630359 2631933 . - 0 ID=cds-WP_004179758.1;Parent=gene-LI478_RS12905;Dbxref=Genbank:WP_004179758.1;Name=WP_004179758.1;Ontology_term=GO:0015840,GO:0033221,GO:0005886,GO:0055052;gbkey=CDS;gene=urtB;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled urea transmembrane transporter activity|0033221||IEA;go_process=urea transport|0015840||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226839.1;locus_tag=LI478_RS12905;product=urea ABC transporter permease subunit UrtB;protein_id=WP_004179758.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2631995 2633266 . - . ID=gene-LI478_RS12910;Name=urtA;gbkey=Gene;gene=urtA;gene_biotype=protein_coding;locus_tag=LI478_RS12910 NZ_CP085478.1 Protein Homology CDS 2631995 2633266 . - 0 ID=cds-WP_004176249.1;Parent=gene-LI478_RS12910;Dbxref=Genbank:WP_004176249.1;Name=WP_004176249.1;Ontology_term=GO:0015840,GO:0033219,GO:0033221,GO:0030288,GO:0055052;gbkey=CDS;gene=urtA;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=urea binding|0033219||IEA,ATPase-coupled urea transmembrane transporter activity|0033221||IEA;go_process=urea transport|0015840||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226838.1;locus_tag=LI478_RS12910;product=urea ABC transporter substrate-binding protein;protein_id=WP_004176249.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2633438 2634541 . - . ID=gene-LI478_RS12915;Name=LI478_RS12915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12915 NZ_CP085478.1 Protein Homology CDS 2633438 2634541 . - 0 ID=cds-WP_002904248.1;Parent=gene-LI478_RS12915;Dbxref=Genbank:WP_002904248.1;Name=WP_002904248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226837.1;locus_tag=LI478_RS12915;product=cobalamin-independent methionine synthase II family protein;protein_id=WP_002904248.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2634690 2635088 . - . ID=gene-LI478_RS12920;Name=LI478_RS12920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12920 NZ_CP085478.1 Protein Homology CDS 2634690 2635088 . - 0 ID=cds-WP_004214783.1;Parent=gene-LI478_RS12920;Dbxref=Genbank:WP_004214783.1;Name=WP_004214783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226834.1;locus_tag=LI478_RS12920;product=rhodanese-like domain-containing protein;protein_id=WP_004214783.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2635156 2636253 . + . ID=gene-LI478_RS12925;Name=ftrA;gbkey=Gene;gene=ftrA;gene_biotype=protein_coding;locus_tag=LI478_RS12925 NZ_CP085478.1 Protein Homology CDS 2635156 2636253 . + 0 ID=cds-WP_227394137.1;Parent=gene-LI478_RS12925;Dbxref=Genbank:WP_227394137.1;Name=WP_227394137.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=ftrA;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226833.1;locus_tag=LI478_RS12925;product=transcriptional regulator FtrA;protein_id=WP_227394137.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2636222 2636437 . + . ID=gene-LI478_RS12930;Name=LI478_RS12930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12930 NZ_CP085478.1 Protein Homology CDS 2636222 2636437 . + 0 ID=cds-WP_004205985.1;Parent=gene-LI478_RS12930;Dbxref=Genbank:WP_004205985.1;Name=WP_004205985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226832.1;locus_tag=LI478_RS12930;product=DUF4177 domain-containing protein;protein_id=WP_004205985.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2636490 2636930 . - . ID=gene-LI478_RS12935;Name=LI478_RS12935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12935 NZ_CP085478.1 Protein Homology CDS 2636490 2636930 . - 0 ID=cds-WP_064153106.1;Parent=gene-LI478_RS12935;Dbxref=Genbank:WP_064153106.1;Name=WP_064153106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226831.1;locus_tag=LI478_RS12935;product=GNAT family N-acetyltransferase;protein_id=WP_064153106.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2636992 2637189 . + . ID=gene-LI478_RS12940;Name=LI478_RS12940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12940 NZ_CP085478.1 Protein Homology CDS 2636992 2637189 . + 0 ID=cds-WP_032438434.1;Parent=gene-LI478_RS12940;Dbxref=Genbank:WP_032438434.1;Name=WP_032438434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004166892.1;locus_tag=LI478_RS12940;product=hypothetical protein;protein_id=WP_032438434.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2637186 2638250 . - . ID=gene-LI478_RS12945;Name=LI478_RS12945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12945 NZ_CP085478.1 Protein Homology CDS 2637186 2638250 . - 0 ID=cds-WP_004183956.1;Parent=gene-LI478_RS12945;Dbxref=Genbank:WP_004183956.1;Name=WP_004183956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226829.1;locus_tag=LI478_RS12945;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_004183956.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2638447 2641554 . + . ID=gene-LI478_RS12950;Name=LI478_RS12950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12950 NZ_CP085478.1 Protein Homology CDS 2638447 2641554 . + 0 ID=cds-WP_227394138.1;Parent=gene-LI478_RS12950;Dbxref=Genbank:WP_227394138.1;Name=WP_227394138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020805006.1;locus_tag=LI478_RS12950;product=beta-galactosidase;protein_id=WP_227394138.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2641609 2642874 . + . ID=gene-LI478_RS12955;Name=LI478_RS12955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12955 NZ_CP085478.1 Protein Homology CDS 2641609 2642874 . + 0 ID=cds-WP_004176258.1;Parent=gene-LI478_RS12955;Dbxref=Genbank:WP_004176258.1;Name=WP_004176258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004151612.1;locus_tag=LI478_RS12955;product=MFS transporter;protein_id=WP_004176258.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2642905 2643993 . - . ID=gene-LI478_RS12960;Name=LI478_RS12960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12960 NZ_CP085478.1 Protein Homology CDS 2642905 2643993 . - 0 ID=cds-WP_001620097.1;Parent=gene-LI478_RS12960;Dbxref=Genbank:WP_001620097.1;Name=WP_001620097.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226824.1;locus_tag=LI478_RS12960;product=AAA family ATPase;protein_id=WP_001620097.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2644080 2644340 . - . ID=gene-LI478_RS12965;Name=LI478_RS12965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12965 NZ_CP085478.1 Protein Homology CDS 2644080 2644340 . - 0 ID=cds-WP_004176262.1;Parent=gene-LI478_RS12965;Dbxref=Genbank:WP_004176262.1;Name=WP_004176262.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002904006.1;locus_tag=LI478_RS12965;product=hypothetical protein;protein_id=WP_004176262.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2644638 2645498 . + . ID=gene-LI478_RS12970;Name=LI478_RS12970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12970 NZ_CP085478.1 Protein Homology CDS 2644638 2645498 . + 0 ID=cds-WP_004176269.1;Parent=gene-LI478_RS12970;Dbxref=Genbank:WP_004176269.1;Name=WP_004176269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001620095.1;locus_tag=LI478_RS12970;product=broad-spectrum class A beta-lactamase SHV-11;protein_id=WP_004176269.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2645519 2646280 . - . ID=gene-LI478_RS12975;Name=LI478_RS12975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12975 NZ_CP085478.1 Protein Homology CDS 2645519 2646280 . - 0 ID=cds-WP_002210513.1;Parent=gene-LI478_RS12975;Dbxref=Genbank:WP_002210513.1;Name=WP_002210513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226821.1;locus_tag=LI478_RS12975;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_002210513.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2646541 2647443 . + . ID=gene-LI478_RS12980;Name=LI478_RS12980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12980 NZ_CP085478.1 Protein Homology CDS 2646541 2647443 . + 0 ID=cds-WP_032414898.1;Parent=gene-LI478_RS12980;Dbxref=Genbank:WP_032414898.1;Name=WP_032414898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226820.1;locus_tag=LI478_RS12980;product=NAD(P)-dependent oxidoreductase;protein_id=WP_032414898.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2647455 2648720 . + . ID=gene-LI478_RS12985;Name=LI478_RS12985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12985 NZ_CP085478.1 Protein Homology CDS 2647455 2648720 . + 0 ID=cds-WP_004224682.1;Parent=gene-LI478_RS12985;Dbxref=Genbank:WP_004224682.1;Name=WP_004224682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226819.1;locus_tag=LI478_RS12985;product=four-carbon acid sugar kinase family protein;protein_id=WP_004224682.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2648713 2649333 . + . ID=gene-LI478_RS12990;Name=LI478_RS12990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12990 NZ_CP085478.1 Protein Homology CDS 2648713 2649333 . + 0 ID=cds-WP_002210516.1;Parent=gene-LI478_RS12990;Dbxref=Genbank:WP_002210516.1;Name=WP_002210516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226818.1;locus_tag=LI478_RS12990;product=aldolase;protein_id=WP_002210516.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2649338 2650120 . + . ID=gene-LI478_RS12995;Name=LI478_RS12995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS12995 NZ_CP085478.1 Protein Homology CDS 2649338 2650120 . + 0 ID=cds-WP_004179747.1;Parent=gene-LI478_RS12995;Dbxref=Genbank:WP_004179747.1;Name=WP_004179747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226817.1;locus_tag=LI478_RS12995;product=HPr family phosphocarrier protein;protein_id=WP_004179747.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2650178 2651542 . + . ID=gene-LI478_RS13000;Name=LI478_RS13000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13000 NZ_CP085478.1 Protein Homology CDS 2650178 2651542 . + 0 ID=cds-WP_002903916.1;Parent=gene-LI478_RS13000;Dbxref=Genbank:WP_002903916.1;Name=WP_002903916.1;Ontology_term=GO:0035429,GO:0015128,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=gluconate transmembrane transporter activity|0015128||IEA;go_process=gluconate transmembrane transport|0035429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226816.1;locus_tag=LI478_RS13000;product=GntP family transporter;protein_id=WP_002903916.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2651569 2652495 . - . ID=gene-LI478_RS13005;Name=LI478_RS13005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13005 NZ_CP085478.1 Protein Homology CDS 2651569 2652495 . - 0 ID=cds-WP_021314206.1;Parent=gene-LI478_RS13005;Dbxref=Genbank:WP_021314206.1;Name=WP_021314206.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226815.1;locus_tag=LI478_RS13005;product=helix-turn-helix domain-containing protein;protein_id=WP_021314206.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2652806 2653417 . + . ID=gene-LI478_RS13010;Name=kbvR;gbkey=Gene;gene=kbvR;gene_biotype=protein_coding;locus_tag=LI478_RS13010 NZ_CP085478.1 Protein Homology CDS 2652806 2653417 . + 0 ID=cds-WP_040225961.1;Parent=gene-LI478_RS13010;Dbxref=Genbank:WP_040225961.1;Name=WP_040225961.1;gbkey=CDS;gene=kbvR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226814.1;locus_tag=LI478_RS13010;product=LuxR family transcriptional regulator KbvR;protein_id=WP_040225961.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2653968 2655185 . + . ID=gene-LI478_RS13020;Name=LI478_RS13020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13020 NZ_CP085478.1 Protein Homology CDS 2653968 2655185 . + 0 ID=cds-WP_023327961.1;Parent=gene-LI478_RS13020;Dbxref=Genbank:WP_023327961.1;Name=WP_023327961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226813.1;locus_tag=LI478_RS13020;product=diguanylate phosphodiesterase;protein_id=WP_023327961.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2655206 2655718 . - . ID=gene-LI478_RS13025;Name=LI478_RS13025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13025 NZ_CP085478.1 Protein Homology CDS 2655206 2655718 . - 0 ID=cds-WP_002903810.1;Parent=gene-LI478_RS13025;Dbxref=Genbank:WP_002903810.1;Name=WP_002903810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226812.1;locus_tag=LI478_RS13025;product=2-oxo-tetronate isomerase;protein_id=WP_002903810.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2655884 2656357 . - . ID=gene-LI478_RS13030;Name=LI478_RS13030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13030 NZ_CP085478.1 Protein Homology CDS 2655884 2656357 . - 0 ID=cds-WP_002903808.1;Parent=gene-LI478_RS13030;Dbxref=Genbank:WP_002903808.1;Name=WP_002903808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226811.1;locus_tag=LI478_RS13030;product=Hsp20 family protein;protein_id=WP_002903808.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2656803 2656904 . - . ID=gene-LI478_RS13035;Name=LI478_RS13035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13035 NZ_CP085478.1 Protein Homology CDS 2656803 2656904 . - 0 ID=cds-WP_223174615.1;Parent=gene-LI478_RS13035;Dbxref=Genbank:WP_223174615.1;Name=WP_223174615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226810.1;locus_tag=LI478_RS13035;product=hypothetical protein;protein_id=WP_223174615.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2657179 2657301 . + . ID=gene-LI478_RS13040;Name=LI478_RS13040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13040 NZ_CP085478.1 Protein Homology CDS 2657179 2657301 . + 0 ID=cds-WP_004225117.1;Parent=gene-LI478_RS13040;Dbxref=Genbank:WP_004225117.1;Name=WP_004225117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226809.1;locus_tag=LI478_RS13040;product=hypothetical protein;protein_id=WP_004225117.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2657369 2658004 . + . ID=gene-LI478_RS13045;Name=LI478_RS13045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13045 NZ_CP085478.1 Protein Homology CDS 2657369 2658004 . + 0 ID=cds-WP_023286395.1;Parent=gene-LI478_RS13045;Dbxref=Genbank:WP_023286395.1;Name=WP_023286395.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226808.1;locus_tag=LI478_RS13045;product=LuxR family transcriptional regulator;protein_id=WP_023286395.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2658001 2658123 . - . ID=gene-LI478_RS13050;Name=LI478_RS13050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13050 NZ_CP085478.1 Protein Homology CDS 2658001 2658123 . - 0 ID=cds-WP_004143611.1;Parent=gene-LI478_RS13050;Dbxref=Genbank:WP_004143611.1;Name=WP_004143611.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033853.2;locus_tag=LI478_RS13050;product=small membrane protein;protein_id=WP_004143611.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2658178 2658306 . - . ID=gene-LI478_RS13055;Name=LI478_RS13055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13055 NZ_CP085478.1 Protein Homology CDS 2658178 2658306 . - 0 ID=cds-WP_004219446.1;Parent=gene-LI478_RS13055;Dbxref=Genbank:WP_004219446.1;Name=WP_004219446.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226806.1;locus_tag=LI478_RS13055;product=hypothetical protein;protein_id=WP_004219446.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2658478 2659152 . + . ID=gene-LI478_RS13060;Name=LI478_RS13060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13060 NZ_CP085478.1 Protein Homology CDS 2658478 2659152 . + 0 ID=cds-WP_004176282.1;Parent=gene-LI478_RS13060;Dbxref=Genbank:WP_004176282.1;Name=WP_004176282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226805.1;locus_tag=LI478_RS13060;product=SOS response-associated peptidase;protein_id=WP_004176282.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2659203 2659973 . - . ID=gene-LI478_RS13065;Name=LI478_RS13065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13065 NZ_CP085478.1 Protein Homology CDS 2659203 2659973 . - 0 ID=cds-WP_223203126.1;Parent=gene-LI478_RS13065;Dbxref=Genbank:WP_223203126.1;Name=WP_223203126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015386917.1;locus_tag=LI478_RS13065;product=helix-turn-helix transcriptional regulator;protein_id=WP_223203126.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2660073 2660459 . + . ID=gene-LI478_RS13070;Name=LI478_RS13070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13070 NZ_CP085478.1 Protein Homology CDS 2660073 2660459 . + 0 ID=cds-WP_002903735.1;Parent=gene-LI478_RS13070;Dbxref=Genbank:WP_002903735.1;Name=WP_002903735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002903735.1;locus_tag=LI478_RS13070;product=nuclear transport factor 2 family protein;protein_id=WP_002903735.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2660537 2662582 . - . ID=gene-LI478_RS13075;Name=dcp;gbkey=Gene;gene=dcp;gene_biotype=protein_coding;locus_tag=LI478_RS13075 NZ_CP085478.1 Protein Homology CDS 2660537 2662582 . - 0 ID=cds-WP_016946663.1;Parent=gene-LI478_RS13075;Dbxref=Genbank:WP_016946663.1;Name=WP_016946663.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=dcp;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226803.1;locus_tag=LI478_RS13075;product=peptidyl-dipeptidase Dcp;protein_id=WP_016946663.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2662713 2663462 . + . ID=gene-LI478_RS13080;Name=ydfG;gbkey=Gene;gene=ydfG;gene_biotype=protein_coding;locus_tag=LI478_RS13080 NZ_CP085478.1 Protein Homology CDS 2662713 2663462 . + 0 ID=cds-WP_002903733.1;Parent=gene-LI478_RS13080;Dbxref=Genbank:WP_002903733.1;Name=WP_002903733.1;Ontology_term=GO:0016491;gbkey=CDS;gene=ydfG;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226802.1;locus_tag=LI478_RS13080;product=bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG;protein_id=WP_002903733.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2663554 2664240 . + . ID=gene-LI478_RS13085;Name=LI478_RS13085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13085 NZ_CP085478.1 Protein Homology CDS 2663554 2664240 . + 0 ID=cds-WP_002903730.1;Parent=gene-LI478_RS13085;Dbxref=Genbank:WP_002903730.1;Name=WP_002903730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226801.1;locus_tag=LI478_RS13085;product=GntR family transcriptional regulator;protein_id=WP_002903730.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2664291 2664722 . - . ID=gene-LI478_RS13090;Name=LI478_RS13090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13090 NZ_CP085478.1 Protein Homology CDS 2664291 2664722 . - 0 ID=cds-WP_002903728.1;Parent=gene-LI478_RS13090;Dbxref=Genbank:WP_002903728.1;Name=WP_002903728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226800.1;locus_tag=LI478_RS13090;product=universal stress protein;protein_id=WP_002903728.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2664987 2666450 . - . ID=gene-LI478_RS13095;Name=LI478_RS13095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13095 NZ_CP085478.1 Protein Homology CDS 2664987 2666450 . - 0 ID=cds-WP_021314212.1;Parent=gene-LI478_RS13095;Dbxref=Genbank:WP_021314212.1;Name=WP_021314212.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226799.1;locus_tag=LI478_RS13095;product=fructuronate reductase;protein_id=WP_021314212.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2666714 2667997 . - . ID=gene-LI478_RS13100;Name=LI478_RS13100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13100 NZ_CP085478.1 Protein Homology CDS 2666714 2667997 . - 0 ID=cds-WP_002903724.1;Parent=gene-LI478_RS13100;Dbxref=Genbank:WP_002903724.1;Name=WP_002903724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226798.1;locus_tag=LI478_RS13100;product=MFS transporter;protein_id=WP_002903724.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2668112 2668474 . - . ID=gene-LI478_RS13105;Name=LI478_RS13105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13105 NZ_CP085478.1 Protein Homology CDS 2668112 2668474 . - 0 ID=cds-WP_004219442.1;Parent=gene-LI478_RS13105;Dbxref=Genbank:WP_004219442.1;Name=WP_004219442.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226797.1;locus_tag=LI478_RS13105;product=YnfA family protein;protein_id=WP_004219442.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2668583 2668924 . + . ID=gene-LI478_RS13110;Name=LI478_RS13110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13110 NZ_CP085478.1 Protein Homology CDS 2668583 2668924 . + 0 ID=cds-WP_002903720.1;Parent=gene-LI478_RS13110;Dbxref=Genbank:WP_002903720.1;Name=WP_002903720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226796.1;locus_tag=LI478_RS13110;product=DUF1283 family protein;protein_id=WP_002903720.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2669003 2669563 . + . ID=gene-LI478_RS13115;Name=speG;gbkey=Gene;gene=speG;gene_biotype=protein_coding;locus_tag=LI478_RS13115 NZ_CP085478.1 Protein Homology CDS 2669003 2669563 . + 0 ID=cds-WP_227394139.1;Parent=gene-LI478_RS13115;Dbxref=Genbank:WP_227394139.1;Name=WP_227394139.1;Ontology_term=GO:0008080;gbkey=CDS;gene=speG;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226795.1;locus_tag=LI478_RS13115;product=spermidine N1-acetyltransferase;protein_id=WP_227394139.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2669557 2670267 . - . ID=gene-LI478_RS13120;Name=LI478_RS13120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13120 NZ_CP085478.1 Protein Homology CDS 2669557 2670267 . - 0 ID=cds-WP_004183934.1;Parent=gene-LI478_RS13120;Dbxref=Genbank:WP_004183934.1;Name=WP_004183934.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226794.1;locus_tag=LI478_RS13120;product=YnfC family lipoprotein;protein_id=WP_004183934.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2670369 2670638 . + . ID=gene-LI478_RS13125;Name=LI478_RS13125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13125 NZ_CP085478.1 Protein Homology CDS 2670369 2670638 . + 0 ID=cds-WP_002903714.1;Parent=gene-LI478_RS13125;Dbxref=Genbank:WP_002903714.1;Name=WP_002903714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226793.1;locus_tag=LI478_RS13125;product=DUF1161 domain-containing protein;protein_id=WP_002903714.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2670789 2673227 . + . ID=gene-LI478_RS13130;Name=LI478_RS13130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13130 NZ_CP085478.1 Protein Homology CDS 2670789 2673227 . + 0 ID=cds-WP_064153105.1;Parent=gene-LI478_RS13130;Dbxref=Genbank:WP_064153105.1;Name=WP_064153105.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226792.1;locus_tag=LI478_RS13130;product=dimethyl sulfoxide reductase subunit A;protein_id=WP_064153105.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2673238 2673855 . + . ID=gene-LI478_RS13135;Name=dmsB;gbkey=Gene;gene=dmsB;gene_biotype=protein_coding;locus_tag=LI478_RS13135 NZ_CP085478.1 Protein Homology CDS 2673238 2673855 . + 0 ID=cds-WP_004152235.1;Parent=gene-LI478_RS13135;Dbxref=Genbank:WP_004152235.1;Name=WP_004152235.1;gbkey=CDS;gene=dmsB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226791.1;locus_tag=LI478_RS13135;product=dimethylsulfoxide reductase subunit B;protein_id=WP_004152235.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2673857 2674714 . + . ID=gene-LI478_RS13140;Name=LI478_RS13140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13140 NZ_CP085478.1 Protein Homology CDS 2673857 2674714 . + 0 ID=cds-WP_002903710.1;Parent=gene-LI478_RS13140;Dbxref=Genbank:WP_002903710.1;Name=WP_002903710.1;Ontology_term=GO:0019645,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009308926.1;locus_tag=LI478_RS13140;product=dimethyl sulfoxide reductase anchor subunit;protein_id=WP_002903710.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2674756 2675364 . + . ID=gene-LI478_RS13145;Name=dmsD;gbkey=Gene;gene=dmsD;gene_biotype=protein_coding;locus_tag=LI478_RS13145 NZ_CP085478.1 Protein Homology CDS 2674756 2675364 . + 0 ID=cds-WP_004209765.1;Parent=gene-LI478_RS13145;Dbxref=Genbank:WP_004209765.1;Name=WP_004209765.1;gbkey=CDS;gene=dmsD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226788.1;locus_tag=LI478_RS13145;product=Tat proofreading chaperone DmsD;protein_id=WP_004209765.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2675498 2676793 . + . ID=gene-LI478_RS13150;Name=clcB;gbkey=Gene;gene=clcB;gene_biotype=protein_coding;locus_tag=LI478_RS13150 NZ_CP085478.1 Protein Homology CDS 2675498 2676793 . + 0 ID=cds-WP_004148305.1;Parent=gene-LI478_RS13150;Dbxref=Genbank:WP_004148305.1;Name=WP_004148305.1;Ontology_term=GO:0006821,GO:0010447,GO:0005247,GO:0016020;gbkey=CDS;gene=clcB;go_component=membrane|0016020||IEA;go_function=voltage-gated chloride channel activity|0005247||IEA;go_process=chloride transport|0006821||IEA,response to acidic pH|0010447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226787.1;locus_tag=LI478_RS13150;product=voltage-gated ClC-type chloride channel ClcB;protein_id=WP_004148305.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2676746 2677441 . - . ID=gene-LI478_RS13155;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=LI478_RS13155 NZ_CP085478.1 Protein Homology CDS 2676746 2677441 . - 0 ID=cds-WP_021313854.1;Parent=gene-LI478_RS13155;Dbxref=Genbank:WP_021313854.1;Name=WP_021313854.1;Ontology_term=GO:0009102,GO:0004141;gbkey=CDS;gene=bioD;go_function=dethiobiotin synthase activity|0004141||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460449.1;locus_tag=LI478_RS13155;product=dethiobiotin synthase;protein_id=WP_021313854.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2677569 2678789 . - . ID=gene-LI478_RS13160;Name=LI478_RS13160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13160 NZ_CP085478.1 Protein Homology CDS 2677569 2678789 . - 0 ID=cds-WP_002903701.1;Parent=gene-LI478_RS13160;Dbxref=Genbank:WP_002903701.1;Name=WP_002903701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310327.1;locus_tag=LI478_RS13160;product=ROK family transcriptional regulator;protein_id=WP_002903701.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2678913 2679815 . - . ID=gene-LI478_RS13165;Name=LI478_RS13165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13165 NZ_CP085478.1 Protein Homology CDS 2678913 2679815 . - 0 ID=cds-WP_002903700.1;Parent=gene-LI478_RS13165;Dbxref=Genbank:WP_002903700.1;Name=WP_002903700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226784.1;locus_tag=LI478_RS13165;product=LysR family transcriptional regulator;protein_id=WP_002903700.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2679946 2681196 . + . ID=gene-LI478_RS13170;Name=LI478_RS13170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13170 NZ_CP085478.1 Protein Homology CDS 2679946 2681196 . + 0 ID=cds-WP_102007313.1;Parent=gene-LI478_RS13170;Dbxref=Genbank:WP_102007313.1;Name=WP_102007313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226783.1;locus_tag=LI478_RS13170;product=MFS transporter;protein_id=WP_102007313.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2681227 2681319 . - . ID=gene-LI478_RS13175;Name=LI478_RS13175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13175 NZ_CP085478.1 Protein Homology CDS 2681227 2681319 . - 0 ID=cds-WP_004206050.1;Parent=gene-LI478_RS13175;Dbxref=Genbank:WP_004206050.1;Name=WP_004206050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004206050.1;locus_tag=LI478_RS13175;product=hypothetical protein;protein_id=WP_004206050.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2681536 2683023 . + . ID=gene-LI478_RS13180;Name=LI478_RS13180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13180 NZ_CP085478.1 Protein Homology CDS 2681536 2683023 . + 0 ID=cds-WP_004176294.1;Parent=gene-LI478_RS13180;Dbxref=Genbank:WP_004176294.1;Name=WP_004176294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004209775.1;locus_tag=LI478_RS13180;product=carboxypeptidase M32;protein_id=WP_004176294.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2683188 2683607 . + . ID=gene-LI478_RS13185;Name=asr;gbkey=Gene;gene=asr;gene_biotype=protein_coding;locus_tag=LI478_RS13185 NZ_CP085478.1 Protein Homology CDS 2683188 2683607 . + 0 ID=cds-WP_002903693.1;Parent=gene-LI478_RS13185;Dbxref=Genbank:WP_002903693.1;Name=WP_002903693.1;gbkey=CDS;gene=asr;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226780.1;locus_tag=LI478_RS13185;product=acid resistance repetitive basic protein Asr;protein_id=WP_002903693.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2684546 2685358 . + . ID=gene-LI478_RS13190;Name=LI478_RS13190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13190 NZ_CP085478.1 Protein Homology CDS 2684546 2685358 . + 0 ID=cds-WP_002903687.1;Parent=gene-LI478_RS13190;Dbxref=Genbank:WP_002903687.1;Name=WP_002903687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226777.1;locus_tag=LI478_RS13190;product=serine protease;protein_id=WP_002903687.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2685372 2685488 . + . ID=gene-LI478_RS13195;Name=LI478_RS13195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13195 NZ_CP085478.1 Protein Homology CDS 2685372 2685488 . + 0 ID=cds-WP_002903685.1;Parent=gene-LI478_RS13195;Dbxref=Genbank:WP_002903685.1;Name=WP_002903685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226776.1;locus_tag=LI478_RS13195;product=hypothetical protein;protein_id=WP_002903685.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2685532 2685861 . - . ID=gene-LI478_RS13200;Name=kpnF;gbkey=Gene;gene=kpnF;gene_biotype=protein_coding;locus_tag=LI478_RS13200 NZ_CP085478.1 Protein Homology CDS 2685532 2685861 . - 0 ID=cds-WP_002903683.1;Parent=gene-LI478_RS13200;Dbxref=Genbank:WP_002903683.1;Name=WP_002903683.1;gbkey=CDS;gene=kpnF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226775.1;locus_tag=LI478_RS13200;product=multidrug efflux SMR transporter subunit KpnF;protein_id=WP_002903683.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2685848 2686210 . - . ID=gene-LI478_RS13205;Name=kpnE;gbkey=Gene;gene=kpnE;gene_biotype=protein_coding;locus_tag=LI478_RS13205 NZ_CP085478.1 Protein Homology CDS 2685848 2686210 . - 0 ID=cds-WP_002903681.1;Parent=gene-LI478_RS13205;Dbxref=Genbank:WP_002903681.1;Name=WP_002903681.1;gbkey=CDS;gene=kpnE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226774.1;locus_tag=LI478_RS13205;product=multidrug efflux SMR transporter subunit KpnE;protein_id=WP_002903681.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2686653 2687687 . + . ID=gene-LI478_RS13210;Name=LI478_RS13210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13210 NZ_CP085478.1 Protein Homology CDS 2686653 2687687 . + 0 ID=cds-WP_002903679.1;Parent=gene-LI478_RS13210;Dbxref=Genbank:WP_002903679.1;Name=WP_002903679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460441.1;locus_tag=LI478_RS13210;product=AI-2E family transporter;protein_id=WP_002903679.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2687912 2689567 . + . ID=gene-LI478_RS13215;Name=mdcA;gbkey=Gene;gene=mdcA;gene_biotype=protein_coding;locus_tag=LI478_RS13215 NZ_CP085478.1 Protein Homology CDS 2687912 2689567 . + 0 ID=cds-WP_004176297.1;Parent=gene-LI478_RS13215;Dbxref=Genbank:WP_004176297.1;Name=WP_004176297.1;Ontology_term=GO:0006810,GO:0015451;gbkey=CDS;gene=mdcA;go_function=decarboxylation-driven active transmembrane transporter activity|0015451||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226772.1;locus_tag=LI478_RS13215;product=malonate decarboxylase subunit alpha;protein_id=WP_004176297.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2689567 2690409 . + . ID=gene-LI478_RS13220;Name=LI478_RS13220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13220 NZ_CP085478.1 Protein Homology CDS 2689567 2690409 . + 0 ID=cds-WP_227394140.1;Parent=gene-LI478_RS13220;Dbxref=Genbank:WP_227394140.1;Name=WP_227394140.1;Ontology_term=GO:0016310,GO:0005524,GO:0046917;gbkey=CDS;go_function=ATP binding|0005524||IEA,triphosphoribosyl-dephospho-CoA synthase activity|0046917||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226771.1;locus_tag=LI478_RS13220;product=triphosphoribosyl-dephospho-CoA synthase;protein_id=WP_227394140.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2690427 2690726 . + . ID=gene-LI478_RS13225;Name=mdcC;gbkey=Gene;gene=mdcC;gene_biotype=protein_coding;locus_tag=LI478_RS13225 NZ_CP085478.1 Protein Homology CDS 2690427 2690726 . + 0 ID=cds-WP_004143106.1;Parent=gene-LI478_RS13225;Dbxref=Genbank:WP_004143106.1;Name=WP_004143106.1;gbkey=CDS;gene=mdcC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226770.1;locus_tag=LI478_RS13225;product=malonate decarboxylase acyl carrier protein;protein_id=WP_004143106.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2690719 2691552 . + . ID=gene-LI478_RS13230;Name=LI478_RS13230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13230 NZ_CP085478.1 Protein Homology CDS 2690719 2691552 . + 0 ID=cds-WP_004143105.1;Parent=gene-LI478_RS13230;Dbxref=Genbank:WP_004143105.1;Name=WP_004143105.1;Ontology_term=GO:0006633,GO:0044262,GO:0003989,GO:0016831,GO:0009317;gbkey=CDS;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA,carboxy-lyase activity|0016831||IEA;go_process=fatty acid biosynthetic process|0006633||IEA,cellular carbohydrate metabolic process|0044262||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226769.1;locus_tag=LI478_RS13230;product=biotin-independent malonate decarboxylase subunit beta;protein_id=WP_004143105.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2691552 2692352 . + . ID=gene-LI478_RS13235;Name=mdcE;gbkey=Gene;gene=mdcE;gene_biotype=protein_coding;locus_tag=LI478_RS13235 NZ_CP085478.1 Protein Homology CDS 2691552 2692352 . + 0 ID=cds-WP_004224637.1;Parent=gene-LI478_RS13235;Dbxref=Genbank:WP_004224637.1;Name=WP_004224637.1;Ontology_term=GO:0044262;gbkey=CDS;gene=mdcE;go_process=cellular carbohydrate metabolic process|0044262||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226768.1;locus_tag=LI478_RS13235;product=biotin-independent malonate decarboxylase subunit gamma;protein_id=WP_004224637.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2692489 2693448 . + . ID=gene-LI478_RS13240;Name=LI478_RS13240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13240 NZ_CP085478.1 Protein Homology CDS 2692489 2693448 . + 0 ID=cds-WP_004148291.1;Parent=gene-LI478_RS13240;Dbxref=Genbank:WP_004148291.1;Name=WP_004148291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226767.1;locus_tag=LI478_RS13240;product=AEC family transporter;protein_id=WP_004148291.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2693452 2694069 . + . ID=gene-LI478_RS13245;Name=LI478_RS13245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13245 NZ_CP085478.1 Protein Homology CDS 2693452 2694069 . + 0 ID=cds-WP_064153575.1;Parent=gene-LI478_RS13245;Dbxref=Genbank:WP_064153575.1;Name=WP_064153575.1;Ontology_term=GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226766.1;locus_tag=LI478_RS13245;product=malonate decarboxylase holo-ACP synthase;protein_id=WP_064153575.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2694069 2694971 . + . ID=gene-LI478_RS13250;Name=mdcH;gbkey=Gene;gene=mdcH;gene_biotype=protein_coding;locus_tag=LI478_RS13250 NZ_CP085478.1 Protein Homology CDS 2694069 2694971 . + 0 ID=cds-WP_064153573.1;Parent=gene-LI478_RS13250;Dbxref=Genbank:WP_064153573.1;Name=WP_064153573.1;Ontology_term=GO:0016740;gbkey=CDS;gene=mdcH;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226765.1;locus_tag=LI478_RS13250;product=malonate decarboxylase subunit epsilon;protein_id=WP_064153573.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2694961 2695887 . - . ID=gene-LI478_RS13255;Name=LI478_RS13255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13255 NZ_CP085478.1 Protein Homology CDS 2694961 2695887 . - 0 ID=cds-WP_064153571.1;Parent=gene-LI478_RS13255;Dbxref=Genbank:WP_064153571.1;Name=WP_064153571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226764.1;locus_tag=LI478_RS13255;product=LysR substrate-binding domain-containing protein;protein_id=WP_064153571.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2696045 2697655 . - . ID=gene-LI478_RS13260;Name=mqo;gbkey=Gene;gene=mqo;gene_biotype=protein_coding;locus_tag=LI478_RS13260 NZ_CP085478.1 Protein Homology CDS 2696045 2697655 . - 0 ID=cds-WP_076750587.1;Parent=gene-LI478_RS13260;Dbxref=Genbank:WP_076750587.1;Name=WP_076750587.1;Ontology_term=GO:0006099,GO:0008924;gbkey=CDS;gene=mqo;go_function=malate dehydrogenase (quinone) activity|0008924||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226763.1;locus_tag=LI478_RS13260;product=malate dehydrogenase (quinone);protein_id=WP_076750587.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2697964 2698884 . - . ID=gene-LI478_RS13265;Name=LI478_RS13265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13265 NZ_CP085478.1 Protein Homology CDS 2697964 2698884 . - 0 ID=cds-WP_021313862.1;Parent=gene-LI478_RS13265;Dbxref=Genbank:WP_021313862.1;Name=WP_021313862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226762.1;locus_tag=LI478_RS13265;product=N-acetylmuramic acid 6-phosphate etherase;protein_id=WP_021313862.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2699048 2699404 . - . ID=gene-LI478_RS13270;Name=LI478_RS13270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13270 NZ_CP085478.1 GeneMarkS-2+ CDS 2699048 2699404 . - 0 ID=cds-WP_016529947.1;Parent=gene-LI478_RS13270;Dbxref=Genbank:WP_016529947.1;Name=WP_016529947.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LI478_RS13270;product=hypothetical protein;protein_id=WP_016529947.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2699560 2701176 . + . ID=gene-LI478_RS13275;Name=LI478_RS13275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13275 NZ_CP085478.1 Protein Homology CDS 2699560 2701176 . + 0 ID=cds-WP_021313863.1;Parent=gene-LI478_RS13275;Dbxref=Genbank:WP_021313863.1;Name=WP_021313863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009308938.1;locus_tag=LI478_RS13275;product=sensor histidine kinase;protein_id=WP_021313863.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2701173 2701892 . + . ID=gene-LI478_RS13280;Name=dcuR;gbkey=Gene;gene=dcuR;gene_biotype=protein_coding;locus_tag=LI478_RS13280 NZ_CP085478.1 Protein Homology CDS 2701173 2701892 . + 0 ID=cds-WP_004176303.1;Parent=gene-LI478_RS13280;Dbxref=Genbank:WP_004176303.1;Name=WP_004176303.1;Ontology_term=GO:0000160,GO:0003700;gbkey=CDS;gene=dcuR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226759.1;locus_tag=LI478_RS13280;product=two-component system response regulator DcuR;protein_id=WP_004176303.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2701873 2702823 . - . ID=gene-LI478_RS13285;Name=LI478_RS13285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13285 NZ_CP085478.1 Protein Homology CDS 2701873 2702823 . - 0 ID=cds-WP_004143085.1;Parent=gene-LI478_RS13285;Dbxref=Genbank:WP_004143085.1;Name=WP_004143085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226758.1;locus_tag=LI478_RS13285;product=FAD:protein FMN transferase;protein_id=WP_004143085.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2702891 2705668 . - . ID=gene-LI478_RS13290;Name=LI478_RS13290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13290 NZ_CP085478.1 Protein Homology CDS 2702891 2705668 . - 0 ID=cds-WP_004179710.1;Parent=gene-LI478_RS13290;Dbxref=Genbank:WP_004179710.1;Name=WP_004179710.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016946652.1;locus_tag=LI478_RS13290;product=flavocytochrome c;protein_id=WP_004179710.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2706310 2707821 . + . ID=gene-LI478_RS13295;Name=LI478_RS13295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13295 NZ_CP085478.1 Protein Homology CDS 2706310 2707821 . + 0 ID=cds-WP_004148278.1;Parent=gene-LI478_RS13295;Dbxref=Genbank:WP_004148278.1;Name=WP_004148278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012968326.1;locus_tag=LI478_RS13295;product=anion permease;protein_id=WP_004148278.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2707876 2709528 . + . ID=gene-LI478_RS13300;Name=fumA;gbkey=Gene;gene=fumA;gene_biotype=protein_coding;locus_tag=LI478_RS13300 NZ_CP085478.1 Protein Homology CDS 2707876 2709528 . + 0 ID=cds-WP_004152246.1;Parent=gene-LI478_RS13300;Dbxref=Genbank:WP_004152246.1;Name=WP_004152246.1;gbkey=CDS;gene=fumA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226753.1;locus_tag=LI478_RS13300;product=class I fumarate hydratase FumA;protein_id=WP_004152246.1;transl_table=11 NZ_CP085478.1 RefSeq pseudogene 2709692 2711308 . + . ID=gene-LI478_RS13305;Name=LI478_RS13305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS13305;pseudo=true NZ_CP085478.1 Protein Homology CDS 2709692 2711308 . + 0 ID=cds-LI478_RS13305;Parent=gene-LI478_RS13305;Note=internal stop;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226752.1;locus_tag=LI478_RS13305;product=mechanosensitive ion channel;pseudo=true;transl_table=11 NZ_CP085478.1 RefSeq gene 2713591 2713980 . - . ID=gene-LI478_RS13310;Name=pcaC;gbkey=Gene;gene=pcaC;gene_biotype=protein_coding;locus_tag=LI478_RS13310 NZ_CP085478.1 Protein Homology CDS 2713591 2713980 . - 0 ID=cds-WP_004143067.1;Parent=gene-LI478_RS13310;Dbxref=Genbank:WP_004143067.1;Name=WP_004143067.1;Ontology_term=GO:0047575;gbkey=CDS;gene=pcaC;go_function=4-carboxymuconolactone decarboxylase activity|0047575||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226751.1;locus_tag=LI478_RS13310;product=4-carboxymuconolactone decarboxylase;protein_id=WP_004143067.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2713973 2714737 . - . ID=gene-LI478_RS13315;Name=pcaD;gbkey=Gene;gene=pcaD;gene_biotype=protein_coding;locus_tag=LI478_RS13315 NZ_CP085478.1 Protein Homology CDS 2713973 2714737 . - 0 ID=cds-WP_004151556.1;Parent=gene-LI478_RS13315;Dbxref=Genbank:WP_004151556.1;Name=WP_004151556.1;Ontology_term=GO:0042952,GO:0047570;gbkey=CDS;gene=pcaD;go_function=3-oxoadipate enol-lactonase activity|0047570||IEA;go_process=beta-ketoadipate pathway|0042952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226750.1;locus_tag=LI478_RS13315;product=3-oxoadipate enol-lactonase;protein_id=WP_004151556.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2714727 2716079 . - . ID=gene-LI478_RS13320;Name=LI478_RS13320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13320 NZ_CP085478.1 Protein Homology CDS 2714727 2716079 . - 0 ID=cds-WP_004151557.1;Parent=gene-LI478_RS13320;Dbxref=Genbank:WP_004151557.1;Name=WP_004151557.1;Ontology_term=GO:0019619,GO:0047472;gbkey=CDS;go_function=3-carboxy-cis%2Ccis-muconate cycloisomerase activity|0047472||IEA;go_process=3%2C4-dihydroxybenzoate catabolic process|0019619||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226749.1;locus_tag=LI478_RS13320;product=3-carboxy-cis%2Ccis-muconate cycloisomerase;protein_id=WP_004151557.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2716089 2717291 . - . ID=gene-LI478_RS13325;Name=pcaF;gbkey=Gene;gene=pcaF;gene_biotype=protein_coding;locus_tag=LI478_RS13325 NZ_CP085478.1 Protein Homology CDS 2716089 2717291 . - 0 ID=cds-WP_064153568.1;Parent=gene-LI478_RS13325;Dbxref=Genbank:WP_064153568.1;Name=WP_064153568.1;Ontology_term=GO:0019619,GO:0016747;gbkey=CDS;gene=pcaF;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=3%2C4-dihydroxybenzoate catabolic process|0019619||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226748.1;locus_tag=LI478_RS13325;product=3-oxoadipyl-CoA thiolase;protein_id=WP_064153568.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2717302 2717958 . - . ID=gene-LI478_RS13330;Name=LI478_RS13330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13330 NZ_CP085478.1 Protein Homology CDS 2717302 2717958 . - 0 ID=cds-WP_004151559.1;Parent=gene-LI478_RS13330;Dbxref=Genbank:WP_004151559.1;Name=WP_004151559.1;Ontology_term=GO:0008410;gbkey=CDS;go_function=CoA-transferase activity|0008410||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226747.1;locus_tag=LI478_RS13330;product=3-oxoacid CoA-transferase subunit B;protein_id=WP_004151559.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2717969 2718655 . - . ID=gene-LI478_RS13335;Name=LI478_RS13335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13335 NZ_CP085478.1 Protein Homology CDS 2717969 2718655 . - 0 ID=cds-WP_002903522.1;Parent=gene-LI478_RS13335;Dbxref=Genbank:WP_002903522.1;Name=WP_002903522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226746.1;locus_tag=LI478_RS13335;product=3-oxoacid CoA-transferase subunit A;protein_id=WP_002903522.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2718825 2719631 . + . ID=gene-LI478_RS13340;Name=LI478_RS13340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13340 NZ_CP085478.1 Protein Homology CDS 2718825 2719631 . + 0 ID=cds-WP_004151560.1;Parent=gene-LI478_RS13340;Dbxref=Genbank:WP_004151560.1;Name=WP_004151560.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226745.1;locus_tag=LI478_RS13340;product=helix-turn-helix domain-containing protein;protein_id=WP_004151560.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2719628 2720191 . - . ID=gene-LI478_RS13345;Name=smrA;gbkey=Gene;gene=smrA;gene_biotype=protein_coding;locus_tag=LI478_RS13345 NZ_CP085478.1 Protein Homology CDS 2719628 2720191 . - 0 ID=cds-WP_004143055.1;Parent=gene-LI478_RS13345;Dbxref=Genbank:WP_004143055.1;Name=WP_004143055.1;gbkey=CDS;gene=smrA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226744.1;locus_tag=LI478_RS13345;product=DNA endonuclease SmrA;protein_id=WP_004143055.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2720293 2721201 . - . ID=gene-LI478_RS13350;Name=LI478_RS13350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13350 NZ_CP085478.1 Protein Homology CDS 2720293 2721201 . - 0 ID=cds-WP_004148273.1;Parent=gene-LI478_RS13350;Dbxref=Genbank:WP_004148273.1;Name=WP_004148273.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226743.1;locus_tag=LI478_RS13350;product=LysR family transcriptional regulator;protein_id=WP_004148273.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2721368 2722678 . + . ID=gene-LI478_RS13355;Name=LI478_RS13355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13355 NZ_CP085478.1 Protein Homology CDS 2721368 2722678 . + 0 ID=cds-WP_015958358.1;Parent=gene-LI478_RS13355;Dbxref=Genbank:WP_015958358.1;Name=WP_015958358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226742.1;locus_tag=LI478_RS13355;product=M20 family metallo-hydrolase;protein_id=WP_015958358.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2722678 2724123 . + . ID=gene-LI478_RS13360;Name=LI478_RS13360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13360 NZ_CP085478.1 Protein Homology CDS 2722678 2724123 . + 0 ID=cds-WP_004176321.1;Parent=gene-LI478_RS13360;Dbxref=Genbank:WP_004176321.1;Name=WP_004176321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226741.1;locus_tag=LI478_RS13360;product=M20 family metallopeptidase;protein_id=WP_004176321.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2724243 2725769 . + . ID=gene-LI478_RS13365;Name=abgT;gbkey=Gene;gene=abgT;gene_biotype=protein_coding;locus_tag=LI478_RS13365 NZ_CP085478.1 Protein Homology CDS 2724243 2725769 . + 0 ID=cds-WP_002903400.1;Parent=gene-LI478_RS13365;Dbxref=Genbank:WP_002903400.1;Name=WP_002903400.1;gbkey=CDS;gene=abgT;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226740.1;locus_tag=LI478_RS13365;product=p-aminobenzoyl-glutamate transporter;protein_id=WP_002903400.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2725802 2725960 . - . ID=gene-LI478_RS13370;Name=LI478_RS13370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13370 NZ_CP085478.1 Protein Homology CDS 2725802 2725960 . - 0 ID=cds-WP_002903398.1;Parent=gene-LI478_RS13370;Dbxref=Genbank:WP_002903398.1;Name=WP_002903398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226739.1;locus_tag=LI478_RS13370;product=hypothetical protein;protein_id=WP_002903398.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2726253 2726768 . + . ID=gene-LI478_RS13375;Name=ogt;gbkey=Gene;gene=ogt;gene_biotype=protein_coding;locus_tag=LI478_RS13375 NZ_CP085478.1 Protein Homology CDS 2726253 2726768 . + 0 ID=cds-WP_004224598.1;Parent=gene-LI478_RS13375;Dbxref=Genbank:WP_004224598.1;Name=WP_004224598.1;Ontology_term=GO:0006281,GO:0003908;gbkey=CDS;gene=ogt;go_function=methylated-DNA-[protein]-cysteine S-methyltransferase activity|0003908||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226738.1;locus_tag=LI478_RS13375;product=methylated-DNA--[protein]-cysteine S-methyltransferase;protein_id=WP_004224598.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2726963 2727715 . + . ID=gene-LI478_RS13380;Name=fnr;gbkey=Gene;gene=fnr;gene_biotype=protein_coding;locus_tag=LI478_RS13380 NZ_CP085478.1 Protein Homology CDS 2726963 2727715 . + 0 ID=cds-WP_002903394.1;Parent=gene-LI478_RS13380;Dbxref=Genbank:WP_002903394.1;Name=WP_002903394.1;gbkey=CDS;gene=fnr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007849744.1;locus_tag=LI478_RS13380;product=fumarate/nitrate reduction transcriptional regulator Fnr;protein_id=WP_002903394.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2727854 2728804 . + . ID=gene-LI478_RS13385;Name=uspE;gbkey=Gene;gene=uspE;gene_biotype=protein_coding;locus_tag=LI478_RS13385 NZ_CP085478.1 Protein Homology CDS 2727854 2728804 . + 0 ID=cds-WP_002903391.1;Parent=gene-LI478_RS13385;Dbxref=Genbank:WP_002903391.1;Name=WP_002903391.1;gbkey=CDS;gene=uspE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226736.1;locus_tag=LI478_RS13385;product=universal stress protein UspE;protein_id=WP_002903391.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2728914 2729102 . - . ID=gene-LI478_RS13390;Name=LI478_RS13390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13390 NZ_CP085478.1 Protein Homology CDS 2728914 2729102 . - 0 ID=cds-WP_002903388.1;Parent=gene-LI478_RS13390;Dbxref=Genbank:WP_002903388.1;Name=WP_002903388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226735.1;locus_tag=LI478_RS13390;product=hypothetical protein;protein_id=WP_002903388.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2729251 2730639 . - . ID=gene-LI478_RS13395;Name=pntB;gbkey=Gene;gene=pntB;gene_biotype=protein_coding;locus_tag=LI478_RS13395 NZ_CP085478.1 Protein Homology CDS 2729251 2730639 . - 0 ID=cds-WP_002903386.1;Parent=gene-LI478_RS13395;Dbxref=Genbank:WP_002903386.1;Name=WP_002903386.1;Ontology_term=GO:0008750,GO:0050661,GO:0016020;gbkey=CDS;gene=pntB;go_component=membrane|0016020||IEA;go_function=NAD(P)+ transhydrogenase (AB-specific) activity|0008750||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000014033.1;locus_tag=LI478_RS13395;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit beta;protein_id=WP_002903386.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2730650 2732179 . - . ID=gene-LI478_RS13400;Name=pntA;gbkey=Gene;gene=pntA;gene_biotype=protein_coding;locus_tag=LI478_RS13400 NZ_CP085478.1 Protein Homology CDS 2730650 2732179 . - 0 ID=cds-WP_004148265.1;Parent=gene-LI478_RS13400;Dbxref=Genbank:WP_004148265.1;Name=WP_004148265.1;Ontology_term=GO:0008750;gbkey=CDS;gene=pntA;go_function=NAD(P)+ transhydrogenase (AB-specific) activity|0008750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226733.1;locus_tag=LI478_RS13400;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha;protein_id=WP_004148265.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2732522 2732704 . + . ID=gene-LI478_RS13405;Name=LI478_RS13405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13405 NZ_CP085478.1 Protein Homology CDS 2732522 2732704 . + 0 ID=cds-WP_004140012.1;Parent=gene-LI478_RS13405;Dbxref=Genbank:WP_004140012.1;Name=WP_004140012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226730.1;locus_tag=LI478_RS13405;product=hypothetical protein;protein_id=WP_004140012.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2732701 2733651 . + . ID=gene-LI478_RS13410;Name=ydgH;gbkey=Gene;gene=ydgH;gene_biotype=protein_coding;locus_tag=LI478_RS13410 NZ_CP085478.1 Protein Homology CDS 2732701 2733651 . + 0 ID=cds-WP_002903384.1;Parent=gene-LI478_RS13410;Dbxref=Genbank:WP_002903384.1;Name=WP_002903384.1;gbkey=CDS;gene=ydgH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226729.1;locus_tag=LI478_RS13410;product=DUF1471 family protein YdgH;protein_id=WP_002903384.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2733829 2735211 . + . ID=gene-LI478_RS13415;Name=LI478_RS13415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13415 NZ_CP085478.1 Protein Homology CDS 2733829 2735211 . + 0 ID=cds-WP_004183892.1;Parent=gene-LI478_RS13415;Dbxref=Genbank:WP_004183892.1;Name=WP_004183892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416122.1;locus_tag=LI478_RS13415;product=amino acid permease;protein_id=WP_004183892.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2735248 2735970 . + . ID=gene-LI478_RS13420;Name=folM;gbkey=Gene;gene=folM;gene_biotype=protein_coding;locus_tag=LI478_RS13420 NZ_CP085478.1 Protein Homology CDS 2735248 2735970 . + 0 ID=cds-WP_004176334.1;Parent=gene-LI478_RS13420;Dbxref=Genbank:WP_004176334.1;Name=WP_004176334.1;Ontology_term=GO:0016491;gbkey=CDS;gene=folM;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226727.1;locus_tag=LI478_RS13420;product=dihydromonapterin reductase;protein_id=WP_004176334.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2735967 2736302 . - . ID=gene-LI478_RS13425;Name=LI478_RS13425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13425 NZ_CP085478.1 Protein Homology CDS 2735967 2736302 . - 0 ID=cds-WP_002903379.1;Parent=gene-LI478_RS13425;Dbxref=Genbank:WP_002903379.1;Name=WP_002903379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226726.1;locus_tag=LI478_RS13425;product=GlpM family protein;protein_id=WP_002903379.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2736431 2737150 . + . ID=gene-LI478_RS13430;Name=rstA;gbkey=Gene;gene=rstA;gene_biotype=protein_coding;locus_tag=LI478_RS13430 NZ_CP085478.1 Protein Homology CDS 2736431 2737150 . + 0 ID=cds-WP_002903377.1;Parent=gene-LI478_RS13430;Dbxref=Genbank:WP_002903377.1;Name=WP_002903377.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=rstA;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226725.1;locus_tag=LI478_RS13430;product=two-component system response regulator RstA;protein_id=WP_002903377.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2737393 2737755 . + . ID=gene-LI478_RS13435;Name=LI478_RS13435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13435 NZ_CP085478.1 Protein Homology CDS 2737393 2737755 . + 0 ID=cds-WP_002903374.1;Parent=gene-LI478_RS13435;Dbxref=Genbank:WP_002903374.1;Name=WP_002903374.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226724.1;locus_tag=LI478_RS13435;product=hypothetical protein;protein_id=WP_002903374.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2738012 2739313 . + . ID=gene-LI478_RS13440;Name=rstB;gbkey=Gene;gene=rstB;gene_biotype=protein_coding;locus_tag=LI478_RS13440 NZ_CP085478.1 Protein Homology CDS 2738012 2739313 . + 0 ID=cds-WP_004151564.1;Parent=gene-LI478_RS13440;Dbxref=Genbank:WP_004151564.1;Name=WP_004151564.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=rstB;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226723.1;locus_tag=LI478_RS13440;product=two-component system sensor histidine kinase RstB;protein_id=WP_004151564.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2739389 2740321 . + . ID=gene-LI478_RS13445;Name=tus;gbkey=Gene;gene=tus;gene_biotype=protein_coding;locus_tag=LI478_RS13445 NZ_CP085478.1 Protein Homology CDS 2739389 2740321 . + 0 ID=cds-WP_004148259.1;Parent=gene-LI478_RS13445;Dbxref=Genbank:WP_004148259.1;Name=WP_004148259.1;Ontology_term=GO:0006274,GO:0003677;gbkey=CDS;gene=tus;go_function=DNA binding|0003677||IEA;go_process=DNA replication termination|0006274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226722.1;locus_tag=LI478_RS13445;product=DNA replication terminus site-binding protein;protein_id=WP_004148259.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2740311 2741711 . - . ID=gene-LI478_RS13450;Name=fumC;gbkey=Gene;gene=fumC;gene_biotype=protein_coding;locus_tag=LI478_RS13450 NZ_CP085478.1 Protein Homology CDS 2740311 2741711 . - 0 ID=cds-WP_002903315.1;Parent=gene-LI478_RS13450;Dbxref=Genbank:WP_002903315.1;Name=WP_002903315.1;Ontology_term=GO:0006099,GO:0004333;gbkey=CDS;gene=fumC;go_function=fumarate hydratase activity|0004333||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226721.1;locus_tag=LI478_RS13450;product=class II fumarate hydratase;protein_id=WP_002903315.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2742051 2743697 . - . ID=gene-LI478_RS13455;Name=fumA;gbkey=Gene;gene=fumA;gene_biotype=protein_coding;locus_tag=LI478_RS13455 NZ_CP085478.1 Protein Homology CDS 2742051 2743697 . - 0 ID=cds-WP_002903313.1;Parent=gene-LI478_RS13455;Dbxref=Genbank:WP_002903313.1;Name=WP_002903313.1;gbkey=CDS;gene=fumA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226720.1;locus_tag=LI478_RS13455;product=class I fumarate hydratase FumA;protein_id=WP_002903313.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2743899 2745077 . + . ID=gene-LI478_RS13460;Name=manA;gbkey=Gene;gene=manA;gene_biotype=protein_coding;locus_tag=LI478_RS13460 NZ_CP085478.1 Protein Homology CDS 2743899 2745077 . + 0 ID=cds-WP_002903312.1;Parent=gene-LI478_RS13460;Dbxref=Genbank:WP_002903312.1;Name=WP_002903312.1;Ontology_term=GO:0009298,GO:0004476,GO:0008270;gbkey=CDS;gene=manA;go_function=mannose-6-phosphate isomerase activity|0004476||IEA,zinc ion binding|0008270||IEA;go_process=GDP-mannose biosynthetic process|0009298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226719.1;locus_tag=LI478_RS13460;product=mannose-6-phosphate isomerase;protein_id=WP_002903312.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2745164 2746723 . + . ID=gene-LI478_RS13465;Name=LI478_RS13465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13465 NZ_CP085478.1 Protein Homology CDS 2745164 2746723 . + 0 ID=cds-WP_064145602.1;Parent=gene-LI478_RS13465;Dbxref=Genbank:WP_064145602.1;Name=WP_064145602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226718.1;locus_tag=LI478_RS13465;product=YdgA family protein;protein_id=WP_064145602.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2746763 2747791 . - . ID=gene-LI478_RS13470;Name=LI478_RS13470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13470 NZ_CP085478.1 Protein Homology CDS 2746763 2747791 . - 0 ID=cds-WP_004148253.1;Parent=gene-LI478_RS13470;Dbxref=Genbank:WP_004148253.1;Name=WP_004148253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226717.1;locus_tag=LI478_RS13470;product=Mal regulon transcriptional regulator MalI;protein_id=WP_004148253.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2747964 2749556 . + . ID=gene-LI478_RS13475;Name=malX;gbkey=Gene;gene=malX;gene_biotype=protein_coding;locus_tag=LI478_RS13475 NZ_CP085478.1 Protein Homology CDS 2747964 2749556 . + 0 ID=cds-WP_002903245.1;Parent=gene-LI478_RS13475;Dbxref=Genbank:WP_002903245.1;Name=WP_002903245.1;Ontology_term=GO:0005355,GO:0005363;gbkey=CDS;gene=malX;go_function=glucose transmembrane transporter activity|0005355||IEA,maltose transmembrane transporter activity|0005363||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226716.1;locus_tag=LI478_RS13475;product=maltose/glucose-specific PTS transporter subunit IIBC;protein_id=WP_002903245.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2749608 2750780 . + . ID=gene-LI478_RS13480;Name=LI478_RS13480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13480 NZ_CP085478.1 Protein Homology CDS 2749608 2750780 . + 0 ID=cds-WP_009308961.1;Parent=gene-LI478_RS13480;Dbxref=Genbank:WP_009308961.1;Name=WP_009308961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226715.1;locus_tag=LI478_RS13480;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_009308961.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2750794 2751822 . - . ID=gene-LI478_RS13485;Name=LI478_RS13485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13485 NZ_CP085478.1 Protein Homology CDS 2750794 2751822 . - 0 ID=cds-WP_004179669.1;Parent=gene-LI478_RS13485;Dbxref=Genbank:WP_004179669.1;Name=WP_004179669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226714.1;locus_tag=LI478_RS13485;product=magnesium transporter CorA;protein_id=WP_004179669.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2752134 2752337 . + . ID=gene-LI478_RS13490;Name=ydfZ;gbkey=Gene;gene=ydfZ;gene_biotype=protein_coding;locus_tag=LI478_RS13490 NZ_CP085478.1 Protein Homology CDS 2752134 2752337 . + 0 ID=cds-WP_004151566.1;Parent=gene-LI478_RS13490;Dbxref=Genbank:WP_004151566.1;Name=WP_004151566.1;gbkey=CDS;gene=ydfZ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226713.1;locus_tag=LI478_RS13490;product=putative selenium delivery protein YdfZ;protein_id=WP_004151566.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2752407 2752886 . - . ID=gene-LI478_RS13495;Name=LI478_RS13495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13495 NZ_CP085478.1 Protein Homology CDS 2752407 2752886 . - 0 ID=cds-WP_072202360.1;Parent=gene-LI478_RS13495;Dbxref=Genbank:WP_072202360.1;Name=WP_072202360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226712.1;locus_tag=LI478_RS13495;product=hypothetical protein;protein_id=WP_072202360.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2753123 2753476 . + . ID=gene-LI478_RS13500;Name=LI478_RS13500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13500 NZ_CP085478.1 Protein Homology CDS 2753123 2753476 . + 0 ID=cds-WP_002903236.1;Parent=gene-LI478_RS13500;Dbxref=Genbank:WP_002903236.1;Name=WP_002903236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226711.1;locus_tag=LI478_RS13500;product=DUF1304 domain-containing protein;protein_id=WP_002903236.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2753580 2754788 . + . ID=gene-LI478_RS13505;Name=yedE;gbkey=Gene;gene=yedE;gene_biotype=protein_coding;locus_tag=LI478_RS13505 NZ_CP085478.1 Protein Homology CDS 2753580 2754788 . + 0 ID=cds-WP_002903234.1;Parent=gene-LI478_RS13505;Dbxref=Genbank:WP_002903234.1;Name=WP_002903234.1;gbkey=CDS;gene=yedE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226710.1;locus_tag=LI478_RS13505;product=selenium metabolism membrane protein YedE/FdhT;protein_id=WP_002903234.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2754785 2755018 . + . ID=gene-LI478_RS13510;Name=yedF;gbkey=Gene;gene=yedF;gene_biotype=protein_coding;locus_tag=LI478_RS13510 NZ_CP085478.1 Protein Homology CDS 2754785 2755018 . + 0 ID=cds-WP_002903233.1;Parent=gene-LI478_RS13510;Dbxref=Genbank:WP_002903233.1;Name=WP_002903233.1;gbkey=CDS;gene=yedF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226709.1;locus_tag=LI478_RS13510;product=sulfurtransferase-like selenium metabolism protein YedF;protein_id=WP_002903233.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2755269 2755661 . + . ID=gene-LI478_RS13515;Name=LI478_RS13515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13515 NZ_CP085478.1 Protein Homology CDS 2755269 2755661 . + 0 ID=cds-WP_023285078.1;Parent=gene-LI478_RS13515;Dbxref=Genbank:WP_023285078.1;Name=WP_023285078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226708.1;locus_tag=LI478_RS13515;product=DUF1398 domain-containing protein;protein_id=WP_023285078.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2755696 2755854 . - . ID=gene-LI478_RS13520;Name=LI478_RS13520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13520 NZ_CP085478.1 Protein Homology CDS 2755696 2755854 . - 0 ID=cds-WP_002903230.1;Parent=gene-LI478_RS13520;Dbxref=Genbank:WP_002903230.1;Name=WP_002903230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226707.1;locus_tag=LI478_RS13520;product=YqaE/Pmp3 family membrane protein;protein_id=WP_002903230.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2756137 2757135 . + . ID=gene-LI478_RS13525;Name=gap;gbkey=Gene;gene=gap;gene_biotype=protein_coding;locus_tag=LI478_RS13525 NZ_CP085478.1 Protein Homology CDS 2756137 2757135 . + 0 ID=cds-WP_002903227.1;Parent=gene-LI478_RS13525;Dbxref=Genbank:WP_002903227.1;Name=WP_002903227.1;Ontology_term=GO:0006094,GO:0006096,GO:0019682;gbkey=CDS;gene=gap;go_process=gluconeogenesis|0006094||IEA,glycolytic process|0006096||IEA,glyceraldehyde-3-phosphate metabolic process|0019682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226706.1;locus_tag=LI478_RS13525;product=type I glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_002903227.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2757184 2758623 . - . ID=gene-LI478_RS13530;Name=aldA;gbkey=Gene;gene=aldA;gene_biotype=protein_coding;locus_tag=LI478_RS13530 NZ_CP085478.1 Protein Homology CDS 2757184 2758623 . - 0 ID=cds-WP_004151568.1;Parent=gene-LI478_RS13530;Dbxref=Genbank:WP_004151568.1;Name=WP_004151568.1;Ontology_term=GO:0016620;gbkey=CDS;gene=aldA;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310048.1;locus_tag=LI478_RS13530;product=aldehyde dehydrogenase;protein_id=WP_004151568.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2758622 2758759 . + . ID=gene-LI478_RS13535;Name=LI478_RS13535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13535 NZ_CP085478.1 Protein Homology CDS 2758622 2758759 . + 0 ID=cds-WP_004140057.1;Parent=gene-LI478_RS13535;Dbxref=Genbank:WP_004140057.1;Name=WP_004140057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226703.1;locus_tag=LI478_RS13535;product=hypothetical protein;protein_id=WP_004140057.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2758821 2759621 . - . ID=gene-LI478_RS13540;Name=LI478_RS13540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13540 NZ_CP085478.1 Protein Homology CDS 2758821 2759621 . - 0 ID=cds-WP_020316474.1;Parent=gene-LI478_RS13540;Dbxref=Genbank:WP_020316474.1;Name=WP_020316474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226702.1;locus_tag=LI478_RS13540;product=YdcF family protein;protein_id=WP_020316474.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2760002 2761327 . + . ID=gene-LI478_RS13545;Name=LI478_RS13545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13545 NZ_CP085478.1 Protein Homology CDS 2760002 2761327 . + 0 ID=cds-WP_032417093.1;Parent=gene-LI478_RS13545;Dbxref=Genbank:WP_032417093.1;Name=WP_032417093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226701.1;locus_tag=LI478_RS13545;product=MFS transporter;protein_id=WP_032417093.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2761534 2762964 . - . ID=gene-LI478_RS13550;Name=LI478_RS13550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13550 NZ_CP085478.1 Protein Homology CDS 2761534 2762964 . - 0 ID=cds-WP_002903059.1;Parent=gene-LI478_RS13550;Dbxref=Genbank:WP_002903059.1;Name=WP_002903059.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226700.1;locus_tag=LI478_RS13550;product=amino acid permease;protein_id=WP_002903059.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2762974 2763969 . - . ID=gene-LI478_RS13555;Name=astE;gbkey=Gene;gene=astE;gene_biotype=protein_coding;locus_tag=LI478_RS13555 NZ_CP085478.1 Protein Homology CDS 2762974 2763969 . - 0 ID=cds-WP_032410294.1;Parent=gene-LI478_RS13555;Dbxref=Genbank:WP_032410294.1;Name=WP_032410294.1;Ontology_term=GO:0006527,GO:0009017;gbkey=CDS;gene=astE;go_function=succinylglutamate desuccinylase activity|0009017||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226699.1;locus_tag=LI478_RS13555;product=succinylglutamate desuccinylase;protein_id=WP_032410294.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2763980 2765320 . - . ID=gene-LI478_RS13560;Name=astB;gbkey=Gene;gene=astB;gene_biotype=protein_coding;locus_tag=LI478_RS13560 NZ_CP085478.1 Protein Homology CDS 2763980 2765320 . - 0 ID=cds-WP_004148240.1;Parent=gene-LI478_RS13560;Dbxref=Genbank:WP_004148240.1;Name=WP_004148240.1;Ontology_term=GO:0006527,GO:0009015;gbkey=CDS;gene=astB;go_function=N-succinylarginine dihydrolase activity|0009015||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226698.1;locus_tag=LI478_RS13560;product=N-succinylarginine dihydrolase;protein_id=WP_004148240.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2765342 2766808 . - . ID=gene-LI478_RS13565;Name=astD;gbkey=Gene;gene=astD;gene_biotype=protein_coding;locus_tag=LI478_RS13565 NZ_CP085478.1 Protein Homology CDS 2765342 2766808 . - 0 ID=cds-WP_004210329.1;Parent=gene-LI478_RS13565;Dbxref=Genbank:WP_004210329.1;Name=WP_004210329.1;Ontology_term=GO:0006527,GO:0016620;gbkey=CDS;gene=astD;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226697.1;locus_tag=LI478_RS13565;product=succinylglutamate-semialdehyde dehydrogenase;protein_id=WP_004210329.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2766799 2767821 . - . ID=gene-LI478_RS13570;Name=astA;gbkey=Gene;gene=astA;gene_biotype=protein_coding;locus_tag=LI478_RS13570 NZ_CP085478.1 Protein Homology CDS 2766799 2767821 . - 0 ID=cds-WP_004140076.1;Parent=gene-LI478_RS13570;Dbxref=Genbank:WP_004140076.1;Name=WP_004140076.1;Ontology_term=GO:0006527,GO:0008791;gbkey=CDS;gene=astA;go_function=arginine N-succinyltransferase activity|0008791||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226696.1;locus_tag=LI478_RS13570;product=arginine N-succinyltransferase;protein_id=WP_004140076.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2767840 2769045 . - . ID=gene-LI478_RS13575;Name=LI478_RS13575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13575 NZ_CP085478.1 Protein Homology CDS 2767840 2769045 . - 0 ID=cds-WP_004176366.1;Parent=gene-LI478_RS13575;Dbxref=Genbank:WP_004176366.1;Name=WP_004176366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226695.1;locus_tag=LI478_RS13575;product=aspartate aminotransferase family protein;protein_id=WP_004176366.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2769215 2769361 . + . ID=gene-LI478_RS13580;Name=LI478_RS13580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13580 NZ_CP085478.1 Protein Homology CDS 2769215 2769361 . + 0 ID=cds-WP_004224524.1;Parent=gene-LI478_RS13580;Dbxref=Genbank:WP_004224524.1;Name=WP_004224524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226694.1;locus_tag=LI478_RS13580;product=hypothetical protein;protein_id=WP_004224524.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2769574 2770848 . + . ID=gene-LI478_RS13585;Name=LI478_RS13585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13585 NZ_CP085478.1 Protein Homology CDS 2769574 2770848 . + 0 ID=cds-WP_004151574.1;Parent=gene-LI478_RS13585;Dbxref=Genbank:WP_004151574.1;Name=WP_004151574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122303.1;locus_tag=LI478_RS13585;product=Glu/Leu/Phe/Val dehydrogenase;protein_id=WP_004151574.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2771004 2772002 . - . ID=gene-LI478_RS13590;Name=LI478_RS13590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13590 NZ_CP085478.1 Protein Homology CDS 2771004 2772002 . - 0 ID=cds-WP_004148231.1;Parent=gene-LI478_RS13590;Dbxref=Genbank:WP_004148231.1;Name=WP_004148231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226691.1;locus_tag=LI478_RS13590;product=aldo/keto reductase;protein_id=WP_004148231.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2772103 2773050 . + . ID=gene-LI478_RS13595;Name=LI478_RS13595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13595 NZ_CP085478.1 Protein Homology CDS 2772103 2773050 . + 0 ID=cds-WP_002902971.1;Parent=gene-LI478_RS13595;Dbxref=Genbank:WP_002902971.1;Name=WP_002902971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226690.1;locus_tag=LI478_RS13595;product=LysR family transcriptional regulator;protein_id=WP_002902971.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2773158 2773589 . + . ID=gene-LI478_RS13600;Name=LI478_RS13600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13600 NZ_CP085478.1 Protein Homology CDS 2773158 2773589 . + 0 ID=cds-WP_002902969.1;Parent=gene-LI478_RS13600;Dbxref=Genbank:WP_002902969.1;Name=WP_002902969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226689.1;locus_tag=LI478_RS13600;product=MarR family transcriptional regulator;protein_id=WP_002902969.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2773589 2775241 . + . ID=gene-LI478_RS13605;Name=LI478_RS13605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13605 NZ_CP085478.1 Protein Homology CDS 2773589 2775241 . + 0 ID=cds-WP_002902967.1;Parent=gene-LI478_RS13605;Dbxref=Genbank:WP_002902967.1;Name=WP_002902967.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226688.1;locus_tag=LI478_RS13605;product=MFS transporter;protein_id=WP_002902967.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2775270 2776355 . + . ID=gene-LI478_RS13610;Name=LI478_RS13610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13610 NZ_CP085478.1 Protein Homology CDS 2775270 2776355 . + 0 ID=cds-WP_002902965.1;Parent=gene-LI478_RS13610;Dbxref=Genbank:WP_002902965.1;Name=WP_002902965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226687.1;locus_tag=LI478_RS13610;product=HlyD family secretion protein;protein_id=WP_002902965.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2776352 2777731 . + . ID=gene-LI478_RS13615;Name=LI478_RS13615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13615 NZ_CP085478.1 Protein Homology CDS 2776352 2777731 . + 0 ID=cds-WP_020804011.1;Parent=gene-LI478_RS13615;Dbxref=Genbank:WP_020804011.1;Name=WP_020804011.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226686.1;locus_tag=LI478_RS13615;product=efflux transporter outer membrane subunit;protein_id=WP_020804011.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2777732 2778406 . + . ID=gene-LI478_RS13620;Name=LI478_RS13620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13620 NZ_CP085478.1 Protein Homology CDS 2777732 2778406 . + 0 ID=cds-WP_019704213.1;Parent=gene-LI478_RS13620;Dbxref=Genbank:WP_019704213.1;Name=WP_019704213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226685.1;locus_tag=LI478_RS13620;product=O-methyltransferase;protein_id=WP_019704213.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2778467 2782312 . - . ID=gene-LI478_RS13625;Name=hrpA;gbkey=Gene;gene=hrpA;gene_biotype=protein_coding;locus_tag=LI478_RS13625 NZ_CP085478.1 Protein Homology CDS 2778467 2782312 . - 0 ID=cds-WP_231621489.1;Parent=gene-LI478_RS13625;Dbxref=Genbank:WP_231621489.1;Name=WP_231621489.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=hrpA;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226684.1;locus_tag=LI478_RS13625;product=ATP-dependent RNA helicase HrpA;protein_id=WP_231621489.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2782574 2783179 . + . ID=gene-LI478_RS13630;Name=azoR;gbkey=Gene;gene=azoR;gene_biotype=protein_coding;locus_tag=LI478_RS13630 NZ_CP085478.1 Protein Homology CDS 2782574 2783179 . + 0 ID=cds-WP_002902889.1;Parent=gene-LI478_RS13630;Dbxref=Genbank:WP_002902889.1;Name=WP_002902889.1;gbkey=CDS;gene=azoR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226683.1;locus_tag=LI478_RS13630;product=FMN-dependent NADH-azoreductase;protein_id=WP_002902889.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2783216 2783626 . - . ID=gene-LI478_RS13635;Name=LI478_RS13635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13635 NZ_CP085478.1 Protein Homology CDS 2783216 2783626 . - 0 ID=cds-WP_024940864.1;Parent=gene-LI478_RS13635;Dbxref=Genbank:WP_024940864.1;Name=WP_024940864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012905883.1;locus_tag=LI478_RS13635;product=GFA family protein;protein_id=WP_024940864.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2783635 2784231 . - . ID=gene-LI478_RS13640;Name=paaY;gbkey=Gene;gene=paaY;gene_biotype=protein_coding;locus_tag=LI478_RS13640 NZ_CP085478.1 Protein Homology CDS 2783635 2784231 . - 0 ID=cds-WP_004183856.1;Parent=gene-LI478_RS13640;Dbxref=Genbank:WP_004183856.1;Name=WP_004183856.1;Ontology_term=GO:0010124;gbkey=CDS;gene=paaY;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226681.1;locus_tag=LI478_RS13640;product=phenylacetic acid degradation protein PaaY;protein_id=WP_004183856.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2784241 2785167 . - . ID=gene-LI478_RS13645;Name=paaX;gbkey=Gene;gene=paaX;gene_biotype=protein_coding;locus_tag=LI478_RS13645 NZ_CP085478.1 Protein Homology CDS 2784241 2785167 . - 0 ID=cds-WP_020803992.1;Parent=gene-LI478_RS13645;Dbxref=Genbank:WP_020803992.1;Name=WP_020803992.1;Ontology_term=GO:0006351;gbkey=CDS;gene=paaX;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226680.1;locus_tag=LI478_RS13645;product=phenylacetic acid degradation operon negative regulatory protein PaaX;protein_id=WP_020803992.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2785267 2786583 . - . ID=gene-LI478_RS13650;Name=paaF;gbkey=Gene;gene=paaF;gene_biotype=protein_coding;locus_tag=LI478_RS13650 NZ_CP085478.1 Protein Homology CDS 2785267 2786583 . - 0 ID=cds-WP_020803996.1;Parent=gene-LI478_RS13650;Dbxref=Genbank:WP_020803996.1;Name=WP_020803996.1;Ontology_term=GO:0010124,GO:0047475;gbkey=CDS;gene=paaF;go_function=phenylacetate-CoA ligase activity|0047475||IEA;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226679.1;locus_tag=LI478_RS13650;product=phenylacetate--CoA ligase;protein_id=WP_020803996.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2786610 2787815 . - . ID=gene-LI478_RS13655;Name=pcaF;gbkey=Gene;gene=pcaF;gene_biotype=protein_coding;locus_tag=LI478_RS13655 NZ_CP085478.1 Protein Homology CDS 2786610 2787815 . - 0 ID=cds-WP_004151578.1;Parent=gene-LI478_RS13655;Dbxref=Genbank:WP_004151578.1;Name=WP_004151578.1;Ontology_term=GO:0019619,GO:0016747;gbkey=CDS;gene=pcaF;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=3%2C4-dihydroxybenzoate catabolic process|0019619||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226678.1;locus_tag=LI478_RS13655;product=3-oxoadipyl-CoA thiolase;protein_id=WP_004151578.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2787815 2788237 . - . ID=gene-LI478_RS13660;Name=paaI;gbkey=Gene;gene=paaI;gene_biotype=protein_coding;locus_tag=LI478_RS13660 NZ_CP085478.1 Protein Homology CDS 2787815 2788237 . - 0 ID=cds-WP_002902876.1;Parent=gene-LI478_RS13660;Dbxref=Genbank:WP_002902876.1;Name=WP_002902876.1;Ontology_term=GO:0010124;gbkey=CDS;gene=paaI;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226677.1;locus_tag=LI478_RS13660;product=hydroxyphenylacetyl-CoA thioesterase PaaI;protein_id=WP_002902876.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2788227 2789651 . - . ID=gene-LI478_RS13665;Name=LI478_RS13665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13665 NZ_CP085478.1 Protein Homology CDS 2788227 2789651 . - 0 ID=cds-WP_016831960.1;Parent=gene-LI478_RS13665;Dbxref=Genbank:WP_016831960.1;Name=WP_016831960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226676.1;locus_tag=LI478_RS13665;product=3-hydroxyacyl-CoA dehydrogenase;protein_id=WP_016831960.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2789652 2790440 . - . ID=gene-LI478_RS13670;Name=paaG;gbkey=Gene;gene=paaG;gene_biotype=protein_coding;locus_tag=LI478_RS13670 NZ_CP085478.1 Protein Homology CDS 2789652 2790440 . - 0 ID=cds-WP_004140117.1;Parent=gene-LI478_RS13670;Dbxref=Genbank:WP_004140117.1;Name=WP_004140117.1;Ontology_term=GO:0010124,GO:0004300;gbkey=CDS;gene=paaG;go_function=enoyl-CoA hydratase activity|0004300||IEA;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226675.1;locus_tag=LI478_RS13670;product=2-(1%2C2-epoxy-1%2C2-dihydrophenyl)acetyl-CoA isomerase PaaG;protein_id=WP_004140117.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2790443 2791210 . - . ID=gene-LI478_RS13675;Name=LI478_RS13675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13675 NZ_CP085478.1 Protein Homology CDS 2790443 2791210 . - 0 ID=cds-WP_016947249.1;Parent=gene-LI478_RS13675;Dbxref=Genbank:WP_016947249.1;Name=WP_016947249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226674.1;locus_tag=LI478_RS13675;product=2%2C3-dehydroadipyl-CoA hydratase;protein_id=WP_016947249.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2791207 2792277 . - . ID=gene-LI478_RS13680;Name=paaK;gbkey=Gene;gene=paaK;gene_biotype=protein_coding;locus_tag=LI478_RS13680 NZ_CP085478.1 Protein Homology CDS 2791207 2792277 . - 0 ID=cds-WP_016947248.1;Parent=gene-LI478_RS13680;Dbxref=Genbank:WP_016947248.1;Name=WP_016947248.1;Ontology_term=GO:0010124;gbkey=CDS;gene=paaK;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226673.1;locus_tag=LI478_RS13680;product=phenylacetate-CoA oxygenase/reductase subunit PaaK;protein_id=WP_016947248.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2792285 2792782 . - . ID=gene-LI478_RS13685;Name=paaJ;gbkey=Gene;gene=paaJ;gene_biotype=protein_coding;locus_tag=LI478_RS13685 NZ_CP085478.1 Protein Homology CDS 2792285 2792782 . - 0 ID=cds-WP_016947247.1;Parent=gene-LI478_RS13685;Dbxref=Genbank:WP_016947247.1;Name=WP_016947247.1;Ontology_term=GO:0010124;gbkey=CDS;gene=paaJ;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226672.1;locus_tag=LI478_RS13685;product=phenylacetate-CoA oxygenase subunit PaaJ;protein_id=WP_016947247.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2792794 2793549 . - . ID=gene-LI478_RS13690;Name=paaC;gbkey=Gene;gene=paaC;gene_biotype=protein_coding;locus_tag=LI478_RS13690 NZ_CP085478.1 Protein Homology CDS 2792794 2793549 . - 0 ID=cds-WP_016947246.1;Parent=gene-LI478_RS13690;Dbxref=Genbank:WP_016947246.1;Name=WP_016947246.1;Ontology_term=GO:0010124;gbkey=CDS;gene=paaC;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226671.1;locus_tag=LI478_RS13690;product=phenylacetate-CoA oxygenase subunit PaaC;protein_id=WP_016947246.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2793557 2793844 . - . ID=gene-LI478_RS13695;Name=paaB;gbkey=Gene;gene=paaB;gene_biotype=protein_coding;locus_tag=LI478_RS13695 NZ_CP085478.1 Protein Homology CDS 2793557 2793844 . - 0 ID=cds-WP_004224492.1;Parent=gene-LI478_RS13695;Dbxref=Genbank:WP_004224492.1;Name=WP_004224492.1;Ontology_term=GO:0010124;gbkey=CDS;gene=paaB;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226670.1;locus_tag=LI478_RS13695;product=1%2C2-phenylacetyl-CoA epoxidase subunit B;protein_id=WP_004224492.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2793856 2794785 . - . ID=gene-LI478_RS13700;Name=paaA;gbkey=Gene;gene=paaA;gene_biotype=protein_coding;locus_tag=LI478_RS13700 NZ_CP085478.1 Protein Homology CDS 2793856 2794785 . - 0 ID=cds-WP_004176377.1;Parent=gene-LI478_RS13700;Dbxref=Genbank:WP_004176377.1;Name=WP_004176377.1;Ontology_term=GO:0010124,GO:0097266;gbkey=CDS;gene=paaA;go_function=phenylacetyl-CoA 1%2C2-epoxidase activity|0097266||IEA;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415906.1;locus_tag=LI478_RS13700;product=1%2C2-phenylacetyl-CoA epoxidase subunit A;protein_id=WP_004176377.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2795072 2797117 . + . ID=gene-LI478_RS13705;Name=paaZ;gbkey=Gene;gene=paaZ;gene_biotype=protein_coding;locus_tag=LI478_RS13705 NZ_CP085478.1 Protein Homology CDS 2795072 2797117 . + 0 ID=cds-WP_064153554.1;Parent=gene-LI478_RS13705;Dbxref=Genbank:WP_064153554.1;Name=WP_064153554.1;gbkey=CDS;gene=paaZ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226668.1;locus_tag=LI478_RS13705;product=phenylacetic acid degradation bifunctional protein PaaZ;protein_id=WP_064153554.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2797594 2799861 . + . ID=gene-LI478_RS13710;Name=tynA;gbkey=Gene;gene=tynA;gene_biotype=protein_coding;locus_tag=LI478_RS13710 NZ_CP085478.1 Protein Homology CDS 2797594 2799861 . + 0 ID=cds-WP_020803986.1;Parent=gene-LI478_RS13710;Dbxref=Genbank:WP_020803986.1;Name=WP_020803986.1;Ontology_term=GO:0009308,GO:0005507,GO:0008131,GO:0048038;gbkey=CDS;gene=tynA;go_function=copper ion binding|0005507||IEA,primary amine oxidase activity|0008131||IEA,quinone binding|0048038||IEA;go_process=amine metabolic process|0009308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226667.1;locus_tag=LI478_RS13710;product=primary-amine oxidase;protein_id=WP_020803986.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2799864 2800847 . - . ID=gene-LI478_RS13715;Name=LI478_RS13715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13715 NZ_CP085478.1 Protein Homology CDS 2799864 2800847 . - 0 ID=cds-WP_074185293.1;Parent=gene-LI478_RS13715;Dbxref=Genbank:WP_074185293.1;Name=WP_074185293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226666.1;locus_tag=LI478_RS13715;product=zinc-dependent alcohol dehydrogenase family protein;protein_id=WP_074185293.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2800870 2801688 . - . ID=gene-LI478_RS13720;Name=LI478_RS13720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13720 NZ_CP085478.1 Protein Homology CDS 2800870 2801688 . - 0 ID=cds-WP_032102800.1;Parent=gene-LI478_RS13720;Dbxref=Genbank:WP_032102800.1;Name=WP_032102800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004224479.1;locus_tag=LI478_RS13720;product=phytanoyl-CoA dioxygenase family protein;protein_id=WP_032102800.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2801713 2802870 . - . ID=gene-LI478_RS13725;Name=argE;gbkey=Gene;gene=argE;gene_biotype=protein_coding;locus_tag=LI478_RS13725 NZ_CP085478.1 Protein Homology CDS 2801713 2802870 . - 0 ID=cds-WP_040188160.1;Parent=gene-LI478_RS13725;Dbxref=Genbank:WP_040188160.1;Name=WP_040188160.1;Ontology_term=GO:0006592,GO:0008777;gbkey=CDS;gene=argE;go_function=acetylornithine deacetylase activity|0008777||IEA;go_process=ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004224477.1;locus_tag=LI478_RS13725;product=acetylornithine deacetylase;protein_id=WP_040188160.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2802863 2803537 . - . ID=gene-LI478_RS13730;Name=LI478_RS13730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13730 NZ_CP085478.1 Protein Homology CDS 2802863 2803537 . - 0 ID=cds-WP_064153552.1;Parent=gene-LI478_RS13730;Dbxref=Genbank:WP_064153552.1;Name=WP_064153552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008805132.1;locus_tag=LI478_RS13730;product=DUF1028 domain-containing protein;protein_id=WP_064153552.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2803534 2803968 . - . ID=gene-LI478_RS13735;Name=LI478_RS13735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13735 NZ_CP085478.1 Protein Homology CDS 2803534 2803968 . - 0 ID=cds-WP_004190423.1;Parent=gene-LI478_RS13735;Dbxref=Genbank:WP_004190423.1;Name=WP_004190423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004190423.1;locus_tag=LI478_RS13735;product=RidA family protein;protein_id=WP_004190423.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2803993 2805252 . - . ID=gene-LI478_RS13740;Name=LI478_RS13740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13740 NZ_CP085478.1 Protein Homology CDS 2803993 2805252 . - 0 ID=cds-WP_064153550.1;Parent=gene-LI478_RS13740;Dbxref=Genbank:WP_064153550.1;Name=WP_064153550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020803972.1;locus_tag=LI478_RS13740;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_064153550.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2805422 2806336 . - . ID=gene-LI478_RS13745;Name=LI478_RS13745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13745 NZ_CP085478.1 Protein Homology CDS 2805422 2806336 . - 0 ID=cds-WP_004190428.1;Parent=gene-LI478_RS13745;Dbxref=Genbank:WP_004190428.1;Name=WP_004190428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004190428.1;locus_tag=LI478_RS13745;product=LysR substrate-binding domain-containing protein;protein_id=WP_004190428.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2806825 2808345 . + . ID=gene-LI478_RS13750;Name=LI478_RS13750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13750 NZ_CP085478.1 Protein Homology CDS 2806825 2808345 . + 0 ID=cds-WP_064153549.1;Parent=gene-LI478_RS13750;Dbxref=Genbank:WP_064153549.1;Name=WP_064153549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229143.1;locus_tag=LI478_RS13750;product=amino acid ABC transporter permease/ATP-binding protein;protein_id=WP_064153549.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2808372 2809244 . + . ID=gene-LI478_RS13755;Name=LI478_RS13755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13755 NZ_CP085478.1 Protein Homology CDS 2808372 2809244 . + 0 ID=cds-WP_064153547.1;Parent=gene-LI478_RS13755;Dbxref=Genbank:WP_064153547.1;Name=WP_064153547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017898740.1;locus_tag=LI478_RS13755;product=phytanoyl-CoA dioxygenase family protein;protein_id=WP_064153547.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2809268 2810098 . + . ID=gene-LI478_RS13760;Name=LI478_RS13760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13760 NZ_CP085478.1 Protein Homology CDS 2809268 2810098 . + 0 ID=cds-WP_012541942.1;Parent=gene-LI478_RS13760;Dbxref=Genbank:WP_012541942.1;Name=WP_012541942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015958334.1;locus_tag=LI478_RS13760;product=ABC transporter substrate-binding protein;protein_id=WP_012541942.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2810104 2810835 . + . ID=gene-LI478_RS13765;Name=LI478_RS13765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13765 NZ_CP085478.1 Protein Homology CDS 2810104 2810835 . + 0 ID=cds-WP_004224462.1;Parent=gene-LI478_RS13765;Dbxref=Genbank:WP_004224462.1;Name=WP_004224462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017879878.1;locus_tag=LI478_RS13765;product=class II aldolase and adducin N-terminal domain-containing protein;protein_id=WP_004224462.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2810863 2811753 . - . ID=gene-LI478_RS13770;Name=LI478_RS13770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13770 NZ_CP085478.1 Protein Homology CDS 2810863 2811753 . - 0 ID=cds-WP_048332591.1;Parent=gene-LI478_RS13770;Dbxref=Genbank:WP_048332591.1;Name=WP_048332591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226665.1;locus_tag=LI478_RS13770;product=oxidoreductase;protein_id=WP_048332591.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2811878 2813377 . - . ID=gene-LI478_RS13775;Name=LI478_RS13775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13775 NZ_CP085478.1 Protein Homology CDS 2811878 2813377 . - 0 ID=cds-WP_004140136.1;Parent=gene-LI478_RS13775;Dbxref=Genbank:WP_004140136.1;Name=WP_004140136.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226664.1;locus_tag=LI478_RS13775;product=aldehyde dehydrogenase family protein;protein_id=WP_004140136.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2813613 2814515 . + . ID=gene-LI478_RS13780;Name=feaR;gbkey=Gene;gene=feaR;gene_biotype=protein_coding;locus_tag=LI478_RS13780 NZ_CP085478.1 Protein Homology CDS 2813613 2814515 . + 0 ID=cds-WP_004151588.1;Parent=gene-LI478_RS13780;Dbxref=Genbank:WP_004151588.1;Name=WP_004151588.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=feaR;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226663.1;locus_tag=LI478_RS13780;product=transcriptional regulator FeaR;protein_id=WP_004151588.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2814516 2814839 . - . ID=gene-LI478_RS13785;Name=LI478_RS13785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13785 NZ_CP085478.1 Protein Homology CDS 2814516 2814839 . - 0 ID=cds-WP_002902522.1;Parent=gene-LI478_RS13785;Dbxref=Genbank:WP_002902522.1;Name=WP_002902522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226662.1;locus_tag=LI478_RS13785;product=YdbL family protein;protein_id=WP_002902522.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2814847 2815032 . - . ID=gene-LI478_RS13790;Name=LI478_RS13790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13790 NZ_CP085478.1 Protein Homology CDS 2814847 2815032 . - 0 ID=cds-WP_002902519.1;Parent=gene-LI478_RS13790;Dbxref=Genbank:WP_002902519.1;Name=WP_002902519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226661.1;locus_tag=LI478_RS13790;product=YnbE family lipoprotein;protein_id=WP_002902519.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2815029 2817668 . - . ID=gene-LI478_RS13795;Name=LI478_RS13795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13795 NZ_CP085478.1 Protein Homology CDS 2815029 2817668 . - 0 ID=cds-WP_032414842.1;Parent=gene-LI478_RS13795;Dbxref=Genbank:WP_032414842.1;Name=WP_032414842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019705264.1;locus_tag=LI478_RS13795;product=YdbH family protein;protein_id=WP_032414842.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2817875 2818375 . + . ID=gene-LI478_RS13800;Name=LI478_RS13800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13800 NZ_CP085478.1 Protein Homology CDS 2817875 2818375 . + 0 ID=cds-WP_002902516.1;Parent=gene-LI478_RS13800;Dbxref=Genbank:WP_002902516.1;Name=WP_002902516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008805142.1;locus_tag=LI478_RS13800;product=DedA family protein;protein_id=WP_002902516.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2818523 2819512 . + . ID=gene-LI478_RS13805;Name=LI478_RS13805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13805 NZ_CP085478.1 Protein Homology CDS 2818523 2819512 . + 0 ID=cds-WP_002902515.1;Parent=gene-LI478_RS13805;Dbxref=Genbank:WP_002902515.1;Name=WP_002902515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226656.1;locus_tag=LI478_RS13805;product=2-hydroxyacid dehydrogenase;protein_id=WP_002902515.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2819635 2820075 . + . ID=gene-LI478_RS13810;Name=hslJ;gbkey=Gene;gene=hslJ;gene_biotype=protein_coding;locus_tag=LI478_RS13810 NZ_CP085478.1 Protein Homology CDS 2819635 2820075 . + 0 ID=cds-WP_102007287.1;Parent=gene-LI478_RS13810;Dbxref=Genbank:WP_102007287.1;Name=WP_102007287.1;gbkey=CDS;gene=hslJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008805144.1;locus_tag=LI478_RS13810;product=heat shock protein HslJ;protein_id=WP_102007287.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2820121 2820384 . - . ID=gene-LI478_RS13815;Name=LI478_RS13815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13815 NZ_CP085478.1 Protein Homology CDS 2820121 2820384 . - 0 ID=cds-WP_004140155.1;Parent=gene-LI478_RS13815;Dbxref=Genbank:WP_004140155.1;Name=WP_004140155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588453.1;locus_tag=LI478_RS13815;product=DUF333 domain-containing protein;protein_id=WP_004140155.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2820747 2824274 . + . ID=gene-LI478_RS13820;Name=nifJ;gbkey=Gene;gene=nifJ;gene_biotype=protein_coding;locus_tag=LI478_RS13820 NZ_CP085478.1 Protein Homology CDS 2820747 2824274 . + 0 ID=cds-WP_064153543.1;Parent=gene-LI478_RS13820;Dbxref=Genbank:WP_064153543.1;Name=WP_064153543.1;Ontology_term=GO:0022900,GO:0005506,GO:0016903,GO:0030976;gbkey=CDS;gene=nifJ;go_function=iron ion binding|0005506||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors|0016903||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226653.1;locus_tag=LI478_RS13820;product=pyruvate:ferredoxin (flavodoxin) oxidoreductase;protein_id=WP_064153543.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2824631 2825755 . + . ID=gene-LI478_RS13825;Name=ompK37;gbkey=Gene;gene=ompK37;gene_biotype=protein_coding;locus_tag=LI478_RS13825 NZ_CP085478.1 Protein Homology CDS 2824631 2825755 . + 0 ID=cds-WP_004176397.1;Parent=gene-LI478_RS13825;Dbxref=Genbank:WP_004176397.1;Name=WP_004176397.1;gbkey=CDS;gene=ompK37;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226652.1;locus_tag=LI478_RS13825;product=porin OmpK37;protein_id=WP_004176397.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2825899 2826111 . + . ID=gene-LI478_RS13830;Name=LI478_RS13830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13830 NZ_CP085478.1 Protein Homology CDS 2825899 2826111 . + 0 ID=cds-WP_002902432.1;Parent=gene-LI478_RS13830;Dbxref=Genbank:WP_002902432.1;Name=WP_002902432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226651.1;locus_tag=LI478_RS13830;product=KTSC domain-containing protein;protein_id=WP_002902432.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2826193 2826627 . + . ID=gene-LI478_RS13835;Name=uspF;gbkey=Gene;gene=uspF;gene_biotype=protein_coding;locus_tag=LI478_RS13835 NZ_CP085478.1 Protein Homology CDS 2826193 2826627 . + 0 ID=cds-WP_004140161.1;Parent=gene-LI478_RS13835;Dbxref=Genbank:WP_004140161.1;Name=WP_004140161.1;gbkey=CDS;gene=uspF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226650.1;locus_tag=LI478_RS13835;product=universal stress protein UspF;protein_id=WP_004140161.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2826861 2827796 . + . ID=gene-LI478_RS13840;Name=ttcA;gbkey=Gene;gene=ttcA;gene_biotype=protein_coding;locus_tag=LI478_RS13840 NZ_CP085478.1 Protein Homology CDS 2826861 2827796 . + 0 ID=cds-WP_050885497.1;Parent=gene-LI478_RS13840;Dbxref=Genbank:WP_050885497.1;Name=WP_050885497.1;Ontology_term=GO:0008033;gbkey=CDS;gene=ttcA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226649.1;locus_tag=LI478_RS13840;product=tRNA 2-thiocytidine(32) synthetase TtcA;protein_id=WP_050885497.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2827842 2829215 . - . ID=gene-LI478_RS13845;Name=dbpA;gbkey=Gene;gene=dbpA;gene_biotype=protein_coding;locus_tag=LI478_RS13845 NZ_CP085478.1 Protein Homology CDS 2827842 2829215 . - 0 ID=cds-WP_004151591.1;Parent=gene-LI478_RS13845;Dbxref=Genbank:WP_004151591.1;Name=WP_004151591.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=dbpA;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226648.1;locus_tag=LI478_RS13845;product=ATP-dependent RNA helicase DbpA;protein_id=WP_004151591.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2829741 2830724 . - . ID=gene-LI478_RS13850;Name=zntB;gbkey=Gene;gene=zntB;gene_biotype=protein_coding;locus_tag=LI478_RS13850 NZ_CP085478.1 Protein Homology CDS 2829741 2830724 . - 0 ID=cds-WP_048299420.1;Parent=gene-LI478_RS13850;Dbxref=Genbank:WP_048299420.1;Name=WP_048299420.1;Ontology_term=GO:0071577,GO:0005385,GO:0005886;gbkey=CDS;gene=zntB;go_component=plasma membrane|0005886||IEA;go_function=zinc ion transmembrane transporter activity|0005385||IEA;go_process=zinc ion transmembrane transport|0071577||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226647.1;locus_tag=LI478_RS13850;product=zinc transporter ZntB;protein_id=WP_048299420.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2831003 2831746 . + . ID=gene-LI478_RS13855;Name=LI478_RS13855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13855 NZ_CP085478.1 Protein Homology CDS 2831003 2831746 . + 0 ID=cds-WP_004213984.1;Parent=gene-LI478_RS13855;Dbxref=Genbank:WP_004213984.1;Name=WP_004213984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226646.1;locus_tag=LI478_RS13855;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_004213984.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2831709 2832827 . + . ID=gene-LI478_RS13860;Name=LI478_RS13860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13860 NZ_CP085478.1 Protein Homology CDS 2831709 2832827 . + 0 ID=cds-WP_020324627.1;Parent=gene-LI478_RS13860;Dbxref=Genbank:WP_020324627.1;Name=WP_020324627.1;Ontology_term=GO:0000166;gbkey=CDS;go_function=nucleotide binding|0000166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226645.1;locus_tag=LI478_RS13860;product=oxidoreductase;protein_id=WP_020324627.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2833064 2833258 . + . ID=gene-LI478_RS13865;Name=LI478_RS13865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13865 NZ_CP085478.1 Protein Homology CDS 2833064 2833258 . + 0 ID=cds-WP_004176404.1;Parent=gene-LI478_RS13865;Dbxref=Genbank:WP_004176404.1;Name=WP_004176404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226644.1;locus_tag=LI478_RS13865;product=hypothetical protein;protein_id=WP_004176404.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2833371 2834117 . - . ID=gene-LI478_RS13870;Name=LI478_RS13870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13870 NZ_CP085478.1 Protein Homology CDS 2833371 2834117 . - 0 ID=cds-WP_002902411.1;Parent=gene-LI478_RS13870;Dbxref=Genbank:WP_002902411.1;Name=WP_002902411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226643.1;locus_tag=LI478_RS13870;product=hypothetical protein;protein_id=WP_002902411.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2834408 2835076 . - . ID=gene-LI478_RS13875;Name=LI478_RS13875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13875 NZ_CP085478.1 Protein Homology CDS 2834408 2835076 . - 0 ID=cds-WP_064153542.1;Parent=gene-LI478_RS13875;Dbxref=Genbank:WP_064153542.1;Name=WP_064153542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226638.1;locus_tag=LI478_RS13875;product=ABC transporter permease;protein_id=WP_064153542.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2835069 2836082 . - . ID=gene-LI478_RS13880;Name=LI478_RS13880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13880 NZ_CP085478.1 Protein Homology CDS 2835069 2836082 . - 0 ID=cds-WP_048332769.1;Parent=gene-LI478_RS13880;Dbxref=Genbank:WP_048332769.1;Name=WP_048332769.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226637.1;locus_tag=LI478_RS13880;product=ATP-binding cassette domain-containing protein;protein_id=WP_048332769.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2836091 2836897 . - . ID=gene-LI478_RS13885;Name=LI478_RS13885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13885 NZ_CP085478.1 Protein Homology CDS 2836091 2836897 . - 0 ID=cds-WP_048299416.1;Parent=gene-LI478_RS13885;Dbxref=Genbank:WP_048299416.1;Name=WP_048299416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226636.1;locus_tag=LI478_RS13885;product=MetQ/NlpA family ABC transporter substrate-binding protein;protein_id=WP_048299416.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2837118 2838293 . + . ID=gene-LI478_RS13890;Name=LI478_RS13890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13890 NZ_CP085478.1 Protein Homology CDS 2837118 2838293 . + 0 ID=cds-WP_064153540.1;Parent=gene-LI478_RS13890;Dbxref=Genbank:WP_064153540.1;Name=WP_064153540.1;Ontology_term=GO:0009058,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226635.1;locus_tag=LI478_RS13890;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_064153540.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2838338 2839372 . - . ID=gene-LI478_RS13895;Name=LI478_RS13895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13895 NZ_CP085478.1 Protein Homology CDS 2838338 2839372 . - 0 ID=cds-WP_004176407.1;Parent=gene-LI478_RS13895;Dbxref=Genbank:WP_004176407.1;Name=WP_004176407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226634.1;locus_tag=LI478_RS13895;product=NADP-dependent oxidoreductase;protein_id=WP_004176407.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2839461 2840009 . + . ID=gene-LI478_RS13900;Name=LI478_RS13900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13900 NZ_CP085478.1 Protein Homology CDS 2839461 2840009 . + 0 ID=cds-WP_004179582.1;Parent=gene-LI478_RS13900;Dbxref=Genbank:WP_004179582.1;Name=WP_004179582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226633.1;locus_tag=LI478_RS13900;product=TetR/AcrR family transcriptional regulator;protein_id=WP_004179582.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2840066 2840977 . - . ID=gene-LI478_RS13905;Name=LI478_RS13905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13905 NZ_CP085478.1 Protein Homology CDS 2840066 2840977 . - 0 ID=cds-WP_015958266.1;Parent=gene-LI478_RS13905;Dbxref=Genbank:WP_015958266.1;Name=WP_015958266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226632.1;locus_tag=LI478_RS13905;product=NmrA/HSCARG family protein;protein_id=WP_015958266.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2840970 2841839 . - . ID=gene-LI478_RS13910;Name=LI478_RS13910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13910 NZ_CP085478.1 Protein Homology CDS 2840970 2841839 . - 0 ID=cds-WP_020324664.1;Parent=gene-LI478_RS13910;Dbxref=Genbank:WP_020324664.1;Name=WP_020324664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226631.1;locus_tag=LI478_RS13910;product=MBL fold metallo-hydrolase;protein_id=WP_020324664.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2841927 2842850 . + . ID=gene-LI478_RS13915;Name=LI478_RS13915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13915 NZ_CP085478.1 Protein Homology CDS 2841927 2842850 . + 0 ID=cds-WP_015958264.1;Parent=gene-LI478_RS13915;Dbxref=Genbank:WP_015958264.1;Name=WP_015958264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020324633.1;locus_tag=LI478_RS13915;product=LysR family transcriptional regulator;protein_id=WP_015958264.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2842870 2843775 . - . ID=gene-LI478_RS13920;Name=LI478_RS13920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13920 NZ_CP085478.1 Protein Homology CDS 2842870 2843775 . - 0 ID=cds-WP_048332765.1;Parent=gene-LI478_RS13920;Dbxref=Genbank:WP_048332765.1;Name=WP_048332765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226628.1;locus_tag=LI478_RS13920;product=LysR family transcriptional regulator;protein_id=WP_048332765.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2843915 2844844 . + . ID=gene-LI478_RS13925;Name=LI478_RS13925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13925 NZ_CP085478.1 Protein Homology CDS 2843915 2844844 . + 0 ID=cds-WP_004212332.1;Parent=gene-LI478_RS13925;Dbxref=Genbank:WP_004212332.1;Name=WP_004212332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226627.1;locus_tag=LI478_RS13925;product=aromatic alcohol reductase;protein_id=WP_004212332.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2844870 2845076 . + . ID=gene-LI478_RS13930;Name=LI478_RS13930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13930 NZ_CP085478.1 Protein Homology CDS 2844870 2845076 . + 0 ID=cds-WP_004179576.1;Parent=gene-LI478_RS13930;Dbxref=Genbank:WP_004179576.1;Name=WP_004179576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226626.1;locus_tag=LI478_RS13930;product=DUF1471 domain-containing protein;protein_id=WP_004179576.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2845127 2846005 . - . ID=gene-LI478_RS13935;Name=LI478_RS13935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13935 NZ_CP085478.1 Protein Homology CDS 2845127 2846005 . - 0 ID=cds-WP_004151595.1;Parent=gene-LI478_RS13935;Dbxref=Genbank:WP_004151595.1;Name=WP_004151595.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226625.1;locus_tag=LI478_RS13935;product=AraC family transcriptional regulator;protein_id=WP_004151595.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2846164 2846919 . + . ID=gene-LI478_RS13940;Name=LI478_RS13940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13940 NZ_CP085478.1 Protein Homology CDS 2846164 2846919 . + 0 ID=cds-WP_009486345.1;Parent=gene-LI478_RS13940;Dbxref=Genbank:WP_009486345.1;Name=WP_009486345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226624.1;locus_tag=LI478_RS13940;product=SDR family oxidoreductase;protein_id=WP_009486345.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2846924 2847517 . - . ID=gene-LI478_RS13945;Name=LI478_RS13945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13945 NZ_CP085478.1 Protein Homology CDS 2846924 2847517 . - 0 ID=cds-WP_015958263.1;Parent=gene-LI478_RS13945;Dbxref=Genbank:WP_015958263.1;Name=WP_015958263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226623.1;locus_tag=LI478_RS13945;product=TetR/AcrR family transcriptional regulator;protein_id=WP_015958263.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2847591 2848304 . + . ID=gene-LI478_RS13950;Name=bdcA;gbkey=Gene;gene=bdcA;gene_biotype=protein_coding;locus_tag=LI478_RS13950 NZ_CP085478.1 Protein Homology CDS 2847591 2848304 . + 0 ID=cds-WP_009486343.1;Parent=gene-LI478_RS13950;Dbxref=Genbank:WP_009486343.1;Name=WP_009486343.1;Ontology_term=GO:0016491;gbkey=CDS;gene=bdcA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226622.1;locus_tag=LI478_RS13950;product=SDR family oxidoreductase;protein_id=WP_009486343.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2848371 2848865 . - . ID=gene-LI478_RS13955;Name=LI478_RS13955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13955 NZ_CP085478.1 Protein Homology CDS 2848371 2848865 . - 0 ID=cds-WP_004176416.1;Parent=gene-LI478_RS13955;Dbxref=Genbank:WP_004176416.1;Name=WP_004176416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015570428.1;locus_tag=LI478_RS13955;product=hypothetical protein;protein_id=WP_004176416.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2848993 2849535 . - . ID=gene-LI478_RS13960;Name=tssJ;gbkey=Gene;gene=tssJ;gene_biotype=protein_coding;locus_tag=LI478_RS13960 NZ_CP085478.1 Protein Homology CDS 2848993 2849535 . - 0 ID=cds-WP_004176417.1;Parent=gene-LI478_RS13960;Dbxref=Genbank:WP_004176417.1;Name=WP_004176417.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssJ;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226619.1;locus_tag=LI478_RS13960;product=type VI secretion system lipoprotein TssJ;protein_id=WP_004176417.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2849513 2850598 . - . ID=gene-LI478_RS13965;Name=tssG;gbkey=Gene;gene=tssG;gene_biotype=protein_coding;locus_tag=LI478_RS13965 NZ_CP085478.1 Protein Homology CDS 2849513 2850598 . - 0 ID=cds-WP_004176418.1;Parent=gene-LI478_RS13965;Dbxref=Genbank:WP_004176418.1;Name=WP_004176418.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssG;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226618.1;locus_tag=LI478_RS13965;product=type VI secretion system baseplate subunit TssG;protein_id=WP_004176418.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2850562 2852316 . - . ID=gene-LI478_RS13970;Name=tssF;gbkey=Gene;gene=tssF;gene_biotype=protein_coding;locus_tag=LI478_RS13970 NZ_CP085478.1 Protein Homology CDS 2850562 2852316 . - 0 ID=cds-WP_032431745.1;Parent=gene-LI478_RS13970;Dbxref=Genbank:WP_032431745.1;Name=WP_032431745.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssF;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226617.1;locus_tag=LI478_RS13970;product=type VI secretion system baseplate subunit TssF;protein_id=WP_032431745.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2852393 2852863 . - . ID=gene-LI478_RS13975;Name=LI478_RS13975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13975 NZ_CP085478.1 Protein Homology CDS 2852393 2852863 . - 0 ID=cds-WP_004190508.1;Parent=gene-LI478_RS13975;Dbxref=Genbank:WP_004190508.1;Name=WP_004190508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004190508.1;locus_tag=LI478_RS13975;product=hypothetical protein;protein_id=WP_004190508.1;transl_table=11 NZ_CP085478.1 RefSeq pseudogene 2852860 2853934 . - . ID=gene-LI478_RS13980;Name=LI478_RS13980;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS13980;pseudo=true NZ_CP085478.1 Protein Homology CDS 2852860 2853934 . - 0 ID=cds-LI478_RS13980;Parent=gene-LI478_RS13980;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002227998.1;locus_tag=LI478_RS13980;product=polymorphic toxin type 44 domain-containing protein;pseudo=true;transl_table=11 NZ_CP085478.1 RefSeq gene 2853946 2855544 . - . ID=gene-LI478_RS13985;Name=tssA;gbkey=Gene;gene=tssA;gene_biotype=protein_coding;locus_tag=LI478_RS13985 NZ_CP085478.1 Protein Homology CDS 2853946 2855544 . - 0 ID=cds-WP_009486336.1;Parent=gene-LI478_RS13985;Dbxref=Genbank:WP_009486336.1;Name=WP_009486336.1;gbkey=CDS;gene=tssA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020324647.1;locus_tag=LI478_RS13985;product=type VI secretion system protein TssA;protein_id=WP_009486336.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2855541 2859047 . - . ID=gene-LI478_RS13990;Name=LI478_RS13990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13990 NZ_CP085478.1 Protein Homology CDS 2855541 2859047 . - 0 ID=cds-WP_155061258.1;Parent=gene-LI478_RS13990;Dbxref=Genbank:WP_155061258.1;Name=WP_155061258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014907716.1;locus_tag=LI478_RS13990;product=type VI secretion protein VasK;protein_id=WP_155061258.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2858996 2860204 . - . ID=gene-LI478_RS13995;Name=LI478_RS13995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS13995 NZ_CP085478.1 Protein Homology CDS 2858996 2860204 . - 0 ID=cds-WP_020316460.1;Parent=gene-LI478_RS13995;Dbxref=Genbank:WP_020316460.1;Name=WP_020316460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020316460.1;locus_tag=LI478_RS13995;product=hypothetical protein;protein_id=WP_020316460.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2860953 2861288 . - . ID=gene-LI478_RS14000;Name=LI478_RS14000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14000 NZ_CP085478.1 Protein Homology CDS 2860953 2861288 . - 0 ID=cds-WP_149796418.1;Parent=gene-LI478_RS14000;Dbxref=Genbank:WP_149796418.1;Name=WP_149796418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015874730.1;locus_tag=LI478_RS14000;product=maltose transporter permease;protein_id=WP_149796418.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2861653 2862751 . - . ID=gene-LI478_RS14005;Name=LI478_RS14005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14005 NZ_CP085478.1 Protein Homology CDS 2862498 2862751 . - 0 ID=cds-WP_087830521.1;Parent=gene-LI478_RS14005;Dbxref=Genbank:WP_087830521.1;Name=WP_087830521.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611505.1;locus_tag=LI478_RS14005;product=IS3 family transposase;protein_id=WP_087830521.1;transl_table=11 NZ_CP085478.1 Protein Homology CDS 2861653 2862499 . - 1 ID=cds-WP_087830521.1;Parent=gene-LI478_RS14005;Dbxref=Genbank:WP_087830521.1;Name=WP_087830521.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611505.1;locus_tag=LI478_RS14005;product=IS3 family transposase;protein_id=WP_087830521.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2862944 2863465 . - . ID=gene-LI478_RS14010;Name=LI478_RS14010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14010 NZ_CP085478.1 Protein Homology CDS 2862944 2863465 . - 0 ID=cds-WP_023282455.1;Parent=gene-LI478_RS14010;Dbxref=Genbank:WP_023282455.1;Name=WP_023282455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004179560.1;locus_tag=LI478_RS14010;product=hypothetical protein;protein_id=WP_023282455.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2863650 2864006 . - . ID=gene-LI478_RS14015;Name=LI478_RS14015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14015 NZ_CP085478.1 Protein Homology CDS 2863650 2864006 . - 0 ID=cds-WP_071786725.1;Parent=gene-LI478_RS14015;Dbxref=Genbank:WP_071786725.1;Name=WP_071786725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016582324.1;locus_tag=LI478_RS14015;product=hypothetical protein;protein_id=WP_071786725.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2864021 2864410 . - . ID=gene-LI478_RS14020;Name=LI478_RS14020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14020 NZ_CP085478.1 GeneMarkS-2+ CDS 2864021 2864410 . - 0 ID=cds-WP_021469296.1;Parent=gene-LI478_RS14020;Dbxref=Genbank:WP_021469296.1;Name=WP_021469296.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LI478_RS14020;product=hypothetical protein;protein_id=WP_021469296.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2864397 2864657 . - . ID=gene-LI478_RS14025;Name=LI478_RS14025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14025 NZ_CP085478.1 Protein Homology CDS 2864397 2864657 . - 0 ID=cds-WP_064153733.1;Parent=gene-LI478_RS14025;Dbxref=Genbank:WP_064153733.1;Name=WP_064153733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004190528.1;locus_tag=LI478_RS14025;product=hypothetical protein;protein_id=WP_064153733.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2864654 2865364 . - . ID=gene-LI478_RS14030;Name=LI478_RS14030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14030 NZ_CP085478.1 GeneMarkS-2+ CDS 2864654 2865364 . - 0 ID=cds-WP_223272899.1;Parent=gene-LI478_RS14030;Dbxref=Genbank:WP_223272899.1;Name=WP_223272899.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LI478_RS14030;product=hypothetical protein;protein_id=WP_223272899.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2865391 2866413 . - . ID=gene-LI478_RS14035;Name=LI478_RS14035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14035 NZ_CP085478.1 GeneMarkS-2+ CDS 2865391 2866413 . - 0 ID=cds-WP_021469299.1;Parent=gene-LI478_RS14035;Dbxref=Genbank:WP_021469299.1;Name=WP_021469299.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LI478_RS14035;product=M23 family metallopeptidase;protein_id=WP_021469299.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2866449 2866811 . - . ID=gene-LI478_RS14040;Name=LI478_RS14040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14040 NZ_CP085478.1 GeneMarkS-2+ CDS 2866449 2866811 . - 0 ID=cds-WP_071527865.1;Parent=gene-LI478_RS14040;Dbxref=Genbank:WP_071527865.1;Name=WP_071527865.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LI478_RS14040;product=hypothetical protein;protein_id=WP_071527865.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2866818 2868050 . - . ID=gene-LI478_RS14045;Name=LI478_RS14045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14045 NZ_CP085478.1 Protein Homology CDS 2866818 2868050 . - 0 ID=cds-WP_004179554.1;Parent=gene-LI478_RS14045;Dbxref=Genbank:WP_004179554.1;Name=WP_004179554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004179554.1;locus_tag=LI478_RS14045;product=hypothetical protein;protein_id=WP_004179554.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2868043 2870553 . - . ID=gene-LI478_RS14050;Name=vgrG;gbkey=Gene;gene=vgrG;gene_biotype=protein_coding;locus_tag=LI478_RS14050 NZ_CP085478.1 Protein Homology CDS 2868043 2870553 . - 0 ID=cds-WP_074185318.1;Parent=gene-LI478_RS14050;Dbxref=Genbank:WP_074185318.1;Name=WP_074185318.1;gbkey=CDS;gene=vgrG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020323832.1;locus_tag=LI478_RS14050;product=type VI secretion system Vgr family protein;protein_id=WP_074185318.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2870555 2873209 . - . ID=gene-LI478_RS14055;Name=tssH;gbkey=Gene;gene=tssH;gene_biotype=protein_coding;locus_tag=LI478_RS14055 NZ_CP085478.1 Protein Homology CDS 2870555 2873209 . - 0 ID=cds-WP_032431738.1;Parent=gene-LI478_RS14055;Dbxref=Genbank:WP_032431738.1;Name=WP_032431738.1;Ontology_term=GO:0033103,GO:0016887,GO:0033104;gbkey=CDS;gene=tssH;go_component=type VI protein secretion system complex|0033104||IEA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226603.1;locus_tag=LI478_RS14055;product=type VI secretion system ATPase TssH;protein_id=WP_032431738.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2873474 2873965 . - . ID=gene-LI478_RS14060;Name=hcp;gbkey=Gene;gene=hcp;gene_biotype=protein_coding;locus_tag=LI478_RS14060 NZ_CP085478.1 Protein Homology CDS 2873474 2873965 . - 0 ID=cds-WP_002902160.1;Parent=gene-LI478_RS14060;Dbxref=Genbank:WP_002902160.1;Name=WP_002902160.1;gbkey=CDS;gene=hcp;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226602.1;locus_tag=LI478_RS14060;product=type VI secretion system effector Hcp;protein_id=WP_002902160.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2873970 2875676 . - . ID=gene-LI478_RS14065;Name=LI478_RS14065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14065 NZ_CP085478.1 Protein Homology CDS 2873970 2875676 . - 0 ID=cds-WP_023300938.1;Parent=gene-LI478_RS14065;Dbxref=Genbank:WP_023300938.1;Name=WP_023300938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226601.1;locus_tag=LI478_RS14065;product=OmpA family protein;protein_id=WP_023300938.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2875673 2876362 . - . ID=gene-LI478_RS14070;Name=tssL;gbkey=Gene;gene=tssL;gene_biotype=protein_coding;locus_tag=LI478_RS14070 NZ_CP085478.1 Protein Homology CDS 2875673 2876362 . - 0 ID=cds-WP_004190548.1;Parent=gene-LI478_RS14070;Dbxref=Genbank:WP_004190548.1;Name=WP_004190548.1;gbkey=CDS;gene=tssL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226600.1;locus_tag=LI478_RS14070;product=type VI secretion system protein TssL%2C short form;protein_id=WP_004190548.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2876359 2877702 . - . ID=gene-LI478_RS14075;Name=tssK;gbkey=Gene;gene=tssK;gene_biotype=protein_coding;locus_tag=LI478_RS14075 NZ_CP085478.1 Protein Homology CDS 2876359 2877702 . - 0 ID=cds-WP_015958243.1;Parent=gene-LI478_RS14075;Dbxref=Genbank:WP_015958243.1;Name=WP_015958243.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssK;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226599.1;locus_tag=LI478_RS14075;product=type VI secretion system baseplate subunit TssK;protein_id=WP_015958243.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2877712 2879256 . - . ID=gene-LI478_RS14080;Name=tssC;gbkey=Gene;gene=tssC;gene_biotype=protein_coding;locus_tag=LI478_RS14080 NZ_CP085478.1 Protein Homology CDS 2877712 2879256 . - 0 ID=cds-WP_004190552.1;Parent=gene-LI478_RS14080;Dbxref=Genbank:WP_004190552.1;Name=WP_004190552.1;Ontology_term=GO:0033103,GO:0003674,GO:0033104;gbkey=CDS;gene=tssC;go_component=type VI protein secretion system complex|0033104||IEA;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226598.1;locus_tag=LI478_RS14080;product=type VI secretion system contractile sheath large subunit;protein_id=WP_004190552.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2879299 2879790 . - . ID=gene-LI478_RS14085;Name=tssB;gbkey=Gene;gene=tssB;gene_biotype=protein_coding;locus_tag=LI478_RS14085 NZ_CP085478.1 Protein Homology CDS 2879299 2879790 . - 0 ID=cds-WP_004176434.1;Parent=gene-LI478_RS14085;Dbxref=Genbank:WP_004176434.1;Name=WP_004176434.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssB;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226597.1;locus_tag=LI478_RS14085;product=type VI secretion system contractile sheath small subunit;protein_id=WP_004176434.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2880431 2880997 . + . ID=gene-LI478_RS14090;Name=LI478_RS14090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14090 NZ_CP085478.1 Protein Homology CDS 2880431 2880997 . + 0 ID=cds-WP_004190556.1;Parent=gene-LI478_RS14090;Dbxref=Genbank:WP_004190556.1;Name=WP_004190556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004140203.1;locus_tag=LI478_RS14090;product=DJ-1/PfpI family protein;protein_id=WP_004190556.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2881196 2882728 . - . ID=gene-LI478_RS14095;Name=LI478_RS14095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14095 NZ_CP085478.1 Protein Homology CDS 2881196 2882728 . - 0 ID=cds-WP_015958241.1;Parent=gene-LI478_RS14095;Dbxref=Genbank:WP_015958241.1;Name=WP_015958241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226534.1;locus_tag=LI478_RS14095;product=HD domain-containing protein;protein_id=WP_015958241.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2882945 2883706 . - . ID=gene-LI478_RS14100;Name=LI478_RS14100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14100 NZ_CP085478.1 Protein Homology CDS 2882945 2883706 . - 0 ID=cds-WP_004176437.1;Parent=gene-LI478_RS14100;Dbxref=Genbank:WP_004176437.1;Name=WP_004176437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226533.1;locus_tag=LI478_RS14100;product=SDR family oxidoreductase;protein_id=WP_004176437.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2883815 2884729 . + . ID=gene-LI478_RS14105;Name=LI478_RS14105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14105 NZ_CP085478.1 Protein Homology CDS 2883815 2884729 . + 0 ID=cds-WP_004176438.1;Parent=gene-LI478_RS14105;Dbxref=Genbank:WP_004176438.1;Name=WP_004176438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226532.1;locus_tag=LI478_RS14105;product=LysR family transcriptional regulator;protein_id=WP_004176438.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2885030 2885218 . + . ID=gene-LI478_RS14110;Name=LI478_RS14110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14110 NZ_CP085478.1 Protein Homology CDS 2885030 2885218 . + 0 ID=cds-WP_071994685.1;Parent=gene-LI478_RS14110;Dbxref=Genbank:WP_071994685.1;Name=WP_071994685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004176439.1;locus_tag=LI478_RS14110;product=cold-shock protein;protein_id=WP_071994685.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2885289 2885597 . - . ID=gene-LI478_RS14115;Name=LI478_RS14115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14115 NZ_CP085478.1 GeneMarkS-2+ CDS 2885289 2885597 . - 0 ID=cds-WP_004152142.1;Parent=gene-LI478_RS14115;Dbxref=Genbank:WP_004152142.1;Name=WP_004152142.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LI478_RS14115;product=ATP-binding protein;protein_id=WP_004152142.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2885603 2885740 . + . ID=gene-LI478_RS14120;Name=LI478_RS14120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14120 NZ_CP085478.1 GeneMarkS-2+ CDS 2885603 2885740 . + 0 ID=cds-WP_021469311.1;Parent=gene-LI478_RS14120;Dbxref=Genbank:WP_021469311.1;Name=WP_021469311.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LI478_RS14120;product=hypothetical protein;protein_id=WP_021469311.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2885765 2886634 . - . ID=gene-LI478_RS14125;Name=LI478_RS14125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14125 NZ_CP085478.1 Protein Homology CDS 2885765 2886634 . - 0 ID=cds-WP_032414815.1;Parent=gene-LI478_RS14125;Dbxref=Genbank:WP_032414815.1;Name=WP_032414815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226529.1;locus_tag=LI478_RS14125;product=aldo/keto reductase;protein_id=WP_032414815.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2886713 2887915 . - . ID=gene-LI478_RS14130;Name=LI478_RS14130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14130 NZ_CP085478.1 Protein Homology CDS 2886713 2887915 . - 0 ID=cds-WP_048332976.1;Parent=gene-LI478_RS14130;Dbxref=Genbank:WP_048332976.1;Name=WP_048332976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226528.1;locus_tag=LI478_RS14130;product=MFS transporter;protein_id=WP_048332976.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2887988 2889124 . - . ID=gene-LI478_RS14135;Name=LI478_RS14135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14135 NZ_CP085478.1 Protein Homology CDS 2887988 2889124 . - 0 ID=cds-WP_004148151.1;Parent=gene-LI478_RS14135;Dbxref=Genbank:WP_004148151.1;Name=WP_004148151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226527.1;locus_tag=LI478_RS14135;product=alpha/beta hydrolase;protein_id=WP_004148151.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2889297 2890181 . + . ID=gene-LI478_RS14140;Name=LI478_RS14140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14140 NZ_CP085478.1 Protein Homology CDS 2889297 2890181 . + 0 ID=cds-WP_004152138.1;Parent=gene-LI478_RS14140;Dbxref=Genbank:WP_004152138.1;Name=WP_004152138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226526.1;locus_tag=LI478_RS14140;product=LysR family transcriptional regulator;protein_id=WP_004152138.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2890289 2891257 . - . ID=gene-LI478_RS14145;Name=LI478_RS14145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14145 NZ_CP085478.1 Protein Homology CDS 2890289 2891257 . - 0 ID=cds-WP_004225014.1-5;Parent=gene-LI478_RS14145;Dbxref=Genbank:WP_004225014.1;Name=WP_004225014.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=LI478_RS14145;product=IS5 family transposase;protein_id=WP_004225014.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2891275 2892027 . - . ID=gene-LI478_RS14150;Name=LI478_RS14150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14150 NZ_CP085478.1 GeneMarkS-2+ CDS 2891275 2892027 . - 0 ID=cds-WP_227394141.1;Parent=gene-LI478_RS14150;Dbxref=Genbank:WP_227394141.1;Name=WP_227394141.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LI478_RS14150;product=hypothetical protein;protein_id=WP_227394141.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2892440 2894056 . - . ID=gene-LI478_RS14155;Name=LI478_RS14155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14155 NZ_CP085478.1 Protein Homology CDS 2892440 2894056 . - 0 ID=cds-WP_004176446.1;Parent=gene-LI478_RS14155;Dbxref=Genbank:WP_004176446.1;Name=WP_004176446.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226523.1;locus_tag=LI478_RS14155;product=peptide ABC transporter substrate-binding protein;protein_id=WP_004176446.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2894053 2894169 . - . ID=gene-LI478_RS14160;Name=LI478_RS14160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14160 NZ_CP085478.1 Protein Homology CDS 2894053 2894169 . - 0 ID=cds-WP_004148146.1;Parent=gene-LI478_RS14160;Dbxref=Genbank:WP_004148146.1;Name=WP_004148146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226522.1;locus_tag=LI478_RS14160;product=hypothetical protein;protein_id=WP_004148146.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2894242 2894949 . + . ID=gene-LI478_RS14165;Name=mpaA;gbkey=Gene;gene=mpaA;gene_biotype=protein_coding;locus_tag=LI478_RS14165 NZ_CP085478.1 Protein Homology CDS 2894242 2894949 . + 0 ID=cds-WP_004152134.1;Parent=gene-LI478_RS14165;Dbxref=Genbank:WP_004152134.1;Name=WP_004152134.1;Ontology_term=GO:0006508,GO:0004181,GO:0008270;gbkey=CDS;gene=mpaA;go_function=metallocarboxypeptidase activity|0004181||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226521.1;locus_tag=LI478_RS14165;product=murein tripeptide amidase MpaA;protein_id=WP_004152134.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2894946 2895911 . - . ID=gene-LI478_RS14170;Name=ycjG;gbkey=Gene;gene=ycjG;gene_biotype=protein_coding;locus_tag=LI478_RS14170 NZ_CP085478.1 Protein Homology CDS 2894946 2895911 . - 0 ID=cds-WP_004892699.1;Parent=gene-LI478_RS14170;Dbxref=Genbank:WP_004892699.1;Name=WP_004892699.1;Ontology_term=GO:0009063,GO:0016855;gbkey=CDS;gene=ycjG;go_function=racemase and epimerase activity%2C acting on amino acids and derivatives|0016855||IEA;go_process=amino acid catabolic process|0009063||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226520.1;locus_tag=LI478_RS14170;product=L-Ala-D/L-Glu epimerase;protein_id=WP_004892699.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2896014 2896520 . + . ID=gene-LI478_RS14175;Name=tpx;gbkey=Gene;gene=tpx;gene_biotype=protein_coding;locus_tag=LI478_RS14175 NZ_CP085478.1 Protein Homology CDS 2896014 2896520 . + 0 ID=cds-WP_004152131.1;Parent=gene-LI478_RS14175;Dbxref=Genbank:WP_004152131.1;Name=WP_004152131.1;Ontology_term=GO:0008379,GO:0016684;gbkey=CDS;gene=tpx;go_function=thioredoxin peroxidase activity|0008379||IEA,oxidoreductase activity%2C acting on peroxide as acceptor|0016684||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226519.1;locus_tag=LI478_RS14175;product=thiol peroxidase;protein_id=WP_004152131.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2896591 2897643 . - . ID=gene-LI478_RS14180;Name=LI478_RS14180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14180 NZ_CP085478.1 Protein Homology CDS 2896591 2897643 . - 0 ID=cds-WP_004176450.1;Parent=gene-LI478_RS14180;Dbxref=Genbank:WP_004176450.1;Name=WP_004176450.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004152128.1;locus_tag=LI478_RS14180;product=AbrB family transcriptional regulator;protein_id=WP_004176450.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2897745 2899286 . - . ID=gene-LI478_RS14185;Name=tyrR;gbkey=Gene;gene=tyrR;gene_biotype=protein_coding;locus_tag=LI478_RS14185 NZ_CP085478.1 Protein Homology CDS 2897745 2899286 . - 0 ID=cds-WP_002901979.1;Parent=gene-LI478_RS14185;Dbxref=Genbank:WP_002901979.1;Name=WP_002901979.1;Ontology_term=GO:0006355,GO:0008134;gbkey=CDS;gene=tyrR;go_function=transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226517.1;locus_tag=LI478_RS14185;product=transcriptional regulator TyrR;protein_id=WP_002901979.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2899459 2900772 . - . ID=gene-LI478_RS14190;Name=LI478_RS14190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14190 NZ_CP085478.1 Protein Homology CDS 2899459 2900772 . - 0 ID=cds-WP_032414814.1;Parent=gene-LI478_RS14190;Dbxref=Genbank:WP_032414814.1;Name=WP_032414814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226516.1;locus_tag=LI478_RS14190;product=6-phospho-beta-glucosidase;protein_id=WP_032414814.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2900931 2901785 . + . ID=gene-LI478_RS14195;Name=LI478_RS14195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14195 NZ_CP085478.1 Protein Homology CDS 2900931 2901785 . + 0 ID=cds-WP_024623007.1;Parent=gene-LI478_RS14195;Dbxref=Genbank:WP_024623007.1;Name=WP_024623007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226515.1;locus_tag=LI478_RS14195;product=LysR substrate-binding domain-containing protein;protein_id=WP_024623007.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2901875 2902936 . - . ID=gene-LI478_RS14200;Name=LI478_RS14200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14200 NZ_CP085478.1 Protein Homology CDS 2901875 2902936 . - 0 ID=cds-WP_032414813.1;Parent=gene-LI478_RS14200;Dbxref=Genbank:WP_032414813.1;Name=WP_032414813.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226514.1;locus_tag=LI478_RS14200;product=TIGR01620 family protein;protein_id=WP_032414813.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2902933 2904330 . - . ID=gene-LI478_RS14205;Name=LI478_RS14205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14205 NZ_CP085478.1 Protein Homology CDS 2902933 2904330 . - 0 ID=cds-WP_002901917.1;Parent=gene-LI478_RS14205;Dbxref=Genbank:WP_002901917.1;Name=WP_002901917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126510.1;locus_tag=LI478_RS14205;product=YcjX family protein;protein_id=WP_002901917.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2904433 2904651 . - . ID=gene-LI478_RS14210;Name=pspD;gbkey=Gene;gene=pspD;gene_biotype=protein_coding;locus_tag=LI478_RS14210 NZ_CP085478.1 Protein Homology CDS 2904433 2904651 . - 0 ID=cds-WP_002901915.1;Parent=gene-LI478_RS14210;Dbxref=Genbank:WP_002901915.1;Name=WP_002901915.1;gbkey=CDS;gene=pspD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226512.1;locus_tag=LI478_RS14210;product=phage shock protein PspD;protein_id=WP_002901915.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2904680 2905039 . - . ID=gene-LI478_RS14215;Name=pspC;gbkey=Gene;gene=pspC;gene_biotype=protein_coding;locus_tag=LI478_RS14215 NZ_CP085478.1 Protein Homology CDS 2904680 2905039 . - 0 ID=cds-WP_064153536.1;Parent=gene-LI478_RS14215;Dbxref=Genbank:WP_064153536.1;Name=WP_064153536.1;gbkey=CDS;gene=pspC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226511.1;locus_tag=LI478_RS14215;product=envelope stress response membrane protein PspC;protein_id=WP_064153536.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2905039 2905263 . - . ID=gene-LI478_RS14220;Name=pspB;gbkey=Gene;gene=pspB;gene_biotype=protein_coding;locus_tag=LI478_RS14220 NZ_CP085478.1 Protein Homology CDS 2905039 2905263 . - 0 ID=cds-WP_002901911.1;Parent=gene-LI478_RS14220;Dbxref=Genbank:WP_002901911.1;Name=WP_002901911.1;Ontology_term=GO:0009271;gbkey=CDS;gene=pspB;go_process=phage shock|0009271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226510.1;locus_tag=LI478_RS14220;product=envelope stress response membrane protein PspB;protein_id=WP_002901911.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2905319 2905987 . - . ID=gene-LI478_RS14225;Name=pspA;gbkey=Gene;gene=pspA;gene_biotype=protein_coding;locus_tag=LI478_RS14225 NZ_CP085478.1 Protein Homology CDS 2905319 2905987 . - 0 ID=cds-WP_002901908.1;Parent=gene-LI478_RS14225;Dbxref=Genbank:WP_002901908.1;Name=WP_002901908.1;gbkey=CDS;gene=pspA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226509.1;locus_tag=LI478_RS14225;product=phage shock protein PspA;protein_id=WP_002901908.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2906140 2907129 . + . ID=gene-LI478_RS14230;Name=pspF;gbkey=Gene;gene=pspF;gene_biotype=protein_coding;locus_tag=LI478_RS14230 NZ_CP085478.1 Protein Homology CDS 2906140 2907129 . + 0 ID=cds-WP_074182312.1;Parent=gene-LI478_RS14230;Dbxref=Genbank:WP_074182312.1;Name=WP_074182312.1;gbkey=CDS;gene=pspF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226508.1;locus_tag=LI478_RS14230;product=phage shock protein operon transcriptional activator;protein_id=WP_074182312.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2907120 2908511 . - . ID=gene-LI478_RS14235;Name=LI478_RS14235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14235 NZ_CP085478.1 Protein Homology CDS 2907120 2908511 . - 0 ID=cds-WP_064143682.1;Parent=gene-LI478_RS14235;Dbxref=Genbank:WP_064143682.1;Name=WP_064143682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226507.1;locus_tag=LI478_RS14235;product=MFS transporter;protein_id=WP_064143682.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2908537 2909706 . - . ID=gene-LI478_RS14240;Name=LI478_RS14240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14240 NZ_CP085478.1 Protein Homology CDS 2908537 2909706 . - 0 ID=cds-WP_064153535.1;Parent=gene-LI478_RS14240;Dbxref=Genbank:WP_064153535.1;Name=WP_064153535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226506.1;locus_tag=LI478_RS14240;product=M20 family metallopeptidase;protein_id=WP_064153535.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2909878 2912199 . + . ID=gene-LI478_RS14245;Name=LI478_RS14245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14245 NZ_CP085478.1 Protein Homology CDS 2909878 2912199 . + 0 ID=cds-WP_227394142.1;Parent=gene-LI478_RS14245;Dbxref=Genbank:WP_227394142.1;Name=WP_227394142.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004892725.1;locus_tag=LI478_RS14245;product=helix-turn-helix domain-containing protein;protein_id=WP_227394142.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2912166 2913008 . - . ID=gene-LI478_RS14250;Name=LI478_RS14250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14250 NZ_CP085478.1 Protein Homology CDS 2912166 2913008 . - 0 ID=cds-WP_048974516.1;Parent=gene-LI478_RS14250;Dbxref=Genbank:WP_048974516.1;Name=WP_048974516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014907756.1;locus_tag=LI478_RS14250;product=helix-turn-helix transcriptional regulator;protein_id=WP_048974516.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2913116 2914024 . + . ID=gene-LI478_RS14255;Name=LI478_RS14255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14255 NZ_CP085478.1 Protein Homology CDS 2913116 2914024 . + 0 ID=cds-WP_074185290.1;Parent=gene-LI478_RS14255;Dbxref=Genbank:WP_074185290.1;Name=WP_074185290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226503.1;locus_tag=LI478_RS14255;product=SDR family oxidoreductase;protein_id=WP_074185290.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2914358 2916001 . + . ID=gene-LI478_RS14260;Name=sapA;gbkey=Gene;gene=sapA;gene_biotype=protein_coding;locus_tag=LI478_RS14260 NZ_CP085478.1 Protein Homology CDS 2914358 2916001 . + 0 ID=cds-WP_029602466.1;Parent=gene-LI478_RS14260;Dbxref=Genbank:WP_029602466.1;Name=WP_029602466.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=sapA;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460650.1;locus_tag=LI478_RS14260;product=peptide ABC transporter substrate-binding protein SapA;protein_id=WP_029602466.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2915998 2916963 . + . ID=gene-LI478_RS14265;Name=sapB;gbkey=Gene;gene=sapB;gene_biotype=protein_coding;locus_tag=LI478_RS14265 NZ_CP085478.1 Protein Homology CDS 2915998 2916963 . + 0 ID=cds-WP_008805241.1;Parent=gene-LI478_RS14265;Dbxref=Genbank:WP_008805241.1;Name=WP_008805241.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=sapB;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126482.1;locus_tag=LI478_RS14265;product=putrescine ABC transporter permease SapB;protein_id=WP_008805241.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2916950 2917840 . + . ID=gene-LI478_RS14270;Name=sapC;gbkey=Gene;gene=sapC;gene_biotype=protein_coding;locus_tag=LI478_RS14270 NZ_CP085478.1 Protein Homology CDS 2916950 2917840 . + 0 ID=cds-WP_004151901.1;Parent=gene-LI478_RS14270;Dbxref=Genbank:WP_004151901.1;Name=WP_004151901.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=sapC;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838220.1;locus_tag=LI478_RS14270;product=peptide ABC transporter permease SapC;protein_id=WP_004151901.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2917840 2918832 . + . ID=gene-LI478_RS14275;Name=sapD;gbkey=Gene;gene=sapD;gene_biotype=protein_coding;locus_tag=LI478_RS14275 NZ_CP085478.1 Protein Homology CDS 2917840 2918832 . + 0 ID=cds-WP_004140266.1;Parent=gene-LI478_RS14275;Dbxref=Genbank:WP_004140266.1;Name=WP_004140266.1;gbkey=CDS;gene=sapD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226498.1;locus_tag=LI478_RS14275;product=peptide ABC transporter ATP-binding protein SapD;protein_id=WP_004140266.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2918834 2919643 . + . ID=gene-LI478_RS14280;Name=sapF;gbkey=Gene;gene=sapF;gene_biotype=protein_coding;locus_tag=LI478_RS14280 NZ_CP085478.1 Protein Homology CDS 2918834 2919643 . + 0 ID=cds-WP_004140269.1;Parent=gene-LI478_RS14280;Dbxref=Genbank:WP_004140269.1;Name=WP_004140269.1;gbkey=CDS;gene=sapF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226497.1;locus_tag=LI478_RS14280;product=peptide ABC transporter ATP-binding protein SapF;protein_id=WP_004140269.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2919688 2921067 . - . ID=gene-LI478_RS14285;Name=LI478_RS14285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14285 NZ_CP085478.1 Protein Homology CDS 2919688 2921067 . - 0 ID=cds-WP_040088826.1;Parent=gene-LI478_RS14285;Dbxref=Genbank:WP_040088826.1;Name=WP_040088826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226496.1;locus_tag=LI478_RS14285;product=cytosine permease;protein_id=WP_040088826.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2921315 2921857 . + . ID=gene-LI478_RS14290;Name=LI478_RS14290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14290 NZ_CP085478.1 Protein Homology CDS 2921315 2921857 . + 0 ID=cds-WP_023286267.1;Parent=gene-LI478_RS14290;Dbxref=Genbank:WP_023286267.1;Name=WP_023286267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226495.1;locus_tag=LI478_RS14290;product=HutD family protein;protein_id=WP_023286267.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2922056 2922844 . + . ID=gene-LI478_RS14295;Name=fabI;gbkey=Gene;gene=fabI;gene_biotype=protein_coding;locus_tag=LI478_RS14295 NZ_CP085478.1 Protein Homology CDS 2922056 2922844 . + 0 ID=cds-WP_004140277.1;Parent=gene-LI478_RS14295;Dbxref=Genbank:WP_004140277.1;Name=WP_004140277.1;gbkey=CDS;gene=fabI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126472.1;locus_tag=LI478_RS14295;product=enoyl-ACP reductase FabI;protein_id=WP_004140277.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2923035 2924192 . + . ID=gene-LI478_RS14300;Name=LI478_RS14300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14300 NZ_CP085478.1 Protein Homology CDS 2923035 2924192 . + 0 ID=cds-WP_004151905.1;Parent=gene-LI478_RS14300;Dbxref=Genbank:WP_004151905.1;Name=WP_004151905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226492.1;locus_tag=LI478_RS14300;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_004151905.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2924274 2926208 . + . ID=gene-LI478_RS14305;Name=LI478_RS14305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14305 NZ_CP085478.1 Protein Homology CDS 2924274 2926208 . + 0 ID=cds-WP_004179478.1;Parent=gene-LI478_RS14305;Dbxref=Genbank:WP_004179478.1;Name=WP_004179478.1;Ontology_term=GO:0006401,GO:0003723,GO:0008859;gbkey=CDS;go_function=RNA binding|0003723||IEA,exoribonuclease II activity|0008859||IEA;go_process=RNA catabolic process|0006401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226491.1;locus_tag=LI478_RS14305;product=exoribonuclease II;protein_id=WP_004179478.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2926367 2926546 . + . ID=gene-LI478_RS14310;Name=LI478_RS14310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14310 NZ_CP085478.1 Protein Homology CDS 2926367 2926546 . + 0 ID=cds-WP_002901786.1;Parent=gene-LI478_RS14310;Dbxref=Genbank:WP_002901786.1;Name=WP_002901786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004892757.1;locus_tag=LI478_RS14310;product=hypothetical protein;protein_id=WP_002901786.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2926618 2927367 . + . ID=gene-LI478_RS14315;Name=LI478_RS14315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14315 NZ_CP085478.1 Protein Homology CDS 2926618 2927367 . + 0 ID=cds-WP_002901785.1;Parent=gene-LI478_RS14315;Dbxref=Genbank:WP_002901785.1;Name=WP_002901785.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226489.1;locus_tag=LI478_RS14315;product=DNA-binding transcriptional regulator YciT;protein_id=WP_002901785.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2927643 2927861 . + . ID=gene-LI478_RS14320;Name=osmB;gbkey=Gene;gene=osmB;gene_biotype=protein_coding;locus_tag=LI478_RS14320 NZ_CP085478.1 Protein Homology CDS 2927643 2927861 . + 0 ID=cds-WP_002901783.1;Parent=gene-LI478_RS14320;Dbxref=Genbank:WP_002901783.1;Name=WP_002901783.1;gbkey=CDS;gene=osmB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460664.1;locus_tag=LI478_RS14320;product=osmotically-inducible lipoprotein OsmB;protein_id=WP_002901783.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2927993 2928319 . - . ID=gene-LI478_RS14325;Name=yciH;gbkey=Gene;gene=yciH;gene_biotype=protein_coding;locus_tag=LI478_RS14325 NZ_CP085478.1 Protein Homology CDS 2927993 2928319 . - 0 ID=cds-WP_004210732.1;Parent=gene-LI478_RS14325;Dbxref=Genbank:WP_004210732.1;Name=WP_004210732.1;gbkey=CDS;gene=yciH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226486.1;locus_tag=LI478_RS14325;product=stress response translation initiation inhibitor YciH;protein_id=WP_004210732.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2928319 2929056 . - . ID=gene-LI478_RS14330;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=LI478_RS14330 NZ_CP085478.1 Protein Homology CDS 2928319 2929056 . - 0 ID=cds-WP_032438556.1;Parent=gene-LI478_RS14330;Dbxref=Genbank:WP_032438556.1;Name=WP_032438556.1;Ontology_term=GO:0006207,GO:0044205,GO:0004590;gbkey=CDS;gene=pyrF;go_function=orotidine-5'-phosphate decarboxylase activity|0004590||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,'de novo' UMP biosynthetic process|0044205||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014907762.1;locus_tag=LI478_RS14330;product=orotidine-5'-phosphate decarboxylase;protein_id=WP_032438556.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2929249 2930418 . - . ID=gene-LI478_RS14335;Name=lapB;gbkey=Gene;gene=lapB;gene_biotype=protein_coding;locus_tag=LI478_RS14335 NZ_CP085478.1 Protein Homology CDS 2929249 2930418 . - 0 ID=cds-WP_002901781.1;Parent=gene-LI478_RS14335;Dbxref=Genbank:WP_002901781.1;Name=WP_002901781.1;Ontology_term=GO:0008653,GO:0005515;gbkey=CDS;gene=lapB;go_function=protein binding|0005515||IEA;go_process=lipopolysaccharide metabolic process|0008653||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000891373.1;locus_tag=LI478_RS14335;product=lipopolysaccharide assembly protein LapB;protein_id=WP_002901781.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2930425 2930733 . - . ID=gene-LI478_RS14340;Name=LI478_RS14340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14340 NZ_CP085478.1 Protein Homology CDS 2930425 2930733 . - 0 ID=cds-WP_002901780.1;Parent=gene-LI478_RS14340;Dbxref=Genbank:WP_002901780.1;Name=WP_002901780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226482.1;locus_tag=LI478_RS14340;product=LapA family protein;protein_id=WP_002901780.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2930869 2931636 . - . ID=gene-LI478_RS14345;Name=pgpB;gbkey=Gene;gene=pgpB;gene_biotype=protein_coding;locus_tag=LI478_RS14345 NZ_CP085478.1 Protein Homology CDS 2930869 2931636 . - 0 ID=cds-WP_002901779.1;Parent=gene-LI478_RS14345;Dbxref=Genbank:WP_002901779.1;Name=WP_002901779.1;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;gene=pgpB;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002901779.1;locus_tag=LI478_RS14345;product=phosphatidylglycerophosphatase B;protein_id=WP_002901779.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2931800 2932402 . + . ID=gene-LI478_RS14350;Name=ribA;gbkey=Gene;gene=ribA;gene_biotype=protein_coding;locus_tag=LI478_RS14350 NZ_CP085478.1 Protein Homology CDS 2931800 2932402 . + 0 ID=cds-WP_002901778.1;Parent=gene-LI478_RS14350;Dbxref=Genbank:WP_002901778.1;Name=WP_002901778.1;Ontology_term=GO:0003935;gbkey=CDS;gene=ribA;go_function=GTP cyclohydrolase II activity|0003935||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226480.1;locus_tag=LI478_RS14350;product=GTP cyclohydrolase II;protein_id=WP_002901778.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2932449 2935121 . - . ID=gene-LI478_RS14355;Name=acnA;gbkey=Gene;gene=acnA;gene_biotype=protein_coding;locus_tag=LI478_RS14355 NZ_CP085478.1 Protein Homology CDS 2932449 2935121 . - 0 ID=cds-WP_004176472.1;Parent=gene-LI478_RS14355;Dbxref=Genbank:WP_004176472.1;Name=WP_004176472.1;Ontology_term=GO:0006099,GO:0003994;gbkey=CDS;gene=acnA;go_function=aconitate hydratase activity|0003994||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226479.1;locus_tag=LI478_RS14355;product=aconitate hydratase AcnA;protein_id=WP_004176472.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2935510 2935677 . - . ID=gene-LI478_RS14360;Name=LI478_RS14360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14360 NZ_CP085478.1 Protein Homology CDS 2935510 2935677 . - 0 ID=cds-WP_002901776.1;Parent=gene-LI478_RS14360;Dbxref=Genbank:WP_002901776.1;Name=WP_002901776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226477.1;locus_tag=LI478_RS14360;product=YmiA family putative membrane protein;protein_id=WP_002901776.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2935923 2936897 . - . ID=gene-LI478_RS14365;Name=cysB;gbkey=Gene;gene=cysB;gene_biotype=protein_coding;locus_tag=LI478_RS14365 NZ_CP085478.1 Protein Homology CDS 2935923 2936897 . - 0 ID=cds-WP_002901772.1;Parent=gene-LI478_RS14365;Dbxref=Genbank:WP_002901772.1;Name=WP_002901772.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=cysB;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012017585.1;locus_tag=LI478_RS14365;product=HTH-type transcriptional regulator CysB;protein_id=WP_002901772.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2937243 2939840 . - . ID=gene-LI478_RS14370;Name=topA;gbkey=Gene;gene=topA;gene_biotype=protein_coding;locus_tag=LI478_RS14370 NZ_CP085478.1 Protein Homology CDS 2937243 2939840 . - 0 ID=cds-WP_064153530.1;Parent=gene-LI478_RS14370;Dbxref=Genbank:WP_064153530.1;Name=WP_064153530.1;Ontology_term=GO:0006260,GO:0006265,GO:0003677,GO:0003917,GO:0005737;gbkey=CDS;gene=topA;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA;go_process=DNA replication|0006260||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000513601.1;locus_tag=LI478_RS14370;product=type I DNA topoisomerase;protein_id=WP_064153530.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2940247 2940498 . + . ID=gene-LI478_RS14375;Name=LI478_RS14375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14375 NZ_CP085478.1 Protein Homology CDS 2940247 2940498 . + 0 ID=cds-WP_002901761.1;Parent=gene-LI478_RS14375;Dbxref=Genbank:WP_002901761.1;Name=WP_002901761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226473.1;locus_tag=LI478_RS14375;product=YciN family protein;protein_id=WP_002901761.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2940546 2941592 . - . ID=gene-LI478_RS14380;Name=sohB;gbkey=Gene;gene=sohB;gene_biotype=protein_coding;locus_tag=LI478_RS14380 NZ_CP085478.1 Protein Homology CDS 2940546 2941592 . - 0 ID=cds-WP_002901758.1;Parent=gene-LI478_RS14380;Dbxref=Genbank:WP_002901758.1;Name=WP_002901758.1;Ontology_term=GO:0006508,GO:0008233;gbkey=CDS;gene=sohB;go_function=peptidase activity|0008233||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309871.1;locus_tag=LI478_RS14380;product=protease SohB;protein_id=WP_002901758.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2941637 2941852 . - . ID=gene-LI478_RS14385;Name=LI478_RS14385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14385 NZ_CP085478.1 GeneMarkS-2+ CDS 2941637 2941852 . - 0 ID=cds-WP_004148112.1;Parent=gene-LI478_RS14385;Dbxref=Genbank:WP_004148112.1;Name=WP_004148112.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LI478_RS14385;product=hypothetical protein;protein_id=WP_004148112.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2941847 2942608 . + . ID=gene-LI478_RS14390;Name=LI478_RS14390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14390 NZ_CP085478.1 Protein Homology CDS 2941847 2942608 . + 0 ID=cds-WP_004196459.1;Parent=gene-LI478_RS14390;Dbxref=Genbank:WP_004196459.1;Name=WP_004196459.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226470.1;locus_tag=LI478_RS14390;product=YciK family oxidoreductase;protein_id=WP_004196459.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2942605 2943195 . + . ID=gene-LI478_RS14395;Name=cobO;gbkey=Gene;gene=cobO;gene_biotype=protein_coding;locus_tag=LI478_RS14395 NZ_CP085478.1 Protein Homology CDS 2942605 2943195 . + 0 ID=cds-WP_002901749.1;Parent=gene-LI478_RS14395;Dbxref=Genbank:WP_002901749.1;Name=WP_002901749.1;Ontology_term=GO:0009236,GO:0008817;gbkey=CDS;gene=cobO;go_function=corrinoid adenosyltransferase activity|0008817||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226469.1;locus_tag=LI478_RS14395;product=cob(I)yrinic acid a%2Cc-diamide adenosyltransferase;protein_id=WP_002901749.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2943256 2944158 . - . ID=gene-LI478_RS14400;Name=rluB;gbkey=Gene;gene=rluB;gene_biotype=protein_coding;locus_tag=LI478_RS14400 NZ_CP085478.1 Protein Homology CDS 2943256 2944158 . - 0 ID=cds-WP_002901746.1;Parent=gene-LI478_RS14400;Dbxref=Genbank:WP_002901746.1;Name=WP_002901746.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluB;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226468.1;locus_tag=LI478_RS14400;product=23S rRNA pseudouridine(2605) synthase RluB;protein_id=WP_002901746.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2944439 2945335 . - . ID=gene-LI478_RS14405;Name=gcvA;gbkey=Gene;gene=gcvA;gene_biotype=protein_coding;locus_tag=LI478_RS14405 NZ_CP085478.1 Protein Homology CDS 2944439 2945335 . - 0 ID=cds-WP_004176482.1;Parent=gene-LI478_RS14405;Dbxref=Genbank:WP_004176482.1;Name=WP_004176482.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=gcvA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226467.1;locus_tag=LI478_RS14405;product=transcriptional regulator GcvA;protein_id=WP_004176482.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2945447 2946355 . + . ID=gene-LI478_RS14410;Name=LI478_RS14410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14410 NZ_CP085478.1 Protein Homology CDS 2945447 2946355 . + 0 ID=cds-WP_004210746.1;Parent=gene-LI478_RS14410;Dbxref=Genbank:WP_004210746.1;Name=WP_004210746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226466.1;locus_tag=LI478_RS14410;product=DMT family transporter;protein_id=WP_004210746.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2946377 2946997 . - . ID=gene-LI478_RS14415;Name=LI478_RS14415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14415 NZ_CP085478.1 Protein Homology CDS 2946377 2946997 . - 0 ID=cds-WP_002901738.1;Parent=gene-LI478_RS14415;Dbxref=Genbank:WP_002901738.1;Name=WP_002901738.1;Ontology_term=GO:0006400,GO:0061710;gbkey=CDS;go_function=L-threonylcarbamoyladenylate synthase|0061710||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126434.1;locus_tag=LI478_RS14415;product=L-threonylcarbamoyladenylate synthase;protein_id=WP_002901738.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2947014 2947877 . - . ID=gene-LI478_RS14420;Name=rnm;gbkey=Gene;gene=rnm;gene_biotype=protein_coding;gene_synonym=trpH,yciV;locus_tag=LI478_RS14420 NZ_CP085478.1 Protein Homology CDS 2947014 2947877 . - 0 ID=cds-WP_002901735.1;Parent=gene-LI478_RS14420;Dbxref=Genbank:WP_002901735.1;Name=WP_002901735.1;gbkey=CDS;gene=rnm;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226464.1;locus_tag=LI478_RS14420;product=RNase AM;protein_id=WP_002901735.1;transl_table=11 NZ_CP085478.1 cmsearch sequence_feature 2948037 2948132 . + . ID=id-NZ_CP085478.1:2948037..2948132;Dbxref=RFAM:RF00513;Note=Trp leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1 NZ_CP085478.1 RefSeq gene 2948166 2949728 . + . ID=gene-LI478_RS14425;Name=LI478_RS14425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14425 NZ_CP085478.1 Protein Homology CDS 2948166 2949728 . + 0 ID=cds-WP_004176488.1;Parent=gene-LI478_RS14425;Dbxref=Genbank:WP_004176488.1;Name=WP_004176488.1;Ontology_term=GO:0009058,GO:0004049;gbkey=CDS;go_function=anthranilate synthase activity|0004049||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226463.1;locus_tag=LI478_RS14425;product=anthranilate synthase component 1;protein_id=WP_004176488.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2949728 2951323 . + . ID=gene-LI478_RS14430;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=protein_coding;locus_tag=LI478_RS14430 NZ_CP085478.1 Protein Homology CDS 2949728 2951323 . + 0 ID=cds-WP_021441599.1;Parent=gene-LI478_RS14430;Dbxref=Genbank:WP_021441599.1;Name=WP_021441599.1;Ontology_term=GO:0000162,GO:0004048;gbkey=CDS;gene=trpD;go_function=anthranilate phosphoribosyltransferase activity|0004048||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008784940.1;locus_tag=LI478_RS14430;product=bifunctional anthranilate synthase glutamate amidotransferase component TrpG/anthranilate phosphoribosyltransferase TrpD;protein_id=WP_021441599.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2951327 2952685 . + . ID=gene-LI478_RS14435;Name=trpCF;gbkey=Gene;gene=trpCF;gene_biotype=protein_coding;locus_tag=LI478_RS14435 NZ_CP085478.1 Protein Homology CDS 2951327 2952685 . + 0 ID=cds-WP_014907770.1;Parent=gene-LI478_RS14435;Dbxref=Genbank:WP_014907770.1;Name=WP_014907770.1;Ontology_term=GO:0006568,GO:0004425,GO:0004640;gbkey=CDS;gene=trpCF;go_function=indole-3-glycerol-phosphate synthase activity|0004425||IEA,phosphoribosylanthranilate isomerase activity|0004640||IEA;go_process=tryptophan metabolic process|0006568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226461.1;locus_tag=LI478_RS14435;product=bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF;protein_id=WP_014907770.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2952695 2953888 . + . ID=gene-LI478_RS14440;Name=trpB;gbkey=Gene;gene=trpB;gene_biotype=protein_coding;locus_tag=LI478_RS14440 NZ_CP085478.1 Protein Homology CDS 2952695 2953888 . + 0 ID=cds-WP_002901730.1;Parent=gene-LI478_RS14440;Dbxref=Genbank:WP_002901730.1;Name=WP_002901730.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpB;go_function=tryptophan synthase activity|0004834||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226460.1;locus_tag=LI478_RS14440;product=tryptophan synthase subunit beta;protein_id=WP_002901730.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2953888 2954697 . + . ID=gene-LI478_RS14445;Name=trpA;gbkey=Gene;gene=trpA;gene_biotype=protein_coding;locus_tag=LI478_RS14445 NZ_CP085478.1 Protein Homology CDS 2953888 2954697 . + 0 ID=cds-WP_002901728.1;Parent=gene-LI478_RS14445;Dbxref=Genbank:WP_002901728.1;Name=WP_002901728.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpA;go_function=tryptophan synthase activity|0004834||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226459.1;locus_tag=LI478_RS14445;product=tryptophan synthase subunit alpha;protein_id=WP_002901728.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2954916 2956175 . - . ID=gene-LI478_RS14450;Name=LI478_RS14450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14450 NZ_CP085478.1 Protein Homology CDS 2954916 2956175 . - 0 ID=cds-WP_064153528.1;Parent=gene-LI478_RS14450;Dbxref=Genbank:WP_064153528.1;Name=WP_064153528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226458.1;locus_tag=LI478_RS14450;product=glycerate kinase;protein_id=WP_064153528.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2956178 2957266 . - . ID=gene-LI478_RS14455;Name=LI478_RS14455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14455 NZ_CP085478.1 Protein Homology CDS 2956178 2957266 . - 0 ID=cds-WP_102007285.1;Parent=gene-LI478_RS14455;Dbxref=Genbank:WP_102007285.1;Name=WP_102007285.1;Ontology_term=GO:0046395,GO:0009027;gbkey=CDS;go_function=tartrate dehydrogenase activity|0009027||IEA;go_process=carboxylic acid catabolic process|0046395||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226457.1;locus_tag=LI478_RS14455;product=tartrate dehydrogenase;protein_id=WP_102007285.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2957281 2958591 . - . ID=gene-LI478_RS14460;Name=LI478_RS14460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14460 NZ_CP085478.1 Protein Homology CDS 2957281 2958591 . - 0 ID=cds-WP_002901722.1;Parent=gene-LI478_RS14460;Dbxref=Genbank:WP_002901722.1;Name=WP_002901722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226456.1;locus_tag=LI478_RS14460;product=MFS transporter;protein_id=WP_002901722.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2958720 2959628 . + . ID=gene-LI478_RS14465;Name=LI478_RS14465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14465 NZ_CP085478.1 Protein Homology CDS 2958720 2959628 . + 0 ID=cds-WP_004183698.1;Parent=gene-LI478_RS14465;Dbxref=Genbank:WP_004183698.1;Name=WP_004183698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226455.1;locus_tag=LI478_RS14465;product=LysR family transcriptional regulator;protein_id=WP_004183698.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2959671 2960129 . - . ID=gene-LI478_RS14470;Name=LI478_RS14470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14470 NZ_CP085478.1 Protein Homology CDS 2959671 2960129 . - 0 ID=cds-WP_032104636.1;Parent=gene-LI478_RS14470;Dbxref=Genbank:WP_032104636.1;Name=WP_032104636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226454.1;locus_tag=LI478_RS14470;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_032104636.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2960204 2961151 . + . ID=gene-LI478_RS14475;Name=LI478_RS14475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14475 NZ_CP085478.1 Protein Homology CDS 2960204 2961151 . + 0 ID=cds-WP_021312928.1;Parent=gene-LI478_RS14475;Dbxref=Genbank:WP_021312928.1;Name=WP_021312928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226453.1;locus_tag=LI478_RS14475;product=zinc-binding alcohol dehydrogenase family protein;protein_id=WP_021312928.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2961260 2961460 . - . ID=gene-LI478_RS14480;Name=LI478_RS14480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14480 NZ_CP085478.1 GeneMarkS-2+ CDS 2961260 2961460 . - 0 ID=cds-WP_004151911.1;Parent=gene-LI478_RS14480;Dbxref=Genbank:WP_004151911.1;Name=WP_004151911.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LI478_RS14480;product=hypothetical protein;protein_id=WP_004151911.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2961579 2962286 . + . ID=gene-LI478_RS14485;Name=LI478_RS14485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14485 NZ_CP085478.1 Protein Homology CDS 2961579 2962286 . + 0 ID=cds-WP_032414809.1;Parent=gene-LI478_RS14485;Dbxref=Genbank:WP_032414809.1;Name=WP_032414809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226451.1;locus_tag=LI478_RS14485;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_032414809.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2962595 2964880 . + . ID=gene-LI478_RS14490;Name=LI478_RS14490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14490 NZ_CP085478.1 Protein Homology CDS 2962595 2964880 . + 0 ID=cds-WP_004210760.1;Parent=gene-LI478_RS14490;Dbxref=Genbank:WP_004210760.1;Name=WP_004210760.1;Ontology_term=GO:0015891,GO:0015344;gbkey=CDS;go_function=siderophore uptake transmembrane transporter activity|0015344||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415326.1;locus_tag=LI478_RS14490;product=catecholate siderophore receptor Fiu;protein_id=WP_004210760.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2964929 2965606 . + . ID=gene-LI478_RS14495;Name=ybiX;gbkey=Gene;gene=ybiX;gene_biotype=protein_coding;locus_tag=LI478_RS14495 NZ_CP085478.1 Protein Homology CDS 2964929 2965606 . + 0 ID=cds-WP_004140326.1;Parent=gene-LI478_RS14495;Dbxref=Genbank:WP_004140326.1;Name=WP_004140326.1;gbkey=CDS;gene=ybiX;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226449.1;locus_tag=LI478_RS14495;product=PKHD-type hydroxylase YbiX;protein_id=WP_004140326.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2965691 2966329 . - . ID=gene-LI478_RS14500;Name=ompW;gbkey=Gene;gene=ompW;gene_biotype=protein_coding;locus_tag=LI478_RS14500 NZ_CP085478.1 Protein Homology CDS 2965691 2966329 . - 0 ID=cds-WP_002901634.1;Parent=gene-LI478_RS14500;Dbxref=Genbank:WP_002901634.1;Name=WP_002901634.1;Ontology_term=GO:0019867;gbkey=CDS;gene=ompW;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309783.1;locus_tag=LI478_RS14500;product=outer membrane protein OmpW;protein_id=WP_002901634.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2966599 2967012 . + . ID=gene-LI478_RS14505;Name=LI478_RS14505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14505 NZ_CP085478.1 Protein Homology CDS 2966599 2967012 . + 0 ID=cds-WP_002901633.1;Parent=gene-LI478_RS14505;Dbxref=Genbank:WP_002901633.1;Name=WP_002901633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016947402.1;locus_tag=LI478_RS14505;product=YkgJ family cysteine cluster protein;protein_id=WP_002901633.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2967038 2967781 . + . ID=gene-LI478_RS14510;Name=LI478_RS14510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14510 NZ_CP085478.1 Protein Homology CDS 2967038 2967781 . + 0 ID=cds-WP_227394143.1;Parent=gene-LI478_RS14510;Dbxref=Genbank:WP_227394143.1;Name=WP_227394143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226446.1;locus_tag=LI478_RS14510;product=YciC family protein;protein_id=WP_227394143.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2967836 2968375 . + . ID=gene-LI478_RS14515;Name=LI478_RS14515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14515 NZ_CP085478.1 Protein Homology CDS 2967836 2968375 . + 0 ID=cds-WP_002901631.1;Parent=gene-LI478_RS14515;Dbxref=Genbank:WP_002901631.1;Name=WP_002901631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226445.1;locus_tag=LI478_RS14515;product=septation protein A;protein_id=WP_002901631.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2968647 2970830 . + . ID=gene-LI478_RS14520;Name=LI478_RS14520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14520 NZ_CP085478.1 Protein Homology CDS 2968647 2970830 . + 0 ID=cds-WP_004179434.1;Parent=gene-LI478_RS14520;Dbxref=Genbank:WP_004179434.1;Name=WP_004179434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001222186.1;locus_tag=LI478_RS14520;product=TonB-dependent siderophore receptor;protein_id=WP_004179434.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2970930 2971328 . + . ID=gene-LI478_RS14525;Name=yciA;gbkey=Gene;gene=yciA;gene_biotype=protein_coding;locus_tag=LI478_RS14525 NZ_CP085478.1 Protein Homology CDS 2970930 2971328 . + 0 ID=cds-WP_002901629.1;Parent=gene-LI478_RS14525;Dbxref=Genbank:WP_002901629.1;Name=WP_002901629.1;Ontology_term=GO:0016790;gbkey=CDS;gene=yciA;go_function=thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017898669.1;locus_tag=LI478_RS14525;product=acyl-CoA thioester hydrolase YciA;protein_id=WP_002901629.1;transl_table=11 NZ_CP085478.1 RefSeq pseudogene 2971358 2971893 . - . ID=gene-LI478_RS14530;Name=LI478_RS14530;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS14530;pseudo=true NZ_CP085478.1 Protein Homology CDS 2971358 2971893 . - 0 ID=cds-LI478_RS14530;Parent=gene-LI478_RS14530;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226442.1;locus_tag=LI478_RS14530;product=YniB family protein;pseudo=true;transl_table=11 NZ_CP085478.1 RefSeq pseudogene 2972082 2972750 . + . ID=gene-LI478_RS14535;Name=hxpB;gbkey=Gene;gene=hxpB;gene_biotype=pseudogene;locus_tag=LI478_RS14535;pseudo=true NZ_CP085478.1 Protein Homology CDS 2972082 2972750 . + 0 ID=cds-LI478_RS14535;Parent=gene-LI478_RS14535;Note=internal stop;gbkey=CDS;gene=hxpB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226441.1;locus_tag=LI478_RS14535;product=hexitol phosphatase HxpB;pseudo=true;transl_table=11 NZ_CP085478.1 RefSeq gene 2972900 2973661 . + . ID=gene-LI478_RS14540;Name=kduD;gbkey=Gene;gene=kduD;gene_biotype=protein_coding;locus_tag=LI478_RS14540 NZ_CP085478.1 Protein Homology CDS 2972900 2973661 . + 0 ID=cds-WP_004176511.1;Parent=gene-LI478_RS14540;Dbxref=Genbank:WP_004176511.1;Name=WP_004176511.1;Ontology_term=GO:0000272,GO:0008678,GO:0016491,GO:0051287;gbkey=CDS;gene=kduD;go_function=2-deoxy-D-gluconate 3-dehydrogenase activity|0008678||IEA,oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226440.1;locus_tag=LI478_RS14540;product=2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD;protein_id=WP_004176511.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2973753 2974343 . + . ID=gene-LI478_RS14545;Name=LI478_RS14545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14545 NZ_CP085478.1 Protein Homology CDS 2973753 2974343 . + 0 ID=cds-WP_002901611.1;Parent=gene-LI478_RS14545;Dbxref=Genbank:WP_002901611.1;Name=WP_002901611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226439.1;locus_tag=LI478_RS14545;product=metal-dependent hydrolase;protein_id=WP_002901611.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2974479 2975870 . + . ID=gene-LI478_RS14550;Name=LI478_RS14550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14550 NZ_CP085478.1 Protein Homology CDS 2974479 2975870 . + 0 ID=cds-WP_004151918.1;Parent=gene-LI478_RS14550;Dbxref=Genbank:WP_004151918.1;Name=WP_004151918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120792.1;locus_tag=LI478_RS14550;product=L-cystine transporter;protein_id=WP_004151918.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2975930 2976169 . - . ID=gene-LI478_RS14555;Name=cedA;gbkey=Gene;gene=cedA;gene_biotype=protein_coding;locus_tag=LI478_RS14555 NZ_CP085478.1 Protein Homology CDS 2975930 2976169 . - 0 ID=cds-WP_004151919.1;Parent=gene-LI478_RS14555;Dbxref=Genbank:WP_004151919.1;Name=WP_004151919.1;gbkey=CDS;gene=cedA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004151919.1;locus_tag=LI478_RS14555;product=cell division activator CedA;protein_id=WP_004151919.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2976375 2978639 . + . ID=gene-LI478_RS14560;Name=katE;gbkey=Gene;gene=katE;gene_biotype=protein_coding;locus_tag=LI478_RS14560 NZ_CP085478.1 Protein Homology CDS 2976375 2978639 . + 0 ID=cds-WP_064153525.1;Parent=gene-LI478_RS14560;Dbxref=Genbank:WP_064153525.1;Name=WP_064153525.1;Ontology_term=GO:0006979,GO:0004096,GO:0020037;gbkey=CDS;gene=katE;go_function=catalase activity|0004096||IEA,heme binding|0020037||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226436.1;locus_tag=LI478_RS14560;product=catalase HPII;protein_id=WP_064153525.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2978697 2979455 . - . ID=gene-LI478_RS14565;Name=chbG;gbkey=Gene;gene=chbG;gene_biotype=protein_coding;locus_tag=LI478_RS14565 NZ_CP085478.1 Protein Homology CDS 2978697 2979455 . - 0 ID=cds-WP_004176512.1;Parent=gene-LI478_RS14565;Dbxref=Genbank:WP_004176512.1;Name=WP_004176512.1;Ontology_term=GO:0000272,GO:0016811;gbkey=CDS;gene=chbG;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in linear amides|0016811||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226435.1;locus_tag=LI478_RS14565;product=chitin disaccharide deacetylase;protein_id=WP_004176512.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2979468 2980814 . - . ID=gene-LI478_RS14570;Name=LI478_RS14570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14570 NZ_CP085478.1 Protein Homology CDS 2979468 2980814 . - 0 ID=cds-WP_004209901.1;Parent=gene-LI478_RS14570;Dbxref=Genbank:WP_004209901.1;Name=WP_004209901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226434.1;locus_tag=LI478_RS14570;product=6-phospho-beta-glucosidase;protein_id=WP_004209901.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2980925 2981749 . - . ID=gene-LI478_RS14575;Name=chbR;gbkey=Gene;gene=chbR;gene_biotype=protein_coding;locus_tag=LI478_RS14575 NZ_CP085478.1 Protein Homology CDS 2980925 2981749 . - 0 ID=cds-WP_002901552.1;Parent=gene-LI478_RS14575;Dbxref=Genbank:WP_002901552.1;Name=WP_002901552.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=chbR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226433.1;locus_tag=LI478_RS14575;product=transcriptional regulator ChbR;protein_id=WP_002901552.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2981777 2982124 . - . ID=gene-LI478_RS14580;Name=chbA;gbkey=Gene;gene=chbA;gene_biotype=protein_coding;locus_tag=LI478_RS14580 NZ_CP085478.1 Protein Homology CDS 2981777 2982124 . - 0 ID=cds-WP_004140356.1;Parent=gene-LI478_RS14580;Dbxref=Genbank:WP_004140356.1;Name=WP_004140356.1;gbkey=CDS;gene=chbA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226432.1;locus_tag=LI478_RS14580;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIA;protein_id=WP_004140356.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2982178 2983536 . - . ID=gene-LI478_RS14585;Name=chbC;gbkey=Gene;gene=chbC;gene_biotype=protein_coding;locus_tag=LI478_RS14585 NZ_CP085478.1 Protein Homology CDS 2982178 2983536 . - 0 ID=cds-WP_004148091.1;Parent=gene-LI478_RS14585;Dbxref=Genbank:WP_004148091.1;Name=WP_004148091.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;gene=chbC;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460279.1;locus_tag=LI478_RS14585;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIC;protein_id=WP_004148091.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2983548 2983664 . - . ID=gene-LI478_RS14590;Name=LI478_RS14590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14590 NZ_CP085478.1 Protein Homology CDS 2983548 2983664 . - 0 ID=cds-WP_014907779.1;Parent=gene-LI478_RS14590;Dbxref=Genbank:WP_014907779.1;Name=WP_014907779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226429.1;locus_tag=LI478_RS14590;product=hypothetical protein;protein_id=WP_014907779.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2983684 2984004 . - . ID=gene-LI478_RS14595;Name=chbB;gbkey=Gene;gene=chbB;gene_biotype=protein_coding;locus_tag=LI478_RS14595 NZ_CP085478.1 Protein Homology CDS 2983684 2984004 . - 0 ID=cds-WP_002901547.1;Parent=gene-LI478_RS14595;Dbxref=Genbank:WP_002901547.1;Name=WP_002901547.1;gbkey=CDS;gene=chbB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226428.1;locus_tag=LI478_RS14595;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIB;protein_id=WP_002901547.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2984283 2984621 . - . ID=gene-LI478_RS14600;Name=osmE;gbkey=Gene;gene=osmE;gene_biotype=protein_coding;locus_tag=LI478_RS14600 NZ_CP085478.1 Protein Homology CDS 2984283 2984621 . - 0 ID=cds-WP_002901544.1;Parent=gene-LI478_RS14600;Dbxref=Genbank:WP_002901544.1;Name=WP_002901544.1;Ontology_term=GO:0019867;gbkey=CDS;gene=osmE;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226427.1;locus_tag=LI478_RS14600;product=osmotically-inducible lipoprotein OsmE;protein_id=WP_002901544.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2984904 2985731 . + . ID=gene-LI478_RS14605;Name=nadE;gbkey=Gene;gene=nadE;gene_biotype=protein_coding;locus_tag=LI478_RS14605 NZ_CP085478.1 Protein Homology CDS 2984904 2985731 . + 0 ID=cds-WP_025368232.1;Parent=gene-LI478_RS14605;Dbxref=Genbank:WP_025368232.1;Name=WP_025368232.1;Ontology_term=GO:0009435,GO:0003952,GO:0004359,GO:0008795;gbkey=CDS;gene=nadE;go_function=NAD+ synthase (glutamine-hydrolyzing) activity|0003952||IEA,glutaminase activity|0004359||IEA,NAD+ synthase activity|0008795||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226426.1;locus_tag=LI478_RS14605;product=ammonia-dependent NAD(+) synthetase;protein_id=WP_025368232.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2985832 2986695 . + . ID=gene-LI478_RS14610;Name=cho;gbkey=Gene;gene=cho;gene_biotype=protein_coding;locus_tag=LI478_RS14610 NZ_CP085478.1 Protein Homology CDS 2985832 2986695 . + 0 ID=cds-WP_004176514.1;Parent=gene-LI478_RS14610;Dbxref=Genbank:WP_004176514.1;Name=WP_004176514.1;gbkey=CDS;gene=cho;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226425.1;locus_tag=LI478_RS14610;product=excinuclease Cho;protein_id=WP_004176514.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2986783 2987268 . - . ID=gene-LI478_RS14615;Name=spy;gbkey=Gene;gene=spy;gene_biotype=protein_coding;locus_tag=LI478_RS14615 NZ_CP085478.1 Protein Homology CDS 2986783 2987268 . - 0 ID=cds-WP_004217130.1;Parent=gene-LI478_RS14615;Dbxref=Genbank:WP_004217130.1;Name=WP_004217130.1;Ontology_term=GO:0042597;gbkey=CDS;gene=spy;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226424.1;locus_tag=LI478_RS14615;product=ATP-independent periplasmic protein-refolding chaperone Spy;protein_id=WP_004217130.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2987612 2988577 . - . ID=gene-LI478_RS14620;Name=astE;gbkey=Gene;gene=astE;gene_biotype=protein_coding;locus_tag=LI478_RS14620 NZ_CP085478.1 Protein Homology CDS 2987612 2988577 . - 0 ID=cds-WP_004224242.1;Parent=gene-LI478_RS14620;Dbxref=Genbank:WP_004224242.1;Name=WP_004224242.1;Ontology_term=GO:0006527,GO:0009017;gbkey=CDS;gene=astE;go_function=succinylglutamate desuccinylase activity|0009017||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226422.1;locus_tag=LI478_RS14620;product=succinylglutamate desuccinylase;protein_id=WP_004224242.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2988587 2989912 . - . ID=gene-LI478_RS14625;Name=astB;gbkey=Gene;gene=astB;gene_biotype=protein_coding;locus_tag=LI478_RS14625 NZ_CP085478.1 Protein Homology CDS 2988587 2989912 . - 0 ID=cds-WP_029602481.1;Parent=gene-LI478_RS14625;Dbxref=Genbank:WP_029602481.1;Name=WP_029602481.1;Ontology_term=GO:0006527,GO:0009015;gbkey=CDS;gene=astB;go_function=N-succinylarginine dihydrolase activity|0009015||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226421.1;locus_tag=LI478_RS14625;product=N-succinylarginine dihydrolase;protein_id=WP_029602481.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2989909 2991387 . - . ID=gene-LI478_RS14630;Name=astD;gbkey=Gene;gene=astD;gene_biotype=protein_coding;locus_tag=LI478_RS14630 NZ_CP085478.1 Protein Homology CDS 2989909 2991387 . - 0 ID=cds-WP_049005581.1;Parent=gene-LI478_RS14630;Dbxref=Genbank:WP_049005581.1;Name=WP_049005581.1;Ontology_term=GO:0006527,GO:0016620;gbkey=CDS;gene=astD;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226420.1;locus_tag=LI478_RS14630;product=succinylglutamate-semialdehyde dehydrogenase;protein_id=WP_049005581.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2991384 2992418 . - . ID=gene-LI478_RS14635;Name=astA;gbkey=Gene;gene=astA;gene_biotype=protein_coding;locus_tag=LI478_RS14635 NZ_CP085478.1 Protein Homology CDS 2991384 2992418 . - 0 ID=cds-WP_004183681.1;Parent=gene-LI478_RS14635;Dbxref=Genbank:WP_004183681.1;Name=WP_004183681.1;Ontology_term=GO:0006527,GO:0008791;gbkey=CDS;gene=astA;go_function=arginine N-succinyltransferase activity|0008791||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226419.1;locus_tag=LI478_RS14635;product=arginine N-succinyltransferase;protein_id=WP_004183681.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2992415 2993635 . - . ID=gene-LI478_RS14640;Name=LI478_RS14640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14640 NZ_CP085478.1 Protein Homology CDS 2992415 2993635 . - 0 ID=cds-WP_002901489.1;Parent=gene-LI478_RS14640;Dbxref=Genbank:WP_002901489.1;Name=WP_002901489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226418.1;locus_tag=LI478_RS14640;product=aspartate aminotransferase family protein;protein_id=WP_002901489.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2994074 2994880 . + . ID=gene-LI478_RS14645;Name=xthA;gbkey=Gene;gene=xthA;gene_biotype=protein_coding;locus_tag=LI478_RS14645 NZ_CP085478.1 Protein Homology CDS 2994074 2994880 . + 0 ID=cds-WP_002901486.1;Parent=gene-LI478_RS14645;Dbxref=Genbank:WP_002901486.1;Name=WP_002901486.1;Ontology_term=GO:0006281,GO:0003677,GO:0004519,GO:0008853;gbkey=CDS;gene=xthA;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA,exodeoxyribonuclease III activity|0008853||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020804554.1;locus_tag=LI478_RS14645;product=exodeoxyribonuclease III;protein_id=WP_002901486.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2995094 2995750 . + . ID=gene-LI478_RS14650;Name=LI478_RS14650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14650 NZ_CP085478.1 Protein Homology CDS 2995094 2995750 . + 0 ID=cds-WP_004140389.1;Parent=gene-LI478_RS14650;Dbxref=Genbank:WP_004140389.1;Name=WP_004140389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004140389.1;locus_tag=LI478_RS14650;product=TVP38/TMEM64 family protein;protein_id=WP_004140389.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2995737 2996447 . + . ID=gene-LI478_RS14655;Name=LI478_RS14655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14655 NZ_CP085478.1 Protein Homology CDS 2995737 2996447 . + 0 ID=cds-WP_004151923.1;Parent=gene-LI478_RS14655;Dbxref=Genbank:WP_004151923.1;Name=WP_004151923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226414.1;locus_tag=LI478_RS14655;product=TVP38/TMEM64 family protein;protein_id=WP_004151923.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2996444 2997004 . + . ID=gene-LI478_RS14660;Name=LI478_RS14660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14660 NZ_CP085478.1 Protein Homology CDS 2996444 2997004 . + 0 ID=cds-WP_004176519.1;Parent=gene-LI478_RS14660;Dbxref=Genbank:WP_004176519.1;Name=WP_004176519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226413.1;locus_tag=LI478_RS14660;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_004176519.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2997007 2998185 . + . ID=gene-LI478_RS14665;Name=LI478_RS14665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14665 NZ_CP085478.1 Protein Homology CDS 2997007 2998185 . + 0 ID=cds-WP_040120427.1;Parent=gene-LI478_RS14665;Dbxref=Genbank:WP_040120427.1;Name=WP_040120427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226412.1;locus_tag=LI478_RS14665;product=ABC transporter substrate-binding protein;protein_id=WP_040120427.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2998158 2999693 . + . ID=gene-LI478_RS14670;Name=LI478_RS14670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14670 NZ_CP085478.1 Protein Homology CDS 2998158 2999693 . + 0 ID=cds-WP_021462889.1;Parent=gene-LI478_RS14670;Dbxref=Genbank:WP_021462889.1;Name=WP_021462889.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226411.1;locus_tag=LI478_RS14670;product=ABC transporter permease subunit;protein_id=WP_021462889.1;transl_table=11 NZ_CP085478.1 RefSeq gene 2999693 3000325 . + . ID=gene-LI478_RS14675;Name=LI478_RS14675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14675 NZ_CP085478.1 Protein Homology CDS 2999693 3000325 . + 0 ID=cds-WP_227394144.1;Parent=gene-LI478_RS14675;Dbxref=Genbank:WP_227394144.1;Name=WP_227394144.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226410.1;locus_tag=LI478_RS14675;product=ATP-binding cassette domain-containing protein;protein_id=WP_227394144.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3000419 3001726 . + . ID=gene-LI478_RS14680;Name=LI478_RS14680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14680 NZ_CP085478.1 Protein Homology CDS 3000419 3001726 . + 0 ID=cds-WP_048265419.1;Parent=gene-LI478_RS14680;Dbxref=Genbank:WP_048265419.1;Name=WP_048265419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226409.1;locus_tag=LI478_RS14680;product=sulfurtransferase;protein_id=WP_048265419.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3001778 3002401 . - . ID=gene-LI478_RS14685;Name=LI478_RS14685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14685 NZ_CP085478.1 Protein Homology CDS 3001778 3002401 . - 0 ID=cds-WP_002901398.1;Parent=gene-LI478_RS14685;Dbxref=Genbank:WP_002901398.1;Name=WP_002901398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226408.1;locus_tag=LI478_RS14685;product=CDP-alcohol phosphatidyltransferase family protein;protein_id=WP_002901398.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3002488 3002898 . + . ID=gene-LI478_RS14690;Name=LI478_RS14690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14690 NZ_CP085478.1 Protein Homology CDS 3002488 3002898 . + 0 ID=cds-WP_004183673.1;Parent=gene-LI478_RS14690;Dbxref=Genbank:WP_004183673.1;Name=WP_004183673.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226407.1;locus_tag=LI478_RS14690;product=pyrimidine (deoxy)nucleoside triphosphate diphosphatase;protein_id=WP_004183673.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3003081 3004424 . + . ID=gene-LI478_RS14695;Name=gdhA;gbkey=Gene;gene=gdhA;gene_biotype=protein_coding;locus_tag=LI478_RS14695 NZ_CP085478.1 Protein Homology CDS 3003081 3004424 . + 0 ID=cds-WP_004176526.1;Parent=gene-LI478_RS14695;Dbxref=Genbank:WP_004176526.1;Name=WP_004176526.1;Ontology_term=GO:0006520,GO:0016639;gbkey=CDS;gene=gdhA;go_function=oxidoreductase activity%2C acting on the CH-NH2 group of donors%2C NAD or NADP as acceptor|0016639||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226405.1;locus_tag=LI478_RS14695;product=NADP-specific glutamate dehydrogenase;protein_id=WP_004176526.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3004468 3005448 . - . ID=gene-LI478_RS14700;Name=LI478_RS14700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14700 NZ_CP085478.1 Protein Homology CDS 3004468 3005448 . - 0 ID=cds-WP_004140406.1;Parent=gene-LI478_RS14700;Dbxref=Genbank:WP_004140406.1;Name=WP_004140406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226404.1;locus_tag=LI478_RS14700;product=NAD(P)H-quinone oxidoreductase;protein_id=WP_004140406.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3005628 3007574 . - . ID=gene-LI478_RS14705;Name=LI478_RS14705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14705 NZ_CP085478.1 Protein Homology CDS 3005628 3007574 . - 0 ID=cds-WP_032414799.1;Parent=gene-LI478_RS14705;Dbxref=Genbank:WP_032414799.1;Name=WP_032414799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002901390.1;locus_tag=LI478_RS14705;product=DNA topoisomerase III;protein_id=WP_032414799.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3007579 3008622 . - . ID=gene-LI478_RS14710;Name=selD;gbkey=Gene;gene=selD;gene_biotype=protein_coding;locus_tag=LI478_RS14710 NZ_CP085478.1 Protein Homology CDS 3007579 3008622 . - 0 ID=cds-WP_004176528.1;Parent=gene-LI478_RS14710;Dbxref=Genbank:WP_004176528.1;Name=WP_004176528.1;Ontology_term=GO:0016260,GO:0004756;gbkey=CDS;gene=selD;go_function=selenide%2C water dikinase activity|0004756||IEA;go_process=selenocysteine biosynthetic process|0016260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226401.1;locus_tag=LI478_RS14710;product=selenide%2C water dikinase SelD;protein_id=WP_004176528.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3008848 3009594 . + . ID=gene-LI478_RS14715;Name=LI478_RS14715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14715 NZ_CP085478.1 Protein Homology CDS 3008848 3009594 . + 0 ID=cds-WP_002901387.1;Parent=gene-LI478_RS14715;Dbxref=Genbank:WP_002901387.1;Name=WP_002901387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226400.1;locus_tag=LI478_RS14715;product=phosphatase PAP2 family protein;protein_id=WP_002901387.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3010330 3010881 . - . ID=gene-LI478_RS14720;Name=LI478_RS14720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14720 NZ_CP085478.1 Protein Homology CDS 3010330 3010881 . - 0 ID=cds-WP_004176531.1;Parent=gene-LI478_RS14720;Dbxref=Genbank:WP_004176531.1;Name=WP_004176531.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226397.1;locus_tag=LI478_RS14720;product=NAD(P)H nitroreductase;protein_id=WP_004176531.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3011047 3012900 . + . ID=gene-LI478_RS14725;Name=sppA;gbkey=Gene;gene=sppA;gene_biotype=protein_coding;locus_tag=LI478_RS14725 NZ_CP085478.1 Protein Homology CDS 3011047 3012900 . + 0 ID=cds-WP_032414797.1;Parent=gene-LI478_RS14725;Dbxref=Genbank:WP_032414797.1;Name=WP_032414797.1;Ontology_term=GO:0006465,GO:0008233;gbkey=CDS;gene=sppA;go_function=peptidase activity|0008233||IEA;go_process=signal peptide processing|0006465||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226396.1;locus_tag=LI478_RS14725;product=signal peptide peptidase SppA;protein_id=WP_032414797.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3013039 3014058 . + . ID=gene-LI478_RS14730;Name=ansA;gbkey=Gene;gene=ansA;gene_biotype=protein_coding;locus_tag=LI478_RS14730 NZ_CP085478.1 Protein Homology CDS 3013039 3014058 . + 0 ID=cds-WP_002901285.1;Parent=gene-LI478_RS14730;Dbxref=Genbank:WP_002901285.1;Name=WP_002901285.1;Ontology_term=GO:0006520,GO:0004067;gbkey=CDS;gene=ansA;go_function=asparaginase activity|0004067||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226395.1;locus_tag=LI478_RS14730;product=asparaginase;protein_id=WP_002901285.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3014068 3014709 . + . ID=gene-LI478_RS14735;Name=pncA;gbkey=Gene;gene=pncA;gene_biotype=protein_coding;locus_tag=LI478_RS14735 NZ_CP085478.1 Protein Homology CDS 3014068 3014709 . + 0 ID=cds-WP_004892853.1;Parent=gene-LI478_RS14735;Dbxref=Genbank:WP_004892853.1;Name=WP_004892853.1;gbkey=CDS;gene=pncA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226394.1;locus_tag=LI478_RS14735;product=bifunctional nicotinamidase/pyrazinamidase;protein_id=WP_004892853.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3014880 3016133 . + . ID=gene-LI478_RS14740;Name=LI478_RS14740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14740 NZ_CP085478.1 Protein Homology CDS 3014880 3016133 . + 0 ID=cds-WP_032414795.1;Parent=gene-LI478_RS14740;Dbxref=Genbank:WP_032414795.1;Name=WP_032414795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226384.1;locus_tag=LI478_RS14740;product=glycoside hydrolase family 18 protein;protein_id=WP_032414795.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3016294 3016638 . + . ID=gene-LI478_RS14745;Name=yajD;gbkey=Gene;gene=yajD;gene_biotype=protein_coding;locus_tag=LI478_RS14745 NZ_CP085478.1 Protein Homology CDS 3016294 3016638 . + 0 ID=cds-WP_002901254.1;Parent=gene-LI478_RS14745;Dbxref=Genbank:WP_002901254.1;Name=WP_002901254.1;gbkey=CDS;gene=yajD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226383.1;locus_tag=LI478_RS14745;product=HNH nuclease YajD;protein_id=WP_002901254.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3016733 3017011 . - . ID=gene-LI478_RS14750;Name=LI478_RS14750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14750 NZ_CP085478.1 Protein Homology CDS 3016733 3017011 . - 0 ID=cds-WP_002901249.1;Parent=gene-LI478_RS14750;Dbxref=Genbank:WP_002901249.1;Name=WP_002901249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226382.1;locus_tag=LI478_RS14750;product=YeaC family protein;protein_id=WP_002901249.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3017055 3017468 . - . ID=gene-LI478_RS14755;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=protein_coding;locus_tag=LI478_RS14755 NZ_CP085478.1 Protein Homology CDS 3017055 3017468 . - 0 ID=cds-WP_002901246.1;Parent=gene-LI478_RS14755;Dbxref=Genbank:WP_002901246.1;Name=WP_002901246.1;Ontology_term=GO:0006979,GO:0030091,GO:0033743;gbkey=CDS;gene=msrB;go_function=peptide-methionine (R)-S-oxide reductase activity|0033743||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226381.1;locus_tag=LI478_RS14755;product=peptide-methionine (R)-S-oxide reductase MsrB;protein_id=WP_002901246.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3017807 3018802 . + . ID=gene-LI478_RS14760;Name=gapA;gbkey=Gene;gene=gapA;gene_biotype=protein_coding;locus_tag=LI478_RS14760 NZ_CP085478.1 Protein Homology CDS 3017807 3018802 . + 0 ID=cds-WP_002901243.1;Parent=gene-LI478_RS14760;Dbxref=Genbank:WP_002901243.1;Name=WP_002901243.1;gbkey=CDS;gene=gapA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006322611.1;locus_tag=LI478_RS14760;product=glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_002901243.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3018877 3019761 . + . ID=gene-LI478_RS14765;Name=LI478_RS14765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14765 NZ_CP085478.1 Protein Homology CDS 3018877 3019761 . + 0 ID=cds-WP_002901240.1;Parent=gene-LI478_RS14765;Dbxref=Genbank:WP_002901240.1;Name=WP_002901240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226379.1;locus_tag=LI478_RS14765;product=D-hexose-6-phosphate mutarotase;protein_id=WP_002901240.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3019818 3020672 . - . ID=gene-LI478_RS14770;Name=LI478_RS14770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14770 NZ_CP085478.1 Protein Homology CDS 3019818 3020672 . - 0 ID=cds-WP_004213141.1;Parent=gene-LI478_RS14770;Dbxref=Genbank:WP_004213141.1;Name=WP_004213141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014599128.1;locus_tag=LI478_RS14770;product=aldo/keto reductase;protein_id=WP_004213141.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3020764 3021510 . - . ID=gene-LI478_RS14775;Name=LI478_RS14775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14775 NZ_CP085478.1 Protein Homology CDS 3020764 3021510 . - 0 ID=cds-WP_002901236.1;Parent=gene-LI478_RS14775;Dbxref=Genbank:WP_002901236.1;Name=WP_002901236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226377.1;locus_tag=LI478_RS14775;product=MipA/OmpV family protein;protein_id=WP_002901236.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3021927 3023861 . + . ID=gene-LI478_RS14780;Name=yeaG;gbkey=Gene;gene=yeaG;gene_biotype=protein_coding;locus_tag=LI478_RS14780 NZ_CP085478.1 Protein Homology CDS 3021927 3023861 . + 0 ID=cds-WP_002901234.1;Parent=gene-LI478_RS14780;Dbxref=Genbank:WP_002901234.1;Name=WP_002901234.1;gbkey=CDS;gene=yeaG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226376.1;locus_tag=LI478_RS14780;product=protein kinase YeaG;protein_id=WP_002901234.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3023947 3025230 . + . ID=gene-LI478_RS14785;Name=LI478_RS14785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14785 NZ_CP085478.1 Protein Homology CDS 3023947 3025230 . + 0 ID=cds-WP_004152363.1;Parent=gene-LI478_RS14785;Dbxref=Genbank:WP_004152363.1;Name=WP_004152363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226375.1;locus_tag=LI478_RS14785;product=YeaH/YhbH family protein;protein_id=WP_004152363.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3025276 3025839 . - . ID=gene-LI478_RS14790;Name=LI478_RS14790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14790 NZ_CP085478.1 Protein Homology CDS 3025276 3025839 . - 0 ID=cds-WP_002901231.1;Parent=gene-LI478_RS14790;Dbxref=Genbank:WP_002901231.1;Name=WP_002901231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226374.1;locus_tag=LI478_RS14790;product=hypothetical protein;protein_id=WP_002901231.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3025998 3026480 . + . ID=gene-LI478_RS14795;Name=LI478_RS14795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14795 NZ_CP085478.1 Protein Homology CDS 3025998 3026480 . + 0 ID=cds-WP_016529621.1;Parent=gene-LI478_RS14795;Dbxref=Genbank:WP_016529621.1;Name=WP_016529621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016529621.1;locus_tag=LI478_RS14795;product=glutathione peroxidase;protein_id=WP_016529621.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3026602 3026913 . - . ID=gene-LI478_RS14800;Name=LI478_RS14800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14800 NZ_CP085478.1 Protein Homology CDS 3026602 3026913 . - 0 ID=cds-WP_016946410.1;Parent=gene-LI478_RS14800;Dbxref=Genbank:WP_016946410.1;Name=WP_016946410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226372.1;locus_tag=LI478_RS14800;product=hypothetical protein;protein_id=WP_016946410.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3026981 3027100 . + . ID=gene-LI478_RS14805;Name=LI478_RS14805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14805 NZ_CP085478.1 Protein Homology CDS 3026981 3027100 . + 0 ID=cds-WP_004220356.1;Parent=gene-LI478_RS14805;Dbxref=Genbank:WP_004220356.1;Name=WP_004220356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226371.1;locus_tag=LI478_RS14805;product=hypothetical protein;protein_id=WP_004220356.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3027171 3028052 . - . ID=gene-LI478_RS14810;Name=LI478_RS14810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14810 NZ_CP085478.1 Protein Homology CDS 3027171 3028052 . - 0 ID=cds-WP_009309126.1;Parent=gene-LI478_RS14810;Dbxref=Genbank:WP_009309126.1;Name=WP_009309126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226370.1;locus_tag=LI478_RS14810;product=LysR family transcriptional regulator;protein_id=WP_009309126.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3028228 3029445 . + . ID=gene-LI478_RS14815;Name=LI478_RS14815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14815 NZ_CP085478.1 Protein Homology CDS 3028228 3029445 . + 0 ID=cds-WP_032419081.1;Parent=gene-LI478_RS14815;Dbxref=Genbank:WP_032419081.1;Name=WP_032419081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226369.1;locus_tag=LI478_RS14815;product=MFS transporter;protein_id=WP_032419081.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3029442 3030191 . - . ID=gene-LI478_RS14820;Name=LI478_RS14820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14820 NZ_CP085478.1 Protein Homology CDS 3029442 3030191 . - 0 ID=cds-WP_004213132.1;Parent=gene-LI478_RS14820;Dbxref=Genbank:WP_004213132.1;Name=WP_004213132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226368.1;locus_tag=LI478_RS14820;product=SDR family oxidoreductase;protein_id=WP_004213132.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3030358 3031263 . + . ID=gene-LI478_RS14825;Name=LI478_RS14825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14825 NZ_CP085478.1 Protein Homology CDS 3030358 3031263 . + 0 ID=cds-WP_004140447.1;Parent=gene-LI478_RS14825;Dbxref=Genbank:WP_004140447.1;Name=WP_004140447.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226367.1;locus_tag=LI478_RS14825;product=LysR family transcriptional regulator;protein_id=WP_004140447.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3031270 3032535 . - . ID=gene-LI478_RS14830;Name=LI478_RS14830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14830 NZ_CP085478.1 Protein Homology CDS 3031270 3032535 . - 0 ID=cds-WP_004183665.1;Parent=gene-LI478_RS14830;Dbxref=Genbank:WP_004183665.1;Name=WP_004183665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226366.1;locus_tag=LI478_RS14830;product=Y-family DNA polymerase;protein_id=WP_004183665.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3032538 3032957 . - . ID=gene-LI478_RS14835;Name=LI478_RS14835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14835 NZ_CP085478.1 Protein Homology CDS 3032538 3032957 . - 0 ID=cds-WP_002901192.1;Parent=gene-LI478_RS14835;Dbxref=Genbank:WP_002901192.1;Name=WP_002901192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226365.1;locus_tag=LI478_RS14835;product=translesion error-prone DNA polymerase V autoproteolytic subunit;protein_id=WP_002901192.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3033228 3033470 . + . ID=gene-LI478_RS14840;Name=LI478_RS14840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14840 NZ_CP085478.1 Protein Homology CDS 3033228 3033470 . + 0 ID=cds-WP_002901096.1;Parent=gene-LI478_RS14840;Dbxref=Genbank:WP_002901096.1;Name=WP_002901096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226363.1;locus_tag=LI478_RS14840;product=DinI family protein;protein_id=WP_002901096.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3033641 3034777 . - . ID=gene-LI478_RS14845;Name=LI478_RS14845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14845 NZ_CP085478.1 Protein Homology CDS 3033641 3034777 . - 0 ID=cds-WP_074185292.1;Parent=gene-LI478_RS14845;Dbxref=Genbank:WP_074185292.1;Name=WP_074185292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226362.1;locus_tag=LI478_RS14845;product=glycosyltransferase family 9 protein;protein_id=WP_074185292.1;transl_table=11 NZ_CP085478.1 RefSeq pseudogene 3034772 3034928 . + . ID=gene-LI478_RS14850;Name=LI478_RS14850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS14850;pseudo=true NZ_CP085478.1 Protein Homology CDS 3034772 3034928 . + 0 ID=cds-LI478_RS14850;Parent=gene-LI478_RS14850;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226361.1;locus_tag=LI478_RS14850;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP085478.1 RefSeq gene 3035024 3035524 . + . ID=gene-LI478_RS14855;Name=LI478_RS14855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14855 NZ_CP085478.1 Protein Homology CDS 3035024 3035524 . + 0 ID=cds-WP_004213129.1;Parent=gene-LI478_RS14855;Dbxref=Genbank:WP_004213129.1;Name=WP_004213129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226360.1;locus_tag=LI478_RS14855;product=YbaK/prolyl-tRNA synthetase associated domain-containing protein;protein_id=WP_004213129.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3035641 3036087 . + . ID=gene-LI478_RS14860;Name=LI478_RS14860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14860 NZ_CP085478.1 Protein Homology CDS 3035641 3036087 . + 0 ID=cds-WP_002901080.1;Parent=gene-LI478_RS14860;Dbxref=Genbank:WP_002901080.1;Name=WP_002901080.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226359.1;locus_tag=LI478_RS14860;product=DUF441 domain-containing protein;protein_id=WP_002901080.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3036071 3036865 . - . ID=gene-LI478_RS14865;Name=LI478_RS14865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14865 NZ_CP085478.1 Protein Homology CDS 3036071 3036865 . - 0 ID=cds-WP_004140469.1;Parent=gene-LI478_RS14865;Dbxref=Genbank:WP_004140469.1;Name=WP_004140469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226358.1;locus_tag=LI478_RS14865;product=helix-turn-helix transcriptional regulator;protein_id=WP_004140469.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3036973 3038148 . + . ID=gene-LI478_RS14870;Name=LI478_RS14870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14870 NZ_CP085478.1 Protein Homology CDS 3036973 3038148 . + 0 ID=cds-WP_020324105.1;Parent=gene-LI478_RS14870;Dbxref=Genbank:WP_020324105.1;Name=WP_020324105.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226357.1;locus_tag=LI478_RS14870;product=CynX/NimT family MFS transporter;protein_id=WP_020324105.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3038180 3038872 . - . ID=gene-LI478_RS14875;Name=LI478_RS14875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14875 NZ_CP085478.1 Protein Homology CDS 3038180 3038872 . - 0 ID=cds-WP_004140471.1;Parent=gene-LI478_RS14875;Dbxref=Genbank:WP_004140471.1;Name=WP_004140471.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226356.1;locus_tag=LI478_RS14875;product=CTP synthase;protein_id=WP_004140471.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3039018 3039527 . + . ID=gene-LI478_RS14880;Name=LI478_RS14880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14880 NZ_CP085478.1 Protein Homology CDS 3039018 3039527 . + 0 ID=cds-WP_004176547.1;Parent=gene-LI478_RS14880;Dbxref=Genbank:WP_004176547.1;Name=WP_004176547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226355.1;locus_tag=LI478_RS14880;product=DUF523 domain-containing protein;protein_id=WP_004176547.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3039532 3039870 . + . ID=gene-LI478_RS14885;Name=LI478_RS14885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14885 NZ_CP085478.1 Protein Homology CDS 3039532 3039870 . + 0 ID=cds-WP_014343000.1;Parent=gene-LI478_RS14885;Dbxref=Genbank:WP_014343000.1;Name=WP_014343000.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226354.1;locus_tag=LI478_RS14885;product=DUF488 family protein;protein_id=WP_014343000.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3039860 3040099 . - . ID=gene-LI478_RS14890;Name=LI478_RS14890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14890 NZ_CP085478.1 Protein Homology CDS 3039860 3040099 . - 0 ID=cds-WP_004176548.1;Parent=gene-LI478_RS14890;Dbxref=Genbank:WP_004176548.1;Name=WP_004176548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226353.1;locus_tag=LI478_RS14890;product=DUF333 domain-containing protein;protein_id=WP_004176548.1;transl_table=11 NZ_CP085478.1 RefSeq pseudogene 3040369 3040647 . - . ID=gene-LI478_RS14895;Name=LI478_RS14895;end_range=3040647,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS14895;partial=true;pseudo=true NZ_CP085478.1 Protein Homology CDS 3040369 3040647 . - 0 ID=cds-LI478_RS14895;Parent=gene-LI478_RS14895;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=3040647,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611476.1;locus_tag=LI478_RS14895;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP085478.1 RefSeq pseudogene 3040671 3040948 . + . ID=gene-LI478_RS14900;Name=LI478_RS14900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS14900;partial=true;pseudo=true;start_range=.,3040671 NZ_CP085478.1 Protein Homology CDS 3040671 3040948 . + 0 ID=cds-LI478_RS14900;Parent=gene-LI478_RS14900;Note=gpQ%3B Q protein%3B structural capsid protein%3B bacteriophage P2-like virions include a head and a tail%3B Q is a connector or portal protein that joins phage head and tail%3B Q%2C P and M proteins are needed to package DNA into proheads and for the conversion of proheads to capsids%3B frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000043651.1;locus_tag=LI478_RS14900;partial=true;product=phage portal protein;pseudo=true;start_range=.,3040671;transl_table=11 NZ_CP085478.1 RefSeq gene 3041702 3042136 . + . ID=gene-LI478_RS14905;Name=LI478_RS14905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14905 NZ_CP085478.1 GeneMarkS-2+ CDS 3041702 3042136 . + 0 ID=cds-WP_048332989.1;Parent=gene-LI478_RS14905;Dbxref=Genbank:WP_048332989.1;Name=WP_048332989.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LI478_RS14905;product=hypothetical protein;protein_id=WP_048332989.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3042138 3044825 . + . ID=gene-LI478_RS14910;Name=LI478_RS14910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14910 NZ_CP085478.1 Protein Homology CDS 3042138 3044825 . + 0 ID=cds-WP_048332990.1;Parent=gene-LI478_RS14910;Dbxref=Genbank:WP_048332990.1;Name=WP_048332990.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025001.2;locus_tag=LI478_RS14910;product=AAA family ATPase;protein_id=WP_048332990.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3045309 3046442 . - . ID=gene-LI478_RS14915;Name=LI478_RS14915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14915 NZ_CP085478.1 Protein Homology CDS 3045309 3046442 . - 0 ID=cds-WP_077254445.1;Parent=gene-LI478_RS14915;Dbxref=Genbank:WP_077254445.1;Name=WP_077254445.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611504.1;locus_tag=LI478_RS14915;product=IS3 family transposase;protein_id=WP_077254445.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3046757 3047770 . + . ID=gene-LI478_RS14920;Name=LI478_RS14920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14920 NZ_CP085478.1 Protein Homology CDS 3046757 3047770 . + 0 ID=cds-WP_004176549.1;Parent=gene-LI478_RS14920;Dbxref=Genbank:WP_004176549.1;Name=WP_004176549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226352.1;locus_tag=LI478_RS14920;product=sensor domain-containing diguanylate cyclase;protein_id=WP_004176549.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3047828 3047929 . + . ID=gene-LI478_RS14925;Name=LI478_RS14925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14925 NZ_CP085478.1 Protein Homology CDS 3047828 3047929 . + 0 ID=cds-WP_064153521.1;Parent=gene-LI478_RS14925;Dbxref=Genbank:WP_064153521.1;Name=WP_064153521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004150782.1;locus_tag=LI478_RS14925;product=YoaK family small membrane protein;protein_id=WP_064153521.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3048121 3048246 . + . ID=gene-LI478_RS14935;Name=LI478_RS14935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14935 NZ_CP085478.1 Protein Homology CDS 3048121 3048246 . + 0 ID=cds-WP_004140488.1;Parent=gene-LI478_RS14935;Dbxref=Genbank:WP_004140488.1;Name=WP_004140488.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226350.1;locus_tag=LI478_RS14935;product=hypothetical protein;protein_id=WP_004140488.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3048306 3048569 . - . ID=gene-LI478_RS14940;Name=LI478_RS14940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14940 NZ_CP085478.1 Protein Homology CDS 3048306 3048569 . - 0 ID=cds-WP_004140489.1;Parent=gene-LI478_RS14940;Dbxref=Genbank:WP_004140489.1;Name=WP_004140489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226349.1;locus_tag=LI478_RS14940;product=DUF2534 family protein;protein_id=WP_004140489.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3048700 3049338 . - . ID=gene-LI478_RS14945;Name=leuE;gbkey=Gene;gene=leuE;gene_biotype=protein_coding;locus_tag=LI478_RS14945 NZ_CP085478.1 Protein Homology CDS 3048700 3049338 . - 0 ID=cds-WP_004150783.1;Parent=gene-LI478_RS14945;Dbxref=Genbank:WP_004150783.1;Name=WP_004150783.1;Ontology_term=GO:0006865;gbkey=CDS;gene=leuE;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226348.1;locus_tag=LI478_RS14945;product=leucine efflux protein LeuE;protein_id=WP_004150783.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3049428 3050342 . - . ID=gene-LI478_RS14950;Name=lpxP;gbkey=Gene;gene=lpxP;gene_biotype=protein_coding;locus_tag=LI478_RS14950 NZ_CP085478.1 Protein Homology CDS 3049428 3050342 . - 0 ID=cds-WP_004148038.1;Parent=gene-LI478_RS14950;Dbxref=Genbank:WP_004148038.1;Name=WP_004148038.1;Ontology_term=GO:0009409,GO:0036104,GO:0008951,GO:0016020;gbkey=CDS;gene=lpxP;go_component=membrane|0016020||IEA;go_function=palmitoleoyl [acyl-carrier-protein]-dependent acyltransferase activity|0008951||IEA;go_process=response to cold|0009409||IEA,Kdo2-lipid A biosynthetic process|0036104||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226347.1;locus_tag=LI478_RS14950;product=kdo(2)-lipid IV(A) palmitoleoyltransferase;protein_id=WP_004148038.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3051004 3052047 . - . ID=gene-LI478_RS14955;Name=fraE;gbkey=Gene;gene=fraE;gene_biotype=protein_coding;locus_tag=LI478_RS14955 NZ_CP085478.1 Protein Homology CDS 3051004 3052047 . - 0 ID=cds-WP_004150784.1;Parent=gene-LI478_RS14955;Dbxref=Genbank:WP_004150784.1;Name=WP_004150784.1;gbkey=CDS;gene=fraE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226344.1;locus_tag=LI478_RS14955;product=fructose-asparagine asparaginase;protein_id=WP_004150784.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3052350 3053558 . + . ID=gene-LI478_RS14960;Name=LI478_RS14960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14960 NZ_CP085478.1 Protein Homology CDS 3052350 3053558 . + 0 ID=cds-WP_004140494.1;Parent=gene-LI478_RS14960;Dbxref=Genbank:WP_004140494.1;Name=WP_004140494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226343.1;locus_tag=LI478_RS14960;product=HD domain-containing protein;protein_id=WP_004140494.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3053632 3055416 . + . ID=gene-LI478_RS14965;Name=LI478_RS14965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14965 NZ_CP085478.1 Protein Homology CDS 3053632 3055416 . + 0 ID=cds-WP_032414790.1;Parent=gene-LI478_RS14965;Dbxref=Genbank:WP_032414790.1;Name=WP_032414790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226342.1;locus_tag=LI478_RS14965;product=sensor domain-containing diguanylate cyclase;protein_id=WP_032414790.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3055423 3056313 . - . ID=gene-LI478_RS14970;Name=LI478_RS14970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14970 NZ_CP085478.1 Protein Homology CDS 3055423 3056313 . - 0 ID=cds-WP_004150788.1;Parent=gene-LI478_RS14970;Dbxref=Genbank:WP_004150788.1;Name=WP_004150788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226341.1;locus_tag=LI478_RS14970;product=LysR substrate-binding domain-containing protein;protein_id=WP_004150788.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3056434 3057942 . + . ID=gene-LI478_RS14975;Name=LI478_RS14975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14975 NZ_CP085478.1 Protein Homology CDS 3056434 3057942 . + 0 ID=cds-WP_004140497.1;Parent=gene-LI478_RS14975;Dbxref=Genbank:WP_004140497.1;Name=WP_004140497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226340.1;locus_tag=LI478_RS14975;product=UbiD family decarboxylase;protein_id=WP_004140497.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3057976 3058140 . + . ID=gene-LI478_RS14980;Name=LI478_RS14980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14980 NZ_CP085478.1 Protein Homology CDS 3057976 3058140 . + 0 ID=cds-WP_020804938.1;Parent=gene-LI478_RS14980;Dbxref=Genbank:WP_020804938.1;Name=WP_020804938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226339.1;locus_tag=LI478_RS14980;product=hypothetical protein;protein_id=WP_020804938.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3058253 3058939 . - . ID=gene-LI478_RS14985;Name=LI478_RS14985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14985 NZ_CP085478.1 Protein Homology CDS 3058253 3058939 . - 0 ID=cds-WP_004150790.1;Parent=gene-LI478_RS14985;Dbxref=Genbank:WP_004150790.1;Name=WP_004150790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226338.1;locus_tag=LI478_RS14985;product=EAL domain-containing protein;protein_id=WP_004150790.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3059337 3059516 . - . ID=gene-LI478_RS14990;Name=LI478_RS14990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14990 NZ_CP085478.1 Protein Homology CDS 3059337 3059516 . - 0 ID=cds-WP_004140501.1;Parent=gene-LI478_RS14990;Dbxref=Genbank:WP_004140501.1;Name=WP_004140501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226337.1;locus_tag=LI478_RS14990;product=hypothetical protein;protein_id=WP_004140501.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3059556 3060188 . - . ID=gene-LI478_RS14995;Name=LI478_RS14995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS14995 NZ_CP085478.1 Protein Homology CDS 3059556 3060188 . - 0 ID=cds-WP_004150791.1;Parent=gene-LI478_RS14995;Dbxref=Genbank:WP_004150791.1;Name=WP_004150791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226336.1;locus_tag=LI478_RS14995;product=DNA-binding protein;protein_id=WP_004150791.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3060755 3060952 . + . ID=gene-LI478_RS15000;Name=LI478_RS15000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15000 NZ_CP085478.1 Protein Homology CDS 3060755 3060952 . + 0 ID=cds-WP_004140506.1;Parent=gene-LI478_RS15000;Dbxref=Genbank:WP_004140506.1;Name=WP_004140506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226335.1;locus_tag=LI478_RS15000;product=hypothetical protein;protein_id=WP_004140506.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3061068 3062078 . - . ID=gene-LI478_RS15005;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=LI478_RS15005 NZ_CP085478.1 Protein Homology CDS 3061068 3062078 . - 0 ID=cds-WP_004183659.1;Parent=gene-LI478_RS15005;Dbxref=Genbank:WP_004183659.1;Name=WP_004183659.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydB;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226334.1;locus_tag=LI478_RS15005;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_004183659.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3062075 3063481 . - . ID=gene-LI478_RS15010;Name=LI478_RS15010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15010 NZ_CP085478.1 Protein Homology CDS 3062075 3063481 . - 0 ID=cds-WP_048983197.1;Parent=gene-LI478_RS15010;Dbxref=Genbank:WP_048983197.1;Name=WP_048983197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009308425.1;locus_tag=LI478_RS15010;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_048983197.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3063537 3064424 . - . ID=gene-LI478_RS15015;Name=LI478_RS15015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15015 NZ_CP085478.1 Protein Homology CDS 3063537 3064424 . - 0 ID=cds-WP_004179357.1;Parent=gene-LI478_RS15015;Dbxref=Genbank:WP_004179357.1;Name=WP_004179357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226332.1;locus_tag=LI478_RS15015;product=manganese catalase family protein;protein_id=WP_004179357.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3064441 3064947 . - . ID=gene-LI478_RS15020;Name=LI478_RS15020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15020 NZ_CP085478.1 Protein Homology CDS 3064441 3064947 . - 0 ID=cds-WP_004140514.1;Parent=gene-LI478_RS15020;Dbxref=Genbank:WP_004140514.1;Name=WP_004140514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226331.1;locus_tag=LI478_RS15020;product=ferritin-like domain-containing protein;protein_id=WP_004140514.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3064974 3065468 . - . ID=gene-LI478_RS15025;Name=LI478_RS15025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15025 NZ_CP085478.1 Protein Homology CDS 3064974 3065468 . - 0 ID=cds-WP_004148027.1;Parent=gene-LI478_RS15025;Dbxref=Genbank:WP_004148027.1;Name=WP_004148027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226330.1;locus_tag=LI478_RS15025;product=ferritin-like domain-containing protein;protein_id=WP_004148027.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3065559 3065744 . - . ID=gene-LI478_RS15030;Name=LI478_RS15030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15030 NZ_CP085478.1 Protein Homology CDS 3065559 3065744 . - 0 ID=cds-WP_004150795.1;Parent=gene-LI478_RS15030;Dbxref=Genbank:WP_004150795.1;Name=WP_004150795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227107.1;locus_tag=LI478_RS15030;product=general stress protein;protein_id=WP_004150795.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3066369 3067562 . + . ID=gene-LI478_RS15035;Name=LI478_RS15035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15035 NZ_CP085478.1 Protein Homology CDS 3066369 3067562 . + 0 ID=cds-WP_023286245.1;Parent=gene-LI478_RS15035;Dbxref=Genbank:WP_023286245.1;Name=WP_023286245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226327.1;locus_tag=LI478_RS15035;product=glutathione-dependent formaldehyde dehydrogenase;protein_id=WP_023286245.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3067675 3067902 . + . ID=gene-LI478_RS15040;Name=LI478_RS15040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15040 NZ_CP085478.1 Protein Homology CDS 3067675 3067902 . + 0 ID=cds-WP_004140530.1;Parent=gene-LI478_RS15040;Dbxref=Genbank:WP_004140530.1;Name=WP_004140530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004140530.1;locus_tag=LI478_RS15040;product=DUF1272 domain-containing protein;protein_id=WP_004140530.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3068056 3068232 . + . ID=gene-LI478_RS15045;Name=LI478_RS15045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15045 NZ_CP085478.1 Protein Homology CDS 3068056 3068232 . + 0 ID=cds-WP_032415655.1;Parent=gene-LI478_RS15045;Dbxref=Genbank:WP_032415655.1;Name=WP_032415655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226325.1;locus_tag=LI478_RS15045;product=hypothetical protein;protein_id=WP_032415655.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3068352 3068675 . + . ID=gene-LI478_RS15050;Name=LI478_RS15050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15050 NZ_CP085478.1 Protein Homology CDS 3068352 3068675 . + 0 ID=cds-WP_008807712.1;Parent=gene-LI478_RS15050;Dbxref=Genbank:WP_008807712.1;Name=WP_008807712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226324.1;locus_tag=LI478_RS15050;product=antibiotic biosynthesis monooxygenase;protein_id=WP_008807712.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3068668 3069060 . + . ID=gene-LI478_RS15055;Name=LI478_RS15055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15055 NZ_CP085478.1 Protein Homology CDS 3068668 3069060 . + 0 ID=cds-WP_023159861.1;Parent=gene-LI478_RS15055;Dbxref=Genbank:WP_023159861.1;Name=WP_023159861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226323.1;locus_tag=LI478_RS15055;product=ACT domain protein;protein_id=WP_023159861.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3069057 3069770 . + . ID=gene-LI478_RS15060;Name=LI478_RS15060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15060 NZ_CP085478.1 Protein Homology CDS 3069057 3069770 . + 0 ID=cds-WP_032414785.1;Parent=gene-LI478_RS15060;Dbxref=Genbank:WP_032414785.1;Name=WP_032414785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226322.1;locus_tag=LI478_RS15060;product=winged helix-turn-helix domain-containing protein;protein_id=WP_032414785.1;transl_table=11 NZ_CP085478.1 RefSeq pseudogene 3070043 3070210 . - . ID=gene-LI478_RS15065;Name=LI478_RS15065;end_range=3070210,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS15065;partial=true;pseudo=true NZ_CP085478.1 Protein Homology CDS 3070043 3070210 . - 0 ID=cds-LI478_RS15065;Parent=gene-LI478_RS15065;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0016616;end_range=3070210,.;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000444467.1;locus_tag=LI478_RS15065;partial=true;product=isocitrate/isopropylmalate family dehydrogenase;pseudo=true;transl_table=11 NZ_CP085478.1 RefSeq gene 3070516 3070839 . - . ID=gene-LI478_RS15070;Name=LI478_RS15070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15070 NZ_CP085478.1 Protein Homology CDS 3070516 3070839 . - 0 ID=cds-WP_074185219.1;Parent=gene-LI478_RS15070;Dbxref=Genbank:WP_074185219.1;Name=WP_074185219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228924.1;locus_tag=LI478_RS15070;product=hypothetical protein;protein_id=WP_074185219.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3071091 3072059 . + . ID=gene-LI478_RS15075;Name=LI478_RS15075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15075 NZ_CP085478.1 Protein Homology CDS 3071091 3072059 . + 0 ID=cds-WP_004225014.1-6;Parent=gene-LI478_RS15075;Dbxref=Genbank:WP_004225014.1;Name=WP_004225014.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=LI478_RS15075;product=IS5 family transposase;protein_id=WP_004225014.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3072096 3072602 . - . ID=gene-LI478_RS15080;Name=LI478_RS15080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15080 NZ_CP085478.1 GeneMarkS-2+ CDS 3072096 3072602 . - 0 ID=cds-WP_227394145.1;Parent=gene-LI478_RS15080;Dbxref=Genbank:WP_227394145.1;Name=WP_227394145.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LI478_RS15080;product=diguanylate phosphodiesterase;protein_id=WP_227394145.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3072957 3074015 . - . ID=gene-LI478_RS15085;Name=LI478_RS15085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15085 NZ_CP085478.1 Protein Homology CDS 3072957 3074015 . - 0 ID=cds-WP_004224164.1;Parent=gene-LI478_RS15085;Dbxref=Genbank:WP_004224164.1;Name=WP_004224164.1;Ontology_term=GO:0009966,GO:0009975;gbkey=CDS;go_function=cyclase activity|0009975||IEA;go_process=regulation of signal transduction|0009966||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004131484.1;locus_tag=LI478_RS15085;product=sensor domain-containing diguanylate cyclase;protein_id=WP_004224164.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3074438 3075865 . - . ID=gene-LI478_RS15090;Name=LI478_RS15090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15090 NZ_CP085478.1 Protein Homology CDS 3074438 3075865 . - 0 ID=cds-WP_064277435.1;Parent=gene-LI478_RS15090;Dbxref=Genbank:WP_064277435.1;Name=WP_064277435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228921.1;locus_tag=LI478_RS15090;product=tail fiber domain-containing protein;protein_id=WP_064277435.1;transl_table=11 NZ_CP085478.1 RefSeq pseudogene 3075934 3088644 . - . ID=gene-LI478_RS15095;Name=LI478_RS15095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS15095;pseudo=true NZ_CP085478.1 Protein Homology CDS 3075934 3088644 . - 0 ID=cds-LI478_RS15095;Parent=gene-LI478_RS15095;Note=internal stop;Ontology_term=GO:0016798;gbkey=CDS;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228920.1;locus_tag=LI478_RS15095;product=carbohydrate binding domain-containing protein;pseudo=true;transl_table=11 NZ_CP085478.1 RefSeq gene 3088707 3089318 . - . ID=gene-LI478_RS15100;Name=LI478_RS15100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15100 NZ_CP085478.1 Protein Homology CDS 3088707 3089318 . - 0 ID=cds-WP_014228919.1;Parent=gene-LI478_RS15100;Dbxref=Genbank:WP_014228919.1;Name=WP_014228919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228919.1;locus_tag=LI478_RS15100;product=tail assembly protein;protein_id=WP_014228919.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3089334 3089684 . - . ID=gene-LI478_RS15105;Name=LI478_RS15105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15105 NZ_CP085478.1 GeneMarkS-2+ CDS 3089334 3089684 . - 0 ID=cds-WP_021462612.1;Parent=gene-LI478_RS15105;Dbxref=Genbank:WP_021462612.1;Name=WP_021462612.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LI478_RS15105;product=hypothetical protein;protein_id=WP_021462612.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3089716 3090426 . - . ID=gene-LI478_RS15110;Name=LI478_RS15110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15110 NZ_CP085478.1 Protein Homology CDS 3089716 3090426 . - 0 ID=cds-WP_021462611.1;Parent=gene-LI478_RS15110;Dbxref=Genbank:WP_021462611.1;Name=WP_021462611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004122964.1;locus_tag=LI478_RS15110;product=C40 family peptidase;protein_id=WP_021462611.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3090428 3091183 . - . ID=gene-LI478_RS15115;Name=LI478_RS15115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15115 NZ_CP085478.1 Protein Homology CDS 3090428 3091183 . - 0 ID=cds-WP_021462610.1;Parent=gene-LI478_RS15115;Dbxref=Genbank:WP_021462610.1;Name=WP_021462610.1;Ontology_term=GO:0016032,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008322438.1;locus_tag=LI478_RS15115;product=phage minor tail protein L;protein_id=WP_021462610.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3091180 3091518 . - . ID=gene-LI478_RS15120;Name=LI478_RS15120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15120 NZ_CP085478.1 Protein Homology CDS 3091180 3091518 . - 0 ID=cds-WP_017880254.1;Parent=gene-LI478_RS15120;Dbxref=Genbank:WP_017880254.1;Name=WP_017880254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017898999.1;locus_tag=LI478_RS15120;product=phage tail protein;protein_id=WP_017880254.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3091518 3094853 . - . ID=gene-LI478_RS15125;Name=LI478_RS15125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15125 NZ_CP085478.1 Protein Homology CDS 3091518 3094853 . - 0 ID=cds-WP_064277455.1;Parent=gene-LI478_RS15125;Dbxref=Genbank:WP_064277455.1;Name=WP_064277455.1;Ontology_term=GO:0016032,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015974459.1;locus_tag=LI478_RS15125;product=phage tail tape measure protein;protein_id=WP_064277455.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3095086 3095451 . - . ID=gene-LI478_RS15130;Name=LI478_RS15130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15130 NZ_CP085478.1 Protein Homology CDS 3095086 3095451 . - 0 ID=cds-WP_064277433.1;Parent=gene-LI478_RS15130;Dbxref=Genbank:WP_064277433.1;Name=WP_064277433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004148015.1;locus_tag=LI478_RS15130;product=phage tail protein;protein_id=WP_064277433.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3095509 3095970 . - . ID=gene-LI478_RS15135;Name=LI478_RS15135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15135 NZ_CP085478.1 Protein Homology CDS 3095509 3095970 . - 0 ID=cds-WP_014228913.1;Parent=gene-LI478_RS15135;Dbxref=Genbank:WP_014228913.1;Name=WP_014228913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228913.1;locus_tag=LI478_RS15135;product=major tail shaft subunit;protein_id=WP_014228913.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3096002 3096403 . - . ID=gene-LI478_RS15140;Name=LI478_RS15140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15140 NZ_CP085478.1 Protein Homology CDS 3096002 3096403 . - 0 ID=cds-WP_017898997.1;Parent=gene-LI478_RS15140;Dbxref=Genbank:WP_017898997.1;Name=WP_017898997.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003832376.1;locus_tag=LI478_RS15140;product=HK97 gp10 family phage protein;protein_id=WP_017898997.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3096400 3096789 . - . ID=gene-LI478_RS15145;Name=LI478_RS15145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15145 NZ_CP085478.1 Protein Homology CDS 3096400 3096789 . - 0 ID=cds-WP_048263894.1;Parent=gene-LI478_RS15145;Dbxref=Genbank:WP_048263894.1;Name=WP_048263894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017880258.1;locus_tag=LI478_RS15145;product=hypothetical protein;protein_id=WP_048263894.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3096770 3097108 . - . ID=gene-LI478_RS15150;Name=LI478_RS15150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15150 NZ_CP085478.1 Protein Homology CDS 3096770 3097108 . - 0 ID=cds-WP_064277432.1;Parent=gene-LI478_RS15150;Dbxref=Genbank:WP_064277432.1;Name=WP_064277432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017880259.1;locus_tag=LI478_RS15150;product=head-tail adaptor protein;protein_id=WP_064277432.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3097105 3097422 . - . ID=gene-LI478_RS15155;Name=LI478_RS15155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15155 NZ_CP085478.1 Protein Homology CDS 3097105 3097422 . - 0 ID=cds-WP_020317538.1;Parent=gene-LI478_RS15155;Dbxref=Genbank:WP_020317538.1;Name=WP_020317538.1;Ontology_term=GO:0016032;gbkey=CDS;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016160674.1;locus_tag=LI478_RS15155;product=head-tail connector protein;protein_id=WP_020317538.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3097403 3097675 . - . ID=gene-LI478_RS15160;Name=LI478_RS15160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15160 NZ_CP085478.1 Protein Homology CDS 3097403 3097675 . - 0 ID=cds-WP_064172829.1;Parent=gene-LI478_RS15160;Dbxref=Genbank:WP_064172829.1;Name=WP_064172829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016160673.1;locus_tag=LI478_RS15160;product=hypothetical protein;protein_id=WP_064172829.1;transl_table=11 NZ_CP085478.1 RefSeq pseudogene 3097734 3099020 . - . ID=gene-LI478_RS15165;Name=LI478_RS15165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS15165;pseudo=true NZ_CP085478.1 Protein Homology CDS 3097734 3099020 . - 0 ID=cds-LI478_RS15165;Parent=gene-LI478_RS15165;Note=internal stop;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: protein motif:HMM:TIGR01554.2;locus_tag=LI478_RS15165;product=phage major capsid protein;pseudo=true;transl_table=11 NZ_CP085478.1 RefSeq gene 3099098 3100018 . - . ID=gene-LI478_RS15170;Name=LI478_RS15170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15170 NZ_CP085478.1 Protein Homology CDS 3099098 3100018 . - 0 ID=cds-WP_040174256.1;Parent=gene-LI478_RS15170;Dbxref=Genbank:WP_040174256.1;Name=WP_040174256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015974509.1;locus_tag=LI478_RS15170;product=S49 family peptidase;protein_id=WP_040174256.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3100055 3101314 . - . ID=gene-LI478_RS15175;Name=LI478_RS15175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15175 NZ_CP085478.1 Protein Homology CDS 3100055 3101314 . - 0 ID=cds-WP_064277430.1;Parent=gene-LI478_RS15175;Dbxref=Genbank:WP_064277430.1;Name=WP_064277430.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004148010.1;locus_tag=LI478_RS15175;product=phage portal protein;protein_id=WP_064277430.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3101314 3101493 . - . ID=gene-LI478_RS15180;Name=LI478_RS15180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15180 NZ_CP085478.1 Protein Homology CDS 3101314 3101493 . - 0 ID=cds-WP_017898992.1;Parent=gene-LI478_RS15180;Dbxref=Genbank:WP_017898992.1;Name=WP_017898992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017898992.1;locus_tag=LI478_RS15180;product=hypothetical protein;protein_id=WP_017898992.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3101487 3103208 . - . ID=gene-LI478_RS15185;Name=LI478_RS15185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15185 NZ_CP085478.1 Protein Homology CDS 3101487 3103208 . - 0 ID=cds-WP_021462603.1;Parent=gene-LI478_RS15185;Dbxref=Genbank:WP_021462603.1;Name=WP_021462603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228904.1;locus_tag=LI478_RS15185;product=terminase large subunit;protein_id=WP_021462603.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3103208 3103642 . - . ID=gene-LI478_RS15190;Name=LI478_RS15190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15190 NZ_CP085478.1 Protein Homology CDS 3103208 3103642 . - 0 ID=cds-WP_012542168.1;Parent=gene-LI478_RS15190;Dbxref=Genbank:WP_012542168.1;Name=WP_012542168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012542168.1;locus_tag=LI478_RS15190;product=phage terminase small subunit P27 family;protein_id=WP_012542168.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3103890 3104321 . - . ID=gene-LI478_RS15195;Name=LI478_RS15195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15195 NZ_CP085478.1 Protein Homology CDS 3103890 3104321 . - 0 ID=cds-WP_023279521.1;Parent=gene-LI478_RS15195;Dbxref=Genbank:WP_023279521.1;Name=WP_023279521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012542169.1;locus_tag=LI478_RS15195;product=hypothetical protein;protein_id=WP_023279521.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3104318 3104635 . - . ID=gene-LI478_RS15200;Name=LI478_RS15200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15200 NZ_CP085478.1 Protein Homology CDS 3104318 3104635 . - 0 ID=cds-WP_016160653.1;Parent=gene-LI478_RS15200;Dbxref=Genbank:WP_016160653.1;Name=WP_016160653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228902.1;locus_tag=LI478_RS15200;product=hypothetical protein;protein_id=WP_016160653.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3104587 3104949 . - . ID=gene-LI478_RS15205;Name=LI478_RS15205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15205 NZ_CP085478.1 Protein Homology CDS 3104587 3104949 . - 0 ID=cds-WP_014228901.1;Parent=gene-LI478_RS15205;Dbxref=Genbank:WP_014228901.1;Name=WP_014228901.1;Ontology_term=GO:0003676,GO:0004519;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001135225.1;locus_tag=LI478_RS15205;product=HNH endonuclease;protein_id=WP_014228901.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3106073 3106423 . - . ID=gene-LI478_RS15210;Name=LI478_RS15210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15210 NZ_CP085478.1 Protein Homology CDS 3106073 3106423 . - 0 ID=cds-WP_022065713.1;Parent=gene-LI478_RS15210;Dbxref=Genbank:WP_022065713.1;Name=WP_022065713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016160650.1;locus_tag=LI478_RS15210;product=hypothetical protein;protein_id=WP_022065713.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3106420 3106917 . - . ID=gene-LI478_RS15215;Name=LI478_RS15215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15215 NZ_CP085478.1 Protein Homology CDS 3106420 3106917 . - 0 ID=cds-WP_064151301.1;Parent=gene-LI478_RS15215;Dbxref=Genbank:WP_064151301.1;Name=WP_064151301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001135281.1;locus_tag=LI478_RS15215;product=lysozyme;protein_id=WP_064151301.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3106917 3107132 . - . ID=gene-LI478_RS15220;Name=LI478_RS15220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15220 NZ_CP085478.1 Protein Homology CDS 3106917 3107132 . - 0 ID=cds-WP_017880269.1;Parent=gene-LI478_RS15220;Dbxref=Genbank:WP_017880269.1;Name=WP_017880269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416074.4;locus_tag=LI478_RS15220;product=class II holin family protein;protein_id=WP_017880269.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3108025 3109056 . + . ID=gene-LI478_RS15225;Name=LI478_RS15225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15225 NZ_CP085478.1 Protein Homology CDS 3108025 3109056 . + 0 ID=cds-WP_022064937.1;Parent=gene-LI478_RS15225;Dbxref=Genbank:WP_022064937.1;Name=WP_022064937.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000043971.1;locus_tag=LI478_RS15225;product=hypothetical protein;protein_id=WP_022064937.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3109049 3109588 . + . ID=gene-LI478_RS15230;Name=LI478_RS15230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15230 NZ_CP085478.1 Protein Homology CDS 3109049 3109588 . + 0 ID=cds-WP_022064936.1;Parent=gene-LI478_RS15230;Dbxref=Genbank:WP_022064936.1;Name=WP_022064936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001485461.1;locus_tag=LI478_RS15230;product=hypothetical protein;protein_id=WP_022064936.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3109610 3109951 . - . ID=gene-LI478_RS15235;Name=LI478_RS15235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15235 NZ_CP085478.1 Protein Homology CDS 3109610 3109951 . - 0 ID=cds-WP_064277416.1;Parent=gene-LI478_RS15235;Dbxref=Genbank:WP_064277416.1;Name=WP_064277416.1;Ontology_term=GO:0060567,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=negative regulation of termination of DNA-templated transcription|0060567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001205460.1;locus_tag=LI478_RS15235;product=antiterminator Q family protein;protein_id=WP_064277416.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3109964 3110995 . - . ID=gene-LI478_RS15240;Name=LI478_RS15240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15240 NZ_CP085478.1 Protein Homology CDS 3109964 3110995 . - 0 ID=cds-WP_022065891.1;Parent=gene-LI478_RS15240;Dbxref=Genbank:WP_022065891.1;Name=WP_022065891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020315049.1;locus_tag=LI478_RS15240;product=DUF968 domain-containing protein;protein_id=WP_022065891.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3111195 3111587 . - . ID=gene-LI478_RS15245;Name=LI478_RS15245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15245 NZ_CP085478.1 Protein Homology CDS 3111195 3111587 . - 0 ID=cds-WP_077266720.1;Parent=gene-LI478_RS15245;Dbxref=Genbank:WP_077266720.1;Name=WP_077266720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016160645.1;locus_tag=LI478_RS15245;product=DNA-binding protein;protein_id=WP_077266720.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3111628 3111885 . - . ID=gene-LI478_RS15250;Name=LI478_RS15250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15250 NZ_CP085478.1 Protein Homology CDS 3111628 3111885 . - 0 ID=cds-WP_226328045.1;Parent=gene-LI478_RS15250;Dbxref=Genbank:WP_226328045.1;Name=WP_226328045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016150441.1;locus_tag=LI478_RS15250;product=hypothetical protein;protein_id=WP_226328045.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3111930 3112163 . - . ID=gene-LI478_RS15255;Name=LI478_RS15255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15255 NZ_CP085478.1 Protein Homology CDS 3111930 3112163 . - 0 ID=cds-WP_023279529.1;Parent=gene-LI478_RS15255;Dbxref=Genbank:WP_023279529.1;Name=WP_023279529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012542186.1;locus_tag=LI478_RS15255;product=DinI family protein;protein_id=WP_023279529.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3112516 3113220 . + . ID=gene-LI478_RS15260;Name=LI478_RS15260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15260 NZ_CP085478.1 Protein Homology CDS 3112516 3113220 . + 0 ID=cds-WP_025368264.1;Parent=gene-LI478_RS15260;Dbxref=Genbank:WP_025368264.1;Name=WP_025368264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016528966.1;locus_tag=LI478_RS15260;product=hypothetical protein;protein_id=WP_025368264.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3113544 3114674 . - . ID=gene-LI478_RS15265;Name=LI478_RS15265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15265 NZ_CP085478.1 Protein Homology CDS 3113544 3114674 . - 0 ID=cds-WP_064277415.1;Parent=gene-LI478_RS15265;Dbxref=Genbank:WP_064277415.1;Name=WP_064277415.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013798.2;locus_tag=LI478_RS15265;product=macro domain-containing protein;protein_id=WP_064277415.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3114668 3116011 . - . ID=gene-LI478_RS15270;Name=LI478_RS15270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15270 NZ_CP085478.1 Protein Homology CDS 3114668 3116011 . - 0 ID=cds-WP_064277414.1;Parent=gene-LI478_RS15270;Dbxref=Genbank:WP_064277414.1;Name=WP_064277414.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025840.2;locus_tag=LI478_RS15270;product=DarT ssDNA thymidine ADP-ribosyltransferase family protein;protein_id=WP_064277414.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3116293 3116733 . - . ID=gene-LI478_RS15275;Name=LI478_RS15275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15275 NZ_CP085478.1 Protein Homology CDS 3116293 3116733 . - 0 ID=cds-WP_032735221.1;Parent=gene-LI478_RS15275;Dbxref=Genbank:WP_032735221.1;Name=WP_032735221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016528969.1;locus_tag=LI478_RS15275;product=hypothetical protein;protein_id=WP_032735221.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3116747 3117292 . - . ID=gene-LI478_RS15280;Name=LI478_RS15280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15280 NZ_CP085478.1 Protein Homology CDS 3116747 3117292 . - 0 ID=cds-WP_223175350.1;Parent=gene-LI478_RS15280;Dbxref=Genbank:WP_223175350.1;Name=WP_223175350.1;Ontology_term=GO:0006270;gbkey=CDS;go_process=DNA replication initiation|0006270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016160640.1;locus_tag=LI478_RS15280;product=replication protein P;protein_id=WP_223175350.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3117204 3118187 . - . ID=gene-LI478_RS15285;Name=LI478_RS15285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15285 NZ_CP085478.1 Protein Homology CDS 3117204 3118187 . - 0 ID=cds-WP_064277411.1;Parent=gene-LI478_RS15285;Dbxref=Genbank:WP_064277411.1;Name=WP_064277411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012542197.1;locus_tag=LI478_RS15285;product=DnaT-like ssDNA-binding domain-containing protein;protein_id=WP_064277411.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3118239 3118793 . - . ID=gene-LI478_RS15290;Name=LI478_RS15290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15290 NZ_CP085478.1 Protein Homology CDS 3118239 3118793 . - 0 ID=cds-WP_017898969.1;Parent=gene-LI478_RS15290;Dbxref=Genbank:WP_017898969.1;Name=WP_017898969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228885.1;locus_tag=LI478_RS15290;product=toxin YdaT family protein;protein_id=WP_017898969.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3118796 3119017 . - . ID=gene-LI478_RS15295;Name=LI478_RS15295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15295 NZ_CP085478.1 Protein Homology CDS 3118796 3119017 . - 0 ID=cds-WP_004147982.1;Parent=gene-LI478_RS15295;Dbxref=Genbank:WP_004147982.1;Name=WP_004147982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001172789.1;locus_tag=LI478_RS15295;product=YdaS family helix-turn-helix protein;protein_id=WP_004147982.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3119198 3119542 . + . ID=gene-LI478_RS15300;Name=LI478_RS15300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15300 NZ_CP085478.1 Protein Homology CDS 3119198 3119542 . + 0 ID=cds-WP_223175349.1;Parent=gene-LI478_RS15300;Dbxref=Genbank:WP_223175349.1;Name=WP_223175349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016150454.1;locus_tag=LI478_RS15300;product=transcriptional regulator;protein_id=WP_223175349.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3119817 3119939 . + . ID=gene-LI478_RS26470;Name=LI478_RS26470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS26470 NZ_CP085478.1 GeneMarkS-2+ CDS 3119817 3119939 . + 0 ID=cds-WP_014228882.1;Parent=gene-LI478_RS26470;Dbxref=Genbank:WP_014228882.1;Name=WP_014228882.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LI478_RS26470;product=hypothetical protein;protein_id=WP_014228882.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3120359 3120553 . + . ID=gene-LI478_RS15305;Name=LI478_RS15305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15305 NZ_CP085478.1 Protein Homology CDS 3120359 3120553 . + 0 ID=cds-WP_016160636.1;Parent=gene-LI478_RS15305;Dbxref=Genbank:WP_016160636.1;Name=WP_016160636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020803219.1;locus_tag=LI478_RS15305;product=DUF1482 family protein;protein_id=WP_016160636.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3120608 3120940 . + . ID=gene-LI478_RS15310;Name=LI478_RS15310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15310 NZ_CP085478.1 Protein Homology CDS 3120608 3120940 . + 0 ID=cds-WP_223168510.1;Parent=gene-LI478_RS15310;Dbxref=Genbank:WP_223168510.1;Name=WP_223168510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014907829.1;locus_tag=LI478_RS15310;product=Rrf2 family transcriptional regulator;protein_id=WP_223168510.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3121082 3123220 . + . ID=gene-LI478_RS15315;Name=LI478_RS15315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15315 NZ_CP085478.1 Protein Homology CDS 3121082 3123220 . + 0 ID=cds-WP_064277410.1;Parent=gene-LI478_RS15315;Dbxref=Genbank:WP_064277410.1;Name=WP_064277410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004147979.1;locus_tag=LI478_RS15315;product=exonuclease;protein_id=WP_064277410.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3123273 3123518 . + . ID=gene-LI478_RS15320;Name=LI478_RS15320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15320 NZ_CP085478.1 Protein Homology CDS 3123273 3123518 . + 0 ID=cds-WP_012542206.1;Parent=gene-LI478_RS15320;Dbxref=Genbank:WP_012542206.1;Name=WP_012542206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012542206.1;locus_tag=LI478_RS15320;product=excisionase;protein_id=WP_012542206.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3123499 3124626 . + . ID=gene-LI478_RS15325;Name=LI478_RS15325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15325 NZ_CP085478.1 Protein Homology CDS 3123499 3124626 . + 0 ID=cds-WP_226339834.1;Parent=gene-LI478_RS15325;Dbxref=Genbank:WP_226339834.1;Name=WP_226339834.1;Ontology_term=GO:0015074,GO:0003677,GO:0008907;gbkey=CDS;go_function=DNA binding|0003677||IEA,integrase activity|0008907||IEA;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415658.1;locus_tag=LI478_RS15325;product=site-specific integrase;protein_id=WP_226339834.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3124744 3125994 . - . ID=gene-LI478_RS15330;Name=icd;gbkey=Gene;gene=icd;gene_biotype=protein_coding;locus_tag=LI478_RS15330 NZ_CP085478.1 Protein Homology CDS 3124744 3125994 . - 0 ID=cds-WP_004150800.1;Parent=gene-LI478_RS15330;Dbxref=Genbank:WP_004150800.1;Name=WP_004150800.1;Ontology_term=GO:0006099,GO:0000287,GO:0004450,GO:0051287;gbkey=CDS;gene=icd;go_function=magnesium ion binding|0000287||IEA,isocitrate dehydrogenase (NADP+) activity|0004450||IEA,NAD binding|0051287||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000444467.1;locus_tag=LI478_RS15330;product=NADP-dependent isocitrate dehydrogenase;protein_id=WP_004150800.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3126235 3126885 . + . ID=gene-LI478_RS15335;Name=rluE;gbkey=Gene;gene=rluE;gene_biotype=protein_coding;locus_tag=LI478_RS15335 NZ_CP085478.1 Protein Homology CDS 3126235 3126885 . + 0 ID=cds-WP_064153515.1;Parent=gene-LI478_RS15335;Dbxref=Genbank:WP_064153515.1;Name=WP_064153515.1;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;gene=rluE;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226320.1;locus_tag=LI478_RS15335;product=23S rRNA pseudouridine(2457) synthase RluE;protein_id=WP_064153515.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3126903 3127361 . + . ID=gene-LI478_RS15340;Name=LI478_RS15340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15340 NZ_CP085478.1 Protein Homology CDS 3126903 3127361 . + 0 ID=cds-WP_023282363.1;Parent=gene-LI478_RS15340;Dbxref=Genbank:WP_023282363.1;Name=WP_023282363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226319.1;locus_tag=LI478_RS15340;product=NUDIX hydrolase;protein_id=WP_023282363.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3127418 3128524 . + . ID=gene-LI478_RS15345;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;locus_tag=LI478_RS15345 NZ_CP085478.1 Protein Homology CDS 3127418 3128524 . + 0 ID=cds-WP_004150803.1;Parent=gene-LI478_RS15345;Dbxref=Genbank:WP_004150803.1;Name=WP_004150803.1;Ontology_term=GO:0002143,GO:0006396,GO:0004808,GO:0016783,GO:0005737;gbkey=CDS;gene=mnmA;go_component=cytoplasm|0005737||IEA;go_function=tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity|0004808||IEA,sulfurtransferase activity|0016783||IEA;go_process=tRNA wobble position uridine thiolation|0002143||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226318.1;locus_tag=LI478_RS15345;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=WP_004150803.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3128579 3129220 . + . ID=gene-LI478_RS15350;Name=hflD;gbkey=Gene;gene=hflD;gene_biotype=protein_coding;locus_tag=LI478_RS15350 NZ_CP085478.1 Protein Homology CDS 3128579 3129220 . + 0 ID=cds-WP_004140557.1;Parent=gene-LI478_RS15350;Dbxref=Genbank:WP_004140557.1;Name=WP_004140557.1;gbkey=CDS;gene=hflD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226317.1;locus_tag=LI478_RS15350;product=high frequency lysogenization protein HflD;protein_id=WP_004140557.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3129224 3130594 . + . ID=gene-LI478_RS15355;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=LI478_RS15355 NZ_CP085478.1 Protein Homology CDS 3129224 3130594 . + 0 ID=cds-WP_004176557.1;Parent=gene-LI478_RS15355;Dbxref=Genbank:WP_004176557.1;Name=WP_004176557.1;Ontology_term=GO:0006188,GO:0009152,GO:0004018;gbkey=CDS;gene=purB;go_function=N6-(1%2C2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity|0004018||IEA;go_process=IMP biosynthetic process|0006188||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002950897.1;locus_tag=LI478_RS15355;product=adenylosuccinate lyase;protein_id=WP_004176557.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3130649 3131011 . - . ID=gene-LI478_RS15360;Name=LI478_RS15360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15360 NZ_CP085478.1 Protein Homology CDS 3130649 3131011 . - 0 ID=cds-WP_004176558.1;Parent=gene-LI478_RS15360;Dbxref=Genbank:WP_004176558.1;Name=WP_004176558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226315.1;locus_tag=LI478_RS15360;product=cupin domain-containing protein;protein_id=WP_004176558.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3131095 3131901 . - . ID=gene-LI478_RS15365;Name=LI478_RS15365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15365 NZ_CP085478.1 Protein Homology CDS 3131095 3131901 . - 0 ID=cds-WP_004179353.1;Parent=gene-LI478_RS15365;Dbxref=Genbank:WP_004179353.1;Name=WP_004179353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226314.1;locus_tag=LI478_RS15365;product=AraC family transcriptional regulator;protein_id=WP_004179353.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3132184 3132855 . + . ID=gene-LI478_RS15370;Name=phoP;gbkey=Gene;gene=phoP;gene_biotype=protein_coding;locus_tag=LI478_RS15370 NZ_CP085478.1 Protein Homology CDS 3132184 3132855 . + 0 ID=cds-WP_004150807.1;Parent=gene-LI478_RS15370;Dbxref=Genbank:WP_004150807.1;Name=WP_004150807.1;gbkey=CDS;gene=phoP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226313.1;locus_tag=LI478_RS15370;product=two-component system response regulator PhoP;protein_id=WP_004150807.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3132855 3134321 . + . ID=gene-LI478_RS15375;Name=phoQ;gbkey=Gene;gene=phoQ;gene_biotype=protein_coding;locus_tag=LI478_RS15375 NZ_CP085478.1 Protein Homology CDS 3132855 3134321 . + 0 ID=cds-WP_004147969.1;Parent=gene-LI478_RS15375;Dbxref=Genbank:WP_004147969.1;Name=WP_004147969.1;Ontology_term=GO:0000160,GO:0000155,GO:0004673,GO:0016772;gbkey=CDS;gene=phoQ;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226312.1;locus_tag=LI478_RS15375;product=two-component system sensor histidine kinase PhoQ;protein_id=WP_004147969.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3134407 3135528 . + . ID=gene-LI478_RS15380;Name=LI478_RS15380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15380 NZ_CP085478.1 Protein Homology CDS 3134407 3135528 . + 0 ID=cds-WP_004176560.1;Parent=gene-LI478_RS15380;Dbxref=Genbank:WP_004176560.1;Name=WP_004176560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226311.1;locus_tag=LI478_RS15380;product=cupin domain-containing protein;protein_id=WP_004176560.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3135668 3136900 . - . ID=gene-LI478_RS15385;Name=pepT;gbkey=Gene;gene=pepT;gene_biotype=protein_coding;locus_tag=LI478_RS15385 NZ_CP085478.1 Protein Homology CDS 3135668 3136900 . - 0 ID=cds-WP_032414783.1;Parent=gene-LI478_RS15385;Dbxref=Genbank:WP_032414783.1;Name=WP_032414783.1;Ontology_term=GO:0006508,GO:0045148;gbkey=CDS;gene=pepT;go_function=tripeptide aminopeptidase activity|0045148||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226310.1;locus_tag=LI478_RS15385;product=peptidase T;protein_id=WP_032414783.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3137159 3138295 . + . ID=gene-LI478_RS15390;Name=potA;gbkey=Gene;gene=potA;gene_biotype=protein_coding;locus_tag=LI478_RS15390 NZ_CP085478.1 Protein Homology CDS 3137159 3138295 . + 0 ID=cds-WP_004150811.1;Parent=gene-LI478_RS15390;Dbxref=Genbank:WP_004150811.1;Name=WP_004150811.1;Ontology_term=GO:0015846,GO:0005524,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=potA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226309.1;locus_tag=LI478_RS15390;product=spermidine/putrescine ABC transporter ATP-binding protein PotA;protein_id=WP_004150811.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3138279 3139136 . + . ID=gene-LI478_RS15395;Name=potB;gbkey=Gene;gene=potB;gene_biotype=protein_coding;locus_tag=LI478_RS15395 NZ_CP085478.1 Protein Homology CDS 3138279 3139136 . + 0 ID=cds-WP_064153512.1;Parent=gene-LI478_RS15395;Dbxref=Genbank:WP_064153512.1;Name=WP_064153512.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=potB;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226308.1;locus_tag=LI478_RS15395;product=spermidine/putrescine ABC transporter permease PotB;protein_id=WP_064153512.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3139133 3139918 . + . ID=gene-LI478_RS15400;Name=potC;gbkey=Gene;gene=potC;gene_biotype=protein_coding;locus_tag=LI478_RS15400 NZ_CP085478.1 Protein Homology CDS 3139133 3139918 . + 0 ID=cds-WP_004150813.1;Parent=gene-LI478_RS15400;Dbxref=Genbank:WP_004150813.1;Name=WP_004150813.1;Ontology_term=GO:0055085;gbkey=CDS;gene=potC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226307.1;locus_tag=LI478_RS15400;product=spermidine/putrescine ABC transporter permease PotC;protein_id=WP_004150813.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3139915 3140961 . + . ID=gene-LI478_RS15405;Name=potD;gbkey=Gene;gene=potD;gene_biotype=protein_coding;locus_tag=LI478_RS15405 NZ_CP085478.1 Protein Homology CDS 3139915 3140961 . + 0 ID=cds-WP_004140590.1;Parent=gene-LI478_RS15405;Dbxref=Genbank:WP_004140590.1;Name=WP_004140590.1;Ontology_term=GO:0015846,GO:0019808,GO:0042597;gbkey=CDS;gene=potD;go_component=periplasmic space|0042597||IEA;go_function=polyamine binding|0019808||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121082.1;locus_tag=LI478_RS15405;product=spermidine/putrescine ABC transporter substrate-binding protein PotD;protein_id=WP_004140590.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3141007 3142731 . - . ID=gene-LI478_RS15410;Name=LI478_RS15410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15410 NZ_CP085478.1 Protein Homology CDS 3141007 3142731 . - 0 ID=cds-WP_029602492.1;Parent=gene-LI478_RS15410;Dbxref=Genbank:WP_029602492.1;Name=WP_029602492.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226305.1;locus_tag=LI478_RS15410;product=aldehyde dehydrogenase family protein;protein_id=WP_029602492.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3142728 3144356 . - . ID=gene-LI478_RS15415;Name=LI478_RS15415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15415 NZ_CP085478.1 Protein Homology CDS 3142728 3144356 . - 0 ID=cds-WP_004183652.1;Parent=gene-LI478_RS15415;Dbxref=Genbank:WP_004183652.1;Name=WP_004183652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020804477.1;locus_tag=LI478_RS15415;product=long-chain fatty acid--CoA ligase;protein_id=WP_004183652.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3144594 3146597 . - . ID=gene-LI478_RS15420;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=LI478_RS15420 NZ_CP085478.1 Protein Homology CDS 3144594 3146597 . - 0 ID=cds-WP_048333010.1;Parent=gene-LI478_RS15420;Dbxref=Genbank:WP_048333010.1;Name=WP_048333010.1;Ontology_term=GO:0006098,GO:0004802,GO:0005737;gbkey=CDS;gene=tkt;go_component=cytoplasm|0005737||IEA;go_function=transketolase activity|0004802||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017146112.1;locus_tag=LI478_RS15420;product=transketolase;protein_id=WP_048333010.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3146617 3147567 . - . ID=gene-LI478_RS15425;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=LI478_RS15425 NZ_CP085478.1 Protein Homology CDS 3146617 3147567 . - 0 ID=cds-WP_032414779.1;Parent=gene-LI478_RS15425;Dbxref=Genbank:WP_032414779.1;Name=WP_032414779.1;Ontology_term=GO:0006098,GO:0004801;gbkey=CDS;gene=tal;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016807641.1;locus_tag=LI478_RS15425;product=transaldolase;protein_id=WP_032414779.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3147598 3148056 . - . ID=gene-LI478_RS15430;Name=rpiB;gbkey=Gene;gene=rpiB;gene_biotype=protein_coding;locus_tag=LI478_RS15430 NZ_CP085478.1 Protein Homology CDS 3147598 3148056 . - 0 ID=cds-WP_004140598.1;Parent=gene-LI478_RS15430;Dbxref=Genbank:WP_004140598.1;Name=WP_004140598.1;Ontology_term=GO:0009052,GO:0004751;gbkey=CDS;gene=rpiB;go_function=ribose-5-phosphate isomerase activity|0004751||IEA;go_process=pentose-phosphate shunt%2C non-oxidative branch|0009052||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015367158.1;locus_tag=LI478_RS15430;product=ribose 5-phosphate isomerase B;protein_id=WP_004140598.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3148085 3148459 . - . ID=gene-LI478_RS15435;Name=LI478_RS15435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15435 NZ_CP085478.1 Protein Homology CDS 3148085 3148459 . - 0 ID=cds-WP_004140600.1;Parent=gene-LI478_RS15435;Dbxref=Genbank:WP_004140600.1;Name=WP_004140600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016160623.1;locus_tag=LI478_RS15435;product=PTS glucitol/sorbitol transporter subunit IIA;protein_id=WP_004140600.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3148461 3149480 . - . ID=gene-LI478_RS15440;Name=LI478_RS15440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15440 NZ_CP085478.1 Protein Homology CDS 3148461 3149480 . - 0 ID=cds-WP_064153097.1;Parent=gene-LI478_RS15440;Dbxref=Genbank:WP_064153097.1;Name=WP_064153097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004190951.1;locus_tag=LI478_RS15440;product=2-keto-3-deoxygluconate permease;protein_id=WP_064153097.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3149573 3151291 . - . ID=gene-LI478_RS15445;Name=LI478_RS15445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15445 NZ_CP085478.1 Protein Homology CDS 3149573 3151291 . - 0 ID=cds-WP_023286236.1;Parent=gene-LI478_RS15445;Dbxref=Genbank:WP_023286236.1;Name=WP_023286236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012968563.1;locus_tag=LI478_RS15445;product=four-carbon acid sugar kinase family protein;protein_id=WP_023286236.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3151327 3152334 . - . ID=gene-LI478_RS15450;Name=pdxA;gbkey=Gene;gene=pdxA;gene_biotype=protein_coding;locus_tag=LI478_RS15450 NZ_CP085478.1 Protein Homology CDS 3151327 3152334 . - 0 ID=cds-WP_032415653.1;Parent=gene-LI478_RS15450;Dbxref=Genbank:WP_032415653.1;Name=WP_032415653.1;gbkey=CDS;gene=pdxA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008806010.1;locus_tag=LI478_RS15450;product=4-hydroxythreonine-4-phosphate dehydrogenase PdxA;protein_id=WP_032415653.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3152577 3153371 . + . ID=gene-LI478_RS15455;Name=LI478_RS15455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15455 NZ_CP085478.1 Protein Homology CDS 3152577 3153371 . + 0 ID=cds-WP_004211823.1;Parent=gene-LI478_RS15455;Dbxref=Genbank:WP_004211823.1;Name=WP_004211823.1;Ontology_term=GO:0004807;gbkey=CDS;go_function=triose-phosphate isomerase activity|0004807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195954.1;locus_tag=LI478_RS15455;product=triose-phosphate isomerase;protein_id=WP_004211823.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3153407 3154369 . + . ID=gene-LI478_RS15460;Name=LI478_RS15460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15460 NZ_CP085478.1 Protein Homology CDS 3153407 3154369 . + 0 ID=cds-WP_004140612.1;Parent=gene-LI478_RS15460;Dbxref=Genbank:WP_004140612.1;Name=WP_004140612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020324988.1;locus_tag=LI478_RS15460;product=sugar-binding transcriptional regulator;protein_id=WP_004140612.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3154394 3154738 . - . ID=gene-LI478_RS15465;Name=LI478_RS15465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15465 NZ_CP085478.1 Protein Homology CDS 3154394 3154738 . - 0 ID=cds-WP_004183647.1;Parent=gene-LI478_RS15465;Dbxref=Genbank:WP_004183647.1;Name=WP_004183647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226302.1;locus_tag=LI478_RS15465;product=hypothetical protein;protein_id=WP_004183647.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3154829 3155659 . - . ID=gene-LI478_RS15470;Name=cobB;gbkey=Gene;gene=cobB;gene_biotype=protein_coding;locus_tag=LI478_RS15470 NZ_CP085478.1 Protein Homology CDS 3154829 3155659 . - 0 ID=cds-WP_004176563.1;Parent=gene-LI478_RS15470;Dbxref=Genbank:WP_004176563.1;Name=WP_004176563.1;Ontology_term=GO:0070403;gbkey=CDS;gene=cobB;go_function=NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017898959.1;locus_tag=LI478_RS15470;product=NAD-dependent protein deacylase;protein_id=WP_004176563.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3155674 3156585 . - . ID=gene-LI478_RS15475;Name=nagK;gbkey=Gene;gene=nagK;gene_biotype=protein_coding;locus_tag=LI478_RS15475 NZ_CP085478.1 Protein Homology CDS 3155674 3156585 . - 0 ID=cds-WP_004150816.1;Parent=gene-LI478_RS15475;Dbxref=Genbank:WP_004150816.1;Name=WP_004150816.1;Ontology_term=GO:0045127;gbkey=CDS;gene=nagK;go_function=N-acetylglucosamine kinase activity|0045127||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226300.1;locus_tag=LI478_RS15475;product=N-acetylglucosamine kinase;protein_id=WP_004150816.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3156634 3157878 . - . ID=gene-LI478_RS15480;Name=lolE;gbkey=Gene;gene=lolE;gene_biotype=protein_coding;locus_tag=LI478_RS15480 NZ_CP085478.1 Protein Homology CDS 3156634 3157878 . - 0 ID=cds-WP_032411986.1;Parent=gene-LI478_RS15480;Dbxref=Genbank:WP_032411986.1;Name=WP_032411986.1;Ontology_term=GO:0042953;gbkey=CDS;gene=lolE;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460189.1;locus_tag=LI478_RS15480;product=lipoprotein-releasing ABC transporter permease subunit LolE;protein_id=WP_032411986.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3157878 3158579 . - . ID=gene-LI478_RS15485;Name=lolD;gbkey=Gene;gene=lolD;gene_biotype=protein_coding;locus_tag=LI478_RS15485 NZ_CP085478.1 Protein Homology CDS 3157878 3158579 . - 0 ID=cds-WP_032414777.1;Parent=gene-LI478_RS15485;Dbxref=Genbank:WP_032414777.1;Name=WP_032414777.1;Ontology_term=GO:0042953,GO:0005524,GO:0016020;gbkey=CDS;gene=lolD;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226298.1;locus_tag=LI478_RS15485;product=lipoprotein-releasing ABC transporter ATP-binding protein LolD;protein_id=WP_032414777.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3158572 3159771 . - . ID=gene-LI478_RS15490;Name=lolC;gbkey=Gene;gene=lolC;gene_biotype=protein_coding;locus_tag=LI478_RS15490 NZ_CP085478.1 Protein Homology CDS 3158572 3159771 . - 0 ID=cds-WP_002900795.1;Parent=gene-LI478_RS15490;Dbxref=Genbank:WP_002900795.1;Name=WP_002900795.1;Ontology_term=GO:0042953,GO:0016020;gbkey=CDS;gene=lolC;go_component=membrane|0016020||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004976588.1;locus_tag=LI478_RS15490;product=lipoprotein-releasing ABC transporter permease subunit LolC;protein_id=WP_002900795.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3159905 3160036 . - . ID=gene-LI478_RS15495;Name=LI478_RS15495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15495 NZ_CP085478.1 Protein Homology CDS 3159905 3160036 . - 0 ID=cds-WP_004140630.1;Parent=gene-LI478_RS15495;Dbxref=Genbank:WP_004140630.1;Name=WP_004140630.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226296.1;locus_tag=LI478_RS15495;product=hypothetical protein;protein_id=WP_004140630.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3160076 3163522 . + . ID=gene-LI478_RS15500;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=protein_coding;locus_tag=LI478_RS15500 NZ_CP085478.1 Protein Homology CDS 3160076 3163522 . + 0 ID=cds-WP_020802685.1;Parent=gene-LI478_RS15500;Dbxref=Genbank:WP_020802685.1;Name=WP_020802685.1;Ontology_term=GO:0006281,GO:0003676,GO:0003684,GO:0005524;gbkey=CDS;gene=mfd;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226295.1;locus_tag=LI478_RS15500;product=transcription-repair coupling factor;protein_id=WP_020802685.1;transl_table=11 NZ_CP085478.1 RefSeq pseudogene 3163686 3164645 . + . ID=gene-LI478_RS15505;Name=LI478_RS15505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS15505;pseudo=true NZ_CP085478.1 Protein Homology CDS 3163686 3164645 . + 0 ID=cds-LI478_RS15505;Parent=gene-LI478_RS15505;Note=internal stop;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004183644.1;locus_tag=LI478_RS15505;product=L%2CD-transpeptidase family protein;pseudo=true;transl_table=11 NZ_CP085478.1 RefSeq gene 3164774 3165031 . - . ID=gene-LI478_RS15510;Name=bhsA;gbkey=Gene;gene=bhsA;gene_biotype=protein_coding;gene_synonym=ycfR;locus_tag=LI478_RS15510 NZ_CP085478.1 Protein Homology CDS 3164774 3165031 . - 0 ID=cds-WP_048975848.1;Parent=gene-LI478_RS15510;Dbxref=Genbank:WP_048975848.1;Name=WP_048975848.1;gbkey=CDS;gene=bhsA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226293.1;locus_tag=LI478_RS15510;product=multiple stress resistance protein BhsA;protein_id=WP_048975848.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3165129 3165284 . + . ID=gene-LI478_RS15515;Name=LI478_RS15515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15515 NZ_CP085478.1 Protein Homology CDS 3165129 3165284 . + 0 ID=cds-WP_004147941.1;Parent=gene-LI478_RS15515;Dbxref=Genbank:WP_004147941.1;Name=WP_004147941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226292.1;locus_tag=LI478_RS15515;product=hypothetical protein;protein_id=WP_004147941.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3165281 3165916 . + . ID=gene-LI478_RS15520;Name=LI478_RS15520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15520 NZ_CP085478.1 Protein Homology CDS 3165281 3165916 . + 0 ID=cds-WP_004140640.1;Parent=gene-LI478_RS15520;Dbxref=Genbank:WP_004140640.1;Name=WP_004140640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004224105.1;locus_tag=LI478_RS15520;product=TetR/AcrR family transcriptional regulator;protein_id=WP_004140640.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3165969 3166091 . - . ID=gene-LI478_RS15525;Name=LI478_RS15525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15525 NZ_CP085478.1 Protein Homology CDS 3165969 3166091 . - 0 ID=cds-WP_048975850.1;Parent=gene-LI478_RS15525;Dbxref=Genbank:WP_048975850.1;Name=WP_048975850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226290.1;locus_tag=LI478_RS15525;product=hypothetical protein;protein_id=WP_048975850.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3166160 3168349 . + . ID=gene-LI478_RS15530;Name=LI478_RS15530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15530 NZ_CP085478.1 Protein Homology CDS 3166160 3168349 . + 0 ID=cds-WP_004150817.1;Parent=gene-LI478_RS15530;Dbxref=Genbank:WP_004150817.1;Name=WP_004150817.1;Ontology_term=GO:0015891,GO:0015343,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_function=siderophore-iron transmembrane transporter activity|0015343||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226287.1;locus_tag=LI478_RS15530;product=TonB-dependent siderophore receptor;protein_id=WP_004150817.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3168407 3168946 . - . ID=gene-LI478_RS15535;Name=LI478_RS15535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15535 NZ_CP085478.1 Protein Homology CDS 3168407 3168946 . - 0 ID=cds-WP_002900781.1;Parent=gene-LI478_RS15535;Dbxref=Genbank:WP_002900781.1;Name=WP_002900781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226286.1;locus_tag=LI478_RS15535;product=glycine zipper 2TM domain-containing protein;protein_id=WP_002900781.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3169141 3170445 . - . ID=gene-LI478_RS15540;Name=LI478_RS15540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15540 NZ_CP085478.1 Protein Homology CDS 3169141 3170445 . - 0 ID=cds-WP_002900778.1;Parent=gene-LI478_RS15540;Dbxref=Genbank:WP_002900778.1;Name=WP_002900778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384716.1;locus_tag=LI478_RS15540;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_002900778.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3170691 3171233 . - . ID=gene-LI478_RS15545;Name=ycfP;gbkey=Gene;gene=ycfP;gene_biotype=protein_coding;locus_tag=LI478_RS15545 NZ_CP085478.1 Protein Homology CDS 3170691 3171233 . - 0 ID=cds-WP_004224099.1;Parent=gene-LI478_RS15545;Dbxref=Genbank:WP_004224099.1;Name=WP_004224099.1;gbkey=CDS;gene=ycfP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126033.1;locus_tag=LI478_RS15545;product=alpha/beta hydrolase YcfP;protein_id=WP_004224099.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3171269 3172279 . - . ID=gene-LI478_RS15550;Name=nagZ;gbkey=Gene;gene=nagZ;gene_biotype=protein_coding;locus_tag=LI478_RS15550 NZ_CP085478.1 Protein Homology CDS 3171269 3172279 . - 0 ID=cds-WP_004147935.1;Parent=gene-LI478_RS15550;Dbxref=Genbank:WP_004147935.1;Name=WP_004147935.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=nagZ;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226283.1;locus_tag=LI478_RS15550;product=beta-N-acetylhexosaminidase;protein_id=WP_004147935.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3172303 3173130 . - . ID=gene-LI478_RS15555;Name=thiK;gbkey=Gene;gene=thiK;gene_biotype=protein_coding;locus_tag=LI478_RS15555 NZ_CP085478.1 Protein Homology CDS 3172303 3173130 . - 0 ID=cds-WP_032414773.1;Parent=gene-LI478_RS15555;Dbxref=Genbank:WP_032414773.1;Name=WP_032414773.1;Ontology_term=GO:0006772,GO:0016310,GO:0019165;gbkey=CDS;gene=thiK;go_function=thiamine kinase activity|0019165||IEA;go_process=thiamine metabolic process|0006772||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226282.1;locus_tag=LI478_RS15555;product=thiamine kinase;protein_id=WP_032414773.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3173111 3173749 . - . ID=gene-LI478_RS15560;Name=lpoB;gbkey=Gene;gene=lpoB;gene_biotype=protein_coding;locus_tag=LI478_RS15560 NZ_CP085478.1 Protein Homology CDS 3173111 3173749 . - 0 ID=cds-WP_014342994.1;Parent=gene-LI478_RS15560;Dbxref=Genbank:WP_014342994.1;Name=WP_014342994.1;gbkey=CDS;gene=lpoB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226281.1;locus_tag=LI478_RS15560;product=penicillin-binding protein activator LpoB;protein_id=WP_014342994.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3173771 3174145 . - . ID=gene-LI478_RS15565;Name=LI478_RS15565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15565 NZ_CP085478.1 Protein Homology CDS 3173771 3174145 . - 0 ID=cds-WP_002900683.1;Parent=gene-LI478_RS15565;Dbxref=Genbank:WP_002900683.1;Name=WP_002900683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002900683.1;locus_tag=LI478_RS15565;product=YcfL family protein;protein_id=WP_002900683.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3174150 3174506 . - . ID=gene-LI478_RS15570;Name=hinT;gbkey=Gene;gene=hinT;gene_biotype=protein_coding;locus_tag=LI478_RS15570 NZ_CP085478.1 Protein Homology CDS 3174150 3174506 . - 0 ID=cds-WP_002900681.1;Parent=gene-LI478_RS15570;Dbxref=Genbank:WP_002900681.1;Name=WP_002900681.1;gbkey=CDS;gene=hinT;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226279.1;locus_tag=LI478_RS15570;product=purine nucleoside phosphoramidase;protein_id=WP_002900681.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3174768 3176201 . - . ID=gene-LI478_RS15575;Name=ptsG;gbkey=Gene;gene=ptsG;gene_biotype=protein_coding;locus_tag=LI478_RS15575 NZ_CP085478.1 Protein Homology CDS 3174768 3176201 . - 0 ID=cds-WP_002900680.1;Parent=gene-LI478_RS15575;Dbxref=Genbank:WP_002900680.1;Name=WP_002900680.1;Ontology_term=GO:0009401,GO:1904659,GO:0005355,GO:0008982;gbkey=CDS;gene=ptsG;go_function=glucose transmembrane transporter activity|0005355||IEA,protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,glucose transmembrane transport|1904659||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226278.1;locus_tag=LI478_RS15575;product=PTS glucose transporter subunit IIBC;protein_id=WP_002900680.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3176498 3177292 . - . ID=gene-LI478_RS15580;Name=LI478_RS15580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15580 NZ_CP085478.1 Protein Homology CDS 3176498 3177292 . - 0 ID=cds-WP_004140680.1;Parent=gene-LI478_RS15580;Dbxref=Genbank:WP_004140680.1;Name=WP_004140680.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226277.1;locus_tag=LI478_RS15580;product=metal-dependent hydrolase;protein_id=WP_004140680.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3177303 3178307 . - . ID=gene-LI478_RS15585;Name=holB;gbkey=Gene;gene=holB;gene_biotype=protein_coding;locus_tag=LI478_RS15585 NZ_CP085478.1 Protein Homology CDS 3177303 3178307 . - 0 ID=cds-WP_002900676.1;Parent=gene-LI478_RS15585;Dbxref=Genbank:WP_002900676.1;Name=WP_002900676.1;Ontology_term=GO:0006260,GO:0003887,GO:0008408;gbkey=CDS;gene=holB;go_function=DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226276.1;locus_tag=LI478_RS15585;product=DNA polymerase III subunit delta';protein_id=WP_002900676.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3178304 3178945 . - . ID=gene-LI478_RS15590;Name=tmk;gbkey=Gene;gene=tmk;gene_biotype=protein_coding;locus_tag=LI478_RS15590 NZ_CP085478.1 Protein Homology CDS 3178304 3178945 . - 0 ID=cds-WP_002900674.1;Parent=gene-LI478_RS15590;Dbxref=Genbank:WP_002900674.1;Name=WP_002900674.1;Ontology_term=GO:0015949,GO:0004798;gbkey=CDS;gene=tmk;go_function=thymidylate kinase activity|0004798||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226275.1;locus_tag=LI478_RS15590;product=dTMP kinase;protein_id=WP_002900674.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3178935 3179957 . - . ID=gene-LI478_RS15595;Name=yceG;gbkey=Gene;gene=yceG;gene_biotype=protein_coding;locus_tag=LI478_RS15595 NZ_CP085478.1 Protein Homology CDS 3178935 3179957 . - 0 ID=cds-WP_002900671.1;Parent=gene-LI478_RS15595;Dbxref=Genbank:WP_002900671.1;Name=WP_002900671.1;gbkey=CDS;gene=yceG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226274.1;locus_tag=LI478_RS15595;product=cell division protein YceG;protein_id=WP_002900671.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3179959 3180768 . - . ID=gene-LI478_RS15600;Name=pabC;gbkey=Gene;gene=pabC;gene_biotype=protein_coding;locus_tag=LI478_RS15600 NZ_CP085478.1 Protein Homology CDS 3179959 3180768 . - 0 ID=cds-WP_002900669.1;Parent=gene-LI478_RS15600;Dbxref=Genbank:WP_002900669.1;Name=WP_002900669.1;Ontology_term=GO:0046656,GO:0008696,GO:0030170;gbkey=CDS;gene=pabC;go_function=4-amino-4-deoxychorismate lyase activity|0008696||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=folic acid biosynthetic process|0046656||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226273.1;locus_tag=LI478_RS15600;product=aminodeoxychorismate lyase;protein_id=WP_002900669.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3180894 3182135 . - . ID=gene-LI478_RS15605;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=LI478_RS15605 NZ_CP085478.1 Protein Homology CDS 3180894 3182135 . - 0 ID=cds-WP_002900666.1;Parent=gene-LI478_RS15605;Dbxref=Genbank:WP_002900666.1;Name=WP_002900666.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabF;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309500.1;locus_tag=LI478_RS15605;product=beta-ketoacyl-ACP synthase II;protein_id=WP_002900666.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3182225 3182461 . - . ID=gene-LI478_RS15610;Name=acpP;gbkey=Gene;gene=acpP;gene_biotype=protein_coding;locus_tag=LI478_RS15610 NZ_CP085478.1 Protein Homology CDS 3182225 3182461 . - 0 ID=cds-WP_000103754.1;Parent=gene-LI478_RS15610;Dbxref=Genbank:WP_000103754.1;Name=WP_000103754.1;Ontology_term=GO:0006633;gbkey=CDS;gene=acpP;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016535861.1;locus_tag=LI478_RS15610;product=acyl carrier protein;protein_id=WP_000103754.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3182672 3183406 . - . ID=gene-LI478_RS15615;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=LI478_RS15615 NZ_CP085478.1 Protein Homology CDS 3182672 3183406 . - 0 ID=cds-WP_002899294.1;Parent=gene-LI478_RS15615;Dbxref=Genbank:WP_002899294.1;Name=WP_002899294.1;Ontology_term=GO:0006633,GO:0004316,GO:0051287;gbkey=CDS;gene=fabG;go_function=3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity|0004316||IEA,NAD binding|0051287||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129017.1;locus_tag=LI478_RS15615;product=3-oxoacyl-ACP reductase FabG;protein_id=WP_002899294.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3183419 3184348 . - . ID=gene-LI478_RS15620;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;locus_tag=LI478_RS15620 NZ_CP085478.1 Protein Homology CDS 3183419 3184348 . - 0 ID=cds-WP_064145136.1;Parent=gene-LI478_RS15620;Dbxref=Genbank:WP_064145136.1;Name=WP_064145136.1;Ontology_term=GO:0006633,GO:0004314;gbkey=CDS;gene=fabD;go_function=[acyl-carrier-protein] S-malonyltransferase activity|0004314||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226269.1;locus_tag=LI478_RS15620;product=ACP S-malonyltransferase;protein_id=WP_064145136.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3184364 3185317 . - . ID=gene-LI478_RS15625;Name=LI478_RS15625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15625 NZ_CP085478.1 Protein Homology CDS 3184364 3185317 . - 0 ID=cds-WP_002899288.1;Parent=gene-LI478_RS15625;Dbxref=Genbank:WP_002899288.1;Name=WP_002899288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129019.1;locus_tag=LI478_RS15625;product=ketoacyl-ACP synthase III;protein_id=WP_002899288.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3185371 3186468 . - . ID=gene-LI478_RS15630;Name=plsX;gbkey=Gene;gene=plsX;gene_biotype=protein_coding;locus_tag=LI478_RS15630 NZ_CP085478.1 Protein Homology CDS 3185371 3186468 . - 0 ID=cds-WP_004224085.1;Parent=gene-LI478_RS15630;Dbxref=Genbank:WP_004224085.1;Name=WP_004224085.1;Ontology_term=GO:0008610,GO:0043811;gbkey=CDS;gene=plsX;go_function=phosphate:acyl-[acyl carrier protein] acyltransferase activity|0043811||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012542244.1;locus_tag=LI478_RS15630;product=phosphate acyltransferase PlsX;protein_id=WP_004224085.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3186672 3186845 . - . ID=gene-LI478_RS15635;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=LI478_RS15635 NZ_CP085478.1 Protein Homology CDS 3186672 3186845 . - 0 ID=cds-WP_000290724.1;Parent=gene-LI478_RS15635;Dbxref=Genbank:WP_000290724.1;Name=WP_000290724.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmF;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125993.1;locus_tag=LI478_RS15635;product=50S ribosomal protein L32;protein_id=WP_000290724.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3186862 3187383 . - . ID=gene-LI478_RS15640;Name=yceD;gbkey=Gene;gene=yceD;gene_biotype=protein_coding;locus_tag=LI478_RS15640 NZ_CP085478.1 Protein Homology CDS 3186862 3187383 . - 0 ID=cds-WP_002899276.1;Parent=gene-LI478_RS15640;Dbxref=Genbank:WP_002899276.1;Name=WP_002899276.1;gbkey=CDS;gene=yceD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001174481.1;locus_tag=LI478_RS15640;product=23S rRNA accumulation protein YceD;protein_id=WP_002899276.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3187525 3188109 . + . ID=gene-LI478_RS15645;Name=LI478_RS15645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15645 NZ_CP085478.1 Protein Homology CDS 3187525 3188109 . + 0 ID=cds-WP_002899273.1;Parent=gene-LI478_RS15645;Dbxref=Genbank:WP_002899273.1;Name=WP_002899273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226264.1;locus_tag=LI478_RS15645;product=Maf family protein;protein_id=WP_002899273.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3188147 3189100 . - . ID=gene-LI478_RS15650;Name=rluC;gbkey=Gene;gene=rluC;gene_biotype=protein_coding;locus_tag=LI478_RS15650 NZ_CP085478.1 Protein Homology CDS 3188147 3189100 . - 0 ID=cds-WP_002899271.1;Parent=gene-LI478_RS15650;Dbxref=Genbank:WP_002899271.1;Name=WP_002899271.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluC;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460157.1;locus_tag=LI478_RS15650;product=23S rRNA pseudouridine(955/2504/2580) synthase RluC;protein_id=WP_002899271.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3189800 3193033 . + . ID=gene-LI478_RS15655;Name=rne;gbkey=Gene;gene=rne;gene_biotype=protein_coding;locus_tag=LI478_RS15655 NZ_CP085478.1 Protein Homology CDS 3189800 3193033 . + 0 ID=cds-WP_025368281.1;Parent=gene-LI478_RS15655;Dbxref=Genbank:WP_025368281.1;Name=WP_025368281.1;Ontology_term=GO:0006396,GO:0003723,GO:0008995;gbkey=CDS;gene=rne;go_function=RNA binding|0003723||IEA,ribonuclease E activity|0008995||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004152941.1;locus_tag=LI478_RS15655;product=ribonuclease E;protein_id=WP_025368281.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3193072 3194100 . - . ID=gene-LI478_RS15660;Name=LI478_RS15660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15660 NZ_CP085478.1 Protein Homology CDS 3193072 3194100 . - 0 ID=cds-WP_004218670.1;Parent=gene-LI478_RS15660;Dbxref=Genbank:WP_004218670.1;Name=WP_004218670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226260.1;locus_tag=LI478_RS15660;product=LysR family transcriptional regulator;protein_id=WP_004218670.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3194117 3195331 . + . ID=gene-LI478_RS15665;Name=LI478_RS15665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15665 NZ_CP085478.1 Protein Homology CDS 3194117 3195331 . + 0 ID=cds-WP_004176581.1;Parent=gene-LI478_RS15665;Dbxref=Genbank:WP_004176581.1;Name=WP_004176581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226259.1;locus_tag=LI478_RS15665;product=MFS transporter;protein_id=WP_004176581.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3195385 3196920 . - . ID=gene-LI478_RS15670;Name=murJ;gbkey=Gene;gene=murJ;gene_biotype=protein_coding;locus_tag=LI478_RS15670 NZ_CP085478.1 Protein Homology CDS 3195385 3196920 . - 0 ID=cds-WP_002899104.1;Parent=gene-LI478_RS15670;Dbxref=Genbank:WP_002899104.1;Name=WP_002899104.1;Ontology_term=GO:0009252,GO:0034204;gbkey=CDS;gene=murJ;go_process=peptidoglycan biosynthetic process|0009252||IEA,lipid translocation|0034204||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226258.1;locus_tag=LI478_RS15670;product=murein biosynthesis integral membrane protein MurJ;protein_id=WP_002899104.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3197032 3197943 . - . ID=gene-LI478_RS15675;Name=LI478_RS15675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15675 NZ_CP085478.1 Protein Homology CDS 3197032 3197943 . - 0 ID=cds-WP_004140718.1;Parent=gene-LI478_RS15675;Dbxref=Genbank:WP_004140718.1;Name=WP_004140718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226257.1;locus_tag=LI478_RS15675;product=Gfo/Idh/MocA family oxidoreductase;protein_id=WP_004140718.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3197959 3198612 . - . ID=gene-LI478_RS15680;Name=LI478_RS15680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15680 NZ_CP085478.1 Protein Homology CDS 3197959 3198612 . - 0 ID=cds-WP_032438580.1;Parent=gene-LI478_RS15680;Dbxref=Genbank:WP_032438580.1;Name=WP_032438580.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226256.1;locus_tag=LI478_RS15680;product=YceH family protein;protein_id=WP_032438580.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3198622 3199206 . - . ID=gene-LI478_RS15685;Name=rimJ;gbkey=Gene;gene=rimJ;gene_biotype=protein_coding;locus_tag=LI478_RS15685 NZ_CP085478.1 Protein Homology CDS 3198622 3199206 . - 0 ID=cds-WP_002899099.1;Parent=gene-LI478_RS15685;Dbxref=Genbank:WP_002899099.1;Name=WP_002899099.1;Ontology_term=GO:0008080;gbkey=CDS;gene=rimJ;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460138.1;locus_tag=LI478_RS15685;product=ribosomal protein S5-alanine N-acetyltransferase;protein_id=WP_002899099.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3199436 3200644 . + . ID=gene-LI478_RS15690;Name=mdtH;gbkey=Gene;gene=mdtH;gene_biotype=protein_coding;locus_tag=LI478_RS15690 NZ_CP085478.1 Protein Homology CDS 3199436 3200644 . + 0 ID=cds-WP_002899096.1;Parent=gene-LI478_RS15690;Dbxref=Genbank:WP_002899096.1;Name=WP_002899096.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=mdtH;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226254.1;locus_tag=LI478_RS15690;product=multidrug efflux MFS transporter MdtH;protein_id=WP_002899096.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3200758 3201318 . + . ID=gene-LI478_RS15695;Name=LI478_RS15695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15695 NZ_CP085478.1 Protein Homology CDS 3200758 3201318 . + 0 ID=cds-WP_004150824.1;Parent=gene-LI478_RS15695;Dbxref=Genbank:WP_004150824.1;Name=WP_004150824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226253.1;locus_tag=LI478_RS15695;product=lipoprotein;protein_id=WP_004150824.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3201444 3202490 . + . ID=gene-LI478_RS15700;Name=pyrC;gbkey=Gene;gene=pyrC;gene_biotype=protein_coding;locus_tag=LI478_RS15700 NZ_CP085478.1 Protein Homology CDS 3201444 3202490 . + 0 ID=cds-WP_004176586.1;Parent=gene-LI478_RS15700;Dbxref=Genbank:WP_004176586.1;Name=WP_004176586.1;Ontology_term=GO:0009220,GO:0004151;gbkey=CDS;gene=pyrC;go_function=dihydroorotase activity|0004151||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415580.1;locus_tag=LI478_RS15700;product=dihydroorotase;protein_id=WP_004176586.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3202563 3202814 . + . ID=gene-LI478_RS15705;Name=dinI;gbkey=Gene;gene=dinI;gene_biotype=protein_coding;locus_tag=LI478_RS15705 NZ_CP085478.1 Protein Homology CDS 3202563 3202814 . + 0 ID=cds-WP_002898994.1;Parent=gene-LI478_RS15705;Dbxref=Genbank:WP_002898994.1;Name=WP_002898994.1;gbkey=CDS;gene=dinI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226250.1;locus_tag=LI478_RS15705;product=DNA damage-inducible protein I;protein_id=WP_002898994.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3203117 3203371 . + . ID=gene-LI478_RS15710;Name=bssS;gbkey=Gene;gene=bssS;gene_biotype=protein_coding;locus_tag=LI478_RS15710 NZ_CP085478.1 Protein Homology CDS 3203117 3203371 . + 0 ID=cds-WP_002898992.1;Parent=gene-LI478_RS15710;Dbxref=Genbank:WP_002898992.1;Name=WP_002898992.1;gbkey=CDS;gene=bssS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226249.1;locus_tag=LI478_RS15710;product=biofilm formation regulator BssS;protein_id=WP_002898992.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3203497 3204615 . + . ID=gene-LI478_RS15715;Name=solA;gbkey=Gene;gene=solA;gene_biotype=protein_coding;locus_tag=LI478_RS15715 NZ_CP085478.1 Protein Homology CDS 3203497 3204615 . + 0 ID=cds-WP_002898990.1;Parent=gene-LI478_RS15715;Dbxref=Genbank:WP_002898990.1;Name=WP_002898990.1;Ontology_term=GO:0050131;gbkey=CDS;gene=solA;go_function=N-methyl-L-amino-acid oxidase activity|0050131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226248.1;locus_tag=LI478_RS15715;product=N-methyl-L-tryptophan oxidase;protein_id=WP_002898990.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3204687 3204800 . + . ID=gene-LI478_RS15720;Name=LI478_RS15720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15720 NZ_CP085478.1 Protein Homology CDS 3204687 3204800 . + 0 ID=cds-WP_002898988.1;Parent=gene-LI478_RS15720;Dbxref=Genbank:WP_002898988.1;Name=WP_002898988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226247.1;locus_tag=LI478_RS15720;product=DUF2770 family protein;protein_id=WP_002898988.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3204786 3205850 . - . ID=gene-LI478_RS15725;Name=LI478_RS15725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15725 NZ_CP085478.1 Protein Homology CDS 3204786 3205850 . - 0 ID=cds-WP_002898987.1;Parent=gene-LI478_RS15725;Dbxref=Genbank:WP_002898987.1;Name=WP_002898987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226246.1;locus_tag=LI478_RS15725;product=rhodanese-related sulfurtransferase;protein_id=WP_002898987.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3206056 3206976 . + . ID=gene-LI478_RS15730;Name=LI478_RS15730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15730 NZ_CP085478.1 Protein Homology CDS 3206056 3206976 . + 0 ID=cds-WP_004150825.1;Parent=gene-LI478_RS15730;Dbxref=Genbank:WP_004150825.1;Name=WP_004150825.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226244.1;locus_tag=LI478_RS15730;product=LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferasee;protein_id=WP_004150825.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3207148 3208374 . + . ID=gene-LI478_RS15735;Name=mdtG;gbkey=Gene;gene=mdtG;gene_biotype=protein_coding;locus_tag=LI478_RS15735 NZ_CP085478.1 Protein Homology CDS 3207148 3208374 . + 0 ID=cds-WP_004224072.1;Parent=gene-LI478_RS15735;Dbxref=Genbank:WP_004224072.1;Name=WP_004224072.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=mdtG;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226243.1;locus_tag=LI478_RS15735;product=multidrug efflux MFS transporter MdtG;protein_id=WP_004224072.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3208466 3208852 . + . ID=gene-LI478_RS15740;Name=LI478_RS15740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15740 NZ_CP085478.1 Protein Homology CDS 3208466 3208852 . + 0 ID=cds-WP_002898981.1;Parent=gene-LI478_RS15740;Dbxref=Genbank:WP_002898981.1;Name=WP_002898981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226242.1;locus_tag=LI478_RS15740;product=MysB family protein;protein_id=WP_002898981.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3208853 3209080 . - . ID=gene-LI478_RS15745;Name=LI478_RS15745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15745 NZ_CP085478.1 Protein Homology CDS 3208853 3209080 . - 0 ID=cds-WP_002898978.1;Parent=gene-LI478_RS15745;Dbxref=Genbank:WP_002898978.1;Name=WP_002898978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226241.1;locus_tag=LI478_RS15745;product=YceK/YidQ family lipoprotein;protein_id=WP_002898978.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3209147 3211675 . - . ID=gene-LI478_RS15750;Name=mdoH;gbkey=Gene;gene=mdoH;gene_biotype=protein_coding;locus_tag=LI478_RS15750 NZ_CP085478.1 Protein Homology CDS 3209147 3211675 . - 0 ID=cds-WP_002898967.1;Parent=gene-LI478_RS15750;Dbxref=Genbank:WP_002898967.1;Name=WP_002898967.1;Ontology_term=GO:0016758;gbkey=CDS;gene=mdoH;go_function=hexosyltransferase activity|0016758||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226240.1;locus_tag=LI478_RS15750;product=glucans biosynthesis glucosyltransferase MdoH;protein_id=WP_002898967.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3211668 3213221 . - . ID=gene-LI478_RS15755;Name=mdoG;gbkey=Gene;gene=mdoG;gene_biotype=protein_coding;locus_tag=LI478_RS15755 NZ_CP085478.1 Protein Homology CDS 3211668 3213221 . - 0 ID=cds-WP_004140751.1;Parent=gene-LI478_RS15755;Dbxref=Genbank:WP_004140751.1;Name=WP_004140751.1;gbkey=CDS;gene=mdoG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226239.1;locus_tag=LI478_RS15755;product=glucans biosynthesis protein MdoG;protein_id=WP_004140751.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3213473 3214633 . + . ID=gene-LI478_RS15760;Name=mdoC;gbkey=Gene;gene=mdoC;gene_biotype=protein_coding;locus_tag=LI478_RS15760 NZ_CP085478.1 Protein Homology CDS 3213473 3214633 . + 0 ID=cds-WP_002898962.1;Parent=gene-LI478_RS15760;Dbxref=Genbank:WP_002898962.1;Name=WP_002898962.1;Ontology_term=GO:0016740;gbkey=CDS;gene=mdoC;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226238.1;locus_tag=LI478_RS15760;product=glucans biosynthesis protein MdoC;protein_id=WP_002898962.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3214668 3215261 . - . ID=gene-LI478_RS15765;Name=LI478_RS15765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15765 NZ_CP085478.1 Protein Homology CDS 3214668 3215261 . - 0 ID=cds-WP_004179313.1;Parent=gene-LI478_RS15765;Dbxref=Genbank:WP_004179313.1;Name=WP_004179313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226237.1;locus_tag=LI478_RS15765;product=TetR/AcrR family transcriptional regulator;protein_id=WP_004179313.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3215328 3215855 . - . ID=gene-LI478_RS15770;Name=ymdB;gbkey=Gene;gene=ymdB;gene_biotype=protein_coding;locus_tag=LI478_RS15770 NZ_CP085478.1 Protein Homology CDS 3215328 3215855 . - 0 ID=cds-WP_004176593.1;Parent=gene-LI478_RS15770;Dbxref=Genbank:WP_004176593.1;Name=WP_004176593.1;Ontology_term=GO:0003824;gbkey=CDS;gene=ymdB;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226236.1;locus_tag=LI478_RS15770;product=O-acetyl-ADP-ribose deacetylase;protein_id=WP_004176593.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3216005 3216487 . - . ID=gene-LI478_RS15775;Name=LI478_RS15775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15775 NZ_CP085478.1 Protein Homology CDS 3216005 3216487 . - 0 ID=cds-WP_002898950.1;Parent=gene-LI478_RS15775;Dbxref=Genbank:WP_002898950.1;Name=WP_002898950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016531954.1;locus_tag=LI478_RS15775;product=DUF1097 domain-containing protein;protein_id=WP_002898950.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3216591 3217145 . - . ID=gene-LI478_RS15780;Name=LI478_RS15780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15780 NZ_CP085478.1 Protein Homology CDS 3216591 3217145 . - 0 ID=cds-WP_004140758.1;Parent=gene-LI478_RS15780;Dbxref=Genbank:WP_004140758.1;Name=WP_004140758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001001921.1;locus_tag=LI478_RS15780;product=molecular chaperone;protein_id=WP_004140758.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3217168 3217905 . - . ID=gene-LI478_RS15785;Name=LI478_RS15785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15785 NZ_CP085478.1 Protein Homology CDS 3217168 3217905 . - 0 ID=cds-WP_064153100.1;Parent=gene-LI478_RS15785;Dbxref=Genbank:WP_064153100.1;Name=WP_064153100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226233.1;locus_tag=LI478_RS15785;product=phosphatase;protein_id=WP_064153100.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3217994 3218932 . - . ID=gene-LI478_RS15790;Name=ghrA;gbkey=Gene;gene=ghrA;gene_biotype=protein_coding;locus_tag=LI478_RS15790 NZ_CP085478.1 Protein Homology CDS 3217994 3218932 . - 0 ID=cds-WP_002898938.1;Parent=gene-LI478_RS15790;Dbxref=Genbank:WP_002898938.1;Name=WP_002898938.1;Ontology_term=GO:0016618,GO:0030267,GO:0051287;gbkey=CDS;gene=ghrA;go_function=hydroxypyruvate reductase activity|0016618||IEA,glyoxylate reductase (NADP+) activity|0030267||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226232.1;locus_tag=LI478_RS15790;product=glyoxylate/hydroxypyruvate reductase GhrA;protein_id=WP_002898938.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3219201 3219288 . + . ID=gene-LI478_RS15795;Name=LI478_RS15795;gbkey=Gene;gene_biotype=tRNA;locus_tag=LI478_RS15795 NZ_CP085478.1 tRNAscan-SE tRNA 3219201 3219288 . + . ID=rna-LI478_RS15795;Parent=gene-LI478_RS15795;anticodon=(pos:3219235..3219237);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS15795;product=tRNA-Ser NZ_CP085478.1 tRNAscan-SE exon 3219201 3219288 . + . ID=exon-LI478_RS15795-1;Parent=rna-LI478_RS15795;anticodon=(pos:3219235..3219237);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS15795;product=tRNA-Ser NZ_CP085478.1 RefSeq gene 3219332 3219468 . + . ID=gene-LI478_RS15800;Name=LI478_RS15800;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LI478_RS15800 NZ_CP085478.1 cmsearch ncRNA 3219332 3219468 . + . ID=rna-LI478_RS15800;Parent=gene-LI478_RS15800;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LI478_RS15800;product=RtT sRNA NZ_CP085478.1 cmsearch exon 3219332 3219468 . + . ID=exon-LI478_RS15800-1;Parent=rna-LI478_RS15800;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LI478_RS15800;product=RtT sRNA NZ_CP085478.1 RefSeq gene 3219815 3220678 . + . ID=gene-LI478_RS15805;Name=LI478_RS15805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15805 NZ_CP085478.1 Protein Homology CDS 3219815 3220678 . + 0 ID=cds-WP_004176596.1;Parent=gene-LI478_RS15805;Dbxref=Genbank:WP_004176596.1;Name=WP_004176596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012968583.1;locus_tag=LI478_RS15805;product=arginase family protein;protein_id=WP_004176596.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3220773 3221345 . + . ID=gene-LI478_RS15810;Name=LI478_RS15810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15810 NZ_CP085478.1 Protein Homology CDS 3220773 3221345 . + 0 ID=cds-WP_032415651.1;Parent=gene-LI478_RS15810;Dbxref=Genbank:WP_032415651.1;Name=WP_032415651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004141419.1;locus_tag=LI478_RS15810;product=TetR/AcrR family transcriptional regulator;protein_id=WP_032415651.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3221535 3222440 . - . ID=gene-LI478_RS15815;Name=LI478_RS15815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15815 NZ_CP085478.1 Protein Homology CDS 3221535 3222440 . - 0 ID=cds-WP_004183627.1;Parent=gene-LI478_RS15815;Dbxref=Genbank:WP_004183627.1;Name=WP_004183627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226231.1;locus_tag=LI478_RS15815;product=LysR family transcriptional regulator;protein_id=WP_004183627.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3222555 3223415 . + . ID=gene-LI478_RS15820;Name=LI478_RS15820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15820 NZ_CP085478.1 Protein Homology CDS 3222555 3223415 . + 0 ID=cds-WP_004199757.1;Parent=gene-LI478_RS15820;Dbxref=Genbank:WP_004199757.1;Name=WP_004199757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226230.1;locus_tag=LI478_RS15820;product=pirin family protein;protein_id=WP_004199757.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3223434 3224111 . + . ID=gene-LI478_RS15825;Name=LI478_RS15825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15825 NZ_CP085478.1 Protein Homology CDS 3223434 3224111 . + 0 ID=cds-WP_002898927.1;Parent=gene-LI478_RS15825;Dbxref=Genbank:WP_002898927.1;Name=WP_002898927.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226229.1;locus_tag=LI478_RS15825;product=isochorismatase family protein;protein_id=WP_002898927.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3224257 3224344 . + . ID=gene-LI478_RS15830;Name=LI478_RS15830;gbkey=Gene;gene_biotype=tRNA;locus_tag=LI478_RS15830 NZ_CP085478.1 tRNAscan-SE tRNA 3224257 3224344 . + . ID=rna-LI478_RS15830;Parent=gene-LI478_RS15830;anticodon=(pos:3224291..3224293);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS15830;product=tRNA-Ser NZ_CP085478.1 tRNAscan-SE exon 3224257 3224344 . + . ID=exon-LI478_RS15830-1;Parent=rna-LI478_RS15830;anticodon=(pos:3224291..3224293);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS15830;product=tRNA-Ser NZ_CP085478.1 RefSeq gene 3224727 3225515 . - . ID=gene-LI478_RS15835;Name=phoH;gbkey=Gene;gene=phoH;gene_biotype=protein_coding;locus_tag=LI478_RS15835 NZ_CP085478.1 Protein Homology CDS 3224727 3225515 . - 0 ID=cds-WP_002898923.1;Parent=gene-LI478_RS15835;Dbxref=Genbank:WP_002898923.1;Name=WP_002898923.1;gbkey=CDS;gene=phoH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004871266.1;locus_tag=LI478_RS15835;product=phosphate starvation-inducible protein PhoH;protein_id=WP_002898923.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3226020 3227303 . - . ID=gene-LI478_RS15840;Name=efeB;gbkey=Gene;gene=efeB;gene_biotype=protein_coding;locus_tag=LI478_RS15840 NZ_CP085478.1 Protein Homology CDS 3226020 3227303 . - 0 ID=cds-WP_064153101.1;Parent=gene-LI478_RS15840;Dbxref=Genbank:WP_064153101.1;Name=WP_064153101.1;Ontology_term=GO:0033212,GO:0004601,GO:0020037;gbkey=CDS;gene=efeB;go_function=peroxidase activity|0004601||IEA,heme binding|0020037||IEA;go_process=iron import into cell|0033212||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226225.1;locus_tag=LI478_RS15840;product=iron uptake transporter deferrochelatase/peroxidase subunit;protein_id=WP_064153101.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3227308 3228435 . - . ID=gene-LI478_RS15845;Name=LI478_RS15845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15845 NZ_CP085478.1 Protein Homology CDS 3227308 3228435 . - 0 ID=cds-WP_020804578.1;Parent=gene-LI478_RS15845;Dbxref=Genbank:WP_020804578.1;Name=WP_020804578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226224.1;locus_tag=LI478_RS15845;product=iron uptake system protein EfeO;protein_id=WP_020804578.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3228487 3229317 . - . ID=gene-LI478_RS15850;Name=LI478_RS15850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15850 NZ_CP085478.1 Protein Homology CDS 3228487 3229317 . - 0 ID=cds-WP_002898913.1;Parent=gene-LI478_RS15850;Dbxref=Genbank:WP_002898913.1;Name=WP_002898913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226223.1;locus_tag=LI478_RS15850;product=FTR1 family protein;protein_id=WP_002898913.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3229588 3230772 . + . ID=gene-LI478_RS15855;Name=LI478_RS15855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15855 NZ_CP085478.1 Protein Homology CDS 3229588 3230772 . + 0 ID=cds-WP_002898911.1;Parent=gene-LI478_RS15855;Dbxref=Genbank:WP_002898911.1;Name=WP_002898911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016946978.1;locus_tag=LI478_RS15855;product=nucleoside transporter;protein_id=WP_002898911.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3230804 3231238 . - . ID=gene-LI478_RS15860;Name=LI478_RS15860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15860 NZ_CP085478.1 Protein Homology CDS 3230804 3231238 . - 0 ID=cds-WP_004150827.1;Parent=gene-LI478_RS15860;Dbxref=Genbank:WP_004150827.1;Name=WP_004150827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004204513.1;locus_tag=LI478_RS15860;product=DUF3574 domain-containing protein;protein_id=WP_004150827.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3231373 3232881 . - . ID=gene-LI478_RS15865;Name=putP;gbkey=Gene;gene=putP;gene_biotype=protein_coding;locus_tag=LI478_RS15865 NZ_CP085478.1 Protein Homology CDS 3231373 3232881 . - 0 ID=cds-WP_004147889.1;Parent=gene-LI478_RS15865;Dbxref=Genbank:WP_004147889.1;Name=WP_004147889.1;Ontology_term=GO:0006814,GO:0015824,GO:0055085,GO:0005298,GO:0031402,GO:0016020;gbkey=CDS;gene=putP;go_component=membrane|0016020||IEA;go_function=proline:sodium symporter activity|0005298||IEA,sodium ion binding|0031402||IEA;go_process=sodium ion transport|0006814||IEA,proline transport|0015824||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226219.1;locus_tag=LI478_RS15865;product=sodium/proline symporter PutP;protein_id=WP_004147889.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3233303 3237265 . + . ID=gene-LI478_RS15870;Name=putA;gbkey=Gene;gene=putA;gene_biotype=protein_coding;locus_tag=LI478_RS15870 NZ_CP085478.1 Protein Homology CDS 3233303 3237265 . + 0 ID=cds-WP_032414764.1;Parent=gene-LI478_RS15870;Dbxref=Genbank:WP_032414764.1;Name=WP_032414764.1;Ontology_term=GO:0006355,GO:0006561,GO:0003700,GO:0003842,GO:0004657,GO:0016620;gbkey=CDS;gene=putA;go_function=DNA-binding transcription factor activity|0003700||IEA,1-pyrroline-5-carboxylate dehydrogenase activity|0003842||IEA,proline dehydrogenase activity|0004657||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309287.1;locus_tag=LI478_RS15870;product=trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase;protein_id=WP_032414764.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3237451 3237846 . + . ID=gene-LI478_RS15875;Name=LI478_RS15875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15875 NZ_CP085478.1 Protein Homology CDS 3237451 3237846 . + 0 ID=cds-WP_002898886.1;Parent=gene-LI478_RS15875;Dbxref=Genbank:WP_002898886.1;Name=WP_002898886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226216.1;locus_tag=LI478_RS15875;product=lysozyme inhibitor LprI family protein;protein_id=WP_002898886.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3237843 3238481 . - . ID=gene-LI478_RS15880;Name=rutR;gbkey=Gene;gene=rutR;gene_biotype=protein_coding;locus_tag=LI478_RS15880 NZ_CP085478.1 Protein Homology CDS 3237843 3238481 . - 0 ID=cds-WP_002898883.1;Parent=gene-LI478_RS15880;Dbxref=Genbank:WP_002898883.1;Name=WP_002898883.1;Ontology_term=GO:0045892,GO:0003677;gbkey=CDS;gene=rutR;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226215.1;locus_tag=LI478_RS15880;product=HTH-type transcriptional regulator RutR;protein_id=WP_002898883.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3238766 3239857 . + . ID=gene-LI478_RS15885;Name=rutA;gbkey=Gene;gene=rutA;gene_biotype=protein_coding;locus_tag=LI478_RS15885 NZ_CP085478.1 Protein Homology CDS 3238766 3239857 . + 0 ID=cds-WP_004179293.1;Parent=gene-LI478_RS15885;Dbxref=Genbank:WP_004179293.1;Name=WP_004179293.1;Ontology_term=GO:0008150,GO:0010181,GO:0016491;gbkey=CDS;gene=rutA;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226214.1;locus_tag=LI478_RS15885;product=pyrimidine utilization protein A;protein_id=WP_004179293.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3239857 3240567 . + . ID=gene-LI478_RS15890;Name=rutB;gbkey=Gene;gene=rutB;gene_biotype=protein_coding;locus_tag=LI478_RS15890 NZ_CP085478.1 Protein Homology CDS 3239857 3240567 . + 0 ID=cds-WP_004224061.1;Parent=gene-LI478_RS15890;Dbxref=Genbank:WP_004224061.1;Name=WP_004224061.1;Ontology_term=GO:0016811;gbkey=CDS;gene=rutB;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in linear amides|0016811||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226213.1;locus_tag=LI478_RS15890;product=pyrimidine utilization protein B;protein_id=WP_004224061.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3240560 3240952 . + . ID=gene-LI478_RS15895;Name=rutC;gbkey=Gene;gene=rutC;gene_biotype=protein_coding;locus_tag=LI478_RS15895 NZ_CP085478.1 Protein Homology CDS 3240560 3240952 . + 0 ID=cds-WP_002898877.1;Parent=gene-LI478_RS15895;Dbxref=Genbank:WP_002898877.1;Name=WP_002898877.1;gbkey=CDS;gene=rutC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226212.1;locus_tag=LI478_RS15895;product=pyrimidine utilization protein C;protein_id=WP_002898877.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3240949 3241752 . + . ID=gene-LI478_RS15900;Name=rutD;gbkey=Gene;gene=rutD;gene_biotype=protein_coding;locus_tag=LI478_RS15900 NZ_CP085478.1 Protein Homology CDS 3240949 3241752 . + 0 ID=cds-WP_048975736.1;Parent=gene-LI478_RS15900;Dbxref=Genbank:WP_048975736.1;Name=WP_048975736.1;Ontology_term=GO:0006212,GO:0016811;gbkey=CDS;gene=rutD;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in linear amides|0016811||IEA;go_process=uracil catabolic process|0006212||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004183620.1;locus_tag=LI478_RS15900;product=pyrimidine utilization protein D;protein_id=WP_048975736.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3241749 3242339 . + . ID=gene-LI478_RS15905;Name=LI478_RS15905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15905 NZ_CP085478.1 Protein Homology CDS 3241749 3242339 . + 0 ID=cds-WP_004179287.1;Parent=gene-LI478_RS15905;Dbxref=Genbank:WP_004179287.1;Name=WP_004179287.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226209.1;locus_tag=LI478_RS15905;product=malonic semialdehyde reductase;protein_id=WP_004179287.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3242350 3242844 . + . ID=gene-LI478_RS15910;Name=rutF;gbkey=Gene;gene=rutF;gene_biotype=protein_coding;locus_tag=LI478_RS15910 NZ_CP085478.1 Protein Homology CDS 3242350 3242844 . + 0 ID=cds-WP_004176611.1;Parent=gene-LI478_RS15910;Dbxref=Genbank:WP_004176611.1;Name=WP_004176611.1;gbkey=CDS;gene=rutF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226208.1;locus_tag=LI478_RS15910;product=pyrimidine utilization flavin reductase protein F;protein_id=WP_004176611.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3242866 3244188 . + . ID=gene-LI478_RS15915;Name=rutG;gbkey=Gene;gene=rutG;gene_biotype=protein_coding;locus_tag=LI478_RS15915 NZ_CP085478.1 Protein Homology CDS 3242866 3244188 . + 0 ID=cds-WP_102007272.1;Parent=gene-LI478_RS15915;Dbxref=Genbank:WP_102007272.1;Name=WP_102007272.1;Ontology_term=GO:0006864,GO:0015218,GO:0016020;gbkey=CDS;gene=rutG;go_component=membrane|0016020||IEA;go_function=pyrimidine nucleotide transmembrane transporter activity|0015218||IEA;go_process=pyrimidine nucleotide transport|0006864||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226207.1;locus_tag=LI478_RS15915;product=pyrimidine utilization transport protein G;protein_id=WP_102007272.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3244594 3245532 . - . ID=gene-LI478_RS15920;Name=LI478_RS15920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15920 NZ_CP085478.1 Protein Homology CDS 3244594 3245532 . - 0 ID=cds-WP_004183619.1;Parent=gene-LI478_RS15920;Dbxref=Genbank:WP_004183619.1;Name=WP_004183619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004141448.1;locus_tag=LI478_RS15920;product=DMT family transporter;protein_id=WP_004183619.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3245695 3245868 . - . ID=gene-LI478_RS15925;Name=LI478_RS15925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15925 NZ_CP085478.1 Protein Homology CDS 3245695 3245868 . - 0 ID=cds-WP_002898708.1;Parent=gene-LI478_RS15925;Dbxref=Genbank:WP_002898708.1;Name=WP_002898708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003036022.1;locus_tag=LI478_RS15925;product=general stress protein;protein_id=WP_002898708.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3245956 3246087 . + . ID=gene-LI478_RS15930;Name=LI478_RS15930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15930 NZ_CP085478.1 Protein Homology CDS 3245956 3246087 . + 0 ID=cds-WP_020323707.1;Parent=gene-LI478_RS15930;Dbxref=Genbank:WP_020323707.1;Name=WP_020323707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226205.1;locus_tag=LI478_RS15930;product=hypothetical protein;protein_id=WP_020323707.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3246304 3246900 . + . ID=gene-LI478_RS15935;Name=wrbA;gbkey=Gene;gene=wrbA;gene_biotype=protein_coding;locus_tag=LI478_RS15935 NZ_CP085478.1 Protein Homology CDS 3246304 3246900 . + 0 ID=cds-WP_002898704.1;Parent=gene-LI478_RS15935;Dbxref=Genbank:WP_002898704.1;Name=WP_002898704.1;Ontology_term=GO:0003955,GO:0010181;gbkey=CDS;gene=wrbA;go_function=NAD(P)H dehydrogenase (quinone) activity|0003955||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226204.1;locus_tag=LI478_RS15935;product=NAD(P)H:quinone oxidoreductase;protein_id=WP_002898704.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3246921 3247148 . + . ID=gene-LI478_RS15940;Name=LI478_RS15940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15940 NZ_CP085478.1 Protein Homology CDS 3246921 3247148 . + 0 ID=cds-WP_002898701.1;Parent=gene-LI478_RS15940;Dbxref=Genbank:WP_002898701.1;Name=WP_002898701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002898701.1;locus_tag=LI478_RS15940;product=YccJ family protein;protein_id=WP_002898701.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3247217 3248464 . - . ID=gene-LI478_RS15945;Name=agp;gbkey=Gene;gene=agp;gene_biotype=protein_coding;locus_tag=LI478_RS15945 NZ_CP085478.1 Protein Homology CDS 3247217 3248464 . - 0 ID=cds-WP_048331718.1;Parent=gene-LI478_RS15945;Dbxref=Genbank:WP_048331718.1;Name=WP_048331718.1;gbkey=CDS;gene=agp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004191023.1;locus_tag=LI478_RS15945;product=bifunctional glucose-1-phosphatase/inositol phosphatase;protein_id=WP_048331718.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3248617 3249066 . + . ID=gene-LI478_RS15950;Name=LI478_RS15950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15950 NZ_CP085478.1 Protein Homology CDS 3248617 3249066 . + 0 ID=cds-WP_004141456.1;Parent=gene-LI478_RS15950;Dbxref=Genbank:WP_004141456.1;Name=WP_004141456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226201.1;locus_tag=LI478_RS15950;product=helix-turn-helix domain-containing protein;protein_id=WP_004141456.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3249182 3249970 . + . ID=gene-LI478_RS15955;Name=LI478_RS15955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15955 NZ_CP085478.1 Protein Homology CDS 3249182 3249970 . + 0 ID=cds-WP_004150831.1;Parent=gene-LI478_RS15955;Dbxref=Genbank:WP_004150831.1;Name=WP_004150831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226200.1;locus_tag=LI478_RS15955;product=SDR family oxidoreductase;protein_id=WP_004150831.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3249991 3250212 . - . ID=gene-LI478_RS15960;Name=LI478_RS15960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15960 NZ_CP085478.1 Protein Homology CDS 3249991 3250212 . - 0 ID=cds-WP_002898602.1;Parent=gene-LI478_RS15960;Dbxref=Genbank:WP_002898602.1;Name=WP_002898602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226199.1;locus_tag=LI478_RS15960;product=hypothetical protein;protein_id=WP_002898602.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3250469 3250591 . + . ID=gene-LI478_RS15965;Name=LI478_RS15965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15965 NZ_CP085478.1 Protein Homology CDS 3250469 3250591 . + 0 ID=cds-WP_002898600.1;Parent=gene-LI478_RS15965;Dbxref=Genbank:WP_002898600.1;Name=WP_002898600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226198.1;locus_tag=LI478_RS15965;product=small membrane protein;protein_id=WP_002898600.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3250710 3252101 . - . ID=gene-LI478_RS15970;Name=LI478_RS15970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15970 NZ_CP085478.1 Protein Homology CDS 3250710 3252101 . - 0 ID=cds-WP_004141463.1;Parent=gene-LI478_RS15970;Dbxref=Genbank:WP_004141463.1;Name=WP_004141463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226197.1;locus_tag=LI478_RS15970;product=APC family permease;protein_id=WP_004141463.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3252455 3253876 . - . ID=gene-LI478_RS15975;Name=LI478_RS15975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15975 NZ_CP085478.1 Protein Homology CDS 3252455 3253876 . - 0 ID=cds-WP_002898595.1;Parent=gene-LI478_RS15975;Dbxref=Genbank:WP_002898595.1;Name=WP_002898595.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226196.1;locus_tag=LI478_RS15975;product=glutamine synthetase family protein;protein_id=WP_002898595.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3254102 3254854 . + . ID=gene-LI478_RS15980;Name=puuD;gbkey=Gene;gene=puuD;gene_biotype=protein_coding;locus_tag=LI478_RS15980 NZ_CP085478.1 Protein Homology CDS 3254102 3254854 . + 0 ID=cds-WP_020802183.1;Parent=gene-LI478_RS15980;Dbxref=Genbank:WP_020802183.1;Name=WP_020802183.1;Ontology_term=GO:0016787;gbkey=CDS;gene=puuD;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226195.1;locus_tag=LI478_RS15980;product=gamma-glutamyl-gamma-aminobutyrate hydrolase;protein_id=WP_020802183.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3254880 3255437 . + . ID=gene-LI478_RS15985;Name=puuR;gbkey=Gene;gene=puuR;gene_biotype=protein_coding;locus_tag=LI478_RS15985 NZ_CP085478.1 Protein Homology CDS 3254880 3255437 . + 0 ID=cds-WP_002898590.1;Parent=gene-LI478_RS15985;Dbxref=Genbank:WP_002898590.1;Name=WP_002898590.1;gbkey=CDS;gene=puuR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001464354.1;locus_tag=LI478_RS15985;product=HTH-type transcriptional regulator PuuR;protein_id=WP_002898590.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3255758 3257245 . + . ID=gene-LI478_RS15990;Name=puuC;gbkey=Gene;gene=puuC;gene_biotype=protein_coding;locus_tag=LI478_RS15990 NZ_CP085478.1 Protein Homology CDS 3255758 3257245 . + 0 ID=cds-WP_048289841.1;Parent=gene-LI478_RS15990;Dbxref=Genbank:WP_048289841.1;Name=WP_048289841.1;Ontology_term=GO:0016620;gbkey=CDS;gene=puuC;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226192.1;locus_tag=LI478_RS15990;product=aldehyde dehydrogenase PuuC;protein_id=WP_048289841.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3257248 3258528 . + . ID=gene-LI478_RS15995;Name=LI478_RS15995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS15995 NZ_CP085478.1 Protein Homology CDS 3257248 3258528 . + 0 ID=cds-WP_002898585.1;Parent=gene-LI478_RS15995;Dbxref=Genbank:WP_002898585.1;Name=WP_002898585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226191.1;locus_tag=LI478_RS15995;product=FAD-binding oxidoreductase;protein_id=WP_002898585.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3258525 3259487 . - . ID=gene-LI478_RS16000;Name=LI478_RS16000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS16000 NZ_CP085478.1 Protein Homology CDS 3258525 3259487 . - 0 ID=cds-WP_004221441.1;Parent=gene-LI478_RS16000;Dbxref=Genbank:WP_004221441.1;Name=WP_004221441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226190.1;locus_tag=LI478_RS16000;product=LysR substrate-binding domain-containing protein;protein_id=WP_004221441.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3259570 3260655 . + . ID=gene-LI478_RS16005;Name=LI478_RS16005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS16005 NZ_CP085478.1 Protein Homology CDS 3259570 3260655 . + 0 ID=cds-WP_004141479.1;Parent=gene-LI478_RS16005;Dbxref=Genbank:WP_004141479.1;Name=WP_004141479.1;Ontology_term=GO:0046395,GO:0009027;gbkey=CDS;go_function=tartrate dehydrogenase activity|0009027||IEA;go_process=carboxylic acid catabolic process|0046395||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012068535.1;locus_tag=LI478_RS16005;product=tartrate dehydrogenase;protein_id=WP_004141479.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3261104 3262711 . + . ID=gene-LI478_RS16010;Name=LI478_RS16010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS16010 NZ_CP085478.1 Protein Homology CDS 3261104 3262711 . + 0 ID=cds-WP_004183615.1;Parent=gene-LI478_RS16010;Dbxref=Genbank:WP_004183615.1;Name=WP_004183615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226187.1;locus_tag=LI478_RS16010;product=BCCT family transporter;protein_id=WP_004183615.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3262748 3263872 . + . ID=gene-LI478_RS16015;Name=LI478_RS16015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS16015 NZ_CP085478.1 Protein Homology CDS 3262748 3263872 . + 0 ID=cds-WP_064153102.1;Parent=gene-LI478_RS16015;Dbxref=Genbank:WP_064153102.1;Name=WP_064153102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226186.1;locus_tag=LI478_RS16015;product=ring-hydroxylating oxygenase subunit alpha;protein_id=WP_064153102.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3263891 3265339 . + . ID=gene-LI478_RS16020;Name=LI478_RS16020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS16020 NZ_CP085478.1 Protein Homology CDS 3263891 3265339 . + 0 ID=cds-WP_048331714.1;Parent=gene-LI478_RS16020;Dbxref=Genbank:WP_048331714.1;Name=WP_048331714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226185.1;locus_tag=LI478_RS16020;product=NAD-dependent succinate-semialdehyde dehydrogenase;protein_id=WP_048331714.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3265397 3266362 . + . ID=gene-LI478_RS16025;Name=LI478_RS16025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS16025 NZ_CP085478.1 Protein Homology CDS 3265397 3266362 . + 0 ID=cds-WP_021312901.1;Parent=gene-LI478_RS16025;Dbxref=Genbank:WP_021312901.1;Name=WP_021312901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226184.1;locus_tag=LI478_RS16025;product=PDR/VanB family oxidoreductase;protein_id=WP_021312901.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3266532 3266720 . - . ID=gene-LI478_RS16030;Name=LI478_RS16030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS16030 NZ_CP085478.1 GeneMarkS-2+ CDS 3266532 3266720 . - 0 ID=cds-WP_020804576.1;Parent=gene-LI478_RS16030;Dbxref=Genbank:WP_020804576.1;Name=WP_020804576.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LI478_RS16030;product=hypothetical protein;protein_id=WP_020804576.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3266785 3267072 . + . ID=gene-LI478_RS16035;Name=LI478_RS16035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS16035 NZ_CP085478.1 Protein Homology CDS 3266785 3267072 . + 0 ID=cds-WP_004191035.1;Parent=gene-LI478_RS16035;Dbxref=Genbank:WP_004191035.1;Name=WP_004191035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226182.1;locus_tag=LI478_RS16035;product=hypothetical protein;protein_id=WP_004191035.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3267051 3267671 . + . ID=gene-LI478_RS16040;Name=LI478_RS16040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS16040 NZ_CP085478.1 Protein Homology CDS 3267051 3267671 . + 0 ID=cds-WP_002898466.1;Parent=gene-LI478_RS16040;Dbxref=Genbank:WP_002898466.1;Name=WP_002898466.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012772.2;locus_tag=LI478_RS16040;product=cyclic diguanylate phosphodiesterase;protein_id=WP_002898466.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3267821 3267908 . - . ID=gene-LI478_RS16045;Name=LI478_RS16045;gbkey=Gene;gene_biotype=tRNA;locus_tag=LI478_RS16045 NZ_CP085478.1 tRNAscan-SE tRNA 3267821 3267908 . - . ID=rna-LI478_RS16045;Parent=gene-LI478_RS16045;anticodon=(pos:complement(3267872..3267874));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS16045;product=tRNA-Ser NZ_CP085478.1 tRNAscan-SE exon 3267821 3267908 . - . ID=exon-LI478_RS16045-1;Parent=rna-LI478_RS16045;anticodon=(pos:complement(3267872..3267874));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS16045;product=tRNA-Ser NZ_CP085478.1 RefSeq gene 3268028 3269680 . - . ID=gene-LI478_RS16050;Name=LI478_RS16050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS16050 NZ_CP085478.1 Protein Homology CDS 3268028 3269680 . - 0 ID=cds-WP_032414751.1;Parent=gene-LI478_RS16050;Dbxref=Genbank:WP_032414751.1;Name=WP_032414751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019705932.1;locus_tag=LI478_RS16050;product=ABC transporter substrate-binding protein;protein_id=WP_032414751.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3269950 3270609 . + . ID=gene-LI478_RS16055;Name=yccA;gbkey=Gene;gene=yccA;gene_biotype=protein_coding;locus_tag=LI478_RS16055 NZ_CP085478.1 Protein Homology CDS 3269950 3270609 . + 0 ID=cds-WP_002898458.1;Parent=gene-LI478_RS16055;Dbxref=Genbank:WP_002898458.1;Name=WP_002898458.1;gbkey=CDS;gene=yccA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000375124.1;locus_tag=LI478_RS16055;product=FtsH protease modulator YccA;protein_id=WP_002898458.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3270698 3271027 . + . ID=gene-LI478_RS16060;Name=tusE;gbkey=Gene;gene=tusE;gene_biotype=protein_coding;locus_tag=LI478_RS16060 NZ_CP085478.1 Protein Homology CDS 3270698 3271027 . + 0 ID=cds-WP_002898457.1;Parent=gene-LI478_RS16060;Dbxref=Genbank:WP_002898457.1;Name=WP_002898457.1;gbkey=CDS;gene=tusE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226178.1;locus_tag=LI478_RS16060;product=sulfurtransferase TusE;protein_id=WP_002898457.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3271024 3271305 . - . ID=gene-LI478_RS16065;Name=yccX;gbkey=Gene;gene=yccX;gene_biotype=protein_coding;locus_tag=LI478_RS16065 NZ_CP085478.1 Protein Homology CDS 3271024 3271305 . - 0 ID=cds-WP_004150835.1;Parent=gene-LI478_RS16065;Dbxref=Genbank:WP_004150835.1;Name=WP_004150835.1;Ontology_term=GO:0003998;gbkey=CDS;gene=yccX;go_function=acylphosphatase activity|0003998||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226177.1;locus_tag=LI478_RS16065;product=acylphosphatase;protein_id=WP_004150835.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3271354 3272142 . - . ID=gene-LI478_RS16070;Name=LI478_RS16070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS16070 NZ_CP085478.1 Protein Homology CDS 3271354 3272142 . - 0 ID=cds-WP_004183586.1;Parent=gene-LI478_RS16070;Dbxref=Genbank:WP_004183586.1;Name=WP_004183586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226176.1;locus_tag=LI478_RS16070;product=AraC family transcriptional regulator;protein_id=WP_004183586.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3272160 3272714 . - . ID=gene-LI478_RS16075;Name=LI478_RS16075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS16075 NZ_CP085478.1 Protein Homology CDS 3272160 3272714 . - 0 ID=cds-WP_064153103.1;Parent=gene-LI478_RS16075;Dbxref=Genbank:WP_064153103.1;Name=WP_064153103.1;Ontology_term=GO:0008150,GO:0003674,GO:0005575;gbkey=CDS;go_component=cellular_component|0005575||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226175.1;locus_tag=LI478_RS16075;product=YbhB/YbcL family Raf kinase inhibitor-like protein;protein_id=WP_064153103.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3272905 3274107 . + . ID=gene-LI478_RS16080;Name=rlmI;gbkey=Gene;gene=rlmI;gene_biotype=protein_coding;locus_tag=LI478_RS16080 NZ_CP085478.1 Protein Homology CDS 3272905 3274107 . + 0 ID=cds-WP_004176645.1;Parent=gene-LI478_RS16080;Dbxref=Genbank:WP_004176645.1;Name=WP_004176645.1;Ontology_term=GO:0003723,GO:0008649;gbkey=CDS;gene=rlmI;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460054.1;locus_tag=LI478_RS16080;product=23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI;protein_id=WP_004176645.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3274167 3274484 . + . ID=gene-LI478_RS16085;Name=hspQ;gbkey=Gene;gene=hspQ;gene_biotype=protein_coding;locus_tag=LI478_RS16085 NZ_CP085478.1 Protein Homology CDS 3274167 3274484 . + 0 ID=cds-WP_002898441.1;Parent=gene-LI478_RS16085;Dbxref=Genbank:WP_002898441.1;Name=WP_002898441.1;gbkey=CDS;gene=hspQ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226173.1;locus_tag=LI478_RS16085;product=heat shock protein HspQ;protein_id=WP_002898441.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3274514 3274927 . - . ID=gene-LI478_RS16090;Name=LI478_RS16090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS16090 NZ_CP085478.1 Protein Homology CDS 3274514 3274927 . - 0 ID=cds-WP_004144085.1;Parent=gene-LI478_RS16090;Dbxref=Genbank:WP_004144085.1;Name=WP_004144085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226172.1;locus_tag=LI478_RS16090;product=CoA-binding protein;protein_id=WP_004144085.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3275082 3275540 . + . ID=gene-LI478_RS16095;Name=mgsA;gbkey=Gene;gene=mgsA;gene_biotype=protein_coding;locus_tag=LI478_RS16095 NZ_CP085478.1 Protein Homology CDS 3275082 3275540 . + 0 ID=cds-WP_004224034.1;Parent=gene-LI478_RS16095;Dbxref=Genbank:WP_004224034.1;Name=WP_004224034.1;Ontology_term=GO:0006007,GO:0019242,GO:0008929;gbkey=CDS;gene=mgsA;go_function=methylglyoxal synthase activity|0008929||IEA;go_process=glucose catabolic process|0006007||IEA,methylglyoxal biosynthetic process|0019242||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415483.2;locus_tag=LI478_RS16095;product=methylglyoxal synthase;protein_id=WP_004224034.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3275552 3277606 . - . ID=gene-LI478_RS16100;Name=helD;gbkey=Gene;gene=helD;gene_biotype=protein_coding;locus_tag=LI478_RS16100 NZ_CP085478.1 Protein Homology CDS 3275552 3277606 . - 0 ID=cds-WP_032103554.1;Parent=gene-LI478_RS16100;Dbxref=Genbank:WP_032103554.1;Name=WP_032103554.1;Ontology_term=GO:0003677,GO:0003678,GO:0005524;gbkey=CDS;gene=helD;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226170.1;locus_tag=LI478_RS16100;product=DNA helicase IV;protein_id=WP_032103554.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3277731 3278177 . + . ID=gene-LI478_RS16105;Name=LI478_RS16105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS16105 NZ_CP085478.1 Protein Homology CDS 3277731 3278177 . + 0 ID=cds-WP_002898425.1;Parent=gene-LI478_RS16105;Dbxref=Genbank:WP_002898425.1;Name=WP_002898425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309072.1;locus_tag=LI478_RS16105;product=YccF domain-containing protein;protein_id=WP_002898425.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3278195 3280330 . + . ID=gene-LI478_RS16110;Name=yccS;gbkey=Gene;gene=yccS;gene_biotype=protein_coding;locus_tag=LI478_RS16110 NZ_CP085478.1 Protein Homology CDS 3278195 3280330 . + 0 ID=cds-WP_002898422.1;Parent=gene-LI478_RS16110;Dbxref=Genbank:WP_002898422.1;Name=WP_002898422.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yccS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226168.1;locus_tag=LI478_RS16110;product=YccS family putative transporter;protein_id=WP_002898422.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3280344 3280940 . - . ID=gene-LI478_RS16115;Name=LI478_RS16115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS16115 NZ_CP085478.1 Protein Homology CDS 3280344 3280940 . - 0 ID=cds-WP_102007271.1;Parent=gene-LI478_RS16115;Dbxref=Genbank:WP_102007271.1;Name=WP_102007271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226167.1;locus_tag=LI478_RS16115;product=TfoX/Sxy family DNA transformation protein;protein_id=WP_102007271.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3281289 3281798 . + . ID=gene-LI478_RS16120;Name=sulA;gbkey=Gene;gene=sulA;gene_biotype=protein_coding;locus_tag=LI478_RS16120 NZ_CP085478.1 Protein Homology CDS 3281289 3281798 . + 0 ID=cds-WP_002898418.1;Parent=gene-LI478_RS16120;Dbxref=Genbank:WP_002898418.1;Name=WP_002898418.1;gbkey=CDS;gene=sulA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226166.1;locus_tag=LI478_RS16120;product=cell division inhibitor SulA;protein_id=WP_002898418.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3282151 3283221 . + . ID=gene-LI478_RS16125;Name=ompA;gbkey=Gene;gene=ompA;gene_biotype=protein_coding;locus_tag=LI478_RS16125 NZ_CP085478.1 Protein Homology CDS 3282151 3283221 . + 0 ID=cds-WP_002898408.1;Parent=gene-LI478_RS16125;Dbxref=Genbank:WP_002898408.1;Name=WP_002898408.1;gbkey=CDS;gene=ompA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309068.1;locus_tag=LI478_RS16125;product=porin OmpA;protein_id=WP_002898408.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3283353 3283805 . - . ID=gene-LI478_RS16130;Name=matP;gbkey=Gene;gene=matP;gene_biotype=protein_coding;locus_tag=LI478_RS16130 NZ_CP085478.1 Protein Homology CDS 3283353 3283805 . - 0 ID=cds-WP_002898404.1;Parent=gene-LI478_RS16130;Dbxref=Genbank:WP_002898404.1;Name=WP_002898404.1;Ontology_term=GO:0006355,GO:0043565;gbkey=CDS;gene=matP;go_function=sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226164.1;locus_tag=LI478_RS16130;product=macrodomain Ter protein MatP;protein_id=WP_002898404.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3283991 3285748 . + . ID=gene-LI478_RS16135;Name=LI478_RS16135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS16135 NZ_CP085478.1 Protein Homology CDS 3283991 3285748 . + 0 ID=cds-WP_032414743.1;Parent=gene-LI478_RS16135;Dbxref=Genbank:WP_032414743.1;Name=WP_032414743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226163.1;locus_tag=LI478_RS16135;product=Lon protease family protein;protein_id=WP_032414743.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3285818 3286336 . + . ID=gene-LI478_RS16140;Name=fabA;gbkey=Gene;gene=fabA;gene_biotype=protein_coding;locus_tag=LI478_RS16140 NZ_CP085478.1 Protein Homology CDS 3285818 3286336 . + 0 ID=cds-WP_002898398.1;Parent=gene-LI478_RS16140;Dbxref=Genbank:WP_002898398.1;Name=WP_002898398.1;Ontology_term=GO:0006633,GO:0008693;gbkey=CDS;gene=fabA;go_function=3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity|0008693||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014915875.1;locus_tag=LI478_RS16140;product=bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase;protein_id=WP_002898398.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3286405 3286572 . - . ID=gene-LI478_RS16145;Name=rmf;gbkey=Gene;gene=rmf;gene_biotype=protein_coding;locus_tag=LI478_RS16145 NZ_CP085478.1 Protein Homology CDS 3286405 3286572 . - 0 ID=cds-WP_002898396.1;Parent=gene-LI478_RS16145;Dbxref=Genbank:WP_002898396.1;Name=WP_002898396.1;gbkey=CDS;gene=rmf;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309064.1;locus_tag=LI478_RS16145;product=ribosome modulation factor;protein_id=WP_002898396.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3286827 3287390 . - . ID=gene-LI478_RS16150;Name=pqiC;gbkey=Gene;gene=pqiC;gene_biotype=protein_coding;locus_tag=LI478_RS16150 NZ_CP085478.1 Protein Homology CDS 3286827 3287390 . - 0 ID=cds-WP_002898392.1;Parent=gene-LI478_RS16150;Dbxref=Genbank:WP_002898392.1;Name=WP_002898392.1;gbkey=CDS;gene=pqiC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226161.1;locus_tag=LI478_RS16150;product=membrane integrity-associated transporter subunit PqiC;protein_id=WP_002898392.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3287390 3289027 . - . ID=gene-LI478_RS16155;Name=pqiB;gbkey=Gene;gene=pqiB;gene_biotype=protein_coding;locus_tag=LI478_RS16155 NZ_CP085478.1 Protein Homology CDS 3287390 3289027 . - 0 ID=cds-WP_002898390.1;Parent=gene-LI478_RS16155;Dbxref=Genbank:WP_002898390.1;Name=WP_002898390.1;gbkey=CDS;gene=pqiB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226160.1;locus_tag=LI478_RS16155;product=intermembrane transport protein PqiB;protein_id=WP_002898390.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3289017 3290285 . - . ID=gene-LI478_RS16160;Name=pqiA;gbkey=Gene;gene=pqiA;gene_biotype=protein_coding;locus_tag=LI478_RS16160 NZ_CP085478.1 Protein Homology CDS 3289017 3290285 . - 0 ID=cds-WP_002898387.1;Parent=gene-LI478_RS16160;Dbxref=Genbank:WP_002898387.1;Name=WP_002898387.1;gbkey=CDS;gene=pqiA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004183570.1;locus_tag=LI478_RS16160;product=membrane integrity-associated transporter subunit PqiA;protein_id=WP_002898387.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3290300 3292207 . - . ID=gene-LI478_RS16165;Name=LI478_RS16165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS16165 NZ_CP085478.1 Protein Homology CDS 3290300 3292207 . - 0 ID=cds-WP_004147848.1;Parent=gene-LI478_RS16165;Dbxref=Genbank:WP_004147848.1;Name=WP_004147848.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000053132.1;locus_tag=LI478_RS16165;product=ABC transporter ATP-binding protein;protein_id=WP_004147848.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3292220 3294325 . - . ID=gene-LI478_RS16170;Name=rlmKL;gbkey=Gene;gene=rlmKL;gene_biotype=protein_coding;locus_tag=LI478_RS16170 NZ_CP085478.1 Protein Homology CDS 3292220 3294325 . - 0 ID=cds-WP_004147847.1;Parent=gene-LI478_RS16170;Dbxref=Genbank:WP_004147847.1;Name=WP_004147847.1;Ontology_term=GO:0031167,GO:0003723,GO:0008990;gbkey=CDS;gene=rlmKL;go_function=RNA binding|0003723||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226157.1;locus_tag=LI478_RS16170;product=bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL;protein_id=WP_004147847.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3294425 3295534 . + . ID=gene-LI478_RS16175;Name=LI478_RS16175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS16175 NZ_CP085478.1 Protein Homology CDS 3294425 3295534 . + 0 ID=cds-WP_002898310.1;Parent=gene-LI478_RS16175;Dbxref=Genbank:WP_002898310.1;Name=WP_002898310.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226156.1;locus_tag=LI478_RS16175;product=MOSC domain-containing protein;protein_id=WP_002898310.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3295531 3296073 . - . ID=gene-LI478_RS16180;Name=zapC;gbkey=Gene;gene=zapC;gene_biotype=protein_coding;locus_tag=LI478_RS16180 NZ_CP085478.1 Protein Homology CDS 3295531 3296073 . - 0 ID=cds-WP_002898308.1;Parent=gene-LI478_RS16180;Dbxref=Genbank:WP_002898308.1;Name=WP_002898308.1;gbkey=CDS;gene=zapC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226155.1;locus_tag=LI478_RS16180;product=cell division protein ZapC;protein_id=WP_002898308.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3296244 3297254 . - . ID=gene-LI478_RS16185;Name=pyrD;gbkey=Gene;gene=pyrD;gene_biotype=protein_coding;locus_tag=LI478_RS16185 NZ_CP085478.1 Protein Homology CDS 3296244 3297254 . - 0 ID=cds-WP_002898303.1;Parent=gene-LI478_RS16185;Dbxref=Genbank:WP_002898303.1;Name=WP_002898303.1;Ontology_term=GO:0006222,GO:0004152,GO:0016020;gbkey=CDS;gene=pyrD;go_component=membrane|0016020||IEA;go_function=dihydroorotate dehydrogenase activity|0004152||IEA;go_process=UMP biosynthetic process|0006222||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226154.1;locus_tag=LI478_RS16185;product=quinone-dependent dihydroorotate dehydrogenase;protein_id=WP_002898303.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3297504 3298079 . + . ID=gene-LI478_RS16190;Name=ssuE;gbkey=Gene;gene=ssuE;gene_biotype=protein_coding;locus_tag=LI478_RS16190 NZ_CP085478.1 Protein Homology CDS 3297504 3298079 . + 0 ID=cds-WP_002898296.1;Parent=gene-LI478_RS16190;Dbxref=Genbank:WP_002898296.1;Name=WP_002898296.1;Ontology_term=GO:0046306,GO:0008752;gbkey=CDS;gene=ssuE;go_function=FMN reductase activity|0008752||IEA;go_process=alkanesulfonate catabolic process|0046306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226153.1;locus_tag=LI478_RS16190;product=NADPH-dependent FMN reductase;protein_id=WP_002898296.1;transl_table=11 NZ_CP085478.1 RefSeq pseudogene 3298072 3299071 . + . ID=gene-LI478_RS16195;Name=LI478_RS16195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS16195;pseudo=true NZ_CP085478.1 Protein Homology CDS 3298072 3299071 . + 0 ID=cds-LI478_RS16195;Parent=gene-LI478_RS16195;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226152.1;locus_tag=LI478_RS16195;product=sulfonate ABC transporter substrate-binding protein;pseudo=true;transl_table=11 NZ_CP085478.1 RefSeq gene 3299031 3300176 . + . ID=gene-LI478_RS16200;Name=ssuD;gbkey=Gene;gene=ssuD;gene_biotype=protein_coding;locus_tag=LI478_RS16200 NZ_CP085478.1 Protein Homology CDS 3299031 3300176 . + 0 ID=cds-WP_002898293.1;Parent=gene-LI478_RS16200;Dbxref=Genbank:WP_002898293.1;Name=WP_002898293.1;Ontology_term=GO:0006790,GO:0008726,GO:0010181;gbkey=CDS;gene=ssuD;go_function=alkanesulfonate monooxygenase activity|0008726||IEA,FMN binding|0010181||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415455.1;locus_tag=LI478_RS16200;product=FMNH2-dependent alkanesulfonate monooxygenase;protein_id=WP_002898293.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3300187 3300978 . + . ID=gene-LI478_RS16205;Name=ssuC;gbkey=Gene;gene=ssuC;gene_biotype=protein_coding;locus_tag=LI478_RS16205 NZ_CP085478.1 Protein Homology CDS 3300187 3300978 . + 0 ID=cds-WP_004141755.1;Parent=gene-LI478_RS16205;Dbxref=Genbank:WP_004141755.1;Name=WP_004141755.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=ssuC;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226150.1;locus_tag=LI478_RS16205;product=aliphatic sulfonate ABC transporter permease SsuC;protein_id=WP_004141755.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3300975 3301748 . + . ID=gene-LI478_RS16210;Name=ssuB;gbkey=Gene;gene=ssuB;gene_biotype=protein_coding;locus_tag=LI478_RS16210 NZ_CP085478.1 Protein Homology CDS 3300975 3301748 . + 0 ID=cds-WP_032414736.1;Parent=gene-LI478_RS16210;Dbxref=Genbank:WP_032414736.1;Name=WP_032414736.1;Ontology_term=GO:0005524;gbkey=CDS;gene=ssuB;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226149.1;locus_tag=LI478_RS16210;product=aliphatic sulfonates ABC transporter ATP-binding protein;protein_id=WP_032414736.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3301953 3304568 . - . ID=gene-LI478_RS16215;Name=pepN;gbkey=Gene;gene=pepN;gene_biotype=protein_coding;locus_tag=LI478_RS16215 NZ_CP085478.1 Protein Homology CDS 3301953 3304568 . - 0 ID=cds-WP_002898220.1;Parent=gene-LI478_RS16215;Dbxref=Genbank:WP_002898220.1;Name=WP_002898220.1;Ontology_term=GO:0006508,GO:0004177,GO:0008237;gbkey=CDS;gene=pepN;go_function=aminopeptidase activity|0004177||IEA,metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000193787.1;locus_tag=LI478_RS16215;product=aminopeptidase N;protein_id=WP_002898220.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3304895 3306097 . + . ID=gene-LI478_RS16220;Name=pncB;gbkey=Gene;gene=pncB;gene_biotype=protein_coding;locus_tag=LI478_RS16220 NZ_CP085478.1 Protein Homology CDS 3304895 3306097 . + 0 ID=cds-WP_002898217.1;Parent=gene-LI478_RS16220;Dbxref=Genbank:WP_002898217.1;Name=WP_002898217.1;Ontology_term=GO:0019358,GO:0004516;gbkey=CDS;gene=pncB;go_function=nicotinate phosphoribosyltransferase activity|0004516||IEA;go_process=nicotinate nucleotide salvage|0019358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226146.1;locus_tag=LI478_RS16220;product=nicotinate phosphoribosyltransferase;protein_id=WP_002898217.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3306140 3307306 . - . ID=gene-LI478_RS16225;Name=LI478_RS16225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS16225 NZ_CP085478.1 Protein Homology CDS 3306140 3307306 . - 0 ID=cds-WP_004179190.1;Parent=gene-LI478_RS16225;Dbxref=Genbank:WP_004179190.1;Name=WP_004179190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226145.1;locus_tag=LI478_RS16225;product=M20 family metallopeptidase;protein_id=WP_004179190.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3307325 3308563 . - . ID=gene-LI478_RS16230;Name=LI478_RS16230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS16230 NZ_CP085478.1 Protein Homology CDS 3307325 3308563 . - 0 ID=cds-WP_004141764.1;Parent=gene-LI478_RS16230;Dbxref=Genbank:WP_004141764.1;Name=WP_004141764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226144.1;locus_tag=LI478_RS16230;product=Zn-dependent hydrolase;protein_id=WP_004141764.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3308588 3309877 . - . ID=gene-LI478_RS16235;Name=LI478_RS16235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS16235 NZ_CP085478.1 Protein Homology CDS 3308588 3309877 . - 0 ID=cds-WP_032414732.1;Parent=gene-LI478_RS16235;Dbxref=Genbank:WP_032414732.1;Name=WP_032414732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226143.1;locus_tag=LI478_RS16235;product=septum formation initiator;protein_id=WP_032414732.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3310000 3311151 . - . ID=gene-LI478_RS16240;Name=dpaL;gbkey=Gene;gene=dpaL;gene_biotype=protein_coding;locus_tag=LI478_RS16240 NZ_CP085478.1 Protein Homology CDS 3310000 3311151 . - 0 ID=cds-WP_032414731.1;Parent=gene-LI478_RS16240;Dbxref=Genbank:WP_032414731.1;Name=WP_032414731.1;Ontology_term=GO:0008838,GO:0030170;gbkey=CDS;gene=dpaL;go_function=diaminopropionate ammonia-lyase activity|0008838||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226142.1;locus_tag=LI478_RS16240;product=diaminopropionate ammonia-lyase;protein_id=WP_032414731.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3311523 3311984 . + . ID=gene-LI478_RS16245;Name=LI478_RS16245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS16245 NZ_CP085478.1 Protein Homology CDS 3311523 3311984 . + 0 ID=cds-WP_002898209.1;Parent=gene-LI478_RS16245;Dbxref=Genbank:WP_002898209.1;Name=WP_002898209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459976.1;locus_tag=LI478_RS16245;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_002898209.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3312160 3313560 . + . ID=gene-LI478_RS16250;Name=asnS;gbkey=Gene;gene=asnS;gene_biotype=protein_coding;locus_tag=LI478_RS16250 NZ_CP085478.1 Protein Homology CDS 3312160 3313560 . + 0 ID=cds-WP_002898206.1;Parent=gene-LI478_RS16250;Dbxref=Genbank:WP_002898206.1;Name=WP_002898206.1;Ontology_term=GO:0006421,GO:0004816,GO:0005524;gbkey=CDS;gene=asnS;go_function=asparagine-tRNA ligase activity|0004816||IEA,ATP binding|0005524||IEA;go_process=asparaginyl-tRNA aminoacylation|0006421||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123540.1;locus_tag=LI478_RS16250;product=asparagine--tRNA ligase;protein_id=WP_002898206.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3314155 3315231 . + . ID=gene-LI478_RS16255;Name=ompK35;gbkey=Gene;gene=ompK35;gene_biotype=protein_coding;locus_tag=LI478_RS16255 NZ_CP085478.1 Protein Homology CDS 3314155 3315231 . + 0 ID=cds-WP_072269332.1;Parent=gene-LI478_RS16255;Dbxref=Genbank:WP_072269332.1;Name=WP_072269332.1;gbkey=CDS;gene=ompK35;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001080666.1;locus_tag=LI478_RS16255;product=porin OmpK35;protein_id=WP_072269332.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3315419 3316609 . + . ID=gene-LI478_RS16260;Name=LI478_RS16260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS16260 NZ_CP085478.1 Protein Homology CDS 3315419 3316609 . + 0 ID=cds-WP_002898202.1;Parent=gene-LI478_RS16260;Dbxref=Genbank:WP_002898202.1;Name=WP_002898202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009653304.1;locus_tag=LI478_RS16260;product=aspartate/tyrosine/aromatic aminotransferase;protein_id=WP_002898202.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3316678 3317325 . - . ID=gene-LI478_RS16265;Name=LI478_RS16265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS16265 NZ_CP085478.1 Protein Homology CDS 3316678 3317325 . - 0 ID=cds-WP_002898200.1;Parent=gene-LI478_RS16265;Dbxref=Genbank:WP_002898200.1;Name=WP_002898200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226135.1;locus_tag=LI478_RS16265;product=MBL fold metallo-hydrolase;protein_id=WP_002898200.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3317339 3317890 . - . ID=gene-LI478_RS16270;Name=LI478_RS16270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS16270 NZ_CP085478.1 Protein Homology CDS 3317339 3317890 . - 0 ID=cds-WP_002898198.1;Parent=gene-LI478_RS16270;Dbxref=Genbank:WP_002898198.1;Name=WP_002898198.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309036.1;locus_tag=LI478_RS16270;product=YcbK family protein;protein_id=WP_002898198.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3318193 3319983 . - . ID=gene-LI478_RS16275;Name=ldtD;gbkey=Gene;gene=ldtD;gene_biotype=protein_coding;locus_tag=LI478_RS16275 NZ_CP085478.1 Protein Homology CDS 3318193 3319983 . - 0 ID=cds-WP_032438596.1;Parent=gene-LI478_RS16275;Dbxref=Genbank:WP_032438596.1;Name=WP_032438596.1;Ontology_term=GO:0016740;gbkey=CDS;gene=ldtD;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226133.1;locus_tag=LI478_RS16275;product=L%2CD-transpeptidase;protein_id=WP_032438596.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3320184 3324632 . - . ID=gene-LI478_RS16280;Name=mukB;gbkey=Gene;gene=mukB;gene_biotype=protein_coding;locus_tag=LI478_RS16280 NZ_CP085478.1 Protein Homology CDS 3320184 3324632 . - 0 ID=cds-WP_032414730.1;Parent=gene-LI478_RS16280;Dbxref=Genbank:WP_032414730.1;Name=WP_032414730.1;Ontology_term=GO:0007059,GO:0030261,GO:0003677;gbkey=CDS;gene=mukB;go_function=DNA binding|0003677||IEA;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226132.1;locus_tag=LI478_RS16280;product=chromosome partition protein MukB;protein_id=WP_032414730.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3324632 3325336 . - . ID=gene-LI478_RS16285;Name=mukE;gbkey=Gene;gene=mukE;gene_biotype=protein_coding;locus_tag=LI478_RS16285 NZ_CP085478.1 Protein Homology CDS 3324632 3325336 . - 0 ID=cds-WP_004150840.1;Parent=gene-LI478_RS16285;Dbxref=Genbank:WP_004150840.1;Name=WP_004150840.1;Ontology_term=GO:0007059,GO:0030261;gbkey=CDS;gene=mukE;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226131.1;locus_tag=LI478_RS16285;product=chromosome partition protein MukE;protein_id=WP_004150840.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3325317 3326639 . - . ID=gene-LI478_RS16290;Name=mukF;gbkey=Gene;gene=mukF;gene_biotype=protein_coding;locus_tag=LI478_RS16290 NZ_CP085478.1 Protein Homology CDS 3325317 3326639 . - 0 ID=cds-WP_002898189.1;Parent=gene-LI478_RS16290;Dbxref=Genbank:WP_002898189.1;Name=WP_002898189.1;Ontology_term=GO:0007059,GO:0005509;gbkey=CDS;gene=mukF;go_function=calcium ion binding|0005509||IEA;go_process=chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123549.1;locus_tag=LI478_RS16290;product=chromosome partition protein MukF;protein_id=WP_002898189.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3326636 3327436 . - . ID=gene-LI478_RS16295;Name=cmoM;gbkey=Gene;gene=cmoM;gene_biotype=protein_coding;locus_tag=LI478_RS16295 NZ_CP085478.1 Protein Homology CDS 3326636 3327436 . - 0 ID=cds-WP_002898187.1;Parent=gene-LI478_RS16295;Dbxref=Genbank:WP_002898187.1;Name=WP_002898187.1;gbkey=CDS;gene=cmoM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226128.1;locus_tag=LI478_RS16295;product=tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM;protein_id=WP_002898187.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3327558 3328337 . + . ID=gene-LI478_RS16300;Name=elyC;gbkey=Gene;gene=elyC;gene_biotype=protein_coding;locus_tag=LI478_RS16300 NZ_CP085478.1 Protein Homology CDS 3327558 3328337 . + 0 ID=cds-WP_004141786.1;Parent=gene-LI478_RS16300;Dbxref=Genbank:WP_004141786.1;Name=WP_004141786.1;gbkey=CDS;gene=elyC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226127.1;locus_tag=LI478_RS16300;product=envelope biogenesis factor ElyC;protein_id=WP_004141786.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3328314 3329207 . - . ID=gene-LI478_RS16305;Name=LI478_RS16305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS16305 NZ_CP085478.1 Protein Homology CDS 3328314 3329207 . - 0 ID=cds-WP_002898182.1;Parent=gene-LI478_RS16305;Dbxref=Genbank:WP_002898182.1;Name=WP_002898182.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226126.1;locus_tag=LI478_RS16305;product=YcbJ family phosphotransferase;protein_id=WP_002898182.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3329345 3330091 . - . ID=gene-LI478_RS16310;Name=kdsB;gbkey=Gene;gene=kdsB;gene_biotype=protein_coding;locus_tag=LI478_RS16310 NZ_CP085478.1 Protein Homology CDS 3329345 3330091 . - 0 ID=cds-WP_002898180.1;Parent=gene-LI478_RS16310;Dbxref=Genbank:WP_002898180.1;Name=WP_002898180.1;Ontology_term=GO:0009244,GO:0008690;gbkey=CDS;gene=kdsB;go_function=3-deoxy-manno-octulosonate cytidylyltransferase activity|0008690||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309028.1;locus_tag=LI478_RS16310;product=3-deoxy-manno-octulosonate cytidylyltransferase;protein_id=WP_002898180.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3330088 3330270 . - . ID=gene-LI478_RS16315;Name=ycaR;gbkey=Gene;gene=ycaR;gene_biotype=protein_coding;locus_tag=LI478_RS16315 NZ_CP085478.1 Protein Homology CDS 3330088 3330270 . - 0 ID=cds-WP_002898177.1;Parent=gene-LI478_RS16315;Dbxref=Genbank:WP_002898177.1;Name=WP_002898177.1;gbkey=CDS;gene=ycaR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226124.1;locus_tag=LI478_RS16315;product=protein YcaR;protein_id=WP_002898177.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3330334 3331563 . - . ID=gene-LI478_RS16320;Name=LI478_RS16320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS16320 NZ_CP085478.1 Protein Homology CDS 3330334 3331563 . - 0 ID=cds-WP_032414729.1;Parent=gene-LI478_RS16320;Dbxref=Genbank:WP_032414729.1;Name=WP_032414729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226123.1;locus_tag=LI478_RS16320;product=winged helix-turn-helix domain-containing protein;protein_id=WP_032414729.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3331618 3332598 . - . ID=gene-LI478_RS16325;Name=lpxK;gbkey=Gene;gene=lpxK;gene_biotype=protein_coding;locus_tag=LI478_RS16325 NZ_CP085478.1 Protein Homology CDS 3331618 3332598 . - 0 ID=cds-WP_023282335.1;Parent=gene-LI478_RS16325;Dbxref=Genbank:WP_023282335.1;Name=WP_023282335.1;Ontology_term=GO:0009245,GO:0009029;gbkey=CDS;gene=lpxK;go_function=tetraacyldisaccharide 4'-kinase activity|0009029||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226122.1;locus_tag=LI478_RS16325;product=tetraacyldisaccharide 4'-kinase;protein_id=WP_023282335.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3332595 3334343 . - . ID=gene-LI478_RS16330;Name=msbA;gbkey=Gene;gene=msbA;gene_biotype=protein_coding;locus_tag=LI478_RS16330 NZ_CP085478.1 Protein Homology CDS 3332595 3334343 . - 0 ID=cds-WP_002898170.1;Parent=gene-LI478_RS16330;Dbxref=Genbank:WP_002898170.1;Name=WP_002898170.1;Ontology_term=GO:0055085,GO:0005524,GO:0034040,GO:0140359,GO:0016020;gbkey=CDS;gene=msbA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled lipid transmembrane transporter activity|0034040||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226121.1;locus_tag=LI478_RS16330;product=lipid A ABC transporter ATP-binding protein/permease MsbA;protein_id=WP_002898170.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3334380 3336644 . - . ID=gene-LI478_RS16335;Name=LI478_RS16335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS16335 NZ_CP085478.1 Protein Homology CDS 3334380 3336644 . - 0 ID=cds-WP_064153104.1;Parent=gene-LI478_RS16335;Dbxref=Genbank:WP_064153104.1;Name=WP_064153104.1;Ontology_term=GO:0030420,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226120.1;locus_tag=LI478_RS16335;product=ComEC family protein;protein_id=WP_064153104.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3336850 3337137 . - . ID=gene-LI478_RS16340;Name=ihfB;gbkey=Gene;gene=ihfB;gene_biotype=protein_coding;locus_tag=LI478_RS16340 NZ_CP085478.1 Protein Homology CDS 3336850 3337137 . - 0 ID=cds-WP_002898165.1;Parent=gene-LI478_RS16340;Dbxref=Genbank:WP_002898165.1;Name=WP_002898165.1;Ontology_term=GO:0006310,GO:0006355,GO:0006417,GO:0075713,GO:0003677;gbkey=CDS;gene=ihfB;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA,regulation of translation|0006417||IEA,establishment of integrated proviral latency|0075713||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226119.1;locus_tag=LI478_RS16340;product=integration host factor subunit beta;protein_id=WP_002898165.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3337289 3338962 . - . ID=gene-LI478_RS16345;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=LI478_RS16345 NZ_CP085478.1 Protein Homology CDS 3337289 3338962 . - 0 ID=cds-WP_002898162.1;Parent=gene-LI478_RS16345;Dbxref=Genbank:WP_002898162.1;Name=WP_002898162.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsA;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123560.1;locus_tag=LI478_RS16345;product=30S ribosomal protein S1;protein_id=WP_002898162.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3339096 3339779 . - . ID=gene-LI478_RS16350;Name=cmk;gbkey=Gene;gene=cmk;gene_biotype=protein_coding;locus_tag=LI478_RS16350 NZ_CP085478.1 Protein Homology CDS 3339096 3339779 . - 0 ID=cds-WP_002898160.1;Parent=gene-LI478_RS16350;Dbxref=Genbank:WP_002898160.1;Name=WP_002898160.1;Ontology_term=GO:0015949,GO:0004127;gbkey=CDS;gene=cmk;go_function=cytidylate kinase activity|0004127||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000125007.1;locus_tag=LI478_RS16350;product=(d)CMP kinase;protein_id=WP_002898160.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3339954 3341237 . - . ID=gene-LI478_RS16355;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;locus_tag=LI478_RS16355 NZ_CP085478.1 Protein Homology CDS 3339954 3341237 . - 0 ID=cds-WP_002898157.1;Parent=gene-LI478_RS16355;Dbxref=Genbank:WP_002898157.1;Name=WP_002898157.1;Ontology_term=GO:0009423,GO:0003866;gbkey=CDS;gene=aroA;go_function=3-phosphoshikimate 1-carboxyvinyltransferase activity|0003866||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226116.1;locus_tag=LI478_RS16355;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=WP_002898157.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3341311 3342399 . - . ID=gene-LI478_RS16360;Name=serC;gbkey=Gene;gene=serC;gene_biotype=protein_coding;locus_tag=LI478_RS16360 NZ_CP085478.1 Protein Homology CDS 3341311 3342399 . - 0 ID=cds-WP_002898155.1;Parent=gene-LI478_RS16360;Dbxref=Genbank:WP_002898155.1;Name=WP_002898155.1;Ontology_term=GO:0006564,GO:0003824,GO:0004648;gbkey=CDS;gene=serC;go_function=catalytic activity|0003824||IEA,O-phospho-L-serine:2-oxoglutarate aminotransferase activity|0004648||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226115.1;locus_tag=LI478_RS16360;product=3-phosphoserine/phosphohydroxythreonine transaminase;protein_id=WP_002898155.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3342588 3343280 . - . ID=gene-LI478_RS16365;Name=LI478_RS16365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS16365 NZ_CP085478.1 Protein Homology CDS 3342588 3343280 . - 0 ID=cds-WP_002898152.1;Parent=gene-LI478_RS16365;Dbxref=Genbank:WP_002898152.1;Name=WP_002898152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226114.1;locus_tag=LI478_RS16365;product=DUF421 domain-containing protein;protein_id=WP_002898152.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3343396 3345156 . + . ID=gene-LI478_RS16370;Name=ycaO;gbkey=Gene;gene=ycaO;gene_biotype=protein_coding;locus_tag=LI478_RS16370 NZ_CP085478.1 Protein Homology CDS 3343396 3345156 . + 0 ID=cds-WP_032415649.1;Parent=gene-LI478_RS16370;Dbxref=Genbank:WP_032415649.1;Name=WP_032415649.1;gbkey=CDS;gene=ycaO;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226113.1;locus_tag=LI478_RS16370;product=30S ribosomal protein S12 methylthiotransferase accessory factor YcaO;protein_id=WP_032415649.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3345542 3346399 . + . ID=gene-LI478_RS16375;Name=focA;gbkey=Gene;gene=focA;gene_biotype=protein_coding;locus_tag=LI478_RS16375 NZ_CP085478.1 Protein Homology CDS 3345542 3346399 . + 0 ID=cds-WP_002898150.1;Parent=gene-LI478_RS16375;Dbxref=Genbank:WP_002898150.1;Name=WP_002898150.1;gbkey=CDS;gene=focA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226112.1;locus_tag=LI478_RS16375;product=formate transporter FocA;protein_id=WP_002898150.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3346451 3348733 . + . ID=gene-LI478_RS16380;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=protein_coding;locus_tag=LI478_RS16380 NZ_CP085478.1 Protein Homology CDS 3346451 3348733 . + 0 ID=cds-WP_023328691.1;Parent=gene-LI478_RS16380;Dbxref=Genbank:WP_023328691.1;Name=WP_023328691.1;Ontology_term=GO:0006113,GO:0015942,GO:0008861,GO:0005737;gbkey=CDS;gene=pflB;go_component=cytoplasm|0005737||IEA;go_function=formate C-acetyltransferase activity|0008861||IEA;go_process=fermentation|0006113||IEA,formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226111.1;locus_tag=LI478_RS16380;product=formate C-acetyltransferase;protein_id=WP_023328691.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3348925 3349665 . + . ID=gene-LI478_RS16385;Name=pflA;gbkey=Gene;gene=pflA;gene_biotype=protein_coding;locus_tag=LI478_RS16385 NZ_CP085478.1 Protein Homology CDS 3348925 3349665 . + 0 ID=cds-WP_002898145.1;Parent=gene-LI478_RS16385;Dbxref=Genbank:WP_002898145.1;Name=WP_002898145.1;Ontology_term=GO:0043365,GO:0051539;gbkey=CDS;gene=pflA;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226110.1;locus_tag=LI478_RS16385;product=pyruvate formate lyase 1-activating protein;protein_id=WP_002898145.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3349828 3350976 . - . ID=gene-LI478_RS16390;Name=LI478_RS16390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS16390 NZ_CP085478.1 Protein Homology CDS 3349828 3350976 . - 0 ID=cds-WP_004150843.1;Parent=gene-LI478_RS16390;Dbxref=Genbank:WP_004150843.1;Name=WP_004150843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226109.1;locus_tag=LI478_RS16390;product=MFS transporter;protein_id=WP_004150843.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3351251 3352114 . - . ID=gene-LI478_RS16395;Name=LI478_RS16395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS16395 NZ_CP085478.1 Protein Homology CDS 3351251 3352114 . - 0 ID=cds-WP_004183542.1;Parent=gene-LI478_RS16395;Dbxref=Genbank:WP_004183542.1;Name=WP_004183542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226107.1;locus_tag=LI478_RS16395;product=dimethyl sulfoxide reductase anchor subunit;protein_id=WP_004183542.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3352116 3352733 . - . ID=gene-LI478_RS16400;Name=dmsB;gbkey=Gene;gene=dmsB;gene_biotype=protein_coding;locus_tag=LI478_RS16400 NZ_CP085478.1 Protein Homology CDS 3352116 3352733 . - 0 ID=cds-WP_012068506.1;Parent=gene-LI478_RS16400;Dbxref=Genbank:WP_012068506.1;Name=WP_012068506.1;gbkey=CDS;gene=dmsB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226106.1;locus_tag=LI478_RS16400;product=dimethylsulfoxide reductase subunit B;protein_id=WP_012068506.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3352744 3355182 . - . ID=gene-LI478_RS16405;Name=dmsA;gbkey=Gene;gene=dmsA;gene_biotype=protein_coding;locus_tag=LI478_RS16405 NZ_CP085478.1 Protein Homology CDS 3352744 3355182 . - 0 ID=cds-WP_004147794.1;Parent=gene-LI478_RS16405;Dbxref=Genbank:WP_004147794.1;Name=WP_004147794.1;Ontology_term=GO:0009389,GO:0030151;gbkey=CDS;gene=dmsA;go_function=dimethyl sulfoxide reductase activity|0009389||IEA,molybdenum ion binding|0030151||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226105.1;locus_tag=LI478_RS16405;product=dimethylsulfoxide reductase subunit A;protein_id=WP_004147794.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3355383 3356675 . - . ID=gene-LI478_RS16410;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=LI478_RS16410 NZ_CP085478.1 Protein Homology CDS 3355383 3356675 . - 0 ID=cds-WP_021313336.1;Parent=gene-LI478_RS16410;Dbxref=Genbank:WP_021313336.1;Name=WP_021313336.1;Ontology_term=GO:0006434,GO:0004828,GO:0005737;gbkey=CDS;gene=serS;go_component=cytoplasm|0005737||IEA;go_function=serine-tRNA ligase activity|0004828||IEA;go_process=seryl-tRNA aminoacylation|0006434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000887397.1;locus_tag=LI478_RS16410;product=serine--tRNA ligase;protein_id=WP_021313336.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3356766 3358109 . - . ID=gene-LI478_RS16415;Name=rarA;gbkey=Gene;gene=rarA;gene_biotype=protein_coding;gene_synonym=mgsA;locus_tag=LI478_RS16415 NZ_CP085478.1 Protein Homology CDS 3356766 3358109 . - 0 ID=cds-WP_019704639.1;Parent=gene-LI478_RS16415;Dbxref=Genbank:WP_019704639.1;Name=WP_019704639.1;gbkey=CDS;gene=rarA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123573.1;locus_tag=LI478_RS16415;product=replication-associated recombination protein RarA;protein_id=WP_019704639.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3358118 3358729 . - . ID=gene-LI478_RS16420;Name=lolA;gbkey=Gene;gene=lolA;gene_biotype=protein_coding;locus_tag=LI478_RS16420 NZ_CP085478.1 Protein Homology CDS 3358118 3358729 . - 0 ID=cds-WP_064153728.1;Parent=gene-LI478_RS16420;Dbxref=Genbank:WP_064153728.1;Name=WP_064153728.1;Ontology_term=GO:0009306,GO:0008320;gbkey=CDS;gene=lolA;go_function=protein transmembrane transporter activity|0008320||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010354356.1;locus_tag=LI478_RS16420;product=outer membrane lipoprotein chaperone LolA;protein_id=WP_064153728.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3358852 3363105 . - . ID=gene-LI478_RS16425;Name=ftsK;gbkey=Gene;gene=ftsK;gene_biotype=protein_coding;locus_tag=LI478_RS16425 NZ_CP085478.1 Protein Homology CDS 3358852 3363105 . - 0 ID=cds-WP_064153727.1;Parent=gene-LI478_RS16425;Dbxref=Genbank:WP_064153727.1;Name=WP_064153727.1;Ontology_term=GO:0003677,GO:0005524;gbkey=CDS;gene=ftsK;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226101.1;locus_tag=LI478_RS16425;product=DNA translocase FtsK;protein_id=WP_064153727.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3363241 3363735 . - . ID=gene-LI478_RS16430;Name=lrp;gbkey=Gene;gene=lrp;gene_biotype=protein_coding;locus_tag=LI478_RS16430 NZ_CP085478.1 Protein Homology CDS 3363241 3363735 . - 0 ID=cds-WP_000228469.1;Parent=gene-LI478_RS16430;Dbxref=Genbank:WP_000228469.1;Name=WP_000228469.1;gbkey=CDS;gene=lrp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001591745.1;locus_tag=LI478_RS16430;product=leucine-responsive transcriptional regulator Lrp;protein_id=WP_000228469.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3364268 3365236 . + . ID=gene-LI478_RS16435;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=LI478_RS16435 NZ_CP085478.1 Protein Homology CDS 3364268 3365236 . + 0 ID=cds-WP_002898019.1;Parent=gene-LI478_RS16435;Dbxref=Genbank:WP_002898019.1;Name=WP_002898019.1;Ontology_term=GO:0019430,GO:0004791;gbkey=CDS;gene=trxB;go_function=thioredoxin-disulfide reductase activity|0004791||IEA;go_process=removal of superoxide radicals|0019430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226098.1;locus_tag=LI478_RS16435;product=thioredoxin-disulfide reductase;protein_id=WP_002898019.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3365351 3367117 . + . ID=gene-LI478_RS16440;Name=cydD;gbkey=Gene;gene=cydD;gene_biotype=protein_coding;locus_tag=LI478_RS16440 NZ_CP085478.1 Protein Homology CDS 3365351 3367117 . + 0 ID=cds-WP_021441488.1;Parent=gene-LI478_RS16440;Dbxref=Genbank:WP_021441488.1;Name=WP_021441488.1;Ontology_term=GO:0042883,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;gene=cydD;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=cysteine transport|0042883||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226097.1;locus_tag=LI478_RS16440;product=cysteine/glutathione ABC transporter permease/ATP-binding protein CydD;protein_id=WP_021441488.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3367118 3368839 . + . ID=gene-LI478_RS16445;Name=cydC;gbkey=Gene;gene=cydC;gene_biotype=protein_coding;locus_tag=LI478_RS16445 NZ_CP085478.1 Protein Homology CDS 3367118 3368839 . + 0 ID=cds-WP_032414725.1;Parent=gene-LI478_RS16445;Dbxref=Genbank:WP_032414725.1;Name=WP_032414725.1;Ontology_term=GO:0034775,GO:0045454,GO:0005524,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;gene=cydC;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=glutathione transmembrane transport|0034775||IEA,cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226096.1;locus_tag=LI478_RS16445;product=cysteine/glutathione ABC transporter ATP-binding protein/permease CydC;protein_id=WP_032414725.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3368884 3369585 . + . ID=gene-LI478_RS16450;Name=aat;gbkey=Gene;gene=aat;gene_biotype=protein_coding;locus_tag=LI478_RS16450 NZ_CP085478.1 Protein Homology CDS 3368884 3369585 . + 0 ID=cds-WP_032414724.1;Parent=gene-LI478_RS16450;Dbxref=Genbank:WP_032414724.1;Name=WP_032414724.1;Ontology_term=GO:0006508,GO:0008914;gbkey=CDS;gene=aat;go_function=leucyltransferase activity|0008914||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002898014.1;locus_tag=LI478_RS16450;product=leucyl/phenylalanyl-tRNA--protein transferase;protein_id=WP_032414724.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3369939 3370157 . + . ID=gene-LI478_RS16455;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=LI478_RS16455 NZ_CP085478.1 Protein Homology CDS 3369939 3370157 . + 0 ID=cds-WP_001040187.1;Parent=gene-LI478_RS16455;Dbxref=Genbank:WP_001040187.1;Name=WP_001040187.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001040186.1;locus_tag=LI478_RS16455;product=translation initiation factor IF-1;protein_id=WP_001040187.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3370276 3372555 . - . ID=gene-LI478_RS16460;Name=clpA;gbkey=Gene;gene=clpA;gene_biotype=protein_coding;locus_tag=LI478_RS16460 NZ_CP085478.1 Protein Homology CDS 3370276 3372555 . - 0 ID=cds-WP_002896522.1;Parent=gene-LI478_RS16460;Dbxref=Genbank:WP_002896522.1;Name=WP_002896522.1;Ontology_term=GO:0043335,GO:0005524,GO:0016887;gbkey=CDS;gene=clpA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein unfolding|0043335||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226093.1;locus_tag=LI478_RS16460;product=ATP-dependent Clp protease ATP-binding subunit ClpA;protein_id=WP_002896522.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3372586 3372903 . - . ID=gene-LI478_RS16465;Name=clpS;gbkey=Gene;gene=clpS;gene_biotype=protein_coding;locus_tag=LI478_RS16465 NZ_CP085478.1 Protein Homology CDS 3372586 3372903 . - 0 ID=cds-WP_002896520.1;Parent=gene-LI478_RS16465;Dbxref=Genbank:WP_002896520.1;Name=WP_002896520.1;Ontology_term=GO:0006508;gbkey=CDS;gene=clpS;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226092.1;locus_tag=LI478_RS16465;product=ATP-dependent Clp protease adapter ClpS;protein_id=WP_002896520.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3373229 3373450 . + . ID=gene-LI478_RS16470;Name=cspD;gbkey=Gene;gene=cspD;gene_biotype=protein_coding;locus_tag=LI478_RS16470 NZ_CP085478.1 Protein Homology CDS 3373229 3373450 . + 0 ID=cds-WP_002896516.1;Parent=gene-LI478_RS16470;Dbxref=Genbank:WP_002896516.1;Name=WP_002896516.1;gbkey=CDS;gene=cspD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226091.1;locus_tag=LI478_RS16470;product=cold shock-like protein CspD;protein_id=WP_002896516.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3373527 3375467 . - . ID=gene-LI478_RS16475;Name=macB;gbkey=Gene;gene=macB;gene_biotype=protein_coding;locus_tag=LI478_RS16475 NZ_CP085478.1 Protein Homology CDS 3373527 3375467 . - 0 ID=cds-WP_004150848.1;Parent=gene-LI478_RS16475;Dbxref=Genbank:WP_004150848.1;Name=WP_004150848.1;Ontology_term=GO:0005524,GO:0016020;gbkey=CDS;gene=macB;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226090.1;locus_tag=LI478_RS16475;product=macrolide ABC transporter ATP-binding protein/permease MacB;protein_id=WP_004150848.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3375464 3376579 . - . ID=gene-LI478_RS16480;Name=macA;gbkey=Gene;gene=macA;gene_biotype=protein_coding;locus_tag=LI478_RS16480 NZ_CP085478.1 Protein Homology CDS 3375464 3376579 . - 0 ID=cds-WP_002896440.1;Parent=gene-LI478_RS16480;Dbxref=Genbank:WP_002896440.1;Name=WP_002896440.1;Ontology_term=GO:1990961,GO:0022857,GO:0019898,GO:1990195;gbkey=CDS;gene=macA;go_component=extrinsic component of membrane|0019898||IEA,macrolide transmembrane transporter complex|1990195||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226089.1;locus_tag=LI478_RS16480;product=macrolide transporter subunit MacA;protein_id=WP_002896440.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3376726 3378384 . - . ID=gene-LI478_RS16485;Name=LI478_RS16485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS16485 NZ_CP085478.1 Protein Homology CDS 3376726 3378384 . - 0 ID=cds-WP_004176693.1;Parent=gene-LI478_RS16485;Dbxref=Genbank:WP_004176693.1;Name=WP_004176693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706761.1;locus_tag=LI478_RS16485;product=ATP-dependent endonuclease;protein_id=WP_004176693.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3378804 3379499 . + . ID=gene-LI478_RS16490;Name=aqpZ;gbkey=Gene;gene=aqpZ;gene_biotype=protein_coding;locus_tag=LI478_RS16490 NZ_CP085478.1 Protein Homology CDS 3378804 3379499 . + 0 ID=cds-WP_002896434.1;Parent=gene-LI478_RS16490;Dbxref=Genbank:WP_002896434.1;Name=WP_002896434.1;Ontology_term=GO:0006833,GO:0015250;gbkey=CDS;gene=aqpZ;go_function=water channel activity|0015250||IEA;go_process=water transport|0006833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226086.1;locus_tag=LI478_RS16490;product=aquaporin Z;protein_id=WP_002896434.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3379615 3380514 . + . ID=gene-LI478_RS16495;Name=LI478_RS16495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS16495 NZ_CP085478.1 Protein Homology CDS 3379615 3380514 . + 0 ID=cds-WP_004147773.1;Parent=gene-LI478_RS16495;Dbxref=Genbank:WP_004147773.1;Name=WP_004147773.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226085.1;locus_tag=LI478_RS16495;product=lysine exporter LysO family protein;protein_id=WP_004147773.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3380658 3382310 . + . ID=gene-LI478_RS16500;Name=hcp;gbkey=Gene;gene=hcp;gene_biotype=protein_coding;gene_synonym=priS;locus_tag=LI478_RS16500 NZ_CP085478.1 Protein Homology CDS 3380658 3382310 . + 0 ID=cds-WP_227394146.1;Parent=gene-LI478_RS16500;Dbxref=Genbank:WP_227394146.1;Name=WP_227394146.1;Ontology_term=GO:0016661,GO:0051536;gbkey=CDS;gene=hcp;go_function=oxidoreductase activity%2C acting on other nitrogenous compounds as donors|0016661||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122080.1;locus_tag=LI478_RS16500;product=hydroxylamine reductase;protein_id=WP_227394146.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3382321 3383289 . + . ID=gene-LI478_RS16505;Name=hcr;gbkey=Gene;gene=hcr;gene_biotype=protein_coding;locus_tag=LI478_RS16505 NZ_CP085478.1 Protein Homology CDS 3382321 3383289 . + 0 ID=cds-WP_004147771.1;Parent=gene-LI478_RS16505;Dbxref=Genbank:WP_004147771.1;Name=WP_004147771.1;Ontology_term=GO:0016491,GO:0051536;gbkey=CDS;gene=hcr;go_function=oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226083.1;locus_tag=LI478_RS16505;product=NADH oxidoreductase;protein_id=WP_004147771.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3383501 3383935 . - . ID=gene-LI478_RS16510;Name=LI478_RS16510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS16510 NZ_CP085478.1 Protein Homology CDS 3383501 3383935 . - 0 ID=cds-WP_012068500.1;Parent=gene-LI478_RS16510;Dbxref=Genbank:WP_012068500.1;Name=WP_012068500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226082.1;locus_tag=LI478_RS16510;product=DoxX family protein;protein_id=WP_012068500.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3384087 3385805 . + . ID=gene-LI478_RS16515;Name=poxB;gbkey=Gene;gene=poxB;gene_biotype=protein_coding;locus_tag=LI478_RS16515 NZ_CP085478.1 Protein Homology CDS 3384087 3385805 . + 0 ID=cds-WP_004176700.1;Parent=gene-LI478_RS16515;Dbxref=Genbank:WP_004176700.1;Name=WP_004176700.1;Ontology_term=GO:0006090,GO:0000287,GO:0030976,GO:0052737;gbkey=CDS;gene=poxB;go_function=magnesium ion binding|0000287||IEA,thiamine pyrophosphate binding|0030976||IEA,pyruvate dehydrogenase (quinone) activity|0052737||IEA;go_process=pyruvate metabolic process|0006090||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226081.1;locus_tag=LI478_RS16515;product=ubiquinone-dependent pyruvate dehydrogenase;protein_id=WP_004176700.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3385844 3386845 . + . ID=gene-LI478_RS16520;Name=ltaE;gbkey=Gene;gene=ltaE;gene_biotype=protein_coding;locus_tag=LI478_RS16520 NZ_CP085478.1 Protein Homology CDS 3385844 3386845 . + 0 ID=cds-WP_004176702.1;Parent=gene-LI478_RS16520;Dbxref=Genbank:WP_004176702.1;Name=WP_004176702.1;Ontology_term=GO:0006520,GO:0016829;gbkey=CDS;gene=ltaE;go_function=lyase activity|0016829||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226080.1;locus_tag=LI478_RS16520;product=low-specificity L-threonine aldolase;protein_id=WP_004176702.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3386856 3388298 . + . ID=gene-LI478_RS16525;Name=LI478_RS16525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS16525 NZ_CP085478.1 Protein Homology CDS 3386856 3388298 . + 0 ID=cds-WP_021313342.1;Parent=gene-LI478_RS16525;Dbxref=Genbank:WP_021313342.1;Name=WP_021313342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226079.1;locus_tag=LI478_RS16525;product=SDR family oxidoreductase;protein_id=WP_021313342.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3388386 3389399 . + . ID=gene-LI478_RS16530;Name=LI478_RS16530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS16530 NZ_CP085478.1 Protein Homology CDS 3388386 3389399 . + 0 ID=cds-WP_064153589.1;Parent=gene-LI478_RS16530;Dbxref=Genbank:WP_064153589.1;Name=WP_064153589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226078.1;locus_tag=LI478_RS16530;product=NAD(P)-dependent oxidoreductase;protein_id=WP_064153589.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3389396 3390226 . - . ID=gene-LI478_RS16535;Name=LI478_RS16535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS16535 NZ_CP085478.1 Protein Homology CDS 3389396 3390226 . - 0 ID=cds-WP_004209681.1;Parent=gene-LI478_RS16535;Dbxref=Genbank:WP_004209681.1;Name=WP_004209681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226077.1;locus_tag=LI478_RS16535;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_004209681.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3390258 3391397 . - . ID=gene-LI478_RS16540;Name=LI478_RS16540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS16540 NZ_CP085478.1 Protein Homology CDS 3390258 3391397 . - 0 ID=cds-WP_048987165.1;Parent=gene-LI478_RS16540;Dbxref=Genbank:WP_048987165.1;Name=WP_048987165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226076.1;locus_tag=LI478_RS16540;product=GGDEF domain-containing protein;protein_id=WP_048987165.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3391876 3391974 . + . ID=gene-LI478_RS16545;Name=LI478_RS16545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS16545 NZ_CP085478.1 Protein Homology CDS 3391876 3391974 . + 0 ID=cds-WP_229929336.1;Parent=gene-LI478_RS16545;Dbxref=Genbank:WP_229929336.1;Name=WP_229929336.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018986.2;locus_tag=LI478_RS16545;product=hypothetical protein;protein_id=WP_229929336.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3392276 3392791 . + . ID=gene-LI478_RS16550;Name=LI478_RS16550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS16550 NZ_CP085478.1 Protein Homology CDS 3392276 3392791 . + 0 ID=cds-WP_002896394.1;Parent=gene-LI478_RS16550;Dbxref=Genbank:WP_002896394.1;Name=WP_002896394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226075.1;locus_tag=LI478_RS16550;product=lipoprotein;protein_id=WP_002896394.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3393018 3393746 . + . ID=gene-LI478_RS16555;Name=artP;gbkey=Gene;gene=artP;gene_biotype=protein_coding;locus_tag=LI478_RS16555 NZ_CP085478.1 Protein Homology CDS 3393018 3393746 . + 0 ID=cds-WP_002896392.1;Parent=gene-LI478_RS16555;Dbxref=Genbank:WP_002896392.1;Name=WP_002896392.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424;gbkey=CDS;gene=artP;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742668.1;locus_tag=LI478_RS16555;product=arginine ABC transporter ATP-binding protein ArtP;protein_id=WP_002896392.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3393767 3394498 . + . ID=gene-LI478_RS16560;Name=artJ;gbkey=Gene;gene=artJ;gene_biotype=protein_coding;locus_tag=LI478_RS16560 NZ_CP085478.1 Protein Homology CDS 3393767 3394498 . + 0 ID=cds-WP_002896390.1;Parent=gene-LI478_RS16560;Dbxref=Genbank:WP_002896390.1;Name=WP_002896390.1;gbkey=CDS;gene=artJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226073.1;locus_tag=LI478_RS16560;product=arginine ABC transporter substrate-binding protein;protein_id=WP_002896390.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3394505 3395221 . + . ID=gene-LI478_RS16565;Name=artQ;gbkey=Gene;gene=artQ;gene_biotype=protein_coding;locus_tag=LI478_RS16565 NZ_CP085478.1 Protein Homology CDS 3394505 3395221 . + 0 ID=cds-WP_002896386.1;Parent=gene-LI478_RS16565;Dbxref=Genbank:WP_002896386.1;Name=WP_002896386.1;Ontology_term=GO:0055085,GO:0071705,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=artQ;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA,nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226072.1;locus_tag=LI478_RS16565;product=arginine ABC transporter permease ArtQ;protein_id=WP_002896386.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3395221 3395889 . + . ID=gene-LI478_RS16570;Name=artM;gbkey=Gene;gene=artM;gene_biotype=protein_coding;locus_tag=LI478_RS16570 NZ_CP085478.1 Protein Homology CDS 3395221 3395889 . + 0 ID=cds-WP_004141917.1;Parent=gene-LI478_RS16570;Dbxref=Genbank:WP_004141917.1;Name=WP_004141917.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=artM;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226071.1;locus_tag=LI478_RS16570;product=arginine ABC transporter permease ArtM;protein_id=WP_004141917.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3396074 3396805 . + . ID=gene-LI478_RS16575;Name=artJ;gbkey=Gene;gene=artJ;gene_biotype=protein_coding;locus_tag=LI478_RS16575 NZ_CP085478.1 Protein Homology CDS 3396074 3396805 . + 0 ID=cds-WP_002896384.1;Parent=gene-LI478_RS16575;Dbxref=Genbank:WP_002896384.1;Name=WP_002896384.1;gbkey=CDS;gene=artJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226070.1;locus_tag=LI478_RS16575;product=ABC transporter substrate-binding protein ArtJ;protein_id=WP_002896384.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3396892 3398364 . - . ID=gene-LI478_RS16580;Name=LI478_RS16580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS16580 NZ_CP085478.1 Protein Homology CDS 3396892 3398364 . - 0 ID=cds-WP_016531909.1;Parent=gene-LI478_RS16580;Dbxref=Genbank:WP_016531909.1;Name=WP_016531909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226069.1;locus_tag=LI478_RS16580;product=ATP-binding protein;protein_id=WP_016531909.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3398361 3399077 . - . ID=gene-LI478_RS16585;Name=LI478_RS16585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS16585 NZ_CP085478.1 Protein Homology CDS 3398361 3399077 . - 0 ID=cds-WP_002896380.1;Parent=gene-LI478_RS16585;Dbxref=Genbank:WP_002896380.1;Name=WP_002896380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226068.1;locus_tag=LI478_RS16585;product=response regulator transcription factor;protein_id=WP_002896380.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3399156 3400283 . - . ID=gene-LI478_RS16590;Name=rlmC;gbkey=Gene;gene=rlmC;gene_biotype=protein_coding;locus_tag=LI478_RS16590 NZ_CP085478.1 Protein Homology CDS 3399156 3400283 . - 0 ID=cds-WP_002896378.1;Parent=gene-LI478_RS16590;Dbxref=Genbank:WP_002896378.1;Name=WP_002896378.1;Ontology_term=GO:0008649;gbkey=CDS;gene=rlmC;go_function=rRNA methyltransferase activity|0008649||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226067.1;locus_tag=LI478_RS16590;product=23S rRNA (uracil(747)-C(5))-methyltransferase RlmC;protein_id=WP_002896378.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3400325 3400813 . - . ID=gene-LI478_RS16595;Name=LI478_RS16595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS16595 NZ_CP085478.1 Protein Homology CDS 3400325 3400813 . - 0 ID=cds-WP_002896376.1;Parent=gene-LI478_RS16595;Dbxref=Genbank:WP_002896376.1;Name=WP_002896376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226066.1;locus_tag=LI478_RS16595;product=DUF2593 family protein;protein_id=WP_002896376.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3400871 3401716 . - . ID=gene-LI478_RS16600;Name=potI;gbkey=Gene;gene=potI;gene_biotype=protein_coding;locus_tag=LI478_RS16600 NZ_CP085478.1 Protein Homology CDS 3400871 3401716 . - 0 ID=cds-WP_002896372.1;Parent=gene-LI478_RS16600;Dbxref=Genbank:WP_002896372.1;Name=WP_002896372.1;Ontology_term=GO:0055085;gbkey=CDS;gene=potI;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226065.1;locus_tag=LI478_RS16600;product=putrescine ABC transporter permease PotI;protein_id=WP_002896372.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3401713 3402666 . - . ID=gene-LI478_RS16605;Name=potH;gbkey=Gene;gene=potH;gene_biotype=protein_coding;locus_tag=LI478_RS16605 NZ_CP085478.1 Protein Homology CDS 3401713 3402666 . - 0 ID=cds-WP_002896371.1;Parent=gene-LI478_RS16605;Dbxref=Genbank:WP_002896371.1;Name=WP_002896371.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=potH;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226064.1;locus_tag=LI478_RS16605;product=putrescine ABC transporter permease PotH;protein_id=WP_002896371.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3402677 3403810 . - . ID=gene-LI478_RS16610;Name=potG;gbkey=Gene;gene=potG;gene_biotype=protein_coding;locus_tag=LI478_RS16610 NZ_CP085478.1 Protein Homology CDS 3402677 3403810 . - 0 ID=cds-WP_002896370.1;Parent=gene-LI478_RS16610;Dbxref=Genbank:WP_002896370.1;Name=WP_002896370.1;Ontology_term=GO:0015846,GO:0055085,GO:0005524,GO:0015417,GO:0022857,GO:0043190;gbkey=CDS;gene=potG;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type polyamine transporter activity|0015417||IEA,transmembrane transporter activity|0022857||IEA;go_process=polyamine transport|0015846||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000996010.1;locus_tag=LI478_RS16610;product=putrescine ABC transporter ATP-binding subunit PotG;protein_id=WP_002896370.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3403974 3405086 . - . ID=gene-LI478_RS16615;Name=potF;gbkey=Gene;gene=potF;gene_biotype=protein_coding;locus_tag=LI478_RS16615 NZ_CP085478.1 Protein Homology CDS 3403974 3405086 . - 0 ID=cds-WP_002896368.1;Parent=gene-LI478_RS16615;Dbxref=Genbank:WP_002896368.1;Name=WP_002896368.1;Ontology_term=GO:0015846,GO:0019808,GO:0042597;gbkey=CDS;gene=potF;go_component=periplasmic space|0042597||IEA;go_function=polyamine binding|0019808||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226062.1;locus_tag=LI478_RS16615;product=spermidine/putrescine ABC transporter substrate-binding protein PotF;protein_id=WP_002896368.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3405435 3405914 . - . ID=gene-LI478_RS16620;Name=LI478_RS16620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS16620 NZ_CP085478.1 Protein Homology CDS 3405435 3405914 . - 0 ID=cds-WP_002896365.1;Parent=gene-LI478_RS16620;Dbxref=Genbank:WP_002896365.1;Name=WP_002896365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226061.1;locus_tag=LI478_RS16620;product=YbjN domain-containing protein;protein_id=WP_002896365.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3406003 3406905 . - . ID=gene-LI478_RS16625;Name=rimK;gbkey=Gene;gene=rimK;gene_biotype=protein_coding;locus_tag=LI478_RS16625 NZ_CP085478.1 Protein Homology CDS 3406003 3406905 . - 0 ID=cds-WP_002896363.1;Parent=gene-LI478_RS16625;Dbxref=Genbank:WP_002896363.1;Name=WP_002896363.1;Ontology_term=GO:0036211,GO:0005524,GO:0046872;gbkey=CDS;gene=rimK;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226060.1;locus_tag=LI478_RS16625;product=30S ribosomal protein S6--L-glutamate ligase;protein_id=WP_002896363.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3407020 3407742 . - . ID=gene-LI478_RS16630;Name=nfsA;gbkey=Gene;gene=nfsA;gene_biotype=protein_coding;locus_tag=LI478_RS16630 NZ_CP085478.1 Protein Homology CDS 3407020 3407742 . - 0 ID=cds-WP_016529763.1;Parent=gene-LI478_RS16630;Dbxref=Genbank:WP_016529763.1;Name=WP_016529763.1;gbkey=CDS;gene=nfsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308958.1;locus_tag=LI478_RS16630;product=nitroreductase NfsA;protein_id=WP_016529763.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3407726 3408013 . - . ID=gene-LI478_RS16635;Name=LI478_RS16635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS16635 NZ_CP085478.1 Protein Homology CDS 3407726 3408013 . - 0 ID=cds-WP_002896354.1;Parent=gene-LI478_RS16635;Dbxref=Genbank:WP_002896354.1;Name=WP_002896354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133107.1;locus_tag=LI478_RS16635;product=YbjC family protein;protein_id=WP_002896354.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3408216 3408479 . + . ID=gene-LI478_RS16640;Name=LI478_RS16640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS16640 NZ_CP085478.1 Protein Homology CDS 3408216 3408479 . + 0 ID=cds-WP_002896352.1;Parent=gene-LI478_RS16640;Dbxref=Genbank:WP_002896352.1;Name=WP_002896352.1;Ontology_term=GO:0097573;gbkey=CDS;go_function=glutathione oxidoreductase activity|0097573||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226056.1;locus_tag=LI478_RS16640;product=GrxA family glutaredoxin;protein_id=WP_002896352.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3408486 3408869 . - . ID=gene-LI478_RS16645;Name=ybjM;gbkey=Gene;gene=ybjM;gene_biotype=protein_coding;locus_tag=LI478_RS16645 NZ_CP085478.1 Protein Homology CDS 3408486 3408869 . - 0 ID=cds-WP_002896351.1;Parent=gene-LI478_RS16645;Dbxref=Genbank:WP_002896351.1;Name=WP_002896351.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ybjM;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226055.1;locus_tag=LI478_RS16645;product=inner membrane protein YbjM;protein_id=WP_002896351.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3409136 3410821 . + . ID=gene-LI478_RS16650;Name=LI478_RS16650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS16650 NZ_CP085478.1 Protein Homology CDS 3409136 3410821 . + 0 ID=cds-WP_060613111.1;Parent=gene-LI478_RS16650;Dbxref=Genbank:WP_060613111.1;Name=WP_060613111.1;Ontology_term=GO:0006813,GO:0008324;gbkey=CDS;go_function=cation transmembrane transporter activity|0008324||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004179131.1;locus_tag=LI478_RS16650;product=aspartate:alanine antiporter;protein_id=WP_060613111.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3410999 3411562 . - . ID=gene-LI478_RS16655;Name=LI478_RS16655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS16655 NZ_CP085478.1 Protein Homology CDS 3410999 3411562 . - 0 ID=cds-WP_004223846.1;Parent=gene-LI478_RS16655;Dbxref=Genbank:WP_004223846.1;Name=WP_004223846.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226012.1;locus_tag=LI478_RS16655;product=TetR family transcriptional regulator;protein_id=WP_004223846.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3411645 3412847 . + . ID=gene-LI478_RS16660;Name=LI478_RS16660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS16660 NZ_CP085478.1 Protein Homology CDS 3411645 3412847 . + 0 ID=cds-WP_004151719.1;Parent=gene-LI478_RS16660;Dbxref=Genbank:WP_004151719.1;Name=WP_004151719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226011.1;locus_tag=LI478_RS16660;product=MFS transporter;protein_id=WP_004151719.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3412847 3413659 . + . ID=gene-LI478_RS16665;Name=LI478_RS16665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS16665 NZ_CP085478.1 Protein Homology CDS 3412847 3413659 . + 0 ID=cds-WP_004141971.1;Parent=gene-LI478_RS16665;Dbxref=Genbank:WP_004141971.1;Name=WP_004141971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226010.1;locus_tag=LI478_RS16665;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_004141971.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3413697 3414929 . - . ID=gene-LI478_RS16670;Name=kdeA;gbkey=Gene;gene=kdeA;gene_biotype=protein_coding;locus_tag=LI478_RS16670 NZ_CP085478.1 Protein Homology CDS 3413697 3414929 . - 0 ID=cds-WP_004141972.1;Parent=gene-LI478_RS16670;Dbxref=Genbank:WP_004141972.1;Name=WP_004141972.1;gbkey=CDS;gene=kdeA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226009.1;locus_tag=LI478_RS16670;product=multidrug efflux MFS transporter KdeA;protein_id=WP_004141972.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3415257 3415850 . + . ID=gene-LI478_RS16675;Name=ybjG;gbkey=Gene;gene=ybjG;gene_biotype=protein_coding;locus_tag=LI478_RS16675 NZ_CP085478.1 Protein Homology CDS 3415257 3415850 . + 0 ID=cds-WP_004141974.1;Parent=gene-LI478_RS16675;Dbxref=Genbank:WP_004141974.1;Name=WP_004141974.1;Ontology_term=GO:0050380,GO:0005886;gbkey=CDS;gene=ybjG;go_component=plasma membrane|0005886||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226008.1;locus_tag=LI478_RS16675;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_004141974.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3415952 3416710 . + . ID=gene-LI478_RS16680;Name=deoR;gbkey=Gene;gene=deoR;gene_biotype=protein_coding;locus_tag=LI478_RS16680 NZ_CP085478.1 Protein Homology CDS 3415952 3416710 . + 0 ID=cds-WP_004151717.1;Parent=gene-LI478_RS16680;Dbxref=Genbank:WP_004151717.1;Name=WP_004151717.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=deoR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226007.1;locus_tag=LI478_RS16680;product=DNA-binding transcriptional repressor DeoR;protein_id=WP_004151717.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3416749 3417951 . - . ID=gene-LI478_RS16685;Name=dacC;gbkey=Gene;gene=dacC;gene_biotype=protein_coding;locus_tag=LI478_RS16685 NZ_CP085478.1 Protein Homology CDS 3416749 3417951 . - 0 ID=cds-WP_004191175.1;Parent=gene-LI478_RS16685;Dbxref=Genbank:WP_004191175.1;Name=WP_004191175.1;gbkey=CDS;gene=dacC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226006.1;locus_tag=LI478_RS16685;product=serine-type D-Ala-D-Ala carboxypeptidase;protein_id=WP_004191175.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3418599 3418727 . - . ID=gene-LI478_RS16690;Name=LI478_RS16690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS16690 NZ_CP085478.1 Protein Homology CDS 3418599 3418727 . - 0 ID=cds-WP_032409999.1;Parent=gene-LI478_RS16690;Dbxref=Genbank:WP_032409999.1;Name=WP_032409999.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226005.1;locus_tag=LI478_RS16690;product=hypothetical protein;protein_id=WP_032409999.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3419941 3420909 . + . ID=gene-LI478_RS16695;Name=LI478_RS16695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS16695 NZ_CP085478.1 Protein Homology CDS 3419941 3420909 . + 0 ID=cds-WP_004225014.1-7;Parent=gene-LI478_RS16695;Dbxref=Genbank:WP_004225014.1;Name=WP_004225014.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=LI478_RS16695;product=IS5 family transposase;protein_id=WP_004225014.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3421322 3421948 . + . ID=gene-LI478_RS16700;Name=LI478_RS16700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS16700 NZ_CP085478.1 Protein Homology CDS 3421322 3421948 . + 0 ID=cds-WP_004176727.1;Parent=gene-LI478_RS16700;Dbxref=Genbank:WP_004176727.1;Name=WP_004176727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226004.1;locus_tag=LI478_RS16700;product=glutathione S-transferase family protein;protein_id=WP_004176727.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3421951 3423060 . - . ID=gene-LI478_RS16705;Name=LI478_RS16705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS16705 NZ_CP085478.1 Protein Homology CDS 3421951 3423060 . - 0 ID=cds-WP_004141981.1;Parent=gene-LI478_RS16705;Dbxref=Genbank:WP_004141981.1;Name=WP_004141981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226003.1;locus_tag=LI478_RS16705;product=PQQ-dependent sugar dehydrogenase;protein_id=WP_004141981.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3423176 3423559 . - . ID=gene-LI478_RS16710;Name=bssR;gbkey=Gene;gene=bssR;gene_biotype=protein_coding;locus_tag=LI478_RS16710 NZ_CP085478.1 Protein Homology CDS 3423176 3423559 . - 0 ID=cds-WP_004151712.1;Parent=gene-LI478_RS16710;Dbxref=Genbank:WP_004151712.1;Name=WP_004151712.1;gbkey=CDS;gene=bssR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226002.1;locus_tag=LI478_RS16710;product=biofilm formation regulator BssR;protein_id=WP_004151712.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3423938 3425179 . + . ID=gene-LI478_RS16715;Name=LI478_RS16715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS16715 NZ_CP085478.1 Protein Homology CDS 3423938 3425179 . + 0 ID=cds-WP_004147732.1;Parent=gene-LI478_RS16715;Dbxref=Genbank:WP_004147732.1;Name=WP_004147732.1;Ontology_term=GO:0008643,GO:0005351,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=carbohydrate:proton symporter activity|0005351||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226001.1;locus_tag=LI478_RS16715;product=oligosaccharide MFS transporter;protein_id=WP_004147732.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3425412 3426737 . + . ID=gene-LI478_RS16720;Name=rimO;gbkey=Gene;gene=rimO;gene_biotype=protein_coding;locus_tag=LI478_RS16720 NZ_CP085478.1 Protein Homology CDS 3425412 3426737 . + 0 ID=cds-WP_004141985.1;Parent=gene-LI478_RS16720;Dbxref=Genbank:WP_004141985.1;Name=WP_004141985.1;Ontology_term=GO:0018339,GO:0008172,GO:0016782,GO:0051539,GO:1904047;gbkey=CDS;gene=rimO;go_function=S-methyltransferase activity|0008172||IEA,transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid|0018339||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226000.1;locus_tag=LI478_RS16720;product=30S ribosomal protein S12 methylthiotransferase RimO;protein_id=WP_004141985.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3427141 3428052 . - . ID=gene-LI478_RS16725;Name=gsiD;gbkey=Gene;gene=gsiD;gene_biotype=protein_coding;locus_tag=LI478_RS16725 NZ_CP085478.1 Protein Homology CDS 3427141 3428052 . - 0 ID=cds-WP_004147729.1;Parent=gene-LI478_RS16725;Dbxref=Genbank:WP_004147729.1;Name=WP_004147729.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=gsiD;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225999.1;locus_tag=LI478_RS16725;product=glutathione ABC transporter permease GsiD;protein_id=WP_004147729.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3428054 3428974 . - . ID=gene-LI478_RS16730;Name=gsiC;gbkey=Gene;gene=gsiC;gene_biotype=protein_coding;locus_tag=LI478_RS16730 NZ_CP085478.1 Protein Homology CDS 3428054 3428974 . - 0 ID=cds-WP_002892997.1;Parent=gene-LI478_RS16730;Dbxref=Genbank:WP_002892997.1;Name=WP_002892997.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=gsiC;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225998.1;locus_tag=LI478_RS16730;product=glutathione ABC transporter permease GsiC;protein_id=WP_002892997.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3429021 3430562 . - . ID=gene-LI478_RS16735;Name=gsiB;gbkey=Gene;gene=gsiB;gene_biotype=protein_coding;locus_tag=LI478_RS16735 NZ_CP085478.1 Protein Homology CDS 3429021 3430562 . - 0 ID=cds-WP_032414721.1;Parent=gene-LI478_RS16735;Dbxref=Genbank:WP_032414721.1;Name=WP_032414721.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=gsiB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225997.1;locus_tag=LI478_RS16735;product=glutathione ABC transporter substrate-binding protein GsiB;protein_id=WP_032414721.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3430595 3432454 . - . ID=gene-LI478_RS16740;Name=gsiA;gbkey=Gene;gene=gsiA;gene_biotype=protein_coding;locus_tag=LI478_RS16740 NZ_CP085478.1 Protein Homology CDS 3430595 3432454 . - 0 ID=cds-WP_021312990.1;Parent=gene-LI478_RS16740;Dbxref=Genbank:WP_021312990.1;Name=WP_021312990.1;Ontology_term=GO:0006810,GO:0000166,GO:0005524;gbkey=CDS;gene=gsiA;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225996.1;locus_tag=LI478_RS16740;product=glutathione ABC transporter ATP-binding protein GsiA;protein_id=WP_021312990.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3432472 3433413 . - . ID=gene-LI478_RS16745;Name=iaaA;gbkey=Gene;gene=iaaA;gene_biotype=protein_coding;locus_tag=LI478_RS16745 NZ_CP085478.1 Protein Homology CDS 3432472 3433413 . - 0 ID=cds-WP_004147725.1;Parent=gene-LI478_RS16745;Dbxref=Genbank:WP_004147725.1;Name=WP_004147725.1;gbkey=CDS;gene=iaaA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225995.1;locus_tag=LI478_RS16745;product=beta-aspartyl-peptidase;protein_id=WP_004147725.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3433649 3434884 . + . ID=gene-LI478_RS16750;Name=moeA;gbkey=Gene;gene=moeA;gene_biotype=protein_coding;locus_tag=LI478_RS16750 NZ_CP085478.1 Protein Homology CDS 3433649 3434884 . + 0 ID=cds-WP_029602270.1;Parent=gene-LI478_RS16750;Dbxref=Genbank:WP_029602270.1;Name=WP_029602270.1;Ontology_term=GO:0006777,GO:0032324;gbkey=CDS;gene=moeA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA,molybdopterin cofactor biosynthetic process|0032324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225994.1;locus_tag=LI478_RS16750;product=molybdopterin molybdotransferase MoeA;protein_id=WP_029602270.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3434884 3435639 . + . ID=gene-LI478_RS16755;Name=moeB;gbkey=Gene;gene=moeB;gene_biotype=protein_coding;locus_tag=LI478_RS16755 NZ_CP085478.1 Protein Homology CDS 3434884 3435639 . + 0 ID=cds-WP_004176736.1;Parent=gene-LI478_RS16755;Dbxref=Genbank:WP_004176736.1;Name=WP_004176736.1;Ontology_term=GO:0006777,GO:0008641;gbkey=CDS;gene=moeB;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225993.1;locus_tag=LI478_RS16755;product=molybdopterin-synthase adenylyltransferase MoeB;protein_id=WP_004176736.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3435794 3436693 . + . ID=gene-LI478_RS16760;Name=LI478_RS16760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS16760 NZ_CP085478.1 Protein Homology CDS 3435794 3436693 . + 0 ID=cds-WP_223371268.1;Parent=gene-LI478_RS16760;Dbxref=Genbank:WP_223371268.1;Name=WP_223371268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225992.1;locus_tag=LI478_RS16760;product=glycyl-radical enzyme activating protein;protein_id=WP_223371268.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3436698 3439130 . + . ID=gene-LI478_RS16765;Name=LI478_RS16765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS16765 NZ_CP085478.1 Protein Homology CDS 3436698 3439130 . + 0 ID=cds-WP_004179127.1;Parent=gene-LI478_RS16765;Dbxref=Genbank:WP_004179127.1;Name=WP_004179127.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225991.1;locus_tag=LI478_RS16765;product=formate C-acetyltransferase/glycerol dehydratase family glycyl radical enzyme;protein_id=WP_004179127.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3439307 3440122 . + . ID=gene-LI478_RS16770;Name=LI478_RS16770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS16770 NZ_CP085478.1 Protein Homology CDS 3439307 3440122 . + 0 ID=cds-WP_004191195.1;Parent=gene-LI478_RS16770;Dbxref=Genbank:WP_004191195.1;Name=WP_004191195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225990.1;locus_tag=LI478_RS16770;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_004191195.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3440262 3441527 . + . ID=gene-LI478_RS16775;Name=LI478_RS16775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS16775 NZ_CP085478.1 Protein Homology CDS 3440262 3441527 . + 0 ID=cds-WP_004176744.1;Parent=gene-LI478_RS16775;Dbxref=Genbank:WP_004176744.1;Name=WP_004176744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225989.1;locus_tag=LI478_RS16775;product=DUF1479 domain-containing protein;protein_id=WP_004176744.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3441524 3442654 . - . ID=gene-LI478_RS16780;Name=LI478_RS16780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS16780 NZ_CP085478.1 Protein Homology CDS 3441524 3442654 . - 0 ID=cds-WP_004219745.1;Parent=gene-LI478_RS16780;Dbxref=Genbank:WP_004219745.1;Name=WP_004219745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225988.1;locus_tag=LI478_RS16780;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_004219745.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3442898 3444199 . + . ID=gene-LI478_RS16785;Name=LI478_RS16785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS16785 NZ_CP085478.1 Protein Homology CDS 3442898 3444199 . + 0 ID=cds-WP_002895884.1;Parent=gene-LI478_RS16785;Dbxref=Genbank:WP_002895884.1;Name=WP_002895884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225987.1;locus_tag=LI478_RS16785;product=MFS transporter;protein_id=WP_002895884.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3444215 3446578 . + . ID=gene-LI478_RS16790;Name=LI478_RS16790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS16790 NZ_CP085478.1 Protein Homology CDS 3444215 3446578 . + 0 ID=cds-WP_064153587.1;Parent=gene-LI478_RS16790;Dbxref=Genbank:WP_064153587.1;Name=WP_064153587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225986.1;locus_tag=LI478_RS16790;product=glycoside hydrolase family 31 protein;protein_id=WP_064153587.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3446734 3448326 . - . ID=gene-LI478_RS16795;Name=LI478_RS16795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS16795 NZ_CP085478.1 Protein Homology CDS 3446734 3448326 . - 0 ID=cds-WP_002895876.1;Parent=gene-LI478_RS16795;Dbxref=Genbank:WP_002895876.1;Name=WP_002895876.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308924.1;locus_tag=LI478_RS16795;product=ABC-F family ATPase;protein_id=WP_002895876.1;transl_table=11 NZ_CP085478.1 RefSeq pseudogene 3448375 3449290 . + . ID=gene-LI478_RS16800;Name=LI478_RS16800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS16800;pseudo=true NZ_CP085478.1 Protein Homology CDS 3448375 3449290 . + 0 ID=cds-LI478_RS16800;Parent=gene-LI478_RS16800;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225984.1;locus_tag=LI478_RS16800;product=tyrosine-protein phosphatase;pseudo=true;transl_table=11 NZ_CP085478.1 RefSeq gene 3449491 3450405 . + . ID=gene-LI478_RS16805;Name=ldtB;gbkey=Gene;gene=ldtB;gene_biotype=protein_coding;locus_tag=LI478_RS16805 NZ_CP085478.1 Protein Homology CDS 3449491 3450405 . + 0 ID=cds-WP_002895871.1;Parent=gene-LI478_RS16805;Dbxref=Genbank:WP_002895871.1;Name=WP_002895871.1;gbkey=CDS;gene=ldtB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001369247.1;locus_tag=LI478_RS16805;product=L%2CD-transpeptidase;protein_id=WP_002895871.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3450552 3451268 . - . ID=gene-LI478_RS16810;Name=LI478_RS16810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS16810 NZ_CP085478.1 Protein Homology CDS 3450552 3451268 . - 0 ID=cds-WP_004151705.1;Parent=gene-LI478_RS16810;Dbxref=Genbank:WP_004151705.1;Name=WP_004151705.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225982.1;locus_tag=LI478_RS16810;product=GntR family transcriptional regulator;protein_id=WP_004151705.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3451337 3452713 . - . ID=gene-LI478_RS16815;Name=LI478_RS16815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS16815 NZ_CP085478.1 Protein Homology CDS 3451337 3452713 . - 0 ID=cds-WP_032438608.1;Parent=gene-LI478_RS16815;Dbxref=Genbank:WP_032438608.1;Name=WP_032438608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225981.1;locus_tag=LI478_RS16815;product=glycoside hydrolase family 1 protein;protein_id=WP_032438608.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3452883 3453995 . - . ID=gene-LI478_RS16820;Name=LI478_RS16820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS16820 NZ_CP085478.1 Protein Homology CDS 3452883 3453995 . - 0 ID=cds-WP_002895863.1;Parent=gene-LI478_RS16820;Dbxref=Genbank:WP_002895863.1;Name=WP_002895863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225980.1;locus_tag=LI478_RS16820;product=anion transporter;protein_id=WP_002895863.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3453992 3454465 . - . ID=gene-LI478_RS16825;Name=mntR;gbkey=Gene;gene=mntR;gene_biotype=protein_coding;locus_tag=LI478_RS16825 NZ_CP085478.1 Protein Homology CDS 3453992 3454465 . - 0 ID=cds-WP_004176765.1;Parent=gene-LI478_RS16825;Dbxref=Genbank:WP_004176765.1;Name=WP_004176765.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0046914,GO:0046983;gbkey=CDS;gene=mntR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,transition metal ion binding|0046914||IEA,protein dimerization activity|0046983||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225979.1;locus_tag=LI478_RS16825;product=manganese-binding transcriptional regulator MntR;protein_id=WP_004176765.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3454651 3454776 . + . ID=gene-LI478_RS16830;Name=mntS;gbkey=Gene;gene=mntS;gene_biotype=protein_coding;locus_tag=LI478_RS16830 NZ_CP085478.1 Protein Homology CDS 3454651 3454776 . + 0 ID=cds-WP_002895851.1;Parent=gene-LI478_RS16830;Dbxref=Genbank:WP_002895851.1;Name=WP_002895851.1;gbkey=CDS;gene=mntS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225978.1;locus_tag=LI478_RS16830;product=manganase accumulation protein MntS;protein_id=WP_002895851.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3455045 3456625 . + . ID=gene-LI478_RS16835;Name=LI478_RS16835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS16835 NZ_CP085478.1 Protein Homology CDS 3455045 3456625 . + 0 ID=cds-WP_064153585.1;Parent=gene-LI478_RS16835;Dbxref=Genbank:WP_064153585.1;Name=WP_064153585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225977.1;locus_tag=LI478_RS16835;product=phosphoethanolamine transferase;protein_id=WP_064153585.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3456715 3457227 . - . ID=gene-LI478_RS16840;Name=ompX;gbkey=Gene;gene=ompX;gene_biotype=protein_coding;locus_tag=LI478_RS16840 NZ_CP085478.1 Protein Homology CDS 3456715 3457227 . - 0 ID=cds-WP_002895845.1;Parent=gene-LI478_RS16840;Dbxref=Genbank:WP_002895845.1;Name=WP_002895845.1;gbkey=CDS;gene=ompX;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225976.1;locus_tag=LI478_RS16840;product=outer membrane protein OmpX;protein_id=WP_002895845.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3457579 3458466 . + . ID=gene-LI478_RS16845;Name=rhtA;gbkey=Gene;gene=rhtA;gene_biotype=protein_coding;locus_tag=LI478_RS16845 NZ_CP085478.1 Protein Homology CDS 3457579 3458466 . + 0 ID=cds-WP_002895842.1;Parent=gene-LI478_RS16845;Dbxref=Genbank:WP_002895842.1;Name=WP_002895842.1;gbkey=CDS;gene=rhtA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225974.1;locus_tag=LI478_RS16845;product=threonine/homoserine exporter RhtA;protein_id=WP_002895842.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3458704 3459207 . + . ID=gene-LI478_RS16850;Name=dps;gbkey=Gene;gene=dps;gene_biotype=protein_coding;gene_synonym=pexB;locus_tag=LI478_RS16850 NZ_CP085478.1 Protein Homology CDS 3458704 3459207 . + 0 ID=cds-WP_002895841.1;Parent=gene-LI478_RS16850;Dbxref=Genbank:WP_002895841.1;Name=WP_002895841.1;Ontology_term=GO:0016722;gbkey=CDS;gene=dps;go_function=oxidoreductase activity%2C acting on metal ions|0016722||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225973.1;locus_tag=LI478_RS16850;product=DNA starvation/stationary phase protection protein Dps;protein_id=WP_002895841.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3459616 3460362 . + . ID=gene-LI478_RS16855;Name=glnH;gbkey=Gene;gene=glnH;gene_biotype=protein_coding;locus_tag=LI478_RS16855 NZ_CP085478.1 Protein Homology CDS 3459616 3460362 . + 0 ID=cds-WP_002895839.1;Parent=gene-LI478_RS16855;Dbxref=Genbank:WP_002895839.1;Name=WP_002895839.1;Ontology_term=GO:0015276,GO:0016020;gbkey=CDS;gene=glnH;go_component=membrane|0016020||IEA;go_function=ligand-gated ion channel activity|0015276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123681.1;locus_tag=LI478_RS16855;product=glutamine ABC transporter substrate-binding protein GlnH;protein_id=WP_002895839.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3460488 3461147 . + . ID=gene-LI478_RS16860;Name=glnP;gbkey=Gene;gene=glnP;gene_biotype=protein_coding;locus_tag=LI478_RS16860 NZ_CP085478.1 Protein Homology CDS 3460488 3461147 . + 0 ID=cds-WP_002895837.1;Parent=gene-LI478_RS16860;Dbxref=Genbank:WP_002895837.1;Name=WP_002895837.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=glnP;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015367581.1;locus_tag=LI478_RS16860;product=glutamine ABC transporter permease GlnP;protein_id=WP_002895837.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3461144 3461866 . + . ID=gene-LI478_RS16865;Name=glnQ;gbkey=Gene;gene=glnQ;gene_biotype=protein_coding;locus_tag=LI478_RS16865 NZ_CP085478.1 Protein Homology CDS 3461144 3461866 . + 0 ID=cds-WP_004142040.1;Parent=gene-LI478_RS16865;Dbxref=Genbank:WP_004142040.1;Name=WP_004142040.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424;gbkey=CDS;gene=glnQ;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000569103.1;locus_tag=LI478_RS16865;product=glutamine ABC transporter ATP-binding protein GlnQ;protein_id=WP_004142040.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3461978 3464173 . + . ID=gene-LI478_RS16870;Name=ybiO;gbkey=Gene;gene=ybiO;gene_biotype=protein_coding;locus_tag=LI478_RS16870 NZ_CP085478.1 Protein Homology CDS 3461978 3464173 . + 0 ID=cds-WP_032431638.1;Parent=gene-LI478_RS16870;Dbxref=Genbank:WP_032431638.1;Name=WP_032431638.1;Ontology_term=GO:0055085;gbkey=CDS;gene=ybiO;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225969.1;locus_tag=LI478_RS16870;product=mechanosensitive channel protein;protein_id=WP_032431638.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3464176 3465090 . - . ID=gene-LI478_RS16875;Name=rlmF;gbkey=Gene;gene=rlmF;gene_biotype=protein_coding;locus_tag=LI478_RS16875 NZ_CP085478.1 Protein Homology CDS 3464176 3465090 . - 0 ID=cds-WP_032431637.1;Parent=gene-LI478_RS16875;Dbxref=Genbank:WP_032431637.1;Name=WP_032431637.1;Ontology_term=GO:0006364,GO:0008988;gbkey=CDS;gene=rlmF;go_function=rRNA (adenine-N6-)-methyltransferase activity|0008988||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004183486.1;locus_tag=LI478_RS16875;product=23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF;protein_id=WP_032431637.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3465187 3465801 . + . ID=gene-LI478_RS16880;Name=LI478_RS16880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS16880 NZ_CP085478.1 Protein Homology CDS 3465187 3465801 . + 0 ID=cds-WP_002895828.1;Parent=gene-LI478_RS16880;Dbxref=Genbank:WP_002895828.1;Name=WP_002895828.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225966.1;locus_tag=LI478_RS16880;product=flavin reductase family protein;protein_id=WP_002895828.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3465941 3466201 . + . ID=gene-LI478_RS16885;Name=LI478_RS16885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS16885 NZ_CP085478.1 Protein Homology CDS 3465941 3466201 . + 0 ID=cds-WP_004176771.1;Parent=gene-LI478_RS16885;Dbxref=Genbank:WP_004176771.1;Name=WP_004176771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225965.1;locus_tag=LI478_RS16885;product=DUF1471 domain-containing protein;protein_id=WP_004176771.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3466222 3466488 . + . ID=gene-LI478_RS16890;Name=LI478_RS16890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS16890 NZ_CP085478.1 Protein Homology CDS 3466222 3466488 . + 0 ID=cds-WP_002895824.1;Parent=gene-LI478_RS16890;Dbxref=Genbank:WP_002895824.1;Name=WP_002895824.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225964.1;locus_tag=LI478_RS16890;product=DksA/TraR family C4-type zinc finger protein;protein_id=WP_002895824.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3466774 3467034 . + . ID=gene-LI478_RS16895;Name=ybiJ;gbkey=Gene;gene=ybiJ;gene_biotype=protein_coding;locus_tag=LI478_RS16895 NZ_CP085478.1 Protein Homology CDS 3466774 3467034 . + 0 ID=cds-WP_004176772.1;Parent=gene-LI478_RS16895;Dbxref=Genbank:WP_004176772.1;Name=WP_004176772.1;gbkey=CDS;gene=ybiJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225963.1;locus_tag=LI478_RS16895;product=DUF1471 family protein YbiJ;protein_id=WP_004176772.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3467144 3468112 . - . ID=gene-LI478_RS16900;Name=ybiB;gbkey=Gene;gene=ybiB;gene_biotype=protein_coding;locus_tag=LI478_RS16900 NZ_CP085478.1 Protein Homology CDS 3467144 3468112 . - 0 ID=cds-WP_004179105.1;Parent=gene-LI478_RS16900;Dbxref=Genbank:WP_004179105.1;Name=WP_004179105.1;gbkey=CDS;gene=ybiB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225962.1;locus_tag=LI478_RS16900;product=DNA-binding protein YbiB;protein_id=WP_004179105.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3468142 3470310 . - . ID=gene-LI478_RS16905;Name=dinG;gbkey=Gene;gene=dinG;gene_biotype=protein_coding;locus_tag=LI478_RS16905 NZ_CP085478.1 Protein Homology CDS 3468142 3470310 . - 0 ID=cds-WP_004176775.1;Parent=gene-LI478_RS16905;Dbxref=Genbank:WP_004176775.1;Name=WP_004176775.1;Ontology_term=GO:0006139,GO:0003677,GO:0003678,GO:0005524,GO:0016818;gbkey=CDS;gene=dinG;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225961.1;locus_tag=LI478_RS16905;product=ATP-dependent DNA helicase DinG;protein_id=WP_004176775.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3470498 3471853 . - . ID=gene-LI478_RS16910;Name=rhlE;gbkey=Gene;gene=rhlE;gene_biotype=protein_coding;locus_tag=LI478_RS16910 NZ_CP085478.1 Protein Homology CDS 3470498 3471853 . - 0 ID=cds-WP_004151702.1;Parent=gene-LI478_RS16910;Dbxref=Genbank:WP_004151702.1;Name=WP_004151702.1;Ontology_term=GO:0003724;gbkey=CDS;gene=rhlE;go_function=RNA helicase activity|0003724||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225960.1;locus_tag=LI478_RS16910;product=ATP-dependent RNA helicase RhlE;protein_id=WP_004151702.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3472068 3473060 . - . ID=gene-LI478_RS16915;Name=LI478_RS16915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS16915 NZ_CP085478.1 Protein Homology CDS 3472068 3473060 . - 0 ID=cds-WP_002895757.1;Parent=gene-LI478_RS16915;Dbxref=Genbank:WP_002895757.1;Name=WP_002895757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004183482.1;locus_tag=LI478_RS16915;product=transketolase family protein;protein_id=WP_002895757.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3473060 3473905 . - . ID=gene-LI478_RS16920;Name=LI478_RS16920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS16920 NZ_CP085478.1 Protein Homology CDS 3473060 3473905 . - 0 ID=cds-WP_002895753.1;Parent=gene-LI478_RS16920;Dbxref=Genbank:WP_002895753.1;Name=WP_002895753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225957.1;locus_tag=LI478_RS16920;product=transketolase;protein_id=WP_002895753.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3473919 3474668 . - . ID=gene-LI478_RS16925;Name=LI478_RS16925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS16925 NZ_CP085478.1 Protein Homology CDS 3473919 3474668 . - 0 ID=cds-WP_048333020.1;Parent=gene-LI478_RS16925;Dbxref=Genbank:WP_048333020.1;Name=WP_048333020.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225956.1;locus_tag=LI478_RS16925;product=glucose 1-dehydrogenase;protein_id=WP_048333020.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3474719 3476050 . - . ID=gene-LI478_RS16930;Name=LI478_RS16930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS16930 NZ_CP085478.1 Protein Homology CDS 3474719 3476050 . - 0 ID=cds-WP_019705008.1;Parent=gene-LI478_RS16930;Dbxref=Genbank:WP_019705008.1;Name=WP_019705008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225955.1;locus_tag=LI478_RS16930;product=MFS transporter;protein_id=WP_019705008.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3476338 3476475 . - . ID=gene-LI478_RS16935;Name=LI478_RS16935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS16935 NZ_CP085478.1 Protein Homology CDS 3476338 3476475 . - 0 ID=cds-WP_004142057.1;Parent=gene-LI478_RS16935;Dbxref=Genbank:WP_004142057.1;Name=WP_004142057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225954.1;locus_tag=LI478_RS16935;product=hypothetical protein;protein_id=WP_004142057.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3476467 3477390 . + . ID=gene-LI478_RS16940;Name=LI478_RS16940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS16940 NZ_CP085478.1 Protein Homology CDS 3476467 3477390 . + 0 ID=cds-WP_004179102.1;Parent=gene-LI478_RS16940;Dbxref=Genbank:WP_004179102.1;Name=WP_004179102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225953.1;locus_tag=LI478_RS16940;product=LysR substrate-binding domain-containing protein;protein_id=WP_004179102.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3477464 3478123 . + . ID=gene-LI478_RS16945;Name=cecR;gbkey=Gene;gene=cecR;gene_biotype=protein_coding;locus_tag=LI478_RS16945 NZ_CP085478.1 Protein Homology CDS 3477464 3478123 . + 0 ID=cds-WP_032416910.1;Parent=gene-LI478_RS16945;Dbxref=Genbank:WP_032416910.1;Name=WP_032416910.1;gbkey=CDS;gene=cecR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015584847.1;locus_tag=LI478_RS16945;product=transcriptional regulator CecR;protein_id=WP_032416910.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3478123 3479118 . + . ID=gene-LI478_RS16950;Name=hlyD;gbkey=Gene;gene=hlyD;gene_biotype=protein_coding;locus_tag=LI478_RS16950 NZ_CP085478.1 Protein Homology CDS 3478123 3479118 . + 0 ID=cds-WP_032416909.1;Parent=gene-LI478_RS16950;Dbxref=Genbank:WP_032416909.1;Name=WP_032416909.1;gbkey=CDS;gene=hlyD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225950.1;locus_tag=LI478_RS16950;product=secretion protein HlyD;protein_id=WP_032416909.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3479111 3480850 . + . ID=gene-LI478_RS16955;Name=LI478_RS16955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS16955 NZ_CP085478.1 Protein Homology CDS 3479111 3480850 . + 0 ID=cds-WP_064153583.1;Parent=gene-LI478_RS16955;Dbxref=Genbank:WP_064153583.1;Name=WP_064153583.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225949.1;locus_tag=LI478_RS16955;product=ATP-binding cassette domain-containing protein;protein_id=WP_064153583.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3480840 3481973 . + . ID=gene-LI478_RS16960;Name=LI478_RS16960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS16960 NZ_CP085478.1 Protein Homology CDS 3480840 3481973 . + 0 ID=cds-WP_064153581.1;Parent=gene-LI478_RS16960;Dbxref=Genbank:WP_064153581.1;Name=WP_064153581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225948.1;locus_tag=LI478_RS16960;product=ABC transporter permease;protein_id=WP_064153581.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3482103 3483209 . + . ID=gene-LI478_RS16965;Name=LI478_RS16965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS16965 NZ_CP085478.1 Protein Homology CDS 3482103 3483209 . + 0 ID=cds-WP_048333021.1;Parent=gene-LI478_RS16965;Dbxref=Genbank:WP_048333021.1;Name=WP_048333021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225947.1;locus_tag=LI478_RS16965;product=ABC transporter permease;protein_id=WP_048333021.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3483270 3483707 . - . ID=gene-LI478_RS16970;Name=LI478_RS16970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS16970 NZ_CP085478.1 Protein Homology CDS 3483270 3483707 . - 0 ID=cds-WP_048333023.1;Parent=gene-LI478_RS16970;Dbxref=Genbank:WP_048333023.1;Name=WP_048333023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004130686.1;locus_tag=LI478_RS16970;product=membrane protein;protein_id=WP_048333023.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3483839 3484600 . + . ID=gene-LI478_RS16975;Name=LI478_RS16975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS16975 NZ_CP085478.1 Protein Homology CDS 3483839 3484600 . + 0 ID=cds-WP_004176795.1;Parent=gene-LI478_RS16975;Dbxref=Genbank:WP_004176795.1;Name=WP_004176795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225945.1;locus_tag=LI478_RS16975;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WP_004176795.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3484597 3485841 . + . ID=gene-LI478_RS16980;Name=clsB;gbkey=Gene;gene=clsB;gene_biotype=protein_coding;locus_tag=LI478_RS16980 NZ_CP085478.1 Protein Homology CDS 3484597 3485841 . + 0 ID=cds-WP_002895730.1;Parent=gene-LI478_RS16980;Dbxref=Genbank:WP_002895730.1;Name=WP_002895730.1;Ontology_term=GO:0032049,GO:0008808;gbkey=CDS;gene=clsB;go_function=cardiolipin synthase activity|0008808||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225944.1;locus_tag=LI478_RS16980;product=cardiolipin synthase ClsB;protein_id=WP_002895730.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3485838 3486803 . + . ID=gene-LI478_RS16985;Name=LI478_RS16985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS16985 NZ_CP085478.1 Protein Homology CDS 3485838 3486803 . + 0 ID=cds-WP_002895728.1;Parent=gene-LI478_RS16985;Dbxref=Genbank:WP_002895728.1;Name=WP_002895728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225943.1;locus_tag=LI478_RS16985;product=lysylphosphatidylglycerol synthase domain-containing protein;protein_id=WP_002895728.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3487208 3487912 . - . ID=gene-LI478_RS16990;Name=LI478_RS16990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS16990 NZ_CP085478.1 Protein Homology CDS 3487208 3487912 . - 0 ID=cds-WP_004142079.1;Parent=gene-LI478_RS16990;Dbxref=Genbank:WP_004142079.1;Name=WP_004142079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225942.1;locus_tag=LI478_RS16990;product=Bax inhibitor-1/YccA family protein;protein_id=WP_004142079.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3487958 3488410 . - . ID=gene-LI478_RS16995;Name=moaE;gbkey=Gene;gene=moaE;gene_biotype=protein_coding;locus_tag=LI478_RS16995 NZ_CP085478.1 Protein Homology CDS 3487958 3488410 . - 0 ID=cds-WP_002895674.1;Parent=gene-LI478_RS16995;Dbxref=Genbank:WP_002895674.1;Name=WP_002895674.1;Ontology_term=GO:0006777;gbkey=CDS;gene=moaE;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225941.1;locus_tag=LI478_RS16995;product=molybdopterin synthase catalytic subunit MoaE;protein_id=WP_002895674.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3488412 3488660 . - . ID=gene-LI478_RS17000;Name=moaD;gbkey=Gene;gene=moaD;gene_biotype=protein_coding;locus_tag=LI478_RS17000 NZ_CP085478.1 Protein Homology CDS 3488412 3488660 . - 0 ID=cds-WP_032414705.1;Parent=gene-LI478_RS17000;Dbxref=Genbank:WP_032414705.1;Name=WP_032414705.1;Ontology_term=GO:0006777;gbkey=CDS;gene=moaD;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225940.1;locus_tag=LI478_RS17000;product=molybdopterin synthase sulfur carrier subunit;protein_id=WP_032414705.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3488653 3489141 . - . ID=gene-LI478_RS17005;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=LI478_RS17005 NZ_CP085478.1 Protein Homology CDS 3488653 3489141 . - 0 ID=cds-WP_032414703.1;Parent=gene-LI478_RS17005;Dbxref=Genbank:WP_032414703.1;Name=WP_032414703.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=moaC;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225939.1;locus_tag=LI478_RS17005;product=cyclic pyranopterin monophosphate synthase MoaC;protein_id=WP_032414703.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3489145 3489657 . - . ID=gene-LI478_RS17010;Name=moaB;gbkey=Gene;gene=moaB;gene_biotype=protein_coding;locus_tag=LI478_RS17010 NZ_CP085478.1 Protein Homology CDS 3489145 3489657 . - 0 ID=cds-WP_002895668.1;Parent=gene-LI478_RS17010;Dbxref=Genbank:WP_002895668.1;Name=WP_002895668.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=moaB;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123739.1;locus_tag=LI478_RS17010;product=molybdenum cofactor biosynthesis protein B;protein_id=WP_002895668.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3489681 3490670 . - . ID=gene-LI478_RS17015;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=LI478_RS17015 NZ_CP085478.1 Protein Homology CDS 3489681 3490670 . - 0 ID=cds-WP_032415647.1;Parent=gene-LI478_RS17015;Dbxref=Genbank:WP_032415647.1;Name=WP_032415647.1;Ontology_term=GO:0006777,GO:0051539;gbkey=CDS;gene=moaA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225937.1;locus_tag=LI478_RS17015;product=GTP 3'%2C8-cyclase MoaA;protein_id=WP_032415647.1;transl_table=11 NZ_CP085478.1 cmsearch riboswitch 3490658 3490796 . - . ID=id-NZ_CP085478.1:3490658..3490796;Dbxref=RFAM:RF01055;Note=molybdenum cofactor riboswitch;bound_moiety=molybdenum cofactor;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_CP085478.1 RefSeq gene 3491005 3491910 . + . ID=gene-LI478_RS17020;Name=yvcK;gbkey=Gene;gene=yvcK;gene_biotype=protein_coding;locus_tag=LI478_RS17020 NZ_CP085478.1 Protein Homology CDS 3491005 3491910 . + 0 ID=cds-WP_004142092.1;Parent=gene-LI478_RS17020;Dbxref=Genbank:WP_004142092.1;Name=WP_004142092.1;gbkey=CDS;gene=yvcK;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225936.1;locus_tag=LI478_RS17020;product=uridine diphosphate-N-acetylglucosamine-binding protein YvcK;protein_id=WP_004142092.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3492015 3493655 . + . ID=gene-LI478_RS17025;Name=eptA;gbkey=Gene;gene=eptA;gene_biotype=protein_coding;locus_tag=LI478_RS17025 NZ_CP085478.1 Protein Homology CDS 3492015 3493655 . + 0 ID=cds-WP_032414701.1;Parent=gene-LI478_RS17025;Dbxref=Genbank:WP_032414701.1;Name=WP_032414701.1;Ontology_term=GO:0016772;gbkey=CDS;gene=eptA;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225935.1;locus_tag=LI478_RS17025;product=phosphoethanolamine transferase EptA;protein_id=WP_032414701.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3493655 3494326 . + . ID=gene-LI478_RS17030;Name=pmrA;gbkey=Gene;gene=pmrA;gene_biotype=protein_coding;locus_tag=LI478_RS17030 NZ_CP085478.1 Protein Homology CDS 3493655 3494326 . + 0 ID=cds-WP_002895659.1;Parent=gene-LI478_RS17030;Dbxref=Genbank:WP_002895659.1;Name=WP_002895659.1;gbkey=CDS;gene=pmrA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225934.1;locus_tag=LI478_RS17030;product=two-component system response regulator PmrA;protein_id=WP_002895659.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3494330 3495427 . + . ID=gene-LI478_RS17035;Name=pmrB;gbkey=Gene;gene=pmrB;gene_biotype=protein_coding;locus_tag=LI478_RS17035 NZ_CP085478.1 Protein Homology CDS 3494330 3495427 . + 0 ID=cds-WP_004147680.1;Parent=gene-LI478_RS17035;Dbxref=Genbank:WP_004147680.1;Name=WP_004147680.1;gbkey=CDS;gene=pmrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004111547.1;locus_tag=LI478_RS17035;product=two-component system sensor histidine kinase PmrB;protein_id=WP_004147680.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3495676 3497697 . - . ID=gene-LI478_RS17040;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=LI478_RS17040 NZ_CP085478.1 Protein Homology CDS 3495676 3497697 . - 0 ID=cds-WP_004147678.1;Parent=gene-LI478_RS17040;Dbxref=Genbank:WP_004147678.1;Name=WP_004147678.1;Ontology_term=GO:0006289,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrB;go_component=excinuclease repair complex|0009380||IEA;go_function=excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123745.1;locus_tag=LI478_RS17040;product=excinuclease ABC subunit UvrB;protein_id=WP_004147678.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3498109 3498321 . + . ID=gene-LI478_RS17045;Name=LI478_RS17045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS17045 NZ_CP085478.1 Protein Homology CDS 3498109 3498321 . + 0 ID=cds-WP_002895652.1;Parent=gene-LI478_RS17045;Dbxref=Genbank:WP_002895652.1;Name=WP_002895652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225931.1;locus_tag=LI478_RS17045;product=hypothetical protein;protein_id=WP_002895652.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3498408 3499130 . + . ID=gene-LI478_RS17050;Name=LI478_RS17050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS17050 NZ_CP085478.1 Protein Homology CDS 3498408 3499130 . + 0 ID=cds-WP_004152853.1;Parent=gene-LI478_RS17050;Dbxref=Genbank:WP_004152853.1;Name=WP_004152853.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017900923.1;locus_tag=LI478_RS17050;product=ATP-binding cassette domain-containing protein;protein_id=WP_004152853.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3499072 3499794 . - . ID=gene-LI478_RS17055;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=LI478_RS17055 NZ_CP085478.1 Protein Homology CDS 3499072 3499794 . - 0 ID=cds-WP_002895648.1;Parent=gene-LI478_RS17055;Dbxref=Genbank:WP_002895648.1;Name=WP_002895648.1;Ontology_term=GO:0009102,GO:0004141;gbkey=CDS;gene=bioD;go_function=dethiobiotin synthase activity|0004141||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225930.1;locus_tag=LI478_RS17055;product=dethiobiotin synthase;protein_id=WP_002895648.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3499787 3500542 . - . ID=gene-LI478_RS17060;Name=bioC;gbkey=Gene;gene=bioC;gene_biotype=protein_coding;locus_tag=LI478_RS17060 NZ_CP085478.1 Protein Homology CDS 3499787 3500542 . - 0 ID=cds-WP_004142100.1;Parent=gene-LI478_RS17060;Dbxref=Genbank:WP_004142100.1;Name=WP_004142100.1;Ontology_term=GO:0009102,GO:0010340;gbkey=CDS;gene=bioC;go_function=carboxyl-O-methyltransferase activity|0010340||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225929.1;locus_tag=LI478_RS17060;product=malonyl-ACP O-methyltransferase BioC;protein_id=WP_004142100.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3500526 3501683 . - . ID=gene-LI478_RS17065;Name=bioF;gbkey=Gene;gene=bioF;gene_biotype=protein_coding;locus_tag=LI478_RS17065 NZ_CP085478.1 Protein Homology CDS 3500526 3501683 . - 0 ID=cds-WP_004176804.1;Parent=gene-LI478_RS17065;Dbxref=Genbank:WP_004176804.1;Name=WP_004176804.1;Ontology_term=GO:0009102,GO:0008710;gbkey=CDS;gene=bioF;go_function=8-amino-7-oxononanoate synthase activity|0008710||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225928.1;locus_tag=LI478_RS17065;product=8-amino-7-oxononanoate synthase;protein_id=WP_004176804.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3501680 3502720 . - . ID=gene-LI478_RS17070;Name=bioB;gbkey=Gene;gene=bioB;gene_biotype=protein_coding;locus_tag=LI478_RS17070 NZ_CP085478.1 Protein Homology CDS 3501680 3502720 . - 0 ID=cds-WP_002895580.1;Parent=gene-LI478_RS17070;Dbxref=Genbank:WP_002895580.1;Name=WP_002895580.1;Ontology_term=GO:0009102,GO:0004076,GO:0051537,GO:0051539,GO:1904047;gbkey=CDS;gene=bioB;go_function=biotin synthase activity|0004076||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415296.1;locus_tag=LI478_RS17070;product=biotin synthase BioB;protein_id=WP_002895580.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3502934 3504223 . + . ID=gene-LI478_RS17075;Name=bioA;gbkey=Gene;gene=bioA;gene_biotype=protein_coding;locus_tag=LI478_RS17075 NZ_CP085478.1 Protein Homology CDS 3502934 3504223 . + 0 ID=cds-WP_004176805.1;Parent=gene-LI478_RS17075;Dbxref=Genbank:WP_004176805.1;Name=WP_004176805.1;Ontology_term=GO:0009102,GO:0004015,GO:0030170;gbkey=CDS;gene=bioA;go_function=adenosylmethionine-8-amino-7-oxononanoate transaminase activity|0004015||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225926.1;locus_tag=LI478_RS17075;product=adenosylmethionine--8-amino-7-oxononanoate transaminase;protein_id=WP_004176805.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3504294 3504770 . + . ID=gene-LI478_RS17080;Name=LI478_RS17080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS17080 NZ_CP085478.1 Protein Homology CDS 3504294 3504770 . + 0 ID=cds-WP_002895575.1;Parent=gene-LI478_RS17080;Dbxref=Genbank:WP_002895575.1;Name=WP_002895575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225925.1;locus_tag=LI478_RS17080;product=kinase inhibitor;protein_id=WP_002895575.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3505549 3506931 . - . ID=gene-LI478_RS17085;Name=LI478_RS17085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS17085 NZ_CP085478.1 Protein Homology CDS 3505549 3506931 . - 0 ID=cds-WP_004176814.1;Parent=gene-LI478_RS17085;Dbxref=Genbank:WP_004176814.1;Name=WP_004176814.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225924.1;locus_tag=LI478_RS17085;product=amino acid permease;protein_id=WP_004176814.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3507030 3508556 . - . ID=gene-LI478_RS17090;Name=hutH;gbkey=Gene;gene=hutH;gene_biotype=protein_coding;locus_tag=LI478_RS17090 NZ_CP085478.1 Protein Homology CDS 3507030 3508556 . - 0 ID=cds-WP_002895420.1;Parent=gene-LI478_RS17090;Dbxref=Genbank:WP_002895420.1;Name=WP_002895420.1;Ontology_term=GO:0006548,GO:0004397;gbkey=CDS;gene=hutH;go_function=histidine ammonia-lyase activity|0004397||IEA;go_process=histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225923.1;locus_tag=LI478_RS17090;product=histidine ammonia-lyase;protein_id=WP_002895420.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3508553 3510241 . - . ID=gene-LI478_RS17095;Name=hutU;gbkey=Gene;gene=hutU;gene_biotype=protein_coding;locus_tag=LI478_RS17095 NZ_CP085478.1 Protein Homology CDS 3508553 3510241 . - 0 ID=cds-WP_004151699.1;Parent=gene-LI478_RS17095;Dbxref=Genbank:WP_004151699.1;Name=WP_004151699.1;Ontology_term=GO:0006548,GO:0016153;gbkey=CDS;gene=hutU;go_function=urocanate hydratase activity|0016153||IEA;go_process=histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015367623.1;locus_tag=LI478_RS17095;product=urocanate hydratase;protein_id=WP_004151699.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3510384 3511109 . - . ID=gene-LI478_RS17100;Name=LI478_RS17100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS17100 NZ_CP085478.1 Protein Homology CDS 3510384 3511109 . - 0 ID=cds-WP_002895358.1;Parent=gene-LI478_RS17100;Dbxref=Genbank:WP_002895358.1;Name=WP_002895358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225920.1;locus_tag=LI478_RS17100;product=histidine utilization repressor;protein_id=WP_002895358.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3511171 3512127 . - . ID=gene-LI478_RS17105;Name=hutG;gbkey=Gene;gene=hutG;gene_biotype=protein_coding;locus_tag=LI478_RS17105 NZ_CP085478.1 Protein Homology CDS 3511171 3512127 . - 0 ID=cds-WP_032414694.1;Parent=gene-LI478_RS17105;Dbxref=Genbank:WP_032414694.1;Name=WP_032414694.1;Ontology_term=GO:0019556,GO:0050415;gbkey=CDS;gene=hutG;go_function=formimidoylglutamase activity|0050415||IEA;go_process=histidine catabolic process to glutamate and formamide|0019556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225919.1;locus_tag=LI478_RS17105;product=formimidoylglutamase;protein_id=WP_032414694.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3512124 3513443 . - . ID=gene-LI478_RS17110;Name=hutI;gbkey=Gene;gene=hutI;gene_biotype=protein_coding;locus_tag=LI478_RS17110 NZ_CP085478.1 Protein Homology CDS 3512124 3513443 . - 0 ID=cds-WP_004182478.1;Parent=gene-LI478_RS17110;Dbxref=Genbank:WP_004182478.1;Name=WP_004182478.1;Ontology_term=GO:0006548,GO:0050480;gbkey=CDS;gene=hutI;go_function=imidazolonepropionase activity|0050480||IEA;go_process=histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225918.1;locus_tag=LI478_RS17110;product=imidazolonepropionase;protein_id=WP_004182478.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3513598 3514881 . + . ID=gene-LI478_RS17115;Name=LI478_RS17115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS17115 NZ_CP085478.1 Protein Homology CDS 3513598 3514881 . + 0 ID=cds-WP_004142122.1;Parent=gene-LI478_RS17115;Dbxref=Genbank:WP_004142122.1;Name=WP_004142122.1;Ontology_term=GO:0042545,GO:0030599;gbkey=CDS;go_function=pectinesterase activity|0030599||IEA;go_process=cell wall modification|0042545||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225917.1;locus_tag=LI478_RS17115;product=putative acyl-CoA thioester hydrolase;protein_id=WP_004142122.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3515154 3517841 . - . ID=gene-LI478_RS17120;Name=LI478_RS17120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS17120 NZ_CP085478.1 Protein Homology CDS 3515154 3517841 . - 0 ID=cds-WP_023284866.1;Parent=gene-LI478_RS17120;Dbxref=Genbank:WP_023284866.1;Name=WP_023284866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004122206.1;locus_tag=LI478_RS17120;product=cation-transporting P-type ATPase;protein_id=WP_023284866.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3517893 3518324 . - . ID=gene-LI478_RS17125;Name=LI478_RS17125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS17125 NZ_CP085478.1 Protein Homology CDS 3517893 3518324 . - 0 ID=cds-WP_004183465.1;Parent=gene-LI478_RS17125;Dbxref=Genbank:WP_004183465.1;Name=WP_004183465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019705952.1;locus_tag=LI478_RS17125;product=universal stress protein;protein_id=WP_004183465.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3518858 3519943 . + . ID=gene-LI478_RS17130;Name=LI478_RS17130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS17130 NZ_CP085478.1 Protein Homology CDS 3518858 3519943 . + 0 ID=cds-WP_004147662.1;Parent=gene-LI478_RS17130;Dbxref=Genbank:WP_004147662.1;Name=WP_004147662.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004223727.1;locus_tag=LI478_RS17130;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_004147662.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3519944 3523009 . + . ID=gene-LI478_RS17135;Name=LI478_RS17135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS17135 NZ_CP085478.1 Protein Homology CDS 3519944 3523009 . + 0 ID=cds-WP_102007280.1;Parent=gene-LI478_RS17135;Dbxref=Genbank:WP_102007280.1;Name=WP_102007280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019705951.1;locus_tag=LI478_RS17135;product=efflux RND transporter permease subunit;protein_id=WP_102007280.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3523048 3523971 . + . ID=gene-LI478_RS17140;Name=LI478_RS17140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS17140 NZ_CP085478.1 Protein Homology CDS 3523048 3523971 . + 0 ID=cds-WP_002895284.1;Parent=gene-LI478_RS17140;Dbxref=Genbank:WP_002895284.1;Name=WP_002895284.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225915.1;locus_tag=LI478_RS17140;product=acyltransferase family protein;protein_id=WP_002895284.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3523988 3524494 . - . ID=gene-LI478_RS17145;Name=LI478_RS17145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS17145 NZ_CP085478.1 Protein Homology CDS 3523988 3524494 . - 0 ID=cds-WP_002895283.1;Parent=gene-LI478_RS17145;Dbxref=Genbank:WP_002895283.1;Name=WP_002895283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225914.1;locus_tag=LI478_RS17145;product=hypothetical protein;protein_id=WP_002895283.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3524699 3524845 . - . ID=gene-LI478_RS17150;Name=LI478_RS17150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS17150 NZ_CP085478.1 Protein Homology CDS 3524699 3524845 . - 0 ID=cds-WP_009483834.1;Parent=gene-LI478_RS17150;Dbxref=Genbank:WP_009483834.1;Name=WP_009483834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225913.1;locus_tag=LI478_RS17150;product=hypothetical protein;protein_id=WP_009483834.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3525230 3525442 . + . ID=gene-LI478_RS17155;Name=LI478_RS17155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS17155 NZ_CP085478.1 Protein Homology CDS 3525230 3525442 . + 0 ID=cds-WP_002895280.1;Parent=gene-LI478_RS17155;Dbxref=Genbank:WP_002895280.1;Name=WP_002895280.1;Ontology_term=GO:0071468;gbkey=CDS;go_process=cellular response to acidic pH|0071468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225912.1;locus_tag=LI478_RS17155;product=biofilm development regulator YmgB/AriR family protein;protein_id=WP_002895280.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3525524 3526078 . + . ID=gene-LI478_RS17160;Name=LI478_RS17160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS17160 NZ_CP085478.1 Protein Homology CDS 3525524 3526078 . + 0 ID=cds-WP_004151695.1;Parent=gene-LI478_RS17160;Dbxref=Genbank:WP_004151695.1;Name=WP_004151695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225911.1;locus_tag=LI478_RS17160;product=helix-turn-helix transcriptional regulator;protein_id=WP_004151695.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3526120 3526854 . - . ID=gene-LI478_RS17165;Name=LI478_RS17165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS17165 NZ_CP085478.1 Protein Homology CDS 3526120 3526854 . - 0 ID=cds-WP_004176830.1;Parent=gene-LI478_RS17165;Dbxref=Genbank:WP_004176830.1;Name=WP_004176830.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225910.1;locus_tag=LI478_RS17165;product=MerR family transcriptional regulator;protein_id=WP_004176830.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3527010 3528221 . - . ID=gene-LI478_RS17170;Name=LI478_RS17170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS17170 NZ_CP085478.1 Protein Homology CDS 3527010 3528221 . - 0 ID=cds-WP_004176831.1;Parent=gene-LI478_RS17170;Dbxref=Genbank:WP_004176831.1;Name=WP_004176831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225909.1;locus_tag=LI478_RS17170;product=diguanylate phosphodiesterase;protein_id=WP_004176831.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3528551 3528796 . + . ID=gene-LI478_RS17175;Name=ycgZ;gbkey=Gene;gene=ycgZ;gene_biotype=protein_coding;locus_tag=LI478_RS17175 NZ_CP085478.1 Protein Homology CDS 3528551 3528796 . + 0 ID=cds-WP_004151693.1;Parent=gene-LI478_RS17175;Dbxref=Genbank:WP_004151693.1;Name=WP_004151693.1;gbkey=CDS;gene=ycgZ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225908.1;locus_tag=LI478_RS17175;product=regulatory protein YcgZ;protein_id=WP_004151693.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3528924 3529229 . + . ID=gene-LI478_RS17180;Name=LI478_RS17180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS17180 NZ_CP085478.1 Protein Homology CDS 3528924 3529229 . + 0 ID=cds-WP_004147654.1;Parent=gene-LI478_RS17180;Dbxref=Genbank:WP_004147654.1;Name=WP_004147654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004147654.1;locus_tag=LI478_RS17180;product=hypothetical protein;protein_id=WP_004147654.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3529281 3529547 . + . ID=gene-LI478_RS17185;Name=LI478_RS17185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS17185 NZ_CP085478.1 Protein Homology CDS 3529281 3529547 . + 0 ID=cds-WP_227394147.1;Parent=gene-LI478_RS17185;Dbxref=Genbank:WP_227394147.1;Name=WP_227394147.1;Ontology_term=GO:0071468;gbkey=CDS;go_process=cellular response to acidic pH|0071468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225906.1;locus_tag=LI478_RS17185;product=biofilm development regulator YmgB/AriR family protein;protein_id=WP_227394147.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3529658 3530653 . - . ID=gene-LI478_RS17190;Name=pgl;gbkey=Gene;gene=pgl;gene_biotype=protein_coding;locus_tag=LI478_RS17190 NZ_CP085478.1 Protein Homology CDS 3529658 3530653 . - 0 ID=cds-WP_004183458.1;Parent=gene-LI478_RS17190;Dbxref=Genbank:WP_004183458.1;Name=WP_004183458.1;Ontology_term=GO:0017057;gbkey=CDS;gene=pgl;go_function=6-phosphogluconolactonase activity|0017057||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225905.1;locus_tag=LI478_RS17190;product=6-phosphogluconolactonase;protein_id=WP_004183458.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3530882 3531700 . + . ID=gene-LI478_RS17195;Name=LI478_RS17195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS17195 NZ_CP085478.1 Protein Homology CDS 3530882 3531700 . + 0 ID=cds-WP_004223715.1;Parent=gene-LI478_RS17195;Dbxref=Genbank:WP_004223715.1;Name=WP_004223715.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225904.1;locus_tag=LI478_RS17195;product=pyridoxal phosphatase;protein_id=WP_004223715.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3531701 3532759 . - . ID=gene-LI478_RS17200;Name=modC;gbkey=Gene;gene=modC;gene_biotype=protein_coding;locus_tag=LI478_RS17200 NZ_CP085478.1 Protein Homology CDS 3531701 3532759 . - 0 ID=cds-WP_004176832.1;Parent=gene-LI478_RS17200;Dbxref=Genbank:WP_004176832.1;Name=WP_004176832.1;Ontology_term=GO:0015689,GO:0005524,GO:0015098,GO:0016020;gbkey=CDS;gene=modC;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,molybdate ion transmembrane transporter activity|0015098||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225903.1;locus_tag=LI478_RS17200;product=molybdenum ABC transporter ATP-binding protein ModC;protein_id=WP_004176832.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3532762 3533451 . - . ID=gene-LI478_RS17205;Name=modB;gbkey=Gene;gene=modB;gene_biotype=protein_coding;locus_tag=LI478_RS17205 NZ_CP085478.1 Protein Homology CDS 3532762 3533451 . - 0 ID=cds-WP_002895159.1;Parent=gene-LI478_RS17205;Dbxref=Genbank:WP_002895159.1;Name=WP_002895159.1;Ontology_term=GO:0015689,GO:0015098,GO:0016020;gbkey=CDS;gene=modB;go_component=membrane|0016020||IEA;go_function=molybdate ion transmembrane transporter activity|0015098||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225902.1;locus_tag=LI478_RS17205;product=molybdate ABC transporter permease subunit;protein_id=WP_002895159.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3533451 3534224 . - . ID=gene-LI478_RS17210;Name=modA;gbkey=Gene;gene=modA;gene_biotype=protein_coding;locus_tag=LI478_RS17210 NZ_CP085478.1 Protein Homology CDS 3533451 3534224 . - 0 ID=cds-WP_004176834.1;Parent=gene-LI478_RS17210;Dbxref=Genbank:WP_004176834.1;Name=WP_004176834.1;Ontology_term=GO:0015689;gbkey=CDS;gene=modA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225901.1;locus_tag=LI478_RS17210;product=molybdate ABC transporter substrate-binding protein;protein_id=WP_004176834.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3534366 3534515 . - . ID=gene-LI478_RS17215;Name=LI478_RS17215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS17215 NZ_CP085478.1 Protein Homology CDS 3534366 3534515 . - 0 ID=cds-WP_002895156.1;Parent=gene-LI478_RS17215;Dbxref=Genbank:WP_002895156.1;Name=WP_002895156.1;Ontology_term=GO:1990961,GO:0042910,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225900.1;locus_tag=LI478_RS17215;product=AcrZ family multidrug efflux pump-associated protein;protein_id=WP_002895156.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3534668 3535456 . + . ID=gene-LI478_RS17220;Name=modE;gbkey=Gene;gene=modE;gene_biotype=protein_coding;locus_tag=LI478_RS17220 NZ_CP085478.1 Protein Homology CDS 3534668 3535456 . + 0 ID=cds-WP_002895154.1;Parent=gene-LI478_RS17220;Dbxref=Genbank:WP_002895154.1;Name=WP_002895154.1;Ontology_term=GO:0006355,GO:0015689,GO:0003700,GO:0030151;gbkey=CDS;gene=modE;go_function=DNA-binding transcription factor activity|0003700||IEA,molybdenum ion binding|0030151||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225899.1;locus_tag=LI478_RS17220;product=molybdenum-dependent transcriptional regulator;protein_id=WP_002895154.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3535524 3536996 . + . ID=gene-LI478_RS17225;Name=modF;gbkey=Gene;gene=modF;gene_biotype=protein_coding;locus_tag=LI478_RS17225 NZ_CP085478.1 Protein Homology CDS 3535524 3536996 . + 0 ID=cds-WP_021314057.1;Parent=gene-LI478_RS17225;Dbxref=Genbank:WP_021314057.1;Name=WP_021314057.1;Ontology_term=GO:0005524;gbkey=CDS;gene=modF;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012542418.1;locus_tag=LI478_RS17225;product=molybdate ABC transporter ATP-binding protein ModF;protein_id=WP_021314057.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3537206 3538222 . + . ID=gene-LI478_RS17230;Name=galE;gbkey=Gene;gene=galE;gene_biotype=protein_coding;locus_tag=LI478_RS17230 NZ_CP085478.1 Protein Homology CDS 3537206 3538222 . + 0 ID=cds-WP_002895150.1;Parent=gene-LI478_RS17230;Dbxref=Genbank:WP_002895150.1;Name=WP_002895150.1;Ontology_term=GO:0006012,GO:0003978;gbkey=CDS;gene=galE;go_function=UDP-glucose 4-epimerase activity|0003978||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225895.1;locus_tag=LI478_RS17230;product=UDP-glucose 4-epimerase GalE;protein_id=WP_002895150.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3538232 3539278 . + . ID=gene-LI478_RS17235;Name=galT;gbkey=Gene;gene=galT;gene_biotype=protein_coding;locus_tag=LI478_RS17235 NZ_CP085478.1 Protein Homology CDS 3538232 3539278 . + 0 ID=cds-WP_002895147.1;Parent=gene-LI478_RS17235;Dbxref=Genbank:WP_002895147.1;Name=WP_002895147.1;Ontology_term=GO:0006012,GO:0008108;gbkey=CDS;gene=galT;go_function=UDP-glucose:hexose-1-phosphate uridylyltransferase activity|0008108||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225894.1;locus_tag=LI478_RS17235;product=galactose-1-phosphate uridylyltransferase;protein_id=WP_002895147.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3539281 3540429 . + . ID=gene-LI478_RS17240;Name=galK;gbkey=Gene;gene=galK;gene_biotype=protein_coding;locus_tag=LI478_RS17240 NZ_CP085478.1 Protein Homology CDS 3539281 3540429 . + 0 ID=cds-WP_004179071.1;Parent=gene-LI478_RS17240;Dbxref=Genbank:WP_004179071.1;Name=WP_004179071.1;Ontology_term=GO:0006012,GO:0046835,GO:0004335,GO:0005524;gbkey=CDS;gene=galK;go_function=galactokinase activity|0004335||IEA,ATP binding|0005524||IEA;go_process=galactose metabolic process|0006012||IEA,carbohydrate phosphorylation|0046835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001713229.1;locus_tag=LI478_RS17240;product=galactokinase;protein_id=WP_004179071.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3540423 3541466 . + . ID=gene-LI478_RS17245;Name=galM;gbkey=Gene;gene=galM;gene_biotype=protein_coding;locus_tag=LI478_RS17245 NZ_CP085478.1 Protein Homology CDS 3540423 3541466 . + 0 ID=cds-WP_032414687.1;Parent=gene-LI478_RS17245;Dbxref=Genbank:WP_032414687.1;Name=WP_032414687.1;Ontology_term=GO:0006012,GO:0004034;gbkey=CDS;gene=galM;go_function=aldose 1-epimerase activity|0004034||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225892.1;locus_tag=LI478_RS17245;product=galactose-1-epimerase;protein_id=WP_032414687.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3541758 3542510 . + . ID=gene-LI478_RS17250;Name=gpmA;gbkey=Gene;gene=gpmA;gene_biotype=protein_coding;locus_tag=LI478_RS17250 NZ_CP085478.1 Protein Homology CDS 3541758 3542510 . + 0 ID=cds-WP_002895089.1;Parent=gene-LI478_RS17250;Dbxref=Genbank:WP_002895089.1;Name=WP_002895089.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmA;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000301556.1;locus_tag=LI478_RS17250;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase;protein_id=WP_002895089.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3542583 3543635 . - . ID=gene-LI478_RS17255;Name=aroG;gbkey=Gene;gene=aroG;gene_biotype=protein_coding;locus_tag=LI478_RS17255 NZ_CP085478.1 Protein Homology CDS 3542583 3543635 . - 0 ID=cds-WP_002895086.1;Parent=gene-LI478_RS17255;Dbxref=Genbank:WP_002895086.1;Name=WP_002895086.1;gbkey=CDS;gene=aroG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001109196.1;locus_tag=LI478_RS17255;product=3-deoxy-7-phosphoheptulonate synthase AroG;protein_id=WP_002895086.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3543950 3544315 . + . ID=gene-LI478_RS17260;Name=LI478_RS17260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS17260 NZ_CP085478.1 Protein Homology CDS 3543950 3544315 . + 0 ID=cds-WP_002895084.1;Parent=gene-LI478_RS17260;Dbxref=Genbank:WP_002895084.1;Name=WP_002895084.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225889.1;locus_tag=LI478_RS17260;product=YbgS-like family protein;protein_id=WP_002895084.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3544433 3545377 . + . ID=gene-LI478_RS17265;Name=zitB;gbkey=Gene;gene=zitB;gene_biotype=protein_coding;locus_tag=LI478_RS17265 NZ_CP085478.1 Protein Homology CDS 3544433 3545377 . + 0 ID=cds-WP_004147641.1;Parent=gene-LI478_RS17265;Dbxref=Genbank:WP_004147641.1;Name=WP_004147641.1;Ontology_term=GO:0006829,GO:0055085,GO:0005385,GO:0016020;gbkey=CDS;gene=zitB;go_component=membrane|0016020||IEA;go_function=zinc ion transmembrane transporter activity|0005385||IEA;go_process=zinc ion transport|0006829||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225888.1;locus_tag=LI478_RS17265;product=CDF family zinc transporter ZitB;protein_id=WP_004147641.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3545374 3546093 . - . ID=gene-LI478_RS17270;Name=pnuC;gbkey=Gene;gene=pnuC;gene_biotype=protein_coding;locus_tag=LI478_RS17270 NZ_CP085478.1 Protein Homology CDS 3545374 3546093 . - 0 ID=cds-WP_004151689.1;Parent=gene-LI478_RS17270;Dbxref=Genbank:WP_004151689.1;Name=WP_004151689.1;Ontology_term=GO:0015890,GO:0015663,GO:0016020;gbkey=CDS;gene=pnuC;go_component=membrane|0016020||IEA;go_function=nicotinamide mononucleotide transmembrane transporter activity|0015663||IEA;go_process=nicotinamide mononucleotide transport|0015890||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004223702.1;locus_tag=LI478_RS17270;product=nicotinamide riboside transporter PnuC;protein_id=WP_004151689.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3546129 3547172 . - . ID=gene-LI478_RS17275;Name=nadA;gbkey=Gene;gene=nadA;gene_biotype=protein_coding;locus_tag=LI478_RS17275 NZ_CP085478.1 Protein Homology CDS 3546129 3547172 . - 0 ID=cds-WP_002895074.1;Parent=gene-LI478_RS17275;Dbxref=Genbank:WP_002895074.1;Name=WP_002895074.1;Ontology_term=GO:0009435,GO:0008987,GO:0051539;gbkey=CDS;gene=nadA;go_function=quinolinate synthetase A activity|0008987||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004176847.1;locus_tag=LI478_RS17275;product=quinolinate synthase NadA;protein_id=WP_002895074.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3547242 3547391 . + . ID=gene-LI478_RS17280;Name=LI478_RS17280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS17280 NZ_CP085478.1 Protein Homology CDS 3547242 3547391 . + 0 ID=cds-WP_038808505.1;Parent=gene-LI478_RS17280;Dbxref=Genbank:WP_038808505.1;Name=WP_038808505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225885.1;locus_tag=LI478_RS17280;product=hypothetical protein;protein_id=WP_038808505.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3547487 3547624 . - . ID=gene-LI478_RS17285;Name=LI478_RS17285;gbkey=Gene;gene_biotype=ncRNA;locus_tag=LI478_RS17285 NZ_CP085478.1 cmsearch ncRNA 3547487 3547624 . - . ID=rna-LI478_RS17285;Parent=gene-LI478_RS17285;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LI478_RS17285;product=RtT sRNA NZ_CP085478.1 cmsearch exon 3547487 3547624 . - . ID=exon-LI478_RS17285-1;Parent=rna-LI478_RS17285;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LI478_RS17285;product=RtT sRNA NZ_CP085478.1 RefSeq gene 3547720 3547795 . - . ID=gene-LI478_RS17290;Name=LI478_RS17290;gbkey=Gene;gene_biotype=tRNA;locus_tag=LI478_RS17290 NZ_CP085478.1 tRNAscan-SE tRNA 3547720 3547795 . - . ID=rna-LI478_RS17290;Parent=gene-LI478_RS17290;anticodon=(pos:complement(3547760..3547762));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS17290;product=tRNA-Lys NZ_CP085478.1 tRNAscan-SE exon 3547720 3547795 . - . ID=exon-LI478_RS17290-1;Parent=rna-LI478_RS17290;anticodon=(pos:complement(3547760..3547762));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS17290;product=tRNA-Lys NZ_CP085478.1 RefSeq gene 3547929 3548004 . - . ID=gene-LI478_RS17295;Name=LI478_RS17295;gbkey=Gene;gene_biotype=tRNA;locus_tag=LI478_RS17295 NZ_CP085478.1 tRNAscan-SE tRNA 3547929 3548004 . - . ID=rna-LI478_RS17295;Parent=gene-LI478_RS17295;anticodon=(pos:complement(3547969..3547971));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS17295;product=tRNA-Lys NZ_CP085478.1 tRNAscan-SE exon 3547929 3548004 . - . ID=exon-LI478_RS17295-1;Parent=rna-LI478_RS17295;anticodon=(pos:complement(3547969..3547971));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS17295;product=tRNA-Lys NZ_CP085478.1 RefSeq gene 3548151 3548226 . - . ID=gene-LI478_RS17300;Name=LI478_RS17300;gbkey=Gene;gene_biotype=tRNA;locus_tag=LI478_RS17300 NZ_CP085478.1 tRNAscan-SE tRNA 3548151 3548226 . - . ID=rna-LI478_RS17300;Parent=gene-LI478_RS17300;anticodon=(pos:complement(3548191..3548193));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS17300;product=tRNA-Lys NZ_CP085478.1 tRNAscan-SE exon 3548151 3548226 . - . ID=exon-LI478_RS17300-1;Parent=rna-LI478_RS17300;anticodon=(pos:complement(3548191..3548193));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS17300;product=tRNA-Lys NZ_CP085478.1 RefSeq gene 3548230 3548305 . - . ID=gene-LI478_RS17305;Name=LI478_RS17305;gbkey=Gene;gene_biotype=tRNA;locus_tag=LI478_RS17305 NZ_CP085478.1 tRNAscan-SE tRNA 3548230 3548305 . - . ID=rna-LI478_RS17305;Parent=gene-LI478_RS17305;anticodon=(pos:complement(3548270..3548272));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS17305;product=tRNA-Val NZ_CP085478.1 tRNAscan-SE exon 3548230 3548305 . - . ID=exon-LI478_RS17305-1;Parent=rna-LI478_RS17305;anticodon=(pos:complement(3548270..3548272));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS17305;product=tRNA-Val NZ_CP085478.1 RefSeq gene 3548455 3548530 . - . ID=gene-LI478_RS17310;Name=LI478_RS17310;gbkey=Gene;gene_biotype=tRNA;locus_tag=LI478_RS17310 NZ_CP085478.1 tRNAscan-SE tRNA 3548455 3548530 . - . ID=rna-LI478_RS17310;Parent=gene-LI478_RS17310;anticodon=(pos:complement(3548495..3548497));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS17310;product=tRNA-Lys NZ_CP085478.1 tRNAscan-SE exon 3548455 3548530 . - . ID=exon-LI478_RS17310-1;Parent=rna-LI478_RS17310;anticodon=(pos:complement(3548495..3548497));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS17310;product=tRNA-Lys NZ_CP085478.1 RefSeq gene 3548533 3548608 . - . ID=gene-LI478_RS17315;Name=LI478_RS17315;gbkey=Gene;gene_biotype=tRNA;locus_tag=LI478_RS17315 NZ_CP085478.1 tRNAscan-SE tRNA 3548533 3548608 . - . ID=rna-LI478_RS17315;Parent=gene-LI478_RS17315;anticodon=(pos:complement(3548573..3548575));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS17315;product=tRNA-Val NZ_CP085478.1 tRNAscan-SE exon 3548533 3548608 . - . ID=exon-LI478_RS17315-1;Parent=rna-LI478_RS17315;anticodon=(pos:complement(3548573..3548575));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS17315;product=tRNA-Val NZ_CP085478.1 RefSeq gene 3548734 3548809 . - . ID=gene-LI478_RS17320;Name=LI478_RS17320;gbkey=Gene;gene_biotype=tRNA;locus_tag=LI478_RS17320 NZ_CP085478.1 tRNAscan-SE tRNA 3548734 3548809 . - . ID=rna-LI478_RS17320;Parent=gene-LI478_RS17320;anticodon=(pos:complement(3548774..3548776));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS17320;product=tRNA-Lys NZ_CP085478.1 tRNAscan-SE exon 3548734 3548809 . - . ID=exon-LI478_RS17320-1;Parent=rna-LI478_RS17320;anticodon=(pos:complement(3548774..3548776));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS17320;product=tRNA-Lys NZ_CP085478.1 RefSeq gene 3548971 3549765 . - . ID=gene-LI478_RS17325;Name=cpoB;gbkey=Gene;gene=cpoB;gene_biotype=protein_coding;locus_tag=LI478_RS17325 NZ_CP085478.1 Protein Homology CDS 3548971 3549765 . - 0 ID=cds-WP_002895071.1;Parent=gene-LI478_RS17325;Dbxref=Genbank:WP_002895071.1;Name=WP_002895071.1;Ontology_term=GO:0051301,GO:0070206,GO:0005515;gbkey=CDS;gene=cpoB;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA,protein trimerization|0070206||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225884.1;locus_tag=LI478_RS17325;product=cell division protein CpoB;protein_id=WP_002895071.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3549775 3550299 . - . ID=gene-LI478_RS17330;Name=pal;gbkey=Gene;gene=pal;gene_biotype=protein_coding;locus_tag=LI478_RS17330 NZ_CP085478.1 Protein Homology CDS 3549775 3550299 . - 0 ID=cds-WP_002895068.1;Parent=gene-LI478_RS17330;Dbxref=Genbank:WP_002895068.1;Name=WP_002895068.1;gbkey=CDS;gene=pal;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225883.1;locus_tag=LI478_RS17330;product=peptidoglycan-associated lipoprotein Pal;protein_id=WP_002895068.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3550334 3551626 . - . ID=gene-LI478_RS17335;Name=tolB;gbkey=Gene;gene=tolB;gene_biotype=protein_coding;locus_tag=LI478_RS17335 NZ_CP085478.1 Protein Homology CDS 3550334 3551626 . - 0 ID=cds-WP_002895066.1;Parent=gene-LI478_RS17335;Dbxref=Genbank:WP_002895066.1;Name=WP_002895066.1;Ontology_term=GO:0006810,GO:0005215,GO:0030288;gbkey=CDS;gene=tolB;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001646851.1;locus_tag=LI478_RS17335;product=Tol-Pal system beta propeller repeat protein TolB;protein_id=WP_002895066.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3551756 3553081 . - . ID=gene-LI478_RS17340;Name=tolA;gbkey=Gene;gene=tolA;gene_biotype=protein_coding;locus_tag=LI478_RS17340 NZ_CP085478.1 Protein Homology CDS 3551756 3553081 . - 0 ID=cds-WP_004179068.1;Parent=gene-LI478_RS17340;Dbxref=Genbank:WP_004179068.1;Name=WP_004179068.1;Ontology_term=GO:0043213,GO:0019534,GO:0016020;gbkey=CDS;gene=tolA;go_component=membrane|0016020||IEA;go_function=toxin transmembrane transporter activity|0019534||IEA;go_process=bacteriocin transport|0043213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225881.1;locus_tag=LI478_RS17340;product=cell envelope integrity protein TolA;protein_id=WP_004179068.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3553181 3553609 . - . ID=gene-LI478_RS17345;Name=tolR;gbkey=Gene;gene=tolR;gene_biotype=protein_coding;locus_tag=LI478_RS17345 NZ_CP085478.1 Protein Homology CDS 3553181 3553609 . - 0 ID=cds-WP_002895061.1;Parent=gene-LI478_RS17345;Dbxref=Genbank:WP_002895061.1;Name=WP_002895061.1;gbkey=CDS;gene=tolR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965300.1;locus_tag=LI478_RS17345;product=colicin uptake protein TolR;protein_id=WP_002895061.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3553613 3554305 . - . ID=gene-LI478_RS17350;Name=tolQ;gbkey=Gene;gene=tolQ;gene_biotype=protein_coding;locus_tag=LI478_RS17350 NZ_CP085478.1 Protein Homology CDS 3553613 3554305 . - 0 ID=cds-WP_004152221.1;Parent=gene-LI478_RS17350;Dbxref=Genbank:WP_004152221.1;Name=WP_004152221.1;gbkey=CDS;gene=tolQ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225879.1;locus_tag=LI478_RS17350;product=Tol-Pal system protein TolQ;protein_id=WP_004152221.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3554302 3554706 . - . ID=gene-LI478_RS17355;Name=ybgC;gbkey=Gene;gene=ybgC;gene_biotype=protein_coding;locus_tag=LI478_RS17355 NZ_CP085478.1 Protein Homology CDS 3554302 3554706 . - 0 ID=cds-WP_002895056.1;Parent=gene-LI478_RS17355;Dbxref=Genbank:WP_002895056.1;Name=WP_002895056.1;gbkey=CDS;gene=ybgC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308798.1;locus_tag=LI478_RS17355;product=tol-pal system-associated acyl-CoA thioesterase;protein_id=WP_002895056.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3554856 3555146 . - . ID=gene-LI478_RS17360;Name=ybgE;gbkey=Gene;gene=ybgE;gene_biotype=protein_coding;locus_tag=LI478_RS17360 NZ_CP085478.1 Protein Homology CDS 3554856 3555146 . - 0 ID=cds-WP_023287382.1;Parent=gene-LI478_RS17360;Dbxref=Genbank:WP_023287382.1;Name=WP_023287382.1;gbkey=CDS;gene=ybgE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225877.1;locus_tag=LI478_RS17360;product=cyd operon protein YbgE;protein_id=WP_023287382.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3555146 3555262 . - . ID=gene-LI478_RS17365;Name=cydX;gbkey=Gene;gene=cydX;gene_biotype=protein_coding;locus_tag=LI478_RS17365 NZ_CP085478.1 Protein Homology CDS 3555146 3555262 . - 0 ID=cds-WP_002895051.1;Parent=gene-LI478_RS17365;Dbxref=Genbank:WP_002895051.1;Name=WP_002895051.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydX;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225876.1;locus_tag=LI478_RS17365;product=cytochrome bd-I oxidase subunit CydX;protein_id=WP_002895051.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3555278 3556417 . - . ID=gene-LI478_RS17370;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=LI478_RS17370 NZ_CP085478.1 Protein Homology CDS 3555278 3556417 . - 0 ID=cds-WP_002895049.1;Parent=gene-LI478_RS17370;Dbxref=Genbank:WP_002895049.1;Name=WP_002895049.1;Ontology_term=GO:0016020;gbkey=CDS;gene=cydB;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000568269.1;locus_tag=LI478_RS17370;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_002895049.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3556433 3558001 . - . ID=gene-LI478_RS17375;Name=cydA;gbkey=Gene;gene=cydA;gene_biotype=protein_coding;locus_tag=LI478_RS17375 NZ_CP085478.1 Protein Homology CDS 3556433 3558001 . - 0 ID=cds-WP_002895047.1;Parent=gene-LI478_RS17375;Dbxref=Genbank:WP_002895047.1;Name=WP_002895047.1;Ontology_term=GO:0019646,GO:0009055,GO:0070069;gbkey=CDS;gene=cydA;go_component=cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA;go_process=aerobic electron transport chain|0019646||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225874.1;locus_tag=LI478_RS17375;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_002895047.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3558825 3559694 . - . ID=gene-LI478_RS17380;Name=sucD;gbkey=Gene;gene=sucD;gene_biotype=protein_coding;locus_tag=LI478_RS17380 NZ_CP085478.1 Protein Homology CDS 3558825 3559694 . - 0 ID=cds-WP_002895043.1;Parent=gene-LI478_RS17380;Dbxref=Genbank:WP_002895043.1;Name=WP_002895043.1;Ontology_term=GO:0003824;gbkey=CDS;gene=sucD;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225872.1;locus_tag=LI478_RS17380;product=succinate--CoA ligase subunit alpha;protein_id=WP_002895043.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3559694 3560860 . - . ID=gene-LI478_RS17385;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=protein_coding;locus_tag=LI478_RS17385 NZ_CP085478.1 Protein Homology CDS 3559694 3560860 . - 0 ID=cds-WP_002895039.1;Parent=gene-LI478_RS17385;Dbxref=Genbank:WP_002895039.1;Name=WP_002895039.1;Ontology_term=GO:0006099,GO:0003824,GO:0005524,GO:0046872;gbkey=CDS;gene=sucC;go_function=catalytic activity|0003824||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133271.1;locus_tag=LI478_RS17385;product=ADP-forming succinate--CoA ligase subunit beta;protein_id=WP_002895039.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3560964 3562190 . - . ID=gene-LI478_RS17390;Name=odhB;gbkey=Gene;gene=odhB;gene_biotype=protein_coding;locus_tag=LI478_RS17390 NZ_CP085478.1 Protein Homology CDS 3560964 3562190 . - 0 ID=cds-WP_009484141.1;Parent=gene-LI478_RS17390;Dbxref=Genbank:WP_009484141.1;Name=WP_009484141.1;Ontology_term=GO:0006099,GO:0004149,GO:0045252;gbkey=CDS;gene=odhB;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=dihydrolipoyllysine-residue succinyltransferase activity|0004149||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225870.1;locus_tag=LI478_RS17390;product=2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase;protein_id=WP_009484141.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3562205 3565012 . - . ID=gene-LI478_RS17395;Name=sucA;gbkey=Gene;gene=sucA;gene_biotype=protein_coding;locus_tag=LI478_RS17395 NZ_CP085478.1 Protein Homology CDS 3562205 3565012 . - 0 ID=cds-WP_004147623.1;Parent=gene-LI478_RS17395;Dbxref=Genbank:WP_004147623.1;Name=WP_004147623.1;Ontology_term=GO:0006099,GO:0006554,GO:0006568,GO:0004591,GO:0045252;gbkey=CDS;gene=sucA;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=oxoglutarate dehydrogenase (succinyl-transferring) activity|0004591||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,lysine catabolic process|0006554||IEA,tryptophan metabolic process|0006568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225869.1;locus_tag=LI478_RS17395;product=2-oxoglutarate dehydrogenase E1 component;protein_id=WP_004147623.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3565394 3566110 . - . ID=gene-LI478_RS17400;Name=sdhB;gbkey=Gene;gene=sdhB;gene_biotype=protein_coding;locus_tag=LI478_RS17400 NZ_CP085478.1 Protein Homology CDS 3565394 3566110 . - 0 ID=cds-WP_002894954.1;Parent=gene-LI478_RS17400;Dbxref=Genbank:WP_002894954.1;Name=WP_002894954.1;gbkey=CDS;gene=sdhB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133276.1;locus_tag=LI478_RS17400;product=succinate dehydrogenase iron-sulfur subunit SdhB;protein_id=WP_002894954.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3566126 3567892 . - . ID=gene-LI478_RS17405;Name=sdhA;gbkey=Gene;gene=sdhA;gene_biotype=protein_coding;locus_tag=LI478_RS17405 NZ_CP085478.1 Protein Homology CDS 3566126 3567892 . - 0 ID=cds-WP_004179067.1;Parent=gene-LI478_RS17405;Dbxref=Genbank:WP_004179067.1;Name=WP_004179067.1;Ontology_term=GO:0006099,GO:0022900,GO:0016627,GO:0050660;gbkey=CDS;gene=sdhA;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122549.1;locus_tag=LI478_RS17405;product=succinate dehydrogenase flavoprotein subunit;protein_id=WP_004179067.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3567892 3568239 . - . ID=gene-LI478_RS17410;Name=sdhD;gbkey=Gene;gene=sdhD;gene_biotype=protein_coding;gene_synonym=cybS,dhsD;locus_tag=LI478_RS17410 NZ_CP085478.1 Protein Homology CDS 3567892 3568239 . - 0 ID=cds-WP_002894949.1;Parent=gene-LI478_RS17410;Dbxref=Genbank:WP_002894949.1;Name=WP_002894949.1;gbkey=CDS;gene=sdhD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017455938.1;locus_tag=LI478_RS17410;product=succinate dehydrogenase membrane anchor subunit;protein_id=WP_002894949.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3568233 3568637 . - . ID=gene-LI478_RS17415;Name=sdhC;gbkey=Gene;gene=sdhC;gene_biotype=protein_coding;gene_synonym=cybA,dhsC;locus_tag=LI478_RS17415 NZ_CP085478.1 Protein Homology CDS 3568233 3568637 . - 0 ID=cds-WP_004142216.1;Parent=gene-LI478_RS17415;Dbxref=Genbank:WP_004142216.1;Name=WP_004142216.1;Ontology_term=GO:0006099,GO:0000104,GO:0009055,GO:0016020,GO:0045281;gbkey=CDS;gene=sdhC;go_component=membrane|0016020||IEA,succinate dehydrogenase complex|0045281||IEA;go_function=succinate dehydrogenase activity|0000104||IEA,electron transfer activity|0009055||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000263334.1;locus_tag=LI478_RS17415;product=succinate dehydrogenase cytochrome b556 subunit;protein_id=WP_004142216.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3569278 3570561 . + . ID=gene-LI478_RS17420;Name=gltA;gbkey=Gene;gene=gltA;gene_biotype=protein_coding;locus_tag=LI478_RS17420 NZ_CP085478.1 Protein Homology CDS 3569278 3570561 . + 0 ID=cds-WP_002894943.1;Parent=gene-LI478_RS17420;Dbxref=Genbank:WP_002894943.1;Name=WP_002894943.1;Ontology_term=GO:0006099,GO:0004108;gbkey=CDS;gene=gltA;go_function=citrate (Si)-synthase activity|0004108||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225863.1;locus_tag=LI478_RS17420;product=citrate synthase;protein_id=WP_002894943.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3570652 3571443 . - . ID=gene-LI478_RS17425;Name=nei;gbkey=Gene;gene=nei;gene_biotype=protein_coding;locus_tag=LI478_RS17425 NZ_CP085478.1 Protein Homology CDS 3570652 3571443 . - 0 ID=cds-WP_002894935.1;Parent=gene-LI478_RS17425;Dbxref=Genbank:WP_002894935.1;Name=WP_002894935.1;Ontology_term=GO:0006281,GO:0000703,GO:0003677,GO:0008270,GO:0140078;gbkey=CDS;gene=nei;go_function=oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity|0000703||IEA,DNA binding|0003677||IEA,zinc ion binding|0008270||IEA,class I DNA-(apurinic or apyrimidinic site) endonuclease activity|0140078||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225861.1;locus_tag=LI478_RS17425;product=endonuclease VIII;protein_id=WP_002894935.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3571459 3572103 . - . ID=gene-LI478_RS17430;Name=pcp;gbkey=Gene;gene=pcp;gene_biotype=protein_coding;locus_tag=LI478_RS17430 NZ_CP085478.1 Protein Homology CDS 3571459 3572103 . - 0 ID=cds-WP_004183438.1;Parent=gene-LI478_RS17430;Dbxref=Genbank:WP_004183438.1;Name=WP_004183438.1;Ontology_term=GO:0030163;gbkey=CDS;gene=pcp;go_process=protein catabolic process|0030163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225860.1;locus_tag=LI478_RS17430;product=pyroglutamyl-peptidase I;protein_id=WP_004183438.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3572113 3573108 . - . ID=gene-LI478_RS17435;Name=LI478_RS17435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS17435 NZ_CP085478.1 Protein Homology CDS 3572113 3573108 . - 0 ID=cds-WP_021470144.1;Parent=gene-LI478_RS17435;Dbxref=Genbank:WP_021470144.1;Name=WP_021470144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225859.1;locus_tag=LI478_RS17435;product=DUF979 domain-containing protein;protein_id=WP_021470144.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3573105 3573830 . - . ID=gene-LI478_RS17440;Name=LI478_RS17440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS17440 NZ_CP085478.1 Protein Homology CDS 3573105 3573830 . - 0 ID=cds-WP_002894928.1;Parent=gene-LI478_RS17440;Dbxref=Genbank:WP_002894928.1;Name=WP_002894928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225858.1;locus_tag=LI478_RS17440;product=DUF969 domain-containing protein;protein_id=WP_002894928.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3573912 3574655 . - . ID=gene-LI478_RS17445;Name=pxpA;gbkey=Gene;gene=pxpA;gene_biotype=protein_coding;locus_tag=LI478_RS17445 NZ_CP085478.1 Protein Homology CDS 3573912 3574655 . - 0 ID=cds-WP_004176856.1;Parent=gene-LI478_RS17445;Dbxref=Genbank:WP_004176856.1;Name=WP_004176856.1;Ontology_term=GO:0005975,GO:0003824;gbkey=CDS;gene=pxpA;go_function=catalytic activity|0003824||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225857.1;locus_tag=LI478_RS17445;product=5-oxoprolinase subunit PxpA;protein_id=WP_004176856.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3574645 3575577 . - . ID=gene-LI478_RS17450;Name=LI478_RS17450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS17450 NZ_CP085478.1 Protein Homology CDS 3574645 3575577 . - 0 ID=cds-WP_004147614.1;Parent=gene-LI478_RS17450;Dbxref=Genbank:WP_004147614.1;Name=WP_004147614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225856.1;locus_tag=LI478_RS17450;product=biotin-dependent carboxyltransferase family protein;protein_id=WP_004147614.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3575571 3576227 . - . ID=gene-LI478_RS17455;Name=pxpB;gbkey=Gene;gene=pxpB;gene_biotype=protein_coding;locus_tag=LI478_RS17455 NZ_CP085478.1 Protein Homology CDS 3575571 3576227 . - 0 ID=cds-WP_004176857.1;Parent=gene-LI478_RS17455;Dbxref=Genbank:WP_004176857.1;Name=WP_004176857.1;gbkey=CDS;gene=pxpB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225855.1;locus_tag=LI478_RS17455;product=5-oxoprolinase subunit PxpB;protein_id=WP_004176857.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3576242 3576985 . - . ID=gene-LI478_RS17460;Name=LI478_RS17460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS17460 NZ_CP085478.1 Protein Homology CDS 3576242 3576985 . - 0 ID=cds-WP_004176858.1;Parent=gene-LI478_RS17460;Dbxref=Genbank:WP_004176858.1;Name=WP_004176858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000798886.1;locus_tag=LI478_RS17460;product=type 2 GTP cyclohydrolase I;protein_id=WP_004176858.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3577253 3578731 . + . ID=gene-LI478_RS17465;Name=dtpD;gbkey=Gene;gene=dtpD;gene_biotype=protein_coding;locus_tag=LI478_RS17465 NZ_CP085478.1 Protein Homology CDS 3577253 3578731 . + 0 ID=cds-WP_021470147.1;Parent=gene-LI478_RS17465;Dbxref=Genbank:WP_021470147.1;Name=WP_021470147.1;Ontology_term=GO:0006857,GO:0055085,GO:1904680,GO:0016020;gbkey=CDS;gene=dtpD;go_component=membrane|0016020||IEA;go_function=peptide transmembrane transporter activity|1904680||IEA;go_process=oligopeptide transport|0006857||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225853.1;locus_tag=LI478_RS17465;product=dipeptide permease DtpD;protein_id=WP_021470147.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3578703 3580145 . - . ID=gene-LI478_RS17470;Name=phrB;gbkey=Gene;gene=phrB;gene_biotype=protein_coding;locus_tag=LI478_RS17470 NZ_CP085478.1 Protein Homology CDS 3578703 3580145 . - 0 ID=cds-WP_021312502.1;Parent=gene-LI478_RS17470;Dbxref=Genbank:WP_021312502.1;Name=WP_021312502.1;gbkey=CDS;gene=phrB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225852.1;locus_tag=LI478_RS17470;product=deoxyribodipyrimidine photo-lyase;protein_id=WP_021312502.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3580329 3580538 . - . ID=gene-LI478_RS17475;Name=LI478_RS17475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS17475 NZ_CP085478.1 Protein Homology CDS 3580329 3580538 . - 0 ID=cds-WP_004142243.1;Parent=gene-LI478_RS17475;Dbxref=Genbank:WP_004142243.1;Name=WP_004142243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225851.1;locus_tag=LI478_RS17475;product=DUF2517 family protein;protein_id=WP_004142243.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3580845 3580934 . + . ID=gene-LI478_RS17480;Name=kdpF;gbkey=Gene;gene=kdpF;gene_biotype=protein_coding;locus_tag=LI478_RS17480 NZ_CP085478.1 Protein Homology CDS 3580845 3580934 . + 0 ID=cds-WP_020323459.1;Parent=gene-LI478_RS17480;Dbxref=Genbank:WP_020323459.1;Name=WP_020323459.1;gbkey=CDS;gene=kdpF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588443.1;locus_tag=LI478_RS17480;product=K(+)-transporting ATPase subunit F;protein_id=WP_020323459.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3580934 3582613 . + . ID=gene-LI478_RS17485;Name=kdpA;gbkey=Gene;gene=kdpA;gene_biotype=protein_coding;locus_tag=LI478_RS17485 NZ_CP085478.1 Protein Homology CDS 3580934 3582613 . + 0 ID=cds-WP_004142245.1;Parent=gene-LI478_RS17485;Dbxref=Genbank:WP_004142245.1;Name=WP_004142245.1;Ontology_term=GO:0006813,GO:0008556,GO:0031004;gbkey=CDS;gene=kdpA;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225850.1;locus_tag=LI478_RS17485;product=potassium-transporting ATPase subunit KdpA;protein_id=WP_004142245.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3582634 3584682 . + . ID=gene-LI478_RS17490;Name=kdpB;gbkey=Gene;gene=kdpB;gene_biotype=protein_coding;locus_tag=LI478_RS17490 NZ_CP085478.1 Protein Homology CDS 3582634 3584682 . + 0 ID=cds-WP_004147607.1;Parent=gene-LI478_RS17490;Dbxref=Genbank:WP_004147607.1;Name=WP_004147607.1;Ontology_term=GO:0006813,GO:0008556,GO:0031004;gbkey=CDS;gene=kdpB;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225849.1;locus_tag=LI478_RS17490;product=potassium-transporting ATPase subunit KdpB;protein_id=WP_004147607.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3584693 3585268 . + . ID=gene-LI478_RS17495;Name=kdpC;gbkey=Gene;gene=kdpC;gene_biotype=protein_coding;locus_tag=LI478_RS17495 NZ_CP085478.1 Protein Homology CDS 3584693 3585268 . + 0 ID=cds-WP_004142248.1;Parent=gene-LI478_RS17495;Dbxref=Genbank:WP_004142248.1;Name=WP_004142248.1;Ontology_term=GO:0006813,GO:0008556,GO:0016020;gbkey=CDS;gene=kdpC;go_component=membrane|0016020||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225848.1;locus_tag=LI478_RS17495;product=potassium-transporting ATPase subunit KdpC;protein_id=WP_004142248.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3585269 3587956 . + . ID=gene-LI478_RS17500;Name=kdpD;gbkey=Gene;gene=kdpD;gene_biotype=protein_coding;locus_tag=LI478_RS17500 NZ_CP085478.1 Protein Homology CDS 3585269 3587956 . + 0 ID=cds-WP_032414679.1;Parent=gene-LI478_RS17500;Dbxref=Genbank:WP_032414679.1;Name=WP_032414679.1;Ontology_term=GO:0000160,GO:0000155;gbkey=CDS;gene=kdpD;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225847.1;locus_tag=LI478_RS17500;product=two-component system sensor histidine kinase KdpD;protein_id=WP_032414679.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3587953 3588630 . + . ID=gene-LI478_RS17505;Name=kdpE;gbkey=Gene;gene=kdpE;gene_biotype=protein_coding;locus_tag=LI478_RS17505 NZ_CP085478.1 Protein Homology CDS 3587953 3588630 . + 0 ID=cds-WP_002894776.1;Parent=gene-LI478_RS17505;Dbxref=Genbank:WP_002894776.1;Name=WP_002894776.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=kdpE;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225846.1;locus_tag=LI478_RS17505;product=two-component system response regulator KdpE;protein_id=WP_002894776.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3588612 3589049 . - . ID=gene-LI478_RS17510;Name=LI478_RS17510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS17510 NZ_CP085478.1 Protein Homology CDS 3588612 3589049 . - 0 ID=cds-WP_032414678.1;Parent=gene-LI478_RS17510;Dbxref=Genbank:WP_032414678.1;Name=WP_032414678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225845.1;locus_tag=LI478_RS17510;product=hypothetical protein;protein_id=WP_032414678.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3589104 3590744 . - . ID=gene-LI478_RS17515;Name=pgm;gbkey=Gene;gene=pgm;gene_biotype=protein_coding;locus_tag=LI478_RS17515 NZ_CP085478.1 Protein Homology CDS 3589104 3590744 . - 0 ID=cds-WP_002894773.1;Parent=gene-LI478_RS17515;Dbxref=Genbank:WP_002894773.1;Name=WP_002894773.1;Ontology_term=GO:0005975,GO:0004614;gbkey=CDS;gene=pgm;go_function=phosphoglucomutase activity|0004614||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225844.1;locus_tag=LI478_RS17515;product=phosphoglucomutase (alpha-D-glucose-1%2C6-bisphosphate-dependent);protein_id=WP_002894773.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3590777 3591325 . - . ID=gene-LI478_RS17520;Name=seqA;gbkey=Gene;gene=seqA;gene_biotype=protein_coding;locus_tag=LI478_RS17520 NZ_CP085478.1 Protein Homology CDS 3590777 3591325 . - 0 ID=cds-WP_002894771.1;Parent=gene-LI478_RS17520;Dbxref=Genbank:WP_002894771.1;Name=WP_002894771.1;Ontology_term=GO:0032297,GO:0003677;gbkey=CDS;gene=seqA;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated DNA replication initiation|0032297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225843.1;locus_tag=LI478_RS17520;product=replication initiation negative regulator SeqA;protein_id=WP_002894771.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3591509 3592282 . + . ID=gene-LI478_RS17525;Name=ybfF;gbkey=Gene;gene=ybfF;gene_biotype=protein_coding;locus_tag=LI478_RS17525 NZ_CP085478.1 Protein Homology CDS 3591509 3592282 . + 0 ID=cds-WP_004152229.1;Parent=gene-LI478_RS17525;Dbxref=Genbank:WP_004152229.1;Name=WP_004152229.1;gbkey=CDS;gene=ybfF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004223669.1;locus_tag=LI478_RS17525;product=esterase;protein_id=WP_004152229.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3592416 3592709 . + . ID=gene-LI478_RS17530;Name=ybfE;gbkey=Gene;gene=ybfE;gene_biotype=protein_coding;locus_tag=LI478_RS17530 NZ_CP085478.1 Protein Homology CDS 3592416 3592709 . + 0 ID=cds-WP_002894767.1;Parent=gene-LI478_RS17530;Dbxref=Genbank:WP_002894767.1;Name=WP_002894767.1;gbkey=CDS;gene=ybfE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225840.1;locus_tag=LI478_RS17530;product=LexA regulated protein;protein_id=WP_002894767.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3592861 3593391 . + . ID=gene-LI478_RS17535;Name=fldA;gbkey=Gene;gene=fldA;gene_biotype=protein_coding;locus_tag=LI478_RS17535 NZ_CP085478.1 Protein Homology CDS 3592861 3593391 . + 0 ID=cds-WP_002894765.1;Parent=gene-LI478_RS17535;Dbxref=Genbank:WP_002894765.1;Name=WP_002894765.1;gbkey=CDS;gene=fldA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225839.1;locus_tag=LI478_RS17535;product=flavodoxin FldA;protein_id=WP_002894765.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3593683 3594135 . + . ID=gene-LI478_RS17540;Name=fur;gbkey=Gene;gene=fur;gene_biotype=protein_coding;locus_tag=LI478_RS17540 NZ_CP085478.1 Protein Homology CDS 3593683 3594135 . + 0 ID=cds-WP_002894761.1;Parent=gene-LI478_RS17540;Dbxref=Genbank:WP_002894761.1;Name=WP_002894761.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=fur;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225838.1;locus_tag=LI478_RS17540;product=ferric iron uptake transcriptional regulator;protein_id=WP_002894761.1;transl_table=11 NZ_CP085478.1 RefSeq pseudogene 3594278 3594700 . + . ID=gene-LI478_RS17545;Name=LI478_RS17545;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS17545;partial=true;pseudo=true;start_range=.,3594278 NZ_CP085478.1 Protein Homology CDS 3594278 3594700 . + 0 ID=cds-LI478_RS17545;Parent=gene-LI478_RS17545;Note=is involved in the uptake of citrate and the transport of protons into the cell%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004848845.1;locus_tag=LI478_RS17545;partial=true;product=citrate-proton symporter;pseudo=true;start_range=.,3594278;transl_table=11 NZ_CP085478.1 RefSeq gene 3594752 3595084 . - . ID=gene-LI478_RS17550;Name=chiQ;gbkey=Gene;gene=chiQ;gene_biotype=protein_coding;locus_tag=LI478_RS17550 NZ_CP085478.1 Protein Homology CDS 3594752 3595084 . - 0 ID=cds-WP_002894759.1;Parent=gene-LI478_RS17550;Dbxref=Genbank:WP_002894759.1;Name=WP_002894759.1;gbkey=CDS;gene=chiQ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225837.1;locus_tag=LI478_RS17550;product=ChiQ/YbfN family lipoprotein;protein_id=WP_002894759.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3595132 3596535 . - . ID=gene-LI478_RS17555;Name=chiP;gbkey=Gene;gene=chiP;gene_biotype=protein_coding;locus_tag=LI478_RS17555 NZ_CP085478.1 Protein Homology CDS 3595132 3596535 . - 0 ID=cds-WP_004152230.1;Parent=gene-LI478_RS17555;Dbxref=Genbank:WP_004152230.1;Name=WP_004152230.1;gbkey=CDS;gene=chiP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225836.1;locus_tag=LI478_RS17555;product=chitoporin;protein_id=WP_004152230.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3596609 3596917 . + . ID=gene-LI478_RS17560;Name=LI478_RS17560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS17560 NZ_CP085478.1 Protein Homology CDS 3596609 3596917 . + 0 ID=cds-WP_004176868.1;Parent=gene-LI478_RS17560;Dbxref=Genbank:WP_004176868.1;Name=WP_004176868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225835.1;locus_tag=LI478_RS17560;product=hypothetical protein;protein_id=WP_004176868.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3596972 3598639 . - . ID=gene-LI478_RS17565;Name=glnS;gbkey=Gene;gene=glnS;gene_biotype=protein_coding;locus_tag=LI478_RS17565 NZ_CP085478.1 Protein Homology CDS 3596972 3598639 . - 0 ID=cds-WP_016529783.1;Parent=gene-LI478_RS17565;Dbxref=Genbank:WP_016529783.1;Name=WP_016529783.1;Ontology_term=GO:0006425,GO:0004819,GO:0005737;gbkey=CDS;gene=glnS;go_component=cytoplasm|0005737||IEA;go_function=glutamine-tRNA ligase activity|0004819||IEA;go_process=glutaminyl-tRNA aminoacylation|0006425||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225834.1;locus_tag=LI478_RS17565;product=glutamine--tRNA ligase;protein_id=WP_016529783.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3598818 3600773 . - . ID=gene-LI478_RS17570;Name=nagE;gbkey=Gene;gene=nagE;gene_biotype=protein_coding;locus_tag=LI478_RS17570 NZ_CP085478.1 Protein Homology CDS 3598818 3600773 . - 0 ID=cds-WP_004147599.1;Parent=gene-LI478_RS17570;Dbxref=Genbank:WP_004147599.1;Name=WP_004147599.1;Ontology_term=GO:0009401,GO:0008982,GO:0015572,GO:0016020;gbkey=CDS;gene=nagE;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,N-acetylglucosamine transmembrane transporter activity|0015572||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225833.1;locus_tag=LI478_RS17570;product=PTS N-acetyl glucosamine transporter subunit IIABC;protein_id=WP_004147599.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3601088 3601888 . + . ID=gene-LI478_RS17575;Name=nagB;gbkey=Gene;gene=nagB;gene_biotype=protein_coding;locus_tag=LI478_RS17575 NZ_CP085478.1 Protein Homology CDS 3601088 3601888 . + 0 ID=cds-WP_002894749.1;Parent=gene-LI478_RS17575;Dbxref=Genbank:WP_002894749.1;Name=WP_002894749.1;Ontology_term=GO:0006044,GO:0004342;gbkey=CDS;gene=nagB;go_function=glucosamine-6-phosphate deaminase activity|0004342||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008805656.1;locus_tag=LI478_RS17575;product=glucosamine-6-phosphate deaminase;protein_id=WP_002894749.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3602002 3603150 . + . ID=gene-LI478_RS17580;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=LI478_RS17580 NZ_CP085478.1 Protein Homology CDS 3602002 3603150 . + 0 ID=cds-WP_002894747.1;Parent=gene-LI478_RS17580;Dbxref=Genbank:WP_002894747.1;Name=WP_002894747.1;Ontology_term=GO:0006044,GO:0008448;gbkey=CDS;gene=nagA;go_function=N-acetylglucosamine-6-phosphate deacetylase activity|0008448||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225831.1;locus_tag=LI478_RS17580;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WP_002894747.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3603159 3604379 . + . ID=gene-LI478_RS17585;Name=LI478_RS17585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS17585 NZ_CP085478.1 Protein Homology CDS 3603159 3604379 . + 0 ID=cds-WP_029602342.1;Parent=gene-LI478_RS17585;Dbxref=Genbank:WP_029602342.1;Name=WP_029602342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225830.1;locus_tag=LI478_RS17585;product=ROK family transcriptional regulator;protein_id=WP_029602342.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3604496 3605248 . + . ID=gene-LI478_RS17590;Name=LI478_RS17590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS17590 NZ_CP085478.1 Protein Homology CDS 3604496 3605248 . + 0 ID=cds-WP_002894738.1;Parent=gene-LI478_RS17590;Dbxref=Genbank:WP_002894738.1;Name=WP_002894738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225829.1;locus_tag=LI478_RS17590;product=HAD-IIA family hydrolase;protein_id=WP_002894738.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3605527 3607191 . + . ID=gene-LI478_RS17595;Name=asnB;gbkey=Gene;gene=asnB;gene_biotype=protein_coding;locus_tag=LI478_RS17595 NZ_CP085478.1 Protein Homology CDS 3605527 3607191 . + 0 ID=cds-WP_002894734.1;Parent=gene-LI478_RS17595;Dbxref=Genbank:WP_002894734.1;Name=WP_002894734.1;Ontology_term=GO:0006529,GO:0004066;gbkey=CDS;gene=asnB;go_function=asparagine synthase (glutamine-hydrolyzing) activity|0004066||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001724523.1;locus_tag=LI478_RS17595;product=asparagine synthase B;protein_id=WP_002894734.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3607429 3607505 . + . ID=gene-LI478_RS17600;Name=LI478_RS17600;gbkey=Gene;gene_biotype=tRNA;locus_tag=LI478_RS17600 NZ_CP085478.1 tRNAscan-SE tRNA 3607429 3607505 . + . ID=rna-LI478_RS17600;Parent=gene-LI478_RS17600;anticodon=(pos:3607463..3607465);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS17600;product=tRNA-Met NZ_CP085478.1 tRNAscan-SE exon 3607429 3607505 . + . ID=exon-LI478_RS17600-1;Parent=rna-LI478_RS17600;anticodon=(pos:3607463..3607465);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS17600;product=tRNA-Met NZ_CP085478.1 RefSeq gene 3607514 3607598 . + . ID=gene-LI478_RS17605;Name=LI478_RS17605;gbkey=Gene;gene_biotype=tRNA;locus_tag=LI478_RS17605 NZ_CP085478.1 tRNAscan-SE tRNA 3607514 3607598 . + . ID=rna-LI478_RS17605;Parent=gene-LI478_RS17605;anticodon=(pos:3607548..3607550);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS17605;product=tRNA-Leu NZ_CP085478.1 tRNAscan-SE exon 3607514 3607598 . + . ID=exon-LI478_RS17605-1;Parent=rna-LI478_RS17605;anticodon=(pos:3607548..3607550);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS17605;product=tRNA-Leu NZ_CP085478.1 RefSeq gene 3607622 3607696 . + . ID=gene-LI478_RS17610;Name=LI478_RS17610;gbkey=Gene;gene_biotype=tRNA;locus_tag=LI478_RS17610 NZ_CP085478.1 tRNAscan-SE tRNA 3607622 3607696 . + . ID=rna-LI478_RS17610;Parent=gene-LI478_RS17610;anticodon=(pos:3607654..3607656);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS17610;product=tRNA-Gln NZ_CP085478.1 tRNAscan-SE exon 3607622 3607696 . + . ID=exon-LI478_RS17610-1;Parent=rna-LI478_RS17610;anticodon=(pos:3607654..3607656);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS17610;product=tRNA-Gln NZ_CP085478.1 RefSeq gene 3607733 3607807 . + . ID=gene-LI478_RS17615;Name=LI478_RS17615;gbkey=Gene;gene_biotype=tRNA;locus_tag=LI478_RS17615 NZ_CP085478.1 tRNAscan-SE tRNA 3607733 3607807 . + . ID=rna-LI478_RS17615;Parent=gene-LI478_RS17615;anticodon=(pos:3607765..3607767);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS17615;product=tRNA-Gln NZ_CP085478.1 tRNAscan-SE exon 3607733 3607807 . + . ID=exon-LI478_RS17615-1;Parent=rna-LI478_RS17615;anticodon=(pos:3607765..3607767);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS17615;product=tRNA-Gln NZ_CP085478.1 RefSeq gene 3607831 3607907 . + . ID=gene-LI478_RS17620;Name=LI478_RS17620;gbkey=Gene;gene_biotype=tRNA;locus_tag=LI478_RS17620 NZ_CP085478.1 tRNAscan-SE tRNA 3607831 3607907 . + . ID=rna-LI478_RS17620;Parent=gene-LI478_RS17620;anticodon=(pos:3607865..3607867);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS17620;product=tRNA-Met NZ_CP085478.1 tRNAscan-SE exon 3607831 3607907 . + . ID=exon-LI478_RS17620-1;Parent=rna-LI478_RS17620;anticodon=(pos:3607865..3607867);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS17620;product=tRNA-Met NZ_CP085478.1 RefSeq gene 3607955 3608029 . + . ID=gene-LI478_RS17625;Name=LI478_RS17625;gbkey=Gene;gene_biotype=tRNA;locus_tag=LI478_RS17625 NZ_CP085478.1 tRNAscan-SE tRNA 3607955 3608029 . + . ID=rna-LI478_RS17625;Parent=gene-LI478_RS17625;anticodon=(pos:3607987..3607989);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS17625;product=tRNA-Gln NZ_CP085478.1 tRNAscan-SE exon 3607955 3608029 . + . ID=exon-LI478_RS17625-1;Parent=rna-LI478_RS17625;anticodon=(pos:3607987..3607989);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS17625;product=tRNA-Gln NZ_CP085478.1 RefSeq gene 3608105 3608179 . + . ID=gene-LI478_RS17630;Name=LI478_RS17630;gbkey=Gene;gene_biotype=tRNA;locus_tag=LI478_RS17630 NZ_CP085478.1 tRNAscan-SE tRNA 3608105 3608179 . + . ID=rna-LI478_RS17630;Parent=gene-LI478_RS17630;anticodon=(pos:3608137..3608139);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS17630;product=tRNA-Gln NZ_CP085478.1 tRNAscan-SE exon 3608105 3608179 . + . ID=exon-LI478_RS17630-1;Parent=rna-LI478_RS17630;anticodon=(pos:3608137..3608139);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS17630;product=tRNA-Gln NZ_CP085478.1 RefSeq gene 3608299 3609474 . - . ID=gene-LI478_RS17635;Name=ubiF;gbkey=Gene;gene=ubiF;gene_biotype=protein_coding;locus_tag=LI478_RS17635 NZ_CP085478.1 Protein Homology CDS 3608299 3609474 . - 0 ID=cds-WP_040088679.1;Parent=gene-LI478_RS17635;Dbxref=Genbank:WP_040088679.1;Name=WP_040088679.1;Ontology_term=GO:0006744,GO:0016709;gbkey=CDS;gene=ubiF;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225827.1;locus_tag=LI478_RS17635;product=3-demethoxyubiquinol 3-hydroxylase;protein_id=WP_040088679.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3609654 3611078 . + . ID=gene-LI478_RS17640;Name=miaB;gbkey=Gene;gene=miaB;gene_biotype=protein_coding;locus_tag=LI478_RS17640 NZ_CP085478.1 Protein Homology CDS 3609654 3611078 . + 0 ID=cds-WP_002894730.1;Parent=gene-LI478_RS17640;Dbxref=Genbank:WP_002894730.1;Name=WP_002894730.1;Ontology_term=GO:0006400,GO:0016782,GO:0051539,GO:1904047;gbkey=CDS;gene=miaB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225826.1;locus_tag=LI478_RS17640;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;protein_id=WP_002894730.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3611232 3612278 . + . ID=gene-LI478_RS17645;Name=LI478_RS17645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS17645 NZ_CP085478.1 Protein Homology CDS 3611232 3612278 . + 0 ID=cds-WP_080870575.1;Parent=gene-LI478_RS17645;Dbxref=Genbank:WP_080870575.1;Name=WP_080870575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225825.1;locus_tag=LI478_RS17645;product=PhoH family protein;protein_id=WP_080870575.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3612275 3612748 . + . ID=gene-LI478_RS17650;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=LI478_RS17650 NZ_CP085478.1 Protein Homology CDS 3612275 3612748 . + 0 ID=cds-WP_002894722.1;Parent=gene-LI478_RS17650;Dbxref=Genbank:WP_002894722.1;Name=WP_002894722.1;Ontology_term=GO:0042254,GO:0004540,GO:0046872;gbkey=CDS;gene=ybeY;go_function=ribonuclease activity|0004540||IEA,metal ion binding|0046872||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225824.1;locus_tag=LI478_RS17650;product=rRNA maturation RNase YbeY;protein_id=WP_002894722.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3612896 3613774 . + . ID=gene-LI478_RS17655;Name=corC;gbkey=Gene;gene=corC;gene_biotype=protein_coding;locus_tag=LI478_RS17655 NZ_CP085478.1 Protein Homology CDS 3612896 3613774 . + 0 ID=cds-WP_004197606.1;Parent=gene-LI478_RS17655;Dbxref=Genbank:WP_004197606.1;Name=WP_004197606.1;Note=CorC(YbeX) belongs to the Cyclin M Mg2+ Exporter (CNNM) family%2C and was characterized as belonging to a set of three proteins%2C at least one of which must be present for CorA to function.;Ontology_term=GO:0050660;gbkey=CDS;gene=corC;go_function=flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459659.1;locus_tag=LI478_RS17655;product=CNNM family magnesium/cobalt transport protein CorC;protein_id=WP_004197606.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3613900 3615438 . + . ID=gene-LI478_RS17660;Name=lnt;gbkey=Gene;gene=lnt;gene_biotype=protein_coding;locus_tag=LI478_RS17660 NZ_CP085478.1 Protein Homology CDS 3613900 3615438 . + 0 ID=cds-WP_004179036.1;Parent=gene-LI478_RS17660;Dbxref=Genbank:WP_004179036.1;Name=WP_004179036.1;Ontology_term=GO:0006497,GO:0042158,GO:0016410,GO:0016020;gbkey=CDS;gene=lnt;go_component=membrane|0016020||IEA;go_function=N-acyltransferase activity|0016410||IEA;go_process=protein lipidation|0006497||IEA,lipoprotein biosynthetic process|0042158||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225822.1;locus_tag=LI478_RS17660;product=apolipoprotein N-acyltransferase;protein_id=WP_004179036.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3615793 3616704 . + . ID=gene-LI478_RS17665;Name=LI478_RS17665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS17665 NZ_CP085478.1 Protein Homology CDS 3615793 3616704 . + 0 ID=cds-WP_002894712.1;Parent=gene-LI478_RS17665;Dbxref=Genbank:WP_002894712.1;Name=WP_002894712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225821.1;locus_tag=LI478_RS17665;product=amino acid ABC transporter substrate-binding protein;protein_id=WP_002894712.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3616869 3617609 . + . ID=gene-LI478_RS17670;Name=LI478_RS17670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS17670 NZ_CP085478.1 Protein Homology CDS 3616869 3617609 . + 0 ID=cds-WP_002894709.1;Parent=gene-LI478_RS17670;Dbxref=Genbank:WP_002894709.1;Name=WP_002894709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225820.1;locus_tag=LI478_RS17670;product=amino acid ABC transporter permease;protein_id=WP_002894709.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3617609 3618283 . + . ID=gene-LI478_RS17675;Name=gltK;gbkey=Gene;gene=gltK;gene_biotype=protein_coding;locus_tag=LI478_RS17675 NZ_CP085478.1 Protein Homology CDS 3617609 3618283 . + 0 ID=cds-WP_004212642.1;Parent=gene-LI478_RS17675;Dbxref=Genbank:WP_004212642.1;Name=WP_004212642.1;gbkey=CDS;gene=gltK;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225819.1;locus_tag=LI478_RS17675;product=glutamate/aspartate ABC transporter permease GltK;protein_id=WP_004212642.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3618283 3619008 . + . ID=gene-LI478_RS17680;Name=LI478_RS17680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS17680 NZ_CP085478.1 Protein Homology CDS 3618283 3619008 . + 0 ID=cds-WP_021441422.1;Parent=gene-LI478_RS17680;Dbxref=Genbank:WP_021441422.1;Name=WP_021441422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020245804.1;locus_tag=LI478_RS17680;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_021441422.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3619390 3621060 . + . ID=gene-LI478_RS17685;Name=LI478_RS17685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS17685 NZ_CP085478.1 Protein Homology CDS 3619390 3621060 . + 0 ID=cds-WP_004176875.1;Parent=gene-LI478_RS17685;Dbxref=Genbank:WP_004176875.1;Name=WP_004176875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225816.1;locus_tag=LI478_RS17685;product=ShlB/FhaC/HecB family hemolysin secretion/activation protein;protein_id=WP_004176875.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3621126 3622919 . + . ID=gene-LI478_RS17690;Name=LI478_RS17690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS17690 NZ_CP085478.1 Protein Homology CDS 3621126 3622919 . + 0 ID=cds-WP_002894701.1;Parent=gene-LI478_RS17690;Dbxref=Genbank:WP_002894701.1;Name=WP_002894701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225815.1;locus_tag=LI478_RS17690;product=filamentous hemagglutinin N-terminal domain-containing protein;protein_id=WP_002894701.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3622965 3623447 . - . ID=gene-LI478_RS17695;Name=LI478_RS17695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS17695 NZ_CP085478.1 Protein Homology CDS 3622965 3623447 . - 0 ID=cds-WP_002894699.1;Parent=gene-LI478_RS17695;Dbxref=Genbank:WP_002894699.1;Name=WP_002894699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308708.1;locus_tag=LI478_RS17695;product=zinc ribbon-containing protein;protein_id=WP_002894699.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3623674 3626256 . + . ID=gene-LI478_RS17700;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=LI478_RS17700 NZ_CP085478.1 Protein Homology CDS 3623674 3626256 . + 0 ID=cds-WP_004147581.1;Parent=gene-LI478_RS17700;Dbxref=Genbank:WP_004147581.1;Name=WP_004147581.1;Ontology_term=GO:0006429,GO:0004823,GO:0005737;gbkey=CDS;gene=leuS;go_component=cytoplasm|0005737||IEA;go_function=leucine-tRNA ligase activity|0004823||IEA;go_process=leucyl-tRNA aminoacylation|0006429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008456064.1;locus_tag=LI478_RS17700;product=leucine--tRNA ligase;protein_id=WP_004147581.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3626271 3626861 . + . ID=gene-LI478_RS17705;Name=lptE;gbkey=Gene;gene=lptE;gene_biotype=protein_coding;locus_tag=LI478_RS17705 NZ_CP085478.1 Protein Homology CDS 3626271 3626861 . + 0 ID=cds-WP_002894693.1;Parent=gene-LI478_RS17705;Dbxref=Genbank:WP_002894693.1;Name=WP_002894693.1;Ontology_term=GO:0043165,GO:0019867;gbkey=CDS;gene=lptE;go_component=outer membrane|0019867||IEA;go_process=Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002894693.1;locus_tag=LI478_RS17705;product=LPS assembly lipoprotein LptE;protein_id=WP_002894693.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3626861 3627892 . + . ID=gene-LI478_RS17710;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=LI478_RS17710 NZ_CP085478.1 Protein Homology CDS 3626861 3627892 . + 0 ID=cds-WP_002894692.1;Parent=gene-LI478_RS17710;Dbxref=Genbank:WP_002894692.1;Name=WP_002894692.1;Ontology_term=GO:0006260,GO:0003887,GO:0009360;gbkey=CDS;gene=holA;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415173.1;locus_tag=LI478_RS17710;product=DNA polymerase III subunit delta;protein_id=WP_002894692.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3627885 3628535 . + . ID=gene-LI478_RS17715;Name=nadD;gbkey=Gene;gene=nadD;gene_biotype=protein_coding;locus_tag=LI478_RS17715 NZ_CP085478.1 Protein Homology CDS 3627885 3628535 . + 0 ID=cds-WP_025368344.1;Parent=gene-LI478_RS17715;Dbxref=Genbank:WP_025368344.1;Name=WP_025368344.1;Ontology_term=GO:0009435,GO:0016779;gbkey=CDS;gene=nadD;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225810.1;locus_tag=LI478_RS17715;product=nicotinate-nucleotide adenylyltransferase;protein_id=WP_025368344.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3628608 3629237 . + . ID=gene-LI478_RS17720;Name=LI478_RS17720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS17720 NZ_CP085478.1 Protein Homology CDS 3628608 3629237 . + 0 ID=cds-WP_021441419.1;Parent=gene-LI478_RS17720;Dbxref=Genbank:WP_021441419.1;Name=WP_021441419.1;Ontology_term=GO:0009236,GO:0043755;gbkey=CDS;go_function=alpha-ribazole phosphatase activity|0043755||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225809.1;locus_tag=LI478_RS17720;product=adenosylcobalamin/alpha-ribazole phosphatase;protein_id=WP_021441419.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3629460 3629777 . + . ID=gene-LI478_RS17725;Name=rsfS;gbkey=Gene;gene=rsfS;gene_biotype=protein_coding;locus_tag=LI478_RS17725 NZ_CP085478.1 Protein Homology CDS 3629460 3629777 . + 0 ID=cds-WP_002894623.1;Parent=gene-LI478_RS17725;Dbxref=Genbank:WP_002894623.1;Name=WP_002894623.1;Ontology_term=GO:0017148,GO:0043022;gbkey=CDS;gene=rsfS;go_function=ribosome binding|0043022||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007373852.1;locus_tag=LI478_RS17725;product=ribosome silencing factor;protein_id=WP_002894623.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3629781 3630248 . + . ID=gene-LI478_RS17730;Name=rlmH;gbkey=Gene;gene=rlmH;gene_biotype=protein_coding;locus_tag=LI478_RS17730 NZ_CP085478.1 Protein Homology CDS 3629781 3630248 . + 0 ID=cds-WP_002894620.1;Parent=gene-LI478_RS17730;Dbxref=Genbank:WP_002894620.1;Name=WP_002894620.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rlmH;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016245807.1;locus_tag=LI478_RS17730;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;protein_id=WP_002894620.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3630276 3632177 . + . ID=gene-LI478_RS17735;Name=mrdA;gbkey=Gene;gene=mrdA;gene_biotype=protein_coding;locus_tag=LI478_RS17735 NZ_CP085478.1 Protein Homology CDS 3630276 3632177 . + 0 ID=cds-WP_002894617.1;Parent=gene-LI478_RS17735;Dbxref=Genbank:WP_002894617.1;Name=WP_002894617.1;Ontology_term=GO:0009252,GO:0008658,GO:0009002,GO:0016020;gbkey=CDS;gene=mrdA;go_component=membrane|0016020||IEA;go_function=penicillin binding|0008658||IEA,serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225806.1;locus_tag=LI478_RS17735;product=peptidoglycan DD-transpeptidase MrdA;protein_id=WP_002894617.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3632177 3633289 . + . ID=gene-LI478_RS17740;Name=mrdB;gbkey=Gene;gene=mrdB;gene_biotype=protein_coding;gene_synonym=rodA;locus_tag=LI478_RS17740 NZ_CP085478.1 Protein Homology CDS 3632177 3633289 . + 0 ID=cds-WP_002894613.1;Parent=gene-LI478_RS17740;Dbxref=Genbank:WP_002894613.1;Name=WP_002894613.1;Note=rod shape-determining protein RodA;gbkey=CDS;gene=mrdB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004885876.1;locus_tag=LI478_RS17740;product=peptidoglycan glycosyltransferase MrdB;protein_id=WP_002894613.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3633301 3634449 . + . ID=gene-LI478_RS17745;Name=rlpA;gbkey=Gene;gene=rlpA;gene_biotype=protein_coding;locus_tag=LI478_RS17745 NZ_CP085478.1 Protein Homology CDS 3633301 3634449 . + 0 ID=cds-WP_004147579.1;Parent=gene-LI478_RS17745;Dbxref=Genbank:WP_004147579.1;Name=WP_004147579.1;Ontology_term=GO:0042834;gbkey=CDS;gene=rlpA;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225804.1;locus_tag=LI478_RS17745;product=endolytic peptidoglycan transglycosylase RlpA;protein_id=WP_004147579.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3634588 3635787 . + . ID=gene-LI478_RS17750;Name=dacA;gbkey=Gene;gene=dacA;gene_biotype=protein_coding;locus_tag=LI478_RS17750 NZ_CP085478.1 Protein Homology CDS 3634588 3635787 . + 0 ID=cds-WP_002894539.1;Parent=gene-LI478_RS17750;Dbxref=Genbank:WP_002894539.1;Name=WP_002894539.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=dacA;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415165.1;locus_tag=LI478_RS17750;product=D-alanyl-D-alanine carboxypeptidase DacA;protein_id=WP_002894539.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3635900 3636163 . + . ID=gene-LI478_RS17755;Name=ybeD;gbkey=Gene;gene=ybeD;gene_biotype=protein_coding;locus_tag=LI478_RS17755 NZ_CP085478.1 Protein Homology CDS 3635900 3636163 . + 0 ID=cds-WP_002894474.1;Parent=gene-LI478_RS17755;Dbxref=Genbank:WP_002894474.1;Name=WP_002894474.1;gbkey=CDS;gene=ybeD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225802.1;locus_tag=LI478_RS17755;product=DUF493 family protein YbeD;protein_id=WP_002894474.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3636268 3636912 . + . ID=gene-LI478_RS17760;Name=lipB;gbkey=Gene;gene=lipB;gene_biotype=protein_coding;locus_tag=LI478_RS17760 NZ_CP085478.1 Protein Homology CDS 3636268 3636912 . + 0 ID=cds-WP_002894472.1;Parent=gene-LI478_RS17760;Dbxref=Genbank:WP_002894472.1;Name=WP_002894472.1;Ontology_term=GO:0009249,GO:0033819;gbkey=CDS;gene=lipB;go_function=lipoyl(octanoyl) transferase activity|0033819||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225801.1;locus_tag=LI478_RS17760;product=lipoyl(octanoyl) transferase LipB;protein_id=WP_002894472.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3637106 3638002 . + . ID=gene-LI478_RS17765;Name=LI478_RS17765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS17765 NZ_CP085478.1 Protein Homology CDS 3637106 3638002 . + 0 ID=cds-WP_064153208.1;Parent=gene-LI478_RS17765;Dbxref=Genbank:WP_064153208.1;Name=WP_064153208.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225800.1;locus_tag=LI478_RS17765;product=YbeF family transcriptional regulator;protein_id=WP_064153208.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3638183 3639148 . + . ID=gene-LI478_RS17770;Name=lipA;gbkey=Gene;gene=lipA;gene_biotype=protein_coding;locus_tag=LI478_RS17770 NZ_CP085478.1 Protein Homology CDS 3638183 3639148 . + 0 ID=cds-WP_002894467.1;Parent=gene-LI478_RS17770;Dbxref=Genbank:WP_002894467.1;Name=WP_002894467.1;Ontology_term=GO:0009107,GO:0016992,GO:0051539,GO:1904047;gbkey=CDS;gene=lipA;go_function=lipoate synthase activity|0016992||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=lipoate biosynthetic process|0009107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904980.1;locus_tag=LI478_RS17770;product=lipoyl synthase;protein_id=WP_002894467.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3639339 3639545 . - . ID=gene-LI478_RS17775;Name=tatE;gbkey=Gene;gene=tatE;gene_biotype=protein_coding;locus_tag=LI478_RS17775 NZ_CP085478.1 Protein Homology CDS 3639339 3639545 . - 0 ID=cds-WP_002894464.1;Parent=gene-LI478_RS17775;Dbxref=Genbank:WP_002894464.1;Name=WP_002894464.1;gbkey=CDS;gene=tatE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225798.1;locus_tag=LI478_RS17775;product=twin-arginine translocase subunit TatE;protein_id=WP_002894464.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3639788 3640576 . - . ID=gene-LI478_RS17780;Name=LI478_RS17780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS17780 NZ_CP085478.1 Protein Homology CDS 3639788 3640576 . - 0 ID=cds-WP_004191334.1;Parent=gene-LI478_RS17780;Dbxref=Genbank:WP_004191334.1;Name=WP_004191334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225797.1;locus_tag=LI478_RS17780;product=deaminated glutathione amidase;protein_id=WP_004191334.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3640666 3641049 . + . ID=gene-LI478_RS17785;Name=crcB;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=LI478_RS17785 NZ_CP085478.1 Protein Homology CDS 3640666 3641049 . + 0 ID=cds-WP_002894459.1;Parent=gene-LI478_RS17785;Dbxref=Genbank:WP_002894459.1;Name=WP_002894459.1;Ontology_term=GO:0016020;gbkey=CDS;gene=crcB;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225796.1;locus_tag=LI478_RS17785;product=fluoride efflux transporter CrcB;protein_id=WP_002894459.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3641117 3641326 . - . ID=gene-LI478_RS17790;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=LI478_RS17790 NZ_CP085478.1 Protein Homology CDS 3641117 3641326 . - 0 ID=cds-WP_002439184.1;Parent=gene-LI478_RS17790;Dbxref=Genbank:WP_002439184.1;Name=WP_002439184.1;gbkey=CDS;gene=cspE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225795.1;locus_tag=LI478_RS17790;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_002439184.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3641521 3642039 . - . ID=gene-LI478_RS17795;Name=pagP;gbkey=Gene;gene=pagP;gene_biotype=protein_coding;locus_tag=LI478_RS17795 NZ_CP085478.1 Protein Homology CDS 3641521 3642039 . - 0 ID=cds-WP_004183399.1;Parent=gene-LI478_RS17795;Dbxref=Genbank:WP_004183399.1;Name=WP_004183399.1;gbkey=CDS;gene=pagP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004848766.1;locus_tag=LI478_RS17795;product=lipid IV(A) palmitoyltransferase PagP;protein_id=WP_004183399.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3642378 3643751 . + . ID=gene-LI478_RS17800;Name=dcuC;gbkey=Gene;gene=dcuC;gene_biotype=protein_coding;locus_tag=LI478_RS17800 NZ_CP085478.1 Protein Homology CDS 3642378 3643751 . + 0 ID=cds-WP_031592802.1;Parent=gene-LI478_RS17800;Dbxref=Genbank:WP_031592802.1;Name=WP_031592802.1;Ontology_term=GO:0015740,GO:0015556;gbkey=CDS;gene=dcuC;go_function=C4-dicarboxylate transmembrane transporter activity|0015556||IEA;go_process=C4-dicarboxylate transport|0015740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225793.1;locus_tag=LI478_RS17800;product=anaerobic C4-dicarboxylate transporter DcuC;protein_id=WP_031592802.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3643844 3644641 . + . ID=gene-LI478_RS17805;Name=rna;gbkey=Gene;gene=rna;gene_biotype=protein_coding;locus_tag=LI478_RS17805 NZ_CP085478.1 Protein Homology CDS 3643844 3644641 . + 0 ID=cds-WP_004176884.1;Parent=gene-LI478_RS17805;Dbxref=Genbank:WP_004176884.1;Name=WP_004176884.1;gbkey=CDS;gene=rna;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225792.1;locus_tag=LI478_RS17805;product=ribonuclease I;protein_id=WP_004176884.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3644820 3645230 . + . ID=gene-LI478_RS17810;Name=rnk;gbkey=Gene;gene=rnk;gene_biotype=protein_coding;locus_tag=LI478_RS17810 NZ_CP085478.1 Protein Homology CDS 3644820 3645230 . + 0 ID=cds-WP_002894404.1;Parent=gene-LI478_RS17810;Dbxref=Genbank:WP_002894404.1;Name=WP_002894404.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=rnk;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225791.1;locus_tag=LI478_RS17810;product=nucleoside diphosphate kinase regulator;protein_id=WP_002894404.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3645417 3645845 . + . ID=gene-LI478_RS17815;Name=uspG;gbkey=Gene;gene=uspG;gene_biotype=protein_coding;locus_tag=LI478_RS17815 NZ_CP085478.1 Protein Homology CDS 3645417 3645845 . + 0 ID=cds-WP_002894401.1;Parent=gene-LI478_RS17815;Dbxref=Genbank:WP_002894401.1;Name=WP_002894401.1;gbkey=CDS;gene=uspG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225790.1;locus_tag=LI478_RS17815;product=universal stress protein UspG;protein_id=WP_002894401.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3645922 3647487 . - . ID=gene-LI478_RS17820;Name=ahpF;gbkey=Gene;gene=ahpF;gene_biotype=protein_coding;locus_tag=LI478_RS17820 NZ_CP085478.1 Protein Homology CDS 3645922 3647487 . - 0 ID=cds-WP_002894398.1;Parent=gene-LI478_RS17820;Dbxref=Genbank:WP_002894398.1;Name=WP_002894398.1;Ontology_term=GO:0006805,GO:0009398,GO:0016668;gbkey=CDS;gene=ahpF;go_function=oxidoreductase activity%2C acting on a sulfur group of donors%2C NAD(P) as acceptor|0016668||IEA;go_process=xenobiotic metabolic process|0006805||IEA,FMN biosynthetic process|0009398||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017455864.1;locus_tag=LI478_RS17820;product=alkyl hydroperoxide reductase subunit F;protein_id=WP_002894398.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3647675 3648238 . - . ID=gene-LI478_RS17825;Name=ahpC;gbkey=Gene;gene=ahpC;gene_biotype=protein_coding;locus_tag=LI478_RS17825 NZ_CP085478.1 Protein Homology CDS 3647675 3648238 . - 0 ID=cds-WP_002894394.1;Parent=gene-LI478_RS17825;Dbxref=Genbank:WP_002894394.1;Name=WP_002894394.1;Ontology_term=GO:0006979,GO:0102039;gbkey=CDS;gene=ahpC;go_function=NADH-dependent peroxiredoxin activity|0102039||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003858764.1;locus_tag=LI478_RS17825;product=alkyl hydroperoxide reductase subunit C;protein_id=WP_002894394.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3648650 3649399 . + . ID=gene-LI478_RS17830;Name=dsbG;gbkey=Gene;gene=dsbG;gene_biotype=protein_coding;locus_tag=LI478_RS17830 NZ_CP085478.1 Protein Homology CDS 3648650 3649399 . + 0 ID=cds-WP_002894375.1;Parent=gene-LI478_RS17830;Dbxref=Genbank:WP_002894375.1;Name=WP_002894375.1;gbkey=CDS;gene=dsbG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225787.1;locus_tag=LI478_RS17830;product=thiol:disulfide interchange protein DsbG;protein_id=WP_002894375.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3649580 3650512 . + . ID=gene-LI478_RS17835;Name=LI478_RS17835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS17835 NZ_CP085478.1 Protein Homology CDS 3649580 3650512 . + 0 ID=cds-WP_002894372.1;Parent=gene-LI478_RS17835;Dbxref=Genbank:WP_002894372.1;Name=WP_002894372.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225786.1;locus_tag=LI478_RS17835;product=LysR family transcriptional regulator;protein_id=WP_002894372.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3650623 3651846 . + . ID=gene-LI478_RS17840;Name=LI478_RS17840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS17840 NZ_CP085478.1 Protein Homology CDS 3650623 3651846 . + 0 ID=cds-WP_032414671.1;Parent=gene-LI478_RS17840;Dbxref=Genbank:WP_032414671.1;Name=WP_032414671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225785.1;locus_tag=LI478_RS17840;product=DUF3440 domain-containing protein;protein_id=WP_032414671.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3651831 3652457 . + . ID=gene-LI478_RS17845;Name=LI478_RS17845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS17845 NZ_CP085478.1 Protein Homology CDS 3651831 3652457 . + 0 ID=cds-WP_004151651.1;Parent=gene-LI478_RS17845;Dbxref=Genbank:WP_004151651.1;Name=WP_004151651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225784.1;locus_tag=LI478_RS17845;product=ParB/RepB/Spo0J family partition protein;protein_id=WP_004151651.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3652458 3653603 . - . ID=gene-LI478_RS17850;Name=LI478_RS17850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS17850 NZ_CP085478.1 Protein Homology CDS 3652458 3653603 . - 0 ID=cds-WP_014907929.1;Parent=gene-LI478_RS17850;Dbxref=Genbank:WP_014907929.1;Name=WP_014907929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225783.1;locus_tag=LI478_RS17850;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_014907929.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3653745 3654434 . + . ID=gene-LI478_RS17855;Name=mtnC;gbkey=Gene;gene=mtnC;gene_biotype=protein_coding;locus_tag=LI478_RS17855 NZ_CP085478.1 Protein Homology CDS 3653745 3654434 . + 0 ID=cds-WP_004142397.1;Parent=gene-LI478_RS17855;Dbxref=Genbank:WP_004142397.1;Name=WP_004142397.1;Ontology_term=GO:0019509,GO:0016791,GO:0016862;gbkey=CDS;gene=mtnC;go_function=phosphatase activity|0016791||IEA,intramolecular oxidoreductase activity%2C interconverting keto- and enol-groups|0016862||IEA;go_process=L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225782.1;locus_tag=LI478_RS17855;product=acireductone synthase;protein_id=WP_004142397.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3654431 3654973 . + . ID=gene-LI478_RS17860;Name=LI478_RS17860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS17860 NZ_CP085478.1 Protein Homology CDS 3654431 3654973 . + 0 ID=cds-WP_002894357.1;Parent=gene-LI478_RS17860;Dbxref=Genbank:WP_002894357.1;Name=WP_002894357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225781.1;locus_tag=LI478_RS17860;product=1%2C2-dihydroxy-3-keto-5-methylthiopentene dioxygenase;protein_id=WP_002894357.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3655081 3657390 . - . ID=gene-LI478_RS17865;Name=LI478_RS17865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS17865 NZ_CP085478.1 Protein Homology CDS 3655081 3657390 . - 0 ID=cds-WP_032414670.1;Parent=gene-LI478_RS17865;Dbxref=Genbank:WP_032414670.1;Name=WP_032414670.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225780.1;locus_tag=LI478_RS17865;product=molybdopterin-dependent oxidoreductase;protein_id=WP_032414670.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3657799 3658779 . + . ID=gene-LI478_RS17870;Name=LI478_RS17870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS17870 NZ_CP085478.1 Protein Homology CDS 3657799 3658779 . + 0 ID=cds-WP_002894353.1;Parent=gene-LI478_RS17870;Dbxref=Genbank:WP_002894353.1;Name=WP_002894353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225779.1;locus_tag=LI478_RS17870;product=sugar ABC transporter substrate-binding protein;protein_id=WP_002894353.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3658824 3660326 . + . ID=gene-LI478_RS17875;Name=LI478_RS17875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS17875 NZ_CP085478.1 Protein Homology CDS 3658824 3660326 . + 0 ID=cds-WP_021441413.1;Parent=gene-LI478_RS17875;Dbxref=Genbank:WP_021441413.1;Name=WP_021441413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225778.1;locus_tag=LI478_RS17875;product=sugar ABC transporter ATP-binding protein;protein_id=WP_021441413.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3660323 3661312 . + . ID=gene-LI478_RS17880;Name=LI478_RS17880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS17880 NZ_CP085478.1 Protein Homology CDS 3660323 3661312 . + 0 ID=cds-WP_021312519.1;Parent=gene-LI478_RS17880;Dbxref=Genbank:WP_021312519.1;Name=WP_021312519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009485204.1;locus_tag=LI478_RS17880;product=ABC transporter permease;protein_id=WP_021312519.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3661309 3662313 . + . ID=gene-LI478_RS17885;Name=LI478_RS17885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS17885 NZ_CP085478.1 Protein Homology CDS 3661309 3662313 . + 0 ID=cds-WP_004223619.1;Parent=gene-LI478_RS17885;Dbxref=Genbank:WP_004223619.1;Name=WP_004223619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225776.1;locus_tag=LI478_RS17885;product=ABC transporter permease;protein_id=WP_004223619.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3662325 3663266 . + . ID=gene-LI478_RS17890;Name=LI478_RS17890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS17890 NZ_CP085478.1 Protein Homology CDS 3662325 3663266 . + 0 ID=cds-WP_022615466.1;Parent=gene-LI478_RS17890;Dbxref=Genbank:WP_022615466.1;Name=WP_022615466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225775.1;locus_tag=LI478_RS17890;product=sugar kinase;protein_id=WP_022615466.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3663309 3664337 . - . ID=gene-LI478_RS17895;Name=LI478_RS17895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS17895 NZ_CP085478.1 Protein Homology CDS 3663309 3664337 . - 0 ID=cds-WP_002894255.1;Parent=gene-LI478_RS17895;Dbxref=Genbank:WP_002894255.1;Name=WP_002894255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225774.1;locus_tag=LI478_RS17895;product=2-hydroxyacid dehydrogenase;protein_id=WP_002894255.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3664334 3665830 . - . ID=gene-LI478_RS17900;Name=LI478_RS17900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS17900 NZ_CP085478.1 Protein Homology CDS 3664334 3665830 . - 0 ID=cds-WP_009485209.1;Parent=gene-LI478_RS17900;Dbxref=Genbank:WP_009485209.1;Name=WP_009485209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225773.1;locus_tag=LI478_RS17900;product=carbohydrate kinase;protein_id=WP_009485209.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3665843 3666451 . - . ID=gene-LI478_RS17905;Name=LI478_RS17905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS17905 NZ_CP085478.1 Protein Homology CDS 3665843 3666451 . - 0 ID=cds-WP_002894164.1;Parent=gene-LI478_RS17905;Dbxref=Genbank:WP_002894164.1;Name=WP_002894164.1;Ontology_term=GO:0019509,GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;go_process=L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225772.1;locus_tag=LI478_RS17905;product=methylthioribulose 1-phosphate dehydratase;protein_id=WP_002894164.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3666903 3668165 . + . ID=gene-LI478_RS17910;Name=codB;gbkey=Gene;gene=codB;gene_biotype=protein_coding;locus_tag=LI478_RS17910 NZ_CP085478.1 Protein Homology CDS 3666903 3668165 . + 0 ID=cds-WP_009485210.1;Parent=gene-LI478_RS17910;Dbxref=Genbank:WP_009485210.1;Name=WP_009485210.1;Ontology_term=GO:0055085,GO:0015209,GO:0016020;gbkey=CDS;gene=codB;go_component=membrane|0016020||IEA;go_function=cytosine transmembrane transporter activity|0015209||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225771.1;locus_tag=LI478_RS17910;product=cytosine permease;protein_id=WP_009485210.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3668162 3669397 . + . ID=gene-LI478_RS17915;Name=LI478_RS17915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS17915 NZ_CP085478.1 Protein Homology CDS 3668162 3669397 . + 0 ID=cds-WP_048331666.1;Parent=gene-LI478_RS17915;Dbxref=Genbank:WP_048331666.1;Name=WP_048331666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225770.1;locus_tag=LI478_RS17915;product=PucR family transcriptional regulator ligand-binding domain-containing protein;protein_id=WP_048331666.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3669394 3670632 . + . ID=gene-LI478_RS17920;Name=codA;gbkey=Gene;gene=codA;gene_biotype=protein_coding;locus_tag=LI478_RS17920 NZ_CP085478.1 Protein Homology CDS 3669394 3670632 . + 0 ID=cds-WP_032411035.1;Parent=gene-LI478_RS17920;Dbxref=Genbank:WP_032411035.1;Name=WP_032411035.1;Ontology_term=GO:0016810;gbkey=CDS;gene=codA;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225769.1;locus_tag=LI478_RS17920;product=cytosine deaminase;protein_id=WP_032411035.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3670778 3671728 . + . ID=gene-LI478_RS17925;Name=LI478_RS17925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS17925 NZ_CP085478.1 Protein Homology CDS 3670778 3671728 . + 0 ID=cds-WP_074185268.1;Parent=gene-LI478_RS17925;Dbxref=Genbank:WP_074185268.1;Name=WP_074185268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225768.1;locus_tag=LI478_RS17925;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_074185268.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3671850 3672659 . + . ID=gene-LI478_RS17930;Name=LI478_RS17930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS17930 NZ_CP085478.1 Protein Homology CDS 3671850 3672659 . + 0 ID=cds-WP_004151655.1;Parent=gene-LI478_RS17930;Dbxref=Genbank:WP_004151655.1;Name=WP_004151655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225767.1;locus_tag=LI478_RS17930;product=inositol monophosphatase;protein_id=WP_004151655.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3672770 3674128 . + . ID=gene-LI478_RS17935;Name=LI478_RS17935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS17935 NZ_CP085478.1 Protein Homology CDS 3672770 3674128 . + 0 ID=cds-WP_025368352.1;Parent=gene-LI478_RS17935;Dbxref=Genbank:WP_025368352.1;Name=WP_025368352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225766.1;locus_tag=LI478_RS17935;product=MFS transporter;protein_id=WP_025368352.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3674154 3675422 . + . ID=gene-LI478_RS17940;Name=LI478_RS17940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS17940 NZ_CP085478.1 Protein Homology CDS 3674154 3675422 . + 0 ID=cds-WP_004176900.1;Parent=gene-LI478_RS17940;Dbxref=Genbank:WP_004176900.1;Name=WP_004176900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225765.1;locus_tag=LI478_RS17940;product=histidine phosphatase family protein;protein_id=WP_004176900.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3675482 3676510 . - . ID=gene-LI478_RS17945;Name=mtnA;gbkey=Gene;gene=mtnA;gene_biotype=protein_coding;locus_tag=LI478_RS17945 NZ_CP085478.1 Protein Homology CDS 3675482 3676510 . - 0 ID=cds-WP_004183373.1;Parent=gene-LI478_RS17945;Dbxref=Genbank:WP_004183373.1;Name=WP_004183373.1;Ontology_term=GO:0019509,GO:0046523;gbkey=CDS;gene=mtnA;go_function=S-methyl-5-thioribose-1-phosphate isomerase activity|0046523||IEA;go_process=L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225764.1;locus_tag=LI478_RS17945;product=S-methyl-5-thioribose-1-phosphate isomerase;protein_id=WP_004183373.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3676612 3677811 . + . ID=gene-LI478_RS17950;Name=mtnK;gbkey=Gene;gene=mtnK;gene_biotype=protein_coding;locus_tag=LI478_RS17950 NZ_CP085478.1 Protein Homology CDS 3676612 3677811 . + 0 ID=cds-WP_032447410.1;Parent=gene-LI478_RS17950;Dbxref=Genbank:WP_032447410.1;Name=WP_032447410.1;Ontology_term=GO:0019509,GO:0046522;gbkey=CDS;gene=mtnK;go_function=S-methyl-5-thioribose kinase activity|0046522||IEA;go_process=L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225763.1;locus_tag=LI478_RS17950;product=S-methyl-5-thioribose kinase;protein_id=WP_032447410.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3678025 3679266 . - . ID=gene-LI478_RS17955;Name=LI478_RS17955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS17955 NZ_CP085478.1 Protein Homology CDS 3678025 3679266 . - 0 ID=cds-WP_004178989.1;Parent=gene-LI478_RS17955;Dbxref=Genbank:WP_004178989.1;Name=WP_004178989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225760.1;locus_tag=LI478_RS17955;product=LVIVD repeat-containing protein;protein_id=WP_004178989.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3679368 3680432 . - . ID=gene-LI478_RS17960;Name=LI478_RS17960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS17960 NZ_CP085478.1 Protein Homology CDS 3679368 3680432 . - 0 ID=cds-WP_008805596.1;Parent=gene-LI478_RS17960;Dbxref=Genbank:WP_008805596.1;Name=WP_008805596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225759.1;locus_tag=LI478_RS17960;product=sugar ABC transporter substrate-binding protein;protein_id=WP_008805596.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3680453 3681451 . - . ID=gene-LI478_RS17965;Name=LI478_RS17965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS17965 NZ_CP085478.1 Protein Homology CDS 3680453 3681451 . - 0 ID=cds-WP_002894035.1;Parent=gene-LI478_RS17965;Dbxref=Genbank:WP_002894035.1;Name=WP_002894035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225758.1;locus_tag=LI478_RS17965;product=ABC transporter permease;protein_id=WP_002894035.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3681448 3682950 . - . ID=gene-LI478_RS17970;Name=LI478_RS17970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS17970 NZ_CP085478.1 Protein Homology CDS 3681448 3682950 . - 0 ID=cds-WP_023279184.1;Parent=gene-LI478_RS17970;Dbxref=Genbank:WP_023279184.1;Name=WP_023279184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225757.1;locus_tag=LI478_RS17970;product=sugar ABC transporter ATP-binding protein;protein_id=WP_023279184.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3683114 3684202 . + . ID=gene-LI478_RS17975;Name=LI478_RS17975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS17975 NZ_CP085478.1 Protein Homology CDS 3683114 3684202 . + 0 ID=cds-WP_062914493.1;Parent=gene-LI478_RS17975;Dbxref=Genbank:WP_062914493.1;Name=WP_062914493.1;Ontology_term=GO:0016491,GO:0046872;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225756.1;locus_tag=LI478_RS17975;product=oxidoreductase;protein_id=WP_062914493.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3684260 3685003 . + . ID=gene-LI478_RS17980;Name=LI478_RS17980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS17980 NZ_CP085478.1 Protein Homology CDS 3684260 3685003 . + 0 ID=cds-WP_004885764.1;Parent=gene-LI478_RS17980;Dbxref=Genbank:WP_004885764.1;Name=WP_004885764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225755.1;locus_tag=LI478_RS17980;product=3-oxoacyl-ACP reductase FabG;protein_id=WP_004885764.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3685187 3685486 . + . ID=gene-LI478_RS17985;Name=LI478_RS17985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS17985 NZ_CP085478.1 Protein Homology CDS 3685187 3685486 . + 0 ID=cds-WP_004176910.1;Parent=gene-LI478_RS17985;Dbxref=Genbank:WP_004176910.1;Name=WP_004176910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225754.1;locus_tag=LI478_RS17985;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_004176910.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3685461 3685865 . + . ID=gene-LI478_RS17990;Name=LI478_RS17990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS17990 NZ_CP085478.1 Protein Homology CDS 3685461 3685865 . + 0 ID=cds-WP_064153206.1;Parent=gene-LI478_RS17990;Dbxref=Genbank:WP_064153206.1;Name=WP_064153206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225753.1;locus_tag=LI478_RS17990;product=helix-turn-helix transcriptional regulator;protein_id=WP_064153206.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3685862 3686059 . - . ID=gene-LI478_RS17995;Name=LI478_RS17995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS17995 NZ_CP085478.1 Protein Homology CDS 3685862 3686059 . - 0 ID=cds-WP_002893903.1;Parent=gene-LI478_RS17995;Dbxref=Genbank:WP_002893903.1;Name=WP_002893903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904950.1;locus_tag=LI478_RS17995;product=YbdD/YjiX family protein;protein_id=WP_002893903.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3686164 3688269 . - . ID=gene-LI478_RS18000;Name=cstA;gbkey=Gene;gene=cstA;gene_biotype=protein_coding;locus_tag=LI478_RS18000 NZ_CP085478.1 Protein Homology CDS 3686164 3688269 . - 0 ID=cds-WP_023300829.1;Parent=gene-LI478_RS18000;Dbxref=Genbank:WP_023300829.1;Name=WP_023300829.1;Ontology_term=GO:0009267;gbkey=CDS;gene=cstA;go_process=cellular response to starvation|0009267||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225751.1;locus_tag=LI478_RS18000;product=pyruvate/proton symporter CstA;protein_id=WP_023300829.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3688626 3689039 . - . ID=gene-LI478_RS18005;Name=entH;gbkey=Gene;gene=entH;gene_biotype=protein_coding;locus_tag=LI478_RS18005 NZ_CP085478.1 Protein Homology CDS 3688626 3689039 . - 0 ID=cds-WP_023302190.1;Parent=gene-LI478_RS18005;Dbxref=Genbank:WP_023302190.1;Name=WP_023302190.1;gbkey=CDS;gene=entH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225750.1;locus_tag=LI478_RS18005;product=proofreading thioesterase EntH;protein_id=WP_023302190.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3689040 3689786 . - . ID=gene-LI478_RS18010;Name=entA;gbkey=Gene;gene=entA;gene_biotype=protein_coding;locus_tag=LI478_RS18010 NZ_CP085478.1 Protein Homology CDS 3689040 3689786 . - 0 ID=cds-WP_024622880.1;Parent=gene-LI478_RS18010;Dbxref=Genbank:WP_024622880.1;Name=WP_024622880.1;gbkey=CDS;gene=entA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308662.1;locus_tag=LI478_RS18010;product=2%2C3-dihydro-2%2C3-dihydroxybenzoate dehydrogenase EntA;protein_id=WP_024622880.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3689795 3690646 . - . ID=gene-LI478_RS18015;Name=entB;gbkey=Gene;gene=entB;gene_biotype=protein_coding;locus_tag=LI478_RS18015 NZ_CP085478.1 Protein Homology CDS 3689795 3690646 . - 0 ID=cds-WP_004183356.1;Parent=gene-LI478_RS18015;Dbxref=Genbank:WP_004183356.1;Name=WP_004183356.1;gbkey=CDS;gene=entB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020324582.1;locus_tag=LI478_RS18015;product=enterobactin biosynthesis bifunctional isochorismatase/aryl carrier protein EntB;protein_id=WP_004183356.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3690660 3692267 . - . ID=gene-LI478_RS18020;Name=entE;gbkey=Gene;gene=entE;gene_biotype=protein_coding;locus_tag=LI478_RS18020 NZ_CP085478.1 Protein Homology CDS 3690660 3692267 . - 0 ID=cds-WP_012068426.1;Parent=gene-LI478_RS18020;Dbxref=Genbank:WP_012068426.1;Name=WP_012068426.1;gbkey=CDS;gene=entE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225747.1;locus_tag=LI478_RS18020;product=(2%2C3-dihydroxybenzoyl)adenylate synthase EntE;protein_id=WP_012068426.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3692277 3693452 . - . ID=gene-LI478_RS18025;Name=entC;gbkey=Gene;gene=entC;gene_biotype=protein_coding;locus_tag=LI478_RS18025 NZ_CP085478.1 Protein Homology CDS 3692277 3693452 . - 0 ID=cds-WP_004176916.1;Parent=gene-LI478_RS18025;Dbxref=Genbank:WP_004176916.1;Name=WP_004176916.1;Ontology_term=GO:0008909;gbkey=CDS;gene=entC;go_function=isochorismate synthase activity|0008909||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225746.1;locus_tag=LI478_RS18025;product=isochorismate synthase EntC;protein_id=WP_004176916.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3693641 3694600 . + . ID=gene-LI478_RS18030;Name=fepB;gbkey=Gene;gene=fepB;gene_biotype=protein_coding;locus_tag=LI478_RS18030 NZ_CP085478.1 Protein Homology CDS 3693641 3694600 . + 0 ID=cds-WP_004147526.1;Parent=gene-LI478_RS18030;Dbxref=Genbank:WP_004147526.1;Name=WP_004147526.1;gbkey=CDS;gene=fepB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225745.1;locus_tag=LI478_RS18030;product=Fe2+-enterobactin ABC transporter substrate-binding protein;protein_id=WP_004147526.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3694862 3696103 . - . ID=gene-LI478_RS18035;Name=entS;gbkey=Gene;gene=entS;gene_biotype=protein_coding;locus_tag=LI478_RS18035 NZ_CP085478.1 Protein Homology CDS 3694862 3696103 . - 0 ID=cds-WP_004147525.1;Parent=gene-LI478_RS18035;Dbxref=Genbank:WP_004147525.1;Name=WP_004147525.1;Ontology_term=GO:0042930,GO:0042931;gbkey=CDS;gene=entS;go_function=enterobactin transmembrane transporter activity|0042931||IEA;go_process=enterobactin transport|0042930||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225744.1;locus_tag=LI478_RS18035;product=enterobactin transporter EntS;protein_id=WP_004147525.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3696216 3697223 . + . ID=gene-LI478_RS18040;Name=fepD;gbkey=Gene;gene=fepD;gene_biotype=protein_coding;locus_tag=LI478_RS18040 NZ_CP085478.1 Protein Homology CDS 3696216 3697223 . + 0 ID=cds-WP_004176917.1;Parent=gene-LI478_RS18040;Dbxref=Genbank:WP_004176917.1;Name=WP_004176917.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;gene=fepD;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225743.1;locus_tag=LI478_RS18040;product=Fe(3+)-siderophore ABC transporter permease;protein_id=WP_004176917.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3697220 3698212 . + . ID=gene-LI478_RS18045;Name=fepG;gbkey=Gene;gene=fepG;gene_biotype=protein_coding;locus_tag=LI478_RS18045 NZ_CP085478.1 Protein Homology CDS 3697220 3698212 . + 0 ID=cds-WP_004147521.1;Parent=gene-LI478_RS18045;Dbxref=Genbank:WP_004147521.1;Name=WP_004147521.1;Ontology_term=GO:0022857;gbkey=CDS;gene=fepG;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225742.1;locus_tag=LI478_RS18045;product=iron-enterobactin ABC transporter permease;protein_id=WP_004147521.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3698209 3699003 . + . ID=gene-LI478_RS18050;Name=fepC;gbkey=Gene;gene=fepC;gene_biotype=protein_coding;locus_tag=LI478_RS18050 NZ_CP085478.1 Protein Homology CDS 3698209 3699003 . + 0 ID=cds-WP_002893737.1;Parent=gene-LI478_RS18050;Dbxref=Genbank:WP_002893737.1;Name=WP_002893737.1;Ontology_term=GO:0005524;gbkey=CDS;gene=fepC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225741.1;locus_tag=LI478_RS18050;product=iron-enterobactin ABC transporter ATP-binding protein;protein_id=WP_002893737.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3699068 3702949 . - . ID=gene-LI478_RS18055;Name=entF;gbkey=Gene;gene=entF;gene_biotype=protein_coding;locus_tag=LI478_RS18055 NZ_CP085478.1 Protein Homology CDS 3699068 3702949 . - 0 ID=cds-WP_020803785.1;Parent=gene-LI478_RS18055;Dbxref=Genbank:WP_020803785.1;Name=WP_020803785.1;Ontology_term=GO:0009058,GO:0003824,GO:0031177;gbkey=CDS;gene=entF;go_function=catalytic activity|0003824||IEA,phosphopantetheine binding|0031177||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225740.1;locus_tag=LI478_RS18055;product=enterobactin non-ribosomal peptide synthetase EntF;protein_id=WP_020803785.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3702960 3703163 . - . ID=gene-LI478_RS18060;Name=LI478_RS18060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18060 NZ_CP085478.1 Protein Homology CDS 3702960 3703163 . - 0 ID=cds-WP_004176919.1;Parent=gene-LI478_RS18060;Dbxref=Genbank:WP_004176919.1;Name=WP_004176919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225739.1;locus_tag=LI478_RS18060;product=MbtH family NRPS accessory protein;protein_id=WP_004176919.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3703191 3704399 . - . ID=gene-LI478_RS18065;Name=fes;gbkey=Gene;gene=fes;gene_biotype=protein_coding;locus_tag=LI478_RS18065 NZ_CP085478.1 Protein Homology CDS 3703191 3704399 . - 0 ID=cds-WP_004198313.1;Parent=gene-LI478_RS18065;Dbxref=Genbank:WP_004198313.1;Name=WP_004198313.1;Ontology_term=GO:0005506,GO:0008849;gbkey=CDS;gene=fes;go_function=iron ion binding|0005506||IEA,enterochelin esterase activity|0008849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225738.1;locus_tag=LI478_RS18065;product=enterochelin esterase;protein_id=WP_004198313.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3704659 3706887 . + . ID=gene-LI478_RS18070;Name=fepA;gbkey=Gene;gene=fepA;gene_biotype=protein_coding;locus_tag=LI478_RS18070 NZ_CP085478.1 Protein Homology CDS 3704659 3706887 . + 0 ID=cds-WP_020801576.1;Parent=gene-LI478_RS18070;Dbxref=Genbank:WP_020801576.1;Name=WP_020801576.1;gbkey=CDS;gene=fepA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225737.1;locus_tag=LI478_RS18070;product=siderophore enterobactin receptor FepA;protein_id=WP_020801576.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3706954 3707577 . + . ID=gene-LI478_RS18075;Name=entD;gbkey=Gene;gene=entD;gene_biotype=protein_coding;locus_tag=LI478_RS18075 NZ_CP085478.1 Protein Homology CDS 3706954 3707577 . + 0 ID=cds-WP_020801581.1;Parent=gene-LI478_RS18075;Dbxref=Genbank:WP_020801581.1;Name=WP_020801581.1;Ontology_term=GO:0009239,GO:0000287,GO:0008897,GO:0009366;gbkey=CDS;gene=entD;go_component=enterobactin synthetase complex|0009366||IEA;go_function=magnesium ion binding|0000287||IEA,holo-[acyl-carrier-protein] synthase activity|0008897||IEA;go_process=enterobactin biosynthetic process|0009239||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225736.1;locus_tag=LI478_RS18075;product=enterobactin synthase subunit EntD;protein_id=WP_020801581.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3707629 3708564 . - . ID=gene-LI478_RS18080;Name=LI478_RS18080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18080 NZ_CP085478.1 Protein Homology CDS 3707629 3708564 . - 0 ID=cds-WP_064153201.1;Parent=gene-LI478_RS18080;Dbxref=Genbank:WP_064153201.1;Name=WP_064153201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020801572.1;locus_tag=LI478_RS18080;product=transketolase;protein_id=WP_064153201.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3708557 3709387 . - . ID=gene-LI478_RS18085;Name=LI478_RS18085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18085 NZ_CP085478.1 Protein Homology CDS 3708557 3709387 . - 0 ID=cds-WP_064153199.1;Parent=gene-LI478_RS18085;Dbxref=Genbank:WP_064153199.1;Name=WP_064153199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225734.1;locus_tag=LI478_RS18085;product=transketolase;protein_id=WP_064153199.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3709763 3710713 . + . ID=gene-LI478_RS18090;Name=LI478_RS18090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18090 NZ_CP085478.1 Protein Homology CDS 3709763 3710713 . + 0 ID=cds-WP_002893602.1;Parent=gene-LI478_RS18090;Dbxref=Genbank:WP_002893602.1;Name=WP_002893602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225733.1;locus_tag=LI478_RS18090;product=sugar-binding transcriptional regulator;protein_id=WP_002893602.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3711063 3712583 . + . ID=gene-LI478_RS18095;Name=LI478_RS18095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18095 NZ_CP085478.1 Protein Homology CDS 3711063 3712583 . + 0 ID=cds-WP_064153197.1;Parent=gene-LI478_RS18095;Dbxref=Genbank:WP_064153197.1;Name=WP_064153197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225732.1;locus_tag=LI478_RS18095;product=FGGY-family carbohydrate kinase;protein_id=WP_064153197.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3712743 3713678 . + . ID=gene-LI478_RS18100;Name=LI478_RS18100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18100 NZ_CP085478.1 Protein Homology CDS 3712743 3713678 . + 0 ID=cds-WP_002893597.1;Parent=gene-LI478_RS18100;Dbxref=Genbank:WP_002893597.1;Name=WP_002893597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225731.1;locus_tag=LI478_RS18100;product=D-ribose ABC transporter substrate-binding protein;protein_id=WP_002893597.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3713722 3714342 . + . ID=gene-LI478_RS18105;Name=LI478_RS18105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18105 NZ_CP085478.1 Protein Homology CDS 3713722 3714342 . + 0 ID=cds-WP_002893596.1;Parent=gene-LI478_RS18105;Dbxref=Genbank:WP_002893596.1;Name=WP_002893596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225730.1;locus_tag=LI478_RS18105;product=DUF2291 domain-containing protein;protein_id=WP_002893596.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3714344 3715888 . + . ID=gene-LI478_RS18110;Name=LI478_RS18110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18110 NZ_CP085478.1 Protein Homology CDS 3714344 3715888 . + 0 ID=cds-WP_004176928.1;Parent=gene-LI478_RS18110;Dbxref=Genbank:WP_004176928.1;Name=WP_004176928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225729.1;locus_tag=LI478_RS18110;product=sugar ABC transporter ATP-binding protein;protein_id=WP_004176928.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3715906 3716973 . + . ID=gene-LI478_RS18115;Name=LI478_RS18115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18115 NZ_CP085478.1 Protein Homology CDS 3715906 3716973 . + 0 ID=cds-WP_002893591.1;Parent=gene-LI478_RS18115;Dbxref=Genbank:WP_002893591.1;Name=WP_002893591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225728.1;locus_tag=LI478_RS18115;product=ABC transporter permease;protein_id=WP_002893591.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3717034 3717831 . + . ID=gene-LI478_RS18120;Name=LI478_RS18120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18120 NZ_CP085478.1 Protein Homology CDS 3717034 3717831 . + 0 ID=cds-WP_004191416.1;Parent=gene-LI478_RS18120;Dbxref=Genbank:WP_004191416.1;Name=WP_004191416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225726.1;locus_tag=LI478_RS18120;product=SDR family oxidoreductase;protein_id=WP_004191416.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3718033 3718818 . + . ID=gene-LI478_RS18125;Name=LI478_RS18125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18125 NZ_CP085478.1 Protein Homology CDS 3718033 3718818 . + 0 ID=cds-WP_023286141.1;Parent=gene-LI478_RS18125;Dbxref=Genbank:WP_023286141.1;Name=WP_023286141.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225725.1;locus_tag=LI478_RS18125;product=SDR family oxidoreductase;protein_id=WP_023286141.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3718871 3719476 . - . ID=gene-LI478_RS18130;Name=LI478_RS18130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18130 NZ_CP085478.1 Protein Homology CDS 3718871 3719476 . - 0 ID=cds-WP_004151669.1;Parent=gene-LI478_RS18130;Dbxref=Genbank:WP_004151669.1;Name=WP_004151669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225724.1;locus_tag=LI478_RS18130;product=glutathione S-transferase;protein_id=WP_004151669.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3719731 3720624 . + . ID=gene-LI478_RS18135;Name=LI478_RS18135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18135 NZ_CP085478.1 Protein Homology CDS 3719731 3720624 . + 0 ID=cds-WP_064153195.1;Parent=gene-LI478_RS18135;Dbxref=Genbank:WP_064153195.1;Name=WP_064153195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004142467.1;locus_tag=LI478_RS18135;product=LysR substrate-binding domain-containing protein;protein_id=WP_064153195.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3720621 3721409 . - . ID=gene-LI478_RS18140;Name=LI478_RS18140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18140 NZ_CP085478.1 Protein Homology CDS 3720621 3721409 . - 0 ID=cds-WP_234245373.1;Parent=gene-LI478_RS18140;Dbxref=Genbank:WP_234245373.1;Name=WP_234245373.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF013117.2;locus_tag=LI478_RS18140;product=mechanosensitive ion channel;protein_id=WP_234245373.1;transl_table=11 NZ_CP085478.1 RefSeq pseudogene 3721457 3721877 . - . ID=gene-LI478_RS18145;Name=LI478_RS18145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS18145;pseudo=true NZ_CP085478.1 Protein Homology CDS 3721457 3721877 . - 0 ID=cds-LI478_RS18145;Parent=gene-LI478_RS18145;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225720.1;locus_tag=LI478_RS18145;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP085478.1 RefSeq gene 3722102 3722548 . + . ID=gene-LI478_RS18150;Name=ivy;gbkey=Gene;gene=ivy;gene_biotype=protein_coding;locus_tag=LI478_RS18150 NZ_CP085478.1 Protein Homology CDS 3722102 3722548 . + 0 ID=cds-WP_004178946.1;Parent=gene-LI478_RS18150;Dbxref=Genbank:WP_004178946.1;Name=WP_004178946.1;gbkey=CDS;gene=ivy;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225719.1;locus_tag=LI478_RS18150;product=Ivy family C-type lysozyme inhibitor;protein_id=WP_004178946.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3722594 3724627 . - . ID=gene-LI478_RS18155;Name=betT;gbkey=Gene;gene=betT;gene_biotype=protein_coding;locus_tag=LI478_RS18155 NZ_CP085478.1 Protein Homology CDS 3722594 3724627 . - 0 ID=cds-WP_048331657.1;Parent=gene-LI478_RS18155;Dbxref=Genbank:WP_048331657.1;Name=WP_048331657.1;gbkey=CDS;gene=betT;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225718.1;locus_tag=LI478_RS18155;product=choline BCCT transporter BetT;protein_id=WP_048331657.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3724756 3725343 . + . ID=gene-LI478_RS18160;Name=betI;gbkey=Gene;gene=betI;gene_biotype=protein_coding;locus_tag=LI478_RS18160 NZ_CP085478.1 Protein Homology CDS 3724756 3725343 . + 0 ID=cds-WP_004151671.1;Parent=gene-LI478_RS18160;Dbxref=Genbank:WP_004151671.1;Name=WP_004151671.1;Ontology_term=GO:0003677;gbkey=CDS;gene=betI;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225717.1;locus_tag=LI478_RS18160;product=transcriptional regulator BetI;protein_id=WP_004151671.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3725357 3726829 . + . ID=gene-LI478_RS18165;Name=betB;gbkey=Gene;gene=betB;gene_biotype=protein_coding;locus_tag=LI478_RS18165 NZ_CP085478.1 Protein Homology CDS 3725357 3726829 . + 0 ID=cds-WP_004191424.1;Parent=gene-LI478_RS18165;Dbxref=Genbank:WP_004191424.1;Name=WP_004191424.1;Ontology_term=GO:0019285,GO:0008802,GO:0046872;gbkey=CDS;gene=betB;go_function=betaine-aldehyde dehydrogenase activity|0008802||IEA,metal ion binding|0046872||IEA;go_process=glycine betaine biosynthetic process from choline|0019285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225716.1;locus_tag=LI478_RS18165;product=betaine-aldehyde dehydrogenase;protein_id=WP_004191424.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3726843 3728507 . + . ID=gene-LI478_RS18170;Name=betA;gbkey=Gene;gene=betA;gene_biotype=protein_coding;locus_tag=LI478_RS18170 NZ_CP085478.1 Protein Homology CDS 3726843 3728507 . + 0 ID=cds-WP_004142489.1;Parent=gene-LI478_RS18170;Dbxref=Genbank:WP_004142489.1;Name=WP_004142489.1;Ontology_term=GO:0019285,GO:0008812;gbkey=CDS;gene=betA;go_function=choline dehydrogenase activity|0008812||IEA;go_process=glycine betaine biosynthetic process from choline|0019285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225715.1;locus_tag=LI478_RS18170;product=choline dehydrogenase;protein_id=WP_004142489.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3728628 3729323 . - . ID=gene-LI478_RS18175;Name=LI478_RS18175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18175 NZ_CP085478.1 Protein Homology CDS 3728628 3729323 . - 0 ID=cds-WP_002893466.1;Parent=gene-LI478_RS18175;Dbxref=Genbank:WP_002893466.1;Name=WP_002893466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225714.1;locus_tag=LI478_RS18175;product=GNAT family protein;protein_id=WP_002893466.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3729529 3731097 . + . ID=gene-LI478_RS18180;Name=LI478_RS18180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18180 NZ_CP085478.1 Protein Homology CDS 3729529 3731097 . + 0 ID=cds-WP_021313380.1;Parent=gene-LI478_RS18180;Dbxref=Genbank:WP_021313380.1;Name=WP_021313380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225713.1;locus_tag=LI478_RS18180;product=ABC transporter substrate-binding protein;protein_id=WP_021313380.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3731217 3732239 . + . ID=gene-LI478_RS18185;Name=LI478_RS18185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18185 NZ_CP085478.1 Protein Homology CDS 3731217 3732239 . + 0 ID=cds-WP_064153190.1;Parent=gene-LI478_RS18185;Dbxref=Genbank:WP_064153190.1;Name=WP_064153190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225712.1;locus_tag=LI478_RS18185;product=ABC transporter permease;protein_id=WP_064153190.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3732239 3733072 . + . ID=gene-LI478_RS18190;Name=LI478_RS18190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18190 NZ_CP085478.1 Protein Homology CDS 3732239 3733072 . + 0 ID=cds-WP_064153188.1;Parent=gene-LI478_RS18190;Dbxref=Genbank:WP_064153188.1;Name=WP_064153188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225711.1;locus_tag=LI478_RS18190;product=ABC transporter permease;protein_id=WP_064153188.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3733065 3733901 . + . ID=gene-LI478_RS18195;Name=LI478_RS18195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18195 NZ_CP085478.1 Protein Homology CDS 3733065 3733901 . + 0 ID=cds-WP_064153186.1;Parent=gene-LI478_RS18195;Dbxref=Genbank:WP_064153186.1;Name=WP_064153186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225710.1;locus_tag=LI478_RS18195;product=ABC transporter ATP-binding protein;protein_id=WP_064153186.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3733888 3734592 . + . ID=gene-LI478_RS18200;Name=LI478_RS18200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18200 NZ_CP085478.1 Protein Homology CDS 3733888 3734592 . + 0 ID=cds-WP_009483809.1;Parent=gene-LI478_RS18200;Dbxref=Genbank:WP_009483809.1;Name=WP_009483809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225709.1;locus_tag=LI478_RS18200;product=ABC transporter ATP-binding protein;protein_id=WP_009483809.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3734949 3735944 . + . ID=gene-LI478_RS18205;Name=LI478_RS18205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18205 NZ_CP085478.1 Protein Homology CDS 3734949 3735944 . + 0 ID=cds-WP_064153183.1;Parent=gene-LI478_RS18205;Dbxref=Genbank:WP_064153183.1;Name=WP_064153183.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000484486.1;locus_tag=LI478_RS18205;product=IS110 family transposase;protein_id=WP_064153183.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3736104 3736730 . - . ID=gene-LI478_RS18210;Name=LI478_RS18210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18210 NZ_CP085478.1 Protein Homology CDS 3736104 3736730 . - 0 ID=cds-WP_064153181.1;Parent=gene-LI478_RS18210;Dbxref=Genbank:WP_064153181.1;Name=WP_064153181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377909.1;locus_tag=LI478_RS18210;product=PAS domain-containing protein;protein_id=WP_064153181.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3736943 3737971 . + . ID=gene-LI478_RS18215;Name=LI478_RS18215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18215 NZ_CP085478.1 Protein Homology CDS 3736943 3737971 . + 0 ID=cds-WP_223371731.1;Parent=gene-LI478_RS18215;Dbxref=Genbank:WP_223371731.1;Name=WP_223371731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003113781.1;locus_tag=LI478_RS18215;product=hypothetical protein;protein_id=WP_223371731.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3737973 3739106 . + . ID=gene-LI478_RS18220;Name=LI478_RS18220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18220 NZ_CP085478.1 Protein Homology CDS 3737973 3739106 . + 0 ID=cds-WP_064153177.1;Parent=gene-LI478_RS18220;Dbxref=Genbank:WP_064153177.1;Name=WP_064153177.1;Ontology_term=GO:0009058,GO:0003824,GO:0030170;gbkey=CDS;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010744434.1;locus_tag=LI478_RS18220;product=aminotransferase;protein_id=WP_064153177.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3739205 3739987 . + . ID=gene-LI478_RS18225;Name=LI478_RS18225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18225 NZ_CP085478.1 Protein Homology CDS 3739205 3739987 . + 0 ID=cds-WP_064153175.1;Parent=gene-LI478_RS18225;Dbxref=Genbank:WP_064153175.1;Name=WP_064153175.1;Ontology_term=GO:0015276,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=ligand-gated ion channel activity|0015276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016946877.1;locus_tag=LI478_RS18225;product=lysine/arginine/ornithine ABC transporter substrate-binding protein;protein_id=WP_064153175.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3740053 3741156 . + . ID=gene-LI478_RS18230;Name=LI478_RS18230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18230 NZ_CP085478.1 Protein Homology CDS 3740053 3741156 . + 0 ID=cds-WP_064153173.1;Parent=gene-LI478_RS18230;Dbxref=Genbank:WP_064153173.1;Name=WP_064153173.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016817.2;locus_tag=LI478_RS18230;product=M14 family metallopeptidase;protein_id=WP_064153173.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3741394 3741621 . + . ID=gene-LI478_RS18235;Name=LI478_RS18235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18235 NZ_CP085478.1 Protein Homology CDS 3741394 3741621 . + 0 ID=cds-WP_074185264.1;Parent=gene-LI478_RS18235;Dbxref=Genbank:WP_074185264.1;Name=WP_074185264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012542191.1;locus_tag=LI478_RS18235;product=DUF1737 domain-containing protein;protein_id=WP_074185264.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3742073 3743833 . - . ID=gene-LI478_RS18240;Name=LI478_RS18240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18240 NZ_CP085478.1 Protein Homology CDS 3742073 3743833 . - 0 ID=cds-WP_064153168.1;Parent=gene-LI478_RS18240;Dbxref=Genbank:WP_064153168.1;Name=WP_064153168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012542193.1;locus_tag=LI478_RS18240;product=EAL domain-containing protein;protein_id=WP_064153168.1;transl_table=11 NZ_CP085478.1 RefSeq pseudogene 3744105 3745250 . + . ID=gene-LI478_RS18245;Name=LI478_RS18245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS18245;pseudo=true NZ_CP085478.1 Protein Homology CDS 3744105 3745250 . + 0 ID=cds-LI478_RS18245;Parent=gene-LI478_RS18245;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011872576.1;locus_tag=LI478_RS18245;product=IS30 family transposase;pseudo=true;transl_table=11 NZ_CP085478.1 RefSeq gene 3745648 3746643 . + . ID=gene-LI478_RS18250;Name=LI478_RS18250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18250 NZ_CP085478.1 Protein Homology CDS 3745648 3746643 . + 0 ID=cds-WP_087835731.1;Parent=gene-LI478_RS18250;Dbxref=Genbank:WP_087835731.1;Name=WP_087835731.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000484486.1;locus_tag=LI478_RS18250;product=IS110 family transposase;protein_id=WP_087835731.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3746912 3747658 . - . ID=gene-LI478_RS18255;Name=LI478_RS18255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18255 NZ_CP085478.1 Protein Homology CDS 3746912 3747658 . - 0 ID=cds-WP_064153166.1;Parent=gene-LI478_RS18255;Dbxref=Genbank:WP_064153166.1;Name=WP_064153166.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037890.2;locus_tag=LI478_RS18255;product=HEPN domain-containing protein;protein_id=WP_064153166.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3747731 3748801 . - . ID=gene-LI478_RS18260;Name=LI478_RS18260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18260 NZ_CP085478.1 Protein Homology CDS 3747731 3748801 . - 0 ID=cds-WP_064153164.1;Parent=gene-LI478_RS18260;Dbxref=Genbank:WP_064153164.1;Name=WP_064153164.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015210.2;locus_tag=LI478_RS18260;product=DUF262 domain-containing protein;protein_id=WP_064153164.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3749455 3749592 . + . ID=gene-LI478_RS18265;Name=LI478_RS18265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18265 NZ_CP085478.1 GeneMarkS-2+ CDS 3749455 3749592 . + 0 ID=cds-WP_021441387.1;Parent=gene-LI478_RS18265;Dbxref=Genbank:WP_021441387.1;Name=WP_021441387.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LI478_RS18265;product=hypothetical protein;protein_id=WP_021441387.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3749967 3751304 . - . ID=gene-LI478_RS18270;Name=LI478_RS18270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18270 NZ_CP085478.1 Protein Homology CDS 3749967 3751304 . - 0 ID=cds-WP_064153162.1;Parent=gene-LI478_RS18270;Dbxref=Genbank:WP_064153162.1;Name=WP_064153162.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225707.1;locus_tag=LI478_RS18270;product=aspartate aminotransferase family protein;protein_id=WP_064153162.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3751485 3752249 . + . ID=gene-LI478_RS18275;Name=LI478_RS18275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18275 NZ_CP085478.1 Protein Homology CDS 3751485 3752249 . + 0 ID=cds-WP_004176941.1;Parent=gene-LI478_RS18275;Dbxref=Genbank:WP_004176941.1;Name=WP_004176941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225706.1;locus_tag=LI478_RS18275;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_004176941.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3752303 3753064 . - . ID=gene-LI478_RS18280;Name=LI478_RS18280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18280 NZ_CP085478.1 Protein Homology CDS 3752303 3753064 . - 0 ID=cds-WP_004151676.1;Parent=gene-LI478_RS18280;Dbxref=Genbank:WP_004151676.1;Name=WP_004151676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225705.1;locus_tag=LI478_RS18280;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_004151676.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3753057 3753722 . - . ID=gene-LI478_RS18285;Name=LI478_RS18285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18285 NZ_CP085478.1 Protein Homology CDS 3753057 3753722 . - 0 ID=cds-WP_002893189.1;Parent=gene-LI478_RS18285;Dbxref=Genbank:WP_002893189.1;Name=WP_002893189.1;Note=The N-terminal region of this protein%2C as described by TIGR01726%2C is a three transmembrane segment that identifies a subfamily of ABC transporter permease subunits%2C which specificities that include histidine%2C arginine%2C glutamine%2C glutamate%2C L-cystine (sic)%2C the opines (in Agrobacterium) octopine and nopaline%2C etc.;Ontology_term=GO:0015837,GO:0005886,GO:0055052;gbkey=CDS;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_process=amine transport|0015837||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225704.1;locus_tag=LI478_RS18285;product=ABC transporter permease subunit;protein_id=WP_002893189.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3753737 3754378 . - . ID=gene-LI478_RS18290;Name=LI478_RS18290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18290 NZ_CP085478.1 Protein Homology CDS 3753737 3754378 . - 0 ID=cds-WP_002893187.1;Parent=gene-LI478_RS18290;Dbxref=Genbank:WP_002893187.1;Name=WP_002893187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225703.1;locus_tag=LI478_RS18290;product=amino acid ABC transporter permease;protein_id=WP_002893187.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3754426 3755277 . - . ID=gene-LI478_RS18295;Name=LI478_RS18295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18295 NZ_CP085478.1 Protein Homology CDS 3754426 3755277 . - 0 ID=cds-WP_004176946.1;Parent=gene-LI478_RS18295;Dbxref=Genbank:WP_004176946.1;Name=WP_004176946.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225702.1;locus_tag=LI478_RS18295;product=transporter substrate-binding domain-containing protein;protein_id=WP_004176946.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3755519 3756982 . + . ID=gene-LI478_RS18300;Name=LI478_RS18300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18300 NZ_CP085478.1 Protein Homology CDS 3755519 3756982 . + 0 ID=cds-WP_004191435.1;Parent=gene-LI478_RS18300;Dbxref=Genbank:WP_004191435.1;Name=WP_004191435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225701.1;locus_tag=LI478_RS18300;product=PLP-dependent aminotransferase family protein;protein_id=WP_004191435.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3756979 3758313 . - . ID=gene-LI478_RS18305;Name=LI478_RS18305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18305 NZ_CP085478.1 Protein Homology CDS 3756979 3758313 . - 0 ID=cds-WP_012068408.1;Parent=gene-LI478_RS18305;Dbxref=Genbank:WP_012068408.1;Name=WP_012068408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225700.1;locus_tag=LI478_RS18305;product=PLP-dependent aminotransferase family protein;protein_id=WP_012068408.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3758438 3759346 . + . ID=gene-LI478_RS18310;Name=LI478_RS18310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18310 NZ_CP085478.1 Protein Homology CDS 3758438 3759346 . + 0 ID=cds-WP_049026104.1;Parent=gene-LI478_RS18310;Dbxref=Genbank:WP_049026104.1;Name=WP_049026104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225699.1;locus_tag=LI478_RS18310;product=DMT family transporter;protein_id=WP_049026104.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3759468 3760583 . + . ID=gene-LI478_RS18315;Name=LI478_RS18315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18315 NZ_CP085478.1 Protein Homology CDS 3759468 3760583 . + 0 ID=cds-WP_004176954.1;Parent=gene-LI478_RS18315;Dbxref=Genbank:WP_004176954.1;Name=WP_004176954.1;Ontology_term=GO:0042398,GO:0004357;gbkey=CDS;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=cellular modified amino acid biosynthetic process|0042398||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225698.1;locus_tag=LI478_RS18315;product=YbdK family carboxylate-amine ligase;protein_id=WP_004176954.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3760631 3761350 . + . ID=gene-LI478_RS18320;Name=LI478_RS18320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18320 NZ_CP085478.1 Protein Homology CDS 3760631 3761350 . + 0 ID=cds-WP_004176956.1;Parent=gene-LI478_RS18320;Dbxref=Genbank:WP_004176956.1;Name=WP_004176956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225697.1;locus_tag=LI478_RS18320;product=phosphodiester glycosidase family protein;protein_id=WP_004176956.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3761699 3764791 . - . ID=gene-LI478_RS18325;Name=LI478_RS18325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18325 NZ_CP085478.1 Protein Homology CDS 3761699 3764791 . - 0 ID=cds-WP_064153157.1;Parent=gene-LI478_RS18325;Dbxref=Genbank:WP_064153157.1;Name=WP_064153157.1;Ontology_term=GO:0006810,GO:0015562,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225694.1;locus_tag=LI478_RS18325;product=efflux RND transporter permease subunit;protein_id=WP_064153157.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3764805 3765884 . - . ID=gene-LI478_RS18330;Name=LI478_RS18330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18330 NZ_CP085478.1 Protein Homology CDS 3764805 3765884 . - 0 ID=cds-WP_064153156.1;Parent=gene-LI478_RS18330;Dbxref=Genbank:WP_064153156.1;Name=WP_064153156.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225693.1;locus_tag=LI478_RS18330;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_064153156.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3765937 3768660 . - . ID=gene-LI478_RS18335;Name=LI478_RS18335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18335 NZ_CP085478.1 Protein Homology CDS 3765937 3768660 . - 0 ID=cds-WP_032419261.1;Parent=gene-LI478_RS18335;Dbxref=Genbank:WP_032419261.1;Name=WP_032419261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225692.1;locus_tag=LI478_RS18335;product=cation-transporting P-type ATPase;protein_id=WP_032419261.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3769163 3769411 . + . ID=gene-LI478_RS18340;Name=LI478_RS18340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18340 NZ_CP085478.1 Protein Homology CDS 3769163 3769411 . + 0 ID=cds-WP_002893037.1;Parent=gene-LI478_RS18340;Dbxref=Genbank:WP_002893037.1;Name=WP_002893037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225690.1;locus_tag=LI478_RS18340;product=DUF1158 domain-containing protein;protein_id=WP_002893037.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3769429 3769770 . - . ID=gene-LI478_RS18345;Name=LI478_RS18345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18345 NZ_CP085478.1 Protein Homology CDS 3769429 3769770 . - 0 ID=cds-WP_002893035.1;Parent=gene-LI478_RS18345;Dbxref=Genbank:WP_002893035.1;Name=WP_002893035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225689.1;locus_tag=LI478_RS18345;product=RamA family antibiotic efflux transcriptional regulator;protein_id=WP_002893035.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3769801 3770916 . - . ID=gene-LI478_RS18350;Name=LI478_RS18350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18350 NZ_CP085478.1 Protein Homology CDS 3769801 3770916 . - 0 ID=cds-WP_012737592.1;Parent=gene-LI478_RS18350;Dbxref=Genbank:WP_012737592.1;Name=WP_012737592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225688.1;locus_tag=LI478_RS18350;product=MBL fold metallo-hydrolase;protein_id=WP_012737592.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3771096 3771677 . + . ID=gene-LI478_RS18355;Name=LI478_RS18355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18355 NZ_CP085478.1 Protein Homology CDS 3771096 3771677 . + 0 ID=cds-WP_004176968.1;Parent=gene-LI478_RS18355;Dbxref=Genbank:WP_004176968.1;Name=WP_004176968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004176968.1;locus_tag=LI478_RS18355;product=TetR/AcrR family transcriptional regulator;protein_id=WP_004176968.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3771677 3772045 . + . ID=gene-LI478_RS18360;Name=LI478_RS18360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18360 NZ_CP085478.1 Protein Homology CDS 3771677 3772045 . + 0 ID=cds-WP_004142557.1;Parent=gene-LI478_RS18360;Dbxref=Genbank:WP_004142557.1;Name=WP_004142557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225686.1;locus_tag=LI478_RS18360;product=MmcQ/YjbR family DNA-binding protein;protein_id=WP_004142557.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3772165 3772818 . + . ID=gene-LI478_RS18365;Name=nfsB;gbkey=Gene;gene=nfsB;gene_biotype=protein_coding;locus_tag=LI478_RS18365 NZ_CP085478.1 Protein Homology CDS 3772165 3772818 . + 0 ID=cds-WP_004178896.1;Parent=gene-LI478_RS18365;Dbxref=Genbank:WP_004178896.1;Name=WP_004178896.1;Ontology_term=GO:0016491;gbkey=CDS;gene=nfsB;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225685.1;locus_tag=LI478_RS18365;product=oxygen-insensitive NAD(P)H nitroreductase;protein_id=WP_004178896.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3773066 3773500 . + . ID=gene-LI478_RS18370;Name=LI478_RS18370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18370 NZ_CP085478.1 Protein Homology CDS 3773066 3773500 . + 0 ID=cds-WP_002893017.1;Parent=gene-LI478_RS18370;Dbxref=Genbank:WP_002893017.1;Name=WP_002893017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225684.1;locus_tag=LI478_RS18370;product=PTS sugar transporter subunit IIA;protein_id=WP_002893017.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3773493 3773963 . + . ID=gene-LI478_RS18375;Name=LI478_RS18375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18375 NZ_CP085478.1 Protein Homology CDS 3773493 3773963 . + 0 ID=cds-WP_004176974.1;Parent=gene-LI478_RS18375;Dbxref=Genbank:WP_004176974.1;Name=WP_004176974.1;Ontology_term=GO:0009401,GO:0008982,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225683.1;locus_tag=LI478_RS18375;product=PTS sugar transporter subunit IIB;protein_id=WP_004176974.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3773978 3774721 . + . ID=gene-LI478_RS18380;Name=LI478_RS18380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18380 NZ_CP085478.1 Protein Homology CDS 3773978 3774721 . + 0 ID=cds-WP_004183295.1;Parent=gene-LI478_RS18380;Dbxref=Genbank:WP_004183295.1;Name=WP_004183295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225682.1;locus_tag=LI478_RS18380;product=PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC;protein_id=WP_004183295.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3774724 3775578 . + . ID=gene-LI478_RS18385;Name=LI478_RS18385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18385 NZ_CP085478.1 Protein Homology CDS 3774724 3775578 . + 0 ID=cds-WP_004176976.1;Parent=gene-LI478_RS18385;Dbxref=Genbank:WP_004176976.1;Name=WP_004176976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225681.1;locus_tag=LI478_RS18385;product=PTS system mannose/fructose/sorbose family transporter subunit IID;protein_id=WP_004176976.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3775596 3776657 . + . ID=gene-LI478_RS18390;Name=LI478_RS18390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18390 NZ_CP085478.1 Protein Homology CDS 3775596 3776657 . + 0 ID=cds-WP_004183293.1;Parent=gene-LI478_RS18390;Dbxref=Genbank:WP_004183293.1;Name=WP_004183293.1;Ontology_term=GO:1901135,GO:0097367;gbkey=CDS;go_function=carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225680.1;locus_tag=LI478_RS18390;product=SIS domain-containing protein;protein_id=WP_004183293.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3776722 3777708 . + . ID=gene-LI478_RS18395;Name=LI478_RS18395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18395 NZ_CP085478.1 Protein Homology CDS 3776722 3777708 . + 0 ID=cds-WP_004147471.1;Parent=gene-LI478_RS18395;Dbxref=Genbank:WP_004147471.1;Name=WP_004147471.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225679.1;locus_tag=LI478_RS18395;product=SIS domain-containing protein;protein_id=WP_004147471.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3777761 3780490 . - . ID=gene-LI478_RS18400;Name=LI478_RS18400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18400 NZ_CP085478.1 Protein Homology CDS 3777761 3780490 . - 0 ID=cds-WP_004147470.1;Parent=gene-LI478_RS18400;Dbxref=Genbank:WP_004147470.1;Name=WP_004147470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459563.1;locus_tag=LI478_RS18400;product=sigma-54-dependent transcriptional regulator;protein_id=WP_004147470.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3780587 3781621 . - . ID=gene-LI478_RS18405;Name=LI478_RS18405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18405 NZ_CP085478.1 Protein Homology CDS 3780587 3781621 . - 0 ID=cds-WP_004183291.1;Parent=gene-LI478_RS18405;Dbxref=Genbank:WP_004183291.1;Name=WP_004183291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225676.1;locus_tag=LI478_RS18405;product=DUF2157 domain-containing protein;protein_id=WP_004183291.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3782287 3783153 . - . ID=gene-LI478_RS18410;Name=LI478_RS18410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18410 NZ_CP085478.1 Protein Homology CDS 3782287 3783153 . - 0 ID=cds-WP_004151823.1;Parent=gene-LI478_RS18410;Dbxref=Genbank:WP_004151823.1;Name=WP_004151823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225675.1;locus_tag=LI478_RS18410;product=helix-turn-helix transcriptional regulator;protein_id=WP_004151823.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3783262 3784689 . + . ID=gene-LI478_RS18415;Name=LI478_RS18415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18415 NZ_CP085478.1 Protein Homology CDS 3783262 3784689 . + 0 ID=cds-WP_064148261.1;Parent=gene-LI478_RS18415;Dbxref=Genbank:WP_064148261.1;Name=WP_064148261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225674.1;locus_tag=LI478_RS18415;product=MFS transporter;protein_id=WP_064148261.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3784760 3786004 . + . ID=gene-LI478_RS18420;Name=LI478_RS18420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18420 NZ_CP085478.1 Protein Homology CDS 3784760 3786004 . + 0 ID=cds-WP_004142570.1;Parent=gene-LI478_RS18420;Dbxref=Genbank:WP_004142570.1;Name=WP_004142570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225673.1;locus_tag=LI478_RS18420;product=mechanosensitive ion channel family protein;protein_id=WP_004142570.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3786008 3786988 . - . ID=gene-LI478_RS18425;Name=LI478_RS18425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18425 NZ_CP085478.1 Protein Homology CDS 3786008 3786988 . - 0 ID=cds-WP_004176981.1;Parent=gene-LI478_RS18425;Dbxref=Genbank:WP_004176981.1;Name=WP_004176981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225672.1;locus_tag=LI478_RS18425;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_004176981.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3787250 3787648 . + . ID=gene-LI478_RS18430;Name=LI478_RS18430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18430 NZ_CP085478.1 Protein Homology CDS 3787250 3787648 . + 0 ID=cds-WP_002892937.1;Parent=gene-LI478_RS18430;Dbxref=Genbank:WP_002892937.1;Name=WP_002892937.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225671.1;locus_tag=LI478_RS18430;product=NUDIX domain-containing protein;protein_id=WP_002892937.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3788441 3788947 . + . ID=gene-LI478_RS18435;Name=LI478_RS18435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18435 NZ_CP085478.1 Protein Homology CDS 3788441 3788947 . + 0 ID=cds-WP_187439292.1;Parent=gene-LI478_RS18435;Dbxref=Genbank:WP_187439292.1;Name=WP_187439292.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF012422.2;locus_tag=LI478_RS18435;product=LuxR C-terminal-related transcriptional regulator;protein_id=WP_187439292.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3789018 3789596 . + . ID=gene-LI478_RS18440;Name=LI478_RS18440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18440 NZ_CP085478.1 Protein Homology CDS 3789018 3789596 . + 0 ID=cds-WP_004151820.1;Parent=gene-LI478_RS18440;Dbxref=Genbank:WP_004151820.1;Name=WP_004151820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225668.1;locus_tag=LI478_RS18440;product=fimbrillin MatB;protein_id=WP_004151820.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3789661 3790338 . + . ID=gene-LI478_RS18445;Name=LI478_RS18445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18445 NZ_CP085478.1 Protein Homology CDS 3789661 3790338 . + 0 ID=cds-WP_004152948.1;Parent=gene-LI478_RS18445;Dbxref=Genbank:WP_004152948.1;Name=WP_004152948.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225667.1;locus_tag=LI478_RS18445;product=hypothetical protein;protein_id=WP_004152948.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3790347 3792884 . + . ID=gene-LI478_RS18450;Name=LI478_RS18450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18450 NZ_CP085478.1 Protein Homology CDS 3790347 3792884 . + 0 ID=cds-WP_004153314.1;Parent=gene-LI478_RS18450;Dbxref=Genbank:WP_004153314.1;Name=WP_004153314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225666.1;locus_tag=LI478_RS18450;product=TcfC E-set like domain-containing protein;protein_id=WP_004153314.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3792874 3794493 . + . ID=gene-LI478_RS18455;Name=LI478_RS18455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18455 NZ_CP085478.1 Protein Homology CDS 3792874 3794493 . + 0 ID=cds-WP_004176984.1;Parent=gene-LI478_RS18455;Dbxref=Genbank:WP_004176984.1;Name=WP_004176984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225665.1;locus_tag=LI478_RS18455;product=hypothetical protein;protein_id=WP_004176984.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3794490 3795173 . + . ID=gene-LI478_RS18460;Name=LI478_RS18460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18460 NZ_CP085478.1 Protein Homology CDS 3794490 3795173 . + 0 ID=cds-WP_004153315.1;Parent=gene-LI478_RS18460;Dbxref=Genbank:WP_004153315.1;Name=WP_004153315.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225664.1;locus_tag=LI478_RS18460;product=hypothetical protein;protein_id=WP_004153315.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3795180 3795875 . - . ID=gene-LI478_RS18465;Name=LI478_RS18465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18465 NZ_CP085478.1 Protein Homology CDS 3795180 3795875 . - 0 ID=cds-WP_004228166.1;Parent=gene-LI478_RS18465;Dbxref=Genbank:WP_004228166.1;Name=WP_004228166.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225663.1;locus_tag=LI478_RS18465;product=LuxR C-terminal-related transcriptional regulator;protein_id=WP_004228166.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3796539 3796955 . + . ID=gene-LI478_RS18470;Name=LI478_RS18470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18470 NZ_CP085478.1 Protein Homology CDS 3796539 3796955 . + 0 ID=cds-WP_004151814.1;Parent=gene-LI478_RS18470;Dbxref=Genbank:WP_004151814.1;Name=WP_004151814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225661.1;locus_tag=LI478_RS18470;product=Exc2 family lipoprotein;protein_id=WP_004151814.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3796975 3798126 . - . ID=gene-LI478_RS18475;Name=LI478_RS18475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18475 NZ_CP085478.1 Protein Homology CDS 3796975 3798126 . - 0 ID=cds-WP_004151813.1;Parent=gene-LI478_RS18475;Dbxref=Genbank:WP_004151813.1;Name=WP_004151813.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225660.1;locus_tag=LI478_RS18475;product=Gfo/Idh/MocA family oxidoreductase;protein_id=WP_004151813.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3798128 3799150 . - . ID=gene-LI478_RS18480;Name=LI478_RS18480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18480 NZ_CP085478.1 Protein Homology CDS 3798128 3799150 . - 0 ID=cds-WP_004151812.1;Parent=gene-LI478_RS18480;Dbxref=Genbank:WP_004151812.1;Name=WP_004151812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225659.1;locus_tag=LI478_RS18480;product=sugar phosphate isomerase/epimerase;protein_id=WP_004151812.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3799167 3800372 . - . ID=gene-LI478_RS18485;Name=LI478_RS18485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18485 NZ_CP085478.1 Protein Homology CDS 3799167 3800372 . - 0 ID=cds-WP_004198867.1;Parent=gene-LI478_RS18485;Dbxref=Genbank:WP_004198867.1;Name=WP_004198867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225658.1;locus_tag=LI478_RS18485;product=MFS transporter;protein_id=WP_004198867.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3800560 3801936 . - . ID=gene-LI478_RS18490;Name=pheP;gbkey=Gene;gene=pheP;gene_biotype=protein_coding;locus_tag=LI478_RS18490 NZ_CP085478.1 Protein Homology CDS 3800560 3801936 . - 0 ID=cds-WP_004151811.1;Parent=gene-LI478_RS18490;Dbxref=Genbank:WP_004151811.1;Name=WP_004151811.1;Ontology_term=GO:0006865;gbkey=CDS;gene=pheP;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225657.1;locus_tag=LI478_RS18490;product=phenylalanine transporter;protein_id=WP_004151811.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3802044 3804242 . - . ID=gene-LI478_RS18495;Name=LI478_RS18495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18495 NZ_CP085478.1 Protein Homology CDS 3802044 3804242 . - 0 ID=cds-WP_064153152.1;Parent=gene-LI478_RS18495;Dbxref=Genbank:WP_064153152.1;Name=WP_064153152.1;Ontology_term=GO:0015891,GO:0015343,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_function=siderophore-iron transmembrane transporter activity|0015343||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225656.1;locus_tag=LI478_RS18495;product=TonB-dependent siderophore receptor;protein_id=WP_064153152.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3804302 3805384 . - . ID=gene-LI478_RS18500;Name=LI478_RS18500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18500 NZ_CP085478.1 Protein Homology CDS 3804302 3805384 . - 0 ID=cds-WP_004147457.1;Parent=gene-LI478_RS18500;Dbxref=Genbank:WP_004147457.1;Name=WP_004147457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225655.1;locus_tag=LI478_RS18500;product=YncE family protein;protein_id=WP_004147457.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3805780 3807264 . - . ID=gene-LI478_RS18505;Name=LI478_RS18505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18505 NZ_CP085478.1 Protein Homology CDS 3805780 3807264 . - 0 ID=cds-WP_023312812.1;Parent=gene-LI478_RS18505;Dbxref=Genbank:WP_023312812.1;Name=WP_023312812.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462044.1;locus_tag=LI478_RS18505;product=aldehyde dehydrogenase family protein;protein_id=WP_023312812.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3807423 3808724 . + . ID=gene-LI478_RS18510;Name=LI478_RS18510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18510 NZ_CP085478.1 Protein Homology CDS 3807423 3808724 . + 0 ID=cds-WP_004176990.1;Parent=gene-LI478_RS18510;Dbxref=Genbank:WP_004176990.1;Name=WP_004176990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225653.1;locus_tag=LI478_RS18510;product=FAD-binding oxidoreductase;protein_id=WP_004176990.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3808738 3809103 . + . ID=gene-LI478_RS18515;Name=LI478_RS18515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18515 NZ_CP085478.1 Protein Homology CDS 3808738 3809103 . + 0 ID=cds-WP_042939236.1;Parent=gene-LI478_RS18515;Dbxref=Genbank:WP_042939236.1;Name=WP_042939236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225652.1;locus_tag=LI478_RS18515;product=cupin domain-containing protein;protein_id=WP_042939236.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3809478 3810977 . + . ID=gene-LI478_RS18520;Name=LI478_RS18520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18520 NZ_CP085478.1 Protein Homology CDS 3809478 3810977 . + 0 ID=cds-WP_227394148.1;Parent=gene-LI478_RS18520;Dbxref=Genbank:WP_227394148.1;Name=WP_227394148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225651.1;locus_tag=LI478_RS18520;product=APC family permease;protein_id=WP_227394148.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3810955 3811548 . + . ID=gene-LI478_RS18525;Name=LI478_RS18525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18525 NZ_CP085478.1 Protein Homology CDS 3810955 3811548 . + 0 ID=cds-WP_102007261.1;Parent=gene-LI478_RS18525;Dbxref=Genbank:WP_102007261.1;Name=WP_102007261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225650.1;locus_tag=LI478_RS18525;product=DUF3156 family protein;protein_id=WP_102007261.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3811555 3812670 . - . ID=gene-LI478_RS18530;Name=LI478_RS18530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18530 NZ_CP085478.1 Protein Homology CDS 3811555 3812670 . - 0 ID=cds-WP_004151809.1;Parent=gene-LI478_RS18530;Dbxref=Genbank:WP_004151809.1;Name=WP_004151809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225649.1;locus_tag=LI478_RS18530;product=class II histone deacetylase;protein_id=WP_004151809.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3812687 3813859 . - . ID=gene-LI478_RS18535;Name=LI478_RS18535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18535 NZ_CP085478.1 Protein Homology CDS 3812687 3813859 . - 0 ID=cds-WP_021314077.1;Parent=gene-LI478_RS18535;Dbxref=Genbank:WP_021314077.1;Name=WP_021314077.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225648.1;locus_tag=LI478_RS18535;product=MFS transporter;protein_id=WP_021314077.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3813977 3814660 . - . ID=gene-LI478_RS18540;Name=LI478_RS18540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18540 NZ_CP085478.1 Protein Homology CDS 3813977 3814660 . - 0 ID=cds-WP_002892774.1;Parent=gene-LI478_RS18540;Dbxref=Genbank:WP_002892774.1;Name=WP_002892774.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225647.1;locus_tag=LI478_RS18540;product=LuxR family transcriptional regulator;protein_id=WP_002892774.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3815086 3816273 . + . ID=gene-LI478_RS18545;Name=LI478_RS18545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18545 NZ_CP085478.1 Protein Homology CDS 3815086 3816273 . + 0 ID=cds-WP_023316535.1;Parent=gene-LI478_RS18545;Dbxref=Genbank:WP_023316535.1;Name=WP_023316535.1;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225646.1;locus_tag=LI478_RS18545;product=anaerobic sulfatase maturase;protein_id=WP_023316535.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3816318 3818051 . + . ID=gene-LI478_RS18550;Name=LI478_RS18550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18550 NZ_CP085478.1 Protein Homology CDS 3816318 3818051 . + 0 ID=cds-WP_004223434.1;Parent=gene-LI478_RS18550;Dbxref=Genbank:WP_004223434.1;Name=WP_004223434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225645.1;locus_tag=LI478_RS18550;product=arylsulfatase;protein_id=WP_004223434.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3818139 3818915 . + . ID=gene-LI478_RS18555;Name=LI478_RS18555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18555 NZ_CP085478.1 Protein Homology CDS 3818139 3818915 . + 0 ID=cds-WP_064153146.1;Parent=gene-LI478_RS18555;Dbxref=Genbank:WP_064153146.1;Name=WP_064153146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225644.1;locus_tag=LI478_RS18555;product=SDR family oxidoreductase;protein_id=WP_064153146.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3818941 3819732 . + . ID=gene-LI478_RS18560;Name=LI478_RS18560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18560 NZ_CP085478.1 Protein Homology CDS 3818941 3819732 . + 0 ID=cds-WP_004176998.1;Parent=gene-LI478_RS18560;Dbxref=Genbank:WP_004176998.1;Name=WP_004176998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225643.1;locus_tag=LI478_RS18560;product=MoaF N-terminal domain-containing protein;protein_id=WP_004176998.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3820821 3821774 . - . ID=gene-LI478_RS18565;Name=LI478_RS18565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18565 NZ_CP085478.1 Protein Homology CDS 3820821 3821774 . - 0 ID=cds-WP_004147443.1;Parent=gene-LI478_RS18565;Dbxref=Genbank:WP_004147443.1;Name=WP_004147443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225642.1;locus_tag=LI478_RS18565;product=aldo/keto reductase;protein_id=WP_004147443.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3821903 3822679 . - . ID=gene-LI478_RS18570;Name=LI478_RS18570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18570 NZ_CP085478.1 Protein Homology CDS 3821903 3822679 . - 0 ID=cds-WP_002892707.1;Parent=gene-LI478_RS18570;Dbxref=Genbank:WP_002892707.1;Name=WP_002892707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225641.1;locus_tag=LI478_RS18570;product=ABC transporter substrate-binding protein;protein_id=WP_002892707.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3822699 3823877 . - . ID=gene-LI478_RS18575;Name=LI478_RS18575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18575 NZ_CP085478.1 Protein Homology CDS 3822699 3823877 . - 0 ID=cds-WP_004176999.1;Parent=gene-LI478_RS18575;Dbxref=Genbank:WP_004176999.1;Name=WP_004176999.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225640.1;locus_tag=LI478_RS18575;product=M20 family metallopeptidase;protein_id=WP_004176999.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3824093 3824230 . - . ID=gene-LI478_RS18580;Name=LI478_RS18580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18580 NZ_CP085478.1 Protein Homology CDS 3824093 3824230 . - 0 ID=cds-WP_032415644.1;Parent=gene-LI478_RS18580;Dbxref=Genbank:WP_032415644.1;Name=WP_032415644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225639.1;locus_tag=LI478_RS18580;product=hypothetical protein;protein_id=WP_032415644.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3824193 3824318 . + . ID=gene-LI478_RS18585;Name=LI478_RS18585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18585 NZ_CP085478.1 Protein Homology CDS 3824193 3824318 . + 0 ID=cds-WP_016831715.1;Parent=gene-LI478_RS18585;Dbxref=Genbank:WP_016831715.1;Name=WP_016831715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225638.1;locus_tag=LI478_RS18585;product=hypothetical protein;protein_id=WP_016831715.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3824383 3824838 . - . ID=gene-LI478_RS18590;Name=LI478_RS18590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18590 NZ_CP085478.1 Protein Homology CDS 3824383 3824838 . - 0 ID=cds-WP_032414638.1;Parent=gene-LI478_RS18590;Dbxref=Genbank:WP_032414638.1;Name=WP_032414638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225637.1;locus_tag=LI478_RS18590;product=RcnB family protein;protein_id=WP_032414638.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3825018 3825407 . - . ID=gene-LI478_RS18595;Name=LI478_RS18595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18595 NZ_CP085478.1 Protein Homology CDS 3825018 3825407 . - 0 ID=cds-WP_032414637.1;Parent=gene-LI478_RS18595;Dbxref=Genbank:WP_032414637.1;Name=WP_032414637.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225636.1;locus_tag=LI478_RS18595;product=hypothetical protein;protein_id=WP_032414637.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3825679 3826797 . + . ID=gene-LI478_RS18600;Name=LI478_RS18600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18600 NZ_CP085478.1 Protein Homology CDS 3825679 3826797 . + 0 ID=cds-WP_009308082.1;Parent=gene-LI478_RS18600;Dbxref=Genbank:WP_009308082.1;Name=WP_009308082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225634.1;locus_tag=LI478_RS18600;product=ABC transporter substrate-binding protein;protein_id=WP_009308082.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3826858 3827886 . + . ID=gene-LI478_RS18605;Name=LI478_RS18605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18605 NZ_CP085478.1 Protein Homology CDS 3826858 3827886 . + 0 ID=cds-WP_074421628.1;Parent=gene-LI478_RS18605;Dbxref=Genbank:WP_074421628.1;Name=WP_074421628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225633.1;locus_tag=LI478_RS18605;product=iron ABC transporter permease;protein_id=WP_074421628.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3827883 3828680 . + . ID=gene-LI478_RS18610;Name=LI478_RS18610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18610 NZ_CP085478.1 Protein Homology CDS 3827883 3828680 . + 0 ID=cds-WP_002892698.1;Parent=gene-LI478_RS18610;Dbxref=Genbank:WP_002892698.1;Name=WP_002892698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225632.1;locus_tag=LI478_RS18610;product=ABC transporter ATP-binding protein;protein_id=WP_002892698.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3828721 3829863 . - . ID=gene-LI478_RS18615;Name=LI478_RS18615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18615 NZ_CP085478.1 Protein Homology CDS 3828721 3829863 . - 0 ID=cds-WP_002892697.1;Parent=gene-LI478_RS18615;Dbxref=Genbank:WP_002892697.1;Name=WP_002892697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225631.1;locus_tag=LI478_RS18615;product=HlyD family secretion protein;protein_id=WP_002892697.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3829863 3830207 . - . ID=gene-LI478_RS18620;Name=LI478_RS18620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18620 NZ_CP085478.1 Protein Homology CDS 3829863 3830207 . - 0 ID=cds-WP_002892695.1;Parent=gene-LI478_RS18620;Dbxref=Genbank:WP_002892695.1;Name=WP_002892695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225630.1;locus_tag=LI478_RS18620;product=DUF3302 domain-containing protein;protein_id=WP_002892695.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3830343 3830984 . - . ID=gene-LI478_RS18625;Name=LI478_RS18625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18625 NZ_CP085478.1 Protein Homology CDS 3830343 3830984 . - 0 ID=cds-WP_014599058.1;Parent=gene-LI478_RS18625;Dbxref=Genbank:WP_014599058.1;Name=WP_014599058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225629.1;locus_tag=LI478_RS18625;product=helix-turn-helix domain-containing protein;protein_id=WP_014599058.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3831223 3832146 . + . ID=gene-LI478_RS18630;Name=LI478_RS18630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18630 NZ_CP085478.1 Protein Homology CDS 3831223 3832146 . + 0 ID=cds-WP_004177006.1;Parent=gene-LI478_RS18630;Dbxref=Genbank:WP_004177006.1;Name=WP_004177006.1;Ontology_term=GO:0016301;gbkey=CDS;go_function=kinase activity|0016301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225627.1;locus_tag=LI478_RS18630;product=aminoimidazole riboside kinase;protein_id=WP_004177006.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3832311 3833828 . + . ID=gene-LI478_RS18635;Name=LI478_RS18635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18635 NZ_CP085478.1 Protein Homology CDS 3832311 3833828 . + 0 ID=cds-WP_004147437.1;Parent=gene-LI478_RS18635;Dbxref=Genbank:WP_004147437.1;Name=WP_004147437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225626.1;locus_tag=LI478_RS18635;product=carbohydrate porin;protein_id=WP_004147437.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3833933 3835303 . + . ID=gene-LI478_RS18640;Name=LI478_RS18640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18640 NZ_CP085478.1 Protein Homology CDS 3833933 3835303 . + 0 ID=cds-WP_002892640.1;Parent=gene-LI478_RS18640;Dbxref=Genbank:WP_002892640.1;Name=WP_002892640.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225625.1;locus_tag=LI478_RS18640;product=sucrose-specific PTS transporter subunit IIBC;protein_id=WP_002892640.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3835303 3836703 . + . ID=gene-LI478_RS18645;Name=LI478_RS18645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18645 NZ_CP085478.1 Protein Homology CDS 3835303 3836703 . + 0 ID=cds-WP_048331641.1;Parent=gene-LI478_RS18645;Dbxref=Genbank:WP_048331641.1;Name=WP_048331641.1;Ontology_term=GO:0005975,GO:0004564;gbkey=CDS;go_function=beta-fructofuranosidase activity|0004564||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225624.1;locus_tag=LI478_RS18645;product=sucrose-6-phosphate hydrolase;protein_id=WP_048331641.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3836727 3837737 . + . ID=gene-LI478_RS18650;Name=LI478_RS18650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18650 NZ_CP085478.1 Protein Homology CDS 3836727 3837737 . + 0 ID=cds-WP_014907957.1;Parent=gene-LI478_RS18650;Dbxref=Genbank:WP_014907957.1;Name=WP_014907957.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225623.1;locus_tag=LI478_RS18650;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_014907957.1;transl_table=11 NZ_CP085478.1 RefSeq pseudogene 3837785 3838394 . - . ID=gene-LI478_RS18655;Name=LI478_RS18655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS18655;pseudo=true NZ_CP085478.1 Protein Homology CDS 3837785 3838394 . - 0 ID=cds-LI478_RS18655;Parent=gene-LI478_RS18655;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225622.1;locus_tag=LI478_RS18655;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP085478.1 RefSeq gene 3838578 3839600 . - . ID=gene-LI478_RS18660;Name=LI478_RS18660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18660 NZ_CP085478.1 Protein Homology CDS 3838578 3839600 . - 0 ID=cds-WP_004152946.1;Parent=gene-LI478_RS18660;Dbxref=Genbank:WP_004152946.1;Name=WP_004152946.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225620.1;locus_tag=LI478_RS18660;product=ABC transporter permease;protein_id=WP_004152946.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3839620 3841104 . - . ID=gene-LI478_RS18665;Name=LI478_RS18665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18665 NZ_CP085478.1 Protein Homology CDS 3839620 3841104 . - 0 ID=cds-WP_004142660.1;Parent=gene-LI478_RS18665;Dbxref=Genbank:WP_004142660.1;Name=WP_004142660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225619.1;locus_tag=LI478_RS18665;product=sugar ABC transporter ATP-binding protein;protein_id=WP_004142660.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3841137 3842060 . - . ID=gene-LI478_RS18670;Name=LI478_RS18670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18670 NZ_CP085478.1 Protein Homology CDS 3841137 3842060 . - 0 ID=cds-WP_002892597.1;Parent=gene-LI478_RS18670;Dbxref=Genbank:WP_002892597.1;Name=WP_002892597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225618.1;locus_tag=LI478_RS18670;product=sugar ABC transporter substrate-binding protein;protein_id=WP_002892597.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3842490 3843509 . - . ID=gene-LI478_RS18675;Name=LI478_RS18675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18675 NZ_CP085478.1 Protein Homology CDS 3842490 3843509 . - 0 ID=cds-WP_004151797.1;Parent=gene-LI478_RS18675;Dbxref=Genbank:WP_004151797.1;Name=WP_004151797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225617.1;locus_tag=LI478_RS18675;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_004151797.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3843611 3844618 . + . ID=gene-LI478_RS18680;Name=LI478_RS18680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18680 NZ_CP085478.1 Protein Homology CDS 3843611 3844618 . + 0 ID=cds-WP_004177011.1;Parent=gene-LI478_RS18680;Dbxref=Genbank:WP_004177011.1;Name=WP_004177011.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225616.1;locus_tag=LI478_RS18680;product=Gfo/Idh/MocA family oxidoreductase;protein_id=WP_004177011.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3844953 3846316 . + . ID=gene-LI478_RS18685;Name=LI478_RS18685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18685 NZ_CP085478.1 Protein Homology CDS 3844953 3845421 . + 0 ID=cds-WP_085955203.1-4;Parent=gene-LI478_RS18685;Dbxref=Genbank:WP_085955203.1;Name=WP_085955203.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611151.1;locus_tag=LI478_RS18685;product=IS3-like element ISKpn1 family transposase;protein_id=WP_085955203.1;transl_table=11 NZ_CP085478.1 Protein Homology CDS 3845421 3846316 . + 2 ID=cds-WP_085955203.1-4;Parent=gene-LI478_RS18685;Dbxref=Genbank:WP_085955203.1;Name=WP_085955203.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611151.1;locus_tag=LI478_RS18685;product=IS3-like element ISKpn1 family transposase;protein_id=WP_085955203.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3846868 3847899 . - . ID=gene-LI478_RS18690;Name=LI478_RS18690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18690 NZ_CP085478.1 Protein Homology CDS 3846868 3847899 . - 0 ID=cds-WP_064153252.1;Parent=gene-LI478_RS18690;Dbxref=Genbank:WP_064153252.1;Name=WP_064153252.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225615.1;locus_tag=LI478_RS18690;product=Gfo/Idh/MocA family oxidoreductase;protein_id=WP_064153252.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3847909 3849081 . - . ID=gene-LI478_RS18695;Name=LI478_RS18695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18695 NZ_CP085478.1 Protein Homology CDS 3847909 3849081 . - 0 ID=cds-WP_064153250.1;Parent=gene-LI478_RS18695;Dbxref=Genbank:WP_064153250.1;Name=WP_064153250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225614.1;locus_tag=LI478_RS18695;product=Gfo/Idh/MocA family oxidoreductase;protein_id=WP_064153250.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3849078 3849998 . - . ID=gene-LI478_RS18700;Name=iolE;gbkey=Gene;gene=iolE;gene_biotype=protein_coding;locus_tag=LI478_RS18700 NZ_CP085478.1 Protein Homology CDS 3849078 3849998 . - 0 ID=cds-WP_014907960.1;Parent=gene-LI478_RS18700;Dbxref=Genbank:WP_014907960.1;Name=WP_014907960.1;Ontology_term=GO:0019310,GO:0050114;gbkey=CDS;gene=iolE;go_function=myo-inosose-2 dehydratase activity|0050114||IEA;go_process=inositol catabolic process|0019310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225613.1;locus_tag=LI478_RS18700;product=myo-inosose-2 dehydratase;protein_id=WP_014907960.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3850570 3850995 . + . ID=gene-LI478_RS18705;Name=LI478_RS18705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18705 NZ_CP085478.1 Protein Homology CDS 3850570 3850995 . + 0 ID=cds-WP_032410957.1;Parent=gene-LI478_RS18705;Dbxref=Genbank:WP_032410957.1;Name=WP_032410957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225612.1;locus_tag=LI478_RS18705;product=hypothetical protein;protein_id=WP_032410957.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3851072 3852589 . - . ID=gene-LI478_RS18710;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=LI478_RS18710 NZ_CP085478.1 Protein Homology CDS 3851072 3852589 . - 0 ID=cds-WP_064153249.1;Parent=gene-LI478_RS18710;Dbxref=Genbank:WP_064153249.1;Name=WP_064153249.1;Ontology_term=GO:0006430,GO:0004824,GO:0005737;gbkey=CDS;gene=lysS;go_component=cytoplasm|0005737||IEA;go_function=lysine-tRNA ligase activity|0004824||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001740376.1;locus_tag=LI478_RS18710;product=lysine--tRNA ligase;protein_id=WP_064153249.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3852921 3854396 . - . ID=gene-LI478_RS18715;Name=dtpD;gbkey=Gene;gene=dtpD;gene_biotype=protein_coding;locus_tag=LI478_RS18715 NZ_CP085478.1 Protein Homology CDS 3852921 3854396 . - 0 ID=cds-WP_004151795.1;Parent=gene-LI478_RS18715;Dbxref=Genbank:WP_004151795.1;Name=WP_004151795.1;Ontology_term=GO:0006857,GO:0055085,GO:1904680,GO:0016020;gbkey=CDS;gene=dtpD;go_component=membrane|0016020||IEA;go_function=peptide transmembrane transporter activity|1904680||IEA;go_process=oligopeptide transport|0006857||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225610.1;locus_tag=LI478_RS18715;product=dipeptide permease DtpD;protein_id=WP_004151795.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3854456 3856603 . - . ID=gene-LI478_RS18720;Name=cadA;gbkey=Gene;gene=cadA;gene_biotype=protein_coding;locus_tag=LI478_RS18720 NZ_CP085478.1 Protein Homology CDS 3854456 3856603 . - 0 ID=cds-WP_002892486.1;Parent=gene-LI478_RS18720;Dbxref=Genbank:WP_002892486.1;Name=WP_002892486.1;gbkey=CDS;gene=cadA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225609.1;locus_tag=LI478_RS18720;product=lysine decarboxylase CadA;protein_id=WP_002892486.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3856686 3858020 . - . ID=gene-LI478_RS18725;Name=cadB;gbkey=Gene;gene=cadB;gene_biotype=protein_coding;locus_tag=LI478_RS18725 NZ_CP085478.1 Protein Homology CDS 3856686 3858020 . - 0 ID=cds-WP_002892484.1;Parent=gene-LI478_RS18725;Dbxref=Genbank:WP_002892484.1;Name=WP_002892484.1;Ontology_term=GO:0043872;gbkey=CDS;gene=cadB;go_function=lysine:cadaverine antiporter activity|0043872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225608.1;locus_tag=LI478_RS18725;product=cadaverine/lysine antiporter;protein_id=WP_002892484.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3858386 3859954 . - . ID=gene-LI478_RS18730;Name=cadC;gbkey=Gene;gene=cadC;gene_biotype=protein_coding;locus_tag=LI478_RS18730 NZ_CP085478.1 Protein Homology CDS 3858386 3859954 . - 0 ID=cds-WP_040190463.1;Parent=gene-LI478_RS18730;Dbxref=Genbank:WP_040190463.1;Name=WP_040190463.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=cadC;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225607.1;locus_tag=LI478_RS18730;product=lysine decarboxylation/transport transcriptional activator CadC;protein_id=WP_040190463.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3860248 3860520 . - . ID=gene-LI478_RS18735;Name=LI478_RS18735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18735 NZ_CP085478.1 Protein Homology CDS 3860248 3860520 . - 0 ID=cds-WP_002892402.1;Parent=gene-LI478_RS18735;Dbxref=Genbank:WP_002892402.1;Name=WP_002892402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225606.1;locus_tag=LI478_RS18735;product=DUF1471 domain-containing protein;protein_id=WP_002892402.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3860621 3861541 . - . ID=gene-LI478_RS18740;Name=LI478_RS18740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18740 NZ_CP085478.1 Protein Homology CDS 3860621 3861541 . - 0 ID=cds-WP_002892400.1;Parent=gene-LI478_RS18740;Dbxref=Genbank:WP_002892400.1;Name=WP_002892400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225605.1;locus_tag=LI478_RS18740;product=LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferasee;protein_id=WP_002892400.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3862052 3862918 . + . ID=gene-LI478_RS18745;Name=LI478_RS18745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18745 NZ_CP085478.1 Protein Homology CDS 3862052 3862918 . + 0 ID=cds-WP_004211259.1;Parent=gene-LI478_RS18745;Dbxref=Genbank:WP_004211259.1;Name=WP_004211259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225604.1;locus_tag=LI478_RS18745;product=GNAT family N-acetyltransferase;protein_id=WP_004211259.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3862941 3863966 . - . ID=gene-LI478_RS18750;Name=LI478_RS18750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18750 NZ_CP085478.1 Protein Homology CDS 3862941 3863966 . - 0 ID=cds-WP_004147417.1;Parent=gene-LI478_RS18750;Dbxref=Genbank:WP_004147417.1;Name=WP_004147417.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012635.2;locus_tag=LI478_RS18750;product=fimbrial protein;protein_id=WP_004147417.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3863968 3866403 . - . ID=gene-LI478_RS18755;Name=LI478_RS18755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18755 NZ_CP085478.1 Protein Homology CDS 3863968 3866403 . - 0 ID=cds-WP_064153247.1;Parent=gene-LI478_RS18755;Dbxref=Genbank:WP_064153247.1;Name=WP_064153247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225602.1;locus_tag=LI478_RS18755;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_064153247.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3866414 3867109 . - . ID=gene-LI478_RS18760;Name=LI478_RS18760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18760 NZ_CP085478.1 Protein Homology CDS 3866414 3867109 . - 0 ID=cds-WP_012068380.1;Parent=gene-LI478_RS18760;Dbxref=Genbank:WP_012068380.1;Name=WP_012068380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225601.1;locus_tag=LI478_RS18760;product=molecular chaperone;protein_id=WP_012068380.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3867168 3867728 . - . ID=gene-LI478_RS18765;Name=LI478_RS18765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18765 NZ_CP085478.1 Protein Homology CDS 3867168 3867728 . - 0 ID=cds-WP_004151792.1;Parent=gene-LI478_RS18765;Dbxref=Genbank:WP_004151792.1;Name=WP_004151792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225600.1;locus_tag=LI478_RS18765;product=fimbrial protein;protein_id=WP_004151792.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3868199 3868861 . + . ID=gene-LI478_RS18770;Name=LI478_RS18770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18770 NZ_CP085478.1 Protein Homology CDS 3868199 3868861 . + 0 ID=cds-WP_002892378.1;Parent=gene-LI478_RS18770;Dbxref=Genbank:WP_002892378.1;Name=WP_002892378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225599.1;locus_tag=LI478_RS18770;product=LuxR C-terminal-related transcriptional regulator;protein_id=WP_002892378.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3868839 3869144 . + . ID=gene-LI478_RS18775;Name=LI478_RS18775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18775 NZ_CP085478.1 Protein Homology CDS 3868839 3869144 . + 0 ID=cds-WP_004191501.1;Parent=gene-LI478_RS18775;Dbxref=Genbank:WP_004191501.1;Name=WP_004191501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225598.1;locus_tag=LI478_RS18775;product=hypothetical protein;protein_id=WP_004191501.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3869197 3870501 . - . ID=gene-LI478_RS18780;Name=LI478_RS18780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18780 NZ_CP085478.1 Protein Homology CDS 3869197 3870501 . - 0 ID=cds-WP_004147414.1;Parent=gene-LI478_RS18780;Dbxref=Genbank:WP_004147414.1;Name=WP_004147414.1;Ontology_term=GO:0046912;gbkey=CDS;go_function=acyltransferase activity%2C acyl groups converted into alkyl on transfer|0046912||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225597.1;locus_tag=LI478_RS18780;product=citrate synthase;protein_id=WP_004147414.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3870547 3870687 . - . ID=gene-LI478_RS18785;Name=LI478_RS18785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18785 NZ_CP085478.1 Protein Homology CDS 3870547 3870687 . - 0 ID=cds-WP_032409092.1;Parent=gene-LI478_RS18785;Dbxref=Genbank:WP_032409092.1;Name=WP_032409092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225596.1;locus_tag=LI478_RS18785;product=hypothetical protein;protein_id=WP_032409092.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3871012 3871182 . + . ID=gene-LI478_RS18790;Name=LI478_RS18790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18790 NZ_CP085478.1 Protein Homology CDS 3871012 3871182 . + 0 ID=cds-WP_002892370.1;Parent=gene-LI478_RS18790;Dbxref=Genbank:WP_002892370.1;Name=WP_002892370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225595.1;locus_tag=LI478_RS18790;product=hypothetical protein;protein_id=WP_002892370.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3871261 3871662 . - . ID=gene-LI478_RS18795;Name=uraH;gbkey=Gene;gene=uraH;gene_biotype=protein_coding;locus_tag=LI478_RS18795 NZ_CP085478.1 Protein Homology CDS 3871261 3871662 . - 0 ID=cds-WP_002892366.1;Parent=gene-LI478_RS18795;Dbxref=Genbank:WP_002892366.1;Name=WP_002892366.1;Ontology_term=GO:0019628;gbkey=CDS;gene=uraH;go_process=urate catabolic process|0019628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225594.1;locus_tag=LI478_RS18795;product=hydroxyisourate hydrolase;protein_id=WP_002892366.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3872044 3872583 . + . ID=gene-LI478_RS18800;Name=LI478_RS18800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18800 NZ_CP085478.1 Protein Homology CDS 3872044 3872583 . + 0 ID=cds-WP_016531314.1;Parent=gene-LI478_RS18800;Dbxref=Genbank:WP_016531314.1;Name=WP_016531314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012968793.1;locus_tag=LI478_RS18800;product=hypothetical protein;protein_id=WP_016531314.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3872653 3880695 . - . ID=gene-LI478_RS18805;Name=LI478_RS18805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18805 NZ_CP085478.1 Protein Homology CDS 3872653 3880695 . - 0 ID=cds-WP_064153245.1;Parent=gene-LI478_RS18805;Dbxref=Genbank:WP_064153245.1;Name=WP_064153245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016531315.1;locus_tag=LI478_RS18805;product=hemagglutinin repeat-containing protein;protein_id=WP_064153245.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3880708 3882369 . - . ID=gene-LI478_RS18810;Name=LI478_RS18810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18810 NZ_CP085478.1 Protein Homology CDS 3880708 3882369 . - 0 ID=cds-WP_032414615.1;Parent=gene-LI478_RS18810;Dbxref=Genbank:WP_032414615.1;Name=WP_032414615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015704133.1;locus_tag=LI478_RS18810;product=ShlB/FhaC/HecB family hemolysin secretion/activation protein;protein_id=WP_032414615.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3882656 3882732 . - . ID=gene-LI478_RS18815;Name=LI478_RS18815;gbkey=Gene;gene_biotype=tRNA;locus_tag=LI478_RS18815 NZ_CP085478.1 tRNAscan-SE tRNA 3882656 3882732 . - . ID=rna-LI478_RS18815;Parent=gene-LI478_RS18815;anticodon=(pos:complement(3882696..3882698));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS18815;product=tRNA-Arg NZ_CP085478.1 tRNAscan-SE exon 3882656 3882732 . - . ID=exon-LI478_RS18815-1;Parent=rna-LI478_RS18815;anticodon=(pos:complement(3882696..3882698));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS18815;product=tRNA-Arg NZ_CP085478.1 RefSeq gene 3883071 3883937 . + . ID=gene-LI478_RS18820;Name=folD;gbkey=Gene;gene=folD;gene_biotype=protein_coding;locus_tag=LI478_RS18820 NZ_CP085478.1 Protein Homology CDS 3883071 3883937 . + 0 ID=cds-WP_004143017.1;Parent=gene-LI478_RS18820;Dbxref=Genbank:WP_004143017.1;Name=WP_004143017.1;Ontology_term=GO:0004488;gbkey=CDS;gene=folD;go_function=methylenetetrahydrofolate dehydrogenase (NADP+) activity|0004488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225533.1;locus_tag=LI478_RS18820;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD;protein_id=WP_004143017.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3883939 3884151 . + . ID=gene-LI478_RS18825;Name=ybcJ;gbkey=Gene;gene=ybcJ;gene_biotype=protein_coding;locus_tag=LI478_RS18825 NZ_CP085478.1 Protein Homology CDS 3883939 3884151 . + 0 ID=cds-WP_004143016.1;Parent=gene-LI478_RS18825;Dbxref=Genbank:WP_004143016.1;Name=WP_004143016.1;gbkey=CDS;gene=ybcJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225532.1;locus_tag=LI478_RS18825;product=ribosome-associated protein YbcJ;protein_id=WP_004143016.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3884197 3885582 . - . ID=gene-LI478_RS18830;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=LI478_RS18830 NZ_CP085478.1 Protein Homology CDS 3884197 3885582 . - 0 ID=cds-WP_004143010.1;Parent=gene-LI478_RS18830;Dbxref=Genbank:WP_004143010.1;Name=WP_004143010.1;Ontology_term=GO:0006423,GO:0004817,GO:0005737;gbkey=CDS;gene=cysS;go_component=cytoplasm|0005737||IEA;go_function=cysteine-tRNA ligase activity|0004817||IEA;go_process=cysteinyl-tRNA aminoacylation|0006423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125243.1;locus_tag=LI478_RS18830;product=cysteine--tRNA ligase;protein_id=WP_004143010.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3885758 3886252 . + . ID=gene-LI478_RS18835;Name=ppiB;gbkey=Gene;gene=ppiB;gene_biotype=protein_coding;locus_tag=LI478_RS18835 NZ_CP085478.1 Protein Homology CDS 3885758 3886252 . + 0 ID=cds-WP_004151319.1;Parent=gene-LI478_RS18835;Dbxref=Genbank:WP_004151319.1;Name=WP_004151319.1;gbkey=CDS;gene=ppiB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465360.1;locus_tag=LI478_RS18835;product=peptidylprolyl isomerase B;protein_id=WP_004151319.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3886256 3886978 . + . ID=gene-LI478_RS18840;Name=lpxH;gbkey=Gene;gene=lpxH;gene_biotype=protein_coding;locus_tag=LI478_RS18840 NZ_CP085478.1 Protein Homology CDS 3886256 3886978 . + 0 ID=cds-WP_032432666.1;Parent=gene-LI478_RS18840;Dbxref=Genbank:WP_032432666.1;Name=WP_032432666.1;Ontology_term=GO:0009245,GO:0008758;gbkey=CDS;gene=lpxH;go_function=UDP-2%2C3-diacylglucosamine hydrolase activity|0008758||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225529.1;locus_tag=LI478_RS18840;product=UDP-2%2C3-diacylglucosamine diphosphatase;protein_id=WP_032432666.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3887086 3887424 . + . ID=gene-LI478_RS18845;Name=LI478_RS18845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18845 NZ_CP085478.1 Protein Homology CDS 3887086 3887424 . + 0 ID=cds-WP_032423671.1;Parent=gene-LI478_RS18845;Dbxref=Genbank:WP_032423671.1;Name=WP_032423671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225528.1;locus_tag=LI478_RS18845;product=hypothetical protein;protein_id=WP_032423671.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3887521 3888030 . + . ID=gene-LI478_RS18850;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=LI478_RS18850 NZ_CP085478.1 Protein Homology CDS 3887521 3888030 . + 0 ID=cds-WP_004893772.1;Parent=gene-LI478_RS18850;Dbxref=Genbank:WP_004893772.1;Name=WP_004893772.1;Ontology_term=GO:0009152,GO:0004638,GO:0009320;gbkey=CDS;gene=purE;go_component=phosphoribosylaminoimidazole carboxylase complex|0009320||IEA;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225527.1;locus_tag=LI478_RS18850;product=5-(carboxyamino)imidazole ribonucleotide mutase;protein_id=WP_004893772.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3888027 3889094 . + . ID=gene-LI478_RS18855;Name=purK;gbkey=Gene;gene=purK;gene_biotype=protein_coding;locus_tag=LI478_RS18855 NZ_CP085478.1 Protein Homology CDS 3888027 3889094 . + 0 ID=cds-WP_064153244.1;Parent=gene-LI478_RS18855;Dbxref=Genbank:WP_064153244.1;Name=WP_064153244.1;Ontology_term=GO:0006189,GO:0004638,GO:0005524,GO:0046872;gbkey=CDS;gene=purK;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225526.1;locus_tag=LI478_RS18855;product=5-(carboxyamino)imidazole ribonucleotide synthase;protein_id=WP_064153244.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3889206 3890282 . + . ID=gene-LI478_RS18860;Name=mnmH;gbkey=Gene;gene=mnmH;gene_biotype=protein_coding;locus_tag=LI478_RS18860 NZ_CP085478.1 Protein Homology CDS 3889206 3890282 . + 0 ID=cds-WP_004151323.1;Parent=gene-LI478_RS18860;Dbxref=Genbank:WP_004151323.1;Name=WP_004151323.1;Ontology_term=GO:0002098,GO:0043828;gbkey=CDS;gene=mnmH;go_function=tRNA 2-selenouridine synthase activity|0043828||IEA;go_process=tRNA wobble uridine modification|0002098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225525.1;locus_tag=LI478_RS18860;product=tRNA 2-selenouridine(34) synthase MnmH;protein_id=WP_004151323.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3890390 3891535 . - . ID=gene-LI478_RS18865;Name=LI478_RS18865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18865 NZ_CP085478.1 Protein Homology CDS 3890390 3891535 . - 0 ID=cds-WP_004142997.1;Parent=gene-LI478_RS18865;Dbxref=Genbank:WP_004142997.1;Name=WP_004142997.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225524.1;locus_tag=LI478_RS18865;product=porin;protein_id=WP_004142997.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3891627 3891740 . + . ID=gene-LI478_RS18870;Name=LI478_RS18870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18870 NZ_CP085478.1 Protein Homology CDS 3891627 3891740 . + 0 ID=cds-WP_032428564.1;Parent=gene-LI478_RS18870;Dbxref=Genbank:WP_032428564.1;Name=WP_032428564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225523.1;locus_tag=LI478_RS18870;product=hypothetical protein;protein_id=WP_032428564.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3891717 3894131 . - . ID=gene-LI478_RS18875;Name=LI478_RS18875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18875 NZ_CP085478.1 Protein Homology CDS 3891717 3894131 . - 0 ID=cds-WP_064277226.1;Parent=gene-LI478_RS18875;Dbxref=Genbank:WP_064277226.1;Name=WP_064277226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225522.1;locus_tag=LI478_RS18875;product=ABC transporter permease;protein_id=WP_064277226.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3894128 3894814 . - . ID=gene-LI478_RS18880;Name=LI478_RS18880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18880 NZ_CP085478.1 Protein Homology CDS 3894128 3894814 . - 0 ID=cds-WP_004146399.1;Parent=gene-LI478_RS18880;Dbxref=Genbank:WP_004146399.1;Name=WP_004146399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225521.1;locus_tag=LI478_RS18880;product=ABC transporter ATP-binding protein;protein_id=WP_004146399.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3894785 3895408 . + . ID=gene-LI478_RS18885;Name=tesA;gbkey=Gene;gene=tesA;gene_biotype=protein_coding;locus_tag=LI478_RS18885 NZ_CP085478.1 Protein Homology CDS 3894785 3895408 . + 0 ID=cds-WP_004196998.1;Parent=gene-LI478_RS18885;Dbxref=Genbank:WP_004196998.1;Name=WP_004196998.1;Ontology_term=GO:0006629,GO:0016298;gbkey=CDS;gene=tesA;go_function=lipase activity|0016298||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225520.1;locus_tag=LI478_RS18885;product=multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1;protein_id=WP_004196998.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3895398 3896207 . + . ID=gene-LI478_RS18890;Name=LI478_RS18890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18890 NZ_CP085478.1 Protein Homology CDS 3895398 3896207 . + 0 ID=cds-WP_004191621.1;Parent=gene-LI478_RS18890;Dbxref=Genbank:WP_004191621.1;Name=WP_004191621.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225519.1;locus_tag=LI478_RS18890;product=SDR family oxidoreductase;protein_id=WP_004191621.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3896266 3897120 . + . ID=gene-LI478_RS18895;Name=LI478_RS18895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18895 NZ_CP085478.1 Protein Homology CDS 3896266 3897120 . + 0 ID=cds-WP_002892263.1;Parent=gene-LI478_RS18895;Dbxref=Genbank:WP_002892263.1;Name=WP_002892263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225518.1;locus_tag=LI478_RS18895;product=co-chaperone YbbN;protein_id=WP_002892263.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3897228 3898010 . - . ID=gene-LI478_RS18900;Name=fetB;gbkey=Gene;gene=fetB;gene_biotype=protein_coding;locus_tag=LI478_RS18900 NZ_CP085478.1 Protein Homology CDS 3897228 3898010 . - 0 ID=cds-WP_004177223.1;Parent=gene-LI478_RS18900;Dbxref=Genbank:WP_004177223.1;Name=WP_004177223.1;gbkey=CDS;gene=fetB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225517.1;locus_tag=LI478_RS18900;product=iron export ABC transporter permease subunit FetB;protein_id=WP_004177223.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3897997 3898674 . - . ID=gene-LI478_RS18905;Name=fetA;gbkey=Gene;gene=fetA;gene_biotype=protein_coding;locus_tag=LI478_RS18905 NZ_CP085478.1 Protein Homology CDS 3897997 3898674 . - 0 ID=cds-WP_004177224.1;Parent=gene-LI478_RS18905;Dbxref=Genbank:WP_004177224.1;Name=WP_004177224.1;gbkey=CDS;gene=fetA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225516.1;locus_tag=LI478_RS18905;product=iron ABC transporter ATP-binding protein FetA;protein_id=WP_004177224.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3898815 3899732 . + . ID=gene-LI478_RS18910;Name=LI478_RS18910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18910 NZ_CP085478.1 Protein Homology CDS 3898815 3899732 . + 0 ID=cds-WP_032421072.1;Parent=gene-LI478_RS18910;Dbxref=Genbank:WP_032421072.1;Name=WP_032421072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225515.1;locus_tag=LI478_RS18910;product=SPFH/Band 7/PHB domain protein;protein_id=WP_032421072.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3899729 3900187 . + . ID=gene-LI478_RS18915;Name=LI478_RS18915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18915 NZ_CP085478.1 Protein Homology CDS 3899729 3900187 . + 0 ID=cds-WP_004142979.1;Parent=gene-LI478_RS18915;Dbxref=Genbank:WP_004142979.1;Name=WP_004142979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225514.1;locus_tag=LI478_RS18915;product=NfeD family protein;protein_id=WP_004142979.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3900184 3900594 . - . ID=gene-LI478_RS18920;Name=cueR;gbkey=Gene;gene=cueR;gene_biotype=protein_coding;locus_tag=LI478_RS18920 NZ_CP085478.1 Protein Homology CDS 3900184 3900594 . - 0 ID=cds-WP_002892208.1;Parent=gene-LI478_RS18920;Dbxref=Genbank:WP_002892208.1;Name=WP_002892208.1;gbkey=CDS;gene=cueR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004142976.1;locus_tag=LI478_RS18920;product=Cu(I)-responsive transcriptional regulator;protein_id=WP_002892208.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3900701 3903202 . + . ID=gene-LI478_RS18925;Name=copA;gbkey=Gene;gene=copA;gene_biotype=protein_coding;locus_tag=LI478_RS18925 NZ_CP085478.1 Protein Homology CDS 3900701 3903202 . + 0 ID=cds-WP_032421659.1;Parent=gene-LI478_RS18925;Dbxref=Genbank:WP_032421659.1;Name=WP_032421659.1;Ontology_term=GO:0006812,GO:0019829;gbkey=CDS;gene=copA;go_function=ATPase-coupled cation transmembrane transporter activity|0019829||IEA;go_process=cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004151326.1;locus_tag=LI478_RS18925;product=copper-exporting P-type ATPase CopA;protein_id=WP_032421659.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3903334 3904128 . + . ID=gene-LI478_RS18930;Name=LI478_RS18930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18930 NZ_CP085478.1 Protein Homology CDS 3903334 3904128 . + 0 ID=cds-WP_004151327.1;Parent=gene-LI478_RS18930;Dbxref=Genbank:WP_004151327.1;Name=WP_004151327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225511.1;locus_tag=LI478_RS18930;product=TraB/GumN family protein;protein_id=WP_004151327.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3904331 3904810 . + . ID=gene-LI478_RS18935;Name=ybaK;gbkey=Gene;gene=ybaK;gene_biotype=protein_coding;locus_tag=LI478_RS18935 NZ_CP085478.1 Protein Homology CDS 3904331 3904810 . + 0 ID=cds-WP_002892205.1;Parent=gene-LI478_RS18935;Dbxref=Genbank:WP_002892205.1;Name=WP_002892205.1;Ontology_term=GO:0002161;gbkey=CDS;gene=ybaK;go_function=aminoacyl-tRNA editing activity|0002161||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818871.1;locus_tag=LI478_RS18935;product=Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK;protein_id=WP_002892205.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3904916 3906568 . - . ID=gene-LI478_RS18940;Name=ushA;gbkey=Gene;gene=ushA;gene_biotype=protein_coding;locus_tag=LI478_RS18940 NZ_CP085478.1 Protein Homology CDS 3904916 3906568 . - 0 ID=cds-WP_004191627.1;Parent=gene-LI478_RS18940;Dbxref=Genbank:WP_004191627.1;Name=WP_004191627.1;Ontology_term=GO:0009166,GO:0000166,GO:0016787,GO:0046872;gbkey=CDS;gene=ushA;go_function=nucleotide binding|0000166||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225509.1;locus_tag=LI478_RS18940;product=bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA;protein_id=WP_004191627.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3906838 3908058 . + . ID=gene-LI478_RS18945;Name=LI478_RS18945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18945 NZ_CP085478.1 Protein Homology CDS 3906838 3908058 . + 0 ID=cds-WP_040217364.1;Parent=gene-LI478_RS18945;Dbxref=Genbank:WP_040217364.1;Name=WP_040217364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225508.1;locus_tag=LI478_RS18945;product=MFS transporter;protein_id=WP_040217364.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3908284 3909960 . + . ID=gene-LI478_RS18950;Name=LI478_RS18950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18950 NZ_CP085478.1 Protein Homology CDS 3908284 3909960 . + 0 ID=cds-WP_002892195.1;Parent=gene-LI478_RS18950;Dbxref=Genbank:WP_002892195.1;Name=WP_002892195.1;Ontology_term=GO:0006813,GO:0008324,GO:0015299,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=cation transmembrane transporter activity|0008324||IEA,solute:proton antiporter activity|0015299||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225505.1;locus_tag=LI478_RS18950;product=Kef family K(+) transporter;protein_id=WP_002892195.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3909996 3911300 . - . ID=gene-LI478_RS18955;Name=LI478_RS18955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18955 NZ_CP085478.1 Protein Homology CDS 3909996 3911300 . - 0 ID=cds-WP_002892192.1;Parent=gene-LI478_RS18955;Dbxref=Genbank:WP_002892192.1;Name=WP_002892192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225504.1;locus_tag=LI478_RS18955;product=inosine/guanosine kinase;protein_id=WP_002892192.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3911364 3912326 . - . ID=gene-LI478_RS18960;Name=hemH;gbkey=Gene;gene=hemH;gene_biotype=protein_coding;locus_tag=LI478_RS18960 NZ_CP085478.1 Protein Homology CDS 3911364 3912326 . - 0 ID=cds-WP_002892189.1;Parent=gene-LI478_RS18960;Dbxref=Genbank:WP_002892189.1;Name=WP_002892189.1;Ontology_term=GO:0006779,GO:0004325;gbkey=CDS;gene=hemH;go_function=ferrochelatase activity|0004325||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225503.1;locus_tag=LI478_RS18960;product=ferrochelatase;protein_id=WP_002892189.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3912455 3913099 . - . ID=gene-LI478_RS18965;Name=adk;gbkey=Gene;gene=adk;gene_biotype=protein_coding;locus_tag=LI478_RS18965 NZ_CP085478.1 Protein Homology CDS 3912455 3913099 . - 0 ID=cds-WP_002892184.1;Parent=gene-LI478_RS18965;Dbxref=Genbank:WP_002892184.1;Name=WP_002892184.1;Ontology_term=GO:0006139,GO:0004017,GO:0005524;gbkey=CDS;gene=adk;go_function=adenylate kinase activity|0004017||IEA,ATP binding|0005524||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007706188.1;locus_tag=LI478_RS18965;product=adenylate kinase;protein_id=WP_002892184.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3913322 3915196 . - . ID=gene-LI478_RS18970;Name=htpG;gbkey=Gene;gene=htpG;gene_biotype=protein_coding;locus_tag=LI478_RS18970 NZ_CP085478.1 Protein Homology CDS 3913322 3915196 . - 0 ID=cds-WP_004177228.1;Parent=gene-LI478_RS18970;Dbxref=Genbank:WP_004177228.1;Name=WP_004177228.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887,GO:0051082;gbkey=CDS;gene=htpG;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225501.1;locus_tag=LI478_RS18970;product=molecular chaperone HtpG;protein_id=WP_004177228.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3915308 3915913 . - . ID=gene-LI478_RS18975;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=LI478_RS18975 NZ_CP085478.1 Protein Homology CDS 3915308 3915913 . - 0 ID=cds-WP_002892177.1;Parent=gene-LI478_RS18975;Dbxref=Genbank:WP_002892177.1;Name=WP_002892177.1;Ontology_term=GO:0006281,GO:0006310;gbkey=CDS;gene=recR;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225500.1;locus_tag=LI478_RS18975;product=recombination mediator RecR;protein_id=WP_002892177.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3915913 3916245 . - . ID=gene-LI478_RS18980;Name=LI478_RS18980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18980 NZ_CP085478.1 Protein Homology CDS 3915913 3916245 . - 0 ID=cds-WP_002892173.1;Parent=gene-LI478_RS18980;Dbxref=Genbank:WP_002892173.1;Name=WP_002892173.1;Ontology_term=GO:0008150,GO:0003677,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001364632.1;locus_tag=LI478_RS18980;product=YbaB/EbfC family nucleoid-associated protein;protein_id=WP_002892173.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3916303 3918210 . - . ID=gene-LI478_RS18985;Name=dnaX;gbkey=Gene;gene=dnaX;gene_biotype=protein_coding;locus_tag=LI478_RS18985 NZ_CP085478.1 Protein Homology CDS 3916303 3918210 . - 0 ID=cds-WP_032414606.1;Parent=gene-LI478_RS18985;Dbxref=Genbank:WP_032414606.1;Name=WP_032414606.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0005524,GO:0009360;gbkey=CDS;gene=dnaX;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459479.1;locus_tag=LI478_RS18985;product=DNA polymerase III subunit gamma/tau;protein_id=WP_032414606.1;transl_table=11 NZ_CP085478.1 cmsearch sequence_feature 3916906 3916970 . - . ID=id-LI478_RS18985;Dbxref=RFAM:RF00382;Note=DnaX frameshifting element;gbkey=misc_feature;gene=dnaX;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LI478_RS18985 NZ_CP085478.1 RefSeq gene 3918303 3918854 . - . ID=gene-LI478_RS18990;Name=apt;gbkey=Gene;gene=apt;gene_biotype=protein_coding;locus_tag=LI478_RS18990 NZ_CP085478.1 Protein Homology CDS 3918303 3918854 . - 0 ID=cds-WP_004177230.1;Parent=gene-LI478_RS18990;Dbxref=Genbank:WP_004177230.1;Name=WP_004177230.1;Ontology_term=GO:0006168,GO:0003999;gbkey=CDS;gene=apt;go_function=adenine phosphoribosyltransferase activity|0003999||IEA;go_process=adenine salvage|0006168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125198.1;locus_tag=LI478_RS18990;product=adenine phosphoribosyltransferase;protein_id=WP_004177230.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3919005 3919382 . - . ID=gene-LI478_RS18995;Name=LI478_RS18995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS18995 NZ_CP085478.1 Protein Homology CDS 3919005 3919382 . - 0 ID=cds-WP_002892144.1;Parent=gene-LI478_RS18995;Dbxref=Genbank:WP_002892144.1;Name=WP_002892144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225495.1;locus_tag=LI478_RS18995;product=DUF454 family protein;protein_id=WP_002892144.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3919452 3919979 . + . ID=gene-LI478_RS19000;Name=priC;gbkey=Gene;gene=priC;gene_biotype=protein_coding;locus_tag=LI478_RS19000 NZ_CP085478.1 Protein Homology CDS 3919452 3919979 . + 0 ID=cds-WP_014599050.1;Parent=gene-LI478_RS19000;Dbxref=Genbank:WP_014599050.1;Name=WP_014599050.1;gbkey=CDS;gene=priC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225494.1;locus_tag=LI478_RS19000;product=primosomal replication protein N'';protein_id=WP_014599050.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3919992 3920165 . + . ID=gene-LI478_RS19005;Name=rsmS;gbkey=Gene;gene=rsmS;gene_biotype=protein_coding;locus_tag=LI478_RS19005 NZ_CP085478.1 Protein Homology CDS 3919992 3920165 . + 0 ID=cds-WP_002892136.1;Parent=gene-LI478_RS19005;Dbxref=Genbank:WP_002892136.1;Name=WP_002892136.1;gbkey=CDS;gene=rsmS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225493.1;locus_tag=LI478_RS19005;product=pleiotropic regulatory protein RsmS;protein_id=WP_002892136.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3920233 3921132 . + . ID=gene-LI478_RS19010;Name=LI478_RS19010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19010 NZ_CP085478.1 Protein Homology CDS 3920233 3921132 . + 0 ID=cds-WP_004183208.1;Parent=gene-LI478_RS19010;Dbxref=Genbank:WP_004183208.1;Name=WP_004183208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225492.1;locus_tag=LI478_RS19010;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WP_004183208.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3921168 3924515 . - . ID=gene-LI478_RS19015;Name=mscK;gbkey=Gene;gene=mscK;gene_biotype=protein_coding;locus_tag=LI478_RS19015 NZ_CP085478.1 Protein Homology CDS 3921168 3924515 . - 0 ID=cds-WP_004177234.1;Parent=gene-LI478_RS19015;Dbxref=Genbank:WP_004177234.1;Name=WP_004177234.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscK;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225491.1;locus_tag=LI478_RS19015;product=mechanosensitive channel MscK;protein_id=WP_004177234.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3924646 3925296 . - . ID=gene-LI478_RS19020;Name=acrR;gbkey=Gene;gene=acrR;gene_biotype=protein_coding;locus_tag=LI478_RS19020 NZ_CP085478.1 Protein Homology CDS 3924646 3925296 . - 0 ID=cds-WP_002892080.1;Parent=gene-LI478_RS19020;Dbxref=Genbank:WP_002892080.1;Name=WP_002892080.1;gbkey=CDS;gene=acrR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225490.1;locus_tag=LI478_RS19020;product=multidrug efflux transporter transcriptional repressor AcrR;protein_id=WP_002892080.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3925439 3926632 . + . ID=gene-LI478_RS19025;Name=acrA;gbkey=Gene;gene=acrA;gene_biotype=protein_coding;locus_tag=LI478_RS19025 NZ_CP085478.1 Protein Homology CDS 3925439 3926632 . + 0 ID=cds-WP_002892072.1;Parent=gene-LI478_RS19025;Dbxref=Genbank:WP_002892072.1;Name=WP_002892072.1;gbkey=CDS;gene=acrA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225489.1;locus_tag=LI478_RS19025;product=multidrug efflux RND transporter periplasmic adaptor subunit AcrA;protein_id=WP_002892072.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3926655 3929801 . + . ID=gene-LI478_RS19030;Name=acrB;gbkey=Gene;gene=acrB;gene_biotype=protein_coding;locus_tag=LI478_RS19030 NZ_CP085478.1 Protein Homology CDS 3926655 3929801 . + 0 ID=cds-WP_002892069.1;Parent=gene-LI478_RS19030;Dbxref=Genbank:WP_002892069.1;Name=WP_002892069.1;gbkey=CDS;gene=acrB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225488.1;locus_tag=LI478_RS19030;product=multidrug efflux RND transporter permease subunit AcrB;protein_id=WP_002892069.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3930287 3930661 . + . ID=gene-LI478_RS19035;Name=tomB;gbkey=Gene;gene=tomB;gene_biotype=protein_coding;locus_tag=LI478_RS19035 NZ_CP085478.1 Protein Homology CDS 3930287 3930661 . + 0 ID=cds-WP_002892066.1;Parent=gene-LI478_RS19035;Dbxref=Genbank:WP_002892066.1;Name=WP_002892066.1;gbkey=CDS;gene=tomB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225487.1;locus_tag=LI478_RS19035;product=Hha toxicity modulator TomB;protein_id=WP_002892066.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3930688 3930906 . + . ID=gene-LI478_RS19040;Name=LI478_RS19040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19040 NZ_CP085478.1 Protein Homology CDS 3930688 3930906 . + 0 ID=cds-WP_002892050.1;Parent=gene-LI478_RS19040;Dbxref=Genbank:WP_002892050.1;Name=WP_002892050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225486.1;locus_tag=LI478_RS19040;product=HHA domain-containing protein;protein_id=WP_002892050.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3931065 3931631 . + . ID=gene-LI478_RS19045;Name=maa;gbkey=Gene;gene=maa;gene_biotype=protein_coding;locus_tag=LI478_RS19045 NZ_CP085478.1 Protein Homology CDS 3931065 3931631 . + 0 ID=cds-WP_002892030.1;Parent=gene-LI478_RS19045;Dbxref=Genbank:WP_002892030.1;Name=WP_002892030.1;Ontology_term=GO:0016407;gbkey=CDS;gene=maa;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225485.1;locus_tag=LI478_RS19045;product=maltose O-acetyltransferase;protein_id=WP_002892030.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3931603 3931743 . - . ID=gene-LI478_RS19050;Name=LI478_RS19050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19050 NZ_CP085478.1 Protein Homology CDS 3931603 3931743 . - 0 ID=cds-WP_004147370.1;Parent=gene-LI478_RS19050;Dbxref=Genbank:WP_004147370.1;Name=WP_004147370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225484.1;locus_tag=LI478_RS19050;product=hypothetical protein;protein_id=WP_004147370.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3931764 3932234 . + . ID=gene-LI478_RS19055;Name=LI478_RS19055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19055 NZ_CP085478.1 Protein Homology CDS 3931764 3932234 . + 0 ID=cds-WP_002892026.1;Parent=gene-LI478_RS19055;Dbxref=Genbank:WP_002892026.1;Name=WP_002892026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225483.1;locus_tag=LI478_RS19055;product=YlaC family protein;protein_id=WP_002892026.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3932209 3933660 . - . ID=gene-LI478_RS19060;Name=LI478_RS19060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19060 NZ_CP085478.1 Protein Homology CDS 3932209 3933660 . - 0 ID=cds-WP_002892023.1;Parent=gene-LI478_RS19060;Dbxref=Genbank:WP_002892023.1;Name=WP_002892023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225482.1;locus_tag=LI478_RS19060;product=PLP-dependent aminotransferase family protein;protein_id=WP_002892023.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3933761 3934459 . + . ID=gene-LI478_RS19065;Name=LI478_RS19065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19065 NZ_CP085478.1 Protein Homology CDS 3933761 3934459 . + 0 ID=cds-WP_032414604.1;Parent=gene-LI478_RS19065;Dbxref=Genbank:WP_032414604.1;Name=WP_032414604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225481.1;locus_tag=LI478_RS19065;product=GNAT family protein;protein_id=WP_032414604.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3934456 3934596 . - . ID=gene-LI478_RS19070;Name=ykgO;gbkey=Gene;gene=ykgO;gene_biotype=protein_coding;locus_tag=LI478_RS19070 NZ_CP085478.1 Protein Homology CDS 3934456 3934596 . - 0 ID=cds-WP_002892018.1;Parent=gene-LI478_RS19070;Dbxref=Genbank:WP_002892018.1;Name=WP_002892018.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=ykgO;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459465.1;locus_tag=LI478_RS19070;product=type B 50S ribosomal protein L36;protein_id=WP_002892018.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3934596 3934859 . - . ID=gene-LI478_RS19075;Name=LI478_RS19075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19075 NZ_CP085478.1 Protein Homology CDS 3934596 3934859 . - 0 ID=cds-WP_002892011.1;Parent=gene-LI478_RS19075;Dbxref=Genbank:WP_002892011.1;Name=WP_002892011.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225479.1;locus_tag=LI478_RS19075;product=type B 50S ribosomal protein L31;protein_id=WP_002892011.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3934975 3936045 . - . ID=gene-LI478_RS19080;Name=LI478_RS19080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19080 NZ_CP085478.1 Protein Homology CDS 3934975 3936045 . - 0 ID=cds-WP_002892007.1;Parent=gene-LI478_RS19080;Dbxref=Genbank:WP_002892007.1;Name=WP_002892007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225478.1;locus_tag=LI478_RS19080;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_002892007.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3936316 3937587 . + . ID=gene-LI478_RS19085;Name=LI478_RS19085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19085 NZ_CP085478.1 Protein Homology CDS 3936316 3937587 . + 0 ID=cds-WP_004177240.1;Parent=gene-LI478_RS19085;Dbxref=Genbank:WP_004177240.1;Name=WP_004177240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004177240.1;locus_tag=LI478_RS19085;product=maltoporin;protein_id=WP_004177240.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3937724 3938038 . - . ID=gene-LI478_RS19090;Name=LI478_RS19090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19090 NZ_CP085478.1 Protein Homology CDS 3937724 3938038 . - 0 ID=cds-WP_002892003.1;Parent=gene-LI478_RS19090;Dbxref=Genbank:WP_002892003.1;Name=WP_002892003.1;Ontology_term=GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225475.1;locus_tag=LI478_RS19090;product=glucose PTS transporter subunit EIIB;protein_id=WP_002892003.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3938102 3940159 . - . ID=gene-LI478_RS19095;Name=LI478_RS19095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19095 NZ_CP085478.1 Protein Homology CDS 3938102 3940159 . - 0 ID=cds-WP_032414602.1;Parent=gene-LI478_RS19095;Dbxref=Genbank:WP_032414602.1;Name=WP_032414602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225474.1;locus_tag=LI478_RS19095;product=beta-galactosidase;protein_id=WP_032414602.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3940191 3941393 . - . ID=gene-LI478_RS19100;Name=LI478_RS19100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19100 NZ_CP085478.1 Protein Homology CDS 3940191 3941393 . - 0 ID=cds-WP_009307952.1;Parent=gene-LI478_RS19100;Dbxref=Genbank:WP_009307952.1;Name=WP_009307952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225473.1;locus_tag=LI478_RS19100;product=arabinogalactan endo-beta-1%2C4-galactanase;protein_id=WP_009307952.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3941398 3942249 . - . ID=gene-LI478_RS19105;Name=LI478_RS19105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19105 NZ_CP085478.1 Protein Homology CDS 3941398 3942249 . - 0 ID=cds-WP_000079398.1;Parent=gene-LI478_RS19105;Dbxref=Genbank:WP_000079398.1;Name=WP_000079398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225472.1;locus_tag=LI478_RS19105;product=sugar ABC transporter permease;protein_id=WP_000079398.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3942260 3943567 . - . ID=gene-LI478_RS19110;Name=LI478_RS19110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19110 NZ_CP085478.1 Protein Homology CDS 3942260 3943567 . - 0 ID=cds-WP_004177243.1;Parent=gene-LI478_RS19110;Dbxref=Genbank:WP_004177243.1;Name=WP_004177243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225471.1;locus_tag=LI478_RS19110;product=sugar ABC transporter permease;protein_id=WP_004177243.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3943630 3944862 . - . ID=gene-LI478_RS19115;Name=LI478_RS19115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19115 NZ_CP085478.1 Protein Homology CDS 3943630 3944862 . - 0 ID=cds-WP_002891991.1;Parent=gene-LI478_RS19115;Dbxref=Genbank:WP_002891991.1;Name=WP_002891991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225470.1;locus_tag=LI478_RS19115;product=maltodextrin ABC transporter substrate-binding protein;protein_id=WP_002891991.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3945219 3946328 . + . ID=gene-LI478_RS19120;Name=ugpC;gbkey=Gene;gene=ugpC;gene_biotype=protein_coding;locus_tag=LI478_RS19120 NZ_CP085478.1 Protein Homology CDS 3945219 3946328 . + 0 ID=cds-WP_004213738.1;Parent=gene-LI478_RS19120;Dbxref=Genbank:WP_004213738.1;Name=WP_004213738.1;Ontology_term=GO:0005524,GO:0140359;gbkey=CDS;gene=ugpC;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016243364.1;locus_tag=LI478_RS19120;product=sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC;protein_id=WP_004213738.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3946562 3948121 . + . ID=gene-LI478_RS19125;Name=LI478_RS19125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19125 NZ_CP085478.1 Protein Homology CDS 3946562 3948121 . + 0 ID=cds-WP_009307950.1;Parent=gene-LI478_RS19125;Dbxref=Genbank:WP_009307950.1;Name=WP_009307950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002891987.1;locus_tag=LI478_RS19125;product=EAL domain-containing protein;protein_id=WP_009307950.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3948156 3948428 . - . ID=gene-LI478_RS19130;Name=LI478_RS19130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19130 NZ_CP085478.1 Protein Homology CDS 3948156 3948428 . - 0 ID=cds-WP_002891985.1;Parent=gene-LI478_RS19130;Dbxref=Genbank:WP_002891985.1;Name=WP_002891985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123385.1;locus_tag=LI478_RS19130;product=metal/formaldehyde-sensitive transcriptional repressor;protein_id=WP_002891985.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3948593 3949420 . + . ID=gene-LI478_RS19135;Name=LI478_RS19135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19135 NZ_CP085478.1 Protein Homology CDS 3948593 3949420 . + 0 ID=cds-WP_064153238.1;Parent=gene-LI478_RS19135;Dbxref=Genbank:WP_064153238.1;Name=WP_064153238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225465.1;locus_tag=LI478_RS19135;product=nickel/cobalt efflux protein RcnA;protein_id=WP_064153238.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3949465 3950079 . - . ID=gene-LI478_RS19140;Name=LI478_RS19140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19140 NZ_CP085478.1 Protein Homology CDS 3949465 3950079 . - 0 ID=cds-WP_004177248.1;Parent=gene-LI478_RS19140;Dbxref=Genbank:WP_004177248.1;Name=WP_004177248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225464.1;locus_tag=LI478_RS19140;product=membrane protein;protein_id=WP_004177248.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3950168 3951595 . + . ID=gene-LI478_RS19145;Name=LI478_RS19145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19145 NZ_CP085478.1 Protein Homology CDS 3950168 3951595 . + 0 ID=cds-WP_048333103.1;Parent=gene-LI478_RS19145;Dbxref=Genbank:WP_048333103.1;Name=WP_048333103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225463.1;locus_tag=LI478_RS19145;product=PLP-dependent aminotransferase family protein;protein_id=WP_048333103.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3951730 3951945 . - . ID=gene-LI478_RS19150;Name=LI478_RS19150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19150 NZ_CP085478.1 Protein Homology CDS 3951730 3951945 . - 0 ID=cds-WP_004142688.1;Parent=gene-LI478_RS19150;Dbxref=Genbank:WP_004142688.1;Name=WP_004142688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225462.1;locus_tag=LI478_RS19150;product=hypothetical protein;protein_id=WP_004142688.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3951942 3952199 . - . ID=gene-LI478_RS19155;Name=LI478_RS19155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19155 NZ_CP085478.1 Protein Homology CDS 3951942 3952199 . - 0 ID=cds-WP_004147352.1;Parent=gene-LI478_RS19155;Dbxref=Genbank:WP_004147352.1;Name=WP_004147352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225461.1;locus_tag=LI478_RS19155;product=hypothetical protein;protein_id=WP_004147352.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3952509 3952605 . - . ID=gene-LI478_RS19160;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=LI478_RS19160 NZ_CP085478.1 cmsearch SRP_RNA 3952509 3952605 . - . ID=rna-LI478_RS19160;Parent=gene-LI478_RS19160;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LI478_RS19160;product=signal recognition particle sRNA small type NZ_CP085478.1 cmsearch exon 3952509 3952605 . - . ID=exon-LI478_RS19160-1;Parent=rna-LI478_RS19160;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LI478_RS19160;product=signal recognition particle sRNA small type NZ_CP085478.1 RefSeq gene 3952846 3953253 . + . ID=gene-LI478_RS19165;Name=LI478_RS19165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19165 NZ_CP085478.1 Protein Homology CDS 3952846 3953253 . + 0 ID=cds-WP_004178755.1;Parent=gene-LI478_RS19165;Dbxref=Genbank:WP_004178755.1;Name=WP_004178755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225460.1;locus_tag=LI478_RS19165;product=dTDP-glucose pyrophosphorylase;protein_id=WP_004178755.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3953321 3953632 . + . ID=gene-LI478_RS19170;Name=LI478_RS19170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19170 NZ_CP085478.1 Protein Homology CDS 3953321 3953632 . + 0 ID=cds-WP_004142687.1;Parent=gene-LI478_RS19170;Dbxref=Genbank:WP_004142687.1;Name=WP_004142687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225459.1;locus_tag=LI478_RS19170;product=MGMT family protein;protein_id=WP_004142687.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3953670 3954161 . - . ID=gene-LI478_RS19175;Name=LI478_RS19175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19175 NZ_CP085478.1 Protein Homology CDS 3953670 3954161 . - 0 ID=cds-WP_002891903.1;Parent=gene-LI478_RS19175;Dbxref=Genbank:WP_002891903.1;Name=WP_002891903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225458.1;locus_tag=LI478_RS19175;product=YbaY family lipoprotein;protein_id=WP_002891903.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3954378 3955241 . + . ID=gene-LI478_RS19180;Name=tesB;gbkey=Gene;gene=tesB;gene_biotype=protein_coding;locus_tag=LI478_RS19180 NZ_CP085478.1 Protein Homology CDS 3954378 3955241 . + 0 ID=cds-WP_002891899.1;Parent=gene-LI478_RS19180;Dbxref=Genbank:WP_002891899.1;Name=WP_002891899.1;gbkey=CDS;gene=tesB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225457.1;locus_tag=LI478_RS19180;product=acyl-CoA thioesterase II;protein_id=WP_002891899.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3955296 3956582 . - . ID=gene-LI478_RS19185;Name=amtB;gbkey=Gene;gene=amtB;gene_biotype=protein_coding;locus_tag=LI478_RS19185 NZ_CP085478.1 Protein Homology CDS 3955296 3956582 . - 0 ID=cds-WP_004152876.1;Parent=gene-LI478_RS19185;Dbxref=Genbank:WP_004152876.1;Name=WP_004152876.1;Ontology_term=GO:0072488,GO:0008519,GO:0005886;gbkey=CDS;gene=amtB;go_component=plasma membrane|0005886||IEA;go_function=ammonium transmembrane transporter activity|0008519||IEA;go_process=ammonium transmembrane transport|0072488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225456.1;locus_tag=LI478_RS19185;product=ammonium transporter AmtB;protein_id=WP_004152876.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3956616 3956954 . - . ID=gene-LI478_RS19190;Name=glnK;gbkey=Gene;gene=glnK;gene_biotype=protein_coding;locus_tag=LI478_RS19190 NZ_CP085478.1 Protein Homology CDS 3956616 3956954 . - 0 ID=cds-WP_002891893.1;Parent=gene-LI478_RS19190;Dbxref=Genbank:WP_002891893.1;Name=WP_002891893.1;Ontology_term=GO:0006808,GO:0030234;gbkey=CDS;gene=glnK;go_function=enzyme regulator activity|0030234||IEA;go_process=regulation of nitrogen utilization|0006808||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225455.1;locus_tag=LI478_RS19190;product=P-II family nitrogen regulator;protein_id=WP_002891893.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3957198 3958976 . - . ID=gene-LI478_RS19195;Name=LI478_RS19195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19195 NZ_CP085478.1 Protein Homology CDS 3957198 3958976 . - 0 ID=cds-WP_002891880.1;Parent=gene-LI478_RS19195;Dbxref=Genbank:WP_002891880.1;Name=WP_002891880.1;Ontology_term=GO:0055085,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225454.1;locus_tag=LI478_RS19195;product=SmdB family multidrug efflux ABC transporter permease/ATP-binding protein;protein_id=WP_002891880.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3958969 3960741 . - . ID=gene-LI478_RS19200;Name=LI478_RS19200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19200 NZ_CP085478.1 Protein Homology CDS 3958969 3960741 . - 0 ID=cds-WP_021312301.1;Parent=gene-LI478_RS19200;Dbxref=Genbank:WP_021312301.1;Name=WP_021312301.1;Ontology_term=GO:0055085,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225453.1;locus_tag=LI478_RS19200;product=SmdA family multidrug ABC transporter permease/ATP-binding protein;protein_id=WP_021312301.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3960785 3961243 . - . ID=gene-LI478_RS19205;Name=LI478_RS19205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19205 NZ_CP085478.1 Protein Homology CDS 3960785 3961243 . - 0 ID=cds-WP_002891873.1;Parent=gene-LI478_RS19205;Dbxref=Genbank:WP_002891873.1;Name=WP_002891873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225452.1;locus_tag=LI478_RS19205;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_002891873.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3961359 3962411 . + . ID=gene-LI478_RS19210;Name=LI478_RS19210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19210 NZ_CP085478.1 Protein Homology CDS 3961359 3962411 . + 0 ID=cds-WP_002891871.1;Parent=gene-LI478_RS19210;Dbxref=Genbank:WP_002891871.1;Name=WP_002891871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225451.1;locus_tag=LI478_RS19210;product=PLP-dependent cysteine synthase family protein;protein_id=WP_002891871.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3962456 3963274 . - . ID=gene-LI478_RS19215;Name=cof;gbkey=Gene;gene=cof;gene_biotype=protein_coding;locus_tag=LI478_RS19215 NZ_CP085478.1 Protein Homology CDS 3962456 3963274 . - 0 ID=cds-WP_004151335.1;Parent=gene-LI478_RS19215;Dbxref=Genbank:WP_004151335.1;Name=WP_004151335.1;Ontology_term=GO:0016818;gbkey=CDS;gene=cof;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225450.1;locus_tag=LI478_RS19215;product=HMP-PP phosphatase;protein_id=WP_004151335.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3963402 3965102 . + . ID=gene-LI478_RS19220;Name=LI478_RS19220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19220 NZ_CP085478.1 Protein Homology CDS 3963402 3965102 . + 0 ID=cds-WP_032414591.1;Parent=gene-LI478_RS19220;Dbxref=Genbank:WP_032414591.1;Name=WP_032414591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225449.1;locus_tag=LI478_RS19220;product=SgrR family transcriptional regulator;protein_id=WP_032414591.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3965169 3965870 . + . ID=gene-LI478_RS19225;Name=queC;gbkey=Gene;gene=queC;gene_biotype=protein_coding;locus_tag=LI478_RS19225 NZ_CP085478.1 Protein Homology CDS 3965169 3965870 . + 0 ID=cds-WP_002891863.1;Parent=gene-LI478_RS19225;Dbxref=Genbank:WP_002891863.1;Name=WP_002891863.1;gbkey=CDS;gene=queC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225448.1;locus_tag=LI478_RS19225;product=7-cyano-7-deazaguanine synthase QueC;protein_id=WP_002891863.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3965982 3966383 . - . ID=gene-LI478_RS19230;Name=LI478_RS19230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19230 NZ_CP085478.1 Protein Homology CDS 3965982 3966383 . - 0 ID=cds-WP_002891860.1;Parent=gene-LI478_RS19230;Dbxref=Genbank:WP_002891860.1;Name=WP_002891860.1;Ontology_term=GO:0047617;gbkey=CDS;go_function=acyl-CoA hydrolase activity|0047617||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225447.1;locus_tag=LI478_RS19230;product=YbgC/FadM family acyl-CoA thioesterase;protein_id=WP_002891860.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3966495 3966863 . - . ID=gene-LI478_RS19235;Name=LI478_RS19235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19235 NZ_CP085478.1 Protein Homology CDS 3966495 3966863 . - 0 ID=cds-WP_002891859.1;Parent=gene-LI478_RS19235;Dbxref=Genbank:WP_002891859.1;Name=WP_002891859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225446.1;locus_tag=LI478_RS19235;product=helix-hairpin-helix domain-containing protein;protein_id=WP_002891859.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3967012 3968886 . - . ID=gene-LI478_RS19240;Name=ppiD;gbkey=Gene;gene=ppiD;gene_biotype=protein_coding;locus_tag=LI478_RS19240 NZ_CP085478.1 Protein Homology CDS 3967012 3968886 . - 0 ID=cds-WP_023284735.1;Parent=gene-LI478_RS19240;Dbxref=Genbank:WP_023284735.1;Name=WP_023284735.1;Ontology_term=GO:0003755;gbkey=CDS;gene=ppiD;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225445.1;locus_tag=LI478_RS19240;product=peptidylprolyl isomerase;protein_id=WP_023284735.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3969101 3969373 . - . ID=gene-LI478_RS19245;Name=hupB;gbkey=Gene;gene=hupB;gene_biotype=protein_coding;locus_tag=LI478_RS19245 NZ_CP085478.1 Protein Homology CDS 3969101 3969373 . - 0 ID=cds-WP_002444653.1;Parent=gene-LI478_RS19245;Dbxref=Genbank:WP_002444653.1;Name=WP_002444653.1;gbkey=CDS;gene=hupB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016535194.1;locus_tag=LI478_RS19245;product=DNA-binding protein HU-beta;protein_id=WP_002444653.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3969583 3971937 . - . ID=gene-LI478_RS19250;Name=lon;gbkey=Gene;gene=lon;gene_biotype=protein_coding;locus_tag=LI478_RS19250 NZ_CP085478.1 Protein Homology CDS 3969583 3971937 . - 0 ID=cds-WP_004151336.1;Parent=gene-LI478_RS19250;Dbxref=Genbank:WP_004151336.1;Name=WP_004151336.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0016887,GO:0043565;gbkey=CDS;gene=lon;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA,ATP hydrolysis activity|0016887||IEA,sequence-specific DNA binding|0043565||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001469947.1;locus_tag=LI478_RS19250;product=endopeptidase La;protein_id=WP_004151336.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3972121 3973395 . - . ID=gene-LI478_RS19255;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=LI478_RS19255 NZ_CP085478.1 Protein Homology CDS 3972121 3973395 . - 0 ID=cds-WP_002891807.1;Parent=gene-LI478_RS19255;Dbxref=Genbank:WP_002891807.1;Name=WP_002891807.1;Ontology_term=GO:0006508,GO:0004252,GO:0005524,GO:0051082,GO:0009368;gbkey=CDS;gene=clpX;go_component=endopeptidase Clp complex|0009368||IEA;go_function=serine-type endopeptidase activity|0004252||IEA,ATP binding|0005524||IEA,unfolded protein binding|0051082||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001396736.1;locus_tag=LI478_RS19255;product=ATP-dependent protease ATP-binding subunit ClpX;protein_id=WP_002891807.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3973646 3974269 . - . ID=gene-LI478_RS19260;Name=clpP;gbkey=Gene;gene=clpP;gene_biotype=protein_coding;locus_tag=LI478_RS19260 NZ_CP085478.1 Protein Homology CDS 3973646 3974269 . - 0 ID=cds-WP_002891804.1;Parent=gene-LI478_RS19260;Dbxref=Genbank:WP_002891804.1;Name=WP_002891804.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0009368;gbkey=CDS;gene=clpP;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006809880.1;locus_tag=LI478_RS19260;product=ATP-dependent Clp endopeptidase proteolytic subunit ClpP;protein_id=WP_002891804.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3974579 3975877 . - . ID=gene-LI478_RS19265;Name=tig;gbkey=Gene;gene=tig;gene_biotype=protein_coding;locus_tag=LI478_RS19265 NZ_CP085478.1 Protein Homology CDS 3974579 3975877 . - 0 ID=cds-WP_004147333.1;Parent=gene-LI478_RS19265;Dbxref=Genbank:WP_004147333.1;Name=WP_004147333.1;Ontology_term=GO:0051083,GO:0003755,GO:0051082,GO:0005854;gbkey=CDS;gene=tig;go_component=nascent polypeptide-associated complex|0005854||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,unfolded protein binding|0051082||IEA;go_process='de novo' cotranslational protein folding|0051083||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001716227.1;locus_tag=LI478_RS19265;product=trigger factor;protein_id=WP_004147333.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3976223 3976540 . - . ID=gene-LI478_RS19270;Name=bolA;gbkey=Gene;gene=bolA;gene_biotype=protein_coding;locus_tag=LI478_RS19270 NZ_CP085478.1 Protein Homology CDS 3976223 3976540 . - 0 ID=cds-WP_002891649.1;Parent=gene-LI478_RS19270;Dbxref=Genbank:WP_002891649.1;Name=WP_002891649.1;gbkey=CDS;gene=bolA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225437.1;locus_tag=LI478_RS19270;product=transcriptional regulator BolA;protein_id=WP_002891649.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3976843 3977421 . + . ID=gene-LI478_RS19275;Name=LI478_RS19275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19275 NZ_CP085478.1 Protein Homology CDS 3976843 3977421 . + 0 ID=cds-WP_002891647.1;Parent=gene-LI478_RS19275;Dbxref=Genbank:WP_002891647.1;Name=WP_002891647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225436.1;locus_tag=LI478_RS19275;product=lipoprotein;protein_id=WP_002891647.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3977465 3978940 . + . ID=gene-LI478_RS19280;Name=ampG;gbkey=Gene;gene=ampG;gene_biotype=protein_coding;locus_tag=LI478_RS19280 NZ_CP085478.1 Protein Homology CDS 3977465 3978940 . + 0 ID=cds-WP_004178749.1;Parent=gene-LI478_RS19280;Dbxref=Genbank:WP_004178749.1;Name=WP_004178749.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=ampG;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225435.1;locus_tag=LI478_RS19280;product=muropeptide MFS transporter AmpG;protein_id=WP_004178749.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3979420 3980364 . + . ID=gene-LI478_RS19285;Name=cyoA;gbkey=Gene;gene=cyoA;gene_biotype=protein_coding;locus_tag=LI478_RS19285 NZ_CP085478.1 Protein Homology CDS 3979420 3980364 . + 0 ID=cds-WP_002891641.1;Parent=gene-LI478_RS19285;Dbxref=Genbank:WP_002891641.1;Name=WP_002891641.1;Ontology_term=GO:0022900,GO:0004129;gbkey=CDS;gene=cyoA;go_function=cytochrome-c oxidase activity|0004129||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414966.1;locus_tag=LI478_RS19285;product=cytochrome o ubiquinol oxidase subunit II;protein_id=WP_002891641.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3980384 3982375 . + . ID=gene-LI478_RS19290;Name=cyoB;gbkey=Gene;gene=cyoB;gene_biotype=protein_coding;locus_tag=LI478_RS19290 NZ_CP085478.1 Protein Homology CDS 3980384 3982375 . + 0 ID=cds-WP_002891638.1;Parent=gene-LI478_RS19290;Dbxref=Genbank:WP_002891638.1;Name=WP_002891638.1;Ontology_term=GO:0004129;gbkey=CDS;gene=cyoB;go_function=cytochrome-c oxidase activity|0004129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002444673.1;locus_tag=LI478_RS19290;product=cytochrome o ubiquinol oxidase subunit I;protein_id=WP_002891638.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3982365 3982976 . + . ID=gene-LI478_RS19295;Name=LI478_RS19295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19295 NZ_CP085478.1 Protein Homology CDS 3982365 3982976 . + 0 ID=cds-WP_002891635.1;Parent=gene-LI478_RS19295;Dbxref=Genbank:WP_002891635.1;Name=WP_002891635.1;Ontology_term=GO:0022904,GO:0004129;gbkey=CDS;go_function=cytochrome-c oxidase activity|0004129||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414964.1;locus_tag=LI478_RS19295;product=cytochrome o ubiquinol oxidase subunit III;protein_id=WP_002891635.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3982976 3983305 . + . ID=gene-LI478_RS19300;Name=LI478_RS19300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19300 NZ_CP085478.1 Protein Homology CDS 3982976 3983305 . + 0 ID=cds-WP_002891634.1;Parent=gene-LI478_RS19300;Dbxref=Genbank:WP_002891634.1;Name=WP_002891634.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225431.1;locus_tag=LI478_RS19300;product=cytochrome o ubiquinol oxidase subunit IV;protein_id=WP_002891634.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3983317 3984204 . + . ID=gene-LI478_RS19305;Name=cyoE;gbkey=Gene;gene=cyoE;gene_biotype=protein_coding;locus_tag=LI478_RS19305 NZ_CP085478.1 Protein Homology CDS 3983317 3984204 . + 0 ID=cds-WP_002891629.1;Parent=gene-LI478_RS19305;Dbxref=Genbank:WP_002891629.1;Name=WP_002891629.1;Ontology_term=GO:0048034,GO:0008495,GO:0016020;gbkey=CDS;gene=cyoE;go_component=membrane|0016020||IEA;go_function=protoheme IX farnesyltransferase activity|0008495||IEA;go_process=heme O biosynthetic process|0048034||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225430.1;locus_tag=LI478_RS19305;product=heme o synthase;protein_id=WP_002891629.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3984454 3984786 . + . ID=gene-LI478_RS19310;Name=LI478_RS19310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19310 NZ_CP085478.1 Protein Homology CDS 3984454 3984786 . + 0 ID=cds-WP_004178748.1;Parent=gene-LI478_RS19310;Dbxref=Genbank:WP_004178748.1;Name=WP_004178748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225429.1;locus_tag=LI478_RS19310;product=hypothetical protein;protein_id=WP_004178748.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3984826 3985584 . - . ID=gene-LI478_RS19315;Name=LI478_RS19315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19315 NZ_CP085478.1 Protein Homology CDS 3984826 3985584 . - 0 ID=cds-WP_002891624.1;Parent=gene-LI478_RS19315;Dbxref=Genbank:WP_002891624.1;Name=WP_002891624.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225428.1;locus_tag=LI478_RS19315;product=helix-turn-helix domain-containing protein;protein_id=WP_002891624.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3985737 3986558 . + . ID=gene-LI478_RS19320;Name=LI478_RS19320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19320 NZ_CP085478.1 Protein Homology CDS 3985737 3986558 . + 0 ID=cds-WP_023284734.1;Parent=gene-LI478_RS19320;Dbxref=Genbank:WP_023284734.1;Name=WP_023284734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225427.1;locus_tag=LI478_RS19320;product=shikimate dehydrogenase;protein_id=WP_023284734.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3986555 3988231 . + . ID=gene-LI478_RS19325;Name=LI478_RS19325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19325 NZ_CP085478.1 Protein Homology CDS 3986555 3988231 . + 0 ID=cds-WP_004223003.1;Parent=gene-LI478_RS19325;Dbxref=Genbank:WP_004223003.1;Name=WP_004223003.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225426.1;locus_tag=LI478_RS19325;product=FAD-dependent oxidoreductase;protein_id=WP_004223003.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3988245 3988565 . + . ID=gene-LI478_RS19330;Name=LI478_RS19330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19330 NZ_CP085478.1 Protein Homology CDS 3988245 3988565 . + 0 ID=cds-WP_002891541.1;Parent=gene-LI478_RS19330;Dbxref=Genbank:WP_002891541.1;Name=WP_002891541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225425.1;locus_tag=LI478_RS19330;product=NIPSNAP family protein;protein_id=WP_002891541.1;transl_table=11 NZ_CP085478.1 RefSeq pseudogene 3988576 3990275 . + . ID=gene-LI478_RS19335;Name=LI478_RS19335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS19335;pseudo=true NZ_CP085478.1 Protein Homology CDS 3988576 3990275 . + 0 ID=cds-LI478_RS19335;Parent=gene-LI478_RS19335;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225424.1;locus_tag=LI478_RS19335;product=FAD-dependent oxidoreductase;pseudo=true;transl_table=11 NZ_CP085478.1 RefSeq gene 3990333 3991151 . + . ID=gene-LI478_RS19340;Name=LI478_RS19340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19340 NZ_CP085478.1 Protein Homology CDS 3990333 3991151 . + 0 ID=cds-WP_227394149.1;Parent=gene-LI478_RS19340;Dbxref=Genbank:WP_227394149.1;Name=WP_227394149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225423.1;locus_tag=LI478_RS19340;product=sugar phosphate isomerase/epimerase;protein_id=WP_227394149.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3991162 3992526 . + . ID=gene-LI478_RS19345;Name=LI478_RS19345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19345 NZ_CP085478.1 Protein Homology CDS 3991162 3992526 . + 0 ID=cds-WP_048978057.1;Parent=gene-LI478_RS19345;Dbxref=Genbank:WP_048978057.1;Name=WP_048978057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225422.1;locus_tag=LI478_RS19345;product=aromatic acid/H+ symport family MFS transporter;protein_id=WP_048978057.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3992857 3994035 . + . ID=gene-LI478_RS19350;Name=LI478_RS19350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19350 NZ_CP085478.1 Protein Homology CDS 3992857 3994035 . + 0 ID=cds-WP_004191717.1;Parent=gene-LI478_RS19350;Dbxref=Genbank:WP_004191717.1;Name=WP_004191717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225421.1;locus_tag=LI478_RS19350;product=Gfo/Idh/MocA family oxidoreductase;protein_id=WP_004191717.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3994194 3995558 . + . ID=gene-LI478_RS19355;Name=LI478_RS19355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19355 NZ_CP085478.1 Protein Homology CDS 3994194 3995558 . + 0 ID=cds-WP_009307931.1;Parent=gene-LI478_RS19355;Dbxref=Genbank:WP_009307931.1;Name=WP_009307931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225420.1;locus_tag=LI478_RS19355;product=MFS transporter;protein_id=WP_009307931.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3995602 3996093 . - . ID=gene-LI478_RS19360;Name=LI478_RS19360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19360 NZ_CP085478.1 Protein Homology CDS 3995602 3996093 . - 0 ID=cds-WP_002891465.1;Parent=gene-LI478_RS19360;Dbxref=Genbank:WP_002891465.1;Name=WP_002891465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225419.1;locus_tag=LI478_RS19360;product=YajQ family cyclic di-GMP-binding protein;protein_id=WP_002891465.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3996285 3997196 . + . ID=gene-LI478_RS19365;Name=panE;gbkey=Gene;gene=panE;gene_biotype=protein_coding;locus_tag=LI478_RS19365 NZ_CP085478.1 Protein Homology CDS 3996285 3997196 . + 0 ID=cds-WP_002891462.1;Parent=gene-LI478_RS19365;Dbxref=Genbank:WP_002891462.1;Name=WP_002891462.1;Ontology_term=GO:0015940,GO:0008677;gbkey=CDS;gene=panE;go_function=2-dehydropantoate 2-reductase activity|0008677||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225418.1;locus_tag=LI478_RS19365;product=2-dehydropantoate 2-reductase;protein_id=WP_002891462.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3997159 3997752 . + . ID=gene-LI478_RS19370;Name=yajL;gbkey=Gene;gene=yajL;gene_biotype=protein_coding;locus_tag=LI478_RS19370 NZ_CP085478.1 Protein Homology CDS 3997159 3997752 . + 0 ID=cds-WP_002891460.1;Parent=gene-LI478_RS19370;Dbxref=Genbank:WP_002891460.1;Name=WP_002891460.1;gbkey=CDS;gene=yajL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225417.1;locus_tag=LI478_RS19370;product=protein deglycase YajL;protein_id=WP_002891460.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3997803 3998279 . + . ID=gene-LI478_RS19375;Name=LI478_RS19375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19375 NZ_CP085478.1 Protein Homology CDS 3997803 3998279 . + 0 ID=cds-WP_004178740.1;Parent=gene-LI478_RS19375;Dbxref=Genbank:WP_004178740.1;Name=WP_004178740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020316526.1;locus_tag=LI478_RS19375;product=SRPBCC family protein;protein_id=WP_004178740.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3998346 3999794 . - . ID=gene-LI478_RS19380;Name=thiI;gbkey=Gene;gene=thiI;gene_biotype=protein_coding;locus_tag=LI478_RS19380 NZ_CP085478.1 Protein Homology CDS 3998346 3999794 . - 0 ID=cds-WP_227394150.1;Parent=gene-LI478_RS19380;Dbxref=Genbank:WP_227394150.1;Name=WP_227394150.1;Ontology_term=GO:0006400,GO:0009228,GO:0003824;gbkey=CDS;gene=thiI;go_function=catalytic activity|0003824||IEA;go_process=tRNA modification|0006400||IEA,thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014168857.1;locus_tag=LI478_RS19380;product=tRNA 4-thiouridine(8) synthase ThiI;protein_id=WP_227394150.1;transl_table=11 NZ_CP085478.1 RefSeq gene 3999976 4000218 . + . ID=gene-LI478_RS19385;Name=xseB;gbkey=Gene;gene=xseB;gene_biotype=protein_coding;locus_tag=LI478_RS19385 NZ_CP085478.1 Protein Homology CDS 3999976 4000218 . + 0 ID=cds-WP_002891398.1;Parent=gene-LI478_RS19385;Dbxref=Genbank:WP_002891398.1;Name=WP_002891398.1;gbkey=CDS;gene=xseB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225414.1;locus_tag=LI478_RS19385;product=exodeoxyribonuclease VII small subunit;protein_id=WP_002891398.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4000219 4001118 . + . ID=gene-LI478_RS19390;Name=ispA;gbkey=Gene;gene=ispA;gene_biotype=protein_coding;locus_tag=LI478_RS19390 NZ_CP085478.1 Protein Homology CDS 4000219 4001118 . + 0 ID=cds-WP_004177264.1;Parent=gene-LI478_RS19390;Dbxref=Genbank:WP_004177264.1;Name=WP_004177264.1;Ontology_term=GO:0008299;gbkey=CDS;gene=ispA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225413.1;locus_tag=LI478_RS19390;product=(2E%2C6E)-farnesyl diphosphate synthase;protein_id=WP_004177264.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4001137 4002999 . + . ID=gene-LI478_RS19395;Name=dxs;gbkey=Gene;gene=dxs;gene_biotype=protein_coding;locus_tag=LI478_RS19395 NZ_CP085478.1 Protein Homology CDS 4001137 4002999 . + 0 ID=cds-WP_004144655.1;Parent=gene-LI478_RS19395;Dbxref=Genbank:WP_004144655.1;Name=WP_004144655.1;Ontology_term=GO:0008615,GO:0009228,GO:0009240,GO:0008661,GO:0005737;gbkey=CDS;gene=dxs;go_component=cytoplasm|0005737||IEA;go_function=1-deoxy-D-xylulose-5-phosphate synthase activity|0008661||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA,thiamine biosynthetic process|0009228||IEA,isopentenyl diphosphate biosynthetic process|0009240||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225412.1;locus_tag=LI478_RS19395;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=WP_004144655.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4003060 4004034 . + . ID=gene-LI478_RS19400;Name=LI478_RS19400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19400 NZ_CP085478.1 Protein Homology CDS 4003060 4004034 . + 0 ID=cds-WP_004147313.1;Parent=gene-LI478_RS19400;Dbxref=Genbank:WP_004147313.1;Name=WP_004147313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225411.1;locus_tag=LI478_RS19400;product=aldo/keto reductase;protein_id=WP_004147313.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4004080 4004547 . - . ID=gene-LI478_RS19405;Name=pgpA;gbkey=Gene;gene=pgpA;gene_biotype=protein_coding;locus_tag=LI478_RS19405 NZ_CP085478.1 Protein Homology CDS 4004080 4004547 . - 0 ID=cds-WP_004204830.1;Parent=gene-LI478_RS19405;Dbxref=Genbank:WP_004204830.1;Name=WP_004204830.1;Ontology_term=GO:0006629,GO:0008962;gbkey=CDS;gene=pgpA;go_function=phosphatidylglycerophosphatase activity|0008962||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459415.1;locus_tag=LI478_RS19405;product=phosphatidylglycerophosphatase A;protein_id=WP_004204830.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4004576 4005547 . - . ID=gene-LI478_RS19410;Name=thiL;gbkey=Gene;gene=thiL;gene_biotype=protein_coding;locus_tag=LI478_RS19410 NZ_CP085478.1 Protein Homology CDS 4004576 4005547 . - 0 ID=cds-WP_064153237.1;Parent=gene-LI478_RS19410;Dbxref=Genbank:WP_064153237.1;Name=WP_064153237.1;Ontology_term=GO:0009228,GO:0009030;gbkey=CDS;gene=thiL;go_function=thiamine-phosphate kinase activity|0009030||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225409.1;locus_tag=LI478_RS19410;product=thiamine-phosphate kinase;protein_id=WP_064153237.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4005619 4006038 . - . ID=gene-LI478_RS19415;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=LI478_RS19415 NZ_CP085478.1 Protein Homology CDS 4005619 4006038 . - 0 ID=cds-WP_002891356.1;Parent=gene-LI478_RS19415;Dbxref=Genbank:WP_002891356.1;Name=WP_002891356.1;Ontology_term=GO:0006355;gbkey=CDS;gene=nusB;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225408.1;locus_tag=LI478_RS19415;product=transcription antitermination factor NusB;protein_id=WP_002891356.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4006058 4006528 . - . ID=gene-LI478_RS19420;Name=ribE;gbkey=Gene;gene=ribE;gene_biotype=protein_coding;locus_tag=LI478_RS19420 NZ_CP085478.1 Protein Homology CDS 4006058 4006528 . - 0 ID=cds-WP_001021161.1;Parent=gene-LI478_RS19420;Dbxref=Genbank:WP_001021161.1;Name=WP_001021161.1;Ontology_term=GO:0000906,GO:0009349;gbkey=CDS;gene=ribE;go_component=riboflavin synthase complex|0009349||IEA;go_function=6%2C7-dimethyl-8-ribityllumazine synthase activity|0000906||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818760.1;locus_tag=LI478_RS19420;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=WP_001021161.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4006616 4007719 . - . ID=gene-LI478_RS19425;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=LI478_RS19425 NZ_CP085478.1 Protein Homology CDS 4006616 4007719 . - 0 ID=cds-WP_004144650.1;Parent=gene-LI478_RS19425;Dbxref=Genbank:WP_004144650.1;Name=WP_004144650.1;Ontology_term=GO:0008270,GO:0008703,GO:0008835,GO:0050661;gbkey=CDS;gene=ribD;go_function=zinc ion binding|0008270||IEA,5-amino-6-(5-phosphoribosylamino)uracil reductase activity|0008703||IEA,diaminohydroxyphosphoribosylaminopyrimidine deaminase activity|0008835||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225406.1;locus_tag=LI478_RS19425;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;protein_id=WP_004144650.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4007723 4008172 . - . ID=gene-LI478_RS19430;Name=nrdR;gbkey=Gene;gene=nrdR;gene_biotype=protein_coding;locus_tag=LI478_RS19430 NZ_CP085478.1 Protein Homology CDS 4007723 4008172 . - 0 ID=cds-WP_002890417.1;Parent=gene-LI478_RS19430;Dbxref=Genbank:WP_002890417.1;Name=WP_002890417.1;Ontology_term=GO:0006355,GO:0140110;gbkey=CDS;gene=nrdR;go_function=transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017458860.1;locus_tag=LI478_RS19430;product=transcriptional regulator NrdR;protein_id=WP_002890417.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4008320 4008859 . + . ID=gene-LI478_RS19435;Name=LI478_RS19435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19435 NZ_CP085478.1 Protein Homology CDS 4008320 4008859 . + 0 ID=cds-WP_002890414.1;Parent=gene-LI478_RS19435;Dbxref=Genbank:WP_002890414.1;Name=WP_002890414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225404.1;locus_tag=LI478_RS19435;product=DUF3251 domain-containing protein;protein_id=WP_002890414.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4009158 4010042 . + . ID=gene-LI478_RS19440;Name=LI478_RS19440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19440 NZ_CP085478.1 Protein Homology CDS 4009158 4010042 . + 0 ID=cds-WP_002890412.1;Parent=gene-LI478_RS19440;Dbxref=Genbank:WP_002890412.1;Name=WP_002890412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225403.1;locus_tag=LI478_RS19440;product=nucleoside-specific channel-forming protein Tsx;protein_id=WP_002890412.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4010097 4010792 . - . ID=gene-LI478_RS19445;Name=LI478_RS19445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19445 NZ_CP085478.1 Protein Homology CDS 4010097 4010792 . - 0 ID=cds-WP_004144646.1;Parent=gene-LI478_RS19445;Dbxref=Genbank:WP_004144646.1;Name=WP_004144646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225402.1;locus_tag=LI478_RS19445;product=YafY family protein;protein_id=WP_004144646.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4010816 4011181 . - . ID=gene-LI478_RS19450;Name=LI478_RS19450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19450 NZ_CP085478.1 Protein Homology CDS 4010816 4011181 . - 0 ID=cds-WP_002890404.1;Parent=gene-LI478_RS19450;Dbxref=Genbank:WP_002890404.1;Name=WP_002890404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225401.1;locus_tag=LI478_RS19450;product=VOC family protein;protein_id=WP_002890404.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4011318 4012289 . - . ID=gene-LI478_RS19455;Name=secF;gbkey=Gene;gene=secF;gene_biotype=protein_coding;locus_tag=LI478_RS19455 NZ_CP085478.1 Protein Homology CDS 4011318 4012289 . - 0 ID=cds-WP_002890403.1;Parent=gene-LI478_RS19455;Dbxref=Genbank:WP_002890403.1;Name=WP_002890403.1;Ontology_term=GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secF;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225400.1;locus_tag=LI478_RS19455;product=protein translocase subunit SecF;protein_id=WP_002890403.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4012300 4014147 . - . ID=gene-LI478_RS19460;Name=secD;gbkey=Gene;gene=secD;gene_biotype=protein_coding;locus_tag=LI478_RS19460 NZ_CP085478.1 Protein Homology CDS 4012300 4014147 . - 0 ID=cds-WP_002890400.1;Parent=gene-LI478_RS19460;Dbxref=Genbank:WP_002890400.1;Name=WP_002890400.1;Ontology_term=GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secD;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125127.1;locus_tag=LI478_RS19460;product=protein translocase subunit SecD;protein_id=WP_002890400.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4014174 4014506 . - . ID=gene-LI478_RS19465;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=LI478_RS19465 NZ_CP085478.1 Protein Homology CDS 4014174 4014506 . - 0 ID=cds-WP_002890398.1;Parent=gene-LI478_RS19465;Dbxref=Genbank:WP_002890398.1;Name=WP_002890398.1;Ontology_term=GO:0009306,GO:0015450,GO:0005886;gbkey=CDS;gene=yajC;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000007628.1;locus_tag=LI478_RS19465;product=preprotein translocase subunit YajC;protein_id=WP_002890398.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4014529 4015656 . - . ID=gene-LI478_RS19470;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=LI478_RS19470 NZ_CP085478.1 Protein Homology CDS 4014529 4015656 . - 0 ID=cds-WP_002890395.1;Parent=gene-LI478_RS19470;Dbxref=Genbank:WP_002890395.1;Name=WP_002890395.1;Ontology_term=GO:0006400,GO:0008479,GO:0005737;gbkey=CDS;gene=tgt;go_component=cytoplasm|0005737||IEA;go_function=queuine tRNA-ribosyltransferase activity|0008479||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904808.1;locus_tag=LI478_RS19470;product=tRNA guanosine(34) transglycosylase Tgt;protein_id=WP_002890395.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4015765 4016829 . - . ID=gene-LI478_RS19475;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=LI478_RS19475 NZ_CP085478.1 Protein Homology CDS 4015765 4016829 . - 0 ID=cds-WP_002890390.1;Parent=gene-LI478_RS19475;Dbxref=Genbank:WP_002890390.1;Name=WP_002890390.1;Ontology_term=GO:0006400,GO:0008616,GO:0051075,GO:0005737;gbkey=CDS;gene=queA;go_component=cytoplasm|0005737||IEA;go_function=S-adenosylmethionine:tRNA ribosyltransferase-isomerase activity|0051075||IEA;go_process=tRNA modification|0006400||IEA,queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225396.1;locus_tag=LI478_RS19475;product=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;protein_id=WP_002890390.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4016894 4017010 . - . ID=gene-LI478_RS19480;Name=LI478_RS19480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19480 NZ_CP085478.1 Protein Homology CDS 4016894 4017010 . - 0 ID=cds-WP_004218831.1;Parent=gene-LI478_RS19480;Dbxref=Genbank:WP_004218831.1;Name=WP_004218831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225395.1;locus_tag=LI478_RS19480;product=hypothetical protein;protein_id=WP_004218831.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4017085 4017666 . + . ID=gene-LI478_RS19485;Name=acpH;gbkey=Gene;gene=acpH;gene_biotype=protein_coding;locus_tag=LI478_RS19485 NZ_CP085478.1 Protein Homology CDS 4017085 4017666 . + 0 ID=cds-WP_004178734.1;Parent=gene-LI478_RS19485;Dbxref=Genbank:WP_004178734.1;Name=WP_004178734.1;Ontology_term=GO:0006633,GO:0008770;gbkey=CDS;gene=acpH;go_function=[acyl-carrier-protein] phosphodiesterase activity|0008770||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225394.1;locus_tag=LI478_RS19485;product=ACP phosphodiesterase;protein_id=WP_004178734.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4017794 4018396 . + . ID=gene-LI478_RS19490;Name=LI478_RS19490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19490 NZ_CP085478.1 Protein Homology CDS 4017794 4018396 . + 0 ID=cds-WP_002890386.1;Parent=gene-LI478_RS19490;Dbxref=Genbank:WP_002890386.1;Name=WP_002890386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225393.1;locus_tag=LI478_RS19490;product=peroxiredoxin;protein_id=WP_002890386.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4018520 4018687 . - . ID=gene-LI478_RS19495;Name=LI478_RS19495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19495 NZ_CP085478.1 Protein Homology CDS 4018520 4018687 . - 0 ID=cds-WP_032427897.1;Parent=gene-LI478_RS19495;Dbxref=Genbank:WP_032427897.1;Name=WP_032427897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225392.1;locus_tag=LI478_RS19495;product=hypothetical protein;protein_id=WP_032427897.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4018743 4019186 . + . ID=gene-LI478_RS19500;Name=LI478_RS19500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19500 NZ_CP085478.1 Protein Homology CDS 4018743 4019186 . + 0 ID=cds-WP_002890380.1;Parent=gene-LI478_RS19500;Dbxref=Genbank:WP_002890380.1;Name=WP_002890380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225391.1;locus_tag=LI478_RS19500;product=PTS sugar transporter subunit IIA;protein_id=WP_002890380.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4019192 4019479 . + . ID=gene-LI478_RS19505;Name=LI478_RS19505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19505 NZ_CP085478.1 Protein Homology CDS 4019192 4019479 . + 0 ID=cds-WP_002890376.1;Parent=gene-LI478_RS19505;Dbxref=Genbank:WP_002890376.1;Name=WP_002890376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225390.1;locus_tag=LI478_RS19505;product=PTS sugar transporter subunit IIB;protein_id=WP_002890376.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4019500 4020891 . + . ID=gene-LI478_RS19510;Name=LI478_RS19510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19510 NZ_CP085478.1 Protein Homology CDS 4019500 4020891 . + 0 ID=cds-WP_004151345.1;Parent=gene-LI478_RS19510;Dbxref=Genbank:WP_004151345.1;Name=WP_004151345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225389.1;locus_tag=LI478_RS19510;product=PTS ascorbate transporter subunit IIC;protein_id=WP_004151345.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4020957 4021919 . + . ID=gene-LI478_RS19515;Name=LI478_RS19515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19515 NZ_CP085478.1 Protein Homology CDS 4020957 4021919 . + 0 ID=cds-WP_002890372.1;Parent=gene-LI478_RS19515;Dbxref=Genbank:WP_002890372.1;Name=WP_002890372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225388.1;locus_tag=LI478_RS19515;product=PfkB family carbohydrate kinase;protein_id=WP_002890372.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4021955 4022809 . + . ID=gene-LI478_RS19520;Name=fba;gbkey=Gene;gene=fba;gene_biotype=protein_coding;locus_tag=LI478_RS19520 NZ_CP085478.1 Protein Homology CDS 4021955 4022809 . + 0 ID=cds-WP_020316516.1;Parent=gene-LI478_RS19520;Dbxref=Genbank:WP_020316516.1;Name=WP_020316516.1;Ontology_term=GO:0006096,GO:0004332;gbkey=CDS;gene=fba;go_function=fructose-bisphosphate aldolase activity|0004332||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225387.1;locus_tag=LI478_RS19520;product=class II fructose-1%2C6-bisphosphate aldolase;protein_id=WP_020316516.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4022868 4024736 . - . ID=gene-LI478_RS19525;Name=LI478_RS19525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19525 NZ_CP085478.1 Protein Homology CDS 4022868 4024736 . - 0 ID=cds-WP_032421064.1;Parent=gene-LI478_RS19525;Dbxref=Genbank:WP_032421064.1;Name=WP_032421064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225386.1;locus_tag=LI478_RS19525;product=amidohydrolase;protein_id=WP_032421064.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4024761 4025306 . - . ID=gene-LI478_RS19530;Name=LI478_RS19530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19530 NZ_CP085478.1 Protein Homology CDS 4024761 4025306 . - 0 ID=cds-WP_002890365.1;Parent=gene-LI478_RS19530;Dbxref=Genbank:WP_002890365.1;Name=WP_002890365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225385.1;locus_tag=LI478_RS19530;product=antibiotic biosynthesis monooxygenase;protein_id=WP_002890365.1;transl_table=11 NZ_CP085478.1 RefSeq pseudogene 4025493 4026132 . - . ID=gene-LI478_RS19535;Name=LI478_RS19535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS19535;pseudo=true NZ_CP085478.1 Protein Homology CDS 4025493 4026132 . - 0 ID=cds-LI478_RS19535;Parent=gene-LI478_RS19535;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225384.1;locus_tag=LI478_RS19535;product=hydrolase;pseudo=true;transl_table=11 NZ_CP085478.1 RefSeq gene 4026399 4027301 . + . ID=gene-LI478_RS19540;Name=LI478_RS19540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19540 NZ_CP085478.1 Protein Homology CDS 4026399 4027301 . + 0 ID=cds-WP_002890353.1;Parent=gene-LI478_RS19540;Dbxref=Genbank:WP_002890353.1;Name=WP_002890353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225383.1;locus_tag=LI478_RS19540;product=LysR substrate-binding domain-containing protein;protein_id=WP_002890353.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4027298 4029115 . - . ID=gene-LI478_RS19545;Name=malZ;gbkey=Gene;gene=malZ;gene_biotype=protein_coding;locus_tag=LI478_RS19545 NZ_CP085478.1 Protein Homology CDS 4027298 4029115 . - 0 ID=cds-WP_004147293.1;Parent=gene-LI478_RS19545;Dbxref=Genbank:WP_004147293.1;Name=WP_004147293.1;Ontology_term=GO:0005975,GO:0004558;gbkey=CDS;gene=malZ;go_function=alpha-1%2C4-glucosidase activity|0004558||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225382.1;locus_tag=LI478_RS19545;product=maltodextrin glucosidase;protein_id=WP_004147293.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4029267 4030640 . - . ID=gene-LI478_RS19550;Name=proY;gbkey=Gene;gene=proY;gene_biotype=protein_coding;locus_tag=LI478_RS19550 NZ_CP085478.1 Protein Homology CDS 4029267 4030640 . - 0 ID=cds-WP_009485323.1;Parent=gene-LI478_RS19550;Dbxref=Genbank:WP_009485323.1;Name=WP_009485323.1;Ontology_term=GO:0006865,GO:0055085,GO:0016020;gbkey=CDS;gene=proY;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225381.1;locus_tag=LI478_RS19550;product=proline-specific permease ProY;protein_id=WP_009485323.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4030727 4032046 . - . ID=gene-LI478_RS19555;Name=brnQ;gbkey=Gene;gene=brnQ;gene_biotype=protein_coding;locus_tag=LI478_RS19555 NZ_CP085478.1 Protein Homology CDS 4030727 4032046 . - 0 ID=cds-WP_004144627.1;Parent=gene-LI478_RS19555;Dbxref=Genbank:WP_004144627.1;Name=WP_004144627.1;gbkey=CDS;gene=brnQ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225380.1;locus_tag=LI478_RS19555;product=branched-chain amino acid transporter carrier protein BrnQ;protein_id=WP_004144627.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4032460 4033755 . - . ID=gene-LI478_RS19560;Name=phoR;gbkey=Gene;gene=phoR;gene_biotype=protein_coding;locus_tag=LI478_RS19560 NZ_CP085478.1 Protein Homology CDS 4032460 4033755 . - 0 ID=cds-WP_002890344.1;Parent=gene-LI478_RS19560;Dbxref=Genbank:WP_002890344.1;Name=WP_002890344.1;Ontology_term=GO:0000160,GO:0006355,GO:0016310,GO:0000155,GO:0004721,GO:0016020;gbkey=CDS;gene=phoR;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,phosphoprotein phosphatase activity|0004721||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225379.1;locus_tag=LI478_RS19560;product=phosphate regulon sensor histidine kinase PhoR;protein_id=WP_002890344.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4033777 4034466 . - . ID=gene-LI478_RS19565;Name=phoB;gbkey=Gene;gene=phoB;gene_biotype=protein_coding;locus_tag=LI478_RS19565 NZ_CP085478.1 Protein Homology CDS 4033777 4034466 . - 0 ID=cds-WP_002890343.1;Parent=gene-LI478_RS19565;Dbxref=Genbank:WP_002890343.1;Name=WP_002890343.1;gbkey=CDS;gene=phoB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000113934.1;locus_tag=LI478_RS19565;product=phosphate response regulator transcription factor PhoB;protein_id=WP_002890343.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4034649 4035854 . + . ID=gene-LI478_RS19570;Name=sbcD;gbkey=Gene;gene=sbcD;gene_biotype=protein_coding;locus_tag=LI478_RS19570 NZ_CP085478.1 Protein Homology CDS 4034649 4035854 . + 0 ID=cds-WP_009485322.1;Parent=gene-LI478_RS19570;Dbxref=Genbank:WP_009485322.1;Name=WP_009485322.1;Ontology_term=GO:0006259,GO:0008408;gbkey=CDS;gene=sbcD;go_function=3'-5' exonuclease activity|0008408||IEA;go_process=DNA metabolic process|0006259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008805355.1;locus_tag=LI478_RS19570;product=exonuclease subunit SbcD;protein_id=WP_009485322.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4035851 4038988 . + . ID=gene-LI478_RS19575;Name=sbcC;gbkey=Gene;gene=sbcC;gene_biotype=protein_coding;locus_tag=LI478_RS19575 NZ_CP085478.1 Protein Homology CDS 4035851 4038988 . + 0 ID=cds-WP_032414585.1;Parent=gene-LI478_RS19575;Dbxref=Genbank:WP_032414585.1;Name=WP_032414585.1;gbkey=CDS;gene=sbcC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225376.1;locus_tag=LI478_RS19575;product=exonuclease subunit SbcC;protein_id=WP_032414585.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4039062 4039976 . - . ID=gene-LI478_RS19580;Name=mak;gbkey=Gene;gene=mak;gene_biotype=protein_coding;locus_tag=LI478_RS19580 NZ_CP085478.1 Protein Homology CDS 4039062 4039976 . - 0 ID=cds-WP_021312321.1;Parent=gene-LI478_RS19580;Dbxref=Genbank:WP_021312321.1;Name=WP_021312321.1;gbkey=CDS;gene=mak;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225375.1;locus_tag=LI478_RS19580;product=fructokinase;protein_id=WP_021312321.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4040068 4040979 . + . ID=gene-LI478_RS19585;Name=rdgC;gbkey=Gene;gene=rdgC;gene_biotype=protein_coding;locus_tag=LI478_RS19585 NZ_CP085478.1 Protein Homology CDS 4040068 4040979 . + 0 ID=cds-WP_002890285.1;Parent=gene-LI478_RS19585;Dbxref=Genbank:WP_002890285.1;Name=WP_002890285.1;Ontology_term=GO:0006310;gbkey=CDS;gene=rdgC;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120935.1;locus_tag=LI478_RS19585;product=recombination-associated protein RdgC;protein_id=WP_002890285.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4041051 4041335 . - . ID=gene-LI478_RS19590;Name=ppnP;gbkey=Gene;gene=ppnP;gene_biotype=protein_coding;locus_tag=LI478_RS19590 NZ_CP085478.1 Protein Homology CDS 4041051 4041335 . - 0 ID=cds-WP_002890284.1;Parent=gene-LI478_RS19590;Dbxref=Genbank:WP_002890284.1;Name=WP_002890284.1;gbkey=CDS;gene=ppnP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225373.1;locus_tag=LI478_RS19590;product=pyrimidine/purine nucleoside phosphorylase;protein_id=WP_002890284.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4041413 4042093 . - . ID=gene-LI478_RS19595;Name=LI478_RS19595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19595 NZ_CP085478.1 Protein Homology CDS 4041413 4042093 . - 0 ID=cds-WP_004144619.1;Parent=gene-LI478_RS19595;Dbxref=Genbank:WP_004144619.1;Name=WP_004144619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225372.1;locus_tag=LI478_RS19595;product=AroM family protein;protein_id=WP_004144619.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4042344 4042535 . - . ID=gene-LI478_RS19600;Name=LI478_RS19600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19600 NZ_CP085478.1 Protein Homology CDS 4042344 4042535 . - 0 ID=cds-WP_002890278.1;Parent=gene-LI478_RS19600;Dbxref=Genbank:WP_002890278.1;Name=WP_002890278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459384.1;locus_tag=LI478_RS19600;product=YaiA family protein;protein_id=WP_002890278.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4042607 4043140 . - . ID=gene-LI478_RS19605;Name=aroL;gbkey=Gene;gene=aroL;gene_biotype=protein_coding;locus_tag=LI478_RS19605 NZ_CP085478.1 Protein Homology CDS 4042607 4043140 . - 0 ID=cds-WP_002890276.1;Parent=gene-LI478_RS19605;Dbxref=Genbank:WP_002890276.1;Name=WP_002890276.1;Ontology_term=GO:0009073,GO:0004765;gbkey=CDS;gene=aroL;go_function=shikimate kinase activity|0004765||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225370.1;locus_tag=LI478_RS19605;product=shikimate kinase AroL;protein_id=WP_002890276.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4043469 4044179 . + . ID=gene-LI478_RS19610;Name=LI478_RS19610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19610 NZ_CP085478.1 Protein Homology CDS 4043469 4044179 . + 0 ID=cds-WP_002890273.1;Parent=gene-LI478_RS19610;Dbxref=Genbank:WP_002890273.1;Name=WP_002890273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225369.1;locus_tag=LI478_RS19610;product=DUF2076 domain-containing protein;protein_id=WP_002890273.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4044176 4044634 . - . ID=gene-LI478_RS19615;Name=LI478_RS19615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19615 NZ_CP085478.1 Protein Homology CDS 4044176 4044634 . - 0 ID=cds-WP_002890230.1;Parent=gene-LI478_RS19615;Dbxref=Genbank:WP_002890230.1;Name=WP_002890230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225368.1;locus_tag=LI478_RS19615;product=YaiI/YqxD family protein;protein_id=WP_002890230.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4044751 4045560 . + . ID=gene-LI478_RS19620;Name=proC;gbkey=Gene;gene=proC;gene_biotype=protein_coding;locus_tag=LI478_RS19620 NZ_CP085478.1 Protein Homology CDS 4044751 4045560 . + 0 ID=cds-WP_004177276.1;Parent=gene-LI478_RS19620;Dbxref=Genbank:WP_004177276.1;Name=WP_004177276.1;Ontology_term=GO:0006561,GO:0004735;gbkey=CDS;gene=proC;go_function=pyrroline-5-carboxylate reductase activity|0004735||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225367.1;locus_tag=LI478_RS19620;product=pyrroline-5-carboxylate reductase;protein_id=WP_004177276.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4045628 4045945 . - . ID=gene-LI478_RS19625;Name=LI478_RS19625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19625 NZ_CP085478.1 Protein Homology CDS 4045628 4045945 . - 0 ID=cds-WP_002890225.1;Parent=gene-LI478_RS19625;Dbxref=Genbank:WP_002890225.1;Name=WP_002890225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225366.1;locus_tag=LI478_RS19625;product=PsiF family protein;protein_id=WP_002890225.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4046037 4047467 . - . ID=gene-LI478_RS19630;Name=phoA;gbkey=Gene;gene=phoA;gene_biotype=protein_coding;locus_tag=LI478_RS19630 NZ_CP085478.1 Protein Homology CDS 4046037 4047467 . - 0 ID=cds-WP_004232385.1;Parent=gene-LI478_RS19630;Dbxref=Genbank:WP_004232385.1;Name=WP_004232385.1;Ontology_term=GO:0016791;gbkey=CDS;gene=phoA;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225365.1;locus_tag=LI478_RS19630;product=alkaline phosphatase;protein_id=WP_004232385.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4047557 4047817 . - . ID=gene-LI478_RS19635;Name=iraP;gbkey=Gene;gene=iraP;gene_biotype=protein_coding;locus_tag=LI478_RS19635 NZ_CP085478.1 Protein Homology CDS 4047557 4047817 . - 0 ID=cds-WP_002890221.1;Parent=gene-LI478_RS19635;Dbxref=Genbank:WP_002890221.1;Name=WP_002890221.1;gbkey=CDS;gene=iraP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225364.1;locus_tag=LI478_RS19635;product=anti-adapter protein IraP;protein_id=WP_002890221.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4048116 4049315 . - . ID=gene-LI478_RS19640;Name=LI478_RS19640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19640 NZ_CP085478.1 Protein Homology CDS 4048116 4049315 . - 0 ID=cds-WP_002890219.1;Parent=gene-LI478_RS19640;Dbxref=Genbank:WP_002890219.1;Name=WP_002890219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225363.1;locus_tag=LI478_RS19640;product=multidrug efflux MFS transporter;protein_id=WP_002890219.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4049485 4050168 . - . ID=gene-LI478_RS19645;Name=LI478_RS19645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19645 NZ_CP085478.1 Protein Homology CDS 4049485 4050168 . - 0 ID=cds-WP_021312323.1;Parent=gene-LI478_RS19645;Dbxref=Genbank:WP_021312323.1;Name=WP_021312323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225362.1;locus_tag=LI478_RS19645;product=extensin family protein;protein_id=WP_021312323.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4050268 4051365 . + . ID=gene-LI478_RS19650;Name=ddlA;gbkey=Gene;gene=ddlA;gene_biotype=protein_coding;locus_tag=LI478_RS19650 NZ_CP085478.1 Protein Homology CDS 4050268 4051365 . + 0 ID=cds-WP_004151348.1;Parent=gene-LI478_RS19650;Dbxref=Genbank:WP_004151348.1;Name=WP_004151348.1;Ontology_term=GO:0008716;gbkey=CDS;gene=ddlA;go_function=D-alanine-D-alanine ligase activity|0008716||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004099379.1;locus_tag=LI478_RS19650;product=D-alanine--D-alanine ligase;protein_id=WP_004151348.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4051398 4051601 . - . ID=gene-LI478_RS19655;Name=LI478_RS19655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19655 NZ_CP085478.1 Protein Homology CDS 4051398 4051601 . - 0 ID=cds-WP_064153233.1;Parent=gene-LI478_RS19655;Dbxref=Genbank:WP_064153233.1;Name=WP_064153233.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225360.1;locus_tag=LI478_RS19655;product=DUF2754 family protein;protein_id=WP_064153233.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4051854 4052156 . + . ID=gene-LI478_RS19660;Name=LI478_RS19660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19660 NZ_CP085478.1 Protein Homology CDS 4051854 4052156 . + 0 ID=cds-WP_002890210.1;Parent=gene-LI478_RS19660;Dbxref=Genbank:WP_002890210.1;Name=WP_002890210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225359.1;locus_tag=LI478_RS19660;product=YaiY family protein;protein_id=WP_002890210.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4052153 4053259 . - . ID=gene-LI478_RS19665;Name=LI478_RS19665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19665 NZ_CP085478.1 Protein Homology CDS 4052153 4053259 . - 0 ID=cds-WP_004183146.1;Parent=gene-LI478_RS19665;Dbxref=Genbank:WP_004183146.1;Name=WP_004183146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225358.1;locus_tag=LI478_RS19665;product=DUF1615 domain-containing protein;protein_id=WP_004183146.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4053278 4054498 . - . ID=gene-LI478_RS19670;Name=sbmA;gbkey=Gene;gene=sbmA;gene_biotype=protein_coding;locus_tag=LI478_RS19670 NZ_CP085478.1 Protein Homology CDS 4053278 4054498 . - 0 ID=cds-WP_002890204.1;Parent=gene-LI478_RS19670;Dbxref=Genbank:WP_002890204.1;Name=WP_002890204.1;Ontology_term=GO:0015833,GO:1904680;gbkey=CDS;gene=sbmA;go_function=peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225357.1;locus_tag=LI478_RS19670;product=peptide antibiotic transporter SbmA;protein_id=WP_002890204.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4054616 4055128 . - . ID=gene-LI478_RS19675;Name=LI478_RS19675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19675 NZ_CP085478.1 Protein Homology CDS 4054616 4055128 . - 0 ID=cds-WP_072143249.1;Parent=gene-LI478_RS19675;Dbxref=Genbank:WP_072143249.1;Name=WP_072143249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225356.1;locus_tag=LI478_RS19675;product=isochorismatase family protein;protein_id=WP_072143249.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4055348 4056508 . + . ID=gene-LI478_RS19680;Name=ampH;gbkey=Gene;gene=ampH;gene_biotype=protein_coding;locus_tag=LI478_RS19680 NZ_CP085478.1 Protein Homology CDS 4055348 4056508 . + 0 ID=cds-WP_004178722.1;Parent=gene-LI478_RS19680;Dbxref=Genbank:WP_004178722.1;Name=WP_004178722.1;gbkey=CDS;gene=ampH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225355.1;locus_tag=LI478_RS19680;product=D-alanyl-D-alanine-carboxypeptidase/endopeptidase AmpH;protein_id=WP_004178722.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4056615 4057589 . + . ID=gene-LI478_RS19685;Name=hemB;gbkey=Gene;gene=hemB;gene_biotype=protein_coding;locus_tag=LI478_RS19685 NZ_CP085478.1 Protein Homology CDS 4056615 4057589 . + 0 ID=cds-WP_002890201.1;Parent=gene-LI478_RS19685;Dbxref=Genbank:WP_002890201.1;Name=WP_002890201.1;Ontology_term=GO:0033014,GO:0004655;gbkey=CDS;gene=hemB;go_function=porphobilinogen synthase activity|0004655||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225354.1;locus_tag=LI478_RS19685;product=porphobilinogen synthase;protein_id=WP_002890201.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4057845 4058336 . + . ID=gene-LI478_RS19690;Name=LI478_RS19690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19690 NZ_CP085478.1 Protein Homology CDS 4057845 4058336 . + 0 ID=cds-WP_004178721.1;Parent=gene-LI478_RS19690;Dbxref=Genbank:WP_004178721.1;Name=WP_004178721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004204888.1;locus_tag=LI478_RS19690;product=transposase;protein_id=WP_004178721.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4058517 4060235 . + . ID=gene-LI478_RS19695;Name=LI478_RS19695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19695 NZ_CP085478.1 Protein Homology CDS 4058517 4060235 . + 0 ID=cds-WP_040242094.1;Parent=gene-LI478_RS19695;Dbxref=Genbank:WP_040242094.1;Name=WP_040242094.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225353.1;locus_tag=LI478_RS19695;product=GNAT family N-acetyltransferase;protein_id=WP_040242094.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4060398 4061249 . - . ID=gene-LI478_RS19700;Name=tauD;gbkey=Gene;gene=tauD;gene_biotype=protein_coding;locus_tag=LI478_RS19700 NZ_CP085478.1 Protein Homology CDS 4060398 4061249 . - 0 ID=cds-WP_004147277.1;Parent=gene-LI478_RS19700;Dbxref=Genbank:WP_004147277.1;Name=WP_004147277.1;Ontology_term=GO:0016491;gbkey=CDS;gene=tauD;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225352.1;locus_tag=LI478_RS19700;product=taurine dioxygenase;protein_id=WP_004147277.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4061246 4062073 . - . ID=gene-LI478_RS19705;Name=tauC;gbkey=Gene;gene=tauC;gene_biotype=protein_coding;locus_tag=LI478_RS19705 NZ_CP085478.1 Protein Homology CDS 4061246 4062073 . - 0 ID=cds-WP_004144603.1;Parent=gene-LI478_RS19705;Dbxref=Genbank:WP_004144603.1;Name=WP_004144603.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=tauC;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225351.1;locus_tag=LI478_RS19705;product=taurine ABC transporter permease TauC;protein_id=WP_004144603.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4062070 4062837 . - . ID=gene-LI478_RS19710;Name=tauB;gbkey=Gene;gene=tauB;gene_biotype=protein_coding;locus_tag=LI478_RS19710 NZ_CP085478.1 Protein Homology CDS 4062070 4062837 . - 0 ID=cds-WP_004178719.1;Parent=gene-LI478_RS19710;Dbxref=Genbank:WP_004178719.1;Name=WP_004178719.1;Ontology_term=GO:0005524,GO:0016020;gbkey=CDS;gene=tauB;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225350.1;locus_tag=LI478_RS19710;product=taurine ABC transporter ATP-binding subunit;protein_id=WP_004178719.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4062849 4063811 . - . ID=gene-LI478_RS19715;Name=tauA;gbkey=Gene;gene=tauA;gene_biotype=protein_coding;locus_tag=LI478_RS19715 NZ_CP085478.1 Protein Homology CDS 4062849 4063811 . - 0 ID=cds-WP_002890192.1;Parent=gene-LI478_RS19715;Dbxref=Genbank:WP_002890192.1;Name=WP_002890192.1;Ontology_term=GO:0055085,GO:0022857,GO:0042597,GO:0043190;gbkey=CDS;gene=tauA;go_component=periplasmic space|0042597||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225349.1;locus_tag=LI478_RS19715;product=taurine ABC transporter substrate-binding protein;protein_id=WP_002890192.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4064051 4064983 . - . ID=gene-LI478_RS19720;Name=mmuM;gbkey=Gene;gene=mmuM;gene_biotype=protein_coding;locus_tag=LI478_RS19720 NZ_CP085478.1 Protein Homology CDS 4064051 4064983 . - 0 ID=cds-WP_004144601.1;Parent=gene-LI478_RS19720;Dbxref=Genbank:WP_004144601.1;Name=WP_004144601.1;Ontology_term=GO:0009086,GO:0047150;gbkey=CDS;gene=mmuM;go_function=betaine-homocysteine S-methyltransferase activity|0047150||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225348.1;locus_tag=LI478_RS19720;product=homocysteine S-methyltransferase;protein_id=WP_004144601.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4064970 4066379 . - . ID=gene-LI478_RS19725;Name=mmuP;gbkey=Gene;gene=mmuP;gene_biotype=protein_coding;locus_tag=LI478_RS19725 NZ_CP085478.1 Protein Homology CDS 4064970 4066379 . - 0 ID=cds-WP_002890161.1;Parent=gene-LI478_RS19725;Dbxref=Genbank:WP_002890161.1;Name=WP_002890161.1;Ontology_term=GO:0055085;gbkey=CDS;gene=mmuP;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225347.1;locus_tag=LI478_RS19725;product=S-methylmethionine permease;protein_id=WP_002890161.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4066462 4066590 . - . ID=gene-LI478_RS19730;Name=LI478_RS19730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19730 NZ_CP085478.1 Protein Homology CDS 4066462 4066590 . - 0 ID=cds-WP_072143245.1;Parent=gene-LI478_RS19730;Dbxref=Genbank:WP_072143245.1;Name=WP_072143245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225346.1;locus_tag=LI478_RS19730;product=hypothetical protein;protein_id=WP_072143245.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4066653 4068032 . + . ID=gene-LI478_RS19735;Name=eat;gbkey=Gene;gene=eat;gene_biotype=protein_coding;locus_tag=LI478_RS19735 NZ_CP085478.1 Protein Homology CDS 4066653 4068032 . + 0 ID=cds-WP_032438726.1;Parent=gene-LI478_RS19735;Dbxref=Genbank:WP_032438726.1;Name=WP_032438726.1;Ontology_term=GO:0006865,GO:0015171,GO:0016020;gbkey=CDS;gene=eat;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225345.1;locus_tag=LI478_RS19735;product=ethanolamine permease;protein_id=WP_032438726.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4068042 4069430 . + . ID=gene-LI478_RS19740;Name=LI478_RS19740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19740 NZ_CP085478.1 Protein Homology CDS 4068042 4069430 . + 0 ID=cds-WP_004147269.1;Parent=gene-LI478_RS19740;Dbxref=Genbank:WP_004147269.1;Name=WP_004147269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225344.1;locus_tag=LI478_RS19740;product=ethanolamine ammonia-lyase subunit EutB;protein_id=WP_004147269.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4069427 4070203 . + . ID=gene-LI478_RS19745;Name=eutC;gbkey=Gene;gene=eutC;gene_biotype=protein_coding;locus_tag=LI478_RS19745 NZ_CP085478.1 Protein Homology CDS 4069427 4070203 . + 0 ID=cds-WP_063416994.1;Parent=gene-LI478_RS19745;Dbxref=Genbank:WP_063416994.1;Name=WP_063416994.1;Ontology_term=GO:0006520,GO:0008851;gbkey=CDS;gene=eutC;go_function=ethanolamine ammonia-lyase activity|0008851||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225343.1;locus_tag=LI478_RS19745;product=ethanolamine ammonia-lyase subunit EutC;protein_id=WP_063416994.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4070309 4070512 . - . ID=gene-LI478_RS19750;Name=LI478_RS19750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19750 NZ_CP085478.1 GeneMarkS-2+ CDS 4070309 4070512 . - 0 ID=cds-WP_142375272.1;Parent=gene-LI478_RS19750;Dbxref=Genbank:WP_142375272.1;Name=WP_142375272.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LI478_RS19750;product=hypothetical protein;protein_id=WP_142375272.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4070642 4070785 . - . ID=gene-LI478_RS19755;Name=LI478_RS19755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19755 NZ_CP085478.1 Protein Homology CDS 4070642 4070785 . - 0 ID=cds-WP_020804790.1;Parent=gene-LI478_RS19755;Dbxref=Genbank:WP_020804790.1;Name=WP_020804790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225342.1;locus_tag=LI478_RS19755;product=hypothetical protein;protein_id=WP_020804790.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4070778 4071884 . + . ID=gene-LI478_RS19760;Name=LI478_RS19760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19760 NZ_CP085478.1 Protein Homology CDS 4070778 4071884 . + 0 ID=cds-WP_004147267.1;Parent=gene-LI478_RS19760;Dbxref=Genbank:WP_004147267.1;Name=WP_004147267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225341.1;locus_tag=LI478_RS19760;product=ABC transporter substrate-binding protein;protein_id=WP_004147267.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4071904 4072803 . + . ID=gene-LI478_RS19765;Name=LI478_RS19765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19765 NZ_CP085478.1 Protein Homology CDS 4071904 4072803 . + 0 ID=cds-WP_002890128.1;Parent=gene-LI478_RS19765;Dbxref=Genbank:WP_002890128.1;Name=WP_002890128.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225340.1;locus_tag=LI478_RS19765;product=branched-chain amino acid ABC transporter permease;protein_id=WP_002890128.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4072803 4073852 . + . ID=gene-LI478_RS19770;Name=LI478_RS19770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19770 NZ_CP085478.1 Protein Homology CDS 4072803 4073852 . + 0 ID=cds-WP_004144594.1;Parent=gene-LI478_RS19770;Dbxref=Genbank:WP_004144594.1;Name=WP_004144594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225339.1;locus_tag=LI478_RS19770;product=branched-chain amino acid ABC transporter permease;protein_id=WP_004144594.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4073839 4074621 . + . ID=gene-LI478_RS19775;Name=LI478_RS19775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19775 NZ_CP085478.1 Protein Homology CDS 4073839 4074621 . + 0 ID=cds-WP_004151354.1;Parent=gene-LI478_RS19775;Dbxref=Genbank:WP_004151354.1;Name=WP_004151354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225338.1;locus_tag=LI478_RS19775;product=ABC transporter ATP-binding protein;protein_id=WP_004151354.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4074614 4075309 . + . ID=gene-LI478_RS19780;Name=LI478_RS19780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19780 NZ_CP085478.1 Protein Homology CDS 4074614 4075309 . + 0 ID=cds-WP_002890126.1;Parent=gene-LI478_RS19780;Dbxref=Genbank:WP_002890126.1;Name=WP_002890126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225337.1;locus_tag=LI478_RS19780;product=ABC transporter ATP-binding protein;protein_id=WP_002890126.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4075426 4075596 . - . ID=gene-LI478_RS19785;Name=LI478_RS19785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19785 NZ_CP085478.1 Protein Homology CDS 4075426 4075596 . - 0 ID=cds-WP_002890108.1;Parent=gene-LI478_RS19785;Dbxref=Genbank:WP_002890108.1;Name=WP_002890108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002890108.1;locus_tag=LI478_RS19785;product=hypothetical protein;protein_id=WP_002890108.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4075930 4076739 . + . ID=gene-LI478_RS19790;Name=LI478_RS19790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19790 NZ_CP085478.1 Protein Homology CDS 4075930 4076739 . + 0 ID=cds-WP_002890106.1;Parent=gene-LI478_RS19790;Dbxref=Genbank:WP_002890106.1;Name=WP_002890106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225335.1;locus_tag=LI478_RS19790;product=ABC transporter substrate-binding protein;protein_id=WP_002890106.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4076741 4077559 . + . ID=gene-LI478_RS19795;Name=LI478_RS19795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19795 NZ_CP085478.1 Protein Homology CDS 4076741 4077559 . + 0 ID=cds-WP_004151355.1;Parent=gene-LI478_RS19795;Dbxref=Genbank:WP_004151355.1;Name=WP_004151355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225334.1;locus_tag=LI478_RS19795;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_004151355.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4077556 4078308 . + . ID=gene-LI478_RS19800;Name=LI478_RS19800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19800 NZ_CP085478.1 Protein Homology CDS 4077556 4078308 . + 0 ID=cds-WP_009307885.1;Parent=gene-LI478_RS19800;Dbxref=Genbank:WP_009307885.1;Name=WP_009307885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225333.1;locus_tag=LI478_RS19800;product=amino acid ABC transporter permease;protein_id=WP_009307885.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4078298 4078987 . + . ID=gene-LI478_RS19805;Name=LI478_RS19805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19805 NZ_CP085478.1 Protein Homology CDS 4078298 4078987 . + 0 ID=cds-WP_004178714.1;Parent=gene-LI478_RS19805;Dbxref=Genbank:WP_004178714.1;Name=WP_004178714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225332.1;locus_tag=LI478_RS19805;product=amino acid ABC transporter permease;protein_id=WP_004178714.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4078991 4079701 . - . ID=gene-LI478_RS19810;Name=LI478_RS19810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19810 NZ_CP085478.1 Protein Homology CDS 4078991 4079701 . - 0 ID=cds-WP_002890061.1;Parent=gene-LI478_RS19810;Dbxref=Genbank:WP_002890061.1;Name=WP_002890061.1;Ontology_term=GO:0071555,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414823.2;locus_tag=LI478_RS19810;product=fimbria/pilus periplasmic chaperone;protein_id=WP_002890061.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4079670 4081313 . - . ID=gene-LI478_RS19815;Name=ecpD;gbkey=Gene;gene=ecpD;gene_biotype=protein_coding;locus_tag=LI478_RS19815 NZ_CP085478.1 Protein Homology CDS 4079670 4081313 . - 0 ID=cds-WP_002890060.1;Parent=gene-LI478_RS19815;Dbxref=Genbank:WP_002890060.1;Name=WP_002890060.1;gbkey=CDS;gene=ecpD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225330.1;locus_tag=LI478_RS19815;product=fimbrial adhesin EcpD;protein_id=WP_002890060.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4081303 4083828 . - . ID=gene-LI478_RS19820;Name=LI478_RS19820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19820 NZ_CP085478.1 Protein Homology CDS 4081303 4083828 . - 0 ID=cds-WP_102007257.1;Parent=gene-LI478_RS19820;Dbxref=Genbank:WP_102007257.1;Name=WP_102007257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225329.1;locus_tag=LI478_RS19820;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_102007257.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4083854 4084522 . - . ID=gene-LI478_RS19825;Name=LI478_RS19825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19825 NZ_CP085478.1 Protein Homology CDS 4083854 4084522 . - 0 ID=cds-WP_004144586.1;Parent=gene-LI478_RS19825;Dbxref=Genbank:WP_004144586.1;Name=WP_004144586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225328.1;locus_tag=LI478_RS19825;product=fimbrial chaperone EcpB;protein_id=WP_004144586.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4084581 4085168 . - . ID=gene-LI478_RS19830;Name=ecpA;gbkey=Gene;gene=ecpA;gene_biotype=protein_coding;gene_synonym=matB;locus_tag=LI478_RS19830 NZ_CP085478.1 Protein Homology CDS 4084581 4085168 . - 0 ID=cds-WP_002890053.1;Parent=gene-LI478_RS19830;Dbxref=Genbank:WP_002890053.1;Name=WP_002890053.1;gbkey=CDS;gene=ecpA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225327.1;locus_tag=LI478_RS19830;product=common pilus major fimbrillin subunit EcpA;protein_id=WP_002890053.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4085243 4085785 . - . ID=gene-LI478_RS19835;Name=LI478_RS19835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19835 NZ_CP085478.1 Protein Homology CDS 4085243 4085785 . - 0 ID=cds-WP_004144585.1;Parent=gene-LI478_RS19835;Dbxref=Genbank:WP_004144585.1;Name=WP_004144585.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225326.1;locus_tag=LI478_RS19835;product=helix-turn-helix transcriptional regulator;protein_id=WP_004144585.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4086633 4087475 . + . ID=gene-LI478_RS19840;Name=phnC;gbkey=Gene;gene=phnC;gene_biotype=protein_coding;locus_tag=LI478_RS19840 NZ_CP085478.1 Protein Homology CDS 4086633 4087475 . + 0 ID=cds-WP_002890003.1;Parent=gene-LI478_RS19840;Dbxref=Genbank:WP_002890003.1;Name=WP_002890003.1;Ontology_term=GO:0015716,GO:0005524,GO:0015416,GO:0009898,GO:0055052;gbkey=CDS;gene=phnC;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ABC-type phosphonate transporter activity|0015416||IEA;go_process=organic phosphonate transport|0015716||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225325.1;locus_tag=LI478_RS19840;product=phosphonate ABC transporter ATP-binding protein;protein_id=WP_002890003.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4087498 4088436 . + . ID=gene-LI478_RS19845;Name=phnD;gbkey=Gene;gene=phnD;gene_biotype=protein_coding;locus_tag=LI478_RS19845 NZ_CP085478.1 Protein Homology CDS 4087498 4088436 . + 0 ID=cds-WP_226339852.1;Parent=gene-LI478_RS19845;Dbxref=Genbank:WP_226339852.1;Name=WP_226339852.1;Ontology_term=GO:0015716,GO:0043190;gbkey=CDS;gene=phnD;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=organic phosphonate transport|0015716||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225324.1;locus_tag=LI478_RS19845;product=phosphonate ABC transporter substrate-binding protein;protein_id=WP_226339852.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4088503 4089375 . + . ID=gene-LI478_RS19850;Name=phnE;gbkey=Gene;gene=phnE;gene_biotype=protein_coding;locus_tag=LI478_RS19850 NZ_CP085478.1 Protein Homology CDS 4088503 4089375 . + 0 ID=cds-WP_032438730.1;Parent=gene-LI478_RS19850;Dbxref=Genbank:WP_032438730.1;Name=WP_032438730.1;Ontology_term=GO:0015716,GO:0015416,GO:0005886,GO:0055052;gbkey=CDS;gene=phnE;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type phosphonate transporter activity|0015416||IEA;go_process=organic phosphonate transport|0015716||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225323.1;locus_tag=LI478_RS19850;product=phosphonate ABC transporter%2C permease protein PhnE;protein_id=WP_032438730.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4089372 4090256 . + . ID=gene-LI478_RS19855;Name=phnE;gbkey=Gene;gene=phnE;gene_biotype=protein_coding;locus_tag=LI478_RS19855 NZ_CP085478.1 Protein Homology CDS 4089372 4090256 . + 0 ID=cds-WP_032414571.1;Parent=gene-LI478_RS19855;Dbxref=Genbank:WP_032414571.1;Name=WP_032414571.1;Ontology_term=GO:0015716,GO:0015416,GO:0005886,GO:0055052;gbkey=CDS;gene=phnE;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type phosphonate transporter activity|0015416||IEA;go_process=organic phosphonate transport|0015716||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225322.1;locus_tag=LI478_RS19855;product=phosphonate ABC transporter%2C permease protein PhnE;protein_id=WP_032414571.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4090576 4090746 . + . ID=gene-LI478_RS19860;Name=LI478_RS19860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19860 NZ_CP085478.1 GeneMarkS-2+ CDS 4090576 4090746 . + 0 ID=cds-WP_077269238.1;Parent=gene-LI478_RS19860;Dbxref=Genbank:WP_077269238.1;Name=WP_077269238.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LI478_RS19860;product=LysR family transcriptional regulator;protein_id=WP_077269238.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4091208 4091873 . - . ID=gene-LI478_RS19865;Name=LI478_RS19865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19865 NZ_CP085478.1 Protein Homology CDS 4091208 4091873 . - 0 ID=cds-WP_004177299.1;Parent=gene-LI478_RS19865;Dbxref=Genbank:WP_004177299.1;Name=WP_004177299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225320.1;locus_tag=LI478_RS19865;product=HAD-IB family hydrolase;protein_id=WP_004177299.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4091969 4092838 . - . ID=gene-LI478_RS19870;Name=LI478_RS19870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19870 NZ_CP085478.1 Protein Homology CDS 4091969 4092838 . - 0 ID=cds-WP_048331625.1;Parent=gene-LI478_RS19870;Dbxref=Genbank:WP_048331625.1;Name=WP_048331625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225319.1;locus_tag=LI478_RS19870;product=DMT family transporter;protein_id=WP_048331625.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4093251 4093817 . + . ID=gene-LI478_RS19875;Name=LI478_RS19875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19875 NZ_CP085478.1 Protein Homology CDS 4093251 4093817 . + 0 ID=cds-WP_004191825.1;Parent=gene-LI478_RS19875;Dbxref=Genbank:WP_004191825.1;Name=WP_004191825.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225318.1;locus_tag=LI478_RS19875;product=NlpC/P60 family protein;protein_id=WP_004191825.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4093862 4094914 . - . ID=gene-LI478_RS19880;Name=phoE;gbkey=Gene;gene=phoE;gene_biotype=protein_coding;locus_tag=LI478_RS19880 NZ_CP085478.1 Protein Homology CDS 4093862 4094914 . - 0 ID=cds-WP_004144576.1;Parent=gene-LI478_RS19880;Dbxref=Genbank:WP_004144576.1;Name=WP_004144576.1;Ontology_term=GO:0034220,GO:0015288,GO:0016020;gbkey=CDS;gene=phoE;go_component=membrane|0016020||IEA;go_function=porin activity|0015288||IEA;go_process=ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225317.1;locus_tag=LI478_RS19880;product=phosphoporin PhoE;protein_id=WP_004144576.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4095204 4096307 . + . ID=gene-LI478_RS19885;Name=proB;gbkey=Gene;gene=proB;gene_biotype=protein_coding;locus_tag=LI478_RS19885 NZ_CP085478.1 Protein Homology CDS 4095204 4096307 . + 0 ID=cds-WP_004144574.1;Parent=gene-LI478_RS19885;Dbxref=Genbank:WP_004144574.1;Name=WP_004144574.1;Ontology_term=GO:0006561,GO:0004349;gbkey=CDS;gene=proB;go_function=glutamate 5-kinase activity|0004349||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225315.1;locus_tag=LI478_RS19885;product=glutamate 5-kinase;protein_id=WP_004144574.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4096318 4097571 . + . ID=gene-LI478_RS19890;Name=proA;gbkey=Gene;gene=proA;gene_biotype=protein_coding;locus_tag=LI478_RS19890 NZ_CP085478.1 Protein Homology CDS 4096318 4097571 . + 0 ID=cds-WP_004147253.1;Parent=gene-LI478_RS19890;Dbxref=Genbank:WP_004147253.1;Name=WP_004147253.1;Ontology_term=GO:0006561,GO:0004350;gbkey=CDS;gene=proA;go_function=glutamate-5-semialdehyde dehydrogenase activity|0004350||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225314.1;locus_tag=LI478_RS19890;product=glutamate-5-semialdehyde dehydrogenase;protein_id=WP_004147253.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4097685 4097757 . + . ID=gene-LI478_RS19895;Name=LI478_RS19895;gbkey=Gene;gene_biotype=tRNA;locus_tag=LI478_RS19895 NZ_CP085478.1 tRNAscan-SE tRNA 4097685 4097757 . + . ID=rna-LI478_RS19895;Parent=gene-LI478_RS19895;anticodon=(pos:4097718..4097720);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS19895;product=tRNA-Thr NZ_CP085478.1 tRNAscan-SE exon 4097685 4097757 . + . ID=exon-LI478_RS19895-1;Parent=rna-LI478_RS19895;anticodon=(pos:4097718..4097720);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS19895;product=tRNA-Thr NZ_CP085478.1 RefSeq gene 4098592 4099320 . - . ID=gene-LI478_RS19900;Name=LI478_RS19900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19900 NZ_CP085478.1 Protein Homology CDS 4098592 4099320 . - 0 ID=cds-WP_004222857.1;Parent=gene-LI478_RS19900;Dbxref=Genbank:WP_004222857.1;Name=WP_004222857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004222857.1;locus_tag=LI478_RS19900;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_004222857.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4099339 4100100 . - . ID=gene-LI478_RS19905;Name=LI478_RS19905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19905 NZ_CP085478.1 Protein Homology CDS 4099339 4100100 . - 0 ID=cds-WP_040226169.1;Parent=gene-LI478_RS19905;Dbxref=Genbank:WP_040226169.1;Name=WP_040226169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012968869.1;locus_tag=LI478_RS19905;product=amino acid ABC transporter permease;protein_id=WP_040226169.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4100106 4100801 . - . ID=gene-LI478_RS19910;Name=LI478_RS19910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19910 NZ_CP085478.1 Protein Homology CDS 4100106 4100801 . - 0 ID=cds-WP_004222853.1;Parent=gene-LI478_RS19910;Dbxref=Genbank:WP_004222853.1;Name=WP_004222853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004222853.1;locus_tag=LI478_RS19910;product=amino acid ABC transporter permease;protein_id=WP_004222853.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4100825 4101577 . - . ID=gene-LI478_RS19915;Name=LI478_RS19915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19915 NZ_CP085478.1 Protein Homology CDS 4100825 4101577 . - 0 ID=cds-WP_009485112.1;Parent=gene-LI478_RS19915;Dbxref=Genbank:WP_009485112.1;Name=WP_009485112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004222850.1;locus_tag=LI478_RS19915;product=SDR family oxidoreductase;protein_id=WP_009485112.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4101691 4102131 . - . ID=gene-LI478_RS19920;Name=LI478_RS19920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19920 NZ_CP085478.1 Protein Homology CDS 4101691 4102131 . - 0 ID=cds-WP_016530499.1;Parent=gene-LI478_RS19920;Dbxref=Genbank:WP_016530499.1;Name=WP_016530499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016530499.1;locus_tag=LI478_RS19920;product=acetyl-CoA carboxylase biotin carboxyl carrier protein subunit;protein_id=WP_016530499.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4102249 4103172 . - . ID=gene-LI478_RS19925;Name=nac;gbkey=Gene;gene=nac;gene_biotype=protein_coding;locus_tag=LI478_RS19925 NZ_CP085478.1 Protein Homology CDS 4102249 4103172 . - 0 ID=cds-WP_004222846.1;Parent=gene-LI478_RS19925;Dbxref=Genbank:WP_004222846.1;Name=WP_004222846.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=nac;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017798945.1;locus_tag=LI478_RS19925;product=nitrogen assimilation transcriptional regulator NAC;protein_id=WP_004222846.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4103528 4104730 . + . ID=gene-LI478_RS19930;Name=LI478_RS19930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19930 NZ_CP085478.1 Protein Homology CDS 4103528 4104730 . + 0 ID=cds-WP_004222844.1;Parent=gene-LI478_RS19930;Dbxref=Genbank:WP_004222844.1;Name=WP_004222844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004222844.1;locus_tag=LI478_RS19930;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_004222844.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4104955 4105725 . - . ID=gene-LI478_RS19935;Name=LI478_RS19935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19935 NZ_CP085478.1 Protein Homology CDS 4104955 4105725 . - 0 ID=cds-WP_004222843.1;Parent=gene-LI478_RS19935;Dbxref=Genbank:WP_004222843.1;Name=WP_004222843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004222843.1;locus_tag=LI478_RS19935;product=5-oxoprolinase subunit PxpA;protein_id=WP_004222843.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4105736 4106722 . - . ID=gene-LI478_RS19940;Name=LI478_RS19940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19940 NZ_CP085478.1 Protein Homology CDS 4105736 4106722 . - 0 ID=cds-WP_004222841.1;Parent=gene-LI478_RS19940;Dbxref=Genbank:WP_004222841.1;Name=WP_004222841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016529973.1;locus_tag=LI478_RS19940;product=biotin-dependent carboxyltransferase family protein;protein_id=WP_004222841.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4106719 4107426 . - . ID=gene-LI478_RS19945;Name=pxpB;gbkey=Gene;gene=pxpB;gene_biotype=protein_coding;locus_tag=LI478_RS19945 NZ_CP085478.1 Protein Homology CDS 4106719 4107426 . - 0 ID=cds-WP_009485116.1;Parent=gene-LI478_RS19945;Dbxref=Genbank:WP_009485116.1;Name=WP_009485116.1;gbkey=CDS;gene=pxpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009485116.1;locus_tag=LI478_RS19945;product=5-oxoprolinase subunit PxpB;protein_id=WP_009485116.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4107429 4108268 . - . ID=gene-LI478_RS19950;Name=LI478_RS19950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19950 NZ_CP085478.1 Protein Homology CDS 4107429 4108268 . - 0 ID=cds-WP_004222836.1;Parent=gene-LI478_RS19950;Dbxref=Genbank:WP_004222836.1;Name=WP_004222836.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004222836.1;locus_tag=LI478_RS19950;product=transporter substrate-binding domain-containing protein;protein_id=WP_004222836.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4108566 4109486 . + . ID=gene-LI478_RS19955;Name=LI478_RS19955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19955 NZ_CP085478.1 Protein Homology CDS 4108566 4109486 . + 0 ID=cds-WP_009485117.1;Parent=gene-LI478_RS19955;Dbxref=Genbank:WP_009485117.1;Name=WP_009485117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012968872.1;locus_tag=LI478_RS19955;product=DMT family transporter;protein_id=WP_009485117.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4109547 4110818 . - . ID=gene-LI478_RS19960;Name=LI478_RS19960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19960 NZ_CP085478.1 Protein Homology CDS 4109547 4110818 . - 0 ID=cds-WP_004222831.1;Parent=gene-LI478_RS19960;Dbxref=Genbank:WP_004222831.1;Name=WP_004222831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004222831.1;locus_tag=LI478_RS19960;product=Glu/Leu/Phe/Val dehydrogenase;protein_id=WP_004222831.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4110899 4112245 . - . ID=gene-LI478_RS19965;Name=accC;gbkey=Gene;gene=accC;gene_biotype=protein_coding;locus_tag=LI478_RS19965 NZ_CP085478.1 Protein Homology CDS 4110899 4112245 . - 0 ID=cds-WP_004222829.1;Parent=gene-LI478_RS19965;Dbxref=Genbank:WP_004222829.1;Name=WP_004222829.1;Ontology_term=GO:0006633,GO:0003989,GO:0004075,GO:0009317;gbkey=CDS;gene=accC;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA,biotin carboxylase activity|0004075||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004222829.1;locus_tag=LI478_RS19965;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=WP_004222829.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4112254 4112709 . - . ID=gene-LI478_RS19970;Name=accB;gbkey=Gene;gene=accB;gene_biotype=protein_coding;locus_tag=LI478_RS19970 NZ_CP085478.1 Protein Homology CDS 4112254 4112709 . - 0 ID=cds-WP_064153231.1;Parent=gene-LI478_RS19970;Dbxref=Genbank:WP_064153231.1;Name=WP_064153231.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accB;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004868302.1;locus_tag=LI478_RS19970;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;protein_id=WP_064153231.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4113082 4115727 . - . ID=gene-LI478_RS19975;Name=LI478_RS19975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19975 NZ_CP085478.1 Protein Homology CDS 4113082 4115727 . - 0 ID=cds-WP_163596084.1;Parent=gene-LI478_RS19975;Dbxref=Genbank:WP_163596084.1;Name=WP_163596084.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225299.1;locus_tag=LI478_RS19975;product=LuxR C-terminal-related transcriptional regulator;protein_id=WP_163596084.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4116101 4117060 . + . ID=gene-LI478_RS19980;Name=LI478_RS19980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19980 NZ_CP085478.1 Protein Homology CDS 4116101 4117060 . + 0 ID=cds-WP_227394151.1;Parent=gene-LI478_RS19980;Dbxref=Genbank:WP_227394151.1;Name=WP_227394151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225298.1;locus_tag=LI478_RS19980;product=thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha;protein_id=WP_227394151.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4117072 4118091 . + . ID=gene-LI478_RS19985;Name=LI478_RS19985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19985 NZ_CP085478.1 Protein Homology CDS 4117072 4118091 . + 0 ID=cds-WP_048331617.1;Parent=gene-LI478_RS19985;Dbxref=Genbank:WP_048331617.1;Name=WP_048331617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225297.1;locus_tag=LI478_RS19985;product=alpha-ketoacid dehydrogenase subunit beta;protein_id=WP_048331617.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4118095 4119630 . + . ID=gene-LI478_RS19990;Name=LI478_RS19990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS19990 NZ_CP085478.1 Protein Homology CDS 4118095 4119630 . + 0 ID=cds-WP_048331616.1;Parent=gene-LI478_RS19990;Dbxref=Genbank:WP_048331616.1;Name=WP_048331616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225296.1;locus_tag=LI478_RS19990;product=2-oxo acid dehydrogenase subunit E2;protein_id=WP_048331616.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4119620 4121017 . + . ID=gene-LI478_RS19995;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=LI478_RS19995 NZ_CP085478.1 Protein Homology CDS 4119620 4121017 . + 0 ID=cds-WP_032414554.1;Parent=gene-LI478_RS19995;Dbxref=Genbank:WP_032414554.1;Name=WP_032414554.1;Ontology_term=GO:0006096,GO:0045454,GO:0051068,GO:0004148;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase activity|0004148||IEA;go_process=glycolytic process|0006096||IEA,cell redox homeostasis|0045454||IEA,dihydrolipoamide metabolic process|0051068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225295.1;locus_tag=LI478_RS19995;product=dihydrolipoyl dehydrogenase;protein_id=WP_032414554.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4121359 4121823 . - . ID=gene-LI478_RS20000;Name=LI478_RS20000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS20000 NZ_CP085478.1 Protein Homology CDS 4121359 4121823 . - 0 ID=cds-WP_004191854.1;Parent=gene-LI478_RS20000;Dbxref=Genbank:WP_004191854.1;Name=WP_004191854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004222817.1;locus_tag=LI478_RS20000;product=HNH endonuclease signature motif containing protein;protein_id=WP_004191854.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4122042 4122680 . + . ID=gene-LI478_RS20005;Name=LI478_RS20005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS20005 NZ_CP085478.1 Protein Homology CDS 4122042 4122680 . + 0 ID=cds-WP_002889850.1;Parent=gene-LI478_RS20005;Dbxref=Genbank:WP_002889850.1;Name=WP_002889850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225287.1;locus_tag=LI478_RS20005;product=glutathione S-transferase family protein;protein_id=WP_002889850.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4122721 4123470 . - . ID=gene-LI478_RS20010;Name=LI478_RS20010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS20010 NZ_CP085478.1 Protein Homology CDS 4122721 4123470 . - 0 ID=cds-WP_002889849.1;Parent=gene-LI478_RS20010;Dbxref=Genbank:WP_002889849.1;Name=WP_002889849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225286.1;locus_tag=LI478_RS20010;product=class I SAM-dependent methyltransferase;protein_id=WP_002889849.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4123528 4123785 . - . ID=gene-LI478_RS20015;Name=LI478_RS20015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS20015 NZ_CP085478.1 Protein Homology CDS 4123528 4123785 . - 0 ID=cds-WP_002889848.1;Parent=gene-LI478_RS20015;Dbxref=Genbank:WP_002889848.1;Name=WP_002889848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225285.1;locus_tag=LI478_RS20015;product=YjhX family toxin;protein_id=WP_002889848.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4124247 4125224 . + . ID=gene-LI478_RS20020;Name=glaH;gbkey=Gene;gene=glaH;gene_biotype=protein_coding;locus_tag=LI478_RS20020 NZ_CP085478.1 Protein Homology CDS 4124247 4125224 . + 0 ID=cds-WP_002889847.1;Parent=gene-LI478_RS20020;Dbxref=Genbank:WP_002889847.1;Name=WP_002889847.1;Ontology_term=GO:0050498;gbkey=CDS;gene=glaH;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C with 2-oxoglutarate as one donor%2C and the other dehydrogenated|0050498||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417145.4;locus_tag=LI478_RS20020;product=glutarate dioxygenase GlaH;protein_id=WP_002889847.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4125252 4126520 . + . ID=gene-LI478_RS20025;Name=lhgO;gbkey=Gene;gene=lhgO;gene_biotype=protein_coding;locus_tag=LI478_RS20025 NZ_CP085478.1 Protein Homology CDS 4125252 4126520 . + 0 ID=cds-WP_002889846.1;Parent=gene-LI478_RS20025;Dbxref=Genbank:WP_002889846.1;Name=WP_002889846.1;Ontology_term=GO:0016491;gbkey=CDS;gene=lhgO;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225283.1;locus_tag=LI478_RS20025;product=L-2-hydroxyglutarate oxidase;protein_id=WP_002889846.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4126546 4127994 . + . ID=gene-LI478_RS20030;Name=gabD;gbkey=Gene;gene=gabD;gene_biotype=protein_coding;locus_tag=LI478_RS20030 NZ_CP085478.1 Protein Homology CDS 4126546 4127994 . + 0 ID=cds-WP_004178683.1;Parent=gene-LI478_RS20030;Dbxref=Genbank:WP_004178683.1;Name=WP_004178683.1;Ontology_term=GO:0009450,GO:0009013;gbkey=CDS;gene=gabD;go_function=succinate-semialdehyde dehydrogenase [NAD(P)+] activity|0009013||IEA;go_process=gamma-aminobutyric acid catabolic process|0009450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225282.1;locus_tag=LI478_RS20030;product=NADP-dependent succinate-semialdehyde dehydrogenase;protein_id=WP_004178683.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4128007 4129290 . + . ID=gene-LI478_RS20035;Name=gabT;gbkey=Gene;gene=gabT;gene_biotype=protein_coding;locus_tag=LI478_RS20035 NZ_CP085478.1 Protein Homology CDS 4128007 4129290 . + 0 ID=cds-WP_004147193.1;Parent=gene-LI478_RS20035;Dbxref=Genbank:WP_004147193.1;Name=WP_004147193.1;Ontology_term=GO:0009448,GO:0003867,GO:0030170;gbkey=CDS;gene=gabT;go_function=4-aminobutyrate transaminase activity|0003867||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=gamma-aminobutyric acid metabolic process|0009448||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225281.1;locus_tag=LI478_RS20035;product=4-aminobutyrate--2-oxoglutarate transaminase;protein_id=WP_004147193.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4129440 4130828 . + . ID=gene-LI478_RS20040;Name=gabP;gbkey=Gene;gene=gabP;gene_biotype=protein_coding;locus_tag=LI478_RS20040 NZ_CP085478.1 Protein Homology CDS 4129440 4130828 . + 0 ID=cds-WP_226339853.1;Parent=gene-LI478_RS20040;Dbxref=Genbank:WP_226339853.1;Name=WP_226339853.1;Ontology_term=GO:0006865,GO:0015185,GO:0016020;gbkey=CDS;gene=gabP;go_component=membrane|0016020||IEA;go_function=gamma-aminobutyric acid transmembrane transporter activity|0015185||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225280.1;locus_tag=LI478_RS20040;product=GABA permease;protein_id=WP_226339853.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4130874 4131566 . + . ID=gene-LI478_RS20045;Name=csiR;gbkey=Gene;gene=csiR;gene_biotype=protein_coding;locus_tag=LI478_RS20045 NZ_CP085478.1 Protein Homology CDS 4130874 4131566 . + 0 ID=cds-WP_023302285.1;Parent=gene-LI478_RS20045;Dbxref=Genbank:WP_023302285.1;Name=WP_023302285.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=csiR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225279.1;locus_tag=LI478_RS20045;product=DNA-binding transcriptional regulator CsiR;protein_id=WP_023302285.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4131652 4132050 . - . ID=gene-LI478_RS20050;Name=crl;gbkey=Gene;gene=crl;gene_biotype=protein_coding;locus_tag=LI478_RS20050 NZ_CP085478.1 Protein Homology CDS 4131652 4132050 . - 0 ID=cds-WP_002889793.1;Parent=gene-LI478_RS20050;Dbxref=Genbank:WP_002889793.1;Name=WP_002889793.1;Ontology_term=GO:0045893;gbkey=CDS;gene=crl;go_process=positive regulation of DNA-templated transcription|0045893||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225278.1;locus_tag=LI478_RS20050;product=sigma factor-binding protein Crl;protein_id=WP_002889793.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4132108 4133352 . - . ID=gene-LI478_RS20055;Name=frsA;gbkey=Gene;gene=frsA;gene_biotype=protein_coding;locus_tag=LI478_RS20055 NZ_CP085478.1 Protein Homology CDS 4132108 4133352 . - 0 ID=cds-WP_040249722.1;Parent=gene-LI478_RS20055;Dbxref=Genbank:WP_040249722.1;Name=WP_040249722.1;Ontology_term=GO:0016788;gbkey=CDS;gene=frsA;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225277.1;locus_tag=LI478_RS20055;product=esterase FrsA;protein_id=WP_040249722.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4133458 4133916 . - . ID=gene-LI478_RS20060;Name=gpt;gbkey=Gene;gene=gpt;gene_biotype=protein_coding;locus_tag=LI478_RS20060 NZ_CP085478.1 Protein Homology CDS 4133458 4133916 . - 0 ID=cds-WP_002889733.1;Parent=gene-LI478_RS20060;Dbxref=Genbank:WP_002889733.1;Name=WP_002889733.1;Ontology_term=GO:0009116,GO:0000310;gbkey=CDS;gene=gpt;go_function=xanthine phosphoribosyltransferase activity|0000310||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225276.1;locus_tag=LI478_RS20060;product=xanthine phosphoribosyltransferase;protein_id=WP_002889733.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4134174 4135631 . + . ID=gene-LI478_RS20065;Name=pepD;gbkey=Gene;gene=pepD;gene_biotype=protein_coding;locus_tag=LI478_RS20065 NZ_CP085478.1 Protein Homology CDS 4134174 4135631 . + 0 ID=cds-WP_004152033.1;Parent=gene-LI478_RS20065;Dbxref=Genbank:WP_004152033.1;Name=WP_004152033.1;Ontology_term=GO:0006508,GO:0016787;gbkey=CDS;gene=pepD;go_function=hydrolase activity|0016787||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225275.1;locus_tag=LI478_RS20065;product=cytosol nonspecific dipeptidase;protein_id=WP_004152033.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4135674 4136126 . - . ID=gene-LI478_RS20070;Name=LI478_RS20070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS20070 NZ_CP085478.1 Protein Homology CDS 4135674 4136126 . - 0 ID=cds-WP_004145818.1;Parent=gene-LI478_RS20070;Dbxref=Genbank:WP_004145818.1;Name=WP_004145818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225274.1;locus_tag=LI478_RS20070;product=GNAT family N-acetyltransferase;protein_id=WP_004145818.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4136129 4137184 . - . ID=gene-LI478_RS20075;Name=dinB;gbkey=Gene;gene=dinB;gene_biotype=protein_coding;locus_tag=LI478_RS20075 NZ_CP085478.1 Protein Homology CDS 4136129 4137184 . - 0 ID=cds-WP_002889726.1;Parent=gene-LI478_RS20075;Dbxref=Genbank:WP_002889726.1;Name=WP_002889726.1;Ontology_term=GO:0006281,GO:0003684,GO:0003887;gbkey=CDS;gene=dinB;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225273.1;locus_tag=LI478_RS20075;product=DNA polymerase IV;protein_id=WP_002889726.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4137344 4138204 . + . ID=gene-LI478_RS20080;Name=LI478_RS20080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS20080 NZ_CP085478.1 Protein Homology CDS 4137344 4138204 . + 0 ID=cds-WP_002889724.1;Parent=gene-LI478_RS20080;Dbxref=Genbank:WP_002889724.1;Name=WP_002889724.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225272.1;locus_tag=LI478_RS20080;product=glycerophosphodiester phosphodiesterase family protein;protein_id=WP_002889724.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4138427 4138642 . - . ID=gene-LI478_RS20085;Name=nqrM;gbkey=Gene;gene=nqrM;gene_biotype=protein_coding;locus_tag=LI478_RS20085 NZ_CP085478.1 Protein Homology CDS 4138427 4138642 . - 0 ID=cds-WP_002889722.1;Parent=gene-LI478_RS20085;Dbxref=Genbank:WP_002889722.1;Name=WP_002889722.1;gbkey=CDS;gene=nqrM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225271.1;locus_tag=LI478_RS20085;product=(Na+)-NQR maturation NqrM;protein_id=WP_002889722.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4138645 4139868 . - . ID=gene-LI478_RS20090;Name=nqrF;gbkey=Gene;gene=nqrF;gene_biotype=protein_coding;locus_tag=LI478_RS20090 NZ_CP085478.1 Protein Homology CDS 4138645 4139868 . - 0 ID=cds-WP_002889720.1;Parent=gene-LI478_RS20090;Dbxref=Genbank:WP_002889720.1;Name=WP_002889720.1;Ontology_term=GO:0006814,GO:0016655;gbkey=CDS;gene=nqrF;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225270.1;locus_tag=LI478_RS20090;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit F;protein_id=WP_002889720.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4139881 4140477 . - . ID=gene-LI478_RS20095;Name=nqrE;gbkey=Gene;gene=nqrE;gene_biotype=protein_coding;locus_tag=LI478_RS20095 NZ_CP085478.1 Protein Homology CDS 4139881 4140477 . - 0 ID=cds-WP_004177335.1;Parent=gene-LI478_RS20095;Dbxref=Genbank:WP_004177335.1;Name=WP_004177335.1;Ontology_term=GO:0006814,GO:0016655;gbkey=CDS;gene=nqrE;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225269.1;locus_tag=LI478_RS20095;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit E;protein_id=WP_004177335.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4140484 4141122 . - . ID=gene-LI478_RS20100;Name=LI478_RS20100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS20100 NZ_CP085478.1 Protein Homology CDS 4140484 4141122 . - 0 ID=cds-WP_002889716.1;Parent=gene-LI478_RS20100;Dbxref=Genbank:WP_002889716.1;Name=WP_002889716.1;Ontology_term=GO:0016655,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225268.1;locus_tag=LI478_RS20100;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit D;protein_id=WP_002889716.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4141115 4141909 . - . ID=gene-LI478_RS20105;Name=LI478_RS20105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS20105 NZ_CP085478.1 Protein Homology CDS 4141115 4141909 . - 0 ID=cds-WP_004177336.1;Parent=gene-LI478_RS20105;Dbxref=Genbank:WP_004177336.1;Name=WP_004177336.1;Ontology_term=GO:0006814,GO:0016655,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225267.1;locus_tag=LI478_RS20105;product=Na(+)-translocating NADH-quinone reductase subunit C;protein_id=WP_004177336.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4141902 4143140 . - . ID=gene-LI478_RS20110;Name=LI478_RS20110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS20110 NZ_CP085478.1 Protein Homology CDS 4141902 4143140 . - 0 ID=cds-WP_002889703.1;Parent=gene-LI478_RS20110;Dbxref=Genbank:WP_002889703.1;Name=WP_002889703.1;Ontology_term=GO:0022904,GO:0055085,GO:0010181,GO:0016655,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=FMN binding|0010181||IEA,oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;go_process=respiratory electron transport chain|0022904||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225266.1;locus_tag=LI478_RS20110;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit B;protein_id=WP_002889703.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4143144 4144487 . - . ID=gene-LI478_RS20115;Name=LI478_RS20115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS20115 NZ_CP085478.1 Protein Homology CDS 4143144 4144487 . - 0 ID=cds-WP_002889702.1;Parent=gene-LI478_RS20115;Dbxref=Genbank:WP_002889702.1;Name=WP_002889702.1;Ontology_term=GO:0006814,GO:0016655;gbkey=CDS;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225265.1;locus_tag=LI478_RS20115;product=Na(+)-translocating NADH-quinone reductase subunit A;protein_id=WP_002889702.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4144899 4145639 . + . ID=gene-LI478_RS20120;Name=dpaA;gbkey=Gene;gene=dpaA;gene_biotype=protein_coding;locus_tag=LI478_RS20120 NZ_CP085478.1 Protein Homology CDS 4144899 4145639 . + 0 ID=cds-WP_002889699.1;Parent=gene-LI478_RS20120;Dbxref=Genbank:WP_002889699.1;Name=WP_002889699.1;gbkey=CDS;gene=dpaA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225264.1;locus_tag=LI478_RS20120;product=peptidoglycan meso-diaminopimelic acid protein amidase;protein_id=WP_002889699.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4145610 4146377 . - . ID=gene-LI478_RS20125;Name=LI478_RS20125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS20125 NZ_CP085478.1 Protein Homology CDS 4145610 4146377 . - 0 ID=cds-WP_002889696.1;Parent=gene-LI478_RS20125;Dbxref=Genbank:WP_002889696.1;Name=WP_002889696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225263.1;locus_tag=LI478_RS20125;product=class II glutamine amidotransferase;protein_id=WP_002889696.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4146452 4147033 . - . ID=gene-LI478_RS20130;Name=lpcA;gbkey=Gene;gene=lpcA;gene_biotype=protein_coding;locus_tag=LI478_RS20130 NZ_CP085478.1 Protein Homology CDS 4146452 4147033 . - 0 ID=cds-WP_004145825.1;Parent=gene-LI478_RS20130;Dbxref=Genbank:WP_004145825.1;Name=WP_004145825.1;Ontology_term=GO:1901135,GO:0008968;gbkey=CDS;gene=lpcA;go_function=D-sedoheptulose 7-phosphate isomerase activity|0008968||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225262.1;locus_tag=LI478_RS20130;product=D-sedoheptulose 7-phosphate isomerase;protein_id=WP_004145825.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4147273 4149717 . + . ID=gene-LI478_RS20135;Name=fadE;gbkey=Gene;gene=fadE;gene_biotype=protein_coding;locus_tag=LI478_RS20135 NZ_CP085478.1 Protein Homology CDS 4147273 4149717 . + 0 ID=cds-WP_227394152.1;Parent=gene-LI478_RS20135;Dbxref=Genbank:WP_227394152.1;Name=WP_227394152.1;Ontology_term=GO:0033539,GO:0003995,GO:0050660;gbkey=CDS;gene=fadE;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=fatty acid beta-oxidation using acyl-CoA dehydrogenase|0033539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225261.1;locus_tag=LI478_RS20135;product=acyl-CoA dehydrogenase FadE;protein_id=WP_227394152.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4149896 4150666 . + . ID=gene-LI478_RS20140;Name=LI478_RS20140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS20140 NZ_CP085478.1 Protein Homology CDS 4149896 4150666 . + 0 ID=cds-WP_002889689.1;Parent=gene-LI478_RS20140;Dbxref=Genbank:WP_002889689.1;Name=WP_002889689.1;Ontology_term=GO:0006807;gbkey=CDS;go_process=nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004178673.1;locus_tag=LI478_RS20140;product=amidohydrolase;protein_id=WP_002889689.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4150697 4151287 . - . ID=gene-LI478_RS20145;Name=eamB;gbkey=Gene;gene=eamB;gene_biotype=protein_coding;locus_tag=LI478_RS20145 NZ_CP085478.1 Protein Homology CDS 4150697 4151287 . - 0 ID=cds-WP_004177339.1;Parent=gene-LI478_RS20145;Dbxref=Genbank:WP_004177339.1;Name=WP_004177339.1;gbkey=CDS;gene=eamB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225259.1;locus_tag=LI478_RS20145;product=cysteine/O-acetylserine transporter;protein_id=WP_004177339.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4151391 4152272 . + . ID=gene-LI478_RS20150;Name=LI478_RS20150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS20150 NZ_CP085478.1 Protein Homology CDS 4151391 4152272 . + 0 ID=cds-WP_021464596.1;Parent=gene-LI478_RS20150;Dbxref=Genbank:WP_021464596.1;Name=WP_021464596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225258.1;locus_tag=LI478_RS20150;product=LysR family transcriptional regulator;protein_id=WP_021464596.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4152332 4152408 . - . ID=gene-LI478_RS20155;Name=LI478_RS20155;gbkey=Gene;gene_biotype=tRNA;locus_tag=LI478_RS20155 NZ_CP085478.1 tRNAscan-SE tRNA 4152332 4152408 . - . ID=rna-LI478_RS20155;Parent=gene-LI478_RS20155;anticodon=(pos:complement(4152372..4152374));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS20155;product=tRNA-Asp NZ_CP085478.1 tRNAscan-SE exon 4152332 4152408 . - . ID=exon-LI478_RS20155-1;Parent=rna-LI478_RS20155;anticodon=(pos:complement(4152372..4152374));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS20155;product=tRNA-Asp NZ_CP085478.1 RefSeq gene 4152542 4153273 . - . ID=gene-LI478_RS20160;Name=dnaQ;gbkey=Gene;gene=dnaQ;gene_biotype=protein_coding;locus_tag=LI478_RS20160 NZ_CP085478.1 Protein Homology CDS 4152542 4153273 . - 0 ID=cds-WP_004152034.1;Parent=gene-LI478_RS20160;Dbxref=Genbank:WP_004152034.1;Name=WP_004152034.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=dnaQ;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225257.1;locus_tag=LI478_RS20160;product=DNA polymerase III subunit epsilon;protein_id=WP_004152034.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4153338 4153805 . + . ID=gene-LI478_RS20165;Name=rnhA;gbkey=Gene;gene=rnhA;gene_biotype=protein_coding;locus_tag=LI478_RS20165 NZ_CP085478.1 Protein Homology CDS 4153338 4153805 . + 0 ID=cds-WP_048331612.1;Parent=gene-LI478_RS20165;Dbxref=Genbank:WP_048331612.1;Name=WP_048331612.1;Ontology_term=GO:0003676,GO:0004523;gbkey=CDS;gene=rnhA;go_function=nucleic acid binding|0003676||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225256.1;locus_tag=LI478_RS20165;product=ribonuclease HI;protein_id=WP_048331612.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4153802 4154524 . - . ID=gene-LI478_RS20170;Name=LI478_RS20170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS20170 NZ_CP085478.1 Protein Homology CDS 4153802 4154524 . - 0 ID=cds-WP_002889685.1;Parent=gene-LI478_RS20170;Dbxref=Genbank:WP_002889685.1;Name=WP_002889685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008805254.1;locus_tag=LI478_RS20170;product=class I SAM-dependent methyltransferase;protein_id=WP_002889685.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4154557 4155312 . + . ID=gene-LI478_RS20175;Name=gloB;gbkey=Gene;gene=gloB;gene_biotype=protein_coding;locus_tag=LI478_RS20175 NZ_CP085478.1 Protein Homology CDS 4154557 4155312 . + 0 ID=cds-WP_004145833.1;Parent=gene-LI478_RS20175;Dbxref=Genbank:WP_004145833.1;Name=WP_004145833.1;Ontology_term=GO:0019243,GO:0004416;gbkey=CDS;gene=gloB;go_function=hydroxyacylglutathione hydrolase activity|0004416||IEA;go_process=methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione|0019243||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225254.1;locus_tag=LI478_RS20175;product=hydroxyacylglutathione hydrolase;protein_id=WP_004145833.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4155384 4156751 . + . ID=gene-LI478_RS20180;Name=mltD;gbkey=Gene;gene=mltD;gene_biotype=protein_coding;locus_tag=LI478_RS20180 NZ_CP085478.1 Protein Homology CDS 4155384 4156751 . + 0 ID=cds-WP_002889632.1;Parent=gene-LI478_RS20180;Dbxref=Genbank:WP_002889632.1;Name=WP_002889632.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltD;go_component=membrane|0016020||IEA;go_function=lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459258.1;locus_tag=LI478_RS20180;product=murein transglycosylase D;protein_id=WP_002889632.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4156809 4157579 . - . ID=gene-LI478_RS20185;Name=LI478_RS20185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS20185 NZ_CP085478.1 Protein Homology CDS 4156809 4157579 . - 0 ID=cds-WP_064153224.1;Parent=gene-LI478_RS20185;Dbxref=Genbank:WP_064153224.1;Name=WP_064153224.1;Ontology_term=GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225252.1;locus_tag=LI478_RS20185;product=class I SAM-dependent methyltransferase;protein_id=WP_064153224.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4157671 4158468 . - . ID=gene-LI478_RS20190;Name=LI478_RS20190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS20190 NZ_CP085478.1 Protein Homology CDS 4157671 4158468 . - 0 ID=cds-WP_002889629.1;Parent=gene-LI478_RS20190;Dbxref=Genbank:WP_002889629.1;Name=WP_002889629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225251.1;locus_tag=LI478_RS20190;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WP_002889629.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4158571 4159761 . - . ID=gene-LI478_RS20195;Name=LI478_RS20195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS20195 NZ_CP085478.1 Protein Homology CDS 4158571 4159761 . - 0 ID=cds-WP_064153222.1;Parent=gene-LI478_RS20195;Dbxref=Genbank:WP_064153222.1;Name=WP_064153222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225250.1;locus_tag=LI478_RS20195;product=MFS transporter;protein_id=WP_064153222.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4159866 4160771 . + . ID=gene-LI478_RS20200;Name=yafC;gbkey=Gene;gene=yafC;gene_biotype=protein_coding;locus_tag=LI478_RS20200 NZ_CP085478.1 Protein Homology CDS 4159866 4160771 . + 0 ID=cds-WP_002889616.1;Parent=gene-LI478_RS20200;Dbxref=Genbank:WP_002889616.1;Name=WP_002889616.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yafC;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225249.1;locus_tag=LI478_RS20200;product=DNA-binding transcriptional regulator YafC;protein_id=WP_002889616.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4160817 4161620 . - . ID=gene-LI478_RS20205;Name=dkgB;gbkey=Gene;gene=dkgB;gene_biotype=protein_coding;locus_tag=LI478_RS20205 NZ_CP085478.1 Protein Homology CDS 4160817 4161620 . - 0 ID=cds-WP_023316468.1;Parent=gene-LI478_RS20205;Dbxref=Genbank:WP_023316468.1;Name=WP_023316468.1;Ontology_term=GO:0047834;gbkey=CDS;gene=dkgB;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225248.1;locus_tag=LI478_RS20205;product=2%2C5-didehydrogluconate reductase DkgB;protein_id=WP_023316468.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4161785 4161861 . - . ID=gene-LI478_RS20210;Name=LI478_RS20210;gbkey=Gene;gene_biotype=tRNA;locus_tag=LI478_RS20210 NZ_CP085478.1 tRNAscan-SE tRNA 4161785 4161861 . - . ID=rna-LI478_RS20210;Parent=gene-LI478_RS20210;anticodon=(pos:complement(4161825..4161827));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS20210;product=tRNA-Asp NZ_CP085478.1 tRNAscan-SE exon 4161785 4161861 . - . ID=exon-LI478_RS20210-1;Parent=rna-LI478_RS20210;anticodon=(pos:complement(4161825..4161827));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS20210;product=tRNA-Asp NZ_CP085478.1 RefSeq gene 4161919 4162034 . - . ID=gene-LI478_RS20215;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=LI478_RS20215 NZ_CP085478.1 cmsearch rRNA 4161919 4162034 . - . ID=rna-LI478_RS20215;Parent=gene-LI478_RS20215;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LI478_RS20215;product=5S ribosomal RNA NZ_CP085478.1 cmsearch exon 4161919 4162034 . - . ID=exon-LI478_RS20215-1;Parent=rna-LI478_RS20215;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LI478_RS20215;product=5S ribosomal RNA NZ_CP085478.1 RefSeq gene 4162225 4165126 . - . ID=gene-LI478_RS20220;Name=LI478_RS20220;gbkey=Gene;gene_biotype=rRNA;locus_tag=LI478_RS20220 NZ_CP085478.1 cmsearch rRNA 4162225 4165126 . - . ID=rna-LI478_RS20220;Parent=gene-LI478_RS20220;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LI478_RS20220;product=23S ribosomal RNA NZ_CP085478.1 cmsearch exon 4162225 4165126 . - . ID=exon-LI478_RS20220-1;Parent=rna-LI478_RS20220;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LI478_RS20220;product=23S ribosomal RNA NZ_CP085478.1 RefSeq gene 4165304 4165379 . - . ID=gene-LI478_RS20225;Name=LI478_RS20225;gbkey=Gene;gene_biotype=tRNA;locus_tag=LI478_RS20225 NZ_CP085478.1 tRNAscan-SE tRNA 4165304 4165379 . - . ID=rna-LI478_RS20225;Parent=gene-LI478_RS20225;anticodon=(pos:complement(4165344..4165346));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS20225;product=tRNA-Ala NZ_CP085478.1 tRNAscan-SE exon 4165304 4165379 . - . ID=exon-LI478_RS20225-1;Parent=rna-LI478_RS20225;anticodon=(pos:complement(4165344..4165346));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS20225;product=tRNA-Ala NZ_CP085478.1 RefSeq gene 4165485 4165561 . - . ID=gene-LI478_RS20230;Name=LI478_RS20230;gbkey=Gene;gene_biotype=tRNA;locus_tag=LI478_RS20230 NZ_CP085478.1 tRNAscan-SE tRNA 4165485 4165561 . - . ID=rna-LI478_RS20230;Parent=gene-LI478_RS20230;anticodon=(pos:complement(4165525..4165527));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS20230;product=tRNA-Ile NZ_CP085478.1 tRNAscan-SE exon 4165485 4165561 . - . ID=exon-LI478_RS20230-1;Parent=rna-LI478_RS20230;anticodon=(pos:complement(4165525..4165527));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS20230;product=tRNA-Ile NZ_CP085478.1 RefSeq gene 4165633 4167172 . - . ID=gene-LI478_RS20235;Name=LI478_RS20235;gbkey=Gene;gene_biotype=rRNA;locus_tag=LI478_RS20235 NZ_CP085478.1 cmsearch rRNA 4165633 4167172 . - . ID=rna-LI478_RS20235;Parent=gene-LI478_RS20235;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LI478_RS20235;product=16S ribosomal RNA NZ_CP085478.1 cmsearch exon 4165633 4167172 . - . ID=exon-LI478_RS20235-1;Parent=rna-LI478_RS20235;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LI478_RS20235;product=16S ribosomal RNA NZ_CP085478.1 RefSeq gene 4167542 4168108 . - . ID=gene-LI478_RS20240;Name=gmhB;gbkey=Gene;gene=gmhB;gene_biotype=protein_coding;locus_tag=LI478_RS20240 NZ_CP085478.1 Protein Homology CDS 4167542 4168108 . - 0 ID=cds-WP_002889452.1;Parent=gene-LI478_RS20240;Dbxref=Genbank:WP_002889452.1;Name=WP_002889452.1;Ontology_term=GO:0005975,GO:0016791;gbkey=CDS;gene=gmhB;go_function=phosphatase activity|0016791||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225247.1;locus_tag=LI478_RS20240;product=D-glycero-beta-D-manno-heptose 1%2C7-bisphosphate 7-phosphatase;protein_id=WP_002889452.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4168297 4169328 . + . ID=gene-LI478_RS20245;Name=metN;gbkey=Gene;gene=metN;gene_biotype=protein_coding;locus_tag=LI478_RS20245 NZ_CP085478.1 Protein Homology CDS 4168297 4169328 . + 0 ID=cds-WP_002889450.1;Parent=gene-LI478_RS20245;Dbxref=Genbank:WP_002889450.1;Name=WP_002889450.1;Ontology_term=GO:0048473,GO:0005524,GO:0033232,GO:0009898,GO:0055052;gbkey=CDS;gene=metN;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ABC-type D-methionine transporter activity|0033232||IEA;go_process=D-methionine transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014168731.1;locus_tag=LI478_RS20245;product=methionine ABC transporter ATP-binding protein MetN;protein_id=WP_002889450.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4169321 4169974 . + . ID=gene-LI478_RS20250;Name=LI478_RS20250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS20250 NZ_CP085478.1 Protein Homology CDS 4169321 4169974 . + 0 ID=cds-WP_002889448.1;Parent=gene-LI478_RS20250;Dbxref=Genbank:WP_002889448.1;Name=WP_002889448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132073.1;locus_tag=LI478_RS20250;product=methionine ABC transporter permease MetI;protein_id=WP_002889448.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4170018 4170833 . + . ID=gene-LI478_RS20255;Name=metQ;gbkey=Gene;gene=metQ;gene_biotype=protein_coding;locus_tag=LI478_RS20255 NZ_CP085478.1 Protein Homology CDS 4170018 4170833 . + 0 ID=cds-WP_002889445.1;Parent=gene-LI478_RS20255;Dbxref=Genbank:WP_002889445.1;Name=WP_002889445.1;gbkey=CDS;gene=metQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016534993.1;locus_tag=LI478_RS20255;product=methionine ABC transporter substrate-binding lipoprotein MetQ;protein_id=WP_002889445.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4170941 4171348 . + . ID=gene-LI478_RS20260;Name=rcsF;gbkey=Gene;gene=rcsF;gene_biotype=protein_coding;locus_tag=LI478_RS20260 NZ_CP085478.1 Protein Homology CDS 4170941 4171348 . + 0 ID=cds-WP_002889443.1;Parent=gene-LI478_RS20260;Dbxref=Genbank:WP_002889443.1;Name=WP_002889443.1;gbkey=CDS;gene=rcsF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459248.1;locus_tag=LI478_RS20260;product=Rcs stress response system protein RcsF;protein_id=WP_002889443.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4171345 4172052 . + . ID=gene-LI478_RS20265;Name=tsaA;gbkey=Gene;gene=tsaA;gene_biotype=protein_coding;locus_tag=LI478_RS20265 NZ_CP085478.1 Protein Homology CDS 4171345 4172052 . + 0 ID=cds-WP_032414548.1;Parent=gene-LI478_RS20265;Dbxref=Genbank:WP_032414548.1;Name=WP_032414548.1;Ontology_term=GO:0006400,GO:0008757,GO:0005737;gbkey=CDS;gene=tsaA;go_component=cytoplasm|0005737||IEA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225242.1;locus_tag=LI478_RS20265;product=tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO;protein_id=WP_032414548.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4172165 4173883 . + . ID=gene-LI478_RS20270;Name=proS;gbkey=Gene;gene=proS;gene_biotype=protein_coding;locus_tag=LI478_RS20270 NZ_CP085478.1 Protein Homology CDS 4172165 4173883 . + 0 ID=cds-WP_004151928.1;Parent=gene-LI478_RS20270;Dbxref=Genbank:WP_004151928.1;Name=WP_004151928.1;Ontology_term=GO:0006433,GO:0004827,GO:0005737;gbkey=CDS;gene=proS;go_component=cytoplasm|0005737||IEA;go_function=proline-tRNA ligase activity|0004827||IEA;go_process=prolyl-tRNA aminoacylation|0006433||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133963.1;locus_tag=LI478_RS20270;product=proline--tRNA ligase;protein_id=WP_004151928.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4173943 4174785 . + . ID=gene-LI478_RS20275;Name=LI478_RS20275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS20275 NZ_CP085478.1 Protein Homology CDS 4173943 4174785 . + 0 ID=cds-WP_023279839.1;Parent=gene-LI478_RS20275;Dbxref=Genbank:WP_023279839.1;Name=WP_023279839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004178659.1;locus_tag=LI478_RS20275;product=YaeF family permuted papain-like enzyme;protein_id=WP_023279839.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4174917 4175615 . - . ID=gene-LI478_RS20280;Name=nlpE;gbkey=Gene;gene=nlpE;gene_biotype=protein_coding;gene_synonym=cutF;locus_tag=LI478_RS20280 NZ_CP085478.1 Protein Homology CDS 4174917 4175615 . - 0 ID=cds-WP_085354199.1;Parent=gene-LI478_RS20280;Dbxref=Genbank:WP_085354199.1;Name=WP_085354199.1;Note=NlpE%2C an outer membrane lipoprotein%2C interacts directly with CpxA%2C the sensor histidine kinase of the Cpx system for response to envelope stress.;gbkey=CDS;gene=nlpE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002889435.1;locus_tag=LI478_RS20280;product=envelope stress response activation lipoprotein NlpE;protein_id=WP_085354199.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4175658 4176071 . - . ID=gene-LI478_RS20285;Name=arfB;gbkey=Gene;gene=arfB;gene_biotype=protein_coding;locus_tag=LI478_RS20285 NZ_CP085478.1 Protein Homology CDS 4175658 4176071 . - 0 ID=cds-WP_002889433.1;Parent=gene-LI478_RS20285;Dbxref=Genbank:WP_002889433.1;Name=WP_002889433.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=arfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225238.1;locus_tag=LI478_RS20285;product=alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB;protein_id=WP_002889433.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4176068 4176613 . - . ID=gene-LI478_RS20290;Name=LI478_RS20290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS20290 NZ_CP085478.1 Protein Homology CDS 4176068 4176613 . - 0 ID=cds-WP_002889431.1;Parent=gene-LI478_RS20290;Dbxref=Genbank:WP_002889431.1;Name=WP_002889431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225237.1;locus_tag=LI478_RS20290;product=YaeQ family protein;protein_id=WP_002889431.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4176810 4177010 . + . ID=gene-LI478_RS20295;Name=LI478_RS20295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS20295 NZ_CP085478.1 Protein Homology CDS 4176810 4177010 . + 0 ID=cds-WP_002889429.1;Parent=gene-LI478_RS20295;Dbxref=Genbank:WP_002889429.1;Name=WP_002889429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133967.1;locus_tag=LI478_RS20295;product=YaeP family protein;protein_id=WP_002889429.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4176997 4177257 . + . ID=gene-LI478_RS20300;Name=rof;gbkey=Gene;gene=rof;gene_biotype=protein_coding;locus_tag=LI478_RS20300 NZ_CP085478.1 Protein Homology CDS 4176997 4177257 . + 0 ID=cds-WP_002889424.1;Parent=gene-LI478_RS20300;Dbxref=Genbank:WP_002889424.1;Name=WP_002889424.1;gbkey=CDS;gene=rof;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225236.1;locus_tag=LI478_RS20300;product=Rho-binding antiterminator;protein_id=WP_002889424.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4177271 4178584 . - . ID=gene-LI478_RS20305;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=LI478_RS20305 NZ_CP085478.1 Protein Homology CDS 4177271 4178584 . - 0 ID=cds-WP_032414545.1;Parent=gene-LI478_RS20305;Dbxref=Genbank:WP_032414545.1;Name=WP_032414545.1;Ontology_term=GO:0008033,GO:0000166,GO:0005524,GO:0016879;gbkey=CDS;gene=tilS;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA,ligase activity%2C forming carbon-nitrogen bonds|0016879||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225235.1;locus_tag=LI478_RS20305;product=tRNA lysidine(34) synthetase TilS;protein_id=WP_032414545.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4178638 4179027 . - . ID=gene-LI478_RS20310;Name=LI478_RS20310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS20310 NZ_CP085478.1 Protein Homology CDS 4178638 4179027 . - 0 ID=cds-WP_002889387.1;Parent=gene-LI478_RS20310;Dbxref=Genbank:WP_002889387.1;Name=WP_002889387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225234.1;locus_tag=LI478_RS20310;product=VOC family protein;protein_id=WP_002889387.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4179074 4181227 . - . ID=gene-LI478_RS20315;Name=LI478_RS20315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS20315 NZ_CP085478.1 Protein Homology CDS 4179074 4181227 . - 0 ID=cds-WP_002889384.1;Parent=gene-LI478_RS20315;Dbxref=Genbank:WP_002889384.1;Name=WP_002889384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004204462.1;locus_tag=LI478_RS20315;product=lysine decarboxylase LdcC;protein_id=WP_002889384.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4181341 4182300 . - . ID=gene-LI478_RS20320;Name=accA;gbkey=Gene;gene=accA;gene_biotype=protein_coding;locus_tag=LI478_RS20320 NZ_CP085478.1 Protein Homology CDS 4181341 4182300 . - 0 ID=cds-WP_004145855.1;Parent=gene-LI478_RS20320;Dbxref=Genbank:WP_004145855.1;Name=WP_004145855.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accA;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132091.1;locus_tag=LI478_RS20320;product=acetyl-CoA carboxylase carboxyl transferase subunit alpha;protein_id=WP_004145855.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4182313 4185795 . - . ID=gene-LI478_RS20325;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=LI478_RS20325 NZ_CP085478.1 Protein Homology CDS 4182313 4185795 . - 0 ID=cds-WP_032438743.1;Parent=gene-LI478_RS20325;Dbxref=Genbank:WP_032438743.1;Name=WP_032438743.1;Ontology_term=GO:0006260,GO:0003676,GO:0008408;gbkey=CDS;gene=dnaE;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225231.1;locus_tag=LI478_RS20325;product=DNA polymerase III subunit alpha;protein_id=WP_032438743.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4185813 4186412 . - . ID=gene-LI478_RS20330;Name=rnhB;gbkey=Gene;gene=rnhB;gene_biotype=protein_coding;locus_tag=LI478_RS20330 NZ_CP085478.1 Protein Homology CDS 4185813 4186412 . - 0 ID=cds-WP_002889376.1;Parent=gene-LI478_RS20330;Dbxref=Genbank:WP_002889376.1;Name=WP_002889376.1;Ontology_term=GO:0003723,GO:0004523;gbkey=CDS;gene=rnhB;go_function=RNA binding|0003723||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225230.1;locus_tag=LI478_RS20330;product=ribonuclease HII;protein_id=WP_002889376.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4186409 4187560 . - . ID=gene-LI478_RS20335;Name=lpxB;gbkey=Gene;gene=lpxB;gene_biotype=protein_coding;locus_tag=LI478_RS20335 NZ_CP085478.1 Protein Homology CDS 4186409 4187560 . - 0 ID=cds-WP_004177355.1;Parent=gene-LI478_RS20335;Dbxref=Genbank:WP_004177355.1;Name=WP_004177355.1;Ontology_term=GO:0009245,GO:0008915;gbkey=CDS;gene=lpxB;go_function=lipid-A-disaccharide synthase activity|0008915||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225229.1;locus_tag=LI478_RS20335;product=lipid-A-disaccharide synthase;protein_id=WP_004177355.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4187560 4188348 . - . ID=gene-LI478_RS20340;Name=lpxA;gbkey=Gene;gene=lpxA;gene_biotype=protein_coding;locus_tag=LI478_RS20340 NZ_CP085478.1 Protein Homology CDS 4187560 4188348 . - 0 ID=cds-WP_004178647.1;Parent=gene-LI478_RS20340;Dbxref=Genbank:WP_004178647.1;Name=WP_004178647.1;Ontology_term=GO:0008610,GO:0008780;gbkey=CDS;gene=lpxA;go_function=acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity|0008780||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132096.1;locus_tag=LI478_RS20340;product=acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase;protein_id=WP_004178647.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4188352 4188807 . - . ID=gene-LI478_RS20345;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;locus_tag=LI478_RS20345 NZ_CP085478.1 Protein Homology CDS 4188352 4188807 . - 0 ID=cds-WP_004145858.1;Parent=gene-LI478_RS20345;Dbxref=Genbank:WP_004145858.1;Name=WP_004145858.1;gbkey=CDS;gene=fabZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000210741.1;locus_tag=LI478_RS20345;product=3-hydroxyacyl-ACP dehydratase FabZ;protein_id=WP_004145858.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4188913 4189938 . - . ID=gene-LI478_RS20350;Name=lpxD;gbkey=Gene;gene=lpxD;gene_biotype=protein_coding;locus_tag=LI478_RS20350 NZ_CP085478.1 Protein Homology CDS 4188913 4189938 . - 0 ID=cds-WP_004147159.1;Parent=gene-LI478_RS20350;Dbxref=Genbank:WP_004147159.1;Name=WP_004147159.1;Ontology_term=GO:0009245,GO:0016410;gbkey=CDS;gene=lpxD;go_function=N-acyltransferase activity|0016410||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132101.1;locus_tag=LI478_RS20350;product=UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase;protein_id=WP_004147159.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4189942 4190427 . - . ID=gene-LI478_RS20355;Name=skp;gbkey=Gene;gene=skp;gene_biotype=protein_coding;gene_synonym=hlpA,ompH;locus_tag=LI478_RS20355 NZ_CP085478.1 Protein Homology CDS 4189942 4190427 . - 0 ID=cds-WP_002889325.1;Parent=gene-LI478_RS20355;Dbxref=Genbank:WP_002889325.1;Name=WP_002889325.1;gbkey=CDS;gene=skp;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225225.1;locus_tag=LI478_RS20355;product=molecular chaperone Skp;protein_id=WP_002889325.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4190549 4192978 . - . ID=gene-LI478_RS20360;Name=bamA;gbkey=Gene;gene=bamA;gene_biotype=protein_coding;locus_tag=LI478_RS20360 NZ_CP085478.1 Protein Homology CDS 4190549 4192978 . - 0 ID=cds-WP_004177357.1;Parent=gene-LI478_RS20360;Dbxref=Genbank:WP_004177357.1;Name=WP_004177357.1;Ontology_term=GO:0009279;gbkey=CDS;gene=bamA;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225224.1;locus_tag=LI478_RS20360;product=outer membrane protein assembly factor BamA;protein_id=WP_004177357.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4193010 4194362 . - . ID=gene-LI478_RS20365;Name=rseP;gbkey=Gene;gene=rseP;gene_biotype=protein_coding;locus_tag=LI478_RS20365 NZ_CP085478.1 Protein Homology CDS 4193010 4194362 . - 0 ID=cds-WP_004177358.1;Parent=gene-LI478_RS20365;Dbxref=Genbank:WP_004177358.1;Name=WP_004177358.1;Ontology_term=GO:0006508,GO:0004222,GO:0005515,GO:0016020;gbkey=CDS;gene=rseP;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225223.1;locus_tag=LI478_RS20365;product=sigma E protease regulator RseP;protein_id=WP_004177358.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4194374 4195231 . - . ID=gene-LI478_RS20370;Name=cdsA;gbkey=Gene;gene=cdsA;gene_biotype=protein_coding;locus_tag=LI478_RS20370 NZ_CP085478.1 Protein Homology CDS 4194374 4195231 . - 0 ID=cds-WP_002889318.1;Parent=gene-LI478_RS20370;Dbxref=Genbank:WP_002889318.1;Name=WP_002889318.1;Ontology_term=GO:0016772;gbkey=CDS;gene=cdsA;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225222.1;locus_tag=LI478_RS20370;product=phosphatidate cytidylyltransferase;protein_id=WP_002889318.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4195244 4196002 . - . ID=gene-LI478_RS20375;Name=ispU;gbkey=Gene;gene=ispU;gene_biotype=protein_coding;gene_synonym=uppS;locus_tag=LI478_RS20375 NZ_CP085478.1 Protein Homology CDS 4195244 4196002 . - 0 ID=cds-WP_002889316.1;Parent=gene-LI478_RS20375;Dbxref=Genbank:WP_002889316.1;Name=WP_002889316.1;Ontology_term=GO:0043164,GO:0002094,GO:0008834;gbkey=CDS;gene=ispU;go_function=polyprenyltransferase activity|0002094||IEA,di-trans%2Cpoly-cis-decaprenylcistransferase activity|0008834||IEA;go_process=Gram-negative-bacterium-type cell wall biogenesis|0043164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002889316.1;locus_tag=LI478_RS20375;product=(2E%2C6E)-farnesyl-diphosphate-specific ditrans%2Cpolycis-undecaprenyl-diphosphate synthase;protein_id=WP_002889316.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4196240 4197442 . - . ID=gene-LI478_RS20380;Name=ispC;gbkey=Gene;gene=ispC;gene_biotype=protein_coding;locus_tag=LI478_RS20380 NZ_CP085478.1 Protein Homology CDS 4196240 4197442 . - 0 ID=cds-WP_002889310.1;Parent=gene-LI478_RS20380;Dbxref=Genbank:WP_002889310.1;Name=WP_002889310.1;Ontology_term=GO:0008299,GO:0005515,GO:0030604,GO:0046872,GO:0070402;gbkey=CDS;gene=ispC;go_function=protein binding|0005515||IEA,1-deoxy-D-xylulose-5-phosphate reductoisomerase activity|0030604||IEA,metal ion binding|0046872||IEA,NADPH binding|0070402||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225220.1;locus_tag=LI478_RS20380;product=1-deoxy-D-xylulose-5-phosphate reductoisomerase;protein_id=WP_002889310.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4197671 4198228 . - . ID=gene-LI478_RS20385;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=LI478_RS20385 NZ_CP085478.1 Protein Homology CDS 4197671 4198228 . - 0 ID=cds-WP_002889308.1;Parent=gene-LI478_RS20385;Dbxref=Genbank:WP_002889308.1;Name=WP_002889308.1;Ontology_term=GO:0006412,GO:0008135,GO:0005737;gbkey=CDS;gene=frr;go_component=cytoplasm|0005737||IEA;go_function=translation factor activity%2C RNA binding|0008135||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000622421.1;locus_tag=LI478_RS20385;product=ribosome recycling factor;protein_id=WP_002889308.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4198379 4199104 . - . ID=gene-LI478_RS20390;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;locus_tag=LI478_RS20390 NZ_CP085478.1 Protein Homology CDS 4198379 4199104 . - 0 ID=cds-WP_002889306.1;Parent=gene-LI478_RS20390;Dbxref=Genbank:WP_002889306.1;Name=WP_002889306.1;Ontology_term=GO:0015949,GO:0033862;gbkey=CDS;gene=pyrH;go_function=UMP kinase activity|0033862||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000224576.1;locus_tag=LI478_RS20390;product=UMP kinase;protein_id=WP_002889306.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4199255 4200106 . - . ID=gene-LI478_RS20395;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=LI478_RS20395 NZ_CP085478.1 Protein Homology CDS 4199255 4200106 . - 0 ID=cds-WP_004151930.1;Parent=gene-LI478_RS20395;Dbxref=Genbank:WP_004151930.1;Name=WP_004151930.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tsf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132116.1;locus_tag=LI478_RS20395;product=translation elongation factor Ts;protein_id=WP_004151930.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4200226 4200951 . - . ID=gene-LI478_RS20400;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=LI478_RS20400 NZ_CP085478.1 Protein Homology CDS 4200226 4200951 . - 0 ID=cds-WP_002889299.1;Parent=gene-LI478_RS20400;Dbxref=Genbank:WP_002889299.1;Name=WP_002889299.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsB;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132117.1;locus_tag=LI478_RS20400;product=30S ribosomal protein S2;protein_id=WP_002889299.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4201274 4202068 . + . ID=gene-LI478_RS20405;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=LI478_RS20405 NZ_CP085478.1 Protein Homology CDS 4201274 4202068 . + 0 ID=cds-WP_011977676.1;Parent=gene-LI478_RS20405;Dbxref=Genbank:WP_011977676.1;Name=WP_011977676.1;Ontology_term=GO:0036211;gbkey=CDS;gene=map;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225215.1;locus_tag=LI478_RS20405;product=type I methionyl aminopeptidase;protein_id=WP_011977676.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4202126 4204789 . + . ID=gene-LI478_RS20410;Name=glnD;gbkey=Gene;gene=glnD;gene_biotype=protein_coding;locus_tag=LI478_RS20410 NZ_CP085478.1 Protein Homology CDS 4202126 4204789 . + 0 ID=cds-WP_004151931.1;Parent=gene-LI478_RS20410;Dbxref=Genbank:WP_004151931.1;Name=WP_004151931.1;Ontology_term=GO:0006807,GO:0016779;gbkey=CDS;gene=glnD;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017144947.1;locus_tag=LI478_RS20410;product=bifunctional uridylyltransferase/uridylyl-removing protein GlnD;protein_id=WP_004151931.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4204820 4205644 . + . ID=gene-LI478_RS20415;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=LI478_RS20415 NZ_CP085478.1 Protein Homology CDS 4204820 4205644 . + 0 ID=cds-WP_002889295.1;Parent=gene-LI478_RS20415;Dbxref=Genbank:WP_002889295.1;Name=WP_002889295.1;Ontology_term=GO:0009089,GO:0008666;gbkey=CDS;gene=dapD;go_function=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase activity|0008666||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132123.1;locus_tag=LI478_RS20415;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase;protein_id=WP_002889295.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4205752 4206138 . + . ID=gene-LI478_RS20420;Name=LI478_RS20420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS20420 NZ_CP085478.1 Protein Homology CDS 4205752 4206138 . + 0 ID=cds-WP_002889292.1;Parent=gene-LI478_RS20420;Dbxref=Genbank:WP_002889292.1;Name=WP_002889292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000272186.1;locus_tag=LI478_RS20420;product=DUF3461 family protein;protein_id=WP_002889292.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4206257 4207414 . - . ID=gene-LI478_RS20425;Name=cdaR;gbkey=Gene;gene=cdaR;gene_biotype=protein_coding;locus_tag=LI478_RS20425 NZ_CP085478.1 Protein Homology CDS 4206257 4207414 . - 0 ID=cds-WP_002889289.1;Parent=gene-LI478_RS20425;Dbxref=Genbank:WP_002889289.1;Name=WP_002889289.1;gbkey=CDS;gene=cdaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459215.1;locus_tag=LI478_RS20425;product=DNA-binding transcriptional regulator CdaR;protein_id=WP_002889289.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4207581 4209014 . - . ID=gene-LI478_RS20430;Name=degP;gbkey=Gene;gene=degP;gene_biotype=protein_coding;locus_tag=LI478_RS20430 NZ_CP085478.1 Protein Homology CDS 4207581 4209014 . - 0 ID=cds-WP_004145870.1;Parent=gene-LI478_RS20430;Dbxref=Genbank:WP_004145870.1;Name=WP_004145870.1;gbkey=CDS;gene=degP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459214.1;locus_tag=LI478_RS20430;product=serine endoprotease DegP;protein_id=WP_004145870.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4209149 4210663 . - . ID=gene-LI478_RS20435;Name=dgt;gbkey=Gene;gene=dgt;gene_biotype=protein_coding;locus_tag=LI478_RS20435 NZ_CP085478.1 Protein Homology CDS 4209149 4210663 . - 0 ID=cds-WP_032414543.1;Parent=gene-LI478_RS20435;Dbxref=Genbank:WP_032414543.1;Name=WP_032414543.1;Ontology_term=GO:0006203,GO:0000287,GO:0008832;gbkey=CDS;gene=dgt;go_function=magnesium ion binding|0000287||IEA,dGTPase activity|0008832||IEA;go_process=dGTP catabolic process|0006203||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225209.1;locus_tag=LI478_RS20435;product=dGTPase;protein_id=WP_032414543.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4210747 4211445 . + . ID=gene-LI478_RS20440;Name=mtnN;gbkey=Gene;gene=mtnN;gene_biotype=protein_coding;locus_tag=LI478_RS20440 NZ_CP085478.1 Protein Homology CDS 4210747 4211445 . + 0 ID=cds-WP_002889282.1;Parent=gene-LI478_RS20440;Dbxref=Genbank:WP_002889282.1;Name=WP_002889282.1;Ontology_term=GO:0019509,GO:0008782,GO:0008930;gbkey=CDS;gene=mtnN;go_function=adenosylhomocysteine nucleosidase activity|0008782||IEA,methylthioadenosine nucleosidase activity|0008930||IEA;go_process=L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225208.1;locus_tag=LI478_RS20440;product=5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase;protein_id=WP_002889282.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4211438 4212238 . + . ID=gene-LI478_RS20445;Name=btuF;gbkey=Gene;gene=btuF;gene_biotype=protein_coding;locus_tag=LI478_RS20445 NZ_CP085478.1 Protein Homology CDS 4211438 4212238 . + 0 ID=cds-WP_002889279.1;Parent=gene-LI478_RS20445;Dbxref=Genbank:WP_002889279.1;Name=WP_002889279.1;Ontology_term=GO:0005524;gbkey=CDS;gene=btuF;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225207.1;locus_tag=LI478_RS20445;product=vitamin B12 ABC transporter substrate-binding protein BtuF;protein_id=WP_002889279.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4212275 4212898 . + . ID=gene-LI478_RS20450;Name=LI478_RS20450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS20450 NZ_CP085478.1 Protein Homology CDS 4212275 4212898 . + 0 ID=cds-WP_002889277.1;Parent=gene-LI478_RS20450;Dbxref=Genbank:WP_002889277.1;Name=WP_002889277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225206.1;locus_tag=LI478_RS20450;product=TRIC cation channel family protein;protein_id=WP_002889277.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4212970 4213314 . - . ID=gene-LI478_RS20455;Name=erpA;gbkey=Gene;gene=erpA;gene_biotype=protein_coding;locus_tag=LI478_RS20455 NZ_CP085478.1 Protein Homology CDS 4212970 4213314 . - 0 ID=cds-WP_002889275.1;Parent=gene-LI478_RS20455;Dbxref=Genbank:WP_002889275.1;Name=WP_002889275.1;Ontology_term=GO:0016226,GO:0051536;gbkey=CDS;gene=erpA;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295564.1;locus_tag=LI478_RS20455;product=iron-sulfur cluster insertion protein ErpA;protein_id=WP_002889275.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4213396 4214814 . - . ID=gene-LI478_RS20460;Name=clcA;gbkey=Gene;gene=clcA;gene_biotype=protein_coding;locus_tag=LI478_RS20460 NZ_CP085478.1 Protein Homology CDS 4213396 4214814 . - 0 ID=cds-WP_004191940.1;Parent=gene-LI478_RS20460;Dbxref=Genbank:WP_004191940.1;Name=WP_004191940.1;Ontology_term=GO:0006821,GO:0055085,GO:0005247,GO:0005886;gbkey=CDS;gene=clcA;go_component=plasma membrane|0005886||IEA;go_function=voltage-gated chloride channel activity|0005247||IEA;go_process=chloride transport|0006821||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459208.1;locus_tag=LI478_RS20460;product=H(+)/Cl(-) exchange transporter ClcA;protein_id=WP_004191940.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4214995 4216275 . + . ID=gene-LI478_RS20465;Name=hemL;gbkey=Gene;gene=hemL;gene_biotype=protein_coding;locus_tag=LI478_RS20465 NZ_CP085478.1 Protein Homology CDS 4214995 4216275 . + 0 ID=cds-WP_002889272.1;Parent=gene-LI478_RS20465;Dbxref=Genbank:WP_002889272.1;Name=WP_002889272.1;Ontology_term=GO:0006779,GO:0042286,GO:0005737;gbkey=CDS;gene=hemL;go_component=cytoplasm|0005737||IEA;go_function=glutamate-1-semialdehyde 2%2C1-aminomutase activity|0042286||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233394.1;locus_tag=LI478_RS20465;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=WP_002889272.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4216412 4218385 . - . ID=gene-LI478_RS20470;Name=fhuB;gbkey=Gene;gene=fhuB;gene_biotype=protein_coding;locus_tag=LI478_RS20470 NZ_CP085478.1 Protein Homology CDS 4216412 4218385 . - 0 ID=cds-WP_117065279.1;Parent=gene-LI478_RS20470;Dbxref=Genbank:WP_117065279.1;Name=WP_117065279.1;Ontology_term=GO:0022857;gbkey=CDS;gene=fhuB;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225202.1;locus_tag=LI478_RS20470;product=Fe(3+)-hydroxamate ABC transporter permease FhuB;protein_id=WP_117065279.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4218382 4219272 . - . ID=gene-LI478_RS20475;Name=fhuD;gbkey=Gene;gene=fhuD;gene_biotype=protein_coding;locus_tag=LI478_RS20475 NZ_CP085478.1 Protein Homology CDS 4218382 4219272 . - 0 ID=cds-WP_004147133.1;Parent=gene-LI478_RS20475;Dbxref=Genbank:WP_004147133.1;Name=WP_004147133.1;gbkey=CDS;gene=fhuD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225201.1;locus_tag=LI478_RS20475;product=Fe(3+)-hydroxamate ABC transporter substrate-binding protein FhuD;protein_id=WP_004147133.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4219272 4220069 . - . ID=gene-LI478_RS20480;Name=fhuC;gbkey=Gene;gene=fhuC;gene_biotype=protein_coding;locus_tag=LI478_RS20480 NZ_CP085478.1 Protein Homology CDS 4219272 4220069 . - 0 ID=cds-WP_004145876.1;Parent=gene-LI478_RS20480;Dbxref=Genbank:WP_004145876.1;Name=WP_004145876.1;Ontology_term=GO:0005524;gbkey=CDS;gene=fhuC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225200.1;locus_tag=LI478_RS20480;product=Fe3+-hydroxamate ABC transporter ATP-binding protein FhuC;protein_id=WP_004145876.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4220115 4222322 . - . ID=gene-LI478_RS20485;Name=fhuA;gbkey=Gene;gene=fhuA;gene_biotype=protein_coding;locus_tag=LI478_RS20485 NZ_CP085478.1 Protein Homology CDS 4220115 4222322 . - 0 ID=cds-WP_004178624.1;Parent=gene-LI478_RS20485;Dbxref=Genbank:WP_004178624.1;Name=WP_004178624.1;Ontology_term=GO:0015891,GO:0015344,GO:0038023,GO:0009279;gbkey=CDS;gene=fhuA;go_component=cell outer membrane|0009279||IEA;go_function=siderophore uptake transmembrane transporter activity|0015344||IEA,signaling receptor activity|0038023||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004204430.1;locus_tag=LI478_RS20485;product=ferrichrome porin FhuA;protein_id=WP_004178624.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4222557 4225109 . - . ID=gene-LI478_RS20490;Name=mrcB;gbkey=Gene;gene=mrcB;gene_biotype=protein_coding;locus_tag=LI478_RS20490 NZ_CP085478.1 Protein Homology CDS 4222557 4225109 . - 0 ID=cds-WP_004213431.1;Parent=gene-LI478_RS20490;Dbxref=Genbank:WP_004213431.1;Name=WP_004213431.1;Ontology_term=GO:0009252,GO:0046677,GO:0008658,GO:0008955,GO:0009274;gbkey=CDS;gene=mrcB;go_component=peptidoglycan-based cell wall|0009274||IEA;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225197.1;locus_tag=LI478_RS20490;product=bifunctional glycosyl transferase/transpeptidase;protein_id=WP_004213431.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4225500 4225634 . + . ID=gene-LI478_RS20495;Name=LI478_RS20495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS20495 NZ_CP085478.1 Protein Homology CDS 4225500 4225634 . + 0 ID=cds-WP_004147125.1;Parent=gene-LI478_RS20495;Dbxref=Genbank:WP_004147125.1;Name=WP_004147125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225195.1;locus_tag=LI478_RS20495;product=hypothetical protein;protein_id=WP_004147125.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4225697 4226071 . + . ID=gene-LI478_RS20500;Name=gspS;gbkey=Gene;gene=gspS;gene_biotype=protein_coding;locus_tag=LI478_RS20500 NZ_CP085478.1 Protein Homology CDS 4225697 4226071 . + 0 ID=cds-WP_004194926.1;Parent=gene-LI478_RS20500;Dbxref=Genbank:WP_004194926.1;Name=WP_004194926.1;gbkey=CDS;gene=gspS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016160317.1;locus_tag=LI478_RS20500;product=type II secretion system pilot lipoprotein GspS;protein_id=WP_004194926.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4226111 4226668 . - . ID=gene-LI478_RS20505;Name=gspB;gbkey=Gene;gene=gspB;gene_biotype=protein_coding;locus_tag=LI478_RS20505 NZ_CP085478.1 Protein Homology CDS 4226111 4226668 . - 0 ID=cds-WP_021467526.1;Parent=gene-LI478_RS20505;Dbxref=Genbank:WP_021467526.1;Name=WP_021467526.1;gbkey=CDS;gene=gspB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225193.1;locus_tag=LI478_RS20505;product=type II secretion system assembly factor GspB;protein_id=WP_021467526.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4226925 4230233 . - . ID=gene-LI478_RS20510;Name=pulA;gbkey=Gene;gene=pulA;gene_biotype=protein_coding;locus_tag=LI478_RS20510 NZ_CP085478.1 Protein Homology CDS 4226925 4230233 . - 0 ID=cds-WP_064153120.1;Parent=gene-LI478_RS20510;Dbxref=Genbank:WP_064153120.1;Name=WP_064153120.1;Ontology_term=GO:0005983,GO:0051678,GO:0051060;gbkey=CDS;gene=pulA;go_function=pullulanase activity|0051060||IEA;go_process=starch catabolic process|0005983||IEA,pullulan catabolic process|0051678||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016160315.1;locus_tag=LI478_RS20510;product=pullulanase-type alpha-1%2C6-glucosidase;protein_id=WP_064153120.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4230418 4230555 . + . ID=gene-LI478_RS20515;Name=LI478_RS20515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS20515 NZ_CP085478.1 Protein Homology CDS 4230418 4230555 . + 0 ID=cds-WP_004219434.1;Parent=gene-LI478_RS20515;Dbxref=Genbank:WP_004219434.1;Name=WP_004219434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225189.1;locus_tag=LI478_RS20515;product=hypothetical protein;protein_id=WP_004219434.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4230540 4231382 . + . ID=gene-LI478_RS20520;Name=gspC;gbkey=Gene;gene=gspC;gene_biotype=protein_coding;locus_tag=LI478_RS20520 NZ_CP085478.1 Protein Homology CDS 4230540 4231382 . + 0 ID=cds-WP_019705882.1;Parent=gene-LI478_RS20520;Dbxref=Genbank:WP_019705882.1;Name=WP_019705882.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspC;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225188.1;locus_tag=LI478_RS20520;product=type II secretion system protein GspC;protein_id=WP_019705882.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4231392 4233365 . + . ID=gene-LI478_RS20525;Name=pulD;gbkey=Gene;gene=pulD;gene_biotype=protein_coding;gene_synonym=gspD;locus_tag=LI478_RS20525 NZ_CP085478.1 Protein Homology CDS 4231392 4233365 . + 0 ID=cds-WP_004151935.1;Parent=gene-LI478_RS20525;Dbxref=Genbank:WP_004151935.1;Name=WP_004151935.1;gbkey=CDS;gene=pulD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225187.1;locus_tag=LI478_RS20525;product=GspD family T2SS secretin variant PulD;protein_id=WP_004151935.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4233362 4234855 . + . ID=gene-LI478_RS20530;Name=gspE;gbkey=Gene;gene=gspE;gene_biotype=protein_coding;locus_tag=LI478_RS20530 NZ_CP085478.1 Protein Homology CDS 4233362 4234855 . + 0 ID=cds-WP_004147121.1;Parent=gene-LI478_RS20530;Dbxref=Genbank:WP_004147121.1;Name=WP_004147121.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspE;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225186.1;locus_tag=LI478_RS20530;product=type II secretion system ATPase GspE;protein_id=WP_004147121.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4234857 4236071 . + . ID=gene-LI478_RS20535;Name=gspF;gbkey=Gene;gene=gspF;gene_biotype=protein_coding;locus_tag=LI478_RS20535 NZ_CP085478.1 Protein Homology CDS 4234857 4236071 . + 0 ID=cds-WP_004147120.1;Parent=gene-LI478_RS20535;Dbxref=Genbank:WP_004147120.1;Name=WP_004147120.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspF;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225185.1;locus_tag=LI478_RS20535;product=type II secretion system inner membrane protein GspF;protein_id=WP_004147120.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4236092 4236514 . + . ID=gene-LI478_RS20540;Name=gspG;gbkey=Gene;gene=gspG;gene_biotype=protein_coding;locus_tag=LI478_RS20540 NZ_CP085478.1 Protein Homology CDS 4236092 4236514 . + 0 ID=cds-WP_002889054.1;Parent=gene-LI478_RS20540;Dbxref=Genbank:WP_002889054.1;Name=WP_002889054.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspG;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225184.1;locus_tag=LI478_RS20540;product=type II secretion system major pseudopilin GspG;protein_id=WP_002889054.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4236514 4237023 . + . ID=gene-LI478_RS20545;Name=gspH;gbkey=Gene;gene=gspH;gene_biotype=protein_coding;locus_tag=LI478_RS20545 NZ_CP085478.1 Protein Homology CDS 4236514 4237023 . + 0 ID=cds-WP_064153121.1;Parent=gene-LI478_RS20545;Dbxref=Genbank:WP_064153121.1;Name=WP_064153121.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspH;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225183.1;locus_tag=LI478_RS20545;product=type II secretion system minor pseudopilin GspH;protein_id=WP_064153121.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4237026 4237391 . + . ID=gene-LI478_RS20550;Name=gspI;gbkey=Gene;gene=gspI;gene_biotype=protein_coding;locus_tag=LI478_RS20550 NZ_CP085478.1 Protein Homology CDS 4237026 4237391 . + 0 ID=cds-WP_002889025.1;Parent=gene-LI478_RS20550;Dbxref=Genbank:WP_002889025.1;Name=WP_002889025.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspI;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225182.1;locus_tag=LI478_RS20550;product=type II secretion system minor pseudopilin GspI;protein_id=WP_002889025.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4237388 4237984 . + . ID=gene-LI478_RS20555;Name=gspJ;gbkey=Gene;gene=gspJ;gene_biotype=protein_coding;locus_tag=LI478_RS20555 NZ_CP085478.1 Protein Homology CDS 4237388 4237984 . + 0 ID=cds-WP_004145893.1;Parent=gene-LI478_RS20555;Dbxref=Genbank:WP_004145893.1;Name=WP_004145893.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspJ;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225181.1;locus_tag=LI478_RS20555;product=type II secretion system minor pseudopilin GspJ;protein_id=WP_004145893.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4237981 4238967 . + . ID=gene-LI478_RS20560;Name=gspK;gbkey=Gene;gene=gspK;gene_biotype=protein_coding;locus_tag=LI478_RS20560 NZ_CP085478.1 Protein Homology CDS 4237981 4238967 . + 0 ID=cds-WP_102007297.1;Parent=gene-LI478_RS20560;Dbxref=Genbank:WP_102007297.1;Name=WP_102007297.1;Ontology_term=GO:0009306,GO:0016020;gbkey=CDS;gene=gspK;go_component=membrane|0016020||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004894165.1;locus_tag=LI478_RS20560;product=type II secretion system minor pseudopilin GspK;protein_id=WP_102007297.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4238954 4240147 . + . ID=gene-LI478_RS20565;Name=gspL;gbkey=Gene;gene=gspL;gene_biotype=protein_coding;locus_tag=LI478_RS20565 NZ_CP085478.1 Protein Homology CDS 4238954 4240147 . + 0 ID=cds-WP_004191957.1;Parent=gene-LI478_RS20565;Dbxref=Genbank:WP_004191957.1;Name=WP_004191957.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspL;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225179.1;locus_tag=LI478_RS20565;product=type II secretion system protein GspL;protein_id=WP_004191957.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4240140 4240625 . + . ID=gene-LI478_RS20570;Name=LI478_RS20570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS20570 NZ_CP085478.1 Protein Homology CDS 4240140 4240625 . + 0 ID=cds-WP_004151943.1;Parent=gene-LI478_RS20570;Dbxref=Genbank:WP_004151943.1;Name=WP_004151943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225178.1;locus_tag=LI478_RS20570;product=type II secretion system protein M;protein_id=WP_004151943.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4240615 4241361 . + . ID=gene-LI478_RS20575;Name=LI478_RS20575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS20575 NZ_CP085478.1 Protein Homology CDS 4240615 4241361 . + 0 ID=cds-WP_004145897.1;Parent=gene-LI478_RS20575;Dbxref=Genbank:WP_004145897.1;Name=WP_004145897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225177.1;locus_tag=LI478_RS20575;product=type II secretion system protein N;protein_id=WP_004145897.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4241358 4242158 . + . ID=gene-LI478_RS20580;Name=LI478_RS20580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS20580 NZ_CP085478.1 Protein Homology CDS 4241358 4242158 . + 0 ID=cds-WP_004213441.1;Parent=gene-LI478_RS20580;Dbxref=Genbank:WP_004213441.1;Name=WP_004213441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225176.1;locus_tag=LI478_RS20580;product=A24 family peptidase;protein_id=WP_004213441.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4242206 4244635 . - . ID=gene-LI478_RS20585;Name=hrpB;gbkey=Gene;gene=hrpB;gene_biotype=protein_coding;locus_tag=LI478_RS20585 NZ_CP085478.1 Protein Homology CDS 4242206 4244635 . - 0 ID=cds-WP_227394153.1;Parent=gene-LI478_RS20585;Dbxref=Genbank:WP_227394153.1;Name=WP_227394153.1;Ontology_term=GO:0004386,GO:0005524;gbkey=CDS;gene=hrpB;go_function=helicase activity|0004386||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225175.1;locus_tag=LI478_RS20585;product=ATP-dependent helicase HrpB;protein_id=WP_227394153.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4244708 4245244 . + . ID=gene-LI478_RS20590;Name=thpR;gbkey=Gene;gene=thpR;gene_biotype=protein_coding;locus_tag=LI478_RS20590 NZ_CP085478.1 Protein Homology CDS 4244708 4245244 . + 0 ID=cds-WP_004145901.1;Parent=gene-LI478_RS20590;Dbxref=Genbank:WP_004145901.1;Name=WP_004145901.1;Ontology_term=GO:0004113,GO:0008664;gbkey=CDS;gene=thpR;go_function=2'%2C3'-cyclic-nucleotide 3'-phosphodiesterase activity|0004113||IEA,2'-5'-RNA ligase activity|0008664||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225174.1;locus_tag=LI478_RS20590;product=RNA 2'%2C3'-cyclic phosphodiesterase;protein_id=WP_004145901.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4245244 4245960 . + . ID=gene-LI478_RS20595;Name=sfsA;gbkey=Gene;gene=sfsA;gene_biotype=protein_coding;locus_tag=LI478_RS20595 NZ_CP085478.1 Protein Homology CDS 4245244 4245960 . + 0 ID=cds-WP_002888848.1;Parent=gene-LI478_RS20595;Dbxref=Genbank:WP_002888848.1;Name=WP_002888848.1;Ontology_term=GO:0000023,GO:0003677;gbkey=CDS;gene=sfsA;go_function=DNA binding|0003677||IEA;go_process=maltose metabolic process|0000023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225173.1;locus_tag=LI478_RS20595;product=DNA/RNA nuclease SfsA;protein_id=WP_002888848.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4246123 4246578 . + . ID=gene-LI478_RS20600;Name=dksA;gbkey=Gene;gene=dksA;gene_biotype=protein_coding;locus_tag=LI478_RS20600 NZ_CP085478.1 Protein Homology CDS 4246123 4246578 . + 0 ID=cds-WP_002888845.1;Parent=gene-LI478_RS20600;Dbxref=Genbank:WP_002888845.1;Name=WP_002888845.1;gbkey=CDS;gene=dksA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209354.1;locus_tag=LI478_RS20600;product=RNA polymerase-binding protein DksA;protein_id=WP_002888845.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4246638 4247519 . + . ID=gene-LI478_RS20605;Name=gluQRS;gbkey=Gene;gene=gluQRS;gene_biotype=protein_coding;locus_tag=LI478_RS20605 NZ_CP085478.1 Protein Homology CDS 4246638 4247519 . + 0 ID=cds-WP_004177391.1;Parent=gene-LI478_RS20605;Dbxref=Genbank:WP_004177391.1;Name=WP_004177391.1;Ontology_term=GO:0006400,GO:0043039,GO:0000166,GO:0004812,GO:0005524;gbkey=CDS;gene=gluQRS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA;go_process=tRNA modification|0006400||IEA,tRNA aminoacylation|0043039||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225171.1;locus_tag=LI478_RS20605;product=tRNA glutamyl-Q(34) synthetase GluQRS;protein_id=WP_004177391.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4247582 4248976 . + . ID=gene-LI478_RS20610;Name=pcnB;gbkey=Gene;gene=pcnB;gene_biotype=protein_coding;locus_tag=LI478_RS20610 NZ_CP085478.1 Protein Homology CDS 4247582 4248976 . + 0 ID=cds-WP_071526609.1;Parent=gene-LI478_RS20610;Dbxref=Genbank:WP_071526609.1;Name=WP_071526609.1;Ontology_term=GO:0006378,GO:0003723,GO:0004652;gbkey=CDS;gene=pcnB;go_function=RNA binding|0003723||IEA,polynucleotide adenylyltransferase activity|0004652||IEA;go_process=mRNA polyadenylation|0006378||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414685.4;locus_tag=LI478_RS20610;product=polynucleotide adenylyltransferase PcnB;protein_id=WP_071526609.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4248973 4249452 . + . ID=gene-LI478_RS20615;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=LI478_RS20615 NZ_CP085478.1 Protein Homology CDS 4248973 4249452 . + 0 ID=cds-WP_004145905.1;Parent=gene-LI478_RS20615;Dbxref=Genbank:WP_004145905.1;Name=WP_004145905.1;gbkey=CDS;gene=folK;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225169.1;locus_tag=LI478_RS20615;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=WP_004145905.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4249573 4250364 . + . ID=gene-LI478_RS20620;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=LI478_RS20620 NZ_CP085478.1 Protein Homology CDS 4249573 4250364 . + 0 ID=cds-WP_002888841.1;Parent=gene-LI478_RS20620;Dbxref=Genbank:WP_002888841.1;Name=WP_002888841.1;Ontology_term=GO:0015940,GO:0003864;gbkey=CDS;gene=panB;go_function=3-methyl-2-oxobutanoate hydroxymethyltransferase activity|0003864||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000805487.1;locus_tag=LI478_RS20620;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=WP_002888841.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4250376 4251230 . + . ID=gene-LI478_RS20625;Name=panC;gbkey=Gene;gene=panC;gene_biotype=protein_coding;locus_tag=LI478_RS20625 NZ_CP085478.1 Protein Homology CDS 4250376 4251230 . + 0 ID=cds-WP_002888835.1;Parent=gene-LI478_RS20625;Dbxref=Genbank:WP_002888835.1;Name=WP_002888835.1;Ontology_term=GO:0015940,GO:0004592;gbkey=CDS;gene=panC;go_function=pantoate-beta-alanine ligase activity|0004592||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225167.1;locus_tag=LI478_RS20625;product=pantoate--beta-alanine ligase;protein_id=WP_002888835.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4251323 4251703 . + . ID=gene-LI478_RS20630;Name=panD;gbkey=Gene;gene=panD;gene_biotype=protein_coding;locus_tag=LI478_RS20630 NZ_CP085478.1 Protein Homology CDS 4251323 4251703 . + 0 ID=cds-WP_002888834.1;Parent=gene-LI478_RS20630;Dbxref=Genbank:WP_002888834.1;Name=WP_002888834.1;Ontology_term=GO:0015940,GO:0004068;gbkey=CDS;gene=panD;go_function=aspartate 1-decarboxylase activity|0004068||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124704.1;locus_tag=LI478_RS20630;product=aspartate 1-decarboxylase;protein_id=WP_002888834.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4251739 4252992 . - . ID=gene-LI478_RS20635;Name=LI478_RS20635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS20635 NZ_CP085478.1 Protein Homology CDS 4251739 4252992 . - 0 ID=cds-WP_021314222.1;Parent=gene-LI478_RS20635;Dbxref=Genbank:WP_021314222.1;Name=WP_021314222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225165.1;locus_tag=LI478_RS20635;product=polysaccharide deacetylase family protein;protein_id=WP_021314222.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4253051 4253491 . - . ID=gene-LI478_RS20640;Name=LI478_RS20640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS20640 NZ_CP085478.1 Protein Homology CDS 4253051 4253491 . - 0 ID=cds-WP_004177394.1;Parent=gene-LI478_RS20640;Dbxref=Genbank:WP_004177394.1;Name=WP_004177394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225164.1;locus_tag=LI478_RS20640;product=PTS sugar transporter subunit IIA;protein_id=WP_004177394.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4253614 4254384 . - . ID=gene-LI478_RS20645;Name=LI478_RS20645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS20645 NZ_CP085478.1 Protein Homology CDS 4253614 4254384 . - 0 ID=cds-WP_002888827.1;Parent=gene-LI478_RS20645;Dbxref=Genbank:WP_002888827.1;Name=WP_002888827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001747261.1;locus_tag=LI478_RS20645;product=ABC transporter permease;protein_id=WP_002888827.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4254381 4255307 . - . ID=gene-LI478_RS20650;Name=LI478_RS20650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS20650 NZ_CP085478.1 Protein Homology CDS 4254381 4255307 . - 0 ID=cds-WP_002888823.1;Parent=gene-LI478_RS20650;Dbxref=Genbank:WP_002888823.1;Name=WP_002888823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225162.1;locus_tag=LI478_RS20650;product=ABC transporter ATP-binding protein;protein_id=WP_002888823.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4255492 4256154 . + . ID=gene-LI478_RS20655;Name=can;gbkey=Gene;gene=can;gene_biotype=protein_coding;locus_tag=LI478_RS20655 NZ_CP085478.1 Protein Homology CDS 4255492 4256154 . + 0 ID=cds-WP_002888821.1;Parent=gene-LI478_RS20655;Dbxref=Genbank:WP_002888821.1;Name=WP_002888821.1;Ontology_term=GO:0015976,GO:0004089,GO:0008270;gbkey=CDS;gene=can;go_function=carbonate dehydratase activity|0004089||IEA,zinc ion binding|0008270||IEA;go_process=carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414668.1;locus_tag=LI478_RS20655;product=carbonate dehydratase;protein_id=WP_002888821.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4256214 4256750 . - . ID=gene-LI478_RS20660;Name=hpt;gbkey=Gene;gene=hpt;gene_biotype=protein_coding;locus_tag=LI478_RS20660 NZ_CP085478.1 Protein Homology CDS 4256214 4256750 . - 0 ID=cds-WP_002888819.1;Parent=gene-LI478_RS20660;Dbxref=Genbank:WP_002888819.1;Name=WP_002888819.1;Ontology_term=GO:0006166;gbkey=CDS;gene=hpt;go_process=purine ribonucleoside salvage|0006166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004204384.1;locus_tag=LI478_RS20660;product=hypoxanthine phosphoribosyltransferase;protein_id=WP_002888819.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4256755 4256874 . - . ID=gene-LI478_RS20665;Name=LI478_RS20665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS20665 NZ_CP085478.1 Protein Homology CDS 4256755 4256874 . - 0 ID=cds-WP_012542835.1;Parent=gene-LI478_RS20665;Dbxref=Genbank:WP_012542835.1;Name=WP_012542835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225159.1;locus_tag=LI478_RS20665;product=hypothetical protein;protein_id=WP_012542835.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4256955 4259345 . + . ID=gene-LI478_RS20670;Name=LI478_RS20670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS20670 NZ_CP085478.1 Protein Homology CDS 4256955 4259345 . + 0 ID=cds-WP_064153123.1;Parent=gene-LI478_RS20670;Dbxref=Genbank:WP_064153123.1;Name=WP_064153123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225158.1;locus_tag=LI478_RS20670;product=glucose/quinate/shikimate family membrane-bound PQQ-dependent dehydrogenase;protein_id=WP_064153123.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4259429 4261027 . - . ID=gene-LI478_RS20675;Name=cueO;gbkey=Gene;gene=cueO;gene_biotype=protein_coding;locus_tag=LI478_RS20675 NZ_CP085478.1 Protein Homology CDS 4259429 4261027 . - 0 ID=cds-WP_064153124.1;Parent=gene-LI478_RS20675;Dbxref=Genbank:WP_064153124.1;Name=WP_064153124.1;Ontology_term=GO:0005507,GO:0016491;gbkey=CDS;gene=cueO;go_function=copper ion binding|0005507||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225157.1;locus_tag=LI478_RS20675;product=multicopper oxidase CueO;protein_id=WP_064153124.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4261104 4262072 . + . ID=gene-LI478_RS20680;Name=LI478_RS20680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS20680 NZ_CP085478.1 Protein Homology CDS 4261104 4262072 . + 0 ID=cds-WP_004225014.1-8;Parent=gene-LI478_RS20680;Dbxref=Genbank:WP_004225014.1;Name=WP_004225014.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=LI478_RS20680;product=IS5 family transposase;protein_id=WP_004225014.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4262238 4262585 . + . ID=gene-LI478_RS20685;Name=LI478_RS20685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS20685 NZ_CP085478.1 Protein Homology CDS 4262238 4262585 . + 0 ID=cds-WP_002888808.1;Parent=gene-LI478_RS20685;Dbxref=Genbank:WP_002888808.1;Name=WP_002888808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414664.4;locus_tag=LI478_RS20685;product=YacC family pilotin-like protein;protein_id=WP_002888808.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4262833 4263243 . + . ID=gene-LI478_RS20690;Name=LI478_RS20690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS20690 NZ_CP085478.1 Protein Homology CDS 4262833 4263243 . + 0 ID=cds-WP_004145917.1;Parent=gene-LI478_RS20690;Dbxref=Genbank:WP_004145917.1;Name=WP_004145917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225155.1;locus_tag=LI478_RS20690;product=hypothetical protein;protein_id=WP_004145917.1;transl_table=11 NZ_CP085478.1 RefSeq pseudogene 4263825 4264064 . + . ID=gene-LI478_RS20695;Name=LI478_RS20695;end_range=4264064,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS20695;partial=true;pseudo=true NZ_CP085478.1 Protein Homology CDS 4263825 4264064 . + 0 ID=cds-LI478_RS20695;Parent=gene-LI478_RS20695;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=4264064,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225152.1;locus_tag=LI478_RS20695;partial=true;product=peptidylprolyl isomerase;pseudo=true;transl_table=11 NZ_CP085478.1 RefSeq gene 4264074 4265267 . + . ID=gene-LI478_RS20700;Name=LI478_RS20700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS20700 NZ_CP085478.1 Protein Homology CDS 4264074 4265267 . + 0 ID=cds-WP_087830592.1;Parent=gene-LI478_RS20700;Dbxref=Genbank:WP_087830592.1;Name=WP_087830592.1;Ontology_term=GO:0003755;gbkey=CDS;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225149.1;locus_tag=LI478_RS20700;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_087830592.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4265417 4266277 . + . ID=gene-LI478_RS20705;Name=speE;gbkey=Gene;gene=speE;gene_biotype=protein_coding;locus_tag=LI478_RS20705 NZ_CP085478.1 Protein Homology CDS 4265417 4266277 . + 0 ID=cds-WP_002888741.1;Parent=gene-LI478_RS20705;Dbxref=Genbank:WP_002888741.1;Name=WP_002888741.1;gbkey=CDS;gene=speE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225148.1;locus_tag=LI478_RS20705;product=polyamine aminopropyltransferase;protein_id=WP_002888741.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4266302 4267096 . + . ID=gene-LI478_RS20710;Name=speD;gbkey=Gene;gene=speD;gene_biotype=protein_coding;locus_tag=LI478_RS20710 NZ_CP085478.1 Protein Homology CDS 4266302 4267096 . + 0 ID=cds-WP_002888739.1;Parent=gene-LI478_RS20710;Dbxref=Genbank:WP_002888739.1;Name=WP_002888739.1;Ontology_term=GO:0008295,GO:0004014;gbkey=CDS;gene=speD;go_function=adenosylmethionine decarboxylase activity|0004014||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225147.1;locus_tag=LI478_RS20710;product=adenosylmethionine decarboxylase;protein_id=WP_002888739.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4267169 4267531 . - . ID=gene-LI478_RS20715;Name=yacL;gbkey=Gene;gene=yacL;gene_biotype=protein_coding;locus_tag=LI478_RS20715 NZ_CP085478.1 Protein Homology CDS 4267169 4267531 . - 0 ID=cds-WP_102007266.1;Parent=gene-LI478_RS20715;Dbxref=Genbank:WP_102007266.1;Name=WP_102007266.1;gbkey=CDS;gene=yacL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225146.1;locus_tag=LI478_RS20715;product=protein YacL;protein_id=WP_102007266.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4267718 4270315 . - . ID=gene-LI478_RS20720;Name=acnB;gbkey=Gene;gene=acnB;gene_biotype=protein_coding;locus_tag=LI478_RS20720 NZ_CP085478.1 Protein Homology CDS 4267718 4270315 . - 0 ID=cds-WP_002888735.1;Parent=gene-LI478_RS20720;Dbxref=Genbank:WP_002888735.1;Name=WP_002888735.1;Ontology_term=GO:0006099,GO:0003994;gbkey=CDS;gene=acnB;go_function=aconitate hydratase activity|0003994||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459163.1;locus_tag=LI478_RS20720;product=bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase;protein_id=WP_002888735.1;transl_table=11 NZ_CP085478.1 RefSeq pseudogene 4270747 4272353 . + . ID=gene-LI478_RS20725;Name=LI478_RS20725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS20725;pseudo=true NZ_CP085478.1 Protein Homology CDS 4270747 4272353 . + 0 ID=cds-LI478_RS20725;Parent=gene-LI478_RS20725;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225143.1;locus_tag=LI478_RS20725;product=DUF3300 domain-containing protein;pseudo=true;transl_table=11 NZ_CP085478.1 RefSeq gene 4272365 4273171 . + . ID=gene-LI478_RS20730;Name=LI478_RS20730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS20730 NZ_CP085478.1 Protein Homology CDS 4272365 4273171 . + 0 ID=cds-WP_004177402.1;Parent=gene-LI478_RS20730;Dbxref=Genbank:WP_004177402.1;Name=WP_004177402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225142.1;locus_tag=LI478_RS20730;product=DUF2950 family protein;protein_id=WP_004177402.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4273217 4273501 . - . ID=gene-LI478_RS20735;Name=LI478_RS20735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS20735 NZ_CP085478.1 Protein Homology CDS 4273217 4273501 . - 0 ID=cds-WP_061891838.1;Parent=gene-LI478_RS20735;Dbxref=Genbank:WP_061891838.1;Name=WP_061891838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225141.1;locus_tag=LI478_RS20735;product=hypothetical protein;protein_id=WP_061891838.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4273666 4275090 . - . ID=gene-LI478_RS20740;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=LI478_RS20740 NZ_CP085478.1 Protein Homology CDS 4273666 4275090 . - 0 ID=cds-WP_227394184.1;Parent=gene-LI478_RS20740;Dbxref=Genbank:WP_227394184.1;Name=WP_227394184.1;Ontology_term=GO:0006096,GO:0045454,GO:0051068,GO:0004148;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase activity|0004148||IEA;go_process=glycolytic process|0006096||IEA,cell redox homeostasis|0045454||IEA,dihydrolipoamide metabolic process|0051068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001738005.1;locus_tag=LI478_RS20740;product=dihydrolipoyl dehydrogenase;protein_id=WP_227394184.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4275297 4277195 . - . ID=gene-LI478_RS20745;Name=aceF;gbkey=Gene;gene=aceF;gene_biotype=protein_coding;locus_tag=LI478_RS20745 NZ_CP085478.1 Protein Homology CDS 4275297 4277195 . - 0 ID=cds-WP_023312666.1;Parent=gene-LI478_RS20745;Dbxref=Genbank:WP_023312666.1;Name=WP_023312666.1;Ontology_term=GO:0006096,GO:0004742,GO:0045254;gbkey=CDS;gene=aceF;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=dihydrolipoyllysine-residue acetyltransferase activity|0004742||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225139.1;locus_tag=LI478_RS20745;product=pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase;protein_id=WP_023312666.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4277210 4279873 . - . ID=gene-LI478_RS20750;Name=aceE;gbkey=Gene;gene=aceE;gene_biotype=protein_coding;locus_tag=LI478_RS20750 NZ_CP085478.1 Protein Homology CDS 4277210 4279873 . - 0 ID=cds-WP_002888700.1;Parent=gene-LI478_RS20750;Dbxref=Genbank:WP_002888700.1;Name=WP_002888700.1;Ontology_term=GO:0006086,GO:0004738,GO:0045250;gbkey=CDS;gene=aceE;go_component=cytosolic pyruvate dehydrogenase complex|0045250||IEA;go_function=pyruvate dehydrogenase activity|0004738||IEA;go_process=acetyl-CoA biosynthetic process from pyruvate|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008814576.1;locus_tag=LI478_RS20750;product=pyruvate dehydrogenase (acetyl-transferring)%2C homodimeric type;protein_id=WP_002888700.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4280010 4280789 . - . ID=gene-LI478_RS20755;Name=pdhR;gbkey=Gene;gene=pdhR;gene_biotype=protein_coding;locus_tag=LI478_RS20755 NZ_CP085478.1 Protein Homology CDS 4280010 4280789 . - 0 ID=cds-WP_002888699.1;Parent=gene-LI478_RS20755;Dbxref=Genbank:WP_002888699.1;Name=WP_002888699.1;gbkey=CDS;gene=pdhR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225137.1;locus_tag=LI478_RS20755;product=pyruvate dehydrogenase complex transcriptional repressor PdhR;protein_id=WP_002888699.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4281433 4282803 . + . ID=gene-LI478_RS20760;Name=aroP;gbkey=Gene;gene=aroP;gene_biotype=protein_coding;locus_tag=LI478_RS20760 NZ_CP085478.1 Protein Homology CDS 4281433 4282803 . + 0 ID=cds-WP_004147090.1;Parent=gene-LI478_RS20760;Dbxref=Genbank:WP_004147090.1;Name=WP_004147090.1;Ontology_term=GO:0006865;gbkey=CDS;gene=aroP;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225135.1;locus_tag=LI478_RS20760;product=aromatic amino acid transporter AroP;protein_id=WP_004147090.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4282988 4284394 . + . ID=gene-LI478_RS20765;Name=LI478_RS20765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS20765 NZ_CP085478.1 Protein Homology CDS 4282988 4284394 . + 0 ID=cds-WP_004145929.1;Parent=gene-LI478_RS20765;Dbxref=Genbank:WP_004145929.1;Name=WP_004145929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225134.1;locus_tag=LI478_RS20765;product=MFS transporter;protein_id=WP_004145929.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4284394 4285344 . + . ID=gene-LI478_RS20770;Name=LI478_RS20770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS20770 NZ_CP085478.1 Protein Homology CDS 4284394 4285344 . + 0 ID=cds-WP_004147088.1;Parent=gene-LI478_RS20770;Dbxref=Genbank:WP_004147088.1;Name=WP_004147088.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225133.1;locus_tag=LI478_RS20770;product=family 43 glycosylhydrolase;protein_id=WP_004147088.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4285580 4286434 . - . ID=gene-LI478_RS20775;Name=ampE;gbkey=Gene;gene=ampE;gene_biotype=protein_coding;locus_tag=LI478_RS20775 NZ_CP085478.1 Protein Homology CDS 4285580 4286434 . - 0 ID=cds-WP_004177406.1;Parent=gene-LI478_RS20775;Dbxref=Genbank:WP_004177406.1;Name=WP_004177406.1;gbkey=CDS;gene=ampE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225132.1;locus_tag=LI478_RS20775;product=beta-lactamase regulator AmpE;protein_id=WP_004177406.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4286431 4286994 . - . ID=gene-LI478_RS20780;Name=ampD;gbkey=Gene;gene=ampD;gene_biotype=protein_coding;locus_tag=LI478_RS20780 NZ_CP085478.1 Protein Homology CDS 4286431 4286994 . - 0 ID=cds-WP_002888692.1;Parent=gene-LI478_RS20780;Dbxref=Genbank:WP_002888692.1;Name=WP_002888692.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=ampD;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225131.1;locus_tag=LI478_RS20780;product=1%2C6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD;protein_id=WP_002888692.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4287128 4288021 . + . ID=gene-LI478_RS20785;Name=nadC;gbkey=Gene;gene=nadC;gene_biotype=protein_coding;locus_tag=LI478_RS20785 NZ_CP085478.1 Protein Homology CDS 4287128 4288021 . + 0 ID=cds-WP_002888684.1;Parent=gene-LI478_RS20785;Dbxref=Genbank:WP_002888684.1;Name=WP_002888684.1;Ontology_term=GO:0019363,GO:0004514;gbkey=CDS;gene=nadC;go_function=nicotinate-nucleotide diphosphorylase (carboxylating) activity|0004514||IEA;go_process=pyridine nucleotide biosynthetic process|0019363||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225130.1;locus_tag=LI478_RS20785;product=carboxylating nicotinate-nucleotide diphosphorylase;protein_id=WP_002888684.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4288203 4288634 . + . ID=gene-LI478_RS20790;Name=ppdD;gbkey=Gene;gene=ppdD;gene_biotype=protein_coding;locus_tag=LI478_RS20790 NZ_CP085478.1 Protein Homology CDS 4288203 4288634 . + 0 ID=cds-WP_002888683.1;Parent=gene-LI478_RS20790;Dbxref=Genbank:WP_002888683.1;Name=WP_002888683.1;gbkey=CDS;gene=ppdD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225129.1;locus_tag=LI478_RS20790;product=prepilin peptidase-dependent pilin;protein_id=WP_002888683.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4288645 4290030 . + . ID=gene-LI478_RS20795;Name=gspE;gbkey=Gene;gene=gspE;gene_biotype=protein_coding;locus_tag=LI478_RS20795 NZ_CP085478.1 Protein Homology CDS 4288645 4290030 . + 0 ID=cds-WP_004145935.1;Parent=gene-LI478_RS20795;Dbxref=Genbank:WP_004145935.1;Name=WP_004145935.1;gbkey=CDS;gene=gspE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225128.1;locus_tag=LI478_RS20795;product=type II secretion system protein GspE;protein_id=WP_004145935.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4290020 4291225 . + . ID=gene-LI478_RS20800;Name=hofC;gbkey=Gene;gene=hofC;gene_biotype=protein_coding;locus_tag=LI478_RS20800 NZ_CP085478.1 Protein Homology CDS 4290020 4291225 . + 0 ID=cds-WP_004147085.1;Parent=gene-LI478_RS20800;Dbxref=Genbank:WP_004147085.1;Name=WP_004147085.1;Ontology_term=GO:0004827;gbkey=CDS;gene=hofC;go_function=proline-tRNA ligase activity|0004827||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225127.1;locus_tag=LI478_RS20800;product=protein transport protein HofC;protein_id=WP_004147085.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4291262 4292305 . - . ID=gene-LI478_RS20805;Name=LI478_RS20805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS20805 NZ_CP085478.1 Protein Homology CDS 4291262 4292305 . - 0 ID=cds-WP_004145938.1;Parent=gene-LI478_RS20805;Dbxref=Genbank:WP_004145938.1;Name=WP_004145938.1;Ontology_term=GO:0009117,GO:0003920;gbkey=CDS;go_function=GMP reductase activity|0003920||IEA;go_process=nucleotide metabolic process|0009117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008461816.1;locus_tag=LI478_RS20805;product=GMP reductase;protein_id=WP_004145938.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4292649 4293269 . + . ID=gene-LI478_RS20810;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=LI478_RS20810 NZ_CP085478.1 Protein Homology CDS 4292649 4293269 . + 0 ID=cds-WP_002888649.1;Parent=gene-LI478_RS20810;Dbxref=Genbank:WP_002888649.1;Name=WP_002888649.1;Note=Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis.;Ontology_term=GO:0015937,GO:0004140,GO:0005737;gbkey=CDS;gene=coaE;go_component=cytoplasm|0005737||IEA;go_function=dephospho-CoA kinase activity|0004140||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004204351.1;locus_tag=LI478_RS20810;product=dephospho-CoA kinase;protein_id=WP_002888649.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4293269 4294012 . + . ID=gene-LI478_RS20815;Name=zapD;gbkey=Gene;gene=zapD;gene_biotype=protein_coding;locus_tag=LI478_RS20815 NZ_CP085478.1 Protein Homology CDS 4293269 4294012 . + 0 ID=cds-WP_020947138.1;Parent=gene-LI478_RS20815;Dbxref=Genbank:WP_020947138.1;Name=WP_020947138.1;gbkey=CDS;gene=zapD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225123.1;locus_tag=LI478_RS20815;product=cell division protein ZapD;protein_id=WP_020947138.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4294022 4294216 . + . ID=gene-LI478_RS20820;Name=yacG;gbkey=Gene;gene=yacG;gene_biotype=protein_coding;locus_tag=LI478_RS20820 NZ_CP085478.1 Protein Homology CDS 4294022 4294216 . + 0 ID=cds-WP_002888644.1;Parent=gene-LI478_RS20820;Dbxref=Genbank:WP_002888644.1;Name=WP_002888644.1;Ontology_term=GO:0006355,GO:0008270;gbkey=CDS;gene=yacG;go_function=zinc ion binding|0008270||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225122.1;locus_tag=LI478_RS20820;product=DNA gyrase inhibitor YacG;protein_id=WP_002888644.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4294269 4294661 . - . ID=gene-LI478_RS20825;Name=mutT;gbkey=Gene;gene=mutT;gene_biotype=protein_coding;locus_tag=LI478_RS20825 NZ_CP085478.1 Protein Homology CDS 4294269 4294661 . - 0 ID=cds-WP_004145942.1;Parent=gene-LI478_RS20825;Dbxref=Genbank:WP_004145942.1;Name=WP_004145942.1;Ontology_term=GO:0006281,GO:0008413;gbkey=CDS;gene=mutT;go_function=8-oxo-7%2C8-dihydroguanosine triphosphate pyrophosphatase activity|0008413||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225121.1;locus_tag=LI478_RS20825;product=8-oxo-dGTP diphosphatase MutT;protein_id=WP_004145942.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4294720 4297425 . - . ID=gene-LI478_RS20830;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=LI478_RS20830 NZ_CP085478.1 Protein Homology CDS 4294720 4297425 . - 0 ID=cds-WP_002888638.1;Parent=gene-LI478_RS20830;Dbxref=Genbank:WP_002888638.1;Name=WP_002888638.1;Ontology_term=GO:0006605,GO:0006886,GO:0017038,GO:0005524;gbkey=CDS;gene=secA;go_function=ATP binding|0005524||IEA;go_process=protein targeting|0006605||IEA,intracellular protein transport|0006886||IEA,protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015704405.1;locus_tag=LI478_RS20830;product=preprotein translocase subunit SecA;protein_id=WP_002888638.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4297488 4297985 . - . ID=gene-LI478_RS20835;Name=secM;gbkey=Gene;gene=secM;gene_biotype=protein_coding;locus_tag=LI478_RS20835 NZ_CP085478.1 Protein Homology CDS 4297488 4297985 . - 0 ID=cds-WP_002888635.1;Parent=gene-LI478_RS20835;Dbxref=Genbank:WP_002888635.1;Name=WP_002888635.1;Ontology_term=GO:0045182;gbkey=CDS;gene=secM;go_function=translation regulator activity|0045182||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000014335.1;locus_tag=LI478_RS20835;product=secA translation cis-regulator SecM;protein_id=WP_002888635.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4298308 4299225 . - . ID=gene-LI478_RS20840;Name=lpxC;gbkey=Gene;gene=lpxC;gene_biotype=protein_coding;locus_tag=LI478_RS20840 NZ_CP085478.1 Protein Homology CDS 4298308 4299225 . - 0 ID=cds-WP_002888632.1;Parent=gene-LI478_RS20840;Dbxref=Genbank:WP_002888632.1;Name=WP_002888632.1;Ontology_term=GO:0009245,GO:0008759;gbkey=CDS;gene=lpxC;go_function=UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity|0008759||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308127.1;locus_tag=LI478_RS20840;product=UDP-3-O-acyl-N-acetylglucosamine deacetylase;protein_id=WP_002888632.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4299326 4300477 . - . ID=gene-LI478_RS20845;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;locus_tag=LI478_RS20845 NZ_CP085478.1 Protein Homology CDS 4299326 4300477 . - 0 ID=cds-WP_002888628.1;Parent=gene-LI478_RS20845;Dbxref=Genbank:WP_002888628.1;Name=WP_002888628.1;Ontology_term=GO:0000910,GO:0003924;gbkey=CDS;gene=ftsZ;go_function=GTPase activity|0003924||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965916.1;locus_tag=LI478_RS20845;product=cell division protein FtsZ;protein_id=WP_002888628.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4300540 4301802 . - . ID=gene-LI478_RS20850;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=LI478_RS20850 NZ_CP085478.1 Protein Homology CDS 4300540 4301802 . - 0 ID=cds-WP_002888625.1;Parent=gene-LI478_RS20850;Dbxref=Genbank:WP_002888625.1;Name=WP_002888625.1;Ontology_term=GO:0051301,GO:0005515;gbkey=CDS;gene=ftsA;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225115.1;locus_tag=LI478_RS20850;product=cell division protein FtsA;protein_id=WP_002888625.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4301799 4302629 . - . ID=gene-LI478_RS20855;Name=ftsQ;gbkey=Gene;gene=ftsQ;gene_biotype=protein_coding;locus_tag=LI478_RS20855 NZ_CP085478.1 Protein Homology CDS 4301799 4302629 . - 0 ID=cds-WP_002888624.1;Parent=gene-LI478_RS20855;Dbxref=Genbank:WP_002888624.1;Name=WP_002888624.1;Ontology_term=GO:0090529;gbkey=CDS;gene=ftsQ;go_process=cell septum assembly|0090529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308124.1;locus_tag=LI478_RS20855;product=cell division protein FtsQ;protein_id=WP_002888624.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4302631 4303551 . - . ID=gene-LI478_RS20860;Name=LI478_RS20860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS20860 NZ_CP085478.1 Protein Homology CDS 4302631 4303551 . - 0 ID=cds-WP_002888623.1;Parent=gene-LI478_RS20860;Dbxref=Genbank:WP_002888623.1;Name=WP_002888623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225113.1;locus_tag=LI478_RS20860;product=D-alanine--D-alanine ligase;protein_id=WP_002888623.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4303544 4305019 . - . ID=gene-LI478_RS20865;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=LI478_RS20865 NZ_CP085478.1 Protein Homology CDS 4303544 4305019 . - 0 ID=cds-WP_004145947.1;Parent=gene-LI478_RS20865;Dbxref=Genbank:WP_004145947.1;Name=WP_004145947.1;Ontology_term=GO:0009252,GO:0008763;gbkey=CDS;gene=murC;go_function=UDP-N-acetylmuramate-L-alanine ligase activity|0008763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459134.1;locus_tag=LI478_RS20865;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=WP_004145947.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4305067 4306137 . - . ID=gene-LI478_RS20870;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=LI478_RS20870 NZ_CP085478.1 Protein Homology CDS 4305067 4306137 . - 0 ID=cds-WP_002888566.1;Parent=gene-LI478_RS20870;Dbxref=Genbank:WP_002888566.1;Name=WP_002888566.1;Ontology_term=GO:0009252,GO:0050511;gbkey=CDS;gene=murG;go_function=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity|0050511||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225110.1;locus_tag=LI478_RS20870;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;protein_id=WP_002888566.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4306134 4307408 . - . ID=gene-LI478_RS20875;Name=ftsW;gbkey=Gene;gene=ftsW;gene_biotype=protein_coding;locus_tag=LI478_RS20875 NZ_CP085478.1 Protein Homology CDS 4306134 4307408 . - 0 ID=cds-WP_002888565.1;Parent=gene-LI478_RS20875;Dbxref=Genbank:WP_002888565.1;Name=WP_002888565.1;Ontology_term=GO:0051301;gbkey=CDS;gene=ftsW;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225109.1;locus_tag=LI478_RS20875;product=cell division protein FtsW;protein_id=WP_002888565.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4307408 4308724 . - . ID=gene-LI478_RS20880;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=LI478_RS20880 NZ_CP085478.1 Protein Homology CDS 4307408 4308724 . - 0 ID=cds-WP_004151364.1;Parent=gene-LI478_RS20880;Dbxref=Genbank:WP_004151364.1;Name=WP_004151364.1;Ontology_term=GO:0009252,GO:0008764;gbkey=CDS;gene=murD;go_function=UDP-N-acetylmuramoylalanine-D-glutamate ligase activity|0008764||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124612.1;locus_tag=LI478_RS20880;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=WP_004151364.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4308727 4309809 . - . ID=gene-LI478_RS20885;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=LI478_RS20885 NZ_CP085478.1 Protein Homology CDS 4308727 4309809 . - 0 ID=cds-WP_002888562.1;Parent=gene-LI478_RS20885;Dbxref=Genbank:WP_002888562.1;Name=WP_002888562.1;Ontology_term=GO:0009252,GO:0008963;gbkey=CDS;gene=mraY;go_function=phospho-N-acetylmuramoyl-pentapeptide-transferase activity|0008963||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124610.1;locus_tag=LI478_RS20885;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=WP_002888562.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4309803 4311161 . - . ID=gene-LI478_RS20890;Name=murF;gbkey=Gene;gene=murF;gene_biotype=protein_coding;locus_tag=LI478_RS20890 NZ_CP085478.1 Protein Homology CDS 4309803 4311161 . - 0 ID=cds-WP_064153127.1;Parent=gene-LI478_RS20890;Dbxref=Genbank:WP_064153127.1;Name=WP_064153127.1;Ontology_term=GO:0009058,GO:0071555,GO:0005524,GO:0047480;gbkey=CDS;gene=murF;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity|0047480||IEA;go_process=biosynthetic process|0009058||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225106.1;locus_tag=LI478_RS20890;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=WP_064153127.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4311158 4312645 . - . ID=gene-LI478_RS20895;Name=murE;gbkey=Gene;gene=murE;gene_biotype=protein_coding;locus_tag=LI478_RS20895 NZ_CP085478.1 Protein Homology CDS 4311158 4312645 . - 0 ID=cds-WP_004182923.1;Parent=gene-LI478_RS20895;Dbxref=Genbank:WP_004182923.1;Name=WP_004182923.1;Ontology_term=GO:0008360,GO:0009058,GO:0051301,GO:0005524,GO:0016881;gbkey=CDS;gene=murE;go_function=ATP binding|0005524||IEA,acid-amino acid ligase activity|0016881||IEA;go_process=regulation of cell shape|0008360||IEA,biosynthetic process|0009058||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225105.1;locus_tag=LI478_RS20895;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=WP_004182923.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4312632 4314398 . - . ID=gene-LI478_RS20900;Name=LI478_RS20900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS20900 NZ_CP085478.1 Protein Homology CDS 4312632 4314398 . - 0 ID=cds-WP_002888559.1;Parent=gene-LI478_RS20900;Dbxref=Genbank:WP_002888559.1;Name=WP_002888559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000642204.1;locus_tag=LI478_RS20900;product=peptidoglycan glycosyltransferase FtsI;protein_id=WP_002888559.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4314414 4314779 . - . ID=gene-LI478_RS20905;Name=ftsL;gbkey=Gene;gene=ftsL;gene_biotype=protein_coding;locus_tag=LI478_RS20905 NZ_CP085478.1 Protein Homology CDS 4314414 4314779 . - 0 ID=cds-WP_002888550.1;Parent=gene-LI478_RS20905;Dbxref=Genbank:WP_002888550.1;Name=WP_002888550.1;gbkey=CDS;gene=ftsL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000625658.1;locus_tag=LI478_RS20905;product=cell division protein FtsL;protein_id=WP_002888550.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4314776 4315717 . - . ID=gene-LI478_RS20910;Name=rsmH;gbkey=Gene;gene=rsmH;gene_biotype=protein_coding;locus_tag=LI478_RS20910 NZ_CP085478.1 Protein Homology CDS 4314776 4315717 . - 0 ID=cds-WP_002888547.1;Parent=gene-LI478_RS20910;Dbxref=Genbank:WP_002888547.1;Name=WP_002888547.1;Ontology_term=GO:0016434;gbkey=CDS;gene=rsmH;go_function=rRNA (cytosine) methyltransferase activity|0016434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124563.1;locus_tag=LI478_RS20910;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;protein_id=WP_002888547.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4315720 4316178 . - . ID=gene-LI478_RS20915;Name=mraZ;gbkey=Gene;gene=mraZ;gene_biotype=protein_coding;locus_tag=LI478_RS20915 NZ_CP085478.1 Protein Homology CDS 4315720 4316178 . - 0 ID=cds-WP_002888541.1;Parent=gene-LI478_RS20915;Dbxref=Genbank:WP_002888541.1;Name=WP_002888541.1;Ontology_term=GO:0051302,GO:0043565;gbkey=CDS;gene=mraZ;go_function=sequence-specific DNA binding|0043565||IEA;go_process=regulation of cell division|0051302||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020325403.1;locus_tag=LI478_RS20915;product=division/cell wall cluster transcriptional repressor MraZ;protein_id=WP_002888541.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4316819 4317823 . - . ID=gene-LI478_RS20920;Name=cra;gbkey=Gene;gene=cra;gene_biotype=protein_coding;locus_tag=LI478_RS20920 NZ_CP085478.1 Protein Homology CDS 4316819 4317823 . - 0 ID=cds-WP_004145952.1;Parent=gene-LI478_RS20920;Dbxref=Genbank:WP_004145952.1;Name=WP_004145952.1;Ontology_term=GO:0006355,GO:0009750,GO:0003677;gbkey=CDS;gene=cra;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to fructose|0009750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225100.1;locus_tag=LI478_RS20920;product=catabolite repressor/activator;protein_id=WP_004145952.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4318004 4318495 . - . ID=gene-LI478_RS20925;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=LI478_RS20925 NZ_CP085478.1 Protein Homology CDS 4318004 4318495 . - 0 ID=cds-WP_002888536.1;Parent=gene-LI478_RS20925;Dbxref=Genbank:WP_002888536.1;Name=WP_002888536.1;Ontology_term=GO:0009082,GO:1990610;gbkey=CDS;gene=ilvN;go_function=acetolactate synthase regulator activity|1990610||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001563086.1;locus_tag=LI478_RS20925;product=acetolactate synthase small subunit;protein_id=WP_002888536.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4318498 4320222 . - . ID=gene-LI478_RS20930;Name=ilvI;gbkey=Gene;gene=ilvI;gene_biotype=protein_coding;locus_tag=LI478_RS20930 NZ_CP085478.1 Protein Homology CDS 4318498 4320222 . - 0 ID=cds-WP_002888534.1;Parent=gene-LI478_RS20930;Dbxref=Genbank:WP_002888534.1;Name=WP_002888534.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvI;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020079613.1;locus_tag=LI478_RS20930;product=acetolactate synthase 3 large subunit;protein_id=WP_002888534.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4320617 4321585 . - . ID=gene-LI478_RS20935;Name=leuO;gbkey=Gene;gene=leuO;gene_biotype=protein_coding;locus_tag=LI478_RS20935 NZ_CP085478.1 Protein Homology CDS 4320617 4321585 . - 0 ID=cds-WP_004192013.1;Parent=gene-LI478_RS20935;Dbxref=Genbank:WP_004192013.1;Name=WP_004192013.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=leuO;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225097.1;locus_tag=LI478_RS20935;product=transcriptional regulator LeuO;protein_id=WP_004192013.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4322198 4322284 . + . ID=gene-LI478_RS20940;Name=leuL;gbkey=Gene;gene=leuL;gene_biotype=protein_coding;locus_tag=LI478_RS20940 NZ_CP085478.1 Protein Homology CDS 4322198 4322284 . + 0 ID=cds-WP_004222662.1;Parent=gene-LI478_RS20940;Dbxref=Genbank:WP_004222662.1;Name=WP_004222662.1;Ontology_term=GO:0009098;gbkey=CDS;gene=leuL;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017901192.1;locus_tag=LI478_RS20940;product=leu operon leader peptide;protein_id=WP_004222662.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4322380 4323951 . + . ID=gene-LI478_RS20945;Name=leuA;gbkey=Gene;gene=leuA;gene_biotype=protein_coding;locus_tag=LI478_RS20945 NZ_CP085478.1 Protein Homology CDS 4322380 4323951 . + 0 ID=cds-WP_004178594.1;Parent=gene-LI478_RS20945;Dbxref=Genbank:WP_004178594.1;Name=WP_004178594.1;Ontology_term=GO:0019752,GO:0003852;gbkey=CDS;gene=leuA;go_function=2-isopropylmalate synthase activity|0003852||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016831521.1;locus_tag=LI478_RS20945;product=2-isopropylmalate synthase;protein_id=WP_004178594.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4323951 4325042 . + . ID=gene-LI478_RS20950;Name=leuB;gbkey=Gene;gene=leuB;gene_biotype=protein_coding;locus_tag=LI478_RS20950 NZ_CP085478.1 Protein Homology CDS 4323951 4325042 . + 0 ID=cds-WP_002888487.1;Parent=gene-LI478_RS20950;Dbxref=Genbank:WP_002888487.1;Name=WP_002888487.1;Ontology_term=GO:0009098,GO:0003862;gbkey=CDS;gene=leuB;go_function=3-isopropylmalate dehydrogenase activity|0003862||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124544.1;locus_tag=LI478_RS20950;product=3-isopropylmalate dehydrogenase;protein_id=WP_002888487.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4325045 4326445 . + . ID=gene-LI478_RS20955;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=LI478_RS20955 NZ_CP085478.1 Protein Homology CDS 4325045 4326445 . + 0 ID=cds-WP_004177417.1;Parent=gene-LI478_RS20955;Dbxref=Genbank:WP_004177417.1;Name=WP_004177417.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuC;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225093.1;locus_tag=LI478_RS20955;product=3-isopropylmalate dehydratase large subunit;protein_id=WP_004177417.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4326456 4327061 . + . ID=gene-LI478_RS20960;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=LI478_RS20960 NZ_CP085478.1 Protein Homology CDS 4326456 4327061 . + 0 ID=cds-WP_002888481.1;Parent=gene-LI478_RS20960;Dbxref=Genbank:WP_002888481.1;Name=WP_002888481.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuD;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225092.1;locus_tag=LI478_RS20960;product=3-isopropylmalate dehydratase small subunit;protein_id=WP_002888481.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4327457 4329490 . + . ID=gene-LI478_RS20965;Name=LI478_RS20965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS20965 NZ_CP085478.1 Protein Homology CDS 4327457 4329490 . + 0 ID=cds-WP_004147052.1;Parent=gene-LI478_RS20965;Dbxref=Genbank:WP_004147052.1;Name=WP_004147052.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225091.1;locus_tag=LI478_RS20965;product=FAD-dependent oxidoreductase;protein_id=WP_004147052.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4329502 4330365 . + . ID=gene-LI478_RS20970;Name=LI478_RS20970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS20970 NZ_CP085478.1 Protein Homology CDS 4329502 4330365 . + 0 ID=cds-WP_002888460.1;Parent=gene-LI478_RS20970;Dbxref=Genbank:WP_002888460.1;Name=WP_002888460.1;Ontology_term=GO:0019632,GO:0004764,GO:0050661;gbkey=CDS;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA,NADP binding|0050661||IEA;go_process=shikimate metabolic process|0019632||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225090.1;locus_tag=LI478_RS20970;product=shikimate dehydrogenase;protein_id=WP_002888460.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4330376 4331590 . + . ID=gene-LI478_RS20975;Name=LI478_RS20975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS20975 NZ_CP085478.1 Protein Homology CDS 4330376 4331590 . + 0 ID=cds-WP_002888458.1;Parent=gene-LI478_RS20975;Dbxref=Genbank:WP_002888458.1;Name=WP_002888458.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225089.1;locus_tag=LI478_RS20975;product=MFS transporter;protein_id=WP_002888458.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4331621 4332376 . + . ID=gene-LI478_RS20980;Name=aroD;gbkey=Gene;gene=aroD;gene_biotype=protein_coding;locus_tag=LI478_RS20980 NZ_CP085478.1 Protein Homology CDS 4331621 4332376 . + 0 ID=cds-WP_004177420.1;Parent=gene-LI478_RS20980;Dbxref=Genbank:WP_004177420.1;Name=WP_004177420.1;Ontology_term=GO:0009423,GO:0003855;gbkey=CDS;gene=aroD;go_function=3-dehydroquinate dehydratase activity|0003855||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225088.1;locus_tag=LI478_RS20980;product=type I 3-dehydroquinate dehydratase;protein_id=WP_004177420.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4332414 4333310 . - . ID=gene-LI478_RS20985;Name=LI478_RS20985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS20985 NZ_CP085478.1 Protein Homology CDS 4332414 4333310 . - 0 ID=cds-WP_064153129.1;Parent=gene-LI478_RS20985;Dbxref=Genbank:WP_064153129.1;Name=WP_064153129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225087.1;locus_tag=LI478_RS20985;product=LysR family transcriptional regulator;protein_id=WP_064153129.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4333542 4334852 . + . ID=gene-LI478_RS20990;Name=LI478_RS20990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS20990 NZ_CP085478.1 Protein Homology CDS 4333542 4334852 . + 0 ID=cds-WP_064153130.1;Parent=gene-LI478_RS20990;Dbxref=Genbank:WP_064153130.1;Name=WP_064153130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225086.1;locus_tag=LI478_RS20990;product=MFS transporter;protein_id=WP_064153130.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4334886 4336070 . - . ID=gene-LI478_RS20995;Name=LI478_RS20995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS20995 NZ_CP085478.1 Protein Homology CDS 4334886 4336070 . - 0 ID=cds-WP_004222652.1;Parent=gene-LI478_RS20995;Dbxref=Genbank:WP_004222652.1;Name=WP_004222652.1;Ontology_term=GO:0008643,GO:0005351;gbkey=CDS;go_function=carbohydrate:proton symporter activity|0005351||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225085.1;locus_tag=LI478_RS20995;product=sugar efflux transporter;protein_id=WP_004222652.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4336338 4336490 . - . ID=gene-LI478_RS21000;Name=LI478_RS21000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS21000 NZ_CP085478.1 Protein Homology CDS 4336338 4336490 . - 0 ID=cds-WP_002888448.1;Parent=gene-LI478_RS21000;Dbxref=Genbank:WP_002888448.1;Name=WP_002888448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225083.1;locus_tag=LI478_RS21000;product=glucose uptake inhibitor SgrT;protein_id=WP_002888448.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4336578 4338233 . + . ID=gene-LI478_RS21005;Name=sgrR;gbkey=Gene;gene=sgrR;gene_biotype=protein_coding;locus_tag=LI478_RS21005 NZ_CP085478.1 Protein Homology CDS 4336578 4338233 . + 0 ID=cds-WP_004145968.1;Parent=gene-LI478_RS21005;Dbxref=Genbank:WP_004145968.1;Name=WP_004145968.1;gbkey=CDS;gene=sgrR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225082.1;locus_tag=LI478_RS21005;product=HTH-type transcriptional regulator SgrR;protein_id=WP_004145968.1;transl_table=11 NZ_CP085478.1 cmsearch riboswitch 4338271 4338490 . + . ID=id-NZ_CP085478.1:4338271..4338490;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_CP085478.1 RefSeq gene 4338523 4339506 . + . ID=gene-LI478_RS21010;Name=thiB;gbkey=Gene;gene=thiB;gene_biotype=protein_coding;locus_tag=LI478_RS21010 NZ_CP085478.1 Protein Homology CDS 4338523 4339506 . + 0 ID=cds-WP_004178584.1;Parent=gene-LI478_RS21010;Dbxref=Genbank:WP_004178584.1;Name=WP_004178584.1;Ontology_term=GO:0015888,GO:0030974,GO:0030975,GO:0030976,GO:0048502,GO:0009897,GO:0030288,GO:0055052;gbkey=CDS;gene=thiB;go_component=external side of plasma membrane|0009897||IEA,outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=thiamine binding|0030975||IEA,thiamine pyrophosphate binding|0030976||IEA,ABC-type thiamine transporter activity|0048502||IEA;go_process=thiamine transport|0015888||IEA,thiamine pyrophosphate transmembrane transport|0030974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225081.1;locus_tag=LI478_RS21010;product=thiamine ABC transporter substrate binding subunit;protein_id=WP_004178584.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4339482 4341092 . + . ID=gene-LI478_RS21015;Name=thiP;gbkey=Gene;gene=thiP;gene_biotype=protein_coding;locus_tag=LI478_RS21015 NZ_CP085478.1 Protein Homology CDS 4339482 4341092 . + 0 ID=cds-WP_032434226.1;Parent=gene-LI478_RS21015;Dbxref=Genbank:WP_032434226.1;Name=WP_032434226.1;gbkey=CDS;gene=thiP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225080.1;locus_tag=LI478_RS21015;product=thiamine/thiamine pyrophosphate ABC transporter permease ThiP;protein_id=WP_032434226.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4341076 4341777 . + . ID=gene-LI478_RS21020;Name=thiQ;gbkey=Gene;gene=thiQ;gene_biotype=protein_coding;locus_tag=LI478_RS21020 NZ_CP085478.1 Protein Homology CDS 4341076 4341777 . + 0 ID=cds-WP_004145970.1;Parent=gene-LI478_RS21020;Dbxref=Genbank:WP_004145970.1;Name=WP_004145970.1;gbkey=CDS;gene=thiQ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225079.1;locus_tag=LI478_RS21020;product=thiamine ABC transporter ATP-binding protein ThiQ;protein_id=WP_004145970.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4341764 4342531 . - . ID=gene-LI478_RS21025;Name=LI478_RS21025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS21025 NZ_CP085478.1 Protein Homology CDS 4341764 4342531 . - 0 ID=cds-WP_002888373.1;Parent=gene-LI478_RS21025;Dbxref=Genbank:WP_002888373.1;Name=WP_002888373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225078.1;locus_tag=LI478_RS21025;product=DedA family protein;protein_id=WP_002888373.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4342660 4343505 . - . ID=gene-LI478_RS21030;Name=araC;gbkey=Gene;gene=araC;gene_biotype=protein_coding;locus_tag=LI478_RS21030 NZ_CP085478.1 Protein Homology CDS 4342660 4343505 . - 0 ID=cds-WP_004145972.1;Parent=gene-LI478_RS21030;Dbxref=Genbank:WP_004145972.1;Name=WP_004145972.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=araC;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225077.1;locus_tag=LI478_RS21030;product=arabinose operon transcriptional regulator AraC;protein_id=WP_004145972.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4343843 4345552 . + . ID=gene-LI478_RS21035;Name=araB;gbkey=Gene;gene=araB;gene_biotype=protein_coding;locus_tag=LI478_RS21035 NZ_CP085478.1 Protein Homology CDS 4343843 4345552 . + 0 ID=cds-WP_032434230.1;Parent=gene-LI478_RS21035;Dbxref=Genbank:WP_032434230.1;Name=WP_032434230.1;Ontology_term=GO:0019568,GO:0008741;gbkey=CDS;gene=araB;go_function=ribulokinase activity|0008741||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225075.1;locus_tag=LI478_RS21035;product=ribulokinase;protein_id=WP_032434230.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4345563 4347065 . + . ID=gene-LI478_RS21040;Name=araA;gbkey=Gene;gene=araA;gene_biotype=protein_coding;locus_tag=LI478_RS21040 NZ_CP085478.1 Protein Homology CDS 4345563 4347065 . + 0 ID=cds-WP_004177424.1;Parent=gene-LI478_RS21040;Dbxref=Genbank:WP_004177424.1;Name=WP_004177424.1;Ontology_term=GO:0005996,GO:0008733;gbkey=CDS;gene=araA;go_function=L-arabinose isomerase activity|0008733||IEA;go_process=monosaccharide metabolic process|0005996||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225074.1;locus_tag=LI478_RS21040;product=L-arabinose isomerase;protein_id=WP_004177424.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4347203 4347898 . + . ID=gene-LI478_RS21045;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=LI478_RS21045 NZ_CP085478.1 Protein Homology CDS 4347203 4347898 . + 0 ID=cds-WP_002888353.1;Parent=gene-LI478_RS21045;Dbxref=Genbank:WP_002888353.1;Name=WP_002888353.1;Ontology_term=GO:0019568,GO:0008742;gbkey=CDS;gene=araD;go_function=L-ribulose-phosphate 4-epimerase activity|0008742||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225073.1;locus_tag=LI478_RS21045;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_002888353.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4348074 4350431 . + . ID=gene-LI478_RS21050;Name=polB;gbkey=Gene;gene=polB;gene_biotype=protein_coding;locus_tag=LI478_RS21050 NZ_CP085478.1 Protein Homology CDS 4348074 4350431 . + 0 ID=cds-WP_004222649.1;Parent=gene-LI478_RS21050;Dbxref=Genbank:WP_004222649.1;Name=WP_004222649.1;Ontology_term=GO:0003677,GO:0003887;gbkey=CDS;gene=polB;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225072.1;locus_tag=LI478_RS21050;product=DNA polymerase II;protein_id=WP_004222649.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4350619 4353525 . + . ID=gene-LI478_RS21055;Name=rapA;gbkey=Gene;gene=rapA;gene_biotype=protein_coding;locus_tag=LI478_RS21055 NZ_CP085478.1 Protein Homology CDS 4350619 4353525 . + 0 ID=cds-WP_064153131.1;Parent=gene-LI478_RS21055;Dbxref=Genbank:WP_064153131.1;Name=WP_064153131.1;Ontology_term=GO:0006355,GO:0005524,GO:0016817,GO:0140658;gbkey=CDS;gene=rapA;go_function=ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides|0016817||IEA,ATP-dependent chromatin remodeler activity|0140658||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001117023.1;locus_tag=LI478_RS21055;product=RNA polymerase-associated protein RapA;protein_id=WP_064153131.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4353538 4354197 . + . ID=gene-LI478_RS21060;Name=rluA;gbkey=Gene;gene=rluA;gene_biotype=protein_coding;locus_tag=LI478_RS21060 NZ_CP085478.1 Protein Homology CDS 4353538 4354197 . + 0 ID=cds-WP_004145980.1;Parent=gene-LI478_RS21060;Dbxref=Genbank:WP_004145980.1;Name=WP_004145980.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=rluA;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225070.1;locus_tag=LI478_RS21060;product=bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA;protein_id=WP_004145980.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4354272 4354811 . - . ID=gene-LI478_RS21065;Name=citX;gbkey=Gene;gene=citX;gene_biotype=protein_coding;locus_tag=LI478_RS21065 NZ_CP085478.1 Protein Homology CDS 4354272 4354811 . - 0 ID=cds-WP_002888347.1;Parent=gene-LI478_RS21065;Dbxref=Genbank:WP_002888347.1;Name=WP_002888347.1;Ontology_term=GO:0051191,GO:0050519;gbkey=CDS;gene=citX;go_function=holo-citrate lyase synthase activity|0050519||IEA;go_process=prosthetic group biosynthetic process|0051191||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225069.1;locus_tag=LI478_RS21065;product=citrate lyase holo-[acyl-carrier protein] synthase;protein_id=WP_002888347.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4354991 4356355 . - . ID=gene-LI478_RS21070;Name=LI478_RS21070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS21070 NZ_CP085478.1 Protein Homology CDS 4354991 4356355 . - 0 ID=cds-WP_002888345.1;Parent=gene-LI478_RS21070;Dbxref=Genbank:WP_002888345.1;Name=WP_002888345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225067.1;locus_tag=LI478_RS21070;product=2-hydroxycarboxylate transporter family protein;protein_id=WP_002888345.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4356680 4358305 . + . ID=gene-LI478_RS21075;Name=LI478_RS21075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS21075 NZ_CP085478.1 Protein Homology CDS 4356680 4358305 . + 0 ID=cds-WP_002888340.1;Parent=gene-LI478_RS21075;Dbxref=Genbank:WP_002888340.1;Name=WP_002888340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225066.1;locus_tag=LI478_RS21075;product=sensor histidine kinase;protein_id=WP_002888340.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4358295 4358993 . + . ID=gene-LI478_RS21080;Name=LI478_RS21080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS21080 NZ_CP085478.1 Protein Homology CDS 4358295 4358993 . + 0 ID=cds-WP_004182906.1;Parent=gene-LI478_RS21080;Dbxref=Genbank:WP_004182906.1;Name=WP_004182906.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225065.1;locus_tag=LI478_RS21080;product=response regulator;protein_id=WP_004182906.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4359026 4359853 . - . ID=gene-LI478_RS21085;Name=djlA;gbkey=Gene;gene=djlA;gene_biotype=protein_coding;locus_tag=LI478_RS21085 NZ_CP085478.1 Protein Homology CDS 4359026 4359853 . - 0 ID=cds-WP_002888332.1;Parent=gene-LI478_RS21085;Dbxref=Genbank:WP_002888332.1;Name=WP_002888332.1;Ontology_term=GO:0051087;gbkey=CDS;gene=djlA;go_function=chaperone binding|0051087||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225064.1;locus_tag=LI478_RS21085;product=co-chaperone DjlA;protein_id=WP_002888332.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4360097 4362445 . + . ID=gene-LI478_RS21090;Name=lptD;gbkey=Gene;gene=lptD;gene_biotype=protein_coding;locus_tag=LI478_RS21090 NZ_CP085478.1 Protein Homology CDS 4360097 4362445 . + 0 ID=cds-WP_004147026.1;Parent=gene-LI478_RS21090;Dbxref=Genbank:WP_004147026.1;Name=WP_004147026.1;Ontology_term=GO:0010033,GO:0015920,GO:0043165,GO:0019867;gbkey=CDS;gene=lptD;go_component=outer membrane|0019867||IEA;go_process=response to organic substance|0010033||IEA,lipopolysaccharide transport|0015920||IEA,Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414596.1;locus_tag=LI478_RS21090;product=LPS assembly protein LptD;protein_id=WP_004147026.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4362500 4363786 . + . ID=gene-LI478_RS21095;Name=surA;gbkey=Gene;gene=surA;gene_biotype=protein_coding;locus_tag=LI478_RS21095 NZ_CP085478.1 Protein Homology CDS 4362500 4363786 . + 0 ID=cds-WP_002888329.1;Parent=gene-LI478_RS21095;Dbxref=Genbank:WP_002888329.1;Name=WP_002888329.1;Ontology_term=GO:0006457,GO:0043165,GO:0050821,GO:0060274,GO:0003755,GO:0042277,GO:0051082,GO:0030288;gbkey=CDS;gene=surA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,peptide binding|0042277||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA,Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA,protein stabilization|0050821||IEA,maintenance of stationary phase|0060274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225062.1;locus_tag=LI478_RS21095;product=peptidylprolyl isomerase SurA;protein_id=WP_002888329.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4363792 4364781 . + . ID=gene-LI478_RS21100;Name=pdxA;gbkey=Gene;gene=pdxA;gene_biotype=protein_coding;locus_tag=LI478_RS21100 NZ_CP085478.1 Protein Homology CDS 4363792 4364781 . + 0 ID=cds-WP_002888327.1;Parent=gene-LI478_RS21100;Dbxref=Genbank:WP_002888327.1;Name=WP_002888327.1;Ontology_term=GO:0008615,GO:0050570;gbkey=CDS;gene=pdxA;go_function=4-hydroxythreonine-4-phosphate dehydrogenase activity|0050570||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225061.1;locus_tag=LI478_RS21100;product=4-hydroxythreonine-4-phosphate dehydrogenase PdxA;protein_id=WP_002888327.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4364778 4365599 . + . ID=gene-LI478_RS21105;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;locus_tag=LI478_RS21105 NZ_CP085478.1 Protein Homology CDS 4364778 4365599 . + 0 ID=cds-WP_002888324.1;Parent=gene-LI478_RS21105;Dbxref=Genbank:WP_002888324.1;Name=WP_002888324.1;Ontology_term=GO:0000179;gbkey=CDS;gene=rsmA;go_function=rRNA (adenine-N6%2CN6-)-dimethyltransferase activity|0000179||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225060.1;locus_tag=LI478_RS21105;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;protein_id=WP_002888324.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4365602 4365979 . + . ID=gene-LI478_RS21110;Name=apaG;gbkey=Gene;gene=apaG;gene_biotype=protein_coding;locus_tag=LI478_RS21110 NZ_CP085478.1 Protein Homology CDS 4365602 4365979 . + 0 ID=cds-WP_002888323.1;Parent=gene-LI478_RS21110;Dbxref=Genbank:WP_002888323.1;Name=WP_002888323.1;gbkey=CDS;gene=apaG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225059.1;locus_tag=LI478_RS21110;product=Co2+/Mg2+ efflux protein ApaG;protein_id=WP_002888323.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4365984 4366832 . + . ID=gene-LI478_RS21115;Name=apaH;gbkey=Gene;gene=apaH;gene_biotype=protein_coding;locus_tag=LI478_RS21115 NZ_CP085478.1 Protein Homology CDS 4365984 4366832 . + 0 ID=cds-WP_004177431.1;Parent=gene-LI478_RS21115;Dbxref=Genbank:WP_004177431.1;Name=WP_004177431.1;Ontology_term=GO:0006139,GO:0008803;gbkey=CDS;gene=apaH;go_function=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) activity|0008803||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225058.1;locus_tag=LI478_RS21115;product=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH;protein_id=WP_004177431.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4367036 4367515 . - . ID=gene-LI478_RS21120;Name=folA;gbkey=Gene;gene=folA;gene_biotype=protein_coding;locus_tag=LI478_RS21120 NZ_CP085478.1 Protein Homology CDS 4367036 4367515 . - 0 ID=cds-WP_002888320.1;Parent=gene-LI478_RS21120;Dbxref=Genbank:WP_002888320.1;Name=WP_002888320.1;Ontology_term=GO:0046654;gbkey=CDS;gene=folA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456510.1;locus_tag=LI478_RS21120;product=type 3 dihydrofolate reductase;protein_id=WP_002888320.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4367689 4369554 . - . ID=gene-LI478_RS21125;Name=kefC;gbkey=Gene;gene=kefC;gene_biotype=protein_coding;locus_tag=LI478_RS21125 NZ_CP085478.1 Protein Homology CDS 4367689 4369554 . - 0 ID=cds-WP_004145992.1;Parent=gene-LI478_RS21125;Dbxref=Genbank:WP_004145992.1;Name=WP_004145992.1;Ontology_term=GO:0006813,GO:0015503;gbkey=CDS;gene=kefC;go_function=glutathione-regulated potassium exporter activity|0015503||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225056.1;locus_tag=LI478_RS21125;product=glutathione-regulated potassium-efflux system protein KefC;protein_id=WP_004145992.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4369547 4370080 . - . ID=gene-LI478_RS21130;Name=kefF;gbkey=Gene;gene=kefF;gene_biotype=protein_coding;locus_tag=LI478_RS21130 NZ_CP085478.1 Protein Homology CDS 4369547 4370080 . - 0 ID=cds-WP_002888068.1;Parent=gene-LI478_RS21130;Dbxref=Genbank:WP_002888068.1;Name=WP_002888068.1;Ontology_term=GO:0006813;gbkey=CDS;gene=kefF;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225055.1;locus_tag=LI478_RS21130;product=glutathione-regulated potassium-efflux system oxidoreductase KefF;protein_id=WP_002888068.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4370212 4370445 . - . ID=gene-LI478_RS21135;Name=LI478_RS21135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS21135 NZ_CP085478.1 Protein Homology CDS 4370212 4370445 . - 0 ID=cds-WP_002888059.1;Parent=gene-LI478_RS21135;Dbxref=Genbank:WP_002888059.1;Name=WP_002888059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225054.1;locus_tag=LI478_RS21135;product=YgdI/YgdR family lipoprotein;protein_id=WP_002888059.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4370615 4373839 . - . ID=gene-LI478_RS21140;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=LI478_RS21140 NZ_CP085478.1 Protein Homology CDS 4370615 4373839 . - 0 ID=cds-WP_227394154.1;Parent=gene-LI478_RS21140;Dbxref=Genbank:WP_227394154.1;Name=WP_227394154.1;Ontology_term=GO:0006807,GO:0005524,GO:0046872;gbkey=CDS;gene=carB;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225053.1;locus_tag=LI478_RS21140;product=carbamoyl-phosphate synthase large subunit;protein_id=WP_227394154.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4373999 4375147 . - . ID=gene-LI478_RS21145;Name=carA;gbkey=Gene;gene=carA;gene_biotype=protein_coding;locus_tag=LI478_RS21145 NZ_CP085478.1 Protein Homology CDS 4373999 4375147 . - 0 ID=cds-WP_004177433.1;Parent=gene-LI478_RS21145;Dbxref=Genbank:WP_004177433.1;Name=WP_004177433.1;Ontology_term=GO:0009220,GO:0004088,GO:0005951;gbkey=CDS;gene=carA;go_component=carbamoyl-phosphate synthase complex|0005951||IEA;go_function=carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity|0004088||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225052.1;locus_tag=LI478_RS21145;product=glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit;protein_id=WP_004177433.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4375605 4376426 . - . ID=gene-LI478_RS21150;Name=dapB;gbkey=Gene;gene=dapB;gene_biotype=protein_coding;locus_tag=LI478_RS21150 NZ_CP085478.1 Protein Homology CDS 4375605 4376426 . - 0 ID=cds-WP_004151369.1;Parent=gene-LI478_RS21150;Dbxref=Genbank:WP_004151369.1;Name=WP_004151369.1;Ontology_term=GO:0009089,GO:0008839;gbkey=CDS;gene=dapB;go_function=4-hydroxy-tetrahydrodipicolinate reductase|0008839||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225049.1;locus_tag=LI478_RS21150;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=WP_004151369.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4376655 4377563 . - . ID=gene-LI478_RS21155;Name=citG;gbkey=Gene;gene=citG;gene_biotype=protein_coding;locus_tag=LI478_RS21155 NZ_CP085478.1 Protein Homology CDS 4376655 4377563 . - 0 ID=cds-WP_004222628.1;Parent=gene-LI478_RS21155;Dbxref=Genbank:WP_004222628.1;Name=WP_004222628.1;Ontology_term=GO:0019361,GO:0046917;gbkey=CDS;gene=citG;go_function=triphosphoribosyl-dephospho-CoA synthase activity|0046917||IEA;go_process=2'-(5''-triphosphoribosyl)-3'-dephospho-CoA biosynthetic process|0019361||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225048.1;locus_tag=LI478_RS21155;product=triphosphoribosyl-dephospho-CoA synthase CitG;protein_id=WP_004222628.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4377582 4379108 . - . ID=gene-LI478_RS21160;Name=citF;gbkey=Gene;gene=citF;gene_biotype=protein_coding;locus_tag=LI478_RS21160 NZ_CP085478.1 Protein Homology CDS 4377582 4379108 . - 0 ID=cds-WP_004222627.1;Parent=gene-LI478_RS21160;Dbxref=Genbank:WP_004222627.1;Name=WP_004222627.1;Ontology_term=GO:0006113,GO:0008814,GO:0008815,GO:0009346;gbkey=CDS;gene=citF;go_component=ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate CoA-transferase activity|0008814||IEA,citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225047.1;locus_tag=LI478_RS21160;product=citrate lyase subunit alpha;protein_id=WP_004222627.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4379119 4379988 . - . ID=gene-LI478_RS21165;Name=citE;gbkey=Gene;gene=citE;gene_biotype=protein_coding;locus_tag=LI478_RS21165 NZ_CP085478.1 Protein Homology CDS 4379119 4379988 . - 0 ID=cds-WP_004151372.1;Parent=gene-LI478_RS21165;Dbxref=Genbank:WP_004151372.1;Name=WP_004151372.1;Ontology_term=GO:0006113,GO:0008815,GO:0009346;gbkey=CDS;gene=citE;go_component=ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225046.1;locus_tag=LI478_RS21165;product=citrate (pro-3S)-lyase subunit beta;protein_id=WP_004151372.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4379985 4380278 . - . ID=gene-LI478_RS21170;Name=citD;gbkey=Gene;gene=citD;gene_biotype=protein_coding;locus_tag=LI478_RS21170 NZ_CP085478.1 Protein Homology CDS 4379985 4380278 . - 0 ID=cds-WP_009309208.1;Parent=gene-LI478_RS21170;Dbxref=Genbank:WP_009309208.1;Name=WP_009309208.1;Ontology_term=GO:0006113,GO:0008815,GO:0009346;gbkey=CDS;gene=citD;go_component=ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225045.1;locus_tag=LI478_RS21170;product=citrate lyase acyl carrier protein;protein_id=WP_009309208.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4380309 4381337 . - . ID=gene-LI478_RS21175;Name=citC;gbkey=Gene;gene=citC;gene_biotype=protein_coding;locus_tag=LI478_RS21175 NZ_CP085478.1 Protein Homology CDS 4380309 4381337 . - 0 ID=cds-WP_004222626.1;Parent=gene-LI478_RS21175;Dbxref=Genbank:WP_004222626.1;Name=WP_004222626.1;Ontology_term=GO:0006101,GO:0008771;gbkey=CDS;gene=citC;go_function=[citrate (pro-3S)-lyase] ligase activity|0008771||IEA;go_process=citrate metabolic process|0006101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225044.1;locus_tag=LI478_RS21175;product=[citrate (pro-3S)-lyase] ligase;protein_id=WP_004222626.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4381594 4382934 . + . ID=gene-LI478_RS21180;Name=citS;gbkey=Gene;gene=citS;gene_biotype=protein_coding;locus_tag=LI478_RS21180 NZ_CP085478.1 Protein Homology CDS 4381594 4382934 . + 0 ID=cds-WP_004151375.1;Parent=gene-LI478_RS21180;Dbxref=Genbank:WP_004151375.1;Name=WP_004151375.1;gbkey=CDS;gene=citS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225043.1;locus_tag=LI478_RS21180;product=citrate/sodium symporter CitS;protein_id=WP_004151375.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4383090 4383341 . + . ID=gene-LI478_RS21185;Name=LI478_RS21185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS21185 NZ_CP085478.1 Protein Homology CDS 4383090 4383341 . + 0 ID=cds-WP_011977638.1;Parent=gene-LI478_RS21185;Dbxref=Genbank:WP_011977638.1;Name=WP_011977638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225042.1;locus_tag=LI478_RS21185;product=oxaloacetate decarboxylase subunit gamma;protein_id=WP_011977638.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4383357 4385147 . + . ID=gene-LI478_RS21190;Name=oadA;gbkey=Gene;gene=oadA;gene_biotype=protein_coding;locus_tag=LI478_RS21190 NZ_CP085478.1 Protein Homology CDS 4383357 4385147 . + 0 ID=cds-WP_064153133.1;Parent=gene-LI478_RS21190;Dbxref=Genbank:WP_064153133.1;Name=WP_064153133.1;Ontology_term=GO:0006814,GO:0008948,GO:0015081;gbkey=CDS;gene=oadA;go_function=oxaloacetate decarboxylase activity|0008948||IEA,sodium ion transmembrane transporter activity|0015081||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225041.1;locus_tag=LI478_RS21190;product=sodium-extruding oxaloacetate decarboxylase subunit alpha;protein_id=WP_064153133.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4385163 4386464 . + . ID=gene-LI478_RS21195;Name=LI478_RS21195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS21195 NZ_CP085478.1 Protein Homology CDS 4385163 4386464 . + 0 ID=cds-WP_004222622.1;Parent=gene-LI478_RS21195;Dbxref=Genbank:WP_004222622.1;Name=WP_004222622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225040.1;locus_tag=LI478_RS21195;product=oxaloacetate decarboxylase subunit beta;protein_id=WP_004222622.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4386636 4388264 . + . ID=gene-LI478_RS21200;Name=LI478_RS21200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS21200 NZ_CP085478.1 Protein Homology CDS 4386636 4388264 . + 0 ID=cds-WP_227394185.1;Parent=gene-LI478_RS21200;Dbxref=Genbank:WP_227394185.1;Name=WP_227394185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016529045.1;locus_tag=LI478_RS21200;product=sensor histidine kinase;protein_id=WP_227394185.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4388257 4388961 . + . ID=gene-LI478_RS21205;Name=LI478_RS21205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS21205 NZ_CP085478.1 Protein Homology CDS 4388257 4388961 . + 0 ID=cds-WP_004222618.1;Parent=gene-LI478_RS21205;Dbxref=Genbank:WP_004222618.1;Name=WP_004222618.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225038.1;locus_tag=LI478_RS21205;product=response regulator;protein_id=WP_004222618.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4388967 4389596 . - . ID=gene-LI478_RS21210;Name=LI478_RS21210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS21210 NZ_CP085478.1 Protein Homology CDS 4388967 4389596 . - 0 ID=cds-WP_048331585.1;Parent=gene-LI478_RS21210;Dbxref=Genbank:WP_048331585.1;Name=WP_048331585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225037.1;locus_tag=LI478_RS21210;product=alanyl-tRNA synthetase;protein_id=WP_048331585.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4389689 4390618 . + . ID=gene-LI478_RS21215;Name=LI478_RS21215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS21215 NZ_CP085478.1 Protein Homology CDS 4389689 4390618 . + 0 ID=cds-WP_002887987.1;Parent=gene-LI478_RS21215;Dbxref=Genbank:WP_002887987.1;Name=WP_002887987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225036.1;locus_tag=LI478_RS21215;product=LysR family transcriptional regulator;protein_id=WP_002887987.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4390566 4390931 . - . ID=gene-LI478_RS21220;Name=LI478_RS21220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS21220 NZ_CP085478.1 Protein Homology CDS 4390566 4390931 . - 0 ID=cds-WP_002887984.1;Parent=gene-LI478_RS21220;Dbxref=Genbank:WP_002887984.1;Name=WP_002887984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002887984.1;locus_tag=LI478_RS21220;product=DUF805 domain-containing protein;protein_id=WP_002887984.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4390962 4391876 . - . ID=gene-LI478_RS21225;Name=rihC;gbkey=Gene;gene=rihC;gene_biotype=protein_coding;locus_tag=LI478_RS21225 NZ_CP085478.1 Protein Homology CDS 4390962 4391876 . - 0 ID=cds-WP_002887981.1;Parent=gene-LI478_RS21225;Dbxref=Genbank:WP_002887981.1;Name=WP_002887981.1;Ontology_term=GO:0016799;gbkey=CDS;gene=rihC;go_function=hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225035.1;locus_tag=LI478_RS21225;product=ribonucleoside hydrolase RihC;protein_id=WP_002887981.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4391943 4392893 . - . ID=gene-LI478_RS21230;Name=ispH;gbkey=Gene;gene=ispH;gene_biotype=protein_coding;gene_synonym=lytB;locus_tag=LI478_RS21230 NZ_CP085478.1 Protein Homology CDS 4391943 4392893 . - 0 ID=cds-WP_002887979.1;Parent=gene-LI478_RS21230;Dbxref=Genbank:WP_002887979.1;Name=WP_002887979.1;Ontology_term=GO:0019288,GO:0050992,GO:0046872,GO:0051745;gbkey=CDS;gene=ispH;go_function=metal ion binding|0046872||IEA,4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity|0051745||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA,dimethylallyl diphosphate biosynthetic process|0050992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124087.1;locus_tag=LI478_RS21230;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=WP_002887979.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4392895 4393344 . - . ID=gene-LI478_RS21235;Name=fkpB;gbkey=Gene;gene=fkpB;gene_biotype=protein_coding;locus_tag=LI478_RS21235 NZ_CP085478.1 Protein Homology CDS 4392895 4393344 . - 0 ID=cds-WP_048975534.1;Parent=gene-LI478_RS21235;Dbxref=Genbank:WP_048975534.1;Name=WP_048975534.1;Ontology_term=GO:0003755;gbkey=CDS;gene=fkpB;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225033.1;locus_tag=LI478_RS21235;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_048975534.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4393460 4393960 . - . ID=gene-LI478_RS21240;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=LI478_RS21240 NZ_CP085478.1 Protein Homology CDS 4393460 4393960 . - 0 ID=cds-WP_002887973.1;Parent=gene-LI478_RS21240;Dbxref=Genbank:WP_002887973.1;Name=WP_002887973.1;Ontology_term=GO:0006508,GO:0009306,GO:0004190,GO:0005886;gbkey=CDS;gene=lspA;go_component=plasma membrane|0005886||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=proteolysis|0006508||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225032.1;locus_tag=LI478_RS21240;product=signal peptidase II;protein_id=WP_002887973.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4393960 4396776 . - . ID=gene-LI478_RS21245;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=LI478_RS21245 NZ_CP085478.1 Protein Homology CDS 4393960 4396776 . - 0 ID=cds-WP_004212580.1;Parent=gene-LI478_RS21245;Dbxref=Genbank:WP_004212580.1;Name=WP_004212580.1;Ontology_term=GO:0006428,GO:0004822,GO:0005737;gbkey=CDS;gene=ileS;go_component=cytoplasm|0005737||IEA;go_function=isoleucine-tRNA ligase activity|0004822||IEA;go_process=isoleucyl-tRNA aminoacylation|0006428||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124083.1;locus_tag=LI478_RS21245;product=isoleucine--tRNA ligase;protein_id=WP_004212580.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4396820 4397758 . - . ID=gene-LI478_RS21250;Name=ribF;gbkey=Gene;gene=ribF;gene_biotype=protein_coding;locus_tag=LI478_RS21250 NZ_CP085478.1 Protein Homology CDS 4396820 4397758 . - 0 ID=cds-WP_002887969.1;Parent=gene-LI478_RS21250;Dbxref=Genbank:WP_002887969.1;Name=WP_002887969.1;Ontology_term=GO:0003919;gbkey=CDS;gene=ribF;go_function=FMN adenylyltransferase activity|0003919||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004204236.1;locus_tag=LI478_RS21250;product=bifunctional riboflavin kinase/FAD synthetase;protein_id=WP_002887969.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4398088 4398351 . + . ID=gene-LI478_RS21255;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=LI478_RS21255 NZ_CP085478.1 Protein Homology CDS 4398088 4398351 . + 0 ID=cds-WP_002887965.1;Parent=gene-LI478_RS21255;Dbxref=Genbank:WP_002887965.1;Name=WP_002887965.1;Ontology_term=GO:0006412,GO:0003735,GO:0000312,GO:0022627;gbkey=CDS;gene=rpsT;go_component=plastid small ribosomal subunit|0000312||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006117633.1;locus_tag=LI478_RS21255;product=30S ribosomal protein S20;protein_id=WP_002887965.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4398471 4399367 . - . ID=gene-LI478_RS21260;Name=nhaR;gbkey=Gene;gene=nhaR;gene_biotype=protein_coding;locus_tag=LI478_RS21260 NZ_CP085478.1 Protein Homology CDS 4398471 4399367 . - 0 ID=cds-WP_047667409.1;Parent=gene-LI478_RS21260;Dbxref=Genbank:WP_047667409.1;Name=WP_047667409.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=nhaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225027.1;locus_tag=LI478_RS21260;product=transcriptional activator NhaR;protein_id=WP_047667409.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4399422 4400597 . - . ID=gene-LI478_RS21265;Name=nhaA;gbkey=Gene;gene=nhaA;gene_biotype=protein_coding;locus_tag=LI478_RS21265 NZ_CP085478.1 Protein Homology CDS 4399422 4400597 . - 0 ID=cds-WP_008807496.1;Parent=gene-LI478_RS21265;Dbxref=Genbank:WP_008807496.1;Name=WP_008807496.1;Ontology_term=GO:0006814,GO:1902600,GO:0015385;gbkey=CDS;gene=nhaA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016831528.1;locus_tag=LI478_RS21265;product=Na+/H+ antiporter NhaA;protein_id=WP_008807496.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4400776 4401909 . - . ID=gene-LI478_RS21270;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=LI478_RS21270 NZ_CP085478.1 Protein Homology CDS 4400776 4401909 . - 0 ID=cds-WP_002887955.1;Parent=gene-LI478_RS21270;Dbxref=Genbank:WP_002887955.1;Name=WP_002887955.1;Ontology_term=GO:0006457,GO:0009408,GO:0005515;gbkey=CDS;gene=dnaJ;go_function=protein binding|0005515||IEA;go_process=protein folding|0006457||IEA,response to heat|0009408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225025.1;locus_tag=LI478_RS21270;product=molecular chaperone DnaJ;protein_id=WP_002887955.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4401997 4403913 . - . ID=gene-LI478_RS21275;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=LI478_RS21275 NZ_CP085478.1 Protein Homology CDS 4401997 4403913 . - 0 ID=cds-WP_004146997.1;Parent=gene-LI478_RS21275;Dbxref=Genbank:WP_004146997.1;Name=WP_004146997.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=dnaK;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001737966.1;locus_tag=LI478_RS21275;product=molecular chaperone DnaK;protein_id=WP_004146997.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4404299 4404703 . + . ID=gene-LI478_RS21280;Name=LI478_RS21280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS21280 NZ_CP085478.1 Protein Homology CDS 4404299 4404703 . + 0 ID=cds-WP_004182892.1;Parent=gene-LI478_RS21280;Dbxref=Genbank:WP_004182892.1;Name=WP_004182892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225023.1;locus_tag=LI478_RS21280;product=DUF2541 family protein;protein_id=WP_004182892.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4404731 4405480 . + . ID=gene-LI478_RS21285;Name=msyB;gbkey=Gene;gene=msyB;gene_biotype=protein_coding;locus_tag=LI478_RS21285 NZ_CP085478.1 Protein Homology CDS 4404731 4405480 . + 0 ID=cds-WP_064153134.1;Parent=gene-LI478_RS21285;Dbxref=Genbank:WP_064153134.1;Name=WP_064153134.1;gbkey=CDS;gene=msyB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225022.1;locus_tag=LI478_RS21285;product=acidic protein MsyB;protein_id=WP_064153134.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4405569 4406135 . + . ID=gene-LI478_RS21290;Name=satP;gbkey=Gene;gene=satP;gene_biotype=protein_coding;locus_tag=LI478_RS21290 NZ_CP085478.1 Protein Homology CDS 4405569 4406135 . + 0 ID=cds-WP_002887905.1;Parent=gene-LI478_RS21290;Dbxref=Genbank:WP_002887905.1;Name=WP_002887905.1;Ontology_term=GO:0016020;gbkey=CDS;gene=satP;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225021.1;locus_tag=LI478_RS21290;product=acetate uptake transporter;protein_id=WP_002887905.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4406198 4407502 . - . ID=gene-LI478_RS21295;Name=LI478_RS21295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS21295 NZ_CP085478.1 Protein Homology CDS 4406198 4407502 . - 0 ID=cds-WP_025368456.1;Parent=gene-LI478_RS21295;Dbxref=Genbank:WP_025368456.1;Name=WP_025368456.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225020.1;locus_tag=LI478_RS21295;product=MFS transporter;protein_id=WP_025368456.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4407622 4408209 . - . ID=gene-LI478_RS21300;Name=mog;gbkey=Gene;gene=mog;gene_biotype=protein_coding;locus_tag=LI478_RS21300 NZ_CP085478.1 Protein Homology CDS 4407622 4408209 . - 0 ID=cds-WP_002887898.1;Parent=gene-LI478_RS21300;Dbxref=Genbank:WP_002887898.1;Name=WP_002887898.1;Ontology_term=GO:0006777;gbkey=CDS;gene=mog;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225019.1;locus_tag=LI478_RS21300;product=molybdopterin adenylyltransferase;protein_id=WP_002887898.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4408309 4409262 . - . ID=gene-LI478_RS21305;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=LI478_RS21305 NZ_CP085478.1 Protein Homology CDS 4408309 4409262 . - 0 ID=cds-WP_002887897.1;Parent=gene-LI478_RS21305;Dbxref=Genbank:WP_002887897.1;Name=WP_002887897.1;Ontology_term=GO:0006098,GO:0004801;gbkey=CDS;gene=tal;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225018.1;locus_tag=LI478_RS21305;product=transaldolase;protein_id=WP_002887897.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4409465 4410895 . + . ID=gene-LI478_RS21310;Name=LI478_RS21310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS21310 NZ_CP085478.1 Protein Homology CDS 4409465 4410895 . + 0 ID=cds-WP_002887871.1;Parent=gene-LI478_RS21310;Dbxref=Genbank:WP_002887871.1;Name=WP_002887871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225017.1;locus_tag=LI478_RS21310;product=sodium:alanine symporter family protein;protein_id=WP_002887871.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4410973 4411746 . + . ID=gene-LI478_RS21315;Name=yaaA;gbkey=Gene;gene=yaaA;gene_biotype=protein_coding;locus_tag=LI478_RS21315 NZ_CP085478.1 Protein Homology CDS 4410973 4411746 . + 0 ID=cds-WP_002887869.1;Parent=gene-LI478_RS21315;Dbxref=Genbank:WP_002887869.1;Name=WP_002887869.1;gbkey=CDS;gene=yaaA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225016.1;locus_tag=LI478_RS21315;product=peroxide stress protein YaaA;protein_id=WP_002887869.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4411815 4412192 . - . ID=gene-LI478_RS21320;Name=LI478_RS21320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS21320 NZ_CP085478.1 Protein Homology CDS 4411815 4412192 . - 0 ID=cds-WP_002887866.1;Parent=gene-LI478_RS21320;Dbxref=Genbank:WP_002887866.1;Name=WP_002887866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225015.1;locus_tag=LI478_RS21320;product=hypothetical protein;protein_id=WP_002887866.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4412508 4413788 . - . ID=gene-LI478_RS21325;Name=thrC;gbkey=Gene;gene=thrC;gene_biotype=protein_coding;locus_tag=LI478_RS21325 NZ_CP085478.1 Protein Homology CDS 4412508 4413788 . - 0 ID=cds-WP_002887863.1;Parent=gene-LI478_RS21325;Dbxref=Genbank:WP_002887863.1;Name=WP_002887863.1;Ontology_term=GO:0009088,GO:0004795;gbkey=CDS;gene=thrC;go_function=threonine synthase activity|0004795||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225014.1;locus_tag=LI478_RS21325;product=threonine synthase;protein_id=WP_002887863.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4413792 4414721 . - . ID=gene-LI478_RS21330;Name=thrB;gbkey=Gene;gene=thrB;gene_biotype=protein_coding;locus_tag=LI478_RS21330 NZ_CP085478.1 Protein Homology CDS 4413792 4414721 . - 0 ID=cds-WP_002887853.1;Parent=gene-LI478_RS21330;Dbxref=Genbank:WP_002887853.1;Name=WP_002887853.1;Ontology_term=GO:0009088,GO:0004413;gbkey=CDS;gene=thrB;go_function=homoserine kinase activity|0004413||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225013.1;locus_tag=LI478_RS21330;product=homoserine kinase;protein_id=WP_002887853.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4414723 4417185 . - . ID=gene-LI478_RS21335;Name=thrA;gbkey=Gene;gene=thrA;gene_biotype=protein_coding;locus_tag=LI478_RS21335 NZ_CP085478.1 Protein Homology CDS 4414723 4417185 . - 0 ID=cds-WP_002887848.1;Parent=gene-LI478_RS21335;Dbxref=Genbank:WP_002887848.1;Name=WP_002887848.1;Ontology_term=GO:0008652,GO:0009067,GO:0004072,GO:0004412,GO:0050661;gbkey=CDS;gene=thrA;go_function=aspartate kinase activity|0004072||IEA,homoserine dehydrogenase activity|0004412||IEA,NADP binding|0050661||IEA;go_process=amino acid biosynthetic process|0008652||IEA,aspartate family amino acid biosynthetic process|0009067||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124053.1;locus_tag=LI478_RS21335;product=bifunctional aspartate kinase/homoserine dehydrogenase I;protein_id=WP_002887848.1;transl_table=11 NZ_CP085478.1 cmsearch sequence_feature 4417211 4417328 . - . ID=id-NZ_CP085478.1:4417211..4417328;Dbxref=RFAM:RF00506;Note=Thr leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1 NZ_CP085478.1 RefSeq gene 4417267 4417335 . - . ID=gene-LI478_RS21340;Name=thrL;gbkey=Gene;gene=thrL;gene_biotype=protein_coding;locus_tag=LI478_RS21340 NZ_CP085478.1 Protein Homology CDS 4417267 4417335 . - 0 ID=cds-WP_004222578.1;Parent=gene-LI478_RS21340;Dbxref=Genbank:WP_004222578.1;Name=WP_004222578.1;Ontology_term=GO:0031554,GO:0031556;gbkey=CDS;gene=thrL;go_process=regulation of termination of DNA-templated transcription|0031554||IEA,transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004222578.1;locus_tag=LI478_RS21340;product=thr operon leader peptide;protein_id=WP_004222578.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4417547 4418233 . - . ID=gene-LI478_RS21345;Name=LI478_RS21345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS21345 NZ_CP085478.1 Protein Homology CDS 4417547 4418233 . - 0 ID=cds-WP_002887846.1;Parent=gene-LI478_RS21345;Dbxref=Genbank:WP_002887846.1;Name=WP_002887846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225010.1;locus_tag=LI478_RS21345;product=tRNA/rRNA methyltransferase;protein_id=WP_002887846.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4418630 4418770 . - . ID=gene-LI478_RS21350;Name=LI478_RS21350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS21350 NZ_CP085478.1 Protein Homology CDS 4418630 4418770 . - 0 ID=cds-WP_004146984.1;Parent=gene-LI478_RS21350;Dbxref=Genbank:WP_004146984.1;Name=WP_004146984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463455.1;locus_tag=LI478_RS21350;product=hypothetical protein;protein_id=WP_004146984.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4418866 4419582 . + . ID=gene-LI478_RS21355;Name=arcA;gbkey=Gene;gene=arcA;gene_biotype=protein_coding;locus_tag=LI478_RS21355 NZ_CP085478.1 Protein Homology CDS 4418866 4419582 . + 0 ID=cds-WP_002887843.1;Parent=gene-LI478_RS21355;Dbxref=Genbank:WP_002887843.1;Name=WP_002887843.1;gbkey=CDS;gene=arcA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003621071.1;locus_tag=LI478_RS21355;product=two-component system response regulator ArcA;protein_id=WP_002887843.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4419645 4421003 . - . ID=gene-LI478_RS21360;Name=creD;gbkey=Gene;gene=creD;gene_biotype=protein_coding;locus_tag=LI478_RS21360 NZ_CP085478.1 Protein Homology CDS 4419645 4421003 . - 0 ID=cds-WP_025368458.1;Parent=gene-LI478_RS21360;Dbxref=Genbank:WP_025368458.1;Name=WP_025368458.1;gbkey=CDS;gene=creD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225008.1;locus_tag=LI478_RS21360;product=cell envelope integrity protein CreD;protein_id=WP_025368458.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4421064 4422488 . - . ID=gene-LI478_RS21365;Name=creC;gbkey=Gene;gene=creC;gene_biotype=protein_coding;locus_tag=LI478_RS21365 NZ_CP085478.1 Protein Homology CDS 4421064 4422488 . - 0 ID=cds-WP_002887823.1;Parent=gene-LI478_RS21365;Dbxref=Genbank:WP_002887823.1;Name=WP_002887823.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=creC;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225007.1;locus_tag=LI478_RS21365;product=two-component system sensor histidine kinase CreC;protein_id=WP_002887823.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4422488 4423177 . - . ID=gene-LI478_RS21370;Name=creB;gbkey=Gene;gene=creB;gene_biotype=protein_coding;locus_tag=LI478_RS21370 NZ_CP085478.1 Protein Homology CDS 4422488 4423177 . - 0 ID=cds-WP_004182877.1;Parent=gene-LI478_RS21370;Dbxref=Genbank:WP_004182877.1;Name=WP_004182877.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=creB;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225006.1;locus_tag=LI478_RS21370;product=two-component system response regulator CreB;protein_id=WP_004182877.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4423190 4423663 . - . ID=gene-LI478_RS21375;Name=creA;gbkey=Gene;gene=creA;gene_biotype=protein_coding;locus_tag=LI478_RS21375 NZ_CP085478.1 Protein Homology CDS 4423190 4423663 . - 0 ID=cds-WP_002887814.1;Parent=gene-LI478_RS21375;Dbxref=Genbank:WP_002887814.1;Name=WP_002887814.1;gbkey=CDS;gene=creA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225005.1;locus_tag=LI478_RS21375;product=protein CreA;protein_id=WP_002887814.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4423873 4424742 . + . ID=gene-LI478_RS21380;Name=robA;gbkey=Gene;gene=robA;gene_biotype=protein_coding;locus_tag=LI478_RS21380 NZ_CP085478.1 Protein Homology CDS 4423873 4424742 . + 0 ID=cds-WP_002887812.1;Parent=gene-LI478_RS21380;Dbxref=Genbank:WP_002887812.1;Name=WP_002887812.1;gbkey=CDS;gene=robA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225004.1;locus_tag=LI478_RS21380;product=MDR efflux pump AcrAB transcriptional activator RobA;protein_id=WP_002887812.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4424739 4425386 . - . ID=gene-LI478_RS21385;Name=gpmB;gbkey=Gene;gene=gpmB;gene_biotype=protein_coding;locus_tag=LI478_RS21385 NZ_CP085478.1 Protein Homology CDS 4424739 4425386 . - 0 ID=cds-WP_002887811.1;Parent=gene-LI478_RS21385;Dbxref=Genbank:WP_002887811.1;Name=WP_002887811.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmB;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225003.1;locus_tag=LI478_RS21385;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase GpmB;protein_id=WP_002887811.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4425500 4426015 . + . ID=gene-LI478_RS21390;Name=yjjX;gbkey=Gene;gene=yjjX;gene_biotype=protein_coding;locus_tag=LI478_RS21390 NZ_CP085478.1 Protein Homology CDS 4425500 4426015 . + 0 ID=cds-WP_004178555.1;Parent=gene-LI478_RS21390;Dbxref=Genbank:WP_004178555.1;Name=WP_004178555.1;gbkey=CDS;gene=yjjX;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225002.1;locus_tag=LI478_RS21390;product=inosine/xanthosine triphosphatase;protein_id=WP_004178555.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4426002 4426331 . - . ID=gene-LI478_RS21395;Name=trpR;gbkey=Gene;gene=trpR;gene_biotype=protein_coding;locus_tag=LI478_RS21395 NZ_CP085478.1 Protein Homology CDS 4426002 4426331 . - 0 ID=cds-WP_002887809.1;Parent=gene-LI478_RS21395;Dbxref=Genbank:WP_002887809.1;Name=WP_002887809.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=trpR;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225001.1;locus_tag=LI478_RS21395;product=trp operon repressor;protein_id=WP_002887809.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4426420 4428357 . - . ID=gene-LI478_RS21400;Name=sltY;gbkey=Gene;gene=sltY;gene_biotype=protein_coding;locus_tag=LI478_RS21400 NZ_CP085478.1 Protein Homology CDS 4426420 4428357 . - 0 ID=cds-WP_064153142.1;Parent=gene-LI478_RS21400;Dbxref=Genbank:WP_064153142.1;Name=WP_064153142.1;Ontology_term=GO:0000270,GO:0004553,GO:0008933,GO:0016020,GO:0042597;gbkey=CDS;gene=sltY;go_component=membrane|0016020||IEA,periplasmic space|0042597||IEA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225000.1;locus_tag=LI478_RS21400;product=murein transglycosylase;protein_id=WP_064153142.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4428586 4430253 . + . ID=gene-LI478_RS21405;Name=ettA;gbkey=Gene;gene=ettA;gene_biotype=protein_coding;locus_tag=LI478_RS21405 NZ_CP085478.1 Protein Homology CDS 4428586 4430253 . + 0 ID=cds-WP_002887805.1;Parent=gene-LI478_RS21405;Dbxref=Genbank:WP_002887805.1;Name=WP_002887805.1;Ontology_term=GO:0045900,GO:0005524;gbkey=CDS;gene=ettA;go_function=ATP binding|0005524||IEA;go_process=negative regulation of translational elongation|0045900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017145039.1;locus_tag=LI478_RS21405;product=energy-dependent translational throttle protein EttA;protein_id=WP_002887805.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4430347 4431579 . - . ID=gene-LI478_RS21410;Name=nadR;gbkey=Gene;gene=nadR;gene_biotype=protein_coding;locus_tag=LI478_RS21410 NZ_CP085478.1 Protein Homology CDS 4430347 4431579 . - 0 ID=cds-WP_002887802.1;Parent=gene-LI478_RS21410;Dbxref=Genbank:WP_002887802.1;Name=WP_002887802.1;Ontology_term=GO:0009058,GO:0000309,GO:0003677,GO:0050262;gbkey=CDS;gene=nadR;go_function=nicotinamide-nucleotide adenylyltransferase activity|0000309||IEA,DNA binding|0003677||IEA,ribosylnicotinamide kinase activity|0050262||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224998.1;locus_tag=LI478_RS21410;product=multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR;protein_id=WP_002887802.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4431601 4432983 . - . ID=gene-LI478_RS21415;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;locus_tag=LI478_RS21415 NZ_CP085478.1 Protein Homology CDS 4431601 4432983 . - 0 ID=cds-WP_002887800.1;Parent=gene-LI478_RS21415;Dbxref=Genbank:WP_002887800.1;Name=WP_002887800.1;Ontology_term=GO:0006281,GO:0005524;gbkey=CDS;gene=radA;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001399683.1;locus_tag=LI478_RS21415;product=DNA repair protein RadA;protein_id=WP_002887800.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4432993 4433964 . - . ID=gene-LI478_RS21420;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=LI478_RS21420 NZ_CP085478.1 Protein Homology CDS 4432993 4433964 . - 0 ID=cds-WP_004177487.1;Parent=gene-LI478_RS21420;Dbxref=Genbank:WP_004177487.1;Name=WP_004177487.1;Ontology_term=GO:0006564,GO:0036424;gbkey=CDS;gene=serB;go_function=L-phosphoserine phosphatase activity|0036424||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224996.1;locus_tag=LI478_RS21420;product=phosphoserine phosphatase;protein_id=WP_004177487.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4434069 4434716 . + . ID=gene-LI478_RS21425;Name=LI478_RS21425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS21425 NZ_CP085478.1 Protein Homology CDS 4434069 4434716 . + 0 ID=cds-WP_002887794.1;Parent=gene-LI478_RS21425;Dbxref=Genbank:WP_002887794.1;Name=WP_002887794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224995.1;locus_tag=LI478_RS21425;product=YtjB family periplasmic protein;protein_id=WP_002887794.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4434716 4435732 . + . ID=gene-LI478_RS21430;Name=lplA;gbkey=Gene;gene=lplA;gene_biotype=protein_coding;locus_tag=LI478_RS21430 NZ_CP085478.1 Protein Homology CDS 4434716 4435732 . + 0 ID=cds-WP_004146971.1;Parent=gene-LI478_RS21430;Dbxref=Genbank:WP_004146971.1;Name=WP_004146971.1;gbkey=CDS;gene=lplA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224994.1;locus_tag=LI478_RS21430;product=lipoate--protein ligase LplA;protein_id=WP_004146971.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4435812 4436531 . - . ID=gene-LI478_RS21435;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=protein_coding;locus_tag=LI478_RS21435 NZ_CP085478.1 Protein Homology CDS 4435812 4436531 . - 0 ID=cds-WP_002887789.1;Parent=gene-LI478_RS21435;Dbxref=Genbank:WP_002887789.1;Name=WP_002887789.1;Ontology_term=GO:0043096,GO:0004731;gbkey=CDS;gene=deoD;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=purine nucleobase salvage|0043096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224993.1;locus_tag=LI478_RS21435;product=purine-nucleoside phosphorylase;protein_id=WP_002887789.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4436634 4437857 . - . ID=gene-LI478_RS21440;Name=deoB;gbkey=Gene;gene=deoB;gene_biotype=protein_coding;locus_tag=LI478_RS21440 NZ_CP085478.1 Protein Homology CDS 4436634 4437857 . - 0 ID=cds-WP_004151380.1;Parent=gene-LI478_RS21440;Dbxref=Genbank:WP_004151380.1;Name=WP_004151380.1;Ontology_term=GO:0006139,GO:0008973;gbkey=CDS;gene=deoB;go_function=phosphopentomutase activity|0008973||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224992.1;locus_tag=LI478_RS21440;product=phosphopentomutase;protein_id=WP_004151380.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4437910 4439232 . - . ID=gene-LI478_RS21445;Name=deoA;gbkey=Gene;gene=deoA;gene_biotype=protein_coding;locus_tag=LI478_RS21445 NZ_CP085478.1 Protein Homology CDS 4437910 4439232 . - 0 ID=cds-WP_002887787.1;Parent=gene-LI478_RS21445;Dbxref=Genbank:WP_002887787.1;Name=WP_002887787.1;Ontology_term=GO:0006139,GO:0009032;gbkey=CDS;gene=deoA;go_function=thymidine phosphorylase activity|0009032||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224991.1;locus_tag=LI478_RS21445;product=thymidine phosphorylase;protein_id=WP_002887787.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4439346 4440125 . - . ID=gene-LI478_RS21450;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=LI478_RS21450 NZ_CP085478.1 Protein Homology CDS 4439346 4440125 . - 0 ID=cds-WP_002887784.1;Parent=gene-LI478_RS21450;Dbxref=Genbank:WP_002887784.1;Name=WP_002887784.1;Ontology_term=GO:0009264,GO:0004139;gbkey=CDS;gene=deoC;go_function=deoxyribose-phosphate aldolase activity|0004139||IEA;go_process=deoxyribonucleotide catabolic process|0009264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005097947.1;locus_tag=LI478_RS21450;product=deoxyribose-phosphate aldolase;protein_id=WP_002887784.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4440542 4441819 . - . ID=gene-LI478_RS21455;Name=LI478_RS21455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS21455 NZ_CP085478.1 Protein Homology CDS 4440542 4441819 . - 0 ID=cds-WP_004146034.1;Parent=gene-LI478_RS21455;Dbxref=Genbank:WP_004146034.1;Name=WP_004146034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224989.1;locus_tag=LI478_RS21455;product=NupC/NupG family nucleoside CNT transporter;protein_id=WP_004146034.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4441950 4442744 . - . ID=gene-LI478_RS21460;Name=LI478_RS21460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS21460 NZ_CP085478.1 Protein Homology CDS 4441950 4442744 . - 0 ID=cds-WP_021462664.1;Parent=gene-LI478_RS21460;Dbxref=Genbank:WP_021462664.1;Name=WP_021462664.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224988.1;locus_tag=LI478_RS21460;product=TatD family hydrolase;protein_id=WP_021462664.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4442741 4443814 . - . ID=gene-LI478_RS21465;Name=LI478_RS21465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS21465 NZ_CP085478.1 Protein Homology CDS 4442741 4443814 . - 0 ID=cds-WP_021462665.1;Parent=gene-LI478_RS21465;Dbxref=Genbank:WP_021462665.1;Name=WP_021462665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224987.1;locus_tag=LI478_RS21465;product=patatin family protein;protein_id=WP_021462665.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4443968 4444129 . - . ID=gene-LI478_RS21470;Name=LI478_RS21470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS21470 NZ_CP085478.1 Protein Homology CDS 4443968 4444129 . - 0 ID=cds-WP_002887716.1;Parent=gene-LI478_RS21470;Dbxref=Genbank:WP_002887716.1;Name=WP_002887716.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002887716.1;locus_tag=LI478_RS21470;product=DUF1328 domain-containing protein;protein_id=WP_002887716.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4444259 4444879 . - . ID=gene-LI478_RS21475;Name=osmY;gbkey=Gene;gene=osmY;gene_biotype=protein_coding;locus_tag=LI478_RS21475 NZ_CP085478.1 Protein Homology CDS 4444259 4444879 . - 0 ID=cds-WP_004146042.1;Parent=gene-LI478_RS21475;Dbxref=Genbank:WP_004146042.1;Name=WP_004146042.1;gbkey=CDS;gene=osmY;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224985.1;locus_tag=LI478_RS21475;product=molecular chaperone OsmY;protein_id=WP_004146042.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4445099 4446688 . - . ID=gene-LI478_RS21480;Name=prfC;gbkey=Gene;gene=prfC;gene_biotype=protein_coding;locus_tag=LI478_RS21480 NZ_CP085478.1 Protein Homology CDS 4445099 4446688 . - 0 ID=cds-WP_002887711.1;Parent=gene-LI478_RS21480;Dbxref=Genbank:WP_002887711.1;Name=WP_002887711.1;Ontology_term=GO:0006415,GO:0003747,GO:0005525;gbkey=CDS;gene=prfC;go_function=translation release factor activity|0003747||IEA,GTP binding|0005525||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123889.1;locus_tag=LI478_RS21480;product=peptide chain release factor 3;protein_id=WP_002887711.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4446779 4447456 . - . ID=gene-LI478_RS21485;Name=yjjG;gbkey=Gene;gene=yjjG;gene_biotype=protein_coding;locus_tag=LI478_RS21485 NZ_CP085478.1 Protein Homology CDS 4446779 4447456 . - 0 ID=cds-WP_021313589.1;Parent=gene-LI478_RS21485;Dbxref=Genbank:WP_021313589.1;Name=WP_021313589.1;Ontology_term=GO:0008253;gbkey=CDS;gene=yjjG;go_function=5'-nucleotidase activity|0008253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224983.1;locus_tag=LI478_RS21485;product=pyrimidine 5'-nucleotidase;protein_id=WP_021313589.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4447471 4447917 . - . ID=gene-LI478_RS21490;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;locus_tag=LI478_RS21490 NZ_CP085478.1 Protein Homology CDS 4447471 4447917 . - 0 ID=cds-WP_002887706.1;Parent=gene-LI478_RS21490;Dbxref=Genbank:WP_002887706.1;Name=WP_002887706.1;Ontology_term=GO:0006474,GO:0008080;gbkey=CDS;gene=rimI;go_function=N-acetyltransferase activity|0008080||IEA;go_process=N-terminal protein amino acid acetylation|0006474||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224982.1;locus_tag=LI478_RS21490;product=ribosomal protein S18-alanine N-acetyltransferase;protein_id=WP_002887706.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4447886 4448299 . - . ID=gene-LI478_RS21495;Name=LI478_RS21495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS21495 NZ_CP085478.1 Protein Homology CDS 4447886 4448299 . - 0 ID=cds-WP_064153135.1;Parent=gene-LI478_RS21495;Dbxref=Genbank:WP_064153135.1;Name=WP_064153135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224981.1;locus_tag=LI478_RS21495;product=DNA polymerase III subunit psi;protein_id=WP_064153135.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4448402 4449430 . + . ID=gene-LI478_RS21500;Name=rsmC;gbkey=Gene;gene=rsmC;gene_biotype=protein_coding;locus_tag=LI478_RS21500 NZ_CP085478.1 Protein Homology CDS 4448402 4449430 . + 0 ID=cds-WP_004177499.1;Parent=gene-LI478_RS21500;Dbxref=Genbank:WP_004177499.1;Name=WP_004177499.1;Ontology_term=GO:0006364,GO:0003676,GO:0008990;gbkey=CDS;gene=rsmC;go_function=nucleic acid binding|0003676||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224980.1;locus_tag=LI478_RS21500;product=16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC;protein_id=WP_004177499.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4449602 4449688 . + . ID=gene-LI478_RS21505;Name=LI478_RS21505;gbkey=Gene;gene_biotype=tRNA;locus_tag=LI478_RS21505 NZ_CP085478.1 tRNAscan-SE tRNA 4449602 4449688 . + . ID=rna-LI478_RS21505;Parent=gene-LI478_RS21505;anticodon=(pos:4449636..4449638);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS21505;product=tRNA-Leu NZ_CP085478.1 tRNAscan-SE exon 4449602 4449688 . + . ID=exon-LI478_RS21505-1;Parent=rna-LI478_RS21505;anticodon=(pos:4449636..4449638);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS21505;product=tRNA-Leu NZ_CP085478.1 RefSeq gene 4449717 4449803 . + . ID=gene-LI478_RS21510;Name=LI478_RS21510;gbkey=Gene;gene_biotype=tRNA;locus_tag=LI478_RS21510 NZ_CP085478.1 tRNAscan-SE tRNA 4449717 4449803 . + . ID=rna-LI478_RS21510;Parent=gene-LI478_RS21510;anticodon=(pos:4449751..4449753);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS21510;product=tRNA-Leu NZ_CP085478.1 tRNAscan-SE exon 4449717 4449803 . + . ID=exon-LI478_RS21510-1;Parent=rna-LI478_RS21510;anticodon=(pos:4449751..4449753);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS21510;product=tRNA-Leu NZ_CP085478.1 RefSeq gene 4449835 4449921 . + . ID=gene-LI478_RS21515;Name=LI478_RS21515;gbkey=Gene;gene_biotype=tRNA;locus_tag=LI478_RS21515 NZ_CP085478.1 tRNAscan-SE tRNA 4449835 4449921 . + . ID=rna-LI478_RS21515;Parent=gene-LI478_RS21515;anticodon=(pos:4449869..4449871);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS21515;product=tRNA-Leu NZ_CP085478.1 tRNAscan-SE exon 4449835 4449921 . + . ID=exon-LI478_RS21515-1;Parent=rna-LI478_RS21515;anticodon=(pos:4449869..4449871);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS21515;product=tRNA-Leu NZ_CP085478.1 RefSeq gene 4449943 4450182 . - . ID=gene-LI478_RS21520;Name=LI478_RS21520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS21520 NZ_CP085478.1 Protein Homology CDS 4449943 4450182 . - 0 ID=cds-WP_002887654.1;Parent=gene-LI478_RS21520;Dbxref=Genbank:WP_002887654.1;Name=WP_002887654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002887654.1;locus_tag=LI478_RS21520;product=DUF1435 domain-containing protein;protein_id=WP_002887654.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4450253 4450423 . + . ID=gene-LI478_RS21525;Name=LI478_RS21525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS21525 NZ_CP085478.1 Protein Homology CDS 4450253 4450423 . + 0 ID=cds-WP_004221147.1;Parent=gene-LI478_RS21525;Dbxref=Genbank:WP_004221147.1;Name=WP_004221147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224978.1;locus_tag=LI478_RS21525;product=hypothetical protein;protein_id=WP_004221147.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4450447 4451490 . + . ID=gene-LI478_RS21530;Name=LI478_RS21530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS21530 NZ_CP085478.1 Protein Homology CDS 4450447 4451490 . + 0 ID=cds-WP_087749940.1;Parent=gene-LI478_RS21530;Dbxref=Genbank:WP_087749940.1;Name=WP_087749940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224977.1;locus_tag=LI478_RS21530;product=GGDEF domain-containing protein;protein_id=WP_087749940.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4451597 4452385 . + . ID=gene-LI478_RS21535;Name=fhuF;gbkey=Gene;gene=fhuF;gene_biotype=protein_coding;locus_tag=LI478_RS21535 NZ_CP085478.1 Protein Homology CDS 4451597 4452385 . + 0 ID=cds-WP_002887652.1;Parent=gene-LI478_RS21535;Dbxref=Genbank:WP_002887652.1;Name=WP_002887652.1;Ontology_term=GO:0051537;gbkey=CDS;gene=fhuF;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224976.1;locus_tag=LI478_RS21535;product=siderophore-iron reductase FhuF;protein_id=WP_002887652.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4452435 4453778 . - . ID=gene-LI478_RS21540;Name=LI478_RS21540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS21540 NZ_CP085478.1 Protein Homology CDS 4452435 4453778 . - 0 ID=cds-WP_002887650.1;Parent=gene-LI478_RS21540;Dbxref=Genbank:WP_002887650.1;Name=WP_002887650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224975.1;locus_tag=LI478_RS21540;product=PTS cellobiose transporter subunit IIC;protein_id=WP_002887650.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4454117 4454575 . + . ID=gene-LI478_RS21545;Name=LI478_RS21545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS21545 NZ_CP085478.1 Protein Homology CDS 4454117 4454575 . + 0 ID=cds-WP_004151383.1;Parent=gene-LI478_RS21545;Dbxref=Genbank:WP_004151383.1;Name=WP_004151383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224974.1;locus_tag=LI478_RS21545;product=YbaK/EbsC family protein;protein_id=WP_004151383.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4454581 4455255 . - . ID=gene-LI478_RS21550;Name=bglJ;gbkey=Gene;gene=bglJ;gene_biotype=protein_coding;locus_tag=LI478_RS21550 NZ_CP085478.1 Protein Homology CDS 4454581 4455255 . - 0 ID=cds-WP_002887647.1;Parent=gene-LI478_RS21550;Dbxref=Genbank:WP_002887647.1;Name=WP_002887647.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=bglJ;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224973.1;locus_tag=LI478_RS21550;product=DNA-binding transcriptional activator BglJ;protein_id=WP_002887647.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4455216 4455938 . - . ID=gene-LI478_RS21555;Name=LI478_RS21555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS21555 NZ_CP085478.1 Protein Homology CDS 4455216 4455938 . - 0 ID=cds-WP_002887645.1;Parent=gene-LI478_RS21555;Dbxref=Genbank:WP_002887645.1;Name=WP_002887645.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224972.1;locus_tag=LI478_RS21555;product=LuxR C-terminal-related transcriptional regulator;protein_id=WP_002887645.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4456204 4457085 . - . ID=gene-LI478_RS21560;Name=LI478_RS21560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS21560 NZ_CP085478.1 Protein Homology CDS 4456204 4457085 . - 0 ID=cds-WP_020805204.1;Parent=gene-LI478_RS21560;Dbxref=Genbank:WP_020805204.1;Name=WP_020805204.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224971.1;locus_tag=LI478_RS21560;product=helix-turn-helix domain-containing protein;protein_id=WP_020805204.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4457102 4458286 . - . ID=gene-LI478_RS21565;Name=pobA;gbkey=Gene;gene=pobA;gene_biotype=protein_coding;locus_tag=LI478_RS21565 NZ_CP085478.1 Protein Homology CDS 4457102 4458286 . - 0 ID=cds-WP_004146953.1;Parent=gene-LI478_RS21565;Dbxref=Genbank:WP_004146953.1;Name=WP_004146953.1;Ontology_term=GO:0018874,GO:0018659;gbkey=CDS;gene=pobA;go_function=4-hydroxybenzoate 3-monooxygenase activity|0018659||IEA;go_process=benzoate metabolic process|0018874||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224970.1;locus_tag=LI478_RS21565;product=4-hydroxybenzoate 3-monooxygenase;protein_id=WP_004146953.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4458566 4459342 . + . ID=gene-LI478_RS21570;Name=LI478_RS21570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS21570 NZ_CP085478.1 Protein Homology CDS 4458566 4459342 . + 0 ID=cds-WP_004146059.1;Parent=gene-LI478_RS21570;Dbxref=Genbank:WP_004146059.1;Name=WP_004146059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224968.1;locus_tag=LI478_RS21570;product=threonine/serine exporter ThrE family protein;protein_id=WP_004146059.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4459333 4459806 . + . ID=gene-LI478_RS21575;Name=LI478_RS21575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS21575 NZ_CP085478.1 Protein Homology CDS 4459333 4459806 . + 0 ID=cds-WP_002887631.1;Parent=gene-LI478_RS21575;Dbxref=Genbank:WP_002887631.1;Name=WP_002887631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224967.1;locus_tag=LI478_RS21575;product=threonine/serine exporter;protein_id=WP_002887631.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4459909 4460448 . + . ID=gene-LI478_RS21580;Name=dnaT;gbkey=Gene;gene=dnaT;gene_biotype=protein_coding;locus_tag=LI478_RS21580 NZ_CP085478.1 Protein Homology CDS 4459909 4460448 . + 0 ID=cds-WP_002887624.1;Parent=gene-LI478_RS21580;Dbxref=Genbank:WP_002887624.1;Name=WP_002887624.1;gbkey=CDS;gene=dnaT;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224966.1;locus_tag=LI478_RS21580;product=primosomal protein DnaT;protein_id=WP_002887624.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4460451 4461188 . + . ID=gene-LI478_RS21585;Name=dnaC;gbkey=Gene;gene=dnaC;gene_biotype=protein_coding;locus_tag=LI478_RS21585 NZ_CP085478.1 Protein Homology CDS 4460451 4461188 . + 0 ID=cds-WP_002887623.1;Parent=gene-LI478_RS21585;Dbxref=Genbank:WP_002887623.1;Name=WP_002887623.1;gbkey=CDS;gene=dnaC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224965.1;locus_tag=LI478_RS21585;product=DNA replication protein DnaC;protein_id=WP_002887623.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4461254 4461745 . + . ID=gene-LI478_RS21590;Name=LI478_RS21590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS21590 NZ_CP085478.1 Protein Homology CDS 4461254 4461745 . + 0 ID=cds-WP_004177504.1;Parent=gene-LI478_RS21590;Dbxref=Genbank:WP_004177504.1;Name=WP_004177504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224964.1;locus_tag=LI478_RS21590;product=DUF2501 domain-containing protein;protein_id=WP_004177504.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4462003 4464294 . + . ID=gene-LI478_RS21595;Name=opgB;gbkey=Gene;gene=opgB;gene_biotype=protein_coding;locus_tag=LI478_RS21595 NZ_CP085478.1 Protein Homology CDS 4462003 4464294 . + 0 ID=cds-WP_023342556.1;Parent=gene-LI478_RS21595;Dbxref=Genbank:WP_023342556.1;Name=WP_023342556.1;Ontology_term=GO:0008484;gbkey=CDS;gene=opgB;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224963.1;locus_tag=LI478_RS21595;product=phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase;protein_id=WP_023342556.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4464349 4465281 . - . ID=gene-LI478_RS21600;Name=LI478_RS21600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS21600 NZ_CP085478.1 Protein Homology CDS 4464349 4465281 . - 0 ID=cds-WP_020802805.1;Parent=gene-LI478_RS21600;Dbxref=Genbank:WP_020802805.1;Name=WP_020802805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224962.1;locus_tag=LI478_RS21600;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WP_020802805.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4465415 4466425 . - . ID=gene-LI478_RS21605;Name=LI478_RS21605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS21605 NZ_CP085478.1 Protein Homology CDS 4465415 4466425 . - 0 ID=cds-WP_004178531.1;Parent=gene-LI478_RS21605;Dbxref=Genbank:WP_004178531.1;Name=WP_004178531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224961.1;locus_tag=LI478_RS21605;product=SIS domain-containing protein;protein_id=WP_004178531.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4466443 4467504 . - . ID=gene-LI478_RS21610;Name=LI478_RS21610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS21610 NZ_CP085478.1 Protein Homology CDS 4466443 4467504 . - 0 ID=cds-WP_004888694.1;Parent=gene-LI478_RS21610;Dbxref=Genbank:WP_004888694.1;Name=WP_004888694.1;Ontology_term=GO:1901135,GO:0097367;gbkey=CDS;go_function=carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224960.1;locus_tag=LI478_RS21610;product=SIS domain-containing protein;protein_id=WP_004888694.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4467517 4468368 . - . ID=gene-LI478_RS21615;Name=LI478_RS21615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS21615 NZ_CP085478.1 Protein Homology CDS 4467517 4468368 . - 0 ID=cds-WP_023280846.1;Parent=gene-LI478_RS21615;Dbxref=Genbank:WP_023280846.1;Name=WP_023280846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224959.1;locus_tag=LI478_RS21615;product=PTS system mannose/fructose/sorbose family transporter subunit IID;protein_id=WP_023280846.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4468346 4469125 . - . ID=gene-LI478_RS21620;Name=LI478_RS21620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS21620 NZ_CP085478.1 Protein Homology CDS 4468346 4469125 . - 0 ID=cds-WP_002887608.1;Parent=gene-LI478_RS21620;Dbxref=Genbank:WP_002887608.1;Name=WP_002887608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224958.1;locus_tag=LI478_RS21620;product=PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC;protein_id=WP_002887608.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4469142 4469612 . - . ID=gene-LI478_RS21625;Name=LI478_RS21625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS21625 NZ_CP085478.1 Protein Homology CDS 4469142 4469612 . - 0 ID=cds-WP_002887607.1;Parent=gene-LI478_RS21625;Dbxref=Genbank:WP_002887607.1;Name=WP_002887607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224957.1;locus_tag=LI478_RS21625;product=PTS sugar transporter subunit IIB;protein_id=WP_002887607.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4469627 4470049 . - . ID=gene-LI478_RS21630;Name=LI478_RS21630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS21630 NZ_CP085478.1 Protein Homology CDS 4469627 4470049 . - 0 ID=cds-WP_023288216.1;Parent=gene-LI478_RS21630;Dbxref=Genbank:WP_023288216.1;Name=WP_023288216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224956.1;locus_tag=LI478_RS21630;product=PTS sugar transporter subunit IIA;protein_id=WP_023288216.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4470150 4472915 . - . ID=gene-LI478_RS21635;Name=LI478_RS21635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS21635 NZ_CP085478.1 Protein Homology CDS 4470150 4472915 . - 0 ID=cds-WP_023288215.1;Parent=gene-LI478_RS21635;Dbxref=Genbank:WP_023288215.1;Name=WP_023288215.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224955.1;locus_tag=LI478_RS21635;product=sigma-54-dependent transcriptional regulator;protein_id=WP_023288215.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4473016 4473846 . - . ID=gene-LI478_RS21640;Name=LI478_RS21640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS21640 NZ_CP085478.1 Protein Homology CDS 4473016 4473846 . - 0 ID=cds-WP_032415917.1;Parent=gene-LI478_RS21640;Dbxref=Genbank:WP_032415917.1;Name=WP_032415917.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004894480.1;locus_tag=LI478_RS21640;product=GNAT family N-acetyltransferase;protein_id=WP_032415917.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4473879 4474412 . + . ID=gene-LI478_RS21645;Name=LI478_RS21645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS21645 NZ_CP085478.1 Protein Homology CDS 4473879 4474412 . + 0 ID=cds-WP_032415915.1;Parent=gene-LI478_RS21645;Dbxref=Genbank:WP_032415915.1;Name=WP_032415915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004146075.1;locus_tag=LI478_RS21645;product=GNAT family N-acetyltransferase;protein_id=WP_032415915.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4474483 4475346 . + . ID=gene-LI478_RS21650;Name=LI478_RS21650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS21650 NZ_CP085478.1 Protein Homology CDS 4474483 4475346 . + 0 ID=cds-WP_004177525.1;Parent=gene-LI478_RS21650;Dbxref=Genbank:WP_004177525.1;Name=WP_004177525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224948.1;locus_tag=LI478_RS21650;product=MurR/RpiR family transcriptional regulator;protein_id=WP_004177525.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4475343 4475942 . - . ID=gene-LI478_RS21655;Name=LI478_RS21655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS21655 NZ_CP085478.1 Protein Homology CDS 4475343 4475942 . - 0 ID=cds-WP_004146077.1;Parent=gene-LI478_RS21655;Dbxref=Genbank:WP_004146077.1;Name=WP_004146077.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224947.1;locus_tag=LI478_RS21655;product=2-dehydro-3-deoxy-6-phosphogalactonate aldolase;protein_id=WP_004146077.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4475929 4476801 . - . ID=gene-LI478_RS21660;Name=LI478_RS21660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS21660 NZ_CP085478.1 Protein Homology CDS 4475929 4476801 . - 0 ID=cds-WP_032415914.1;Parent=gene-LI478_RS21660;Dbxref=Genbank:WP_032415914.1;Name=WP_032415914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224946.1;locus_tag=LI478_RS21660;product=2-dehydro-3-deoxygalactonokinase;protein_id=WP_032415914.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4476811 4478298 . - . ID=gene-LI478_RS21665;Name=LI478_RS21665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS21665 NZ_CP085478.1 Protein Homology CDS 4476811 4478298 . - 0 ID=cds-WP_004222484.1;Parent=gene-LI478_RS21665;Dbxref=Genbank:WP_004222484.1;Name=WP_004222484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224945.1;locus_tag=LI478_RS21665;product=sodium:solute symporter family protein;protein_id=WP_004222484.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4478484 4478876 . - . ID=gene-LI478_RS21670;Name=LI478_RS21670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS21670 NZ_CP085478.1 Protein Homology CDS 4478484 4478876 . - 0 ID=cds-WP_002887555.1;Parent=gene-LI478_RS21670;Dbxref=Genbank:WP_002887555.1;Name=WP_002887555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224944.1;locus_tag=LI478_RS21670;product=RidA family protein;protein_id=WP_002887555.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4478887 4480326 . - . ID=gene-LI478_RS21675;Name=LI478_RS21675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS21675 NZ_CP085478.1 Protein Homology CDS 4478887 4480326 . - 0 ID=cds-WP_032439182.1;Parent=gene-LI478_RS21675;Dbxref=Genbank:WP_032439182.1;Name=WP_032439182.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224943.1;locus_tag=LI478_RS21675;product=D-aminoacylase;protein_id=WP_032439182.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4480304 4480483 . + . ID=gene-LI478_RS21680;Name=LI478_RS21680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS21680 NZ_CP085478.1 Protein Homology CDS 4480304 4480483 . + 0 ID=cds-WP_004230613.1;Parent=gene-LI478_RS21680;Dbxref=Genbank:WP_004230613.1;Name=WP_004230613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224942.1;locus_tag=LI478_RS21680;product=hypothetical protein;protein_id=WP_004230613.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4480527 4481747 . + . ID=gene-LI478_RS21685;Name=LI478_RS21685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS21685 NZ_CP085478.1 Protein Homology CDS 4480527 4481747 . + 0 ID=cds-WP_032415913.1;Parent=gene-LI478_RS21685;Dbxref=Genbank:WP_032415913.1;Name=WP_032415913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224941.1;locus_tag=LI478_RS21685;product=amino acid deaminase;protein_id=WP_032415913.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4481952 4482968 . - . ID=gene-LI478_RS21690;Name=LI478_RS21690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS21690 NZ_CP085478.1 Protein Homology CDS 4481952 4482968 . - 0 ID=cds-WP_032415912.1;Parent=gene-LI478_RS21690;Dbxref=Genbank:WP_032415912.1;Name=WP_032415912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224940.1;locus_tag=LI478_RS21690;product=Ldh family oxidoreductase;protein_id=WP_032415912.1;transl_table=11 NZ_CP085478.1 RefSeq pseudogene 4483059 4483575 . + . ID=gene-LI478_RS21695;Name=LI478_RS21695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS21695;partial=true;pseudo=true;start_range=.,4483059 NZ_CP085478.1 Protein Homology CDS 4483059 4483575 . + 0 ID=cds-LI478_RS21695;Parent=gene-LI478_RS21695;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004211353.1;locus_tag=LI478_RS21695;partial=true;product=hypothetical protein;pseudo=true;start_range=.,4483059;transl_table=11 NZ_CP085478.1 RefSeq gene 4483579 4484019 . - . ID=gene-LI478_RS21700;Name=hpaR;gbkey=Gene;gene=hpaR;gene_biotype=protein_coding;locus_tag=LI478_RS21700 NZ_CP085478.1 Protein Homology CDS 4483579 4484019 . - 0 ID=cds-WP_002887503.1;Parent=gene-LI478_RS21700;Dbxref=Genbank:WP_002887503.1;Name=WP_002887503.1;Ontology_term=GO:0045892,GO:0003700;gbkey=CDS;gene=hpaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224937.1;locus_tag=LI478_RS21700;product=homoprotocatechuate degradation operon regulator HpaR;protein_id=WP_002887503.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4484084 4484248 . + . ID=gene-LI478_RS21705;Name=LI478_RS21705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS21705 NZ_CP085478.1 Protein Homology CDS 4484084 4484248 . + 0 ID=cds-WP_032415930.1;Parent=gene-LI478_RS21705;Dbxref=Genbank:WP_032415930.1;Name=WP_032415930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224936.1;locus_tag=LI478_RS21705;product=hypothetical protein;protein_id=WP_032415930.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4484307 4484939 . + . ID=gene-LI478_RS21710;Name=LI478_RS21710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS21710 NZ_CP085478.1 Protein Homology CDS 4484307 4484939 . + 0 ID=cds-WP_023280837.1;Parent=gene-LI478_RS21710;Dbxref=Genbank:WP_023280837.1;Name=WP_023280837.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224935.1;locus_tag=LI478_RS21710;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_023280837.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4484936 4485700 . + . ID=gene-LI478_RS21715;Name=LI478_RS21715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS21715 NZ_CP085478.1 Protein Homology CDS 4484936 4485700 . + 0 ID=cds-WP_032415910.1;Parent=gene-LI478_RS21715;Dbxref=Genbank:WP_032415910.1;Name=WP_032415910.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460074.1;locus_tag=LI478_RS21715;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_032415910.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4485697 4487163 . + . ID=gene-LI478_RS21720;Name=hpaE;gbkey=Gene;gene=hpaE;gene_biotype=protein_coding;locus_tag=LI478_RS21720 NZ_CP085478.1 Protein Homology CDS 4485697 4487163 . + 0 ID=cds-WP_009485357.1;Parent=gene-LI478_RS21720;Dbxref=Genbank:WP_009485357.1;Name=WP_009485357.1;Ontology_term=GO:1901023,GO:0018480;gbkey=CDS;gene=hpaE;go_function=5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase activity|0018480||IEA;go_process=4-hydroxyphenylacetate catabolic process|1901023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224933.1;locus_tag=LI478_RS21720;product=5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase;protein_id=WP_009485357.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4487165 4488022 . + . ID=gene-LI478_RS21725;Name=hpaD;gbkey=Gene;gene=hpaD;gene_biotype=protein_coding;locus_tag=LI478_RS21725 NZ_CP085478.1 Protein Homology CDS 4487165 4488022 . + 0 ID=cds-WP_009485358.1;Parent=gene-LI478_RS21725;Dbxref=Genbank:WP_009485358.1;Name=WP_009485358.1;Ontology_term=GO:0006725,GO:0008198,GO:0008687;gbkey=CDS;gene=hpaD;go_function=ferrous iron binding|0008198||IEA,3%2C4-dihydroxyphenylacetate 2%2C3-dioxygenase activity|0008687||IEA;go_process=cellular aromatic compound metabolic process|0006725||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224932.1;locus_tag=LI478_RS21725;product=3%2C4-dihydroxyphenylacetate 2%2C3-dioxygenase;protein_id=WP_009485358.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4488032 4488412 . + . ID=gene-LI478_RS21730;Name=LI478_RS21730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS21730 NZ_CP085478.1 Protein Homology CDS 4488032 4488412 . + 0 ID=cds-WP_015368431.1;Parent=gene-LI478_RS21730;Dbxref=Genbank:WP_015368431.1;Name=WP_015368431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224931.1;locus_tag=LI478_RS21730;product=5-carboxymethyl-2-hydroxymuconate Delta-isomerase;protein_id=WP_015368431.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4488521 4489324 . + . ID=gene-LI478_RS21735;Name=hpaH;gbkey=Gene;gene=hpaH;gene_biotype=protein_coding;locus_tag=LI478_RS21735 NZ_CP085478.1 Protein Homology CDS 4488521 4489324 . + 0 ID=cds-WP_002887487.1;Parent=gene-LI478_RS21735;Dbxref=Genbank:WP_002887487.1;Name=WP_002887487.1;Ontology_term=GO:0018817;gbkey=CDS;gene=hpaH;go_function=2-oxo-hept-3-ene-1%2C7-dioate hydratase activity|0018817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224930.1;locus_tag=LI478_RS21735;product=2-oxo-hepta-3-ene-1%2C7-dioic acid hydratase;protein_id=WP_002887487.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4489335 4490132 . + . ID=gene-LI478_RS21740;Name=hpaI;gbkey=Gene;gene=hpaI;gene_biotype=protein_coding;locus_tag=LI478_RS21740 NZ_CP085478.1 Protein Homology CDS 4489335 4490132 . + 0 ID=cds-WP_032415909.1;Parent=gene-LI478_RS21740;Dbxref=Genbank:WP_032415909.1;Name=WP_032415909.1;Ontology_term=GO:0018802;gbkey=CDS;gene=hpaI;go_function=2%2C4-dihydroxyhept-2-ene-1%2C7-dioate aldolase activity|0018802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224929.1;locus_tag=LI478_RS21740;product=4-hydroxy-2-oxoheptanedioate aldolase;protein_id=WP_032415909.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4490154 4491512 . + . ID=gene-LI478_RS21745;Name=hpaX;gbkey=Gene;gene=hpaX;gene_biotype=protein_coding;locus_tag=LI478_RS21745 NZ_CP085478.1 Protein Homology CDS 4490154 4491512 . + 0 ID=cds-WP_002887477.1;Parent=gene-LI478_RS21745;Dbxref=Genbank:WP_002887477.1;Name=WP_002887477.1;Ontology_term=GO:0055085,GO:1900754,GO:1901241;gbkey=CDS;gene=hpaX;go_function=4-hydroxyphenylacetate transmembrane transporter activity|1901241||IEA;go_process=transmembrane transport|0055085||IEA,4-hydroxyphenylacetate transport|1900754||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224928.1;locus_tag=LI478_RS21745;product=4-hydroxyphenylacetate permease;protein_id=WP_002887477.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4491522 4492412 . + . ID=gene-LI478_RS21750;Name=hpaA;gbkey=Gene;gene=hpaA;gene_biotype=protein_coding;locus_tag=LI478_RS21750 NZ_CP085478.1 Protein Homology CDS 4491522 4492412 . + 0 ID=cds-WP_064153136.1;Parent=gene-LI478_RS21750;Dbxref=Genbank:WP_064153136.1;Name=WP_064153136.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=hpaA;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224927.1;locus_tag=LI478_RS21750;product=4-hydroxyphenylacetate catabolism regulatory protein HpaA;protein_id=WP_064153136.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4492638 4494200 . + . ID=gene-LI478_RS21755;Name=hpaB;gbkey=Gene;gene=hpaB;gene_biotype=protein_coding;locus_tag=LI478_RS21755 NZ_CP085478.1 Protein Homology CDS 4492638 4494200 . + 0 ID=cds-WP_002887473.1;Parent=gene-LI478_RS21755;Dbxref=Genbank:WP_002887473.1;Name=WP_002887473.1;gbkey=CDS;gene=hpaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000801462.1;locus_tag=LI478_RS21755;product=4-hydroxyphenylacetate 3-monooxygenase%2C oxygenase component;protein_id=WP_002887473.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4494220 4494732 . + . ID=gene-LI478_RS21760;Name=LI478_RS21760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS21760 NZ_CP085478.1 Protein Homology CDS 4494220 4494732 . + 0 ID=cds-WP_002887467.1;Parent=gene-LI478_RS21760;Dbxref=Genbank:WP_002887467.1;Name=WP_002887467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224925.1;locus_tag=LI478_RS21760;product=4-hydroxyphenylacetate 3-monooxygenase reductase subunit;protein_id=WP_002887467.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4494807 4495517 . - . ID=gene-LI478_RS21765;Name=LI478_RS21765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS21765 NZ_CP085478.1 Protein Homology CDS 4494807 4495517 . - 0 ID=cds-WP_002887465.1;Parent=gene-LI478_RS21765;Dbxref=Genbank:WP_002887465.1;Name=WP_002887465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224924.1;locus_tag=LI478_RS21765;product=ascBF operon repressor;protein_id=WP_002887465.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4495645 4496268 . - . ID=gene-LI478_RS21770;Name=LI478_RS21770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS21770 NZ_CP085478.1 Protein Homology CDS 4495645 4496268 . - 0 ID=cds-WP_009485366.1;Parent=gene-LI478_RS21770;Dbxref=Genbank:WP_009485366.1;Name=WP_009485366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224923.1;locus_tag=LI478_RS21770;product=hypothetical protein;protein_id=WP_009485366.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4496653 4498803 . + . ID=gene-LI478_RS21775;Name=LI478_RS21775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS21775 NZ_CP085478.1 Protein Homology CDS 4496653 4498803 . + 0 ID=cds-WP_002887454.1;Parent=gene-LI478_RS21775;Dbxref=Genbank:WP_002887454.1;Name=WP_002887454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224922.1;locus_tag=LI478_RS21775;product=carbon starvation protein;protein_id=WP_002887454.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4498913 4499116 . + . ID=gene-LI478_RS21780;Name=LI478_RS21780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS21780 NZ_CP085478.1 Protein Homology CDS 4498913 4499116 . + 0 ID=cds-WP_002887451.1;Parent=gene-LI478_RS21780;Dbxref=Genbank:WP_002887451.1;Name=WP_002887451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224921.1;locus_tag=LI478_RS21780;product=YbdD/YjiX family protein;protein_id=WP_002887451.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4499128 4500084 . + . ID=gene-LI478_RS21785;Name=yjiA;gbkey=Gene;gene=yjiA;gene_biotype=protein_coding;locus_tag=LI478_RS21785 NZ_CP085478.1 Protein Homology CDS 4499128 4500084 . + 0 ID=cds-WP_004222432.1;Parent=gene-LI478_RS21785;Dbxref=Genbank:WP_004222432.1;Name=WP_004222432.1;gbkey=CDS;gene=yjiA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224920.1;locus_tag=LI478_RS21785;product=GTPase;protein_id=WP_004222432.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4500476 4501021 . + . ID=gene-LI478_RS21790;Name=LI478_RS21790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS21790 NZ_CP085478.1 Protein Homology CDS 4500476 4501021 . + 0 ID=cds-WP_023285791.1;Parent=gene-LI478_RS21790;Dbxref=Genbank:WP_023285791.1;Name=WP_023285791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224919.1;locus_tag=LI478_RS21790;product=YfaZ family outer membrane protein;protein_id=WP_023285791.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4501119 4502489 . - . ID=gene-LI478_RS21795;Name=LI478_RS21795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS21795 NZ_CP085478.1 Protein Homology CDS 4501119 4502489 . - 0 ID=cds-WP_004146105.1;Parent=gene-LI478_RS21795;Dbxref=Genbank:WP_004146105.1;Name=WP_004146105.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224918.1;locus_tag=LI478_RS21795;product=NAD-dependent succinate-semialdehyde dehydrogenase;protein_id=WP_004146105.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4502648 4503586 . - . ID=gene-LI478_RS21800;Name=LI478_RS21800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS21800 NZ_CP085478.1 Protein Homology CDS 4502648 4503586 . - 0 ID=cds-WP_021313605.1;Parent=gene-LI478_RS21800;Dbxref=Genbank:WP_021313605.1;Name=WP_021313605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224917.1;locus_tag=LI478_RS21800;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WP_021313605.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4503802 4504617 . + . ID=gene-LI478_RS21805;Name=LI478_RS21805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS21805 NZ_CP085478.1 Protein Homology CDS 4503802 4504617 . + 0 ID=cds-WP_021313606.1;Parent=gene-LI478_RS21805;Dbxref=Genbank:WP_021313606.1;Name=WP_021313606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224916.1;locus_tag=LI478_RS21805;product=AraC family ligand binding domain-containing protein;protein_id=WP_021313606.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4504665 4505327 . + . ID=gene-LI478_RS21810;Name=LI478_RS21810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS21810 NZ_CP085478.1 Protein Homology CDS 4504665 4505327 . + 0 ID=cds-WP_020805198.1;Parent=gene-LI478_RS21810;Dbxref=Genbank:WP_020805198.1;Name=WP_020805198.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224915.1;locus_tag=LI478_RS21810;product=LysE family translocator;protein_id=WP_020805198.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4505320 4506612 . + . ID=gene-LI478_RS21815;Name=LI478_RS21815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS21815 NZ_CP085478.1 Protein Homology CDS 4505320 4506612 . + 0 ID=cds-WP_019724788.1;Parent=gene-LI478_RS21815;Dbxref=Genbank:WP_019724788.1;Name=WP_019724788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224914.1;locus_tag=LI478_RS21815;product=DUF445 domain-containing protein;protein_id=WP_019724788.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4506666 4507907 . + . ID=gene-LI478_RS21820;Name=mdtM;gbkey=Gene;gene=mdtM;gene_biotype=protein_coding;locus_tag=LI478_RS21820 NZ_CP085478.1 Protein Homology CDS 4506666 4507907 . + 0 ID=cds-WP_021313607.1;Parent=gene-LI478_RS21820;Dbxref=Genbank:WP_021313607.1;Name=WP_021313607.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mdtM;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224913.1;locus_tag=LI478_RS21820;product=multidrug efflux MFS transporter MdtM;protein_id=WP_021313607.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4507933 4508172 . + . ID=gene-LI478_RS21825;Name=LI478_RS21825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS21825 NZ_CP085478.1 Protein Homology CDS 4507933 4508172 . + 0 ID=cds-WP_002887416.1;Parent=gene-LI478_RS21825;Dbxref=Genbank:WP_002887416.1;Name=WP_002887416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224912.1;locus_tag=LI478_RS21825;product=DUF2164 domain-containing protein;protein_id=WP_002887416.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4508270 4509421 . + . ID=gene-LI478_RS21830;Name=LI478_RS21830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS21830 NZ_CP085478.1 Protein Homology CDS 4508270 4509421 . + 0 ID=cds-WP_021313608.1;Parent=gene-LI478_RS21830;Dbxref=Genbank:WP_021313608.1;Name=WP_021313608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224911.1;locus_tag=LI478_RS21830;product=double-cubane-cluster-containing anaerobic reductase;protein_id=WP_021313608.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4509431 4510198 . + . ID=gene-LI478_RS21835;Name=yjiL;gbkey=Gene;gene=yjiL;gene_biotype=protein_coding;locus_tag=LI478_RS21835 NZ_CP085478.1 Protein Homology CDS 4509431 4510198 . + 0 ID=cds-WP_023313907.1;Parent=gene-LI478_RS21835;Dbxref=Genbank:WP_023313907.1;Name=WP_023313907.1;Note=YjiL%2C as found in Escherichia coli%2C is a homolog of the activator ATPases of enzymes such as lactoyl-CoA dehydratase%2C (R)-phenyllactate dehydratase%2C and 2-hydroxyisocaproyl-CoA dehydratase. The typical substrate of those enzymes is acyl-CoA with an OH at the beta-position. YjiL is the putative activator for the cognate protein YjiM%2C a putative 2-hydroxyacyl-CoA dehydratase with unknown specificity%2C encoded by the adjacent gene.;gbkey=CDS;gene=yjiL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224910.1;locus_tag=LI478_RS21835;product=putative 2-hydroxyacyl-CoA dehydratase activator YjiL;protein_id=WP_023313907.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4510195 4510449 . + . ID=gene-LI478_RS21840;Name=LI478_RS21840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS21840 NZ_CP085478.1 Protein Homology CDS 4510195 4510449 . + 0 ID=cds-WP_004177546.1;Parent=gene-LI478_RS21840;Dbxref=Genbank:WP_004177546.1;Name=WP_004177546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224909.1;locus_tag=LI478_RS21840;product=DUF3343 domain-containing protein;protein_id=WP_004177546.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4510446 4511510 . - . ID=gene-LI478_RS21845;Name=LI478_RS21845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS21845 NZ_CP085478.1 Protein Homology CDS 4510446 4511510 . - 0 ID=cds-WP_002887411.1;Parent=gene-LI478_RS21845;Dbxref=Genbank:WP_002887411.1;Name=WP_002887411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224908.1;locus_tag=LI478_RS21845;product=DUF2955 domain-containing protein;protein_id=WP_002887411.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4511500 4512567 . - . ID=gene-LI478_RS21850;Name=LI478_RS21850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS21850 NZ_CP085478.1 Protein Homology CDS 4511500 4512567 . - 0 ID=cds-WP_002887394.1;Parent=gene-LI478_RS21850;Dbxref=Genbank:WP_002887394.1;Name=WP_002887394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224907.1;locus_tag=LI478_RS21850;product=HlyD family secretion protein;protein_id=WP_002887394.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4512574 4513038 . - . ID=gene-LI478_RS21855;Name=LI478_RS21855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS21855 NZ_CP085478.1 Protein Homology CDS 4512574 4513038 . - 0 ID=cds-WP_004177547.1;Parent=gene-LI478_RS21855;Dbxref=Genbank:WP_004177547.1;Name=WP_004177547.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224906.1;locus_tag=LI478_RS21855;product=MarR family transcriptional regulator;protein_id=WP_004177547.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4513203 4513367 . - . ID=gene-LI478_RS21860;Name=LI478_RS21860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS21860 NZ_CP085478.1 Protein Homology CDS 4513203 4513367 . - 0 ID=cds-WP_002887388.1;Parent=gene-LI478_RS21860;Dbxref=Genbank:WP_002887388.1;Name=WP_002887388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224905.1;locus_tag=LI478_RS21860;product=DUF1127 domain-containing protein;protein_id=WP_002887388.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4513545 4514957 . + . ID=gene-LI478_RS21865;Name=LI478_RS21865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS21865 NZ_CP085478.1 Protein Homology CDS 4513545 4514957 . + 0 ID=cds-WP_002887384.1;Parent=gene-LI478_RS21865;Dbxref=Genbank:WP_002887384.1;Name=WP_002887384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224904.1;locus_tag=LI478_RS21865;product=PLP-dependent aminotransferase family protein;protein_id=WP_002887384.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4515029 4515448 . - . ID=gene-LI478_RS21870;Name=fosA;gbkey=Gene;gene=fosA;gene_biotype=protein_coding;locus_tag=LI478_RS21870 NZ_CP085478.1 Protein Homology CDS 4515029 4515448 . - 0 ID=cds-WP_004146118.1;Parent=gene-LI478_RS21870;Dbxref=Genbank:WP_004146118.1;Name=WP_004146118.1;gbkey=CDS;gene=fosA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012579083.1;locus_tag=LI478_RS21870;product=FosA5 family fosfomycin resistance glutathione transferase;protein_id=WP_004146118.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4515442 4516350 . - . ID=gene-LI478_RS21875;Name=LI478_RS21875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS21875 NZ_CP085478.1 Protein Homology CDS 4515442 4516350 . - 0 ID=cds-WP_021313611.1;Parent=gene-LI478_RS21875;Dbxref=Genbank:WP_021313611.1;Name=WP_021313611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224902.1;locus_tag=LI478_RS21875;product=LysR family transcriptional regulator;protein_id=WP_021313611.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4516437 4517219 . + . ID=gene-LI478_RS21880;Name=LI478_RS21880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS21880 NZ_CP085478.1 Protein Homology CDS 4516437 4517219 . + 0 ID=cds-WP_002887354.1;Parent=gene-LI478_RS21880;Dbxref=Genbank:WP_002887354.1;Name=WP_002887354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224901.1;locus_tag=LI478_RS21880;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_002887354.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4517256 4518212 . - . ID=gene-LI478_RS21885;Name=LI478_RS21885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS21885 NZ_CP085478.1 Protein Homology CDS 4517256 4518212 . - 0 ID=cds-WP_002887352.1;Parent=gene-LI478_RS21885;Dbxref=Genbank:WP_002887352.1;Name=WP_002887352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224900.1;locus_tag=LI478_RS21885;product=ABC transporter permease;protein_id=WP_002887352.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4518209 4519180 . - . ID=gene-LI478_RS21890;Name=LI478_RS21890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS21890 NZ_CP085478.1 Protein Homology CDS 4518209 4519180 . - 0 ID=cds-WP_004146909.1;Parent=gene-LI478_RS21890;Dbxref=Genbank:WP_004146909.1;Name=WP_004146909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224899.1;locus_tag=LI478_RS21890;product=ABC transporter permease;protein_id=WP_004146909.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4519173 4520657 . - . ID=gene-LI478_RS21895;Name=LI478_RS21895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS21895 NZ_CP085478.1 Protein Homology CDS 4519173 4520657 . - 0 ID=cds-WP_016946160.1;Parent=gene-LI478_RS21895;Dbxref=Genbank:WP_016946160.1;Name=WP_016946160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224898.1;locus_tag=LI478_RS21895;product=sugar ABC transporter ATP-binding protein;protein_id=WP_016946160.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4520708 4521691 . - . ID=gene-LI478_RS21900;Name=LI478_RS21900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS21900 NZ_CP085478.1 Protein Homology CDS 4520708 4521691 . - 0 ID=cds-WP_002887349.1;Parent=gene-LI478_RS21900;Dbxref=Genbank:WP_002887349.1;Name=WP_002887349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224897.1;locus_tag=LI478_RS21900;product=autoinducer 2 ABC transporter substrate-binding protein;protein_id=WP_002887349.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4522196 4523203 . + . ID=gene-LI478_RS21905;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=LI478_RS21905 NZ_CP085478.1 Protein Homology CDS 4522196 4523203 . + 0 ID=cds-WP_064153137.1;Parent=gene-LI478_RS21905;Dbxref=Genbank:WP_064153137.1;Name=WP_064153137.1;Ontology_term=GO:0006436,GO:0004830,GO:0005737;gbkey=CDS;gene=trpS;go_component=cytoplasm|0005737||IEA;go_function=tryptophan-tRNA ligase activity|0004830||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224896.1;locus_tag=LI478_RS21905;product=tryptophan--tRNA ligase;protein_id=WP_064153137.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4523510 4524577 . + . ID=gene-LI478_RS21910;Name=LI478_RS21910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS21910 NZ_CP085478.1 Protein Homology CDS 4523510 4524577 . + 0 ID=cds-WP_004178470.1;Parent=gene-LI478_RS21910;Dbxref=Genbank:WP_004178470.1;Name=WP_004178470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224895.1;locus_tag=LI478_RS21910;product=HlyD family efflux transporter periplasmic adaptor subunit;protein_id=WP_004178470.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4524574 4527318 . + . ID=gene-LI478_RS21915;Name=rbbA;gbkey=Gene;gene=rbbA;gene_biotype=protein_coding;locus_tag=LI478_RS21915 NZ_CP085478.1 Protein Homology CDS 4524574 4527318 . + 0 ID=cds-WP_102007264.1;Parent=gene-LI478_RS21915;Dbxref=Genbank:WP_102007264.1;Name=WP_102007264.1;Ontology_term=GO:0055085,GO:0005524,GO:0042626,GO:0016020,GO:0043190;gbkey=CDS;gene=rbbA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224894.1;locus_tag=LI478_RS21915;product=ribosome-associated ATPase/putative transporter RbbA;protein_id=WP_102007264.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4527318 4528442 . + . ID=gene-LI478_RS21920;Name=LI478_RS21920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS21920 NZ_CP085478.1 Protein Homology CDS 4527318 4528442 . + 0 ID=cds-WP_058343189.1;Parent=gene-LI478_RS21920;Dbxref=Genbank:WP_058343189.1;Name=WP_058343189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224893.1;locus_tag=LI478_RS21920;product=ABC transporter permease;protein_id=WP_058343189.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4528483 4528800 . - . ID=gene-LI478_RS21925;Name=LI478_RS21925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS21925 NZ_CP085478.1 Protein Homology CDS 4528483 4528800 . - 0 ID=cds-WP_002887322.1;Parent=gene-LI478_RS21925;Dbxref=Genbank:WP_002887322.1;Name=WP_002887322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224892.1;locus_tag=LI478_RS21925;product=hypothetical protein;protein_id=WP_002887322.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4529569 4529684 . - . ID=gene-LI478_RS21930;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=LI478_RS21930 NZ_CP085478.1 cmsearch rRNA 4529569 4529684 . - . ID=rna-LI478_RS21930;Parent=gene-LI478_RS21930;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LI478_RS21930;product=5S ribosomal RNA NZ_CP085478.1 cmsearch exon 4529569 4529684 . - . ID=exon-LI478_RS21930-1;Parent=rna-LI478_RS21930;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LI478_RS21930;product=5S ribosomal RNA NZ_CP085478.1 RefSeq gene 4529781 4532682 . - . ID=gene-LI478_RS21935;Name=LI478_RS21935;gbkey=Gene;gene_biotype=rRNA;locus_tag=LI478_RS21935 NZ_CP085478.1 cmsearch rRNA 4529781 4532682 . - . ID=rna-LI478_RS21935;Parent=gene-LI478_RS21935;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LI478_RS21935;product=23S ribosomal RNA NZ_CP085478.1 cmsearch exon 4529781 4532682 . - . ID=exon-LI478_RS21935-1;Parent=rna-LI478_RS21935;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LI478_RS21935;product=23S ribosomal RNA NZ_CP085478.1 RefSeq gene 4532865 4532940 . - . ID=gene-LI478_RS21940;Name=LI478_RS21940;gbkey=Gene;gene_biotype=tRNA;locus_tag=LI478_RS21940 NZ_CP085478.1 tRNAscan-SE tRNA 4532865 4532940 . - . ID=rna-LI478_RS21940;Parent=gene-LI478_RS21940;anticodon=(pos:complement(4532904..4532906));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS21940;product=tRNA-Glu NZ_CP085478.1 tRNAscan-SE exon 4532865 4532940 . - . ID=exon-LI478_RS21940-1;Parent=rna-LI478_RS21940;anticodon=(pos:complement(4532904..4532906));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS21940;product=tRNA-Glu NZ_CP085478.1 RefSeq gene 4533026 4534565 . - . ID=gene-LI478_RS21945;Name=LI478_RS21945;gbkey=Gene;gene_biotype=rRNA;locus_tag=LI478_RS21945 NZ_CP085478.1 cmsearch rRNA 4533026 4534565 . - . ID=rna-LI478_RS21945;Parent=gene-LI478_RS21945;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LI478_RS21945;product=16S ribosomal RNA NZ_CP085478.1 cmsearch exon 4533026 4534565 . - . ID=exon-LI478_RS21945-1;Parent=rna-LI478_RS21945;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LI478_RS21945;product=16S ribosomal RNA NZ_CP085478.1 RefSeq gene 4535157 4536278 . + . ID=gene-LI478_RS21950;Name=LI478_RS21950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS21950 NZ_CP085478.1 Protein Homology CDS 4535157 4536278 . + 0 ID=cds-WP_064153030.1;Parent=gene-LI478_RS21950;Dbxref=Genbank:WP_064153030.1;Name=WP_064153030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224890.1;locus_tag=LI478_RS21950;product=cupin domain-containing protein;protein_id=WP_064153030.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4536326 4536859 . - . ID=gene-LI478_RS21955;Name=kacT;gbkey=Gene;gene=kacT;gene_biotype=protein_coding;locus_tag=LI478_RS21955 NZ_CP085478.1 Protein Homology CDS 4536326 4536859 . - 0 ID=cds-WP_004178461.1;Parent=gene-LI478_RS21955;Dbxref=Genbank:WP_004178461.1;Name=WP_004178461.1;gbkey=CDS;gene=kacT;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224889.1;locus_tag=LI478_RS21955;product=type II toxin-antitoxin system toxin KacT;protein_id=WP_004178461.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4536870 4537136 . - . ID=gene-LI478_RS21960;Name=kacA;gbkey=Gene;gene=kacA;gene_biotype=protein_coding;locus_tag=LI478_RS21960 NZ_CP085478.1 Protein Homology CDS 4536870 4537136 . - 0 ID=cds-WP_002887278.1;Parent=gene-LI478_RS21960;Dbxref=Genbank:WP_002887278.1;Name=WP_002887278.1;gbkey=CDS;gene=kacA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224888.1;locus_tag=LI478_RS21960;product=type II toxin-antitoxin system antitoxin KacA;protein_id=WP_002887278.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4537239 4538672 . - . ID=gene-LI478_RS21965;Name=LI478_RS21965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS21965 NZ_CP085478.1 Protein Homology CDS 4537239 4538672 . - 0 ID=cds-WP_009484674.1;Parent=gene-LI478_RS21965;Dbxref=Genbank:WP_009484674.1;Name=WP_009484674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224887.1;locus_tag=LI478_RS21965;product=Cu(+)/Ag(+) sensor histidine kinase;protein_id=WP_009484674.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4538662 4539345 . - . ID=gene-LI478_RS21970;Name=cusR;gbkey=Gene;gene=cusR;gene_biotype=protein_coding;locus_tag=LI478_RS21970 NZ_CP085478.1 Protein Homology CDS 4538662 4539345 . - 0 ID=cds-WP_004214143.1;Parent=gene-LI478_RS21970;Dbxref=Genbank:WP_004214143.1;Name=WP_004214143.1;gbkey=CDS;gene=cusR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224886.1;locus_tag=LI478_RS21970;product=copper response regulator transcription factor CusR;protein_id=WP_004214143.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4539518 4540903 . + . ID=gene-LI478_RS21975;Name=LI478_RS21975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS21975 NZ_CP085478.1 Protein Homology CDS 4539518 4540903 . + 0 ID=cds-WP_064153031.1;Parent=gene-LI478_RS21975;Dbxref=Genbank:WP_064153031.1;Name=WP_064153031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224884.1;locus_tag=LI478_RS21975;product=efflux transporter outer membrane subunit;protein_id=WP_064153031.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4540921 4541265 . + . ID=gene-LI478_RS21980;Name=cusF;gbkey=Gene;gene=cusF;gene_biotype=protein_coding;locus_tag=LI478_RS21980 NZ_CP085478.1 Protein Homology CDS 4540921 4541265 . + 0 ID=cds-WP_048266266.1;Parent=gene-LI478_RS21980;Dbxref=Genbank:WP_048266266.1;Name=WP_048266266.1;gbkey=CDS;gene=cusF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224883.1;locus_tag=LI478_RS21980;product=cation efflux system protein CusF;protein_id=WP_048266266.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4541310 4542572 . + . ID=gene-LI478_RS21985;Name=LI478_RS21985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS21985 NZ_CP085478.1 Protein Homology CDS 4541310 4542572 . + 0 ID=cds-WP_064153032.1;Parent=gene-LI478_RS21985;Dbxref=Genbank:WP_064153032.1;Name=WP_064153032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224882.1;locus_tag=LI478_RS21985;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_064153032.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4542584 4545733 . + . ID=gene-LI478_RS21990;Name=LI478_RS21990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS21990 NZ_CP085478.1 Protein Homology CDS 4542584 4545733 . + 0 ID=cds-WP_064153033.1;Parent=gene-LI478_RS21990;Dbxref=Genbank:WP_064153033.1;Name=WP_064153033.1;Ontology_term=GO:0051139,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metal cation:proton antiporter activity|0051139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224881.1;locus_tag=LI478_RS21990;product=CusA/CzcA family heavy metal efflux RND transporter;protein_id=WP_064153033.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4545806 4546153 . + . ID=gene-LI478_RS21995;Name=LI478_RS21995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS21995 NZ_CP085478.1 Protein Homology CDS 4545806 4546153 . + 0 ID=cds-WP_004177568.1;Parent=gene-LI478_RS21995;Dbxref=Genbank:WP_004177568.1;Name=WP_004177568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224880.1;locus_tag=LI478_RS21995;product=DUF1294 domain-containing protein;protein_id=WP_004177568.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4546163 4546696 . - . ID=gene-LI478_RS22000;Name=LI478_RS22000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS22000 NZ_CP085478.1 Protein Homology CDS 4546163 4546696 . - 0 ID=cds-WP_064153034.1;Parent=gene-LI478_RS22000;Dbxref=Genbank:WP_064153034.1;Name=WP_064153034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224879.1;locus_tag=LI478_RS22000;product=lipocalin family protein;protein_id=WP_064153034.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4546813 4547541 . + . ID=gene-LI478_RS22005;Name=LI478_RS22005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS22005 NZ_CP085478.1 Protein Homology CDS 4546813 4547541 . + 0 ID=cds-WP_004192228.1;Parent=gene-LI478_RS22005;Dbxref=Genbank:WP_004192228.1;Name=WP_004192228.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224878.1;locus_tag=LI478_RS22005;product=MerR family transcriptional regulator;protein_id=WP_004192228.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4547774 4548208 . + . ID=gene-LI478_RS22010;Name=LI478_RS22010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS22010 NZ_CP085478.1 Protein Homology CDS 4547774 4548208 . + 0 ID=cds-WP_064153035.1;Parent=gene-LI478_RS22010;Dbxref=Genbank:WP_064153035.1;Name=WP_064153035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224877.1;locus_tag=LI478_RS22010;product=nuclear transport factor 2 family protein;protein_id=WP_064153035.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4548205 4548924 . + . ID=gene-LI478_RS22015;Name=LI478_RS22015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS22015 NZ_CP085478.1 Protein Homology CDS 4548205 4548924 . + 0 ID=cds-WP_004872509.1;Parent=gene-LI478_RS22015;Dbxref=Genbank:WP_004872509.1;Name=WP_004872509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224876.1;locus_tag=LI478_RS22015;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_004872509.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4548921 4550180 . + . ID=gene-LI478_RS22020;Name=LI478_RS22020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS22020 NZ_CP085478.1 Protein Homology CDS 4548921 4550180 . + 0 ID=cds-WP_064153036.1;Parent=gene-LI478_RS22020;Dbxref=Genbank:WP_064153036.1;Name=WP_064153036.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016160203.1;locus_tag=LI478_RS22020;product=FAD-dependent oxidoreductase;protein_id=WP_064153036.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4550182 4550904 . + . ID=gene-LI478_RS22025;Name=LI478_RS22025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS22025 NZ_CP085478.1 Protein Homology CDS 4550182 4550904 . + 0 ID=cds-WP_048337338.1;Parent=gene-LI478_RS22025;Dbxref=Genbank:WP_048337338.1;Name=WP_048337338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224874.1;locus_tag=LI478_RS22025;product=DUF1365 domain-containing protein;protein_id=WP_048337338.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4550901 4552121 . + . ID=gene-LI478_RS22030;Name=LI478_RS22030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS22030 NZ_CP085478.1 Protein Homology CDS 4550901 4552121 . + 0 ID=cds-WP_064153037.1;Parent=gene-LI478_RS22030;Dbxref=Genbank:WP_064153037.1;Name=WP_064153037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224873.1;locus_tag=LI478_RS22030;product=cyclopropane-fatty-acyl-phospholipid synthase family protein;protein_id=WP_064153037.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4552118 4552603 . + . ID=gene-LI478_RS22035;Name=LI478_RS22035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS22035 NZ_CP085478.1 Protein Homology CDS 4552118 4552603 . + 0 ID=cds-WP_024623213.1;Parent=gene-LI478_RS22035;Dbxref=Genbank:WP_024623213.1;Name=WP_024623213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224872.1;locus_tag=LI478_RS22035;product=DUF2878 domain-containing protein;protein_id=WP_024623213.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4552600 4553124 . + . ID=gene-LI478_RS22040;Name=LI478_RS22040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS22040 NZ_CP085478.1 Protein Homology CDS 4552600 4553124 . + 0 ID=cds-WP_064153038.1;Parent=gene-LI478_RS22040;Dbxref=Genbank:WP_064153038.1;Name=WP_064153038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224871.1;locus_tag=LI478_RS22040;product=hypothetical protein;protein_id=WP_064153038.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4553121 4553672 . + . ID=gene-LI478_RS22045;Name=LI478_RS22045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS22045 NZ_CP085478.1 Protein Homology CDS 4553121 4553672 . + 0 ID=cds-WP_064153039.1;Parent=gene-LI478_RS22045;Dbxref=Genbank:WP_064153039.1;Name=WP_064153039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224870.1;locus_tag=LI478_RS22045;product=DUF3833 domain-containing protein;protein_id=WP_064153039.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4553669 4554628 . + . ID=gene-LI478_RS22050;Name=LI478_RS22050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS22050 NZ_CP085478.1 Protein Homology CDS 4553669 4554628 . + 0 ID=cds-WP_064153040.1;Parent=gene-LI478_RS22050;Dbxref=Genbank:WP_064153040.1;Name=WP_064153040.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015959355.1;locus_tag=LI478_RS22050;product=DUF523 and DUF1722 domain-containing protein;protein_id=WP_064153040.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4555038 4556420 . - . ID=gene-LI478_RS22055;Name=LI478_RS22055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS22055 NZ_CP085478.1 Protein Homology CDS 4555038 4556420 . - 0 ID=cds-WP_004146875.1;Parent=gene-LI478_RS22055;Dbxref=Genbank:WP_004146875.1;Name=WP_004146875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224868.1;locus_tag=LI478_RS22055;product=carbohydrate porin;protein_id=WP_004146875.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4556692 4558011 . - . ID=gene-LI478_RS22060;Name=xylA;gbkey=Gene;gene=xylA;gene_biotype=protein_coding;locus_tag=LI478_RS22060 NZ_CP085478.1 Protein Homology CDS 4556692 4558011 . - 0 ID=cds-WP_004192243.1;Parent=gene-LI478_RS22060;Dbxref=Genbank:WP_004192243.1;Name=WP_004192243.1;Ontology_term=GO:0006098,GO:0042732,GO:0000287,GO:0009045;gbkey=CDS;gene=xylA;go_function=magnesium ion binding|0000287||IEA,xylose isomerase activity|0009045||IEA;go_process=pentose-phosphate shunt|0006098||IEA,D-xylose metabolic process|0042732||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224866.1;locus_tag=LI478_RS22060;product=xylose isomerase;protein_id=WP_004192243.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4558438 4559877 . + . ID=gene-LI478_RS22065;Name=LI478_RS22065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS22065 NZ_CP085478.1 Protein Homology CDS 4558438 4559877 . + 0 ID=cds-WP_004153321.1;Parent=gene-LI478_RS22065;Dbxref=Genbank:WP_004153321.1;Name=WP_004153321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224865.1;locus_tag=LI478_RS22065;product=MFS transporter;protein_id=WP_004153321.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4559936 4561615 . + . ID=gene-LI478_RS22070;Name=LI478_RS22070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS22070 NZ_CP085478.1 Protein Homology CDS 4559936 4561615 . + 0 ID=cds-WP_102007320.1;Parent=gene-LI478_RS22070;Dbxref=Genbank:WP_102007320.1;Name=WP_102007320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224864.1;locus_tag=LI478_RS22070;product=glycoside hydrolase family 43 protein;protein_id=WP_102007320.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4561698 4562336 . - . ID=gene-LI478_RS22075;Name=LI478_RS22075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS22075 NZ_CP085478.1 Protein Homology CDS 4561698 4562336 . - 0 ID=cds-WP_004192249.1;Parent=gene-LI478_RS22075;Dbxref=Genbank:WP_004192249.1;Name=WP_004192249.1;Ontology_term=GO:0003676,GO:0004519;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224863.1;locus_tag=LI478_RS22075;product=HNH endonuclease;protein_id=WP_004192249.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4562516 4563385 . + . ID=gene-LI478_RS22080;Name=LI478_RS22080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS22080 NZ_CP085478.1 Protein Homology CDS 4562516 4563385 . + 0 ID=cds-WP_042936901.1;Parent=gene-LI478_RS22080;Dbxref=Genbank:WP_042936901.1;Name=WP_042936901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224862.1;locus_tag=LI478_RS22080;product=HNH endonuclease;protein_id=WP_042936901.1;transl_table=11 NZ_CP085478.1 RefSeq pseudogene 4563408 4563500 . - . ID=gene-LI478_RS22085;Name=LI478_RS22085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS22085;partial=true;pseudo=true;start_range=.,4563408 NZ_CP085478.1 Protein Homology CDS 4563408 4563500 . - 0 ID=cds-LI478_RS22085;Parent=gene-LI478_RS22085;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226602.1;locus_tag=LI478_RS22085;partial=true;product=type VI secretion system tube protein Hcp;pseudo=true;start_range=.,4563408;transl_table=11 NZ_CP085478.1 RefSeq gene 4563502 4563768 . - . ID=gene-LI478_RS22090;Name=LI478_RS22090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS22090 NZ_CP085478.1 Protein Homology CDS 4563502 4563768 . - 0 ID=cds-WP_021464737.1;Parent=gene-LI478_RS22090;Dbxref=Genbank:WP_021464737.1;Name=WP_021464737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016946727.1;locus_tag=LI478_RS22090;product=hypothetical protein;protein_id=WP_021464737.1;transl_table=11 NZ_CP085478.1 RefSeq pseudogene 4563743 4564024 . - . ID=gene-LI478_RS22095;Name=LI478_RS22095;end_range=4564024,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS22095;partial=true;pseudo=true NZ_CP085478.1 Protein Homology CDS 4563743 4564024 . - 0 ID=cds-LI478_RS22095;Parent=gene-LI478_RS22095;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=4564024,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012969062.1;locus_tag=LI478_RS22095;partial=true;product=DUF2778 domain-containing protein;pseudo=true;transl_table=11 NZ_CP085478.1 RefSeq gene 4564469 4565143 . + . ID=gene-LI478_RS22100;Name=LI478_RS22100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS22100 NZ_CP085478.1 Protein Homology CDS 4564469 4565143 . + 0 ID=cds-WP_064153726.1;Parent=gene-LI478_RS22100;Dbxref=Genbank:WP_064153726.1;Name=WP_064153726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224860.1;locus_tag=LI478_RS22100;product=hypothetical protein;protein_id=WP_064153726.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4565145 4565492 . + . ID=gene-LI478_RS22105;Name=LI478_RS22105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS22105 NZ_CP085478.1 Protein Homology CDS 4565145 4565492 . + 0 ID=cds-WP_032425515.1;Parent=gene-LI478_RS22105;Dbxref=Genbank:WP_032425515.1;Name=WP_032425515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224859.1;locus_tag=LI478_RS22105;product=hypothetical protein;protein_id=WP_032425515.1;transl_table=11 NZ_CP085478.1 RefSeq pseudogene 4565495 4565590 . + . ID=gene-LI478_RS22110;Name=LI478_RS22110;end_range=4565590,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS22110;partial=true;pseudo=true NZ_CP085478.1 Protein Homology CDS 4565495 4565590 . + 0 ID=cds-LI478_RS22110;Parent=gene-LI478_RS22110;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=4565590,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002887049.1;locus_tag=LI478_RS22110;partial=true;product=type VI secretion system tube protein Hcp;pseudo=true;transl_table=11 NZ_CP085478.1 RefSeq pseudogene 4565613 4566521 . - . ID=gene-LI478_RS22115;Name=LI478_RS22115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS22115;pseudo=true NZ_CP085478.1 Protein Homology CDS 4565613 4566521 . - 0 ID=cds-LI478_RS22115;Parent=gene-LI478_RS22115;Note=frameshifted%3B internal stop;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558253.1;locus_tag=LI478_RS22115;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP085478.1 RefSeq gene 4566666 4567907 . - . ID=gene-LI478_RS22120;Name=LI478_RS22120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS22120 NZ_CP085478.1 Protein Homology CDS 4566666 4567907 . - 0 ID=cds-WP_004186803.1;Parent=gene-LI478_RS22120;Dbxref=Genbank:WP_004186803.1;Name=WP_004186803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001043705.1;locus_tag=LI478_RS22120;product=hypothetical protein;protein_id=WP_004186803.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4568438 4568974 . + . ID=gene-LI478_RS22125;Name=LI478_RS22125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS22125 NZ_CP085478.1 GeneMarkS-2+ CDS 4568438 4568974 . + 0 ID=cds-WP_223364940.1;Parent=gene-LI478_RS22125;Dbxref=Genbank:WP_223364940.1;Name=WP_223364940.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LI478_RS22125;product=HNH endonuclease;protein_id=WP_223364940.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4569179 4570312 . + . ID=gene-LI478_RS22130;Name=LI478_RS22130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS22130 NZ_CP085478.1 Protein Homology CDS 4569179 4570312 . + 0 ID=cds-WP_064153725.1;Parent=gene-LI478_RS22130;Dbxref=Genbank:WP_064153725.1;Name=WP_064153725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004186798.1;locus_tag=LI478_RS22130;product=HNH endonuclease signature motif containing protein;protein_id=WP_064153725.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4570323 4570829 . + . ID=gene-LI478_RS22135;Name=LI478_RS22135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS22135 NZ_CP085478.1 Protein Homology CDS 4570323 4570829 . + 0 ID=cds-WP_032413281.1;Parent=gene-LI478_RS22135;Dbxref=Genbank:WP_032413281.1;Name=WP_032413281.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019704403.1;locus_tag=LI478_RS22135;product=YrhA family protein;protein_id=WP_032413281.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4571045 4571647 . + . ID=gene-LI478_RS22140;Name=LI478_RS22140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS22140 NZ_CP085478.1 Protein Homology CDS 4571045 4571647 . + 0 ID=cds-WP_101983975.1;Parent=gene-LI478_RS22140;Dbxref=Genbank:WP_101983975.1;Name=WP_101983975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463357.1;locus_tag=LI478_RS22140;product=DUF1819 family protein;protein_id=WP_101983975.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4571644 4572246 . + . ID=gene-LI478_RS22145;Name=LI478_RS22145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS22145 NZ_CP085478.1 Protein Homology CDS 4571644 4572246 . + 0 ID=cds-WP_032425512.1;Parent=gene-LI478_RS22145;Dbxref=Genbank:WP_032425512.1;Name=WP_032425512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463356.1;locus_tag=LI478_RS22145;product=DUF1788 domain-containing protein;protein_id=WP_032425512.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4572258 4575899 . + . ID=gene-LI478_RS22150;Name=brxC;gbkey=Gene;gene=brxC;gene_biotype=protein_coding;locus_tag=LI478_RS22150 NZ_CP085478.1 Protein Homology CDS 4572258 4575899 . + 0 ID=cds-WP_064153723.1;Parent=gene-LI478_RS22150;Dbxref=Genbank:WP_064153723.1;Name=WP_064153723.1;gbkey=CDS;gene=brxC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463355.1;locus_tag=LI478_RS22150;product=BREX system P-loop protein BrxC;protein_id=WP_064153723.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4575945 4579613 . + . ID=gene-LI478_RS22155;Name=pglX;gbkey=Gene;gene=pglX;gene_biotype=protein_coding;locus_tag=LI478_RS22155 NZ_CP085478.1 Protein Homology CDS 4575945 4579613 . + 0 ID=cds-WP_064153722.1;Parent=gene-LI478_RS22155;Dbxref=Genbank:WP_064153722.1;Name=WP_064153722.1;Ontology_term=GO:0006306,GO:0003677,GO:0008170;gbkey=CDS;gene=pglX;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;go_process=DNA methylation|0006306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463354.1;locus_tag=LI478_RS22155;product=BREX-1 system adenine-specific DNA-methyltransferase PglX;protein_id=WP_064153722.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4579803 4582400 . + . ID=gene-LI478_RS22160;Name=pglZ;gbkey=Gene;gene=pglZ;gene_biotype=protein_coding;locus_tag=LI478_RS22160 NZ_CP085478.1 Protein Homology CDS 4579803 4582400 . + 0 ID=cds-WP_077266568.1;Parent=gene-LI478_RS22160;Dbxref=Genbank:WP_077266568.1;Name=WP_077266568.1;Ontology_term=GO:0003824;gbkey=CDS;gene=pglZ;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463351.1;locus_tag=LI478_RS22160;product=BREX-1 system phosphatase PglZ type A;protein_id=WP_077266568.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4582411 4584495 . + . ID=gene-LI478_RS22165;Name=brxL;gbkey=Gene;gene=brxL;gene_biotype=protein_coding;locus_tag=LI478_RS22165 NZ_CP085478.1 Protein Homology CDS 4582411 4584495 . + 0 ID=cds-WP_040236935.1;Parent=gene-LI478_RS22165;Dbxref=Genbank:WP_040236935.1;Name=WP_040236935.1;Ontology_term=GO:0008150,GO:0003674,GO:0005575;gbkey=CDS;gene=brxL;go_component=cellular_component|0005575||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463350.1;locus_tag=LI478_RS22165;product=protease Lon-related BREX system protein BrxL;protein_id=WP_040236935.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4584614 4585789 . + . ID=gene-LI478_RS22170;Name=LI478_RS22170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS22170 NZ_CP085478.1 Protein Homology CDS 4584614 4585789 . + 0 ID=cds-WP_227394155.1;Parent=gene-LI478_RS22170;Dbxref=Genbank:WP_227394155.1;Name=WP_227394155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001523588.1;locus_tag=LI478_RS22170;product=phospholipase D-like domain-containing protein;protein_id=WP_227394155.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4585826 4586794 . - . ID=gene-LI478_RS22175;Name=LI478_RS22175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS22175 NZ_CP085478.1 Protein Homology CDS 4585826 4586794 . - 0 ID=cds-WP_004225014.1-9;Parent=gene-LI478_RS22175;Dbxref=Genbank:WP_004225014.1;Name=WP_004225014.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=LI478_RS22175;product=IS5 family transposase;protein_id=WP_004225014.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4586774 4587028 . + . ID=gene-LI478_RS22180;Name=LI478_RS22180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS22180 NZ_CP085478.1 GeneMarkS-2+ CDS 4586774 4587028 . + 0 ID=cds-WP_227394156.1;Parent=gene-LI478_RS22180;Dbxref=Genbank:WP_227394156.1;Name=WP_227394156.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LI478_RS22180;product=hypothetical protein;protein_id=WP_227394156.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4587089 4588078 . - . ID=gene-LI478_RS22185;Name=LI478_RS22185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS22185 NZ_CP085478.1 Protein Homology CDS 4587089 4588078 . - 0 ID=cds-WP_101983933.1;Parent=gene-LI478_RS22185;Dbxref=Genbank:WP_101983933.1;Name=WP_101983933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463349.1;locus_tag=LI478_RS22185;product=restriction endonuclease;protein_id=WP_101983933.1;transl_table=11 NZ_CP085478.1 RefSeq pseudogene 4588175 4589236 . - . ID=gene-LI478_RS22190;Name=LI478_RS22190;end_range=4589236,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS22190;partial=true;pseudo=true NZ_CP085478.1 Protein Homology CDS 4588175 4589236 . - 0 ID=cds-LI478_RS22190;Parent=gene-LI478_RS22190;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=4589236,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463348.1;locus_tag=LI478_RS22190;partial=true;product=AAA domain-containing protein;pseudo=true;transl_table=11 NZ_CP085478.1 RefSeq gene 4589293 4590261 . - . ID=gene-LI478_RS22195;Name=LI478_RS22195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS22195 NZ_CP085478.1 Protein Homology CDS 4589293 4590261 . - 0 ID=cds-WP_004225014.1-10;Parent=gene-LI478_RS22195;Dbxref=Genbank:WP_004225014.1;Name=WP_004225014.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=LI478_RS22195;product=IS5 family transposase;protein_id=WP_004225014.1;transl_table=11 NZ_CP085478.1 RefSeq pseudogene 4590293 4592755 . - . ID=gene-LI478_RS22200;Name=LI478_RS22200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS22200;partial=true;pseudo=true;start_range=.,4590293 NZ_CP085478.1 Protein Homology CDS 4590293 4592755 . - 0 ID=cds-LI478_RS22200;Parent=gene-LI478_RS22200;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004386;gbkey=CDS;go_function=helicase activity|0004386||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463348.1;locus_tag=LI478_RS22200;partial=true;product=AAA domain-containing protein;pseudo=true;start_range=.,4590293;transl_table=11 NZ_CP085478.1 RefSeq gene 4593080 4593457 . - . ID=gene-LI478_RS22205;Name=LI478_RS22205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS22205 NZ_CP085478.1 Protein Homology CDS 4593080 4593457 . - 0 ID=cds-WP_072071988.1;Parent=gene-LI478_RS22205;Dbxref=Genbank:WP_072071988.1;Name=WP_072071988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000784769.1;locus_tag=LI478_RS22205;product=hypothetical protein;protein_id=WP_072071988.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4593526 4594305 . - . ID=gene-LI478_RS22210;Name=LI478_RS22210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS22210 NZ_CP085478.1 Protein Homology CDS 4593526 4594305 . - 0 ID=cds-WP_064153673.1;Parent=gene-LI478_RS22210;Dbxref=Genbank:WP_064153673.1;Name=WP_064153673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012737308.1;locus_tag=LI478_RS22210;product=HNH endonuclease;protein_id=WP_064153673.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4594626 4594710 . - . ID=gene-LI478_RS22215;Name=LI478_RS22215;gbkey=Gene;gene_biotype=tRNA;locus_tag=LI478_RS22215 NZ_CP085478.1 tRNAscan-SE tRNA 4594626 4594710 . - . ID=rna-LI478_RS22215;Parent=gene-LI478_RS22215;anticodon=(pos:complement(4594674..4594676));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS22215;product=tRNA-Leu NZ_CP085478.1 tRNAscan-SE exon 4594626 4594710 . - . ID=exon-LI478_RS22215-1;Parent=rna-LI478_RS22215;anticodon=(pos:complement(4594674..4594676));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS22215;product=tRNA-Leu NZ_CP085478.1 RefSeq gene 4595298 4595978 . + . ID=gene-LI478_RS22220;Name=LI478_RS22220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS22220 NZ_CP085478.1 Protein Homology CDS 4595298 4595978 . + 0 ID=cds-WP_064153670.1;Parent=gene-LI478_RS22220;Dbxref=Genbank:WP_064153670.1;Name=WP_064153670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224839.1;locus_tag=LI478_RS22220;product=carbonic anhydrase;protein_id=WP_064153670.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4595975 4597444 . + . ID=gene-LI478_RS22225;Name=LI478_RS22225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS22225 NZ_CP085478.1 Protein Homology CDS 4595975 4597444 . + 0 ID=cds-WP_064153669.1;Parent=gene-LI478_RS22225;Dbxref=Genbank:WP_064153669.1;Name=WP_064153669.1;Ontology_term=GO:0008272,GO:0015116,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=sulfate transmembrane transporter activity|0015116||IEA;go_process=sulfate transport|0008272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224838.1;locus_tag=LI478_RS22225;product=SulP family inorganic anion transporter;protein_id=WP_064153669.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4597556 4598575 . + . ID=gene-LI478_RS22230;Name=LI478_RS22230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS22230 NZ_CP085478.1 Protein Homology CDS 4597556 4598575 . + 0 ID=cds-WP_021464755.1;Parent=gene-LI478_RS22230;Dbxref=Genbank:WP_021464755.1;Name=WP_021464755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224837.1;locus_tag=LI478_RS22230;product=NAD(P)-dependent alcohol dehydrogenase;protein_id=WP_021464755.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4598706 4599590 . + . ID=gene-LI478_RS22235;Name=LI478_RS22235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS22235 NZ_CP085478.1 Protein Homology CDS 4598706 4599590 . + 0 ID=cds-WP_074185304.1;Parent=gene-LI478_RS22235;Dbxref=Genbank:WP_074185304.1;Name=WP_074185304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224836.1;locus_tag=LI478_RS22235;product=sugar ABC transporter permease;protein_id=WP_074185304.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4599580 4600467 . + . ID=gene-LI478_RS22240;Name=LI478_RS22240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS22240 NZ_CP085478.1 Protein Homology CDS 4599580 4600467 . + 0 ID=cds-WP_064153668.1;Parent=gene-LI478_RS22240;Dbxref=Genbank:WP_064153668.1;Name=WP_064153668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224835.1;locus_tag=LI478_RS22240;product=carbohydrate ABC transporter permease;protein_id=WP_064153668.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4600478 4601302 . + . ID=gene-LI478_RS22245;Name=LI478_RS22245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS22245 NZ_CP085478.1 Protein Homology CDS 4600478 4601302 . + 0 ID=cds-WP_002886979.1;Parent=gene-LI478_RS22245;Dbxref=Genbank:WP_002886979.1;Name=WP_002886979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224834.1;locus_tag=LI478_RS22245;product=phosphodiesterase;protein_id=WP_002886979.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4601308 4602381 . + . ID=gene-LI478_RS22250;Name=LI478_RS22250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS22250 NZ_CP085478.1 Protein Homology CDS 4601308 4602381 . + 0 ID=cds-WP_064153667.1;Parent=gene-LI478_RS22250;Dbxref=Genbank:WP_064153667.1;Name=WP_064153667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224833.1;locus_tag=LI478_RS22250;product=ABC transporter ATP-binding protein;protein_id=WP_064153667.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4602374 4603684 . + . ID=gene-LI478_RS22255;Name=LI478_RS22255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS22255 NZ_CP085478.1 Protein Homology CDS 4602374 4603684 . + 0 ID=cds-WP_032415887.1;Parent=gene-LI478_RS22255;Dbxref=Genbank:WP_032415887.1;Name=WP_032415887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224832.1;locus_tag=LI478_RS22255;product=ABC transporter substrate-binding protein;protein_id=WP_032415887.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4603828 4604727 . - . ID=gene-LI478_RS22260;Name=iolE;gbkey=Gene;gene=iolE;gene_biotype=protein_coding;locus_tag=LI478_RS22260 NZ_CP085478.1 Protein Homology CDS 4603828 4604727 . - 0 ID=cds-WP_002886970.1;Parent=gene-LI478_RS22260;Dbxref=Genbank:WP_002886970.1;Name=WP_002886970.1;Ontology_term=GO:0019310,GO:0050114;gbkey=CDS;gene=iolE;go_function=myo-inosose-2 dehydratase activity|0050114||IEA;go_process=inositol catabolic process|0019310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224831.1;locus_tag=LI478_RS22260;product=myo-inosose-2 dehydratase;protein_id=WP_002886970.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4604751 4605635 . - . ID=gene-LI478_RS22265;Name=LI478_RS22265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS22265 NZ_CP085478.1 Protein Homology CDS 4604751 4605635 . - 0 ID=cds-WP_004152193.1;Parent=gene-LI478_RS22265;Dbxref=Genbank:WP_004152193.1;Name=WP_004152193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224830.1;locus_tag=LI478_RS22265;product=sugar phosphate isomerase/epimerase;protein_id=WP_004152193.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4605677 4606690 . - . ID=gene-LI478_RS22270;Name=LI478_RS22270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS22270 NZ_CP085478.1 Protein Homology CDS 4605677 4606690 . - 0 ID=cds-WP_004152192.1;Parent=gene-LI478_RS22270;Dbxref=Genbank:WP_004152192.1;Name=WP_004152192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224829.1;locus_tag=LI478_RS22270;product=Gfo/Idh/MocA family oxidoreductase;protein_id=WP_004152192.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4606737 4608677 . - . ID=gene-LI478_RS22275;Name=iolD;gbkey=Gene;gene=iolD;gene_biotype=protein_coding;locus_tag=LI478_RS22275 NZ_CP085478.1 Protein Homology CDS 4606737 4608677 . - 0 ID=cds-WP_004186736.1;Parent=gene-LI478_RS22275;Dbxref=Genbank:WP_004186736.1;Name=WP_004186736.1;Ontology_term=GO:0019310,GO:0000287,GO:0016823,GO:0030976;gbkey=CDS;gene=iolD;go_function=magnesium ion binding|0000287||IEA,hydrolase activity%2C acting on acid carbon-carbon bonds%2C in ketonic substances|0016823||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=inositol catabolic process|0019310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224828.1;locus_tag=LI478_RS22275;product=3D-(3%2C5/4)-trihydroxycyclohexane-1%2C2-dione acylhydrolase (decyclizing);protein_id=WP_004186736.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4609183 4611096 . + . ID=gene-LI478_RS22280;Name=iolC;gbkey=Gene;gene=iolC;gene_biotype=protein_coding;locus_tag=LI478_RS22280 NZ_CP085478.1 Protein Homology CDS 4609183 4611096 . + 0 ID=cds-WP_004146797.1;Parent=gene-LI478_RS22280;Dbxref=Genbank:WP_004146797.1;Name=WP_004146797.1;Ontology_term=GO:0019310,GO:0047590;gbkey=CDS;gene=iolC;go_function=5-dehydro-2-deoxygluconokinase activity|0047590||IEA;go_process=inositol catabolic process|0019310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224826.1;locus_tag=LI478_RS22280;product=5-dehydro-2-deoxygluconokinase;protein_id=WP_004146797.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4611248 4612105 . + . ID=gene-LI478_RS22285;Name=LI478_RS22285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS22285 NZ_CP085478.1 Protein Homology CDS 4611248 4612105 . + 0 ID=cds-WP_004152190.1;Parent=gene-LI478_RS22285;Dbxref=Genbank:WP_004152190.1;Name=WP_004152190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224825.1;locus_tag=LI478_RS22285;product=MurR/RpiR family transcriptional regulator;protein_id=WP_004152190.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4613205 4614014 . - . ID=gene-LI478_RS22290;Name=iolB;gbkey=Gene;gene=iolB;gene_biotype=protein_coding;locus_tag=LI478_RS22290 NZ_CP085478.1 Protein Homology CDS 4613205 4614014 . - 0 ID=cds-WP_004177654.1;Parent=gene-LI478_RS22290;Dbxref=Genbank:WP_004177654.1;Name=WP_004177654.1;Ontology_term=GO:0019310,GO:0016861;gbkey=CDS;gene=iolB;go_function=intramolecular oxidoreductase activity%2C interconverting aldoses and ketoses|0016861||IEA;go_process=inositol catabolic process|0019310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224824.1;locus_tag=LI478_RS22290;product=5-deoxy-glucuronate isomerase;protein_id=WP_004177654.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4614033 4615538 . - . ID=gene-LI478_RS22295;Name=LI478_RS22295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS22295 NZ_CP085478.1 Protein Homology CDS 4614033 4615538 . - 0 ID=cds-WP_009486529.1;Parent=gene-LI478_RS22295;Dbxref=Genbank:WP_009486529.1;Name=WP_009486529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224823.1;locus_tag=LI478_RS22295;product=CoA-acylating methylmalonate-semialdehyde dehydrogenase;protein_id=WP_009486529.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4615890 4616711 . + . ID=gene-LI478_RS22300;Name=LI478_RS22300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS22300 NZ_CP085478.1 Protein Homology CDS 4615890 4616711 . + 0 ID=cds-WP_064153666.1;Parent=gene-LI478_RS22300;Dbxref=Genbank:WP_064153666.1;Name=WP_064153666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224822.1;locus_tag=LI478_RS22300;product=TIM barrel protein;protein_id=WP_064153666.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4616810 4618312 . + . ID=gene-LI478_RS22305;Name=LI478_RS22305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS22305 NZ_CP085478.1 Protein Homology CDS 4616810 4618312 . + 0 ID=cds-WP_021464761.1;Parent=gene-LI478_RS22305;Dbxref=Genbank:WP_021464761.1;Name=WP_021464761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224821.1;locus_tag=LI478_RS22305;product=DUF853 domain-containing protein;protein_id=WP_021464761.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4618361 4619443 . - . ID=gene-LI478_RS22310;Name=lptG;gbkey=Gene;gene=lptG;gene_biotype=protein_coding;locus_tag=LI478_RS22310 NZ_CP085478.1 Protein Homology CDS 4618361 4619443 . - 0 ID=cds-WP_002886956.1;Parent=gene-LI478_RS22310;Dbxref=Genbank:WP_002886956.1;Name=WP_002886956.1;Ontology_term=GO:0015920,GO:0015221,GO:0005886;gbkey=CDS;gene=lptG;go_component=plasma membrane|0005886||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224820.1;locus_tag=LI478_RS22310;product=LPS export ABC transporter permease LptG;protein_id=WP_002886956.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4619443 4620540 . - . ID=gene-LI478_RS22315;Name=lptF;gbkey=Gene;gene=lptF;gene_biotype=protein_coding;locus_tag=LI478_RS22315 NZ_CP085478.1 Protein Homology CDS 4619443 4620540 . - 0 ID=cds-WP_002886955.1;Parent=gene-LI478_RS22315;Dbxref=Genbank:WP_002886955.1;Name=WP_002886955.1;Ontology_term=GO:0015920,GO:0015221,GO:0005886;gbkey=CDS;gene=lptF;go_component=plasma membrane|0005886||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224819.1;locus_tag=LI478_RS22315;product=LPS export ABC transporter permease LptF;protein_id=WP_002886955.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4620930 4622441 . + . ID=gene-LI478_RS22320;Name=pepA;gbkey=Gene;gene=pepA;gene_biotype=protein_coding;locus_tag=LI478_RS22320 NZ_CP085478.1 Protein Homology CDS 4620930 4622441 . + 0 ID=cds-WP_002886954.1;Parent=gene-LI478_RS22320;Dbxref=Genbank:WP_002886954.1;Name=WP_002886954.1;Ontology_term=GO:0006508,GO:0019538,GO:0030145,GO:0070006;gbkey=CDS;gene=pepA;go_function=manganese ion binding|0030145||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA,protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224818.1;locus_tag=LI478_RS22320;product=leucyl aminopeptidase;protein_id=WP_002886954.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4622561 4623004 . + . ID=gene-LI478_RS22325;Name=holC;gbkey=Gene;gene=holC;gene_biotype=protein_coding;locus_tag=LI478_RS22325 NZ_CP085478.1 Protein Homology CDS 4622561 4623004 . + 0 ID=cds-WP_002886953.1;Parent=gene-LI478_RS22325;Dbxref=Genbank:WP_002886953.1;Name=WP_002886953.1;gbkey=CDS;gene=holC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004098129.1;locus_tag=LI478_RS22325;product=DNA polymerase III subunit chi;protein_id=WP_002886953.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4623004 4625859 . + . ID=gene-LI478_RS22330;Name=LI478_RS22330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS22330 NZ_CP085478.1 Protein Homology CDS 4623004 4625859 . + 0 ID=cds-WP_002886952.1;Parent=gene-LI478_RS22330;Dbxref=Genbank:WP_002886952.1;Name=WP_002886952.1;Ontology_term=GO:0006438,GO:0000166,GO:0004812,GO:0004832,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,valine-tRNA ligase activity|0004832||IEA,ATP binding|0005524||IEA;go_process=valyl-tRNA aminoacylation|0006438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000416368.1;locus_tag=LI478_RS22330;product=valine--tRNA ligase;protein_id=WP_002886952.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4625980 4626483 . + . ID=gene-LI478_RS22335;Name=LI478_RS22335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS22335 NZ_CP085478.1 Protein Homology CDS 4625980 4626483 . + 0 ID=cds-WP_004222194.1;Parent=gene-LI478_RS22335;Dbxref=Genbank:WP_004222194.1;Name=WP_004222194.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224815.1;locus_tag=LI478_RS22335;product=GNAT family N-acetyltransferase;protein_id=WP_004222194.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4626747 4627511 . - . ID=gene-LI478_RS22340;Name=LI478_RS22340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS22340 NZ_CP085478.1 Protein Homology CDS 4626747 4627511 . - 0 ID=cds-WP_004222190.1;Parent=gene-LI478_RS22340;Dbxref=Genbank:WP_004222190.1;Name=WP_004222190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224814.1;locus_tag=LI478_RS22340;product=tRNA-(ms[2]io[6]A)-hydroxylase;protein_id=WP_004222190.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4627570 4627992 . - . ID=gene-LI478_RS22345;Name=rraB;gbkey=Gene;gene=rraB;gene_biotype=protein_coding;locus_tag=LI478_RS22345 NZ_CP085478.1 Protein Homology CDS 4627570 4627992 . - 0 ID=cds-WP_002886947.1;Parent=gene-LI478_RS22345;Dbxref=Genbank:WP_002886947.1;Name=WP_002886947.1;gbkey=CDS;gene=rraB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224813.1;locus_tag=LI478_RS22345;product=ribonuclease E inhibitor RraB;protein_id=WP_002886947.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4628156 4629160 . + . ID=gene-LI478_RS22350;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=LI478_RS22350 NZ_CP085478.1 Protein Homology CDS 4628156 4629160 . + 0 ID=cds-WP_021313680.1;Parent=gene-LI478_RS22350;Dbxref=Genbank:WP_021313680.1;Name=WP_021313680.1;Ontology_term=GO:0042450,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224812.1;locus_tag=LI478_RS22350;product=ornithine carbamoyltransferase;protein_id=WP_021313680.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4629222 4629674 . - . ID=gene-LI478_RS22355;Name=LI478_RS22355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS22355 NZ_CP085478.1 Protein Homology CDS 4629222 4629674 . - 0 ID=cds-WP_023287054.1;Parent=gene-LI478_RS22355;Dbxref=Genbank:WP_023287054.1;Name=WP_023287054.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224805.1;locus_tag=LI478_RS22355;product=YhcH/YjgK/YiaL family protein;protein_id=WP_023287054.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4629869 4629973 . + . ID=gene-LI478_RS22360;Name=LI478_RS22360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS22360 NZ_CP085478.1 Protein Homology CDS 4629869 4629973 . + 0 ID=cds-WP_002886930.1;Parent=gene-LI478_RS22360;Dbxref=Genbank:WP_002886930.1;Name=WP_002886930.1;Ontology_term=GO:0019856;gbkey=CDS;go_process=pyrimidine nucleobase biosynthetic process|0019856||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002886930.1;locus_tag=LI478_RS22360;product=pyrBI operon leader peptide;protein_id=WP_002886930.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4629948 4630007 . + . ID=gene-LI478_RS26475;Name=LI478_RS26475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS26475 NZ_CP085478.1 Protein Homology CDS 4629948 4630007 . + 0 ID=cds-WP_227650304.1;Parent=gene-LI478_RS26475;Dbxref=Genbank:WP_227650304.1;Name=WP_227650304.1;Ontology_term=GO:0019856;gbkey=CDS;go_process=pyrimidine nucleobase biosynthetic process|0019856||IEA;inference=COORDINATES: protein motif:HMM:NF019664.2;locus_tag=LI478_RS26475;product=pyrBI operon leader peptide;protein_id=WP_227650304.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4630010 4630945 . + . ID=gene-LI478_RS22365;Name=pyrB;gbkey=Gene;gene=pyrB;gene_biotype=protein_coding;locus_tag=LI478_RS22365 NZ_CP085478.1 Protein Homology CDS 4630010 4630945 . + 0 ID=cds-WP_002886928.1;Parent=gene-LI478_RS22365;Dbxref=Genbank:WP_002886928.1;Name=WP_002886928.1;Ontology_term=GO:0009220,GO:0004070;gbkey=CDS;gene=pyrB;go_function=aspartate carbamoyltransferase activity|0004070||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224804.1;locus_tag=LI478_RS22365;product=aspartate carbamoyltransferase;protein_id=WP_002886928.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4630959 4631420 . + . ID=gene-LI478_RS22370;Name=pyrI;gbkey=Gene;gene=pyrI;gene_biotype=protein_coding;locus_tag=LI478_RS22370 NZ_CP085478.1 Protein Homology CDS 4630959 4631420 . + 0 ID=cds-WP_002886927.1;Parent=gene-LI478_RS22370;Dbxref=Genbank:WP_002886927.1;Name=WP_002886927.1;Ontology_term=GO:0009220,GO:0004070;gbkey=CDS;gene=pyrI;go_function=aspartate carbamoyltransferase activity|0004070||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000148566.1;locus_tag=LI478_RS22370;product=aspartate carbamoyltransferase regulatory subunit;protein_id=WP_002886927.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4631573 4631959 . + . ID=gene-LI478_RS22375;Name=ridA;gbkey=Gene;gene=ridA;gene_biotype=protein_coding;locus_tag=LI478_RS22375 NZ_CP085478.1 Protein Homology CDS 4631573 4631959 . + 0 ID=cds-WP_002886926.1;Parent=gene-LI478_RS22375;Dbxref=Genbank:WP_002886926.1;Name=WP_002886926.1;gbkey=CDS;gene=ridA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224802.1;locus_tag=LI478_RS22375;product=2-iminobutanoate/2-iminopropanoate deaminase;protein_id=WP_002886926.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4632033 4634741 . - . ID=gene-LI478_RS22380;Name=mgtA;gbkey=Gene;gene=mgtA;gene_biotype=protein_coding;locus_tag=LI478_RS22380 NZ_CP085478.1 Protein Homology CDS 4632033 4634741 . - 0 ID=cds-WP_004152273.1;Parent=gene-LI478_RS22380;Dbxref=Genbank:WP_004152273.1;Name=WP_004152273.1;Ontology_term=GO:0015693,GO:0015444;gbkey=CDS;gene=mgtA;go_function=P-type magnesium transporter activity|0015444||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224801.1;locus_tag=LI478_RS22380;product=magnesium-translocating P-type ATPase;protein_id=WP_004152273.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4635121 4636068 . + . ID=gene-LI478_RS22390;Name=treR;gbkey=Gene;gene=treR;gene_biotype=protein_coding;locus_tag=LI478_RS22390 NZ_CP085478.1 Protein Homology CDS 4635121 4636068 . + 0 ID=cds-WP_004192384.1;Parent=gene-LI478_RS22390;Dbxref=Genbank:WP_004192384.1;Name=WP_004192384.1;Ontology_term=GO:0005975,GO:0006355,GO:0003700;gbkey=CDS;gene=treR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=carbohydrate metabolic process|0005975||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224800.1;locus_tag=LI478_RS22390;product=trehalose operon repressor TreR;protein_id=WP_004192384.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4636198 4637616 . + . ID=gene-LI478_RS22395;Name=treB;gbkey=Gene;gene=treB;gene_biotype=protein_coding;locus_tag=LI478_RS22395 NZ_CP085478.1 Protein Homology CDS 4636198 4637616 . + 0 ID=cds-WP_004186710.1;Parent=gene-LI478_RS22395;Dbxref=Genbank:WP_004186710.1;Name=WP_004186710.1;Ontology_term=GO:0009401,GO:0015771,GO:0008982,GO:0015574,GO:0016020;gbkey=CDS;gene=treB;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,trehalose transmembrane transporter activity|0015574||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,trehalose transport|0015771||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224799.1;locus_tag=LI478_RS22395;product=PTS trehalose transporter subunit IIBC;protein_id=WP_004186710.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4637668 4639323 . + . ID=gene-LI478_RS22400;Name=treC;gbkey=Gene;gene=treC;gene_biotype=protein_coding;locus_tag=LI478_RS22400 NZ_CP085478.1 Protein Homology CDS 4637668 4639323 . + 0 ID=cds-WP_004186708.1;Parent=gene-LI478_RS22400;Dbxref=Genbank:WP_004186708.1;Name=WP_004186708.1;Ontology_term=GO:0005991,GO:0008788;gbkey=CDS;gene=treC;go_function=alpha%2Calpha-phosphotrehalase activity|0008788||IEA;go_process=trehalose metabolic process|0005991||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224798.1;locus_tag=LI478_RS22400;product=alpha%2Calpha-phosphotrehalase;protein_id=WP_004186708.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4639379 4640731 . - . ID=gene-LI478_RS22405;Name=celB;gbkey=Gene;gene=celB;gene_biotype=protein_coding;locus_tag=LI478_RS22405 NZ_CP085478.1 Protein Homology CDS 4639379 4640731 . - 0 ID=cds-WP_004177661.1;Parent=gene-LI478_RS22405;Dbxref=Genbank:WP_004177661.1;Name=WP_004177661.1;Ontology_term=GO:0009401,GO:0008982,GO:0019191;gbkey=CDS;gene=celB;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,cellobiose transmembrane transporter activity|0019191||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224797.1;locus_tag=LI478_RS22405;product=PTS cellobiose transporter subunit IIC;protein_id=WP_004177661.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4640758 4642065 . - . ID=gene-LI478_RS22410;Name=LI478_RS22410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS22410 NZ_CP085478.1 Protein Homology CDS 4640758 4642065 . - 0 ID=cds-WP_004192387.1;Parent=gene-LI478_RS22410;Dbxref=Genbank:WP_004192387.1;Name=WP_004192387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224796.1;locus_tag=LI478_RS22410;product=6-phospho-beta-glucosidase;protein_id=WP_004192387.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4642156 4642419 . - . ID=gene-LI478_RS22415;Name=LI478_RS22415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS22415 NZ_CP085478.1 Protein Homology CDS 4642156 4642419 . - 0 ID=cds-WP_014908078.1;Parent=gene-LI478_RS22415;Dbxref=Genbank:WP_014908078.1;Name=WP_014908078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224795.1;locus_tag=LI478_RS22415;product=PTS sugar transporter subunit IIB;protein_id=WP_014908078.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4642549 4642722 . + . ID=gene-LI478_RS22420;Name=LI478_RS22420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS22420 NZ_CP085478.1 Protein Homology CDS 4642549 4642722 . + 0 ID=cds-WP_040248667.1;Parent=gene-LI478_RS22420;Dbxref=Genbank:WP_040248667.1;Name=WP_040248667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224794.1;locus_tag=LI478_RS22420;product=hypothetical protein;protein_id=WP_040248667.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4642725 4643468 . + . ID=gene-LI478_RS22425;Name=LI478_RS22425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS22425 NZ_CP085478.1 Protein Homology CDS 4642725 4643468 . + 0 ID=cds-WP_002886905.1;Parent=gene-LI478_RS22425;Dbxref=Genbank:WP_002886905.1;Name=WP_002886905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224793.1;locus_tag=LI478_RS22425;product=MurR/RpiR family transcriptional regulator;protein_id=WP_002886905.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4643825 4645963 . + . ID=gene-LI478_RS22430;Name=nrdD;gbkey=Gene;gene=nrdD;gene_biotype=protein_coding;locus_tag=LI478_RS22430 NZ_CP085478.1 Protein Homology CDS 4643825 4645963 . + 0 ID=cds-WP_004186701.1;Parent=gene-LI478_RS22430;Dbxref=Genbank:WP_004186701.1;Name=WP_004186701.1;Ontology_term=GO:0006260,GO:0008998;gbkey=CDS;gene=nrdD;go_function=ribonucleoside-triphosphate reductase activity|0008998||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224791.1;locus_tag=LI478_RS22430;product=anaerobic ribonucleoside-triphosphate reductase;protein_id=WP_004186701.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4646271 4646735 . + . ID=gene-LI478_RS22435;Name=nrdG;gbkey=Gene;gene=nrdG;gene_biotype=protein_coding;locus_tag=LI478_RS22435 NZ_CP085478.1 Protein Homology CDS 4646271 4646735 . + 0 ID=cds-WP_004222151.1;Parent=gene-LI478_RS22435;Dbxref=Genbank:WP_004222151.1;Name=WP_004222151.1;Ontology_term=GO:0043365,GO:0051539;gbkey=CDS;gene=nrdG;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224790.1;locus_tag=LI478_RS22435;product=anaerobic ribonucleoside-triphosphate reductase-activating protein;protein_id=WP_004222151.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4646739 4647023 . - . ID=gene-LI478_RS22440;Name=LI478_RS22440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS22440 NZ_CP085478.1 Protein Homology CDS 4646739 4647023 . - 0 ID=cds-WP_004178374.1;Parent=gene-LI478_RS22440;Dbxref=Genbank:WP_004178374.1;Name=WP_004178374.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224789.1;locus_tag=LI478_RS22440;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_004178374.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4647013 4647255 . - . ID=gene-LI478_RS22445;Name=LI478_RS22445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS22445 NZ_CP085478.1 Protein Homology CDS 4647013 4647255 . - 0 ID=cds-WP_002886901.1;Parent=gene-LI478_RS22445;Dbxref=Genbank:WP_002886901.1;Name=WP_002886901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224788.1;locus_tag=LI478_RS22445;product=type II toxin-antitoxin system RelB/DinJ family antitoxin;protein_id=WP_002886901.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4647333 4649243 . - . ID=gene-LI478_RS22450;Name=LI478_RS22450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS22450 NZ_CP085478.1 Protein Homology CDS 4647333 4649243 . - 0 ID=cds-WP_048299762.1;Parent=gene-LI478_RS22450;Dbxref=Genbank:WP_048299762.1;Name=WP_048299762.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224787.1;locus_tag=LI478_RS22450;product=PRD domain-containing protein;protein_id=WP_048299762.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4649266 4650420 . - . ID=gene-LI478_RS22455;Name=LI478_RS22455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS22455 NZ_CP085478.1 Protein Homology CDS 4649266 4650420 . - 0 ID=cds-WP_002886900.1;Parent=gene-LI478_RS22455;Dbxref=Genbank:WP_002886900.1;Name=WP_002886900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224786.1;locus_tag=LI478_RS22455;product=lactonase family protein;protein_id=WP_002886900.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4650487 4651227 . - . ID=gene-LI478_RS22460;Name=LI478_RS22460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS22460 NZ_CP085478.1 Protein Homology CDS 4650487 4651227 . - 0 ID=cds-WP_009486551.1;Parent=gene-LI478_RS22460;Dbxref=Genbank:WP_009486551.1;Name=WP_009486551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224785.1;locus_tag=LI478_RS22460;product=KDGP aldolase family protein;protein_id=WP_009486551.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4651224 4652342 . - . ID=gene-LI478_RS22465;Name=LI478_RS22465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS22465 NZ_CP085478.1 Protein Homology CDS 4651224 4652342 . - 0 ID=cds-WP_032425419.1;Parent=gene-LI478_RS22465;Dbxref=Genbank:WP_032425419.1;Name=WP_032425419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224784.1;locus_tag=LI478_RS22465;product=DgaE family pyridoxal phosphate-dependent ammonia lyase;protein_id=WP_032425419.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4652326 4653459 . - . ID=gene-LI478_RS22470;Name=LI478_RS22470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS22470 NZ_CP085478.1 Protein Homology CDS 4652326 4653459 . - 0 ID=cds-WP_064153663.1;Parent=gene-LI478_RS22470;Dbxref=Genbank:WP_064153663.1;Name=WP_064153663.1;Ontology_term=GO:0008150,GO:0003674,GO:0005575;gbkey=CDS;go_component=cellular_component|0005575||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224783.1;locus_tag=LI478_RS22470;product=amidohydrolase/deacetylase family metallohydrolase;protein_id=WP_064153663.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4653565 4654209 . - . ID=gene-LI478_RS22475;Name=LI478_RS22475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS22475 NZ_CP085478.1 Protein Homology CDS 4653565 4654209 . - 0 ID=cds-WP_004152267.1;Parent=gene-LI478_RS22475;Dbxref=Genbank:WP_004152267.1;Name=WP_004152267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224782.1;locus_tag=LI478_RS22475;product=DUF4310 family protein;protein_id=WP_004152267.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4654223 4654999 . - . ID=gene-LI478_RS22480;Name=LI478_RS22480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS22480 NZ_CP085478.1 Protein Homology CDS 4654223 4654999 . - 0 ID=cds-WP_002886897.1;Parent=gene-LI478_RS22480;Dbxref=Genbank:WP_002886897.1;Name=WP_002886897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224781.1;locus_tag=LI478_RS22480;product=DUF4311 domain-containing protein;protein_id=WP_002886897.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4655021 4655320 . - . ID=gene-LI478_RS22485;Name=LI478_RS22485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS22485 NZ_CP085478.1 Protein Homology CDS 4655021 4655320 . - 0 ID=cds-WP_002886896.1;Parent=gene-LI478_RS22485;Dbxref=Genbank:WP_002886896.1;Name=WP_002886896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224780.1;locus_tag=LI478_RS22485;product=DUF4312 family protein;protein_id=WP_002886896.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4655323 4655685 . - . ID=gene-LI478_RS22490;Name=LI478_RS22490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS22490 NZ_CP085478.1 Protein Homology CDS 4655323 4655685 . - 0 ID=cds-WP_002886895.1;Parent=gene-LI478_RS22490;Dbxref=Genbank:WP_002886895.1;Name=WP_002886895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224779.1;locus_tag=LI478_RS22490;product=SFCGS family glycine-rich protein;protein_id=WP_002886895.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4655696 4656034 . - . ID=gene-LI478_RS22495;Name=LI478_RS22495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS22495 NZ_CP085478.1 Protein Homology CDS 4655696 4656034 . - 0 ID=cds-WP_002886894.1;Parent=gene-LI478_RS22495;Dbxref=Genbank:WP_002886894.1;Name=WP_002886894.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224778.1;locus_tag=LI478_RS22495;product=PRD domain-containing protein;protein_id=WP_002886894.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4656324 4656710 . - . ID=gene-LI478_RS22500;Name=cybC;gbkey=Gene;gene=cybC;gene_biotype=protein_coding;locus_tag=LI478_RS22500 NZ_CP085478.1 Protein Homology CDS 4656324 4656710 . - 0 ID=cds-WP_002886893.1;Parent=gene-LI478_RS22500;Dbxref=Genbank:WP_002886893.1;Name=WP_002886893.1;Ontology_term=GO:0022900,GO:0005506,GO:0009055,GO:0042597;gbkey=CDS;gene=cybC;go_component=periplasmic space|0042597||IEA;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224776.1;locus_tag=LI478_RS22500;product=cytochrome b562;protein_id=WP_002886893.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4656747 4658099 . - . ID=gene-LI478_RS22505;Name=pmbA;gbkey=Gene;gene=pmbA;gene_biotype=protein_coding;locus_tag=LI478_RS22505 NZ_CP085478.1 Protein Homology CDS 4656747 4658099 . - 0 ID=cds-WP_004152265.1;Parent=gene-LI478_RS22505;Dbxref=Genbank:WP_004152265.1;Name=WP_004152265.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=pmbA;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463299.1;locus_tag=LI478_RS22505;product=metalloprotease PmbA;protein_id=WP_004152265.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4658195 4658746 . + . ID=gene-LI478_RS22510;Name=LI478_RS22510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS22510 NZ_CP085478.1 Protein Homology CDS 4658195 4658746 . + 0 ID=cds-WP_004177664.1;Parent=gene-LI478_RS22510;Dbxref=Genbank:WP_004177664.1;Name=WP_004177664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224774.1;locus_tag=LI478_RS22510;product=ribosome-associated protein;protein_id=WP_004177664.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4658893 4660256 . - . ID=gene-LI478_RS22515;Name=LI478_RS22515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS22515 NZ_CP085478.1 Protein Homology CDS 4659788 4660256 . - 0 ID=cds-WP_085955203.1-5;Parent=gene-LI478_RS22515;Dbxref=Genbank:WP_085955203.1;Name=WP_085955203.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611151.1;locus_tag=LI478_RS22515;product=IS3-like element ISKpn1 family transposase;protein_id=WP_085955203.1;transl_table=11 NZ_CP085478.1 Protein Homology CDS 4658893 4659788 . - 2 ID=cds-WP_085955203.1-5;Parent=gene-LI478_RS22515;Dbxref=Genbank:WP_085955203.1;Name=WP_085955203.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611151.1;locus_tag=LI478_RS22515;product=IS3-like element ISKpn1 family transposase;protein_id=WP_085955203.1;transl_table=11 NZ_CP085478.1 RefSeq pseudogene 4660397 4660511 . - . ID=gene-LI478_RS22520;Name=LI478_RS22520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS22520;pseudo=true NZ_CP085478.1 Protein Homology CDS 4660397 4660511 . - 0 ID=cds-LI478_RS22520;Parent=gene-LI478_RS22520;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224773.1;locus_tag=LI478_RS22520;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP085478.1 RefSeq gene 4660696 4661904 . + . ID=gene-LI478_RS22525;Name=LI478_RS22525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS22525 NZ_CP085478.1 Protein Homology CDS 4660696 4661904 . + 0 ID=cds-WP_002886890.1;Parent=gene-LI478_RS22525;Dbxref=Genbank:WP_002886890.1;Name=WP_002886890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224772.1;locus_tag=LI478_RS22525;product=aldose 1-epimerase family protein;protein_id=WP_002886890.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4661948 4662475 . - . ID=gene-LI478_RS22530;Name=LI478_RS22530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS22530 NZ_CP085478.1 Protein Homology CDS 4661948 4662475 . - 0 ID=cds-WP_002886889.1;Parent=gene-LI478_RS22530;Dbxref=Genbank:WP_002886889.1;Name=WP_002886889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224771.1;locus_tag=LI478_RS22530;product=GNAT family N-acetyltransferase;protein_id=WP_002886889.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4662544 4663917 . - . ID=gene-LI478_RS22535;Name=mpl;gbkey=Gene;gene=mpl;gene_biotype=protein_coding;locus_tag=LI478_RS22535 NZ_CP085478.1 Protein Homology CDS 4662544 4663917 . - 0 ID=cds-WP_002886886.1;Parent=gene-LI478_RS22535;Dbxref=Genbank:WP_002886886.1;Name=WP_002886886.1;Ontology_term=GO:0009252,GO:0016881;gbkey=CDS;gene=mpl;go_function=acid-amino acid ligase activity|0016881||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224770.1;locus_tag=LI478_RS22535;product=UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase;protein_id=WP_002886886.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4664093 4665091 . + . ID=gene-LI478_RS22540;Name=fbp;gbkey=Gene;gene=fbp;gene_biotype=protein_coding;locus_tag=LI478_RS22540 NZ_CP085478.1 Protein Homology CDS 4664093 4665091 . + 0 ID=cds-WP_002886827.1;Parent=gene-LI478_RS22540;Dbxref=Genbank:WP_002886827.1;Name=WP_002886827.1;Ontology_term=GO:0005975,GO:0042132;gbkey=CDS;gene=fbp;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016233757.1;locus_tag=LI478_RS22540;product=class 1 fructose-bisphosphatase;protein_id=WP_002886827.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4665134 4666132 . - . ID=gene-LI478_RS22545;Name=yjfF;gbkey=Gene;gene=yjfF;gene_biotype=protein_coding;locus_tag=LI478_RS22545 NZ_CP085478.1 Protein Homology CDS 4665134 4666132 . - 0 ID=cds-WP_002886825.1;Parent=gene-LI478_RS22545;Dbxref=Genbank:WP_002886825.1;Name=WP_002886825.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yjfF;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019704695.1;locus_tag=LI478_RS22545;product=sugar ABC transporter permease YjfF;protein_id=WP_002886825.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4666119 4667144 . - . ID=gene-LI478_RS22550;Name=LI478_RS22550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS22550 NZ_CP085478.1 Protein Homology CDS 4666119 4667144 . - 0 ID=cds-WP_004152011.1;Parent=gene-LI478_RS22550;Dbxref=Genbank:WP_004152011.1;Name=WP_004152011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224767.1;locus_tag=LI478_RS22550;product=ABC transporter permease;protein_id=WP_004152011.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4667155 4668657 . - . ID=gene-LI478_RS22555;Name=LI478_RS22555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS22555 NZ_CP085478.1 Protein Homology CDS 4667155 4668657 . - 0 ID=cds-WP_004177669.1;Parent=gene-LI478_RS22555;Dbxref=Genbank:WP_004177669.1;Name=WP_004177669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224766.1;locus_tag=LI478_RS22555;product=sugar ABC transporter ATP-binding protein;protein_id=WP_004177669.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4668781 4669737 . - . ID=gene-LI478_RS22560;Name=LI478_RS22560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS22560 NZ_CP085478.1 Protein Homology CDS 4668781 4669737 . - 0 ID=cds-WP_002886769.1;Parent=gene-LI478_RS22560;Dbxref=Genbank:WP_002886769.1;Name=WP_002886769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313232.1;locus_tag=LI478_RS22560;product=ABC transporter substrate-binding protein;protein_id=WP_002886769.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4670141 4670671 . + . ID=gene-LI478_RS22565;Name=ppa;gbkey=Gene;gene=ppa;gene_biotype=protein_coding;locus_tag=LI478_RS22565 NZ_CP085478.1 Protein Homology CDS 4670141 4670671 . + 0 ID=cds-WP_002886766.1;Parent=gene-LI478_RS22565;Dbxref=Genbank:WP_002886766.1;Name=WP_002886766.1;Ontology_term=GO:0006796,GO:0004427;gbkey=CDS;gene=ppa;go_function=inorganic diphosphate phosphatase activity|0004427||IEA;go_process=phosphate-containing compound metabolic process|0006796||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001739810.1;locus_tag=LI478_RS22565;product=inorganic diphosphatase;protein_id=WP_002886766.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4670746 4671933 . + . ID=gene-LI478_RS22570;Name=LI478_RS22570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS22570 NZ_CP085478.1 Protein Homology CDS 4670746 4671933 . + 0 ID=cds-WP_032413227.1;Parent=gene-LI478_RS22570;Dbxref=Genbank:WP_032413227.1;Name=WP_032413227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224762.1;locus_tag=LI478_RS22570;product=hypothetical protein;protein_id=WP_032413227.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4672078 4672422 . - . ID=gene-LI478_RS22575;Name=LI478_RS22575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS22575 NZ_CP085478.1 Protein Homology CDS 4672078 4672422 . - 0 ID=cds-WP_002886724.1;Parent=gene-LI478_RS22575;Dbxref=Genbank:WP_002886724.1;Name=WP_002886724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012907370.1;locus_tag=LI478_RS22575;product=gamma-glutamylcyclotransferase;protein_id=WP_002886724.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4672425 4676201 . - . ID=gene-LI478_RS22580;Name=tamB;gbkey=Gene;gene=tamB;gene_biotype=protein_coding;locus_tag=LI478_RS22580 NZ_CP085478.1 Protein Homology CDS 4672425 4676201 . - 0 ID=cds-WP_048332308.1;Parent=gene-LI478_RS22580;Dbxref=Genbank:WP_048332308.1;Name=WP_048332308.1;gbkey=CDS;gene=tamB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224759.1;locus_tag=LI478_RS22580;product=autotransporter assembly complex protein TamB;protein_id=WP_048332308.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4676198 4677931 . - . ID=gene-LI478_RS22585;Name=tamA;gbkey=Gene;gene=tamA;gene_biotype=protein_coding;locus_tag=LI478_RS22585 NZ_CP085478.1 Protein Homology CDS 4676198 4677931 . - 0 ID=cds-WP_002886722.1;Parent=gene-LI478_RS22585;Dbxref=Genbank:WP_002886722.1;Name=WP_002886722.1;gbkey=CDS;gene=tamA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224758.1;locus_tag=LI478_RS22585;product=autotransporter assembly complex protein TamA;protein_id=WP_002886722.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4678140 4678778 . + . ID=gene-LI478_RS22590;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=LI478_RS22590 NZ_CP085478.1 Protein Homology CDS 4678140 4678778 . + 0 ID=cds-WP_002886721.1;Parent=gene-LI478_RS22590;Dbxref=Genbank:WP_002886721.1;Name=WP_002886721.1;Ontology_term=GO:0006979,GO:0030091,GO:0008113,GO:0033744;gbkey=CDS;gene=msrA;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA,L-methionine:thioredoxin-disulfide S-oxidoreductase activity|0033744||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224757.1;locus_tag=LI478_RS22590;product=peptide-methionine (S)-S-oxide reductase MsrA;protein_id=WP_002886721.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4678959 4680296 . + . ID=gene-LI478_RS22595;Name=LI478_RS22595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS22595 NZ_CP085478.1 Protein Homology CDS 4678959 4680296 . + 0 ID=cds-WP_002886718.1;Parent=gene-LI478_RS22595;Dbxref=Genbank:WP_002886718.1;Name=WP_002886718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224756.1;locus_tag=LI478_RS22595;product=hemolysin family protein;protein_id=WP_002886718.1;transl_table=11 NZ_CP085478.1 RefSeq pseudogene 4680366 4680497 . + . ID=gene-LI478_RS22600;Name=LI478_RS22600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS22600;partial=true;pseudo=true;start_range=.,4680366 NZ_CP085478.1 Protein Homology CDS 4680366 4680497 . + 0 ID=cds-LI478_RS22600;Parent=gene-LI478_RS22600;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014227637.1;locus_tag=LI478_RS22600;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;start_range=.,4680366;transl_table=11 NZ_CP085478.1 RefSeq gene 4680559 4680765 . - . ID=gene-LI478_RS22605;Name=LI478_RS22605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS22605 NZ_CP085478.1 Protein Homology CDS 4680559 4680765 . - 0 ID=cds-WP_002886707.1;Parent=gene-LI478_RS22605;Dbxref=Genbank:WP_002886707.1;Name=WP_002886707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966176.1;locus_tag=LI478_RS22605;product=DUF1107 domain-containing protein;protein_id=WP_002886707.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4681089 4681646 . + . ID=gene-LI478_RS22610;Name=LI478_RS22610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS22610 NZ_CP085478.1 Protein Homology CDS 4681089 4681646 . + 0 ID=cds-WP_002886706.1;Parent=gene-LI478_RS22610;Dbxref=Genbank:WP_002886706.1;Name=WP_002886706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224754.1;locus_tag=LI478_RS22610;product=YtfJ family protein;protein_id=WP_002886706.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4681636 4682379 . - . ID=gene-LI478_RS22615;Name=cysQ;gbkey=Gene;gene=cysQ;gene_biotype=protein_coding;locus_tag=LI478_RS22615 NZ_CP085478.1 Protein Homology CDS 4681636 4682379 . - 0 ID=cds-WP_002886705.1;Parent=gene-LI478_RS22615;Dbxref=Genbank:WP_002886705.1;Name=WP_002886705.1;Ontology_term=GO:0046855,GO:0000287,GO:0008441;gbkey=CDS;gene=cysQ;go_function=magnesium ion binding|0000287||IEA,3'(2')%2C5'-bisphosphate nucleotidase activity|0008441||IEA;go_process=inositol phosphate dephosphorylation|0046855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463265.1;locus_tag=LI478_RS22615;product=3'(2')%2C5'-bisphosphate nucleotidase CysQ;protein_id=WP_002886705.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4682571 4684514 . + . ID=gene-LI478_RS22620;Name=cpdB;gbkey=Gene;gene=cpdB;gene_biotype=protein_coding;locus_tag=LI478_RS22620 NZ_CP085478.1 Protein Homology CDS 4682571 4684514 . + 0 ID=cds-WP_004177678.1;Parent=gene-LI478_RS22620;Dbxref=Genbank:WP_004177678.1;Name=WP_004177678.1;Ontology_term=GO:0006139,GO:0008663,GO:0009897,GO:0030288;gbkey=CDS;gene=cpdB;go_component=external side of plasma membrane|0009897||IEA,outer membrane-bounded periplasmic space|0030288||IEA;go_function=2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase activity|0008663||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224752.1;locus_tag=LI478_RS22620;product=2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase;protein_id=WP_004177678.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4684569 4684940 . - . ID=gene-LI478_RS22625;Name=LI478_RS22625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS22625 NZ_CP085478.1 Protein Homology CDS 4684569 4684940 . - 0 ID=cds-WP_004152015.1;Parent=gene-LI478_RS22625;Dbxref=Genbank:WP_004152015.1;Name=WP_004152015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224751.1;locus_tag=LI478_RS22625;product=helix-turn-helix domain-containing protein;protein_id=WP_004152015.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4685030 4685878 . + . ID=gene-LI478_RS22630;Name=LI478_RS22630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS22630 NZ_CP085478.1 Protein Homology CDS 4685030 4685878 . + 0 ID=cds-WP_032439130.1;Parent=gene-LI478_RS22630;Dbxref=Genbank:WP_032439130.1;Name=WP_032439130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224750.1;locus_tag=LI478_RS22630;product=SDR family oxidoreductase;protein_id=WP_032439130.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4685956 4686780 . + . ID=gene-LI478_RS22635;Name=LI478_RS22635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS22635 NZ_CP085478.1 Protein Homology CDS 4685956 4686780 . + 0 ID=cds-WP_002886699.1;Parent=gene-LI478_RS22635;Dbxref=Genbank:WP_002886699.1;Name=WP_002886699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224749.1;locus_tag=LI478_RS22635;product=AraC family transcriptional regulator;protein_id=WP_002886699.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4686856 4687827 . + . ID=gene-LI478_RS22640;Name=LI478_RS22640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS22640 NZ_CP085478.1 Protein Homology CDS 4686856 4687827 . + 0 ID=cds-WP_032439129.1;Parent=gene-LI478_RS22640;Dbxref=Genbank:WP_032439129.1;Name=WP_032439129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224748.1;locus_tag=LI478_RS22640;product=DMT family transporter;protein_id=WP_032439129.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4687910 4688572 . + . ID=gene-LI478_RS22645;Name=ytfE;gbkey=Gene;gene=ytfE;gene_biotype=protein_coding;locus_tag=LI478_RS22645 NZ_CP085478.1 Protein Homology CDS 4687910 4688572 . + 0 ID=cds-WP_004152016.1;Parent=gene-LI478_RS22645;Dbxref=Genbank:WP_004152016.1;Name=WP_004152016.1;gbkey=CDS;gene=ytfE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224747.1;locus_tag=LI478_RS22645;product=iron-sulfur cluster repair protein YtfE;protein_id=WP_004152016.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4688677 4690080 . - . ID=gene-LI478_RS22650;Name=cycA;gbkey=Gene;gene=cycA;gene_biotype=protein_coding;gene_synonym=dagA;locus_tag=LI478_RS22650 NZ_CP085478.1 Protein Homology CDS 4688677 4690080 . - 0 ID=cds-WP_002886688.1;Parent=gene-LI478_RS22650;Dbxref=Genbank:WP_002886688.1;Name=WP_002886688.1;Ontology_term=GO:0006865,GO:0055085,GO:0016020;gbkey=CDS;gene=cycA;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224746.1;locus_tag=LI478_RS22650;product=D-serine/D-alanine/glycine transporter;protein_id=WP_002886688.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4690385 4691005 . - . ID=gene-LI478_RS22655;Name=fklB;gbkey=Gene;gene=fklB;gene_biotype=protein_coding;locus_tag=LI478_RS22655 NZ_CP085478.1 Protein Homology CDS 4690385 4691005 . - 0 ID=cds-WP_002886687.1;Parent=gene-LI478_RS22655;Dbxref=Genbank:WP_002886687.1;Name=WP_002886687.1;gbkey=CDS;gene=fklB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015742582.1;locus_tag=LI478_RS22655;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_002886687.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4691224 4691898 . + . ID=gene-LI478_RS22660;Name=LI478_RS22660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS22660 NZ_CP085478.1 Protein Homology CDS 4691224 4691898 . + 0 ID=cds-WP_004177687.1;Parent=gene-LI478_RS22660;Dbxref=Genbank:WP_004177687.1;Name=WP_004177687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224744.1;locus_tag=LI478_RS22660;product=hypothetical protein;protein_id=WP_004177687.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4692007 4692456 . - . ID=gene-LI478_RS22665;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=LI478_RS22665 NZ_CP085478.1 Protein Homology CDS 4692007 4692456 . - 0 ID=cds-WP_002886682.1;Parent=gene-LI478_RS22665;Dbxref=Genbank:WP_002886682.1;Name=WP_002886682.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplI;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134442.1;locus_tag=LI478_RS22665;product=50S ribosomal protein L9;protein_id=WP_002886682.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4692498 4692725 . - . ID=gene-LI478_RS22670;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=LI478_RS22670 NZ_CP085478.1 Protein Homology CDS 4692498 4692725 . - 0 ID=cds-WP_000135199.1;Parent=gene-LI478_RS22670;Dbxref=Genbank:WP_000135199.1;Name=WP_000135199.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsR;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012986941.1;locus_tag=LI478_RS22670;product=30S ribosomal protein S18;protein_id=WP_000135199.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4692730 4693044 . - . ID=gene-LI478_RS22675;Name=priB;gbkey=Gene;gene=priB;gene_biotype=protein_coding;locus_tag=LI478_RS22675 NZ_CP085478.1 Protein Homology CDS 4692730 4693044 . - 0 ID=cds-WP_002885722.1;Parent=gene-LI478_RS22675;Dbxref=Genbank:WP_002885722.1;Name=WP_002885722.1;Ontology_term=GO:0006269,GO:0003697;gbkey=CDS;gene=priB;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication%2C synthesis of RNA primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313204.1;locus_tag=LI478_RS22675;product=primosomal replication protein N;protein_id=WP_002885722.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4693050 4693445 . - . ID=gene-LI478_RS22680;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=LI478_RS22680 NZ_CP085478.1 Protein Homology CDS 4693050 4693445 . - 0 ID=cds-WP_002885691.1;Parent=gene-LI478_RS22680;Dbxref=Genbank:WP_002885691.1;Name=WP_002885691.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsF;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456251.1;locus_tag=LI478_RS22680;product=30S ribosomal protein S6;protein_id=WP_002885691.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4693786 4694061 . + . ID=gene-LI478_RS22685;Name=LI478_RS22685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS22685 NZ_CP085478.1 Protein Homology CDS 4693786 4694061 . + 0 ID=cds-WP_002885689.1;Parent=gene-LI478_RS22685;Dbxref=Genbank:WP_002885689.1;Name=WP_002885689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224740.1;locus_tag=LI478_RS22685;product=DUF1471 domain-containing protein;protein_id=WP_002885689.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4694211 4695404 . + . ID=gene-LI478_RS22690;Name=LI478_RS22690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS22690 NZ_CP085478.1 Protein Homology CDS 4694211 4695404 . + 0 ID=cds-WP_025368524.1;Parent=gene-LI478_RS22690;Dbxref=Genbank:WP_025368524.1;Name=WP_025368524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224739.1;locus_tag=LI478_RS22690;product=MFS transporter;protein_id=WP_025368524.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4695468 4696154 . - . ID=gene-LI478_RS22695;Name=LI478_RS22695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS22695 NZ_CP085478.1 Protein Homology CDS 4695468 4696154 . - 0 ID=cds-WP_002885687.1;Parent=gene-LI478_RS22695;Dbxref=Genbank:WP_002885687.1;Name=WP_002885687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224738.1;locus_tag=LI478_RS22695;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_002885687.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4696154 4697008 . - . ID=gene-LI478_RS22700;Name=LI478_RS22700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS22700 NZ_CP085478.1 Protein Homology CDS 4696154 4697008 . - 0 ID=cds-WP_227394157.1;Parent=gene-LI478_RS22700;Dbxref=Genbank:WP_227394157.1;Name=WP_227394157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224737.1;locus_tag=LI478_RS22700;product=L-ribulose-5-phosphate 3-epimerase;protein_id=WP_227394157.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4697018 4697668 . - . ID=gene-LI478_RS22705;Name=ulaD;gbkey=Gene;gene=ulaD;gene_biotype=protein_coding;locus_tag=LI478_RS22705 NZ_CP085478.1 Protein Homology CDS 4697018 4697668 . - 0 ID=cds-WP_002885684.1;Parent=gene-LI478_RS22705;Dbxref=Genbank:WP_002885684.1;Name=WP_002885684.1;gbkey=CDS;gene=ulaD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224736.1;locus_tag=LI478_RS22705;product=3-keto-L-gulonate-6-phosphate decarboxylase UlaD;protein_id=WP_002885684.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4697682 4698149 . - . ID=gene-LI478_RS22710;Name=ulaC;gbkey=Gene;gene=ulaC;gene_biotype=protein_coding;locus_tag=LI478_RS22710 NZ_CP085478.1 Protein Homology CDS 4697682 4698149 . - 0 ID=cds-WP_002885683.1;Parent=gene-LI478_RS22710;Dbxref=Genbank:WP_002885683.1;Name=WP_002885683.1;gbkey=CDS;gene=ulaC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224735.1;locus_tag=LI478_RS22710;product=PTS ascorbate transporter subunit IIA;protein_id=WP_002885683.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4698159 4698464 . - . ID=gene-LI478_RS22715;Name=ulaB;gbkey=Gene;gene=ulaB;gene_biotype=protein_coding;locus_tag=LI478_RS22715 NZ_CP085478.1 Protein Homology CDS 4698159 4698464 . - 0 ID=cds-WP_002885682.1;Parent=gene-LI478_RS22715;Dbxref=Genbank:WP_002885682.1;Name=WP_002885682.1;gbkey=CDS;gene=ulaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710059.2;locus_tag=LI478_RS22715;product=PTS ascorbate transporter subunit IIB;protein_id=WP_002885682.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4698477 4699877 . - . ID=gene-LI478_RS22720;Name=ulaA;gbkey=Gene;gene=ulaA;gene_biotype=protein_coding;locus_tag=LI478_RS22720 NZ_CP085478.1 Protein Homology CDS 4698477 4699877 . - 0 ID=cds-WP_002885681.1;Parent=gene-LI478_RS22720;Dbxref=Genbank:WP_002885681.1;Name=WP_002885681.1;gbkey=CDS;gene=ulaA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224733.1;locus_tag=LI478_RS22720;product=PTS ascorbate transporter subunit IIC;protein_id=WP_002885681.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4700240 4701304 . + . ID=gene-LI478_RS22725;Name=ulaG;gbkey=Gene;gene=ulaG;gene_biotype=protein_coding;locus_tag=LI478_RS22725 NZ_CP085478.1 Protein Homology CDS 4700240 4701304 . + 0 ID=cds-WP_004194176.1;Parent=gene-LI478_RS22725;Dbxref=Genbank:WP_004194176.1;Name=WP_004194176.1;Ontology_term=GO:0019854,GO:0030145,GO:0035460;gbkey=CDS;gene=ulaG;go_function=manganese ion binding|0030145||IEA,L-ascorbate 6-phosphate lactonase activity|0035460||IEA;go_process=L-ascorbic acid catabolic process|0019854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003856017.1;locus_tag=LI478_RS22725;product=L-ascorbate 6-phosphate lactonase;protein_id=WP_004194176.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4701412 4702167 . + . ID=gene-LI478_RS22730;Name=ulaR;gbkey=Gene;gene=ulaR;gene_biotype=protein_coding;locus_tag=LI478_RS22730 NZ_CP085478.1 Protein Homology CDS 4701412 4702167 . + 0 ID=cds-WP_004177697.1;Parent=gene-LI478_RS22730;Dbxref=Genbank:WP_004177697.1;Name=WP_004177697.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ulaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224731.1;locus_tag=LI478_RS22730;product=HTH-type transcriptional regulator UlaR;protein_id=WP_004177697.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4702164 4702880 . - . ID=gene-LI478_RS22735;Name=yjfP;gbkey=Gene;gene=yjfP;gene_biotype=protein_coding;locus_tag=LI478_RS22735 NZ_CP085478.1 Protein Homology CDS 4702164 4702880 . - 0 ID=cds-WP_004178343.1;Parent=gene-LI478_RS22735;Dbxref=Genbank:WP_004178343.1;Name=WP_004178343.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;gene=yjfP;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224730.1;locus_tag=LI478_RS22735;product=esterase;protein_id=WP_004178343.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4703090 4703398 . + . ID=gene-LI478_RS22740;Name=bsmA;gbkey=Gene;gene=bsmA;gene_biotype=protein_coding;locus_tag=LI478_RS22740 NZ_CP085478.1 Protein Homology CDS 4703090 4703398 . + 0 ID=cds-WP_002885674.1;Parent=gene-LI478_RS22740;Dbxref=Genbank:WP_002885674.1;Name=WP_002885674.1;gbkey=CDS;gene=bsmA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224729.1;locus_tag=LI478_RS22740;product=biofilm peroxide resistance protein BsmA;protein_id=WP_002885674.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4703536 4703811 . + . ID=gene-LI478_RS22745;Name=yjfN;gbkey=Gene;gene=yjfN;gene_biotype=protein_coding;locus_tag=LI478_RS22745 NZ_CP085478.1 Protein Homology CDS 4703536 4703811 . + 0 ID=cds-WP_002885673.1;Parent=gene-LI478_RS22745;Dbxref=Genbank:WP_002885673.1;Name=WP_002885673.1;gbkey=CDS;gene=yjfN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224728.1;locus_tag=LI478_RS22745;product=DUF1471 family protease activator YjfN;protein_id=WP_002885673.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4703802 4705439 . - . ID=gene-LI478_RS22750;Name=LI478_RS22750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS22750 NZ_CP085478.1 Protein Homology CDS 4703802 4705439 . - 0 ID=cds-WP_048271194.1;Parent=gene-LI478_RS22750;Dbxref=Genbank:WP_048271194.1;Name=WP_048271194.1;Ontology_term=GO:0003995;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224727.1;locus_tag=LI478_RS22750;product=isovaleryl-CoA dehydrogenase;protein_id=WP_048271194.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4705565 4706296 . - . ID=gene-LI478_RS22755;Name=rlmB;gbkey=Gene;gene=rlmB;gene_biotype=protein_coding;locus_tag=LI478_RS22755 NZ_CP085478.1 Protein Homology CDS 4705565 4706296 . - 0 ID=cds-WP_002885669.1;Parent=gene-LI478_RS22755;Dbxref=Genbank:WP_002885669.1;Name=WP_002885669.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;gene=rlmB;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313183.1;locus_tag=LI478_RS22755;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=WP_002885669.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4706378 4708810 . - . ID=gene-LI478_RS22760;Name=rnr;gbkey=Gene;gene=rnr;gene_biotype=protein_coding;locus_tag=LI478_RS22760 NZ_CP085478.1 Protein Homology CDS 4706378 4708810 . - 0 ID=cds-WP_002885668.1;Parent=gene-LI478_RS22760;Dbxref=Genbank:WP_002885668.1;Name=WP_002885668.1;Ontology_term=GO:0016070,GO:0004540;gbkey=CDS;gene=rnr;go_function=ribonuclease activity|0004540||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224725.1;locus_tag=LI478_RS22760;product=ribonuclease R;protein_id=WP_002885668.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4708847 4709272 . - . ID=gene-LI478_RS22765;Name=nsrR;gbkey=Gene;gene=nsrR;gene_biotype=protein_coding;locus_tag=LI478_RS22765 NZ_CP085478.1 Protein Homology CDS 4708847 4709272 . - 0 ID=cds-WP_002885667.1;Parent=gene-LI478_RS22765;Dbxref=Genbank:WP_002885667.1;Name=WP_002885667.1;gbkey=CDS;gene=nsrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134424.1;locus_tag=LI478_RS22765;product=nitric oxide-sensing transcriptional repressor NsrR;protein_id=WP_002885667.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4709423 4710721 . - . ID=gene-LI478_RS22770;Name=LI478_RS22770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS22770 NZ_CP085478.1 Protein Homology CDS 4709423 4710721 . - 0 ID=cds-WP_002885665.1;Parent=gene-LI478_RS22770;Dbxref=Genbank:WP_002885665.1;Name=WP_002885665.1;Ontology_term=GO:0006164,GO:0004019,GO:0005525;gbkey=CDS;go_function=adenylosuccinate synthase activity|0004019||IEA,GTP binding|0005525||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019842885.1;locus_tag=LI478_RS22770;product=adenylosuccinate synthase;protein_id=WP_002885665.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4710824 4711021 . - . ID=gene-LI478_RS22775;Name=LI478_RS22775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS22775 NZ_CP085478.1 Protein Homology CDS 4710824 4711021 . - 0 ID=cds-WP_002885664.1;Parent=gene-LI478_RS22775;Dbxref=Genbank:WP_002885664.1;Name=WP_002885664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224722.1;locus_tag=LI478_RS22775;product=DUF2065 domain-containing protein;protein_id=WP_002885664.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4711244 4711534 . + . ID=gene-LI478_RS22780;Name=LI478_RS22780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS22780 NZ_CP085478.1 Protein Homology CDS 4711244 4711534 . + 0 ID=cds-WP_004894787.1;Parent=gene-LI478_RS22780;Dbxref=Genbank:WP_004894787.1;Name=WP_004894787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224720.1;locus_tag=LI478_RS22780;product=hypothetical protein;protein_id=WP_004894787.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4711617 4712621 . - . ID=gene-LI478_RS22785;Name=hflC;gbkey=Gene;gene=hflC;gene_biotype=protein_coding;locus_tag=LI478_RS22785 NZ_CP085478.1 Protein Homology CDS 4711617 4712621 . - 0 ID=cds-WP_004192484.1;Parent=gene-LI478_RS22785;Dbxref=Genbank:WP_004192484.1;Name=WP_004192484.1;gbkey=CDS;gene=hflC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224719.1;locus_tag=LI478_RS22785;product=protease modulator HflC;protein_id=WP_004192484.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4712624 4713886 . - . ID=gene-LI478_RS22790;Name=hflK;gbkey=Gene;gene=hflK;gene_biotype=protein_coding;locus_tag=LI478_RS22790 NZ_CP085478.1 Protein Homology CDS 4712624 4713886 . - 0 ID=cds-WP_004146726.1;Parent=gene-LI478_RS22790;Dbxref=Genbank:WP_004146726.1;Name=WP_004146726.1;Ontology_term=GO:0016020;gbkey=CDS;gene=hflK;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224718.1;locus_tag=LI478_RS22790;product=FtsH protease activity modulator HflK;protein_id=WP_004146726.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4713952 4715232 . - . ID=gene-LI478_RS22795;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=protein_coding;locus_tag=LI478_RS22795 NZ_CP085478.1 Protein Homology CDS 4713952 4715232 . - 0 ID=cds-WP_004146725.1;Parent=gene-LI478_RS22795;Dbxref=Genbank:WP_004146725.1;Name=WP_004146725.1;Ontology_term=GO:0005525;gbkey=CDS;gene=hflX;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224717.1;locus_tag=LI478_RS22795;product=GTPase HflX;protein_id=WP_004146725.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4715308 4715616 . - . ID=gene-LI478_RS22800;Name=hfq;gbkey=Gene;gene=hfq;gene_biotype=protein_coding;locus_tag=LI478_RS22800 NZ_CP085478.1 Protein Homology CDS 4715308 4715616 . - 0 ID=cds-WP_002885659.1;Parent=gene-LI478_RS22800;Dbxref=Genbank:WP_002885659.1;Name=WP_002885659.1;Ontology_term=GO:0006355,GO:0003723;gbkey=CDS;gene=hfq;go_function=RNA binding|0003723||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224716.1;locus_tag=LI478_RS22800;product=RNA chaperone Hfq;protein_id=WP_002885659.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4715709 4716659 . - . ID=gene-LI478_RS22805;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=LI478_RS22805 NZ_CP085478.1 Protein Homology CDS 4715709 4716659 . - 0 ID=cds-WP_002885652.1;Parent=gene-LI478_RS22805;Dbxref=Genbank:WP_002885652.1;Name=WP_002885652.1;Ontology_term=GO:0006400,GO:0052381,GO:0005737;gbkey=CDS;gene=miaA;go_component=cytoplasm|0005737||IEA;go_function=tRNA dimethylallyltransferase activity|0052381||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014599015.1;locus_tag=LI478_RS22805;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=WP_002885652.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4716652 4718511 . - . ID=gene-LI478_RS22810;Name=mutL;gbkey=Gene;gene=mutL;gene_biotype=protein_coding;locus_tag=LI478_RS22810 NZ_CP085478.1 Protein Homology CDS 4716652 4718511 . - 0 ID=cds-WP_004152020.1;Parent=gene-LI478_RS22810;Dbxref=Genbank:WP_004152020.1;Name=WP_004152020.1;Ontology_term=GO:0006298,GO:0005524,GO:0016887,GO:0030983,GO:0032300;gbkey=CDS;gene=mutL;go_component=mismatch repair complex|0032300||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004192487.1;locus_tag=LI478_RS22810;product=DNA mismatch repair endonuclease MutL;protein_id=WP_004152020.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4718522 4719877 . - . ID=gene-LI478_RS22815;Name=amiB;gbkey=Gene;gene=amiB;gene_biotype=protein_coding;locus_tag=LI478_RS22815 NZ_CP085478.1 Protein Homology CDS 4718522 4719877 . - 0 ID=cds-WP_004152021.1;Parent=gene-LI478_RS22815;Dbxref=Genbank:WP_004152021.1;Name=WP_004152021.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=amiB;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224712.1;locus_tag=LI478_RS22815;product=N-acetylmuramoyl-L-alanine amidase AmiB;protein_id=WP_004152021.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4719894 4720355 . - . ID=gene-LI478_RS22820;Name=tsaE;gbkey=Gene;gene=tsaE;gene_biotype=protein_coding;locus_tag=LI478_RS22820 NZ_CP085478.1 Protein Homology CDS 4719894 4720355 . - 0 ID=cds-WP_002885589.1;Parent=gene-LI478_RS22820;Dbxref=Genbank:WP_002885589.1;Name=WP_002885589.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaE;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002885589.1;locus_tag=LI478_RS22820;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;protein_id=WP_002885589.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4720348 4721859 . - . ID=gene-LI478_RS22825;Name=nnr;gbkey=Gene;gene=nnr;gene_biotype=protein_coding;locus_tag=LI478_RS22825 NZ_CP085478.1 Protein Homology CDS 4720348 4721859 . - 0 ID=cds-WP_004198690.1;Parent=gene-LI478_RS22825;Dbxref=Genbank:WP_004198690.1;Name=WP_004198690.1;Ontology_term=GO:0052855;gbkey=CDS;gene=nnr;go_function=ADP-dependent NAD(P)H-hydrate dehydratase activity|0052855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224710.1;locus_tag=LI478_RS22825;product=bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase;protein_id=WP_004198690.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4721873 4723012 . + . ID=gene-LI478_RS22830;Name=queG;gbkey=Gene;gene=queG;gene_biotype=protein_coding;locus_tag=LI478_RS22830 NZ_CP085478.1 Protein Homology CDS 4721873 4723012 . + 0 ID=cds-WP_004178333.1;Parent=gene-LI478_RS22830;Dbxref=Genbank:WP_004178333.1;Name=WP_004178333.1;Ontology_term=GO:0008616,GO:0051539,GO:0052693;gbkey=CDS;gene=queG;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,epoxyqueuosine reductase activity|0052693||IEA;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224709.1;locus_tag=LI478_RS22830;product=tRNA epoxyqueuosine(34) reductase QueG;protein_id=WP_004178333.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4723283 4723358 . - . ID=gene-LI478_RS22835;Name=LI478_RS22835;gbkey=Gene;gene_biotype=tRNA;locus_tag=LI478_RS22835 NZ_CP085478.1 tRNAscan-SE tRNA 4723283 4723358 . - . ID=rna-LI478_RS22835;Parent=gene-LI478_RS22835;anticodon=(pos:complement(4723323..4723325));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS22835;product=tRNA-Gly NZ_CP085478.1 tRNAscan-SE exon 4723283 4723358 . - . ID=exon-LI478_RS22835-1;Parent=rna-LI478_RS22835;anticodon=(pos:complement(4723323..4723325));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS22835;product=tRNA-Gly NZ_CP085478.1 RefSeq gene 4723431 4723506 . - . ID=gene-LI478_RS22840;Name=LI478_RS22840;gbkey=Gene;gene_biotype=tRNA;locus_tag=LI478_RS22840 NZ_CP085478.1 tRNAscan-SE tRNA 4723431 4723506 . - . ID=rna-LI478_RS22840;Parent=gene-LI478_RS22840;anticodon=(pos:complement(4723471..4723473));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS22840;product=tRNA-Gly NZ_CP085478.1 tRNAscan-SE exon 4723431 4723506 . - . ID=exon-LI478_RS22840-1;Parent=rna-LI478_RS22840;anticodon=(pos:complement(4723471..4723473));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS22840;product=tRNA-Gly NZ_CP085478.1 RefSeq gene 4723575 4723650 . - . ID=gene-LI478_RS22845;Name=LI478_RS22845;gbkey=Gene;gene_biotype=tRNA;locus_tag=LI478_RS22845 NZ_CP085478.1 tRNAscan-SE tRNA 4723575 4723650 . - . ID=rna-LI478_RS22845;Parent=gene-LI478_RS22845;anticodon=(pos:complement(4723615..4723617));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS22845;product=tRNA-Gly NZ_CP085478.1 tRNAscan-SE exon 4723575 4723650 . - . ID=exon-LI478_RS22845-1;Parent=rna-LI478_RS22845;anticodon=(pos:complement(4723615..4723617));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS22845;product=tRNA-Gly NZ_CP085478.1 RefSeq gene 4723945 4724676 . + . ID=gene-LI478_RS22850;Name=LI478_RS22850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS22850 NZ_CP085478.1 Protein Homology CDS 4723945 4724676 . + 0 ID=cds-WP_064153603.1;Parent=gene-LI478_RS22850;Dbxref=Genbank:WP_064153603.1;Name=WP_064153603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224707.1;locus_tag=LI478_RS22850;product=transporter substrate-binding domain-containing protein;protein_id=WP_064153603.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4724720 4725265 . - . ID=gene-LI478_RS22855;Name=orn;gbkey=Gene;gene=orn;gene_biotype=protein_coding;locus_tag=LI478_RS22855 NZ_CP085478.1 Protein Homology CDS 4724720 4725265 . - 0 ID=cds-WP_009309332.1;Parent=gene-LI478_RS22855;Dbxref=Genbank:WP_009309332.1;Name=WP_009309332.1;Ontology_term=GO:0000175,GO:0003676;gbkey=CDS;gene=orn;go_function=3'-5'-exoribonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882950.1;locus_tag=LI478_RS22855;product=oligoribonuclease;protein_id=WP_009309332.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4725360 4726421 . + . ID=gene-LI478_RS22860;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=LI478_RS22860 NZ_CP085478.1 Protein Homology CDS 4725360 4726421 . + 0 ID=cds-WP_002885537.1;Parent=gene-LI478_RS22860;Dbxref=Genbank:WP_002885537.1;Name=WP_002885537.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=rsgA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224705.1;locus_tag=LI478_RS22860;product=small ribosomal subunit biogenesis GTPase RsgA;protein_id=WP_002885537.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4726582 4727544 . + . ID=gene-LI478_RS22865;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=LI478_RS22865 NZ_CP085478.1 Protein Homology CDS 4726582 4727544 . + 0 ID=cds-WP_002885536.1;Parent=gene-LI478_RS22865;Dbxref=Genbank:WP_002885536.1;Name=WP_002885536.1;Note=Phosphatidylserine decarboxylase is synthesized as a single chain precursor. Generation of the pyruvoyl active site from a Ser is coupled to cleavage of a Gly-Ser bond between the larger (beta) and smaller (alpha chains). It is an integral membrane protein.;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;gene=asd;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224704.1;locus_tag=LI478_RS22865;product=archaetidylserine decarboxylase;protein_id=WP_002885536.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4727568 4730897 . + . ID=gene-LI478_RS22870;Name=mscM;gbkey=Gene;gene=mscM;gene_biotype=protein_coding;locus_tag=LI478_RS22870 NZ_CP085478.1 Protein Homology CDS 4727568 4730897 . + 0 ID=cds-WP_004146716.1;Parent=gene-LI478_RS22870;Dbxref=Genbank:WP_004146716.1;Name=WP_004146716.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscM;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224703.1;locus_tag=LI478_RS22870;product=miniconductance mechanosensitive channel MscM;protein_id=WP_004146716.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4730935 4732437 . - . ID=gene-LI478_RS22875;Name=yjeM;gbkey=Gene;gene=yjeM;gene_biotype=protein_coding;locus_tag=LI478_RS22875 NZ_CP085478.1 Protein Homology CDS 4730935 4732437 . - 0 ID=cds-WP_004178330.1;Parent=gene-LI478_RS22875;Dbxref=Genbank:WP_004178330.1;Name=WP_004178330.1;Ontology_term=GO:0022857;gbkey=CDS;gene=yjeM;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224702.1;locus_tag=LI478_RS22875;product=glutamate/gamma-aminobutyrate family transporter YjeM;protein_id=WP_004178330.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4732620 4733597 . - . ID=gene-LI478_RS22880;Name=epmA;gbkey=Gene;gene=epmA;gene_biotype=protein_coding;locus_tag=LI478_RS22880 NZ_CP085478.1 Protein Homology CDS 4732620 4733597 . - 0 ID=cds-WP_004146714.1;Parent=gene-LI478_RS22880;Dbxref=Genbank:WP_004146714.1;Name=WP_004146714.1;Ontology_term=GO:0006418,GO:0004812;gbkey=CDS;gene=epmA;go_function=aminoacyl-tRNA ligase activity|0004812||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000004771.1;locus_tag=LI478_RS22880;product=elongation factor P--(R)-beta-lysine ligase;protein_id=WP_004146714.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4733873 4735663 . + . ID=gene-LI478_RS22885;Name=frdA;gbkey=Gene;gene=frdA;gene_biotype=protein_coding;locus_tag=LI478_RS22885 NZ_CP085478.1 Protein Homology CDS 4733873 4735663 . + 0 ID=cds-WP_048332303.1;Parent=gene-LI478_RS22885;Dbxref=Genbank:WP_048332303.1;Name=WP_048332303.1;Ontology_term=GO:0009061,GO:0022900,GO:0016491,GO:0050660;gbkey=CDS;gene=frdA;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=anaerobic respiration|0009061||IEA,electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224700.1;locus_tag=LI478_RS22885;product=fumarate reductase (quinol) flavoprotein subunit;protein_id=WP_048332303.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4735656 4736390 . + . ID=gene-LI478_RS22890;Name=frdB;gbkey=Gene;gene=frdB;gene_biotype=protein_coding;locus_tag=LI478_RS22890 NZ_CP085478.1 Protein Homology CDS 4735656 4736390 . + 0 ID=cds-WP_032439119.1;Parent=gene-LI478_RS22890;Dbxref=Genbank:WP_032439119.1;Name=WP_032439119.1;gbkey=CDS;gene=frdB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882957.1;locus_tag=LI478_RS22890;product=fumarate reductase iron-sulfur protein;protein_id=WP_032439119.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4736401 4736796 . + . ID=gene-LI478_RS22895;Name=frdC;gbkey=Gene;gene=frdC;gene_biotype=protein_coding;locus_tag=LI478_RS22895 NZ_CP085478.1 Protein Homology CDS 4736401 4736796 . + 0 ID=cds-WP_002885530.1;Parent=gene-LI478_RS22895;Dbxref=Genbank:WP_002885530.1;Name=WP_002885530.1;Ontology_term=GO:0016020;gbkey=CDS;gene=frdC;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224698.1;locus_tag=LI478_RS22895;product=fumarate reductase subunit FrdC;protein_id=WP_002885530.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4736807 4737166 . + . ID=gene-LI478_RS22900;Name=frdD;gbkey=Gene;gene=frdD;gene_biotype=protein_coding;locus_tag=LI478_RS22900 NZ_CP085478.1 Protein Homology CDS 4736807 4737166 . + 0 ID=cds-WP_064153601.1;Parent=gene-LI478_RS22900;Dbxref=Genbank:WP_064153601.1;Name=WP_064153601.1;gbkey=CDS;gene=frdD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224697.1;locus_tag=LI478_RS22900;product=fumarate reductase subunit FrdD;protein_id=WP_064153601.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4737280 4737813 . + . ID=gene-LI478_RS22905;Name=LI478_RS22905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS22905 NZ_CP085478.1 Protein Homology CDS 4737280 4737813 . + 0 ID=cds-WP_040088039.1;Parent=gene-LI478_RS22905;Dbxref=Genbank:WP_040088039.1;Name=WP_040088039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224696.1;locus_tag=LI478_RS22905;product=lipocalin family protein;protein_id=WP_040088039.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4737810 4738127 . - . ID=gene-LI478_RS22910;Name=sugE;gbkey=Gene;gene=sugE;gene_biotype=protein_coding;locus_tag=LI478_RS22910 NZ_CP085478.1 Protein Homology CDS 4737810 4738127 . - 0 ID=cds-WP_002885521.1;Parent=gene-LI478_RS22910;Dbxref=Genbank:WP_002885521.1;Name=WP_002885521.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;gene=sugE;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224695.1;locus_tag=LI478_RS22910;product=quaternary ammonium compound efflux SMR transporter SugE;protein_id=WP_002885521.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4738271 4738417 . - . ID=gene-LI478_RS22915;Name=ecnB;gbkey=Gene;gene=ecnB;gene_biotype=protein_coding;locus_tag=LI478_RS22915 NZ_CP085478.1 Protein Homology CDS 4738271 4738417 . - 0 ID=cds-WP_002885518.1;Parent=gene-LI478_RS22915;Dbxref=Genbank:WP_002885518.1;Name=WP_002885518.1;gbkey=CDS;gene=ecnB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224694.1;locus_tag=LI478_RS22915;product=lipoprotein toxin entericidin B;protein_id=WP_002885518.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4738577 4738708 . - . ID=gene-LI478_RS22920;Name=LI478_RS22920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS22920 NZ_CP085478.1 Protein Homology CDS 4738577 4738708 . - 0 ID=cds-WP_002885511.1;Parent=gene-LI478_RS22920;Dbxref=Genbank:WP_002885511.1;Name=WP_002885511.1;Ontology_term=GO:0009636,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=response to toxic substance|0009636||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224693.1;locus_tag=LI478_RS22920;product=entericidin A/B family lipoprotein;protein_id=WP_002885511.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4738782 4739348 . - . ID=gene-LI478_RS22925;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=LI478_RS22925 NZ_CP085478.1 Protein Homology CDS 4738782 4739348 . - 0 ID=cds-WP_002885506.1;Parent=gene-LI478_RS22925;Dbxref=Genbank:WP_002885506.1;Name=WP_002885506.1;Ontology_term=GO:0006414,GO:0003746,GO:0005737;gbkey=CDS;gene=efp;go_component=cytoplasm|0005737||IEA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004871142.1;locus_tag=LI478_RS22925;product=elongation factor P;protein_id=WP_002885506.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4739390 4740418 . + . ID=gene-LI478_RS22930;Name=epmB;gbkey=Gene;gene=epmB;gene_biotype=protein_coding;locus_tag=LI478_RS22930 NZ_CP085478.1 Protein Homology CDS 4739390 4740418 . + 0 ID=cds-WP_032439117.1;Parent=gene-LI478_RS22930;Dbxref=Genbank:WP_032439117.1;Name=WP_032439117.1;Ontology_term=GO:0072581;gbkey=CDS;gene=epmB;go_process=protein-N6-(L-lysyl)-L-lysine modification to protein-N6-(beta-lysyl)-L-lysine|0072581||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313154.1;locus_tag=LI478_RS22930;product=EF-P beta-lysylation protein EpmB;protein_id=WP_032439117.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4740540 4741184 . - . ID=gene-LI478_RS22935;Name=LI478_RS22935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS22935 NZ_CP085478.1 Protein Homology CDS 4740540 4741184 . - 0 ID=cds-WP_016831379.1;Parent=gene-LI478_RS22935;Dbxref=Genbank:WP_016831379.1;Name=WP_016831379.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224690.1;locus_tag=LI478_RS22935;product=winged helix-turn-helix domain-containing protein;protein_id=WP_016831379.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4741665 4742228 . + . ID=gene-LI478_RS22940;Name=LI478_RS22940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS22940 NZ_CP085478.1 Protein Homology CDS 4741665 4742228 . + 0 ID=cds-WP_004177738.1;Parent=gene-LI478_RS22940;Dbxref=Genbank:WP_004177738.1;Name=WP_004177738.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224689.1;locus_tag=LI478_RS22940;product=fimbrial protein;protein_id=WP_004177738.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4742287 4742973 . + . ID=gene-LI478_RS22945;Name=LI478_RS22945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS22945 NZ_CP085478.1 Protein Homology CDS 4742287 4742973 . + 0 ID=cds-WP_004177740.1;Parent=gene-LI478_RS22945;Dbxref=Genbank:WP_004177740.1;Name=WP_004177740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224688.1;locus_tag=LI478_RS22945;product=molecular chaperone;protein_id=WP_004177740.1;transl_table=11 NZ_CP085478.1 RefSeq pseudogene 4743009 4743260 . + . ID=gene-LI478_RS22950;Name=LI478_RS22950;end_range=4743260,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS22950;partial=true;pseudo=true NZ_CP085478.1 Protein Homology CDS 4743009 4743260 . + 0 ID=cds-LI478_RS22950;Parent=gene-LI478_RS22950;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=4743260,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014908086.1;locus_tag=LI478_RS22950;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP085478.1 RefSeq gene 4743316 4744284 . - . ID=gene-LI478_RS22955;Name=LI478_RS22955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS22955 NZ_CP085478.1 Protein Homology CDS 4743316 4744284 . - 0 ID=cds-WP_004225014.1-11;Parent=gene-LI478_RS22955;Dbxref=Genbank:WP_004225014.1;Name=WP_004225014.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=LI478_RS22955;product=IS5 family transposase;protein_id=WP_004225014.1;transl_table=11 NZ_CP085478.1 RefSeq pseudogene 4744319 4744678 . + . ID=gene-LI478_RS22960;Name=LI478_RS22960;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS22960;partial=true;pseudo=true;start_range=.,4744319 NZ_CP085478.1 Protein Homology CDS 4744319 4744678 . + 0 ID=cds-LI478_RS22960;Parent=gene-LI478_RS22960;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014908086.1;locus_tag=LI478_RS22960;partial=true;product=fimbrial assembly protein;pseudo=true;start_range=.,4744319;transl_table=11 NZ_CP085478.1 RefSeq gene 4744702 4745718 . + . ID=gene-LI478_RS22965;Name=LI478_RS22965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS22965 NZ_CP085478.1 Protein Homology CDS 4744702 4745718 . + 0 ID=cds-WP_004177744.1;Parent=gene-LI478_RS22965;Dbxref=Genbank:WP_004177744.1;Name=WP_004177744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004220000.1;locus_tag=LI478_RS22965;product=fimbrial protein;protein_id=WP_004177744.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4746054 4746404 . + . ID=gene-LI478_RS22970;Name=LI478_RS22970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS22970 NZ_CP085478.1 Protein Homology CDS 4746054 4746404 . + 0 ID=cds-WP_004177746.1;Parent=gene-LI478_RS22970;Dbxref=Genbank:WP_004177746.1;Name=WP_004177746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004177746.1;locus_tag=LI478_RS22970;product=hypothetical protein;protein_id=WP_004177746.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4746508 4747794 . + . ID=gene-LI478_RS22975;Name=LI478_RS22975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS22975 NZ_CP085478.1 Protein Homology CDS 4746508 4747794 . + 0 ID=cds-WP_004177748.1;Parent=gene-LI478_RS22975;Dbxref=Genbank:WP_004177748.1;Name=WP_004177748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224684.1;locus_tag=LI478_RS22975;product=HlyD family secretion protein;protein_id=WP_004177748.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4747787 4749910 . + . ID=gene-LI478_RS22980;Name=LI478_RS22980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS22980 NZ_CP085478.1 Protein Homology CDS 4747787 4749910 . + 0 ID=cds-WP_032439116.1;Parent=gene-LI478_RS22980;Dbxref=Genbank:WP_032439116.1;Name=WP_032439116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224683.1;locus_tag=LI478_RS22980;product=peptidase domain-containing ABC transporter;protein_id=WP_032439116.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4749925 4750788 . + . ID=gene-LI478_RS22985;Name=yjeJ;gbkey=Gene;gene=yjeJ;gene_biotype=protein_coding;locus_tag=LI478_RS22985 NZ_CP085478.1 Protein Homology CDS 4749925 4750788 . + 0 ID=cds-WP_020804230.1;Parent=gene-LI478_RS22985;Dbxref=Genbank:WP_020804230.1;Name=WP_020804230.1;gbkey=CDS;gene=yjeJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224682.1;locus_tag=LI478_RS22985;product=YjeJ family protein;protein_id=WP_020804230.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4750843 4751196 . - . ID=gene-LI478_RS22990;Name=LI478_RS22990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS22990 NZ_CP085478.1 Protein Homology CDS 4750843 4751196 . - 0 ID=cds-WP_004152419.1;Parent=gene-LI478_RS22990;Dbxref=Genbank:WP_004152419.1;Name=WP_004152419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224681.1;locus_tag=LI478_RS22990;product=DUF4156 domain-containing protein;protein_id=WP_004152419.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4751457 4753103 . - . ID=gene-LI478_RS22995;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=LI478_RS22995 NZ_CP085478.1 Protein Homology CDS 4751457 4753103 . - 0 ID=cds-WP_002885441.1;Parent=gene-LI478_RS22995;Dbxref=Genbank:WP_002885441.1;Name=WP_002885441.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds;Ontology_term=GO:0006457,GO:0005515,GO:0016887;gbkey=CDS;gene=groL;go_function=protein binding|0005515||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120975.1;locus_tag=LI478_RS22995;product=chaperonin GroEL;protein_id=WP_002885441.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4753141 4753434 . - . ID=gene-LI478_RS23000;Name=LI478_RS23000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS23000 NZ_CP085478.1 Protein Homology CDS 4753141 4753434 . - 0 ID=cds-WP_004152420.1;Parent=gene-LI478_RS23000;Dbxref=Genbank:WP_004152420.1;Name=WP_004152420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000027827.1;locus_tag=LI478_RS23000;product=co-chaperone GroES;protein_id=WP_004152420.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4753667 4754917 . + . ID=gene-LI478_RS23005;Name=yjeH;gbkey=Gene;gene=yjeH;gene_biotype=protein_coding;locus_tag=LI478_RS23005 NZ_CP085478.1 Protein Homology CDS 4753667 4754917 . + 0 ID=cds-WP_025368533.1;Parent=gene-LI478_RS23005;Dbxref=Genbank:WP_025368533.1;Name=WP_025368533.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yjeH;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224677.1;locus_tag=LI478_RS23005;product=L-methionine/branched-chain amino acid transporter;protein_id=WP_025368533.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4754969 4755445 . - . ID=gene-LI478_RS23010;Name=fxsA;gbkey=Gene;gene=fxsA;gene_biotype=protein_coding;locus_tag=LI478_RS23010 NZ_CP085478.1 Protein Homology CDS 4754969 4755445 . - 0 ID=cds-WP_002885425.1;Parent=gene-LI478_RS23010;Dbxref=Genbank:WP_002885425.1;Name=WP_002885425.1;gbkey=CDS;gene=fxsA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224676.1;locus_tag=LI478_RS23010;product=membrane protein FxsA;protein_id=WP_002885425.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4755783 4757219 . + . ID=gene-LI478_RS23015;Name=aspA;gbkey=Gene;gene=aspA;gene_biotype=protein_coding;locus_tag=LI478_RS23015 NZ_CP085478.1 Protein Homology CDS 4755783 4757219 . + 0 ID=cds-WP_002885424.1;Parent=gene-LI478_RS23015;Dbxref=Genbank:WP_002885424.1;Name=WP_002885424.1;Ontology_term=GO:0006520,GO:0008797;gbkey=CDS;gene=aspA;go_function=aspartate ammonia-lyase activity|0008797||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224674.1;locus_tag=LI478_RS23015;product=aspartate ammonia-lyase;protein_id=WP_002885424.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4757335 4758636 . + . ID=gene-LI478_RS23020;Name=LI478_RS23020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS23020 NZ_CP085478.1 Protein Homology CDS 4757335 4758636 . + 0 ID=cds-WP_002885423.1;Parent=gene-LI478_RS23020;Dbxref=Genbank:WP_002885423.1;Name=WP_002885423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224673.1;locus_tag=LI478_RS23020;product=anaerobic C4-dicarboxylate transporter;protein_id=WP_002885423.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4758761 4759084 . + . ID=gene-LI478_RS23025;Name=cutA;gbkey=Gene;gene=cutA;gene_biotype=protein_coding;locus_tag=LI478_RS23025 NZ_CP085478.1 Protein Homology CDS 4758761 4759084 . + 0 ID=cds-WP_002885422.1;Parent=gene-LI478_RS23025;Dbxref=Genbank:WP_002885422.1;Name=WP_002885422.1;gbkey=CDS;gene=cutA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224672.1;locus_tag=LI478_RS23025;product=divalent cation tolerance protein CutA;protein_id=WP_002885422.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4759060 4760838 . + . ID=gene-LI478_RS23030;Name=LI478_RS23030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS23030 NZ_CP085478.1 Protein Homology CDS 4759060 4760838 . + 0 ID=cds-WP_064153599.1;Parent=gene-LI478_RS23030;Dbxref=Genbank:WP_064153599.1;Name=WP_064153599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224671.1;locus_tag=LI478_RS23030;product=protein-disulfide reductase DsbD;protein_id=WP_064153599.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4760859 4761449 . + . ID=gene-LI478_RS23035;Name=LI478_RS23035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS23035 NZ_CP085478.1 Protein Homology CDS 4760859 4761449 . + 0 ID=cds-WP_002885410.1;Parent=gene-LI478_RS23035;Dbxref=Genbank:WP_002885410.1;Name=WP_002885410.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224670.1;locus_tag=LI478_RS23035;product=transcriptional regulator;protein_id=WP_002885410.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4761517 4763604 . + . ID=gene-LI478_RS23040;Name=LI478_RS23040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS23040 NZ_CP085478.1 Protein Homology CDS 4761517 4763604 . + 0 ID=cds-WP_020325135.1;Parent=gene-LI478_RS23040;Dbxref=Genbank:WP_020325135.1;Name=WP_020325135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224669.1;locus_tag=LI478_RS23040;product=DUF1176 domain-containing protein;protein_id=WP_020325135.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4763720 4763795 . + . ID=gene-LI478_RS23045;Name=LI478_RS23045;gbkey=Gene;gene_biotype=tRNA;locus_tag=LI478_RS23045 NZ_CP085478.1 tRNAscan-SE tRNA 4763720 4763795 . + . ID=rna-LI478_RS23045;Parent=gene-LI478_RS23045;anticodon=(pos:4763753..4763755);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS23045;product=tRNA-Phe NZ_CP085478.1 tRNAscan-SE exon 4763720 4763795 . + . ID=exon-LI478_RS23045-1;Parent=rna-LI478_RS23045;anticodon=(pos:4763753..4763755);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS23045;product=tRNA-Phe NZ_CP085478.1 RefSeq gene 4765075 4765551 . + . ID=gene-LI478_RS23050;Name=LI478_RS23050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS23050 NZ_CP085478.1 Protein Homology CDS 4765075 4765551 . + 0 ID=cds-WP_009484465.1;Parent=gene-LI478_RS23050;Dbxref=Genbank:WP_009484465.1;Name=WP_009484465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009484465.1;locus_tag=LI478_RS23050;product=PAAR domain-containing protein;protein_id=WP_009484465.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4765551 4766786 . + . ID=gene-LI478_RS23055;Name=LI478_RS23055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS23055 NZ_CP085478.1 Protein Homology CDS 4765551 4766786 . + 0 ID=cds-WP_048332297.1;Parent=gene-LI478_RS23055;Dbxref=Genbank:WP_048332297.1;Name=WP_048332297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016532176.1;locus_tag=LI478_RS23055;product=PAAR domain-containing protein;protein_id=WP_048332297.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4766779 4767186 . + . ID=gene-LI478_RS23060;Name=LI478_RS23060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS23060 NZ_CP085478.1 Protein Homology CDS 4766779 4767186 . + 0 ID=cds-WP_009484467.1;Parent=gene-LI478_RS23060;Dbxref=Genbank:WP_009484467.1;Name=WP_009484467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009484467.1;locus_tag=LI478_RS23060;product=DUF943 family protein;protein_id=WP_009484467.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4767522 4767812 . - . ID=gene-LI478_RS23065;Name=LI478_RS23065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS23065 NZ_CP085478.1 Protein Homology CDS 4767522 4767812 . - 0 ID=cds-WP_004153693.1;Parent=gene-LI478_RS23065;Dbxref=Genbank:WP_004153693.1;Name=WP_004153693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224667.1;locus_tag=LI478_RS23065;product=PerC family transcriptional regulator;protein_id=WP_004153693.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4768007 4768129 . + . ID=gene-LI478_RS23070;Name=LI478_RS23070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS23070 NZ_CP085478.1 Protein Homology CDS 4768007 4768129 . + 0 ID=cds-WP_004146686.1;Parent=gene-LI478_RS23070;Dbxref=Genbank:WP_004146686.1;Name=WP_004146686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224666.1;locus_tag=LI478_RS23070;product=hypothetical protein;protein_id=WP_004146686.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4768124 4768690 . - . ID=gene-LI478_RS23075;Name=LI478_RS23075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS23075 NZ_CP085478.1 Protein Homology CDS 4768124 4768690 . - 0 ID=cds-WP_002885396.1;Parent=gene-LI478_RS23075;Dbxref=Genbank:WP_002885396.1;Name=WP_002885396.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224665.1;locus_tag=LI478_RS23075;product=LuxR C-terminal-related transcriptional regulator;protein_id=WP_002885396.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4769324 4771771 . + . ID=gene-LI478_RS23080;Name=pgaA;gbkey=Gene;gene=pgaA;gene_biotype=protein_coding;locus_tag=LI478_RS23080 NZ_CP085478.1 Protein Homology CDS 4769324 4771771 . + 0 ID=cds-WP_074185297.1;Parent=gene-LI478_RS23080;Dbxref=Genbank:WP_074185297.1;Name=WP_074185297.1;Ontology_term=GO:1901515;gbkey=CDS;gene=pgaA;go_function=poly-beta-1%2C6-N-acetyl-D-glucosamine transmembrane transporter activity|1901515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224664.1;locus_tag=LI478_RS23080;product=poly-beta-1%2C6 N-acetyl-D-glucosamine export porin PgaA;protein_id=WP_074185297.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4771780 4773795 . + . ID=gene-LI478_RS23085;Name=pgaB;gbkey=Gene;gene=pgaB;gene_biotype=protein_coding;locus_tag=LI478_RS23085 NZ_CP085478.1 Protein Homology CDS 4771780 4773795 . + 0 ID=cds-WP_064153605.1;Parent=gene-LI478_RS23085;Dbxref=Genbank:WP_064153605.1;Name=WP_064153605.1;gbkey=CDS;gene=pgaB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224663.1;locus_tag=LI478_RS23085;product=poly-beta-1%2C6-N-acetyl-D-glucosamine N-deacetylase PgaB;protein_id=WP_064153605.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4773788 4775116 . + . ID=gene-LI478_RS23090;Name=pgaC;gbkey=Gene;gene=pgaC;gene_biotype=protein_coding;locus_tag=LI478_RS23090 NZ_CP085478.1 Protein Homology CDS 4773788 4775116 . + 0 ID=cds-WP_002885393.1;Parent=gene-LI478_RS23090;Dbxref=Genbank:WP_002885393.1;Name=WP_002885393.1;Ontology_term=GO:0042710,GO:0008375;gbkey=CDS;gene=pgaC;go_function=acetylglucosaminyltransferase activity|0008375||IEA;go_process=biofilm formation|0042710||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224662.1;locus_tag=LI478_RS23090;product=poly-beta-1%2C6-N-acetyl-D-glucosamine synthase;protein_id=WP_002885393.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4775116 4775565 . + . ID=gene-LI478_RS23095;Name=pgaD;gbkey=Gene;gene=pgaD;gene_biotype=protein_coding;locus_tag=LI478_RS23095 NZ_CP085478.1 Protein Homology CDS 4775116 4775565 . + 0 ID=cds-WP_064153595.1;Parent=gene-LI478_RS23095;Dbxref=Genbank:WP_064153595.1;Name=WP_064153595.1;gbkey=CDS;gene=pgaD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224661.1;locus_tag=LI478_RS23095;product=poly-beta-1%2C6-N-acetyl-D-glucosamine biosynthesis protein PgaD;protein_id=WP_064153595.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4775611 4776396 . - . ID=gene-LI478_RS23100;Name=LI478_RS23100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS23100 NZ_CP085478.1 Protein Homology CDS 4775611 4776396 . - 0 ID=cds-WP_002885391.1;Parent=gene-LI478_RS23100;Dbxref=Genbank:WP_002885391.1;Name=WP_002885391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224660.1;locus_tag=LI478_RS23100;product=DsbA family protein;protein_id=WP_002885391.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4776622 4777305 . + . ID=gene-LI478_RS23105;Name=LI478_RS23105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS23105 NZ_CP085478.1 Protein Homology CDS 4776622 4777305 . + 0 ID=cds-WP_064153593.1;Parent=gene-LI478_RS23105;Dbxref=Genbank:WP_064153593.1;Name=WP_064153593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224658.1;locus_tag=LI478_RS23105;product=TerC family protein;protein_id=WP_064153593.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4777262 4777375 . - . ID=gene-LI478_RS23110;Name=LI478_RS23110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS23110 NZ_CP085478.1 Protein Homology CDS 4777262 4777375 . - 0 ID=cds-WP_020802082.1;Parent=gene-LI478_RS23110;Dbxref=Genbank:WP_020802082.1;Name=WP_020802082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224657.1;locus_tag=LI478_RS23110;product=hypothetical protein;protein_id=WP_020802082.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4777451 4778368 . + . ID=gene-LI478_RS23115;Name=cbpA;gbkey=Gene;gene=cbpA;gene_biotype=protein_coding;locus_tag=LI478_RS23115 NZ_CP085478.1 Protein Homology CDS 4777451 4778368 . + 0 ID=cds-WP_004210044.1;Parent=gene-LI478_RS23115;Dbxref=Genbank:WP_004210044.1;Name=WP_004210044.1;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=cbpA;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224656.1;locus_tag=LI478_RS23115;product=curved DNA-binding protein;protein_id=WP_004210044.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4778368 4778673 . + . ID=gene-LI478_RS23120;Name=cbpM;gbkey=Gene;gene=cbpM;gene_biotype=protein_coding;locus_tag=LI478_RS23120 NZ_CP085478.1 Protein Homology CDS 4778368 4778673 . + 0 ID=cds-WP_002885324.1;Parent=gene-LI478_RS23120;Dbxref=Genbank:WP_002885324.1;Name=WP_002885324.1;gbkey=CDS;gene=cbpM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224655.1;locus_tag=LI478_RS23120;product=chaperone modulator CbpM;protein_id=WP_002885324.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4778923 4779294 . - . ID=gene-LI478_RS23125;Name=LI478_RS23125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS23125 NZ_CP085478.1 Protein Homology CDS 4778923 4779294 . - 0 ID=cds-WP_016528813.1;Parent=gene-LI478_RS23125;Dbxref=Genbank:WP_016528813.1;Name=WP_016528813.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224652.1;locus_tag=LI478_RS23125;product=chromosome partitioning protein ParB;protein_id=WP_016528813.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4779304 4780260 . - . ID=gene-LI478_RS23130;Name=parM;gbkey=Gene;gene=parM;gene_biotype=protein_coding;locus_tag=LI478_RS23130 NZ_CP085478.1 Protein Homology CDS 4779304 4780260 . - 0 ID=cds-WP_004177778.1;Parent=gene-LI478_RS23130;Dbxref=Genbank:WP_004177778.1;Name=WP_004177778.1;gbkey=CDS;gene=parM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224651.1;locus_tag=LI478_RS23130;product=plasmid segregation protein ParM;protein_id=WP_004177778.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4780408 4780530 . - . ID=gene-LI478_RS23135;Name=LI478_RS23135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS23135 NZ_CP085478.1 Protein Homology CDS 4780408 4780530 . - 0 ID=cds-WP_064153698.1;Parent=gene-LI478_RS23135;Dbxref=Genbank:WP_064153698.1;Name=WP_064153698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224650.1;locus_tag=LI478_RS23135;product=hypothetical protein;protein_id=WP_064153698.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4780536 4781951 . - . ID=gene-LI478_RS23140;Name=melB;gbkey=Gene;gene=melB;gene_biotype=protein_coding;locus_tag=LI478_RS23140 NZ_CP085478.1 Protein Homology CDS 4780536 4781951 . - 0 ID=cds-WP_019724884.1;Parent=gene-LI478_RS23140;Dbxref=Genbank:WP_019724884.1;Name=WP_019724884.1;Ontology_term=GO:0006814,GO:0008643,GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;gene=melB;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;go_process=sodium ion transport|0006814||IEA,carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224649.1;locus_tag=LI478_RS23140;product=melibiose:sodium transporter MelB;protein_id=WP_019724884.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4782045 4783397 . - . ID=gene-LI478_RS23145;Name=LI478_RS23145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS23145 NZ_CP085478.1 Protein Homology CDS 4782045 4783397 . - 0 ID=cds-WP_023280750.1;Parent=gene-LI478_RS23145;Dbxref=Genbank:WP_023280750.1;Name=WP_023280750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224648.1;locus_tag=LI478_RS23145;product=alpha-glucosidase/alpha-galactosidase;protein_id=WP_023280750.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4783637 4784575 . + . ID=gene-LI478_RS23150;Name=melR;gbkey=Gene;gene=melR;gene_biotype=protein_coding;locus_tag=LI478_RS23150 NZ_CP085478.1 Protein Homology CDS 4783637 4784575 . + 0 ID=cds-WP_002885229.1;Parent=gene-LI478_RS23150;Dbxref=Genbank:WP_002885229.1;Name=WP_002885229.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=melR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224647.1;locus_tag=LI478_RS23150;product=transcriptional regulator MelR;protein_id=WP_002885229.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4784625 4786127 . - . ID=gene-LI478_RS23155;Name=proP;gbkey=Gene;gene=proP;gene_biotype=protein_coding;locus_tag=LI478_RS23155 NZ_CP085478.1 Protein Homology CDS 4784625 4786127 . - 0 ID=cds-WP_004177782.1;Parent=gene-LI478_RS23155;Dbxref=Genbank:WP_004177782.1;Name=WP_004177782.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=proP;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224646.1;locus_tag=LI478_RS23155;product=glycine betaine/L-proline transporter ProP;protein_id=WP_004177782.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4786672 4787007 . + . ID=gene-LI478_RS23160;Name=LI478_RS23160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS23160 NZ_CP085478.1 Protein Homology CDS 4786672 4787007 . + 0 ID=cds-WP_032419881.1;Parent=gene-LI478_RS23160;Dbxref=Genbank:WP_032419881.1;Name=WP_032419881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313117.1;locus_tag=LI478_RS23160;product=zinc ribbon domain-containing protein YjdM;protein_id=WP_032419881.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4787236 4787670 . + . ID=gene-LI478_RS23165;Name=yjdN;gbkey=Gene;gene=yjdN;gene_biotype=protein_coding;locus_tag=LI478_RS23165 NZ_CP085478.1 Protein Homology CDS 4787236 4787670 . + 0 ID=cds-WP_002885221.1;Parent=gene-LI478_RS23165;Dbxref=Genbank:WP_002885221.1;Name=WP_002885221.1;gbkey=CDS;gene=yjdN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004206380.1;locus_tag=LI478_RS23165;product=VOC family metalloprotein YjdN;protein_id=WP_002885221.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4787826 4788551 . + . ID=gene-LI478_RS23170;Name=phnF;gbkey=Gene;gene=phnF;gene_biotype=protein_coding;locus_tag=LI478_RS23170 NZ_CP085478.1 Protein Homology CDS 4787826 4788551 . + 0 ID=cds-WP_002885217.1;Parent=gene-LI478_RS23170;Dbxref=Genbank:WP_002885217.1;Name=WP_002885217.1;gbkey=CDS;gene=phnF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224643.1;locus_tag=LI478_RS23170;product=phosphonate metabolism transcriptional regulator PhnF;protein_id=WP_002885217.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4788552 4789004 . + . ID=gene-LI478_RS23175;Name=phnG;gbkey=Gene;gene=phnG;gene_biotype=protein_coding;locus_tag=LI478_RS23175 NZ_CP085478.1 Protein Homology CDS 4788552 4789004 . + 0 ID=cds-WP_064153699.1;Parent=gene-LI478_RS23175;Dbxref=Genbank:WP_064153699.1;Name=WP_064153699.1;Ontology_term=GO:0015716,GO:0019634;gbkey=CDS;gene=phnG;go_process=organic phosphonate transport|0015716||IEA,organic phosphonate metabolic process|0019634||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224642.1;locus_tag=LI478_RS23175;product=phosphonate C-P lyase system protein PhnG;protein_id=WP_064153699.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4789001 4789585 . + . ID=gene-LI478_RS23180;Name=phnH;gbkey=Gene;gene=phnH;gene_biotype=protein_coding;locus_tag=LI478_RS23180 NZ_CP085478.1 Protein Homology CDS 4789001 4789585 . + 0 ID=cds-WP_004221970.1;Parent=gene-LI478_RS23180;Dbxref=Genbank:WP_004221970.1;Name=WP_004221970.1;Ontology_term=GO:0019634;gbkey=CDS;gene=phnH;go_process=organic phosphonate metabolic process|0019634||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224641.1;locus_tag=LI478_RS23180;product=phosphonate C-P lyase system protein PhnH;protein_id=WP_004221970.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4789586 4790650 . + . ID=gene-LI478_RS23185;Name=LI478_RS23185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS23185 NZ_CP085478.1 Protein Homology CDS 4789586 4790650 . + 0 ID=cds-WP_004210033.1;Parent=gene-LI478_RS23185;Dbxref=Genbank:WP_004210033.1;Name=WP_004210033.1;Ontology_term=GO:0019634;gbkey=CDS;go_process=organic phosphonate metabolic process|0019634||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224640.1;locus_tag=LI478_RS23185;product=carbon-phosphorus lyase complex subunit PhnI;protein_id=WP_004210033.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4790643 4791491 . + . ID=gene-LI478_RS23190;Name=LI478_RS23190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS23190 NZ_CP085478.1 Protein Homology CDS 4790643 4791491 . + 0 ID=cds-WP_002885202.1;Parent=gene-LI478_RS23190;Dbxref=Genbank:WP_002885202.1;Name=WP_002885202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224639.1;locus_tag=LI478_RS23190;product=alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase PhnJ;protein_id=WP_002885202.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4791488 4792246 . + . ID=gene-LI478_RS23195;Name=phnK;gbkey=Gene;gene=phnK;gene_biotype=protein_coding;locus_tag=LI478_RS23195 NZ_CP085478.1 Protein Homology CDS 4791488 4792246 . + 0 ID=cds-WP_004178305.1;Parent=gene-LI478_RS23195;Dbxref=Genbank:WP_004178305.1;Name=WP_004178305.1;Ontology_term=GO:0019634,GO:0018835;gbkey=CDS;gene=phnK;go_function=carbon phosphorus lyase activity|0018835||IEA;go_process=organic phosphonate metabolic process|0019634||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224638.1;locus_tag=LI478_RS23195;product=phosphonate C-P lyase system protein PhnK;protein_id=WP_004178305.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4792354 4793034 . + . ID=gene-LI478_RS23200;Name=phnL;gbkey=Gene;gene=phnL;gene_biotype=protein_coding;locus_tag=LI478_RS23200 NZ_CP085478.1 Protein Homology CDS 4792354 4793034 . + 0 ID=cds-WP_004221959.1;Parent=gene-LI478_RS23200;Dbxref=Genbank:WP_004221959.1;Name=WP_004221959.1;Ontology_term=GO:0019634,GO:0018835;gbkey=CDS;gene=phnL;go_function=carbon phosphorus lyase activity|0018835||IEA;go_process=organic phosphonate metabolic process|0019634||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224637.1;locus_tag=LI478_RS23200;product=phosphonate C-P lyase system protein PhnL;protein_id=WP_004221959.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4793031 4794167 . + . ID=gene-LI478_RS23205;Name=phnM;gbkey=Gene;gene=phnM;gene_biotype=protein_coding;locus_tag=LI478_RS23205 NZ_CP085478.1 Protein Homology CDS 4793031 4794167 . + 0 ID=cds-WP_102007268.1;Parent=gene-LI478_RS23205;Dbxref=Genbank:WP_102007268.1;Name=WP_102007268.1;Ontology_term=GO:0019700,GO:0016810;gbkey=CDS;gene=phnM;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;go_process=organic phosphonate catabolic process|0019700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224636.1;locus_tag=LI478_RS23205;product=alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase;protein_id=WP_102007268.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4794167 4794730 . + . ID=gene-LI478_RS23210;Name=phnN;gbkey=Gene;gene=phnN;gene_biotype=protein_coding;locus_tag=LI478_RS23210 NZ_CP085478.1 Protein Homology CDS 4794167 4794730 . + 0 ID=cds-WP_064153701.1;Parent=gene-LI478_RS23210;Dbxref=Genbank:WP_064153701.1;Name=WP_064153701.1;Ontology_term=GO:0006015,GO:0033863;gbkey=CDS;gene=phnN;go_function=ribose 1%2C5-bisphosphate phosphokinase activity|0033863||IEA;go_process=5-phosphoribose 1-diphosphate biosynthetic process|0006015||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224635.1;locus_tag=LI478_RS23210;product=ribose 1%2C5-bisphosphokinase;protein_id=WP_064153701.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4794746 4795504 . + . ID=gene-LI478_RS23215;Name=phnP;gbkey=Gene;gene=phnP;gene_biotype=protein_coding;locus_tag=LI478_RS23215 NZ_CP085478.1 Protein Homology CDS 4794746 4795504 . + 0 ID=cds-WP_032415853.1;Parent=gene-LI478_RS23215;Dbxref=Genbank:WP_032415853.1;Name=WP_032415853.1;Ontology_term=GO:0019700,GO:0008081;gbkey=CDS;gene=phnP;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=organic phosphonate catabolic process|0019700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224634.1;locus_tag=LI478_RS23215;product=phosphonate metabolism protein PhnP;protein_id=WP_032415853.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4795526 4795879 . - . ID=gene-LI478_RS23220;Name=LI478_RS23220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS23220 NZ_CP085478.1 Protein Homology CDS 4795526 4795879 . - 0 ID=cds-WP_004151729.1;Parent=gene-LI478_RS23220;Dbxref=Genbank:WP_004151729.1;Name=WP_004151729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224633.1;locus_tag=LI478_RS23220;product=membrane protein;protein_id=WP_004151729.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4795950 4798235 . - . ID=gene-LI478_RS23225;Name=LI478_RS23225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS23225 NZ_CP085478.1 Protein Homology CDS 4795950 4798235 . - 0 ID=cds-WP_032415852.1;Parent=gene-LI478_RS23225;Dbxref=Genbank:WP_032415852.1;Name=WP_032415852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224632.1;locus_tag=LI478_RS23225;product=ATP-binding protein;protein_id=WP_032415852.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4798415 4799935 . + . ID=gene-LI478_RS23230;Name=LI478_RS23230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS23230 NZ_CP085478.1 Protein Homology CDS 4798415 4799935 . + 0 ID=cds-WP_032415851.1;Parent=gene-LI478_RS23230;Dbxref=Genbank:WP_032415851.1;Name=WP_032415851.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224631.1;locus_tag=LI478_RS23230;product=sugar ABC transporter ATP-binding protein;protein_id=WP_032415851.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4799932 4800930 . + . ID=gene-LI478_RS23235;Name=LI478_RS23235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS23235 NZ_CP085478.1 Protein Homology CDS 4799932 4800930 . + 0 ID=cds-WP_004186549.1;Parent=gene-LI478_RS23235;Dbxref=Genbank:WP_004186549.1;Name=WP_004186549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224630.1;locus_tag=LI478_RS23235;product=ribose ABC transporter permease;protein_id=WP_004186549.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4800961 4801902 . + . ID=gene-LI478_RS23240;Name=LI478_RS23240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS23240 NZ_CP085478.1 Protein Homology CDS 4800961 4801902 . + 0 ID=cds-WP_002885156.1;Parent=gene-LI478_RS23240;Dbxref=Genbank:WP_002885156.1;Name=WP_002885156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224629.1;locus_tag=LI478_RS23240;product=ABC transporter substrate-binding protein;protein_id=WP_002885156.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4801977 4802984 . + . ID=gene-LI478_RS23245;Name=LI478_RS23245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS23245 NZ_CP085478.1 Protein Homology CDS 4801977 4802984 . + 0 ID=cds-WP_004178300.1;Parent=gene-LI478_RS23245;Dbxref=Genbank:WP_004178300.1;Name=WP_004178300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020316612.1;locus_tag=LI478_RS23245;product=carbohydrate kinase family protein;protein_id=WP_004178300.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4803109 4804026 . - . ID=gene-LI478_RS23250;Name=LI478_RS23250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS23250 NZ_CP085478.1 Protein Homology CDS 4803109 4804026 . - 0 ID=cds-WP_019704723.1;Parent=gene-LI478_RS23250;Dbxref=Genbank:WP_019704723.1;Name=WP_019704723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224627.1;locus_tag=LI478_RS23250;product=nucleotidyl transferase AbiEii/AbiGii toxin family protein;protein_id=WP_019704723.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4804032 4804790 . - . ID=gene-LI478_RS23255;Name=LI478_RS23255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS23255 NZ_CP085478.1 Protein Homology CDS 4804032 4804790 . - 0 ID=cds-WP_004177809.1;Parent=gene-LI478_RS23255;Dbxref=Genbank:WP_004177809.1;Name=WP_004177809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224626.1;locus_tag=LI478_RS23255;product=type IV toxin-antitoxin system AbiEi family antitoxin;protein_id=WP_004177809.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4804876 4805604 . - . ID=gene-LI478_RS23260;Name=LI478_RS23260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS23260 NZ_CP085478.1 Protein Homology CDS 4804876 4805604 . - 0 ID=cds-WP_002885152.1;Parent=gene-LI478_RS23260;Dbxref=Genbank:WP_002885152.1;Name=WP_002885152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224625.1;locus_tag=LI478_RS23260;product=response regulator transcription factor;protein_id=WP_002885152.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4805877 4808024 . + . ID=gene-LI478_RS23265;Name=fdhF;gbkey=Gene;gene=fdhF;gene_biotype=protein_coding;locus_tag=LI478_RS23265 NZ_CP085478.1 Protein Homology CDS 4805877 4808024 . + 0 ID=cds-WP_077598990.1;Parent=gene-LI478_RS23265;Dbxref=Genbank:WP_077598990.1;Name=WP_077598990.1;Ontology_term=GO:0015942,GO:0008863,GO:0009326;gbkey=CDS;gene=fdhF;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463150.1;locus_tag=LI478_RS23265;product=formate dehydrogenase subunit alpha;protein_id=WP_077598990.1;transl_except=(pos:4806294..4806296%2Caa:Sec);transl_table=11 NZ_CP085478.1 RefSeq gene 4808254 4808940 . + . ID=gene-LI478_RS23270;Name=LI478_RS23270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS23270 NZ_CP085478.1 Protein Homology CDS 4808254 4808940 . + 0 ID=cds-WP_004151733.1;Parent=gene-LI478_RS23270;Dbxref=Genbank:WP_004151733.1;Name=WP_004151733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224621.1;locus_tag=LI478_RS23270;product=tetratricopeptide repeat protein;protein_id=WP_004151733.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4808977 4810290 . - . ID=gene-LI478_RS23275;Name=gltP;gbkey=Gene;gene=gltP;gene_biotype=protein_coding;locus_tag=LI478_RS23275 NZ_CP085478.1 Protein Homology CDS 4808977 4810290 . - 0 ID=cds-WP_004146659.1;Parent=gene-LI478_RS23275;Dbxref=Genbank:WP_004146659.1;Name=WP_004146659.1;Ontology_term=GO:0006835,GO:0015293,GO:0016020;gbkey=CDS;gene=gltP;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=dicarboxylic acid transport|0006835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224620.1;locus_tag=LI478_RS23275;product=glutamate/aspartate:proton symporter GltP;protein_id=WP_004146659.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4810402 4810602 . - . ID=gene-LI478_RS23280;Name=LI478_RS23280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS23280 NZ_CP085478.1 Protein Homology CDS 4810402 4810602 . - 0 ID=cds-WP_004226113.1;Parent=gene-LI478_RS23280;Dbxref=Genbank:WP_004226113.1;Name=WP_004226113.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224619.1;locus_tag=LI478_RS23280;product=hypothetical protein;protein_id=WP_004226113.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4810703 4812661 . + . ID=gene-LI478_RS23285;Name=acs;gbkey=Gene;gene=acs;gene_biotype=protein_coding;locus_tag=LI478_RS23285 NZ_CP085478.1 Protein Homology CDS 4810703 4812661 . + 0 ID=cds-WP_002885145.1;Parent=gene-LI478_RS23285;Dbxref=Genbank:WP_002885145.1;Name=WP_002885145.1;Ontology_term=GO:0019427,GO:0003987;gbkey=CDS;gene=acs;go_function=acetate-CoA ligase activity|0003987||IEA;go_process=acetyl-CoA biosynthetic process from acetate|0019427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224618.1;locus_tag=LI478_RS23285;product=acetate--CoA ligase;protein_id=WP_002885145.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4812845 4813156 . + . ID=gene-LI478_RS23290;Name=LI478_RS23290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS23290 NZ_CP085478.1 Protein Homology CDS 4812845 4813156 . + 0 ID=cds-WP_004177812.1;Parent=gene-LI478_RS23290;Dbxref=Genbank:WP_004177812.1;Name=WP_004177812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224617.1;locus_tag=LI478_RS23290;product=DUF485 domain-containing protein;protein_id=WP_004177812.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4813156 4814808 . + . ID=gene-LI478_RS23295;Name=actP;gbkey=Gene;gene=actP;gene_biotype=protein_coding;locus_tag=LI478_RS23295 NZ_CP085478.1 Protein Homology CDS 4813156 4814808 . + 0 ID=cds-WP_024623073.1;Parent=gene-LI478_RS23295;Dbxref=Genbank:WP_024623073.1;Name=WP_024623073.1;Ontology_term=GO:0006814,GO:0015370,GO:0031402,GO:0005886;gbkey=CDS;gene=actP;go_component=plasma membrane|0005886||IEA;go_function=solute:sodium symporter activity|0015370||IEA,sodium ion binding|0031402||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463138.1;locus_tag=LI478_RS23295;product=cation/acetate symporter ActP;protein_id=WP_024623073.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4814855 4815952 . - . ID=gene-LI478_RS23300;Name=LI478_RS23300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS23300 NZ_CP085478.1 Protein Homology CDS 4814855 4815952 . - 0 ID=cds-WP_002885139.1;Parent=gene-LI478_RS23300;Dbxref=Genbank:WP_002885139.1;Name=WP_002885139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224615.1;locus_tag=LI478_RS23300;product=type 1 fimbrial protein;protein_id=WP_002885139.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4815972 4816520 . - . ID=gene-LI478_RS23305;Name=LI478_RS23305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS23305 NZ_CP085478.1 Protein Homology CDS 4815972 4816520 . - 0 ID=cds-WP_004151734.1;Parent=gene-LI478_RS23305;Dbxref=Genbank:WP_004151734.1;Name=WP_004151734.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004151734.1;locus_tag=LI478_RS23305;product=fimbrial protein;protein_id=WP_004151734.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4816556 4819135 . - . ID=gene-LI478_RS23310;Name=LI478_RS23310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS23310 NZ_CP085478.1 Protein Homology CDS 4816556 4819135 . - 0 ID=cds-WP_023288133.1;Parent=gene-LI478_RS23310;Dbxref=Genbank:WP_023288133.1;Name=WP_023288133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004178294.1;locus_tag=LI478_RS23310;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_023288133.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4819089 4819778 . - . ID=gene-LI478_RS23315;Name=LI478_RS23315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS23315 NZ_CP085478.1 Protein Homology CDS 4819089 4819778 . - 0 ID=cds-WP_087847632.1;Parent=gene-LI478_RS23315;Dbxref=Genbank:WP_087847632.1;Name=WP_087847632.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224612.1;locus_tag=LI478_RS23315;product=fimbrial assembly chaperone;protein_id=WP_087847632.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4819839 4820396 . - . ID=gene-LI478_RS23320;Name=LI478_RS23320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS23320 NZ_CP085478.1 Protein Homology CDS 4819839 4820396 . - 0 ID=cds-WP_004192602.1;Parent=gene-LI478_RS23320;Dbxref=Genbank:WP_004192602.1;Name=WP_004192602.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224611.1;locus_tag=LI478_RS23320;product=fimbrial protein;protein_id=WP_004192602.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4820907 4821596 . - . ID=gene-LI478_RS23325;Name=LI478_RS23325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS23325 NZ_CP085478.1 Protein Homology CDS 4820907 4821596 . - 0 ID=cds-WP_002885088.1;Parent=gene-LI478_RS23325;Dbxref=Genbank:WP_002885088.1;Name=WP_002885088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224609.1;locus_tag=LI478_RS23325;product=LrgB family protein;protein_id=WP_002885088.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4821593 4822000 . - . ID=gene-LI478_RS23330;Name=LI478_RS23330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS23330 NZ_CP085478.1 Protein Homology CDS 4821593 4822000 . - 0 ID=cds-WP_002885086.1;Parent=gene-LI478_RS23330;Dbxref=Genbank:WP_002885086.1;Name=WP_002885086.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224608.1;locus_tag=LI478_RS23330;product=CidA/LrgA family protein;protein_id=WP_002885086.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4822106 4822987 . + . ID=gene-LI478_RS23335;Name=LI478_RS23335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS23335 NZ_CP085478.1 Protein Homology CDS 4822106 4822987 . + 0 ID=cds-WP_048299747.1;Parent=gene-LI478_RS23335;Dbxref=Genbank:WP_048299747.1;Name=WP_048299747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224607.1;locus_tag=LI478_RS23335;product=LysR family transcriptional regulator;protein_id=WP_048299747.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4823150 4824796 . - . ID=gene-LI478_RS23340;Name=LI478_RS23340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS23340 NZ_CP085478.1 Protein Homology CDS 4823150 4824796 . - 0 ID=cds-WP_002885082.1;Parent=gene-LI478_RS23340;Dbxref=Genbank:WP_002885082.1;Name=WP_002885082.1;Ontology_term=GO:0006814,GO:0006885,GO:1902600,GO:0015385;gbkey=CDS;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,regulation of pH|0006885||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224606.1;locus_tag=LI478_RS23340;product=Na+/H+ antiporter;protein_id=WP_002885082.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4824944 4826293 . - . ID=gene-LI478_RS23345;Name=LI478_RS23345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS23345 NZ_CP085478.1 Protein Homology CDS 4824944 4826293 . - 0 ID=cds-WP_002885079.1;Parent=gene-LI478_RS23345;Dbxref=Genbank:WP_002885079.1;Name=WP_002885079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132609.1;locus_tag=LI478_RS23345;product=NCS2 family permease;protein_id=WP_002885079.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4826682 4827350 . - . ID=gene-LI478_RS23350;Name=LI478_RS23350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS23350 NZ_CP085478.1 Protein Homology CDS 4826682 4827350 . - 0 ID=cds-WP_002885078.1;Parent=gene-LI478_RS23350;Dbxref=Genbank:WP_002885078.1;Name=WP_002885078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224604.1;locus_tag=LI478_RS23350;product=glutathione S-transferase;protein_id=WP_002885078.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4827610 4828068 . - . ID=gene-LI478_RS23355;Name=soxR;gbkey=Gene;gene=soxR;gene_biotype=protein_coding;locus_tag=LI478_RS23355 NZ_CP085478.1 Protein Homology CDS 4827610 4828068 . - 0 ID=cds-WP_002885077.1;Parent=gene-LI478_RS23355;Dbxref=Genbank:WP_002885077.1;Name=WP_002885077.1;Ontology_term=GO:0006355,GO:0006979,GO:0003677,GO:0003700,GO:0051537;gbkey=CDS;gene=soxR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224603.1;locus_tag=LI478_RS23355;product=redox-sensitive transcriptional activator SoxR;protein_id=WP_002885077.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4828153 4828482 . + . ID=gene-LI478_RS23360;Name=soxS;gbkey=Gene;gene=soxS;gene_biotype=protein_coding;locus_tag=LI478_RS23360 NZ_CP085478.1 Protein Homology CDS 4828153 4828482 . + 0 ID=cds-WP_004151738.1;Parent=gene-LI478_RS23360;Dbxref=Genbank:WP_004151738.1;Name=WP_004151738.1;gbkey=CDS;gene=soxS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224602.1;locus_tag=LI478_RS23360;product=superoxide response transcriptional regulator SoxS;protein_id=WP_004151738.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4828467 4830071 . - . ID=gene-LI478_RS23365;Name=LI478_RS23365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS23365 NZ_CP085478.1 Protein Homology CDS 4828467 4830071 . - 0 ID=cds-WP_020803550.1;Parent=gene-LI478_RS23365;Dbxref=Genbank:WP_020803550.1;Name=WP_020803550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224601.1;locus_tag=LI478_RS23365;product=EAL domain-containing protein;protein_id=WP_020803550.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4830578 4830859 . + . ID=gene-LI478_RS23370;Name=LI478_RS23370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS23370 NZ_CP085478.1 Protein Homology CDS 4830578 4830859 . + 0 ID=cds-WP_004177826.1;Parent=gene-LI478_RS23370;Dbxref=Genbank:WP_004177826.1;Name=WP_004177826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224600.1;locus_tag=LI478_RS23370;product=YjcB family protein;protein_id=WP_004177826.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4830906 4831763 . - . ID=gene-LI478_RS23375;Name=LI478_RS23375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS23375 NZ_CP085478.1 Protein Homology CDS 4830906 4831763 . - 0 ID=cds-WP_004872930.1;Parent=gene-LI478_RS23375;Dbxref=Genbank:WP_004872930.1;Name=WP_004872930.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224599.1;locus_tag=LI478_RS23375;product=ABC transporter permease subunit;protein_id=WP_004872930.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4831760 4832593 . - . ID=gene-LI478_RS23380;Name=LI478_RS23380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS23380 NZ_CP085478.1 Protein Homology CDS 4831760 4832593 . - 0 ID=cds-WP_004177833.1;Parent=gene-LI478_RS23380;Dbxref=Genbank:WP_004177833.1;Name=WP_004177833.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224598.1;locus_tag=LI478_RS23380;product=ABC transporter permease subunit;protein_id=WP_004177833.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4832654 4833793 . - . ID=gene-LI478_RS23385;Name=LI478_RS23385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS23385 NZ_CP085478.1 Protein Homology CDS 4832654 4833793 . - 0 ID=cds-WP_004177835.1;Parent=gene-LI478_RS23385;Dbxref=Genbank:WP_004177835.1;Name=WP_004177835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224597.1;locus_tag=LI478_RS23385;product=extracellular solute-binding protein;protein_id=WP_004177835.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4833823 4834854 . - . ID=gene-LI478_RS23390;Name=LI478_RS23390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS23390 NZ_CP085478.1 Protein Homology CDS 4833823 4834854 . - 0 ID=cds-WP_032415926.1;Parent=gene-LI478_RS23390;Dbxref=Genbank:WP_032415926.1;Name=WP_032415926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012543175.1;locus_tag=LI478_RS23390;product=ABC transporter ATP-binding protein;protein_id=WP_032415926.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4835030 4835788 . + . ID=gene-LI478_RS23395;Name=LI478_RS23395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS23395 NZ_CP085478.1 Protein Homology CDS 4835030 4835788 . + 0 ID=cds-WP_072143352.1;Parent=gene-LI478_RS23395;Dbxref=Genbank:WP_072143352.1;Name=WP_072143352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224595.1;locus_tag=LI478_RS23395;product=ribonuclease Z;protein_id=WP_072143352.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4835785 4836798 . + . ID=gene-LI478_RS23400;Name=LI478_RS23400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS23400 NZ_CP085478.1 Protein Homology CDS 4835785 4836798 . + 0 ID=cds-WP_002885046.1;Parent=gene-LI478_RS23400;Dbxref=Genbank:WP_002885046.1;Name=WP_002885046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224594.1;locus_tag=LI478_RS23400;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_002885046.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4836809 4837570 . + . ID=gene-LI478_RS23405;Name=LI478_RS23405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS23405 NZ_CP085478.1 Protein Homology CDS 4836809 4837570 . + 0 ID=cds-WP_048332285.1;Parent=gene-LI478_RS23405;Dbxref=Genbank:WP_048332285.1;Name=WP_048332285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224593.1;locus_tag=LI478_RS23405;product=inositol monophosphatase;protein_id=WP_048332285.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4837609 4837962 . - . ID=gene-LI478_RS23410;Name=iraM;gbkey=Gene;gene=iraM;gene_biotype=protein_coding;locus_tag=LI478_RS23410 NZ_CP085478.1 Protein Homology CDS 4837609 4837962 . - 0 ID=cds-WP_002885039.1;Parent=gene-LI478_RS23410;Dbxref=Genbank:WP_002885039.1;Name=WP_002885039.1;gbkey=CDS;gene=iraM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224592.1;locus_tag=LI478_RS23410;product=anti-adapter protein IraM;protein_id=WP_002885039.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4838514 4840937 . - . ID=gene-LI478_RS23415;Name=bamA;gbkey=Gene;gene=bamA;gene_biotype=protein_coding;locus_tag=LI478_RS23415 NZ_CP085478.1 Protein Homology CDS 4838514 4840937 . - 0 ID=cds-WP_064153651.1;Parent=gene-LI478_RS23415;Dbxref=Genbank:WP_064153651.1;Name=WP_064153651.1;Ontology_term=GO:0009279;gbkey=CDS;gene=bamA;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224591.1;locus_tag=LI478_RS23415;product=outer membrane protein assembly factor BamA;protein_id=WP_064153651.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4840959 4841189 . + . ID=gene-LI478_RS23420;Name=LI478_RS23420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS23420 NZ_CP085478.1 GeneMarkS-2+ CDS 4840959 4841189 . + 0 ID=cds-WP_064153650.1;Parent=gene-LI478_RS23420;Dbxref=Genbank:WP_064153650.1;Name=WP_064153650.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LI478_RS23420;product=hypothetical protein;protein_id=WP_064153650.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4841563 4843323 . + . ID=gene-LI478_RS23425;Name=LI478_RS23425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS23425 NZ_CP085478.1 Protein Homology CDS 4841563 4843323 . + 0 ID=cds-WP_064153649.1;Parent=gene-LI478_RS23425;Dbxref=Genbank:WP_064153649.1;Name=WP_064153649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224588.1;locus_tag=LI478_RS23425;product=tannase/feruloyl esterase family alpha/beta hydrolase;protein_id=WP_064153649.1;transl_table=11 NZ_CP085478.1 RefSeq pseudogene 4843357 4843726 . + . ID=gene-LI478_RS23430;Name=LI478_RS23430;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS23430;pseudo=true NZ_CP085478.1 Protein Homology CDS 4843357 4843726 . + 0 ID=cds-LI478_RS23430;Parent=gene-LI478_RS23430;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224587.1;locus_tag=LI478_RS23430;product=helix-turn-helix transcriptional regulator;pseudo=true;transl_table=11 NZ_CP085478.1 RefSeq gene 4843990 4846248 . - . ID=gene-LI478_RS23435;Name=LI478_RS23435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS23435 NZ_CP085478.1 Protein Homology CDS 4843990 4846248 . - 0 ID=cds-WP_004177845.1;Parent=gene-LI478_RS23435;Dbxref=Genbank:WP_004177845.1;Name=WP_004177845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224586.1;locus_tag=LI478_RS23435;product=TonB-dependent siderophore receptor;protein_id=WP_004177845.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4846833 4848413 . + . ID=gene-LI478_RS23440;Name=LI478_RS23440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS23440 NZ_CP085478.1 Protein Homology CDS 4846833 4848413 . + 0 ID=cds-WP_064153648.1;Parent=gene-LI478_RS23440;Dbxref=Genbank:WP_064153648.1;Name=WP_064153648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224584.1;locus_tag=LI478_RS23440;product=lytic transglycosylase F;protein_id=WP_064153648.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4848538 4849062 . - . ID=gene-LI478_RS23445;Name=ssb1;gbkey=Gene;gene=ssb1;gene_biotype=protein_coding;locus_tag=LI478_RS23445 NZ_CP085478.1 Protein Homology CDS 4848538 4849062 . - 0 ID=cds-WP_004151744.1;Parent=gene-LI478_RS23445;Dbxref=Genbank:WP_004151744.1;Name=WP_004151744.1;gbkey=CDS;gene=ssb1;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224583.1;locus_tag=LI478_RS23445;product=single-stranded DNA-binding protein SSB1;protein_id=WP_004151744.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4849314 4852139 . + . ID=gene-LI478_RS23450;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=LI478_RS23450 NZ_CP085478.1 Protein Homology CDS 4849314 4852139 . + 0 ID=cds-WP_004146620.1;Parent=gene-LI478_RS23450;Dbxref=Genbank:WP_004146620.1;Name=WP_004146620.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;gene=uvrA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224582.1;locus_tag=LI478_RS23450;product=excinuclease ABC subunit UvrA;protein_id=WP_004146620.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4852140 4852496 . - . ID=gene-LI478_RS23455;Name=LI478_RS23455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS23455 NZ_CP085478.1 Protein Homology CDS 4852140 4852496 . - 0 ID=cds-WP_002884953.1;Parent=gene-LI478_RS23455;Dbxref=Genbank:WP_002884953.1;Name=WP_002884953.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224581.1;locus_tag=LI478_RS23455;product=MmcQ/YjbR family DNA-binding protein;protein_id=WP_002884953.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4852500 4852916 . - . ID=gene-LI478_RS23460;Name=LI478_RS23460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS23460 NZ_CP085478.1 Protein Homology CDS 4852500 4852916 . - 0 ID=cds-WP_064153647.1;Parent=gene-LI478_RS23460;Dbxref=Genbank:WP_064153647.1;Name=WP_064153647.1;Ontology_term=GO:0008150,GO:0003824,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=catalytic activity|0003824||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224580.1;locus_tag=LI478_RS23460;product=secondary thiamine-phosphate synthase enzyme YjbQ;protein_id=WP_064153647.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4853047 4853760 . - . ID=gene-LI478_RS23465;Name=aphA;gbkey=Gene;gene=aphA;gene_biotype=protein_coding;locus_tag=LI478_RS23465 NZ_CP085478.1 Protein Homology CDS 4853047 4853760 . - 0 ID=cds-WP_004151745.1;Parent=gene-LI478_RS23465;Dbxref=Genbank:WP_004151745.1;Name=WP_004151745.1;Ontology_term=GO:0003993;gbkey=CDS;gene=aphA;go_function=acid phosphatase activity|0003993||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224579.1;locus_tag=LI478_RS23465;product=acid phosphatase AphA;protein_id=WP_004151745.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4853951 4855144 . - . ID=gene-LI478_RS23470;Name=tyrB;gbkey=Gene;gene=tyrB;gene_biotype=protein_coding;locus_tag=LI478_RS23470 NZ_CP085478.1 Protein Homology CDS 4853951 4855144 . - 0 ID=cds-WP_002884946.1;Parent=gene-LI478_RS23470;Dbxref=Genbank:WP_002884946.1;Name=WP_002884946.1;gbkey=CDS;gene=tyrB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224578.1;locus_tag=LI478_RS23470;product=aromatic amino acid transaminase;protein_id=WP_002884946.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4855321 4856400 . - . ID=gene-LI478_RS23475;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=LI478_RS23475 NZ_CP085478.1 Protein Homology CDS 4855321 4856400 . - 0 ID=cds-WP_002884943.1;Parent=gene-LI478_RS23475;Dbxref=Genbank:WP_002884943.1;Name=WP_002884943.1;Ontology_term=GO:0009252,GO:0008784;gbkey=CDS;gene=alr;go_function=alanine racemase activity|0008784||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224577.1;locus_tag=LI478_RS23475;product=alanine racemase;protein_id=WP_002884943.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4856432 4857847 . - . ID=gene-LI478_RS23480;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;locus_tag=LI478_RS23480 NZ_CP085478.1 Protein Homology CDS 4856432 4857847 . - 0 ID=cds-WP_002884942.1;Parent=gene-LI478_RS23480;Dbxref=Genbank:WP_002884942.1;Name=WP_002884942.1;gbkey=CDS;gene=dnaB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224576.1;locus_tag=LI478_RS23480;product=replicative DNA helicase;protein_id=WP_002884942.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4858017 4859000 . + . ID=gene-LI478_RS23485;Name=LI478_RS23485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS23485 NZ_CP085478.1 Protein Homology CDS 4858017 4859000 . + 0 ID=cds-WP_002884941.1;Parent=gene-LI478_RS23485;Dbxref=Genbank:WP_002884941.1;Name=WP_002884941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224575.1;locus_tag=LI478_RS23485;product=quinone oxidoreductase;protein_id=WP_002884941.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4859183 4859425 . - . ID=gene-LI478_RS23490;Name=pspG;gbkey=Gene;gene=pspG;gene_biotype=protein_coding;locus_tag=LI478_RS23490 NZ_CP085478.1 Protein Homology CDS 4859183 4859425 . - 0 ID=cds-WP_009484997.1;Parent=gene-LI478_RS23490;Dbxref=Genbank:WP_009484997.1;Name=WP_009484997.1;gbkey=CDS;gene=pspG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224574.1;locus_tag=LI478_RS23490;product=envelope stress response protein PspG;protein_id=WP_009484997.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4859565 4860563 . - . ID=gene-LI478_RS23495;Name=dusA;gbkey=Gene;gene=dusA;gene_biotype=protein_coding;locus_tag=LI478_RS23495 NZ_CP085478.1 Protein Homology CDS 4859565 4860563 . - 0 ID=cds-WP_032415844.1;Parent=gene-LI478_RS23495;Dbxref=Genbank:WP_032415844.1;Name=WP_032415844.1;Ontology_term=GO:0002943,GO:0017150,GO:0050660;gbkey=CDS;gene=dusA;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA dihydrouridine synthesis|0002943||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224573.1;locus_tag=LI478_RS23495;product=tRNA dihydrouridine(20/20a) synthase DusA;protein_id=WP_032415844.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4860664 4861152 . - . ID=gene-LI478_RS23500;Name=LI478_RS23500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS23500 NZ_CP085478.1 Protein Homology CDS 4860664 4861152 . - 0 ID=cds-WP_002884935.1;Parent=gene-LI478_RS23500;Dbxref=Genbank:WP_002884935.1;Name=WP_002884935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224572.1;locus_tag=LI478_RS23500;product=cupin domain-containing protein;protein_id=WP_002884935.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4861402 4861917 . + . ID=gene-LI478_RS23505;Name=zur;gbkey=Gene;gene=zur;gene_biotype=protein_coding;locus_tag=LI478_RS23505 NZ_CP085478.1 Protein Homology CDS 4861402 4861917 . + 0 ID=cds-WP_002884931.1;Parent=gene-LI478_RS23505;Dbxref=Genbank:WP_002884931.1;Name=WP_002884931.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=zur;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224570.1;locus_tag=LI478_RS23505;product=zinc uptake transcriptional repressor Zur;protein_id=WP_002884931.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4862013 4862222 . - . ID=gene-LI478_RS23510;Name=LI478_RS23510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS23510 NZ_CP085478.1 Protein Homology CDS 4862013 4862222 . - 0 ID=cds-WP_004151747.1;Parent=gene-LI478_RS23510;Dbxref=Genbank:WP_004151747.1;Name=WP_004151747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224569.1;locus_tag=LI478_RS23510;product=CsbD family protein;protein_id=WP_004151747.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4862288 4862437 . + . ID=gene-LI478_RS23515;Name=LI478_RS23515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS23515 NZ_CP085478.1 Protein Homology CDS 4862288 4862437 . + 0 ID=cds-WP_004219133.1;Parent=gene-LI478_RS23515;Dbxref=Genbank:WP_004219133.1;Name=WP_004219133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224568.1;locus_tag=LI478_RS23515;product=hypothetical protein;protein_id=WP_004219133.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4862457 4863773 . - . ID=gene-LI478_RS23520;Name=dinF;gbkey=Gene;gene=dinF;gene_biotype=protein_coding;locus_tag=LI478_RS23520 NZ_CP085478.1 Protein Homology CDS 4862457 4863773 . - 0 ID=cds-WP_004151748.1;Parent=gene-LI478_RS23520;Dbxref=Genbank:WP_004151748.1;Name=WP_004151748.1;Ontology_term=GO:0055085,GO:0015297,GO:0042910,GO:0016020;gbkey=CDS;gene=dinF;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA,xenobiotic transmembrane transporter activity|0042910||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224567.1;locus_tag=LI478_RS23520;product=MATE family efflux transporter DinF;protein_id=WP_004151748.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4863843 4864451 . - . ID=gene-LI478_RS23525;Name=lexA;gbkey=Gene;gene=lexA;gene_biotype=protein_coding;locus_tag=LI478_RS23525 NZ_CP085478.1 Protein Homology CDS 4863843 4864451 . - 0 ID=cds-WP_002884822.1;Parent=gene-LI478_RS23525;Dbxref=Genbank:WP_002884822.1;Name=WP_002884822.1;Ontology_term=GO:0006282,GO:0006355,GO:0004252;gbkey=CDS;gene=lexA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=regulation of DNA repair|0006282||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000646075.1;locus_tag=LI478_RS23525;product=transcriptional repressor LexA;protein_id=WP_002884822.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4864574 4864942 . - . ID=gene-LI478_RS23530;Name=LI478_RS23530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS23530 NZ_CP085478.1 Protein Homology CDS 4864574 4864942 . - 0 ID=cds-WP_002884819.1;Parent=gene-LI478_RS23530;Dbxref=Genbank:WP_002884819.1;Name=WP_002884819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224565.1;locus_tag=LI478_RS23530;product=diacylglycerol kinase;protein_id=WP_002884819.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4865071 4867494 . + . ID=gene-LI478_RS23535;Name=plsB;gbkey=Gene;gene=plsB;gene_biotype=protein_coding;locus_tag=LI478_RS23535 NZ_CP085478.1 Protein Homology CDS 4865071 4867494 . + 0 ID=cds-WP_004178269.1;Parent=gene-LI478_RS23535;Dbxref=Genbank:WP_004178269.1;Name=WP_004178269.1;Ontology_term=GO:0008654,GO:0004366;gbkey=CDS;gene=plsB;go_function=glycerol-3-phosphate O-acyltransferase activity|0004366||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224564.1;locus_tag=LI478_RS23535;product=glycerol-3-phosphate 1-O-acyltransferase PlsB;protein_id=WP_004178269.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4867543 4868409 . - . ID=gene-LI478_RS23540;Name=ubiA;gbkey=Gene;gene=ubiA;gene_biotype=protein_coding;locus_tag=LI478_RS23540 NZ_CP085478.1 Protein Homology CDS 4867543 4868409 . - 0 ID=cds-WP_032415843.1;Parent=gene-LI478_RS23540;Dbxref=Genbank:WP_032415843.1;Name=WP_032415843.1;Ontology_term=GO:0006744,GO:0008412;gbkey=CDS;gene=ubiA;go_function=4-hydroxybenzoate octaprenyltransferase activity|0008412||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224563.1;locus_tag=LI478_RS23540;product=4-hydroxybenzoate octaprenyltransferase;protein_id=WP_032415843.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4868422 4868919 . - . ID=gene-LI478_RS23545;Name=ubiC;gbkey=Gene;gene=ubiC;gene_biotype=protein_coding;locus_tag=LI478_RS23545 NZ_CP085478.1 Protein Homology CDS 4868422 4868919 . - 0 ID=cds-WP_002884807.1;Parent=gene-LI478_RS23545;Dbxref=Genbank:WP_002884807.1;Name=WP_002884807.1;Ontology_term=GO:0008813;gbkey=CDS;gene=ubiC;go_function=chorismate lyase activity|0008813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224562.1;locus_tag=LI478_RS23545;product=chorismate lyase;protein_id=WP_002884807.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4869107 4870030 . - . ID=gene-LI478_RS23550;Name=malM;gbkey=Gene;gene=malM;gene_biotype=protein_coding;locus_tag=LI478_RS23550 NZ_CP085478.1 Protein Homology CDS 4869107 4870030 . - 0 ID=cds-WP_004151749.1;Parent=gene-LI478_RS23550;Dbxref=Genbank:WP_004151749.1;Name=WP_004151749.1;Ontology_term=GO:0008643,GO:0042597;gbkey=CDS;gene=malM;go_component=periplasmic space|0042597||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224561.1;locus_tag=LI478_RS23550;product=maltose operon protein MalM;protein_id=WP_004151749.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4870145 4871434 . - . ID=gene-LI478_RS23555;Name=LI478_RS23555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS23555 NZ_CP085478.1 Protein Homology CDS 4870145 4871434 . - 0 ID=cds-WP_002884747.1;Parent=gene-LI478_RS23555;Dbxref=Genbank:WP_002884747.1;Name=WP_002884747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224560.1;locus_tag=LI478_RS23555;product=maltoporin;protein_id=WP_002884747.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4871518 4872627 . - . ID=gene-LI478_RS23560;Name=malK;gbkey=Gene;gene=malK;gene_biotype=protein_coding;locus_tag=LI478_RS23560 NZ_CP085478.1 Protein Homology CDS 4871518 4872627 . - 0 ID=cds-WP_002884743.1;Parent=gene-LI478_RS23560;Dbxref=Genbank:WP_002884743.1;Name=WP_002884743.1;Ontology_term=GO:0008643,GO:0055085,GO:0005524,GO:0140359,GO:0043190;gbkey=CDS;gene=malK;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011915502.1;locus_tag=LI478_RS23560;product=maltose/maltodextrin ABC transporter ATP-binding protein MalK;protein_id=WP_002884743.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4872998 4874188 . + . ID=gene-LI478_RS23565;Name=malE;gbkey=Gene;gene=malE;gene_biotype=protein_coding;locus_tag=LI478_RS23565 NZ_CP085478.1 Protein Homology CDS 4872998 4874188 . + 0 ID=cds-WP_002884740.1;Parent=gene-LI478_RS23565;Dbxref=Genbank:WP_002884740.1;Name=WP_002884740.1;Ontology_term=GO:0008643,GO:0055085,GO:0015144;gbkey=CDS;gene=malE;go_function=carbohydrate transmembrane transporter activity|0015144||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000695396.1;locus_tag=LI478_RS23565;product=maltose/maltodextrin ABC transporter substrate-binding protein MalE;protein_id=WP_002884740.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4874306 4875850 . + . ID=gene-LI478_RS23570;Name=malF;gbkey=Gene;gene=malF;gene_biotype=protein_coding;locus_tag=LI478_RS23570 NZ_CP085478.1 Protein Homology CDS 4874306 4875850 . + 0 ID=cds-WP_002884726.1;Parent=gene-LI478_RS23570;Dbxref=Genbank:WP_002884726.1;Name=WP_002884726.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=malF;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224557.1;locus_tag=LI478_RS23570;product=maltose ABC transporter permease MalF;protein_id=WP_002884726.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4875865 4876755 . + . ID=gene-LI478_RS23575;Name=malG;gbkey=Gene;gene=malG;gene_biotype=protein_coding;locus_tag=LI478_RS23575 NZ_CP085478.1 Protein Homology CDS 4875865 4876755 . + 0 ID=cds-WP_002884725.1;Parent=gene-LI478_RS23575;Dbxref=Genbank:WP_002884725.1;Name=WP_002884725.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=malG;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224556.1;locus_tag=LI478_RS23575;product=maltose ABC transporter permease MalG;protein_id=WP_002884725.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4876947 4877357 . - . ID=gene-LI478_RS23580;Name=psiE;gbkey=Gene;gene=psiE;gene_biotype=protein_coding;locus_tag=LI478_RS23580 NZ_CP085478.1 Protein Homology CDS 4876947 4877357 . - 0 ID=cds-WP_002884721.1;Parent=gene-LI478_RS23580;Dbxref=Genbank:WP_002884721.1;Name=WP_002884721.1;gbkey=CDS;gene=psiE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224555.1;locus_tag=LI478_RS23580;product=phosphate-starvation-inducible protein PsiE;protein_id=WP_002884721.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4877731 4879008 . + . ID=gene-LI478_RS23585;Name=LI478_RS23585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS23585 NZ_CP085478.1 Protein Homology CDS 4877731 4879008 . + 0 ID=cds-WP_004178268.1;Parent=gene-LI478_RS23585;Dbxref=Genbank:WP_004178268.1;Name=WP_004178268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224554.1;locus_tag=LI478_RS23585;product=L-serine ammonia-lyase%2C iron-sulfur-dependent%2C subunit alpha;protein_id=WP_004178268.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4879092 4879832 . + . ID=gene-LI478_RS23590;Name=LI478_RS23590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS23590 NZ_CP085478.1 Protein Homology CDS 4879092 4879832 . + 0 ID=cds-WP_227394158.1;Parent=gene-LI478_RS23590;Dbxref=Genbank:WP_227394158.1;Name=WP_227394158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224553.1;locus_tag=LI478_RS23590;product=AzlC family ABC transporter permease;protein_id=WP_227394158.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4879825 4880145 . + . ID=gene-LI478_RS23595;Name=LI478_RS23595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS23595 NZ_CP085478.1 Protein Homology CDS 4879825 4880145 . + 0 ID=cds-WP_004177855.1;Parent=gene-LI478_RS23595;Dbxref=Genbank:WP_004177855.1;Name=WP_004177855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004873013.1;locus_tag=LI478_RS23595;product=AzlD domain-containing protein;protein_id=WP_004177855.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4880166 4880546 . + . ID=gene-LI478_RS23600;Name=LI478_RS23600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS23600 NZ_CP085478.1 Protein Homology CDS 4880166 4880546 . + 0 ID=cds-WP_004178266.1;Parent=gene-LI478_RS23600;Dbxref=Genbank:WP_004178266.1;Name=WP_004178266.1;Ontology_term=GO:0008152,GO:0019239;gbkey=CDS;go_function=deaminase activity|0019239||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224550.1;locus_tag=LI478_RS23600;product=Rid family detoxifying hydrolase;protein_id=WP_004178266.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4880654 4881163 . + . ID=gene-LI478_RS23605;Name=LI478_RS23605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS23605 NZ_CP085478.1 Protein Homology CDS 4880654 4881163 . + 0 ID=cds-WP_048332275.1;Parent=gene-LI478_RS23605;Dbxref=Genbank:WP_048332275.1;Name=WP_048332275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224549.1;locus_tag=LI478_RS23605;product=GNAT family N-acetyltransferase;protein_id=WP_048332275.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4881172 4881627 . + . ID=gene-LI478_RS23610;Name=LI478_RS23610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS23610 NZ_CP085478.1 Protein Homology CDS 4881172 4881627 . + 0 ID=cds-WP_004177857.1;Parent=gene-LI478_RS23610;Dbxref=Genbank:WP_004177857.1;Name=WP_004177857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224548.1;locus_tag=LI478_RS23610;product=acyltransferase;protein_id=WP_004177857.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4881677 4883326 . - . ID=gene-LI478_RS23615;Name=pgi;gbkey=Gene;gene=pgi;gene_biotype=protein_coding;locus_tag=LI478_RS23615 NZ_CP085478.1 Protein Homology CDS 4881677 4883326 . - 0 ID=cds-WP_002884631.1;Parent=gene-LI478_RS23615;Dbxref=Genbank:WP_002884631.1;Name=WP_002884631.1;Ontology_term=GO:0006094,GO:0006096,GO:0004347;gbkey=CDS;gene=pgi;go_function=glucose-6-phosphate isomerase activity|0004347||IEA;go_process=gluconeogenesis|0006094||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224547.1;locus_tag=LI478_RS23615;product=glucose-6-phosphate isomerase;protein_id=WP_002884631.1;transl_table=11 NZ_CP085478.1 cmsearch riboswitch 4883676 4883911 . + . ID=id-NZ_CP085478.1:4883676..4883911;Dbxref=RFAM:RF00168;Note=Lysine riboswitch is most abundant in Firmicutes and Gammaproteobacteria where they are found upstream of a number of genes involved in lysine biosynthesis%2C transport and catabolism;bound_moiety=lysine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_CP085478.1 RefSeq gene 4884091 4885440 . + . ID=gene-LI478_RS23620;Name=lysC;gbkey=Gene;gene=lysC;gene_biotype=protein_coding;locus_tag=LI478_RS23620 NZ_CP085478.1 Protein Homology CDS 4884091 4885440 . + 0 ID=cds-WP_004146591.1;Parent=gene-LI478_RS23620;Dbxref=Genbank:WP_004146591.1;Name=WP_004146591.1;Ontology_term=GO:0009089,GO:0004072;gbkey=CDS;gene=lysC;go_function=aspartate kinase activity|0004072||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224546.1;locus_tag=LI478_RS23620;product=lysine-sensitive aspartokinase 3;protein_id=WP_004146591.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4885579 4886508 . + . ID=gene-LI478_RS23625;Name=panS;gbkey=Gene;gene=panS;gene_biotype=protein_coding;locus_tag=LI478_RS23625 NZ_CP085478.1 Protein Homology CDS 4885579 4886508 . + 0 ID=cds-WP_002884627.1;Parent=gene-LI478_RS23625;Dbxref=Genbank:WP_002884627.1;Name=WP_002884627.1;gbkey=CDS;gene=panS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224545.1;locus_tag=LI478_RS23625;product=ketopantoate/pantoate/pantothenate transporter PanS;protein_id=WP_002884627.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4886625 4886897 . + . ID=gene-LI478_RS23630;Name=LI478_RS23630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS23630 NZ_CP085478.1 Protein Homology CDS 4886625 4886897 . + 0 ID=cds-WP_002884625.1;Parent=gene-LI478_RS23630;Dbxref=Genbank:WP_002884625.1;Name=WP_002884625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224544.1;locus_tag=LI478_RS23630;product=DUF3811 domain-containing protein;protein_id=WP_002884625.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4886894 4887769 . - . ID=gene-LI478_RS23635;Name=rluF;gbkey=Gene;gene=rluF;gene_biotype=protein_coding;locus_tag=LI478_RS23635 NZ_CP085478.1 Protein Homology CDS 4886894 4887769 . - 0 ID=cds-WP_002884619.1;Parent=gene-LI478_RS23635;Dbxref=Genbank:WP_002884619.1;Name=WP_002884619.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluF;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224543.1;locus_tag=LI478_RS23635;product=23S rRNA pseudouridine(2604) synthase RluF;protein_id=WP_002884619.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4888119 4889066 . + . ID=gene-LI478_RS23640;Name=LI478_RS23640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS23640 NZ_CP085478.1 Protein Homology CDS 4888119 4889066 . + 0 ID=cds-WP_002884616.1;Parent=gene-LI478_RS23640;Dbxref=Genbank:WP_002884616.1;Name=WP_002884616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313031.3;locus_tag=LI478_RS23640;product=sugar-binding transcriptional regulator;protein_id=WP_002884616.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4889137 4889940 . + . ID=gene-LI478_RS23645;Name=LI478_RS23645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS23645 NZ_CP085478.1 Protein Homology CDS 4889137 4889940 . + 0 ID=cds-WP_002884614.1;Parent=gene-LI478_RS23645;Dbxref=Genbank:WP_002884614.1;Name=WP_002884614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224541.1;locus_tag=LI478_RS23645;product=SDR family oxidoreductase;protein_id=WP_002884614.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4889950 4890357 . + . ID=gene-LI478_RS23650;Name=LI478_RS23650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS23650 NZ_CP085478.1 Protein Homology CDS 4889950 4890357 . + 0 ID=cds-WP_009309461.1;Parent=gene-LI478_RS23650;Dbxref=Genbank:WP_009309461.1;Name=WP_009309461.1;Ontology_term=GO:0008643,GO:0016773;gbkey=CDS;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224540.1;locus_tag=LI478_RS23650;product=mannose/fructose/sorbose PTS transporter subunit IIA;protein_id=WP_009309461.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4890357 4890851 . + . ID=gene-LI478_RS23655;Name=LI478_RS23655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS23655 NZ_CP085478.1 Protein Homology CDS 4890357 4890851 . + 0 ID=cds-WP_004151751.1;Parent=gene-LI478_RS23655;Dbxref=Genbank:WP_004151751.1;Name=WP_004151751.1;Ontology_term=GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224539.1;locus_tag=LI478_RS23655;product=mannose/fructose/sorbose PTS transporter subunit IIB;protein_id=WP_004151751.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4890917 4891717 . + . ID=gene-LI478_RS23660;Name=LI478_RS23660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS23660 NZ_CP085478.1 Protein Homology CDS 4890917 4891717 . + 0 ID=cds-WP_002884608.1;Parent=gene-LI478_RS23660;Dbxref=Genbank:WP_002884608.1;Name=WP_002884608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224538.1;locus_tag=LI478_RS23660;product=PTS mannose/fructose/sorbose transporter subunit IIC;protein_id=WP_002884608.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4891729 4892553 . + . ID=gene-LI478_RS23665;Name=LI478_RS23665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS23665 NZ_CP085478.1 Protein Homology CDS 4891729 4892553 . + 0 ID=cds-WP_032104777.1;Parent=gene-LI478_RS23665;Dbxref=Genbank:WP_032104777.1;Name=WP_032104777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224537.1;locus_tag=LI478_RS23665;product=PTS system mannose/fructose/sorbose family transporter subunit IID;protein_id=WP_032104777.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4892626 4893858 . + . ID=gene-LI478_RS23670;Name=sorE;gbkey=Gene;gene=sorE;gene_biotype=protein_coding;locus_tag=LI478_RS23670 NZ_CP085478.1 Protein Homology CDS 4892626 4893858 . + 0 ID=cds-WP_002884587.1;Parent=gene-LI478_RS23670;Dbxref=Genbank:WP_002884587.1;Name=WP_002884587.1;gbkey=CDS;gene=sorE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224536.1;locus_tag=LI478_RS23670;product=L-sorbose 1-phosphate reductase;protein_id=WP_002884587.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4893851 4894660 . + . ID=gene-LI478_RS23675;Name=LI478_RS23675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS23675 NZ_CP085478.1 Protein Homology CDS 4893851 4894660 . + 0 ID=cds-WP_020803742.1;Parent=gene-LI478_RS23675;Dbxref=Genbank:WP_020803742.1;Name=WP_020803742.1;Ontology_term=GO:0004764;gbkey=CDS;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224535.1;locus_tag=LI478_RS23675;product=shikimate 5-dehydrogenase;protein_id=WP_020803742.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4894750 4896381 . - . ID=gene-LI478_RS23680;Name=LI478_RS23680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS23680 NZ_CP085478.1 Protein Homology CDS 4894750 4896381 . - 0 ID=cds-WP_004177864.1;Parent=gene-LI478_RS23680;Dbxref=Genbank:WP_004177864.1;Name=WP_004177864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224534.1;locus_tag=LI478_RS23680;product=Na/Pi cotransporter family protein;protein_id=WP_004177864.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4896511 4900194 . - . ID=gene-LI478_RS23685;Name=metH;gbkey=Gene;gene=metH;gene_biotype=protein_coding;locus_tag=LI478_RS23685 NZ_CP085478.1 Protein Homology CDS 4896511 4900194 . - 0 ID=cds-WP_032439099.1;Parent=gene-LI478_RS23685;Dbxref=Genbank:WP_032439099.1;Name=WP_032439099.1;Ontology_term=GO:0009086,GO:0008270,GO:0008705;gbkey=CDS;gene=metH;go_function=zinc ion binding|0008270||IEA,methionine synthase activity|0008705||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224533.1;locus_tag=LI478_RS23685;product=methionine synthase;protein_id=WP_032439099.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4900389 4901219 . + . ID=gene-LI478_RS23690;Name=iclR;gbkey=Gene;gene=iclR;gene_biotype=protein_coding;locus_tag=LI478_RS23690 NZ_CP085478.1 Protein Homology CDS 4900389 4901219 . + 0 ID=cds-WP_002884578.1;Parent=gene-LI478_RS23690;Dbxref=Genbank:WP_002884578.1;Name=WP_002884578.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=iclR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000258962.1;locus_tag=LI478_RS23690;product=glyoxylate bypass operon transcriptional repressor IclR;protein_id=WP_002884578.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4901270 4903054 . - . ID=gene-LI478_RS23695;Name=aceK;gbkey=Gene;gene=aceK;gene_biotype=protein_coding;locus_tag=LI478_RS23695 NZ_CP085478.1 Protein Homology CDS 4901270 4903054 . - 0 ID=cds-WP_227394159.1;Parent=gene-LI478_RS23695;Dbxref=Genbank:WP_227394159.1;Name=WP_227394159.1;Ontology_term=GO:0006006,GO:0008772,GO:0016791;gbkey=CDS;gene=aceK;go_function=[isocitrate dehydrogenase (NADP+)] kinase activity|0008772||IEA,phosphatase activity|0016791||IEA;go_process=glucose metabolic process|0006006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224531.1;locus_tag=LI478_RS23695;product=bifunctional isocitrate dehydrogenase kinase/phosphatase;protein_id=WP_227394159.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4903157 4904461 . - . ID=gene-LI478_RS23700;Name=aceA;gbkey=Gene;gene=aceA;gene_biotype=protein_coding;locus_tag=LI478_RS23700 NZ_CP085478.1 Protein Homology CDS 4903157 4904461 . - 0 ID=cds-WP_002884570.1;Parent=gene-LI478_RS23700;Dbxref=Genbank:WP_002884570.1;Name=WP_002884570.1;Ontology_term=GO:0019752,GO:0004451;gbkey=CDS;gene=aceA;go_function=isocitrate lyase activity|0004451||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463049.1;locus_tag=LI478_RS23700;product=isocitrate lyase;protein_id=WP_002884570.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4904541 4906142 . - . ID=gene-LI478_RS23705;Name=aceB;gbkey=Gene;gene=aceB;gene_biotype=protein_coding;locus_tag=LI478_RS23705 NZ_CP085478.1 Protein Homology CDS 4904541 4906142 . - 0 ID=cds-WP_002884559.1;Parent=gene-LI478_RS23705;Dbxref=Genbank:WP_002884559.1;Name=WP_002884559.1;Ontology_term=GO:0006099,GO:0004474;gbkey=CDS;gene=aceB;go_function=malate synthase activity|0004474||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224529.1;locus_tag=LI478_RS23705;product=malate synthase A;protein_id=WP_002884559.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4906403 4907332 . - . ID=gene-LI478_RS23710;Name=metA;gbkey=Gene;gene=metA;gene_biotype=protein_coding;locus_tag=LI478_RS23710 NZ_CP085478.1 Protein Homology CDS 4906403 4907332 . - 0 ID=cds-WP_004146576.1;Parent=gene-LI478_RS23710;Dbxref=Genbank:WP_004146576.1;Name=WP_004146576.1;Ontology_term=GO:0009086,GO:0008899;gbkey=CDS;gene=metA;go_function=homoserine O-succinyltransferase activity|0008899||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132837.1;locus_tag=LI478_RS23710;product=homoserine O-succinyltransferase;protein_id=WP_004146576.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4907489 4907950 . + . ID=gene-LI478_RS23715;Name=LI478_RS23715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS23715 NZ_CP085478.1 Protein Homology CDS 4907489 4907950 . + 0 ID=cds-WP_004178258.1;Parent=gene-LI478_RS23715;Dbxref=Genbank:WP_004178258.1;Name=WP_004178258.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224527.1;locus_tag=LI478_RS23715;product=acetyltransferase;protein_id=WP_004178258.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4908281 4908396 . - . ID=gene-LI478_RS23720;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=LI478_RS23720 NZ_CP085478.1 cmsearch rRNA 4908281 4908396 . - . ID=rna-LI478_RS23720;Parent=gene-LI478_RS23720;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LI478_RS23720;product=5S ribosomal RNA NZ_CP085478.1 cmsearch exon 4908281 4908396 . - . ID=exon-LI478_RS23720-1;Parent=rna-LI478_RS23720;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LI478_RS23720;product=5S ribosomal RNA NZ_CP085478.1 RefSeq gene 4908494 4911395 . - . ID=gene-LI478_RS23725;Name=LI478_RS23725;gbkey=Gene;gene_biotype=rRNA;locus_tag=LI478_RS23725 NZ_CP085478.1 cmsearch rRNA 4908494 4911395 . - . ID=rna-LI478_RS23725;Parent=gene-LI478_RS23725;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LI478_RS23725;product=23S ribosomal RNA NZ_CP085478.1 cmsearch exon 4908494 4911395 . - . ID=exon-LI478_RS23725-1;Parent=rna-LI478_RS23725;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LI478_RS23725;product=23S ribosomal RNA NZ_CP085478.1 RefSeq gene 4911578 4911653 . - . ID=gene-LI478_RS23730;Name=LI478_RS23730;gbkey=Gene;gene_biotype=tRNA;locus_tag=LI478_RS23730 NZ_CP085478.1 tRNAscan-SE tRNA 4911578 4911653 . - . ID=rna-LI478_RS23730;Parent=gene-LI478_RS23730;anticodon=(pos:complement(4911617..4911619));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS23730;product=tRNA-Glu NZ_CP085478.1 tRNAscan-SE exon 4911578 4911653 . - . ID=exon-LI478_RS23730-1;Parent=rna-LI478_RS23730;anticodon=(pos:complement(4911617..4911619));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS23730;product=tRNA-Glu NZ_CP085478.1 RefSeq gene 4911739 4913278 . - . ID=gene-LI478_RS23735;Name=LI478_RS23735;gbkey=Gene;gene_biotype=rRNA;locus_tag=LI478_RS23735 NZ_CP085478.1 cmsearch rRNA 4911739 4913278 . - . ID=rna-LI478_RS23735;Parent=gene-LI478_RS23735;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LI478_RS23735;product=16S ribosomal RNA NZ_CP085478.1 cmsearch exon 4911739 4913278 . - . ID=exon-LI478_RS23735-1;Parent=rna-LI478_RS23735;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LI478_RS23735;product=16S ribosomal RNA NZ_CP085478.1 RefSeq gene 4913906 4915495 . + . ID=gene-LI478_RS23740;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=LI478_RS23740 NZ_CP085478.1 Protein Homology CDS 4913906 4915495 . + 0 ID=cds-WP_004178254.1;Parent=gene-LI478_RS23740;Dbxref=Genbank:WP_004178254.1;Name=WP_004178254.1;Ontology_term=GO:0009152,GO:0003937,GO:0004643;gbkey=CDS;gene=purH;go_function=IMP cyclohydrolase activity|0003937||IEA,phosphoribosylaminoimidazolecarboxamide formyltransferase activity|0004643||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132841.1;locus_tag=LI478_RS23740;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;protein_id=WP_004178254.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4915511 4916806 . + . ID=gene-LI478_RS23745;Name=purD;gbkey=Gene;gene=purD;gene_biotype=protein_coding;locus_tag=LI478_RS23745 NZ_CP085478.1 Protein Homology CDS 4915511 4916806 . + 0 ID=cds-WP_002884357.1;Parent=gene-LI478_RS23745;Dbxref=Genbank:WP_002884357.1;Name=WP_002884357.1;Ontology_term=GO:0006189,GO:0009152,GO:0004637;gbkey=CDS;gene=purD;go_function=phosphoribosylamine-glycine ligase activity|0004637||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224525.1;locus_tag=LI478_RS23745;product=phosphoribosylamine--glycine ligase;protein_id=WP_002884357.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4916796 4918127 . - . ID=gene-LI478_RS23750;Name=zraR;gbkey=Gene;gene=zraR;gene_biotype=protein_coding;locus_tag=LI478_RS23750 NZ_CP085478.1 Protein Homology CDS 4916796 4918127 . - 0 ID=cds-WP_004212861.1;Parent=gene-LI478_RS23750;Dbxref=Genbank:WP_004212861.1;Name=WP_004212861.1;Ontology_term=GO:0000160,GO:0006355,GO:0043565;gbkey=CDS;gene=zraR;go_function=sequence-specific DNA binding|0043565||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224524.1;locus_tag=LI478_RS23750;product=sigma-54-dependent response regulator transcription factor ZraR;protein_id=WP_004212861.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4918114 4919508 . - . ID=gene-LI478_RS23755;Name=zraS;gbkey=Gene;gene=zraS;gene_biotype=protein_coding;locus_tag=LI478_RS23755 NZ_CP085478.1 Protein Homology CDS 4918114 4919508 . - 0 ID=cds-WP_048269938.1;Parent=gene-LI478_RS23755;Dbxref=Genbank:WP_048269938.1;Name=WP_048269938.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155;gbkey=CDS;gene=zraS;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224523.1;locus_tag=LI478_RS23755;product=two-component system sensor histidine kinase ZraS;protein_id=WP_048269938.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4919768 4920205 . + . ID=gene-LI478_RS23760;Name=zraP;gbkey=Gene;gene=zraP;gene_biotype=protein_coding;locus_tag=LI478_RS23760 NZ_CP085478.1 Protein Homology CDS 4919768 4920205 . + 0 ID=cds-WP_002884346.1;Parent=gene-LI478_RS23760;Dbxref=Genbank:WP_002884346.1;Name=WP_002884346.1;gbkey=CDS;gene=zraP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224521.1;locus_tag=LI478_RS23760;product=zinc resistance sensor/chaperone ZraP;protein_id=WP_002884346.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4920209 4920904 . - . ID=gene-LI478_RS23765;Name=LI478_RS23765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS23765 NZ_CP085478.1 Protein Homology CDS 4920209 4920904 . - 0 ID=cds-WP_016530968.1;Parent=gene-LI478_RS23765;Dbxref=Genbank:WP_016530968.1;Name=WP_016530968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224520.1;locus_tag=LI478_RS23765;product=DUF1481 domain-containing protein;protein_id=WP_016530968.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4920917 4921189 . - . ID=gene-LI478_RS23770;Name=hupA;gbkey=Gene;gene=hupA;gene_biotype=protein_coding;locus_tag=LI478_RS23770 NZ_CP085478.1 Protein Homology CDS 4920917 4921189 . - 0 ID=cds-WP_002884342.1;Parent=gene-LI478_RS23770;Dbxref=Genbank:WP_002884342.1;Name=WP_002884342.1;gbkey=CDS;gene=hupA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017460010.1;locus_tag=LI478_RS23770;product=DNA-binding protein HU-alpha;protein_id=WP_002884342.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4921376 4921966 . - . ID=gene-LI478_RS23775;Name=LI478_RS23775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS23775 NZ_CP085478.1 Protein Homology CDS 4921376 4921966 . - 0 ID=cds-WP_002884331.1;Parent=gene-LI478_RS23775;Dbxref=Genbank:WP_002884331.1;Name=WP_002884331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224518.1;locus_tag=LI478_RS23775;product=YjaG family protein;protein_id=WP_002884331.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4922009 4922680 . - . ID=gene-LI478_RS23780;Name=nfi;gbkey=Gene;gene=nfi;gene_biotype=protein_coding;locus_tag=LI478_RS23780 NZ_CP085478.1 Protein Homology CDS 4922009 4922680 . - 0 ID=cds-WP_004152311.1;Parent=gene-LI478_RS23780;Dbxref=Genbank:WP_004152311.1;Name=WP_004152311.1;Note=cleaves DNA at apurinic or apyrimidinic sites;Ontology_term=GO:0006281,GO:0004519;gbkey=CDS;gene=nfi;go_function=endonuclease activity|0004519||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224517.1;locus_tag=LI478_RS23780;product=deoxyribonuclease V;protein_id=WP_004152311.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4922693 4923757 . - . ID=gene-LI478_RS23785;Name=hemE;gbkey=Gene;gene=hemE;gene_biotype=protein_coding;locus_tag=LI478_RS23785 NZ_CP085478.1 Protein Homology CDS 4922693 4923757 . - 0 ID=cds-WP_002884329.1;Parent=gene-LI478_RS23785;Dbxref=Genbank:WP_002884329.1;Name=WP_002884329.1;Ontology_term=GO:0006779,GO:0004853;gbkey=CDS;gene=hemE;go_function=uroporphyrinogen decarboxylase activity|0004853||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224516.1;locus_tag=LI478_RS23785;product=uroporphyrinogen decarboxylase;protein_id=WP_002884329.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4923798 4924571 . - . ID=gene-LI478_RS23790;Name=nudC;gbkey=Gene;gene=nudC;gene_biotype=protein_coding;locus_tag=LI478_RS23790 NZ_CP085478.1 Protein Homology CDS 4923798 4924571 . - 0 ID=cds-WP_002884327.1;Parent=gene-LI478_RS23790;Dbxref=Genbank:WP_002884327.1;Name=WP_002884327.1;Ontology_term=GO:0000210,GO:0016787;gbkey=CDS;gene=nudC;go_function=NAD+ diphosphatase activity|0000210||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224515.1;locus_tag=LI478_RS23790;product=NAD(+) diphosphatase;protein_id=WP_002884327.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4924665 4925162 . + . ID=gene-LI478_RS23795;Name=LI478_RS23795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS23795 NZ_CP085478.1 Protein Homology CDS 4924665 4925162 . + 0 ID=cds-WP_002884324.1;Parent=gene-LI478_RS23795;Dbxref=Genbank:WP_002884324.1;Name=WP_002884324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224514.1;locus_tag=LI478_RS23795;product=Rsd/AlgQ family anti-sigma factor;protein_id=WP_002884324.1;transl_table=11 NZ_CP085478.1 cmsearch riboswitch 4925215 4925339 . + . ID=id-NZ_CP085478.1:4925215..4925339;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_CP085478.1 RefSeq gene 4925425 4927320 . + . ID=gene-LI478_RS23800;Name=thiC;gbkey=Gene;gene=thiC;gene_biotype=protein_coding;locus_tag=LI478_RS23800 NZ_CP085478.1 Protein Homology CDS 4925425 4927320 . + 0 ID=cds-WP_009485012.1;Parent=gene-LI478_RS23800;Dbxref=Genbank:WP_009485012.1;Name=WP_009485012.1;Ontology_term=GO:0009228,GO:0051536;gbkey=CDS;gene=thiC;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224513.1;locus_tag=LI478_RS23800;product=phosphomethylpyrimidine synthase ThiC;protein_id=WP_009485012.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4927320 4927955 . + . ID=gene-LI478_RS23805;Name=thiE;gbkey=Gene;gene=thiE;gene_biotype=protein_coding;locus_tag=LI478_RS23805 NZ_CP085478.1 Protein Homology CDS 4927320 4927955 . + 0 ID=cds-WP_004152310.1;Parent=gene-LI478_RS23805;Dbxref=Genbank:WP_004152310.1;Name=WP_004152310.1;Ontology_term=GO:0009228,GO:0004789;gbkey=CDS;gene=thiE;go_function=thiamine-phosphate diphosphorylase activity|0004789||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224512.1;locus_tag=LI478_RS23805;product=thiamine phosphate synthase;protein_id=WP_004152310.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4927948 4928703 . + . ID=gene-LI478_RS23810;Name=thiF;gbkey=Gene;gene=thiF;gene_biotype=protein_coding;locus_tag=LI478_RS23810 NZ_CP085478.1 Protein Homology CDS 4927948 4928703 . + 0 ID=cds-WP_004177871.1;Parent=gene-LI478_RS23810;Dbxref=Genbank:WP_004177871.1;Name=WP_004177871.1;Ontology_term=GO:0009228,GO:0016779;gbkey=CDS;gene=thiF;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224511.1;locus_tag=LI478_RS23810;product=thiazole biosynthesis adenylyltransferase ThiF;protein_id=WP_004177871.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4928687 4928887 . + . ID=gene-LI478_RS23815;Name=thiS;gbkey=Gene;gene=thiS;gene_biotype=protein_coding;locus_tag=LI478_RS23815 NZ_CP085478.1 Protein Homology CDS 4928687 4928887 . + 0 ID=cds-WP_002884183.1;Parent=gene-LI478_RS23815;Dbxref=Genbank:WP_002884183.1;Name=WP_002884183.1;Ontology_term=GO:0009228,GO:0003824;gbkey=CDS;gene=thiS;go_function=catalytic activity|0003824||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224510.1;locus_tag=LI478_RS23815;product=sulfur carrier protein ThiS;protein_id=WP_002884183.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4928889 4929659 . + . ID=gene-LI478_RS23820;Name=thiG;gbkey=Gene;gene=thiG;gene_biotype=protein_coding;locus_tag=LI478_RS23820 NZ_CP085478.1 Protein Homology CDS 4928889 4929659 . + 0 ID=cds-WP_004146302.1;Parent=gene-LI478_RS23820;Dbxref=Genbank:WP_004146302.1;Name=WP_004146302.1;gbkey=CDS;gene=thiG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224509.1;locus_tag=LI478_RS23820;product=thiazole synthase;protein_id=WP_004146302.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4929656 4930789 . + . ID=gene-LI478_RS23825;Name=thiH;gbkey=Gene;gene=thiH;gene_biotype=protein_coding;locus_tag=LI478_RS23825 NZ_CP085478.1 Protein Homology CDS 4929656 4930789 . + 0 ID=cds-WP_004212852.1;Parent=gene-LI478_RS23825;Dbxref=Genbank:WP_004212852.1;Name=WP_004212852.1;Ontology_term=GO:0009228,GO:0016829,GO:1904047;gbkey=CDS;gene=thiH;go_function=lyase activity|0016829||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224508.1;locus_tag=LI478_RS23825;product=2-iminoacetate synthase ThiH;protein_id=WP_004212852.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4931106 4932638 . + . ID=gene-LI478_RS23830;Name=LI478_RS23830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS23830 NZ_CP085478.1 Protein Homology CDS 4931106 4932638 . + 0 ID=cds-WP_023285699.1;Parent=gene-LI478_RS23830;Dbxref=Genbank:WP_023285699.1;Name=WP_023285699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224506.1;locus_tag=LI478_RS23830;product=sensor domain-containing diguanylate cyclase;protein_id=WP_023285699.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4932856 4933116 . + . ID=gene-LI478_RS23835;Name=LI478_RS23835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS23835 NZ_CP085478.1 Protein Homology CDS 4932856 4933116 . + 0 ID=cds-WP_004198931.1;Parent=gene-LI478_RS23835;Dbxref=Genbank:WP_004198931.1;Name=WP_004198931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224505.1;locus_tag=LI478_RS23835;product=PTS sugar transporter subunit IIB;protein_id=WP_004198931.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4933120 4933437 . + . ID=gene-LI478_RS23840;Name=LI478_RS23840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS23840 NZ_CP085478.1 Protein Homology CDS 4933120 4933437 . + 0 ID=cds-WP_002884149.1;Parent=gene-LI478_RS23840;Dbxref=Genbank:WP_002884149.1;Name=WP_002884149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224504.1;locus_tag=LI478_RS23840;product=PTS lactose/cellobiose transporter subunit IIA;protein_id=WP_002884149.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4933480 4934820 . - . ID=gene-LI478_RS23845;Name=dcuB;gbkey=Gene;gene=dcuB;gene_biotype=protein_coding;locus_tag=LI478_RS23845 NZ_CP085478.1 Protein Homology CDS 4933480 4934820 . - 0 ID=cds-WP_019705857.1;Parent=gene-LI478_RS23845;Dbxref=Genbank:WP_019705857.1;Name=WP_019705857.1;gbkey=CDS;gene=dcuB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224503.1;locus_tag=LI478_RS23845;product=anaerobic C4-dicarboxylate transporter DcuB;protein_id=WP_019705857.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4935221 4939444 . - . ID=gene-LI478_RS23850;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=LI478_RS23850 NZ_CP085478.1 Protein Homology CDS 4935221 4939444 . - 0 ID=cds-WP_002884146.1;Parent=gene-LI478_RS23850;Dbxref=Genbank:WP_002884146.1;Name=WP_002884146.1;Ontology_term=GO:0006351,GO:0003899,GO:0000345;gbkey=CDS;gene=rpoC;go_component=cytosolic DNA-directed RNA polymerase complex|0000345||IEA;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224502.1;locus_tag=LI478_RS23850;product=DNA-directed RNA polymerase subunit beta';protein_id=WP_002884146.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4939521 4943549 . - . ID=gene-LI478_RS23855;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=LI478_RS23855 NZ_CP085478.1 Protein Homology CDS 4939521 4943549 . - 0 ID=cds-WP_004152306.1;Parent=gene-LI478_RS23855;Dbxref=Genbank:WP_004152306.1;Name=WP_004152306.1;Ontology_term=GO:0006351,GO:0003899,GO:0000345;gbkey=CDS;gene=rpoB;go_component=cytosolic DNA-directed RNA polymerase complex|0000345||IEA;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004870488.1;locus_tag=LI478_RS23855;product=DNA-directed RNA polymerase subunit beta;protein_id=WP_004152306.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4943874 4944239 . - . ID=gene-LI478_RS23860;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=LI478_RS23860 NZ_CP085478.1 Protein Homology CDS 4943874 4944239 . - 0 ID=cds-WP_002884142.1;Parent=gene-LI478_RS23860;Dbxref=Genbank:WP_002884142.1;Name=WP_002884142.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplL;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122872.1;locus_tag=LI478_RS23860;product=50S ribosomal protein L7/L12;protein_id=WP_002884142.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4944306 4944803 . - . ID=gene-LI478_RS23865;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=LI478_RS23865 NZ_CP085478.1 Protein Homology CDS 4944306 4944803 . - 0 ID=cds-WP_001207203.1;Parent=gene-LI478_RS23865;Dbxref=Genbank:WP_001207203.1;Name=WP_001207203.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplJ;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438625.1;locus_tag=LI478_RS23865;product=50S ribosomal protein L10;protein_id=WP_001207203.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4945217 4945921 . - . ID=gene-LI478_RS23870;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=LI478_RS23870 NZ_CP085478.1 Protein Homology CDS 4945217 4945921 . - 0 ID=cds-WP_002884036.1;Parent=gene-LI478_RS23870;Dbxref=Genbank:WP_002884036.1;Name=WP_002884036.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplA;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224498.1;locus_tag=LI478_RS23870;product=50S ribosomal protein L1;protein_id=WP_002884036.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4945925 4946353 . - . ID=gene-LI478_RS23875;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=LI478_RS23875 NZ_CP085478.1 Protein Homology CDS 4945925 4946353 . - 0 ID=cds-WP_002884034.1;Parent=gene-LI478_RS23875;Dbxref=Genbank:WP_002884034.1;Name=WP_002884034.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplK;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006121495.1;locus_tag=LI478_RS23875;product=50S ribosomal protein L11;protein_id=WP_002884034.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4946510 4947055 . - . ID=gene-LI478_RS23880;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=LI478_RS23880 NZ_CP085478.1 Protein Homology CDS 4946510 4947055 . - 0 ID=cds-WP_001287521.1;Parent=gene-LI478_RS23880;Dbxref=Genbank:WP_001287521.1;Name=WP_001287521.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusG;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005280494.1;locus_tag=LI478_RS23880;product=transcription termination/antitermination protein NusG;protein_id=WP_001287521.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4947057 4947440 . - . ID=gene-LI478_RS23885;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=LI478_RS23885 NZ_CP085478.1 Protein Homology CDS 4947057 4947440 . - 0 ID=cds-WP_002883772.1;Parent=gene-LI478_RS23885;Dbxref=Genbank:WP_002883772.1;Name=WP_002883772.1;gbkey=CDS;gene=secE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007665874.1;locus_tag=LI478_RS23885;product=preprotein translocase subunit SecE;protein_id=WP_002883772.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4947777 4948961 . - . ID=gene-LI478_RS23890;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=LI478_RS23890 NZ_CP085478.1 Protein Homology CDS 4947777 4948961 . - 0 ID=cds-WP_004174069.1-2;Parent=gene-LI478_RS23890;Dbxref=Genbank:WP_004174069.1;Name=WP_004174069.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224494.1;locus_tag=LI478_RS23890;product=elongation factor Tu;protein_id=WP_004174069.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4949077 4949152 . - . ID=gene-LI478_RS23895;Name=LI478_RS23895;gbkey=Gene;gene_biotype=tRNA;locus_tag=LI478_RS23895 NZ_CP085478.1 tRNAscan-SE tRNA 4949077 4949152 . - . ID=rna-LI478_RS23895;Parent=gene-LI478_RS23895;anticodon=(pos:complement(4949117..4949119));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS23895;product=tRNA-Thr NZ_CP085478.1 tRNAscan-SE exon 4949077 4949152 . - . ID=exon-LI478_RS23895-1;Parent=rna-LI478_RS23895;anticodon=(pos:complement(4949117..4949119));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS23895;product=tRNA-Thr NZ_CP085478.1 RefSeq gene 4949158 4949232 . - . ID=gene-LI478_RS23900;Name=LI478_RS23900;gbkey=Gene;gene_biotype=tRNA;locus_tag=LI478_RS23900 NZ_CP085478.1 tRNAscan-SE tRNA 4949158 4949232 . - . ID=rna-LI478_RS23900;Parent=gene-LI478_RS23900;anticodon=(pos:complement(4949197..4949199));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS23900;product=tRNA-Gly NZ_CP085478.1 tRNAscan-SE exon 4949158 4949232 . - . ID=exon-LI478_RS23900-1;Parent=rna-LI478_RS23900;anticodon=(pos:complement(4949197..4949199));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS23900;product=tRNA-Gly NZ_CP085478.1 RefSeq gene 4949348 4949432 . - . ID=gene-LI478_RS23905;Name=LI478_RS23905;gbkey=Gene;gene_biotype=tRNA;locus_tag=LI478_RS23905 NZ_CP085478.1 tRNAscan-SE tRNA 4949348 4949432 . - . ID=rna-LI478_RS23905;Parent=gene-LI478_RS23905;anticodon=(pos:complement(4949396..4949398));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS23905;product=tRNA-Tyr NZ_CP085478.1 tRNAscan-SE exon 4949348 4949432 . - . ID=exon-LI478_RS23905-1;Parent=rna-LI478_RS23905;anticodon=(pos:complement(4949396..4949398));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS23905;product=tRNA-Tyr NZ_CP085478.1 RefSeq gene 4949443 4949518 . - . ID=gene-LI478_RS23910;Name=LI478_RS23910;gbkey=Gene;gene_biotype=tRNA;locus_tag=LI478_RS23910 NZ_CP085478.1 tRNAscan-SE tRNA 4949443 4949518 . - . ID=rna-LI478_RS23910;Parent=gene-LI478_RS23910;anticodon=(pos:complement(4949483..4949485));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS23910;product=tRNA-Thr NZ_CP085478.1 tRNAscan-SE exon 4949443 4949518 . - . ID=exon-LI478_RS23910-1;Parent=rna-LI478_RS23910;anticodon=(pos:complement(4949483..4949485));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS23910;product=tRNA-Thr NZ_CP085478.1 RefSeq gene 4949947 4950897 . + . ID=gene-LI478_RS23915;Name=coaA;gbkey=Gene;gene=coaA;gene_biotype=protein_coding;locus_tag=LI478_RS23915 NZ_CP085478.1 Protein Homology CDS 4949947 4950897 . + 0 ID=cds-WP_002883524.1;Parent=gene-LI478_RS23915;Dbxref=Genbank:WP_002883524.1;Name=WP_002883524.1;Ontology_term=GO:0015937,GO:0004594;gbkey=CDS;gene=coaA;go_function=pantothenate kinase activity|0004594||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463013.1;locus_tag=LI478_RS23915;product=type I pantothenate kinase;protein_id=WP_002883524.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4950923 4951885 . - . ID=gene-LI478_RS23920;Name=birA;gbkey=Gene;gene=birA;gene_biotype=protein_coding;locus_tag=LI478_RS23920 NZ_CP085478.1 Protein Homology CDS 4950923 4951885 . - 0 ID=cds-WP_002883521.1;Parent=gene-LI478_RS23920;Dbxref=Genbank:WP_002883521.1;Name=WP_002883521.1;Ontology_term=GO:0036211,GO:0004077;gbkey=CDS;gene=birA;go_function=biotin-[acetyl-CoA-carboxylase] ligase activity|0004077||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224492.1;locus_tag=LI478_RS23920;product=bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA;protein_id=WP_002883521.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4951882 4952910 . - . ID=gene-LI478_RS23925;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=LI478_RS23925 NZ_CP085478.1 Protein Homology CDS 4951882 4952910 . - 0 ID=cds-WP_004177874.1;Parent=gene-LI478_RS23925;Dbxref=Genbank:WP_004177874.1;Name=WP_004177874.1;Ontology_term=GO:0008762,GO:0071949;gbkey=CDS;gene=murB;go_function=UDP-N-acetylmuramate dehydrogenase activity|0008762||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224491.1;locus_tag=LI478_RS23925;product=UDP-N-acetylmuramate dehydrogenase;protein_id=WP_004177874.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4953328 4953443 . - . ID=gene-LI478_RS23930;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=LI478_RS23930 NZ_CP085478.1 cmsearch rRNA 4953328 4953443 . - . ID=rna-LI478_RS23930;Parent=gene-LI478_RS23930;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LI478_RS23930;product=5S ribosomal RNA NZ_CP085478.1 cmsearch exon 4953328 4953443 . - . ID=exon-LI478_RS23930-1;Parent=rna-LI478_RS23930;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LI478_RS23930;product=5S ribosomal RNA NZ_CP085478.1 RefSeq gene 4953541 4956442 . - . ID=gene-LI478_RS23935;Name=LI478_RS23935;gbkey=Gene;gene_biotype=rRNA;locus_tag=LI478_RS23935 NZ_CP085478.1 cmsearch rRNA 4953541 4956442 . - . ID=rna-LI478_RS23935;Parent=gene-LI478_RS23935;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LI478_RS23935;product=23S ribosomal RNA NZ_CP085478.1 cmsearch exon 4953541 4956442 . - . ID=exon-LI478_RS23935-1;Parent=rna-LI478_RS23935;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LI478_RS23935;product=23S ribosomal RNA NZ_CP085478.1 RefSeq gene 4956612 4956687 . - . ID=gene-LI478_RS23940;Name=LI478_RS23940;gbkey=Gene;gene_biotype=tRNA;locus_tag=LI478_RS23940 NZ_CP085478.1 tRNAscan-SE tRNA 4956612 4956687 . - . ID=rna-LI478_RS23940;Parent=gene-LI478_RS23940;anticodon=(pos:complement(4956652..4956654));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS23940;product=tRNA-Ala NZ_CP085478.1 tRNAscan-SE exon 4956612 4956687 . - . ID=exon-LI478_RS23940-1;Parent=rna-LI478_RS23940;anticodon=(pos:complement(4956652..4956654));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS23940;product=tRNA-Ala NZ_CP085478.1 RefSeq gene 4956724 4956800 . - . ID=gene-LI478_RS23945;Name=LI478_RS23945;gbkey=Gene;gene_biotype=tRNA;locus_tag=LI478_RS23945 NZ_CP085478.1 tRNAscan-SE tRNA 4956724 4956800 . - . ID=rna-LI478_RS23945;Parent=gene-LI478_RS23945;anticodon=(pos:complement(4956764..4956766));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS23945;product=tRNA-Ile NZ_CP085478.1 tRNAscan-SE exon 4956724 4956800 . - . ID=exon-LI478_RS23945-1;Parent=rna-LI478_RS23945;anticodon=(pos:complement(4956764..4956766));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS23945;product=tRNA-Ile NZ_CP085478.1 RefSeq gene 4956870 4958409 . - . ID=gene-LI478_RS23950;Name=LI478_RS23950;gbkey=Gene;gene_biotype=rRNA;locus_tag=LI478_RS23950 NZ_CP085478.1 cmsearch rRNA 4956870 4958409 . - . ID=rna-LI478_RS23950;Parent=gene-LI478_RS23950;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LI478_RS23950;product=16S ribosomal RNA NZ_CP085478.1 cmsearch exon 4956870 4958409 . - . ID=exon-LI478_RS23950-1;Parent=rna-LI478_RS23950;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LI478_RS23950;product=16S ribosomal RNA NZ_CP085478.1 RefSeq gene 4958797 4959330 . - . ID=gene-LI478_RS23955;Name=hemG;gbkey=Gene;gene=hemG;gene_biotype=protein_coding;locus_tag=LI478_RS23955 NZ_CP085478.1 Protein Homology CDS 4958797 4959330 . - 0 ID=cds-WP_002883453.1;Parent=gene-LI478_RS23955;Dbxref=Genbank:WP_002883453.1;Name=WP_002883453.1;gbkey=CDS;gene=hemG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224490.1;locus_tag=LI478_RS23955;product=menaquinone-dependent protoporphyrinogen IX dehydrogenase;protein_id=WP_002883453.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4959342 4960793 . - . ID=gene-LI478_RS23960;Name=trkH;gbkey=Gene;gene=trkH;gene_biotype=protein_coding;locus_tag=LI478_RS23960 NZ_CP085478.1 Protein Homology CDS 4959342 4960793 . - 0 ID=cds-WP_002883450.1;Parent=gene-LI478_RS23960;Dbxref=Genbank:WP_002883450.1;Name=WP_002883450.1;gbkey=CDS;gene=trkH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004146450.1;locus_tag=LI478_RS23960;product=Trk system potassium transporter TrkH;protein_id=WP_002883450.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4960832 4961446 . - . ID=gene-LI478_RS23965;Name=LI478_RS23965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS23965 NZ_CP085478.1 Protein Homology CDS 4960832 4961446 . - 0 ID=cds-WP_002883449.1;Parent=gene-LI478_RS23965;Dbxref=Genbank:WP_002883449.1;Name=WP_002883449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224488.1;locus_tag=LI478_RS23965;product=IMPACT family protein;protein_id=WP_002883449.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4961446 4962777 . - . ID=gene-LI478_RS23970;Name=pepQ;gbkey=Gene;gene=pepQ;gene_biotype=protein_coding;locus_tag=LI478_RS23970 NZ_CP085478.1 Protein Homology CDS 4961446 4962777 . - 0 ID=cds-WP_004152060.1;Parent=gene-LI478_RS23970;Dbxref=Genbank:WP_004152060.1;Name=WP_004152060.1;gbkey=CDS;gene=pepQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020801804.1;locus_tag=LI478_RS23970;product=Xaa-Pro dipeptidase;protein_id=WP_004152060.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4962969 4965158 . + . ID=gene-LI478_RS23975;Name=fadB;gbkey=Gene;gene=fadB;gene_biotype=protein_coding;locus_tag=LI478_RS23975 NZ_CP085478.1 Protein Homology CDS 4962969 4965158 . + 0 ID=cds-WP_004213300.1;Parent=gene-LI478_RS23975;Dbxref=Genbank:WP_004213300.1;Name=WP_004213300.1;Ontology_term=GO:0009062,GO:0003857,GO:0004165,GO:0004300,GO:0008692;gbkey=CDS;gene=fadB;go_function=3-hydroxyacyl-CoA dehydrogenase activity|0003857||IEA,delta(3)-delta(2)-enoyl-CoA isomerase activity|0004165||IEA,enoyl-CoA hydratase activity|0004300||IEA,3-hydroxybutyryl-CoA epimerase activity|0008692||IEA;go_process=fatty acid catabolic process|0009062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224486.1;locus_tag=LI478_RS23975;product=fatty acid oxidation complex subunit alpha FadB;protein_id=WP_004213300.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4965168 4966331 . + . ID=gene-LI478_RS23980;Name=fadA;gbkey=Gene;gene=fadA;gene_biotype=protein_coding;locus_tag=LI478_RS23980 NZ_CP085478.1 Protein Homology CDS 4965168 4966331 . + 0 ID=cds-WP_004150456.1;Parent=gene-LI478_RS23980;Dbxref=Genbank:WP_004150456.1;Name=WP_004150456.1;Ontology_term=GO:0009062,GO:0003988;gbkey=CDS;gene=fadA;go_function=acetyl-CoA C-acyltransferase activity|0003988||IEA;go_process=fatty acid catabolic process|0009062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224485.1;locus_tag=LI478_RS23980;product=acetyl-CoA C-acyltransferase FadA;protein_id=WP_004150456.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4966438 4967139 . - . ID=gene-LI478_RS23985;Name=fre;gbkey=Gene;gene=fre;gene_biotype=protein_coding;locus_tag=LI478_RS23985 NZ_CP085478.1 Protein Homology CDS 4966438 4967139 . - 0 ID=cds-WP_002883448.1;Parent=gene-LI478_RS23985;Dbxref=Genbank:WP_002883448.1;Name=WP_002883448.1;Ontology_term=GO:0016491;gbkey=CDS;gene=fre;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224484.1;locus_tag=LI478_RS23985;product=NAD(P)H-flavin reductase;protein_id=WP_002883448.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4967189 4968664 . - . ID=gene-LI478_RS23990;Name=ubiD;gbkey=Gene;gene=ubiD;gene_biotype=protein_coding;locus_tag=LI478_RS23990 NZ_CP085478.1 Protein Homology CDS 4967189 4968664 . - 0 ID=cds-WP_064153659.1;Parent=gene-LI478_RS23990;Dbxref=Genbank:WP_064153659.1;Name=WP_064153659.1;Ontology_term=GO:0016831;gbkey=CDS;gene=ubiD;go_function=carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224483.1;locus_tag=LI478_RS23990;product=4-hydroxy-3-polyprenylbenzoate decarboxylase;protein_id=WP_064153659.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4968843 4969331 . + . ID=gene-LI478_RS23995;Name=rfaH;gbkey=Gene;gene=rfaH;gene_biotype=protein_coding;locus_tag=LI478_RS23995 NZ_CP085478.1 Protein Homology CDS 4968843 4969331 . + 0 ID=cds-WP_002883430.1;Parent=gene-LI478_RS23995;Dbxref=Genbank:WP_002883430.1;Name=WP_002883430.1;Ontology_term=GO:0006355;gbkey=CDS;gene=rfaH;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224481.1;locus_tag=LI478_RS23995;product=transcription/translation regulatory transformer protein RfaH;protein_id=WP_002883430.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4969328 4970131 . - . ID=gene-LI478_RS24000;Name=tatD;gbkey=Gene;gene=tatD;gene_biotype=protein_coding;locus_tag=LI478_RS24000 NZ_CP085478.1 Protein Homology CDS 4969328 4970131 . - 0 ID=cds-WP_004146458.1;Parent=gene-LI478_RS24000;Dbxref=Genbank:WP_004146458.1;Name=WP_004146458.1;Ontology_term=GO:0008408;gbkey=CDS;gene=tatD;go_function=3'-5' exonuclease activity|0008408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224480.1;locus_tag=LI478_RS24000;product=3'-5' ssDNA/RNA exonuclease TatD;protein_id=WP_004146458.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4970164 4970943 . - . ID=gene-LI478_RS24005;Name=tatC;gbkey=Gene;gene=tatC;gene_biotype=protein_coding;locus_tag=LI478_RS24005 NZ_CP085478.1 Protein Homology CDS 4970164 4970943 . - 0 ID=cds-WP_002883427.1;Parent=gene-LI478_RS24005;Dbxref=Genbank:WP_002883427.1;Name=WP_002883427.1;gbkey=CDS;gene=tatC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224479.1;locus_tag=LI478_RS24005;product=Sec-independent protein translocase subunit TatC;protein_id=WP_002883427.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4970946 4971482 . - . ID=gene-LI478_RS24010;Name=tatB;gbkey=Gene;gene=tatB;gene_biotype=protein_coding;locus_tag=LI478_RS24010 NZ_CP085478.1 Protein Homology CDS 4970946 4971482 . - 0 ID=cds-WP_002883426.1;Parent=gene-LI478_RS24010;Dbxref=Genbank:WP_002883426.1;Name=WP_002883426.1;Ontology_term=GO:0015031,GO:0015628;gbkey=CDS;gene=tatB;go_process=protein transport|0015031||IEA,protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224478.1;locus_tag=LI478_RS24010;product=Sec-independent protein translocase protein TatB;protein_id=WP_002883426.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4971486 4971737 . - . ID=gene-LI478_RS24015;Name=tatA;gbkey=Gene;gene=tatA;gene_biotype=protein_coding;locus_tag=LI478_RS24015 NZ_CP085478.1 Protein Homology CDS 4971486 4971737 . - 0 ID=cds-WP_002883425.1;Parent=gene-LI478_RS24015;Dbxref=Genbank:WP_002883425.1;Name=WP_002883425.1;gbkey=CDS;gene=tatA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224477.1;locus_tag=LI478_RS24015;product=Sec-independent protein translocase subunit TatA;protein_id=WP_002883425.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4971867 4973507 . - . ID=gene-LI478_RS24020;Name=ubiB;gbkey=Gene;gene=ubiB;gene_biotype=protein_coding;locus_tag=LI478_RS24020 NZ_CP085478.1 Protein Homology CDS 4971867 4973507 . - 0 ID=cds-WP_032105229.1;Parent=gene-LI478_RS24020;Dbxref=Genbank:WP_032105229.1;Name=WP_032105229.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiB;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224476.1;locus_tag=LI478_RS24020;product=ubiquinone biosynthesis regulatory protein kinase UbiB;protein_id=WP_032105229.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4973504 4974109 . - . ID=gene-LI478_RS24025;Name=LI478_RS24025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS24025 NZ_CP085478.1 Protein Homology CDS 4973504 4974109 . - 0 ID=cds-WP_032105228.1;Parent=gene-LI478_RS24025;Dbxref=Genbank:WP_032105228.1;Name=WP_032105228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224475.1;locus_tag=LI478_RS24025;product=SCP2 domain-containing protein;protein_id=WP_032105228.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4974123 4974878 . - . ID=gene-LI478_RS24030;Name=ubiE;gbkey=Gene;gene=ubiE;gene_biotype=protein_coding;locus_tag=LI478_RS24030 NZ_CP085478.1 Protein Homology CDS 4974123 4974878 . - 0 ID=cds-WP_002883421.1;Parent=gene-LI478_RS24030;Dbxref=Genbank:WP_002883421.1;Name=WP_002883421.1;Ontology_term=GO:0008168;gbkey=CDS;gene=ubiE;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224474.1;locus_tag=LI478_RS24030;product=bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1%2C4-benzoquinol methylase UbiE;protein_id=WP_002883421.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4974949 4976397 . - . ID=gene-LI478_RS24035;Name=rmuC;gbkey=Gene;gene=rmuC;gene_biotype=protein_coding;locus_tag=LI478_RS24035 NZ_CP085478.1 Protein Homology CDS 4974949 4976397 . - 0 ID=cds-WP_004895061.1;Parent=gene-LI478_RS24035;Dbxref=Genbank:WP_004895061.1;Name=WP_004895061.1;gbkey=CDS;gene=rmuC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016947176.1;locus_tag=LI478_RS24035;product=DNA recombination protein RmuC;protein_id=WP_004895061.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4976533 4977294 . - . ID=gene-LI478_RS24040;Name=udp;gbkey=Gene;gene=udp;gene_biotype=protein_coding;locus_tag=LI478_RS24040 NZ_CP085478.1 Protein Homology CDS 4976533 4977294 . - 0 ID=cds-WP_004181652.1;Parent=gene-LI478_RS24040;Dbxref=Genbank:WP_004181652.1;Name=WP_004181652.1;Ontology_term=GO:0009116,GO:0016763;gbkey=CDS;gene=udp;go_function=pentosyltransferase activity|0016763||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224472.1;locus_tag=LI478_RS24040;product=uridine phosphorylase;protein_id=WP_004181652.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4977567 4978379 . + . ID=gene-LI478_RS24045;Name=LI478_RS24045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS24045 NZ_CP085478.1 Protein Homology CDS 4977567 4978379 . + 0 ID=cds-WP_002883417.1;Parent=gene-LI478_RS24045;Dbxref=Genbank:WP_002883417.1;Name=WP_002883417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224471.1;locus_tag=LI478_RS24045;product=dienelactone hydrolase family protein;protein_id=WP_002883417.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4978438 4980702 . - . ID=gene-LI478_RS24050;Name=metE;gbkey=Gene;gene=metE;gene_biotype=protein_coding;locus_tag=LI478_RS24050 NZ_CP085478.1 Protein Homology CDS 4978438 4980702 . - 0 ID=cds-WP_004150445.1;Parent=gene-LI478_RS24050;Dbxref=Genbank:WP_004150445.1;Name=WP_004150445.1;Ontology_term=GO:0008652,GO:0009086,GO:0003871,GO:0008270;gbkey=CDS;gene=metE;go_function=5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity|0003871||IEA,zinc ion binding|0008270||IEA;go_process=amino acid biosynthetic process|0008652||IEA,methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224470.1;locus_tag=LI478_RS24050;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;protein_id=WP_004150445.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4980950 4981903 . + . ID=gene-LI478_RS24055;Name=metR;gbkey=Gene;gene=metR;gene_biotype=protein_coding;locus_tag=LI478_RS24055 NZ_CP085478.1 Protein Homology CDS 4980950 4981903 . + 0 ID=cds-WP_004177926.1;Parent=gene-LI478_RS24055;Dbxref=Genbank:WP_004177926.1;Name=WP_004177926.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=metR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012969186.1;locus_tag=LI478_RS24055;product=HTH-type transcriptional regulator MetR;protein_id=WP_004177926.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4981791 4982690 . - . ID=gene-LI478_RS24060;Name=LI478_RS24060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS24060 NZ_CP085478.1 Protein Homology CDS 4981791 4982690 . - 0 ID=cds-WP_002883414.1;Parent=gene-LI478_RS24060;Dbxref=Genbank:WP_002883414.1;Name=WP_002883414.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224469.1;locus_tag=LI478_RS24060;product=carboxylate/amino acid/amine transporter;protein_id=WP_002883414.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4982779 4983579 . - . ID=gene-LI478_RS24065;Name=yigL;gbkey=Gene;gene=yigL;gene_biotype=protein_coding;locus_tag=LI478_RS24065 NZ_CP085478.1 Protein Homology CDS 4982779 4983579 . - 0 ID=cds-WP_004146466.1;Parent=gene-LI478_RS24065;Dbxref=Genbank:WP_004146466.1;Name=WP_004146466.1;gbkey=CDS;gene=yigL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224468.1;locus_tag=LI478_RS24065;product=sugar/pyridoxal phosphate phosphatase YigL;protein_id=WP_004146466.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4983624 4984616 . - . ID=gene-LI478_RS24070;Name=pldB;gbkey=Gene;gene=pldB;gene_biotype=protein_coding;locus_tag=LI478_RS24070 NZ_CP085478.1 Protein Homology CDS 4983624 4984616 . - 0 ID=cds-WP_002883412.1;Parent=gene-LI478_RS24070;Dbxref=Genbank:WP_002883412.1;Name=WP_002883412.1;gbkey=CDS;gene=pldB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224467.1;locus_tag=LI478_RS24070;product=lysophospholipase L2;protein_id=WP_002883412.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4984726 4985346 . + . ID=gene-LI478_RS24075;Name=rhtB;gbkey=Gene;gene=rhtB;gene_biotype=protein_coding;locus_tag=LI478_RS24075 NZ_CP085478.1 Protein Homology CDS 4984726 4985346 . + 0 ID=cds-WP_002883411.1;Parent=gene-LI478_RS24075;Dbxref=Genbank:WP_002883411.1;Name=WP_002883411.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;gene=rhtB;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224466.1;locus_tag=LI478_RS24075;product=homoserine/homoserine lactone efflux protein;protein_id=WP_002883411.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4985510 4986430 . + . ID=gene-LI478_RS24080;Name=LI478_RS24080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS24080 NZ_CP085478.1 Protein Homology CDS 4985510 4986430 . + 0 ID=cds-WP_064153660.1;Parent=gene-LI478_RS24080;Dbxref=Genbank:WP_064153660.1;Name=WP_064153660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224465.1;locus_tag=LI478_RS24080;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WP_064153660.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4986476 4987096 . - . ID=gene-LI478_RS24085;Name=rhtC;gbkey=Gene;gene=rhtC;gene_biotype=protein_coding;locus_tag=LI478_RS24085 NZ_CP085478.1 Protein Homology CDS 4986476 4987096 . - 0 ID=cds-WP_004152056.1;Parent=gene-LI478_RS24085;Dbxref=Genbank:WP_004152056.1;Name=WP_004152056.1;Ontology_term=GO:0006865;gbkey=CDS;gene=rhtC;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224464.1;locus_tag=LI478_RS24085;product=threonine export protein RhtC;protein_id=WP_004152056.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4987158 4988984 . - . ID=gene-LI478_RS24090;Name=recQ;gbkey=Gene;gene=recQ;gene_biotype=protein_coding;locus_tag=LI478_RS24090 NZ_CP085478.1 Protein Homology CDS 4987158 4988984 . - 0 ID=cds-WP_004152055.1;Parent=gene-LI478_RS24090;Dbxref=Genbank:WP_004152055.1;Name=WP_004152055.1;Ontology_term=GO:0006310,GO:0003678;gbkey=CDS;gene=recQ;go_function=DNA helicase activity|0003678||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224463.1;locus_tag=LI478_RS24090;product=ATP-dependent DNA helicase RecQ;protein_id=WP_004152055.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4989052 4989912 . - . ID=gene-LI478_RS24095;Name=pldA;gbkey=Gene;gene=pldA;gene_biotype=protein_coding;locus_tag=LI478_RS24095 NZ_CP085478.1 Protein Homology CDS 4989052 4989912 . - 0 ID=cds-WP_002883408.1;Parent=gene-LI478_RS24095;Dbxref=Genbank:WP_002883408.1;Name=WP_002883408.1;Ontology_term=GO:0006629,GO:0004620;gbkey=CDS;gene=pldA;go_function=phospholipase activity|0004620||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224462.1;locus_tag=LI478_RS24095;product=phospholipase A;protein_id=WP_002883408.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4990065 4990529 . + . ID=gene-LI478_RS24100;Name=LI478_RS24100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS24100 NZ_CP085478.1 Protein Homology CDS 4990065 4990529 . + 0 ID=cds-WP_002883404.1;Parent=gene-LI478_RS24100;Dbxref=Genbank:WP_002883404.1;Name=WP_002883404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224461.1;locus_tag=LI478_RS24100;product=thioesterase family protein;protein_id=WP_002883404.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4990578 4991471 . + . ID=gene-LI478_RS24105;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=LI478_RS24105 NZ_CP085478.1 Protein Homology CDS 4990578 4991471 . + 0 ID=cds-WP_004187777.1;Parent=gene-LI478_RS24105;Dbxref=Genbank:WP_004187777.1;Name=WP_004187777.1;Ontology_term=GO:0016020;gbkey=CDS;gene=rarD;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224460.1;locus_tag=LI478_RS24105;product=EamA family transporter RarD;protein_id=WP_004187777.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4991515 4992465 . - . ID=gene-LI478_RS24110;Name=corA;gbkey=Gene;gene=corA;gene_biotype=protein_coding;locus_tag=LI478_RS24110 NZ_CP085478.1 Protein Homology CDS 4991515 4992465 . - 0 ID=cds-WP_002883400.1;Parent=gene-LI478_RS24110;Dbxref=Genbank:WP_002883400.1;Name=WP_002883400.1;Ontology_term=GO:0006824,GO:0015693,GO:0015087,GO:0015095;gbkey=CDS;gene=corA;go_function=cobalt ion transmembrane transporter activity|0015087||IEA,magnesium ion transmembrane transporter activity|0015095||IEA;go_process=cobalt ion transport|0006824||IEA,magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000947142.1;locus_tag=LI478_RS24110;product=magnesium/cobalt transporter CorA;protein_id=WP_002883400.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4992821 4994983 . - . ID=gene-LI478_RS24115;Name=uvrD;gbkey=Gene;gene=uvrD;gene_biotype=protein_coding;gene_synonym=mutU,recL;locus_tag=LI478_RS24115 NZ_CP085478.1 Protein Homology CDS 4992821 4994983 . - 0 ID=cds-WP_064153661.1;Parent=gene-LI478_RS24115;Dbxref=Genbank:WP_064153661.1;Name=WP_064153661.1;Ontology_term=GO:0006268,GO:0003677,GO:0003678,GO:0005524,GO:0016787;gbkey=CDS;gene=uvrD;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;go_process=DNA unwinding involved in DNA replication|0006268||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224457.1;locus_tag=LI478_RS24115;product=DNA helicase II;protein_id=WP_064153661.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4995047 4995763 . - . ID=gene-LI478_RS24120;Name=yigB;gbkey=Gene;gene=yigB;gene_biotype=protein_coding;locus_tag=LI478_RS24120 NZ_CP085478.1 Protein Homology CDS 4995047 4995763 . - 0 ID=cds-WP_002883397.1;Parent=gene-LI478_RS24120;Dbxref=Genbank:WP_002883397.1;Name=WP_002883397.1;gbkey=CDS;gene=yigB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224456.1;locus_tag=LI478_RS24120;product=5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB;protein_id=WP_002883397.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4995763 4996665 . - . ID=gene-LI478_RS24125;Name=xerC;gbkey=Gene;gene=xerC;gene_biotype=protein_coding;locus_tag=LI478_RS24125 NZ_CP085478.1 Protein Homology CDS 4995763 4996665 . - 0 ID=cds-WP_002883396.1;Parent=gene-LI478_RS24125;Dbxref=Genbank:WP_002883396.1;Name=WP_002883396.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=xerC;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224455.1;locus_tag=LI478_RS24125;product=tyrosine recombinase XerC;protein_id=WP_002883396.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4996662 4997369 . - . ID=gene-LI478_RS24130;Name=LI478_RS24130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS24130 NZ_CP085478.1 Protein Homology CDS 4996662 4997369 . - 0 ID=cds-WP_002883395.1;Parent=gene-LI478_RS24130;Dbxref=Genbank:WP_002883395.1;Name=WP_002883395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224454.1;locus_tag=LI478_RS24130;product=DUF484 domain-containing protein;protein_id=WP_002883395.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4997366 4998190 . - . ID=gene-LI478_RS24135;Name=dapF;gbkey=Gene;gene=dapF;gene_biotype=protein_coding;locus_tag=LI478_RS24135 NZ_CP085478.1 Protein Homology CDS 4997366 4998190 . - 0 ID=cds-WP_002883394.1;Parent=gene-LI478_RS24135;Dbxref=Genbank:WP_002883394.1;Name=WP_002883394.1;Ontology_term=GO:0009089,GO:0008837;gbkey=CDS;gene=dapF;go_function=diaminopimelate epimerase activity|0008837||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133314.1;locus_tag=LI478_RS24135;product=diaminopimelate epimerase;protein_id=WP_002883394.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4998226 4998429 . - . ID=gene-LI478_RS24140;Name=LI478_RS24140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS24140 NZ_CP085478.1 Protein Homology CDS 4998226 4998429 . - 0 ID=cds-WP_002883392.1;Parent=gene-LI478_RS24140;Dbxref=Genbank:WP_002883392.1;Name=WP_002883392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224452.1;locus_tag=LI478_RS24140;product=lipoprotein;protein_id=WP_002883392.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4998576 4998896 . + . ID=gene-LI478_RS24145;Name=cyaY;gbkey=Gene;gene=cyaY;gene_biotype=protein_coding;locus_tag=LI478_RS24145 NZ_CP085478.1 Protein Homology CDS 4998576 4998896 . + 0 ID=cds-WP_002883389.1;Parent=gene-LI478_RS24145;Dbxref=Genbank:WP_002883389.1;Name=WP_002883389.1;Ontology_term=GO:0016226,GO:0005506;gbkey=CDS;gene=cyaY;go_function=iron ion binding|0005506||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000999950.1;locus_tag=LI478_RS24145;product=iron donor protein CyaY;protein_id=WP_002883389.1;transl_table=11 NZ_CP085478.1 RefSeq gene 4998945 5001497 . - . ID=gene-LI478_RS24150;Name=cyaA;gbkey=Gene;gene=cyaA;gene_biotype=protein_coding;locus_tag=LI478_RS24150 NZ_CP085478.1 Protein Homology CDS 4998945 5001497 . - 0 ID=cds-WP_002883383.1;Parent=gene-LI478_RS24150;Dbxref=Genbank:WP_002883383.1;Name=WP_002883383.1;Ontology_term=GO:0006171,GO:0004016;gbkey=CDS;gene=cyaA;go_function=adenylate cyclase activity|0004016||IEA;go_process=cAMP biosynthetic process|0006171||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224450.1;locus_tag=LI478_RS24150;product=class I adenylate cyclase;protein_id=WP_002883383.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5001855 5002796 . + . ID=gene-LI478_RS24155;Name=hemC;gbkey=Gene;gene=hemC;gene_biotype=protein_coding;locus_tag=LI478_RS24155 NZ_CP085478.1 Protein Homology CDS 5001855 5002796 . + 0 ID=cds-WP_002883381.1;Parent=gene-LI478_RS24155;Dbxref=Genbank:WP_002883381.1;Name=WP_002883381.1;Ontology_term=GO:0006779,GO:0004418,GO:0005737;gbkey=CDS;gene=hemC;go_component=cytoplasm|0005737||IEA;go_function=hydroxymethylbilane synthase activity|0004418||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224448.1;locus_tag=LI478_RS24155;product=hydroxymethylbilane synthase;protein_id=WP_002883381.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5002793 5003533 . + . ID=gene-LI478_RS24160;Name=hemD;gbkey=Gene;gene=hemD;gene_biotype=protein_coding;locus_tag=LI478_RS24160 NZ_CP085478.1 Protein Homology CDS 5002793 5003533 . + 0 ID=cds-WP_002883380.1;Parent=gene-LI478_RS24160;Dbxref=Genbank:WP_002883380.1;Name=WP_002883380.1;Ontology_term=GO:0006780,GO:0004852;gbkey=CDS;gene=hemD;go_function=uroporphyrinogen-III synthase activity|0004852||IEA;go_process=uroporphyrinogen III biosynthetic process|0006780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224447.1;locus_tag=LI478_RS24160;product=uroporphyrinogen-III synthase;protein_id=WP_002883380.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5003555 5004736 . + . ID=gene-LI478_RS24165;Name=hemX;gbkey=Gene;gene=hemX;gene_biotype=protein_coding;locus_tag=LI478_RS24165 NZ_CP085478.1 Protein Homology CDS 5003555 5004736 . + 0 ID=cds-WP_004150429.1;Parent=gene-LI478_RS24165;Dbxref=Genbank:WP_004150429.1;Name=WP_004150429.1;gbkey=CDS;gene=hemX;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224446.1;locus_tag=LI478_RS24165;product=uroporphyrinogen-III C-methyltransferase;protein_id=WP_004150429.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5004740 5005936 . + . ID=gene-LI478_RS24170;Name=hemY;gbkey=Gene;gene=hemY;gene_biotype=protein_coding;locus_tag=LI478_RS24170 NZ_CP085478.1 Protein Homology CDS 5004740 5005936 . + 0 ID=cds-WP_004150428.1;Parent=gene-LI478_RS24170;Dbxref=Genbank:WP_004150428.1;Name=WP_004150428.1;Ontology_term=GO:0042168,GO:0005515,GO:0016020;gbkey=CDS;gene=hemY;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA;go_process=heme metabolic process|0042168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224445.1;locus_tag=LI478_RS24170;product=protoheme IX biogenesis protein HemY;protein_id=WP_004150428.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5006398 5006474 . - . ID=gene-LI478_RS24175;Name=LI478_RS24175;gbkey=Gene;gene_biotype=tRNA;locus_tag=LI478_RS24175 NZ_CP085478.1 tRNAscan-SE tRNA 5006398 5006474 . - . ID=rna-LI478_RS24175;Parent=gene-LI478_RS24175;anticodon=(pos:complement(5006438..5006440));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS24175;product=tRNA-Pro NZ_CP085478.1 tRNAscan-SE exon 5006398 5006474 . - . ID=exon-LI478_RS24175-1;Parent=rna-LI478_RS24175;anticodon=(pos:complement(5006438..5006440));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS24175;product=tRNA-Pro NZ_CP085478.1 RefSeq gene 5006517 5006603 . - . ID=gene-LI478_RS24180;Name=LI478_RS24180;gbkey=Gene;gene_biotype=tRNA;locus_tag=LI478_RS24180 NZ_CP085478.1 tRNAscan-SE tRNA 5006517 5006603 . - . ID=rna-LI478_RS24180;Parent=gene-LI478_RS24180;anticodon=(pos:complement(5006567..5006569));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS24180;product=tRNA-Leu NZ_CP085478.1 tRNAscan-SE exon 5006517 5006603 . - . ID=exon-LI478_RS24180-1;Parent=rna-LI478_RS24180;anticodon=(pos:complement(5006567..5006569));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS24180;product=tRNA-Leu NZ_CP085478.1 RefSeq gene 5006627 5006702 . - . ID=gene-LI478_RS24185;Name=LI478_RS24185;gbkey=Gene;gene_biotype=tRNA;locus_tag=LI478_RS24185 NZ_CP085478.1 tRNAscan-SE tRNA 5006627 5006702 . - . ID=rna-LI478_RS24185;Parent=gene-LI478_RS24185;anticodon=(pos:complement(5006667..5006669));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS24185;product=tRNA-His NZ_CP085478.1 tRNAscan-SE exon 5006627 5006702 . - . ID=exon-LI478_RS24185-1;Parent=rna-LI478_RS24185;anticodon=(pos:complement(5006667..5006669));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS24185;product=tRNA-His NZ_CP085478.1 RefSeq gene 5006758 5006834 . - . ID=gene-LI478_RS24190;Name=LI478_RS24190;gbkey=Gene;gene_biotype=tRNA;locus_tag=LI478_RS24190 NZ_CP085478.1 tRNAscan-SE tRNA 5006758 5006834 . - . ID=rna-LI478_RS24190;Parent=gene-LI478_RS24190;anticodon=(pos:complement(5006798..5006800));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS24190;product=tRNA-Arg NZ_CP085478.1 tRNAscan-SE exon 5006758 5006834 . - . ID=exon-LI478_RS24190-1;Parent=rna-LI478_RS24190;anticodon=(pos:complement(5006798..5006800));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS24190;product=tRNA-Arg NZ_CP085478.1 RefSeq gene 5006937 5008322 . - . ID=gene-LI478_RS24195;Name=LI478_RS24195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS24195 NZ_CP085478.1 Protein Homology CDS 5006937 5008322 . - 0 ID=cds-WP_002883322.1;Parent=gene-LI478_RS24195;Dbxref=Genbank:WP_002883322.1;Name=WP_002883322.1;Ontology_term=GO:0006865,GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224443.1;locus_tag=LI478_RS24195;product=amino acid permease;protein_id=WP_002883322.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5008528 5009268 . - . ID=gene-LI478_RS24200;Name=rffM;gbkey=Gene;gene=rffM;gene_biotype=protein_coding;locus_tag=LI478_RS24200 NZ_CP085478.1 Protein Homology CDS 5008528 5009268 . - 0 ID=cds-WP_004186366.1;Parent=gene-LI478_RS24200;Dbxref=Genbank:WP_004186366.1;Name=WP_004186366.1;Ontology_term=GO:0016740;gbkey=CDS;gene=rffM;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224442.1;locus_tag=LI478_RS24200;product=lipopolysaccharide N-acetylmannosaminouronosyltransferase;protein_id=WP_004186366.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5009280 5010626 . - . ID=gene-LI478_RS24205;Name=wzyE;gbkey=Gene;gene=wzyE;gene_biotype=protein_coding;locus_tag=LI478_RS24205 NZ_CP085478.1 Protein Homology CDS 5009280 5010626 . - 0 ID=cds-WP_004146500.1;Parent=gene-LI478_RS24205;Dbxref=Genbank:WP_004146500.1;Name=WP_004146500.1;Ontology_term=GO:0009246,GO:0016020;gbkey=CDS;gene=wzyE;go_component=membrane|0016020||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224441.1;locus_tag=LI478_RS24205;product=ECA oligosaccharide polymerase;protein_id=WP_004146500.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5010623 5011699 . - . ID=gene-LI478_RS24210;Name=LI478_RS24210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS24210 NZ_CP085478.1 Protein Homology CDS 5010623 5011699 . - 0 ID=cds-WP_021440992.1;Parent=gene-LI478_RS24210;Dbxref=Genbank:WP_021440992.1;Name=WP_021440992.1;Ontology_term=GO:0036065,GO:0008417;gbkey=CDS;go_function=fucosyltransferase activity|0008417||IEA;go_process=fucosylation|0036065||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224440.1;locus_tag=LI478_RS24210;product=TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase;protein_id=WP_021440992.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5011696 5012946 . - . ID=gene-LI478_RS24215;Name=wzxE;gbkey=Gene;gene=wzxE;gene_biotype=protein_coding;locus_tag=LI478_RS24215 NZ_CP085478.1 Protein Homology CDS 5011696 5012946 . - 0 ID=cds-WP_002883312.1;Parent=gene-LI478_RS24215;Dbxref=Genbank:WP_002883312.1;Name=WP_002883312.1;Ontology_term=GO:0009246,GO:0016020;gbkey=CDS;gene=wzxE;go_component=membrane|0016020||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224439.1;locus_tag=LI478_RS24215;product=lipid III flippase WzxE;protein_id=WP_002883312.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5012948 5014078 . - . ID=gene-LI478_RS24220;Name=rffA;gbkey=Gene;gene=rffA;gene_biotype=protein_coding;gene_synonym=fcnA,wecE;locus_tag=LI478_RS24220 NZ_CP085478.1 Protein Homology CDS 5012948 5014078 . - 0 ID=cds-WP_002883310.1;Parent=gene-LI478_RS24220;Dbxref=Genbank:WP_002883310.1;Name=WP_002883310.1;Ontology_term=GO:0009246,GO:0019180;gbkey=CDS;gene=rffA;go_function=dTDP-4-amino-4%2C6-dideoxygalactose transaminase activity|0019180||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224438.1;locus_tag=LI478_RS24220;product=dTDP-4-amino-4%2C6-dideoxygalactose transaminase;protein_id=WP_002883310.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5014084 5014758 . - . ID=gene-LI478_RS24225;Name=rffC;gbkey=Gene;gene=rffC;gene_biotype=protein_coding;gene_synonym=wecD;locus_tag=LI478_RS24225 NZ_CP085478.1 Protein Homology CDS 5014084 5014758 . - 0 ID=cds-WP_032415960.1;Parent=gene-LI478_RS24225;Dbxref=Genbank:WP_032415960.1;Name=WP_032415960.1;Ontology_term=GO:0008080;gbkey=CDS;gene=rffC;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224437.1;locus_tag=LI478_RS24225;product=dTDP-4-amino-4%2C6-dideoxy-D-galactose acyltransferase;protein_id=WP_032415960.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5014736 5015617 . - . ID=gene-LI478_RS24230;Name=rfbA;gbkey=Gene;gene=rfbA;gene_biotype=protein_coding;locus_tag=LI478_RS24230 NZ_CP085478.1 Protein Homology CDS 5014736 5015617 . - 0 ID=cds-WP_002883307.1;Parent=gene-LI478_RS24230;Dbxref=Genbank:WP_002883307.1;Name=WP_002883307.1;Ontology_term=GO:0009243,GO:0019305,GO:0008879;gbkey=CDS;gene=rfbA;go_function=glucose-1-phosphate thymidylyltransferase activity|0008879||IEA;go_process=O antigen biosynthetic process|0009243||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224436.1;locus_tag=LI478_RS24230;product=glucose-1-phosphate thymidylyltransferase RfbA;protein_id=WP_002883307.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5015636 5016703 . - . ID=gene-LI478_RS24235;Name=rffG;gbkey=Gene;gene=rffG;gene_biotype=protein_coding;locus_tag=LI478_RS24235 NZ_CP085478.1 Protein Homology CDS 5015636 5016703 . - 0 ID=cds-WP_032415958.1;Parent=gene-LI478_RS24235;Dbxref=Genbank:WP_032415958.1;Name=WP_032415958.1;Ontology_term=GO:0009225,GO:0008460;gbkey=CDS;gene=rffG;go_function=dTDP-glucose 4%2C6-dehydratase activity|0008460||IEA;go_process=nucleotide-sugar metabolic process|0009225||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224435.1;locus_tag=LI478_RS24235;product=dTDP-glucose 4%2C6-dehydratase;protein_id=WP_032415958.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5016700 5017962 . - . ID=gene-LI478_RS24240;Name=wecC;gbkey=Gene;gene=wecC;gene_biotype=protein_coding;locus_tag=LI478_RS24240 NZ_CP085478.1 Protein Homology CDS 5016700 5017962 . - 0 ID=cds-WP_004186361.1;Parent=gene-LI478_RS24240;Dbxref=Genbank:WP_004186361.1;Name=WP_004186361.1;Ontology_term=GO:0009246,GO:0051287,GO:0089714;gbkey=CDS;gene=wecC;go_function=NAD binding|0051287||IEA,UDP-N-acetyl-D-mannosamine dehydrogenase activity|0089714||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224434.1;locus_tag=LI478_RS24240;product=UDP-N-acetyl-D-mannosamine dehydrogenase;protein_id=WP_004186361.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5017959 5019089 . - . ID=gene-LI478_RS24245;Name=wecB;gbkey=Gene;gene=wecB;gene_biotype=protein_coding;locus_tag=LI478_RS24245 NZ_CP085478.1 Protein Homology CDS 5017959 5019089 . - 0 ID=cds-WP_002883297.1;Parent=gene-LI478_RS24245;Dbxref=Genbank:WP_002883297.1;Name=WP_002883297.1;Ontology_term=GO:0009103,GO:0008761;gbkey=CDS;gene=wecB;go_function=UDP-N-acetylglucosamine 2-epimerase activity|0008761||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026253.1;locus_tag=LI478_RS24245;product=UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing);protein_id=WP_002883297.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5019146 5020192 . - . ID=gene-LI478_RS24250;Name=wzzE;gbkey=Gene;gene=wzzE;gene_biotype=protein_coding;locus_tag=LI478_RS24250 NZ_CP085478.1 Protein Homology CDS 5019146 5020192 . - 0 ID=cds-WP_002883296.1;Parent=gene-LI478_RS24250;Dbxref=Genbank:WP_002883296.1;Name=WP_002883296.1;Ontology_term=GO:0009103,GO:0009246,GO:0016020;gbkey=CDS;gene=wzzE;go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA,enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462809.1;locus_tag=LI478_RS24250;product=ECA polysaccharide chain length modulation protein;protein_id=WP_002883296.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5020206 5021309 . - . ID=gene-LI478_RS24255;Name=wecA;gbkey=Gene;gene=wecA;gene_biotype=protein_coding;locus_tag=LI478_RS24255 NZ_CP085478.1 Protein Homology CDS 5020206 5021309 . - 0 ID=cds-WP_002883295.1;Parent=gene-LI478_RS24255;Dbxref=Genbank:WP_002883295.1;Name=WP_002883295.1;Ontology_term=GO:0009246,GO:0016780;gbkey=CDS;gene=wecA;go_function=phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224431.1;locus_tag=LI478_RS24255;product=UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase;protein_id=WP_002883295.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5021550 5022809 . - . ID=gene-LI478_RS24260;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=LI478_RS24260 NZ_CP085478.1 Protein Homology CDS 5021550 5022809 . - 0 ID=cds-WP_002883293.1;Parent=gene-LI478_RS24260;Dbxref=Genbank:WP_002883293.1;Name=WP_002883293.1;Ontology_term=GO:0006353,GO:0004386,GO:0008186;gbkey=CDS;gene=rho;go_function=helicase activity|0004386||IEA,ATP-dependent activity%2C acting on RNA|0008186||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017492510.1;locus_tag=LI478_RS24260;product=transcription termination factor Rho;protein_id=WP_002883293.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5023140 5023469 . - . ID=gene-LI478_RS24265;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=LI478_RS24265 NZ_CP085478.1 Protein Homology CDS 5023140 5023469 . - 0 ID=cds-WP_002883224.1;Parent=gene-LI478_RS24265;Dbxref=Genbank:WP_002883224.1;Name=WP_002883224.1;Ontology_term=GO:0006662,GO:0015035;gbkey=CDS;gene=trxA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=glycerol ether metabolic process|0006662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017375425.1;locus_tag=LI478_RS24265;product=thioredoxin TrxA;protein_id=WP_002883224.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5023811 5025076 . + . ID=gene-LI478_RS24270;Name=rhlB;gbkey=Gene;gene=rhlB;gene_biotype=protein_coding;locus_tag=LI478_RS24270 NZ_CP085478.1 Protein Homology CDS 5023811 5025076 . + 0 ID=cds-WP_002883222.1;Parent=gene-LI478_RS24270;Dbxref=Genbank:WP_002883222.1;Name=WP_002883222.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=rhlB;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224428.1;locus_tag=LI478_RS24270;product=ATP-dependent RNA helicase RhlB;protein_id=WP_002883222.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5025195 5026703 . + . ID=gene-LI478_RS24275;Name=gppA;gbkey=Gene;gene=gppA;gene_biotype=protein_coding;locus_tag=LI478_RS24275 NZ_CP085478.1 Protein Homology CDS 5025195 5026703 . + 0 ID=cds-WP_004150419.1;Parent=gene-LI478_RS24275;Dbxref=Genbank:WP_004150419.1;Name=WP_004150419.1;Ontology_term=GO:0015974,GO:0008894;gbkey=CDS;gene=gppA;go_function=guanosine-5'-triphosphate%2C3'-diphosphate diphosphatase activity|0008894||IEA;go_process=guanosine pentaphosphate catabolic process|0015974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224427.1;locus_tag=LI478_RS24275;product=guanosine-5'-triphosphate%2C3'-diphosphate diphosphatase;protein_id=WP_004150419.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5026723 5027649 . + . ID=gene-LI478_RS24280;Name=LI478_RS24280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS24280 NZ_CP085478.1 Protein Homology CDS 5026723 5027649 . + 0 ID=cds-WP_002883211.1;Parent=gene-LI478_RS24280;Dbxref=Genbank:WP_002883211.1;Name=WP_002883211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224426.1;locus_tag=LI478_RS24280;product=LysR family transcriptional regulator;protein_id=WP_002883211.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5027780 5028778 . + . ID=gene-LI478_RS24285;Name=LI478_RS24285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS24285 NZ_CP085478.1 Protein Homology CDS 5027780 5028778 . + 0 ID=cds-WP_004181642.1;Parent=gene-LI478_RS24285;Dbxref=Genbank:WP_004181642.1;Name=WP_004181642.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224425.1;locus_tag=LI478_RS24285;product=amidohydrolase family protein;protein_id=WP_004181642.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5028841 5029563 . + . ID=gene-LI478_RS24290;Name=LI478_RS24290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS24290 NZ_CP085478.1 Protein Homology CDS 5028841 5029563 . + 0 ID=cds-WP_002883185.1;Parent=gene-LI478_RS24290;Dbxref=Genbank:WP_002883185.1;Name=WP_002883185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224424.1;locus_tag=LI478_RS24290;product=DUF554 domain-containing protein;protein_id=WP_002883185.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5029568 5031589 . - . ID=gene-LI478_RS24295;Name=rep;gbkey=Gene;gene=rep;gene_biotype=protein_coding;locus_tag=LI478_RS24295 NZ_CP085478.1 Protein Homology CDS 5029568 5031589 . - 0 ID=cds-WP_004181641.1;Parent=gene-LI478_RS24295;Dbxref=Genbank:WP_004181641.1;Name=WP_004181641.1;Ontology_term=GO:0006268,GO:0003678;gbkey=CDS;gene=rep;go_function=DNA helicase activity|0003678||IEA;go_process=DNA unwinding involved in DNA replication|0006268||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224423.1;locus_tag=LI478_RS24295;product=DNA helicase Rep;protein_id=WP_004181641.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5031702 5031983 . + . ID=gene-LI478_RS24300;Name=ppiC;gbkey=Gene;gene=ppiC;gene_biotype=protein_coding;locus_tag=LI478_RS24300 NZ_CP085478.1 Protein Homology CDS 5031702 5031983 . + 0 ID=cds-WP_002883181.1;Parent=gene-LI478_RS24300;Dbxref=Genbank:WP_002883181.1;Name=WP_002883181.1;gbkey=CDS;gene=ppiC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224422.1;locus_tag=LI478_RS24300;product=peptidylprolyl isomerase PpiC;protein_id=WP_002883181.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5032035 5032316 . + . ID=gene-LI478_RS24305;Name=ppiC;gbkey=Gene;gene=ppiC;gene_biotype=protein_coding;locus_tag=LI478_RS24305 NZ_CP085478.1 Protein Homology CDS 5032035 5032316 . + 0 ID=cds-WP_002883180.1;Parent=gene-LI478_RS24305;Dbxref=Genbank:WP_002883180.1;Name=WP_002883180.1;gbkey=CDS;gene=ppiC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224421.1;locus_tag=LI478_RS24305;product=peptidylprolyl isomerase PpiC;protein_id=WP_002883180.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5032520 5033995 . - . ID=gene-LI478_RS24310;Name=ilvC;gbkey=Gene;gene=ilvC;gene_biotype=protein_coding;locus_tag=LI478_RS24310 NZ_CP085478.1 Protein Homology CDS 5032520 5033995 . - 0 ID=cds-WP_002883178.1;Parent=gene-LI478_RS24310;Dbxref=Genbank:WP_002883178.1;Name=WP_002883178.1;Ontology_term=GO:0009082,GO:0004455;gbkey=CDS;gene=ilvC;go_function=ketol-acid reductoisomerase activity|0004455||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133363.1;locus_tag=LI478_RS24310;product=ketol-acid reductoisomerase;protein_id=WP_002883178.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5034148 5035038 . + . ID=gene-LI478_RS24315;Name=ilvY;gbkey=Gene;gene=ilvY;gene_biotype=protein_coding;locus_tag=LI478_RS24315 NZ_CP085478.1 Protein Homology CDS 5034148 5035038 . + 0 ID=cds-WP_002883176.1;Parent=gene-LI478_RS24315;Dbxref=Genbank:WP_002883176.1;Name=WP_002883176.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ilvY;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224419.1;locus_tag=LI478_RS24315;product=HTH-type transcriptional activator IlvY;protein_id=WP_002883176.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5035035 5036579 . - . ID=gene-LI478_RS24320;Name=ilvA;gbkey=Gene;gene=ilvA;gene_biotype=protein_coding;locus_tag=LI478_RS24320 NZ_CP085478.1 Protein Homology CDS 5035035 5036579 . - 0 ID=cds-WP_002883174.1;Parent=gene-LI478_RS24320;Dbxref=Genbank:WP_002883174.1;Name=WP_002883174.1;Ontology_term=GO:0009097,GO:0004794;gbkey=CDS;gene=ilvA;go_function=L-threonine ammonia-lyase activity|0004794||IEA;go_process=isoleucine biosynthetic process|0009097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312733.1;locus_tag=LI478_RS24320;product=threonine ammonia-lyase%2C biosynthetic;protein_id=WP_002883174.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5036582 5038432 . - . ID=gene-LI478_RS24325;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=LI478_RS24325 NZ_CP085478.1 Protein Homology CDS 5036582 5038432 . - 0 ID=cds-WP_002883173.1;Parent=gene-LI478_RS24325;Dbxref=Genbank:WP_002883173.1;Name=WP_002883173.1;Ontology_term=GO:0009082,GO:0004160;gbkey=CDS;gene=ilvD;go_function=dihydroxy-acid dehydratase activity|0004160||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133366.1;locus_tag=LI478_RS24325;product=dihydroxy-acid dehydratase;protein_id=WP_002883173.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5038493 5039422 . - . ID=gene-LI478_RS24330;Name=ilvE;gbkey=Gene;gene=ilvE;gene_biotype=protein_coding;locus_tag=LI478_RS24330 NZ_CP085478.1 Protein Homology CDS 5038493 5039422 . - 0 ID=cds-WP_002883171.1;Parent=gene-LI478_RS24330;Dbxref=Genbank:WP_002883171.1;Name=WP_002883171.1;Ontology_term=GO:0009082,GO:0004084;gbkey=CDS;gene=ilvE;go_function=branched-chain-amino-acid transaminase activity|0004084||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224416.1;locus_tag=LI478_RS24330;product=branched-chain-amino-acid transaminase;protein_id=WP_002883171.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5039439 5039696 . - . ID=gene-LI478_RS24335;Name=ilvM;gbkey=Gene;gene=ilvM;gene_biotype=protein_coding;locus_tag=LI478_RS24335 NZ_CP085478.1 Protein Homology CDS 5039439 5039696 . - 0 ID=cds-WP_002883170.1;Parent=gene-LI478_RS24335;Dbxref=Genbank:WP_002883170.1;Name=WP_002883170.1;gbkey=CDS;gene=ilvM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224415.1;locus_tag=LI478_RS24335;product=acetolactate synthase 2 small subunit;protein_id=WP_002883170.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5039693 5041339 . - . ID=gene-LI478_RS24340;Name=ilvG;gbkey=Gene;gene=ilvG;gene_biotype=protein_coding;locus_tag=LI478_RS24340 NZ_CP085478.1 Protein Homology CDS 5039693 5041339 . - 0 ID=cds-WP_064153732.1;Parent=gene-LI478_RS24340;Dbxref=Genbank:WP_064153732.1;Name=WP_064153732.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvG;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001012636.1;locus_tag=LI478_RS24340;product=acetolactate synthase 2 catalytic subunit;protein_id=WP_064153732.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5041480 5041578 . - . ID=gene-LI478_RS24350;Name=ilvL;gbkey=Gene;gene=ilvL;gene_biotype=protein_coding;locus_tag=LI478_RS24350 NZ_CP085478.1 Protein Homology CDS 5041480 5041578 . - 0 ID=cds-WP_001311244.1;Parent=gene-LI478_RS24350;Dbxref=Genbank:WP_001311244.1;Name=WP_001311244.1;gbkey=CDS;gene=ilvL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312728.1;locus_tag=LI478_RS24350;product=ilv operon leader peptide;protein_id=WP_001311244.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5041933 5043453 . + . ID=gene-LI478_RS24355;Name=LI478_RS24355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS24355 NZ_CP085478.1 Protein Homology CDS 5041933 5043453 . + 0 ID=cds-WP_002883134.1;Parent=gene-LI478_RS24355;Dbxref=Genbank:WP_002883134.1;Name=WP_002883134.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224412.1;locus_tag=LI478_RS24355;product=YifB family Mg chelatase-like AAA ATPase;protein_id=WP_002883134.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5043478 5043816 . - . ID=gene-LI478_RS24360;Name=LI478_RS24360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS24360 NZ_CP085478.1 Protein Homology CDS 5043478 5043816 . - 0 ID=cds-WP_004146520.1;Parent=gene-LI478_RS24360;Dbxref=Genbank:WP_004146520.1;Name=WP_004146520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224411.1;locus_tag=LI478_RS24360;product=DUF413 domain-containing protein;protein_id=WP_004146520.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5043935 5044756 . + . ID=gene-LI478_RS24365;Name=hdfR;gbkey=Gene;gene=hdfR;gene_biotype=protein_coding;locus_tag=LI478_RS24365 NZ_CP085478.1 Protein Homology CDS 5043935 5044756 . + 0 ID=cds-WP_004177958.1;Parent=gene-LI478_RS24365;Dbxref=Genbank:WP_004177958.1;Name=WP_004177958.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=hdfR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224410.1;locus_tag=LI478_RS24365;product=HTH-type transcriptional regulator HdfR;protein_id=WP_004177958.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5044866 5044941 . - . ID=gene-LI478_RS24370;Name=LI478_RS24370;gbkey=Gene;gene_biotype=tRNA;locus_tag=LI478_RS24370 NZ_CP085478.1 tRNAscan-SE tRNA 5044866 5044941 . - . ID=rna-LI478_RS24370;Parent=gene-LI478_RS24370;anticodon=(pos:complement(5044906..5044908));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS24370;product=tRNA-Trp NZ_CP085478.1 tRNAscan-SE exon 5044866 5044941 . - . ID=exon-LI478_RS24370-1;Parent=rna-LI478_RS24370;anticodon=(pos:complement(5044906..5044908));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS24370;product=tRNA-Trp NZ_CP085478.1 RefSeq gene 5044995 5045071 . - . ID=gene-LI478_RS24375;Name=LI478_RS24375;gbkey=Gene;gene_biotype=tRNA;locus_tag=LI478_RS24375 NZ_CP085478.1 tRNAscan-SE tRNA 5044995 5045071 . - . ID=rna-LI478_RS24375;Parent=gene-LI478_RS24375;anticodon=(pos:complement(5045035..5045037));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS24375;product=tRNA-Asp NZ_CP085478.1 tRNAscan-SE exon 5044995 5045071 . - . ID=exon-LI478_RS24375-1;Parent=rna-LI478_RS24375;anticodon=(pos:complement(5045035..5045037));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS24375;product=tRNA-Asp NZ_CP085478.1 RefSeq gene 5045129 5045244 . - . ID=gene-LI478_RS24380;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=LI478_RS24380 NZ_CP085478.1 cmsearch rRNA 5045129 5045244 . - . ID=rna-LI478_RS24380;Parent=gene-LI478_RS24380;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LI478_RS24380;product=5S ribosomal RNA NZ_CP085478.1 cmsearch exon 5045129 5045244 . - . ID=exon-LI478_RS24380-1;Parent=rna-LI478_RS24380;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LI478_RS24380;product=5S ribosomal RNA NZ_CP085478.1 RefSeq gene 5045344 5048245 . - . ID=gene-LI478_RS24385;Name=LI478_RS24385;gbkey=Gene;gene_biotype=rRNA;locus_tag=LI478_RS24385 NZ_CP085478.1 cmsearch rRNA 5045344 5048245 . - . ID=rna-LI478_RS24385;Parent=gene-LI478_RS24385;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LI478_RS24385;product=23S ribosomal RNA NZ_CP085478.1 cmsearch exon 5045344 5048245 . - . ID=exon-LI478_RS24385-1;Parent=rna-LI478_RS24385;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LI478_RS24385;product=23S ribosomal RNA NZ_CP085478.1 RefSeq gene 5048415 5048490 . - . ID=gene-LI478_RS24390;Name=LI478_RS24390;gbkey=Gene;gene_biotype=tRNA;locus_tag=LI478_RS24390 NZ_CP085478.1 tRNAscan-SE tRNA 5048415 5048490 . - . ID=rna-LI478_RS24390;Parent=gene-LI478_RS24390;anticodon=(pos:complement(5048455..5048457));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS24390;product=tRNA-Ala NZ_CP085478.1 tRNAscan-SE exon 5048415 5048490 . - . ID=exon-LI478_RS24390-1;Parent=rna-LI478_RS24390;anticodon=(pos:complement(5048455..5048457));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS24390;product=tRNA-Ala NZ_CP085478.1 RefSeq gene 5048527 5048603 . - . ID=gene-LI478_RS24395;Name=LI478_RS24395;gbkey=Gene;gene_biotype=tRNA;locus_tag=LI478_RS24395 NZ_CP085478.1 tRNAscan-SE tRNA 5048527 5048603 . - . ID=rna-LI478_RS24395;Parent=gene-LI478_RS24395;anticodon=(pos:complement(5048567..5048569));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS24395;product=tRNA-Ile NZ_CP085478.1 tRNAscan-SE exon 5048527 5048603 . - . ID=exon-LI478_RS24395-1;Parent=rna-LI478_RS24395;anticodon=(pos:complement(5048567..5048569));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS24395;product=tRNA-Ile NZ_CP085478.1 RefSeq gene 5048673 5050212 . - . ID=gene-LI478_RS24400;Name=LI478_RS24400;gbkey=Gene;gene_biotype=rRNA;locus_tag=LI478_RS24400 NZ_CP085478.1 cmsearch rRNA 5048673 5050212 . - . ID=rna-LI478_RS24400;Parent=gene-LI478_RS24400;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LI478_RS24400;product=16S ribosomal RNA NZ_CP085478.1 cmsearch exon 5048673 5050212 . - . ID=exon-LI478_RS24400-1;Parent=rna-LI478_RS24400;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LI478_RS24400;product=16S ribosomal RNA NZ_CP085478.1 RefSeq gene 5050609 5051460 . - . ID=gene-LI478_RS24405;Name=murI;gbkey=Gene;gene=murI;gene_biotype=protein_coding;locus_tag=LI478_RS24405 NZ_CP085478.1 Protein Homology CDS 5050609 5051460 . - 0 ID=cds-WP_002883026.1;Parent=gene-LI478_RS24405;Dbxref=Genbank:WP_002883026.1;Name=WP_002883026.1;Ontology_term=GO:0006807,GO:0008881;gbkey=CDS;gene=murI;go_function=glutamate racemase activity|0008881||IEA;go_process=nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008807849.1;locus_tag=LI478_RS24405;product=glutamate racemase;protein_id=WP_002883026.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5051405 5053243 . - . ID=gene-LI478_RS24410;Name=btuB;gbkey=Gene;gene=btuB;gene_biotype=protein_coding;locus_tag=LI478_RS24410 NZ_CP085478.1 Protein Homology CDS 5051405 5053243 . - 0 ID=cds-WP_032415951.1;Parent=gene-LI478_RS24410;Dbxref=Genbank:WP_032415951.1;Name=WP_032415951.1;Ontology_term=GO:0015889,GO:0015420;gbkey=CDS;gene=btuB;go_function=ABC-type vitamin B12 transporter activity|0015420||IEA;go_process=cobalamin transport|0015889||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224408.1;locus_tag=LI478_RS24410;product=TonB-dependent vitamin B12 receptor BtuB;protein_id=WP_032415951.1;transl_table=11 NZ_CP085478.1 cmsearch riboswitch 5053308 5053495 . - . ID=id-NZ_CP085478.1:5053308..5053495;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_CP085478.1 RefSeq gene 5053610 5054710 . + . ID=gene-LI478_RS24415;Name=trmA;gbkey=Gene;gene=trmA;gene_biotype=protein_coding;locus_tag=LI478_RS24415 NZ_CP085478.1 Protein Homology CDS 5053610 5054710 . + 0 ID=cds-WP_064153640.1;Parent=gene-LI478_RS24415;Dbxref=Genbank:WP_064153640.1;Name=WP_064153640.1;Ontology_term=GO:0006400,GO:0030697;gbkey=CDS;gene=trmA;go_function=S-adenosylmethionine-dependent tRNA (m5U54) methyltransferase activity|0030697||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224407.1;locus_tag=LI478_RS24415;product=tRNA (uridine(54)-C5)-methyltransferase TrmA;protein_id=WP_064153640.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5054762 5055121 . - . ID=gene-LI478_RS24420;Name=LI478_RS24420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS24420 NZ_CP085478.1 Protein Homology CDS 5054762 5055121 . - 0 ID=cds-WP_002883021.1;Parent=gene-LI478_RS24420;Dbxref=Genbank:WP_002883021.1;Name=WP_002883021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224406.1;locus_tag=LI478_RS24420;product=YijD family membrane protein;protein_id=WP_002883021.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5055137 5055772 . - . ID=gene-LI478_RS24425;Name=fabR;gbkey=Gene;gene=fabR;gene_biotype=protein_coding;locus_tag=LI478_RS24425 NZ_CP085478.1 Protein Homology CDS 5055137 5055772 . - 0 ID=cds-WP_004151856.1;Parent=gene-LI478_RS24425;Dbxref=Genbank:WP_004151856.1;Name=WP_004151856.1;Ontology_term=GO:0003677;gbkey=CDS;gene=fabR;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224405.1;locus_tag=LI478_RS24425;product=HTH-type transcriptional repressor FabR;protein_id=WP_004151856.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5055969 5057369 . + . ID=gene-LI478_RS24430;Name=sthA;gbkey=Gene;gene=sthA;gene_biotype=protein_coding;locus_tag=LI478_RS24430 NZ_CP085478.1 Protein Homology CDS 5055969 5057369 . + 0 ID=cds-WP_002883016.1;Parent=gene-LI478_RS24430;Dbxref=Genbank:WP_002883016.1;Name=WP_002883016.1;Ontology_term=GO:0045454,GO:0003957,GO:0050660;gbkey=CDS;gene=sthA;go_function=NAD(P)+ transhydrogenase (B-specific) activity|0003957||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463005.1;locus_tag=LI478_RS24430;product=Si-specific NAD(P)(+) transhydrogenase;protein_id=WP_002883016.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5057352 5058269 . - . ID=gene-LI478_RS24435;Name=oxyR;gbkey=Gene;gene=oxyR;gene_biotype=protein_coding;locus_tag=LI478_RS24435 NZ_CP085478.1 Protein Homology CDS 5057352 5058269 . - 0 ID=cds-WP_002883015.1;Parent=gene-LI478_RS24435;Dbxref=Genbank:WP_002883015.1;Name=WP_002883015.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=oxyR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016831323.1;locus_tag=LI478_RS24435;product=DNA-binding transcriptional regulator OxyR;protein_id=WP_002883015.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5058529 5059902 . - . ID=gene-LI478_RS24440;Name=argH;gbkey=Gene;gene=argH;gene_biotype=protein_coding;locus_tag=LI478_RS24440 NZ_CP085478.1 Protein Homology CDS 5058529 5059902 . - 0 ID=cds-WP_004146283.1;Parent=gene-LI478_RS24440;Dbxref=Genbank:WP_004146283.1;Name=WP_004146283.1;Ontology_term=GO:0042450,GO:0004056;gbkey=CDS;gene=argH;go_function=argininosuccinate lyase activity|0004056||IEA;go_process=arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224402.1;locus_tag=LI478_RS24440;product=argininosuccinate lyase;protein_id=WP_004146283.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5060002 5060778 . - . ID=gene-LI478_RS24445;Name=argB;gbkey=Gene;gene=argB;gene_biotype=protein_coding;locus_tag=LI478_RS24445 NZ_CP085478.1 Protein Homology CDS 5060002 5060778 . - 0 ID=cds-WP_015959218.1;Parent=gene-LI478_RS24445;Dbxref=Genbank:WP_015959218.1;Name=WP_015959218.1;Ontology_term=GO:0006592,GO:0003991;gbkey=CDS;gene=argB;go_function=acetylglutamate kinase activity|0003991||IEA;go_process=ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418394.3;locus_tag=LI478_RS24445;product=acetylglutamate kinase;protein_id=WP_015959218.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5060785 5061789 . - . ID=gene-LI478_RS24450;Name=argC;gbkey=Gene;gene=argC;gene_biotype=protein_coding;locus_tag=LI478_RS24450 NZ_CP085478.1 Protein Homology CDS 5060785 5061789 . - 0 ID=cds-WP_004181637.1;Parent=gene-LI478_RS24450;Dbxref=Genbank:WP_004181637.1;Name=WP_004181637.1;Ontology_term=GO:0006592,GO:0003942;gbkey=CDS;gene=argC;go_function=N-acetyl-gamma-glutamyl-phosphate reductase activity|0003942||IEA;go_process=ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122770.1;locus_tag=LI478_RS24450;product=N-acetyl-gamma-glutamyl-phosphate reductase;protein_id=WP_004181637.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5061903 5063054 . + . ID=gene-LI478_RS24455;Name=argE;gbkey=Gene;gene=argE;gene_biotype=protein_coding;locus_tag=LI478_RS24455 NZ_CP085478.1 Protein Homology CDS 5061903 5063054 . + 0 ID=cds-WP_004177969.1;Parent=gene-LI478_RS24455;Dbxref=Genbank:WP_004177969.1;Name=WP_004177969.1;Ontology_term=GO:0006526,GO:0019213;gbkey=CDS;gene=argE;go_function=deacetylase activity|0019213||IEA;go_process=arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224399.1;locus_tag=LI478_RS24455;product=acetylornithine deacetylase;protein_id=WP_004177969.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5063313 5065964 . + . ID=gene-LI478_RS24460;Name=ppc;gbkey=Gene;gene=ppc;gene_biotype=protein_coding;locus_tag=LI478_RS24460 NZ_CP085478.1 Protein Homology CDS 5063313 5065964 . + 0 ID=cds-WP_004181636.1;Parent=gene-LI478_RS24460;Dbxref=Genbank:WP_004181636.1;Name=WP_004181636.1;Ontology_term=GO:0006099,GO:0015977,GO:0008964;gbkey=CDS;gene=ppc;go_function=phosphoenolpyruvate carboxylase activity|0008964||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,carbon fixation|0015977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004203687.1;locus_tag=LI478_RS24460;product=phosphoenolpyruvate carboxylase;protein_id=WP_004181636.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5066008 5066658 . - . ID=gene-LI478_RS24465;Name=zinT;gbkey=Gene;gene=zinT;gene_biotype=protein_coding;locus_tag=LI478_RS24465 NZ_CP085478.1 Protein Homology CDS 5066008 5066658 . - 0 ID=cds-WP_016530043.1;Parent=gene-LI478_RS24465;Dbxref=Genbank:WP_016530043.1;Name=WP_016530043.1;Ontology_term=GO:0008270;gbkey=CDS;gene=zinT;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224397.1;locus_tag=LI478_RS24465;product=metal-binding protein ZinT;protein_id=WP_016530043.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5066683 5067669 . + . ID=gene-LI478_RS24470;Name=LI478_RS24470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS24470 NZ_CP085478.1 Protein Homology CDS 5066683 5067669 . + 0 ID=cds-WP_074185302.1;Parent=gene-LI478_RS24470;Dbxref=Genbank:WP_074185302.1;Name=WP_074185302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224396.1;locus_tag=LI478_RS24470;product=AraC family transcriptional regulator;protein_id=WP_074185302.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5067875 5068537 . + . ID=gene-LI478_RS24475;Name=fsa;gbkey=Gene;gene=fsa;gene_biotype=protein_coding;locus_tag=LI478_RS24475 NZ_CP085478.1 Protein Homology CDS 5067875 5068537 . + 0 ID=cds-WP_004177977.1;Parent=gene-LI478_RS24475;Dbxref=Genbank:WP_004177977.1;Name=WP_004177977.1;Ontology_term=GO:0016832;gbkey=CDS;gene=fsa;go_function=aldehyde-lyase activity|0016832||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224395.1;locus_tag=LI478_RS24475;product=fructose-6-phosphate aldolase;protein_id=WP_004177977.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5068592 5069695 . + . ID=gene-LI478_RS24480;Name=LI478_RS24480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS24480 NZ_CP085478.1 Protein Homology CDS 5068592 5069695 . + 0 ID=cds-WP_004146274.1;Parent=gene-LI478_RS24480;Dbxref=Genbank:WP_004146274.1;Name=WP_004146274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224394.1;locus_tag=LI478_RS24480;product=glycerol dehydrogenase;protein_id=WP_004146274.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5069759 5070640 . - . ID=gene-LI478_RS24485;Name=LI478_RS24485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS24485 NZ_CP085478.1 Protein Homology CDS 5069759 5070640 . - 0 ID=cds-WP_004177983.1;Parent=gene-LI478_RS24485;Dbxref=Genbank:WP_004177983.1;Name=WP_004177983.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224393.1;locus_tag=LI478_RS24485;product=DMT family transporter;protein_id=WP_004177983.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5070784 5071671 . - . ID=gene-LI478_RS24490;Name=metF;gbkey=Gene;gene=metF;gene_biotype=protein_coding;locus_tag=LI478_RS24490 NZ_CP085478.1 Protein Homology CDS 5070784 5071671 . - 0 ID=cds-WP_002882952.1;Parent=gene-LI478_RS24490;Dbxref=Genbank:WP_002882952.1;Name=WP_002882952.1;Ontology_term=GO:0009086,GO:0004489;gbkey=CDS;gene=metF;go_function=methylenetetrahydrofolate reductase (NAD(P)H) activity|0004489||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224392.1;locus_tag=LI478_RS24490;product=methylenetetrahydrofolate reductase;protein_id=WP_002882952.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5071900 5072808 . - . ID=gene-LI478_RS24495;Name=LI478_RS24495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS24495 NZ_CP085478.1 Protein Homology CDS 5071900 5072808 . - 0 ID=cds-WP_004895139.1;Parent=gene-LI478_RS24495;Dbxref=Genbank:WP_004895139.1;Name=WP_004895139.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224391.1;locus_tag=LI478_RS24495;product=LysR family transcriptional regulator;protein_id=WP_004895139.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5072900 5073271 . + . ID=gene-LI478_RS24500;Name=LI478_RS24500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS24500 NZ_CP085478.1 Protein Homology CDS 5072900 5073271 . + 0 ID=cds-WP_002882947.1;Parent=gene-LI478_RS24500;Dbxref=Genbank:WP_002882947.1;Name=WP_002882947.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224390.1;locus_tag=LI478_RS24500;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_002882947.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5073309 5074865 . - . ID=gene-LI478_RS24505;Name=LI478_RS24505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS24505 NZ_CP085478.1 Protein Homology CDS 5073309 5074865 . - 0 ID=cds-WP_048290082.1;Parent=gene-LI478_RS24505;Dbxref=Genbank:WP_048290082.1;Name=WP_048290082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224389.1;locus_tag=LI478_RS24505;product=bifunctional UDP-sugar hydrolase/5'-nucleotidase;protein_id=WP_048290082.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5075004 5076140 . + . ID=gene-LI478_RS24510;Name=LI478_RS24510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS24510 NZ_CP085478.1 Protein Homology CDS 5075004 5076140 . + 0 ID=cds-WP_004177992.1;Parent=gene-LI478_RS24510;Dbxref=Genbank:WP_004177992.1;Name=WP_004177992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224388.1;locus_tag=LI478_RS24510;product=hypothetical protein;protein_id=WP_004177992.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5076115 5078547 . - . ID=gene-LI478_RS24515;Name=LI478_RS24515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS24515 NZ_CP085478.1 Protein Homology CDS 5076115 5078547 . - 0 ID=cds-WP_002882944.1;Parent=gene-LI478_RS24515;Dbxref=Genbank:WP_002882944.1;Name=WP_002882944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000110794.1;locus_tag=LI478_RS24515;product=bifunctional aspartate kinase/homoserine dehydrogenase II;protein_id=WP_002882944.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5078550 5079710 . - . ID=gene-LI478_RS24520;Name=metB;gbkey=Gene;gene=metB;gene_biotype=protein_coding;locus_tag=LI478_RS24520 NZ_CP085478.1 Protein Homology CDS 5078550 5079710 . - 0 ID=cds-WP_004150388.1;Parent=gene-LI478_RS24520;Dbxref=Genbank:WP_004150388.1;Name=WP_004150388.1;Ontology_term=GO:0019346,GO:0003824,GO:0030170;gbkey=CDS;gene=metB;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224386.1;locus_tag=LI478_RS24520;product=cystathionine gamma-synthase;protein_id=WP_004150388.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5079978 5080295 . + . ID=gene-LI478_RS24525;Name=metJ;gbkey=Gene;gene=metJ;gene_biotype=protein_coding;locus_tag=LI478_RS24525 NZ_CP085478.1 Protein Homology CDS 5079978 5080295 . + 0 ID=cds-WP_002882924.1;Parent=gene-LI478_RS24525;Dbxref=Genbank:WP_002882924.1;Name=WP_002882924.1;gbkey=CDS;gene=metJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015855437.1;locus_tag=LI478_RS24525;product=met regulon transcriptional regulator MetJ;protein_id=WP_002882924.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5080397 5080609 . - . ID=gene-LI478_RS24530;Name=rpmE;gbkey=Gene;gene=rpmE;gene_biotype=protein_coding;locus_tag=LI478_RS24530 NZ_CP085478.1 Protein Homology CDS 5080397 5080609 . - 0 ID=cds-WP_002882922.1;Parent=gene-LI478_RS24530;Dbxref=Genbank:WP_002882922.1;Name=WP_002882922.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmE;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312890.1;locus_tag=LI478_RS24530;product=50S ribosomal protein L31;protein_id=WP_002882922.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5080862 5083057 . + . ID=gene-LI478_RS24535;Name=priA;gbkey=Gene;gene=priA;gene_biotype=protein_coding;locus_tag=LI478_RS24535 NZ_CP085478.1 Protein Homology CDS 5080862 5083057 . + 0 ID=cds-WP_004177997.1;Parent=gene-LI478_RS24535;Dbxref=Genbank:WP_004177997.1;Name=WP_004177997.1;gbkey=CDS;gene=priA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224383.1;locus_tag=LI478_RS24535;product=primosomal protein N';protein_id=WP_004177997.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5083208 5084236 . + . ID=gene-LI478_RS24540;Name=cytR;gbkey=Gene;gene=cytR;gene_biotype=protein_coding;locus_tag=LI478_RS24540 NZ_CP085478.1 Protein Homology CDS 5083208 5084236 . + 0 ID=cds-WP_002882921.1;Parent=gene-LI478_RS24540;Dbxref=Genbank:WP_002882921.1;Name=WP_002882921.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=cytR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224381.1;locus_tag=LI478_RS24540;product=DNA-binding transcriptional regulator CytR;protein_id=WP_002882921.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5084330 5085298 . + . ID=gene-LI478_RS24545;Name=ftsN;gbkey=Gene;gene=ftsN;gene_biotype=protein_coding;locus_tag=LI478_RS24545 NZ_CP085478.1 Protein Homology CDS 5084330 5085298 . + 0 ID=cds-WP_002882919.1;Parent=gene-LI478_RS24545;Dbxref=Genbank:WP_002882919.1;Name=WP_002882919.1;Ontology_term=GO:0042834;gbkey=CDS;gene=ftsN;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002882919.1;locus_tag=LI478_RS24545;product=cell division protein FtsN;protein_id=WP_002882919.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5085390 5085920 . + . ID=gene-LI478_RS24550;Name=hslV;gbkey=Gene;gene=hslV;gene_biotype=protein_coding;locus_tag=LI478_RS24550 NZ_CP085478.1 Protein Homology CDS 5085390 5085920 . + 0 ID=cds-WP_002882918.1;Parent=gene-LI478_RS24550;Dbxref=Genbank:WP_002882918.1;Name=WP_002882918.1;Ontology_term=GO:0051603,GO:0004298;gbkey=CDS;gene=hslV;go_function=threonine-type endopeptidase activity|0004298||IEA;go_process=proteolysis involved in protein catabolic process|0051603||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224379.1;locus_tag=LI478_RS24550;product=ATP-dependent protease subunit HslV;protein_id=WP_002882918.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5085930 5087264 . + . ID=gene-LI478_RS24555;Name=hslU;gbkey=Gene;gene=hslU;gene_biotype=protein_coding;locus_tag=LI478_RS24555 NZ_CP085478.1 Protein Homology CDS 5085930 5087264 . + 0 ID=cds-WP_002882917.1;Parent=gene-LI478_RS24555;Dbxref=Genbank:WP_002882917.1;Name=WP_002882917.1;Ontology_term=GO:0006508,GO:0004176,GO:0005524;gbkey=CDS;gene=hslU;go_function=ATP-dependent peptidase activity|0004176||IEA,ATP binding|0005524||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019841241.1;locus_tag=LI478_RS24555;product=HslU--HslV peptidase ATPase subunit;protein_id=WP_002882917.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5087334 5088254 . + . ID=gene-LI478_RS24560;Name=menA;gbkey=Gene;gene=menA;gene_biotype=protein_coding;locus_tag=LI478_RS24560 NZ_CP085478.1 Protein Homology CDS 5087334 5088254 . + 0 ID=cds-WP_002882914.1;Parent=gene-LI478_RS24560;Dbxref=Genbank:WP_002882914.1;Name=WP_002882914.1;gbkey=CDS;gene=menA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224377.1;locus_tag=LI478_RS24560;product=1%2C4-dihydroxy-2-naphthoate polyprenyltransferase;protein_id=WP_002882914.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5088347 5088832 . + . ID=gene-LI478_RS24565;Name=rraA;gbkey=Gene;gene=rraA;gene_biotype=protein_coding;locus_tag=LI478_RS24565 NZ_CP085478.1 Protein Homology CDS 5088347 5088832 . + 0 ID=cds-WP_002882913.1;Parent=gene-LI478_RS24565;Dbxref=Genbank:WP_002882913.1;Name=WP_002882913.1;Ontology_term=GO:0051252,GO:0008428;gbkey=CDS;gene=rraA;go_function=ribonuclease inhibitor activity|0008428||IEA;go_process=regulation of RNA metabolic process|0051252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001392924.1;locus_tag=LI478_RS24565;product=ribonuclease E activity regulator RraA;protein_id=WP_002882913.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5088894 5089856 . - . ID=gene-LI478_RS24570;Name=pfkA;gbkey=Gene;gene=pfkA;gene_biotype=protein_coding;locus_tag=LI478_RS24570 NZ_CP085478.1 Protein Homology CDS 5088894 5089856 . - 0 ID=cds-WP_002882911.1;Parent=gene-LI478_RS24570;Dbxref=Genbank:WP_002882911.1;Name=WP_002882911.1;Ontology_term=GO:0006096;gbkey=CDS;gene=pfkA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014072359.1;locus_tag=LI478_RS24570;product=6-phosphofructokinase;protein_id=WP_002882911.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5090053 5090955 . - . ID=gene-LI478_RS24575;Name=fieF;gbkey=Gene;gene=fieF;gene_biotype=protein_coding;locus_tag=LI478_RS24575 NZ_CP085478.1 Protein Homology CDS 5090053 5090955 . - 0 ID=cds-WP_002882907.1;Parent=gene-LI478_RS24575;Dbxref=Genbank:WP_002882907.1;Name=WP_002882907.1;Note=FieF%2C a metal efflux transporter%2C is a member of the CDF (cation diffusion facilitator) family of transporters.;Ontology_term=GO:0006812,GO:0055085,GO:0008324,GO:0016020;gbkey=CDS;gene=fieF;go_component=membrane|0016020||IEA;go_function=cation transmembrane transporter activity|0008324||IEA;go_process=cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224374.1;locus_tag=LI478_RS24575;product=CDF family cation-efflux transporter FieF;protein_id=WP_002882907.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5091114 5091617 . - . ID=gene-LI478_RS24580;Name=cpxP;gbkey=Gene;gene=cpxP;gene_biotype=protein_coding;locus_tag=LI478_RS24580 NZ_CP085478.1 Protein Homology CDS 5091114 5091617 . - 0 ID=cds-WP_004178004.1;Parent=gene-LI478_RS24580;Dbxref=Genbank:WP_004178004.1;Name=WP_004178004.1;gbkey=CDS;gene=cpxP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224373.1;locus_tag=LI478_RS24580;product=cell-envelope stress modulator CpxP;protein_id=WP_004178004.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5091767 5092465 . + . ID=gene-LI478_RS24585;Name=cpxR;gbkey=Gene;gene=cpxR;gene_biotype=protein_coding;locus_tag=LI478_RS24585 NZ_CP085478.1 Protein Homology CDS 5091767 5092465 . + 0 ID=cds-WP_002882901.1;Parent=gene-LI478_RS24585;Dbxref=Genbank:WP_002882901.1;Name=WP_002882901.1;gbkey=CDS;gene=cpxR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001033718.1;locus_tag=LI478_RS24585;product=envelope stress response regulator transcription factor CpxR;protein_id=WP_002882901.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5092462 5093835 . + . ID=gene-LI478_RS24590;Name=cpxA;gbkey=Gene;gene=cpxA;gene_biotype=protein_coding;locus_tag=LI478_RS24590 NZ_CP085478.1 Protein Homology CDS 5092462 5093835 . + 0 ID=cds-WP_002882898.1;Parent=gene-LI478_RS24590;Dbxref=Genbank:WP_002882898.1;Name=WP_002882898.1;Ontology_term=GO:0007165,GO:0000155;gbkey=CDS;gene=cpxA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462939.1;locus_tag=LI478_RS24590;product=envelope stress sensor histidine kinase CpxA;protein_id=WP_002882898.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5093902 5094576 . - . ID=gene-LI478_RS24595;Name=yiiM;gbkey=Gene;gene=yiiM;gene_biotype=protein_coding;locus_tag=LI478_RS24595 NZ_CP085478.1 Protein Homology CDS 5093902 5094576 . - 0 ID=cds-WP_004181626.1;Parent=gene-LI478_RS24595;Dbxref=Genbank:WP_004181626.1;Name=WP_004181626.1;Ontology_term=GO:0003824,GO:0030151,GO:0030170;gbkey=CDS;gene=yiiM;go_function=catalytic activity|0003824||IEA,molybdenum ion binding|0030151||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224370.1;locus_tag=LI478_RS24595;product=6-hydroxyaminopurine reductase;protein_id=WP_004181626.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5094649 5095269 . - . ID=gene-LI478_RS24600;Name=sodA;gbkey=Gene;gene=sodA;gene_biotype=protein_coding;locus_tag=LI478_RS24600 NZ_CP085478.1 Protein Homology CDS 5094649 5095269 . - 0 ID=cds-WP_002882894.1;Parent=gene-LI478_RS24600;Dbxref=Genbank:WP_002882894.1;Name=WP_002882894.1;Ontology_term=GO:0006801,GO:0004784;gbkey=CDS;gene=sodA;go_function=superoxide dismutase activity|0004784||IEA;go_process=superoxide metabolic process|0006801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010345169.1;locus_tag=LI478_RS24600;product=superoxide dismutase [Mn];protein_id=WP_002882894.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5095559 5096593 . + . ID=gene-LI478_RS24605;Name=rhaT;gbkey=Gene;gene=rhaT;gene_biotype=protein_coding;locus_tag=LI478_RS24605 NZ_CP085478.1 Protein Homology CDS 5095559 5096593 . + 0 ID=cds-WP_020953285.1;Parent=gene-LI478_RS24605;Dbxref=Genbank:WP_020953285.1;Name=WP_020953285.1;Ontology_term=GO:0008645,GO:0015153;gbkey=CDS;gene=rhaT;go_function=rhamnose transmembrane transporter activity|0015153||IEA;go_process=hexose transmembrane transport|0008645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224368.1;locus_tag=LI478_RS24605;product=L-rhamnose/proton symporter RhaT;protein_id=WP_020953285.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5096626 5097471 . - . ID=gene-LI478_RS24610;Name=rhaR;gbkey=Gene;gene=rhaR;gene_biotype=protein_coding;locus_tag=LI478_RS24610 NZ_CP085478.1 Protein Homology CDS 5096626 5097471 . - 0 ID=cds-WP_002882891.1;Parent=gene-LI478_RS24610;Dbxref=Genbank:WP_002882891.1;Name=WP_002882891.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=rhaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224367.1;locus_tag=LI478_RS24610;product=HTH-type transcriptional activator RhaR;protein_id=WP_002882891.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5097545 5098381 . - . ID=gene-LI478_RS24615;Name=rhaS;gbkey=Gene;gene=rhaS;gene_biotype=protein_coding;locus_tag=LI478_RS24615 NZ_CP085478.1 Protein Homology CDS 5097545 5098381 . - 0 ID=cds-WP_004178008.1;Parent=gene-LI478_RS24615;Dbxref=Genbank:WP_004178008.1;Name=WP_004178008.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=rhaS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224366.1;locus_tag=LI478_RS24615;product=HTH-type transcriptional activator RhaS;protein_id=WP_004178008.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5098692 5100158 . + . ID=gene-LI478_RS24620;Name=rhaB;gbkey=Gene;gene=rhaB;gene_biotype=protein_coding;locus_tag=LI478_RS24620 NZ_CP085478.1 Protein Homology CDS 5098692 5100158 . + 0 ID=cds-WP_040182683.1;Parent=gene-LI478_RS24620;Dbxref=Genbank:WP_040182683.1;Name=WP_040182683.1;Ontology_term=GO:0005975,GO:0019301,GO:0008993;gbkey=CDS;gene=rhaB;go_function=rhamnulokinase activity|0008993||IEA;go_process=carbohydrate metabolic process|0005975||IEA,rhamnose catabolic process|0019301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224365.1;locus_tag=LI478_RS24620;product=rhamnulokinase;protein_id=WP_040182683.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5100155 5101414 . + . ID=gene-LI478_RS24625;Name=rhaA;gbkey=Gene;gene=rhaA;gene_biotype=protein_coding;locus_tag=LI478_RS24625 NZ_CP085478.1 Protein Homology CDS 5100155 5101414 . + 0 ID=cds-WP_032433728.1;Parent=gene-LI478_RS24625;Dbxref=Genbank:WP_032433728.1;Name=WP_032433728.1;Ontology_term=GO:0019301,GO:0008740;gbkey=CDS;gene=rhaA;go_function=L-rhamnose isomerase activity|0008740||IEA;go_process=rhamnose catabolic process|0019301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224364.1;locus_tag=LI478_RS24625;product=L-rhamnose isomerase;protein_id=WP_032433728.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5101564 5102394 . + . ID=gene-LI478_RS24630;Name=rhaD;gbkey=Gene;gene=rhaD;gene_biotype=protein_coding;locus_tag=LI478_RS24630 NZ_CP085478.1 Protein Homology CDS 5101564 5102394 . + 0 ID=cds-WP_002882882.1;Parent=gene-LI478_RS24630;Dbxref=Genbank:WP_002882882.1;Name=WP_002882882.1;gbkey=CDS;gene=rhaD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224363.1;locus_tag=LI478_RS24630;product=rhamnulose-1-phosphate aldolase;protein_id=WP_002882882.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5102476 5103462 . + . ID=gene-LI478_RS24635;Name=rhaS;gbkey=Gene;gene=rhaS;gene_biotype=protein_coding;locus_tag=LI478_RS24635 NZ_CP085478.1 Protein Homology CDS 5102476 5103462 . + 0 ID=cds-WP_002882880.1;Parent=gene-LI478_RS24635;Dbxref=Genbank:WP_002882880.1;Name=WP_002882880.1;Ontology_term=GO:0015762,GO:0015153,GO:0033296,GO:0009897,GO:0030288,GO:0055052;gbkey=CDS;gene=rhaS;go_component=external side of plasma membrane|0009897||IEA,outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=rhamnose transmembrane transporter activity|0015153||IEA,rhamnose binding|0033296||IEA;go_process=rhamnose transmembrane transport|0015762||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224362.1;locus_tag=LI478_RS24635;product=rhamnose ABC transporter substrate-binding protein;protein_id=WP_002882880.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5103608 5105119 . + . ID=gene-LI478_RS24640;Name=LI478_RS24640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS24640 NZ_CP085478.1 Protein Homology CDS 5103608 5105119 . + 0 ID=cds-WP_004151860.1;Parent=gene-LI478_RS24640;Dbxref=Genbank:WP_004151860.1;Name=WP_004151860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224361.1;locus_tag=LI478_RS24640;product=sugar ABC transporter ATP-binding protein;protein_id=WP_004151860.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5105116 5106123 . + . ID=gene-LI478_RS24645;Name=LI478_RS24645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS24645 NZ_CP085478.1 Protein Homology CDS 5105116 5106123 . + 0 ID=cds-WP_004220853.1;Parent=gene-LI478_RS24645;Dbxref=Genbank:WP_004220853.1;Name=WP_004220853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224360.1;locus_tag=LI478_RS24645;product=ABC transporter permease;protein_id=WP_004220853.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5106120 5107124 . + . ID=gene-LI478_RS24650;Name=LI478_RS24650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS24650 NZ_CP085478.1 Protein Homology CDS 5106120 5107124 . + 0 ID=cds-WP_002882873.1;Parent=gene-LI478_RS24650;Dbxref=Genbank:WP_002882873.1;Name=WP_002882873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224359.1;locus_tag=LI478_RS24650;product=ABC transporter permease;protein_id=WP_002882873.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5107214 5108362 . + . ID=gene-LI478_RS24655;Name=fucO;gbkey=Gene;gene=fucO;gene_biotype=protein_coding;locus_tag=LI478_RS24655 NZ_CP085478.1 Protein Homology CDS 5107214 5108362 . + 0 ID=cds-WP_064153641.1;Parent=gene-LI478_RS24655;Dbxref=Genbank:WP_064153641.1;Name=WP_064153641.1;Ontology_term=GO:0008912;gbkey=CDS;gene=fucO;go_function=lactaldehyde reductase activity|0008912||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224358.1;locus_tag=LI478_RS24655;product=lactaldehyde reductase;protein_id=WP_064153641.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5108359 5108673 . + . ID=gene-LI478_RS24660;Name=rhaM;gbkey=Gene;gene=rhaM;gene_biotype=protein_coding;locus_tag=LI478_RS24660 NZ_CP085478.1 Protein Homology CDS 5108359 5108673 . + 0 ID=cds-WP_002882870.1;Parent=gene-LI478_RS24660;Dbxref=Genbank:WP_002882870.1;Name=WP_002882870.1;Ontology_term=GO:0019301,GO:0016857;gbkey=CDS;gene=rhaM;go_function=racemase and epimerase activity%2C acting on carbohydrates and derivatives|0016857||IEA;go_process=rhamnose catabolic process|0019301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224357.1;locus_tag=LI478_RS24660;product=L-rhamnose mutarotase;protein_id=WP_002882870.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5108711 5109976 . - . ID=gene-LI478_RS24665;Name=LI478_RS24665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS24665 NZ_CP085478.1 Protein Homology CDS 5108711 5109976 . - 0 ID=cds-WP_002882868.1;Parent=gene-LI478_RS24665;Dbxref=Genbank:WP_002882868.1;Name=WP_002882868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224356.1;locus_tag=LI478_RS24665;product=MFS transporter;protein_id=WP_002882868.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5110018 5112141 . - . ID=gene-LI478_RS24670;Name=LI478_RS24670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS24670 NZ_CP085478.1 Protein Homology CDS 5110018 5112141 . - 0 ID=cds-WP_064153642.1;Parent=gene-LI478_RS24670;Dbxref=Genbank:WP_064153642.1;Name=WP_064153642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224355.1;locus_tag=LI478_RS24670;product=alpha-galactosidase;protein_id=WP_064153642.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5112257 5113252 . - . ID=gene-LI478_RS24675;Name=LI478_RS24675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS24675 NZ_CP085478.1 Protein Homology CDS 5112257 5113252 . - 0 ID=cds-WP_004146243.1;Parent=gene-LI478_RS24675;Dbxref=Genbank:WP_004146243.1;Name=WP_004146243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224354.1;locus_tag=LI478_RS24675;product=substrate-binding domain-containing protein;protein_id=WP_004146243.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5113340 5113888 . - . ID=gene-LI478_RS24680;Name=LI478_RS24680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS24680 NZ_CP085478.1 Protein Homology CDS 5113340 5113888 . - 0 ID=cds-WP_002882865.1;Parent=gene-LI478_RS24680;Dbxref=Genbank:WP_002882865.1;Name=WP_002882865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004855902.1;locus_tag=LI478_RS24680;product=helix-turn-helix domain-containing protein;protein_id=WP_002882865.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5113988 5114647 . + . ID=gene-LI478_RS24685;Name=LI478_RS24685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS24685 NZ_CP085478.1 Protein Homology CDS 5113988 5114647 . + 0 ID=cds-WP_064153643.1;Parent=gene-LI478_RS24685;Dbxref=Genbank:WP_064153643.1;Name=WP_064153643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016831326.1;locus_tag=LI478_RS24685;product=AzlC family ABC transporter permease;protein_id=WP_064153643.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5114647 5114970 . + . ID=gene-LI478_RS24690;Name=LI478_RS24690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS24690 NZ_CP085478.1 Protein Homology CDS 5114647 5114970 . + 0 ID=cds-WP_002882863.1;Parent=gene-LI478_RS24690;Dbxref=Genbank:WP_002882863.1;Name=WP_002882863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224351.1;locus_tag=LI478_RS24690;product=AzlD domain-containing protein;protein_id=WP_002882863.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5114967 5115560 . - . ID=gene-LI478_RS24695;Name=LI478_RS24695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS24695 NZ_CP085478.1 Protein Homology CDS 5114967 5115560 . - 0 ID=cds-WP_002882862.1;Parent=gene-LI478_RS24695;Dbxref=Genbank:WP_002882862.1;Name=WP_002882862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224350.1;locus_tag=LI478_RS24695;product=ATPase AAA;protein_id=WP_002882862.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5115557 5115994 . - . ID=gene-LI478_RS24700;Name=LI478_RS24700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS24700 NZ_CP085478.1 Protein Homology CDS 5115557 5115994 . - 0 ID=cds-WP_002882861.1;Parent=gene-LI478_RS24700;Dbxref=Genbank:WP_002882861.1;Name=WP_002882861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224349.1;locus_tag=LI478_RS24700;product=PTS sugar transporter subunit IIA;protein_id=WP_002882861.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5116004 5116273 . - . ID=gene-LI478_RS24705;Name=LI478_RS24705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS24705 NZ_CP085478.1 Protein Homology CDS 5116004 5116273 . - 0 ID=cds-WP_002882858.1;Parent=gene-LI478_RS24705;Dbxref=Genbank:WP_002882858.1;Name=WP_002882858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224348.1;locus_tag=LI478_RS24705;product=hypothetical protein;protein_id=WP_002882858.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5116332 5117174 . - . ID=gene-LI478_RS24710;Name=LI478_RS24710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS24710 NZ_CP085478.1 Protein Homology CDS 5116332 5117174 . - 0 ID=cds-WP_102007293.1;Parent=gene-LI478_RS24710;Dbxref=Genbank:WP_102007293.1;Name=WP_102007293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224347.1;locus_tag=LI478_RS24710;product=class II fructose-bisphosphate aldolase;protein_id=WP_102007293.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5117161 5118528 . - . ID=gene-LI478_RS24715;Name=LI478_RS24715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS24715 NZ_CP085478.1 Protein Homology CDS 5117161 5118528 . - 0 ID=cds-WP_064153644.1;Parent=gene-LI478_RS24715;Dbxref=Genbank:WP_064153644.1;Name=WP_064153644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224346.1;locus_tag=LI478_RS24715;product=PTS sugar transporter subunit IIC;protein_id=WP_064153644.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5118521 5118835 . - . ID=gene-LI478_RS24720;Name=LI478_RS24720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS24720 NZ_CP085478.1 Protein Homology CDS 5118521 5118835 . - 0 ID=cds-WP_004151864.1;Parent=gene-LI478_RS24720;Dbxref=Genbank:WP_004151864.1;Name=WP_004151864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224345.1;locus_tag=LI478_RS24720;product=PTS sugar transporter subunit IIB;protein_id=WP_004151864.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5118847 5119827 . - . ID=gene-LI478_RS24725;Name=LI478_RS24725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS24725 NZ_CP085478.1 Protein Homology CDS 5118847 5119827 . - 0 ID=cds-WP_002882831.1;Parent=gene-LI478_RS24725;Dbxref=Genbank:WP_002882831.1;Name=WP_002882831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224344.1;locus_tag=LI478_RS24725;product=6-phosphofructokinase;protein_id=WP_002882831.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5120230 5120442 . - . ID=gene-LI478_RS24730;Name=LI478_RS24730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS24730 NZ_CP085478.1 Protein Homology CDS 5120230 5120442 . - 0 ID=cds-WP_002882830.1;Parent=gene-LI478_RS24730;Dbxref=Genbank:WP_002882830.1;Name=WP_002882830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224343.1;locus_tag=LI478_RS24730;product=DUF1471 domain-containing protein;protein_id=WP_002882830.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5120571 5121407 . - . ID=gene-LI478_RS24735;Name=fdhD;gbkey=Gene;gene=fdhD;gene_biotype=protein_coding;locus_tag=LI478_RS24735 NZ_CP085478.1 Protein Homology CDS 5120571 5121407 . - 0 ID=cds-WP_002882828.1;Parent=gene-LI478_RS24735;Dbxref=Genbank:WP_002882828.1;Name=WP_002882828.1;Ontology_term=GO:0009061,GO:0015942,GO:0008863,GO:0009326;gbkey=CDS;gene=fdhD;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA;go_process=anaerobic respiration|0009061||IEA,formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224342.1;locus_tag=LI478_RS24735;product=formate dehydrogenase accessory sulfurtransferase FdhD;protein_id=WP_002882828.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5121564 5124614 . + . ID=gene-LI478_RS24740;Name=fdnG;gbkey=Gene;gene=fdnG;gene_biotype=protein_coding;locus_tag=LI478_RS24740 NZ_CP085478.1 Protein Homology CDS 5121564 5124614 . + 0 ID=cds-WP_085921749.1;Parent=gene-LI478_RS24740;Dbxref=Genbank:WP_085921749.1;Name=WP_085921749.1;Ontology_term=GO:0015942,GO:0009326;gbkey=CDS;gene=fdnG;go_component=formate dehydrogenase complex|0009326||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462917.1;locus_tag=LI478_RS24740;product=formate dehydrogenase-N subunit alpha;protein_id=WP_085921749.1;transl_except=(pos:5122149..5122151%2Caa:Sec);transl_table=11 NZ_CP085478.1 RefSeq gene 5124627 5125529 . + . ID=gene-LI478_RS24745;Name=fdxH;gbkey=Gene;gene=fdxH;gene_biotype=protein_coding;locus_tag=LI478_RS24745 NZ_CP085478.1 Protein Homology CDS 5124627 5125529 . + 0 ID=cds-WP_002882822.1;Parent=gene-LI478_RS24745;Dbxref=Genbank:WP_002882822.1;Name=WP_002882822.1;Ontology_term=GO:0045333,GO:0008863;gbkey=CDS;gene=fdxH;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA;go_process=cellular respiration|0045333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224339.1;locus_tag=LI478_RS24745;product=formate dehydrogenase subunit beta;protein_id=WP_002882822.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5125526 5126161 . + . ID=gene-LI478_RS24750;Name=fdoI;gbkey=Gene;gene=fdoI;gene_biotype=protein_coding;locus_tag=LI478_RS24750 NZ_CP085478.1 Protein Homology CDS 5125526 5126161 . + 0 ID=cds-WP_002882818.1;Parent=gene-LI478_RS24750;Dbxref=Genbank:WP_002882818.1;Name=WP_002882818.1;gbkey=CDS;gene=fdoI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224338.1;locus_tag=LI478_RS24750;product=formate dehydrogenase cytochrome b556 subunit;protein_id=WP_002882818.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5126158 5127087 . + . ID=gene-LI478_RS24755;Name=fdhE;gbkey=Gene;gene=fdhE;gene_biotype=protein_coding;locus_tag=LI478_RS24755 NZ_CP085478.1 Protein Homology CDS 5126158 5127087 . + 0 ID=cds-WP_004150358.1;Parent=gene-LI478_RS24755;Dbxref=Genbank:WP_004150358.1;Name=WP_004150358.1;gbkey=CDS;gene=fdhE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121819.1;locus_tag=LI478_RS24755;product=formate dehydrogenase accessory protein FdhE;protein_id=WP_004150358.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5127261 5127644 . - . ID=gene-LI478_RS24760;Name=LI478_RS24760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS24760 NZ_CP085478.1 Protein Homology CDS 5127261 5127644 . - 0 ID=cds-WP_002882817.1;Parent=gene-LI478_RS24760;Dbxref=Genbank:WP_002882817.1;Name=WP_002882817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224336.1;locus_tag=LI478_RS24760;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_002882817.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5127644 5127886 . - . ID=gene-LI478_RS24765;Name=LI478_RS24765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS24765 NZ_CP085478.1 Protein Homology CDS 5127644 5127886 . - 0 ID=cds-WP_004150355.1;Parent=gene-LI478_RS24765;Dbxref=Genbank:WP_004150355.1;Name=WP_004150355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224335.1;locus_tag=LI478_RS24765;product=ribbon-helix-helix domain-containing protein;protein_id=WP_004150355.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5128091 5129008 . + . ID=gene-LI478_RS24770;Name=LI478_RS24770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS24770 NZ_CP085478.1 Protein Homology CDS 5128091 5129008 . + 0 ID=cds-WP_012737090.1;Parent=gene-LI478_RS24770;Dbxref=Genbank:WP_012737090.1;Name=WP_012737090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224334.1;locus_tag=LI478_RS24770;product=alpha/beta hydrolase;protein_id=WP_012737090.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5129022 5129963 . - . ID=gene-LI478_RS24775;Name=fabY;gbkey=Gene;gene=fabY;gene_biotype=protein_coding;gene_synonym=yiiD;locus_tag=LI478_RS24775 NZ_CP085478.1 Protein Homology CDS 5129022 5129963 . - 0 ID=cds-WP_012543287.1;Parent=gene-LI478_RS24775;Dbxref=Genbank:WP_012543287.1;Name=WP_012543287.1;gbkey=CDS;gene=fabY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001666856.1;locus_tag=LI478_RS24775;product=fatty acid biosynthesis protein FabY;protein_id=WP_012543287.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5130008 5130445 . - . ID=gene-LI478_RS24780;Name=dtd;gbkey=Gene;gene=dtd;gene_biotype=protein_coding;locus_tag=LI478_RS24780 NZ_CP085478.1 Protein Homology CDS 5130008 5130445 . - 0 ID=cds-WP_002882809.1;Parent=gene-LI478_RS24780;Dbxref=Genbank:WP_002882809.1;Name=WP_002882809.1;Ontology_term=GO:0008152,GO:0004045;gbkey=CDS;gene=dtd;go_function=aminoacyl-tRNA hydrolase activity|0004045||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000560980.1;locus_tag=LI478_RS24780;product=D-aminoacyl-tRNA deacylase;protein_id=WP_002882809.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5130442 5131302 . - . ID=gene-LI478_RS24785;Name=LI478_RS24785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS24785 NZ_CP085478.1 Protein Homology CDS 5130442 5131302 . - 0 ID=cds-WP_004146232.1;Parent=gene-LI478_RS24785;Dbxref=Genbank:WP_004146232.1;Name=WP_004146232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224331.1;locus_tag=LI478_RS24785;product=virulence factor BrkB family protein;protein_id=WP_004146232.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5131296 5131895 . - . ID=gene-LI478_RS24790;Name=yihX;gbkey=Gene;gene=yihX;gene_biotype=protein_coding;locus_tag=LI478_RS24790 NZ_CP085478.1 Protein Homology CDS 5131296 5131895 . - 0 ID=cds-WP_004151865.1;Parent=gene-LI478_RS24790;Dbxref=Genbank:WP_004151865.1;Name=WP_004151865.1;gbkey=CDS;gene=yihX;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224330.1;locus_tag=LI478_RS24790;product=glucose-1-phosphatase;protein_id=WP_004151865.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5132030 5133853 . - . ID=gene-LI478_RS24795;Name=typA;gbkey=Gene;gene=typA;gene_biotype=protein_coding;locus_tag=LI478_RS24795 NZ_CP085478.1 Protein Homology CDS 5132030 5133853 . - 0 ID=cds-WP_002882755.1;Parent=gene-LI478_RS24795;Dbxref=Genbank:WP_002882755.1;Name=WP_002882755.1;gbkey=CDS;gene=typA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224329.1;locus_tag=LI478_RS24795;product=ribosome-dependent GTPase TypA;protein_id=WP_002882755.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5134232 5135641 . + . ID=gene-LI478_RS24800;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=LI478_RS24800 NZ_CP085478.1 Protein Homology CDS 5134232 5135641 . + 0 ID=cds-WP_002882753.1;Parent=gene-LI478_RS24800;Dbxref=Genbank:WP_002882753.1;Name=WP_002882753.1;Ontology_term=GO:0006542,GO:0006807,GO:0004356;gbkey=CDS;gene=glnA;go_function=glutamate-ammonia ligase activity|0004356||IEA;go_process=glutamine biosynthetic process|0006542||IEA,nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233234.1;locus_tag=LI478_RS24800;product=glutamate--ammonia ligase;protein_id=WP_002882753.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5135830 5136879 . + . ID=gene-LI478_RS24805;Name=glnL;gbkey=Gene;gene=glnL;gene_biotype=protein_coding;locus_tag=LI478_RS24805 NZ_CP085478.1 Protein Homology CDS 5135830 5136879 . + 0 ID=cds-WP_004146229.1;Parent=gene-LI478_RS24805;Dbxref=Genbank:WP_004146229.1;Name=WP_004146229.1;Ontology_term=GO:0006355,GO:0007165,GO:0016310,GO:0000155;gbkey=CDS;gene=glnL;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224326.1;locus_tag=LI478_RS24805;product=nitrogen regulation protein NR(II);protein_id=WP_004146229.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5136888 5138297 . + . ID=gene-LI478_RS24810;Name=glnG;gbkey=Gene;gene=glnG;gene_biotype=protein_coding;locus_tag=LI478_RS24810 NZ_CP085478.1 Protein Homology CDS 5136888 5138297 . + 0 ID=cds-WP_002882749.1;Parent=gene-LI478_RS24810;Dbxref=Genbank:WP_002882749.1;Name=WP_002882749.1;Ontology_term=GO:0006355,GO:0043565;gbkey=CDS;gene=glnG;go_function=sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133942.1;locus_tag=LI478_RS24810;product=nitrogen regulation protein NR(I);protein_id=WP_002882749.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5138408 5138518 . + . ID=gene-LI478_RS24815;Name=LI478_RS24815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS24815 NZ_CP085478.1 Protein Homology CDS 5138408 5138518 . + 0 ID=cds-WP_004152951.1;Parent=gene-LI478_RS24815;Dbxref=Genbank:WP_004152951.1;Name=WP_004152951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001578131.1;locus_tag=LI478_RS24815;product=YshB family small membrane protein;protein_id=WP_004152951.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5138554 5139927 . - . ID=gene-LI478_RS24820;Name=hemN;gbkey=Gene;gene=hemN;gene_biotype=protein_coding;locus_tag=LI478_RS24820 NZ_CP085478.1 Protein Homology CDS 5138554 5139927 . - 0 ID=cds-WP_032415938.1;Parent=gene-LI478_RS24820;Dbxref=Genbank:WP_032415938.1;Name=WP_032415938.1;Ontology_term=GO:0006779,GO:0051989;gbkey=CDS;gene=hemN;go_function=coproporphyrinogen dehydrogenase activity|0051989||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224324.1;locus_tag=LI478_RS24820;product=oxygen-independent coproporphyrinogen III oxidase;protein_id=WP_032415938.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5140116 5140622 . - . ID=gene-LI478_RS24825;Name=yihI;gbkey=Gene;gene=yihI;gene_biotype=protein_coding;locus_tag=LI478_RS24825 NZ_CP085478.1 Protein Homology CDS 5140116 5140622 . - 0 ID=cds-WP_002882743.1;Parent=gene-LI478_RS24825;Dbxref=Genbank:WP_002882743.1;Name=WP_002882743.1;gbkey=CDS;gene=yihI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224323.1;locus_tag=LI478_RS24825;product=Der GTPase-activating protein YihI;protein_id=WP_002882743.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5141206 5141838 . + . ID=gene-LI478_RS24830;Name=yihA;gbkey=Gene;gene=yihA;gene_biotype=protein_coding;locus_tag=LI478_RS24830 NZ_CP085478.1 Protein Homology CDS 5141206 5141838 . + 0 ID=cds-WP_002882734.1;Parent=gene-LI478_RS24830;Dbxref=Genbank:WP_002882734.1;Name=WP_002882734.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=yihA;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224322.1;locus_tag=LI478_RS24830;product=ribosome biogenesis GTP-binding protein YihA/YsxC;protein_id=WP_002882734.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5142186 5144978 . - . ID=gene-LI478_RS24835;Name=polA;gbkey=Gene;gene=polA;gene_biotype=protein_coding;locus_tag=LI478_RS24835 NZ_CP085478.1 Protein Homology CDS 5142186 5144978 . - 0 ID=cds-WP_004187174.1;Parent=gene-LI478_RS24835;Dbxref=Genbank:WP_004187174.1;Name=WP_004187174.1;Ontology_term=GO:0006261,GO:0003676,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;gene=polA;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA-templated DNA replication|0006261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418300.1;locus_tag=LI478_RS24835;product=DNA polymerase I;protein_id=WP_004187174.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5145375 5146274 . + . ID=gene-LI478_RS24840;Name=LI478_RS24840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS24840 NZ_CP085478.1 Protein Homology CDS 5145375 5146274 . + 0 ID=cds-WP_048979512.1;Parent=gene-LI478_RS24840;Dbxref=Genbank:WP_048979512.1;Name=WP_048979512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224320.1;locus_tag=LI478_RS24840;product=acyltransferase;protein_id=WP_048979512.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5146323 5146946 . - . ID=gene-LI478_RS24845;Name=dsbA;gbkey=Gene;gene=dsbA;gene_biotype=protein_coding;locus_tag=LI478_RS24845 NZ_CP085478.1 Protein Homology CDS 5146323 5146946 . - 0 ID=cds-WP_004146224.1;Parent=gene-LI478_RS24845;Dbxref=Genbank:WP_004146224.1;Name=WP_004146224.1;Ontology_term=GO:0016491;gbkey=CDS;gene=dsbA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224319.1;locus_tag=LI478_RS24845;product=thiol:disulfide interchange protein DsbA;protein_id=WP_004146224.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5146974 5147960 . - . ID=gene-LI478_RS24850;Name=LI478_RS24850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS24850 NZ_CP085478.1 Protein Homology CDS 5146974 5147960 . - 0 ID=cds-WP_048979511.1;Parent=gene-LI478_RS24850;Dbxref=Genbank:WP_048979511.1;Name=WP_048979511.1;Ontology_term=GO:0006468,GO:0004674;gbkey=CDS;go_function=protein serine/threonine kinase activity|0004674||IEA;go_process=protein phosphorylation|0006468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224318.1;locus_tag=LI478_RS24850;product=serine/threonine protein kinase;protein_id=WP_048979511.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5148036 5148305 . - . ID=gene-LI478_RS24855;Name=LI478_RS24855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS24855 NZ_CP085478.1 Protein Homology CDS 5148036 5148305 . - 0 ID=cds-WP_002882612.1;Parent=gene-LI478_RS24855;Dbxref=Genbank:WP_002882612.1;Name=WP_002882612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966571.1;locus_tag=LI478_RS24855;product=YihD family protein;protein_id=WP_002882612.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5148377 5148958 . + . ID=gene-LI478_RS24860;Name=mobA;gbkey=Gene;gene=mobA;gene_biotype=protein_coding;locus_tag=LI478_RS24860 NZ_CP085478.1 Protein Homology CDS 5148377 5148958 . + 0 ID=cds-WP_016947121.1;Parent=gene-LI478_RS24860;Dbxref=Genbank:WP_016947121.1;Name=WP_016947121.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=mobA;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224316.1;locus_tag=LI478_RS24860;product=molybdenum cofactor guanylyltransferase MobA;protein_id=WP_016947121.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5148955 5149461 . + . ID=gene-LI478_RS24865;Name=mobB;gbkey=Gene;gene=mobB;gene_biotype=protein_coding;locus_tag=LI478_RS24865 NZ_CP085478.1 Protein Homology CDS 5148955 5149461 . + 0 ID=cds-WP_002882596.1;Parent=gene-LI478_RS24865;Dbxref=Genbank:WP_002882596.1;Name=WP_002882596.1;Ontology_term=GO:0006777,GO:0005525;gbkey=CDS;gene=mobB;go_function=GTP binding|0005525||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224315.1;locus_tag=LI478_RS24865;product=molybdopterin-guanine dinucleotide biosynthesis protein MobB;protein_id=WP_002882596.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5149828 5149943 . - . ID=gene-LI478_RS24870;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=LI478_RS24870 NZ_CP085478.1 cmsearch rRNA 5149828 5149943 . - . ID=rna-LI478_RS24870;Parent=gene-LI478_RS24870;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LI478_RS24870;product=5S ribosomal RNA NZ_CP085478.1 cmsearch exon 5149828 5149943 . - . ID=exon-LI478_RS24870-1;Parent=rna-LI478_RS24870;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LI478_RS24870;product=5S ribosomal RNA NZ_CP085478.1 RefSeq gene 5150041 5152942 . - . ID=gene-LI478_RS24875;Name=LI478_RS24875;gbkey=Gene;gene_biotype=rRNA;locus_tag=LI478_RS24875 NZ_CP085478.1 cmsearch rRNA 5150041 5152942 . - . ID=rna-LI478_RS24875;Parent=gene-LI478_RS24875;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LI478_RS24875;product=23S ribosomal RNA NZ_CP085478.1 cmsearch exon 5150041 5152942 . - . ID=exon-LI478_RS24875-1;Parent=rna-LI478_RS24875;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LI478_RS24875;product=23S ribosomal RNA NZ_CP085478.1 RefSeq gene 5153125 5153200 . - . ID=gene-LI478_RS24880;Name=LI478_RS24880;gbkey=Gene;gene_biotype=tRNA;locus_tag=LI478_RS24880 NZ_CP085478.1 tRNAscan-SE tRNA 5153125 5153200 . - . ID=rna-LI478_RS24880;Parent=gene-LI478_RS24880;anticodon=(pos:complement(5153164..5153166));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS24880;product=tRNA-Glu NZ_CP085478.1 tRNAscan-SE exon 5153125 5153200 . - . ID=exon-LI478_RS24880-1;Parent=rna-LI478_RS24880;anticodon=(pos:complement(5153164..5153166));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS24880;product=tRNA-Glu NZ_CP085478.1 RefSeq gene 5153286 5154825 . - . ID=gene-LI478_RS24885;Name=LI478_RS24885;gbkey=Gene;gene_biotype=rRNA;locus_tag=LI478_RS24885 NZ_CP085478.1 cmsearch rRNA 5153286 5154825 . - . ID=rna-LI478_RS24885;Parent=gene-LI478_RS24885;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LI478_RS24885;product=16S ribosomal RNA NZ_CP085478.1 cmsearch exon 5153286 5154825 . - . ID=exon-LI478_RS24885-1;Parent=rna-LI478_RS24885;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LI478_RS24885;product=16S ribosomal RNA NZ_CP085478.1 RefSeq gene 5155302 5156003 . + . ID=gene-LI478_RS24890;Name=LI478_RS24890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS24890 NZ_CP085478.1 Protein Homology CDS 5155302 5156003 . + 0 ID=cds-WP_002882540.1;Parent=gene-LI478_RS24890;Dbxref=Genbank:WP_002882540.1;Name=WP_002882540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224314.1;locus_tag=LI478_RS24890;product=FadR/GntR family transcriptional regulator;protein_id=WP_002882540.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5156016 5157413 . + . ID=gene-LI478_RS24895;Name=mdtD;gbkey=Gene;gene=mdtD;gene_biotype=protein_coding;locus_tag=LI478_RS24895 NZ_CP085478.1 Protein Homology CDS 5156016 5157413 . + 0 ID=cds-WP_064153633.1;Parent=gene-LI478_RS24895;Dbxref=Genbank:WP_064153633.1;Name=WP_064153633.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mdtD;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224313.1;locus_tag=LI478_RS24895;product=multidrug transporter subunit MdtD;protein_id=WP_064153633.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5157410 5158402 . - . ID=gene-LI478_RS24900;Name=rbsR;gbkey=Gene;gene=rbsR;gene_biotype=protein_coding;locus_tag=LI478_RS24900 NZ_CP085478.1 Protein Homology CDS 5157410 5158402 . - 0 ID=cds-WP_016831327.1;Parent=gene-LI478_RS24900;Dbxref=Genbank:WP_016831327.1;Name=WP_016831327.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=rbsR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312722.1;locus_tag=LI478_RS24900;product=ribose operon transcriptional repressor RbsR;protein_id=WP_016831327.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5158406 5159338 . - . ID=gene-LI478_RS24905;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=protein_coding;locus_tag=LI478_RS24905 NZ_CP085478.1 Protein Homology CDS 5158406 5159338 . - 0 ID=cds-WP_004173836.1;Parent=gene-LI478_RS24905;Dbxref=Genbank:WP_004173836.1;Name=WP_004173836.1;Ontology_term=GO:0006014,GO:0004747;gbkey=CDS;gene=rbsK;go_function=ribokinase activity|0004747||IEA;go_process=D-ribose metabolic process|0006014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224311.1;locus_tag=LI478_RS24905;product=ribokinase;protein_id=WP_004173836.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5159439 5160329 . - . ID=gene-LI478_RS24910;Name=rbsB;gbkey=Gene;gene=rbsB;gene_biotype=protein_coding;locus_tag=LI478_RS24910 NZ_CP085478.1 Protein Homology CDS 5159439 5160329 . - 0 ID=cds-WP_002882536.1;Parent=gene-LI478_RS24910;Dbxref=Genbank:WP_002882536.1;Name=WP_002882536.1;gbkey=CDS;gene=rbsB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224310.1;locus_tag=LI478_RS24910;product=ribose ABC transporter substrate-binding protein RbsB;protein_id=WP_002882536.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5160357 5161322 . - . ID=gene-LI478_RS24915;Name=rbsC;gbkey=Gene;gene=rbsC;gene_biotype=protein_coding;locus_tag=LI478_RS24915 NZ_CP085478.1 Protein Homology CDS 5160357 5161322 . - 0 ID=cds-WP_064153632.1;Parent=gene-LI478_RS24915;Dbxref=Genbank:WP_064153632.1;Name=WP_064153632.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=rbsC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002882531.1;locus_tag=LI478_RS24915;product=ribose ABC transporter permease;protein_id=WP_064153632.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5161328 5162833 . - . ID=gene-LI478_RS24920;Name=rbsA;gbkey=Gene;gene=rbsA;gene_biotype=protein_coding;locus_tag=LI478_RS24920 NZ_CP085478.1 Protein Homology CDS 5161328 5162833 . - 0 ID=cds-WP_002882529.1;Parent=gene-LI478_RS24920;Dbxref=Genbank:WP_002882529.1;Name=WP_002882529.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rbsA;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224308.1;locus_tag=LI478_RS24920;product=ribose ABC transporter ATP-binding protein RbsA;protein_id=WP_002882529.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5162844 5163263 . - . ID=gene-LI478_RS24925;Name=rbsD;gbkey=Gene;gene=rbsD;gene_biotype=protein_coding;locus_tag=LI478_RS24925 NZ_CP085478.1 Protein Homology CDS 5162844 5163263 . - 0 ID=cds-WP_002882527.1;Parent=gene-LI478_RS24925;Dbxref=Genbank:WP_002882527.1;Name=WP_002882527.1;Ontology_term=GO:0016872;gbkey=CDS;gene=rbsD;go_function=intramolecular lyase activity|0016872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224307.1;locus_tag=LI478_RS24925;product=D-ribose pyranase;protein_id=WP_002882527.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5163449 5165317 . - . ID=gene-LI478_RS24930;Name=kup;gbkey=Gene;gene=kup;gene_biotype=protein_coding;locus_tag=LI478_RS24930 NZ_CP085478.1 Protein Homology CDS 5163449 5165317 . - 0 ID=cds-WP_002882520.1;Parent=gene-LI478_RS24930;Dbxref=Genbank:WP_002882520.1;Name=WP_002882520.1;Ontology_term=GO:0015079,GO:0016020;gbkey=CDS;gene=kup;go_component=membrane|0016020||IEA;go_function=potassium ion transmembrane transporter activity|0015079||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000102304.1;locus_tag=LI478_RS24930;product=low affinity potassium transporter Kup;protein_id=WP_002882520.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5165535 5167034 . + . ID=gene-LI478_RS24935;Name=ravA;gbkey=Gene;gene=ravA;gene_biotype=protein_coding;locus_tag=LI478_RS24935 NZ_CP085478.1 Protein Homology CDS 5165535 5167034 . + 0 ID=cds-WP_004151555.1;Parent=gene-LI478_RS24935;Dbxref=Genbank:WP_004151555.1;Name=WP_004151555.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;gene=ravA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224305.1;locus_tag=LI478_RS24935;product=ATPase RavA;protein_id=WP_004151555.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5167031 5168479 . + . ID=gene-LI478_RS24940;Name=viaA;gbkey=Gene;gene=viaA;gene_biotype=protein_coding;locus_tag=LI478_RS24940 NZ_CP085478.1 Protein Homology CDS 5167031 5168479 . + 0 ID=cds-WP_002882517.1;Parent=gene-LI478_RS24940;Dbxref=Genbank:WP_002882517.1;Name=WP_002882517.1;gbkey=CDS;gene=viaA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224304.1;locus_tag=LI478_RS24940;product=ATPase RavA stimulator ViaA;protein_id=WP_002882517.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5168483 5169475 . - . ID=gene-LI478_RS24945;Name=asnA;gbkey=Gene;gene=asnA;gene_biotype=protein_coding;locus_tag=LI478_RS24945 NZ_CP085478.1 Protein Homology CDS 5168483 5169475 . - 0 ID=cds-WP_002882514.1;Parent=gene-LI478_RS24945;Dbxref=Genbank:WP_002882514.1;Name=WP_002882514.1;Ontology_term=GO:0006529,GO:0004071;gbkey=CDS;gene=asnA;go_function=aspartate-ammonia ligase activity|0004071||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224303.1;locus_tag=LI478_RS24945;product=aspartate--ammonia ligase;protein_id=WP_002882514.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5169627 5170085 . + . ID=gene-LI478_RS24950;Name=asnC;gbkey=Gene;gene=asnC;gene_biotype=protein_coding;locus_tag=LI478_RS24950 NZ_CP085478.1 Protein Homology CDS 5169627 5170085 . + 0 ID=cds-WP_002882510.1;Parent=gene-LI478_RS24950;Dbxref=Genbank:WP_002882510.1;Name=WP_002882510.1;Ontology_term=GO:0043565;gbkey=CDS;gene=asnC;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224302.1;locus_tag=LI478_RS24950;product=transcriptional regulator AsnC;protein_id=WP_002882510.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5170185 5170625 . + . ID=gene-LI478_RS24955;Name=mioC;gbkey=Gene;gene=mioC;gene_biotype=protein_coding;locus_tag=LI478_RS24955 NZ_CP085478.1 Protein Homology CDS 5170185 5170625 . + 0 ID=cds-WP_004144988.1;Parent=gene-LI478_RS24955;Dbxref=Genbank:WP_004144988.1;Name=WP_004144988.1;Ontology_term=GO:0010181;gbkey=CDS;gene=mioC;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224301.1;locus_tag=LI478_RS24955;product=FMN-binding protein MioC;protein_id=WP_004144988.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5171007 5172896 . + . ID=gene-LI478_RS24960;Name=mnmG;gbkey=Gene;gene=mnmG;gene_biotype=protein_coding;locus_tag=LI478_RS24960 NZ_CP085478.1 Protein Homology CDS 5171007 5172896 . + 0 ID=cds-WP_004144989.1;Parent=gene-LI478_RS24960;Dbxref=Genbank:WP_004144989.1;Name=WP_004144989.1;Ontology_term=GO:0002098,GO:0008033,GO:0050660;gbkey=CDS;gene=mnmG;go_function=flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA wobble uridine modification|0002098||IEA,tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000499793.1;locus_tag=LI478_RS24960;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;protein_id=WP_004144989.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5173012 5173635 . + . ID=gene-LI478_RS24965;Name=rsmG;gbkey=Gene;gene=rsmG;gene_biotype=protein_coding;locus_tag=LI478_RS24965 NZ_CP085478.1 Protein Homology CDS 5173012 5173635 . + 0 ID=cds-WP_004151554.1;Parent=gene-LI478_RS24965;Dbxref=Genbank:WP_004151554.1;Name=WP_004151554.1;Ontology_term=GO:0031167,GO:0046118,GO:0008168,GO:0005575;gbkey=CDS;gene=rsmG;go_component=cellular_component|0005575||IEA;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA,7-methylguanosine biosynthetic process|0046118||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229615.1;locus_tag=LI478_RS24965;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=WP_004151554.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5174252 5174632 . + . ID=gene-LI478_RS24970;Name=atpI;gbkey=Gene;gene=atpI;gene_biotype=protein_coding;locus_tag=LI478_RS24970 NZ_CP085478.1 Protein Homology CDS 5174252 5174632 . + 0 ID=cds-WP_004144991.1;Parent=gene-LI478_RS24970;Dbxref=Genbank:WP_004144991.1;Name=WP_004144991.1;gbkey=CDS;gene=atpI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229614.1;locus_tag=LI478_RS24970;product=F0F1 ATP synthase subunit I;protein_id=WP_004144991.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5174640 5175455 . + . ID=gene-LI478_RS24975;Name=atpB;gbkey=Gene;gene=atpB;gene_biotype=protein_coding;locus_tag=LI478_RS24975 NZ_CP085478.1 Protein Homology CDS 5174640 5175455 . + 0 ID=cds-WP_004173838.1;Parent=gene-LI478_RS24975;Dbxref=Genbank:WP_004173838.1;Name=WP_004173838.1;Ontology_term=GO:0015986,GO:0015078,GO:0045263;gbkey=CDS;gene=atpB;go_component=proton-transporting ATP synthase complex%2C coupling factor F(o)|0045263||IEA;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121454.1;locus_tag=LI478_RS24975;product=F0F1 ATP synthase subunit A;protein_id=WP_004173838.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5175505 5175744 . + . ID=gene-LI478_RS24980;Name=atpE;gbkey=Gene;gene=atpE;gene_biotype=protein_coding;locus_tag=LI478_RS24980 NZ_CP085478.1 Protein Homology CDS 5175505 5175744 . + 0 ID=cds-WP_000429386.1;Parent=gene-LI478_RS24980;Dbxref=Genbank:WP_000429386.1;Name=WP_000429386.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpE;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246596.1;locus_tag=LI478_RS24980;product=F0F1 ATP synthase subunit C;protein_id=WP_000429386.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5175795 5176265 . + . ID=gene-LI478_RS24985;Name=atpF;gbkey=Gene;gene=atpF;gene_biotype=protein_coding;locus_tag=LI478_RS24985 NZ_CP085478.1 Protein Homology CDS 5175795 5176265 . + 0 ID=cds-WP_004107293.1;Parent=gene-LI478_RS24985;Dbxref=Genbank:WP_004107293.1;Name=WP_004107293.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpF;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001052215.1;locus_tag=LI478_RS24985;product=F0F1 ATP synthase subunit B;protein_id=WP_004107293.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5176280 5176813 . + . ID=gene-LI478_RS24990;Name=atpH;gbkey=Gene;gene=atpH;gene_biotype=protein_coding;locus_tag=LI478_RS24990 NZ_CP085478.1 Protein Homology CDS 5176280 5176813 . + 0 ID=cds-WP_004144994.1;Parent=gene-LI478_RS24990;Dbxref=Genbank:WP_004144994.1;Name=WP_004144994.1;Ontology_term=GO:0015986,GO:0046933,GO:0016020;gbkey=CDS;gene=atpH;go_component=membrane|0016020||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966593.1;locus_tag=LI478_RS24990;product=F0F1 ATP synthase subunit delta;protein_id=WP_004144994.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5176826 5178367 . + . ID=gene-LI478_RS24995;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;locus_tag=LI478_RS24995 NZ_CP085478.1 Protein Homology CDS 5176826 5178367 . + 0 ID=cds-WP_004144995.1;Parent=gene-LI478_RS24995;Dbxref=Genbank:WP_004144995.1;Name=WP_004144995.1;Ontology_term=GO:0015986,GO:0046933,GO:0000275,GO:0045261,GO:0045262;gbkey=CDS;gene=atpA;go_component=mitochondrial proton-transporting ATP synthase complex%2C catalytic sector F(1)|0000275||IEA,proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA,plasma membrane proton-transporting ATP synthase complex%2C catalytic core F(1)|0045262||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001176751.1;locus_tag=LI478_RS24995;product=F0F1 ATP synthase subunit alpha;protein_id=WP_004144995.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5178418 5179281 . + . ID=gene-LI478_RS25000;Name=atpG;gbkey=Gene;gene=atpG;gene_biotype=protein_coding;locus_tag=LI478_RS25000 NZ_CP085478.1 Protein Homology CDS 5178418 5179281 . + 0 ID=cds-WP_004144996.1;Parent=gene-LI478_RS25000;Dbxref=Genbank:WP_004144996.1;Name=WP_004144996.1;Ontology_term=GO:0015986,GO:0046933,GO:0045261;gbkey=CDS;gene=atpG;go_component=proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882764.1;locus_tag=LI478_RS25000;product=F0F1 ATP synthase subunit gamma;protein_id=WP_004144996.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5179308 5180690 . + . ID=gene-LI478_RS25005;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=LI478_RS25005 NZ_CP085478.1 Protein Homology CDS 5179308 5180690 . + 0 ID=cds-WP_004144997.1;Parent=gene-LI478_RS25005;Dbxref=Genbank:WP_004144997.1;Name=WP_004144997.1;Ontology_term=GO:0015986,GO:0046933,GO:0000275,GO:0045261,GO:0045262;gbkey=CDS;gene=atpD;go_component=mitochondrial proton-transporting ATP synthase complex%2C catalytic sector F(1)|0000275||IEA,proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA,plasma membrane proton-transporting ATP synthase complex%2C catalytic core F(1)|0045262||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017800291.1;locus_tag=LI478_RS25005;product=F0F1 ATP synthase subunit beta;protein_id=WP_004144997.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5180711 5181130 . + . ID=gene-LI478_RS25010;Name=LI478_RS25010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25010 NZ_CP085478.1 Protein Homology CDS 5180711 5181130 . + 0 ID=cds-WP_001251971.1;Parent=gene-LI478_RS25010;Dbxref=Genbank:WP_001251971.1;Name=WP_001251971.1;Ontology_term=GO:0015986,GO:0046933;gbkey=CDS;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001251972.1;locus_tag=LI478_RS25010;product=F0F1 ATP synthase subunit epsilon;protein_id=WP_001251971.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5181827 5183197 . + . ID=gene-LI478_RS25015;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=LI478_RS25015 NZ_CP085478.1 Protein Homology CDS 5181827 5183197 . + 0 ID=cds-WP_004187970.1;Parent=gene-LI478_RS25015;Dbxref=Genbank:WP_004187970.1;Name=WP_004187970.1;Ontology_term=GO:0000902,GO:0006048,GO:0009252,GO:0000287,GO:0003977,GO:0019134;gbkey=CDS;gene=glmU;go_function=magnesium ion binding|0000287||IEA,UDP-N-acetylglucosamine diphosphorylase activity|0003977||IEA,glucosamine-1-phosphate N-acetyltransferase activity|0019134||IEA;go_process=cell morphogenesis|0000902||IEA,UDP-N-acetylglucosamine biosynthetic process|0006048||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229602.1;locus_tag=LI478_RS25015;product=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;protein_id=WP_004187970.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5183381 5185210 . + . ID=gene-LI478_RS25020;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=LI478_RS25020 NZ_CP085478.1 Protein Homology CDS 5183381 5185210 . + 0 ID=cds-WP_004150309.1;Parent=gene-LI478_RS25020;Dbxref=Genbank:WP_004150309.1;Name=WP_004150309.1;Ontology_term=GO:0006040,GO:0009252,GO:0004360;gbkey=CDS;gene=glmS;go_function=glutamine-fructose-6-phosphate transaminase (isomerizing) activity|0004360||IEA;go_process=amino sugar metabolic process|0006040||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121462.1;locus_tag=LI478_RS25020;product=glutamine--fructose-6-phosphate transaminase (isomerizing);protein_id=WP_004150309.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5185547 5186587 . + . ID=gene-LI478_RS25025;Name=pstS;gbkey=Gene;gene=pstS;gene_biotype=protein_coding;locus_tag=LI478_RS25025 NZ_CP085478.1 Protein Homology CDS 5185547 5186587 . + 0 ID=cds-WP_016531022.1;Parent=gene-LI478_RS25025;Dbxref=Genbank:WP_016531022.1;Name=WP_016531022.1;Ontology_term=GO:0035435,GO:0042301,GO:0043190;gbkey=CDS;gene=pstS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=phosphate ion binding|0042301||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229600.1;locus_tag=LI478_RS25025;product=phosphate ABC transporter substrate-binding protein PstS;protein_id=WP_016531022.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5186716 5187675 . + . ID=gene-LI478_RS25030;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=LI478_RS25030 NZ_CP085478.1 Protein Homology CDS 5186716 5187675 . + 0 ID=cds-WP_004145004.1;Parent=gene-LI478_RS25030;Dbxref=Genbank:WP_004145004.1;Name=WP_004145004.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=pstC;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008806729.1;locus_tag=LI478_RS25030;product=phosphate ABC transporter permease PstC;protein_id=WP_004145004.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5187675 5188565 . + . ID=gene-LI478_RS25035;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=LI478_RS25035 NZ_CP085478.1 Protein Homology CDS 5187675 5188565 . + 0 ID=cds-WP_004151547.1;Parent=gene-LI478_RS25035;Dbxref=Genbank:WP_004151547.1;Name=WP_004151547.1;Ontology_term=GO:0035435,GO:0005886;gbkey=CDS;gene=pstA;go_component=plasma membrane|0005886||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229598.1;locus_tag=LI478_RS25035;product=phosphate ABC transporter permease PstA;protein_id=WP_004151547.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5188613 5189386 . + . ID=gene-LI478_RS25040;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=LI478_RS25040 NZ_CP085478.1 Protein Homology CDS 5188613 5189386 . + 0 ID=cds-WP_004145006.1;Parent=gene-LI478_RS25040;Dbxref=Genbank:WP_004145006.1;Name=WP_004145006.1;Ontology_term=GO:0005524,GO:0015415,GO:0009898,GO:0055052;gbkey=CDS;gene=pstB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000063125.1;locus_tag=LI478_RS25040;product=phosphate ABC transporter ATP-binding protein PstB;protein_id=WP_004145006.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5189437 5190162 . + . ID=gene-LI478_RS25045;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;locus_tag=LI478_RS25045 NZ_CP085478.1 Protein Homology CDS 5189437 5190162 . + 0 ID=cds-WP_004145007.1;Parent=gene-LI478_RS25045;Dbxref=Genbank:WP_004145007.1;Name=WP_004145007.1;Ontology_term=GO:0030643;gbkey=CDS;gene=phoU;go_process=cellular phosphate ion homeostasis|0030643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229596.1;locus_tag=LI478_RS25045;product=phosphate signaling complex protein PhoU;protein_id=WP_004145007.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5190640 5192274 . + . ID=gene-LI478_RS25050;Name=LI478_RS25050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25050 NZ_CP085478.1 Protein Homology CDS 5190640 5192274 . + 0 ID=cds-WP_064153630.1;Parent=gene-LI478_RS25050;Dbxref=Genbank:WP_064153630.1;Name=WP_064153630.1;Ontology_term=GO:0034219,GO:0015288,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=porin activity|0015288||IEA;go_process=carbohydrate transmembrane transport|0034219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229594.1;locus_tag=LI478_RS25050;product=carbohydrate porin;protein_id=WP_064153630.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5192313 5193479 . + . ID=gene-LI478_RS25055;Name=LI478_RS25055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25055 NZ_CP085478.1 Protein Homology CDS 5192313 5193479 . + 0 ID=cds-WP_004145104.1;Parent=gene-LI478_RS25055;Dbxref=Genbank:WP_004145104.1;Name=WP_004145104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016946150.1;locus_tag=LI478_RS25055;product=alpha/beta hydrolase-fold protein;protein_id=WP_004145104.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5193529 5194248 . + . ID=gene-LI478_RS25060;Name=LI478_RS25060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25060 NZ_CP085478.1 Protein Homology CDS 5193529 5194248 . + 0 ID=cds-WP_004901614.1;Parent=gene-LI478_RS25060;Dbxref=Genbank:WP_004901614.1;Name=WP_004901614.1;Ontology_term=GO:0006044,GO:0004342;gbkey=CDS;go_function=glucosamine-6-phosphate deaminase activity|0004342||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229591.1;locus_tag=LI478_RS25060;product=glucosamine-6-phosphate deaminase;protein_id=WP_004901614.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5194328 5194993 . - . ID=gene-LI478_RS25065;Name=yieH;gbkey=Gene;gene=yieH;gene_biotype=protein_coding;locus_tag=LI478_RS25065 NZ_CP085478.1 Protein Homology CDS 5194328 5194993 . - 0 ID=cds-WP_004145102.1;Parent=gene-LI478_RS25065;Dbxref=Genbank:WP_004145102.1;Name=WP_004145102.1;gbkey=CDS;gene=yieH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229590.1;locus_tag=LI478_RS25065;product=6-phosphogluconate phosphatase;protein_id=WP_004145102.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5195163 5196500 . + . ID=gene-LI478_RS25070;Name=LI478_RS25070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25070 NZ_CP085478.1 Protein Homology CDS 5195163 5196500 . + 0 ID=cds-WP_004145100.1;Parent=gene-LI478_RS25070;Dbxref=Genbank:WP_004145100.1;Name=WP_004145100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229588.1;locus_tag=LI478_RS25070;product=NCS2 family permease;protein_id=WP_004145100.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5196546 5197112 . - . ID=gene-LI478_RS25075;Name=LI478_RS25075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25075 NZ_CP085478.1 Protein Homology CDS 5196546 5197112 . - 0 ID=cds-WP_004151543.1;Parent=gene-LI478_RS25075;Dbxref=Genbank:WP_004151543.1;Name=WP_004151543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229587.1;locus_tag=LI478_RS25075;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_004151543.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5197149 5197724 . - . ID=gene-LI478_RS25080;Name=LI478_RS25080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25080 NZ_CP085478.1 Protein Homology CDS 5197149 5197724 . - 0 ID=cds-WP_004145098.1;Parent=gene-LI478_RS25080;Dbxref=Genbank:WP_004145098.1;Name=WP_004145098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229586.1;locus_tag=LI478_RS25080;product=hypothetical protein;protein_id=WP_004145098.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5198034 5198993 . - . ID=gene-LI478_RS25085;Name=yidZ;gbkey=Gene;gene=yidZ;gene_biotype=protein_coding;locus_tag=LI478_RS25085 NZ_CP085478.1 Protein Homology CDS 5198034 5198993 . - 0 ID=cds-WP_004211197.1;Parent=gene-LI478_RS25085;Dbxref=Genbank:WP_004211197.1;Name=WP_004211197.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yidZ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229585.1;locus_tag=LI478_RS25085;product=HTH-type transcriptional regulator YidZ;protein_id=WP_004211197.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5198968 5200146 . - . ID=gene-LI478_RS25090;Name=LI478_RS25090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25090 NZ_CP085478.1 Protein Homology CDS 5198968 5200146 . - 0 ID=cds-WP_014908135.1;Parent=gene-LI478_RS25090;Dbxref=Genbank:WP_014908135.1;Name=WP_014908135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229584.1;locus_tag=LI478_RS25090;product=MFS transporter;protein_id=WP_014908135.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5200246 5200665 . - . ID=gene-LI478_RS25095;Name=LI478_RS25095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25095 NZ_CP085478.1 Protein Homology CDS 5200246 5200665 . - 0 ID=cds-WP_004151539.1;Parent=gene-LI478_RS25095;Dbxref=Genbank:WP_004151539.1;Name=WP_004151539.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229583.1;locus_tag=LI478_RS25095;product=GNAT family N-acetyltransferase;protein_id=WP_004151539.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5200785 5202149 . - . ID=gene-LI478_RS25100;Name=mnmE;gbkey=Gene;gene=mnmE;gene_biotype=protein_coding;locus_tag=LI478_RS25100 NZ_CP085478.1 Protein Homology CDS 5200785 5202149 . - 0 ID=cds-WP_004181597.1;Parent=gene-LI478_RS25100;Dbxref=Genbank:WP_004181597.1;Name=WP_004181597.1;Ontology_term=GO:0006400,GO:0003924,GO:0005515,GO:0005525;gbkey=CDS;gene=mnmE;go_function=GTPase activity|0003924||IEA,protein binding|0005515||IEA,GTP binding|0005525||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462743.1;locus_tag=LI478_RS25100;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;protein_id=WP_004181597.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5202344 5203990 . - . ID=gene-LI478_RS25105;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=LI478_RS25105 NZ_CP085478.1 Protein Homology CDS 5202344 5203990 . - 0 ID=cds-WP_004150295.1;Parent=gene-LI478_RS25105;Dbxref=Genbank:WP_004150295.1;Name=WP_004150295.1;Ontology_term=GO:0032977,GO:0016020;gbkey=CDS;gene=yidC;go_component=membrane|0016020||IEA;go_function=membrane insertase activity|0032977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462742.1;locus_tag=LI478_RS25105;product=membrane protein insertase YidC;protein_id=WP_004150295.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5203993 5204250 . - . ID=gene-LI478_RS25110;Name=yidD;gbkey=Gene;gene=yidD;gene_biotype=protein_coding;locus_tag=LI478_RS25110 NZ_CP085478.1 Protein Homology CDS 5203993 5204250 . - 0 ID=cds-WP_004151536.1;Parent=gene-LI478_RS25110;Dbxref=Genbank:WP_004151536.1;Name=WP_004151536.1;gbkey=CDS;gene=yidD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462741.1;locus_tag=LI478_RS25110;product=membrane protein insertion efficiency factor YidD;protein_id=WP_004151536.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5204214 5204573 . - . ID=gene-LI478_RS25115;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=LI478_RS25115 NZ_CP085478.1 Protein Homology CDS 5204214 5204573 . - 0 ID=cds-WP_004151535.1;Parent=gene-LI478_RS25115;Dbxref=Genbank:WP_004151535.1;Name=WP_004151535.1;Ontology_term=GO:0006396,GO:0004526;gbkey=CDS;gene=rnpA;go_function=ribonuclease P activity|0004526||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014172301.1;locus_tag=LI478_RS25115;product=ribonuclease P protein component;protein_id=WP_004151535.1;transl_table=11 NZ_CP085478.1 RefSeq gene 5204589 5204729 . - . ID=gene-LI478_RS25120;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=LI478_RS25120 NZ_CP085478.1 Protein Homology CDS 5204589 5204729 . - 0 ID=cds-WP_000831330.1;Parent=gene-LI478_RS25120;Dbxref=Genbank:WP_000831330.1;Name=WP_000831330.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmH;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001686914.1;locus_tag=LI478_RS25120;product=50S ribosomal protein L34;protein_id=WP_000831330.1;transl_table=11 ##sequence-region NZ_CP085479.1 1 144892 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=573 NZ_CP085479.1 RefSeq region 1 144892 . + . ID=NZ_CP085479.1:1..144892;Dbxref=taxon:573;Is_circular=true;Name=p1;collected-by=Shanghai Jiao Tong University;collection-date=2015;country=China:Shanghai;gbkey=Src;genome=plasmid;isolation-source=blood;lat-lon=31.22337 N 121.49295 E;mol_type=genomic DNA;nat-host=Homo sapiens;plasmid-name=p1;strain=Kp1604 NZ_CP085479.1 RefSeq gene 1 2127 . + . ID=gene-LI478_RS25125;Name=LI478_RS25125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25125 NZ_CP085479.1 Protein Homology CDS 1 2127 . + 0 ID=cds-WP_004213640.1;Parent=gene-LI478_RS25125;Dbxref=Genbank:WP_004213640.1;Name=WP_004213640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418711.1;locus_tag=LI478_RS25125;product=TonB-dependent receptor family protein;protein_id=WP_004213640.1;transl_table=11 NZ_CP085479.1 RefSeq pseudogene 2202 2321 . + . ID=gene-LI478_RS25130;Name=LI478_RS25130;end_range=2321,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS25130;partial=true;pseudo=true NZ_CP085479.1 Protein Homology CDS 2202 2321 . + 0 ID=cds-LI478_RS25130;Parent=gene-LI478_RS25130;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2321,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000879155.1;locus_tag=LI478_RS25130;partial=true;product=Fe3+-citrate ABC transporter substrate-binding protein;pseudo=true;transl_table=11 NZ_CP085479.1 RefSeq gene 2502 2723 . + . ID=gene-LI478_RS25135;Name=LI478_RS25135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25135 NZ_CP085479.1 Protein Homology CDS 2502 2723 . + 0 ID=cds-WP_004213643.1;Parent=gene-LI478_RS25135;Dbxref=Genbank:WP_004213643.1;Name=WP_004213643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004213643.1;locus_tag=LI478_RS25135;product=DUF2188 domain-containing protein;protein_id=WP_004213643.1;transl_table=11 NZ_CP085479.1 RefSeq pseudogene 2821 3324 . + . ID=gene-LI478_RS25140;Name=LI478_RS25140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS25140;partial=true;pseudo=true;start_range=.,2821 NZ_CP085479.1 Protein Homology CDS 2821 3324 . + 0 ID=cds-LI478_RS25140;Parent=gene-LI478_RS25140;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004181894.1;locus_tag=LI478_RS25140;partial=true;product=DUF4113 domain-containing protein;pseudo=true;start_range=.,2821;transl_table=11 NZ_CP085479.1 RefSeq gene 3425 3868 . + . ID=gene-LI478_RS25145;Name=LI478_RS25145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25145 NZ_CP085479.1 Protein Homology CDS 3425 3868 . + 0 ID=cds-WP_004026357.1;Parent=gene-LI478_RS25145;Dbxref=Genbank:WP_004026357.1;Name=WP_004026357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004181895.1;locus_tag=LI478_RS25145;product=DUF2384 domain-containing protein;protein_id=WP_004026357.1;transl_table=11 NZ_CP085479.1 RefSeq gene 3865 4335 . + . ID=gene-LI478_RS25150;Name=LI478_RS25150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25150 NZ_CP085479.1 Protein Homology CDS 3865 4335 . + 0 ID=cds-WP_004026354.1;Parent=gene-LI478_RS25150;Dbxref=Genbank:WP_004026354.1;Name=WP_004026354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004144067.1;locus_tag=LI478_RS25150;product=RES family NAD+ phosphorylase;protein_id=WP_004026354.1;transl_table=11 NZ_CP085479.1 RefSeq gene 4818 5515 . + . ID=gene-LI478_RS25155;Name=LI478_RS25155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25155 NZ_CP085479.1 Protein Homology CDS 4818 5067 . + 0 ID=cds-WP_223175001.1;Parent=gene-LI478_RS25155;Dbxref=Genbank:WP_223175001.1;Name=WP_223175001.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=LI478_RS25155;product=IS1-like element IS1A family transposase;protein_id=WP_223175001.1;transl_table=11 NZ_CP085479.1 Protein Homology CDS 5067 5515 . + 2 ID=cds-WP_223175001.1;Parent=gene-LI478_RS25155;Dbxref=Genbank:WP_223175001.1;Name=WP_223175001.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=LI478_RS25155;product=IS1-like element IS1A family transposase;protein_id=WP_223175001.1;transl_table=11 NZ_CP085479.1 RefSeq gene 6901 7551 . - . ID=gene-LI478_RS25160;Name=LI478_RS25160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25160 NZ_CP085479.1 Protein Homology CDS 6901 7551 . - 0 ID=cds-WP_068893702.1;Parent=gene-LI478_RS25160;Dbxref=Genbank:WP_068893702.1;Name=WP_068893702.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018381.2;locus_tag=LI478_RS25160;product=DUF1173 family protein;protein_id=WP_068893702.1;transl_table=11 NZ_CP085479.1 RefSeq gene 7584 7850 . - . ID=gene-LI478_RS25165;Name=LI478_RS25165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25165 NZ_CP085479.1 Protein Homology CDS 7584 7850 . - 0 ID=cds-WP_223175074.1;Parent=gene-LI478_RS25165;Dbxref=Genbank:WP_223175074.1;Name=WP_223175074.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018381.2;locus_tag=LI478_RS25165;product=DUF1173 family protein;protein_id=WP_223175074.1;transl_table=11 NZ_CP085479.1 RefSeq gene 8028 8522 . + . ID=gene-LI478_RS25170;Name=LI478_RS25170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25170 NZ_CP085479.1 Protein Homology CDS 8028 8522 . + 0 ID=cds-WP_004212794.1;Parent=gene-LI478_RS25170;Dbxref=Genbank:WP_004212794.1;Name=WP_004212794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004212794.1;locus_tag=LI478_RS25170;product=thermonuclease family protein;protein_id=WP_004212794.1;transl_table=11 NZ_CP085479.1 RefSeq gene 8859 9257 . + . ID=gene-LI478_RS25175;Name=LI478_RS25175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25175 NZ_CP085479.1 Protein Homology CDS 8859 9257 . + 0 ID=cds-WP_004212796.1;Parent=gene-LI478_RS25175;Dbxref=Genbank:WP_004212796.1;Name=WP_004212796.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910103.1;locus_tag=LI478_RS25175;product=H-NS family nucleoid-associated regulatory protein;protein_id=WP_004212796.1;transl_table=11 NZ_CP085479.1 RefSeq gene 9575 10414 . - . ID=gene-LI478_RS25180;Name=LI478_RS25180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25180 NZ_CP085479.1 Protein Homology CDS 9575 10414 . - 0 ID=cds-WP_004212797.1;Parent=gene-LI478_RS25180;Dbxref=Genbank:WP_004212797.1;Name=WP_004212797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004212797.1;locus_tag=LI478_RS25180;product=aldo/keto reductase;protein_id=WP_004212797.1;transl_table=11 NZ_CP085479.1 RefSeq gene 10411 10890 . - . ID=gene-LI478_RS25185;Name=LI478_RS25185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25185 NZ_CP085479.1 Protein Homology CDS 10411 10890 . - 0 ID=cds-WP_004212799.1;Parent=gene-LI478_RS25185;Dbxref=Genbank:WP_004212799.1;Name=WP_004212799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004212799.1;locus_tag=LI478_RS25185;product=cyclophilin-like fold protein;protein_id=WP_004212799.1;transl_table=11 NZ_CP085479.1 RefSeq pseudogene 11028 11192 . + . ID=gene-LI478_RS25190;Name=LI478_RS25190;end_range=11192,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS25190;partial=true;pseudo=true;start_range=.,11028 NZ_CP085479.1 Protein Homology CDS 11028 11192 . + 0 ID=cds-LI478_RS25190;Parent=gene-LI478_RS25190;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=11192,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611683.1;locus_tag=LI478_RS25190;partial=true;product=Tn3 family transposase;pseudo=true;start_range=.,11028;transl_table=11 NZ_CP085479.1 RefSeq gene 11475 11705 . - . ID=gene-LI478_RS25195;Name=LI478_RS25195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25195 NZ_CP085479.1 Protein Homology CDS 11475 11705 . - 0 ID=cds-WP_011154571.1;Parent=gene-LI478_RS25195;Dbxref=Genbank:WP_011154571.1;Name=WP_011154571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004144492.1;locus_tag=LI478_RS25195;product=hypothetical protein;protein_id=WP_011154571.1;transl_table=11 NZ_CP085479.1 RefSeq gene 11891 13666 . - . ID=gene-LI478_RS25200;Name=LI478_RS25200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25200 NZ_CP085479.1 Protein Homology CDS 11891 13666 . - 0 ID=cds-WP_004212803.1;Parent=gene-LI478_RS25200;Dbxref=Genbank:WP_004212803.1;Name=WP_004212803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004212803.1;locus_tag=LI478_RS25200;product=ABC transporter permease subunit;protein_id=WP_004212803.1;transl_table=11 NZ_CP085479.1 RefSeq gene 13685 15211 . - . ID=gene-LI478_RS25205;Name=LI478_RS25205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25205 NZ_CP085479.1 Protein Homology CDS 13685 15211 . - 0 ID=cds-WP_004212804.1;Parent=gene-LI478_RS25205;Dbxref=Genbank:WP_004212804.1;Name=WP_004212804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004212804.1;locus_tag=LI478_RS25205;product=ABC transporter substrate-binding protein;protein_id=WP_004212804.1;transl_table=11 NZ_CP085479.1 RefSeq gene 15222 16466 . - . ID=gene-LI478_RS25210;Name=LI478_RS25210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25210 NZ_CP085479.1 Protein Homology CDS 15222 16466 . - 0 ID=cds-WP_004212807.1;Parent=gene-LI478_RS25210;Dbxref=Genbank:WP_004212807.1;Name=WP_004212807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004212807.1;locus_tag=LI478_RS25210;product=MFS transporter;protein_id=WP_004212807.1;transl_table=11 NZ_CP085479.1 RefSeq gene 16493 17326 . - . ID=gene-LI478_RS25215;Name=LI478_RS25215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25215 NZ_CP085479.1 Protein Homology CDS 16493 17326 . - 0 ID=cds-WP_004212808.1;Parent=gene-LI478_RS25215;Dbxref=Genbank:WP_004212808.1;Name=WP_004212808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004212808.1;locus_tag=LI478_RS25215;product=ABC transporter ATP-binding protein;protein_id=WP_004212808.1;transl_table=11 NZ_CP085479.1 RefSeq gene 17323 18132 . - . ID=gene-LI478_RS25220;Name=LI478_RS25220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25220 NZ_CP085479.1 Protein Homology CDS 17323 18132 . - 0 ID=cds-WP_011154569.1;Parent=gene-LI478_RS25220;Dbxref=Genbank:WP_011154569.1;Name=WP_011154569.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004144485.1;locus_tag=LI478_RS25220;product=ATP-binding cassette domain-containing protein;protein_id=WP_011154569.1;transl_table=11 NZ_CP085479.1 RefSeq pseudogene 18568 19050 . - . ID=gene-LI478_RS25225;Name=LI478_RS25225;end_range=19050,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS25225;partial=true;pseudo=true;start_range=.,18568 NZ_CP085479.1 Protein Homology CDS 18568 19050 . - 0 ID=cds-LI478_RS25225;Parent=gene-LI478_RS25225;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0016787;end_range=19050,.;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017903987.1;locus_tag=LI478_RS25225;partial=true;product=M20/M25/M40 family metallo-hydrolase;pseudo=true;start_range=.,18568;transl_table=11 NZ_CP085479.1 RefSeq gene 19617 19742 . + . ID=gene-LI478_RS26480;Name=LI478_RS26480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS26480 NZ_CP085479.1 GeneMarkS-2+ CDS 19617 19742 . + 0 ID=cds-WP_011251267.1;Parent=gene-LI478_RS26480;Dbxref=Genbank:WP_011251267.1;Name=WP_011251267.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LI478_RS26480;product=hypothetical protein;protein_id=WP_011251267.1;transl_table=11 NZ_CP085479.1 RefSeq gene 19746 20231 . + . ID=gene-LI478_RS25230;Name=LI478_RS25230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25230 NZ_CP085479.1 GeneMarkS-2+ CDS 19746 20231 . + 0 ID=cds-WP_011154565.1;Parent=gene-LI478_RS25230;Dbxref=Genbank:WP_011154565.1;Name=WP_011154565.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LI478_RS25230;product=hypothetical protein;protein_id=WP_011154565.1;transl_table=11 NZ_CP085479.1 RefSeq pseudogene 20328 21314 . + . ID=gene-LI478_RS25235;Name=LI478_RS25235;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS25235;pseudo=true NZ_CP085479.1 Protein Homology CDS 20328 21314 . + 0 ID=cds-LI478_RS25235;Parent=gene-LI478_RS25235;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001395480.1;locus_tag=LI478_RS25235;product=IS630 family transposase;pseudo=true;transl_table=11 NZ_CP085479.1 RefSeq gene 21690 22190 . - . ID=gene-LI478_RS25240;Name=LI478_RS25240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25240 NZ_CP085479.1 Protein Homology CDS 21690 22190 . - 0 ID=cds-WP_004212823.1;Parent=gene-LI478_RS25240;Dbxref=Genbank:WP_004212823.1;Name=WP_004212823.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004212823.1;locus_tag=LI478_RS25240;product=transcriptional repressor;protein_id=WP_004212823.1;transl_table=11 NZ_CP085479.1 RefSeq gene 22335 22736 . + . ID=gene-LI478_RS25245;Name=hisI;gbkey=Gene;gene=hisI;gene_biotype=protein_coding;locus_tag=LI478_RS25245 NZ_CP085479.1 Protein Homology CDS 22335 22736 . + 0 ID=cds-WP_004212825.1;Parent=gene-LI478_RS25245;Dbxref=Genbank:WP_004212825.1;Name=WP_004212825.1;Ontology_term=GO:0000105,GO:0004635;gbkey=CDS;gene=hisI;go_function=phosphoribosyl-AMP cyclohydrolase activity|0004635||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004212825.1;locus_tag=LI478_RS25245;product=phosphoribosyl-AMP cyclohydrolase;protein_id=WP_004212825.1;transl_table=11 NZ_CP085479.1 RefSeq gene 22773 23993 . + . ID=gene-LI478_RS25250;Name=zigA;gbkey=Gene;gene=zigA;gene_biotype=protein_coding;locus_tag=LI478_RS25250 NZ_CP085479.1 Protein Homology CDS 22773 23993 . + 0 ID=cds-WP_004212827.1;Parent=gene-LI478_RS25250;Dbxref=Genbank:WP_004212827.1;Name=WP_004212827.1;gbkey=CDS;gene=zigA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004212827.1;locus_tag=LI478_RS25250;product=zinc metallochaperone GTPase ZigA;protein_id=WP_004212827.1;transl_table=11 NZ_CP085479.1 RefSeq gene 24262 24687 . - . ID=gene-LI478_RS25255;Name=LI478_RS25255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25255 NZ_CP085479.1 GeneMarkS-2+ CDS 24262 24687 . - 0 ID=cds-WP_227394188.1;Parent=gene-LI478_RS25255;Dbxref=Genbank:WP_227394188.1;Name=WP_227394188.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LI478_RS25255;product=hypothetical protein;protein_id=WP_227394188.1;transl_table=11 NZ_CP085479.1 RefSeq gene 24827 25795 . + . ID=gene-LI478_RS25260;Name=LI478_RS25260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25260 NZ_CP085479.1 Protein Homology CDS 24827 25795 . + 0 ID=cds-WP_004225014.1-12;Parent=gene-LI478_RS25260;Dbxref=Genbank:WP_004225014.1;Name=WP_004225014.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=LI478_RS25260;product=IS5 family transposase;protein_id=WP_004225014.1;transl_table=11 NZ_CP085479.1 RefSeq pseudogene 25910 26077 . - . ID=gene-LI478_RS25265;Name=LI478_RS25265;end_range=26077,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS25265;partial=true;pseudo=true NZ_CP085479.1 Protein Homology CDS 25910 26077 . - 0 ID=cds-LI478_RS25265;Parent=gene-LI478_RS25265;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=26077,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558263.1;locus_tag=LI478_RS25265;partial=true;product=IS1 family transposase;pseudo=true;transl_table=11 NZ_CP085479.1 RefSeq gene 26381 27310 . + . ID=gene-LI478_RS25270;Name=LI478_RS25270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25270 NZ_CP085479.1 Protein Homology CDS 26381 27310 . + 0 ID=cds-WP_004213558.1;Parent=gene-LI478_RS25270;Dbxref=Genbank:WP_004213558.1;Name=WP_004213558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490541.1;locus_tag=LI478_RS25270;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WP_004213558.1;transl_table=11 NZ_CP085479.1 RefSeq gene 27455 28234 . - . ID=gene-LI478_RS25275;Name=LI478_RS25275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25275 NZ_CP085479.1 Protein Homology CDS 27455 28234 . - 0 ID=cds-WP_004213560.1;Parent=gene-LI478_RS25275;Dbxref=Genbank:WP_004213560.1;Name=WP_004213560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229620.1;locus_tag=LI478_RS25275;product=site-specific integrase;protein_id=WP_004213560.1;transl_table=11 NZ_CP085479.1 RefSeq gene 28231 29052 . - . ID=gene-LI478_RS25280;Name=LI478_RS25280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25280 NZ_CP085479.1 Protein Homology CDS 28231 29052 . - 0 ID=cds-WP_004213562.1;Parent=gene-LI478_RS25280;Dbxref=Genbank:WP_004213562.1;Name=WP_004213562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020805487.1;locus_tag=LI478_RS25280;product=hypothetical protein;protein_id=WP_004213562.1;transl_table=11 NZ_CP085479.1 RefSeq gene 29976 30950 . - . ID=gene-LI478_RS25285;Name=LI478_RS25285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25285 NZ_CP085479.1 Protein Homology CDS 29976 30950 . - 0 ID=cds-WP_004213565.1;Parent=gene-LI478_RS25285;Dbxref=Genbank:WP_004213565.1;Name=WP_004213565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004213565.1;locus_tag=LI478_RS25285;product=sensor domain-containing diguanylate cyclase;protein_id=WP_004213565.1;transl_table=11 NZ_CP085479.1 RefSeq gene 31587 32495 . + . ID=gene-LI478_RS25290;Name=LI478_RS25290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25290 NZ_CP085479.1 Protein Homology CDS 31587 32495 . + 0 ID=cds-WP_023302803.1;Parent=gene-LI478_RS25290;Dbxref=Genbank:WP_023302803.1;Name=WP_023302803.1;Ontology_term=GO:0003676,GO:0004519;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001372261.1;locus_tag=LI478_RS25290;product=HNH endonuclease;protein_id=WP_023302803.1;transl_table=11 NZ_CP085479.1 RefSeq gene 32882 33232 . - . ID=gene-LI478_RS25295;Name=LI478_RS25295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25295 NZ_CP085479.1 Protein Homology CDS 32882 33232 . - 0 ID=cds-WP_004213569.1;Parent=gene-LI478_RS25295;Dbxref=Genbank:WP_004213569.1;Name=WP_004213569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000647571.1;locus_tag=LI478_RS25295;product=DUF305 domain-containing protein;protein_id=WP_004213569.1;transl_table=11 NZ_CP085479.1 RefSeq gene 33376 33807 . - . ID=gene-LI478_RS25300;Name=silE;gbkey=Gene;gene=silE;gene_biotype=protein_coding;locus_tag=LI478_RS25300 NZ_CP085479.1 Protein Homology CDS 33376 33807 . - 0 ID=cds-WP_023302802.1;Parent=gene-LI478_RS25300;Dbxref=Genbank:WP_023302802.1;Name=WP_023302802.1;gbkey=CDS;gene=silE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000790485.1;locus_tag=LI478_RS25300;product=silver-binding protein SilE;protein_id=WP_023302802.1;transl_table=11 NZ_CP085479.1 RefSeq gene 34058 35533 . - . ID=gene-LI478_RS25305;Name=silS;gbkey=Gene;gene=silS;gene_biotype=protein_coding;locus_tag=LI478_RS25305 NZ_CP085479.1 Protein Homology CDS 34058 35533 . - 0 ID=cds-WP_000555737.1;Parent=gene-LI478_RS25305;Dbxref=Genbank:WP_000555737.1;Name=WP_000555737.1;gbkey=CDS;gene=silS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003032875.1;locus_tag=LI478_RS25305;product=copper/silver sensor histidine kinase SilS;protein_id=WP_000555737.1;transl_table=11 NZ_CP085479.1 RefSeq gene 35526 36206 . - . ID=gene-LI478_RS25310;Name=silR;gbkey=Gene;gene=silR;gene_biotype=protein_coding;locus_tag=LI478_RS25310 NZ_CP085479.1 Protein Homology CDS 35526 36206 . - 0 ID=cds-WP_004213574.1;Parent=gene-LI478_RS25310;Dbxref=Genbank:WP_004213574.1;Name=WP_004213574.1;gbkey=CDS;gene=silR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001572351.1;locus_tag=LI478_RS25310;product=copper/silver response regulator transcription factor SilR;protein_id=WP_004213574.1;transl_table=11 NZ_CP085479.1 RefSeq gene 36396 37781 . + . ID=gene-LI478_RS25315;Name=silC;gbkey=Gene;gene=silC;gene_biotype=protein_coding;locus_tag=LI478_RS25315 NZ_CP085479.1 Protein Homology CDS 36396 37781 . + 0 ID=cds-WP_004213577.1;Parent=gene-LI478_RS25315;Dbxref=Genbank:WP_004213577.1;Name=WP_004213577.1;gbkey=CDS;gene=silC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001572989.1;locus_tag=LI478_RS25315;product=Cu(+)/Ag(+) efflux RND transporter outer membrane channel SilC;protein_id=WP_004213577.1;transl_table=11 NZ_CP085479.1 RefSeq gene 37810 38172 . + . ID=gene-LI478_RS25320;Name=cusF;gbkey=Gene;gene=cusF;gene_biotype=protein_coding;locus_tag=LI478_RS25320 NZ_CP085479.1 Protein Homology CDS 37810 38172 . + 0 ID=cds-WP_004213578.1;Parent=gene-LI478_RS25320;Dbxref=Genbank:WP_004213578.1;Name=WP_004213578.1;gbkey=CDS;gene=cusF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009654303.1;locus_tag=LI478_RS25320;product=cation efflux system protein CusF;protein_id=WP_004213578.1;transl_table=11 NZ_CP085479.1 RefSeq gene 38286 39578 . + . ID=gene-LI478_RS25325;Name=silB;gbkey=Gene;gene=silB;gene_biotype=protein_coding;locus_tag=LI478_RS25325 NZ_CP085479.1 Protein Homology CDS 38286 39578 . + 0 ID=cds-WP_004213579.1;Parent=gene-LI478_RS25325;Dbxref=Genbank:WP_004213579.1;Name=WP_004213579.1;gbkey=CDS;gene=silB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017146627.1;locus_tag=LI478_RS25325;product=Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB;protein_id=WP_004213579.1;transl_table=11 NZ_CP085479.1 RefSeq gene 39589 42735 . + . ID=gene-LI478_RS25330;Name=silA;gbkey=Gene;gene=silA;gene_biotype=protein_coding;locus_tag=LI478_RS25330 NZ_CP085479.1 Protein Homology CDS 39589 42735 . + 0 ID=cds-WP_004098958.1;Parent=gene-LI478_RS25330;Dbxref=Genbank:WP_004098958.1;Name=WP_004098958.1;gbkey=CDS;gene=silA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011711636.1;locus_tag=LI478_RS25330;product=Cu(+)/Ag(+) efflux RND transporter permease subunit SilA;protein_id=WP_004098958.1;transl_table=11 NZ_CP085479.1 RefSeq gene 42822 43262 . + . ID=gene-LI478_RS25335;Name=LI478_RS25335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25335 NZ_CP085479.1 Protein Homology CDS 42822 43262 . + 0 ID=cds-WP_000758228.1;Parent=gene-LI478_RS25335;Dbxref=Genbank:WP_000758228.1;Name=WP_000758228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002436620.1;locus_tag=LI478_RS25335;product=hypothetical protein;protein_id=WP_000758228.1;transl_table=11 NZ_CP085479.1 RefSeq gene 43389 45836 . + . ID=gene-LI478_RS25340;Name=silP;gbkey=Gene;gene=silP;gene_biotype=protein_coding;locus_tag=LI478_RS25340 NZ_CP085479.1 Protein Homology CDS 43389 45836 . + 0 ID=cds-WP_004098955.1;Parent=gene-LI478_RS25340;Dbxref=Genbank:WP_004098955.1;Name=WP_004098955.1;gbkey=CDS;gene=silP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008322814.1;locus_tag=LI478_RS25340;product=Ag(+)-translocating P-type ATPase SilP;protein_id=WP_004098955.1;transl_table=11 NZ_CP085479.1 RefSeq gene 45877 46074 . + . ID=gene-LI478_RS25345;Name=LI478_RS25345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25345 NZ_CP085479.1 Protein Homology CDS 45877 46074 . + 0 ID=cds-WP_000843497.1;Parent=gene-LI478_RS25345;Dbxref=Genbank:WP_000843497.1;Name=WP_000843497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000843499.1;locus_tag=LI478_RS25345;product=DUF2933 domain-containing protein;protein_id=WP_000843497.1;transl_table=11 NZ_CP085479.1 RefSeq gene 46108 46845 . - . ID=gene-LI478_RS25350;Name=LI478_RS25350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25350 NZ_CP085479.1 Protein Homology CDS 46108 46845 . - 0 ID=cds-WP_004118669.1;Parent=gene-LI478_RS25350;Dbxref=Genbank:WP_004118669.1;Name=WP_004118669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002436617.1;locus_tag=LI478_RS25350;product=peptidoglycan DD-metalloendopeptidase family protein;protein_id=WP_004118669.1;transl_table=11 NZ_CP085479.1 RefSeq gene 47134 47583 . - . ID=gene-LI478_RS25355;Name=LI478_RS25355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25355 NZ_CP085479.1 Protein Homology CDS 47134 47583 . - 0 ID=cds-WP_001023257.1;Parent=gene-LI478_RS25355;Dbxref=Genbank:WP_001023257.1;Name=WP_001023257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004388333.1;locus_tag=LI478_RS25355;product=copper resistance protein;protein_id=WP_001023257.1;transl_table=11 NZ_CP085479.1 RefSeq pseudogene 47817 49634 . + . ID=gene-LI478_RS25360;Name=pcoA;gbkey=Gene;gene=pcoA;gene_biotype=pseudogene;locus_tag=LI478_RS25360;pseudo=true NZ_CP085479.1 Protein Homology CDS 47817 49634 . + 0 ID=cds-LI478_RS25360;Parent=gene-LI478_RS25360;Note=internal stop;gbkey=CDS;gene=pcoA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001480786.1;locus_tag=LI478_RS25360;product=multicopper oxidase PcoA;pseudo=true;transl_table=11 NZ_CP085479.1 RefSeq gene 49640 50530 . + . ID=gene-LI478_RS25365;Name=pcoB;gbkey=Gene;gene=pcoB;gene_biotype=protein_coding;locus_tag=LI478_RS25365 NZ_CP085479.1 Protein Homology CDS 49640 50530 . + 0 ID=cds-WP_029884201.1;Parent=gene-LI478_RS25365;Dbxref=Genbank:WP_029884201.1;Name=WP_029884201.1;gbkey=CDS;gene=pcoB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001378118.1;locus_tag=LI478_RS25365;product=copper resistance outer membrane transporter PcoB;protein_id=WP_029884201.1;transl_table=11 NZ_CP085479.1 RefSeq gene 50570 50950 . + . ID=gene-LI478_RS25370;Name=pcoC;gbkey=Gene;gene=pcoC;gene_biotype=protein_coding;locus_tag=LI478_RS25370 NZ_CP085479.1 Protein Homology CDS 50570 50950 . + 0 ID=cds-WP_000025662.1;Parent=gene-LI478_RS25370;Dbxref=Genbank:WP_000025662.1;Name=WP_000025662.1;gbkey=CDS;gene=pcoC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004098941.1;locus_tag=LI478_RS25370;product=copper resistance system metallochaperone PcoC;protein_id=WP_000025662.1;transl_table=11 NZ_CP085479.1 RefSeq gene 50955 51884 . + . ID=gene-LI478_RS25375;Name=pcoD;gbkey=Gene;gene=pcoD;gene_biotype=protein_coding;locus_tag=LI478_RS25375 NZ_CP085479.1 Protein Homology CDS 50955 51884 . + 0 ID=cds-WP_004213583.1;Parent=gene-LI478_RS25375;Dbxref=Genbank:WP_004213583.1;Name=WP_004213583.1;gbkey=CDS;gene=pcoD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004098940.1;locus_tag=LI478_RS25375;product=copper resistance inner membrane protein PcoD;protein_id=WP_004213583.1;transl_table=11 NZ_CP085479.1 RefSeq gene 51939 52619 . + . ID=gene-LI478_RS25380;Name=pcoR;gbkey=Gene;gene=pcoR;gene_biotype=protein_coding;locus_tag=LI478_RS25380 NZ_CP085479.1 Protein Homology CDS 51939 52619 . + 0 ID=cds-WP_001188930.1;Parent=gene-LI478_RS25380;Dbxref=Genbank:WP_001188930.1;Name=WP_001188930.1;gbkey=CDS;gene=pcoR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020239536.1;locus_tag=LI478_RS25380;product=copper response regulator transcription factor PcoR;protein_id=WP_001188930.1;transl_table=11 NZ_CP085479.1 RefSeq gene 52616 54016 . + . ID=gene-LI478_RS25385;Name=pcoS;gbkey=Gene;gene=pcoS;gene_biotype=protein_coding;locus_tag=LI478_RS25385 NZ_CP085479.1 Protein Homology CDS 52616 54016 . + 0 ID=cds-WP_004152084.1;Parent=gene-LI478_RS25385;Dbxref=Genbank:WP_004152084.1;Name=WP_004152084.1;gbkey=CDS;gene=pcoS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001211179.1;locus_tag=LI478_RS25385;product=copper resistance membrane spanning protein PcoS;protein_id=WP_004152084.1;transl_table=11 NZ_CP085479.1 RefSeq gene 54312 54746 . - . ID=gene-LI478_RS25390;Name=cadR;gbkey=Gene;gene=cadR;gene_biotype=protein_coding;locus_tag=LI478_RS25390 NZ_CP085479.1 Protein Homology CDS 54312 54746 . - 0 ID=cds-WP_000405672.1;Parent=gene-LI478_RS25390;Dbxref=Genbank:WP_000405672.1;Name=WP_000405672.1;Ontology_term=GO:0045893,GO:0003677,GO:0003700,GO:0046872;gbkey=CDS;gene=cadR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,metal ion binding|0046872||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008063281.1;locus_tag=LI478_RS25390;product=Cd(II)/Pb(II)-responsive transcriptional regulator;protein_id=WP_000405672.1;transl_table=11 NZ_CP085479.1 RefSeq gene 54832 57237 . + . ID=gene-LI478_RS25395;Name=LI478_RS25395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25395 NZ_CP085479.1 Protein Homology CDS 54832 57237 . + 0 ID=cds-WP_004213585.1;Parent=gene-LI478_RS25395;Dbxref=Genbank:WP_004213585.1;Name=WP_004213585.1;Ontology_term=GO:0042625;gbkey=CDS;go_function=ATPase-coupled ion transmembrane transporter activity|0042625||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008434970.1;locus_tag=LI478_RS25395;product=heavy metal translocating P-type ATPase;protein_id=WP_004213585.1;transl_table=11 NZ_CP085479.1 RefSeq gene 57234 58310 . + . ID=gene-LI478_RS25400;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=LI478_RS25400 NZ_CP085479.1 Protein Homology CDS 57234 58310 . + 0 ID=cds-WP_000118563.1;Parent=gene-LI478_RS25400;Dbxref=Genbank:WP_000118563.1;Name=WP_000118563.1;Ontology_term=GO:0006508,GO:0009306,GO:0004190,GO:0005886;gbkey=CDS;gene=lspA;go_component=plasma membrane|0005886||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=proteolysis|0006508||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000118563.1;locus_tag=LI478_RS25400;product=signal peptidase II;protein_id=WP_000118563.1;transl_table=11 NZ_CP085479.1 RefSeq gene 58440 58997 . + . ID=gene-LI478_RS25405;Name=LI478_RS25405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25405 NZ_CP085479.1 Protein Homology CDS 58440 58997 . + 0 ID=cds-WP_004213590.1;Parent=gene-LI478_RS25405;Dbxref=Genbank:WP_004213590.1;Name=WP_004213590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016236504.1;locus_tag=LI478_RS25405;product=recombinase family protein;protein_id=WP_004213590.1;transl_table=11 NZ_CP085479.1 RefSeq gene 59000 61969 . + . ID=gene-LI478_RS25410;Name=LI478_RS25410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25410 NZ_CP085479.1 Protein Homology CDS 59000 61969 . + 0 ID=cds-WP_004213592.1;Parent=gene-LI478_RS25410;Dbxref=Genbank:WP_004213592.1;Name=WP_004213592.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_021138877.1;locus_tag=LI478_RS25410;product=Tn3 family transposase;protein_id=WP_004213592.1;transl_table=11 NZ_CP085479.1 RefSeq gene 62011 62505 . + . ID=gene-LI478_RS25415;Name=LI478_RS25415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25415 NZ_CP085479.1 Protein Homology CDS 62011 62505 . + 0 ID=cds-WP_004213594.1;Parent=gene-LI478_RS25415;Dbxref=Genbank:WP_004213594.1;Name=WP_004213594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020805591.1;locus_tag=LI478_RS25415;product=hypothetical protein;protein_id=WP_004213594.1;transl_table=11 NZ_CP085479.1 RefSeq gene 62566 62769 . + . ID=gene-LI478_RS25420;Name=LI478_RS25420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25420 NZ_CP085479.1 Protein Homology CDS 62566 62769 . + 0 ID=cds-WP_004213596.1;Parent=gene-LI478_RS25420;Dbxref=Genbank:WP_004213596.1;Name=WP_004213596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208622.1;locus_tag=LI478_RS25420;product=HHA domain-containing protein;protein_id=WP_004213596.1;transl_table=11 NZ_CP085479.1 RefSeq gene 62783 63013 . + . ID=gene-LI478_RS25425;Name=LI478_RS25425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25425 NZ_CP085479.1 Protein Homology CDS 62783 63013 . + 0 ID=cds-WP_004213598.1;Parent=gene-LI478_RS25425;Dbxref=Genbank:WP_004213598.1;Name=WP_004213598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019725034.1;locus_tag=LI478_RS25425;product=hypothetical protein;protein_id=WP_004213598.1;transl_table=11 NZ_CP085479.1 RefSeq gene 63208 63474 . + . ID=gene-LI478_RS25430;Name=LI478_RS25430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25430 NZ_CP085479.1 Protein Homology CDS 63208 63474 . + 0 ID=cds-WP_004213599.1;Parent=gene-LI478_RS25430;Dbxref=Genbank:WP_004213599.1;Name=WP_004213599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004213599.1;locus_tag=LI478_RS25430;product=DUF1778 domain-containing protein;protein_id=WP_004213599.1;transl_table=11 NZ_CP085479.1 RefSeq gene 63462 63944 . + . ID=gene-LI478_RS25435;Name=LI478_RS25435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25435 NZ_CP085479.1 Protein Homology CDS 63462 63944 . + 0 ID=cds-WP_004098919.1;Parent=gene-LI478_RS25435;Dbxref=Genbank:WP_004098919.1;Name=WP_004098919.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012540079.1;locus_tag=LI478_RS25435;product=GNAT family N-acetyltransferase;protein_id=WP_004098919.1;transl_table=11 NZ_CP085479.1 RefSeq pseudogene 64365 65592 . + . ID=gene-LI478_RS25440;Name=LI478_RS25440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS25440;pseudo=true NZ_CP085479.1 Protein Homology CDS 64365 65592 . + 0 ID=cds-LI478_RS25440;Parent=gene-LI478_RS25440;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558215.1;locus_tag=LI478_RS25440;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP085479.1 RefSeq pseudogene 65588 65983 . - . ID=gene-LI478_RS25445;Name=LI478_RS25445;end_range=65983,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS25445;partial=true;pseudo=true;start_range=.,65588 NZ_CP085479.1 Protein Homology CDS 65588 65983 . - 0 ID=cds-LI478_RS25445;Parent=gene-LI478_RS25445;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0015074;end_range=65983,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010972061.1;locus_tag=LI478_RS25445;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,65588;transl_table=11 NZ_CP085479.1 RefSeq gene 66158 67180 . - . ID=gene-LI478_RS25450;Name=hemB;gbkey=Gene;gene=hemB;gene_biotype=protein_coding;locus_tag=LI478_RS25450 NZ_CP085479.1 Protein Homology CDS 66158 67180 . - 0 ID=cds-WP_004214536.1;Parent=gene-LI478_RS25450;Dbxref=Genbank:WP_004214536.1;Name=WP_004214536.1;Ontology_term=GO:0033014,GO:0003824,GO:0004655,GO:0046872;gbkey=CDS;gene=hemB;go_function=catalytic activity|0003824||IEA,porphobilinogen synthase activity|0004655||IEA,metal ion binding|0046872||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000022378.1;locus_tag=LI478_RS25450;product=porphobilinogen synthase;protein_id=WP_004214536.1;transl_table=11 NZ_CP085479.1 RefSeq gene 67244 68590 . - . ID=gene-LI478_RS25455;Name=LI478_RS25455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25455 NZ_CP085479.1 Protein Homology CDS 67244 68590 . - 0 ID=cds-WP_048333011.1;Parent=gene-LI478_RS25455;Dbxref=Genbank:WP_048333011.1;Name=WP_048333011.1;Ontology_term=GO:0016812;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in cyclic amides|0016812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011154555.1;locus_tag=LI478_RS25455;product=dihydroorotase;protein_id=WP_048333011.1;transl_table=11 NZ_CP085479.1 RefSeq gene 68587 69438 . - . ID=gene-LI478_RS25460;Name=LI478_RS25460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25460 NZ_CP085479.1 Protein Homology CDS 68587 69438 . - 0 ID=cds-WP_004214538.1;Parent=gene-LI478_RS25460;Dbxref=Genbank:WP_004214538.1;Name=WP_004214538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004214538.1;locus_tag=LI478_RS25460;product=M14 family metallocarboxypeptidase;protein_id=WP_004214538.1;transl_table=11 NZ_CP085479.1 RefSeq pseudogene 69431 70192 . - . ID=gene-LI478_RS25465;Name=LI478_RS25465;end_range=70192,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS25465;partial=true;pseudo=true NZ_CP085479.1 Protein Homology CDS 69431 70192 . - 0 ID=cds-LI478_RS25465;Parent=gene-LI478_RS25465;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=70192,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001181760.1;locus_tag=LI478_RS25465;partial=true;product=threonine--tRNA ligase;pseudo=true;transl_table=11 NZ_CP085479.1 RefSeq pseudogene 70280 70432 . - . ID=gene-LI478_RS25470;Name=LI478_RS25470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS25470;partial=true;pseudo=true;start_range=.,70280 NZ_CP085479.1 Protein Homology CDS 70280 70432 . - 0 ID=cds-LI478_RS25470;Parent=gene-LI478_RS25470;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014839.2;locus_tag=LI478_RS25470;partial=true;product=TGS domain-containing protein;pseudo=true;start_range=.,70280;transl_table=11 NZ_CP085479.1 RefSeq gene 70862 71686 . + . ID=gene-LI478_RS25475;Name=LI478_RS25475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25475 NZ_CP085479.1 Protein Homology CDS 70862 71686 . + 0 ID=cds-WP_004214540.1;Parent=gene-LI478_RS25475;Dbxref=Genbank:WP_004214540.1;Name=WP_004214540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000709111.1;locus_tag=LI478_RS25475;product=DUF1460 domain-containing protein;protein_id=WP_004214540.1;transl_table=11 NZ_CP085479.1 RefSeq gene 71703 72569 . - . ID=gene-LI478_RS25480;Name=LI478_RS25480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25480 NZ_CP085479.1 Protein Homology CDS 71703 72569 . - 0 ID=cds-WP_011251271.1;Parent=gene-LI478_RS25480;Dbxref=Genbank:WP_011251271.1;Name=WP_011251271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001419903.1;locus_tag=LI478_RS25480;product=hypothetical protein;protein_id=WP_011251271.1;transl_table=11 NZ_CP085479.1 RefSeq gene 72699 73259 . - . ID=gene-LI478_RS25485;Name=LI478_RS25485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25485 NZ_CP085479.1 Protein Homology CDS 72699 73259 . - 0 ID=cds-WP_004214543.1;Parent=gene-LI478_RS25485;Dbxref=Genbank:WP_004214543.1;Name=WP_004214543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007193149.1;locus_tag=LI478_RS25485;product=carbonate dehydratase;protein_id=WP_004214543.1;transl_table=11 NZ_CP085479.1 RefSeq gene 73249 74184 . - . ID=gene-LI478_RS25490;Name=folE2;gbkey=Gene;gene=folE2;gene_biotype=protein_coding;locus_tag=LI478_RS25490 NZ_CP085479.1 Protein Homology CDS 73249 74184 . - 0 ID=cds-WP_004214545.1;Parent=gene-LI478_RS25490;Dbxref=Genbank:WP_004214545.1;Name=WP_004214545.1;Ontology_term=GO:0035998,GO:0003933;gbkey=CDS;gene=folE2;go_function=GTP cyclohydrolase activity|0003933||IEA;go_process=7%2C8-dihydroneopterin 3'-triphosphate biosynthetic process|0035998||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016531967.1;locus_tag=LI478_RS25490;product=GTP cyclohydrolase FolE2;protein_id=WP_004214545.1;transl_table=11 NZ_CP085479.1 RefSeq gene 74248 74670 . - . ID=gene-LI478_RS25495;Name=dksA;gbkey=Gene;gene=dksA;gene_biotype=protein_coding;locus_tag=LI478_RS25495 NZ_CP085479.1 Protein Homology CDS 74248 74670 . - 0 ID=cds-WP_004214547.1;Parent=gene-LI478_RS25495;Dbxref=Genbank:WP_004214547.1;Name=WP_004214547.1;Ontology_term=GO:0006355,GO:0019899;gbkey=CDS;gene=dksA;go_function=enzyme binding|0019899||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004150576.1;locus_tag=LI478_RS25495;product=RNA polymerase-binding protein DksA;protein_id=WP_004214547.1;transl_table=11 NZ_CP085479.1 RefSeq gene 74741 75940 . - . ID=gene-LI478_RS25500;Name=LI478_RS25500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25500 NZ_CP085479.1 Protein Homology CDS 74741 75940 . - 0 ID=cds-WP_014599314.1;Parent=gene-LI478_RS25500;Dbxref=Genbank:WP_014599314.1;Name=WP_014599314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004902162.1;locus_tag=LI478_RS25500;product=GTP-binding protein;protein_id=WP_014599314.1;transl_table=11 NZ_CP085479.1 RefSeq gene 76038 76490 . + . ID=gene-LI478_RS25505;Name=LI478_RS25505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25505 NZ_CP085479.1 Protein Homology CDS 76038 76490 . + 0 ID=cds-WP_011251268.1;Parent=gene-LI478_RS25505;Dbxref=Genbank:WP_011251268.1;Name=WP_011251268.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000211298.1;locus_tag=LI478_RS25505;product=transcriptional repressor;protein_id=WP_011251268.1;transl_table=11 NZ_CP085479.1 RefSeq pseudogene 76570 77951 . + . ID=gene-LI478_RS25510;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=pseudogene;locus_tag=LI478_RS25510;pseudo=true NZ_CP085479.1 Protein Homology CDS 76570 77951 . + 0 ID=cds-LI478_RS25510;Parent=gene-LI478_RS25510;Note=frameshifted%3B internal stop;Ontology_term=GO:0006423,GO:0004817,GO:0005737;gbkey=CDS;gene=cysS;go_component=cytoplasm|0005737||IEA;go_function=cysteine-tRNA ligase activity|0004817||IEA;go_process=cysteinyl-tRNA aminoacylation|0006423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011094674.1;locus_tag=LI478_RS25510;product=cysteine--tRNA ligase;pseudo=true;transl_table=11 NZ_CP085479.1 RefSeq gene 78022 79152 . + . ID=gene-LI478_RS25515;Name=LI478_RS25515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25515 NZ_CP085479.1 Protein Homology CDS 78022 79152 . + 0 ID=cds-WP_004212832.1;Parent=gene-LI478_RS25515;Dbxref=Genbank:WP_004212832.1;Name=WP_004212832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004212832.1;locus_tag=LI478_RS25515;product=NAD(P)-binding domain-containing protein;protein_id=WP_004212832.1;transl_table=11 NZ_CP085479.1 RefSeq gene 79163 80299 . + . ID=gene-LI478_RS25520;Name=LI478_RS25520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25520 NZ_CP085479.1 Protein Homology CDS 79163 80299 . + 0 ID=cds-WP_227394186.1;Parent=gene-LI478_RS25520;Dbxref=Genbank:WP_227394186.1;Name=WP_227394186.1;Ontology_term=GO:0005525;gbkey=CDS;go_function=GTP binding|0005525||IEA;inference=COORDINATES: protein motif:HMM:NF014474.2;locus_tag=LI478_RS25520;product=50S ribosome-binding GTPase;protein_id=WP_227394186.1;transl_table=11 NZ_CP085479.1 RefSeq gene 80344 81312 . - . ID=gene-LI478_RS25525;Name=LI478_RS25525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25525 NZ_CP085479.1 Protein Homology CDS 80344 81312 . - 0 ID=cds-WP_004225014.1-13;Parent=gene-LI478_RS25525;Dbxref=Genbank:WP_004225014.1;Name=WP_004225014.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=LI478_RS25525;product=IS5 family transposase;protein_id=WP_004225014.1;transl_table=11 NZ_CP085479.1 RefSeq gene 81350 82636 . + . ID=gene-LI478_RS25530;Name=LI478_RS25530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25530 NZ_CP085479.1 Protein Homology CDS 81350 82636 . + 0 ID=cds-WP_227394187.1;Parent=gene-LI478_RS25530;Dbxref=Genbank:WP_227394187.1;Name=WP_227394187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000081622.1;locus_tag=LI478_RS25530;product=PP2C family serine/threonine-protein phosphatase;protein_id=WP_227394187.1;transl_table=11 NZ_CP085479.1 RefSeq gene 82664 84163 . + . ID=gene-LI478_RS25535;Name=LI478_RS25535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25535 NZ_CP085479.1 Protein Homology CDS 82664 84163 . + 0 ID=cds-WP_048333030.1;Parent=gene-LI478_RS25535;Dbxref=Genbank:WP_048333030.1;Name=WP_048333030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303502.1;locus_tag=LI478_RS25535;product=kinase;protein_id=WP_048333030.1;transl_table=11 NZ_CP085479.1 RefSeq gene 84295 84942 . - . ID=gene-LI478_RS25540;Name=LI478_RS25540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25540 NZ_CP085479.1 Protein Homology CDS 84295 84942 . - 0 ID=cds-WP_014386537.1;Parent=gene-LI478_RS25540;Dbxref=Genbank:WP_014386537.1;Name=WP_014386537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014386537.1;locus_tag=LI478_RS25540;product=EcsC family protein;protein_id=WP_014386537.1;transl_table=11 NZ_CP085479.1 RefSeq gene 84969 85724 . - . ID=gene-LI478_RS25545;Name=LI478_RS25545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25545 NZ_CP085479.1 Protein Homology CDS 84969 85724 . - 0 ID=cds-WP_004902235.1;Parent=gene-LI478_RS25545;Dbxref=Genbank:WP_004902235.1;Name=WP_004902235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004902235.1;locus_tag=LI478_RS25545;product=DUF2971 domain-containing protein;protein_id=WP_004902235.1;transl_table=11 NZ_CP085479.1 RefSeq gene 85825 86217 . - . ID=gene-LI478_RS25550;Name=LI478_RS25550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25550 NZ_CP085479.1 GeneMarkS-2+ CDS 85825 86217 . - 0 ID=cds-WP_032442757.1;Parent=gene-LI478_RS25550;Dbxref=Genbank:WP_032442757.1;Name=WP_032442757.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LI478_RS25550;product=hypothetical protein;protein_id=WP_032442757.1;transl_table=11 NZ_CP085479.1 RefSeq gene 86322 86861 . - . ID=gene-LI478_RS25555;Name=LI478_RS25555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25555 NZ_CP085479.1 Protein Homology CDS 86322 86861 . - 0 ID=cds-WP_004902239.1;Parent=gene-LI478_RS25555;Dbxref=Genbank:WP_004902239.1;Name=WP_004902239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004902239.1;locus_tag=LI478_RS25555;product=hypothetical protein;protein_id=WP_004902239.1;transl_table=11 NZ_CP085479.1 RefSeq gene 87896 88378 . - . ID=gene-LI478_RS25560;Name=LI478_RS25560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25560 NZ_CP085479.1 Protein Homology CDS 87896 88378 . - 0 ID=cds-WP_048333033.1;Parent=gene-LI478_RS25560;Dbxref=Genbank:WP_048333033.1;Name=WP_048333033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017146621.1;locus_tag=LI478_RS25560;product=GNAT family N-acetyltransferase;protein_id=WP_048333033.1;transl_table=11 NZ_CP085479.1 RefSeq gene 88369 88647 . - . ID=gene-LI478_RS25565;Name=LI478_RS25565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25565 NZ_CP085479.1 Protein Homology CDS 88369 88647 . - 0 ID=cds-WP_004902250.1;Parent=gene-LI478_RS25565;Dbxref=Genbank:WP_004902250.1;Name=WP_004902250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312288.2;locus_tag=LI478_RS25565;product=DUF1778 domain-containing protein;protein_id=WP_004902250.1;transl_table=11 NZ_CP085479.1 RefSeq gene 88769 88981 . - . ID=gene-LI478_RS25570;Name=LI478_RS25570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25570 NZ_CP085479.1 Protein Homology CDS 88769 88981 . - 0 ID=cds-WP_016946198.1;Parent=gene-LI478_RS25570;Dbxref=Genbank:WP_016946198.1;Name=WP_016946198.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004210286.1;locus_tag=LI478_RS25570;product=hypothetical protein;protein_id=WP_016946198.1;transl_table=11 NZ_CP085479.1 RefSeq gene 89089 89430 . - . ID=gene-LI478_RS25575;Name=LI478_RS25575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25575 NZ_CP085479.1 Protein Homology CDS 89089 89430 . - 0 ID=cds-WP_032437747.1;Parent=gene-LI478_RS25575;Dbxref=Genbank:WP_032437747.1;Name=WP_032437747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004902257.1;locus_tag=LI478_RS25575;product=hypothetical protein;protein_id=WP_032437747.1;transl_table=11 NZ_CP085479.1 RefSeq gene 90336 90650 . + . ID=gene-LI478_RS25580;Name=LI478_RS25580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25580 NZ_CP085479.1 Protein Homology CDS 90336 90650 . + 0 ID=cds-WP_023288299.1;Parent=gene-LI478_RS25580;Dbxref=Genbank:WP_023288299.1;Name=WP_023288299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004118069.1;locus_tag=LI478_RS25580;product=hypothetical protein;protein_id=WP_023288299.1;transl_table=11 NZ_CP085479.1 RefSeq gene 90894 91376 . - . ID=gene-LI478_RS25585;Name=LI478_RS25585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25585 NZ_CP085479.1 Protein Homology CDS 90894 91376 . - 0 ID=cds-WP_172694439.1;Parent=gene-LI478_RS25585;Dbxref=Genbank:WP_172694439.1;Name=WP_172694439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004118072.1;locus_tag=LI478_RS25585;product=hypothetical protein;protein_id=WP_172694439.1;transl_table=11 NZ_CP085479.1 RefSeq gene 93150 93806 . - . ID=gene-LI478_RS25590;Name=LI478_RS25590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25590 NZ_CP085479.1 Protein Homology CDS 93150 93806 . - 0 ID=cds-WP_023287188.1;Parent=gene-LI478_RS25590;Dbxref=Genbank:WP_023287188.1;Name=WP_023287188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004026561.1;locus_tag=LI478_RS25590;product=hypothetical protein;protein_id=WP_023287188.1;transl_table=11 NZ_CP085479.1 RefSeq gene 94642 95541 . - . ID=gene-LI478_RS25595;Name=LI478_RS25595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25595 NZ_CP085479.1 Protein Homology CDS 94642 95541 . - 0 ID=cds-WP_004026560.1;Parent=gene-LI478_RS25595;Dbxref=Genbank:WP_004026560.1;Name=WP_004026560.1;Ontology_term=GO:0006270,GO:0003887;gbkey=CDS;go_function=DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication initiation|0006270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004181746.1;locus_tag=LI478_RS25595;product=RepB family plasmid replication initiator protein;protein_id=WP_004026560.1;transl_table=11 NZ_CP085479.1 RefSeq gene 95862 96923 . - . ID=gene-LI478_RS25600;Name=LI478_RS25600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25600 NZ_CP085479.1 Protein Homology CDS 95862 96923 . - 0 ID=cds-WP_043875876.1;Parent=gene-LI478_RS25600;Dbxref=Genbank:WP_043875876.1;Name=WP_043875876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012540214.1;locus_tag=LI478_RS25600;product=hypothetical protein;protein_id=WP_043875876.1;transl_table=11 NZ_CP085479.1 RefSeq gene 97009 97263 . - . ID=gene-LI478_RS25605;Name=LI478_RS25605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25605 NZ_CP085479.1 Protein Homology CDS 97009 97263 . - 0 ID=cds-WP_004213836.1;Parent=gene-LI478_RS25605;Dbxref=Genbank:WP_004213836.1;Name=WP_004213836.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004186931.1;locus_tag=LI478_RS25605;product=Hha/YmoA family nucleoid-associated regulatory protein;protein_id=WP_004213836.1;transl_table=11 NZ_CP085479.1 RefSeq gene 97441 98577 . + . ID=gene-LI478_RS25610;Name=LI478_RS25610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25610 NZ_CP085479.1 Protein Homology CDS 97441 98577 . + 0 ID=cds-WP_004213833.1;Parent=gene-LI478_RS25610;Dbxref=Genbank:WP_004213833.1;Name=WP_004213833.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004117850.1;locus_tag=LI478_RS25610;product=tyrosine-type recombinase/integrase;protein_id=WP_004213833.1;transl_table=11 NZ_CP085479.1 RefSeq gene 98643 98960 . - . ID=gene-LI478_RS25615;Name=LI478_RS25615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25615 NZ_CP085479.1 Protein Homology CDS 98643 98960 . - 0 ID=cds-WP_004213829.1;Parent=gene-LI478_RS25615;Dbxref=Genbank:WP_004213829.1;Name=WP_004213829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004026552.1;locus_tag=LI478_RS25615;product=hypothetical protein;protein_id=WP_004213829.1;transl_table=11 NZ_CP085479.1 RefSeq gene 99112 99435 . - . ID=gene-LI478_RS25620;Name=LI478_RS25620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25620 NZ_CP085479.1 Protein Homology CDS 99112 99435 . - 0 ID=cds-WP_004197568.1;Parent=gene-LI478_RS25620;Dbxref=Genbank:WP_004197568.1;Name=WP_004197568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004117846.1;locus_tag=LI478_RS25620;product=hypothetical protein;protein_id=WP_004197568.1;transl_table=11 NZ_CP085479.1 RefSeq gene 99720 100190 . - . ID=gene-LI478_RS25625;Name=LI478_RS25625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25625 NZ_CP085479.1 GeneMarkS-2+ CDS 99720 100190 . - 0 ID=cds-WP_004902291.1;Parent=gene-LI478_RS25625;Dbxref=Genbank:WP_004902291.1;Name=WP_004902291.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LI478_RS25625;product=hypothetical protein;protein_id=WP_004902291.1;transl_table=11 NZ_CP085479.1 RefSeq gene 100187 101146 . - . ID=gene-LI478_RS25630;Name=LI478_RS25630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25630 NZ_CP085479.1 Protein Homology CDS 100187 101146 . - 0 ID=cds-WP_011154511.1;Parent=gene-LI478_RS25630;Dbxref=Genbank:WP_011154511.1;Name=WP_011154511.1;Ontology_term=GO:0006274,GO:0003677,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA;go_process=DNA replication termination|0006274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011251302.1;locus_tag=LI478_RS25630;product=DNA replication terminus site-binding protein;protein_id=WP_011154511.1;transl_table=11 NZ_CP085479.1 RefSeq gene 101189 101596 . - . ID=gene-LI478_RS25635;Name=LI478_RS25635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25635 NZ_CP085479.1 Protein Homology CDS 101189 101596 . - 0 ID=cds-WP_004186937.1;Parent=gene-LI478_RS25635;Dbxref=Genbank:WP_004186937.1;Name=WP_004186937.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004181761.1;locus_tag=LI478_RS25635;product=hypothetical protein;protein_id=WP_004186937.1;transl_table=11 NZ_CP085479.1 RefSeq gene 101606 102049 . - . ID=gene-LI478_RS25640;Name=LI478_RS25640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25640 NZ_CP085479.1 Protein Homology CDS 101606 102049 . - 0 ID=cds-WP_004213821.1;Parent=gene-LI478_RS25640;Dbxref=Genbank:WP_004213821.1;Name=WP_004213821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004213821.1;locus_tag=LI478_RS25640;product=hypothetical protein;protein_id=WP_004213821.1;transl_table=11 NZ_CP085479.1 RefSeq pseudogene 102070 103145 . - . ID=gene-LI478_RS25645;Name=LI478_RS25645;end_range=103145,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS25645;partial=true;pseudo=true NZ_CP085479.1 Protein Homology CDS 102070 103145 . - 0 ID=cds-LI478_RS25645;Parent=gene-LI478_RS25645;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;end_range=103145,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611434.1;locus_tag=LI478_RS25645;partial=true;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP085479.1 RefSeq gene 103313 104281 . + . ID=gene-LI478_RS25650;Name=LI478_RS25650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25650 NZ_CP085479.1 Protein Homology CDS 103313 104281 . + 0 ID=cds-WP_004213807.1;Parent=gene-LI478_RS25650;Dbxref=Genbank:WP_004213807.1;Name=WP_004213807.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003031967.1;locus_tag=LI478_RS25650;product=IS110 family transposase;protein_id=WP_004213807.1;transl_table=11 NZ_CP085479.1 RefSeq pseudogene 104300 104464 . - . ID=gene-LI478_RS25655;Name=LI478_RS25655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS25655;partial=true;pseudo=true;start_range=.,104300 NZ_CP085479.1 Protein Homology CDS 104300 104464 . - 0 ID=cds-LI478_RS25655;Parent=gene-LI478_RS25655;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612175.1;locus_tag=LI478_RS25655;partial=true;product=transposase;pseudo=true;start_range=.,104300;transl_table=11 NZ_CP085479.1 RefSeq gene 104550 106142 . - . ID=gene-LI478_RS25660;Name=LI478_RS25660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25660 NZ_CP085479.1 Protein Homology CDS 104550 106142 . - 0 ID=cds-WP_004902302.1;Parent=gene-LI478_RS25660;Dbxref=Genbank:WP_004902302.1;Name=WP_004902302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014839879.1;locus_tag=LI478_RS25660;product=IS66-like element ISKox1 family transposase;protein_id=WP_004902302.1;transl_table=11 NZ_CP085479.1 RefSeq gene 106173 106523 . - . ID=gene-LI478_RS25665;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=LI478_RS25665 NZ_CP085479.1 Protein Homology CDS 106173 106523 . - 0 ID=cds-WP_004189161.1;Parent=gene-LI478_RS25665;Dbxref=Genbank:WP_004189161.1;Name=WP_004189161.1;Note=TnpB%2C as the term is used for proteins encoded by IS66 family insertion elements%2C is considered an accessory protein%2C since TnpC%2C encoded by a neighboring gene%2C is a DDE family transposase.;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309365.1;locus_tag=LI478_RS25665;product=IS66 family insertion sequence element accessory protein TnpB;protein_id=WP_004189161.1;transl_table=11 NZ_CP085479.1 RefSeq gene 106520 106960 . - . ID=gene-LI478_RS25670;Name=LI478_RS25670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25670 NZ_CP085479.1 Protein Homology CDS 106520 106960 . - 0 ID=cds-WP_004215130.1;Parent=gene-LI478_RS25670;Dbxref=Genbank:WP_004215130.1;Name=WP_004215130.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003026046.1;locus_tag=LI478_RS25670;product=transposase;protein_id=WP_004215130.1;transl_table=11 NZ_CP085479.1 RefSeq pseudogene 107045 107339 . + . ID=gene-LI478_RS25675;Name=LI478_RS25675;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS25675;partial=true;pseudo=true;start_range=.,107045 NZ_CP085479.1 Protein Homology CDS 107045 107339 . + 0 ID=cds-LI478_RS25675;Parent=gene-LI478_RS25675;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004152715.1;locus_tag=LI478_RS25675;partial=true;product=DUF4113 domain-containing protein;pseudo=true;start_range=.,107045;transl_table=11 NZ_CP085479.1 RefSeq pseudogene 107418 107646 . + . ID=gene-LI478_RS25680;Name=LI478_RS25680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS25680;pseudo=true NZ_CP085479.1 Protein Homology CDS 107418 107646 . + 0 ID=cds-LI478_RS25680;Parent=gene-LI478_RS25680;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004118081.1;locus_tag=LI478_RS25680;product=type II toxin-antitoxin system Phd/YefM family antitoxin;pseudo=true;transl_table=11 NZ_CP085479.1 RefSeq gene 108288 109259 . - . ID=gene-LI478_RS25685;Name=LI478_RS25685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25685 NZ_CP085479.1 Protein Homology CDS 108288 109259 . - 0 ID=cds-WP_004117790.1;Parent=gene-LI478_RS25685;Dbxref=Genbank:WP_004117790.1;Name=WP_004117790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000817038.1;locus_tag=LI478_RS25685;product=ParB/RepB/Spo0J family plasmid partition protein;protein_id=WP_004117790.1;transl_table=11 NZ_CP085479.1 RefSeq gene 109259 110425 . - . ID=gene-LI478_RS25690;Name=sopA;gbkey=Gene;gene=sopA;gene_biotype=protein_coding;locus_tag=LI478_RS25690 NZ_CP085479.1 Protein Homology CDS 109259 110425 . - 0 ID=cds-WP_004211841.1;Parent=gene-LI478_RS25690;Dbxref=Genbank:WP_004211841.1;Name=WP_004211841.1;gbkey=CDS;gene=sopA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052640.1;locus_tag=LI478_RS25690;product=plasmid-partitioning protein SopA;protein_id=WP_004211841.1;transl_table=11 NZ_CP085479.1 RefSeq gene 111155 112165 . + . ID=gene-LI478_RS25695;Name=LI478_RS25695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25695 NZ_CP085479.1 Protein Homology CDS 111155 112165 . + 0 ID=cds-WP_004211839.1;Parent=gene-LI478_RS25695;Dbxref=Genbank:WP_004211839.1;Name=WP_004211839.1;Ontology_term=GO:0006270,GO:0003887;gbkey=CDS;go_function=DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication initiation|0006270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017900946.1;locus_tag=LI478_RS25695;product=RepB family plasmid replication initiator protein;protein_id=WP_004211839.1;transl_table=11 NZ_CP085479.1 RefSeq pseudogene 112987 113727 . - . ID=gene-LI478_RS25700;Name=LI478_RS25700;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS25700;pseudo=true NZ_CP085479.1 Protein Homology CDS 112987 113727 . - 0 ID=cds-LI478_RS25700;Parent=gene-LI478_RS25700;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012540156.1;locus_tag=LI478_RS25700;product=site-specific integrase;pseudo=true;transl_table=11 NZ_CP085479.1 RefSeq pseudogene 114075 114348 . + . ID=gene-LI478_RS25705;Name=LI478_RS25705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS25705;partial=true;pseudo=true;start_range=.,114075 NZ_CP085479.1 Protein Homology CDS 114075 114348 . + 0 ID=cds-LI478_RS25705;Parent=gene-LI478_RS25705;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611340.1;locus_tag=LI478_RS25705;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,114075;transl_table=11 NZ_CP085479.1 RefSeq gene 114485 115021 . - . ID=gene-LI478_RS25710;Name=LI478_RS25710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25710 NZ_CP085479.1 Protein Homology CDS 114485 115021 . - 0 ID=cds-WP_004211835.1;Parent=gene-LI478_RS25710;Dbxref=Genbank:WP_004211835.1;Name=WP_004211835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004117808.1;locus_tag=LI478_RS25710;product=hypothetical protein;protein_id=WP_004211835.1;transl_table=11 NZ_CP085479.1 RefSeq gene 115232 116300 . - . ID=gene-LI478_RS25715;Name=LI478_RS25715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25715 NZ_CP085479.1 Protein Homology CDS 116077 116300 . - 0 ID=cds-WP_223271235.1;Parent=gene-LI478_RS25715;Dbxref=Genbank:WP_223271235.1;Name=WP_223271235.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611505.1;locus_tag=LI478_RS25715;product=IS3 family transposase;protein_id=WP_223271235.1;transl_table=11 NZ_CP085479.1 Protein Homology CDS 115232 116078 . - 1 ID=cds-WP_223271235.1;Parent=gene-LI478_RS25715;Dbxref=Genbank:WP_223271235.1;Name=WP_223271235.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611505.1;locus_tag=LI478_RS25715;product=IS3 family transposase;protein_id=WP_223271235.1;transl_table=11 NZ_CP085479.1 RefSeq pseudogene 116753 117775 . + . ID=gene-LI478_RS25720;Name=istA;gbkey=Gene;gene=istA;gene_biotype=pseudogene;locus_tag=LI478_RS25720;pseudo=true NZ_CP085479.1 Protein Homology CDS 116753 117775 . + 0 ID=cds-LI478_RS25720;Parent=gene-LI478_RS25720;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000627495.1;locus_tag=LI478_RS25720;product=IS21 family transposase;pseudo=true;transl_table=11 NZ_CP085479.1 RefSeq gene 117772 118554 . + . ID=gene-LI478_RS25725;Name=istB;gbkey=Gene;gene=istB;gene_biotype=protein_coding;locus_tag=LI478_RS25725 NZ_CP085479.1 Protein Homology CDS 117772 118554 . + 0 ID=cds-WP_004214667.1;Parent=gene-LI478_RS25725;Dbxref=Genbank:WP_004214667.1;Name=WP_004214667.1;gbkey=CDS;gene=istB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001531258.1;locus_tag=LI478_RS25725;product=IS21-like element ISSen3 family helper ATPase IstB;protein_id=WP_004214667.1;transl_table=11 NZ_CP085479.1 RefSeq pseudogene 118620 119269 . - . ID=gene-LI478_RS25730;Name=LI478_RS25730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS25730;partial=true;pseudo=true;start_range=.,118620 NZ_CP085479.1 Protein Homology CDS 118620 119269 . - 0 ID=cds-LI478_RS25730;Parent=gene-LI478_RS25730;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611474.1;locus_tag=LI478_RS25730;partial=true;product=transposase;pseudo=true;start_range=.,118620;transl_table=11 NZ_CP085479.1 RefSeq gene 119338 119865 . - . ID=gene-LI478_RS25735;Name=LI478_RS25735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25735 NZ_CP085479.1 Protein Homology CDS 119338 119865 . - 0 ID=cds-WP_004902332.1;Parent=gene-LI478_RS25735;Dbxref=Genbank:WP_004902332.1;Name=WP_004902332.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020387.2;locus_tag=LI478_RS25735;product=RES domain-containing protein;protein_id=WP_004902332.1;transl_table=11 NZ_CP085479.1 RefSeq gene 119825 119947 . - . ID=gene-LI478_RS26485;Name=LI478_RS26485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS26485 NZ_CP085479.1 Protein Homology CDS 119825 119947 . - 0 ID=cds-WP_226323909.1;Parent=gene-LI478_RS26485;Dbxref=Genbank:WP_226323909.1;Name=WP_226323909.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020387.2;locus_tag=LI478_RS26485;product=RES domain-containing protein;protein_id=WP_226323909.1;transl_table=11 NZ_CP085479.1 RefSeq gene 119908 120408 . - . ID=gene-LI478_RS25740;Name=LI478_RS25740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25740 NZ_CP085479.1 Protein Homology CDS 119908 120408 . - 0 ID=cds-WP_004214674.1;Parent=gene-LI478_RS25740;Dbxref=Genbank:WP_004214674.1;Name=WP_004214674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004902335.1;locus_tag=LI478_RS25740;product=hypothetical protein;protein_id=WP_004214674.1;transl_table=11 NZ_CP085479.1 RefSeq gene 120581 120904 . - . ID=gene-LI478_RS25745;Name=LI478_RS25745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25745 NZ_CP085479.1 Protein Homology CDS 120581 120904 . - 0 ID=cds-WP_004902338.1;Parent=gene-LI478_RS25745;Dbxref=Genbank:WP_004902338.1;Name=WP_004902338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004902338.1;locus_tag=LI478_RS25745;product=hypothetical protein;protein_id=WP_004902338.1;transl_table=11 NZ_CP085479.1 RefSeq gene 120901 121338 . - . ID=gene-LI478_RS25750;Name=LI478_RS25750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25750 NZ_CP085479.1 Protein Homology CDS 120901 121338 . - 0 ID=cds-WP_004902343.1;Parent=gene-LI478_RS25750;Dbxref=Genbank:WP_004902343.1;Name=WP_004902343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000843282.1;locus_tag=LI478_RS25750;product=hypothetical protein;protein_id=WP_004902343.1;transl_table=11 NZ_CP085479.1 RefSeq gene 121338 122369 . - . ID=gene-LI478_RS25755;Name=LI478_RS25755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25755 NZ_CP085479.1 Protein Homology CDS 121338 122369 . - 0 ID=cds-WP_004902347.1;Parent=gene-LI478_RS25755;Dbxref=Genbank:WP_004902347.1;Name=WP_004902347.1;Ontology_term=GO:0000910,GO:0007059,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=cytokinesis|0000910||IEA,chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004902347.1;locus_tag=LI478_RS25755;product=ParB/RepB/Spo0J family partition protein;protein_id=WP_004902347.1;transl_table=11 NZ_CP085479.1 RefSeq gene 122369 123235 . - . ID=gene-LI478_RS25760;Name=LI478_RS25760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25760 NZ_CP085479.1 Protein Homology CDS 122369 123235 . - 0 ID=cds-WP_011251296.1;Parent=gene-LI478_RS25760;Dbxref=Genbank:WP_011251296.1;Name=WP_011251296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016247547.1;locus_tag=LI478_RS25760;product=AAA family ATPase;protein_id=WP_011251296.1;transl_table=11 NZ_CP085479.1 RefSeq pseudogene 123763 123894 . - . ID=gene-LI478_RS25765;Name=LI478_RS25765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS25765;partial=true;pseudo=true;start_range=.,123763 NZ_CP085479.1 Protein Homology CDS 123763 123894 . - 0 ID=cds-LI478_RS25765;Parent=gene-LI478_RS25765;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004902354.1;locus_tag=LI478_RS25765;partial=true;product=molecular chaperone DnaJ;pseudo=true;start_range=.,123763;transl_table=11 NZ_CP085479.1 RefSeq gene 124083 124340 . + . ID=gene-LI478_RS25770;Name=LI478_RS25770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25770 NZ_CP085479.1 GeneMarkS-2+ CDS 124083 124340 . + 0 ID=cds-WP_048333007.1;Parent=gene-LI478_RS25770;Dbxref=Genbank:WP_048333007.1;Name=WP_048333007.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LI478_RS25770;product=hypothetical protein;protein_id=WP_048333007.1;transl_table=11 NZ_CP085479.1 RefSeq gene 124358 125326 . + . ID=gene-LI478_RS25775;Name=LI478_RS25775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25775 NZ_CP085479.1 Protein Homology CDS 124358 125326 . + 0 ID=cds-WP_004225014.1-14;Parent=gene-LI478_RS25775;Dbxref=Genbank:WP_004225014.1;Name=WP_004225014.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=LI478_RS25775;product=IS5 family transposase;protein_id=WP_004225014.1;transl_table=11 NZ_CP085479.1 RefSeq gene 125698 126021 . + . ID=gene-LI478_RS25780;Name=LI478_RS25780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25780 NZ_CP085479.1 Protein Homology CDS 125698 126021 . + 0 ID=cds-WP_004902375.1;Parent=gene-LI478_RS25780;Dbxref=Genbank:WP_004902375.1;Name=WP_004902375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004902375.1;locus_tag=LI478_RS25780;product=hypothetical protein;protein_id=WP_004902375.1;transl_table=11 NZ_CP085479.1 RefSeq pseudogene 126170 126858 . + . ID=gene-LI478_RS25785;Name=LI478_RS25785;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS25785;pseudo=true NZ_CP085479.1 Protein Homology CDS 126170 126858 . + 0 ID=cds-LI478_RS25785;Parent=gene-LI478_RS25785;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477181.1;locus_tag=LI478_RS25785;product=IS1 family transposase;pseudo=true;transl_table=11 NZ_CP085479.1 RefSeq pseudogene 126869 127135 . + . ID=gene-LI478_RS25790;Name=LI478_RS25790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS25790;partial=true;pseudo=true;start_range=.,126869 NZ_CP085479.1 Protein Homology CDS 126869 127135 . + 0 ID=cds-LI478_RS25790;Parent=gene-LI478_RS25790;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012767745.1;locus_tag=LI478_RS25790;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,126869;transl_table=11 NZ_CP085479.1 RefSeq gene 127205 127858 . - . ID=gene-LI478_RS25795;Name=LI478_RS25795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25795 NZ_CP085479.1 Protein Homology CDS 127205 127858 . - 0 ID=cds-WP_023302796.1;Parent=gene-LI478_RS25795;Dbxref=Genbank:WP_023302796.1;Name=WP_023302796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011251259.1;locus_tag=LI478_RS25795;product=class I SAM-dependent methyltransferase;protein_id=WP_023302796.1;transl_table=11 NZ_CP085479.1 RefSeq gene 128401 129033 . + . ID=gene-LI478_RS25800;Name=rmpA;gbkey=Gene;gene=rmpA;gene_biotype=protein_coding;locus_tag=LI478_RS25800 NZ_CP085479.1 Protein Homology CDS 128401 129033 . + 0 ID=cds-WP_004213609.1;Parent=gene-LI478_RS25800;Dbxref=Genbank:WP_004213609.1;Name=WP_004213609.1;gbkey=CDS;gene=rmpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004213609.1;locus_tag=LI478_RS25800;product=mucoid phenotype regulator RmpA;protein_id=WP_004213609.1;transl_table=11 NZ_CP085479.1 RefSeq gene 129089 129211 . + . ID=gene-LI478_RS25805;Name=rmpD;gbkey=Gene;gene=rmpD;gene_biotype=protein_coding;locus_tag=LI478_RS25805 NZ_CP085479.1 Protein Homology CDS 129089 129211 . + 0 ID=cds-WP_213034833.1;Parent=gene-LI478_RS25805;Dbxref=Genbank:WP_213034833.1;Name=WP_213034833.1;gbkey=CDS;gene=rmpD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_213034833.1;locus_tag=LI478_RS25805;product=mucoid phenotype synthesis protein RmpD;protein_id=WP_213034833.1;transl_table=11 NZ_CP085479.1 RefSeq gene 129564 129965 . + . ID=gene-LI478_RS25810;Name=rmpC;gbkey=Gene;gene=rmpC;gene_biotype=protein_coding;locus_tag=LI478_RS25810 NZ_CP085479.1 Protein Homology CDS 129564 129965 . + 0 ID=cds-WP_214588034.1;Parent=gene-LI478_RS25810;Dbxref=Genbank:WP_214588034.1;Name=WP_214588034.1;gbkey=CDS;gene=rmpC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_213034832.1;locus_tag=LI478_RS25810;product=LuxR C-terminal-related transcriptional regulator;protein_id=WP_214588034.1;transl_table=11 NZ_CP085479.1 RefSeq gene 130038 130940 . + . ID=gene-LI478_RS25815;Name=LI478_RS25815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25815 NZ_CP085479.1 Protein Homology CDS 130038 130940 . + 0 ID=cds-WP_004213613.1;Parent=gene-LI478_RS25815;Dbxref=Genbank:WP_004213613.1;Name=WP_004213613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016529495.1;locus_tag=LI478_RS25815;product=DMT family transporter;protein_id=WP_004213613.1;transl_table=11 NZ_CP085479.1 RefSeq gene 131083 131304 . - . ID=gene-LI478_RS25820;Name=LI478_RS25820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25820 NZ_CP085479.1 Protein Homology CDS 131083 131304 . - 0 ID=cds-WP_004213615.1;Parent=gene-LI478_RS25820;Dbxref=Genbank:WP_004213615.1;Name=WP_004213615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004144043.1;locus_tag=LI478_RS25820;product=hypothetical protein;protein_id=WP_004213615.1;transl_table=11 NZ_CP085479.1 RefSeq gene 131366 133540 . - . ID=gene-LI478_RS25825;Name=iroN;gbkey=Gene;gene=iroN;gene_biotype=protein_coding;locus_tag=LI478_RS25825 NZ_CP085479.1 Protein Homology CDS 131366 133540 . - 0 ID=cds-WP_004213617.1;Parent=gene-LI478_RS25825;Dbxref=Genbank:WP_004213617.1;Name=WP_004213617.1;gbkey=CDS;gene=iroN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004902397.1;locus_tag=LI478_RS25825;product=siderophore salmochelin receptor IroN;protein_id=WP_004213617.1;transl_table=11 NZ_CP085479.1 RefSeq gene 134000 135229 . - . ID=gene-LI478_RS25830;Name=iroD;gbkey=Gene;gene=iroD;gene_biotype=protein_coding;locus_tag=LI478_RS25830 NZ_CP085479.1 Protein Homology CDS 134000 135229 . - 0 ID=cds-WP_004902400.1;Parent=gene-LI478_RS25830;Dbxref=Genbank:WP_004902400.1;Name=WP_004902400.1;gbkey=CDS;gene=iroD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015874982.1;locus_tag=LI478_RS25830;product=catecholate siderophore esterase IroD;protein_id=WP_004902400.1;transl_table=11 NZ_CP085479.1 RefSeq gene 135334 138978 . - . ID=gene-LI478_RS25835;Name=iroC;gbkey=Gene;gene=iroC;gene_biotype=protein_coding;locus_tag=LI478_RS25835 NZ_CP085479.1 Protein Homology CDS 135334 138978 . - 0 ID=cds-WP_023302798.1;Parent=gene-LI478_RS25835;Dbxref=Genbank:WP_023302798.1;Name=WP_023302798.1;gbkey=CDS;gene=iroC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011251260.1;locus_tag=LI478_RS25835;product=salmochelin/enterobactin export ABC transporter IroC;protein_id=WP_023302798.1;transl_table=11 NZ_CP085479.1 RefSeq gene 139121 140236 . - . ID=gene-LI478_RS25840;Name=iroB;gbkey=Gene;gene=iroB;gene_biotype=protein_coding;locus_tag=LI478_RS25840 NZ_CP085479.1 Protein Homology CDS 139121 140236 . - 0 ID=cds-WP_004213623.1;Parent=gene-LI478_RS25840;Dbxref=Genbank:WP_004213623.1;Name=WP_004213623.1;gbkey=CDS;gene=iroB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461700.1;locus_tag=LI478_RS25840;product=salmochelin biosynthesis C-glycosyltransferase IroB;protein_id=WP_004213623.1;transl_table=11 NZ_CP085479.1 RefSeq pseudogene 140333 140544 . - . ID=gene-LI478_RS25845;Name=LI478_RS25845;end_range=140544,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS25845;partial=true;pseudo=true;start_range=.,140333 NZ_CP085479.1 Protein Homology CDS 140333 140544 . - 0 ID=cds-LI478_RS25845;Parent=gene-LI478_RS25845;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=140544,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000219087.1;locus_tag=LI478_RS25845;partial=true;product=IS110 family transposase;pseudo=true;start_range=.,140333;transl_table=11 NZ_CP085479.1 RefSeq gene 140586 141230 . - . ID=gene-LI478_RS25850;Name=LI478_RS25850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25850 NZ_CP085479.1 Protein Homology CDS 140586 141230 . - 0 ID=cds-WP_004213626.1;Parent=gene-LI478_RS25850;Dbxref=Genbank:WP_004213626.1;Name=WP_004213626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309414.1;locus_tag=LI478_RS25850;product=ParB N-terminal domain-containing protein;protein_id=WP_004213626.1;transl_table=11 NZ_CP085479.1 RefSeq gene 141215 142447 . - . ID=gene-LI478_RS25855;Name=LI478_RS25855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25855 NZ_CP085479.1 Protein Homology CDS 141215 142447 . - 0 ID=cds-WP_004213628.1;Parent=gene-LI478_RS25855;Dbxref=Genbank:WP_004213628.1;Name=WP_004213628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001083460.1;locus_tag=LI478_RS25855;product=phosphoadenosine phosphosulfate reductase;protein_id=WP_004213628.1;transl_table=11 NZ_CP085479.1 RefSeq pseudogene 142590 142796 . - . ID=gene-LI478_RS25860;Name=LI478_RS25860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS25860;partial=true;pseudo=true;start_range=.,142590 NZ_CP085479.1 Protein Homology CDS 142590 142796 . - 0 ID=cds-LI478_RS25860;Parent=gene-LI478_RS25860;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000080195.1;locus_tag=LI478_RS25860;partial=true;product=IS66 family transposase;pseudo=true;start_range=.,142590;transl_table=11 NZ_CP085479.1 RefSeq pseudogene 142904 143110 . - . ID=gene-LI478_RS25865;Name=LI478_RS25865;end_range=143110,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS25865;partial=true;pseudo=true NZ_CP085479.1 Protein Homology CDS 142904 143110 . - 0 ID=cds-LI478_RS25865;Parent=gene-LI478_RS25865;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;end_range=143110,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558235.1;locus_tag=LI478_RS25865;partial=true;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP085479.1 RefSeq gene 143335 143856 . + . ID=gene-LI478_RS25870;Name=LI478_RS25870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25870 NZ_CP085479.1 Protein Homology CDS 143335 143856 . + 0 ID=cds-WP_004213635.1;Parent=gene-LI478_RS25870;Dbxref=Genbank:WP_004213635.1;Name=WP_004213635.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418713.1;locus_tag=LI478_RS25870;product=sigma-70 family RNA polymerase sigma factor;protein_id=WP_004213635.1;transl_table=11 NZ_CP085479.1 RefSeq pseudogene 143853 144806 . + . ID=gene-LI478_RS25875;Name=fecR;gbkey=Gene;gene=fecR;gene_biotype=pseudogene;locus_tag=LI478_RS25875;pseudo=true NZ_CP085479.1 Protein Homology CDS 143853 144806 . + 0 ID=cds-LI478_RS25875;Parent=gene-LI478_RS25875;Note=internal stop;gbkey=CDS;gene=fecR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418712.1;locus_tag=LI478_RS25875;product=fec operon regulator FecR;pseudo=true;transl_table=11 ##sequence-region NZ_CP085480.1 1 109308 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=573 NZ_CP085480.1 RefSeq region 1 109308 . + . ID=NZ_CP085480.1:1..109308;Dbxref=taxon:573;Is_circular=true;Name=p2;collected-by=Shanghai Jiao Tong University;collection-date=2015;country=China:Shanghai;gbkey=Src;genome=plasmid;isolation-source=blood;lat-lon=31.22337 N 121.49295 E;mol_type=genomic DNA;nat-host=Homo sapiens;plasmid-name=p2;strain=Kp1604 NZ_CP085480.1 RefSeq gene 1 1101 . + . ID=gene-LI478_RS25880;Name=LI478_RS25880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25880 NZ_CP085480.1 Protein Homology CDS 1 1101 . + 0 ID=cds-WP_032422994.1;Parent=gene-LI478_RS25880;Dbxref=Genbank:WP_032422994.1;Name=WP_032422994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220827.1;locus_tag=LI478_RS25880;product=site-specific integrase;protein_id=WP_032422994.1;transl_table=11 NZ_CP085480.1 RefSeq gene 1096 1476 . - . ID=gene-LI478_RS25885;Name=LI478_RS25885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25885 NZ_CP085480.1 Protein Homology CDS 1096 1476 . - 0 ID=cds-WP_014342091.1;Parent=gene-LI478_RS25885;Dbxref=Genbank:WP_014342091.1;Name=WP_014342091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220826.1;locus_tag=LI478_RS25885;product=transcriptional regulator;protein_id=WP_014342091.1;transl_table=11 NZ_CP085480.1 RefSeq gene 2079 4358 . + . ID=gene-LI478_RS25890;Name=LI478_RS25890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25890 NZ_CP085480.1 Protein Homology CDS 2079 4358 . + 0 ID=cds-WP_227394193.1;Parent=gene-LI478_RS25890;Dbxref=Genbank:WP_227394193.1;Name=WP_227394193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006812566.1;locus_tag=LI478_RS25890;product=porphyrin biosynthesis protein;protein_id=WP_227394193.1;transl_table=11 NZ_CP085480.1 RefSeq gene 4455 5687 . + . ID=gene-LI478_RS25895;Name=LI478_RS25895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25895 NZ_CP085480.1 Protein Homology CDS 4455 5687 . + 0 ID=cds-WP_019704545.1;Parent=gene-LI478_RS25895;Dbxref=Genbank:WP_019704545.1;Name=WP_019704545.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004110112.1;locus_tag=LI478_RS25895;product=AAA family ATPase;protein_id=WP_019704545.1;transl_table=11 NZ_CP085480.1 RefSeq pseudogene 5868 8195 . + . ID=gene-LI478_RS25900;Name=dnaE;end_range=8195,.;gbkey=Gene;gene=dnaE;gene_biotype=pseudogene;locus_tag=LI478_RS25900;partial=true;pseudo=true NZ_CP085480.1 Protein Homology CDS 5868 8195 . + 0 ID=cds-LI478_RS25900;Parent=gene-LI478_RS25900;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006260,GO:0003887,GO:0009360;end_range=8195,.;gbkey=CDS;gene=dnaE;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000645856.1;locus_tag=LI478_RS25900;partial=true;product=DNA polymerase III subunit alpha;pseudo=true;transl_table=11 NZ_CP085480.1 RefSeq gene 8234 8929 . + . ID=gene-LI478_RS25905;Name=LI478_RS25905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25905 NZ_CP085480.1 Protein Homology CDS 8234 8929 . + 0 ID=cds-WP_159121416.1;Parent=gene-LI478_RS25905;Dbxref=Genbank:WP_159121416.1;Name=WP_159121416.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019106.2;locus_tag=LI478_RS25905;product=NUMOD4 motif-containing HNH endonuclease;protein_id=WP_159121416.1;transl_table=11 NZ_CP085480.1 RefSeq pseudogene 8984 10120 . + . ID=gene-LI478_RS25910;Name=LI478_RS25910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS25910;partial=true;pseudo=true;start_range=.,8984 NZ_CP085480.1 Protein Homology CDS 8984 10120 . + 0 ID=cds-LI478_RS25910;Parent=gene-LI478_RS25910;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000645856.1;locus_tag=LI478_RS25910;partial=true;product=DNA polymerase III subunit alpha;pseudo=true;start_range=.,8984;transl_table=11 NZ_CP085480.1 RefSeq gene 10135 10560 . + . ID=gene-LI478_RS25915;Name=LI478_RS25915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25915 NZ_CP085480.1 GeneMarkS-2+ CDS 10135 10560 . + 0 ID=cds-WP_021313789.1;Parent=gene-LI478_RS25915;Dbxref=Genbank:WP_021313789.1;Name=WP_021313789.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LI478_RS25915;product=hypothetical protein;protein_id=WP_021313789.1;transl_table=11 NZ_CP085480.1 RefSeq gene 10761 11180 . + . ID=gene-LI478_RS25920;Name=LI478_RS25920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25920 NZ_CP085480.1 Protein Homology CDS 10761 11180 . + 0 ID=cds-WP_021313788.1;Parent=gene-LI478_RS25920;Dbxref=Genbank:WP_021313788.1;Name=WP_021313788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019704547.1;locus_tag=LI478_RS25920;product=hypothetical protein;protein_id=WP_021313788.1;transl_table=11 NZ_CP085480.1 RefSeq gene 11191 11490 . + . ID=gene-LI478_RS25925;Name=LI478_RS25925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25925 NZ_CP085480.1 GeneMarkS-2+ CDS 11191 11490 . + 0 ID=cds-WP_021313787.1;Parent=gene-LI478_RS25925;Dbxref=Genbank:WP_021313787.1;Name=WP_021313787.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LI478_RS25925;product=hypothetical protein;protein_id=WP_021313787.1;transl_table=11 NZ_CP085480.1 RefSeq gene 11638 12069 . + . ID=gene-LI478_RS25930;Name=LI478_RS25930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25930 NZ_CP085480.1 Protein Homology CDS 11638 12069 . + 0 ID=cds-WP_064164595.1;Parent=gene-LI478_RS25930;Dbxref=Genbank:WP_064164595.1;Name=WP_064164595.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220816.1;locus_tag=LI478_RS25930;product=hypothetical protein;protein_id=WP_064164595.1;transl_table=11 NZ_CP085480.1 RefSeq gene 12189 13193 . + . ID=gene-LI478_RS25935;Name=LI478_RS25935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25935 NZ_CP085480.1 Protein Homology CDS 12189 13193 . + 0 ID=cds-WP_227394194.1;Parent=gene-LI478_RS25935;Dbxref=Genbank:WP_227394194.1;Name=WP_227394194.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220815.1;locus_tag=LI478_RS25935;product=regulator;protein_id=WP_227394194.1;transl_table=11 NZ_CP085480.1 RefSeq gene 13254 14198 . + . ID=gene-LI478_RS25940;Name=LI478_RS25940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25940 NZ_CP085480.1 Protein Homology CDS 13254 14198 . + 0 ID=cds-WP_227394195.1;Parent=gene-LI478_RS25940;Dbxref=Genbank:WP_227394195.1;Name=WP_227394195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220814.1;locus_tag=LI478_RS25940;product=exonuclease;protein_id=WP_227394195.1;transl_table=11 NZ_CP085480.1 RefSeq gene 14198 14464 . + . ID=gene-LI478_RS25945;Name=LI478_RS25945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25945 NZ_CP085480.1 GeneMarkS-2+ CDS 14198 14464 . + 0 ID=cds-WP_019704549.1;Parent=gene-LI478_RS25945;Dbxref=Genbank:WP_019704549.1;Name=WP_019704549.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LI478_RS25945;product=hypothetical protein;protein_id=WP_019704549.1;transl_table=11 NZ_CP085480.1 RefSeq gene 14467 15543 . + . ID=gene-LI478_RS25950;Name=LI478_RS25950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25950 NZ_CP085480.1 Protein Homology CDS 14467 15543 . + 0 ID=cds-WP_019704550.1;Parent=gene-LI478_RS25950;Dbxref=Genbank:WP_019704550.1;Name=WP_019704550.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012381.2;locus_tag=LI478_RS25950;product=recombinase;protein_id=WP_019704550.1;transl_table=11 NZ_CP085480.1 RefSeq gene 15714 15890 . + . ID=gene-LI478_RS25955;Name=LI478_RS25955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25955 NZ_CP085480.1 GeneMarkS-2+ CDS 15714 15890 . + 0 ID=cds-WP_014342076.1;Parent=gene-LI478_RS25955;Dbxref=Genbank:WP_014342076.1;Name=WP_014342076.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LI478_RS25955;product=hypothetical protein;protein_id=WP_014342076.1;transl_table=11 NZ_CP085480.1 RefSeq gene 16253 16588 . + . ID=gene-LI478_RS25960;Name=LI478_RS25960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25960 NZ_CP085480.1 Protein Homology CDS 16253 16588 . + 0 ID=cds-WP_032423093.1;Parent=gene-LI478_RS25960;Dbxref=Genbank:WP_032423093.1;Name=WP_032423093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002404714.1;locus_tag=LI478_RS25960;product=hypothetical protein;protein_id=WP_032423093.1;transl_table=11 NZ_CP085480.1 RefSeq gene 16588 16800 . + . ID=gene-LI478_RS25965;Name=LI478_RS25965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25965 NZ_CP085480.1 Protein Homology CDS 16588 16800 . + 0 ID=cds-WP_032423092.1;Parent=gene-LI478_RS25965;Dbxref=Genbank:WP_032423092.1;Name=WP_032423092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220809.1;locus_tag=LI478_RS25965;product=hypothetical protein;protein_id=WP_032423092.1;transl_table=11 NZ_CP085480.1 RefSeq gene 17231 18448 . - . ID=gene-LI478_RS25970;Name=LI478_RS25970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25970 NZ_CP085480.1 Protein Homology CDS 17231 18448 . - 0 ID=cds-WP_072201189.1;Parent=gene-LI478_RS25970;Dbxref=Genbank:WP_072201189.1;Name=WP_072201189.1;Ontology_term=GO:0006270,GO:0003887;gbkey=CDS;go_function=DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication initiation|0006270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220808.1;locus_tag=LI478_RS25970;product=RepB family plasmid replication initiator protein;protein_id=WP_072201189.1;transl_table=11 NZ_CP085480.1 RefSeq gene 18649 19293 . + . ID=gene-LI478_RS25975;Name=LI478_RS25975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25975 NZ_CP085480.1 Protein Homology CDS 18649 19293 . + 0 ID=cds-WP_032423052.1;Parent=gene-LI478_RS25975;Dbxref=Genbank:WP_032423052.1;Name=WP_032423052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220948.1;locus_tag=LI478_RS25975;product=hypothetical protein;protein_id=WP_032423052.1;transl_table=11 NZ_CP085480.1 RefSeq gene 19849 20253 . - . ID=gene-LI478_RS25980;Name=LI478_RS25980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25980 NZ_CP085480.1 GeneMarkS-2+ CDS 19849 20253 . - 0 ID=cds-WP_052238302.1;Parent=gene-LI478_RS25980;Dbxref=Genbank:WP_052238302.1;Name=WP_052238302.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LI478_RS25980;product=hypothetical protein;protein_id=WP_052238302.1;transl_table=11 NZ_CP085480.1 RefSeq gene 20782 21867 . + . ID=gene-LI478_RS25985;Name=LI478_RS25985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25985 NZ_CP085480.1 Protein Homology CDS 20782 21867 . + 0 ID=cds-WP_047065810.1;Parent=gene-LI478_RS25985;Dbxref=Genbank:WP_047065810.1;Name=WP_047065810.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220943.1;locus_tag=LI478_RS25985;product=metallophosphoesterase;protein_id=WP_047065810.1;transl_table=11 NZ_CP085480.1 RefSeq gene 21867 22100 . + . ID=gene-LI478_RS25990;Name=LI478_RS25990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25990 NZ_CP085480.1 Protein Homology CDS 21867 22100 . + 0 ID=cds-WP_072196416.1;Parent=gene-LI478_RS25990;Dbxref=Genbank:WP_072196416.1;Name=WP_072196416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220942.1;locus_tag=LI478_RS25990;product=hypothetical protein;protein_id=WP_072196416.1;transl_table=11 NZ_CP085480.1 RefSeq gene 22097 24013 . + . ID=gene-LI478_RS25995;Name=LI478_RS25995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS25995 NZ_CP085480.1 Protein Homology CDS 22097 24013 . + 0 ID=cds-WP_227394196.1;Parent=gene-LI478_RS25995;Dbxref=Genbank:WP_227394196.1;Name=WP_227394196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016051677.1;locus_tag=LI478_RS25995;product=AAA family ATPase;protein_id=WP_227394196.1;transl_table=11 NZ_CP085480.1 RefSeq gene 24039 24749 . + . ID=gene-LI478_RS26000;Name=LI478_RS26000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS26000 NZ_CP085480.1 Protein Homology CDS 24039 24749 . + 0 ID=cds-WP_227394205.1;Parent=gene-LI478_RS26000;Dbxref=Genbank:WP_227394205.1;Name=WP_227394205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220939.1;locus_tag=LI478_RS26000;product=hypothetical protein;protein_id=WP_227394205.1;transl_table=11 NZ_CP085480.1 RefSeq gene 24759 25328 . + . ID=gene-LI478_RS26005;Name=LI478_RS26005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS26005 NZ_CP085480.1 Protein Homology CDS 24759 25328 . + 0 ID=cds-WP_227394197.1;Parent=gene-LI478_RS26005;Dbxref=Genbank:WP_227394197.1;Name=WP_227394197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220938.1;locus_tag=LI478_RS26005;product=hypothetical protein;protein_id=WP_227394197.1;transl_table=11 NZ_CP085480.1 RefSeq gene 25404 27707 . + . ID=gene-LI478_RS26010;Name=nrdA;gbkey=Gene;gene=nrdA;gene_biotype=protein_coding;locus_tag=LI478_RS26010 NZ_CP085480.1 Protein Homology CDS 25404 27707 . + 0 ID=cds-WP_227394198.1;Parent=gene-LI478_RS26010;Dbxref=Genbank:WP_227394198.1;Name=WP_227394198.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129392.1;locus_tag=LI478_RS26010;product=ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_227394198.1;transl_table=11 NZ_CP085480.1 RefSeq gene 27838 28980 . + . ID=gene-LI478_RS26015;Name=nrdB;gbkey=Gene;gene=nrdB;gene_biotype=protein_coding;locus_tag=LI478_RS26015 NZ_CP085480.1 Protein Homology CDS 27838 28980 . + 0 ID=cds-WP_227394199.1;Parent=gene-LI478_RS26015;Dbxref=Genbank:WP_227394199.1;Name=WP_227394199.1;Ontology_term=GO:0009263,GO:0016491;gbkey=CDS;gene=nrdB;go_function=oxidoreductase activity|0016491||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220936.1;locus_tag=LI478_RS26015;product=ribonucleotide-diphosphate reductase subunit beta;protein_id=WP_227394199.1;transl_table=11 NZ_CP085480.1 RefSeq gene 29058 29933 . + . ID=gene-LI478_RS26020;Name=LI478_RS26020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS26020 NZ_CP085480.1 Protein Homology CDS 29058 29933 . + 0 ID=cds-WP_094310242.1;Parent=gene-LI478_RS26020;Dbxref=Genbank:WP_094310242.1;Name=WP_094310242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220935.1;locus_tag=LI478_RS26020;product=nucleoside triphosphate pyrophosphohydrolase family protein;protein_id=WP_094310242.1;transl_table=11 NZ_CP085480.1 RefSeq gene 30127 31230 . + . ID=gene-LI478_RS26025;Name=LI478_RS26025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS26025 NZ_CP085480.1 Protein Homology CDS 30127 31230 . + 0 ID=cds-WP_023279500.1;Parent=gene-LI478_RS26025;Dbxref=Genbank:WP_023279500.1;Name=WP_023279500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220934.1;locus_tag=LI478_RS26025;product=thymidylate synthase;protein_id=WP_023279500.1;transl_table=11 NZ_CP085480.1 RefSeq gene 31250 31645 . + . ID=gene-LI478_RS26030;Name=LI478_RS26030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS26030 NZ_CP085480.1 Protein Homology CDS 31250 31645 . + 0 ID=cds-WP_072196937.1;Parent=gene-LI478_RS26030;Dbxref=Genbank:WP_072196937.1;Name=WP_072196937.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220933.1;locus_tag=LI478_RS26030;product=hypothetical protein;protein_id=WP_072196937.1;transl_table=11 NZ_CP085480.1 RefSeq gene 31642 32118 . + . ID=gene-LI478_RS26035;Name=LI478_RS26035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS26035 NZ_CP085480.1 Protein Homology CDS 31642 32118 . + 0 ID=cds-WP_032440507.1;Parent=gene-LI478_RS26035;Dbxref=Genbank:WP_032440507.1;Name=WP_032440507.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012413.2;locus_tag=LI478_RS26035;product=dihydrofolate reductase;protein_id=WP_032440507.1;transl_table=11 NZ_CP085480.1 RefSeq gene 32118 32762 . + . ID=gene-LI478_RS26040;Name=LI478_RS26040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS26040 NZ_CP085480.1 Protein Homology CDS 32118 32762 . + 0 ID=cds-WP_048333207.1;Parent=gene-LI478_RS26040;Dbxref=Genbank:WP_048333207.1;Name=WP_048333207.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024911.2;locus_tag=LI478_RS26040;product=AAA family ATPase;protein_id=WP_048333207.1;transl_table=11 NZ_CP085480.1 RefSeq gene 32826 33245 . + . ID=gene-LI478_RS26045;Name=LI478_RS26045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS26045 NZ_CP085480.1 GeneMarkS-2+ CDS 32826 33245 . + 0 ID=cds-WP_023279504.1;Parent=gene-LI478_RS26045;Dbxref=Genbank:WP_023279504.1;Name=WP_023279504.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LI478_RS26045;product=hypothetical protein;protein_id=WP_023279504.1;transl_table=11 NZ_CP085480.1 RefSeq gene 33255 33812 . + . ID=gene-LI478_RS26050;Name=LI478_RS26050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS26050 NZ_CP085480.1 Protein Homology CDS 33255 33812 . + 0 ID=cds-WP_014342174.1;Parent=gene-LI478_RS26050;Dbxref=Genbank:WP_014342174.1;Name=WP_014342174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220929.1;locus_tag=LI478_RS26050;product=3'-5' exonuclease;protein_id=WP_014342174.1;transl_table=11 NZ_CP085480.1 RefSeq gene 33938 34771 . + . ID=gene-LI478_RS26055;Name=LI478_RS26055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS26055 NZ_CP085480.1 Protein Homology CDS 33938 34771 . + 0 ID=cds-WP_069346264.1;Parent=gene-LI478_RS26055;Dbxref=Genbank:WP_069346264.1;Name=WP_069346264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220928.1;locus_tag=LI478_RS26055;product=hypothetical protein;protein_id=WP_069346264.1;transl_table=11 NZ_CP085480.1 RefSeq gene 34956 35549 . + . ID=gene-LI478_RS26060;Name=LI478_RS26060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS26060 NZ_CP085480.1 Protein Homology CDS 34956 35549 . + 0 ID=cds-WP_023279507.1;Parent=gene-LI478_RS26060;Dbxref=Genbank:WP_023279507.1;Name=WP_023279507.1;Ontology_term=GO:0009007;gbkey=CDS;go_function=site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220927.1;locus_tag=LI478_RS26060;product=phage N-6-adenine-methyltransferase;protein_id=WP_023279507.1;transl_table=11 NZ_CP085480.1 RefSeq gene 35747 35968 . + . ID=gene-LI478_RS26065;Name=LI478_RS26065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS26065 NZ_CP085480.1 Protein Homology CDS 35747 35968 . + 0 ID=cds-WP_032734168.1;Parent=gene-LI478_RS26065;Dbxref=Genbank:WP_032734168.1;Name=WP_032734168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220926.1;locus_tag=LI478_RS26065;product=hypothetical protein;protein_id=WP_032734168.1;transl_table=11 NZ_CP085480.1 RefSeq gene 36553 37152 . + . ID=gene-LI478_RS26070;Name=rnhA;gbkey=Gene;gene=rnhA;gene_biotype=protein_coding;locus_tag=LI478_RS26070 NZ_CP085480.1 Protein Homology CDS 36553 37152 . + 0 ID=cds-WP_227394200.1;Parent=gene-LI478_RS26070;Dbxref=Genbank:WP_227394200.1;Name=WP_227394200.1;Ontology_term=GO:0003676,GO:0004523;gbkey=CDS;gene=rnhA;go_function=nucleic acid binding|0003676||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006812546.1;locus_tag=LI478_RS26070;product=ribonuclease HI;protein_id=WP_227394200.1;transl_table=11 NZ_CP085480.1 RefSeq gene 37298 37837 . + . ID=gene-LI478_RS26075;Name=LI478_RS26075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS26075 NZ_CP085480.1 Protein Homology CDS 37298 37837 . + 0 ID=cds-WP_227394201.1;Parent=gene-LI478_RS26075;Dbxref=Genbank:WP_227394201.1;Name=WP_227394201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004109944.1;locus_tag=LI478_RS26075;product=hypothetical protein;protein_id=WP_227394201.1;transl_table=11 NZ_CP085480.1 RefSeq gene 38138 38563 . + . ID=gene-LI478_RS26080;Name=LI478_RS26080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS26080 NZ_CP085480.1 Protein Homology CDS 38138 38563 . + 0 ID=cds-WP_019704567.1;Parent=gene-LI478_RS26080;Dbxref=Genbank:WP_019704567.1;Name=WP_019704567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007901009.1;locus_tag=LI478_RS26080;product=tellurite/colicin resistance protein;protein_id=WP_019704567.1;transl_table=11 NZ_CP085480.1 RefSeq gene 38563 38718 . + . ID=gene-LI478_RS26085;Name=LI478_RS26085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS26085 NZ_CP085480.1 Protein Homology CDS 38563 38718 . + 0 ID=cds-WP_227394202.1;Parent=gene-LI478_RS26085;Dbxref=Genbank:WP_227394202.1;Name=WP_227394202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220922.1;locus_tag=LI478_RS26085;product=DUF3927 family protein;protein_id=WP_227394202.1;transl_table=11 NZ_CP085480.1 RefSeq gene 38846 39424 . + . ID=gene-LI478_RS26090;Name=LI478_RS26090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS26090 NZ_CP085480.1 Protein Homology CDS 38846 39424 . + 0 ID=cds-WP_227394203.1;Parent=gene-LI478_RS26090;Dbxref=Genbank:WP_227394203.1;Name=WP_227394203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220921.1;locus_tag=LI478_RS26090;product=hypothetical protein;protein_id=WP_227394203.1;transl_table=11 NZ_CP085480.1 RefSeq gene 39553 39768 . + . ID=gene-LI478_RS26095;Name=LI478_RS26095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS26095 NZ_CP085480.1 GeneMarkS-2+ CDS 39553 39768 . + 0 ID=cds-WP_014342165.1;Parent=gene-LI478_RS26095;Dbxref=Genbank:WP_014342165.1;Name=WP_014342165.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LI478_RS26095;product=restriction endonuclease subunit M;protein_id=WP_014342165.1;transl_table=11 NZ_CP085480.1 RefSeq gene 39830 42946 . - . ID=gene-LI478_RS26100;Name=LI478_RS26100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS26100 NZ_CP085480.1 Protein Homology CDS 39830 42946 . - 0 ID=cds-WP_227394204.1;Parent=gene-LI478_RS26100;Dbxref=Genbank:WP_227394204.1;Name=WP_227394204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001764166.1;locus_tag=LI478_RS26100;product=HsdR family type I site-specific deoxyribonuclease;protein_id=WP_227394204.1;transl_table=11 NZ_CP085480.1 RefSeq gene 43063 44211 . - . ID=gene-LI478_RS26105;Name=LI478_RS26105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS26105 NZ_CP085480.1 Protein Homology CDS 43063 44211 . - 0 ID=cds-WP_071556251.1;Parent=gene-LI478_RS26105;Dbxref=Genbank:WP_071556251.1;Name=WP_071556251.1;Ontology_term=GO:0006304,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014620609.1;locus_tag=LI478_RS26105;product=restriction endonuclease subunit S;protein_id=WP_071556251.1;transl_table=11 NZ_CP085480.1 RefSeq gene 44208 45764 . - . ID=gene-LI478_RS26110;Name=LI478_RS26110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS26110 NZ_CP085480.1 Protein Homology CDS 44208 45764 . - 0 ID=cds-WP_064152272.1;Parent=gene-LI478_RS26110;Dbxref=Genbank:WP_064152272.1;Name=WP_064152272.1;Ontology_term=GO:0006306,GO:0009307,GO:0009007,GO:0015666;gbkey=CDS;go_function=site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA,restriction endodeoxyribonuclease activity|0015666||IEA;go_process=DNA methylation|0006306||IEA,DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220915.1;locus_tag=LI478_RS26110;product=type I restriction-modification system subunit M;protein_id=WP_064152272.1;transl_table=11 NZ_CP085480.1 RefSeq gene 45968 47833 . - . ID=gene-LI478_RS26115;Name=LI478_RS26115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS26115 NZ_CP085480.1 Protein Homology CDS 45968 47833 . - 0 ID=cds-WP_191736313.1;Parent=gene-LI478_RS26115;Dbxref=Genbank:WP_191736313.1;Name=WP_191736313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000918684.1;locus_tag=LI478_RS26115;product=DUF262 domain-containing protein;protein_id=WP_191736313.1;transl_table=11 NZ_CP085480.1 RefSeq gene 49710 49928 . + . ID=gene-LI478_RS26120;Name=LI478_RS26120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS26120 NZ_CP085480.1 GeneMarkS-2+ CDS 49710 49928 . + 0 ID=cds-WP_019704577.1;Parent=gene-LI478_RS26120;Dbxref=Genbank:WP_019704577.1;Name=WP_019704577.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LI478_RS26120;product=hypothetical protein;protein_id=WP_019704577.1;transl_table=11 NZ_CP085480.1 RefSeq gene 49941 50153 . + . ID=gene-LI478_RS26125;Name=LI478_RS26125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS26125 NZ_CP085480.1 Protein Homology CDS 49941 50153 . + 0 ID=cds-WP_023279445.1;Parent=gene-LI478_RS26125;Dbxref=Genbank:WP_023279445.1;Name=WP_023279445.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220910.1;locus_tag=LI478_RS26125;product=hypothetical protein;protein_id=WP_023279445.1;transl_table=11 NZ_CP085480.1 RefSeq gene 50302 50601 . + . ID=gene-LI478_RS26130;Name=LI478_RS26130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS26130 NZ_CP085480.1 Protein Homology CDS 50302 50601 . + 0 ID=cds-WP_072199357.1;Parent=gene-LI478_RS26130;Dbxref=Genbank:WP_072199357.1;Name=WP_072199357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220909.1;locus_tag=LI478_RS26130;product=hypothetical protein;protein_id=WP_072199357.1;transl_table=11 NZ_CP085480.1 RefSeq gene 50721 51128 . + . ID=gene-LI478_RS26135;Name=LI478_RS26135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS26135 NZ_CP085480.1 GeneMarkS-2+ CDS 50721 51128 . + 0 ID=cds-WP_032443590.1;Parent=gene-LI478_RS26135;Dbxref=Genbank:WP_032443590.1;Name=WP_032443590.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LI478_RS26135;product=hypothetical protein;protein_id=WP_032443590.1;transl_table=11 NZ_CP085480.1 RefSeq gene 51257 51631 . + . ID=gene-LI478_RS26140;Name=LI478_RS26140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS26140 NZ_CP085480.1 Protein Homology CDS 51257 51631 . + 0 ID=cds-WP_021313142.1;Parent=gene-LI478_RS26140;Dbxref=Genbank:WP_021313142.1;Name=WP_021313142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000522000.1;locus_tag=LI478_RS26140;product=hypothetical protein;protein_id=WP_021313142.1;transl_table=11 NZ_CP085480.1 RefSeq gene 51634 51915 . + . ID=gene-LI478_RS26145;Name=LI478_RS26145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS26145 NZ_CP085480.1 Protein Homology CDS 51634 51915 . + 0 ID=cds-WP_064483922.1;Parent=gene-LI478_RS26145;Dbxref=Genbank:WP_064483922.1;Name=WP_064483922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016051708.1;locus_tag=LI478_RS26145;product=hypothetical protein;protein_id=WP_064483922.1;transl_table=11 NZ_CP085480.1 RefSeq gene 52121 52603 . + . ID=gene-LI478_RS26150;Name=LI478_RS26150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS26150 NZ_CP085480.1 Protein Homology CDS 52121 52603 . + 0 ID=cds-WP_042935000.1;Parent=gene-LI478_RS26150;Dbxref=Genbank:WP_042935000.1;Name=WP_042935000.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220905.1;locus_tag=LI478_RS26150;product=hypothetical protein;protein_id=WP_042935000.1;transl_table=11 NZ_CP085480.1 RefSeq gene 53196 53399 . - . ID=gene-LI478_RS26155;Name=LI478_RS26155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS26155 NZ_CP085480.1 Protein Homology CDS 53196 53399 . - 0 ID=cds-WP_004109904.1;Parent=gene-LI478_RS26155;Dbxref=Genbank:WP_004109904.1;Name=WP_004109904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220904.1;locus_tag=LI478_RS26155;product=hypothetical protein;protein_id=WP_004109904.1;transl_table=11 NZ_CP085480.1 RefSeq gene 53450 54100 . - . ID=gene-LI478_RS26160;Name=LI478_RS26160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS26160 NZ_CP085480.1 Protein Homology CDS 53450 54100 . - 0 ID=cds-WP_004109892.1;Parent=gene-LI478_RS26160;Dbxref=Genbank:WP_004109892.1;Name=WP_004109892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220903.1;locus_tag=LI478_RS26160;product=hypothetical protein;protein_id=WP_004109892.1;transl_table=11 NZ_CP085480.1 RefSeq gene 54734 55264 . - . ID=gene-LI478_RS26165;Name=LI478_RS26165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS26165 NZ_CP085480.1 Protein Homology CDS 54734 55264 . - 0 ID=cds-WP_014342147.1;Parent=gene-LI478_RS26165;Dbxref=Genbank:WP_014342147.1;Name=WP_014342147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220901.1;locus_tag=LI478_RS26165;product=transcriptional regulator;protein_id=WP_014342147.1;transl_table=11 NZ_CP085480.1 RefSeq gene 55420 55857 . + . ID=gene-LI478_RS26170;Name=LI478_RS26170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS26170 NZ_CP085480.1 GeneMarkS-2+ CDS 55420 55857 . + 0 ID=cds-WP_019704582.1;Parent=gene-LI478_RS26170;Dbxref=Genbank:WP_019704582.1;Name=WP_019704582.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LI478_RS26170;product=hypothetical protein;protein_id=WP_019704582.1;transl_table=11 NZ_CP085480.1 RefSeq gene 55908 56183 . - . ID=gene-LI478_RS26175;Name=LI478_RS26175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS26175 NZ_CP085480.1 Protein Homology CDS 55908 56183 . - 0 ID=cds-WP_014342145.1;Parent=gene-LI478_RS26175;Dbxref=Genbank:WP_014342145.1;Name=WP_014342145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220899.1;locus_tag=LI478_RS26175;product=hypothetical protein;protein_id=WP_014342145.1;transl_table=11 NZ_CP085480.1 RefSeq gene 56186 57745 . - . ID=gene-LI478_RS26180;Name=LI478_RS26180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS26180 NZ_CP085480.1 Protein Homology CDS 56186 57745 . - 0 ID=cds-WP_073579060.1;Parent=gene-LI478_RS26180;Dbxref=Genbank:WP_073579060.1;Name=WP_073579060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220898.1;locus_tag=LI478_RS26180;product=DEAD/DEAH box helicase;protein_id=WP_073579060.1;transl_table=11 NZ_CP085480.1 RefSeq gene 57805 58509 . + . ID=gene-LI478_RS26185;Name=LI478_RS26185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS26185 NZ_CP085480.1 Protein Homology CDS 57805 58509 . + 0 ID=cds-WP_050484892.1;Parent=gene-LI478_RS26185;Dbxref=Genbank:WP_050484892.1;Name=WP_050484892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220897.1;locus_tag=LI478_RS26185;product=ParB N-terminal domain-containing protein;protein_id=WP_050484892.1;transl_table=11 NZ_CP085480.1 RefSeq gene 58509 59177 . + . ID=gene-LI478_RS26190;Name=LI478_RS26190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS26190 NZ_CP085480.1 Protein Homology CDS 58509 59177 . + 0 ID=cds-WP_014342142.1;Parent=gene-LI478_RS26190;Dbxref=Genbank:WP_014342142.1;Name=WP_014342142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220896.1;locus_tag=LI478_RS26190;product=ParB N-terminal domain-containing protein;protein_id=WP_014342142.1;transl_table=11 NZ_CP085480.1 RefSeq gene 59174 59812 . + . ID=gene-LI478_RS26195;Name=LI478_RS26195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS26195 NZ_CP085480.1 Protein Homology CDS 59174 59812 . + 0 ID=cds-WP_019704584.1;Parent=gene-LI478_RS26195;Dbxref=Genbank:WP_019704584.1;Name=WP_019704584.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000049674.1;locus_tag=LI478_RS26195;product=ATP-binding cassette domain-containing protein;protein_id=WP_019704584.1;transl_table=11 NZ_CP085480.1 RefSeq gene 59805 60059 . + . ID=gene-LI478_RS26200;Name=LI478_RS26200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS26200 NZ_CP085480.1 Protein Homology CDS 59805 60059 . + 0 ID=cds-WP_227394189.1;Parent=gene-LI478_RS26200;Dbxref=Genbank:WP_227394189.1;Name=WP_227394189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220893.1;locus_tag=LI478_RS26200;product=hypothetical protein;protein_id=WP_227394189.1;transl_table=11 NZ_CP085480.1 RefSeq gene 60065 60955 . + . ID=gene-LI478_RS26205;Name=LI478_RS26205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS26205 NZ_CP085480.1 Protein Homology CDS 60065 60955 . + 0 ID=cds-WP_004109872.1;Parent=gene-LI478_RS26205;Dbxref=Genbank:WP_004109872.1;Name=WP_004109872.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220892.1;locus_tag=LI478_RS26205;product=hypothetical protein;protein_id=WP_004109872.1;transl_table=11 NZ_CP085480.1 RefSeq gene 60965 61231 . + . ID=gene-LI478_RS26210;Name=LI478_RS26210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS26210 NZ_CP085480.1 Protein Homology CDS 60965 61231 . + 0 ID=cds-WP_004109869.1;Parent=gene-LI478_RS26210;Dbxref=Genbank:WP_004109869.1;Name=WP_004109869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220891.1;locus_tag=LI478_RS26210;product=hypothetical protein;protein_id=WP_004109869.1;transl_table=11 NZ_CP085480.1 RefSeq gene 61407 62048 . + . ID=gene-LI478_RS26215;Name=LI478_RS26215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS26215 NZ_CP085480.1 Protein Homology CDS 61407 62048 . + 0 ID=cds-WP_004109866.1;Parent=gene-LI478_RS26215;Dbxref=Genbank:WP_004109866.1;Name=WP_004109866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220890.1;locus_tag=LI478_RS26215;product=DNA-binding protein;protein_id=WP_004109866.1;transl_table=11 NZ_CP085480.1 RefSeq gene 62051 63307 . + . ID=gene-LI478_RS26220;Name=LI478_RS26220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS26220 NZ_CP085480.1 Protein Homology CDS 62051 63307 . + 0 ID=cds-WP_004109863.1;Parent=gene-LI478_RS26220;Dbxref=Genbank:WP_004109863.1;Name=WP_004109863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220889.1;locus_tag=LI478_RS26220;product=phage terminase large subunit;protein_id=WP_004109863.1;transl_table=11 NZ_CP085480.1 RefSeq gene 63340 64914 . + . ID=gene-LI478_RS26225;Name=LI478_RS26225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS26225 NZ_CP085480.1 Protein Homology CDS 63340 64914 . + 0 ID=cds-WP_019704587.1;Parent=gene-LI478_RS26225;Dbxref=Genbank:WP_019704587.1;Name=WP_019704587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000423989.1;locus_tag=LI478_RS26225;product=phage portal protein;protein_id=WP_019704587.1;transl_table=11 NZ_CP085480.1 RefSeq gene 64937 65836 . + . ID=gene-LI478_RS26230;Name=LI478_RS26230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS26230 NZ_CP085480.1 Protein Homology CDS 64937 65836 . + 0 ID=cds-WP_094310220.1;Parent=gene-LI478_RS26230;Dbxref=Genbank:WP_094310220.1;Name=WP_094310220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220886.1;locus_tag=LI478_RS26230;product=hypothetical protein;protein_id=WP_094310220.1;transl_table=11 NZ_CP085480.1 RefSeq gene 65863 66741 . + . ID=gene-LI478_RS26235;Name=LI478_RS26235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS26235 NZ_CP085480.1 Protein Homology CDS 65863 66741 . + 0 ID=cds-WP_004109857.1;Parent=gene-LI478_RS26235;Dbxref=Genbank:WP_004109857.1;Name=WP_004109857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220885.1;locus_tag=LI478_RS26235;product=hypothetical protein;protein_id=WP_004109857.1;transl_table=11 NZ_CP085480.1 RefSeq gene 66820 67248 . + . ID=gene-LI478_RS26240;Name=LI478_RS26240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS26240 NZ_CP085480.1 Protein Homology CDS 66820 67248 . + 0 ID=cds-WP_047065788.1;Parent=gene-LI478_RS26240;Dbxref=Genbank:WP_047065788.1;Name=WP_047065788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211783.1;locus_tag=LI478_RS26240;product=Ig-like domain-containing protein;protein_id=WP_047065788.1;transl_table=11 NZ_CP085480.1 RefSeq gene 67296 67730 . + . ID=gene-LI478_RS26245;Name=LI478_RS26245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS26245 NZ_CP085480.1 Protein Homology CDS 67296 67730 . + 0 ID=cds-WP_023279433.1;Parent=gene-LI478_RS26245;Dbxref=Genbank:WP_023279433.1;Name=WP_023279433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006812512.1;locus_tag=LI478_RS26245;product=hypothetical protein;protein_id=WP_023279433.1;transl_table=11 NZ_CP085480.1 RefSeq gene 67730 68563 . + . ID=gene-LI478_RS26250;Name=LI478_RS26250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS26250 NZ_CP085480.1 Protein Homology CDS 67730 68563 . + 0 ID=cds-WP_021313128.1;Parent=gene-LI478_RS26250;Dbxref=Genbank:WP_021313128.1;Name=WP_021313128.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220881.1;locus_tag=LI478_RS26250;product=hypothetical protein;protein_id=WP_021313128.1;transl_table=11 NZ_CP085480.1 RefSeq gene 68661 69005 . + . ID=gene-LI478_RS26255;Name=LI478_RS26255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS26255 NZ_CP085480.1 Protein Homology CDS 68661 69005 . + 0 ID=cds-WP_021313127.1;Parent=gene-LI478_RS26255;Dbxref=Genbank:WP_021313127.1;Name=WP_021313127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220880.1;locus_tag=LI478_RS26255;product=hypothetical protein;protein_id=WP_021313127.1;transl_table=11 NZ_CP085480.1 RefSeq gene 68996 69469 . + . ID=gene-LI478_RS26260;Name=LI478_RS26260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS26260 NZ_CP085480.1 Protein Homology CDS 68996 69469 . + 0 ID=cds-WP_039817692.1;Parent=gene-LI478_RS26260;Dbxref=Genbank:WP_039817692.1;Name=WP_039817692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220879.1;locus_tag=LI478_RS26260;product=hypothetical protein;protein_id=WP_039817692.1;transl_table=11 NZ_CP085480.1 RefSeq gene 69471 69863 . + . ID=gene-LI478_RS26265;Name=LI478_RS26265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS26265 NZ_CP085480.1 Protein Homology CDS 69471 69863 . + 0 ID=cds-WP_032423013.1;Parent=gene-LI478_RS26265;Dbxref=Genbank:WP_032423013.1;Name=WP_032423013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220878.1;locus_tag=LI478_RS26265;product=minor capsid protein;protein_id=WP_032423013.1;transl_table=11 NZ_CP085480.1 RefSeq gene 69931 70677 . + . ID=gene-LI478_RS26270;Name=LI478_RS26270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS26270 NZ_CP085480.1 Protein Homology CDS 69931 70677 . + 0 ID=cds-WP_004109839.1;Parent=gene-LI478_RS26270;Dbxref=Genbank:WP_004109839.1;Name=WP_004109839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220877.1;locus_tag=LI478_RS26270;product=Ig domain-containing protein;protein_id=WP_004109839.1;transl_table=11 NZ_CP085480.1 RefSeq gene 70739 71056 . + . ID=gene-LI478_RS26275;Name=LI478_RS26275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS26275 NZ_CP085480.1 Protein Homology CDS 70739 71056 . + 0 ID=cds-WP_004109835.1;Parent=gene-LI478_RS26275;Dbxref=Genbank:WP_004109835.1;Name=WP_004109835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220876.1;locus_tag=LI478_RS26275;product=hypothetical protein;protein_id=WP_004109835.1;transl_table=11 NZ_CP085480.1 RefSeq gene 71182 71406 . + . ID=gene-LI478_RS26280;Name=LI478_RS26280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS26280 NZ_CP085480.1 Protein Homology CDS 71182 71406 . + 0 ID=cds-WP_014342129.1;Parent=gene-LI478_RS26280;Dbxref=Genbank:WP_014342129.1;Name=WP_014342129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220875.1;locus_tag=LI478_RS26280;product=hypothetical protein;protein_id=WP_014342129.1;transl_table=11 NZ_CP085480.1 RefSeq gene 71414 75949 . + . ID=gene-LI478_RS26285;Name=LI478_RS26285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS26285 NZ_CP085480.1 Protein Homology CDS 71414 75949 . + 0 ID=cds-WP_227394190.1;Parent=gene-LI478_RS26285;Dbxref=Genbank:WP_227394190.1;Name=WP_227394190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019704526.1;locus_tag=LI478_RS26285;product=tape measure protein;protein_id=WP_227394190.1;transl_table=11 NZ_CP085480.1 RefSeq gene 75993 76328 . + . ID=gene-LI478_RS26290;Name=LI478_RS26290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS26290 NZ_CP085480.1 Protein Homology CDS 75993 76328 . + 0 ID=cds-WP_032423010.1;Parent=gene-LI478_RS26290;Dbxref=Genbank:WP_032423010.1;Name=WP_032423010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220872.1;locus_tag=LI478_RS26290;product=phage tail protein;protein_id=WP_032423010.1;transl_table=11 NZ_CP085480.1 RefSeq gene 76415 77113 . + . ID=gene-LI478_RS26295;Name=LI478_RS26295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS26295 NZ_CP085480.1 Protein Homology CDS 76415 77113 . + 0 ID=cds-WP_004109820.1;Parent=gene-LI478_RS26295;Dbxref=Genbank:WP_004109820.1;Name=WP_004109820.1;Ontology_term=GO:0016032,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220871.1;locus_tag=LI478_RS26295;product=phage minor tail protein L;protein_id=WP_004109820.1;transl_table=11 NZ_CP085480.1 RefSeq gene 77106 77903 . + . ID=gene-LI478_RS26300;Name=LI478_RS26300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS26300 NZ_CP085480.1 Protein Homology CDS 77106 77903 . + 0 ID=cds-WP_004109817.1;Parent=gene-LI478_RS26300;Dbxref=Genbank:WP_004109817.1;Name=WP_004109817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220870.1;locus_tag=LI478_RS26300;product=C40 family peptidase;protein_id=WP_004109817.1;transl_table=11 NZ_CP085480.1 RefSeq gene 77891 78502 . + . ID=gene-LI478_RS26305;Name=LI478_RS26305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS26305 NZ_CP085480.1 Protein Homology CDS 77891 78502 . + 0 ID=cds-WP_019704527.1;Parent=gene-LI478_RS26305;Dbxref=Genbank:WP_019704527.1;Name=WP_019704527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220869.1;locus_tag=LI478_RS26305;product=tail assembly protein;protein_id=WP_019704527.1;transl_table=11 NZ_CP085480.1 RefSeq gene 78519 90110 . + . ID=gene-LI478_RS26310;Name=LI478_RS26310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS26310 NZ_CP085480.1 GeneMarkS-2+ CDS 78519 90110 . + 0 ID=cds-WP_227394206.1;Parent=gene-LI478_RS26310;Dbxref=Genbank:WP_227394206.1;Name=WP_227394206.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LI478_RS26310;product=phage tail protein;protein_id=WP_227394206.1;transl_table=11 NZ_CP085480.1 RefSeq gene 90163 91608 . + . ID=gene-LI478_RS26315;Name=LI478_RS26315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS26315 NZ_CP085480.1 Protein Homology CDS 90163 91608 . + 0 ID=cds-WP_032443603.1;Parent=gene-LI478_RS26315;Dbxref=Genbank:WP_032443603.1;Name=WP_032443603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020324284.1;locus_tag=LI478_RS26315;product=tail fiber domain-containing protein;protein_id=WP_032443603.1;transl_table=11 NZ_CP085480.1 RefSeq gene 91704 92027 . + . ID=gene-LI478_RS26320;Name=LI478_RS26320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS26320 NZ_CP085480.1 Protein Homology CDS 91704 92027 . + 0 ID=cds-WP_004109805.1;Parent=gene-LI478_RS26320;Dbxref=Genbank:WP_004109805.1;Name=WP_004109805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220864.1;locus_tag=LI478_RS26320;product=hypothetical protein;protein_id=WP_004109805.1;transl_table=11 NZ_CP085480.1 RefSeq gene 92041 92733 . + . ID=gene-LI478_RS26325;Name=LI478_RS26325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS26325 NZ_CP085480.1 Protein Homology CDS 92041 92733 . + 0 ID=cds-WP_039817677.1;Parent=gene-LI478_RS26325;Dbxref=Genbank:WP_039817677.1;Name=WP_039817677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220863.1;locus_tag=LI478_RS26325;product=membrane protein;protein_id=WP_039817677.1;transl_table=11 NZ_CP085480.1 RefSeq gene 92736 92987 . + . ID=gene-LI478_RS26330;Name=LI478_RS26330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS26330 NZ_CP085480.1 Protein Homology CDS 92736 92987 . + 0 ID=cds-WP_148053337.1;Parent=gene-LI478_RS26330;Dbxref=Genbank:WP_148053337.1;Name=WP_148053337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220862.1;locus_tag=LI478_RS26330;product=hypothetical protein;protein_id=WP_148053337.1;transl_table=11 NZ_CP085480.1 RefSeq gene 93404 93796 . + . ID=gene-LI478_RS26335;Name=LI478_RS26335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS26335 NZ_CP085480.1 Protein Homology CDS 93404 93796 . + 0 ID=cds-WP_032734133.1;Parent=gene-LI478_RS26335;Dbxref=Genbank:WP_032734133.1;Name=WP_032734133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012666561.1;locus_tag=LI478_RS26335;product=hypothetical protein;protein_id=WP_032734133.1;transl_table=11 NZ_CP085480.1 RefSeq gene 93781 94530 . + . ID=gene-LI478_RS26340;Name=LI478_RS26340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS26340 NZ_CP085480.1 Protein Homology CDS 93781 94530 . + 0 ID=cds-WP_112295238.1;Parent=gene-LI478_RS26340;Dbxref=Genbank:WP_112295238.1;Name=WP_112295238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000035506.1;locus_tag=LI478_RS26340;product=hypothetical protein;protein_id=WP_112295238.1;transl_table=11 NZ_CP085480.1 RefSeq gene 94715 95380 . + . ID=gene-LI478_RS26345;Name=LI478_RS26345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS26345 NZ_CP085480.1 Protein Homology CDS 94715 95380 . + 0 ID=cds-WP_032422982.1;Parent=gene-LI478_RS26345;Dbxref=Genbank:WP_032422982.1;Name=WP_032422982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220859.1;locus_tag=LI478_RS26345;product=AAA family ATPase;protein_id=WP_032422982.1;transl_table=11 NZ_CP085480.1 RefSeq gene 95386 95742 . + . ID=gene-LI478_RS26350;Name=LI478_RS26350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS26350 NZ_CP085480.1 Protein Homology CDS 95386 95742 . + 0 ID=cds-WP_014342115.1;Parent=gene-LI478_RS26350;Dbxref=Genbank:WP_014342115.1;Name=WP_014342115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220858.1;locus_tag=LI478_RS26350;product=hypothetical protein;protein_id=WP_014342115.1;transl_table=11 NZ_CP085480.1 RefSeq gene 95788 96546 . + . ID=gene-LI478_RS26355;Name=LI478_RS26355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS26355 NZ_CP085480.1 Protein Homology CDS 95788 96546 . + 0 ID=cds-WP_227394191.1;Parent=gene-LI478_RS26355;Dbxref=Genbank:WP_227394191.1;Name=WP_227394191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016051644.1;locus_tag=LI478_RS26355;product=DUF2971 domain-containing protein;protein_id=WP_227394191.1;transl_table=11 NZ_CP085480.1 RefSeq gene 96740 97465 . + . ID=gene-LI478_RS26360;Name=LI478_RS26360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS26360 NZ_CP085480.1 Protein Homology CDS 96740 97465 . + 0 ID=cds-WP_021313113.1;Parent=gene-LI478_RS26360;Dbxref=Genbank:WP_021313113.1;Name=WP_021313113.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220854.1;locus_tag=LI478_RS26360;product=hypothetical protein;protein_id=WP_021313113.1;transl_table=11 NZ_CP085480.1 RefSeq gene 97530 98870 . + . ID=gene-LI478_RS26365;Name=LI478_RS26365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS26365 NZ_CP085480.1 Protein Homology CDS 97530 98870 . + 0 ID=cds-WP_032440528.1;Parent=gene-LI478_RS26365;Dbxref=Genbank:WP_032440528.1;Name=WP_032440528.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015736.2;locus_tag=LI478_RS26365;product=AAA family ATPase;protein_id=WP_032440528.1;transl_table=11 NZ_CP085480.1 RefSeq gene 99017 100141 . + . ID=gene-LI478_RS26370;Name=LI478_RS26370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS26370 NZ_CP085480.1 Protein Homology CDS 99017 100141 . + 0 ID=cds-WP_161424758.1;Parent=gene-LI478_RS26370;Dbxref=Genbank:WP_161424758.1;Name=WP_161424758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220852.1;locus_tag=LI478_RS26370;product=DNA primase;protein_id=WP_161424758.1;transl_table=11 NZ_CP085480.1 RefSeq gene 100184 101350 . - . ID=gene-LI478_RS26375;Name=LI478_RS26375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS26375 NZ_CP085480.1 GeneMarkS-2+ CDS 100184 101350 . - 0 ID=cds-WP_112295236.1;Parent=gene-LI478_RS26375;Dbxref=Genbank:WP_112295236.1;Name=WP_112295236.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LI478_RS26375;product=hypothetical protein;protein_id=WP_112295236.1;transl_table=11 NZ_CP085480.1 RefSeq gene 101642 102430 . + . ID=gene-LI478_RS26380;Name=LI478_RS26380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS26380 NZ_CP085480.1 GeneMarkS-2+ CDS 101642 102430 . + 0 ID=cds-WP_102000810.1;Parent=gene-LI478_RS26380;Dbxref=Genbank:WP_102000810.1;Name=WP_102000810.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LI478_RS26380;product=hypothetical protein;protein_id=WP_102000810.1;transl_table=11 NZ_CP085480.1 RefSeq gene 102510 102977 . + . ID=gene-LI478_RS26385;Name=LI478_RS26385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS26385 NZ_CP085480.1 Protein Homology CDS 102510 102977 . + 0 ID=cds-WP_023279474.1;Parent=gene-LI478_RS26385;Dbxref=Genbank:WP_023279474.1;Name=WP_023279474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220849.1;locus_tag=LI478_RS26385;product=hypothetical protein;protein_id=WP_023279474.1;transl_table=11 NZ_CP085480.1 RefSeq pseudogene 102977 103090 . + . ID=gene-LI478_RS26390;Name=LI478_RS26390;end_range=103090,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LI478_RS26390;partial=true;pseudo=true NZ_CP085480.1 Protein Homology CDS 102977 103090 . + 0 ID=cds-LI478_RS26390;Parent=gene-LI478_RS26390;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=103090,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220848.1;locus_tag=LI478_RS26390;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP085480.1 RefSeq gene 103257 103556 . + . ID=gene-LI478_RS26395;Name=LI478_RS26395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS26395 NZ_CP085480.1 Protein Homology CDS 103257 103556 . + 0 ID=cds-WP_102000811.1;Parent=gene-LI478_RS26395;Dbxref=Genbank:WP_102000811.1;Name=WP_102000811.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000067986.1;locus_tag=LI478_RS26395;product=C-type natriuretic protein;protein_id=WP_102000811.1;transl_table=11 NZ_CP085480.1 RefSeq gene 104311 104385 . + . ID=gene-LI478_RS26400;Name=LI478_RS26400;gbkey=Gene;gene_biotype=tRNA;locus_tag=LI478_RS26400 NZ_CP085480.1 tRNAscan-SE tRNA 104311 104385 . + . ID=rna-LI478_RS26400;Parent=gene-LI478_RS26400;anticodon=(pos:104343..104345);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS26400;product=tRNA-Asn NZ_CP085480.1 tRNAscan-SE exon 104311 104385 . + . ID=exon-LI478_RS26400-1;Parent=rna-LI478_RS26400;anticodon=(pos:104343..104345);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS26400;product=tRNA-Asn NZ_CP085480.1 RefSeq gene 104533 104619 . + . ID=gene-LI478_RS26405;Name=LI478_RS26405;gbkey=Gene;gene_biotype=tRNA;locus_tag=LI478_RS26405 NZ_CP085480.1 tRNAscan-SE tRNA 104533 104619 . + . ID=rna-LI478_RS26405;Parent=gene-LI478_RS26405;anticodon=(pos:104565..104567);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS26405;product=tRNA-Ser NZ_CP085480.1 tRNAscan-SE exon 104533 104619 . + . ID=exon-LI478_RS26405-1;Parent=rna-LI478_RS26405;anticodon=(pos:104565..104567);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LI478_RS26405;product=tRNA-Ser NZ_CP085480.1 RefSeq gene 104788 105702 . - . ID=gene-LI478_RS26410;Name=LI478_RS26410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS26410 NZ_CP085480.1 GeneMarkS-2+ CDS 104788 105702 . - 0 ID=cds-WP_161424757.1;Parent=gene-LI478_RS26410;Dbxref=Genbank:WP_161424757.1;Name=WP_161424757.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LI478_RS26410;product=hypothetical protein;protein_id=WP_161424757.1;transl_table=11 NZ_CP085480.1 RefSeq gene 105862 106638 . + . ID=gene-LI478_RS26415;Name=phoH;gbkey=Gene;gene=phoH;gene_biotype=protein_coding;locus_tag=LI478_RS26415 NZ_CP085480.1 Protein Homology CDS 105862 106638 . + 0 ID=cds-WP_048272907.1;Parent=gene-LI478_RS26415;Dbxref=Genbank:WP_048272907.1;Name=WP_048272907.1;gbkey=CDS;gene=phoH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220832.1;locus_tag=LI478_RS26415;product=phosphate starvation-inducible protein PhoH;protein_id=WP_048272907.1;transl_table=11 NZ_CP085480.1 RefSeq gene 106768 107013 . + . ID=gene-LI478_RS26420;Name=LI478_RS26420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS26420 NZ_CP085480.1 Protein Homology CDS 106768 107013 . + 0 ID=cds-WP_202684357.1;Parent=gene-LI478_RS26420;Dbxref=Genbank:WP_202684357.1;Name=WP_202684357.1;Ontology_term=GO:0097573;gbkey=CDS;go_function=glutathione oxidoreductase activity|0097573||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006812570.1;locus_tag=LI478_RS26420;product=GrxA family glutaredoxin;protein_id=WP_202684357.1;transl_table=11 NZ_CP085480.1 RefSeq gene 107108 107725 . + . ID=gene-LI478_RS26425;Name=LI478_RS26425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS26425 NZ_CP085480.1 GeneMarkS-2+ CDS 107108 107725 . + 0 ID=cds-WP_227394192.1;Parent=gene-LI478_RS26425;Dbxref=Genbank:WP_227394192.1;Name=WP_227394192.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LI478_RS26425;product=hypothetical protein;protein_id=WP_227394192.1;transl_table=11 NZ_CP085480.1 RefSeq gene 108123 109025 . + . ID=gene-LI478_RS26430;Name=LI478_RS26430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LI478_RS26430 NZ_CP085480.1 GeneMarkS-2+ CDS 108123 109025 . + 0 ID=cds-WP_161424754.1;Parent=gene-LI478_RS26430;Dbxref=Genbank:WP_161424754.1;Name=WP_161424754.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LI478_RS26430;product=hypothetical protein;protein_id=WP_161424754.1;transl_table=11 ###