locus-tag	class	description
BB788_RS00020	COG0187	DNA topoisomerase II activity
BB788_RS00025	COG0561	phosphatase activity
BB788_RS00040	COG2186	Transcriptional regulator
BB788_RS00045	COG3734	2-keto-3-deoxy-galactonokinase
BB788_RS00050	COG0800	Aldolase
BB788_RS00060	COG2271	Major facilitator Superfamily
BB788_RS00065	COG0823	Involved in the tonB-independent uptake of proteins
BB788_RS00070	COG5645	(Lipo)protein
BB788_RS00085	COG3645	SOS response
BB788_RS00090	COG3645	SOS response
BB788_RS00100	COG2188	Transcriptional regulator
BB788_RS00115	COG2149	membrane
BB788_RS00135	COG2610	gluconate transmembrane transporter activity
BB788_RS00145	COG0583	DNA-binding transcription factor activity
BB788_RS00150	COG2814	Major facilitator Superfamily
BB788_RS00180	COG0028	Belongs to the TPP enzyme family
BB788_RS00185	COG0440	acetolactate synthase activity
BB788_RS00190	COG2197	response regulator
BB788_RS00200	COG2271	Major facilitator Superfamily
BB788_RS00245	COG2188	Transcriptional regulator
BB788_RS00270	COG4580	involved in the transport of maltose and maltodextrins
BB788_RS00275	COG1447	Phosphotransferase system cellobiose-specific component IIA
BB788_RS00280	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BB788_RS00280	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BB788_RS00290	COG1609	Transcriptional regulator
BB788_RS00300	COG3384	dioxygenase
BB788_RS00305	COG0583	DNA-binding transcription factor activity
BB788_RS00310	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
BB788_RS00315	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
BB788_RS00320	COG2828	Protein conserved in bacteria
BB788_RS00335	COG0697	spore germination
BB788_RS00340	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BB788_RS00340	COG1263	PTS System
BB788_RS00350	COG2814	Major facilitator Superfamily
BB788_RS00360	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BB788_RS00365	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BB788_RS00405	COG0583	DNA-binding transcription factor activity
BB788_RS00430	COG1464	Belongs to the NlpA lipoprotein family
BB788_RS00445	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
BB788_RS00455	COG1064	alcohol dehydrogenase
BB788_RS00485	COG2211	Major facilitator Superfamily
BB788_RS00490	COG1501	Belongs to the glycosyl hydrolase 31 family
BB788_RS00500	COG1486	melibiose metabolic process
BB788_RS00505	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BB788_RS00505	COG1263	PTS System
BB788_RS00510	COG2982	Protein involved in outer membrane biogenesis
BB788_RS00515	COG2233	PERMEase
BB788_RS00525	COG0786	glutamate:sodium symporter activity
BB788_RS00540	COG3074	FtsZ-dependent cytokinesis
BB788_RS00545	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
BB788_RS00570	COG3152	Membrane
BB788_RS00580	COG1494	fructose-1,6-bisphosphatase
BB788_RS00585	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
BB788_RS00590	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
BB788_RS00595	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
BB788_RS00615	COG2860	membrane
BB788_RS00625	COG1662	PFAM IS1 transposase
BB788_RS00630	COG3677	Transposase
BB788_RS00630	COG1662	PFAM IS1 transposase
BB788_RS00640	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
BB788_RS00640	COG2169	Transcriptional regulator
BB788_RS00645	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
BB788_RS00655	COG1561	YicC-like family, N-terminal region
BB788_RS00685	COG1131	(ABC) transporter
BB788_RS00690	COG0842	Transport permease protein
BB788_RS00715	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
BB788_RS00750	COG1519	Transferase
BB788_RS00755	COG1216	Glycosyl transferase, family 2
BB788_RS00760	COG0438	transferase activity, transferring glycosyl groups
BB788_RS00770	COG0859	PFAM glycosyl transferase family 9
BB788_RS00795	COG0859	PFAM glycosyl transferase family 9
BB788_RS00810	COG0156	8-amino-7-oxononanoate synthase activity
BB788_RS00820	COG0463	Glycosyl transferase, family 2
BB788_RS00825	COG2861	carbohydrate metabolic process
BB788_RS00830	COG4942	peptidase
BB788_RS00840	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
BB788_RS00845	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
BB788_RS00865	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
BB788_RS00875	COG2186	Transcriptional regulator
BB788_RS00895	COG3722	fumarate hydratase activity
BB788_RS00915	COG1566	PFAM secretion protein HlyD family protein
BB788_RS00920	COG0625	glutathione transferase activity
BB788_RS00930	COG3276	selenocysteine insertion sequence binding
BB788_RS00935	COG1414	Transcriptional regulator
BB788_RS00940	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
BB788_RS00945	COG3977	Valine--pyruvate aminotransferase
BB788_RS00950	COG0366	Alpha amylase catalytic
BB788_RS00960	COG2992	FlgJ-related protein
BB788_RS00965	COG1609	Transcriptional regulator
BB788_RS00965	COG2207	Transcriptional regulator
BB788_RS00970	COG4214	carbohydrate transport
BB788_RS00980	COG4213	ABC transporter substrate-binding protein
BB788_RS01000	COG4682	membrane
BB788_RS01005	COG4682	membrane
BB788_RS01010	COG3274	enterobacterial common antigen metabolic process
BB788_RS01050	COG1278	Cold shock
BB788_RS01055	COG2944	sequence-specific DNA binding
BB788_RS01060	COG2814	Major facilitator Superfamily
BB788_RS01080	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BB788_RS01090	COG1609	Transcriptional regulator
BB788_RS01100	COG2885	chlorophyll binding
BB788_RS01105	COG0243	molybdopterin cofactor binding
BB788_RS01110	COG0456	acetyltransferase
BB788_RS01115	COG2818	Glycosylase
BB788_RS01120	COG5571	outer membrane autotransporter
BB788_RS01125	COG2223	nitrite transmembrane transporter activity
BB788_RS01150	COG2801	Transposase and inactivated derivatives
BB788_RS01165	COG0747	negative chemotaxis
BB788_RS01170	COG0601	transmembrane transport
BB788_RS01175	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BB788_RS01180	COG0444	Belongs to the ABC transporter superfamily
BB788_RS01185	COG4608	Belongs to the ABC transporter superfamily
BB788_RS01210	COG1215	transferase activity, transferring glycosyl groups
BB788_RS01230	COG2194	sulfuric ester hydrolase activity
BB788_RS01260	COG1215	transferase activity, transferring glycosyl groups
BB788_RS01265	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
BB788_RS01270	COG3118	belongs to the thioredoxin family
BB788_RS01270	COG0457	Tetratricopeptide repeat
BB788_RS01280	COG2200	EAL domain
BB788_RS01280	COG2199	diguanylate cyclase activity
BB788_RS01290	COG0612	Peptidase, M16
BB788_RS01305	COG2982	Protein involved in outer membrane biogenesis
BB788_RS01310	COG0477	Major facilitator Superfamily
BB788_RS01315	COG1295	ribonuclease BN
BB788_RS01320	COG0583	DNA-binding transcription factor activity
BB788_RS01325	COG1028	Short-chain dehydrogenase reductase Sdr
BB788_RS01330	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BB788_RS01340	COG1454	alcohol dehydrogenase
BB788_RS01350	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
BB788_RS01355	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
BB788_RS01360	COG0671	phosphoesterase, PA-phosphatase related
BB788_RS01380	COG0589	response to stress
BB788_RS01390	COG0306	phosphate transporter
BB788_RS01395	COG2081	HI0933 family
BB788_RS01400	COG2239	Acts as a magnesium transporter
BB788_RS01415	COG1124	(ABC) transporter
BB788_RS01425	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BB788_RS01430	COG0601	transmembrane transport
BB788_RS01435	COG0747	negative chemotaxis
BB788_RS01445	COG3479	Phenolic acid decarboxylase
BB788_RS01485	COG0628	permease
BB788_RS01490	COG0477	Major facilitator Superfamily
BB788_RS01500	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
BB788_RS01515	COG3714	YhhN family
BB788_RS01525	COG3776	membrane
BB788_RS01530	COG0742	ribosomal rna small subunit methyltransferase
BB788_RS01535	COG0552	protein localization to endoplasmic reticulum
BB788_RS01540	COG2884	Cell division ATP-binding protein ftsE
BB788_RS01545	COG2177	Part of the ABC transporter FtsEX involved in
BB788_RS01560	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
BB788_RS01570	COG0683	leucine binding
BB788_RS01590	COG0683	leucine binding
BB788_RS01595	COG0559	Belongs to the binding-protein-dependent transport system permease family
BB788_RS01645	COG0584	glycerophosphoryl diester phosphodiesterase
BB788_RS01655	COG0405	Gamma-glutamyltransferase
BB788_RS01660	COG1247	-acetyltransferase
BB788_RS01675	COG0673	inositol 2-dehydrogenase activity
BB788_RS01680	COG1741	Belongs to the pirin family
BB788_RS01685	COG1609	Transcriptional regulator
BB788_RS01690	COG3265	gluconokinase activity
BB788_RS01695	COG2610	gluconate transmembrane transporter activity
BB788_RS01705	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
BB788_RS01730	COG0058	SHG alpha-glucan phosphorylase activity
BB788_RS01745	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
BB788_RS01760	COG1349	DNA-binding transcription factor activity
BB788_RS01775	COG0058	SHG alpha-glucan phosphorylase activity
BB788_RS01780	COG1640	4-alpha-glucanotransferase
BB788_RS01785	COG2610	gluconate transmembrane transporter activity
BB788_RS01795	COG1040	competence protein
BB788_RS01820	COG1918	ferrous iron import across plasma membrane
BB788_RS01825	COG2183	response to ionizing radiation
BB788_RS01830	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
BB788_RS01860	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
BB788_RS01865	COG1011	Hydrolase
BB788_RS01875	COG0494	nUDIX hydrolase
BB788_RS01880	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
BB788_RS01905	COG4796	Type ii and iii secretion system protein
BB788_RS01925	COG3266	domain, Protein
BB788_RS01930	COG0338	D12 class N6 adenine-specific DNA methyltransferase
BB788_RS01935	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
BB788_RS01960	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
BB788_RS01970	COG0402	S-adenosylhomocysteine deaminase activity
BB788_RS01975	COG0738	Major facilitator superfamily
BB788_RS02000	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
BB788_RS02005	COG1289	transmembrane transporter activity
BB788_RS02020	COG1765	OsmC-like protein
BB788_RS02025	COG3954	Phosphoribulokinase
BB788_RS02035	COG0429	hydrolase of the alpha beta-hydrolase fold
BB788_RS02045	COG0488	(ABC) transporter
BB788_RS02060	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
BB788_RS02065	COG1047	Peptidyl-prolyl cis-trans
BB788_RS02075	COG0545	Peptidyl-prolyl cis-trans isomerase
BB788_RS02080	COG2964	Protein conserved in bacteria
BB788_RS02135	COG0051	transcription antitermination factor activity, RNA binding
BB788_RS02160	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
BB788_RS02175	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
BB788_RS02240	COG0201	protein transport
BB788_RS02265	COG0202	RNA polymerase activity
BB788_RS02280	COG0789	Transcriptional regulator
BB788_RS02285	COG3036	rescue of stalled ribosome
BB788_RS02315	COG0758	DNA mediated transformation
BB788_RS02325	COG0551	DNA topoisomerase type I activity
BB788_RS02345	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
BB788_RS02380	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BB788_RS02385	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BB788_RS02390	COG1309	transcriptional regulator
BB788_RS02415	COG4145	pantothenate transmembrane transporter activity
BB788_RS02420	COG3924	membrane
BB788_RS02425	COG0439	Biotin carboxylase
BB788_RS02430	COG0511	ligase activity, forming carbon-carbon bonds
BB788_RS02460	COG2200	EAL domain
BB788_RS02460	COG2199	diguanylate cyclase activity
BB788_RS02470	COG1077	Cell shape determining protein MreB Mrl
BB788_RS02475	COG1792	Involved in formation and maintenance of cell shape
BB788_RS02480	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
BB788_RS02490	COG1530	ribonuclease E activity
BB788_RS02495	COG3164	Protein of unknown function
BB788_RS02500	COG0312	modulator of DNA gyrase
BB788_RS02505	COG0583	DNA-binding transcription factor activity
BB788_RS02520	COG1289	transmembrane transporter activity
BB788_RS02525	COG2732	(Barnase) inhibitor
BB788_RS02550	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
BB788_RS02555	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
BB788_RS02560	COG3105	Protein conserved in bacteria
BB788_RS02565	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
BB788_RS02585	COG0625	glutathione transferase activity
BB788_RS02590	COG2969	positive regulation of protein catabolic process
BB788_RS02600	COG0493	'glutamate synthase
BB788_RS02605	COG0070	glutamate synthase
BB788_RS02605	COG0069	glutamate synthase activity
BB788_RS02605	COG0067	glutamate synthase
BB788_RS02615	COG1242	4 iron, 4 sulfur cluster binding
BB788_RS02620	COG2271	Major facilitator Superfamily
BB788_RS02625	COG1063	alcohol dehydrogenase
BB788_RS02635	COG1312	Catalyzes the dehydration of D-mannonate
BB788_RS02640	COG0784	Response regulator, receiver
BB788_RS02640	COG2198	Histidine kinase
BB788_RS02640	COG5002	protein histidine kinase activity
BB788_RS02645	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
BB788_RS02650	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
BB788_RS02655	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
BB788_RS02665	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
BB788_RS02670	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
BB788_RS02675	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
BB788_RS02680	COG1137	ATPase activity
BB788_RS02685	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
BB788_RS02690	COG3117	lipopolysaccharide transmembrane transporter activity
BB788_RS02695	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
BB788_RS02705	COG0530	calcium, potassium:sodium antiporter activity
BB788_RS02710	COG1127	ABC transporter
BB788_RS02715	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
BB788_RS02720	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
BB788_RS02725	COG2854	intermembrane phospholipid transfer
BB788_RS02730	COG3113	response to antibiotic
BB788_RS02735	COG5007	Belongs to the BolA IbaG family
BB788_RS02745	COG3423	Transcriptional regulator
BB788_RS02750	COG0142	geranyltranstransferase activity
BB788_RS02765	COG0697	spore germination
BB788_RS02775	COG2027	D-alanyl-D-alanine carboxypeptidase
BB788_RS02785	COG1534	Rna-binding protein
BB788_RS02800	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
BB788_RS02805	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
BB788_RS02815	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
BB788_RS02860	COG0195	Participates in both transcription termination and antitermination
BB788_RS02905	COG0814	amino acid
BB788_RS02930	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
BB788_RS02975	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BB788_RS02980	COG0826	peptidase U32
BB788_RS02985	COG0826	peptidase U32
BB788_RS02990	COG3154	lipid carrier protein
BB788_RS02995	COG3153	acetyltransferase
BB788_RS03010	COG0693	protein deglycase activity
BB788_RS03015	COG0702	epimerase
BB788_RS03020	COG0701	Predicted permease
BB788_RS03025	COG2823	Periplasmic or secreted lipoprotein
BB788_RS03045	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
BB788_RS03060	COG1063	alcohol dehydrogenase
BB788_RS03065	COG3775	system Galactitol-specific IIC component
BB788_RS03070	COG3414	Phosphotransferase system galactitol-specific IIB component
BB788_RS03075	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
BB788_RS03085	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
BB788_RS03085	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
BB788_RS03090	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BB788_RS03090	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
BB788_RS03090	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BB788_RS03095	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BB788_RS03105	COG1662	PFAM IS1 transposase
BB788_RS03105	COG3677	Transposase
BB788_RS03110	COG1662	PFAM IS1 transposase
BB788_RS03115	COG1105	Belongs to the carbohydrate kinase PfkB family
BB788_RS03130	COG1349	DNA-binding transcription factor activity
BB788_RS03135	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BB788_RS03140	COG2721	sulfolactate sulfo-lyase activity
BB788_RS03150	COG2271	Major facilitator Superfamily
BB788_RS03160	COG2084	Dehydrogenase
BB788_RS03165	COG1929	Belongs to the glycerate kinase type-1 family
BB788_RS03200	COG1741	Belongs to the pirin family
BB788_RS03205	COG0583	DNA-binding transcription factor activity
BB788_RS03210	COG3152	Membrane
BB788_RS03215	COG0435	Glutathione S-transferase
BB788_RS03220	COG2259	Doxx family
BB788_RS03230	COG5393	Putative Actinobacterial Holin-X, holin superfamily III
BB788_RS03235	COG4575	ribosome binding
BB788_RS03240	COG1422	Protein of unknown function (DUF1090)
BB788_RS03250	COG0586	Pfam SNARE associated Golgi protein
BB788_RS03255	COG2186	Transcriptional regulator
BB788_RS03260	COG2271	Major facilitator Superfamily
BB788_RS03270	COG2721	sulfolactate sulfo-lyase activity
BB788_RS03285	COG0861	Integral membrane protein TerC family
BB788_RS03290	COG0673	inositol 2-dehydrogenase activity
BB788_RS03295	COG1451	nucleotide metabolic process
BB788_RS03315	COG1902	pentaerythritol trinitrate reductase activity
BB788_RS03315	COG0446	pyridine nucleotide-disulphide oxidoreductase
BB788_RS03370	COG1695	Transcriptional regulator
BB788_RS03380	COG2375	cellular response to nickel ion
BB788_RS03395	COG1461	Dihydroxyacetone kinase
BB788_RS03400	COG2376	Dihydroxyacetone kinase
BB788_RS03480	COG3247	response to pH
BB788_RS03490	COG0784	Response regulator, receiver
BB788_RS03490	COG2205	protein histidine kinase activity
BB788_RS03490	COG2198	Histidine kinase
BB788_RS03490	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BB788_RS03505	COG2205	protein histidine kinase activity
BB788_RS03505	COG2198	Histidine kinase
BB788_RS03505	COG0784	Response regulator, receiver
BB788_RS03505	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BB788_RS03510	COG2197	response regulator
BB788_RS03535	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
BB788_RS03540	COG0358	DNA primase activity
BB788_RS03545	COG0828	Belongs to the bacterial ribosomal protein bS21 family
BB788_RS03615	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
BB788_RS03630	COG4991	sh3 domain protein
BB788_RS03635	COG3025	triphosphatase activity
BB788_RS03660	COG2960	long-chain fatty acid transporting porin activity
BB788_RS03675	COG3384	dioxygenase
BB788_RS03680	COG0754	glutathionylspermidine amidase activity
BB788_RS03695	COG0494	nUDIX hydrolase
BB788_RS03700	COG3151	Protein conserved in bacteria
BB788_RS03705	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
BB788_RS03710	COG3150	esterase
BB788_RS03720	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
BB788_RS03725	COG2249	NAD(P)H dehydrogenase (quinone) activity
BB788_RS03730	COG0642	Histidine kinase
BB788_RS03740	COG3111	PFAM Bacterial OB fold (BOF) protein
BB788_RS03745	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
BB788_RS03750	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
BB788_RS03755	COG0204	Acyl-transferase
BB788_RS03760	COG2132	Multicopper oxidase
BB788_RS03775	COG0656	L-ascorbic acid biosynthetic process
BB788_RS03780	COG1979	alcohol dehydrogenase
BB788_RS03785	COG2207	Transcriptional regulator
BB788_RS03790	COG0586	Pfam SNARE associated Golgi protein
BB788_RS03795	COG0626	cystathionine gamma-synthase activity
BB788_RS03810	COG0848	biopolymer transport protein
BB788_RS03815	COG2211	Major facilitator Superfamily
BB788_RS03840	COG0625	glutathione transferase activity
BB788_RS03855	COG0754	glutathionylspermidine amidase activity
BB788_RS03860	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BB788_RS03880	COG0583	DNA-binding transcription factor activity
BB788_RS03885	COG0626	cystathionine gamma-synthase activity
BB788_RS04180	COG3423	Transcriptional regulator
BB788_RS04190	COG1278	Cold shock
BB788_RS04195	COG3423	Transcriptional regulator
BB788_RS04250	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
BB788_RS04260	COG1811	Na channel or pump
BB788_RS04270	COG1982	Orn Lys Arg decarboxylase major
BB788_RS04275	COG2211	Major facilitator Superfamily
BB788_RS04290	COG1194	a g-specific adenine glycosylase
BB788_RS04300	COG3171	Protein conserved in bacteria
BB788_RS04310	COG0635	Involved in the biosynthesis of porphyrin-containing compound
BB788_RS04325	COG0762	integral membrane protein
BB788_RS04330	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
BB788_RS04335	COG2805	Type II/IV secretion system protein
BB788_RS04360	COG0189	ligase activity
BB788_RS04365	COG1385	rRNA (uridine-N3-)-methyltransferase activity
BB788_RS04370	COG2356	endonuclease I
BB788_RS04380	COG2814	Major facilitator Superfamily
BB788_RS04415	COG2146	nitrite reductase [NAD(P)H] activity
BB788_RS04430	COG1028	Short-chain dehydrogenase reductase Sdr
BB788_RS04435	COG1414	Transcriptional regulator
BB788_RS04465	COG1028	Short-chain dehydrogenase reductase Sdr
BB788_RS04470	COG1712	Catalyzes the reversible NADPH-dependent reductive amination of L-2-amino-6-oxopimelate, the acyclic form of L- tetrahydrodipicolinate, to generate the meso compound, D,L-2,6- diaminopimelate
BB788_RS04490	COG0501	Belongs to the peptidase M48B family
BB788_RS04495	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
BB788_RS04510	COG0191	fructose-bisphosphate aldolase activity
BB788_RS04515	COG0668	transmembrane transport
BB788_RS04530	COG2968	Membrane
BB788_RS04550	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
BB788_RS04555	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
BB788_RS04575	COG0006	proline dipeptidase activity
BB788_RS04580	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
BB788_RS04585	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
BB788_RS04605	COG1028	Short-chain dehydrogenase reductase Sdr
BB788_RS04610	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BB788_RS04630	COG2723	6-phospho-beta-galactosidase activity
BB788_RS04635	COG1737	Transcriptional regulator
BB788_RS04645	COG1272	protein, Hemolysin III
BB788_RS04655	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
BB788_RS04665	COG0716	FMN binding
BB788_RS04670	COG4974	Belongs to the 'phage' integrase family
BB788_RS04680	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
BB788_RS04705	COG4942	peptidase
BB788_RS04715	COG2814	Major facilitator Superfamily
BB788_RS04730	COG0667	Aldo Keto reductase
BB788_RS04765	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
BB788_RS04770	COG1393	Belongs to the ArsC family
BB788_RS04785	COG1538	Outer membrane efflux protein
BB788_RS04790	COG1289	transmembrane transporter activity
BB788_RS04805	COG3592	Divergent 4Fe-4S mono-cluster
BB788_RS04810	COG2388	GCN5-related N-acetyl-transferase
BB788_RS04820	COG3539	Fimbrial protein
BB788_RS04825	COG3539	Fimbrial protein
BB788_RS04830	COG3539	Fimbrial protein
BB788_RS04835	COG3188	usher protein
BB788_RS04840	COG3121	Chaperone
BB788_RS04845	COG3539	Fimbrial protein
BB788_RS04860	COG4974	Belongs to the 'phage' integrase family
BB788_RS04865	COG0582	viral genome integration into host DNA
BB788_RS04880	COG2215	Belongs to the NiCoT transporter (TC 2.A.52) family
BB788_RS04885	COG1846	Transcriptional regulator
BB788_RS04890	COG0697	spore germination
BB788_RS04940	COG0667	Aldo Keto reductase
BB788_RS04945	COG0814	amino acid
BB788_RS04960	COG0183	Belongs to the thiolase family
BB788_RS04970	COG0823	Involved in the tonB-independent uptake of proteins
BB788_RS04980	COG1028	Short-chain dehydrogenase reductase Sdr
BB788_RS04985	COG2814	Major facilitator Superfamily
BB788_RS05020	COG3842	ATPase activity
BB788_RS05025	COG0395	ABC-type sugar transport system, permease component
BB788_RS05030	COG1175	transmembrane transport
BB788_RS05035	COG1917	Cupin 2, conserved barrel domain protein
BB788_RS05040	COG1794	racemase activity, acting on amino acids and derivatives
BB788_RS05045	COG0583	DNA-binding transcription factor activity
BB788_RS05055	COG1609	Transcriptional regulator
BB788_RS05060	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BB788_RS05065	COG2723	6-phospho-beta-galactosidase activity
BB788_RS05070	COG2186	Transcriptional regulator
BB788_RS05080	COG1609	Transcriptional regulator
BB788_RS05105	COG0667	Aldo Keto reductase
BB788_RS05115	COG0861	Integral membrane protein TerC family
BB788_RS05150	COG2165	general secretion pathway protein
BB788_RS05155	COG4795	General secretion pathway protein
BB788_RS05165	COG4967	type IV pilus modification protein PilV
BB788_RS05170	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
BB788_RS05175	COG1025	Belongs to the peptidase M16 family
BB788_RS05180	COG1074	ATP-dependent DNA helicase activity
BB788_RS05185	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
BB788_RS05195	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
BB788_RS05195	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
BB788_RS05200	COG0860	N-Acetylmuramoyl-L-alanine amidase
BB788_RS05205	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
BB788_RS05235	COG4656	Part of a membrane complex involved in electron transport
BB788_RS05240	COG1012	belongs to the aldehyde dehydrogenase family
BB788_RS05240	COG1454	alcohol dehydrogenase
BB788_RS05270	COG4577	Carbon dioxide concentrating mechanism carboxysome shell protein
BB788_RS05435	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
BB788_RS05440	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
BB788_RS05445	COG2166	iron-sulfur cluster assembly
BB788_RS05450	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
BB788_RS05460	COG0583	DNA-binding transcription factor activity
BB788_RS05465	COG2363	Small membrane protein
BB788_RS05475	COG1349	DNA-binding transcription factor activity
BB788_RS05495	COG0738	Major facilitator superfamily
BB788_RS05505	COG0235	Class ii aldolase
BB788_RS05510	COG1454	alcohol dehydrogenase
BB788_RS05530	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BB788_RS05545	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
BB788_RS05550	COG2011	ABC-type metal ion transport system permease component
BB788_RS05555	COG1464	Belongs to the NlpA lipoprotein family
BB788_RS05565	COG0477	Major facilitator Superfamily
BB788_RS05575	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
BB788_RS05580	COG1760	l-serine dehydratase
BB788_RS05585	COG0814	amino acid
BB788_RS05590	COG1611	Belongs to the LOG family
BB788_RS05605	COG3098	single-species biofilm formation
BB788_RS05610	COG0564	pseudouridine synthase activity
BB788_RS05615	COG0716	FMN binding
BB788_RS05620	COG2271	Major facilitator Superfamily
BB788_RS05625	COG4948	Mandelate Racemase Muconate Lactonizing
BB788_RS05630	COG4948	Mandelate Racemase Muconate Lactonizing
BB788_RS05635	COG1929	Belongs to the glycerate kinase type-1 family
BB788_RS05640	COG3437	response regulator, receiver
BB788_RS05640	COG3850	Histidine kinase
BB788_RS05640	COG4999	Histidine kinase
BB788_RS05640	COG2205	protein histidine kinase activity
BB788_RS05650	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
BB788_RS05655	COG3956	TIGRFAM MazG family protein
BB788_RS05680	COG0602	queuosine metabolic process
BB788_RS05685	COG0720	synthase
BB788_RS05710	COG2234	aminopeptidase activity
BB788_RS05770	COG1388	LysM domain
BB788_RS05770	COG4942	peptidase
BB788_RS05775	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
BB788_RS05800	COG0163	prenyltransferase activity
BB788_RS05805	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
BB788_RS05845	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BB788_RS05850	COG4558	Periplasmic binding protein
BB788_RS05855	COG3720	iron ion transport
BB788_RS05875	COG0679	Auxin Efflux Carrier
BB788_RS05890	COG1108	ABC-type Mn2 Zn2 transport systems permease components
BB788_RS05895	COG1108	ABC-type Mn2 Zn2 transport systems permease components
BB788_RS05900	COG1121	(ABC) transporter
BB788_RS05905	COG0803	Belongs to the bacterial solute-binding protein 9 family
BB788_RS05910	COG1609	Transcriptional regulator
BB788_RS05915	COG1940	carbohydrate kinase activity
BB788_RS05920	COG1447	Phosphotransferase system cellobiose-specific component IIA
BB788_RS05925	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BB788_RS05930	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BB788_RS05935	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BB788_RS05940	COG4580	involved in the transport of maltose and maltodextrins
BB788_RS05950	COG2723	6-phospho-beta-galactosidase activity
BB788_RS05960	COG0309	Hydrogenase expression formation protein (HypE)
BB788_RS05965	COG0409	Hydrogenase expression formation protein
BB788_RS05970	COG0298	carbon dioxide binding
BB788_RS05975	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
BB788_RS05995	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
BB788_RS06000	COG0651	ATP synthesis coupled electron transport
BB788_RS06005	COG0650	Formate hydrogenlyase subunit 4
BB788_RS06010	COG3262	NADH dehydrogenase (ubiquinone), 30 kDa subunit
BB788_RS06010	COG3261	NADH dehydrogenase
BB788_RS06015	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
BB788_RS06020	COG3260	NADH ubiquinone oxidoreductase 20
BB788_RS06030	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
BB788_RS06040	COG2723	6-phospho-beta-galactosidase activity
BB788_RS06045	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BB788_RS06045	COG1263	PTS System
BB788_RS06055	COG1609	Transcriptional regulator
BB788_RS06060	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
BB788_RS06065	COG0068	Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide
BB788_RS06070	COG3376	Belongs to the NiCoT transporter (TC 2.A.52) family
BB788_RS06100	COG1349	DNA-binding transcription factor activity
BB788_RS06105	COG4578	phosphoenolpyruvate-dependent sugar phosphotransferase system
BB788_RS06110	COG1028	Short-chain dehydrogenase reductase Sdr
BB788_RS06120	COG3732	PTS system glucitol sorbitol-specific
BB788_RS06125	COG3730	PTS system glucitol sorbitol-specific
BB788_RS06130	COG2951	lytic endotransglycosylase activity
BB788_RS06135	COG1121	(ABC) transporter
BB788_RS06140	COG1108	ABC-type Mn2 Zn2 transport systems permease components
BB788_RS06150	COG1546	Belongs to the CinA family
BB788_RS06175	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
BB788_RS06210	COG2823	Periplasmic or secreted lipoprotein
BB788_RS06215	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
BB788_RS06220	COG1238	metal cluster binding
BB788_RS06240	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
BB788_RS06245	COG2814	Major facilitator Superfamily
BB788_RS06250	COG1566	PFAM secretion protein HlyD family protein
BB788_RS06260	COG1846	Transcriptional regulator
BB788_RS06275	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
BB788_RS06285	COG4176	ABC-type proline glycine betaine transport system permease component
BB788_RS06300	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
BB788_RS06310	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
BB788_RS06315	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
BB788_RS06320	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BB788_RS06325	COG4575	ribosome binding
BB788_RS06345	COG2916	Histone family protein nucleoid-structuring protein H-NS
BB788_RS06360	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
BB788_RS06365	COG0640	Transcriptional regulator
BB788_RS06375	COG0583	DNA-binding transcription factor activity
BB788_RS06380	COG3284	Transcriptional regulator
BB788_RS06390	COG3539	Fimbrial protein
BB788_RS06415	COG3188	usher protein
BB788_RS06425	COG3539	Fimbrial protein
BB788_RS06430	COG2197	response regulator
BB788_RS06445	COG1028	Short-chain dehydrogenase reductase Sdr
BB788_RS06455	COG0235	Class ii aldolase
BB788_RS06465	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BB788_RS06500	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BB788_RS06505	COG2207	Transcriptional regulator
BB788_RS06505	COG3708	Transcriptional regulator
BB788_RS06535	COG2867	negative regulation of translational initiation
BB788_RS06555	COG0497	DNA recombination
BB788_RS06575	COG4536	flavin adenine dinucleotide binding
BB788_RS06580	COG4137	Cytochrome C assembly protein
BB788_RS06585	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
BB788_RS06625	COG2885	chlorophyll binding
BB788_RS06630	COG2199	diguanylate cyclase activity
BB788_RS06640	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
BB788_RS06645	COG0287	Prephenate dehydrogenase
BB788_RS06645	COG1605	Chorismate mutase
BB788_RS06655	COG1605	Chorismate mutase
BB788_RS06655	COG0077	Prephenate dehydratase
BB788_RS06660	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
BB788_RS06665	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
BB788_RS06680	COG0542	response to heat
BB788_RS06710	COG0477	Major facilitator Superfamily
BB788_RS06715	COG5544	Lipoprotein
BB788_RS06720	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BB788_RS06730	COG3148	PFAM DTW domain containing protein
BB788_RS06735	COG3118	belongs to the thioredoxin family
BB788_RS06740	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
BB788_RS06755	COG0513	Belongs to the DEAD box helicase family
BB788_RS06765	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
BB788_RS06775	COG3073	An anti-sigma factor for extracytoplasmic function (ECF) sigma factor sigma-E (RpoE). ECF sigma factors are held in an inactive form by an anti-sigma factor until released by regulated intramembrane proteolysis (RIP). RIP occurs when an extracytoplasmic signal triggers a concerted proteolytic cascade to transmit information and elicit cellular responses. The membrane-spanning regulatory substrate protein is first cut periplasmically (site-1 protease, S1P, DegS), then within the membrane itself (site-2 protease, S2P, RseP), while cytoplasmic proteases finish degrading the anti-sigma factor, liberating sigma-E
BB788_RS06780	COG3026	antisigma factor binding
BB788_RS06785	COG3086	response to oxidative stress
BB788_RS06795	COG0681	Belongs to the peptidase S26 family
BB788_RS06820	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
BB788_RS06830	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
BB788_RS06835	COG1737	Transcriptional regulator
BB788_RS06840	COG0560	Phosphoserine phosphatase
BB788_RS06855	COG0047	phosphoribosylformylglycinamidine synthase activity
BB788_RS06855	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
BB788_RS06860	COG2205	protein histidine kinase activity
BB788_RS06865	COG3170	Tfp pilus assembly protein FimV
BB788_RS06870	COG2204	response regulator
BB788_RS06875	COG0347	Belongs to the P(II) protein family
BB788_RS06880	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
BB788_RS06880	COG1017	nitric oxide dioxygenase activity
BB788_RS06895	COG2259	Doxx family
BB788_RS06900	COG1940	carbohydrate kinase activity
BB788_RS06905	COG0457	Tetratricopeptide repeat
BB788_RS06910	COG0477	Major facilitator Superfamily
BB788_RS06910	COG2814	Major facilitator Superfamily
BB788_RS06915	COG2017	converts alpha-aldose to the beta-anomer
BB788_RS06920	COG2814	Major facilitator Superfamily
BB788_RS06925	COG3711	transcriptional antiterminator
BB788_RS06930	COG3683	transport system, periplasmic component
BB788_RS06935	COG2215	Belongs to the NiCoT transporter (TC 2.A.52) family
BB788_RS06965	COG0822	iron-sulfur transferase activity
BB788_RS06985	COG0633	Ferredoxin
BB788_RS06990	COG2975	iron-sulfur cluster assembly
BB788_RS07010	COG2897	thiosulfate sulfurtransferase activity
BB788_RS07015	COG2373	Large extracellular alpha-helical protein
BB788_RS07020	COG4953	penicillin-binding protein 1C
BB788_RS07050	COG2976	Protein conserved in bacteria
BB788_RS07070	COG1645	bacterial-type flagellum-dependent swarming motility
BB788_RS07080	COG0516	GMP reductase activity
BB788_RS07080	COG0517	IMP dehydrogenase activity
BB788_RS07090	COG3119	arylsulfatase activity
BB788_RS07095	COG0641	radical SAM
BB788_RS07115	COG2200	EAL domain
BB788_RS07130	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
BB788_RS07145	COG2723	6-phospho-beta-galactosidase activity
BB788_RS07155	COG2233	PERMEase
BB788_RS07170	COG1393	Belongs to the ArsC family
BB788_RS07175	COG4783	chaperone-mediated protein folding
BB788_RS07185	COG0628	permease
BB788_RS07190	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
BB788_RS07195	COG2716	regulation of RNA biosynthetic process
BB788_RS07205	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
BB788_RS07215	COG2321	neutral zinc metallopeptidase
BB788_RS07220	COG1444	tRNA N-acetyltransferase activity
BB788_RS07225	COG0400	carboxylic ester hydrolase activity
BB788_RS07240	COG1393	Belongs to the ArsC family
BB788_RS07245	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BB788_RS07255	COG0493	'glutamate synthase
BB788_RS07255	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
BB788_RS07265	COG5342	invasion associated locus B
BB788_RS07270	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
BB788_RS07275	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
BB788_RS07285	COG4810	utilization protein
BB788_RS07375	COG0860	N-Acetylmuramoyl-L-alanine amidase
BB788_RS07395	COG2837	iron assimilation
BB788_RS07410	COG4150	thiosulfate binding
BB788_RS07415	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
BB788_RS07420	COG4208	sulfate ABC transporter
BB788_RS07425	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
BB788_RS07435	COG4319	ketosteroid isomerase
BB788_RS07475	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
BB788_RS07500	COG3530	Putative quorum-sensing-regulated virulence factor
BB788_RS07505	COG0385	Bile acid
BB788_RS07510	COG0583	DNA-binding transcription factor activity
BB788_RS07540	COG3415	Transposase
BB788_RS07545	COG3415	Transposase
BB788_RS07560	COG2199	diguanylate cyclase activity
BB788_RS07560	COG2200	EAL domain
BB788_RS07565	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
BB788_RS07580	COG0667	Aldo Keto reductase
BB788_RS07585	COG3961	Belongs to the TPP enzyme family
BB788_RS07600	COG3279	Response regulator of the LytR AlgR family
BB788_RS07605	COG3275	phosphorelay sensor kinase activity
BB788_RS07620	COG0436	Aminotransferase
BB788_RS07625	COG2807	transmembrane transport
BB788_RS07630	COG0590	tRNA wobble adenosine to inosine editing
BB788_RS07635	COG0583	DNA-binding transcription factor activity
BB788_RS07655	COG2116	formate transmembrane transporter activity
BB788_RS07660	COG2853	Lipoprotein
BB788_RS07670	COG3691	Protein conserved in bacteria
BB788_RS07685	COG2062	phosphohistidine phosphatase, SixA
BB788_RS07710	COG0730	response to heat
BB788_RS07715	COG3101	peptidyl-lysine hydroxylation
BB788_RS07730	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
BB788_RS07750	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
BB788_RS07760	COG0586	Pfam SNARE associated Golgi protein
BB788_RS07770	COG0285	dihydrofolate synthase activity
BB788_RS07775	COG3147	Non-essential cell division protein that could be required for efficient cell constriction
BB788_RS07780	COG1286	toxin biosynthetic process
BB788_RS07785	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
BB788_RS07790	COG0163	prenyltransferase activity
BB788_RS07815	COG4160	amino acid transport
BB788_RS07820	COG4598	ABC transporter
BB788_RS07835	COG1090	epimerase
BB788_RS07840	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
BB788_RS07845	COG0625	glutathione transferase activity
BB788_RS07850	COG0625	glutathione transferase activity
BB788_RS07855	COG0622	Phosphoesterase
BB788_RS07860	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
BB788_RS07865	COG0857	belongs to the CobB CobQ family
BB788_RS07865	COG0280	phosphate acetyltransferase
BB788_RS07885	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
BB788_RS07890	COG0471	metal ion transport
BB788_RS07890	COG0490	domain, Protein
BB788_RS07900	COG0436	Aminotransferase
BB788_RS07905	COG0583	DNA-binding transcription factor activity
BB788_RS07955	COG0839	Belongs to the complex I subunit 6 family
BB788_RS07965	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
BB788_RS07970	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
BB788_RS07985	COG2153	protein acetylation
BB788_RS07990	COG1169	isochorismate synthase
BB788_RS08015	COG0318	PFAM AMP-dependent synthetase and ligase
BB788_RS08025	COG5464	transposase or invertase
BB788_RS08045	COG1414	Transcriptional regulator
BB788_RS08055	COG2271	Major facilitator Superfamily
BB788_RS08065	COG0247	lactate metabolic process
BB788_RS08075	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
BB788_RS08080	COG2271	Major facilitator Superfamily
BB788_RS08085	COG0584	glycerophosphoryl diester phosphodiesterase
BB788_RS08095	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
BB788_RS08130	COG0642	Histidine kinase
BB788_RS08130	COG2198	Histidine kinase
BB788_RS08150	COG2169	Transcriptional regulator
BB788_RS08150	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
BB788_RS08155	COG3145	DNA-N1-methyladenine dioxygenase activity
BB788_RS08160	COG4615	Cyclic peptide transporter
BB788_RS08165	COG2239	Acts as a magnesium transporter
BB788_RS08170	COG0659	secondary active sulfate transmembrane transporter activity
BB788_RS08185	COG0628	permease
BB788_RS08210	COG1349	DNA-binding transcription factor activity
BB788_RS08215	COG0494	nUDIX hydrolase
BB788_RS08235	COG1061	Type III restriction enzyme res subunit
BB788_RS08240	COG1187	pseudouridine synthase activity
BB788_RS08245	COG2814	Major facilitator Superfamily
BB788_RS08255	COG4172	Belongs to the ABC transporter superfamily
BB788_RS08260	COG4239	(ABC) transporter, permease
BB788_RS08265	COG4174	ABC transporter (Permease)
BB788_RS08270	COG4166	transmembrane transport
BB788_RS08275	COG2200	EAL domain
BB788_RS08280	COG0791	NLP P60 protein
BB788_RS08285	COG0671	phosphoesterase, PA-phosphatase related
BB788_RS08290	COG0523	cobalamin synthesis protein
BB788_RS08295	COG0246	Mannitol dehydrogenase
BB788_RS08300	COG1312	Catalyzes the dehydration of D-mannonate
BB788_RS08335	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
BB788_RS08335	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
BB788_RS08340	COG1105	Belongs to the carbohydrate kinase PfkB family
BB788_RS08345	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BB788_RS08345	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BB788_RS08345	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
BB788_RS08355	COG2855	membrane
BB788_RS08365	COG0583	DNA-binding transcription factor activity
BB788_RS08370	COG0833	amino acid
BB788_RS08380	COG4771	TonB-dependent receptor
BB788_RS08395	COG2311	Membrane
BB788_RS08410	COG1129	ABC transporter
BB788_RS08420	COG2949	membrane
BB788_RS08435	COG1346	cytolysis
BB788_RS08445	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
BB788_RS08450	COG3659	wide pore channel activity
BB788_RS08465	COG2723	6-phospho-beta-galactosidase activity
BB788_RS08475	COG1538	Outer membrane efflux protein
BB788_RS08480	COG0586	Pfam SNARE associated Golgi protein
BB788_RS08490	COG1686	Belongs to the peptidase S11 family
BB788_RS08500	COG2801	Transposase and inactivated derivatives
BB788_RS08510	COG0277	FAD linked oxidase domain protein
BB788_RS08515	COG1472	Belongs to the glycosyl hydrolase 3 family
BB788_RS08520	COG1732	Glycine betaine
BB788_RS08525	COG1174	glycine betaine transport
BB788_RS08530	COG1125	glycine betaine transport
BB788_RS08535	COG1174	glycine betaine transport
BB788_RS08545	COG3275	phosphorelay sensor kinase activity
BB788_RS08555	COG4807	Protein conserved in bacteria
BB788_RS08575	COG5455	response to cobalt ion
BB788_RS08580	COG0583	DNA-binding transcription factor activity
BB788_RS08585	COG2252	PERMEase
BB788_RS08595	COG0583	DNA-binding transcription factor activity
BB788_RS08615	COG0351	phosphomethylpyrimidine kinase
BB788_RS08620	COG1830	Aldolase
BB788_RS08630	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
BB788_RS08655	COG1070	Carbohydrate kinase
BB788_RS08665	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
BB788_RS08670	COG4948	Mandelate Racemase Muconate Lactonizing
BB788_RS08675	COG0747	negative chemotaxis
BB788_RS08680	COG0601	transmembrane transport
BB788_RS08685	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BB788_RS08690	COG0444	Belongs to the ABC transporter superfamily
BB788_RS08695	COG4608	Belongs to the ABC transporter superfamily
BB788_RS08705	COG0826	peptidase U32
BB788_RS08710	COG0745	RESPONSE REGULATOR receiver
BB788_RS08715	COG2205	protein histidine kinase activity
BB788_RS08740	COG1301	dicarboxylic acid transport
BB788_RS08760	COG5002	protein histidine kinase activity
BB788_RS08765	COG0443	Heat shock 70 kDa protein
BB788_RS08770	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
BB788_RS08785	COG2982	Protein involved in outer membrane biogenesis
BB788_RS08790	COG1253	flavin adenine dinucleotide binding
BB788_RS08815	COG3677	Transposase
BB788_RS08815	COG1662	PFAM IS1 transposase
BB788_RS08820	COG1662	PFAM IS1 transposase
BB788_RS08845	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
BB788_RS08850	COG2244	polysaccharide biosynthetic process
BB788_RS08855	COG0438	transferase activity, transferring glycosyl groups
BB788_RS08880	COG0438	transferase activity, transferring glycosyl groups
BB788_RS08950	COG0438	transferase activity, transferring glycosyl groups
BB788_RS08955	COG1216	Glycosyl transferase, family 2
BB788_RS08955	COG1442	glycosyl transferase family 8
BB788_RS08965	COG0463	Glycosyl transferase, family 2
BB788_RS08990	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
BB788_RS09015	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
BB788_RS09020	COG0583	DNA-binding transcription factor activity
BB788_RS09025	COG0531	amino acid
BB788_RS09030	COG0640	Transcriptional regulator
BB788_RS09035	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
BB788_RS09040	COG2925	Exonuclease
BB788_RS09055	COG1289	transmembrane transporter activity
BB788_RS09075	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
BB788_RS09085	COG1942	4-Oxalocrotonate Tautomerase
BB788_RS09090	COG0583	DNA-binding transcription factor activity
BB788_RS09095	COG0095	Lipoate-protein ligase
BB788_RS09100	COG0477	Major facilitator Superfamily
BB788_RS09115	COG3300	MHYT domain
BB788_RS09115	COG5001	Diguanylate cyclase
BB788_RS09125	COG3615	Tellurite resistance protein tehB
BB788_RS09150	COG3706	GGDEF domain
BB788_RS09170	COG0534	Mate efflux family protein
BB788_RS09180	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
BB788_RS09200	COG0604	alcohol dehydrogenase
BB788_RS09205	COG1309	transcriptional regulator
BB788_RS09210	COG0025	NhaP-type Na H and K H
BB788_RS09290	COG2003	Belongs to the UPF0758 family
BB788_RS09345	COG3504	Conjugal transfer protein
BB788_RS09425	COG4771	TonB-dependent receptor
BB788_RS09430	COG1021	2,3-dihydroxybenzoate-AMP ligase
BB788_RS09450	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BB788_RS09450	COG2226	methyltransferase
BB788_RS09450	COG3433	isochorismatase activity
BB788_RS09465	COG1132	(ABC) transporter
BB788_RS09470	COG2814	Major facilitator Superfamily
BB788_RS09475	COG1169	isochorismate synthase
BB788_RS09480	COG0582	viral genome integration into host DNA
BB788_RS09530	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
BB788_RS09540	COG1418	mRNA catabolic process
BB788_RS09545	COG0270	DNA (cytosine-5-)-methyltransferase activity
BB788_RS09550	COG3727	T/G mismatch-specific endonuclease activity
BB788_RS09555	COG0697	spore germination
BB788_RS09560	COG2354	Protein conserved in bacteria
BB788_RS09590	COG0366	Alpha amylase catalytic
BB788_RS09595	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BB788_RS09605	COG0765	amino acid transport
BB788_RS09610	COG1126	abc transporter atp-binding protein
BB788_RS09615	COG2197	response regulator
BB788_RS09625	COG2197	response regulator
BB788_RS09660	COG3012	SEC-C Motif Domain Protein
BB788_RS09660	COG3318	Belongs to the UPF0149 family
BB788_RS09665	COG0814	amino acid
BB788_RS09675	COG1528	Iron-storage protein
BB788_RS09690	COG0477	Major facilitator Superfamily
BB788_RS09700	COG2211	Major facilitator Superfamily
BB788_RS09710	COG1528	Iron-storage protein
BB788_RS09720	COG1879	ABC-type sugar transport system periplasmic component
BB788_RS09730	COG1172	Belongs to the binding-protein-dependent transport system permease family
BB788_RS09755	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
BB788_RS09765	COG3102	Protein conserved in bacteria
BB788_RS09785	COG3788	relative of glutathione S-transferase, MAPEG superfamily
BB788_RS09790	COG1801	Protein of unknown function DUF72
BB788_RS09795	COG1335	isochorismatase
BB788_RS09805	COG0494	nUDIX hydrolase
BB788_RS09830	COG1108	ABC-type Mn2 Zn2 transport systems permease components
BB788_RS09840	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
BB788_RS09845	COG0739	heme binding
BB788_RS09850	COG1560	Kdo2-lipid A biosynthetic process
BB788_RS09860	COG1737	Transcriptional regulator
BB788_RS09875	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
BB788_RS09880	COG0129	dihydroxy-acid dehydratase activity
BB788_RS09885	COG0800	Aldolase
BB788_RS09895	COG3141	response to X-ray
BB788_RS09900	COG2979	Protein of unknown function (DUF533)
BB788_RS09905	COG1770	oligopeptidase
BB788_RS09910	COG1770	oligopeptidase
BB788_RS09915	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
BB788_RS09925	COG2372	response to copper ion
BB788_RS09930	COG1276	copper resistance
BB788_RS09950	COG2990	Protein conserved in bacteria
BB788_RS09975	COG3008	intermembrane lipid transfer
BB788_RS10005	COG2814	Major facilitator Superfamily
BB788_RS10010	COG1414	Transcriptional regulator
BB788_RS10050	COG0768	penicillin binding
BB788_RS10055	COG2226	methyltransferase
BB788_RS10075	COG3716	PTS system mannose fructose sorbose family IID component
BB788_RS10080	COG3715	PTS system
BB788_RS10085	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BB788_RS10085	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
BB788_RS10090	COG1253	flavin adenine dinucleotide binding
BB788_RS10095	COG2200	EAL domain
BB788_RS10105	COG1760	l-serine dehydratase
BB788_RS10125	COG0251	oxidation-reduction process
BB788_RS10130	COG1199	ATP-dependent helicase activity
BB788_RS10140	COG3065	identical protein binding
BB788_RS10150	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
BB788_RS10160	COG2894	cell division
BB788_RS10180	COG0179	Fumarylacetoacetate (FAA) hydrolase
BB788_RS10210	COG2719	SpoVR family
BB788_RS10235	COG1619	proteins homologs of microcin C7 resistance protein MccF
BB788_RS10245	COG4774	siderophore transport
BB788_RS10260	COG2308	Evidence 4 Homologs of previously reported genes of
BB788_RS10305	COG0583	DNA-binding transcription factor activity
BB788_RS10310	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
BB788_RS10325	COG1882	Formate acetyltransferase
BB788_RS10360	COG0583	DNA-binding transcription factor activity
BB788_RS10390	COG0583	DNA-binding transcription factor activity
BB788_RS10405	COG3122	Protein conserved in bacteria
BB788_RS10470	COG1262	PFAM Formylglycine-generating sulfatase enzyme
BB788_RS10480	COG1262	PFAM Formylglycine-generating sulfatase enzyme
BB788_RS10490	COG1262	PFAM Formylglycine-generating sulfatase enzyme
BB788_RS10550	COG0012	GTP binding
BB788_RS10570	COG0659	secondary active sulfate transmembrane transporter activity
BB788_RS10605	COG2890	protein-(glutamine-N5) methyltransferase activity
BB788_RS10625	COG0387	Pfam Sodium calcium exchanger
BB788_RS10630	COG4572	Cation transport regulator
BB788_RS10635	COG3703	Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides
BB788_RS10645	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
BB788_RS10650	COG3707	response regulator
BB788_RS10660	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
BB788_RS10670	COG1116	anion transmembrane transporter activity
BB788_RS10675	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
BB788_RS10675	COG2146	nitrite reductase [NAD(P)H] activity
BB788_RS10680	COG2146	nitrite reductase [NAD(P)H] activity
BB788_RS10680	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
BB788_RS10685	COG0243	molybdopterin cofactor binding
BB788_RS10690	COG4932	domain protein
BB788_RS10695	COG2197	response regulator
BB788_RS10700	COG3850	Histidine kinase
BB788_RS10705	COG2223	nitrite transmembrane transporter activity
BB788_RS10715	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
BB788_RS10720	COG1140	nitrate reductase beta subunit
BB788_RS10725	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
BB788_RS10730	COG2181	nitrate reductase activity
BB788_RS10740	COG1522	sequence-specific DNA binding
BB788_RS10775	COG0788	formyltetrahydrofolate deformylase activity
BB788_RS10785	COG1752	Esterase of the alpha-beta hydrolase superfamily
BB788_RS10790	COG0745	RESPONSE REGULATOR receiver
BB788_RS10795	COG1210	Utp--glucose-1-phosphate uridylyltransferase
BB788_RS10800	COG2916	Histone family protein nucleoid-structuring protein H-NS
BB788_RS10810	COG1435	thymidine kinase activity
BB788_RS10815	COG1454	alcohol dehydrogenase
BB788_RS10815	COG1012	belongs to the aldehyde dehydrogenase family
BB788_RS10825	COG2095	MarC family integral membrane protein
BB788_RS10835	COG4166	transmembrane transport
BB788_RS10840	COG0601	transmembrane transport
BB788_RS10845	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BB788_RS10850	COG0444	Belongs to the ABC transporter superfamily
BB788_RS10860	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
BB788_RS10885	COG2353	YceI-like domain
BB788_RS10910	COG2350	Protein conserved in bacteria
BB788_RS10920	COG3001	Fructosamine kinase
BB788_RS10930	COG1105	Belongs to the carbohydrate kinase PfkB family
BB788_RS10935	COG3137	Salt-induced outer membrane protein
BB788_RS10975	COG0072	phenylalanine-tRNA ligase activity
BB788_RS10975	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BB788_RS10995	COG0583	DNA-binding transcription factor activity
BB788_RS11015	COG0386	Belongs to the glutathione peroxidase family
BB788_RS11025	COG0791	NLP P60 protein
BB788_RS11035	COG4256	Hemin uptake protein
BB788_RS11040	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
BB788_RS11055	COG0574	Belongs to the PEP-utilizing enzyme family
BB788_RS11055	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
BB788_RS11065	COG0628	permease
BB788_RS11070	COG0247	lactate metabolic process
BB788_RS11070	COG0277	FAD linked oxidase domain protein
BB788_RS11075	COG0277	FAD linked oxidase domain protein
BB788_RS11075	COG0247	lactate metabolic process
BB788_RS11080	COG2050	protein possibly involved in aromatic compounds catabolism
BB788_RS11085	COG2261	transglycosylase associated protein
BB788_RS11115	COG1120	ATPase activity
BB788_RS11120	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BB788_RS11130	COG0583	DNA-binding transcription factor activity
BB788_RS11155	COG1304	FMN binding
BB788_RS11170	COG0316	Belongs to the HesB IscA family
BB788_RS11175	COG0719	Fe-S assembly protein
BB788_RS11180	COG0396	ATPase activity
BB788_RS11185	COG0719	Fe-S assembly protein
BB788_RS11200	COG1376	ErfK ybiS ycfS ynhG family protein
BB788_RS11230	COG1309	transcriptional regulator
BB788_RS11235	COG3185	4-Hydroxyphenylpyruvate dioxygenase
BB788_RS11235	COG1082	Xylose isomerase domain protein TIM barrel
BB788_RS11240	COG2271	Major facilitator Superfamily
BB788_RS11245	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
BB788_RS11255	COG1120	ATPase activity
BB788_RS11260	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BB788_RS11265	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
BB788_RS11270	COG1414	Transcriptional regulator
BB788_RS11305	COG2814	Major facilitator Superfamily
BB788_RS11325	COG0583	DNA-binding transcription factor activity
BB788_RS11350	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BB788_RS11355	COG1116	anion transmembrane transporter activity
BB788_RS11360	COG4774	siderophore transport
BB788_RS11365	COG1120	ATPase activity
BB788_RS11370	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BB788_RS11375	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BB788_RS11400	COG0765	amino acid transport
BB788_RS11405	COG1126	abc transporter atp-binding protein
BB788_RS11435	COG1473	amidohydrolase
BB788_RS11440	COG3383	formate dehydrogenase (NAD+) activity
BB788_RS11445	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
BB788_RS11460	COG1175	transmembrane transport
BB788_RS11490	COG4133	protoheme IX ABC transporter activity
BB788_RS11495	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
BB788_RS11500	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
BB788_RS11515	COG1138	Cytochrome C-type biogenesis protein
BB788_RS11520	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BB788_RS11525	COG4235	cytochrome complex assembly
BB788_RS11525	COG3088	subunit of a heme lyase
BB788_RS11560	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BB788_RS11595	COG1028	Short-chain dehydrogenase reductase Sdr
BB788_RS11600	COG2610	gluconate transmembrane transporter activity
BB788_RS11605	COG1250	3-hydroxyacyl-CoA dehydrogenase
BB788_RS11615	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
BB788_RS11625	COG0583	DNA-binding transcription factor activity
BB788_RS11650	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BB788_RS11675	COG0402	S-adenosylhomocysteine deaminase activity
BB788_RS11720	COG1028	Short-chain dehydrogenase reductase Sdr
BB788_RS11720	COG0604	alcohol dehydrogenase
BB788_RS11720	COG3321	synthase
BB788_RS11750	COG4608	Belongs to the ABC transporter superfamily
BB788_RS11755	COG0444	Belongs to the ABC transporter superfamily
BB788_RS11780	COG0346	lactoylglutathione lyase activity
BB788_RS11785	COG1349	DNA-binding transcription factor activity
BB788_RS11825	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
BB788_RS11845	COG0300	oxidoreductase activity
BB788_RS11895	COG0307	riboflavin synthase, alpha
BB788_RS11900	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
BB788_RS11905	COG2814	Major facilitator Superfamily
BB788_RS11910	COG0583	DNA-binding transcription factor activity
BB788_RS11920	COG2814	Major facilitator Superfamily
BB788_RS11935	COG0791	NLP P60 protein
BB788_RS11940	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
BB788_RS11950	COG0346	lactoylglutathione lyase activity
BB788_RS11955	COG1902	pentaerythritol trinitrate reductase activity
BB788_RS11960	COG1309	transcriptional regulator
BB788_RS11965	COG3313	Fe-S protein
BB788_RS11970	COG4989	oxidoreductase activity
BB788_RS11975	COG2032	superoxide dismutase activity
BB788_RS11980	COG1289	transmembrane transporter activity
BB788_RS11985	COG1566	PFAM secretion protein HlyD family protein
BB788_RS12000	COG3706	GGDEF domain
BB788_RS12015	COG3895	Periplasmic Protein
BB788_RS12030	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
BB788_RS12035	COG0625	glutathione transferase activity
BB788_RS12050	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
BB788_RS12060	COG4659	FMN binding
BB788_RS12095	COG2723	6-phospho-beta-galactosidase activity
BB788_RS12105	COG0673	inositol 2-dehydrogenase activity
BB788_RS12115	COG2814	Major facilitator Superfamily
BB788_RS12135	COG3038	cytochrome b561
BB788_RS12155	COG0583	DNA-binding transcription factor activity
BB788_RS12160	COG3485	protocatechuate 3,4-dioxygenase
BB788_RS12165	COG3485	protocatechuate 3,4-dioxygenase
BB788_RS12170	COG5383	Protein conserved in bacteria
BB788_RS12175	COG2272	Belongs to the type-B carboxylesterase lipase family
BB788_RS12190	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BB788_RS12195	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
BB788_RS12200	COG1275	C4-dicarboxylate transporter malic acid transport protein
BB788_RS12205	COG0500	methyltransferase
BB788_RS12215	COG0697	spore germination
BB788_RS12220	COG3708	Transcriptional regulator
BB788_RS12220	COG2207	Transcriptional regulator
BB788_RS12225	COG3135	benzoate transporter
BB788_RS12230	COG1396	sequence-specific DNA binding
BB788_RS12240	COG0826	peptidase U32
BB788_RS12260	COG1294	oxidase, subunit
BB788_RS12265	COG1271	oxidase subunit
BB788_RS12270	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BB788_RS12275	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
BB788_RS12280	COG3842	ATPase activity
BB788_RS12285	COG1176	ABC-type spermidine putrescine transport system, permease component I
BB788_RS12290	COG1177	transmembrane transport
BB788_RS12295	COG1012	belongs to the aldehyde dehydrogenase family
BB788_RS12330	COG1012	belongs to the aldehyde dehydrogenase family
BB788_RS12340	COG0747	negative chemotaxis
BB788_RS12350	COG3238	Protein conserved in bacteria
BB788_RS12355	COG1247	-acetyltransferase
BB788_RS12365	COG2130	NADP-dependent
BB788_RS12380	COG3691	Protein conserved in bacteria
BB788_RS12385	COG1228	amidohydrolase
BB788_RS12390	COG4772	TonB-dependent receptor
BB788_RS12415	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
BB788_RS12420	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BB788_RS12425	COG1473	amidohydrolase
BB788_RS12430	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BB788_RS12435	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BB788_RS12445	COG0765	amino acid transport
BB788_RS12450	COG1126	abc transporter atp-binding protein
BB788_RS12460	COG2271	Major facilitator Superfamily
BB788_RS12470	COG1609	Transcriptional regulator
BB788_RS12475	COG0625	glutathione transferase activity
BB788_RS12485	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
BB788_RS12490	COG3842	ATPase activity
BB788_RS12495	COG1840	ABC-type Fe3 transport system, periplasmic component
BB788_RS12500	COG1178	ABC-type Fe3 transport system permease component
BB788_RS12505	COG2162	N-hydroxyarylamine O-acetyltransferase activity
BB788_RS12510	COG2181	nitrate reductase activity
BB788_RS12515	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
BB788_RS12520	COG1140	nitrate reductase beta subunit
BB788_RS12525	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
BB788_RS12545	COG1414	Transcriptional regulator
BB788_RS12550	COG4948	Mandelate Racemase Muconate Lactonizing
BB788_RS12555	COG4829	muconolactone delta-isomerase
BB788_RS12560	COG3485	protocatechuate 3,4-dioxygenase
BB788_RS12570	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
BB788_RS12590	COG3383	formate dehydrogenase (NAD+) activity
BB788_RS12590	COG0243	molybdopterin cofactor binding
BB788_RS12595	COG3383	formate dehydrogenase (NAD+) activity
BB788_RS12595	COG0243	molybdopterin cofactor binding
BB788_RS12600	COG0437	4 iron, 4 sulfur cluster binding
BB788_RS12605	COG2864	formate dehydrogenase
BB788_RS12620	COG2326	polyphosphate kinase activity
BB788_RS12630	COG2814	Major facilitator Superfamily
BB788_RS12640	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BB788_RS12650	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BB788_RS12660	COG0747	negative chemotaxis
BB788_RS12665	COG1064	alcohol dehydrogenase
BB788_RS12685	COG0488	(ABC) transporter
BB788_RS12725	COG1028	Short-chain dehydrogenase reductase Sdr
BB788_RS12730	COG3729	General stress protein
BB788_RS12750	COG3685	Protein conserved in bacteria
BB788_RS12760	COG0366	Alpha amylase catalytic
BB788_RS12770	COG2323	membrane
BB788_RS12780	COG3111	PFAM Bacterial OB fold (BOF) protein
BB788_RS12790	COG1764	response to oxidative stress
BB788_RS12815	COG3781	membrane
BB788_RS12820	COG0243	molybdopterin cofactor binding
BB788_RS12825	COG0583	DNA-binding transcription factor activity
BB788_RS12830	COG1447	Phosphotransferase system cellobiose-specific component IIA
BB788_RS12835	COG2814	Major facilitator Superfamily
BB788_RS12845	COG1285	pathogenesis
BB788_RS12850	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
BB788_RS12860	COG0583	DNA-binding transcription factor activity
BB788_RS12880	COG0519	Catalyzes the synthesis of GMP from XMP
BB788_RS12880	COG0518	GMP synthase (glutamine-hydrolyzing) activity
BB788_RS12925	COG0596	Alpha beta hydrolase
BB788_RS12935	COG2205	protein histidine kinase activity
BB788_RS12945	COG2801	Transposase and inactivated derivatives
BB788_RS12960	COG0076	glutamate decarboxylase activity
BB788_RS12965	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
BB788_RS12970	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
BB788_RS12975	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BB788_RS12980	COG1116	anion transmembrane transporter activity
BB788_RS12985	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
BB788_RS13000	COG0673	inositol 2-dehydrogenase activity
BB788_RS13010	COG1609	Transcriptional regulator
BB788_RS13015	COG3706	GGDEF domain
BB788_RS13020	COG0402	S-adenosylhomocysteine deaminase activity
BB788_RS13025	COG1953	Uracil, thiamine, allantoin
BB788_RS13065	COG0406	alpha-ribazole phosphatase activity
BB788_RS13075	COG1335	isochorismatase
BB788_RS13090	COG2207	Transcriptional regulator
BB788_RS13115	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
BB788_RS13185	COG0765	amino acid transport
BB788_RS13195	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
BB788_RS13205	COG2070	2-Nitropropane dioxygenase
BB788_RS13210	COG0583	DNA-binding transcription factor activity
BB788_RS13220	COG1902	pentaerythritol trinitrate reductase activity
BB788_RS13225	COG4529	Protein conserved in bacteria
BB788_RS13230	COG0477	Major facilitator Superfamily
BB788_RS13250	COG3677	Transposase
BB788_RS13250	COG1662	PFAM IS1 transposase
BB788_RS13270	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
BB788_RS13280	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BB788_RS13300	COG2801	Transposase and inactivated derivatives
BB788_RS13315	COG4977	sequence-specific DNA binding
BB788_RS13340	COG4977	sequence-specific DNA binding
BB788_RS13345	COG1349	DNA-binding transcription factor activity
BB788_RS13360	COG1349	DNA-binding transcription factor activity
BB788_RS13365	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
BB788_RS13370	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BB788_RS13375	COG0738	Major facilitator superfamily
BB788_RS13420	COG1929	Belongs to the glycerate kinase type-1 family
BB788_RS13425	COG3835	regulator
BB788_RS13435	COG0583	DNA-binding transcription factor activity
BB788_RS13445	COG2186	Transcriptional regulator
BB788_RS13450	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BB788_RS13450	COG1263	PTS System
BB788_RS13465	COG2814	Major facilitator Superfamily
BB788_RS13470	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
BB788_RS13470	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
BB788_RS13490	COG2819	hydrolase of the alpha beta superfamily
BB788_RS13495	COG5001	Diguanylate cyclase
BB788_RS13495	COG3300	MHYT domain
BB788_RS13530	COG3188	usher protein
BB788_RS13545	COG1649	PFAM Uncharacterised BCR, COG1649
BB788_RS13550	COG3550	peptidyl-serine autophosphorylation
BB788_RS13555	COG1396	sequence-specific DNA binding
BB788_RS13560	COG2351	hydroxyisourate hydrolase activity
BB788_RS13565	COG3195	allantoin biosynthetic process
BB788_RS13565	COG3648	Uricase
BB788_RS13570	COG2233	PERMEase
BB788_RS13600	COG2207	Transcriptional regulator
BB788_RS13615	COG4628	conserved protein (DUF2132)
BB788_RS13635	COG2011	ABC-type metal ion transport system permease component
BB788_RS13640	COG2070	2-Nitropropane dioxygenase
BB788_RS13655	COG0477	Major facilitator Superfamily
BB788_RS13665	COG0346	lactoylglutathione lyase activity
BB788_RS13730	COG2199	diguanylate cyclase activity
BB788_RS13745	COG1012	belongs to the aldehyde dehydrogenase family
BB788_RS13750	COG0583	DNA-binding transcription factor activity
BB788_RS13760	COG0039	L-malate dehydrogenase activity
BB788_RS13765	COG1349	DNA-binding transcription factor activity
BB788_RS13770	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
BB788_RS13775	COG3395	kinase activity
BB788_RS13785	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
BB788_RS13800	COG2731	YhcH YjgK YiaL family protein
BB788_RS13805	COG1028	Short-chain dehydrogenase reductase Sdr
BB788_RS13835	COG4977	sequence-specific DNA binding
BB788_RS13845	COG0697	spore germination
BB788_RS13850	COG2814	Major facilitator Superfamily
BB788_RS13880	COG0683	leucine binding
BB788_RS13885	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
BB788_RS13930	COG2223	nitrite transmembrane transporter activity
BB788_RS13935	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
BB788_RS13950	COG1349	DNA-binding transcription factor activity
BB788_RS13955	COG2084	Dehydrogenase
BB788_RS13960	COG3395	kinase activity
BB788_RS13965	COG0235	Class ii aldolase
BB788_RS13970	COG3622	Belongs to the hyi family
BB788_RS13975	COG2610	gluconate transmembrane transporter activity
BB788_RS13980	COG3708	Transcriptional regulator
BB788_RS13980	COG2207	Transcriptional regulator
BB788_RS13995	COG2200	EAL domain
BB788_RS14000	COG1546	Belongs to the CinA family
BB788_RS14005	COG0071	Belongs to the small heat shock protein (HSP20) family
BB788_RS14050	COG2207	Transcriptional regulator
BB788_RS14065	COG4221	oxidoreductase activity
BB788_RS14070	COG1802	Transcriptional regulator
BB788_RS14075	COG0589	response to stress
BB788_RS14080	COG0246	Mannitol dehydrogenase
BB788_RS14085	COG2271	Major facilitator Superfamily
BB788_RS14100	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BB788_RS14115	COG0243	molybdopterin cofactor binding
BB788_RS14120	COG0437	4 iron, 4 sulfur cluster binding
BB788_RS14125	COG3302	dmso reductase anchor subunit
BB788_RS14140	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
BB788_RS14145	COG1940	carbohydrate kinase activity
BB788_RS14150	COG0583	DNA-binding transcription factor activity
BB788_RS14155	COG2814	Major facilitator Superfamily
BB788_RS14160	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
BB788_RS14180	COG3591	Belongs to the peptidase S1B family
BB788_RS14205	COG0628	permease
BB788_RS14235	COG0679	Auxin Efflux Carrier
BB788_RS14245	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
BB788_RS14270	COG3290	protein histidine kinase activity
BB788_RS14275	COG4565	transcriptional regulatory protein
BB788_RS14290	COG1902	pentaerythritol trinitrate reductase activity
BB788_RS14305	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
BB788_RS14305	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
BB788_RS14335	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
BB788_RS14340	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
BB788_RS14350	COG0183	Belongs to the thiolase family
BB788_RS14355	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
BB788_RS14370	COG2840	Smr protein MutS2
BB788_RS14375	COG0583	DNA-binding transcription factor activity
BB788_RS14385	COG1473	amidohydrolase
BB788_RS14390	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
BB788_RS14405	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
BB788_RS14420	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
BB788_RS14425	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
BB788_RS14455	COG0531	amino acid
BB788_RS14465	COG3136	membrane protein required for alginate biosynthesis
BB788_RS14470	COG0745	RESPONSE REGULATOR receiver
BB788_RS14480	COG2205	protein histidine kinase activity
BB788_RS14490	COG0114	fumarate hydratase activity
BB788_RS14495	COG2801	Transposase and inactivated derivatives
BB788_RS14505	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
BB788_RS14505	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
BB788_RS14510	COG1482	cell wall glycoprotein biosynthetic process
BB788_RS14515	COG5339	Protein conserved in bacteria
BB788_RS14520	COG1609	Transcriptional regulator
BB788_RS14525	COG1263	PTS System
BB788_RS14525	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BB788_RS14530	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
BB788_RS14555	COG2391	methyltransferase activity
BB788_RS14560	COG0425	Belongs to the sulfur carrier protein TusA family
BB788_RS14565	COG5562	phage envelope protein
BB788_RS14570	COG0401	homolog of Blt101
BB788_RS14575	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
BB788_RS14580	COG1012	belongs to the aldehyde dehydrogenase family
BB788_RS14590	COG1434	Gram-negative-bacterium-type cell wall biogenesis
BB788_RS14595	COG0477	Major facilitator Superfamily
BB788_RS14600	COG1113	amino acid transport
BB788_RS14605	COG2988	succinylglutamate desuccinylase activity
BB788_RS14610	COG3724	N-succinylarginine dihydrolase activity
BB788_RS14615	COG1012	belongs to the aldehyde dehydrogenase family
BB788_RS14620	COG3138	arginine N-succinyltransferase
BB788_RS14625	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
BB788_RS14635	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
BB788_RS14640	COG0667	Aldo Keto reductase
BB788_RS14645	COG0583	DNA-binding transcription factor activity
BB788_RS14670	COG4122	O-methyltransferase activity
BB788_RS14675	COG1643	Atp-dependent helicase
BB788_RS14690	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
BB788_RS14695	COG3327	negative regulation of DNA-templated transcription, initiation
BB788_RS14700	COG1541	Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA)
BB788_RS14705	COG0183	Belongs to the thiolase family
BB788_RS14710	COG2050	protein possibly involved in aromatic compounds catabolism
BB788_RS14715	COG1250	3-hydroxyacyl-CoA dehydrogenase
BB788_RS14720	COG1024	Enoyl-CoA hydratase
BB788_RS14725	COG1024	Enoyl-CoA hydratase
BB788_RS14730	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
BB788_RS14735	COG2151	metal-sulfur cluster biosynthetic enzyme
BB788_RS14740	COG3396	Phenylacetate-CoA oxygenase
BB788_RS14745	COG3460	Phenylacetate-CoA oxygenase
BB788_RS14750	COG3396	Phenylacetate-CoA oxygenase
BB788_RS14755	COG1012	belongs to the aldehyde dehydrogenase family
BB788_RS14755	COG2030	dehydratase
BB788_RS14780	COG1012	belongs to the aldehyde dehydrogenase family
BB788_RS14785	COG2207	Transcriptional regulator
BB788_RS14790	COG3784	Protein of unknown function (DUF1318)
BB788_RS14800	COG2911	Protein conserved in bacteria
BB788_RS14805	COG0586	Pfam SNARE associated Golgi protein
BB788_RS14810	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
BB788_RS14815	COG3187	Heat shock protein
BB788_RS14820	COG3042	response to heat
BB788_RS14830	COG1013	pyruvate-flavodoxin oxidoreductase activity
BB788_RS14830	COG0674	pyruvate-flavodoxin oxidoreductase activity
BB788_RS14830	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
BB788_RS14830	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
BB788_RS14835	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
BB788_RS14845	COG0589	response to stress
BB788_RS14855	COG0513	Belongs to the DEAD box helicase family
BB788_RS14875	COG1349	DNA-binding transcription factor activity
BB788_RS14880	COG0673	inositol 2-dehydrogenase activity
BB788_RS14895	COG1113	amino acid transport
BB788_RS14900	COG1522	sequence-specific DNA binding
BB788_RS14910	COG1448	Aminotransferase
BB788_RS14915	COG2011	ABC-type metal ion transport system permease component
BB788_RS14930	COG0436	Aminotransferase
BB788_RS14935	COG0604	alcohol dehydrogenase
BB788_RS14960	COG0583	DNA-binding transcription factor activity
BB788_RS14980	COG1028	Short-chain dehydrogenase reductase Sdr
BB788_RS14985	COG1309	transcriptional regulator
BB788_RS14990	COG1028	Short-chain dehydrogenase reductase Sdr
BB788_RS15110	COG2885	chlorophyll binding
BB788_RS15140	COG0693	protein deglycase activity
BB788_RS15150	COG1028	Short-chain dehydrogenase reductase Sdr
BB788_RS15155	COG0583	DNA-binding transcription factor activity
BB788_RS15175	COG0656	L-ascorbic acid biosynthetic process
BB788_RS15205	COG4166	transmembrane transport
BB788_RS15215	COG2866	Carboxypeptidase
BB788_RS15220	COG4948	Mandelate Racemase Muconate Lactonizing
BB788_RS15225	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
BB788_RS15230	COG3180	Ammonia monooxygenase
BB788_RS15240	COG1486	melibiose metabolic process
BB788_RS15245	COG0583	DNA-binding transcription factor activity
BB788_RS15255	COG3106	COG3106 Predicted ATPase
BB788_RS15265	COG1983	PspC domain protein
BB788_RS15275	COG1842	Phage shock protein A
BB788_RS15280	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
BB788_RS15290	COG1473	amidohydrolase
BB788_RS15305	COG0702	epimerase
BB788_RS15325	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
BB788_RS15330	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
BB788_RS15335	COG3344	reverse transcriptase
BB788_RS15400	COG1196	nuclear chromosome segregation
BB788_RS15485	COG3728	DNA packaging
BB788_RS15485	COG5484	DNA packaging
BB788_RS15540	COG0484	heat shock protein binding
BB788_RS15620	COG1484	DNA-dependent DNA replication
BB788_RS15675	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
BB788_RS15710	COG4171	peptide transport system, permease
BB788_RS15725	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
BB788_RS15735	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
BB788_RS15745	COG4950	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
BB788_RS15745	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
BB788_RS15760	COG1349	DNA-binding transcription factor activity
BB788_RS15775	COG0023	Translation Initiation Factor
BB788_RS15785	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
BB788_RS15790	COG3771	Involved in the assembly of lipopolysaccharide (LPS)
BB788_RS15805	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
BB788_RS15845	COG0616	signal peptide processing
BB788_RS15855	COG1028	Short-chain dehydrogenase reductase Sdr
BB788_RS15860	COG2109	Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids
BB788_RS15870	COG0583	DNA-binding transcription factor activity
BB788_RS15880	COG0009	L-threonylcarbamoyladenylate synthase
BB788_RS15890	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
BB788_RS15895	COG0512	Glutamine amidotransferase of anthranilate synthase
BB788_RS15895	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
BB788_RS15900	COG0135	phosphoribosylanthranilate isomerase activity
BB788_RS15900	COG0134	indole-3-glycerol-phosphate synthase activity
BB788_RS15955	COG4774	siderophore transport
BB788_RS15965	COG3047	cAMP biosynthetic process
BB788_RS15970	COG0727	PFAM Uncharacterised protein family (UPF0153)
BB788_RS16000	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
BB788_RS16005	COG1028	Short-chain dehydrogenase reductase Sdr
BB788_RS16010	COG1988	membrane-bound metal-dependent
BB788_RS16015	COG1823	symporter activity
BB788_RS16025	COG0753	catalase activity
BB788_RS16035	COG1486	melibiose metabolic process
BB788_RS16040	COG1917	Cupin 2, conserved barrel domain protein
BB788_RS16040	COG2169	Transcriptional regulator
BB788_RS16045	COG1447	Phosphotransferase system cellobiose-specific component IIA
BB788_RS16050	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BB788_RS16060	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BB788_RS16065	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
BB788_RS16075	COG0322	excinuclease ABC activity
BB788_RS16080	COG3678	ATP-independent chaperone mediated protein folding
BB788_RS16095	COG3724	N-succinylarginine dihydrolase activity
BB788_RS16105	COG3138	arginine N-succinyltransferase
BB788_RS16115	COG0708	Exodeoxyribonuclease III
BB788_RS16120	COG0398	Pfam SNARE associated Golgi protein
BB788_RS16125	COG0398	Pfam SNARE associated Golgi protein
BB788_RS16130	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
BB788_RS16135	COG4134	Bacterial extracellular solute-binding protein
BB788_RS16140	COG4135	transport system, permease component
BB788_RS16145	COG4136	ATPase activity
BB788_RS16150	COG2897	thiosulfate sulfurtransferase activity
BB788_RS16155	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
BB788_RS16160	COG0494	nUDIX hydrolase
BB788_RS16170	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
BB788_RS16175	COG3321	synthase
BB788_RS16175	COG0604	alcohol dehydrogenase
BB788_RS16175	COG1028	Short-chain dehydrogenase reductase Sdr
BB788_RS16180	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
BB788_RS16185	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
BB788_RS16190	COG0709	Synthesizes selenophosphate from selenide and ATP
BB788_RS16200	COG0778	Nitroreductase
BB788_RS16205	COG0616	signal peptide processing
BB788_RS16210	COG0252	asparaginase activity
BB788_RS16215	COG1335	isochorismatase
BB788_RS16230	COG3139	Protein of unknown function (DUF1315)
BB788_RS16250	COG0656	L-ascorbic acid biosynthetic process
BB788_RS16255	COG3713	MltA-interacting MipA family protein
BB788_RS16260	COG2766	serine protein kinase
BB788_RS16275	COG0386	Belongs to the glutathione peroxidase family
BB788_RS16300	COG1028	Short-chain dehydrogenase reductase Sdr
BB788_RS16305	COG0583	DNA-binding transcription factor activity
BB788_RS16310	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
BB788_RS16315	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
BB788_RS16320	COG3344	reverse transcriptase
BB788_RS16335	COG0859	PFAM glycosyl transferase family 9
BB788_RS16340	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
BB788_RS16350	COG2207	Transcriptional regulator
BB788_RS16355	COG2807	transmembrane transport
BB788_RS16360	COG0504	CTP synthase activity
BB788_RS16365	COG1683	Conserved Protein
BB788_RS16370	COG3189	MarR family transcriptional regulator
BB788_RS16375	COG3042	response to heat
BB788_RS16380	COG2199	diguanylate cyclase activity
BB788_RS16380	COG2203	Gaf domain
BB788_RS16400	COG3182	Iron-regulated membrane protein
BB788_RS16410	COG1560	Kdo2-lipid A biosynthetic process
BB788_RS16435	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
BB788_RS16440	COG3706	GGDEF domain
BB788_RS16445	COG0583	DNA-binding transcription factor activity
BB788_RS16450	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
BB788_RS16480	COG1294	oxidase, subunit
BB788_RS16485	COG1271	oxidase subunit
BB788_RS16490	COG3546	catalase activity
BB788_RS16495	COG3685	Protein conserved in bacteria
BB788_RS16500	COG3685	Protein conserved in bacteria
BB788_RS16505	COG3729	General stress protein
BB788_RS16515	COG1063	alcohol dehydrogenase
BB788_RS16520	COG3813	Protein conserved in bacteria
BB788_RS16540	COG0640	Transcriptional regulator
BB788_RS16545	COG0538	isocitrate dehydrogenase activity
BB788_RS16550	COG1187	pseudouridine synthase activity
BB788_RS16570	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
BB788_RS16590	COG2205	protein histidine kinase activity
BB788_RS16595	COG2850	peptidyl-arginine hydroxylation
BB788_RS16615	COG1177	transmembrane transport
BB788_RS16630	COG0318	PFAM AMP-dependent synthetase and ligase
BB788_RS16635	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
BB788_RS16640	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
BB788_RS16645	COG0698	ribose 5-phosphate isomerase
BB788_RS16660	COG3395	kinase activity
BB788_RS16675	COG2390	Transcriptional regulator
BB788_RS16685	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
BB788_RS16695	COG4591	ABC-type transport system involved in lipoprotein release permease component
BB788_RS16705	COG4591	ABC-type transport system involved in lipoprotein release permease component
BB788_RS16715	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
BB788_RS16720	COG1376	ErfK ybiS ycfS ynhG family protein
BB788_RS16720	COG1388	LysM domain
BB788_RS16735	COG1309	transcriptional regulator
BB788_RS16750	COG3134	Outer membrane lipoprotein
BB788_RS16755	COG1252	NADH dehydrogenase
BB788_RS16785	COG5633	Lipoprotein
BB788_RS16790	COG0537	adenosine 5'-monophosphoramidase activity
BB788_RS16800	COG0084	hydrolase, TatD family'
BB788_RS16805	COG0470	DNA polymerase III
BB788_RS16815	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
BB788_RS16820	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
BB788_RS16825	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
BB788_RS16840	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
BB788_RS16860	COG1399	metal-binding, possibly nucleic acid-binding protein
BB788_RS16875	COG1530	ribonuclease E activity
BB788_RS16880	COG1530	ribonuclease E activity
BB788_RS16885	COG0583	DNA-binding transcription factor activity
BB788_RS16890	COG2814	Major facilitator Superfamily
BB788_RS16910	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BB788_RS16965	COG1560	Kdo2-lipid A biosynthetic process
BB788_RS16985	COG5645	(Lipo)protein
BB788_RS17025	COG3381	protein complex oligomerization
BB788_RS17080	COG0583	DNA-binding transcription factor activity
BB788_RS17090	COG1335	isochorismatase
BB788_RS17105	COG1702	phosphate starvation-inducible protein PhoH
BB788_RS17125	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
BB788_RS17140	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
BB788_RS17155	COG1309	transcriptional regulator
BB788_RS17190	COG2233	PERMEase
BB788_RS17205	COG3729	General stress protein
BB788_RS17235	COG1028	Short-chain dehydrogenase reductase Sdr
BB788_RS17250	COG0531	amino acid
BB788_RS17260	COG0174	glutamine synthetase
BB788_RS17265	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
BB788_RS17270	COG1917	Cupin 2, conserved barrel domain protein
BB788_RS17270	COG1396	sequence-specific DNA binding
BB788_RS17275	COG1012	belongs to the aldehyde dehydrogenase family
BB788_RS17280	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BB788_RS17285	COG0583	DNA-binding transcription factor activity
BB788_RS17290	COG0473	3-isopropylmalate dehydrogenase activity
BB788_RS17295	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
BB788_RS17300	COG4638	Rieske (2fe-2S)
BB788_RS17305	COG1012	belongs to the aldehyde dehydrogenase family
BB788_RS17310	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
BB788_RS17315	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
BB788_RS17315	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
BB788_RS17315	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
BB788_RS17320	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BB788_RS17325	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BB788_RS17330	COG1882	Formate acetyltransferase
BB788_RS17335	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
BB788_RS17340	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BB788_RS17350	COG2207	Transcriptional regulator
BB788_RS17355	COG3706	GGDEF domain
BB788_RS17370	COG2200	EAL domain
BB788_RS17385	COG0670	Belongs to the BI1 family
BB788_RS17400	COG2207	Transcriptional regulator
BB788_RS17405	COG1881	PFAM PEBP family protein
BB788_RS17430	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BB788_RS17435	COG2274	protein secretion by the type I secretion system
BB788_RS17455	COG1832	CoA-binding protein
BB788_RS17465	COG0210	DNA helicase
BB788_RS17470	COG3304	Inner membrane component domain
BB788_RS17475	COG1289	transmembrane transporter activity
BB788_RS17480	COG3070	regulator of competence-specific genes
BB788_RS17505	COG1067	ATP-dependent peptidase activity
BB788_RS17515	COG3130	regulation of translation
BB788_RS17525	COG3009	Protein conserved in bacteria
BB788_RS17530	COG3008	intermembrane lipid transfer
BB788_RS17530	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
BB788_RS17535	COG2995	paraquat-inducible protein a
BB788_RS17540	COG0488	(ABC) transporter
BB788_RS17550	COG3217	Mosc domain protein beta barrel domain protein
BB788_RS17550	COG0633	Ferredoxin
BB788_RS17565	COG0431	NADPH-dependent FMN reductase
BB788_RS17575	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BB788_RS17580	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BB788_RS17590	COG0308	aminopeptidase N
BB788_RS17605	COG1473	amidohydrolase
BB788_RS17615	COG0814	amino acid
BB788_RS17625	COG1522	sequence-specific DNA binding
BB788_RS17640	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
BB788_RS17645	COG1448	Aminotransferase
BB788_RS17650	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BB788_RS17655	COG3108	Peptidase M15
BB788_RS17665	COG2989	Protein conserved in bacteria
BB788_RS17675	COG3095	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Probably acts via its interaction with MukB and MukF
BB788_RS17685	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
BB788_RS17690	COG1434	Gram-negative-bacterium-type cell wall biogenesis
BB788_RS17695	COG3173	Aminoglycoside phosphotransferase
BB788_RS17710	COG3214	Protein conserved in bacteria
BB788_RS17725	COG0658	competence protein
BB788_RS17725	COG2333	competence protein COMEC
BB788_RS17735	COG0539	negative regulation of cytoplasmic translation
BB788_RS17755	COG2323	membrane
BB788_RS17760	COG1944	ATP diphosphatase activity
BB788_RS17765	COG2116	formate transmembrane transporter activity
BB788_RS17770	COG1882	Formate acetyltransferase
BB788_RS17775	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
BB788_RS17780	COG0477	Major facilitator Superfamily
BB788_RS17790	COG3302	dmso reductase anchor subunit
BB788_RS17795	COG0437	4 iron, 4 sulfur cluster binding
BB788_RS17800	COG0243	molybdopterin cofactor binding
BB788_RS17810	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
BB788_RS17820	COG1178	ABC-type Fe3 transport system permease component
BB788_RS17820	COG1674	ftsk spoiiie
BB788_RS17840	COG0492	ferredoxin-NADP+ reductase activity
BB788_RS17845	COG4988	ABC transporter
BB788_RS17850	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
BB788_RS17865	COG0542	response to heat
BB788_RS17875	COG1278	Cold shock
BB788_RS17890	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BB788_RS17895	COG3593	DNA synthesis involved in DNA repair
BB788_RS17905	COG2431	L-lysine efflux transmembrane transporter activity
BB788_RS17915	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
BB788_RS17925	COG0028	Belongs to the TPP enzyme family
BB788_RS17930	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
BB788_RS17935	COG0702	epimerase
BB788_RS17940	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
BB788_RS17945	COG3023	N-Acetylmuramoyl-L-alanine amidase
BB788_RS17950	COG5001	Diguanylate cyclase
BB788_RS17950	COG4251	negative regulation of phosphorylation
BB788_RS17950	COG2203	Gaf domain
BB788_RS17950	COG3706	GGDEF domain
BB788_RS17970	COG1126	abc transporter atp-binding protein
BB788_RS17975	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BB788_RS17980	COG4215	(ABC) transporter
BB788_RS17985	COG4160	amino acid transport
BB788_RS17990	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BB788_RS17995	COG5002	protein histidine kinase activity
BB788_RS18000	COG0745	RESPONSE REGULATOR receiver
BB788_RS18015	COG1177	transmembrane transport
BB788_RS18020	COG1176	ABC-type spermidine putrescine transport system, permease component I
BB788_RS18025	COG3842	ATPase activity
BB788_RS18030	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
BB788_RS18045	COG0778	Nitroreductase
BB788_RS18075	COG3226	Transcriptional regulator
BB788_RS18080	COG0738	Major facilitator superfamily
BB788_RS18085	COG0561	phosphatase activity
BB788_RS18090	COG2814	Major facilitator Superfamily
BB788_RS18100	COG0671	phosphoesterase, PA-phosphatase related
BB788_RS18105	COG1349	DNA-binding transcription factor activity
BB788_RS18110	COG1686	Belongs to the peptidase S11 family
BB788_RS18120	COG0625	glutathione transferase activity
BB788_RS18125	COG2133	pyrroloquinoline quinone binding
BB788_RS18135	COG2223	nitrite transmembrane transporter activity
BB788_RS18155	COG0747	negative chemotaxis
BB788_RS18170	COG0303	'Molybdopterin
BB788_RS18175	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
BB788_RS18180	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
BB788_RS18185	COG1882	Formate acetyltransferase
BB788_RS18190	COG0561	phosphatase activity
BB788_RS18200	COG1609	Transcriptional regulator
BB788_RS18205	COG2271	Major facilitator Superfamily
BB788_RS18215	COG0488	(ABC) transporter
BB788_RS18225	COG1376	ErfK ybiS ycfS ynhG family protein
BB788_RS18230	COG2188	Transcriptional regulator
BB788_RS18235	COG2723	6-phospho-beta-galactosidase activity
BB788_RS18240	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
BB788_RS18255	COG2194	sulfuric ester hydrolase activity
BB788_RS18260	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
BB788_RS18280	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BB788_RS18285	COG0765	amino acid transport
BB788_RS18290	COG1126	abc transporter atp-binding protein
BB788_RS18295	COG0668	transmembrane transport
BB788_RS18305	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
BB788_RS18315	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
BB788_RS18325	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
BB788_RS18330	COG1199	ATP-dependent helicase activity
BB788_RS18335	COG0513	Belongs to the DEAD box helicase family
BB788_RS18340	COG3958	Transketolase
BB788_RS18345	COG3959	Transketolase, thiamine diphosphate binding domain
BB788_RS18350	COG1028	Short-chain dehydrogenase reductase Sdr
BB788_RS18355	COG2271	Major facilitator Superfamily
BB788_RS18365	COG0583	DNA-binding transcription factor activity
BB788_RS18370	COG1309	transcriptional regulator
BB788_RS18375	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BB788_RS18380	COG1131	(ABC) transporter
BB788_RS18390	COG0842	Transport permease protein
BB788_RS18400	COG3568	Endonuclease Exonuclease Phosphatase
BB788_RS18405	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BB788_RS18410	COG0392	lysyltransferase activity
BB788_RS18415	COG0670	Belongs to the BI1 family
BB788_RS18420	COG0314	molybdopterin synthase activity
BB788_RS18425	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
BB788_RS18435	COG0521	Mo-molybdopterin cofactor biosynthetic process
BB788_RS18460	COG0745	RESPONSE REGULATOR receiver
BB788_RS18465	COG0642	Histidine kinase
BB788_RS18495	COG2226	methyltransferase
BB788_RS18515	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
BB788_RS18520	COG1881	PFAM PEBP family protein
BB788_RS18555	COG4677	pectinesterase activity
BB788_RS18565	COG0589	response to stress
BB788_RS18570	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BB788_RS18605	COG0789	Transcriptional regulator
BB788_RS18610	COG2200	EAL domain
BB788_RS18635	COG0561	phosphatase activity
BB788_RS18645	COG4149	molybdate abc transporter
BB788_RS18650	COG0725	ABC transporter, periplasmic molybdate-binding protein
BB788_RS18660	COG3585	molybdate ion transport
BB788_RS18660	COG2005	Transcriptional regulator
BB788_RS18665	COG1119	ATPase activity
BB788_RS18670	COG1119	ATPase activity
BB788_RS18685	COG1085	galactose-1-phosphate uridylyltransferase
BB788_RS18695	COG2017	converts alpha-aldose to the beta-anomer
BB788_RS18705	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
BB788_RS18720	COG3201	nicotinamide mononucleotide transporter
BB788_RS18725	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
BB788_RS18770	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
BB788_RS18775	COG2885	chlorophyll binding
BB788_RS18785	COG3064	Membrane
BB788_RS18790	COG0848	biopolymer transport protein
BB788_RS18795	COG0811	peptide transport
BB788_RS18800	COG0824	Thioesterase
BB788_RS18805	COG3790	cyd operon protein YbgE
BB788_RS18810	COG4890	Cyd operon protein YbgT
BB788_RS18815	COG1294	oxidase, subunit
BB788_RS18820	COG1271	oxidase subunit
BB788_RS18835	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
BB788_RS18845	COG0508	dehydrogenase complex catalyzes the overall conversion of
BB788_RS18850	COG0567	Dehydrogenase, E1 component
BB788_RS18855	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
BB788_RS18860	COG1053	succinate dehydrogenase
BB788_RS18865	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
BB788_RS18870	COG2009	succinate dehydrogenase
BB788_RS18920	COG1984	allophanate hydrolase subunit 2
BB788_RS18925	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
BB788_RS18940	COG0415	Belongs to the DNA photolyase family
BB788_RS18970	COG2205	protein histidine kinase activity
BB788_RS18975	COG0745	RESPONSE REGULATOR receiver
BB788_RS18985	COG0033	Phosphoglucomutase
BB788_RS19000	COG0596	Alpha beta hydrolase
BB788_RS19015	COG0735	belongs to the Fur family
BB788_RS19060	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
BB788_RS19065	COG1940	carbohydrate kinase activity
BB788_RS19065	COG1846	Transcriptional regulator
BB788_RS19070	COG0647	UMP catabolic process
BB788_RS19075	COG0367	asparagine synthase
BB788_RS19115	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
BB788_RS19125	COG1702	phosphate starvation-inducible protein PhoH
BB788_RS19150	COG0765	amino acid transport
BB788_RS19155	COG0765	amino acid transport
BB788_RS19160	COG1126	abc transporter atp-binding protein
BB788_RS19180	COG2888	peptidyl-tyrosine sulfation
BB788_RS19195	COG1466	dna polymerase III delta subunit
BB788_RS19215	COG0799	negative regulation of ribosome biogenesis
BB788_RS19225	COG0768	penicillin binding
BB788_RS19230	COG0772	Belongs to the SEDS family
BB788_RS19235	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
BB788_RS19240	COG1686	Belongs to the peptidase S11 family
BB788_RS19255	COG0583	DNA-binding transcription factor activity
BB788_RS19270	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
BB788_RS19290	COG3069	C4-dicarboxylate transmembrane transporter activity
BB788_RS19295	COG3719	Belongs to the RNase T2 family
BB788_RS19300	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
BB788_RS19320	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
BB788_RS19325	COG0583	DNA-binding transcription factor activity
BB788_RS19330	COG3969	phosphoadenosine phosphosulfate
BB788_RS19335	COG1475	DNA binding
BB788_RS19340	COG0436	Aminotransferase
BB788_RS19365	COG1129	ABC transporter
BB788_RS19370	COG1172	Belongs to the binding-protein-dependent transport system permease family
BB788_RS19375	COG1172	Belongs to the binding-protein-dependent transport system permease family
BB788_RS19385	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
BB788_RS19400	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
BB788_RS19410	COG0402	S-adenosylhomocysteine deaminase activity
BB788_RS19420	COG0483	inositol monophosphate 1-phosphatase activity
BB788_RS19425	COG2271	Major facilitator Superfamily
BB788_RS19455	COG1172	Belongs to the binding-protein-dependent transport system permease family
BB788_RS19460	COG1129	ABC transporter
BB788_RS19465	COG0371	Dehydrogenase
BB788_RS19470	COG1028	Short-chain dehydrogenase reductase Sdr
BB788_RS19485	COG2879	small protein
BB788_RS19490	COG1966	Carbon starvation protein
BB788_RS19500	COG1028	Short-chain dehydrogenase reductase Sdr
BB788_RS19505	COG3433	isochorismatase activity
BB788_RS19505	COG1535	isochorismatase
BB788_RS19510	COG1021	2,3-dihydroxybenzoate-AMP ligase
BB788_RS19515	COG1169	isochorismate synthase
BB788_RS19520	COG4592	Periplasmic binding protein
BB788_RS19530	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BB788_RS19535	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BB788_RS19540	COG1120	ATPase activity
BB788_RS19545	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
BB788_RS19545	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BB788_RS19550	COG3251	PFAM MbtH domain protein
BB788_RS19555	COG2382	esterase
BB788_RS19565	COG4771	TonB-dependent receptor
BB788_RS19570	COG2977	Belongs to the P-Pant transferase superfamily
BB788_RS19575	COG3958	Transketolase
BB788_RS19580	COG3959	Transketolase, thiamine diphosphate binding domain
BB788_RS19590	COG2390	Transcriptional regulator
BB788_RS19595	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
BB788_RS19600	COG1879	ABC-type sugar transport system periplasmic component
BB788_RS19610	COG1129	ABC transporter
BB788_RS19615	COG1172	Belongs to the binding-protein-dependent transport system permease family
BB788_RS19625	COG1028	Short-chain dehydrogenase reductase Sdr
BB788_RS19635	COG0583	DNA-binding transcription factor activity
BB788_RS19640	COG0668	transmembrane transport
BB788_RS19650	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
BB788_RS19680	COG0747	negative chemotaxis
BB788_RS19685	COG0601	transmembrane transport
BB788_RS19690	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BB788_RS19695	COG0444	Belongs to the ABC transporter superfamily
BB788_RS19700	COG4608	Belongs to the ABC transporter superfamily
BB788_RS19710	COG2801	Transposase and inactivated derivatives
BB788_RS19725	COG0667	Aldo Keto reductase
BB788_RS19730	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BB788_RS19735	COG1473	amidohydrolase
BB788_RS19770	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BB788_RS19775	COG1120	ATPase activity
BB788_RS19780	COG1566	PFAM secretion protein HlyD family protein
BB788_RS19835	COG4211	Belongs to the binding-protein-dependent transport system permease family
BB788_RS19840	COG1129	ABC transporter
BB788_RS19855	COG0673	inositol 2-dehydrogenase activity
BB788_RS19885	COG3104	oligopeptide transport
BB788_RS19890	COG1982	Orn Lys Arg decarboxylase major
BB788_RS19895	COG0531	amino acid
BB788_RS19905	COG3710	Transcriptional regulator
BB788_RS19915	COG1560	Kdo2-lipid A biosynthetic process
BB788_RS19965	COG2501	S4 domain
BB788_RS19975	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
BB788_RS19995	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
BB788_RS20000	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
BB788_RS20020	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
BB788_RS20025	COG4181	ATPase activity
BB788_RS20030	COG2755	lipolytic protein G-D-S-L family
BB788_RS20035	COG0300	oxidoreductase activity
BB788_RS20040	COG3118	belongs to the thioredoxin family
BB788_RS20045	COG0390	transport system, permease component
BB788_RS20050	COG4619	ABC transporter
BB788_RS20055	COG0330	HflC and HflK could
BB788_RS20060	COG1585	Membrane protein implicated in regulation of membrane protease activity
BB788_RS20075	COG3735	TraB family
BB788_RS20080	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
BB788_RS20090	COG2223	nitrite transmembrane transporter activity
BB788_RS20105	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
BB788_RS20105	COG4651	solute:proton antiporter activity
BB788_RS20110	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BB788_RS20150	COG2832	Protein of unknown function (DUF454)
BB788_RS20155	COG3923	Primosomal replication protein n
BB788_RS20170	COG3264	Mechanosensitive ion channel
BB788_RS20170	COG1196	nuclear chromosome segregation
BB788_RS20175	COG1309	transcriptional regulator
BB788_RS20180	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BB788_RS20185	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BB788_RS20200	COG0110	maltose O-acetyltransferase activity
BB788_RS20250	COG1874	Beta-galactosidase
BB788_RS20255	COG3867	Arabinogalactan endo-beta-1,4-galactanase
BB788_RS20260	COG3833	ABC-type maltose transport systems, permease component
BB788_RS20265	COG1175	transmembrane transport
BB788_RS20270	COG2182	Extracellular solute-binding protein
BB788_RS20285	COG4943	cyclic-guanylate-specific phosphodiesterase activity
BB788_RS20300	COG2364	Membrane
BB788_RS20330	COG3695	enzyme binding
BB788_RS20335	COG3126	Type III secretion system lipoprotein chaperone (YscW)
BB788_RS20340	COG1946	Acyl-CoA thioesterase
BB788_RS20345	COG0004	ammonium transporteR
BB788_RS20350	COG0347	Belongs to the P(II) protein family
BB788_RS20355	COG1132	(ABC) transporter
BB788_RS20360	COG1132	(ABC) transporter
BB788_RS20365	COG1522	sequence-specific DNA binding
BB788_RS20380	COG4533	DNA binding
BB788_RS20390	COG0824	Thioesterase
BB788_RS20395	COG1555	photosystem II stabilization
BB788_RS20400	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
BB788_RS20405	COG0776	regulation of translation
BB788_RS20410	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
BB788_RS20435	COG0271	Belongs to the BolA IbaG family
BB788_RS20440	COG3056	Lipoprotein
BB788_RS20445	COG2223	nitrite transmembrane transporter activity
BB788_RS20450	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
BB788_RS20455	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
BB788_RS20460	COG1845	cytochrome c oxidase, subunit III
BB788_RS20465	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
BB788_RS20480	COG1414	Transcriptional regulator
BB788_RS20490	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
BB788_RS20495	COG1053	succinate dehydrogenase
BB788_RS20520	COG0673	inositol 2-dehydrogenase activity
BB788_RS20525	COG2814	Major facilitator Superfamily
BB788_RS20535	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
BB788_RS20540	COG0693	protein deglycase activity
BB788_RS20560	COG0142	geranyltranstransferase activity
BB788_RS20570	COG0667	Aldo Keto reductase
BB788_RS20575	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
BB788_RS20580	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
BB788_RS20595	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
BB788_RS20595	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
BB788_RS20605	COG4238	major outer membrane lipoprotein
BB788_RS20625	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
BB788_RS20630	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
BB788_RS20635	COG1862	Preprotein translocase
BB788_RS20660	COG0450	alkyl hydroperoxide reductase
BB788_RS20670	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
BB788_RS20685	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BB788_RS20695	COG1228	amidohydrolase
BB788_RS20705	COG1335	isochorismatase
BB788_RS20710	COG0583	DNA-binding transcription factor activity
BB788_RS20715	COG0366	Alpha amylase catalytic
BB788_RS20740	COG0420	3'-5' exonuclease activity
BB788_RS20745	COG0419	ATPase involved in DNA repair
BB788_RS20750	COG1940	carbohydrate kinase activity
BB788_RS20765	COG4126	flavin adenine dinucleotide binding
BB788_RS20775	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
BB788_RS20780	COG3416	Protein conserved in bacteria
BB788_RS20790	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
BB788_RS20800	COG1785	Belongs to the alkaline phosphatase family
BB788_RS20840	COG1133	In Escherichia coli SbmA is involved in uptake of microcin J25
BB788_RS20845	COG1335	isochorismatase
BB788_RS20850	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
BB788_RS20855	COG0113	porphobilinogen synthase activity
BB788_RS20865	COG2175	clavaminate synthase activity
BB788_RS20870	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BB788_RS20875	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
BB788_RS20880	COG4521	taurine ABC transporter
BB788_RS20885	COG2040	homocysteine
BB788_RS20890	COG0833	amino acid
BB788_RS20905	COG4303	Ethanolamine ammonia lyase large subunit
BB788_RS20910	COG4302	ethanolamine ammonia-lyase activity
BB788_RS20950	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BB788_RS20955	COG1126	abc transporter atp-binding protein
BB788_RS20960	COG4597	amino acid ABC transporter
BB788_RS20965	COG0765	amino acid transport
BB788_RS20980	COG3188	usher protein
BB788_RS21005	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
BB788_RS21015	COG3639	organic phosphonate transmembrane transporter activity
BB788_RS21045	COG0791	NLP P60 protein
BB788_RS21085	COG3188	usher protein
BB788_RS21090	COG3121	Chaperone
BB788_RS21095	COG3539	Fimbrial protein
BB788_RS21115	COG3710	Transcriptional regulator
BB788_RS21145	COG2200	EAL domain
BB788_RS21165	COG3121	Chaperone
BB788_RS21190	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
BB788_RS21210	COG0579	oxidoreductase
BB788_RS21215	COG1012	belongs to the aldehyde dehydrogenase family
BB788_RS21220	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
BB788_RS21225	COG1113	amino acid transport
BB788_RS21230	COG1802	Transcriptional regulator
BB788_RS21250	COG2195	Cleaves the N-terminal amino acid of tripeptides
BB788_RS21255	COG0454	-acetyltransferase
BB788_RS21270	COG2991	Protein conserved in bacteria
BB788_RS21285	COG1347	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
BB788_RS21290	COG2869	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
BB788_RS21310	COG3034	peptidoglycan biosynthetic process
BB788_RS21315	COG0121	glutamine amidotransferase
BB788_RS21325	COG1960	acyl-CoA dehydrogenase activity
BB788_RS21330	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
BB788_RS21340	COG0583	DNA-binding transcription factor activity
BB788_RS21350	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
BB788_RS21360	COG2226	methyltransferase
BB788_RS21370	COG0741	lytic transglycosylase activity
BB788_RS21370	COG1388	LysM domain
BB788_RS21375	COG2226	methyltransferase
BB788_RS21385	COG2814	Major facilitator Superfamily
BB788_RS21390	COG0583	DNA-binding transcription factor activity
BB788_RS21395	COG0656	L-ascorbic acid biosynthetic process
BB788_RS21430	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
BB788_RS21440	COG2011	ABC-type metal ion transport system permease component
BB788_RS21445	COG1464	Belongs to the NlpA lipoprotein family
BB788_RS21455	COG1720	tRNA m6t6A37 methyltransferase activity
BB788_RS21465	COG0791	NLP P60 protein
BB788_RS21470	COG3015	lipoprotein NlpE involved in copper resistance
BB788_RS21475	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
BB788_RS21490	COG4568	rho-dependent transcription termination
BB788_RS21500	COG0346	lactoylglutathione lyase activity
BB788_RS21505	COG1982	Orn Lys Arg decarboxylase major
BB788_RS21515	COG0587	DNA-directed DNA polymerase activity
BB788_RS21545	COG2825	PFAM Outer membrane chaperone Skp (OmpH)
BB788_RS21555	COG0750	zinc metalloprotease
BB788_RS21560	COG0575	Belongs to the CDS family
BB788_RS21575	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
BB788_RS21600	COG0024	Methionine aminopeptidase
BB788_RS21605	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
BB788_RS21620	COG3835	regulator
BB788_RS21625	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
BB788_RS21645	COG2860	membrane
BB788_RS21665	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BB788_RS21670	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
BB788_RS21675	COG1120	ATPase activity
BB788_RS21680	COG4774	siderophore transport
BB788_RS21685	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
BB788_RS21780	COG1643	Atp-dependent helicase
BB788_RS21785	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
BB788_RS21805	COG0617	tRNA 3'-terminal CCA addition
BB788_RS21810	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
BB788_RS21830	COG0726	polysaccharide deacetylase
BB788_RS21835	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
BB788_RS21840	COG0842	Transport permease protein
BB788_RS21845	COG1131	(ABC) transporter
BB788_RS21850	COG0288	reversible hydration of carbon dioxide
BB788_RS21865	COG4993	Dehydrogenase
BB788_RS21870	COG2132	Multicopper oxidase
BB788_RS21915	COG3064	Membrane
BB788_RS21930	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
BB788_RS21935	COG0508	dehydrogenase complex catalyzes the overall conversion of
BB788_RS21940	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
BB788_RS21945	COG2186	Transcriptional regulator
BB788_RS21955	COG1113	amino acid transport
BB788_RS21960	COG2211	Major facilitator Superfamily
BB788_RS21965	COG3940	Belongs to the glycosyl hydrolase 43 family
BB788_RS21970	COG3725	Membrane protein required for beta-lactamase induction
BB788_RS21975	COG3023	N-Acetylmuramoyl-L-alanine amidase
BB788_RS21985	COG4969	Belongs to the N-Me-Phe pilin family
BB788_RS21990	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
BB788_RS21995	COG1459	type II secretion system
BB788_RS22025	COG0494	nUDIX hydrolase
BB788_RS22045	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
BB788_RS22050	COG0849	cell division
BB788_RS22075	COG0772	Belongs to the SEDS family
BB788_RS22090	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
BB788_RS22095	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
BB788_RS22100	COG0768	penicillin binding
BB788_RS22125	COG1609	Transcriptional regulator
BB788_RS22135	COG0028	Belongs to the TPP enzyme family
BB788_RS22190	COG0738	Major facilitator superfamily
BB788_RS22200	COG0583	DNA-binding transcription factor activity
BB788_RS22205	COG2271	Major facilitator Superfamily
BB788_RS22210	COG2814	Major facilitator Superfamily
BB788_RS22235	COG1178	ABC-type Fe3 transport system permease component
BB788_RS22245	COG0586	Pfam SNARE associated Golgi protein
BB788_RS22270	COG0235	Class ii aldolase
BB788_RS22275	COG0417	DNA replication proofreading
BB788_RS22285	COG0564	pseudouridine synthase activity
BB788_RS22300	COG3493	citrate carrier protein
BB788_RS22315	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
BB788_RS22320	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
BB788_RS22330	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
BB788_RS22385	COG0505	Belongs to the CarA family
BB788_RS22405	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
BB788_RS22430	COG1047	Peptidyl-prolyl cis-trans
BB788_RS22445	COG0196	riboflavin kinase activity
BB788_RS22465	COG0583	DNA-binding transcription factor activity
BB788_RS22490	COG4735	regulation of single-species biofilm formation
BB788_RS22495	COG1584	GPR1 FUN34 yaaH family protein
BB788_RS22500	COG0477	Major facilitator Superfamily
BB788_RS22505	COG0521	Mo-molybdopterin cofactor biosynthetic process
BB788_RS22510	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
BB788_RS22515	COG1115	amino acid carrier protein
BB788_RS22530	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
BB788_RS22540	COG0527	aspartate kinase activity
BB788_RS22540	COG0460	homoserine dehydrogenase
BB788_RS22555	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
BB788_RS22565	COG0745	RESPONSE REGULATOR receiver
BB788_RS22570	COG4452	Inner membrane protein CreD
BB788_RS22575	COG2205	protein histidine kinase activity
BB788_RS22580	COG0745	RESPONSE REGULATOR receiver
BB788_RS22585	COG3045	CreA protein
BB788_RS22590	COG2207	Transcriptional regulator
BB788_RS22590	COG3708	Transcriptional regulator
BB788_RS22610	COG0741	lytic transglycosylase activity
BB788_RS22620	COG0488	(ABC) transporter
BB788_RS22630	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
BB788_RS22635	COG0560	Phosphoserine phosphatase
BB788_RS22645	COG3726	membrane protein affecting hemolysin expression
BB788_RS22675	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
BB788_RS22680	COG0084	hydrolase, TatD family'
BB788_RS22685	COG4667	esterase of the alpha-beta hydrolase superfamily
BB788_RS22695	COG2823	Periplasmic or secreted lipoprotein
BB788_RS22705	COG1011	Hydrolase
BB788_RS22710	COG0456	acetyltransferase
BB788_RS22715	COG3050	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is
BB788_RS22750	COG3706	GGDEF domain
BB788_RS22755	COG4114	ferric iron reductase
BB788_RS22760	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BB788_RS22760	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BB788_RS22765	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
BB788_RS22770	COG2197	response regulator
BB788_RS22775	COG2197	response regulator
BB788_RS22795	COG2966	Psort location CytoplasmicMembrane, score
BB788_RS22810	COG1484	DNA-dependent DNA replication
BB788_RS22825	COG5464	transposase or invertase
BB788_RS22835	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
BB788_RS22840	COG3716	PTS system mannose fructose sorbose family IID component
BB788_RS22845	COG3715	PTS system
BB788_RS22860	COG3933	PFAM sigma-54 factor interaction domain-containing protein
BB788_RS22860	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
BB788_RS22865	COG1214	PFAM Peptidase M22, glycoprotease
BB788_RS22865	COG0456	acetyltransferase
BB788_RS22875	COG1737	Transcriptional regulator
BB788_RS22880	COG0800	Aldolase
BB788_RS22885	COG3734	2-keto-3-deoxy-galactonokinase
BB788_RS22890	COG4145	pantothenate transmembrane transporter activity
BB788_RS22900	COG3653	N-Acyl-D-aspartate D-glutamate deacylase
BB788_RS22930	COG1846	Transcriptional regulator
BB788_RS22940	COG0179	Fumarylacetoacetate (FAA) hydrolase
BB788_RS22950	COG1012	belongs to the aldehyde dehydrogenase family
BB788_RS22955	COG3384	dioxygenase
BB788_RS22965	COG3971	2-oxopent-4-enoate hydratase activity
BB788_RS22985	COG2368	4-hydroxyphenylacetate
BB788_RS22990	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
BB788_RS22995	COG1966	Carbon starvation protein
BB788_RS23000	COG2879	small protein
BB788_RS23005	COG0523	cobalamin synthesis protein
BB788_RS23015	COG1012	belongs to the aldehyde dehydrogenase family
BB788_RS23020	COG5464	transposase or invertase
BB788_RS23025	COG2207	Transcriptional regulator
BB788_RS23025	COG1917	Cupin 2, conserved barrel domain protein
BB788_RS23035	COG2733	membrane
BB788_RS23050	COG1775	2-hydroxyglutaryl-CoA dehydratase, D-component
BB788_RS23055	COG1924	4 iron, 4 sulfur cluster binding
BB788_RS23070	COG1566	PFAM secretion protein HlyD family protein
BB788_RS23080	COG5457	Domain of unknown function (DUF1127)
BB788_RS23085	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BB788_RS23105	COG0732	type I restriction modification DNA specificity domain
BB788_RS23120	COG0583	DNA-binding transcription factor activity
BB788_RS23125	COG2249	NAD(P)H dehydrogenase (quinone) activity
BB788_RS23160	COG1454	alcohol dehydrogenase
BB788_RS23160	COG1012	belongs to the aldehyde dehydrogenase family
BB788_RS23175	COG1882	Formate acetyltransferase
BB788_RS23180	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
BB788_RS23190	COG4869	propanediol catabolic process
BB788_RS23215	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BB788_RS23220	COG0842	Transport permease protein
BB788_RS23220	COG1129	ABC transporter
BB788_RS23225	COG0842	Transport permease protein
BB788_RS23260	COG2850	peptidyl-arginine hydroxylation
BB788_RS23275	COG5002	protein histidine kinase activity
BB788_RS23280	COG0745	RESPONSE REGULATOR receiver
BB788_RS23290	COG1538	Outer membrane efflux protein
BB788_RS23295	COG5569	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BB788_RS23300	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BB788_RS23305	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BB788_RS23315	COG3040	lipid binding
BB788_RS23320	COG0789	Transcriptional regulator
BB788_RS23325	COG3631	Ketosteroid isomerase-related protein
BB788_RS23330	COG0300	oxidoreductase activity
BB788_RS23345	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
BB788_RS23365	COG3272	Protein of unknown function (DUF1722)
BB788_RS23370	COG4580	involved in the transport of maltose and maltodextrins
BB788_RS23380	COG2115	Belongs to the xylose isomerase family
BB788_RS23385	COG2211	Major facilitator Superfamily
BB788_RS23390	COG3507	Belongs to the glycosyl hydrolase 43 family
BB788_RS23435	COG1112	Superfamily I DNA and RNA helicases and helicase subunits
BB788_RS23435	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BB788_RS23445	COG2963	transposase activity
BB788_RS23510	COG0582	viral genome integration into host DNA
BB788_RS23525	COG0288	reversible hydration of carbon dioxide
BB788_RS23530	COG0659	secondary active sulfate transmembrane transporter activity
BB788_RS23535	COG1064	alcohol dehydrogenase
BB788_RS23540	COG1175	transmembrane transport
BB788_RS23545	COG0395	ABC-type sugar transport system, permease component
BB788_RS23550	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
BB788_RS23555	COG3842	ATPase activity
BB788_RS23570	COG1082	Xylose isomerase domain protein TIM barrel
BB788_RS23580	COG3962	Belongs to the TPP enzyme family
BB788_RS23590	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BB788_RS23595	COG0837	glucose binding
BB788_RS23595	COG1737	Transcriptional regulator
BB788_RS23615	COG3718	enzyme involved in inositol metabolism
BB788_RS23630	COG0433	COG0433 Predicted ATPase
BB788_RS23635	COG0795	lipopolysaccharide-transporting ATPase activity
BB788_RS23640	COG0795	lipopolysaccharide-transporting ATPase activity
BB788_RS23655	COG2927	DNA polymerase III (CHI subunit)
BB788_RS23660	COG0525	valine-tRNA ligase activity
BB788_RS23685	COG2731	YhcH YjgK YiaL family protein
BB788_RS23725	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BB788_RS23725	COG1263	PTS System
BB788_RS23730	COG0366	Alpha amylase catalytic
BB788_RS23735	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BB788_RS23740	COG1486	melibiose metabolic process
BB788_RS23770	COG0602	queuosine metabolic process
BB788_RS23775	COG2026	Addiction module toxin, RelE StbE family
BB788_RS23780	COG3077	Addiction module antitoxin, RelB DinJ family
BB788_RS23790	COG2706	6-phosphogluconolactonase activity
BB788_RS23805	COG3964	amidohydrolase
BB788_RS23845	COG0312	modulator of DNA gyrase
BB788_RS23870	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
BB788_RS23880	COG1172	Belongs to the binding-protein-dependent transport system permease family
BB788_RS23885	COG1172	Belongs to the binding-protein-dependent transport system permease family
BB788_RS23890	COG1129	ABC transporter
BB788_RS23900	COG1879	ABC-type sugar transport system periplasmic component
BB788_RS23920	COG2105	PFAM AIG2 family protein
BB788_RS23925	COG2911	Protein conserved in bacteria
BB788_RS23930	COG0729	surface antigen
BB788_RS23965	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
BB788_RS23975	COG2801	Transposase and inactivated derivatives
BB788_RS24000	COG0861	Integral membrane protein TerC family
BB788_RS24020	COG1215	transferase activity, transferring glycosyl groups
BB788_RS24025	COG0726	polysaccharide deacetylase
BB788_RS24025	COG1649	PFAM Uncharacterised BCR, COG1649
BB788_RS24030	COG0457	Tetratricopeptide repeat
BB788_RS24065	COG1309	transcriptional regulator
BB788_RS24080	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
BB788_RS24085	COG1027	Aspartate ammonia-lyase
BB788_RS24095	COG3030	protein affecting phage T7 exclusion by the F plasmid
BB788_RS24100	COG0531	amino acid
BB788_RS24170	COG1509	lysine 2,3-aminomutase activity
BB788_RS24185	COG5510	response to toxic substance
BB788_RS24190	COG2076	Multidrug Resistance protein
BB788_RS24210	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
BB788_RS24215	COG1053	succinate dehydrogenase
BB788_RS24230	COG3264	Mechanosensitive ion channel
BB788_RS24230	COG1511	domain protein
BB788_RS24250	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BB788_RS24270	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
BB788_RS24275	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
BB788_RS24275	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
BB788_RS24280	COG0802	atpase or kinase
BB788_RS24285	COG0860	N-Acetylmuramoyl-L-alanine amidase
BB788_RS24305	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
BB788_RS24310	COG0330	HflC and HflK could
BB788_RS24315	COG0330	HflC and HflK could
BB788_RS24330	COG3242	Uncharacterized protein conserved in bacteria (DUF2065)
BB788_RS24345	COG0557	exoribonuclease II activity
BB788_RS24350	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
BB788_RS24355	COG1960	acyl-CoA dehydrogenase activity
BB788_RS24365	COG3650	response to hydrogen peroxide
BB788_RS24370	COG1073	alpha beta
BB788_RS24430	COG2965	DNA replication, synthesis of RNA primer
BB788_RS24435	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
BB788_RS24445	COG3061	Opacity-associated protein A
BB788_RS24450	COG0545	Peptidyl-prolyl cis-trans isomerase
BB788_RS24455	COG1113	amino acid transport
BB788_RS24465	COG0697	spore germination
BB788_RS24475	COG0702	epimerase
BB788_RS24480	COG1733	regulation of RNA biosynthetic process
BB788_RS24495	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
BB788_RS24520	COG1253	flavin adenine dinucleotide binding
BB788_RS24525	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
BB788_RS24530	COG1609	Transcriptional regulator
BB788_RS24535	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
BB788_RS24545	COG2801	Transposase and inactivated derivatives
BB788_RS24570	COG1486	melibiose metabolic process
BB788_RS24580	COG2169	Transcriptional regulator
BB788_RS24595	COG2824	Alkylphosphonate utilization operon protein PhnA
BB788_RS24600	COG2764	glyoxalase bleomycin resistance protein dioxygenase
BB788_RS24605	COG2188	Transcriptional regulator
BB788_RS24610	COG3624	Phosphonate C-P lyase system protein PhnG
BB788_RS24615	COG3625	alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase activity
BB788_RS24620	COG3626	phosphonate metabolism
BB788_RS24625	COG3627	carbon phosphorus lyase activity
BB788_RS24630	COG4107	phosphonate C-P lyase system protein PhnK
BB788_RS24635	COG4778	phosphonate C-P lyase system protein PhnL
BB788_RS24640	COG3454	Phosphonate metabolism
BB788_RS24650	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
BB788_RS24660	COG4191	Histidine kinase
BB788_RS24660	COG0784	Response regulator, receiver
BB788_RS24665	COG1129	ABC transporter
BB788_RS24670	COG1172	Belongs to the binding-protein-dependent transport system permease family
BB788_RS24705	COG3383	formate dehydrogenase (NAD+) activity
BB788_RS24710	COG3383	formate dehydrogenase (NAD+) activity
BB788_RS24715	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
BB788_RS24720	COG1301	dicarboxylic acid transport
BB788_RS24730	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
BB788_RS24740	COG3162	membrane
BB788_RS24780	COG1346	cytolysis
BB788_RS24785	COG1380	Effector of murein hydrolase LrgA
BB788_RS24790	COG0583	DNA-binding transcription factor activity
BB788_RS24795	COG0025	NhaP-type Na H and K H
BB788_RS24800	COG2252	PERMEase
BB788_RS24805	COG0625	glutathione transferase activity
BB788_RS24810	COG0789	Transcriptional regulator
BB788_RS24820	COG4943	cyclic-guanylate-specific phosphodiesterase activity
BB788_RS24855	COG1234	tRNA 3'-trailer cleavage
BB788_RS24860	COG1609	Transcriptional regulator
BB788_RS24865	COG0483	inositol monophosphate 1-phosphatase activity
BB788_RS24880	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
BB788_RS24905	COG4771	TonB-dependent receptor
BB788_RS24915	COG0741	lytic transglycosylase activity
BB788_RS24930	COG2315	Protein conserved in bacteria
BB788_RS24935	COG0432	Pfam Uncharacterised protein family UPF0047
BB788_RS24950	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
BB788_RS24955	COG0305	Participates in initiation and elongation during chromosome replication
BB788_RS24970	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
BB788_RS24985	COG0735	belongs to the Fur family
BB788_RS24990	COG3237	CsbD-like
BB788_RS25000	COG0534	Mate efflux family protein
BB788_RS25010	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
BB788_RS25085	COG0251	oxidation-reduction process
BB788_RS25095	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
BB788_RS25110	COG0527	aspartate kinase activity
BB788_RS25160	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
BB788_RS25170	COG0456	acetyltransferase
BB788_RS25210	COG0151	Belongs to the GarS family
BB788_RS25220	COG4191	Histidine kinase
BB788_RS25230	COG3678	ATP-independent chaperone mediated protein folding
BB788_RS25265	COG3160	Binds RpoD and negatively regulates RpoD-mediated transcription activation by preventing the interaction between the primary sigma factor RpoD with the catalytic core of the RNA polymerase and with promoter DNA. May be involved in replacement of the RNA polymerase sigma subunit from RpoD to RpoS during the transition from exponential growth to the stationary phase
BB788_RS25280	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
BB788_RS25285	COG2104	thiamine diphosphate biosynthetic process
BB788_RS25295	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
BB788_RS25305	COG3706	GGDEF domain
BB788_RS25315	COG1447	Phosphotransferase system cellobiose-specific component IIA
BB788_RS25320	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
BB788_RS25360	COG0250	Participates in transcription elongation, termination and antitermination
BB788_RS25440	COG4635	menaquinone-dependent protoporphyrinogen oxidase activity
BB788_RS25450	COG1739	Uncharacterized protein family UPF0029
BB788_RS25500	COG0805	protein transport
BB788_RS25520	COG3165	ubiquinone biosynthetic process from chorismate
BB788_RS25550	COG0583	DNA-binding transcription factor activity
BB788_RS25555	COG0697	spore germination
BB788_RS25560	COG0561	phosphatase activity
BB788_RS25565	COG2267	carboxylic ester hydrolase activity
BB788_RS25570	COG1280	lysine exporter protein (LysE YggA)
BB788_RS25580	COG1280	lysine exporter protein (LysE YggA)
BB788_RS25615	COG0210	DNA helicase
BB788_RS25620	COG1011	Hydrolase
BB788_RS25650	COG3072	Adenylate cyclase
BB788_RS25670	COG2959	enzyme of heme biosynthesis
BB788_RS25675	COG3071	HemY protein
BB788_RS25725	COG2244	polysaccharide biosynthetic process
BB788_RS25730	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
BB788_RS25735	COG0456	acetyltransferase
BB788_RS25740	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
BB788_RS25745	COG1088	dTDP-glucose 4,6-dehydratase activity
BB788_RS25750	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
BB788_RS25755	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
BB788_RS25765	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
BB788_RS25770	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
BB788_RS25780	COG3118	belongs to the thioredoxin family
BB788_RS25810	COG1811	Na channel or pump
BB788_RS25820	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
BB788_RS25825	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
BB788_RS25835	COG0583	DNA-binding transcription factor activity
BB788_RS25840	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
BB788_RS25855	COG3978	acetolactate synthase activity
BB788_RS25880	COG3085	chromosome segregation
BB788_RS25955	COG0583	DNA-binding transcription factor activity
BB788_RS25980	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
BB788_RS25995	COG3443	Belongs to the bacterial solute-binding protein 9 family
BB788_RS26000	COG2207	Transcriptional regulator
BB788_RS26010	COG0371	Dehydrogenase
BB788_RS26015	COG0697	spore germination
BB788_RS26025	COG0583	DNA-binding transcription factor activity
BB788_RS26035	COG0737	Belongs to the 5'-nucleotidase family
BB788_RS26045	COG0527	aspartate kinase activity
BB788_RS26045	COG0460	homoserine dehydrogenase
BB788_RS26050	COG0626	cystathionine gamma-synthase activity
BB788_RS26065	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
BB788_RS26075	COG1609	Transcriptional regulator
BB788_RS26080	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
BB788_RS26095	COG1575	Belongs to the MenA family. Type 1 subfamily
BB788_RS26115	COG3678	ATP-independent chaperone mediated protein folding
BB788_RS26120	COG0745	RESPONSE REGULATOR receiver
BB788_RS26125	COG2205	protein histidine kinase activity
BB788_RS26130	COG2258	MOSC domain
BB788_RS26135	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
BB788_RS26180	COG1129	ABC transporter
BB788_RS26185	COG1172	Belongs to the binding-protein-dependent transport system permease family
BB788_RS26190	COG1172	Belongs to the binding-protein-dependent transport system permease family
BB788_RS26195	COG1454	alcohol dehydrogenase
BB788_RS26205	COG2211	Major facilitator Superfamily
BB788_RS26265	COG0205	6-phosphofructokinase activity
BB788_RS26285	COG3383	formate dehydrogenase (NAD+) activity
BB788_RS26285	COG0243	molybdopterin cofactor binding
BB788_RS26290	COG3383	formate dehydrogenase (NAD+) activity
BB788_RS26290	COG0243	molybdopterin cofactor binding
BB788_RS26295	COG0437	4 iron, 4 sulfur cluster binding
BB788_RS26300	COG2864	formate dehydrogenase
BB788_RS26315	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
BB788_RS26325	COG0456	acetyltransferase
BB788_RS26340	COG1011	Hydrolase
BB788_RS26365	COG3852	Histidine kinase
BB788_RS26375	COG0635	Involved in the biosynthesis of porphyrin-containing compound
BB788_RS26400	COG0204	Acyl-transferase
BB788_RS26410	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
BB788_RS26415	COG3084	Protein conserved in bacteria
BB788_RS26425	COG1763	Mo-molybdopterin cofactor biosynthetic process
BB788_RS26455	COG2186	Transcriptional regulator
BB788_RS26460	COG0477	Major facilitator Superfamily
BB788_RS26465	COG1609	Transcriptional regulator
BB788_RS26470	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BB788_RS26480	COG1172	Belongs to the binding-protein-dependent transport system permease family
BB788_RS26485	COG1129	ABC transporter
BB788_RS26515	COG1522	sequence-specific DNA binding
BB788_RS26520	COG0716	FMN binding
BB788_RS26540	COG3312	ion transport
BB788_RS26605	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
BB788_RS26610	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
BB788_RS26615	COG0573	inorganic phosphate transmembrane transporter activity
BB788_RS26620	COG0581	inorganic phosphate transmembrane transporter activity
BB788_RS26625	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
BB788_RS26630	COG0704	Plays a role in the regulation of phosphate uptake
BB788_RS26645	COG2382	esterase
BB788_RS26650	COG0363	glucosamine-6-phosphate deaminase activity
BB788_RS26655	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
BB788_RS26665	COG2252	PERMEase
BB788_RS26670	COG0431	NADPH-dependent FMN reductase
BB788_RS26675	COG2091	lysine biosynthetic process via aminoadipic acid
BB788_RS26705	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
BB788_RS27310	COG1486	melibiose metabolic process
BB788_RS27325	COG2982	Protein involved in outer membrane biogenesis
BB788_RS27410	COG1494	fructose-1,6-bisphosphatase
BB788_RS27700	COG1620	l-lactate permease
BB788_RS27790	COG3276	selenocysteine insertion sequence binding
BB788_RS27810	COG0366	Alpha amylase catalytic
BB788_RS27835	COG4214	carbohydrate transport
BB788_RS28235	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
BB788_RS28495	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BB788_RS28495	COG1263	PTS System
BB788_RS28510	COG2982	Protein involved in outer membrane biogenesis
BB788_RS28520	COG2233	PERMEase
BB788_RS28560	COG1494	fructose-1,6-bisphosphatase
BB788_RS28640	COG1662	PFAM IS1 transposase
BB788_RS28640	COG3677	Transposase
BB788_RS28745	COG0438	transferase activity, transferring glycosyl groups
BB788_RS28830	COG4942	peptidase
BB788_RS28905	COG3276	selenocysteine insertion sequence binding
BB788_RS29055	COG0488	(ABC) transporter
BB788_RS29115	COG0187	DNA topoisomerase II activity
BB788_RS29175	COG2186	Transcriptional regulator
BB788_RS29300	COG2271	Major facilitator Superfamily
BB788_RS29315	COG2271	Major facilitator Superfamily
BB788_RS30430	COG2610	gluconate transmembrane transporter activity
BB788_RS30730	COG2186	Transcriptional regulator
BB788_RS30780	COG0823	Involved in the tonB-independent uptake of proteins
BB788_RS30890	COG0583	DNA-binding transcription factor activity
BB788_RS30945	COG3851	Histidine kinase
BB788_RS31075	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BB788_RS31075	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity