BB788_RS00005	SM00382	ATPases associated with a variety of cellular activities
BB788_RS00005	SM00760	Bacterial dnaA protein helix-turn-helix domain
BB788_RS00010	SM00480	DNA polymerase III beta subunit
BB788_RS00020	SM00387	Histidine kinase-like ATPases
BB788_RS00020	SM00433	TopoisomeraseII
BB788_RS00040	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BB788_RS00040	SM00895	BB788_RS00040
BB788_RS00055	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
BB788_RS00100	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BB788_RS00100	SM00866	BB788_RS00100
BB788_RS00190	SM00421	helix_turn_helix, Lux Regulon
BB788_RS00190	SM00448	cheY-homologous receiver domain
BB788_RS00195	SM00387	Histidine kinase-like ATPases
BB788_RS00215	SM00530	Helix-turn-helix XRE-family like proteins 
BB788_RS00245	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BB788_RS00245	SM00866	BB788_RS00245
BB788_RS00255	SM00382	ATPases associated with a variety of cellular activities
BB788_RS00290	SM00354	helix_turn _helix lactose operon repressor
BB788_RS00425	SM00342	helix_turn_helix, arabinose operon control protein
BB788_RS00445	SM00849	Metallo-beta-lactamase superfamily
BB788_RS00450	SM00342	helix_turn_helix, arabinose operon control protein
BB788_RS00455	SM00829	Enoylreductase
BB788_RS00470	SM00829	Enoylreductase
BB788_RS00585	SM00487	DEAD-like helicases superfamily
BB788_RS00585	SM00490	helicase superfamily c-terminal domain
BB788_RS00595	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BB788_RS00595	SM00954	Region found in RelA / SpoT proteins
BB788_RS00600	SM01409	BB788_RS00600
BB788_RS00605	SM00072	Guanylate kinase homologues.
BB788_RS00610	SM00532	Ligase N family
BB788_RS00640	SM00342	helix_turn_helix, arabinose operon control protein
BB788_RS00685	SM00382	ATPases associated with a variety of cellular activities
BB788_RS00735	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
BB788_RS00735	SM01232	BB788_RS00735
BB788_RS00815	SM00829	Enoylreductase
BB788_RS00840	SM00450	Rhodanese Homology Domain
BB788_RS00860	SM00971	Serine acetyltransferase, N-terminal
BB788_RS00875	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BB788_RS00875	SM00895	BB788_RS00875
BB788_RS00950	SM00642	Alpha-amylase domain
BB788_RS00960	SM00047	Lysozyme subfamily 2
BB788_RS00965	SM00342	helix_turn_helix, arabinose operon control protein
BB788_RS00975	SM00382	ATPases associated with a variety of cellular activities
BB788_RS01045	SM00382	ATPases associated with a variety of cellular activities
BB788_RS01050	SM00357	Cold shock protein domain
BB788_RS01055	SM00530	Helix-turn-helix XRE-family like proteins 
BB788_RS01090	SM00354	helix_turn _helix lactose operon repressor
BB788_RS01135	SM00248	ankyrin repeats
BB788_RS01180	SM00382	ATPases associated with a variety of cellular activities
BB788_RS01185	SM00382	ATPases associated with a variety of cellular activities
BB788_RS01270	SM00028	Tetratricopeptide repeats
BB788_RS01280	SM00052	Putative diguanylate phosphodiesterase
BB788_RS01280	SM00267	diguanylate cyclase
BB788_RS01280	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BB788_RS01325	SM00822	BB788_RS01325
BB788_RS01360	SM00014	Acid phosphatase homologues
BB788_RS01415	SM00382	ATPases associated with a variety of cellular activities
BB788_RS01420	SM00382	ATPases associated with a variety of cellular activities
BB788_RS01535	SM00382	ATPases associated with a variety of cellular activities
BB788_RS01535	SM00962	SRP54-type protein, GTPase domain
BB788_RS01535	SM00963	SRP54-type protein, helical bundle domain
BB788_RS01540	SM00382	ATPases associated with a variety of cellular activities
BB788_RS01555	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BB788_RS01605	SM00382	ATPases associated with a variety of cellular activities
BB788_RS01610	SM00382	ATPases associated with a variety of cellular activities
BB788_RS01640	SM00382	ATPases associated with a variety of cellular activities
BB788_RS01685	SM00354	helix_turn _helix lactose operon repressor
BB788_RS01705	SM00859	Semialdehyde dehydrogenase, NAD binding domain
BB788_RS01710	SM00642	Alpha-amylase domain
BB788_RS01715	SM00642	Alpha-amylase domain
BB788_RS01740	SM00530	Helix-turn-helix XRE-family like proteins 
BB788_RS01750	SM00450	Rhodanese Homology Domain
BB788_RS01760	SM00420	helix_turn_helix, Deoxyribose operon repressor
BB788_RS01760	SM01134	BB788_RS01760
BB788_RS01765	SM00421	helix_turn_helix, Lux Regulon
BB788_RS01820	SM00899	BB788_RS01820
BB788_RS01825	SM00316	Ribosomal protein S1-like RNA-binding domain
BB788_RS01825	SM00732	Likely ribonuclease with RNase H fold.
BB788_RS01835	SM00448	cheY-homologous receiver domain
BB788_RS01835	SM00862	Transcriptional regulatory protein, C terminal
BB788_RS01840	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BB788_RS01840	SM00387	Histidine kinase-like ATPases
BB788_RS01840	SM00388	His Kinase A (phosphoacceptor) domain
BB788_RS01860	SM00363	S4 RNA-binding domain
BB788_RS02010	SM00100	Cyclic nucleotide-monophosphate binding domain
BB788_RS02010	SM00419	helix_turn_helix, cAMP Regulatory protein
BB788_RS02045	SM00382	ATPases associated with a variety of cellular activities
BB788_RS02110	SM00838	Elongation factor G C-terminus
BB788_RS02110	SM00889	Elongation factor G, domain IV
BB788_RS02135	SM01403	BB788_RS02135
BB788_RS02155	SM01382	BB788_RS02155
BB788_RS02155	SM01383	BB788_RS02155
BB788_RS02170	SM00322	K homology RNA-binding domain
BB788_RS02190	SM01374	BB788_RS02190
BB788_RS02195	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
BB788_RS02260	SM00363	S4 RNA-binding domain
BB788_RS02260	SM01390	BB788_RS02260
BB788_RS02265	SM00662	RNA polymerases D
BB788_RS02280	SM00422	helix_turn_helix, mercury resistance
BB788_RS02425	SM00878	Biotin carboxylase C-terminal domain
BB788_RS02460	SM00052	Putative diguanylate phosphodiesterase
BB788_RS02460	SM00267	diguanylate cyclase
BB788_RS02490	SM00316	Ribosomal protein S1-like RNA-binding domain
BB788_RS02550	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BB788_RS02555	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BB788_RS02615	SM00729	Elongator protein 3, MiaB family, Radical SAM
BB788_RS02625	SM00829	Enoylreductase
BB788_RS02640	SM00073	Histidine Phosphotransfer domain
BB788_RS02640	SM00091	PAS domain
BB788_RS02640	SM00387	Histidine kinase-like ATPases
BB788_RS02640	SM00388	His Kinase A (phosphoacceptor) domain
BB788_RS02640	SM00448	cheY-homologous receiver domain
BB788_RS02680	SM00382	ATPases associated with a variety of cellular activities
BB788_RS02710	SM00382	ATPases associated with a variety of cellular activities
BB788_RS02785	SM01103	BB788_RS02785
BB788_RS02800	SM00382	ATPases associated with a variety of cellular activities
BB788_RS02860	SM00316	Ribosomal protein S1-like RNA-binding domain
BB788_RS02880	SM01387	BB788_RS02880
BB788_RS02890	SM00316	Ribosomal protein S1-like RNA-binding domain
BB788_RS02890	SM00322	K homology RNA-binding domain
BB788_RS02895	SM00028	Tetratricopeptide repeats
BB788_RS02900	SM00487	DEAD-like helicases superfamily
BB788_RS02900	SM00490	helicase superfamily c-terminal domain
BB788_RS03015	SM00859	Semialdehyde dehydrogenase, NAD binding domain
BB788_RS03025	SM00749	bacterial OsmY and nodulation domain
BB788_RS03055	SM00420	helix_turn_helix, Deoxyribose operon repressor
BB788_RS03055	SM01134	BB788_RS03055
BB788_RS03060	SM00829	Enoylreductase
BB788_RS03130	SM00420	helix_turn_helix, Deoxyribose operon repressor
BB788_RS03130	SM01134	BB788_RS03130
BB788_RS03140	SM00858	BB788_RS03140
BB788_RS03255	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BB788_RS03255	SM00895	BB788_RS03255
BB788_RS03270	SM00858	BB788_RS03270
BB788_RS03300	SM00530	Helix-turn-helix XRE-family like proteins 
BB788_RS03305	SM00873	B3/4 domain
BB788_RS03330	SM00382	ATPases associated with a variety of cellular activities
BB788_RS03350	SM01133	BB788_RS03350
BB788_RS03385	SM01120	BB788_RS03385
BB788_RS03395	SM01120	BB788_RS03395
BB788_RS03425	SM00091	PAS domain
BB788_RS03425	SM00382	ATPases associated with a variety of cellular activities
BB788_RS03490	SM00073	Histidine Phosphotransfer domain
BB788_RS03505	SM00062	Bacterial periplasmic substrate-binding proteins
BB788_RS03505	SM00387	Histidine kinase-like ATPases
BB788_RS03505	SM00388	His Kinase A (phosphoacceptor) domain
BB788_RS03510	SM00421	helix_turn_helix, Lux Regulon
BB788_RS03510	SM00448	cheY-homologous receiver domain
BB788_RS03530	SM00986	Uracil DNA glycosylase superfamily
BB788_RS03530	SM00987	UreE urease accessory protein, C-terminal domain 
BB788_RS03540	SM00400	zinc finger
BB788_RS03540	SM00493	BB788_RS03540
BB788_RS03540	SM00766	DNA primase DnaG DnaB-binding
BB788_RS03575	SM00988	UreE urease accessory protein, N-terminal domain
BB788_RS03610	SM01207	BB788_RS03610
BB788_RS03615	SM00905	Dihydroneopterin aldolase
BB788_RS03630	SM00287	Bacterial SH3 domain homologues
BB788_RS03635	SM01118	BB788_RS03635
BB788_RS03715	SM00387	Histidine kinase-like ATPases
BB788_RS03715	SM00433	TopoisomeraseII
BB788_RS03730	SM00387	Histidine kinase-like ATPases
BB788_RS03730	SM00388	His Kinase A (phosphoacceptor) domain
BB788_RS03735	SM00448	cheY-homologous receiver domain
BB788_RS03735	SM00862	Transcriptional regulatory protein, C terminal
BB788_RS03745	SM00342	helix_turn_helix, arabinose operon control protein
BB788_RS03745	SM00871	Bacterial transcription activator, effector binding domain
BB788_RS03750	SM00434	DNA Topoisomerase IV
BB788_RS03755	SM00563	Phosphate acyltransferases
BB788_RS03785	SM00342	helix_turn_helix, arabinose operon control protein
BB788_RS03890	SM00116	Domain in cystathionine beta-synthase and other proteins.
BB788_RS03930	SM00382	ATPases associated with a variety of cellular activities
BB788_RS04185	SM00530	Helix-turn-helix XRE-family like proteins 
BB788_RS04190	SM00357	Cold shock protein domain
BB788_RS04200	SM00530	Helix-turn-helix XRE-family like proteins 
BB788_RS04290	SM00478	endonuclease III
BB788_RS04290	SM00525	BB788_RS04290
BB788_RS04310	SM00729	Elongator protein 3, MiaB family, Radical SAM
BB788_RS04320	SM01152	BB788_RS04320
BB788_RS04335	SM00382	ATPases associated with a variety of cellular activities
BB788_RS04345	SM00421	helix_turn_helix, Lux Regulon
BB788_RS04350	SM00732	Likely ribonuclease with RNase H fold.
BB788_RS04375	SM00731	SprT homologues.
BB788_RS04435	SM00346	helix_turn_helix isocitrate lyase regulation
BB788_RS04495	SM00861	Transketolase, pyrimidine binding domain
BB788_RS04500	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
BB788_RS04575	SM01011	Aminopeptidase P, N-terminal domain
BB788_RS04640	SM01022	BB788_RS04640
BB788_RS04705	SM00257	Lysin motif
BB788_RS04760	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BB788_RS04815	SM00052	Putative diguanylate phosphodiesterase
BB788_RS04885	SM00347	helix_turn_helix multiple antibiotic resistance protein
BB788_RS04925	SM00052	Putative diguanylate phosphodiesterase
BB788_RS04930	SM00421	helix_turn_helix, Lux Regulon
BB788_RS04990	SM00354	helix_turn _helix lactose operon repressor
BB788_RS05005	SM00640	Glycosyl hydrolases family 32
BB788_RS05020	SM00382	ATPases associated with a variety of cellular activities
BB788_RS05055	SM00354	helix_turn _helix lactose operon repressor
BB788_RS05070	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BB788_RS05070	SM00895	BB788_RS05070
BB788_RS05080	SM00354	helix_turn _helix lactose operon repressor
BB788_RS05095	SM00563	Phosphate acyltransferases
BB788_RS05120	SM00927	DNA mismatch repair enzyme MutH
BB788_RS05135	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BB788_RS05185	SM00382	ATPases associated with a variety of cellular activities
BB788_RS05200	SM00646	BB788_RS05200
BB788_RS05225	SM00877	BB788_RS05225
BB788_RS05230	SM00877	BB788_RS05230
BB788_RS05270	SM00877	BB788_RS05270
BB788_RS05275	SM00877	BB788_RS05275
BB788_RS05305	SM00877	BB788_RS05305
BB788_RS05310	SM00877	BB788_RS05310
BB788_RS05320	SM00342	helix_turn_helix, arabinose operon control protein
BB788_RS05400	SM00382	ATPases associated with a variety of cellular activities
BB788_RS05435	SM00925	MltA specific insert domain
BB788_RS05475	SM00420	helix_turn_helix, Deoxyribose operon repressor
BB788_RS05475	SM01134	BB788_RS05475
BB788_RS05505	SM01007	Class II Aldolase and Adducin N-terminal domain
BB788_RS05515	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
BB788_RS05515	SM00475	5'-3' exonuclease
BB788_RS05520	SM00062	Bacterial periplasmic substrate-binding proteins
BB788_RS05520	SM00382	ATPases associated with a variety of cellular activities
BB788_RS05545	SM00382	ATPases associated with a variety of cellular activities
BB788_RS05575	SM00062	Bacterial periplasmic substrate-binding proteins
BB788_RS05625	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
BB788_RS05630	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
BB788_RS05640	SM00073	Histidine Phosphotransfer domain
BB788_RS05640	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BB788_RS05640	SM00387	Histidine kinase-like ATPases
BB788_RS05640	SM00388	His Kinase A (phosphoacceptor) domain
BB788_RS05640	SM00448	cheY-homologous receiver domain
BB788_RS05650	SM00954	Region found in RelA / SpoT proteins
BB788_RS05665	SM01192	BB788_RS05665
BB788_RS05665	SM01193	BB788_RS05665
BB788_RS05770	SM00257	Lysin motif
BB788_RS05820	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
BB788_RS05820	SM00534	ATPase domain of DNA mismatch repair MUTS family
BB788_RS05840	SM00382	ATPases associated with a variety of cellular activities
BB788_RS05900	SM00382	ATPases associated with a variety of cellular activities
BB788_RS05910	SM00354	helix_turn _helix lactose operon repressor
BB788_RS05955	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BB788_RS05955	SM00382	ATPases associated with a variety of cellular activities
BB788_RS06055	SM00354	helix_turn _helix lactose operon repressor
BB788_RS06080	SM00849	Metallo-beta-lactamase superfamily
BB788_RS06090	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BB788_RS06090	SM00382	ATPases associated with a variety of cellular activities
BB788_RS06095	SM00116	Domain in cystathionine beta-synthase and other proteins.
BB788_RS06100	SM00420	helix_turn_helix, Deoxyribose operon repressor
BB788_RS06100	SM01134	BB788_RS06100
BB788_RS06135	SM00382	ATPases associated with a variety of cellular activities
BB788_RS06155	SM00382	ATPases associated with a variety of cellular activities
BB788_RS06165	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
BB788_RS06210	SM00749	bacterial OsmY and nodulation domain
BB788_RS06235	SM00342	helix_turn_helix, arabinose operon control protein
BB788_RS06240	SM00917	LeuA allosteric (dimerisation) domain
BB788_RS06260	SM00347	helix_turn_helix multiple antibiotic resistance protein
BB788_RS06290	SM00382	ATPases associated with a variety of cellular activities
BB788_RS06320	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BB788_RS06345	SM00528	Domain in histone-like proteins of HNS family
BB788_RS06360	SM00450	Rhodanese Homology Domain
BB788_RS06365	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BB788_RS06380	SM00382	ATPases associated with a variety of cellular activities
BB788_RS06430	SM00421	helix_turn_helix, Lux Regulon
BB788_RS06435	SM00062	Bacterial periplasmic substrate-binding proteins
BB788_RS06455	SM01007	Class II Aldolase and Adducin N-terminal domain
BB788_RS06460	SM00382	ATPases associated with a variety of cellular activities
BB788_RS06465	SM00062	Bacterial periplasmic substrate-binding proteins
BB788_RS06505	SM00342	helix_turn_helix, arabinose operon control protein
BB788_RS06510	SM00903	Flavin reductase like domain
BB788_RS06575	SM01091	Transporter associated domain
BB788_RS06585	SM00382	ATPases associated with a variety of cellular activities
BB788_RS06585	SM00962	SRP54-type protein, GTPase domain
BB788_RS06585	SM00963	SRP54-type protein, helical bundle domain
BB788_RS06630	SM00267	diguanylate cyclase
BB788_RS06645	SM00830	Chorismate mutase type II
BB788_RS06655	SM00830	Chorismate mutase type II
BB788_RS06670	SM00363	S4 RNA-binding domain
BB788_RS06680	SM00382	ATPases associated with a variety of cellular activities
BB788_RS06680	SM01086	C-terminal, D2-small domain, of ClpB protein
BB788_RS06720	SM00155	Phospholipase D. Active site motifs.
BB788_RS06725	SM00881	CoA binding domain
BB788_RS06730	SM01144	BB788_RS06730
BB788_RS06740	SM00967	RNA 2'-O ribose methyltransferase substrate binding
BB788_RS06745	SM00986	Uracil DNA glycosylase superfamily
BB788_RS06745	SM00987	UreE urease accessory protein, C-terminal domain 
BB788_RS06755	SM00487	DEAD-like helicases superfamily
BB788_RS06755	SM00490	helicase superfamily c-terminal domain
BB788_RS06805	SM00358	Double-stranded RNA binding motif
BB788_RS06805	SM00535	Ribonuclease III family
BB788_RS06850	SM00062	Bacterial periplasmic substrate-binding proteins
BB788_RS06855	SM01211	BB788_RS06855
BB788_RS06860	SM00387	Histidine kinase-like ATPases
BB788_RS06860	SM00388	His Kinase A (phosphoacceptor) domain
BB788_RS06870	SM00382	ATPases associated with a variety of cellular activities
BB788_RS06870	SM00448	cheY-homologous receiver domain
BB788_RS06875	SM00938	Nitrogen regulatory protein P-II
BB788_RS06905	SM00028	Tetratricopeptide repeats
BB788_RS06975	SM00271	DnaJ molecular chaperone homology domain
BB788_RS07010	SM00450	Rhodanese Homology Domain
BB788_RS07015	SM01359	BB788_RS07015
BB788_RS07015	SM01360	BB788_RS07015
BB788_RS07025	SM00562	BB788_RS07025
BB788_RS07035	SM00530	Helix-turn-helix XRE-family like proteins 
BB788_RS07055	SM00564	beta-propeller repeat
BB788_RS07080	SM00116	Domain in cystathionine beta-synthase and other proteins.
BB788_RS07080	SM01240	BB788_RS07080
BB788_RS07115	SM00052	Putative diguanylate phosphodiesterase
BB788_RS07115	SM00267	diguanylate cyclase
BB788_RS07200	SM01130	BB788_RS07200
BB788_RS07270	SM00861	Transketolase, pyrimidine binding domain
BB788_RS07280	SM00919	Malic enzyme, NAD binding domain
BB788_RS07280	SM01274	BB788_RS07280
BB788_RS07285	SM00877	BB788_RS07285
BB788_RS07310	SM00877	BB788_RS07310
BB788_RS07355	SM00877	BB788_RS07355
BB788_RS07360	SM00877	BB788_RS07360
BB788_RS07365	SM00342	helix_turn_helix, arabinose operon control protein
BB788_RS07375	SM00646	BB788_RS07375
BB788_RS07425	SM00382	ATPases associated with a variety of cellular activities
BB788_RS07440	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BB788_RS07490	SM00771	ZipA, C-terminal domain (FtsZ-binding)
BB788_RS07495	SM00278	Helix-hairpin-helix DNA-binding motif class 1
BB788_RS07495	SM00292	breast cancer carboxy-terminal domain
BB788_RS07495	SM00532	Ligase N family
BB788_RS07560	SM00052	Putative diguanylate phosphodiesterase
BB788_RS07560	SM00267	diguanylate cyclase
BB788_RS07600	SM00448	cheY-homologous receiver domain
BB788_RS07600	SM00850	LytTr DNA-binding domain
BB788_RS07605	SM00387	Histidine kinase-like ATPases
BB788_RS07690	SM00463	Small MutS-related domain
BB788_RS07730	SM00825	Beta-ketoacyl synthase
BB788_RS07750	SM00859	Semialdehyde dehydrogenase, NAD binding domain
BB788_RS07800	SM00062	Bacterial periplasmic substrate-binding proteins
BB788_RS07805	SM00062	Bacterial periplasmic substrate-binding proteins
BB788_RS07820	SM00382	ATPases associated with a variety of cellular activities
BB788_RS07840	SM00905	Dihydroneopterin aldolase
BB788_RS07895	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BB788_RS07935	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
BB788_RS07940	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
BB788_RS07940	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
BB788_RS08010	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
BB788_RS08040	SM00852	Probable molybdopterin binding domain
BB788_RS08045	SM00346	helix_turn_helix isocitrate lyase regulation
BB788_RS08050	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
BB788_RS08115	SM00434	DNA Topoisomerase IV
BB788_RS08125	SM00421	helix_turn_helix, Lux Regulon
BB788_RS08125	SM00448	cheY-homologous receiver domain
BB788_RS08150	SM00342	helix_turn_helix, arabinose operon control protein
BB788_RS08160	SM00382	ATPases associated with a variety of cellular activities
BB788_RS08165	SM00116	Domain in cystathionine beta-synthase and other proteins.
BB788_RS08165	SM00924	MgtE intracellular N domain
BB788_RS08210	SM00420	helix_turn_helix, Deoxyribose operon repressor
BB788_RS08210	SM01134	BB788_RS08210
BB788_RS08235	SM00487	DEAD-like helicases superfamily
BB788_RS08235	SM00490	helicase superfamily c-terminal domain
BB788_RS08240	SM00363	S4 RNA-binding domain
BB788_RS08255	SM00382	ATPases associated with a variety of cellular activities
BB788_RS08275	SM00052	Putative diguanylate phosphodiesterase
BB788_RS08285	SM00014	Acid phosphatase homologues
BB788_RS08290	SM00833	Cobalamin synthesis protein cobW C-terminal domain
BB788_RS08305	SM00841	Elongation factor P, C-terminal
BB788_RS08305	SM01185	BB788_RS08305
BB788_RS08350	SM00518	AP endonuclease family 2
BB788_RS08400	SM00354	helix_turn _helix lactose operon repressor
BB788_RS08410	SM00382	ATPases associated with a variety of cellular activities
BB788_RS08455	SM01061	CAT RNA binding domain
BB788_RS08515	SM01217	BB788_RS08515
BB788_RS08530	SM00382	ATPases associated with a variety of cellular activities
BB788_RS08545	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BB788_RS08550	SM00448	cheY-homologous receiver domain
BB788_RS08550	SM00850	LytTr DNA-binding domain
BB788_RS08620	SM01133	BB788_RS08620
BB788_RS08640	SM00354	helix_turn _helix lactose operon repressor
BB788_RS08670	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
BB788_RS08690	SM00382	ATPases associated with a variety of cellular activities
BB788_RS08695	SM00382	ATPases associated with a variety of cellular activities
BB788_RS08700	SM00046	Diacylglycerol kinase catalytic domain (presumed)
BB788_RS08710	SM00448	cheY-homologous receiver domain
BB788_RS08710	SM00862	Transcriptional regulatory protein, C terminal
BB788_RS08715	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BB788_RS08715	SM00387	Histidine kinase-like ATPases
BB788_RS08715	SM00388	His Kinase A (phosphoacceptor) domain
BB788_RS08745	SM00421	helix_turn_helix, Lux Regulon
BB788_RS08755	SM00448	cheY-homologous receiver domain
BB788_RS08755	SM00862	Transcriptional regulatory protein, C terminal
BB788_RS08760	SM00387	Histidine kinase-like ATPases
BB788_RS08760	SM00388	His Kinase A (phosphoacceptor) domain
BB788_RS08770	SM00478	endonuclease III
BB788_RS08770	SM01009	AlkA N-terminal domain
BB788_RS08790	SM01091	Transporter associated domain
BB788_RS08805	SM00014	Acid phosphatase homologues
BB788_RS08835	SM00226	Low molecular weight phosphatase family
BB788_RS08885	SM01350	BB788_RS08885
BB788_RS08900	SM00984	UDP binding domain
BB788_RS08930	SM00382	ATPases associated with a variety of cellular activities
BB788_RS09030	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BB788_RS09035	SM00838	Elongation factor G C-terminus
BB788_RS09035	SM00889	Elongation factor G, domain IV
BB788_RS09040	SM00479	BB788_RS09040
BB788_RS09045	SM00936	Penicillin-binding protein 5, C-terminal domain 
BB788_RS09050	SM00871	Bacterial transcription activator, effector binding domain
BB788_RS09075	SM00996	S-adenosyl-L-homocysteine hydrolase
BB788_RS09075	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
BB788_RS09115	SM00052	Putative diguanylate phosphodiesterase
BB788_RS09115	SM00267	diguanylate cyclase
BB788_RS09150	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BB788_RS09150	SM00267	diguanylate cyclase
BB788_RS09200	SM00829	Enoylreductase
BB788_RS09445	SM00822	BB788_RS09445
BB788_RS09445	SM00823	Phosphopantetheine attachment site
BB788_RS09445	SM00824	Thioesterase
BB788_RS09445	SM00825	Beta-ketoacyl synthase
BB788_RS09445	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
BB788_RS09450	SM00823	Phosphopantetheine attachment site
BB788_RS09455	SM00342	helix_turn_helix, arabinose operon control protein
BB788_RS09460	SM00382	ATPases associated with a variety of cellular activities
BB788_RS09465	SM00382	ATPases associated with a variety of cellular activities
BB788_RS09540	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BB788_RS09565	SM00267	diguanylate cyclase
BB788_RS09580	SM00421	helix_turn_helix, Lux Regulon
BB788_RS09590	SM00642	Alpha-amylase domain
BB788_RS09595	SM00062	Bacterial periplasmic substrate-binding proteins
BB788_RS09595	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
BB788_RS09610	SM00382	ATPases associated with a variety of cellular activities
BB788_RS09615	SM00421	helix_turn_helix, Lux Regulon
BB788_RS09625	SM00421	helix_turn_helix, Lux Regulon
BB788_RS09625	SM00448	cheY-homologous receiver domain
BB788_RS09630	SM00278	Helix-hairpin-helix DNA-binding motif class 1
BB788_RS09630	SM00465	GIY-YIG type nucleases (URI domain)
BB788_RS09655	SM01130	BB788_RS09655
BB788_RS09725	SM00382	ATPases associated with a variety of cellular activities
BB788_RS09760	SM00836	DALR anticodon binding domain
BB788_RS09760	SM01016	Arginyl tRNA synthetase N terminal dom
BB788_RS09820	SM00278	Helix-hairpin-helix DNA-binding motif class 1
BB788_RS09825	SM00382	ATPases associated with a variety of cellular activities
BB788_RS09835	SM00382	ATPases associated with a variety of cellular activities
BB788_RS09845	SM00257	Lysin motif
BB788_RS09915	SM00479	BB788_RS09915
BB788_RS09990	SM00945	ProQ/FINO family
BB788_RS09995	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BB788_RS09995	SM00245	tail specific protease
BB788_RS10010	SM00346	helix_turn_helix isocitrate lyase regulation
BB788_RS10045	SM00357	Cold shock protein domain
BB788_RS10090	SM01091	Transporter associated domain
BB788_RS10095	SM00052	Putative diguanylate phosphodiesterase
BB788_RS10130	SM00487	DEAD-like helicases superfamily
BB788_RS10130	SM00491	BB788_RS10130
BB788_RS10150	SM00341	Helicase and RNase D C-terminal
BB788_RS10150	SM00474	3'-5' exonuclease
BB788_RS10205	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BB788_RS10225	SM01005	Alanine racemase, C-terminal domain
BB788_RS10230	SM01091	Transporter associated domain
BB788_RS10270	SM00460	Transglutaminase/protease-like homologues
BB788_RS10350	SM00382	ATPases associated with a variety of cellular activities
BB788_RS10355	SM00382	ATPases associated with a variety of cellular activities
BB788_RS10565	SM00422	helix_turn_helix, mercury resistance
BB788_RS10575	SM01400	BB788_RS10575
BB788_RS10600	SM00937	BB788_RS10600
BB788_RS10650	SM01012	BB788_RS10650
BB788_RS10670	SM00382	ATPases associated with a variety of cellular activities
BB788_RS10685	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
BB788_RS10695	SM00421	helix_turn_helix, Lux Regulon
BB788_RS10695	SM00448	cheY-homologous receiver domain
BB788_RS10700	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BB788_RS10700	SM00387	Histidine kinase-like ATPases
BB788_RS10715	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
BB788_RS10740	SM00344	helix_turn_helix ASNC type
BB788_RS10790	SM00448	cheY-homologous receiver domain
BB788_RS10800	SM00528	Domain in histone-like proteins of HNS family
BB788_RS10850	SM00382	ATPases associated with a variety of cellular activities
BB788_RS10855	SM00382	ATPases associated with a variety of cellular activities
BB788_RS10870	SM00155	Phospholipase D. Active site motifs.
BB788_RS10945	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
BB788_RS10975	SM00873	B3/4 domain
BB788_RS10975	SM00874	tRNA synthetase B5 domain
BB788_RS10975	SM00896	Ferredoxin-fold anticodon binding domain
BB788_RS10980	SM00411	bacterial (prokaryotic) histone like domain
BB788_RS11020	SM00382	ATPases associated with a variety of cellular activities
BB788_RS11115	SM00382	ATPases associated with a variety of cellular activities
BB788_RS11180	SM00382	ATPases associated with a variety of cellular activities
BB788_RS11255	SM00382	ATPases associated with a variety of cellular activities
BB788_RS11270	SM00346	helix_turn_helix isocitrate lyase regulation
BB788_RS11295	SM00859	Semialdehyde dehydrogenase, NAD binding domain
BB788_RS11315	SM00450	Rhodanese Homology Domain
BB788_RS11340	SM00062	Bacterial periplasmic substrate-binding proteins
BB788_RS11355	SM00382	ATPases associated with a variety of cellular activities
BB788_RS11365	SM00382	ATPases associated with a variety of cellular activities
BB788_RS11395	SM00062	Bacterial periplasmic substrate-binding proteins
BB788_RS11395	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
BB788_RS11405	SM00382	ATPases associated with a variety of cellular activities
BB788_RS11440	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
BB788_RS11465	SM00382	ATPases associated with a variety of cellular activities
BB788_RS11490	SM00382	ATPases associated with a variety of cellular activities
BB788_RS11575	SM00822	BB788_RS11575
BB788_RS11615	SM00882	Coenzyme A transferase
BB788_RS11620	SM00882	Coenzyme A transferase
BB788_RS11655	SM00382	ATPases associated with a variety of cellular activities
BB788_RS11720	SM00829	Enoylreductase
BB788_RS11750	SM00382	ATPases associated with a variety of cellular activities
BB788_RS11755	SM00382	ATPases associated with a variety of cellular activities
BB788_RS11775	SM01059	Chloramphenicol acetyltransferase
BB788_RS11785	SM00420	helix_turn_helix, Deoxyribose operon repressor
BB788_RS11785	SM01134	BB788_RS11785
BB788_RS11795	SM00947	Carbonic anhydrase
BB788_RS11825	SM00849	Metallo-beta-lactamase superfamily
BB788_RS11840	SM00342	helix_turn_helix, arabinose operon control protein
BB788_RS11915	SM00354	helix_turn _helix lactose operon repressor
BB788_RS11930	SM00342	helix_turn_helix, arabinose operon control protein
BB788_RS11945	SM00479	BB788_RS11945
BB788_RS11995	SM00347	helix_turn_helix multiple antibiotic resistance protein
BB788_RS12000	SM00267	diguanylate cyclase
BB788_RS12025	SM00363	S4 RNA-binding domain
BB788_RS12050	SM00478	endonuclease III
BB788_RS12050	SM00525	BB788_RS12050
BB788_RS12060	SM00900	BB788_RS12060
BB788_RS12145	SM00829	Enoylreductase
BB788_RS12150	SM00564	beta-propeller repeat
BB788_RS12170	SM01150	BB788_RS12170
BB788_RS12180	SM00829	Enoylreductase
BB788_RS12220	SM00342	helix_turn_helix, arabinose operon control protein
BB788_RS12230	SM00530	Helix-turn-helix XRE-family like proteins 
BB788_RS12270	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BB788_RS12280	SM00382	ATPases associated with a variety of cellular activities
BB788_RS12360	SM00530	Helix-turn-helix XRE-family like proteins 
BB788_RS12365	SM00829	Enoylreductase
BB788_RS12435	SM00062	Bacterial periplasmic substrate-binding proteins
BB788_RS12450	SM00382	ATPases associated with a variety of cellular activities
BB788_RS12455	SM00062	Bacterial periplasmic substrate-binding proteins
BB788_RS12465	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
BB788_RS12470	SM00354	helix_turn _helix lactose operon repressor
BB788_RS12485	SM00903	Flavin reductase like domain
BB788_RS12490	SM00382	ATPases associated with a variety of cellular activities
BB788_RS12525	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
BB788_RS12545	SM00346	helix_turn_helix isocitrate lyase regulation
BB788_RS12550	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
BB788_RS12580	SM00822	BB788_RS12580
BB788_RS12590	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
BB788_RS12645	SM00382	ATPases associated with a variety of cellular activities
BB788_RS12665	SM00829	Enoylreductase
BB788_RS12680	SM00347	helix_turn_helix multiple antibiotic resistance protein
BB788_RS12685	SM00382	ATPases associated with a variety of cellular activities
BB788_RS12695	SM00919	Malic enzyme, NAD binding domain
BB788_RS12695	SM01274	BB788_RS12695
BB788_RS12710	SM00849	Metallo-beta-lactamase superfamily
BB788_RS12760	SM00642	Alpha-amylase domain
BB788_RS12765	SM00822	BB788_RS12765
BB788_RS12800	SM00062	Bacterial periplasmic substrate-binding proteins
BB788_RS12895	SM00729	Elongator protein 3, MiaB family, Radical SAM
BB788_RS12930	SM00448	cheY-homologous receiver domain
BB788_RS12930	SM00862	Transcriptional regulatory protein, C terminal
BB788_RS12935	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BB788_RS12935	SM00387	Histidine kinase-like ATPases
BB788_RS12935	SM00388	His Kinase A (phosphoacceptor) domain
BB788_RS12980	SM00382	ATPases associated with a variety of cellular activities
BB788_RS13010	SM00354	helix_turn _helix lactose operon repressor
BB788_RS13015	SM00091	PAS domain
BB788_RS13015	SM00267	diguanylate cyclase
BB788_RS13030	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BB788_RS13030	SM00895	BB788_RS13030
BB788_RS13050	SM00342	helix_turn_helix, arabinose operon control protein
BB788_RS13065	SM00855	Phosphoglycerate mutase family
BB788_RS13090	SM00342	helix_turn_helix, arabinose operon control protein
BB788_RS13100	SM01022	BB788_RS13100
BB788_RS13115	SM00825	Beta-ketoacyl synthase
BB788_RS13140	SM00859	Semialdehyde dehydrogenase, NAD binding domain
BB788_RS13175	SM00062	Bacterial periplasmic substrate-binding proteins
BB788_RS13190	SM00382	ATPases associated with a variety of cellular activities
BB788_RS13240	SM01236	BB788_RS13240
BB788_RS13310	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
BB788_RS13315	SM00342	helix_turn_helix, arabinose operon control protein
BB788_RS13340	SM00342	helix_turn_helix, arabinose operon control protein
BB788_RS13345	SM00420	helix_turn_helix, Deoxyribose operon repressor
BB788_RS13345	SM01134	BB788_RS13345
BB788_RS13355	SM01133	BB788_RS13355
BB788_RS13360	SM00420	helix_turn_helix, Deoxyribose operon repressor
BB788_RS13360	SM01134	BB788_RS13360
BB788_RS13390	SM00882	Coenzyme A transferase
BB788_RS13395	SM00822	BB788_RS13395
BB788_RS13445	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BB788_RS13445	SM00866	BB788_RS13445
BB788_RS13495	SM00052	Putative diguanylate phosphodiesterase
BB788_RS13495	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
BB788_RS13495	SM00267	diguanylate cyclase
BB788_RS13555	SM00530	Helix-turn-helix XRE-family like proteins 
BB788_RS13600	SM00342	helix_turn_helix, arabinose operon control protein
BB788_RS13630	SM00382	ATPases associated with a variety of cellular activities
BB788_RS13730	SM00267	diguanylate cyclase
BB788_RS13765	SM00420	helix_turn_helix, Deoxyribose operon repressor
BB788_RS13765	SM01134	BB788_RS13765
BB788_RS13785	SM01130	BB788_RS13785
BB788_RS13805	SM00822	BB788_RS13805
BB788_RS13830	SM00347	helix_turn_helix multiple antibiotic resistance protein
BB788_RS13835	SM00342	helix_turn_helix, arabinose operon control protein
BB788_RS13855	SM00530	Helix-turn-helix XRE-family like proteins 
BB788_RS13860	SM00382	ATPases associated with a variety of cellular activities
BB788_RS13890	SM00450	Rhodanese Homology Domain
BB788_RS13895	SM00342	helix_turn_helix, arabinose operon control protein
BB788_RS13915	SM00354	helix_turn _helix lactose operon repressor
BB788_RS13925	SM01038	Beta galactosidase small chain
BB788_RS13950	SM00420	helix_turn_helix, Deoxyribose operon repressor
BB788_RS13950	SM01134	BB788_RS13950
BB788_RS13965	SM01007	Class II Aldolase and Adducin N-terminal domain
BB788_RS13980	SM00342	helix_turn_helix, arabinose operon control protein
BB788_RS13985	SM00421	helix_turn_helix, Lux Regulon
BB788_RS13995	SM00052	Putative diguanylate phosphodiesterase
BB788_RS13995	SM01034	Sensors of blue-light using FAD
BB788_RS14030	SM00421	helix_turn_helix, Lux Regulon
BB788_RS14050	SM00342	helix_turn_helix, arabinose operon control protein
BB788_RS14070	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BB788_RS14070	SM00895	BB788_RS14070
BB788_RS14115	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
BB788_RS14245	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
BB788_RS14270	SM00387	Histidine kinase-like ATPases
BB788_RS14275	SM00448	cheY-homologous receiver domain
BB788_RS14290	SM00900	BB788_RS14290
BB788_RS14345	SM00998	Adenylosuccinate lyase C-terminus
BB788_RS14355	SM00882	Coenzyme A transferase
BB788_RS14360	SM00882	Coenzyme A transferase
BB788_RS14370	SM00463	Small MutS-related domain
BB788_RS14405	SM00100	Cyclic nucleotide-monophosphate binding domain
BB788_RS14405	SM00419	helix_turn_helix, cAMP Regulatory protein
BB788_RS14425	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
BB788_RS14425	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
BB788_RS14470	SM00448	cheY-homologous receiver domain
BB788_RS14470	SM00862	Transcriptional regulatory protein, C terminal
BB788_RS14480	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BB788_RS14480	SM00387	Histidine kinase-like ATPases
BB788_RS14480	SM00388	His Kinase A (phosphoacceptor) domain
BB788_RS14520	SM00354	helix_turn _helix lactose operon repressor
BB788_RS14575	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
BB788_RS14635	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
BB788_RS14650	SM00347	helix_turn_helix multiple antibiotic resistance protein
BB788_RS14675	SM00382	ATPases associated with a variety of cellular activities
BB788_RS14675	SM00487	DEAD-like helicases superfamily
BB788_RS14675	SM00490	helicase superfamily c-terminal domain
BB788_RS14675	SM00847	Helicase associated domain (HA2)  Add an annotation
BB788_RS14770	SM00829	Enoylreductase
BB788_RS14785	SM00342	helix_turn_helix, arabinose operon control protein
BB788_RS14830	SM00890	Domain of unknown function
BB788_RS14855	SM00487	DEAD-like helicases superfamily
BB788_RS14855	SM00490	helicase superfamily c-terminal domain
BB788_RS14875	SM00420	helix_turn_helix, Deoxyribose operon repressor
BB788_RS14875	SM01134	BB788_RS14875
BB788_RS14900	SM00344	helix_turn_helix ASNC type
BB788_RS14920	SM00382	ATPases associated with a variety of cellular activities
BB788_RS14920	SM00930	BB788_RS14920
BB788_RS14935	SM00829	Enoylreductase
BB788_RS14950	SM00849	Metallo-beta-lactamase superfamily
BB788_RS14975	SM00342	helix_turn_helix, arabinose operon control protein
BB788_RS14980	SM00822	BB788_RS14980
BB788_RS14990	SM00822	BB788_RS14990
BB788_RS15100	SM00382	ATPases associated with a variety of cellular activities
BB788_RS15100	SM01086	C-terminal, D2-small domain, of ClpB protein
BB788_RS15220	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
BB788_RS15235	SM00091	PAS domain
BB788_RS15235	SM00382	ATPases associated with a variety of cellular activities
BB788_RS15280	SM00382	ATPases associated with a variety of cellular activities
BB788_RS15295	SM00342	helix_turn_helix, arabinose operon control protein
BB788_RS15300	SM00530	Helix-turn-helix XRE-family like proteins 
BB788_RS15350	SM00857	Resolvase, N terminal domain
BB788_RS15425	SM00635	Bacterial Ig-like domain 2
BB788_RS15620	SM00382	ATPases associated with a variety of cellular activities
BB788_RS15630	SM00994	ClpX C4-type zinc finger
BB788_RS15645	SM00530	Helix-turn-helix XRE-family like proteins 
BB788_RS15715	SM00382	ATPases associated with a variety of cellular activities
BB788_RS15720	SM00382	ATPases associated with a variety of cellular activities
BB788_RS15750	SM00357	Cold shock protein domain
BB788_RS15750	SM00955	BB788_RS15750
BB788_RS15760	SM00420	helix_turn_helix, Deoxyribose operon repressor
BB788_RS15760	SM01134	BB788_RS15760
BB788_RS15780	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
BB788_RS15785	SM00028	Tetratricopeptide repeats
BB788_RS15830	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
BB788_RS15830	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
BB788_RS15830	SM00493	BB788_RS15830
BB788_RS15855	SM00822	BB788_RS15855
BB788_RS15865	SM00363	S4 RNA-binding domain
BB788_RS15885	SM00481	DNA polymerase alpha chain like domain
BB788_RS15920	SM01329	BB788_RS15920
BB788_RS15935	SM00347	helix_turn_helix multiple antibiotic resistance protein
BB788_RS15940	SM00829	Enoylreductase
BB788_RS15960	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
BB788_RS16025	SM01060	BB788_RS16025
BB788_RS16040	SM00342	helix_turn_helix, arabinose operon control protein
BB788_RS16075	SM00465	GIY-YIG type nucleases (URI domain)
BB788_RS16145	SM00382	ATPases associated with a variety of cellular activities
BB788_RS16150	SM00450	Rhodanese Homology Domain
BB788_RS16170	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
BB788_RS16175	SM00829	Enoylreductase
BB788_RS16180	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
BB788_RS16185	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
BB788_RS16185	SM00493	BB788_RS16185
BB788_RS16195	SM00014	Acid phosphatase homologues
BB788_RS16210	SM00870	BB788_RS16210
BB788_RS16220	SM00636	BB788_RS16220
BB788_RS16225	SM00507	HNH nucleases
BB788_RS16240	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
BB788_RS16260	SM00763	PrkA AAA domain
BB788_RS16300	SM00822	BB788_RS16300
BB788_RS16350	SM00342	helix_turn_helix, arabinose operon control protein
BB788_RS16380	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BB788_RS16380	SM00267	diguanylate cyclase
BB788_RS16430	SM00870	BB788_RS16430
BB788_RS16435	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BB788_RS16440	SM00267	diguanylate cyclase
BB788_RS16440	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BB788_RS16460	SM00052	Putative diguanylate phosphodiesterase
BB788_RS16540	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BB788_RS16545	SM01329	BB788_RS16545
BB788_RS16580	SM00342	helix_turn_helix, arabinose operon control protein
BB788_RS16585	SM00448	cheY-homologous receiver domain
BB788_RS16585	SM00862	Transcriptional regulatory protein, C terminal
BB788_RS16590	SM00387	Histidine kinase-like ATPases
BB788_RS16595	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
BB788_RS16605	SM00382	ATPases associated with a variety of cellular activities
BB788_RS16635	SM00861	Transketolase, pyrimidine binding domain
BB788_RS16700	SM00382	ATPases associated with a variety of cellular activities
BB788_RS16715	SM00487	DEAD-like helicases superfamily
BB788_RS16715	SM00490	helicase superfamily c-terminal domain
BB788_RS16715	SM00982	BB788_RS16715
BB788_RS16715	SM01058	CarD-like/TRCF domain
BB788_RS16720	SM00257	Lysin motif
BB788_RS16825	SM00825	Beta-ketoacyl synthase
BB788_RS16835	SM00822	BB788_RS16835
BB788_RS16840	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
BB788_RS16870	SM00363	S4 RNA-binding domain
BB788_RS16875	SM00316	Ribosomal protein S1-like RNA-binding domain
BB788_RS16955	SM00450	Rhodanese Homology Domain
BB788_RS17015	SM00506	Appr-1"-p processing enzyme
BB788_RS17030	SM00481	DNA polymerase alpha chain like domain
BB788_RS17055	SM00255	Toll - interleukin 1 - resistance
BB788_RS17185	SM00903	Flavin reductase like domain
BB788_RS17260	SM01230	BB788_RS17260
BB788_RS17270	SM00530	Helix-turn-helix XRE-family like proteins 
BB788_RS17290	SM01329	BB788_RS17290
BB788_RS17350	SM00342	helix_turn_helix, arabinose operon control protein
BB788_RS17355	SM00267	diguanylate cyclase
BB788_RS17370	SM00052	Putative diguanylate phosphodiesterase
BB788_RS17400	SM00342	helix_turn_helix, arabinose operon control protein
BB788_RS17410	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
BB788_RS17415	SM00992	Hemimethylated DNA-binding protein YccV like
BB788_RS17435	SM00382	ATPases associated with a variety of cellular activities
BB788_RS17455	SM00881	CoA binding domain
BB788_RS17460	SM00851	MGS-like domain
BB788_RS17540	SM00382	ATPases associated with a variety of cellular activities
BB788_RS17545	SM00981	BB788_RS17545
BB788_RS17585	SM00382	ATPases associated with a variety of cellular activities
BB788_RS17625	SM00344	helix_turn_helix ASNC type
BB788_RS17625	SM00419	helix_turn_helix, cAMP Regulatory protein
BB788_RS17650	SM00849	Metallo-beta-lactamase superfamily
BB788_RS17720	SM00382	ATPases associated with a variety of cellular activities
BB788_RS17725	SM00849	Metallo-beta-lactamase superfamily
BB788_RS17730	SM00411	bacterial (prokaryotic) histone like domain
BB788_RS17735	SM00316	Ribosomal protein S1-like RNA-binding domain
BB788_RS17800	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
BB788_RS17810	SM00382	ATPases associated with a variety of cellular activities
BB788_RS17820	SM00843	BB788_RS17820
BB788_RS17825	SM00344	helix_turn_helix ASNC type
BB788_RS17845	SM00382	ATPases associated with a variety of cellular activities
BB788_RS17850	SM00382	ATPases associated with a variety of cellular activities
BB788_RS17860	SM00316	Ribosomal protein S1-like RNA-binding domain
BB788_RS17865	SM00382	ATPases associated with a variety of cellular activities
BB788_RS17865	SM01086	C-terminal, D2-small domain, of ClpB protein
BB788_RS17875	SM00357	Cold shock protein domain
BB788_RS17885	SM00382	ATPases associated with a variety of cellular activities
BB788_RS17945	SM00644	BB788_RS17945
BB788_RS17950	SM00267	diguanylate cyclase
BB788_RS17970	SM00382	ATPases associated with a variety of cellular activities
BB788_RS17975	SM00062	Bacterial periplasmic substrate-binding proteins
BB788_RS17975	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
BB788_RS17990	SM00062	Bacterial periplasmic substrate-binding proteins
BB788_RS17990	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
BB788_RS17995	SM00387	Histidine kinase-like ATPases
BB788_RS17995	SM00388	His Kinase A (phosphoacceptor) domain
BB788_RS18000	SM00448	cheY-homologous receiver domain
BB788_RS18000	SM00862	Transcriptional regulatory protein, C terminal
BB788_RS18025	SM00382	ATPases associated with a variety of cellular activities
BB788_RS18100	SM00014	Acid phosphatase homologues
BB788_RS18105	SM00420	helix_turn_helix, Deoxyribose operon repressor
BB788_RS18105	SM01134	BB788_RS18105
BB788_RS18110	SM00936	Penicillin-binding protein 5, C-terminal domain 
BB788_RS18140	SM00729	Elongator protein 3, MiaB family, Radical SAM
BB788_RS18160	SM00382	ATPases associated with a variety of cellular activities
BB788_RS18170	SM00852	Probable molybdopterin binding domain
BB788_RS18200	SM00354	helix_turn _helix lactose operon repressor
BB788_RS18215	SM00382	ATPases associated with a variety of cellular activities
BB788_RS18230	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BB788_RS18230	SM00866	BB788_RS18230
BB788_RS18245	SM00529	Helix-turn-helix diphteria tox regulatory element
BB788_RS18280	SM00062	Bacterial periplasmic substrate-binding proteins
BB788_RS18280	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
BB788_RS18290	SM00382	ATPases associated with a variety of cellular activities
BB788_RS18305	SM00903	Flavin reductase like domain
BB788_RS18330	SM00487	DEAD-like helicases superfamily
BB788_RS18330	SM00488	BB788_RS18330
BB788_RS18330	SM00491	BB788_RS18330
BB788_RS18335	SM00487	DEAD-like helicases superfamily
BB788_RS18335	SM00490	helicase superfamily c-terminal domain
BB788_RS18340	SM00861	Transketolase, pyrimidine binding domain
BB788_RS18350	SM00822	BB788_RS18350
BB788_RS18380	SM00382	ATPases associated with a variety of cellular activities
BB788_RS18405	SM00155	Phospholipase D. Active site motifs.
BB788_RS18435	SM00852	Probable molybdopterin binding domain
BB788_RS18440	SM00729	Elongator protein 3, MiaB family, Radical SAM
BB788_RS18460	SM00448	cheY-homologous receiver domain
BB788_RS18460	SM00862	Transcriptional regulatory protein, C terminal
BB788_RS18465	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BB788_RS18465	SM00387	Histidine kinase-like ATPases
BB788_RS18465	SM00388	His Kinase A (phosphoacceptor) domain
BB788_RS18470	SM00487	DEAD-like helicases superfamily
BB788_RS18470	SM00490	helicase superfamily c-terminal domain
BB788_RS18485	SM00382	ATPases associated with a variety of cellular activities
BB788_RS18505	SM00729	Elongator protein 3, MiaB family, Radical SAM
BB788_RS18505	SM00876	Biotin and Thiamin Synthesis associated domain
BB788_RS18540	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BB788_RS18540	SM00866	BB788_RS18540
BB788_RS18560	SM00831	Cation transporter/ATPase, N-terminus
BB788_RS18600	SM00421	helix_turn_helix, Lux Regulon
BB788_RS18605	SM00422	helix_turn_helix, mercury resistance
BB788_RS18610	SM00052	Putative diguanylate phosphodiesterase
BB788_RS18610	SM01034	Sensors of blue-light using FAD
BB788_RS18640	SM00382	ATPases associated with a variety of cellular activities
BB788_RS18665	SM00382	ATPases associated with a variety of cellular activities
BB788_RS18670	SM00382	ATPases associated with a variety of cellular activities
BB788_RS18700	SM00855	Phosphoglycerate mutase family
BB788_RS18835	SM00881	CoA binding domain
BB788_RS18850	SM00861	Transketolase, pyrimidine binding domain
BB788_RS18895	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
BB788_RS18895	SM01232	BB788_RS18895
BB788_RS18920	SM00797	Allophanate hydrolase subunit 2
BB788_RS18925	SM00796	Allophanate hydrolase subunit 1
BB788_RS18970	SM00387	Histidine kinase-like ATPases
BB788_RS18970	SM00388	His Kinase A (phosphoacceptor) domain
BB788_RS18975	SM00448	cheY-homologous receiver domain
BB788_RS18975	SM00862	Transcriptional regulatory protein, C terminal
BB788_RS19120	SM00729	Elongator protein 3, MiaB family, Radical SAM
BB788_RS19135	SM00116	Domain in cystathionine beta-synthase and other proteins.
BB788_RS19135	SM01091	Transporter associated domain
BB788_RS19145	SM00062	Bacterial periplasmic substrate-binding proteins
BB788_RS19160	SM00382	ATPases associated with a variety of cellular activities
BB788_RS19175	SM00912	haemagglutination activity domain
BB788_RS19205	SM00855	Phosphoglycerate mutase family
BB788_RS19240	SM00936	Penicillin-binding protein 5, C-terminal domain 
BB788_RS19260	SM00729	Elongator protein 3, MiaB family, Radical SAM
BB788_RS19280	SM00357	Cold shock protein domain
BB788_RS19335	SM00470	ParB-like nuclease domain
BB788_RS19365	SM00382	ATPases associated with a variety of cellular activities
BB788_RS19395	SM01007	Class II Aldolase and Adducin N-terminal domain
BB788_RS19415	SM00354	helix_turn _helix lactose operon repressor
BB788_RS19460	SM00382	ATPases associated with a variety of cellular activities
BB788_RS19470	SM00822	BB788_RS19470
BB788_RS19480	SM00530	Helix-turn-helix XRE-family like proteins 
BB788_RS19500	SM00822	BB788_RS19500
BB788_RS19540	SM00382	ATPases associated with a variety of cellular activities
BB788_RS19545	SM00823	Phosphopantetheine attachment site
BB788_RS19545	SM00824	Thioesterase
BB788_RS19550	SM00923	MbtH-like protein
BB788_RS19575	SM00861	Transketolase, pyrimidine binding domain
BB788_RS19610	SM00382	ATPases associated with a variety of cellular activities
BB788_RS19695	SM00382	ATPases associated with a variety of cellular activities
BB788_RS19700	SM00382	ATPases associated with a variety of cellular activities
BB788_RS19730	SM00062	Bacterial periplasmic substrate-binding proteins
BB788_RS19775	SM00382	ATPases associated with a variety of cellular activities
BB788_RS19815	SM00640	Glycosyl hydrolases family 32
BB788_RS19820	SM00354	helix_turn _helix lactose operon repressor
BB788_RS19840	SM00382	ATPases associated with a variety of cellular activities
BB788_RS19850	SM00354	helix_turn _helix lactose operon repressor
BB788_RS19905	SM00862	Transcriptional regulatory protein, C terminal
BB788_RS19940	SM00095	Transthyretin
BB788_RS19970	SM00840	BB788_RS19970
BB788_RS19995	SM01001	AIR carboxylase
BB788_RS20005	SM00450	Rhodanese Homology Domain
BB788_RS20025	SM00382	ATPases associated with a variety of cellular activities
BB788_RS20035	SM00822	BB788_RS20035
BB788_RS20050	SM00382	ATPases associated with a variety of cellular activities
BB788_RS20055	SM00244	prohibitin homologues
BB788_RS20065	SM00422	helix_turn_helix, mercury resistance
BB788_RS20125	SM00387	Histidine kinase-like ATPases
BB788_RS20130	SM00493	BB788_RS20130
BB788_RS20140	SM00382	ATPases associated with a variety of cellular activities
BB788_RS20200	SM01266	BB788_RS20200
BB788_RS20215	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BB788_RS20235	SM00354	helix_turn _helix lactose operon repressor
BB788_RS20280	SM00382	ATPases associated with a variety of cellular activities
BB788_RS20285	SM00052	Putative diguanylate phosphodiesterase
BB788_RS20305	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BB788_RS20350	SM00938	Nitrogen regulatory protein P-II
BB788_RS20355	SM00382	ATPases associated with a variety of cellular activities
BB788_RS20360	SM00382	ATPases associated with a variety of cellular activities
BB788_RS20365	SM00344	helix_turn_helix ASNC type
BB788_RS20395	SM00278	Helix-hairpin-helix DNA-binding motif class 1
BB788_RS20405	SM00411	bacterial (prokaryotic) histone like domain
BB788_RS20410	SM00382	ATPases associated with a variety of cellular activities
BB788_RS20410	SM00464	Found in ATP-dependent protease La (LON)
BB788_RS20415	SM00382	ATPases associated with a variety of cellular activities
BB788_RS20415	SM00994	ClpX C4-type zinc finger
BB788_RS20415	SM01086	C-terminal, D2-small domain, of ClpB protein
BB788_RS20480	SM00346	helix_turn_helix isocitrate lyase regulation
BB788_RS20550	SM00981	BB788_RS20550
BB788_RS20565	SM00861	Transketolase, pyrimidine binding domain
BB788_RS20635	SM01323	BB788_RS20635
BB788_RS20715	SM00642	Alpha-amylase domain
BB788_RS20730	SM00091	PAS domain
BB788_RS20730	SM00387	Histidine kinase-like ATPases
BB788_RS20730	SM00388	His Kinase A (phosphoacceptor) domain
BB788_RS20735	SM00448	cheY-homologous receiver domain
BB788_RS20735	SM00862	Transcriptional regulatory protein, C terminal
BB788_RS20800	SM00098	Alkaline phosphatase homologues
BB788_RS20855	SM01004	Delta-aminolevulinic acid dehydratase
BB788_RS20860	SM00563	Phosphate acyltransferases
BB788_RS20875	SM00382	ATPases associated with a variety of cellular activities
BB788_RS20880	SM00062	Bacterial periplasmic substrate-binding proteins
BB788_RS20935	SM00382	ATPases associated with a variety of cellular activities
BB788_RS20940	SM00382	ATPases associated with a variety of cellular activities
BB788_RS20950	SM00062	Bacterial periplasmic substrate-binding proteins
BB788_RS20950	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
BB788_RS20955	SM00382	ATPases associated with a variety of cellular activities
BB788_RS20995	SM00421	helix_turn_helix, Lux Regulon
BB788_RS21000	SM00382	ATPases associated with a variety of cellular activities
BB788_RS21060	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
BB788_RS21115	SM00862	Transcriptional regulatory protein, C terminal
BB788_RS21145	SM00052	Putative diguanylate phosphodiesterase
BB788_RS21185	SM00507	HNH nucleases
BB788_RS21230	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BB788_RS21230	SM00895	BB788_RS21230
BB788_RS21290	SM00900	BB788_RS21290
BB788_RS21350	SM00479	BB788_RS21350
BB788_RS21365	SM00849	Metallo-beta-lactamase superfamily
BB788_RS21370	SM00257	Lysin motif
BB788_RS21435	SM00382	ATPases associated with a variety of cellular activities
BB788_RS21435	SM00930	BB788_RS21435
BB788_RS21480	SM01322	BB788_RS21480
BB788_RS21495	SM00977	TilS substrate C-terminal domain
BB788_RS21515	SM00481	DNA polymerase alpha chain like domain
BB788_RS21545	SM00935	Outer membrane protein (OmpH-like)
BB788_RS21555	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BB788_RS21605	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BB788_RS21625	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BB788_RS21630	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BB788_RS21675	SM00382	ATPases associated with a variety of cellular activities
BB788_RS21705	SM00642	Alpha-amylase domain
BB788_RS21725	SM00382	ATPases associated with a variety of cellular activities
BB788_RS21780	SM00487	DEAD-like helicases superfamily
BB788_RS21780	SM00490	helicase superfamily c-terminal domain
BB788_RS21780	SM00847	Helicase associated domain (HA2)  Add an annotation
BB788_RS21845	SM00382	ATPases associated with a variety of cellular activities
BB788_RS21850	SM00947	Carbonic anhydrase
BB788_RS21865	SM00564	beta-propeller repeat
BB788_RS21945	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BB788_RS21945	SM00895	BB788_RS21945
BB788_RS21975	SM00644	BB788_RS21975
BB788_RS22000	SM01240	BB788_RS22000
BB788_RS22030	SM00957	SecA DEAD-like domain
BB788_RS22030	SM00958	SecA preprotein cross-linking domain
BB788_RS22045	SM00864	Tubulin/FtsZ family, GTPase domain
BB788_RS22045	SM00865	Tubulin/FtsZ family, C-terminal domain
BB788_RS22050	SM00842	Cell division protein FtsA
BB788_RS22125	SM00354	helix_turn _helix lactose operon repressor
BB788_RS22160	SM00917	LeuA allosteric (dimerisation) domain
BB788_RS22165	SM01329	BB788_RS22165
BB788_RS22240	SM00382	ATPases associated with a variety of cellular activities
BB788_RS22250	SM00342	helix_turn_helix, arabinose operon control protein
BB788_RS22270	SM01007	Class II Aldolase and Adducin N-terminal domain
BB788_RS22275	SM00486	DNA polymerase type-B family
BB788_RS22280	SM00487	DEAD-like helicases superfamily
BB788_RS22280	SM00490	helicase superfamily c-terminal domain
BB788_RS22305	SM00091	PAS domain
BB788_RS22305	SM00387	Histidine kinase-like ATPases
BB788_RS22310	SM00448	cheY-homologous receiver domain
BB788_RS22315	SM00271	DnaJ molecular chaperone homology domain
BB788_RS22335	SM00650	Ribosomal RNA adenine dimethylases
BB788_RS22380	SM00851	MGS-like domain
BB788_RS22380	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
BB788_RS22385	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
BB788_RS22445	SM00904	Riboflavin kinase
BB788_RS22475	SM00271	DnaJ molecular chaperone homology domain
BB788_RS22505	SM00852	Probable molybdopterin binding domain
BB788_RS22565	SM00448	cheY-homologous receiver domain
BB788_RS22565	SM00862	Transcriptional regulatory protein, C terminal
BB788_RS22575	SM00387	Histidine kinase-like ATPases
BB788_RS22575	SM00388	His Kinase A (phosphoacceptor) domain
BB788_RS22580	SM00448	cheY-homologous receiver domain
BB788_RS22580	SM00862	Transcriptional regulatory protein, C terminal
BB788_RS22590	SM00342	helix_turn_helix, arabinose operon control protein
BB788_RS22590	SM00871	Bacterial transcription activator, effector binding domain
BB788_RS22595	SM00855	Phosphoglycerate mutase family
BB788_RS22620	SM00382	ATPases associated with a variety of cellular activities
BB788_RS22625	SM00530	Helix-turn-helix XRE-family like proteins 
BB788_RS22630	SM00382	ATPases associated with a variety of cellular activities
BB788_RS22665	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
BB788_RS22670	SM01133	BB788_RS22670
BB788_RS22695	SM00749	bacterial OsmY and nodulation domain
BB788_RS22750	SM00267	diguanylate cyclase
BB788_RS22770	SM00421	helix_turn_helix, Lux Regulon
BB788_RS22775	SM00421	helix_turn_helix, Lux Regulon
BB788_RS22780	SM00342	helix_turn_helix, arabinose operon control protein
BB788_RS22810	SM00382	ATPases associated with a variety of cellular activities
BB788_RS22860	SM00382	ATPases associated with a variety of cellular activities
BB788_RS22910	SM01119	BB788_RS22910
BB788_RS22930	SM00347	helix_turn_helix multiple antibiotic resistance protein
BB788_RS22980	SM00342	helix_turn_helix, arabinose operon control protein
BB788_RS22990	SM00903	Flavin reductase like domain
BB788_RS23005	SM00833	Cobalamin synthesis protein cobW C-terminal domain
BB788_RS23025	SM00342	helix_turn_helix, arabinose operon control protein
BB788_RS23075	SM00347	helix_turn_helix multiple antibiotic resistance protein
BB788_RS23085	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BB788_RS23095	SM00487	DEAD-like helicases superfamily
BB788_RS23135	SM00862	Transcriptional regulatory protein, C terminal
BB788_RS23145	SM00877	BB788_RS23145
BB788_RS23150	SM00877	BB788_RS23150
BB788_RS23155	SM00877	BB788_RS23155
BB788_RS23185	SM00877	BB788_RS23185
BB788_RS23220	SM00382	ATPases associated with a variety of cellular activities
BB788_RS23260	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
BB788_RS23275	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BB788_RS23275	SM00387	Histidine kinase-like ATPases
BB788_RS23275	SM00388	His Kinase A (phosphoacceptor) domain
BB788_RS23280	SM00448	cheY-homologous receiver domain
BB788_RS23280	SM00862	Transcriptional regulatory protein, C terminal
BB788_RS23320	SM00422	helix_turn_helix, mercury resistance
BB788_RS23525	SM00947	Carbonic anhydrase
BB788_RS23535	SM00829	Enoylreductase
BB788_RS23555	SM00382	ATPases associated with a variety of cellular activities
BB788_RS23710	SM00831	Cation transporter/ATPase, N-terminus
BB788_RS23720	SM00354	helix_turn _helix lactose operon repressor
BB788_RS23730	SM00642	Alpha-amylase domain
BB788_RS23890	SM00382	ATPases associated with a variety of cellular activities
BB788_RS23965	SM01130	BB788_RS23965
BB788_RS23990	SM00271	DnaJ molecular chaperone homology domain
BB788_RS24035	SM00421	helix_turn_helix, Lux Regulon
BB788_RS24110	SM00883	Chaperonin 10 Kd subunit
BB788_RS24130	SM00382	ATPases associated with a variety of cellular activities
BB788_RS24165	SM00862	Transcriptional regulatory protein, C terminal
BB788_RS24175	SM00841	Elongation factor P, C-terminal
BB788_RS24175	SM01185	BB788_RS24175
BB788_RS24245	SM00479	BB788_RS24245
BB788_RS24250	SM00062	Bacterial periplasmic substrate-binding proteins
BB788_RS24250	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
BB788_RS24285	SM00646	BB788_RS24285
BB788_RS24290	SM00853	MutL C terminal dimerisation domain
BB788_RS24290	SM01340	BB788_RS24290
BB788_RS24310	SM00244	prohibitin homologues
BB788_RS24315	SM00244	prohibitin homologues
BB788_RS24335	SM00788	Adenylosuccinate synthetase
BB788_RS24345	SM00316	Ribosomal protein S1-like RNA-binding domain
BB788_RS24345	SM00357	Cold shock protein domain
BB788_RS24345	SM00955	BB788_RS24345
BB788_RS24350	SM00967	RNA 2'-O ribose methyltransferase substrate binding
BB788_RS24375	SM00420	helix_turn_helix, Deoxyribose operon repressor
BB788_RS24375	SM01134	BB788_RS24375
BB788_RS24400	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
BB788_RS24410	SM01007	Class II Aldolase and Adducin N-terminal domain
BB788_RS24470	SM00342	helix_turn_helix, arabinose operon control protein
BB788_RS24505	SM00342	helix_turn_helix, arabinose operon control protein
BB788_RS24520	SM01091	Transporter associated domain
BB788_RS24530	SM00354	helix_turn _helix lactose operon repressor
BB788_RS24580	SM00342	helix_turn_helix, arabinose operon control protein
BB788_RS24605	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BB788_RS24605	SM00866	BB788_RS24605
BB788_RS24630	SM00382	ATPases associated with a variety of cellular activities
BB788_RS24635	SM00382	ATPases associated with a variety of cellular activities
BB788_RS24645	SM00072	Guanylate kinase homologues.
BB788_RS24660	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BB788_RS24660	SM00387	Histidine kinase-like ATPases
BB788_RS24660	SM00388	His Kinase A (phosphoacceptor) domain
BB788_RS24660	SM00448	cheY-homologous receiver domain
BB788_RS24665	SM00382	ATPases associated with a variety of cellular activities
BB788_RS24695	SM00448	cheY-homologous receiver domain
BB788_RS24695	SM00862	Transcriptional regulatory protein, C terminal
BB788_RS24705	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
BB788_RS24715	SM00671	Sel1-like repeats.
BB788_RS24810	SM00422	helix_turn_helix, mercury resistance
BB788_RS24815	SM00342	helix_turn_helix, arabinose operon control protein
BB788_RS24820	SM00052	Putative diguanylate phosphodiesterase
BB788_RS24850	SM00382	ATPases associated with a variety of cellular activities
BB788_RS24860	SM00354	helix_turn _helix lactose operon repressor
BB788_RS24900	SM00342	helix_turn_helix, arabinose operon control protein
BB788_RS24915	SM00062	Bacterial periplasmic substrate-binding proteins
BB788_RS24950	SM01005	Alanine racemase, C-terminal domain
BB788_RS24955	SM00382	ATPases associated with a variety of cellular activities
BB788_RS24960	SM00829	Enoylreductase
BB788_RS25015	SM00563	Phosphate acyltransferases
BB788_RS25040	SM00382	ATPases associated with a variety of cellular activities
BB788_RS25125	SM00363	S4 RNA-binding domain
BB788_RS25140	SM01018	B12 binding domain
BB788_RS25145	SM00346	helix_turn_helix isocitrate lyase regulation
BB788_RS25205	SM00798	AICARFT/IMPCHase bienzyme
BB788_RS25205	SM00851	MGS-like domain
BB788_RS25210	SM01209	BB788_RS25210
BB788_RS25210	SM01210	BB788_RS25210
BB788_RS25215	SM00382	ATPases associated with a variety of cellular activities
BB788_RS25215	SM00448	cheY-homologous receiver domain
BB788_RS25220	SM00387	Histidine kinase-like ATPases
BB788_RS25220	SM00388	His Kinase A (phosphoacceptor) domain
BB788_RS25240	SM00411	bacterial (prokaryotic) histone like domain
BB788_RS25295	SM00876	Biotin and Thiamin Synthesis associated domain
BB788_RS25305	SM00267	diguanylate cyclase
BB788_RS25325	SM00663	RNA polymerase I subunit A N-terminus
BB788_RS25355	SM00649	Ribosomal protein L11/L12
BB788_RS25360	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
BB788_RS25360	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
BB788_RS25490	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
BB788_RS25585	SM00341	Helicase and RNase D C-terminal
BB788_RS25585	SM00487	DEAD-like helicases superfamily
BB788_RS25585	SM00490	helicase superfamily c-terminal domain
BB788_RS25585	SM00956	BB788_RS25585
BB788_RS25645	SM01219	BB788_RS25645
BB788_RS25750	SM00984	UDP binding domain
BB788_RS25770	SM00357	Cold shock protein domain
BB788_RS25770	SM00382	ATPases associated with a variety of cellular activities
BB788_RS25770	SM00959	Rho termination factor, N-terminal domain
BB788_RS25785	SM00487	DEAD-like helicases superfamily
BB788_RS25785	SM00490	helicase superfamily c-terminal domain
BB788_RS25875	SM00382	ATPases associated with a variety of cellular activities
BB788_RS25980	SM00859	Semialdehyde dehydrogenase, NAD binding domain
BB788_RS26000	SM00342	helix_turn_helix, arabinose operon control protein
BB788_RS26065	SM00487	DEAD-like helicases superfamily
BB788_RS26065	SM00490	helicase superfamily c-terminal domain
BB788_RS26075	SM00354	helix_turn _helix lactose operon repressor
BB788_RS26090	SM00382	ATPases associated with a variety of cellular activities
BB788_RS26090	SM01086	C-terminal, D2-small domain, of ClpB protein
BB788_RS26120	SM00448	cheY-homologous receiver domain
BB788_RS26120	SM00862	Transcriptional regulatory protein, C terminal
BB788_RS26125	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BB788_RS26125	SM00387	Histidine kinase-like ATPases
BB788_RS26125	SM00388	His Kinase A (phosphoacceptor) domain
BB788_RS26145	SM00342	helix_turn_helix, arabinose operon control protein
BB788_RS26150	SM00342	helix_turn_helix, arabinose operon control protein
BB788_RS26170	SM01007	Class II Aldolase and Adducin N-terminal domain
BB788_RS26180	SM00382	ATPases associated with a variety of cellular activities
BB788_RS26215	SM00354	helix_turn _helix lactose operon repressor
BB788_RS26220	SM00530	Helix-turn-helix XRE-family like proteins 
BB788_RS26285	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
BB788_RS26360	SM01230	BB788_RS26360
BB788_RS26365	SM00091	PAS domain
BB788_RS26365	SM00387	Histidine kinase-like ATPases
BB788_RS26365	SM00388	His Kinase A (phosphoacceptor) domain
BB788_RS26370	SM00382	ATPases associated with a variety of cellular activities
BB788_RS26370	SM00448	cheY-homologous receiver domain
BB788_RS26375	SM00729	Elongator protein 3, MiaB family, Radical SAM
BB788_RS26395	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
BB788_RS26395	SM00474	3'-5' exonuclease
BB788_RS26395	SM00475	5'-3' exonuclease
BB788_RS26395	SM00482	DNA polymerase A domain
BB788_RS26400	SM00563	Phosphate acyltransferases
BB788_RS26455	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BB788_RS26455	SM00895	BB788_RS26455
BB788_RS26465	SM00354	helix_turn _helix lactose operon repressor
BB788_RS26485	SM00382	ATPases associated with a variety of cellular activities
BB788_RS26500	SM00382	ATPases associated with a variety of cellular activities
BB788_RS26505	SM00327	von Willebrand factor (vWF) type A domain
BB788_RS26515	SM00344	helix_turn_helix ASNC type
BB788_RS26530	SM01228	BB788_RS26530
BB788_RS26575	SM00382	ATPases associated with a variety of cellular activities
BB788_RS26625	SM00382	ATPases associated with a variety of cellular activities
BB788_RS26705	SM01234	BB788_RS26705
BB788_RS28620	SM00532	Ligase N family
BB788_RS28720	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
BB788_RS30730	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BB788_RS30730	SM00895	BB788_RS30730
