locus-tag class description D0887_RS00005 PF00308 Bacterial dnaA protein D0887_RS00010 PF04754 Putative transposase, YhgA-like D0887_RS00015 PF03960 ArsC family D0887_RS00020 PF01435 Peptidase family M48 D0887_RS00025 PF01594 AI-2E family transporter D0887_RS00030 PF00578 AhpC/TSA family D0887_RS00035 PF01842 ACT domain D0887_RS00040 PF00701 Dihydrodipicolinate synthetase family D0887_RS00045 PF06804 NlpB/DapX lipoprotein D0887_RS00050 PF01259 SAICAR synthetase D0887_RS00055 PF04228 Putative neutral zinc metallopeptidase D0887_RS00060 PF17176 tRNA-binding domain D0887_RS00060 PF05127 Helicase D0887_RS00060 PF13718 GNAT acetyltransferase 2 D0887_RS00060 PF08351 Domain of unknown function (DUF1726) D0887_RS00065 PF02230 Phospholipase/Carboxylesterase D0887_RS00070 PF13980 Uncharacterised protein family (UPF0370) D0887_RS00075 PF01546 Peptidase family M20/M25/M40 D0887_RS00075 PF07687 Peptidase dimerisation domain D0887_RS00080 PF03960 ArsC family D0887_RS00090 PF00873 AcrB/AcrD/AcrF family D0887_RS00100 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster D0887_RS00100 PF07992 Pyridine nucleotide-disulphide oxidoreductase D0887_RS00100 PF13247 4Fe-4S dicluster domain D0887_RS00105 PF00293 NUDIX domain D0887_RS00110 PF06674 Protein of unknown function (DUF1176) D0887_RS00115 PF02780 Transketolase, C-terminal domain D0887_RS00115 PF00456 Transketolase, thiamine diphosphate binding domain D0887_RS00115 PF02779 Transketolase, pyrimidine binding domain D0887_RS00120 PF00923 Transaldolase/Fructose-6-phosphate aldolase D0887_RS00125 PF00390 Malic enzyme, N-terminal domain D0887_RS00125 PF03949 Malic enzyme, NAD binding domain D0887_RS00125 PF01515 Phosphate acetyl/butaryl transferase D0887_RS00130 PF00936 BMC domain D0887_RS00135 PF10662 Ethanolamine utilisation - propanediol utilisation D0887_RS00140 PF06249 Ethanolamine utilisation protein EutQ D0887_RS00145 PF01923 Cobalamin adenosyltransferase D0887_RS00150 PF01515 Phosphate acetyl/butaryl transferase D0887_RS00155 PF00936 BMC domain D0887_RS00160 PF03319 Ethanolamine utilisation protein EutN/carboxysome D0887_RS00165 PF00171 Aldehyde dehydrogenase family D0887_RS00175 PF00465 Iron-containing alcohol dehydrogenase D0887_RS00180 PF04346 Ethanolamine utilisation protein, EutH D0887_RS00185 PF06277 Ethanolamine utilisation protein EutA D0887_RS00190 PF06751 Ethanolamine ammonia lyase large subunit (EutB) D0887_RS00195 PF05985 Ethanolamine ammonia-lyase light chain (EutC) D0887_RS00200 PF00936 BMC domain D0887_RS00205 PF16365 Ethanolamine utilization protein EutK C-terminus D0887_RS00205 PF00936 BMC domain D0887_RS00210 PF12833 Helix-turn-helix domain D0887_RS00215 PF01218 Coproporphyrinogen III oxidase D0887_RS00220 PF01520 N-acetylmuramoyl-L-alanine amidase D0887_RS00225 PF00583 Acetyltransferase (GNAT) family D0887_RS00230 PF11143 Protein of unknown function (DUF2919) D0887_RS00235 PF06572 Protein of unknown function (DUF1131) D0887_RS00240 PF04261 Dyp-type peroxidase family D0887_RS00255 PF00528 Binding-protein-dependent transport system inner membrane component D0887_RS00260 PF00528 Binding-protein-dependent transport system inner membrane component D0887_RS00265 PF00005 ABC transporter D0887_RS00270 PF00291 Pyridoxal-phosphate dependent enzyme D0887_RS00275 PF13474 SnoaL-like domain D0887_RS00280 PF00155 Aminotransferase class I and II D0887_RS00280 PF00392 Bacterial regulatory proteins, gntR family D0887_RS00285 PF08543 Phosphomethylpyrimidine kinase D0887_RS00295 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 D0887_RS00300 PF05524 PEP-utilising enzyme, N-terminal D0887_RS00300 PF00391 PEP-utilising enzyme, mobile domain D0887_RS00300 PF02896 PEP-utilising enzyme, TIM barrel domain D0887_RS00305 PF00381 PTS HPr component phosphorylation site D0887_RS00310 PF00291 Pyridoxal-phosphate dependent enzyme D0887_RS00320 PF04354 ZipA, C-terminal FtsZ-binding domain D0887_RS00325 PF12826 Helix-hairpin-helix motif D0887_RS00325 PF03120 NAD-dependent DNA ligase OB-fold domain D0887_RS00325 PF01653 NAD-dependent DNA ligase adenylation domain D0887_RS00325 PF03119 NAD-dependent DNA ligase C4 zinc finger domain D0887_RS00325 PF00533 BRCA1 C Terminus (BRCT) domain D0887_RS00330 PF12843 Putative quorum-sensing-regulated virulence factor D0887_RS00335 PF13593 SBF-like CPA transporter family (DUF4137) D0887_RS00340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0887_RS00340 PF03466 LysR substrate binding domain D0887_RS00380 PF00749 tRNA synthetases class I (E and Q), catalytic domain D0887_RS00385 PF07037 Putative transcription regulator (DUF1323) D0887_RS00390 PF07037 Putative transcription regulator (DUF1323) D0887_RS00405 PF00563 EAL domain D0887_RS00405 PF05231 MASE1 D0887_RS00410 PF07670 Nucleoside recognition D0887_RS00410 PF01773 Na+ dependent nucleoside transporter N-terminus D0887_RS00410 PF07662 Na+ dependent nucleoside transporter C-terminus D0887_RS00415 PF01566 Natural resistance-associated macrophage protein D0887_RS00420 PF10697 Protein of unknown function (DUF2502) D0887_RS00425 PF00248 Aldo/keto reductase family D0887_RS00430 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D0887_RS00430 PF00205 Thiamine pyrophosphate enzyme, central domain D0887_RS00430 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D0887_RS00435 PF00654 Voltage gated chloride channel D0887_RS00440 PF02685 Glucokinase D0887_RS00445 PF04397 LytTr DNA-binding domain D0887_RS00445 PF00072 Response regulator receiver domain D0887_RS00450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0887_RS00450 PF06580 Histidine kinase D0887_RS00450 PF07694 5TMR of 5TMR-LYT D0887_RS00460 PF00155 Aminotransferase class I and II D0887_RS00470 PF07690 Major Facilitator Superfamily D0887_RS00475 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region D0887_RS00480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0887_RS00480 PF03466 LysR substrate binding domain D0887_RS00500 PF00589 Phage integrase family D0887_RS00500 PF13356 Arm DNA-binding domain D0887_RS00500 PF14659 Phage integrase, N-terminal SAM-like domain D0887_RS00550 PF01381 Helix-turn-helix D0887_RS00550 PF00717 Peptidase S24-like D0887_RS00575 PF04851 Type III restriction enzyme, res subunit D0887_RS00575 PF00271 Helicase conserved C-terminal domain D0887_RS00590 PF05063 MT-A70 D0887_RS00610 PF00182 Chitinase class I D0887_RS00645 PF03354 Phage Terminase D0887_RS00700 PF13974 YebO-like protein D0887_RS00750 PF00239 Resolvase, N terminal domain D0887_RS00750 PF02796 Helix-turn-helix domain of resolvase D0887_RS00775 PF01226 Formate/nitrite transporter D0887_RS00780 PF04333 MlaA lipoprotein D0887_RS00785 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) D0887_RS00795 PF04175 Protein of unknown function (DUF406) D0887_RS00800 PF00108 Thiolase, N-terminal domain D0887_RS00800 PF02803 Thiolase, C-terminal domain D0887_RS00805 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain D0887_RS00805 PF00378 Enoyl-CoA hydratase/isomerase D0887_RS00805 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain D0887_RS00810 PF00300 Histidine phosphatase superfamily (branch 1) D0887_RS00815 PF01713 Smr domain D0887_RS00820 PF05175 Methyltransferase small domain D0887_RS00825 PF01264 Chorismate synthase D0887_RS00830 PF03411 Penicillin-insensitive murein endopeptidase D0887_RS00835 PF01925 Sulfite exporter TauE/SafE D0887_RS00840 PF04315 Elongation factor P hydroxylase D0887_RS00845 PF08891 YfcL protein D0887_RS00850 PF05430 S-adenosyl-L-methionine-dependent methyltransferase D0887_RS00850 PF01266 FAD dependent oxidoreductase D0887_RS00855 PF00109 Beta-ketoacyl synthase, N-terminal domain D0887_RS00855 PF02801 Beta-ketoacyl synthase, C-terminal domain D0887_RS00860 PF07690 Major Facilitator Superfamily D0887_RS00870 PF11890 Domain of unknown function (DUF3410) D0887_RS00870 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D0887_RS00870 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D0887_RS00875 PF01118 Semialdehyde dehydrogenase, NAD binding domain D0887_RS00875 PF02774 Semialdehyde dehydrogenase, dimerisation domain D0887_RS00880 PF01416 tRNA pseudouridine synthase D0887_RS00885 PF09335 SNARE associated Golgi protein D0887_RS00890 PF17848 Acetyl-coA carboxylase zinc finger domain D0887_RS00890 PF01039 Carboxyl transferase domain D0887_RS00895 PF02875 Mur ligase family, glutamate ligase domain D0887_RS00895 PF08245 Mur ligase middle domain D0887_RS00900 PF05036 Sporulation related domain D0887_RS00905 PF02674 Colicin V production protein D0887_RS00910 PF00156 Phosphoribosyl transferase domain D0887_RS00915 PF02441 Flavoprotein D0887_RS00920 PF00497 Bacterial extracellular solute-binding proteins, family 3 D0887_RS00925 PF00497 Bacterial extracellular solute-binding proteins, family 3 D0887_RS00930 PF00528 Binding-protein-dependent transport system inner membrane component D0887_RS00935 PF00528 Binding-protein-dependent transport system inner membrane component D0887_RS00940 PF00005 ABC transporter D0887_RS00945 PF13302 Acetyltransferase (GNAT) domain D0887_RS00950 PF08338 Domain of unknown function (DUF1731) D0887_RS00950 PF01370 NAD dependent epimerase/dehydratase family D0887_RS00955 PF02152 Dihydroneopterin aldolase D0887_RS00960 PF00043 Glutathione S-transferase, C-terminal domain D0887_RS00960 PF02798 Glutathione S-transferase, N-terminal domain D0887_RS00965 PF14834 Glutathione S-transferase, C-terminal domain D0887_RS00965 PF02798 Glutathione S-transferase, N-terminal domain D0887_RS00970 PF12850 Calcineurin-like phosphoesterase superfamily domain D0887_RS00975 PF00293 NUDIX domain D0887_RS00980 PF01515 Phosphate acetyl/butaryl transferase D0887_RS00980 PF07085 DRTGG domain D0887_RS00985 PF00871 Acetokinase family D0887_RS00990 PF04217 Protein of unknown function, DUF412 D0887_RS00995 PF03887 YfbU domain D0887_RS01000 PF13419 Haloacid dehalogenase-like hydrolase D0887_RS01005 PF03600 Citrate transporter D0887_RS01005 PF02080 TrkA-C domain D0887_RS01015 PF00155 Aminotransferase class I and II D0887_RS01020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0887_RS01020 PF03466 LysR substrate binding domain D0887_RS01035 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 D0887_RS01040 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit D0887_RS01045 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit D0887_RS01045 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit D0887_RS01055 PF10531 SLBB domain D0887_RS01055 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit D0887_RS01055 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region D0887_RS01060 PF01568 Molydopterin dinucleotide binding domain D0887_RS01060 PF00384 Molybdopterin oxidoreductase D0887_RS01060 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D0887_RS01060 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region D0887_RS01065 PF00146 NADH dehydrogenase D0887_RS01070 PF12838 4Fe-4S dicluster domain D0887_RS01075 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 D0887_RS01080 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L D0887_RS01085 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus D0887_RS01085 PF00361 Proton-conducting membrane transporter D0887_RS01090 PF00361 Proton-conducting membrane transporter D0887_RS01095 PF00361 Proton-conducting membrane transporter D0887_RS01100 PF12706 Beta-lactamase superfamily domain D0887_RS01105 PF13673 Acetyltransferase (GNAT) domain D0887_RS01110 PF00425 chorismate binding enzyme D0887_RS01115 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D0887_RS01115 PF16582 Middle domain of thiamine pyrophosphate D0887_RS01115 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D0887_RS01120 PF12697 Alpha/beta hydrolase family D0887_RS01125 PF00378 Enoyl-CoA hydratase/isomerase D0887_RS01130 PF13378 Enolase C-terminal domain-like D0887_RS01135 PF13193 AMP-binding enzyme C-terminal domain D0887_RS01135 PF00501 AMP-binding enzyme D0887_RS01140 PF00293 NUDIX domain D0887_RS01145 PF04754 Putative transposase, YhgA-like D0887_RS01150 PF07437 YfaZ precursor D0887_RS01155 PF00994 Probable molybdopterin binding domain D0887_RS01160 PF01614 Bacterial transcriptional regulator D0887_RS01160 PF09339 IclR helix-turn-helix domain D0887_RS01165 PF13378 Enolase C-terminal domain-like D0887_RS01165 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain D0887_RS01170 PF07690 Major Facilitator Superfamily D0887_RS01175 PF03328 HpcH/HpaI aldolase/citrate lyase family D0887_RS01180 PF13183 4Fe-4S dicluster domain D0887_RS01180 PF02754 Cysteine-rich domain D0887_RS01185 PF00890 FAD binding domain D0887_RS01190 PF01266 FAD dependent oxidoreductase D0887_RS01190 PF04324 BFD-like [2Fe-2S] binding domain D0887_RS01195 PF07690 Major Facilitator Superfamily D0887_RS01200 PF03009 Glycerophosphoryl diester phosphodiesterase family D0887_RS01210 PF00111 2Fe-2S iron-sulfur cluster binding domain D0887_RS01215 PF00268 Ribonucleotide reductase, small chain D0887_RS01220 PF00317 Ribonucleotide reductase, all-alpha domain D0887_RS01220 PF03477 ATP cone domain D0887_RS01220 PF02867 Ribonucleotide reductase, barrel domain D0887_RS01235 PF00521 DNA gyrase/topoisomerase IV, subunit A D0887_RS01235 PF03989 DNA gyrase C-terminal domain, beta-propeller D0887_RS01240 PF00512 His Kinase A (phospho-acceptor) domain D0887_RS01240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0887_RS01240 PF00072 Response regulator receiver domain D0887_RS01240 PF09456 RcsC Alpha-Beta-Loop (ABL) D0887_RS01245 PF00072 Response regulator receiver domain D0887_RS01245 PF00196 Bacterial regulatory proteins, luxR family D0887_RS01250 PF01627 Hpt domain D0887_RS01250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0887_RS01250 PF16359 RcsD-ABL domain D0887_RS01255 PF00267 Gram-negative porin D0887_RS01260 PF02424 ApbE family D0887_RS01265 PF12833 Helix-turn-helix domain D0887_RS01265 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain D0887_RS01265 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain D0887_RS01265 PF02805 Metal binding domain of Ada D0887_RS01270 PF13532 2OG-Fe(II) oxygenase superfamily D0887_RS01275 PF00005 ABC transporter D0887_RS01280 PF03448 MgtE intracellular N domain D0887_RS01280 PF01769 Divalent cation transporter D0887_RS01280 PF00571 CBS domain D0887_RS01285 PF01740 STAS domain D0887_RS01285 PF00916 Sulfate permease family D0887_RS01290 PF06039 Malate:quinone oxidoreductase (Mqo) D0887_RS01295 PF03974 Ecotin D0887_RS01300 PF01594 AI-2E family transporter D0887_RS01370 PF13132 Domain of unknown function (DUF3950) D0887_RS01390 PF13356 Arm DNA-binding domain D0887_RS01390 PF00589 Phage integrase family D0887_RS01400 PF00884 Sulfatase D0887_RS01400 PF11893 Domain of unknown function (DUF3413) D0887_RS01405 PF07208 Protein of unknown function (DUF1414) D0887_RS01410 PF04245 37-kD nucleoid-associated bacterial protein D0887_RS01415 PF08220 DeoR-like helix-turn-helix domain D0887_RS01415 PF00455 DeoR C terminal sensor domain D0887_RS01420 PF00293 NUDIX domain D0887_RS01425 PF00144 Beta-lactamase D0887_RS01435 PF01386 Ribosomal L25p family D0887_RS01440 PF04851 Type III restriction enzyme, res subunit D0887_RS01440 PF00271 Helicase conserved C-terminal domain D0887_RS01445 PF00849 RNA pseudouridylate synthase D0887_RS01445 PF01479 S4 domain D0887_RS01450 PF07690 Major Facilitator Superfamily D0887_RS01455 PF13989 YejG-like protein D0887_RS01460 PF00005 ABC transporter D0887_RS01460 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D0887_RS01465 PF00528 Binding-protein-dependent transport system inner membrane component D0887_RS01465 PF12911 N-terminal TM domain of oligopeptide transport permease C D0887_RS01470 PF00528 Binding-protein-dependent transport system inner membrane component D0887_RS01475 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D0887_RS01480 PF12792 CSS motif domain associated with EAL D0887_RS01480 PF00563 EAL domain D0887_RS01485 PF00877 NlpC/P60 family D0887_RS01490 PF01569 PAP2 superfamily D0887_RS01495 PF02492 CobW/HypB/UreG, nucleotide-binding domain D0887_RS01495 PF07683 Cobalamin synthesis protein cobW C-terminal domain D0887_RS01500 PF01232 Mannitol dehydrogenase Rossmann domain D0887_RS01500 PF08125 Mannitol dehydrogenase C-terminal domain D0887_RS01505 PF03786 D-mannonate dehydratase (UxuA) D0887_RS01510 PF08207 Elongation factor P (EF-P) KOW-like domain D0887_RS01510 PF09285 Elongation factor P, C-terminal D0887_RS01510 PF01132 Elongation factor P (EF-P) OB domain D0887_RS01515 PF03692 Putative zinc- or iron-chelating domain D0887_RS01525 PF07690 Major Facilitator Superfamily D0887_RS01535 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D0887_RS01535 PF00381 PTS HPr component phosphorylation site D0887_RS01540 PF00294 pfkB family carbohydrate kinase D0887_RS01545 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit D0887_RS01545 PF02378 Phosphotransferase system, EIIC D0887_RS01550 PF01261 Xylose isomerase-like TIM barrel D0887_RS01555 PF03601 Conserved hypothetical protein 698 D0887_RS01565 PF03466 LysR substrate binding domain D0887_RS01565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0887_RS01570 PF00324 Amino acid permease D0887_RS01580 PF00593 TonB dependent receptor D0887_RS01580 PF07715 TonB-dependent Receptor Plug Domain D0887_RS01585 PF00756 Putative esterase D0887_RS01590 PF01227 GTP cyclohydrolase I D0887_RS01600 PF00356 Bacterial regulatory proteins, lacI family D0887_RS01605 PF13407 Periplasmic binding protein domain D0887_RS01610 PF00005 ABC transporter D0887_RS01615 PF02653 Branched-chain amino acid transport system / permease component D0887_RS01620 PF02698 DUF218 domain D0887_RS01625 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region D0887_RS01625 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region D0887_RS01630 PF04172 LrgB-like family D0887_RS01635 PF03788 LrgA family D0887_RS01640 PF01207 Dihydrouridine synthase (Dus) D0887_RS01650 PF03123 CAT RNA binding domain D0887_RS01650 PF00874 PRD domain D0887_RS01655 PF00367 phosphotransferase system, EIIB D0887_RS01655 PF02378 Phosphotransferase system, EIIC D0887_RS01655 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 D0887_RS01660 PF00232 Glycosyl hydrolase family 1 D0887_RS01670 PF02321 Outer membrane efflux protein D0887_RS01675 PF09335 SNARE associated Golgi protein D0887_RS01680 PF04893 Yip1 domain D0887_RS01685 PF00768 D-alanyl-D-alanine carboxypeptidase D0887_RS01695 PF01565 FAD binding domain D0887_RS01695 PF09330 D-lactate dehydrogenase, membrane binding D0887_RS01700 PF14310 Fibronectin type III-like domain D0887_RS01700 PF01915 Glycosyl hydrolase family 3 C-terminal domain D0887_RS01700 PF00933 Glycosyl hydrolase family 3 N terminal domain D0887_RS01705 PF04069 Substrate binding domain of ABC-type glycine betaine transport system D0887_RS01710 PF00528 Binding-protein-dependent transport system inner membrane component D0887_RS01715 PF00005 ABC transporter D0887_RS01720 PF00528 Binding-protein-dependent transport system inner membrane component D0887_RS01730 PF06580 Histidine kinase D0887_RS01730 PF07694 5TMR of 5TMR-LYT D0887_RS01735 PF00072 Response regulator receiver domain D0887_RS01735 PF04397 LytTr DNA-binding domain D0887_RS01740 PF07308 Protein of unknown function (DUF1456) D0887_RS01745 PF01588 Putative tRNA binding domain D0887_RS01745 PF09334 tRNA synthetases class I (M) D0887_RS01750 PF10609 NUBPL iron-transfer P-loop NTPase D0887_RS01760 PF11776 Nickel/cobalt transporter regulator D0887_RS01765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0887_RS01765 PF03466 LysR substrate binding domain D0887_RS01770 PF00860 Permease family D0887_RS01775 PF01979 Amidohydrolase family D0887_RS01775 PF13382 Adenine deaminase C-terminal domain D0887_RS01780 PF03466 LysR substrate binding domain D0887_RS01780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0887_RS01790 PF02110 Hydroxyethylthiazole kinase family D0887_RS01795 PF08543 Phosphomethylpyrimidine kinase D0887_RS01800 PF01791 DeoC/LacD family aldolase D0887_RS01805 PF07690 Major Facilitator Superfamily D0887_RS01815 PF00106 short chain dehydrogenase D0887_RS01820 PF00356 Bacterial regulatory proteins, lacI family D0887_RS01825 PF04198 Putative sugar-binding domain D0887_RS01830 PF01232 Mannitol dehydrogenase Rossmann domain D0887_RS01830 PF08125 Mannitol dehydrogenase C-terminal domain D0887_RS01835 PF00370 FGGY family of carbohydrate kinases, N-terminal domain D0887_RS01835 PF02782 FGGY family of carbohydrate kinases, C-terminal domain D0887_RS01840 PF07690 Major Facilitator Superfamily D0887_RS01845 PF13419 Haloacid dehalogenase-like hydrolase D0887_RS01850 PF13378 Enolase C-terminal domain-like D0887_RS01850 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain D0887_RS01855 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D0887_RS01860 PF00528 Binding-protein-dependent transport system inner membrane component D0887_RS01865 PF00528 Binding-protein-dependent transport system inner membrane component D0887_RS01865 PF12911 N-terminal TM domain of oligopeptide transport permease C D0887_RS01870 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D0887_RS01870 PF00005 ABC transporter D0887_RS01875 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D0887_RS01875 PF00005 ABC transporter D0887_RS01880 PF00781 Diacylglycerol kinase catalytic domain D0887_RS01885 PF01136 Peptidase family U32 D0887_RS01885 PF16325 Peptidase family U32 C-terminal domain D0887_RS01890 PF00072 Response regulator receiver domain D0887_RS01890 PF00486 Transcriptional regulatory protein, C terminal D0887_RS01895 PF00672 HAMP domain D0887_RS01895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0887_RS01895 PF00512 His Kinase A (phospho-acceptor) domain D0887_RS01900 PF07690 Major Facilitator Superfamily D0887_RS01905 PF00873 AcrB/AcrD/AcrF family D0887_RS01910 PF00873 AcrB/AcrD/AcrF family D0887_RS01915 PF13533 Biotin-lipoyl like D0887_RS01920 PF00375 Sodium:dicarboxylate symporter family D0887_RS01930 PF00072 Response regulator receiver domain D0887_RS01930 PF00486 Transcriptional regulatory protein, C terminal D0887_RS01935 PF13426 PAS domain D0887_RS01935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0887_RS01935 PF00512 His Kinase A (phospho-acceptor) domain D0887_RS01935 PF00672 HAMP domain D0887_RS01940 PF00012 Hsp70 protein D0887_RS01950 PF00730 HhH-GPD superfamily base excision DNA repair protein D0887_RS01950 PF06029 AlkA N-terminal domain D0887_RS01955 PF00485 Phosphoribulokinase / Uridine kinase family D0887_RS01960 PF00692 dUTPase D0887_RS01965 PF05170 AsmA family D0887_RS01970 PF03741 Integral membrane protein TerC family D0887_RS01970 PF00571 CBS domain D0887_RS01970 PF03471 Transporter associated domain D0887_RS01975 PF00483 Nucleotidyl transferase D0887_RS01980 PF01569 PAP2 superfamily D0887_RS01985 PF14052 Capsule assembly protein Wzi D0887_RS01990 PF18412 Outer-membrane lipoprotein Wza C-terminal domain D0887_RS01990 PF02563 Polysaccharide biosynthesis/export protein D0887_RS01990 PF10531 SLBB domain D0887_RS01995 PF01451 Low molecular weight phosphotyrosine protein phosphatase D0887_RS02000 PF13807 G-rich domain on putative tyrosine kinase D0887_RS02000 PF02706 Chain length determinant protein D0887_RS02000 PF13614 AAA domain D0887_RS02025 PF00535 Glycosyl transferase family 2 D0887_RS02025 PF01501 Glycosyl transferase family 8 D0887_RS02035 PF00534 Glycosyl transferases group 1 D0887_RS02035 PF13439 Glycosyltransferase Family 4 D0887_RS02040 PF00534 Glycosyl transferases group 1 D0887_RS02040 PF13439 Glycosyltransferase Family 4 D0887_RS02045 PF02397 Bacterial sugar transferase D0887_RS02050 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain D0887_RS02050 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D0887_RS02055 PF01050 Mannose-6-phosphate isomerase D0887_RS02055 PF00483 Nucleotidyl transferase D0887_RS02060 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain D0887_RS02060 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II D0887_RS02060 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III D0887_RS02060 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I D0887_RS02065 PF16363 GDP-mannose 4,6 dehydratase D0887_RS02070 PF00483 Nucleotidyl transferase D0887_RS02075 PF04321 RmlD substrate binding domain D0887_RS02080 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase D0887_RS02085 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain D0887_RS02085 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain D0887_RS02085 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain D0887_RS02105 PF01370 NAD dependent epimerase/dehydratase family D0887_RS02110 PF01061 ABC-2 type transporter D0887_RS02115 PF00005 ABC transporter D0887_RS02125 PF03275 UDP-galactopyranose mutase D0887_RS02135 PF13439 Glycosyltransferase Family 4 D0887_RS02135 PF00534 Glycosyl transferases group 1 D0887_RS02140 PF00535 Glycosyl transferase family 2 D0887_RS02145 PF01502 Phosphoribosyl-AMP cyclohydrolase D0887_RS02145 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase D0887_RS02150 PF00977 Histidine biosynthesis protein D0887_RS02155 PF00977 Histidine biosynthesis protein D0887_RS02160 PF00117 Glutamine amidotransferase class-I D0887_RS02165 PF08645 Polynucleotide kinase 3 phosphatase D0887_RS02165 PF00475 Imidazoleglycerol-phosphate dehydratase D0887_RS02170 PF00155 Aminotransferase class I and II D0887_RS02175 PF00815 Histidinol dehydrogenase D0887_RS02180 PF08029 HisG, C-terminal domain D0887_RS02180 PF01634 ATP phosphoribosyltransferase D0887_RS02190 PF01370 NAD dependent epimerase/dehydratase family D0887_RS02195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0887_RS02195 PF03466 LysR substrate binding domain D0887_RS02205 PF13520 Amino acid permease D0887_RS02210 PF01022 Bacterial regulatory protein, arsR family D0887_RS02215 PF00679 Elongation factor G C-terminus D0887_RS02215 PF03764 Elongation factor G, domain IV D0887_RS02215 PF00009 Elongation factor Tu GTP binding domain D0887_RS02215 PF14492 Elongation Factor G, domain II D0887_RS02215 PF03144 Elongation factor Tu domain 2 D0887_RS02220 PF00929 Exonuclease D0887_RS02220 PF08411 Exonuclease C-terminal D0887_RS02225 PF00768 D-alanyl-D-alanine carboxypeptidase D0887_RS02225 PF07943 Penicillin-binding protein 5, C-terminal domain D0887_RS02230 PF06445 GyrI-like small molecule binding domain D0887_RS02235 PF04632 Fusaric acid resistance protein family D0887_RS02240 PF04363 Protein of unknown function (DUF496) D0887_RS02245 PF02654 Cobalamin-5-phosphate synthase D0887_RS02250 PF02277 Phosphoribosyltransferase D0887_RS02255 PF05221 S-adenosyl-L-homocysteine hydrolase D0887_RS02255 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain D0887_RS02265 PF14552 Tautomerase enzyme D0887_RS02270 PF03466 LysR substrate binding domain D0887_RS02270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0887_RS02280 PF00083 Sugar (and other) transporter D0887_RS02280 PF07690 Major Facilitator Superfamily D0887_RS02295 PF00990 Diguanylate cyclase, GGDEF domain D0887_RS02295 PF13188 PAS domain D0887_RS02295 PF00563 EAL domain D0887_RS02295 PF03707 Bacterial signalling protein N terminal repeat D0887_RS02305 PF09313 Domain of unknown function (DUF1971) D0887_RS02310 PF08956 Domain of unknown function (DUF1869) D0887_RS02315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0887_RS02315 PF03466 LysR substrate binding domain D0887_RS02325 PF00561 alpha/beta hydrolase fold D0887_RS02330 PF00990 Diguanylate cyclase, GGDEF domain D0887_RS02365 PF02481 DNA recombination-mediator protein A D0887_RS02365 PF17782 DprA winged helix domain D0887_RS02380 PF08401 Domain of unknown function (DUF1738) D0887_RS02380 PF18818 Metallopeptidase superfamily domain D0887_RS02420 PF00437 Type II/IV secretion system protein D0887_RS02425 PF03743 Bacterial conjugation TrbI-like protein D0887_RS02430 PF03524 Conjugal transfer protein D0887_RS02455 PF03135 CagE, TrbE, VirB family, component of type IV transporter system D0887_RS02460 PF04956 TrbC/VIRB2 family D0887_RS02505 PF00593 TonB dependent receptor D0887_RS02505 PF07715 TonB-dependent Receptor Plug Domain D0887_RS02510 PF00501 AMP-binding enzyme D0887_RS02510 PF13193 AMP-binding enzyme C-terminal domain D0887_RS02515 PF00975 Thioesterase domain D0887_RS02525 PF02801 Beta-ketoacyl synthase, C-terminal domain D0887_RS02525 PF00550 Phosphopantetheine attachment site D0887_RS02525 PF16197 Ketoacyl-synthetase C-terminal extension D0887_RS02525 PF00668 Condensation domain D0887_RS02525 PF00109 Beta-ketoacyl synthase, N-terminal domain D0887_RS02525 PF00698 Acyl transferase domain D0887_RS02530 PF00550 Phosphopantetheine attachment site D0887_RS02530 PF00501 AMP-binding enzyme D0887_RS02530 PF00668 Condensation domain D0887_RS02530 PF08242 Methyltransferase domain D0887_RS02540 PF00664 ABC transporter transmembrane region D0887_RS02540 PF04954 Siderophore-interacting protein D0887_RS02540 PF08021 Siderophore-interacting FAD-binding domain D0887_RS02540 PF00005 ABC transporter D0887_RS02545 PF00664 ABC transporter transmembrane region D0887_RS02545 PF00005 ABC transporter D0887_RS02550 PF07690 Major Facilitator Superfamily D0887_RS02555 PF00425 chorismate binding enzyme D0887_RS02560 PF13356 Arm DNA-binding domain D0887_RS02560 PF00589 Phage integrase family D0887_RS02580 PF01032 FecCD transport family D0887_RS02585 PF01475 Ferric uptake regulator family D0887_RS02595 PF02492 CobW/HypB/UreG, nucleotide-binding domain D0887_RS02595 PF07683 Cobalamin synthesis protein cobW C-terminal domain D0887_RS02615 PF01406 tRNA synthetases class I (C) catalytic domain D0887_RS02615 PF09190 DALR domain D0887_RS02625 PF07683 Cobalamin synthesis protein cobW C-terminal domain D0887_RS02625 PF02492 CobW/HypB/UreG, nucleotide-binding domain D0887_RS02630 PF01258 Prokaryotic dksA/traR C4-type zinc finger D0887_RS02635 PF02649 Type I GTP cyclohydrolase folE2 D0887_RS02640 PF00132 Bacterial transferase hexapeptide (six repeats) D0887_RS02655 PF00950 ABC 3 transport family D0887_RS02665 PF01297 Zinc-uptake complex component A periplasmic D0887_RS02670 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain D0887_RS02670 PF03129 Anticodon binding domain D0887_RS02670 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) D0887_RS02670 PF02824 TGS domain D0887_RS02680 PF01979 Amidohydrolase family D0887_RS02685 PF00490 Delta-aminolevulinic acid dehydratase D0887_RS02695 PF01266 FAD dependent oxidoreductase D0887_RS02695 PF05430 S-adenosyl-L-methionine-dependent methyltransferase D0887_RS02710 PF01297 Zinc-uptake complex component A periplasmic D0887_RS02715 PF00950 ABC 3 transport family D0887_RS02720 PF00005 ABC transporter D0887_RS02730 PF00589 Phage integrase family D0887_RS02730 PF13356 Arm DNA-binding domain D0887_RS02740 PF01554 MatE D0887_RS02750 PF01048 Phosphorylase superfamily D0887_RS02750 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus D0887_RS02760 PF12146 Serine aminopeptidase, S33 D0887_RS02770 PF00107 Zinc-binding dehydrogenase D0887_RS02770 PF08240 Alcohol dehydrogenase GroES-like domain D0887_RS02775 PF16925 Tetracyclin repressor-like, C-terminal domain D0887_RS02775 PF00440 Bacterial regulatory proteins, tetR family D0887_RS02780 PF00999 Sodium/hydrogen exchanger family D0887_RS02790 PF03466 LysR substrate binding domain D0887_RS02790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0887_RS02795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0887_RS02795 PF03466 LysR substrate binding domain D0887_RS02800 PF03734 L,D-transpeptidase catalytic domain D0887_RS02800 PF17969 L,D-transpeptidase C-terminal domain D0887_RS02810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0887_RS02810 PF03466 LysR substrate binding domain D0887_RS02820 PF06167 Glucose-regulated metallo-peptidase M90 D0887_RS02830 PF00267 Gram-negative porin D0887_RS02845 PF01966 HD domain D0887_RS02850 PF18284 DNA methylase N-terminal domain D0887_RS02850 PF00145 C-5 cytosine-specific DNA methylase D0887_RS02855 PF03852 DNA mismatch endonuclease Vsr D0887_RS02860 PF00892 EamA-like transporter family D0887_RS02865 PF05661 Protein of unknown function (DUF808) D0887_RS02870 PF00990 Diguanylate cyclase, GGDEF domain D0887_RS02870 PF17151 Periplasmic sensor domain D0887_RS02875 PF10733 Protein of unknown function (DUF2525) D0887_RS02880 PF10781 Dextransucrase DSRB D0887_RS02885 PF00196 Bacterial regulatory proteins, luxR family D0887_RS02890 PF13987 YedD-like protein D0887_RS02895 PF02806 Alpha amylase, C-terminal all-beta domain D0887_RS02895 PF00128 Alpha amylase, catalytic domain D0887_RS02900 PF00497 Bacterial extracellular solute-binding proteins, family 3 D0887_RS02905 PF00291 Pyridoxal-phosphate dependent enzyme D0887_RS02910 PF00528 Binding-protein-dependent transport system inner membrane component D0887_RS02915 PF00005 ABC transporter D0887_RS02920 PF00196 Bacterial regulatory proteins, luxR family D0887_RS02920 PF03472 Autoinducer binding domain D0887_RS02925 PF10769 Protein of unknown function (DUF2594) D0887_RS02930 PF00072 Response regulator receiver domain D0887_RS02930 PF00196 Bacterial regulatory proteins, luxR family D0887_RS02935 PF02151 UvrB/uvrC motif D0887_RS02935 PF01541 GIY-YIG catalytic domain D0887_RS02935 PF08459 UvrC Helix-hairpin-helix N-terminal D0887_RS02940 PF01066 CDP-alcohol phosphatidyltransferase D0887_RS03025 PF03796 DnaB-like helicase C terminal domain D0887_RS03025 PF00772 DnaB-like helicase N terminal domain D0887_RS03075 PF13737 Transposase DDE domain D0887_RS03185 PF04971 Bacteriophage P21 holin S D0887_RS03190 PF00959 Phage lysozyme D0887_RS03205 PF00701 Dihydrodipicolinate synthetase family D0887_RS03210 PF03695 Uncharacterised protein family (UPF0149) D0887_RS03210 PF02810 SEC-C motif D0887_RS03215 PF03222 Tryptophan/tyrosine permease family D0887_RS03220 PF10678 Protein of unknown function (DUF2492) D0887_RS03225 PF00210 Ferritin-like domain D0887_RS03240 PF07690 Major Facilitator Superfamily D0887_RS03245 PF10964 Protein of unknown function (DUF2766) D0887_RS03260 PF00210 Ferritin-like domain D0887_RS03270 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family D0887_RS03275 PF00005 ABC transporter D0887_RS03280 PF02653 Branched-chain amino acid transport system / permease component D0887_RS03285 PF02358 Trehalose-phosphatase D0887_RS03290 PF00982 Glycosyltransferase family 20 D0887_RS03295 PF00582 Universal stress protein family D0887_RS03305 PF07470 Glycosyl Hydrolase Family 88 D0887_RS03310 PF03485 Arginyl tRNA synthetase N terminal domain D0887_RS03310 PF00750 tRNA synthetases class I (R) D0887_RS03310 PF05746 DALR anticodon binding domain D0887_RS03315 PF06185 YecM protein D0887_RS03320 PF03932 CutC family D0887_RS03325 PF08003 Protein of unknown function (DUF1698) D0887_RS03330 PF13649 Methyltransferase domain D0887_RS03335 PF01124 MAPEG family D0887_RS03345 PF00589 Phage integrase family D0887_RS03345 PF12167 Arm DNA-binding domain D0887_RS03420 PF01381 Helix-turn-helix D0887_RS03420 PF00717 Peptidase S24-like D0887_RS03520 PF00959 Phage lysozyme D0887_RS03625 PF01381 Helix-turn-helix D0887_RS03625 PF00717 Peptidase S24-like D0887_RS03705 PF00717 Peptidase S24-like D0887_RS03715 PF00857 Isochorismatase family D0887_RS03720 PF02938 GAD domain D0887_RS03720 PF00152 tRNA synthetases class II (D, K and N) D0887_RS03720 PF01336 OB-fold nucleic acid binding domain D0887_RS03725 PF00293 NUDIX domain D0887_RS03730 PF01709 Transcriptional regulator D0887_RS03735 PF02075 Crossover junction endodeoxyribonuclease RuvC D0887_RS03740 PF07499 RuvA, C-terminal domain D0887_RS03740 PF01330 RuvA N terminal domain D0887_RS03745 PF05496 Holliday junction DNA helicase RuvB P-loop domain D0887_RS03745 PF05491 RuvB C-terminal winged helix domain D0887_RS03745 PF17864 RuvB AAA lid domain D0887_RS03750 PF00950 ABC 3 transport family D0887_RS03755 PF00005 ABC transporter D0887_RS03760 PF01297 Zinc-uptake complex component A periplasmic D0887_RS03765 PF01476 LysM domain D0887_RS03765 PF08525 Opacity-associated protein A N-terminal motif D0887_RS03765 PF01551 Peptidase family M23 D0887_RS03770 PF03279 Bacterial lipid A biosynthesis acyltransferase D0887_RS03775 PF02887 Pyruvate kinase, alpha/beta domain D0887_RS03775 PF00224 Pyruvate kinase, barrel domain D0887_RS03780 PF01418 Helix-turn-helix domain, rpiR family D0887_RS03780 PF01380 SIS domain D0887_RS03795 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain D0887_RS03795 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain D0887_RS03800 PF00920 Dehydratase family D0887_RS03805 PF01081 KDPG and KHG aldolase D0887_RS03810 PF02222 ATP-grasp domain D0887_RS03815 PF07130 YebG protein D0887_RS03820 PF04391 Protein of unknown function (DUF533) D0887_RS03825 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain D0887_RS03825 PF00326 Prolyl oligopeptidase family D0887_RS03830 PF00929 Exonuclease D0887_RS03835 PF06440 DNA polymerase III, theta subunit D0887_RS03840 PF04234 CopC domain D0887_RS03845 PF05425 Copper resistance protein D D0887_RS03850 PF10709 Protein of unknown function (DUF2511) D0887_RS03860 PF04393 Protein of unknown function (DUF535) D0887_RS03865 PF00149 Calcineurin-like phosphoesterase D0887_RS03870 PF07358 Protein of unknown function (DUF1482) D0887_RS03875 PF07351 Protein of unknown function (DUF1480) D0887_RS03880 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF D0887_RS03880 PF01189 16S rRNA methyltransferase RsmB/F D0887_RS03880 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF D0887_RS03885 PF02470 MlaD protein D0887_RS03890 PF04403 Paraquat-inducible protein A D0887_RS03895 PF13185 GAF domain D0887_RS03900 PF04352 ProQ/FINO family D0887_RS03900 PF17516 ProQ C-terminal domain D0887_RS03905 PF00595 PDZ domain D0887_RS03905 PF03572 Peptidase family S41 D0887_RS03905 PF17804 Tail specific protease N-terminal domain D0887_RS03905 PF11818 C-terminal domain of tail specific protease (DUF3340) D0887_RS03910 PF01435 Peptidase family M48 D0887_RS03915 PF07690 Major Facilitator Superfamily D0887_RS03925 PF01614 Bacterial transcriptional regulator D0887_RS03925 PF09339 IclR helix-turn-helix domain D0887_RS03930 PF13996 YobH-like protein D0887_RS03935 PF13998 MgrB protein D0887_RS03940 PF13974 YebO-like protein D0887_RS03955 PF10736 Protein of unknown function (DUF2627) D0887_RS03960 PF00313 'Cold-shock' DNA-binding domain D0887_RS03965 PF03717 Penicillin-binding Protein dimerisation domain D0887_RS03965 PF00905 Penicillin binding protein transpeptidase domain D0887_RS03970 PF13847 Methyltransferase domain D0887_RS03975 PF02659 Putative manganese efflux pump D0887_RS03980 PF06173 Protein of unknown function (DUF986) D0887_RS03985 PF03613 PTS system mannose/fructose/sorbose family IID component D0887_RS03990 PF03609 PTS system sorbose-specific iic component D0887_RS03995 PF03830 PTS system sorbose subfamily IIB component D0887_RS03995 PF03610 PTS system fructose IIA component D0887_RS04000 PF03471 Transporter associated domain D0887_RS04000 PF03741 Integral membrane protein TerC family D0887_RS04005 PF00563 EAL domain D0887_RS04005 PF12792 CSS motif domain associated with EAL D0887_RS04010 PF03315 Serine dehydratase beta chain D0887_RS04010 PF03313 Serine dehydratase alpha chain D0887_RS04015 PF00293 NUDIX domain D0887_RS04020 PF00425 chorismate binding enzyme D0887_RS04020 PF04715 Anthranilate synthase component I, N terminal region D0887_RS04025 PF03701 Uncharacterised protein family (UPF0181) D0887_RS04030 PF01042 Endoribonuclease L-PSP D0887_RS04035 PF04851 Type III restriction enzyme, res subunit D0887_RS04035 PF13307 Helicase C-terminal domain D0887_RS04040 PF00814 Glycoprotease family D0887_RS04045 PF03843 Outer membrane lipoprotein Slp family D0887_RS04050 PF00501 AMP-binding enzyme D0887_RS04050 PF13193 AMP-binding enzyme C-terminal domain D0887_RS04055 PF00570 HRDC domain D0887_RS04055 PF01612 3'-5' exonuclease D0887_RS04060 PF03776 Septum formation topological specificity factor MinE D0887_RS04065 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain D0887_RS04070 PF05209 Septum formation inhibitor MinC, N-terminal domain D0887_RS04070 PF03775 Septum formation inhibitor MinC, C-terminal domain D0887_RS04075 PF05166 YcgL domain D0887_RS04080 PF01557 Fumarylacetoacetate (FAA) hydrolase family D0887_RS04085 PF03692 Putative zinc- or iron-chelating domain D0887_RS04095 PF02600 Disulfide bond formation protein DsbB D0887_RS04100 PF06450 Bacterial Na+/H+ antiporter B (NhaB) D0887_RS04105 PF07840 FadR C-terminal domain D0887_RS04105 PF00392 Bacterial regulatory proteins, gntR family D0887_RS04110 PF04293 SpoVR like protein D0887_RS04115 PF01266 FAD dependent oxidoreductase D0887_RS04120 PF00842 Alanine racemase, C-terminal domain D0887_RS04120 PF01168 Alanine racemase, N-terminal domain D0887_RS04125 PF02080 TrkA-C domain D0887_RS04125 PF00999 Sodium/hydrogen exchanger family D0887_RS04125 PF03471 Transporter associated domain D0887_RS04130 PF02016 LD-carboxypeptidase N-terminal domain D0887_RS04130 PF17676 LD-carboxypeptidase C-terminal domain D0887_RS04135 PF01464 Transglycosylase SLT domain D0887_RS04140 PF00593 TonB dependent receptor D0887_RS04140 PF07715 TonB-dependent Receptor Plug Domain D0887_RS04145 PF01204 Trehalase D0887_RS04155 PF14403 Circularly permuted ATP-grasp type 2 D0887_RS04205 PF03466 LysR substrate binding domain D0887_RS04205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0887_RS04210 PF00291 Pyridoxal-phosphate dependent enzyme D0887_RS04215 PF03222 Tryptophan/tyrosine permease family D0887_RS04220 PF00871 Acetokinase family D0887_RS04225 PF01228 Glycine radical D0887_RS04225 PF02901 Pyruvate formate lyase-like D0887_RS04230 PF13458 Periplasmic binding protein D0887_RS04235 PF02653 Branched-chain amino acid transport system / permease component D0887_RS04240 PF02653 Branched-chain amino acid transport system / permease component D0887_RS04240 PF11862 Domain of unknown function (DUF3382) D0887_RS04245 PF00005 ABC transporter D0887_RS04245 PF12399 Branched-chain amino acid ATP-binding cassette transporter D0887_RS04250 PF00005 ABC transporter D0887_RS04255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0887_RS04255 PF03466 LysR substrate binding domain D0887_RS04260 PF01293 Phosphoenolpyruvate carboxykinase D0887_RS04270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0887_RS04270 PF03466 LysR substrate binding domain D0887_RS04275 PF07690 Major Facilitator Superfamily D0887_RS04285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0887_RS04285 PF03466 LysR substrate binding domain D0887_RS04295 PF00849 RNA pseudouridylate synthase D0887_RS04300 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) D0887_RS04325 PF00691 OmpA family D0887_RS04325 PF13488 Glycine zipper D0887_RS04335 PF13296 Putative type VI secretion system Rhs element Vgr D0887_RS04335 PF04717 Type VI secretion system, phage-baseplate injector D0887_RS04335 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) D0887_RS04370 PF03781 Sulfatase-modifying factor enzyme 1 D0887_RS04440 PF13407 Periplasmic binding protein domain D0887_RS04450 PF06071 Protein of unknown function (DUF933) D0887_RS04450 PF01926 50S ribosome-binding GTPase D0887_RS04455 PF01195 Peptidyl-tRNA hydrolase D0887_RS04460 PF10762 Protein of unknown function (DUF2583) D0887_RS04470 PF01740 STAS domain D0887_RS04470 PF00916 Sulfate permease family D0887_RS04475 PF14572 Phosphoribosyl synthetase-associated domain D0887_RS04475 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase D0887_RS04485 PF00288 GHMP kinases N terminal domain D0887_RS04485 PF08544 GHMP kinases C terminal D0887_RS04490 PF03550 Outer membrane lipoprotein LolB D0887_RS04495 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain D0887_RS04495 PF01488 Shikimate / quinate 5-dehydrogenase D0887_RS04495 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain D0887_RS04500 PF00472 RF-1 domain D0887_RS04500 PF03462 PCRF domain D0887_RS04505 PF17827 PrmC N-terminal domain D0887_RS04505 PF13847 Methyltransferase domain D0887_RS04510 PF04247 Invasion gene expression up-regulator, SirB D0887_RS04515 PF13369 Transglutaminase-like superfamily D0887_RS04520 PF00793 DAHP synthetase I family D0887_RS04525 PF01699 Sodium/calcium exchanger protein D0887_RS04530 PF06150 ChaB D0887_RS04535 PF04752 ChaC-like protein D0887_RS04545 PF02635 DsrE/DsrF-like family D0887_RS04550 PF08376 Nitrate and nitrite sensing D0887_RS04550 PF03861 ANTAR domain D0887_RS04560 PF00528 Binding-protein-dependent transport system inner membrane component D0887_RS04565 PF00005 ABC transporter D0887_RS04570 PF18267 Rubredoxin NAD+ reductase C-terminal domain D0887_RS04570 PF13806 Rieske-like [2Fe-2S] domain D0887_RS04570 PF07992 Pyridine nucleotide-disulphide oxidoreductase D0887_RS04570 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain D0887_RS04570 PF01077 Nitrite and sulphite reductase 4Fe-4S domain D0887_RS04570 PF04324 BFD-like [2Fe-2S] binding domain D0887_RS04575 PF04324 BFD-like [2Fe-2S] binding domain D0887_RS04575 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D0887_RS04575 PF01568 Molydopterin dinucleotide binding domain D0887_RS04575 PF00384 Molybdopterin oxidoreductase D0887_RS04580 PF11924 Inverse autotransporter, beta-domain D0887_RS04585 PF00072 Response regulator receiver domain D0887_RS04585 PF00196 Bacterial regulatory proteins, luxR family D0887_RS04590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0887_RS04590 PF00672 HAMP domain D0887_RS04590 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term D0887_RS04590 PF07730 Histidine kinase D0887_RS04595 PF07690 Major Facilitator Superfamily D0887_RS04600 PF14710 Respiratory nitrate reductase alpha N-terminal D0887_RS04600 PF01568 Molydopterin dinucleotide binding domain D0887_RS04600 PF00384 Molybdopterin oxidoreductase D0887_RS04605 PF14711 Respiratory nitrate reductase beta C-terminal D0887_RS04605 PF13247 4Fe-4S dicluster domain D0887_RS04610 PF02613 Nitrate reductase delta subunit D0887_RS04615 PF02665 Nitrate reductase gamma subunit D0887_RS04625 PF01037 Lrp/AsnC ligand binding domain D0887_RS04660 PF00551 Formyl transferase D0887_RS04660 PF01842 ACT domain D0887_RS04665 PF02810 SEC-C motif D0887_RS04670 PF01734 Patatin-like phospholipase D0887_RS04675 PF00072 Response regulator receiver domain D0887_RS04680 PF00483 Nucleotidyl transferase D0887_RS04685 PF00816 H-NS histone family D0887_RS04690 PF00265 Thymidine kinase D0887_RS04695 PF00465 Iron-containing alcohol dehydrogenase D0887_RS04695 PF00171 Aldehyde dehydrogenase family D0887_RS04705 PF01914 MarC family integral membrane protein D0887_RS04710 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D0887_RS04715 PF00528 Binding-protein-dependent transport system inner membrane component D0887_RS04720 PF00528 Binding-protein-dependent transport system inner membrane component D0887_RS04720 PF12911 N-terminal TM domain of oligopeptide transport permease C D0887_RS04725 PF00005 ABC transporter D0887_RS04725 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D0887_RS04730 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D0887_RS04730 PF00005 ABC transporter D0887_RS04735 PF00027 Cyclic nucleotide-binding domain D0887_RS04735 PF00520 Ion transport protein D0887_RS04740 PF04269 Protein of unknown function, DUF440 D0887_RS04745 PF13396 Phospholipase_D-nuclease N-terminal D0887_RS04745 PF13091 PLD-like domain D0887_RS04755 PF04264 YceI-like domain D0887_RS04760 PF03795 YCII-related domain D0887_RS04765 PF03544 Gram-negative bacterial TonB protein C-terminal D0887_RS04770 PF03881 Fructosamine kinase D0887_RS04775 PF11080 Endoribonuclease GhoS D0887_RS04780 PF00294 pfkB family carbohydrate kinase D0887_RS04785 PF04338 Protein of unknown function, DUF481 D0887_RS04795 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain D0887_RS04795 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) D0887_RS04795 PF02824 TGS domain D0887_RS04795 PF03129 Anticodon binding domain D0887_RS04800 PF00707 Translation initiation factor IF-3, C-terminal domain D0887_RS04800 PF05198 Translation initiation factor IF-3, N-terminal domain D0887_RS04805 PF01632 Ribosomal protein L35 D0887_RS04810 PF00453 Ribosomal protein L20 D0887_RS04820 PF01409 tRNA synthetases class II core domain (F) D0887_RS04820 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain D0887_RS04825 PF01588 Putative tRNA binding domain D0887_RS04825 PF03147 Ferredoxin-fold anticodon binding domain D0887_RS04825 PF03483 B3/4 domain D0887_RS04825 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain D0887_RS04825 PF03484 tRNA synthetase B5 domain D0887_RS04830 PF00216 Bacterial DNA-binding protein D0887_RS04840 PF01266 FAD dependent oxidoreductase D0887_RS04845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0887_RS04845 PF03466 LysR substrate binding domain D0887_RS04855 PF01032 FecCD transport family D0887_RS04860 PF03180 NLPA lipoprotein D0887_RS04865 PF00255 Glutathione peroxidase D0887_RS04870 PF00005 ABC transporter D0887_RS04875 PF00877 NlpC/P60 family D0887_RS04880 PF02696 Uncharacterized ACR, YdiU/UPF0061 family D0887_RS04885 PF10636 Hemin uptake protein hemP D0887_RS04890 PF00793 DAHP synthetase I family D0887_RS04895 PF03618 Kinase/pyrophosphorylase D0887_RS04900 PF00391 PEP-utilising enzyme, mobile domain D0887_RS04900 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain D0887_RS04900 PF02896 PEP-utilising enzyme, TIM barrel domain D0887_RS04910 PF01594 AI-2E family transporter D0887_RS04915 PF13183 4Fe-4S dicluster domain D0887_RS04915 PF02913 FAD linked oxidases, C-terminal domain D0887_RS04915 PF01565 FAD binding domain D0887_RS04920 PF03061 Thioesterase superfamily D0887_RS04925 PF04226 Transglycosylase associated protein D0887_RS04945 PF01717 Cobalamin-independent synthase, Catalytic domain D0887_RS04945 PF08267 Cobalamin-independent synthase, N-terminal domain D0887_RS04950 PF07690 Major Facilitator Superfamily D0887_RS04955 PF00005 ABC transporter D0887_RS04960 PF01032 FecCD transport family D0887_RS04970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0887_RS04970 PF03466 LysR substrate binding domain D0887_RS04980 PF00440 Bacterial regulatory proteins, tetR family D0887_RS04990 PF00873 AcrB/AcrD/AcrF family D0887_RS04995 PF01070 FMN-dependent dehydrogenase D0887_RS05000 PF00440 Bacterial regulatory proteins, tetR family D0887_RS05015 PF01521 Iron-sulphur cluster biosynthesis D0887_RS05020 PF01458 Uncharacterized protein family (UPF0051) D0887_RS05025 PF00005 ABC transporter D0887_RS05030 PF01458 Uncharacterized protein family (UPF0051) D0887_RS05035 PF00266 Aminotransferase class-V D0887_RS05040 PF02657 Fe-S metabolism associated domain D0887_RS05045 PF01476 LysM domain D0887_RS05045 PF17969 L,D-transpeptidase C-terminal domain D0887_RS05045 PF03734 L,D-transpeptidase catalytic domain D0887_RS05050 PF04728 Lipoprotein leucine-zipper D0887_RS05055 PF02887 Pyruvate kinase, alpha/beta domain D0887_RS05055 PF00224 Pyruvate kinase, barrel domain D0887_RS05065 PF10965 Protein of unknown function (DUF2767) D0887_RS05070 PF17926 Tetracyclin repressor-like, C-terminal domain D0887_RS05070 PF00440 Bacterial regulatory proteins, tetR family D0887_RS05075 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D0887_RS05075 PF01261 Xylose isomerase-like TIM barrel D0887_RS05080 PF07690 Major Facilitator Superfamily D0887_RS05085 PF08501 Shikimate dehydrogenase substrate binding domain D0887_RS05085 PF01488 Shikimate / quinate 5-dehydrogenase D0887_RS05085 PF18317 Shikimate 5'-dehydrogenase C-terminal domain D0887_RS05095 PF00005 ABC transporter D0887_RS05100 PF01032 FecCD transport family D0887_RS05105 PF01497 Periplasmic binding protein D0887_RS05110 PF01614 Bacterial transcriptional regulator D0887_RS05110 PF09339 IclR helix-turn-helix domain D0887_RS05115 PF01494 FAD binding domain D0887_RS05120 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase D0887_RS05125 PF12697 Alpha/beta hydrolase family D0887_RS05130 PF01557 Fumarylacetoacetate (FAA) hydrolase family D0887_RS05135 PF01118 Semialdehyde dehydrogenase, NAD binding domain D0887_RS05135 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation D0887_RS05140 PF07836 DmpG-like communication domain D0887_RS05140 PF00682 HMGL-like D0887_RS05145 PF07690 Major Facilitator Superfamily D0887_RS05150 PF02578 Multi-copper polyphenol oxidoreductase laccase D0887_RS05160 PF05995 Cysteine dioxygenase type I D0887_RS05165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0887_RS05165 PF03466 LysR substrate binding domain D0887_RS05170 PF00296 Luciferase-like monooxygenase D0887_RS05190 PF00528 Binding-protein-dependent transport system inner membrane component D0887_RS05195 PF00005 ABC transporter D0887_RS05200 PF07715 TonB-dependent Receptor Plug Domain D0887_RS05205 PF00005 ABC transporter D0887_RS05210 PF01032 FecCD transport family D0887_RS05215 PF01032 FecCD transport family D0887_RS05230 PF00497 Bacterial extracellular solute-binding proteins, family 3 D0887_RS05235 PF00528 Binding-protein-dependent transport system inner membrane component D0887_RS05240 PF00005 ABC transporter D0887_RS05255 PF07690 Major Facilitator Superfamily D0887_RS05270 PF01546 Peptidase family M20/M25/M40 D0887_RS05270 PF07687 Peptidase dimerisation domain D0887_RS05275 PF01568 Molydopterin dinucleotide binding domain D0887_RS05275 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D0887_RS05275 PF00384 Molybdopterin oxidoreductase D0887_RS05280 PF02615 Malate/L-lactate dehydrogenase D0887_RS05295 PF00528 Binding-protein-dependent transport system inner membrane component D0887_RS05300 PF00005 ABC transporter D0887_RS05300 PF08402 TOBE domain D0887_RS05310 PF13618 Gluconate 2-dehydrogenase subunit 3 D0887_RS05315 PF00732 GMC oxidoreductase D0887_RS05315 PF05199 GMC oxidoreductase D0887_RS05320 PF00034 Cytochrome c D0887_RS05320 PF13442 Cytochrome C oxidase, cbb3-type, subunit III D0887_RS05325 PF00005 ABC transporter D0887_RS05330 PF03379 CcmB protein D0887_RS05335 PF01578 Cytochrome C assembly protein D0887_RS05345 PF03100 CcmE D0887_RS05350 PF01578 Cytochrome C assembly protein D0887_RS05350 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal D0887_RS05355 PF08534 Redoxin D0887_RS05360 PF03918 Cytochrome C biogenesis protein D0887_RS05385 PF12852 Cupin D0887_RS05385 PF12833 Helix-turn-helix domain D0887_RS05390 PF00248 Aldo/keto reductase family D0887_RS05410 PF00106 short chain dehydrogenase D0887_RS05415 PF00205 Thiamine pyrophosphate enzyme, central domain D0887_RS05415 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D0887_RS05415 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D0887_RS05420 PF03306 Alpha-acetolactate decarboxylase D0887_RS05425 PF03466 LysR substrate binding domain D0887_RS05425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0887_RS05430 PF00106 short chain dehydrogenase D0887_RS05440 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain D0887_RS05440 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain D0887_RS05445 PF02803 Thiolase, C-terminal domain D0887_RS05445 PF00108 Thiolase, N-terminal domain D0887_RS05450 PF01144 Coenzyme A transferase D0887_RS05455 PF01144 Coenzyme A transferase D0887_RS05460 PF03466 LysR substrate binding domain D0887_RS05460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0887_RS05485 PF01565 FAD binding domain D0887_RS05485 PF02913 FAD linked oxidases, C-terminal domain D0887_RS05490 PF00528 Binding-protein-dependent transport system inner membrane component D0887_RS05495 PF00005 ABC transporter D0887_RS05505 PF02633 Creatinine amidohydrolase D0887_RS05510 PF01042 Endoribonuclease L-PSP D0887_RS05515 PF07969 Amidohydrolase family D0887_RS05520 PF00175 Oxidoreductase NAD-binding domain D0887_RS05520 PF00111 2Fe-2S iron-sulfur cluster binding domain D0887_RS05530 PF03466 LysR substrate binding domain D0887_RS05530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0887_RS05540 PF01979 Amidohydrolase family D0887_RS05570 PF01975 Survival protein SurE D0887_RS05575 PF12792 CSS motif domain associated with EAL D0887_RS05575 PF00563 EAL domain D0887_RS05585 PF00072 Response regulator receiver domain D0887_RS05585 PF00486 Transcriptional regulatory protein, C terminal D0887_RS05590 PF00672 HAMP domain D0887_RS05590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0887_RS05590 PF00512 His Kinase A (phospho-acceptor) domain D0887_RS05595 PF13533 Biotin-lipoyl like D0887_RS05600 PF00873 AcrB/AcrD/AcrF family D0887_RS05625 PF07690 Major Facilitator Superfamily D0887_RS05630 PF01261 Xylose isomerase-like TIM barrel D0887_RS05635 PF01418 Helix-turn-helix domain, rpiR family D0887_RS05635 PF01380 SIS domain D0887_RS05640 PF00294 pfkB family carbohydrate kinase D0887_RS05645 PF03466 LysR substrate binding domain D0887_RS05645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0887_RS05650 PF07690 Major Facilitator Superfamily D0887_RS05670 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D0887_RS05670 PF00005 ABC transporter D0887_RS05675 PF00005 ABC transporter D0887_RS05675 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D0887_RS05680 PF00528 Binding-protein-dependent transport system inner membrane component D0887_RS05685 PF00528 Binding-protein-dependent transport system inner membrane component D0887_RS05690 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D0887_RS05700 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D0887_RS05705 PF08220 DeoR-like helix-turn-helix domain D0887_RS05705 PF00455 DeoR C terminal sensor domain D0887_RS05715 PF00484 Carbonic anhydrase D0887_RS05735 PF00753 Metallo-beta-lactamase superfamily D0887_RS05735 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain D0887_RS05735 PF10996 Beta-Casp domain D0887_RS05745 PF03466 LysR substrate binding domain D0887_RS05745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0887_RS05780 PF03641 Possible lysine decarboxylase D0887_RS05790 PF01554 MatE D0887_RS05795 PF00677 Lumazine binding domain D0887_RS05805 PF07690 Major Facilitator Superfamily D0887_RS05810 PF03466 LysR substrate binding domain D0887_RS05810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0887_RS05815 PF00356 Bacterial regulatory proteins, lacI family D0887_RS05825 PF07690 Major Facilitator Superfamily D0887_RS05830 PF02777 Iron/manganese superoxide dismutases, C-terminal domain D0887_RS05830 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain D0887_RS05840 PF00877 NlpC/P60 family D0887_RS05845 PF00462 Glutaredoxin D0887_RS05850 PF00929 Exonuclease D0887_RS05855 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D0887_RS05860 PF00724 NADH:flavin oxidoreductase / NADH oxidase family D0887_RS05865 PF00440 Bacterial regulatory proteins, tetR family D0887_RS05865 PF16925 Tetracyclin repressor-like, C-terminal domain D0887_RS05870 PF06945 Protein of unknown function (DUF1289) D0887_RS05875 PF00248 Aldo/keto reductase family D0887_RS05880 PF00080 Copper/zinc superoxide dismutase (SODC) D0887_RS05885 PF04632 Fusaric acid resistance protein family D0887_RS05890 PF00529 HlyD membrane-fusion protein of T1SS D0887_RS05890 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D0887_RS05895 PF07869 Protein of unknown function (DUF1656) D0887_RS05900 PF01047 MarR family D0887_RS05905 PF17158 Membrane-associated sensor, integral membrane domain D0887_RS05905 PF00990 Diguanylate cyclase, GGDEF domain D0887_RS05910 PF05433 Glycine zipper 2TM domain D0887_RS05915 PF03702 Anhydro-N-acetylmuramic acid kinase D0887_RS05920 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme D0887_RS05925 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region D0887_RS05925 PF01243 Pyridoxamine 5'-phosphate oxidase D0887_RS05930 PF00579 tRNA synthetases class I (W and Y) D0887_RS05935 PF08543 Phosphomethylpyrimidine kinase D0887_RS05940 PF00043 Glutathione S-transferase, C-terminal domain D0887_RS05940 PF02798 Glutathione S-transferase, N-terminal domain D0887_RS05945 PF00854 POT family D0887_RS05955 PF10576 Iron-sulfur binding domain of endonuclease III D0887_RS05955 PF00730 HhH-GPD superfamily base excision DNA repair protein D0887_RS05955 PF00633 Helix-hairpin-helix motif D0887_RS05960 PF02508 Rnf-Nqr subunit, membrane protein D0887_RS05965 PF04205 FMN-binding domain D0887_RS05970 PF03116 NQR2, RnfD, RnfE family D0887_RS05975 PF10531 SLBB domain D0887_RS05975 PF12838 4Fe-4S dicluster domain D0887_RS05975 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit D0887_RS05975 PF13375 RnfC Barrel sandwich hybrid domain D0887_RS05980 PF04060 Putative Fe-S cluster D0887_RS05985 PF02508 Rnf-Nqr subunit, membrane protein D0887_RS05990 PF10754 Protein of unknown function (DUF2569) D0887_RS05995 PF05321 Haemolysin expression modulating protein D0887_RS06000 PF00232 Glycosyl hydrolase family 1 D0887_RS06010 PF02894 Oxidoreductase family, C-terminal alpha/beta domain D0887_RS06010 PF01408 Oxidoreductase family, NAD-binding Rossmann fold D0887_RS06015 PF00962 Adenosine/AMP deaminase D0887_RS06020 PF07690 Major Facilitator Superfamily D0887_RS06025 PF01638 HxlR-like helix-turn-helix D0887_RS06040 PF01292 Prokaryotic cytochrome b561 D0887_RS06045 PF02583 Metal-sensitive transcriptional repressor D0887_RS06050 PF00107 Zinc-binding dehydrogenase D0887_RS06050 PF08240 Alcohol dehydrogenase GroES-like domain D0887_RS06055 PF01011 PQQ enzyme repeat D0887_RS06060 PF03466 LysR substrate binding domain D0887_RS06060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0887_RS06065 PF00775 Dioxygenase D0887_RS06070 PF00775 Dioxygenase D0887_RS06070 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal D0887_RS06075 PF07063 Domain of unknown function (DUF1338) D0887_RS06080 PF00135 Carboxylesterase family D0887_RS06085 PF08240 Alcohol dehydrogenase GroES-like domain D0887_RS06085 PF00107 Zinc-binding dehydrogenase D0887_RS06090 PF04349 Periplasmic glucan biosynthesis protein, MdoG D0887_RS06095 PF13302 Acetyltransferase (GNAT) domain D0887_RS06100 PF18836 Beta solenoid repeat from YDCK D0887_RS06105 PF03595 Voltage-dependent anion channel D0887_RS06110 PF03848 Tellurite resistance protein TehB D0887_RS06115 PF11769 Protein of unknown function (DUF3313) D0887_RS06120 PF00892 EamA-like transporter family D0887_RS06125 PF12833 Helix-turn-helix domain D0887_RS06125 PF06445 GyrI-like small molecule binding domain D0887_RS06130 PF03594 Benzoate membrane transport protein D0887_RS06135 PF01381 Helix-turn-helix D0887_RS06135 PF07883 Cupin domain D0887_RS06145 PF01136 Peptidase family U32 D0887_RS06145 PF12392 Collagenase D0887_RS06165 PF02322 Cytochrome bd terminal oxidase subunit II D0887_RS06170 PF01654 Cytochrome bd terminal oxidase subunit I D0887_RS06175 PF00155 Aminotransferase class I and II D0887_RS06175 PF00392 Bacterial regulatory proteins, gntR family D0887_RS06180 PF13416 Bacterial extracellular solute-binding protein D0887_RS06185 PF08402 TOBE domain D0887_RS06185 PF00005 ABC transporter D0887_RS06190 PF00528 Binding-protein-dependent transport system inner membrane component D0887_RS06195 PF00528 Binding-protein-dependent transport system inner membrane component D0887_RS06200 PF00171 Aldehyde dehydrogenase family D0887_RS06220 PF10753 Toxin GhoT_OrtT D0887_RS06225 PF00364 Biotin-requiring enzyme D0887_RS06225 PF00561 alpha/beta hydrolase fold D0887_RS06230 PF00171 Aldehyde dehydrogenase family D0887_RS06235 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D0887_RS06240 PF10735 Protein of unknown function (DUF2526) D0887_RS06245 PF04657 Putative inner membrane exporter, YdcZ D0887_RS06250 PF00583 Acetyltransferase (GNAT) family D0887_RS06255 PF01381 Helix-turn-helix D0887_RS06255 PF08671 Anti-repressor SinI D0887_RS06260 PF16884 N-terminal domain of oxidoreductase D0887_RS06260 PF00107 Zinc-binding dehydrogenase D0887_RS06265 PF01156 Inosine-uridine preferring nucleoside hydrolase D0887_RS06275 PF04175 Protein of unknown function (DUF406) D0887_RS06280 PF01979 Amidohydrolase family D0887_RS06285 PF00593 TonB dependent receptor D0887_RS06285 PF07715 TonB-dependent Receptor Plug Domain D0887_RS06300 PF00324 Amino acid permease D0887_RS06305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0887_RS06305 PF03466 LysR substrate binding domain D0887_RS06310 PF01202 Shikimate kinase D0887_RS06315 PF00296 Luciferase-like monooxygenase D0887_RS06320 PF01546 Peptidase family M20/M25/M40 D0887_RS06320 PF07687 Peptidase dimerisation domain D0887_RS06325 PF00296 Luciferase-like monooxygenase D0887_RS06330 PF00497 Bacterial extracellular solute-binding proteins, family 3 D0887_RS06340 PF00528 Binding-protein-dependent transport system inner membrane component D0887_RS06345 PF00005 ABC transporter D0887_RS06355 PF13417 Glutathione S-transferase, N-terminal domain D0887_RS06360 PF01361 Tautomerase enzyme D0887_RS06375 PF11471 Maltoporin periplasmic N-terminal extension D0887_RS06375 PF02264 LamB porin D0887_RS06390 PF12833 Helix-turn-helix domain D0887_RS06390 PF02311 AraC-like ligand binding domain D0887_RS06395 PF01613 Flavin reductase like domain D0887_RS06400 PF00005 ABC transporter D0887_RS06400 PF17912 MalK OB fold domain D0887_RS06410 PF00528 Binding-protein-dependent transport system inner membrane component D0887_RS06415 PF00797 N-acetyltransferase D0887_RS06420 PF02665 Nitrate reductase gamma subunit D0887_RS06425 PF02613 Nitrate reductase delta subunit D0887_RS06430 PF14711 Respiratory nitrate reductase beta C-terminal D0887_RS06430 PF13247 4Fe-4S dicluster domain D0887_RS06435 PF00384 Molybdopterin oxidoreductase D0887_RS06435 PF14710 Respiratory nitrate reductase alpha N-terminal D0887_RS06435 PF01568 Molydopterin dinucleotide binding domain D0887_RS06440 PF07690 Major Facilitator Superfamily D0887_RS06450 PF07690 Major Facilitator Superfamily D0887_RS06455 PF01614 Bacterial transcriptional regulator D0887_RS06455 PF09339 IclR helix-turn-helix domain D0887_RS06460 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain D0887_RS06460 PF13378 Enolase C-terminal domain-like D0887_RS06465 PF02426 Muconolactone delta-isomerase D0887_RS06470 PF00775 Dioxygenase D0887_RS06470 PF04444 Catechol dioxygenase N terminus D0887_RS06475 PF00848 Ring hydroxylating alpha subunit (catalytic domain) D0887_RS06475 PF00355 Rieske [2Fe-2S] domain D0887_RS06480 PF00866 Ring hydroxylating beta subunit D0887_RS06485 PF00175 Oxidoreductase NAD-binding domain D0887_RS06485 PF00111 2Fe-2S iron-sulfur cluster binding domain D0887_RS06485 PF00970 Oxidoreductase FAD-binding domain D0887_RS06490 PF00106 short chain dehydrogenase D0887_RS06495 PF00892 EamA-like transporter family D0887_RS06500 PF01568 Molydopterin dinucleotide binding domain D0887_RS06500 PF00384 Molybdopterin oxidoreductase D0887_RS06500 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D0887_RS06505 PF00384 Molybdopterin oxidoreductase D0887_RS06505 PF01568 Molydopterin dinucleotide binding domain D0887_RS06505 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D0887_RS06510 PF12800 4Fe-4S binding domain D0887_RS06510 PF13247 4Fe-4S dicluster domain D0887_RS06510 PF09163 Formate dehydrogenase N, transmembrane D0887_RS06515 PF01292 Prokaryotic cytochrome b561 D0887_RS06530 PF03976 Polyphosphate kinase 2 (PPK2) D0887_RS06540 PF07690 Major Facilitator Superfamily D0887_RS06550 PF00296 Luciferase-like monooxygenase D0887_RS06555 PF00005 ABC transporter D0887_RS06555 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D0887_RS06560 PF12911 N-terminal TM domain of oligopeptide transport permease C D0887_RS06560 PF00528 Binding-protein-dependent transport system inner membrane component D0887_RS06565 PF00528 Binding-protein-dependent transport system inner membrane component D0887_RS06570 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D0887_RS06575 PF08240 Alcohol dehydrogenase GroES-like domain D0887_RS06575 PF00107 Zinc-binding dehydrogenase D0887_RS06580 PF00719 Inorganic pyrophosphatase D0887_RS06590 PF00005 ABC transporter D0887_RS06590 PF12848 ABC transporter D0887_RS06600 PF00390 Malic enzyme, N-terminal domain D0887_RS06600 PF03949 Malic enzyme, NAD binding domain D0887_RS06605 PF08136 30S ribosomal protein subunit S22 family D0887_RS06615 PF03466 LysR substrate binding domain D0887_RS06615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0887_RS06620 PF10820 Protein of unknown function (DUF2543) D0887_RS06630 PF10685 Stress-induced bacterial acidophilic repeat motif D0887_RS06650 PF05974 Domain of unknown function (DUF892) D0887_RS06660 PF00128 Alpha amylase, catalytic domain D0887_RS06660 PF16657 Maltogenic Amylase, C-terminal domain D0887_RS06665 PF00106 short chain dehydrogenase D0887_RS06670 PF04239 Protein of unknown function (DUF421) D0887_RS06680 PF04076 Bacterial OB fold (BOF) protein D0887_RS06685 PF02566 OsmC-like protein D0887_RS06705 PF16916 Dimerisation domain of Zinc Transporter D0887_RS06705 PF01545 Cation efflux family D0887_RS06710 PF01062 Bestrophin, RFP-TM, chloride channel D0887_RS06715 PF00384 Molybdopterin oxidoreductase D0887_RS06720 PF03466 LysR substrate binding domain D0887_RS06720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0887_RS06725 PF02378 Phosphotransferase system, EIIC D0887_RS06750 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit D0887_RS06755 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit D0887_RS06760 PF00083 Sugar (and other) transporter D0887_RS06770 PF02308 MgtC family D0887_RS06775 PF03969 AFG1-like ATPase D0887_RS06780 PF00141 Peroxidase D0887_RS06790 PF03717 Penicillin-binding Protein dimerisation domain D0887_RS06790 PF00905 Penicillin binding protein transpeptidase domain D0887_RS06795 PF02540 NAD synthase D0887_RS06795 PF00958 GMP synthase C terminal domain D0887_RS06795 PF00117 Glutamine amidotransferase class-I D0887_RS06800 PF00675 Insulinase (Peptidase family M16) D0887_RS06805 PF13186 Iron-sulfur cluster-binding domain D0887_RS06805 PF04055 Radical SAM superfamily D0887_RS06810 PF05402 Coenzyme PQQ synthesis protein D (PqqD) D0887_RS06815 PF03070 TENA/THI-4/PQQC family D0887_RS06820 PF12706 Beta-lactamase superfamily domain D0887_RS06825 PF08042 PqqA family D0887_RS06830 PF01244 Membrane dipeptidase (Peptidase family M19) D0887_RS06835 PF00561 alpha/beta hydrolase fold D0887_RS06840 PF00072 Response regulator receiver domain D0887_RS06840 PF00486 Transcriptional regulatory protein, C terminal D0887_RS06845 PF00512 His Kinase A (phospho-acceptor) domain D0887_RS06845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0887_RS06845 PF00672 HAMP domain D0887_RS06850 PF17991 Thioredoxin like C-terminal domain D0887_RS06850 PF02683 Cytochrome C biogenesis protein transmembrane region D0887_RS06850 PF00578 AhpC/TSA family D0887_RS06860 PF00282 Pyridoxal-dependent decarboxylase conserved domain D0887_RS06865 PF00202 Aminotransferase class-III D0887_RS06870 PF09084 NMT1/THI5 like D0887_RS06875 PF00528 Binding-protein-dependent transport system inner membrane component D0887_RS06880 PF00005 ABC transporter D0887_RS06885 PF03070 TENA/THI-4/PQQC family D0887_RS06900 PF01408 Oxidoreductase family, NAD-binding Rossmann fold D0887_RS06900 PF02894 Oxidoreductase family, C-terminal alpha/beta domain D0887_RS06910 PF00356 Bacterial regulatory proteins, lacI family D0887_RS06915 PF00990 Diguanylate cyclase, GGDEF domain D0887_RS06915 PF08448 PAS fold D0887_RS06935 PF01979 Amidohydrolase family D0887_RS06940 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin D0887_RS06950 PF01177 Asp/Glu/Hydantoin racemase D0887_RS06975 PF00561 alpha/beta hydrolase fold D0887_RS06985 PF00117 Glutamine amidotransferase class-I D0887_RS06990 PF12833 Helix-turn-helix domain D0887_RS06990 PF02311 AraC-like ligand binding domain D0887_RS07025 PF01118 Semialdehyde dehydrogenase, NAD binding domain D0887_RS07025 PF02774 Semialdehyde dehydrogenase, dimerisation domain D0887_RS07040 PF01425 Amidase D0887_RS07065 PF00528 Binding-protein-dependent transport system inner membrane component D0887_RS07070 PF00528 Binding-protein-dependent transport system inner membrane component D0887_RS07075 PF00005 ABC transporter D0887_RS07080 PF00266 Aminotransferase class-V D0887_RS07085 PF01546 Peptidase family M20/M25/M40 D0887_RS07085 PF07687 Peptidase dimerisation domain D0887_RS07090 PF03060 Nitronate monooxygenase D0887_RS07095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0887_RS07095 PF03466 LysR substrate binding domain D0887_RS07105 PF00724 NADH:flavin oxidoreductase / NADH oxidase family D0887_RS07110 PF13454 FAD-NAD(P)-binding D0887_RS07115 PF07690 Major Facilitator Superfamily D0887_RS07115 PF00083 Sugar (and other) transporter D0887_RS07130 PF00440 Bacterial regulatory proteins, tetR family D0887_RS07160 PF07690 Major Facilitator Superfamily D0887_RS07170 PF00356 Bacterial regulatory proteins, lacI family D0887_RS07175 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D0887_RS07185 PF03611 PTS system sugar-specific permease component D0887_RS07190 PF00834 Ribulose-phosphate 3 epimerase family D0887_RS07200 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit D0887_RS07205 PF02378 Phosphotransferase system, EIIC D0887_RS07205 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit D0887_RS07210 PF01810 LysE type translocator D0887_RS07215 PF01476 LysM domain D0887_RS07215 PF04972 BON domain D0887_RS07220 PF07690 Major Facilitator Superfamily D0887_RS07235 PF00512 His Kinase A (phospho-acceptor) domain D0887_RS07235 PF00672 HAMP domain D0887_RS07235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0887_RS07240 PF02954 Bacterial regulatory protein, Fis family D0887_RS07240 PF00072 Response regulator receiver domain D0887_RS07240 PF14532 Sigma-54 interaction domain D0887_RS07245 PF04229 GrpB protein D0887_RS07245 PF13673 Acetyltransferase (GNAT) domain D0887_RS07250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0887_RS07250 PF03466 LysR substrate binding domain D0887_RS07255 PF00248 Aldo/keto reductase family D0887_RS07260 PF00248 Aldo/keto reductase family D0887_RS07265 PF08450 SMP-30/Gluconolactonase/LRE-like region D0887_RS07270 PF00248 Aldo/keto reductase family D0887_RS07280 PF03466 LysR substrate binding domain D0887_RS07280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0887_RS07285 PF01546 Peptidase family M20/M25/M40 D0887_RS07285 PF07687 Peptidase dimerisation domain D0887_RS07300 PF00155 Aminotransferase class I and II D0887_RS07305 PF03222 Tryptophan/tyrosine permease family D0887_RS07310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0887_RS07310 PF03466 LysR substrate binding domain D0887_RS07320 PF02322 Cytochrome bd terminal oxidase subunit II D0887_RS07325 PF01654 Cytochrome bd terminal oxidase subunit I D0887_RS07335 PF00085 Thioredoxin D0887_RS07340 PF00107 Zinc-binding dehydrogenase D0887_RS07340 PF08240 Alcohol dehydrogenase GroES-like domain D0887_RS07355 PF02627 Carboxymuconolactone decarboxylase family D0887_RS07365 PF03466 LysR substrate binding domain D0887_RS07365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0887_RS07370 PF13193 AMP-binding enzyme C-terminal domain D0887_RS07370 PF00501 AMP-binding enzyme D0887_RS07375 PF01144 Coenzyme A transferase D0887_RS07385 PF00108 Thiolase, N-terminal domain D0887_RS07385 PF02803 Thiolase, C-terminal domain D0887_RS07390 PF07690 Major Facilitator Superfamily D0887_RS07395 PF08450 SMP-30/Gluconolactonase/LRE-like region D0887_RS07405 PF02595 Glycerate kinase family D0887_RS07410 PF05651 Putative sugar diacid recognition D0887_RS07410 PF13556 PucR C-terminal helix-turn-helix domain D0887_RS07410 PF17853 GGDEF-like domain D0887_RS07415 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D0887_RS07415 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase D0887_RS07420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0887_RS07420 PF03466 LysR substrate binding domain D0887_RS07430 PF00392 Bacterial regulatory proteins, gntR family D0887_RS07430 PF07729 FCD domain D0887_RS07435 PF02378 Phosphotransferase system, EIIC D0887_RS07435 PF00367 phosphotransferase system, EIIB D0887_RS07440 PF11975 Family 4 glycosyl hydrolase C-terminal domain D0887_RS07440 PF02056 Family 4 glycosyl hydrolase D0887_RS07450 PF00083 Sugar (and other) transporter D0887_RS07455 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D0887_RS07455 PF00381 PTS HPr component phosphorylation site D0887_RS07465 PF00756 Putative esterase D0887_RS07470 PF13188 PAS domain D0887_RS07470 PF03707 Bacterial signalling protein N terminal repeat D0887_RS07470 PF00990 Diguanylate cyclase, GGDEF domain D0887_RS07470 PF00563 EAL domain D0887_RS07485 PF00557 Metallopeptidase family M24 D0887_RS07500 PF02753 Pili assembly chaperone PapD, C-terminal domain D0887_RS07500 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain D0887_RS07505 PF13953 PapC C-terminal domain D0887_RS07505 PF00577 Outer membrane usher protein D0887_RS07505 PF13954 PapC N-terminal domain D0887_RS07520 PF02638 Glycosyl hydrolase-like 10 D0887_RS07525 PF07804 HipA-like C-terminal domain D0887_RS07525 PF13657 HipA N-terminal domain D0887_RS07530 PF01381 Helix-turn-helix D0887_RS07535 PF00576 HIUase/Transthyretin family D0887_RS07540 PF01014 Uricase D0887_RS07540 PF09349 OHCU decarboxylase D0887_RS07545 PF00860 Permease family D0887_RS07550 PF01494 FAD binding domain D0887_RS07555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0887_RS07555 PF03466 LysR substrate binding domain D0887_RS07560 PF00355 Rieske [2Fe-2S] domain D0887_RS07565 PF00111 2Fe-2S iron-sulfur cluster binding domain D0887_RS07570 PF07690 Major Facilitator Superfamily D0887_RS07575 PF12833 Helix-turn-helix domain D0887_RS07590 PF09905 DNA-binding protein VF530 D0887_RS07600 PF03180 NLPA lipoprotein D0887_RS07605 PF09383 NIL domain D0887_RS07605 PF00005 ABC transporter D0887_RS07610 PF00528 Binding-protein-dependent transport system inner membrane component D0887_RS07615 PF03060 Nitronate monooxygenase D0887_RS07620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0887_RS07620 PF03466 LysR substrate binding domain D0887_RS07625 PF06779 Uncharacterised MFS-type transporter YbfB D0887_RS07635 PF07690 Major Facilitator Superfamily D0887_RS07645 PF13649 Methyltransferase domain D0887_RS07685 PF00583 Acetyltransferase (GNAT) family D0887_RS07690 PF08125 Mannitol dehydrogenase C-terminal domain D0887_RS07690 PF01232 Mannitol dehydrogenase Rossmann domain D0887_RS07700 PF00990 Diguanylate cyclase, GGDEF domain D0887_RS07710 PF04960 Glutaminase D0887_RS07715 PF00171 Aldehyde dehydrogenase family D0887_RS07720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0887_RS07720 PF03466 LysR substrate binding domain D0887_RS07725 PF00583 Acetyltransferase (GNAT) family D0887_RS07730 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain D0887_RS07730 PF00056 lactate/malate dehydrogenase, NAD binding domain D0887_RS07735 PF08220 DeoR-like helix-turn-helix domain D0887_RS07735 PF00455 DeoR C terminal sensor domain D0887_RS07740 PF04166 Pyridoxal phosphate biosynthetic protein PdxA D0887_RS07745 PF17042 Nucleotide-binding C-terminal domain D0887_RS07745 PF07005 Sugar-binding N-terminal domain D0887_RS07750 PF00465 Iron-containing alcohol dehydrogenase D0887_RS07755 PF00701 Dihydrodipicolinate synthetase family D0887_RS07770 PF04074 YhcH/YjgK/YiaL D0887_RS07780 PF02567 Phenazine biosynthesis-like protein D0887_RS07785 PF07690 Major Facilitator Superfamily D0887_RS07790 PF01914 MarC family integral membrane protein D0887_RS07795 PF01047 MarR family D0887_RS07800 PF12833 Helix-turn-helix domain D0887_RS07805 PF13999 MarB protein D0887_RS07810 PF00892 EamA-like transporter family D0887_RS07815 PF07690 Major Facilitator Superfamily D0887_RS07825 PF00005 ABC transporter D0887_RS07830 PF00005 ABC transporter D0887_RS07830 PF12399 Branched-chain amino acid ATP-binding cassette transporter D0887_RS07835 PF02653 Branched-chain amino acid transport system / permease component D0887_RS07840 PF02653 Branched-chain amino acid transport system / permease component D0887_RS07845 PF02954 Bacterial regulatory protein, Fis family D0887_RS07845 PF13188 PAS domain D0887_RS07845 PF00158 Sigma-54 interaction domain D0887_RS07850 PF01717 Cobalamin-independent synthase, Catalytic domain D0887_RS07860 PF12833 Helix-turn-helix domain D0887_RS07860 PF01965 DJ-1/PfpI family D0887_RS07875 PF00356 Bacterial regulatory proteins, lacI family D0887_RS07880 PF00703 Glycosyl hydrolases family 2 D0887_RS07880 PF16353 Domain of unknown function(DUF4981) D0887_RS07880 PF02929 Beta galactosidase small chain D0887_RS07880 PF02837 Glycosyl hydrolases family 2, sugar binding domain D0887_RS07880 PF02836 Glycosyl hydrolases family 2, TIM barrel domain D0887_RS07885 PF01306 LacY proton/sugar symporter D0887_RS07890 PF02463 RecF/RecN/SMC N terminal domain D0887_RS07925 PF08220 DeoR-like helix-turn-helix domain D0887_RS07925 PF00455 DeoR C terminal sensor domain D0887_RS07930 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D0887_RS07930 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase D0887_RS07935 PF17042 Nucleotide-binding C-terminal domain D0887_RS07935 PF07005 Sugar-binding N-terminal domain D0887_RS07940 PF00596 Class II Aldolase and Adducin N-terminal domain D0887_RS07945 PF01261 Xylose isomerase-like TIM barrel D0887_RS07950 PF02447 GntP family permease D0887_RS07955 PF12833 Helix-turn-helix domain D0887_RS07970 PF00563 EAL domain D0887_RS07970 PF04940 Sensors of blue-light using FAD D0887_RS07975 PF02464 Competence-damaged protein D0887_RS07980 PF00011 Hsp20/alpha crystallin family D0887_RS08000 PF02586 SOS response associated peptidase (SRAP) D0887_RS08005 PF12833 Helix-turn-helix domain D0887_RS08005 PF02311 AraC-like ligand binding domain D0887_RS08015 PF01432 Peptidase family M3 D0887_RS08020 PF00106 short chain dehydrogenase D0887_RS08025 PF00392 Bacterial regulatory proteins, gntR family D0887_RS08025 PF07729 FCD domain D0887_RS08030 PF00582 Universal stress protein family D0887_RS08035 PF08125 Mannitol dehydrogenase C-terminal domain D0887_RS08035 PF01232 Mannitol dehydrogenase Rossmann domain D0887_RS08040 PF07690 Major Facilitator Superfamily D0887_RS08045 PF02694 Uncharacterised BCR, YnfA/UPF0060 family D0887_RS08050 PF06932 Protein of unknown function (DUF1283) D0887_RS08055 PF13302 Acetyltransferase (GNAT) domain D0887_RS08060 PF06788 Uncharacterised protein family (UPF0257) D0887_RS08065 PF06649 Protein of unknown function (DUF1161) D0887_RS08070 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D0887_RS08070 PF01568 Molydopterin dinucleotide binding domain D0887_RS08070 PF00384 Molybdopterin oxidoreductase D0887_RS08075 PF13247 4Fe-4S dicluster domain D0887_RS08075 PF12800 4Fe-4S binding domain D0887_RS08080 PF04976 DMSO reductase anchor subunit (DmsC) D0887_RS08085 PF02613 Nitrate reductase delta subunit D0887_RS08090 PF00654 Voltage gated chloride channel D0887_RS08100 PF00480 ROK family D0887_RS08105 PF03466 LysR substrate binding domain D0887_RS08105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0887_RS08110 PF07690 Major Facilitator Superfamily D0887_RS08115 PF02074 Carboxypeptidase Taq (M32) metallopeptidase D0887_RS08125 PF00089 Trypsin D0887_RS08135 PF00893 Small Multidrug Resistance protein D0887_RS08140 PF00893 Small Multidrug Resistance protein D0887_RS08145 PF01594 AI-2E family transporter D0887_RS08150 PF16957 Malonate decarboxylase, alpha subunit, transporter D0887_RS08155 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase D0887_RS08160 PF06857 Malonate decarboxylase delta subunit (MdcD) D0887_RS08165 PF01039 Carboxyl transferase domain D0887_RS08175 PF03547 Membrane transport protein D0887_RS08180 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG D0887_RS08185 PF00698 Acyl transferase domain D0887_RS08190 PF03466 LysR substrate binding domain D0887_RS08190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0887_RS08210 PF06039 Malate:quinone oxidoreductase (Mqo) D0887_RS08215 PF13580 SIS domain D0887_RS08225 PF17203 Single cache domain 3 D0887_RS08225 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain D0887_RS08225 PF00989 PAS fold D0887_RS08225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0887_RS08230 PF00072 Response regulator receiver domain D0887_RS08235 PF02424 ApbE family D0887_RS08240 PF14537 Cytochrome c3 D0887_RS08240 PF00890 FAD binding domain D0887_RS08250 PF00939 Sodium:sulfate symporter transmembrane region D0887_RS08255 PF05681 Fumarate hydratase (Fumerase) D0887_RS08255 PF05683 Fumarase C-terminus D0887_RS08270 PF02627 Carboxymuconolactone decarboxylase family D0887_RS08275 PF12146 Serine aminopeptidase, S33 D0887_RS08280 PF10397 Adenylosuccinate lyase C-terminus D0887_RS08280 PF00206 Lyase D0887_RS08285 PF02803 Thiolase, C-terminal domain D0887_RS08285 PF00108 Thiolase, N-terminal domain D0887_RS08290 PF01144 Coenzyme A transferase D0887_RS08295 PF01144 Coenzyme A transferase D0887_RS08300 PF01614 Bacterial transcriptional regulator D0887_RS08300 PF09339 IclR helix-turn-helix domain D0887_RS08305 PF01713 Smr domain D0887_RS08310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0887_RS08310 PF03466 LysR substrate binding domain D0887_RS08315 PF01546 Peptidase family M20/M25/M40 D0887_RS08315 PF07687 Peptidase dimerisation domain D0887_RS08320 PF01546 Peptidase family M20/M25/M40 D0887_RS08325 PF03806 AbgT putative transporter family D0887_RS08335 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain D0887_RS08335 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain D0887_RS08340 PF00027 Cyclic nucleotide-binding domain D0887_RS08340 PF00325 Bacterial regulatory proteins, crp family D0887_RS08345 PF00582 Universal stress protein family D0887_RS08350 PF15930 Domain of unknown function D0887_RS08355 PF02233 NAD(P) transhydrogenase beta subunit D0887_RS08360 PF05222 Alanine dehydrogenase/PNT, N-terminal domain D0887_RS08360 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch D0887_RS08360 PF01262 Alanine dehydrogenase/PNT, C-terminal domain D0887_RS08370 PF07338 Protein of unknown function (DUF1471) D0887_RS08380 PF13520 Amino acid permease D0887_RS08390 PF06942 GlpM protein D0887_RS08395 PF00486 Transcriptional regulatory protein, C terminal D0887_RS08395 PF00072 Response regulator receiver domain D0887_RS08405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0887_RS08405 PF00512 His Kinase A (phospho-acceptor) domain D0887_RS08405 PF00672 HAMP domain D0887_RS08410 PF05472 DNA replication terminus site-binding protein (Ter protein) D0887_RS08415 PF10415 Fumarase C C-terminus D0887_RS08415 PF00206 Lyase D0887_RS08420 PF05683 Fumarase C-terminus D0887_RS08420 PF05681 Fumarate hydratase (Fumerase) D0887_RS08425 PF01238 Phosphomannose isomerase type I D0887_RS08430 PF06097 Bacterial protein of unknown function (DUF945) D0887_RS08435 PF00356 Bacterial regulatory proteins, lacI family D0887_RS08435 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family D0887_RS08440 PF02378 Phosphotransferase system, EIIC D0887_RS08440 PF00367 phosphotransferase system, EIIB D0887_RS08445 PF00155 Aminotransferase class I and II D0887_RS08455 PF14001 YdfZ protein D0887_RS08470 PF04143 Sulphur transport D0887_RS08475 PF01206 Sulfurtransferase TusA D0887_RS08480 PF07166 Protein of unknown function (DUF1398) D0887_RS08485 PF01679 Proteolipid membrane potential modulator D0887_RS08490 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain D0887_RS08490 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain D0887_RS08495 PF00171 Aldehyde dehydrogenase family D0887_RS08500 PF02698 DUF218 domain D0887_RS08505 PF00083 Sugar (and other) transporter D0887_RS08505 PF07690 Major Facilitator Superfamily D0887_RS08510 PF00324 Amino acid permease D0887_RS08515 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family D0887_RS08520 PF04996 Succinylarginine dihydrolase D0887_RS08525 PF00171 Aldehyde dehydrogenase family D0887_RS08530 PF04958 Arginine N-succinyltransferase beta subunit D0887_RS08535 PF00202 Aminotransferase class-III D0887_RS08540 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain D0887_RS08540 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase D0887_RS08545 PF00248 Aldo/keto reductase family D0887_RS08550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0887_RS08550 PF03466 LysR substrate binding domain D0887_RS08565 PF13533 Biotin-lipoyl like D0887_RS08570 PF02321 Outer membrane efflux protein D0887_RS08575 PF01596 O-methyltransferase D0887_RS08580 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold D0887_RS08580 PF00270 DEAD/DEAH box helicase D0887_RS08580 PF11898 Domain of unknown function (DUF3418) D0887_RS08580 PF00271 Helicase conserved C-terminal domain D0887_RS08580 PF04408 Helicase associated domain (HA2) D0887_RS08585 PF02525 Flavodoxin-like fold D0887_RS08595 PF00132 Bacterial transferase hexapeptide (six repeats) D0887_RS08600 PF07848 PaaX-like protein D0887_RS08600 PF08223 PaaX-like protein C-terminal domain D0887_RS08605 PF00501 AMP-binding enzyme D0887_RS08605 PF14535 AMP-binding enzyme C-terminal domain D0887_RS08610 PF00108 Thiolase, N-terminal domain D0887_RS08610 PF02803 Thiolase, C-terminal domain D0887_RS08615 PF03061 Thioesterase superfamily D0887_RS08620 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain D0887_RS08620 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain D0887_RS08620 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain D0887_RS08625 PF00378 Enoyl-CoA hydratase/isomerase D0887_RS08630 PF00378 Enoyl-CoA hydratase/isomerase D0887_RS08635 PF00970 Oxidoreductase FAD-binding domain D0887_RS08635 PF00111 2Fe-2S iron-sulfur cluster binding domain D0887_RS08635 PF00175 Oxidoreductase NAD-binding domain D0887_RS08640 PF01883 Iron-sulfur cluster assembly protein D0887_RS08645 PF05138 Phenylacetic acid catabolic protein D0887_RS08650 PF06243 Phenylacetic acid degradation B D0887_RS08655 PF05138 Phenylacetic acid catabolic protein D0887_RS08660 PF01575 MaoC like domain D0887_RS08660 PF00171 Aldehyde dehydrogenase family D0887_RS08675 PF02728 Copper amine oxidase, N3 domain D0887_RS08675 PF02727 Copper amine oxidase, N2 domain D0887_RS08675 PF07833 Copper amine oxidase N-terminal domain D0887_RS08675 PF01179 Copper amine oxidase, enzyme domain D0887_RS08685 PF08546 Ketopantoate reductase PanE/ApbA C terminal D0887_RS08685 PF02558 Ketopantoate reductase PanE/ApbA D0887_RS08690 PF00171 Aldehyde dehydrogenase family D0887_RS08695 PF12833 Helix-turn-helix domain D0887_RS08695 PF14525 AraC-binding-like domain D0887_RS08700 PF07027 Protein of unknown function (DUF1318) D0887_RS08705 PF13617 YnbE-like lipoprotein D0887_RS08710 PF11739 Dicarboxylate transport D0887_RS08715 PF09335 SNARE associated Golgi protein D0887_RS08720 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D0887_RS08720 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D0887_RS08725 PF03724 META domain D0887_RS08730 PF03891 Domain of unknown function (DUF333) D0887_RS08740 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D0887_RS08740 PF10371 Domain of unknown function D0887_RS08740 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg D0887_RS08740 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase D0887_RS08740 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II D0887_RS08745 PF00267 Gram-negative porin D0887_RS08755 PF00582 Universal stress protein family D0887_RS08760 PF01171 PP-loop family D0887_RS08765 PF03880 DbpA RNA binding domain D0887_RS08765 PF00271 Helicase conserved C-terminal domain D0887_RS08765 PF00270 DEAD/DEAH box helicase D0887_RS08775 PF01544 CorA-like Mg2+ transporter protein D0887_RS08785 PF08220 DeoR-like helix-turn-helix domain D0887_RS08785 PF00455 DeoR C terminal sensor domain D0887_RS08790 PF01408 Oxidoreductase family, NAD-binding Rossmann fold D0887_RS08790 PF02894 Oxidoreductase family, C-terminal alpha/beta domain D0887_RS08805 PF00324 Amino acid permease D0887_RS08810 PF01037 Lrp/AsnC ligand binding domain D0887_RS08820 PF00155 Aminotransferase class I and II D0887_RS08825 PF00528 Binding-protein-dependent transport system inner membrane component D0887_RS08830 PF09383 NIL domain D0887_RS08830 PF00005 ABC transporter D0887_RS08835 PF03180 NLPA lipoprotein D0887_RS08840 PF00155 Aminotransferase class I and II D0887_RS08845 PF08240 Alcohol dehydrogenase GroES-like domain D0887_RS08845 PF00107 Zinc-binding dehydrogenase D0887_RS08850 PF00440 Bacterial regulatory proteins, tetR family D0887_RS08860 PF00753 Metallo-beta-lactamase superfamily D0887_RS08865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0887_RS08865 PF03466 LysR substrate binding domain D0887_RS08870 PF03466 LysR substrate binding domain D0887_RS08870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0887_RS08895 PF00440 Bacterial regulatory proteins, tetR family D0887_RS08995 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) D0887_RS08995 PF04717 Type VI secretion system, phage-baseplate injector D0887_RS08995 PF13296 Putative type VI secretion system Rhs element Vgr D0887_RS09000 PF07724 AAA domain (Cdc48 subfamily) D0887_RS09000 PF00004 ATPase family associated with various cellular activities (AAA) D0887_RS09000 PF10431 C-terminal, D2-small domain, of ClpB protein D0887_RS09000 PF17871 AAA lid domain D0887_RS09010 PF13488 Glycine zipper D0887_RS09010 PF00691 OmpA family D0887_RS09025 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath D0887_RS09035 PF01965 DJ-1/PfpI family D0887_RS09040 PF01966 HD domain D0887_RS09050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0887_RS09050 PF03466 LysR substrate binding domain D0887_RS09070 PF00990 Diguanylate cyclase, GGDEF domain D0887_RS09070 PF00072 Response regulator receiver domain D0887_RS09085 PF00535 Glycosyl transferase family 2 D0887_RS09085 PF07238 PilZ domain D0887_RS09085 PF03170 Bacterial cellulose synthase subunit D0887_RS09110 PF01627 Hpt domain D0887_RS09110 PF00512 His Kinase A (phospho-acceptor) domain D0887_RS09110 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) D0887_RS09110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0887_RS09110 PF00672 HAMP domain D0887_RS09110 PF00072 Response regulator receiver domain D0887_RS09115 PF02837 Glycosyl hydrolases family 2, sugar binding domain D0887_RS09115 PF02836 Glycosyl hydrolases family 2, TIM barrel domain D0887_RS09115 PF16355 Domain of unknown function (DUF4982) D0887_RS09115 PF00703 Glycosyl hydrolases family 2 D0887_RS09120 PF00248 Aldo/keto reductase family D0887_RS09125 PF07690 Major Facilitator Superfamily D0887_RS09130 PF02129 X-Pro dipeptidyl-peptidase (S15 family) D0887_RS09135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0887_RS09135 PF03466 LysR substrate binding domain D0887_RS09150 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D0887_RS09155 PF00246 Zinc carboxypeptidase D0887_RS09160 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain D0887_RS09160 PF13378 Enolase C-terminal domain-like D0887_RS09165 PF08534 Redoxin D0887_RS09170 PF05145 Transition state regulatory protein AbrB D0887_RS09175 PF00158 Sigma-54 interaction domain D0887_RS09175 PF18024 Helix-turn-helix domain D0887_RS09180 PF11975 Family 4 glycosyl hydrolase C-terminal domain D0887_RS09180 PF02056 Family 4 glycosyl hydrolase D0887_RS09185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0887_RS09185 PF03466 LysR substrate binding domain D0887_RS09190 PF05128 Domain of unknown function (DUF697) D0887_RS09195 PF04317 YcjX-like family, DUF463 D0887_RS09200 PF09584 Phage shock protein PspD (Phageshock_PspD) D0887_RS09205 PF04024 PspC domain D0887_RS09210 PF06667 Phage shock protein B D0887_RS09215 PF04012 PspA/IM30 family D0887_RS09220 PF02954 Bacterial regulatory protein, Fis family D0887_RS09220 PF00158 Sigma-54 interaction domain D0887_RS09225 PF07690 Major Facilitator Superfamily D0887_RS09230 PF07687 Peptidase dimerisation domain D0887_RS09230 PF01546 Peptidase family M20/M25/M40 D0887_RS09235 PF12833 Helix-turn-helix domain D0887_RS09245 PF13460 NAD(P)H-binding D0887_RS09250 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D0887_RS09255 PF00528 Binding-protein-dependent transport system inner membrane component D0887_RS09260 PF00528 Binding-protein-dependent transport system inner membrane component D0887_RS09260 PF12911 N-terminal TM domain of oligopeptide transport permease C D0887_RS09265 PF00005 ABC transporter D0887_RS09265 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D0887_RS09270 PF00005 ABC transporter D0887_RS09275 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin D0887_RS09280 PF05962 HutD D0887_RS09295 PF00773 RNB domain D0887_RS09295 PF00575 S1 RNA binding domain D0887_RS09295 PF08206 Ribonuclease B OB domain D0887_RS09295 PF17876 Cold shock domain D0887_RS09305 PF08220 DeoR-like helix-turn-helix domain D0887_RS09305 PF00455 DeoR C terminal sensor domain D0887_RS09310 PF05433 Glycine zipper 2TM domain D0887_RS09315 PF01253 Translation initiation factor SUI1 D0887_RS09320 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family D0887_RS09325 PF18073 Rubredoxin metal binding domain D0887_RS09330 PF06305 Lipopolysaccharide assembly protein A domain D0887_RS09335 PF01569 PAP2 superfamily D0887_RS09340 PF00925 GTP cyclohydrolase II D0887_RS09345 PF00330 Aconitase family (aconitate hydratase) D0887_RS09345 PF00694 Aconitase C-terminal domain D0887_RS09360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0887_RS09360 PF03466 LysR substrate binding domain D0887_RS09365 PF01751 Toprim domain D0887_RS09365 PF01131 DNA topoisomerase D0887_RS09365 PF08272 Topoisomerase I zinc-ribbon-like D0887_RS09365 PF01396 Topoisomerase DNA binding C4 zinc finger D0887_RS09370 PF10692 Protein of unknown function (DUF2498) D0887_RS09385 PF00106 short chain dehydrogenase D0887_RS09390 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP D0887_RS09390 PF12557 Cob(I)alamin adenosyltransferase N terminal D0887_RS09395 PF00849 RNA pseudouridylate synthase D0887_RS09395 PF01479 S4 domain D0887_RS09420 PF03466 LysR substrate binding domain D0887_RS09420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0887_RS09430 PF01300 Telomere recombination D0887_RS09435 PF02811 PHP domain D0887_RS09440 PF00425 chorismate binding enzyme D0887_RS09440 PF04715 Anthranilate synthase component I, N terminal region D0887_RS09445 PF00117 Glutamine amidotransferase class-I D0887_RS09445 PF02885 Glycosyl transferase family, helical bundle domain D0887_RS09445 PF00591 Glycosyl transferase family, a/b domain D0887_RS09450 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase D0887_RS09450 PF00218 Indole-3-glycerol phosphate synthase D0887_RS09455 PF00291 Pyridoxal-phosphate dependent enzyme D0887_RS09460 PF00290 Tryptophan synthase alpha chain D0887_RS09475 PF07715 TonB-dependent Receptor Plug Domain D0887_RS09475 PF00593 TonB dependent receptor D0887_RS09480 PF18331 PKHD-type hydroxylase C-terminal domain D0887_RS09480 PF13640 2OG-Fe(II) oxygenase superfamily D0887_RS09485 PF03922 OmpW family D0887_RS09490 PF03692 Putative zinc- or iron-chelating domain D0887_RS09500 PF04279 Intracellular septation protein A D0887_RS09505 PF07715 TonB-dependent Receptor Plug Domain D0887_RS09505 PF00593 TonB dependent receptor D0887_RS09510 PF03061 Thioesterase superfamily D0887_RS09515 PF14002 YniB-like protein D0887_RS09520 PF13419 Haloacid dehalogenase-like hydrolase D0887_RS09530 PF04307 LexA-binding, inner membrane-associated putative hydrolase D0887_RS09535 PF00375 Sodium:dicarboxylate symporter family D0887_RS09540 PF10729 Cell division activator CedA D0887_RS09545 PF00199 Catalase D0887_RS09545 PF06628 Catalase-related immune-responsive D0887_RS09545 PF18011 C-terminal domain found in long catalases D0887_RS09550 PF04794 YdjC-like protein D0887_RS09555 PF02056 Family 4 glycosyl hydrolase D0887_RS09555 PF11975 Family 4 glycosyl hydrolase C-terminal domain D0887_RS09560 PF07883 Cupin domain D0887_RS09560 PF12833 Helix-turn-helix domain D0887_RS09565 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit D0887_RS09570 PF02378 Phosphotransferase system, EIIC D0887_RS09575 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit D0887_RS09580 PF04355 SmpA / OmlA family D0887_RS09585 PF02540 NAD synthase D0887_RS09595 PF07813 LTXXQ motif family protein D0887_RS09600 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family D0887_RS09605 PF04996 Succinylarginine dihydrolase D0887_RS09610 PF00171 Aldehyde dehydrogenase family D0887_RS09615 PF04958 Arginine N-succinyltransferase beta subunit D0887_RS09620 PF00202 Aminotransferase class-III D0887_RS09625 PF03372 Endonuclease/Exonuclease/phosphatase family D0887_RS09630 PF09335 SNARE associated Golgi protein D0887_RS09635 PF09335 SNARE associated Golgi protein D0887_RS09640 PF02627 Carboxymuconolactone decarboxylase family D0887_RS09650 PF00528 Binding-protein-dependent transport system inner membrane component D0887_RS09655 PF00005 ABC transporter D0887_RS09660 PF00581 Rhodanese-like domain D0887_RS09665 PF01066 CDP-alcohol phosphatidyltransferase D0887_RS09670 PF00293 NUDIX domain D0887_RS09675 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase D0887_RS09675 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain D0887_RS09680 PF08659 KR domain D0887_RS09680 PF08240 Alcohol dehydrogenase GroES-like domain D0887_RS09680 PF00109 Beta-ketoacyl synthase, N-terminal domain D0887_RS09680 PF16197 Ketoacyl-synthetase C-terminal extension D0887_RS09680 PF00550 Phosphopantetheine attachment site D0887_RS09680 PF00698 Acyl transferase domain D0887_RS09680 PF14765 Polyketide synthase dehydratase D0887_RS09680 PF02801 Beta-ketoacyl synthase, C-terminal domain D0887_RS09685 PF01751 Toprim domain D0887_RS09685 PF01131 DNA topoisomerase D0887_RS09690 PF02769 AIR synthase related protein, C-terminal domain D0887_RS09690 PF00586 AIR synthase related protein, N-terminal domain D0887_RS09695 PF01569 PAP2 superfamily D0887_RS09705 PF00881 Nitroreductase family D0887_RS09710 PF01343 Peptidase family S49 D0887_RS09715 PF17763 Glutaminase/Asparaginase C-terminal domain D0887_RS09715 PF00710 Asparaginase, N-terminal D0887_RS09720 PF00857 Isochorismatase family D0887_RS09725 PF00704 Glycosyl hydrolases family 18 D0887_RS09725 PF00041 Fibronectin type III domain D0887_RS09730 PF01844 HNH endonuclease D0887_RS09735 PF07023 Protein of unknown function (DUF1315) D0887_RS09740 PF01641 SelR domain D0887_RS09745 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain D0887_RS09745 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain D0887_RS09750 PF01263 Aldose 1-epimerase D0887_RS09755 PF00248 Aldo/keto reductase family D0887_RS09760 PF06629 MltA-interacting protein MipA D0887_RS09765 PF08298 PrkA AAA domain D0887_RS09765 PF06798 PrkA serine protein kinase C-terminal domain D0887_RS09770 PF04285 Protein of unknown function (DUF444) D0887_RS09780 PF00255 Glutathione peroxidase D0887_RS09790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0887_RS09790 PF03466 LysR substrate binding domain D0887_RS09795 PF07690 Major Facilitator Superfamily D0887_RS09805 PF03466 LysR substrate binding domain D0887_RS09805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0887_RS09810 PF13438 Domain of unknown function (DUF4113) D0887_RS09810 PF11799 impB/mucB/samB family C-terminal domain D0887_RS09810 PF11798 IMS family HHH motif D0887_RS09810 PF00817 impB/mucB/samB family D0887_RS09815 PF00717 Peptidase S24-like D0887_RS09820 PF06183 DinI-like family D0887_RS09825 PF01075 Glycosyltransferase family 9 (heptosyltransferase) D0887_RS09830 PF04073 Aminoacyl-tRNA editing domain D0887_RS09835 PF04284 Protein of unknown function (DUF441) D0887_RS09840 PF12833 Helix-turn-helix domain D0887_RS09840 PF02311 AraC-like ligand binding domain D0887_RS09845 PF07690 Major Facilitator Superfamily D0887_RS09850 PF06418 CTP synthase N-terminus D0887_RS09850 PF00117 Glutamine amidotransferase class-I D0887_RS09855 PF04463 Protein of unknown function (DUF523) D0887_RS09860 PF04343 Protein of unknown function, DUF488 D0887_RS09865 PF03891 Domain of unknown function (DUF333) D0887_RS09870 PF00990 Diguanylate cyclase, GGDEF domain D0887_RS09870 PF13185 GAF domain D0887_RS09890 PF10749 Protein of unknown function (DUF2534) D0887_RS09895 PF01810 LysE type translocator D0887_RS09900 PF03279 Bacterial lipid A biosynthesis acyltransferase D0887_RS09910 PF00710 Asparaginase, N-terminal D0887_RS09910 PF17763 Glutaminase/Asparaginase C-terminal domain D0887_RS09915 PF01966 HD domain D0887_RS09920 PF00990 Diguanylate cyclase, GGDEF domain D0887_RS09925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0887_RS09925 PF03466 LysR substrate binding domain D0887_RS09930 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase D0887_RS09955 PF02322 Cytochrome bd terminal oxidase subunit II D0887_RS09960 PF01654 Cytochrome bd terminal oxidase subunit I D0887_RS09965 PF05067 Manganese containing catalase D0887_RS09970 PF05974 Domain of unknown function (DUF892) D0887_RS09975 PF05974 Domain of unknown function (DUF892) D0887_RS09980 PF10685 Stress-induced bacterial acidophilic repeat motif D0887_RS09985 PF08240 Alcohol dehydrogenase GroES-like domain D0887_RS09985 PF00107 Zinc-binding dehydrogenase D0887_RS09985 PF13823 Alcohol dehydrogenase GroES-associated D0887_RS09990 PF06906 Protein of unknown function (DUF1272) D0887_RS10015 PF00180 Isocitrate/isopropylmalate dehydrogenase D0887_RS10035 PF11799 impB/mucB/samB family C-terminal domain D0887_RS10035 PF00817 impB/mucB/samB family D0887_RS10035 PF13438 Domain of unknown function (DUF4113) D0887_RS10085 PF06791 Prophage tail length tape measure protein D0887_RS10125 PF00574 Clp protease D0887_RS10210 PF06147 Protein of unknown function (DUF968) D0887_RS10215 PF05866 Endodeoxyribonuclease RusA D0887_RS10220 PF02086 D12 class N6 adenine-specific DNA methyltransferase D0887_RS10315 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain D0887_RS10315 PF00589 Phage integrase family D0887_RS10320 PF00180 Isocitrate/isopropylmalate dehydrogenase D0887_RS10325 PF00849 RNA pseudouridylate synthase D0887_RS10330 PF00293 NUDIX domain D0887_RS10340 PF04356 Protein of unknown function (DUF489) D0887_RS10345 PF00206 Lyase D0887_RS10345 PF08328 Adenylosuccinate lyase C-terminal D0887_RS10360 PF00072 Response regulator receiver domain D0887_RS10360 PF00486 Transcriptional regulatory protein, C terminal D0887_RS10365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0887_RS10365 PF08918 PhoQ Sensor D0887_RS10370 PF08007 Cupin superfamily protein D0887_RS10375 PF01546 Peptidase family M20/M25/M40 D0887_RS10375 PF07687 Peptidase dimerisation domain D0887_RS10380 PF08402 TOBE domain D0887_RS10380 PF00005 ABC transporter D0887_RS10385 PF00528 Binding-protein-dependent transport system inner membrane component D0887_RS10390 PF00528 Binding-protein-dependent transport system inner membrane component D0887_RS10395 PF13416 Bacterial extracellular solute-binding protein D0887_RS10405 PF00501 AMP-binding enzyme D0887_RS10405 PF13193 AMP-binding enzyme C-terminal domain D0887_RS10410 PF00456 Transketolase, thiamine diphosphate binding domain D0887_RS10410 PF02780 Transketolase, C-terminal domain D0887_RS10410 PF02779 Transketolase, pyrimidine binding domain D0887_RS10415 PF00923 Transaldolase/Fructose-6-phosphate aldolase D0887_RS10420 PF02502 Ribose/Galactose Isomerase D0887_RS10425 PF03829 PTS system glucitol/sorbitol-specific IIA component D0887_RS10430 PF03812 2-keto-3-deoxygluconate permease D0887_RS10435 PF07005 Sugar-binding N-terminal domain D0887_RS10435 PF17042 Nucleotide-binding C-terminal domain D0887_RS10440 PF04166 Pyridoxal phosphate biosynthetic protein PdxA D0887_RS10445 PF00121 Triosephosphate isomerase D0887_RS10450 PF04198 Putative sugar-binding domain D0887_RS10460 PF02146 Sir2 family D0887_RS10465 PF00480 ROK family D0887_RS10470 PF12704 MacB-like periplasmic core domain D0887_RS10470 PF02687 FtsX-like permease family D0887_RS10475 PF00005 ABC transporter D0887_RS10480 PF12704 MacB-like periplasmic core domain D0887_RS10480 PF02687 FtsX-like permease family D0887_RS10490 PF02559 CarD-like/TRCF domain D0887_RS10490 PF00270 DEAD/DEAH box helicase D0887_RS10490 PF03461 TRCF domain D0887_RS10490 PF00271 Helicase conserved C-terminal domain D0887_RS10490 PF17757 UvrB interaction domain D0887_RS10495 PF03734 L,D-transpeptidase catalytic domain D0887_RS10495 PF17969 L,D-transpeptidase C-terminal domain D0887_RS10495 PF01476 LysM domain D0887_RS10500 PF07338 Protein of unknown function (DUF1471) D0887_RS10505 PF00440 Bacterial regulatory proteins, tetR family D0887_RS10510 PF00593 TonB dependent receptor D0887_RS10510 PF07715 TonB-dependent Receptor Plug Domain D0887_RS10515 PF05433 Glycine zipper 2TM domain D0887_RS10520 PF07992 Pyridine nucleotide-disulphide oxidoreductase D0887_RS10525 PF05728 Uncharacterised protein family (UPF0227) D0887_RS10530 PF00933 Glycosyl hydrolase family 3 N terminal domain D0887_RS10535 PF01636 Phosphotransferase enzyme family D0887_RS10540 PF13036 Peptidoglycan-synthase activator LpoB D0887_RS10545 PF07233 Protein of unknown function (DUF1425) D0887_RS10550 PF01230 HIT domain D0887_RS10555 PF02378 Phosphotransferase system, EIIC D0887_RS10555 PF00367 phosphotransferase system, EIIB D0887_RS10560 PF01026 TatD related DNase D0887_RS10565 PF09115 DNA polymerase III, delta subunit, C terminal D0887_RS10570 PF02223 Thymidylate kinase D0887_RS10575 PF02618 YceG-like family D0887_RS10580 PF01063 Amino-transferase class IV D0887_RS10585 PF00109 Beta-ketoacyl synthase, N-terminal domain D0887_RS10585 PF02801 Beta-ketoacyl synthase, C-terminal domain D0887_RS10590 PF00550 Phosphopantetheine attachment site D0887_RS10600 PF00698 Acyl transferase domain D0887_RS10605 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal D0887_RS10605 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III D0887_RS10610 PF02504 Fatty acid synthesis protein D0887_RS10615 PF01783 Ribosomal L32p protein family D0887_RS10620 PF02620 Large ribosomal RNA subunit accumulation protein YceD D0887_RS10625 PF02545 Maf-like protein D0887_RS10630 PF00849 RNA pseudouridylate synthase D0887_RS10630 PF01479 S4 domain D0887_RS10640 PF12111 Polyribonucleotide phosphorylase C terminal D0887_RS10640 PF00575 S1 RNA binding domain D0887_RS10640 PF10150 Ribonuclease E/G family D0887_RS10650 PF07690 Major Facilitator Superfamily D0887_RS10655 PF03023 Lipid II flippase MurJ D0887_RS10660 PF01408 Oxidoreductase family, NAD-binding Rossmann fold D0887_RS10665 PF04337 Protein of unknown function, DUF480 D0887_RS10670 PF13302 Acetyltransferase (GNAT) domain D0887_RS10675 PF07690 Major Facilitator Superfamily D0887_RS10680 PF07273 Protein of unknown function (DUF1439) D0887_RS10685 PF01979 Amidohydrolase family D0887_RS10690 PF06183 DinI-like family D0887_RS10700 PF13991 BssS protein family D0887_RS10705 PF01266 FAD dependent oxidoreductase D0887_RS10710 PF10968 Protein of unknown function (DUF2770) D0887_RS10715 PF12368 Rhodanase C-terminal D0887_RS10715 PF17773 UPF0176 acylphosphatase like domain D0887_RS10715 PF00581 Rhodanese-like domain D0887_RS10720 PF03279 Bacterial lipid A biosynthesis acyltransferase D0887_RS10730 PF07690 Major Facilitator Superfamily D0887_RS10735 PF13984 MsyB protein D0887_RS10740 PF07119 Protein of unknown function (DUF1375) D0887_RS10745 PF00535 Glycosyl transferase family 2 D0887_RS10750 PF04349 Periplasmic glucan biosynthesis protein, MdoG D0887_RS10760 PF01757 Acyltransferase family D0887_RS10765 PF00440 Bacterial regulatory proteins, tetR family D0887_RS10765 PF13977 BetI-type transcriptional repressor, C-terminal D0887_RS10770 PF01661 Macro domain D0887_RS10775 PF06496 Protein of unknown function (DUF1097) D0887_RS10780 PF02613 Nitrate reductase delta subunit D0887_RS10785 PF02811 PHP domain D0887_RS10790 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D0887_RS10805 PF03466 LysR substrate binding domain D0887_RS10805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0887_RS10810 PF05726 Pirin C-terminal cupin domain D0887_RS10810 PF02678 Pirin D0887_RS10815 PF00857 Isochorismatase family D0887_RS10830 PF01323 DSBA-like thioredoxin domain D0887_RS10835 PF02562 PhoH-like protein D0887_RS10840 PF04261 Dyp-type peroxidase family D0887_RS10845 PF13473 Cupredoxin-like domain D0887_RS10845 PF09375 Imelysin D0887_RS10850 PF03239 Iron permease FTR1 family D0887_RS10855 PF01773 Na+ dependent nucleoside transporter N-terminus D0887_RS10855 PF07670 Nucleoside recognition D0887_RS10855 PF07662 Na+ dependent nucleoside transporter C-terminus D0887_RS10865 PF00474 Sodium:solute symporter family D0887_RS10875 PF01619 Proline dehydrogenase D0887_RS10875 PF14850 DNA-binding domain of Proline dehydrogenase D0887_RS10875 PF18327 Proline utilization A proline dehydrogenase N-terminal domain D0887_RS10875 PF00171 Aldehyde dehydrogenase family D0887_RS10885 PF08362 YcdC-like protein, C-terminal region D0887_RS10885 PF00440 Bacterial regulatory proteins, tetR family D0887_RS10890 PF00296 Luciferase-like monooxygenase D0887_RS10895 PF00857 Isochorismatase family D0887_RS10900 PF01042 Endoribonuclease L-PSP D0887_RS10905 PF00561 alpha/beta hydrolase fold D0887_RS10910 PF00881 Nitroreductase family D0887_RS10915 PF01613 Flavin reductase like domain D0887_RS10920 PF00860 Permease family D0887_RS10930 PF10685 Stress-induced bacterial acidophilic repeat motif D0887_RS10935 PF03358 NADPH-dependent FMN reductase D0887_RS10940 PF13993 YccJ-like protein D0887_RS10945 PF00328 Histidine phosphatase superfamily (branch 2) D0887_RS10950 PF01638 HxlR-like helix-turn-helix D0887_RS10970 PF00324 Amino acid permease D0887_RS10980 PF00120 Glutamine synthetase, catalytic domain D0887_RS10985 PF07722 Peptidase C26 D0887_RS10990 PF01381 Helix-turn-helix D0887_RS10990 PF07883 Cupin domain D0887_RS10995 PF00171 Aldehyde dehydrogenase family D0887_RS11000 PF01266 FAD dependent oxidoreductase D0887_RS11005 PF03466 LysR substrate binding domain D0887_RS11005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0887_RS11010 PF00180 Isocitrate/isopropylmalate dehydrogenase D0887_RS11020 PF02028 BCCT, betaine/carnitine/choline family transporter D0887_RS11025 PF00355 Rieske [2Fe-2S] domain D0887_RS11025 PF00848 Ring hydroxylating alpha subunit (catalytic domain) D0887_RS11030 PF00171 Aldehyde dehydrogenase family D0887_RS11035 PF00111 2Fe-2S iron-sulfur cluster binding domain D0887_RS11035 PF00175 Oxidoreductase NAD-binding domain D0887_RS11035 PF00970 Oxidoreductase FAD-binding domain D0887_RS11040 PF02896 PEP-utilising enzyme, TIM barrel domain D0887_RS11040 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D0887_RS11040 PF00381 PTS HPr component phosphorylation site D0887_RS11040 PF05524 PEP-utilising enzyme, N-terminal D0887_RS11040 PF00391 PEP-utilising enzyme, mobile domain D0887_RS11050 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit D0887_RS11055 PF02901 Pyruvate formate lyase-like D0887_RS11055 PF01228 Glycine radical D0887_RS11060 PF04055 Radical SAM superfamily D0887_RS11065 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit D0887_RS11075 PF12833 Helix-turn-helix domain D0887_RS11080 PF00990 Diguanylate cyclase, GGDEF domain D0887_RS11090 PF00005 ABC transporter D0887_RS11095 PF00528 Binding-protein-dependent transport system inner membrane component D0887_RS11105 PF12792 CSS motif domain associated with EAL D0887_RS11105 PF00563 EAL domain D0887_RS11110 PF01740 STAS domain D0887_RS11115 PF00343 Carbohydrate phosphorylase D0887_RS11125 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D0887_RS11130 PF01027 Inhibitor of apoptosis-promoting Bax1 D0887_RS11135 PF04358 DsrC like protein D0887_RS11140 PF00708 Acylphosphatase D0887_RS11145 PF12833 Helix-turn-helix domain D0887_RS11150 PF01161 Phosphatidylethanolamine-binding protein D0887_RS11155 PF17785 PUA-like domain D0887_RS11155 PF10672 S-adenosylmethionine-dependent methyltransferase D0887_RS11160 PF08755 Hemimethylated DNA-binding protein YccV like D0887_RS11165 PF13380 CoA binding domain D0887_RS11170 PF02142 MGS-like domain D0887_RS11175 PF12462 DNA helicase IV / RNA helicase N terminal D0887_RS11175 PF13361 UvrD-like helicase C-terminal domain D0887_RS11175 PF00580 UvrD/REP helicase N-terminal domain D0887_RS11180 PF03733 Inner membrane component domain D0887_RS11185 PF12805 FUSC-like inner membrane protein yccS D0887_RS11190 PF04994 TfoX C-terminal domain D0887_RS11190 PF04993 TfoX N-terminal domain D0887_RS11200 PF03846 Cell division inhibitor SulA D0887_RS11205 PF01389 OmpA-like transmembrane domain D0887_RS11205 PF00691 OmpA family D0887_RS11210 PF06303 MatP N-terminal domain D0887_RS11210 PF17414 MatP C-terminal ribbon-helix-helix domain D0887_RS11215 PF05362 Lon protease (S16) C-terminal proteolytic domain D0887_RS11215 PF13654 AAA domain D0887_RS11220 PF07977 FabA-like domain D0887_RS11225 PF04957 Ribosome modulation factor D0887_RS11235 PF03886 ABC-type transport auxiliary lipoprotein component D0887_RS11240 PF02470 MlaD protein D0887_RS11245 PF04403 Paraquat-inducible protein A D0887_RS11250 PF00005 ABC transporter D0887_RS11250 PF12848 ABC transporter D0887_RS11250 PF16326 ABC transporter C-terminal domain D0887_RS11255 PF02926 THUMP domain D0887_RS11255 PF01170 Putative RNA methylase family UPF0020 D0887_RS11255 PF10672 S-adenosylmethionine-dependent methyltransferase D0887_RS11260 PF03476 MOSC N-terminal beta barrel domain D0887_RS11260 PF03473 MOSC domain D0887_RS11260 PF00111 2Fe-2S iron-sulfur cluster binding domain D0887_RS11265 PF07126 Cell-division protein ZapC D0887_RS11270 PF01180 Dihydroorotate dehydrogenase D0887_RS11275 PF03358 NADPH-dependent FMN reductase D0887_RS11280 PF09084 NMT1/THI5 like D0887_RS11285 PF00296 Luciferase-like monooxygenase D0887_RS11290 PF00528 Binding-protein-dependent transport system inner membrane component D0887_RS11295 PF00005 ABC transporter D0887_RS11300 PF17432 Domain of unknown function (DUF3458_C) ARM repeats D0887_RS11300 PF01433 Peptidase family M1 domain D0887_RS11300 PF11940 Domain of unknown function (DUF3458) Ig-like fold D0887_RS11310 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain D0887_RS11310 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family D0887_RS11315 PF01546 Peptidase family M20/M25/M40 D0887_RS11315 PF07687 Peptidase dimerisation domain D0887_RS11320 PF01546 Peptidase family M20/M25/M40 D0887_RS11320 PF07687 Peptidase dimerisation domain D0887_RS11330 PF00291 Pyridoxal-phosphate dependent enzyme D0887_RS11335 PF01037 Lrp/AsnC ligand binding domain D0887_RS11340 PF01336 OB-fold nucleic acid binding domain D0887_RS11340 PF00152 tRNA synthetases class II (D, K and N) D0887_RS11345 PF00267 Gram-negative porin D0887_RS11350 PF00155 Aminotransferase class I and II D0887_RS11355 PF00753 Metallo-beta-lactamase superfamily D0887_RS11360 PF05951 Bacterial protein of unknown function (DUF882) D0887_RS11370 PF01471 Putative peptidoglycan binding domain D0887_RS11370 PF03734 L,D-transpeptidase catalytic domain D0887_RS11375 PF04310 MukB N-terminal D0887_RS11375 PF16330 MukB hinge domain D0887_RS11380 PF04288 MukE-like family D0887_RS11385 PF17192 MukF middle domain D0887_RS11385 PF17193 MukF C-terminal domain D0887_RS11385 PF03882 MukF winged-helix domain D0887_RS11390 PF13847 Methyltransferase domain D0887_RS11395 PF02698 DUF218 domain D0887_RS11400 PF01636 Phosphotransferase enzyme family D0887_RS11405 PF02348 Cytidylyltransferase D0887_RS11410 PF03966 Trm112p-like protein D0887_RS11415 PF06224 Winged helix DNA-binding domain D0887_RS11420 PF02606 Tetraacyldisaccharide-1-P 4'-kinase D0887_RS11425 PF00005 ABC transporter D0887_RS11425 PF00664 ABC transporter transmembrane region D0887_RS11430 PF03772 Competence protein D0887_RS11430 PF00753 Metallo-beta-lactamase superfamily D0887_RS11435 PF00216 Bacterial DNA-binding protein D0887_RS11440 PF00575 S1 RNA binding domain D0887_RS11445 PF02224 Cytidylate kinase D0887_RS11450 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) D0887_RS11455 PF00266 Aminotransferase class-V D0887_RS11460 PF04239 Protein of unknown function (DUF421) D0887_RS11465 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding D0887_RS11465 PF18381 YcaO cyclodehydratase C-terminal domain D0887_RS11470 PF01226 Formate/nitrite transporter D0887_RS11475 PF01228 Glycine radical D0887_RS11475 PF02901 Pyruvate formate lyase-like D0887_RS11480 PF04606 Ogr/Delta-like zinc finger D0887_RS11520 PF00239 Resolvase, N terminal domain D0887_RS11520 PF02796 Helix-turn-helix domain of resolvase D0887_RS11525 PF07484 Phage Tail Collar Domain D0887_RS11530 PF02413 Caudovirales tail fibre assembly protein, lambda gpK D0887_RS11535 PF02413 Caudovirales tail fibre assembly protein, lambda gpK D0887_RS11660 PF05840 Bacteriophage replication gene A protein (GPA) D0887_RS11705 PF00589 Phage integrase family D0887_RS11705 PF02899 Phage integrase, N-terminal SAM-like domain D0887_RS11710 PF04055 Radical SAM superfamily D0887_RS11715 PF07690 Major Facilitator Superfamily D0887_RS11725 PF04976 DMSO reductase anchor subunit (DmsC) D0887_RS11730 PF12800 4Fe-4S binding domain D0887_RS11730 PF13247 4Fe-4S dicluster domain D0887_RS11735 PF01568 Molydopterin dinucleotide binding domain D0887_RS11735 PF00384 Molybdopterin oxidoreductase D0887_RS11735 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D0887_RS11740 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) D0887_RS11740 PF02403 Seryl-tRNA synthetase N-terminal domain D0887_RS11745 PF00004 ATPase family associated with various cellular activities (AAA) D0887_RS11745 PF12002 MgsA AAA+ ATPase C terminal D0887_RS11745 PF16193 AAA C-terminal domain D0887_RS11750 PF03548 Outer membrane lipoprotein carrier protein LolA D0887_RS11755 PF17854 FtsK alpha domain D0887_RS11755 PF13491 4TM region of DNA translocase FtsK/SpoIIIE D0887_RS11755 PF09397 Ftsk gamma domain D0887_RS11755 PF01580 FtsK/SpoIIIE family D0887_RS11760 PF01037 Lrp/AsnC ligand binding domain D0887_RS11765 PF07992 Pyridine nucleotide-disulphide oxidoreductase D0887_RS11770 PF00005 ABC transporter D0887_RS11770 PF00664 ABC transporter transmembrane region D0887_RS11775 PF00664 ABC transporter transmembrane region D0887_RS11775 PF00005 ABC transporter D0887_RS11780 PF03588 Leucyl/phenylalanyl-tRNA protein transferase D0887_RS11785 PF01176 Translation initiation factor 1A / IF-1 D0887_RS11790 PF00004 ATPase family associated with various cellular activities (AAA) D0887_RS11790 PF02861 Clp amino terminal domain, pathogenicity island component D0887_RS11790 PF07724 AAA domain (Cdc48 subfamily) D0887_RS11790 PF10431 C-terminal, D2-small domain, of ClpB protein D0887_RS11790 PF17871 AAA lid domain D0887_RS11795 PF02617 ATP-dependent Clp protease adaptor protein ClpS D0887_RS11800 PF00313 'Cold-shock' DNA-binding domain D0887_RS11810 PF12704 MacB-like periplasmic core domain D0887_RS11810 PF00005 ABC transporter D0887_RS11810 PF02687 FtsX-like permease family D0887_RS11815 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D0887_RS11820 PF11398 Protein of unknown function (DUF2813) D0887_RS11825 PF00230 Major intrinsic protein D0887_RS11830 PF03956 Lysine exporter LysO D0887_RS11835 PF03063 Prismane/CO dehydrogenase family D0887_RS11840 PF00970 Oxidoreductase FAD-binding domain D0887_RS11840 PF00111 2Fe-2S iron-sulfur cluster binding domain D0887_RS11840 PF00175 Oxidoreductase NAD-binding domain D0887_RS11850 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D0887_RS11850 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D0887_RS11850 PF00205 Thiamine pyrophosphate enzyme, central domain D0887_RS11855 PF01212 Beta-eliminating lyase D0887_RS11860 PF13460 NAD(P)H-binding D0887_RS11860 PF11066 Protein of unknown function (DUF2867) D0887_RS11865 PF01370 NAD dependent epimerase/dehydratase family D0887_RS11870 PF01510 N-acetylmuramoyl-L-alanine amidase D0887_RS11875 PF00563 EAL domain D0887_RS11875 PF01590 GAF domain D0887_RS11875 PF00990 Diguanylate cyclase, GGDEF domain D0887_RS11875 PF00360 Phytochrome region D0887_RS11885 PF12883 Protein of unknown function (DUF3828) D0887_RS11890 PF00005 ABC transporter D0887_RS11895 PF00497 Bacterial extracellular solute-binding proteins, family 3 D0887_RS11900 PF00528 Binding-protein-dependent transport system inner membrane component D0887_RS11905 PF00528 Binding-protein-dependent transport system inner membrane component D0887_RS11910 PF00497 Bacterial extracellular solute-binding proteins, family 3 D0887_RS11915 PF00672 HAMP domain D0887_RS11915 PF00989 PAS fold D0887_RS11915 PF00512 His Kinase A (phospho-acceptor) domain D0887_RS11915 PF18698 Histidine kinase sensor domain D0887_RS11915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0887_RS11920 PF00072 Response regulator receiver domain D0887_RS11920 PF00486 Transcriptional regulatory protein, C terminal D0887_RS11925 PF05958 tRNA (Uracil-5-)-methyltransferase D0887_RS11930 PF10767 Protein of unknown function (DUF2593) D0887_RS11935 PF00528 Binding-protein-dependent transport system inner membrane component D0887_RS11940 PF00528 Binding-protein-dependent transport system inner membrane component D0887_RS11945 PF08402 TOBE domain D0887_RS11945 PF00005 ABC transporter D0887_RS11955 PF10722 Putative bacterial sensory transduction regulator D0887_RS11960 PF08443 RimK-like ATP-grasp domain D0887_RS11960 PF18030 RimK PreATP-grasp domain D0887_RS11965 PF00881 Nitroreductase family D0887_RS11970 PF07214 Protein of unknown function (DUF1418) D0887_RS11975 PF00462 Glutaredoxin D0887_RS11980 PF11045 Putative inner membrane protein of Enterobacteriaceae D0887_RS11985 PF02080 TrkA-C domain D0887_RS11985 PF06826 Predicted Permease Membrane Region D0887_RS12015 PF00156 Phosphoribosyl transferase domain D0887_RS12045 PF00440 Bacterial regulatory proteins, tetR family D0887_RS12050 PF07690 Major Facilitator Superfamily D0887_RS12060 PF07690 Major Facilitator Superfamily D0887_RS12070 PF01569 PAP2 superfamily D0887_RS12075 PF00455 DeoR C terminal sensor domain D0887_RS12075 PF08220 DeoR-like helix-turn-helix domain D0887_RS12080 PF00768 D-alanyl-D-alanine carboxypeptidase D0887_RS12080 PF07943 Penicillin-binding protein 5, C-terminal domain D0887_RS12085 PF00043 Glutathione S-transferase, C-terminal domain D0887_RS12085 PF13417 Glutathione S-transferase, N-terminal domain D0887_RS12090 PF07995 Glucose / Sorbosone dehydrogenase D0887_RS12095 PF10799 Biofilm formation protein (YliH/bssR) D0887_RS12100 PF01306 LacY proton/sugar symporter D0887_RS12105 PF18693 TRAM domain D0887_RS12105 PF04055 Radical SAM superfamily D0887_RS12105 PF00919 Uncharacterized protein family UPF0004 D0887_RS12115 PF12911 N-terminal TM domain of oligopeptide transport permease C D0887_RS12115 PF00528 Binding-protein-dependent transport system inner membrane component D0887_RS12120 PF00528 Binding-protein-dependent transport system inner membrane component D0887_RS12125 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D0887_RS12130 PF00005 ABC transporter D0887_RS12130 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D0887_RS12135 PF01112 Asparaginase D0887_RS12140 PF03453 MoeA N-terminal region (domain I and II) D0887_RS12140 PF03454 MoeA C-terminal region (domain IV) D0887_RS12140 PF00994 Probable molybdopterin binding domain D0887_RS12145 PF00899 ThiF family D0887_RS12150 PF04055 Radical SAM superfamily D0887_RS12155 PF01228 Glycine radical D0887_RS12155 PF02901 Pyruvate formate lyase-like D0887_RS12165 PF07350 Protein of unknown function (DUF1479) D0887_RS12170 PF00356 Bacterial regulatory proteins, lacI family D0887_RS12175 PF07690 Major Facilitator Superfamily D0887_RS12180 PF01055 Glycosyl hydrolases family 31 D0887_RS12180 PF13802 Galactose mutarotase-like D0887_RS12180 PF17137 Domain of unknown function (DUF5110) D0887_RS12180 PF16338 Domain of unknown function (DUF4968) D0887_RS12185 PF12848 ABC transporter D0887_RS12185 PF00005 ABC transporter D0887_RS12190 PF13350 Tyrosine phosphatase family D0887_RS12195 PF17969 L,D-transpeptidase C-terminal domain D0887_RS12195 PF03734 L,D-transpeptidase catalytic domain D0887_RS12200 PF00392 Bacterial regulatory proteins, gntR family D0887_RS12200 PF07702 UTRA domain D0887_RS12205 PF00232 Glycosyl hydrolase family 1 D0887_RS12210 PF03600 Citrate transporter D0887_RS12215 PF02742 Iron dependent repressor, metal binding and dimerisation domain D0887_RS12215 PF01325 Iron dependent repressor, N-terminal DNA binding domain D0887_RS12225 PF00884 Sulfatase D0887_RS12230 PF13505 Outer membrane protein beta-barrel domain D0887_RS12235 PF00892 EamA-like transporter family D0887_RS12240 PF00210 Ferritin-like domain D0887_RS12245 PF00497 Bacterial extracellular solute-binding proteins, family 3 D0887_RS12250 PF00528 Binding-protein-dependent transport system inner membrane component D0887_RS12255 PF00005 ABC transporter D0887_RS12260 PF00924 Mechanosensitive ion channel D0887_RS12265 PF05971 RNA methyltransferase D0887_RS12270 PF01613 Flavin reductase like domain D0887_RS12280 PF01258 Prokaryotic dksA/traR C4-type zinc finger D0887_RS12285 PF07338 Protein of unknown function (DUF1471) D0887_RS12290 PF02885 Glycosyl transferase family, helical bundle domain D0887_RS12295 PF13307 Helicase C-terminal domain D0887_RS12295 PF06733 DEAD_2 D0887_RS12295 PF00270 DEAD/DEAH box helicase D0887_RS12300 PF00270 DEAD/DEAH box helicase D0887_RS12300 PF00271 Helicase conserved C-terminal domain D0887_RS12310 PF00456 Transketolase, thiamine diphosphate binding domain D0887_RS12320 PF07690 Major Facilitator Superfamily D0887_RS12325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0887_RS12325 PF03466 LysR substrate binding domain D0887_RS12330 PF00440 Bacterial regulatory proteins, tetR family D0887_RS12330 PF09209 Tetracyclin repressor-like, C-terminal domain D0887_RS12335 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D0887_RS12340 PF00005 ABC transporter D0887_RS12360 PF11076 Putative inner membrane protein YbhQ D0887_RS12365 PF03372 Endonuclease/Exonuclease/phosphatase family D0887_RS12370 PF13091 PLD-like domain D0887_RS12375 PF03706 Lysylphosphatidylglycerol synthase TM region D0887_RS12380 PF01027 Inhibitor of apoptosis-promoting Bax1 D0887_RS12385 PF02391 MoaE protein D0887_RS12390 PF02597 ThiS family D0887_RS12395 PF01967 MoaC family D0887_RS12400 PF00994 Probable molybdopterin binding domain D0887_RS12405 PF06463 Molybdenum Cofactor Synthesis C D0887_RS12405 PF04055 Radical SAM superfamily D0887_RS12415 PF01933 Uncharacterised protein family UPF0052 D0887_RS12420 PF00884 Sulfatase D0887_RS12420 PF08019 Phosphoethanolamine transferase EptA/EptB D0887_RS12425 PF00486 Transcriptional regulatory protein, C terminal D0887_RS12425 PF00072 Response regulator receiver domain D0887_RS12430 PF00512 His Kinase A (phospho-acceptor) domain D0887_RS12430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0887_RS12440 PF04851 Type III restriction enzyme, res subunit D0887_RS12440 PF00271 Helicase conserved C-terminal domain D0887_RS12440 PF17757 UvrB interaction domain D0887_RS12440 PF02151 UvrB/uvrC motif D0887_RS12440 PF12344 Ultra-violet resistance protein B D0887_RS12455 PF00005 ABC transporter D0887_RS12465 PF08241 Methyltransferase domain D0887_RS12470 PF00155 Aminotransferase class I and II D0887_RS12475 PF04055 Radical SAM superfamily D0887_RS12475 PF06968 Biotin and Thiamin Synthesis associated domain D0887_RS12485 PF00202 Aminotransferase class-III D0887_RS12490 PF01161 Phosphatidylethanolamine-binding protein D0887_RS12495 PF00324 Amino acid permease D0887_RS12500 PF00221 Aromatic amino acid lyase D0887_RS12505 PF17392 Urocanase C-terminal domain D0887_RS12505 PF17391 Urocanase N-terminal domain D0887_RS12505 PF01175 Urocanase Rossmann-like domain D0887_RS12510 PF07702 UTRA domain D0887_RS12510 PF00392 Bacterial regulatory proteins, gntR family D0887_RS12515 PF00491 Arginase family D0887_RS12520 PF01979 Amidohydrolase family D0887_RS12525 PF01095 Pectinesterase D0887_RS12530 PF00690 Cation transporter/ATPase, N-terminus D0887_RS12530 PF00689 Cation transporting ATPase, C-terminus D0887_RS12535 PF00582 Universal stress protein family D0887_RS12540 PF13533 Biotin-lipoyl like D0887_RS12545 PF00873 AcrB/AcrD/AcrF family D0887_RS12570 PF13411 MerR HTH family regulatory protein D0887_RS12575 PF04940 Sensors of blue-light using FAD D0887_RS12575 PF00563 EAL domain D0887_RS12580 PF10798 Biofilm development protein YmgB/AriR D0887_RS12590 PF10798 Biofilm development protein YmgB/AriR D0887_RS12595 PF10282 Lactonase, 7-bladed beta-propeller D0887_RS12605 PF03459 TOBE domain D0887_RS12605 PF00005 ABC transporter D0887_RS12610 PF00528 Binding-protein-dependent transport system inner membrane component D0887_RS12620 PF10766 Multidrug efflux pump-associated protein AcrZ D0887_RS12625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0887_RS12625 PF03459 TOBE domain D0887_RS12630 PF00005 ABC transporter D0887_RS12635 PF16363 GDP-mannose 4,6 dehydratase D0887_RS12640 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain D0887_RS12640 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain D0887_RS12645 PF10509 Galactokinase galactose-binding signature D0887_RS12645 PF00288 GHMP kinases N terminal domain D0887_RS12645 PF08544 GHMP kinases C terminal D0887_RS12650 PF01263 Aldose 1-epimerase D0887_RS12655 PF00300 Histidine phosphatase superfamily (branch 1) D0887_RS12660 PF00793 DAHP synthetase I family D0887_RS12665 PF13985 YbgS-like protein D0887_RS12670 PF01545 Cation efflux family D0887_RS12675 PF04973 Nicotinamide mononucleotide transporter D0887_RS12680 PF02445 Quinolinate synthetase A protein D0887_RS12725 PF13174 Tetratricopeptide repeat D0887_RS12725 PF16331 TolA binding protein trimerisation D0887_RS12730 PF00691 OmpA family D0887_RS12735 PF07676 WD40-like Beta Propeller Repeat D0887_RS12735 PF04052 TolB amino-terminal domain D0887_RS12740 PF06519 TolA C-terminal D0887_RS12745 PF02472 Biopolymer transport protein ExbD/TolR D0887_RS12750 PF01618 MotA/TolQ/ExbB proton channel family D0887_RS12755 PF03061 Thioesterase superfamily D0887_RS12760 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) D0887_RS12765 PF08173 Membrane bound YbgT-like protein D0887_RS12770 PF02322 Cytochrome bd terminal oxidase subunit II D0887_RS12775 PF01654 Cytochrome bd terminal oxidase subunit I D0887_RS12785 PF02629 CoA binding domain D0887_RS12785 PF00549 CoA-ligase D0887_RS12790 PF00549 CoA-ligase D0887_RS12790 PF08442 ATP-grasp domain D0887_RS12795 PF00364 Biotin-requiring enzyme D0887_RS12795 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) D0887_RS12795 PF02817 e3 binding domain D0887_RS12800 PF16078 2-oxoglutarate dehydrogenase N-terminus D0887_RS12800 PF00676 Dehydrogenase E1 component D0887_RS12800 PF16870 2-oxoglutarate dehydrogenase C-terminal D0887_RS12800 PF02779 Transketolase, pyrimidine binding domain D0887_RS12805 PF13085 2Fe-2S iron-sulfur cluster binding domain D0887_RS12810 PF00890 FAD binding domain D0887_RS12810 PF02910 Fumarate reductase flavoprotein C-term D0887_RS12815 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit D0887_RS12820 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit D0887_RS12835 PF00285 Citrate synthase, C-terminal domain D0887_RS12840 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain D0887_RS12840 PF06827 Zinc finger found in FPG and IleRS D0887_RS12840 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain D0887_RS12845 PF01470 Pyroglutamyl peptidase D0887_RS12860 PF03746 LamB/YcsF family D0887_RS12865 PF02626 Carboxyltransferase domain, subdomain A and B D0887_RS12870 PF02682 Carboxyltransferase domain, subdomain C and D D0887_RS12875 PF01784 NIF3 (NGG1p interacting factor 3) D0887_RS12880 PF00854 POT family D0887_RS12885 PF00875 DNA photolyase D0887_RS12885 PF03441 FAD binding domain of DNA photolyase D0887_RS12890 PF10725 Protein of unknown function (DUF2517) D0887_RS12895 PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) D0887_RS12900 PF03814 Potassium-transporting ATPase A subunit D0887_RS12910 PF02669 K+-transporting ATPase, c chain D0887_RS12915 PF13493 Domain of unknown function (DUF4118) D0887_RS12915 PF00512 His Kinase A (phospho-acceptor) domain D0887_RS12915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0887_RS12915 PF13492 GAF domain D0887_RS12915 PF02702 Osmosensitive K+ channel His kinase sensor domain D0887_RS12920 PF00486 Transcriptional regulatory protein, C terminal D0887_RS12920 PF00072 Response regulator receiver domain D0887_RS12930 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain D0887_RS12930 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II D0887_RS12930 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I D0887_RS12930 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III D0887_RS12935 PF17206 SeqA protein N-terminal domain D0887_RS12935 PF03925 SeqA protein C-terminal domain D0887_RS12940 PF12697 Alpha/beta hydrolase family D0887_RS12945 PF01402 Ribbon-helix-helix protein, copG family D0887_RS12950 PF00258 Flavodoxin D0887_RS12955 PF01475 Ferric uptake regulator family D0887_RS12965 PF13982 YbfN-like lipoprotein D0887_RS12970 PF03573 outer membrane porin, OprD family D0887_RS12980 PF00749 tRNA synthetases class I (E and Q), catalytic domain D0887_RS12980 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain D0887_RS12985 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 D0887_RS12985 PF00367 phosphotransferase system, EIIB D0887_RS12985 PF02378 Phosphotransferase system, EIIC D0887_RS12995 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase D0887_RS13000 PF01979 Amidohydrolase family D0887_RS13005 PF00480 ROK family D0887_RS13005 PF01047 MarR family D0887_RS13010 PF13344 Haloacid dehalogenase-like hydrolase D0887_RS13015 PF13537 Glutamine amidotransferase domain D0887_RS13015 PF00733 Asparagine synthase D0887_RS13060 PF01494 FAD binding domain D0887_RS13065 PF01938 TRAM domain D0887_RS13065 PF04055 Radical SAM superfamily D0887_RS13065 PF00919 Uncharacterized protein family UPF0004 D0887_RS13070 PF02562 PhoH-like protein D0887_RS13075 PF02130 Uncharacterized protein family UPF0054 D0887_RS13080 PF03471 Transporter associated domain D0887_RS13080 PF00571 CBS domain D0887_RS13085 PF00795 Carbon-nitrogen hydrolase D0887_RS13090 PF00497 Bacterial extracellular solute-binding proteins, family 3 D0887_RS13095 PF00528 Binding-protein-dependent transport system inner membrane component D0887_RS13100 PF00528 Binding-protein-dependent transport system inner membrane component D0887_RS13105 PF00005 ABC transporter D0887_RS13110 PF17287 POTRA domain D0887_RS13110 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB D0887_RS13110 PF08479 POTRA domain, ShlB-type D0887_RS13115 PF05594 Haemagluttinin repeat D0887_RS13115 PF13332 Hemagglutinin repeat D0887_RS13115 PF14436 Bacterial EndoU nuclease D0887_RS13115 PF04829 Pre-toxin domain with VENN motif D0887_RS13115 PF05860 haemagglutination activity domain D0887_RS13120 PF07295 Zinc-ribbon containing domain D0887_RS13125 PF08264 Anticodon-binding domain of tRNA D0887_RS13125 PF00133 tRNA synthetases class I (I, L, M and V) D0887_RS13125 PF13603 Leucyl-tRNA synthetase, Domain 2 D0887_RS13130 PF04390 Lipopolysaccharide-assembly D0887_RS13135 PF14840 Processivity clamp loader gamma complex DNA pol III C-term D0887_RS13135 PF06144 DNA polymerase III, delta subunit D0887_RS13140 PF01467 Cytidylyltransferase-like D0887_RS13145 PF00300 Histidine phosphatase superfamily (branch 1) D0887_RS13160 PF02590 Predicted SPOUT methyltransferase D0887_RS13165 PF03717 Penicillin-binding Protein dimerisation domain D0887_RS13165 PF00905 Penicillin binding protein transpeptidase domain D0887_RS13170 PF01098 Cell cycle protein D0887_RS13175 PF05036 Sporulation related domain D0887_RS13175 PF03330 Lytic transglycolase D0887_RS13180 PF07943 Penicillin-binding protein 5, C-terminal domain D0887_RS13180 PF00768 D-alanyl-D-alanine carboxypeptidase D0887_RS13185 PF04359 Protein of unknown function (DUF493) D0887_RS13190 PF03099 Biotin/lipoate A/B protein ligase family D0887_RS13195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0887_RS13195 PF03466 LysR substrate binding domain D0887_RS13200 PF04055 Radical SAM superfamily D0887_RS13200 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family D0887_RS13205 PF02416 mttA/Hcf106 family D0887_RS13210 PF00795 Carbon-nitrogen hydrolase D0887_RS13215 PF02537 CrcB-like protein, Camphor Resistance (CrcB) D0887_RS13220 PF00313 'Cold-shock' DNA-binding domain D0887_RS13225 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP D0887_RS13230 PF03606 C4-dicarboxylate anaerobic carrier D0887_RS13235 PF00445 Ribonuclease T2 family D0887_RS13240 PF01272 Transcription elongation factor, GreA/GreB, C-term D0887_RS13240 PF14760 Rnk N-terminus D0887_RS13245 PF00582 Universal stress protein family D0887_RS13250 PF13192 Thioredoxin domain D0887_RS13250 PF07992 Pyridine nucleotide-disulphide oxidoreductase D0887_RS13255 PF00578 AhpC/TSA family D0887_RS13255 PF10417 C-terminal domain of 1-Cys peroxiredoxin D0887_RS13260 PF13098 Thioredoxin-like domain D0887_RS13265 PF03466 LysR substrate binding domain D0887_RS13265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0887_RS13270 PF11922 Domain of unknown function (DUF3440) D0887_RS13270 PF01507 Phosphoadenosine phosphosulfate reductase family D0887_RS13275 PF02195 ParB-like nuclease domain D0887_RS13280 PF00155 Aminotransferase class I and II D0887_RS13290 PF03079 ARD/ARD' family D0887_RS13295 PF01568 Molydopterin dinucleotide binding domain D0887_RS13295 PF00384 Molybdopterin oxidoreductase D0887_RS13305 PF00005 ABC transporter D0887_RS13310 PF02653 Branched-chain amino acid transport system / permease component D0887_RS13315 PF02653 Branched-chain amino acid transport system / permease component D0887_RS13325 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D0887_RS13325 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D0887_RS13330 PF02782 FGGY family of carbohydrate kinases, C-terminal domain D0887_RS13330 PF00370 FGGY family of carbohydrate kinases, N-terminal domain D0887_RS13335 PF00596 Class II Aldolase and Adducin N-terminal domain D0887_RS13340 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin D0887_RS13350 PF07969 Amidohydrolase family D0887_RS13355 PF00356 Bacterial regulatory proteins, lacI family D0887_RS13360 PF00459 Inositol monophosphatase family D0887_RS13365 PF07690 Major Facilitator Superfamily D0887_RS13370 PF00328 Histidine phosphatase superfamily (branch 2) D0887_RS13375 PF01008 Initiation factor 2 subunit family D0887_RS13380 PF01636 Phosphotransferase enzyme family D0887_RS13395 PF02653 Branched-chain amino acid transport system / permease component D0887_RS13400 PF00005 ABC transporter D0887_RS13425 PF04328 Selenoprotein, putative D0887_RS13430 PF13722 5TM C-terminal transporter carbon starvation CstA D0887_RS13430 PF02554 Carbon starvation protein CstA D0887_RS13435 PF03061 Thioesterase superfamily D0887_RS13445 PF00550 Phosphopantetheine attachment site D0887_RS13445 PF00857 Isochorismatase family D0887_RS13450 PF00501 AMP-binding enzyme D0887_RS13450 PF13193 AMP-binding enzyme C-terminal domain D0887_RS13455 PF00425 chorismate binding enzyme D0887_RS13460 PF01497 Periplasmic binding protein D0887_RS13465 PF05977 Transmembrane secretion effector D0887_RS13470 PF01032 FecCD transport family D0887_RS13475 PF01032 FecCD transport family D0887_RS13480 PF00005 ABC transporter D0887_RS13485 PF00668 Condensation domain D0887_RS13485 PF00501 AMP-binding enzyme D0887_RS13485 PF00975 Thioesterase domain D0887_RS13485 PF13193 AMP-binding enzyme C-terminal domain D0887_RS13485 PF00550 Phosphopantetheine attachment site D0887_RS13490 PF03621 MbtH-like protein D0887_RS13495 PF11806 Domain of unknown function (DUF3327) D0887_RS13495 PF00756 Putative esterase D0887_RS13500 PF07715 TonB-dependent Receptor Plug Domain D0887_RS13500 PF00593 TonB dependent receptor D0887_RS13505 PF17837 4'-phosphopantetheinyl transferase N-terminal domain D0887_RS13505 PF01648 4'-phosphopantetheinyl transferase superfamily D0887_RS13510 PF13407 Periplasmic binding protein domain D0887_RS13520 PF00005 ABC transporter D0887_RS13525 PF02653 Branched-chain amino acid transport system / permease component D0887_RS13530 PF04754 Putative transposase, YhgA-like D0887_RS13535 PF00325 Bacterial regulatory proteins, crp family D0887_RS13535 PF04198 Putative sugar-binding domain D0887_RS13540 PF00456 Transketolase, thiamine diphosphate binding domain D0887_RS13545 PF02779 Transketolase, pyrimidine binding domain D0887_RS13545 PF02780 Transketolase, C-terminal domain D0887_RS13555 PF00370 FGGY family of carbohydrate kinases, N-terminal domain D0887_RS13555 PF02782 FGGY family of carbohydrate kinases, C-terminal domain D0887_RS13565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0887_RS13565 PF03466 LysR substrate binding domain D0887_RS13570 PF00924 Mechanosensitive ion channel D0887_RS13580 PF02028 BCCT, betaine/carnitine/choline family transporter D0887_RS13590 PF13977 BetI-type transcriptional repressor, C-terminal D0887_RS13590 PF00440 Bacterial regulatory proteins, tetR family D0887_RS13595 PF00171 Aldehyde dehydrogenase family D0887_RS13600 PF05199 GMC oxidoreductase D0887_RS13600 PF00732 GMC oxidoreductase D0887_RS13610 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D0887_RS13615 PF00528 Binding-protein-dependent transport system inner membrane component D0887_RS13620 PF00528 Binding-protein-dependent transport system inner membrane component D0887_RS13620 PF12911 N-terminal TM domain of oligopeptide transport permease C D0887_RS13625 PF00005 ABC transporter D0887_RS13625 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D0887_RS13630 PF00005 ABC transporter D0887_RS13630 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D0887_RS13635 PF00202 Aminotransferase class-III D0887_RS13640 PF00106 short chain dehydrogenase D0887_RS13645 PF00005 ABC transporter D0887_RS13650 PF00528 Binding-protein-dependent transport system inner membrane component D0887_RS13655 PF00528 Binding-protein-dependent transport system inner membrane component D0887_RS13660 PF00497 Bacterial extracellular solute-binding proteins, family 3 D0887_RS13660 PF01464 Transglycosylase SLT domain D0887_RS13665 PF00155 Aminotransferase class I and II D0887_RS13665 PF00392 Bacterial regulatory proteins, gntR family D0887_RS13670 PF00155 Aminotransferase class I and II D0887_RS13675 PF00892 EamA-like transporter family D0887_RS13680 PF07687 Peptidase dimerisation domain D0887_RS13680 PF01546 Peptidase family M20/M25/M40 D0887_RS13685 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D0887_RS13685 PF00005 ABC transporter D0887_RS13690 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D0887_RS13690 PF00005 ABC transporter D0887_RS13695 PF00528 Binding-protein-dependent transport system inner membrane component D0887_RS13695 PF12911 N-terminal TM domain of oligopeptide transport permease C D0887_RS13700 PF00528 Binding-protein-dependent transport system inner membrane component D0887_RS13705 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D0887_RS13710 PF04107 Glutamate-cysteine ligase family 2(GCS2) D0887_RS13715 PF09992 Phosphodiester glycosidase D0887_RS13720 PF00873 AcrB/AcrD/AcrF family D0887_RS13725 PF13533 Biotin-lipoyl like D0887_RS13730 PF00690 Cation transporter/ATPase, N-terminus D0887_RS13730 PF00689 Cation transporting ATPase, C-terminus D0887_RS13740 PF06643 Protein of unknown function (DUF1158) D0887_RS13745 PF12833 Helix-turn-helix domain D0887_RS13750 PF12706 Beta-lactamase superfamily domain D0887_RS13755 PF00440 Bacterial regulatory proteins, tetR family D0887_RS13760 PF04237 YjbR D0887_RS13765 PF00881 Nitroreductase family D0887_RS13795 PF07690 Major Facilitator Superfamily D0887_RS13800 PF00924 Mechanosensitive ion channel D0887_RS13805 PF00356 Bacterial regulatory proteins, lacI family D0887_RS13815 PF02894 Oxidoreductase family, C-terminal alpha/beta domain D0887_RS13815 PF01408 Oxidoreductase family, NAD-binding Rossmann fold D0887_RS13825 PF03825 Nucleoside H+ symporter D0887_RS13830 PF00324 Amino acid permease D0887_RS13835 PF00593 TonB dependent receptor D0887_RS13835 PF07715 TonB-dependent Receptor Plug Domain D0887_RS13845 PF00171 Aldehyde dehydrogenase family D0887_RS13850 PF01266 FAD dependent oxidoreductase D0887_RS13860 PF13520 Amino acid permease D0887_RS13875 PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system D0887_RS13880 PF00850 Histone deacetylase domain D0887_RS13890 PF00196 Bacterial regulatory proteins, luxR family D0887_RS13895 PF04055 Radical SAM superfamily D0887_RS13900 PF00884 Sulfatase D0887_RS13910 PF17409 MoaF C-terminal domain D0887_RS13910 PF10703 MoaF N-terminal domain D0887_RS13920 PF00248 Aldo/keto reductase family D0887_RS13925 PF00497 Bacterial extracellular solute-binding proteins, family 3 D0887_RS13930 PF01546 Peptidase family M20/M25/M40 D0887_RS13930 PF07687 Peptidase dimerisation domain D0887_RS13950 PF01032 FecCD transport family D0887_RS13955 PF00005 ABC transporter D0887_RS13960 PF00529 HlyD membrane-fusion protein of T1SS D0887_RS13960 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D0887_RS13965 PF11742 Protein of unknown function (DUF3302) D0887_RS13975 PF00294 pfkB family carbohydrate kinase D0887_RS13980 PF02264 LamB porin D0887_RS13980 PF11471 Maltoporin periplasmic N-terminal extension D0887_RS13985 PF00367 phosphotransferase system, EIIB D0887_RS13985 PF02378 Phosphotransferase system, EIIC D0887_RS13990 PF08244 Glycosyl hydrolases family 32 C terminal D0887_RS13990 PF00251 Glycosyl hydrolases family 32 N-terminal domain D0887_RS13995 PF13407 Periplasmic binding protein domain D0887_RS13995 PF00356 Bacterial regulatory proteins, lacI family D0887_RS14005 PF02653 Branched-chain amino acid transport system / permease component D0887_RS14010 PF00005 ABC transporter D0887_RS14015 PF13407 Periplasmic binding protein domain D0887_RS14020 PF00356 Bacterial regulatory proteins, lacI family D0887_RS14025 PF01408 Oxidoreductase family, NAD-binding Rossmann fold D0887_RS14025 PF02894 Oxidoreductase family, C-terminal alpha/beta domain D0887_RS14030 PF01408 Oxidoreductase family, NAD-binding Rossmann fold D0887_RS14030 PF02894 Oxidoreductase family, C-terminal alpha/beta domain D0887_RS14035 PF02894 Oxidoreductase family, C-terminal alpha/beta domain D0887_RS14035 PF01408 Oxidoreductase family, NAD-binding Rossmann fold D0887_RS14040 PF01261 Xylose isomerase-like TIM barrel D0887_RS14050 PF00152 tRNA synthetases class II (D, K and N) D0887_RS14050 PF01336 OB-fold nucleic acid binding domain D0887_RS14055 PF00854 POT family D0887_RS14060 PF01276 Orn/Lys/Arg decarboxylase, major domain D0887_RS14060 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain D0887_RS14060 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain D0887_RS14065 PF13520 Amino acid permease D0887_RS14070 PF18500 CadC C-terminal domain 1 D0887_RS14070 PF00486 Transcriptional regulatory protein, C terminal D0887_RS14080 PF03279 Bacterial lipid A biosynthesis acyltransferase D0887_RS14095 PF13954 PapC N-terminal domain D0887_RS14095 PF00577 Outer membrane usher protein D0887_RS14095 PF13953 PapC C-terminal domain D0887_RS14100 PF02753 Pili assembly chaperone PapD, C-terminal domain D0887_RS14100 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain D0887_RS14105 PF16970 Type-1 fimbrial protein, A D0887_RS14120 PF00285 Citrate synthase, C-terminal domain D0887_RS14130 PF00576 HIUase/Transthyretin family D0887_RS14155 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain D0887_RS14155 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain D0887_RS14165 PF09190 DALR domain D0887_RS14165 PF01406 tRNA synthetases class I (C) catalytic domain D0887_RS14170 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD D0887_RS14175 PF00149 Calcineurin-like phosphoesterase D0887_RS14190 PF00731 AIR carboxylase D0887_RS14195 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain D0887_RS14195 PF02222 ATP-grasp domain D0887_RS14215 PF00005 ABC transporter D0887_RS14220 PF13472 GDSL-like Lipase/Acylhydrolase family D0887_RS14225 PF00106 short chain dehydrogenase D0887_RS14230 PF00085 Thioredoxin D0887_RS14240 PF03649 Uncharacterised protein family (UPF0014) D0887_RS14245 PF00005 ABC transporter D0887_RS14250 PF16200 C-terminal region of band_7 D0887_RS14250 PF01145 SPFH domain / Band 7 family D0887_RS14255 PF01957 NfeD-like C-terminal, partner-binding D0887_RS14260 PF13411 MerR HTH family regulatory protein D0887_RS14265 PF00403 Heavy-metal-associated domain D0887_RS14270 PF01963 TraB family D0887_RS14275 PF04073 Aminoacyl-tRNA editing domain D0887_RS14280 PF00149 Calcineurin-like phosphoesterase D0887_RS14280 PF02872 5'-nucleotidase, C-terminal domain D0887_RS14285 PF07690 Major Facilitator Superfamily D0887_RS14290 PF02254 TrkA-N domain D0887_RS14290 PF00999 Sodium/hydrogen exchanger family D0887_RS14295 PF00294 pfkB family carbohydrate kinase D0887_RS14300 PF00762 Ferrochelatase D0887_RS14305 PF05191 Adenylate kinase, active site lid D0887_RS14310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0887_RS14310 PF00183 Hsp90 protein D0887_RS14315 PF13662 Toprim domain D0887_RS14315 PF02132 RecR protein D0887_RS14320 PF02575 YbaB/EbfC DNA-binding family D0887_RS14325 PF12169 DNA polymerase III subunits gamma and tau domain III D0887_RS14325 PF12170 DNA polymerase III tau subunit V interacting with alpha D0887_RS14325 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding D0887_RS14330 PF00156 Phosphoribosyl transferase domain D0887_RS14340 PF04304 Protein of unknown function (DUF454) D0887_RS14345 PF07445 Primosomal replication protein priC D0887_RS14350 PF10689 Protein of unknown function (DUF2496) D0887_RS14355 PF04754 Putative transposase, YhgA-like D0887_RS14360 PF00924 Mechanosensitive ion channel D0887_RS14360 PF12794 Mechanosensitive ion channel inner membrane domain 1 D0887_RS14360 PF12795 Mechanosensitive ion channel porin domain D0887_RS14365 PF00440 Bacterial regulatory proteins, tetR family D0887_RS14365 PF08361 MAATS-type transcriptional repressor, C-terminal region D0887_RS14370 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D0887_RS14370 PF00529 HlyD membrane-fusion protein of T1SS D0887_RS14375 PF00873 AcrB/AcrD/AcrF family D0887_RS14380 PF10757 Biofilm formation regulator YbaJ D0887_RS14385 PF05321 Haemolysin expression modulating protein D0887_RS14390 PF14602 Hexapeptide repeat of succinyl-transferase D0887_RS14390 PF12464 Maltose acetyltransferase D0887_RS14395 PF10777 Inner membrane protein YlaC D0887_RS14400 PF00392 Bacterial regulatory proteins, gntR family D0887_RS14400 PF00155 Aminotransferase class I and II D0887_RS14410 PF00444 Ribosomal protein L36 D0887_RS14415 PF01197 Ribosomal protein L31 D0887_RS14420 PF00356 Bacterial regulatory proteins, lacI family D0887_RS14425 PF02264 LamB porin D0887_RS14430 PF00367 phosphotransferase system, EIIB D0887_RS14430 PF02378 Phosphotransferase system, EIIC D0887_RS14435 PF08532 Beta-galactosidase trimerisation domain D0887_RS14435 PF08533 Beta-galactosidase C-terminal domain D0887_RS14435 PF02449 Beta-galactosidase D0887_RS14440 PF07745 Glycosyl hydrolase family 53 D0887_RS14445 PF00528 Binding-protein-dependent transport system inner membrane component D0887_RS14450 PF00528 Binding-protein-dependent transport system inner membrane component D0887_RS14455 PF13416 Bacterial extracellular solute-binding protein D0887_RS14460 PF00005 ABC transporter D0887_RS14460 PF17912 MalK OB fold domain D0887_RS14465 PF12792 CSS motif domain associated with EAL D0887_RS14465 PF00563 EAL domain D0887_RS14470 PF02583 Metal-sensitive transcriptional repressor D0887_RS14475 PF03824 High-affinity nickel-transport protein D0887_RS14510 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain D0887_RS14515 PF09619 Type III secretion system lipoprotein chaperone (YscW) D0887_RS14525 PF00909 Ammonium Transporter Family D0887_RS14530 PF00543 Nitrogen regulatory protein P-II D0887_RS14535 PF00005 ABC transporter D0887_RS14535 PF00664 ABC transporter transmembrane region D0887_RS14540 PF00005 ABC transporter D0887_RS14540 PF00664 ABC transporter transmembrane region D0887_RS14545 PF01037 Lrp/AsnC ligand binding domain D0887_RS14545 PF13404 AsnC-type helix-turn-helix domain D0887_RS14550 PF00291 Pyridoxal-phosphate dependent enzyme D0887_RS14560 PF12793 Sugar transport-related sRNA regulator N-term D0887_RS14560 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D0887_RS14565 PF06508 Queuosine biosynthesis protein QueC D0887_RS14580 PF13145 PPIC-type PPIASE domain D0887_RS14585 PF00216 Bacterial DNA-binding protein D0887_RS14590 PF02190 ATP-dependent protease La (LON) substrate-binding domain D0887_RS14590 PF05362 Lon protease (S16) C-terminal proteolytic domain D0887_RS14590 PF00004 ATPase family associated with various cellular activities (AAA) D0887_RS14595 PF10431 C-terminal, D2-small domain, of ClpB protein D0887_RS14595 PF07724 AAA domain (Cdc48 subfamily) D0887_RS14595 PF06689 ClpX C4-type zinc finger D0887_RS14600 PF00574 Clp protease D0887_RS14605 PF05698 Bacterial trigger factor protein (TF) C-terminus D0887_RS14605 PF05697 Bacterial trigger factor protein (TF) D0887_RS14605 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D0887_RS14615 PF01722 BolA-like protein D0887_RS14620 PF08139 Prokaryotic membrane lipoprotein lipid attachment site D0887_RS14620 PF03923 Uncharacterized lipoprotein D0887_RS14625 PF07690 Major Facilitator Superfamily D0887_RS14630 PF06481 COX Aromatic Rich Motif D0887_RS14630 PF00116 Cytochrome C oxidase subunit II, periplasmic domain D0887_RS14635 PF00115 Cytochrome C and Quinol oxidase polypeptide I D0887_RS14640 PF00510 Cytochrome c oxidase subunit III D0887_RS14645 PF03626 Prokaryotic Cytochrome C oxidase subunit IV D0887_RS14650 PF01040 UbiA prenyltransferase family D0887_RS14660 PF01614 Bacterial transcriptional regulator D0887_RS14660 PF09339 IclR helix-turn-helix domain D0887_RS14670 PF08501 Shikimate dehydrogenase substrate binding domain D0887_RS14670 PF01488 Shikimate / quinate 5-dehydrogenase D0887_RS14670 PF18317 Shikimate 5'-dehydrogenase C-terminal domain D0887_RS14675 PF00890 FAD binding domain D0887_RS14685 PF00890 FAD binding domain D0887_RS14695 PF07690 Major Facilitator Superfamily D0887_RS14700 PF01408 Oxidoreductase family, NAD-binding Rossmann fold D0887_RS14700 PF02894 Oxidoreductase family, C-terminal alpha/beta domain D0887_RS14705 PF07690 Major Facilitator Superfamily D0887_RS14710 PF04461 Protein of unknown function (DUF520) D0887_RS14715 PF08546 Ketopantoate reductase PanE/ApbA C terminal D0887_RS14715 PF02558 Ketopantoate reductase PanE/ApbA D0887_RS14720 PF01965 DJ-1/PfpI family D0887_RS14730 PF02568 Thiamine biosynthesis protein (ThiI) D0887_RS14730 PF02926 THUMP domain D0887_RS14735 PF02609 Exonuclease VII small subunit D0887_RS14740 PF00348 Polyprenyl synthetase D0887_RS14745 PF13292 1-deoxy-D-xylulose-5-phosphate synthase D0887_RS14745 PF02780 Transketolase, C-terminal domain D0887_RS14745 PF02779 Transketolase, pyrimidine binding domain D0887_RS14750 PF00248 Aldo/keto reductase family D0887_RS14755 PF04608 Phosphatidylglycerophosphatase A D0887_RS14760 PF00586 AIR synthase related protein, N-terminal domain D0887_RS14760 PF02769 AIR synthase related protein, C-terminal domain D0887_RS14765 PF01029 NusB family D0887_RS14770 PF00885 6,7-dimethyl-8-ribityllumazine synthase D0887_RS14775 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region D0887_RS14775 PF01872 RibD C-terminal domain D0887_RS14780 PF03477 ATP cone domain D0887_RS14785 PF11622 Protein of unknown function (DUF3251) D0887_RS14790 PF03502 Nucleoside-specific channel-forming protein, Tsx D0887_RS14805 PF07549 SecD/SecF GG Motif D0887_RS14805 PF02355 Protein export membrane protein D0887_RS14810 PF02355 Protein export membrane protein D0887_RS14810 PF13721 SecD export protein N-terminal TM region D0887_RS14810 PF07549 SecD/SecF GG Motif D0887_RS14815 PF02699 Preprotein translocase subunit D0887_RS14820 PF01702 Queuine tRNA-ribosyltransferase D0887_RS14825 PF02547 Queuosine biosynthesis protein D0887_RS14830 PF04336 Acyl carrier protein phosphodiesterase D0887_RS14835 PF00578 AhpC/TSA family D0887_RS14835 PF10417 C-terminal domain of 1-Cys peroxiredoxin D0887_RS14840 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D0887_RS14850 PF03611 PTS system sugar-specific permease component D0887_RS14855 PF00294 pfkB family carbohydrate kinase D0887_RS14860 PF01116 Fructose-bisphosphate aldolase class-II D0887_RS14865 PF01979 Amidohydrolase family D0887_RS14875 PF00857 Isochorismatase family D0887_RS14880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0887_RS14880 PF03466 LysR substrate binding domain D0887_RS14885 PF02903 Alpha amylase, N-terminal ig-like domain D0887_RS14885 PF00128 Alpha amylase, catalytic domain D0887_RS14890 PF00324 Amino acid permease D0887_RS14895 PF05525 Branched-chain amino acid transport protein D0887_RS14900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0887_RS14900 PF00512 His Kinase A (phospho-acceptor) domain D0887_RS14900 PF00989 PAS fold D0887_RS14900 PF11808 Phosphate regulon sensor protein PhoR D0887_RS14905 PF00072 Response regulator receiver domain D0887_RS14905 PF00486 Transcriptional regulatory protein, C terminal D0887_RS14910 PF00149 Calcineurin-like phosphoesterase D0887_RS14910 PF12320 Type 5 capsule protein repressor C-terminal domain D0887_RS14915 PF13476 AAA domain D0887_RS14920 PF00480 ROK family D0887_RS14925 PF04381 Putative exonuclease, RdgC D0887_RS14930 PF06865 Pyrimidine/purine nucleoside phosphorylase D0887_RS14935 PF07302 AroM protein D0887_RS14940 PF16362 YaiA protein D0887_RS14945 PF01202 Shikimate kinase D0887_RS14950 PF09849 Uncharacterized protein conserved in bacteria (DUF2076) D0887_RS14955 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 D0887_RS14960 PF03807 NADP oxidoreductase coenzyme F420-dependent D0887_RS14960 PF14748 Pyrroline-5-carboxylate reductase dimerisation D0887_RS14965 PF07769 psiF repeat D0887_RS14970 PF00245 Alkaline phosphatase D0887_RS14975 PF10796 Sigma-S stabilisation anti-adaptor protein D0887_RS14980 PF07690 Major Facilitator Superfamily D0887_RS14990 PF01820 D-ala D-ala ligase N-terminus D0887_RS14990 PF07478 D-ala D-ala ligase C-terminus D0887_RS14995 PF10953 Protein of unknown function (DUF2754) D0887_RS15000 PF10954 Protein of unknown function (DUF2755) D0887_RS15005 PF07759 Protein of unknown function (DUF1615) D0887_RS15010 PF05992 SbmA/BacA-like family D0887_RS15015 PF00857 Isochorismatase family D0887_RS15020 PF00144 Beta-lactamase D0887_RS15025 PF00490 Delta-aminolevulinic acid dehydratase D0887_RS15040 PF02668 Taurine catabolism dioxygenase TauD, TfdA family D0887_RS15045 PF00528 Binding-protein-dependent transport system inner membrane component D0887_RS15050 PF00005 ABC transporter D0887_RS15055 PF04069 Substrate binding domain of ABC-type glycine betaine transport system D0887_RS15060 PF02574 Homocysteine S-methyltransferase D0887_RS15065 PF00324 Amino acid permease D0887_RS15070 PF00324 Amino acid permease D0887_RS15075 PF06751 Ethanolamine ammonia lyase large subunit (EutB) D0887_RS15080 PF05985 Ethanolamine ammonia-lyase light chain (EutC) D0887_RS15085 PF13458 Periplasmic binding protein D0887_RS15090 PF02653 Branched-chain amino acid transport system / permease component D0887_RS15095 PF11862 Domain of unknown function (DUF3382) D0887_RS15095 PF02653 Branched-chain amino acid transport system / permease component D0887_RS15100 PF00005 ABC transporter D0887_RS15100 PF12399 Branched-chain amino acid ATP-binding cassette transporter D0887_RS15105 PF00005 ABC transporter D0887_RS15115 PF00497 Bacterial extracellular solute-binding proteins, family 3 D0887_RS15120 PF00005 ABC transporter D0887_RS15125 PF00528 Binding-protein-dependent transport system inner membrane component D0887_RS15130 PF00528 Binding-protein-dependent transport system inner membrane component D0887_RS15145 PF15976 CS1-pili formation C-terminal D0887_RS15145 PF16967 E-set like domain D0887_RS15150 PF18649 EcpB C-terminal domain D0887_RS15155 PF16449 Fimbrillin MatB D0887_RS15160 PF00196 Bacterial regulatory proteins, luxR family D0887_RS15165 PF00005 ABC transporter D0887_RS15175 PF00528 Binding-protein-dependent transport system inner membrane component D0887_RS15180 PF00528 Binding-protein-dependent transport system inner membrane component D0887_RS15210 PF00877 NlpC/P60 family D0887_RS15215 PF00267 Gram-negative porin D0887_RS15220 PF00696 Amino acid kinase family D0887_RS15220 PF01472 PUA domain D0887_RS15225 PF00171 Aldehyde dehydrogenase family D0887_RS15245 PF13954 PapC N-terminal domain D0887_RS15245 PF13953 PapC C-terminal domain D0887_RS15245 PF00577 Outer membrane usher protein D0887_RS15250 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain D0887_RS15250 PF02753 Pili assembly chaperone PapD, C-terminal domain D0887_RS15255 PF00419 Fimbrial protein D0887_RS15270 PF00486 Transcriptional regulatory protein, C terminal D0887_RS15285 PF13505 Outer membrane protein beta-barrel domain D0887_RS15300 PF00563 EAL domain D0887_RS15300 PF12792 CSS motif domain associated with EAL D0887_RS15315 PF00419 Fimbrial protein D0887_RS15320 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain D0887_RS15320 PF02753 Pili assembly chaperone PapD, C-terminal domain D0887_RS15325 PF13953 PapC C-terminal domain D0887_RS15325 PF00577 Outer membrane usher protein D0887_RS15325 PF13954 PapC N-terminal domain D0887_RS15335 PF02753 Pili assembly chaperone PapD, C-terminal domain D0887_RS15335 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain D0887_RS15345 PF13847 Methyltransferase domain D0887_RS15350 PF09857 Putative toxin of bacterial toxin-antitoxin pair D0887_RS15360 PF08943 CsiD D0887_RS15365 PF01266 FAD dependent oxidoreductase D0887_RS15370 PF00171 Aldehyde dehydrogenase family D0887_RS15400 PF00324 Amino acid permease D0887_RS15405 PF07729 FCD domain D0887_RS15405 PF00392 Bacterial regulatory proteins, gntR family D0887_RS15420 PF03466 LysR substrate binding domain D0887_RS15420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0887_RS15425 PF00248 Aldo/keto reductase family D0887_RS15430 PF00106 short chain dehydrogenase D0887_RS15445 PF07417 Sigma factor-binding transcriptional regulator Crl D0887_RS15450 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) D0887_RS15455 PF00156 Phosphoribosyl transferase domain D0887_RS15460 PF07687 Peptidase dimerisation domain D0887_RS15460 PF01546 Peptidase family M20/M25/M40 D0887_RS15465 PF13673 Acetyltransferase (GNAT) domain D0887_RS15470 PF11798 IMS family HHH motif D0887_RS15470 PF11799 impB/mucB/samB family C-terminal domain D0887_RS15470 PF00817 impB/mucB/samB family D0887_RS15475 PF03009 Glycerophosphoryl diester phosphodiesterase family D0887_RS15480 PF04400 (Na+)-NQR maturation NqrM D0887_RS15485 PF00111 2Fe-2S iron-sulfur cluster binding domain D0887_RS15485 PF00175 Oxidoreductase NAD-binding domain D0887_RS15485 PF00970 Oxidoreductase FAD-binding domain D0887_RS15490 PF02508 Rnf-Nqr subunit, membrane protein D0887_RS15495 PF02508 Rnf-Nqr subunit, membrane protein D0887_RS15500 PF04205 FMN-binding domain D0887_RS15505 PF03116 NQR2, RnfD, RnfE family D0887_RS15510 PF11973 NQRA C-terminal domain D0887_RS15510 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) D0887_RS15520 PF03734 L,D-transpeptidase catalytic domain D0887_RS15525 PF13230 Glutamine amidotransferases class-II D0887_RS15530 PF13580 SIS domain D0887_RS15535 PF09317 Domain of unknown function (DUF1974) D0887_RS15535 PF02770 Acyl-CoA dehydrogenase, middle domain D0887_RS15535 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D0887_RS15535 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D0887_RS15540 PF00795 Carbon-nitrogen hydrolase D0887_RS15545 PF01810 LysE type translocator D0887_RS15550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0887_RS15550 PF03466 LysR substrate binding domain D0887_RS15565 PF00929 Exonuclease D0887_RS15570 PF00075 RNase H D0887_RS15575 PF08241 Methyltransferase domain D0887_RS15580 PF16123 Hydroxyacylglutathione hydrolase C-terminus D0887_RS15580 PF00753 Metallo-beta-lactamase superfamily D0887_RS15585 PF01476 LysM domain D0887_RS15585 PF01464 Transglycosylase SLT domain D0887_RS15590 PF08241 Methyltransferase domain D0887_RS15595 PF03372 Endonuclease/Exonuclease/phosphatase family D0887_RS15600 PF07690 Major Facilitator Superfamily D0887_RS15605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0887_RS15605 PF03466 LysR substrate binding domain D0887_RS15610 PF00248 Aldo/keto reductase family D0887_RS15655 PF00005 ABC transporter D0887_RS15655 PF09383 NIL domain D0887_RS15660 PF00528 Binding-protein-dependent transport system inner membrane component D0887_RS15665 PF03180 NLPA lipoprotein D0887_RS15670 PF16358 RcsF lipoprotein D0887_RS15675 PF18389 TrmO C-terminal domain D0887_RS15675 PF01980 tRNA-methyltransferase O D0887_RS15680 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) D0887_RS15680 PF04073 Aminoacyl-tRNA editing domain D0887_RS15680 PF03129 Anticodon binding domain D0887_RS15685 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family D0887_RS15690 PF17185 NlpE C-terminal OB domain D0887_RS15690 PF04170 NlpE N-terminal domain D0887_RS15695 PF00472 RF-1 domain D0887_RS15700 PF07152 YaeQ protein D0887_RS15705 PF06786 Uncharacterised protein family (UPF0253) D0887_RS15710 PF07073 Modulator of Rho-dependent transcription termination (ROF) D0887_RS15715 PF01171 PP-loop family D0887_RS15715 PF11734 TilS substrate C-terminal domain D0887_RS15715 PF09179 TilS substrate binding domain D0887_RS15720 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D0887_RS15725 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain D0887_RS15725 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain D0887_RS15725 PF01276 Orn/Lys/Arg decarboxylase, major domain D0887_RS15730 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit D0887_RS15735 PF02811 PHP domain D0887_RS15735 PF01336 OB-fold nucleic acid binding domain D0887_RS15735 PF14579 Helix-hairpin-helix motif D0887_RS15735 PF17657 Bacterial DNA polymerase III alpha subunit finger domain D0887_RS15735 PF07733 Bacterial DNA polymerase III alpha NTPase domain D0887_RS15740 PF01351 Ribonuclease HII D0887_RS15745 PF02684 Lipid-A-disaccharide synthetase D0887_RS15750 PF00132 Bacterial transferase hexapeptide (six repeats) D0887_RS15750 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 D0887_RS15755 PF07977 FabA-like domain D0887_RS15760 PF00132 Bacterial transferase hexapeptide (six repeats) D0887_RS15760 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD D0887_RS15765 PF03938 Outer membrane protein (OmpH-like) D0887_RS15770 PF07244 Surface antigen variable number repeat D0887_RS15770 PF01103 Surface antigen D0887_RS15775 PF17820 PDZ domain D0887_RS15775 PF02163 Peptidase family M50 D0887_RS15785 PF01255 Putative undecaprenyl diphosphate synthase D0887_RS15795 PF13288 DXP reductoisomerase C-terminal domain D0887_RS15795 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase D0887_RS15795 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain D0887_RS15800 PF01765 Ribosome recycling factor D0887_RS15805 PF00696 Amino acid kinase family D0887_RS15810 PF00889 Elongation factor TS D0887_RS15815 PF00318 Ribosomal protein S2 D0887_RS15820 PF00557 Metallopeptidase family M24 D0887_RS15825 PF01909 Nucleotidyltransferase domain D0887_RS15825 PF08335 GlnD PII-uridylyltransferase D0887_RS15825 PF01842 ACT domain D0887_RS15825 PF01966 HD domain D0887_RS15830 PF00132 Bacterial transferase hexapeptide (six repeats) D0887_RS15830 PF14602 Hexapeptide repeat of succinyl-transferase D0887_RS15830 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal D0887_RS15835 PF11944 Protein of unknown function (DUF3461) D0887_RS15840 PF05651 Putative sugar diacid recognition D0887_RS15840 PF17853 GGDEF-like domain D0887_RS15840 PF13556 PucR C-terminal helix-turn-helix domain D0887_RS15845 PF00595 PDZ domain D0887_RS15850 PF01966 HD domain D0887_RS15850 PF13286 Phosphohydrolase-associated domain D0887_RS15855 PF01048 Phosphorylase superfamily D0887_RS15860 PF01497 Periplasmic binding protein D0887_RS15865 PF03458 UPF0126 domain D0887_RS15870 PF01521 Iron-sulphur cluster biosynthesis D0887_RS15875 PF00654 Voltage gated chloride channel D0887_RS15880 PF00202 Aminotransferase class-III D0887_RS15885 PF01032 FecCD transport family D0887_RS15890 PF01497 Periplasmic binding protein D0887_RS15895 PF00005 ABC transporter D0887_RS15900 PF07715 TonB-dependent Receptor Plug Domain D0887_RS15900 PF00593 TonB dependent receptor D0887_RS15905 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal D0887_RS15905 PF00912 Transglycosylase D0887_RS15905 PF00905 Penicillin binding protein transpeptidase domain D0887_RS15905 PF14814 Bifunctional transglycosylase second domain D0887_RS15915 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) D0887_RS15920 PF16537 Type II secretion system protein B D0887_RS15925 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) D0887_RS15925 PF18494 Pullulanase Ins domain D0887_RS15925 PF11852 Domain of unknown function (DUF3372) D0887_RS15925 PF03714 Bacterial pullanase-associated domain D0887_RS15925 PF17967 Pullulanase N2 domain D0887_RS15930 PF11356 Type II secretion system protein C D0887_RS15935 PF03958 Bacterial type II/III secretion system short domain D0887_RS15935 PF00263 Bacterial type II and III secretion system protein D0887_RS15940 PF00437 Type II/IV secretion system protein D0887_RS15945 PF00482 Type II secretion system (T2SS), protein F D0887_RS15950 PF07963 Prokaryotic N-terminal methylation motif D0887_RS15950 PF08334 Type II secretion system (T2SS), protein G D0887_RS15955 PF07963 Prokaryotic N-terminal methylation motif D0887_RS15960 PF02501 Type II secretion system (T2SS), protein I D0887_RS15960 PF07963 Prokaryotic N-terminal methylation motif D0887_RS15965 PF11612 Type II secretion system (T2SS), protein J D0887_RS15965 PF07963 Prokaryotic N-terminal methylation motif D0887_RS15970 PF03934 Type II secretion system (T2SS), protein K D0887_RS15975 PF12693 GspL periplasmic domain D0887_RS15975 PF05134 Type II secretion system (T2SS), protein L D0887_RS15980 PF04612 Type II secretion system (T2SS), protein M D0887_RS15985 PF01203 Type II secretion system (T2SS), protein N D0887_RS15990 PF06750 Bacterial Peptidase A24 N-terminal domain D0887_RS15990 PF01478 Type IV leader peptidase family D0887_RS15995 PF00270 DEAD/DEAH box helicase D0887_RS15995 PF08482 ATP-dependent helicase C-terminal D0887_RS15995 PF04408 Helicase associated domain (HA2) D0887_RS15995 PF00271 Helicase conserved C-terminal domain D0887_RS16000 PF02834 LigT like Phosphoesterase D0887_RS16005 PF03749 Sugar fermentation stimulation protein RE domain D0887_RS16005 PF17746 SfsA N-terminal OB domain D0887_RS16010 PF01258 Prokaryotic dksA/traR C4-type zinc finger D0887_RS16015 PF00749 tRNA synthetases class I (E and Q), catalytic domain D0887_RS16020 PF12626 Polymerase A arginine-rich C-terminus D0887_RS16020 PF12627 Probable RNA and SrmB- binding site of polymerase A D0887_RS16020 PF01743 Poly A polymerase head domain D0887_RS16025 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) D0887_RS16030 PF02548 Ketopantoate hydroxymethyltransferase D0887_RS16035 PF02569 Pantoate-beta-alanine ligase D0887_RS16040 PF02261 Aspartate decarboxylase D0887_RS16045 PF01522 Polysaccharide deacetylase D0887_RS16050 PF03610 PTS system fructose IIA component D0887_RS16055 PF01061 ABC-2 type transporter D0887_RS16060 PF00005 ABC transporter D0887_RS16065 PF00484 Carbonic anhydrase D0887_RS16070 PF00156 Phosphoribosyl transferase domain D0887_RS16075 PF01011 PQQ enzyme repeat D0887_RS16080 PF07732 Multicopper oxidase D0887_RS16080 PF00394 Multicopper oxidase D0887_RS16080 PF07731 Multicopper oxidase D0887_RS16085 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) D0887_RS16100 PF17284 Spermidine synthase tetramerisation domain D0887_RS16105 PF02675 S-adenosylmethionine decarboxylase D0887_RS16110 PF06062 Uncharacterised protein family (UPF0231) D0887_RS16115 PF11791 Aconitate B N-terminal domain D0887_RS16115 PF06434 Aconitate hydratase 2 N-terminus D0887_RS16115 PF00330 Aconitase family (aconitate hydratase) D0887_RS16125 PF11737 Protein of unknown function (DUF3300) D0887_RS16140 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D0887_RS16140 PF07992 Pyridine nucleotide-disulphide oxidoreductase D0887_RS16145 PF02817 e3 binding domain D0887_RS16145 PF00364 Biotin-requiring enzyme D0887_RS16145 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) D0887_RS16150 PF00456 Transketolase, thiamine diphosphate binding domain D0887_RS16150 PF17831 Pyruvate dehydrogenase E1 component middle domain D0887_RS16155 PF00392 Bacterial regulatory proteins, gntR family D0887_RS16155 PF07729 FCD domain D0887_RS16165 PF00324 Amino acid permease D0887_RS16175 PF04616 Glycosyl hydrolases family 43 D0887_RS16175 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain D0887_RS16180 PF17113 Regulatory signalling modulator protein AmpE D0887_RS16185 PF01510 N-acetylmuramoyl-L-alanine amidase D0887_RS16190 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain D0887_RS16190 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain D0887_RS16195 PF07963 Prokaryotic N-terminal methylation motif D0887_RS16200 PF00437 Type II/IV secretion system protein D0887_RS16200 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain D0887_RS16205 PF00482 Type II secretion system (T2SS), protein F D0887_RS16210 PF00478 IMP dehydrogenase / GMP reductase domain D0887_RS16215 PF01121 Dephospho-CoA kinase D0887_RS16220 PF07072 Cell division protein D0887_RS16225 PF03884 DNA gyrase inhibitor YacG D0887_RS16230 PF00293 NUDIX domain D0887_RS16235 PF07516 SecA Wing and Scaffold domain D0887_RS16235 PF02810 SEC-C motif D0887_RS16235 PF01043 SecA preprotein cross-linking domain D0887_RS16235 PF07517 SecA DEAD-like domain D0887_RS16240 PF06558 Secretion monitor precursor protein (SecM) D0887_RS16245 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase D0887_RS16250 PF12327 FtsZ family, C-terminal domain D0887_RS16250 PF00091 Tubulin/FtsZ family, GTPase domain D0887_RS16255 PF02491 SHS2 domain inserted in FTSA D0887_RS16260 PF08478 POTRA domain, FtsQ-type D0887_RS16260 PF03799 Cell division protein FtsQ D0887_RS16265 PF07478 D-ala D-ala ligase C-terminus D0887_RS16265 PF01820 D-ala D-ala ligase N-terminus D0887_RS16270 PF02875 Mur ligase family, glutamate ligase domain D0887_RS16270 PF08245 Mur ligase middle domain D0887_RS16270 PF01225 Mur ligase family, catalytic domain D0887_RS16275 PF03033 Glycosyltransferase family 28 N-terminal domain D0887_RS16275 PF04101 Glycosyltransferase family 28 C-terminal domain D0887_RS16280 PF01098 Cell cycle protein D0887_RS16285 PF08245 Mur ligase middle domain D0887_RS16285 PF02875 Mur ligase family, glutamate ligase domain D0887_RS16290 PF00953 Glycosyl transferase family 4 D0887_RS16290 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 D0887_RS16295 PF08245 Mur ligase middle domain D0887_RS16295 PF01225 Mur ligase family, catalytic domain D0887_RS16295 PF02875 Mur ligase family, glutamate ligase domain D0887_RS16300 PF08245 Mur ligase middle domain D0887_RS16300 PF02875 Mur ligase family, glutamate ligase domain D0887_RS16300 PF01225 Mur ligase family, catalytic domain D0887_RS16305 PF00905 Penicillin binding protein transpeptidase domain D0887_RS16305 PF03717 Penicillin-binding Protein dimerisation domain D0887_RS16310 PF04999 Cell division protein FtsL D0887_RS16315 PF01795 MraW methylase family D0887_RS16320 PF02381 MraZ protein, putative antitoxin-like D0887_RS16330 PF00356 Bacterial regulatory proteins, lacI family D0887_RS16330 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family D0887_RS16335 PF10369 Small subunit of acetolactate synthase D0887_RS16340 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D0887_RS16340 PF00205 Thiamine pyrophosphate enzyme, central domain D0887_RS16340 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D0887_RS16350 PF03466 LysR substrate binding domain D0887_RS16350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0887_RS16360 PF00682 HMGL-like D0887_RS16360 PF08502 LeuA allosteric (dimerisation) domain D0887_RS16365 PF00180 Isocitrate/isopropylmalate dehydrogenase D0887_RS16370 PF00330 Aconitase family (aconitate hydratase) D0887_RS16375 PF00694 Aconitase C-terminal domain D0887_RS16380 PF00724 NADH:flavin oxidoreductase / NADH oxidase family D0887_RS16380 PF07992 Pyridine nucleotide-disulphide oxidoreductase D0887_RS16385 PF08501 Shikimate dehydrogenase substrate binding domain D0887_RS16385 PF18317 Shikimate 5'-dehydrogenase C-terminal domain D0887_RS16390 PF07690 Major Facilitator Superfamily D0887_RS16395 PF01487 Type I 3-dehydroquinase D0887_RS16405 PF07690 Major Facilitator Superfamily D0887_RS16410 PF07690 Major Facilitator Superfamily D0887_RS16420 PF12793 Sugar transport-related sRNA regulator N-term D0887_RS16420 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D0887_RS16430 PF00528 Binding-protein-dependent transport system inner membrane component D0887_RS16435 PF00005 ABC transporter D0887_RS16440 PF09335 SNARE associated Golgi protein D0887_RS16445 PF12833 Helix-turn-helix domain D0887_RS16445 PF02311 AraC-like ligand binding domain D0887_RS16450 PF02782 FGGY family of carbohydrate kinases, C-terminal domain D0887_RS16455 PF11762 L-arabinose isomerase C-terminal domain D0887_RS16455 PF02610 L-arabinose isomerase D0887_RS16460 PF00596 Class II Aldolase and Adducin N-terminal domain D0887_RS16465 PF03104 DNA polymerase family B, exonuclease domain D0887_RS16465 PF00136 DNA polymerase family B D0887_RS16470 PF18339 RapA N-terminal Tudor like domain 1 D0887_RS16470 PF18337 RapA N-terminal Tudor like domain D0887_RS16470 PF00176 SNF2 family N-terminal domain D0887_RS16470 PF00271 Helicase conserved C-terminal domain D0887_RS16470 PF12137 RNA polymerase recycling family C-terminal D0887_RS16475 PF00849 RNA pseudouridylate synthase D0887_RS16480 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase D0887_RS16490 PF03390 2-hydroxycarboxylate transporter family D0887_RS16495 PF17203 Single cache domain 3 D0887_RS16495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0887_RS16500 PF00072 Response regulator receiver domain D0887_RS16500 PF12431 Transcriptional regulator D0887_RS16505 PF00226 DnaJ domain D0887_RS16505 PF05099 Tellurite resistance protein TerB D0887_RS16510 PF04453 LPS transport system D D0887_RS16510 PF03968 OstA-like protein D0887_RS16515 PF09312 SurA N-terminal domain D0887_RS16515 PF00639 PPIC-type PPIASE domain D0887_RS16520 PF04166 Pyridoxal phosphate biosynthetic protein PdxA D0887_RS16525 PF00398 Ribosomal RNA adenine dimethylase D0887_RS16530 PF04379 ApaG domain D0887_RS16535 PF00149 Calcineurin-like phosphoesterase D0887_RS16540 PF00186 Dihydrofolate reductase D0887_RS16550 PF00999 Sodium/hydrogen exchanger family D0887_RS16550 PF02254 TrkA-N domain D0887_RS16555 PF02525 Flavodoxin-like fold D0887_RS16560 PF06004 Bacterial protein of unknown function (DUF903) D0887_RS16565 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain D0887_RS16565 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain D0887_RS16565 PF02142 MGS-like domain D0887_RS16570 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain D0887_RS16570 PF00117 Glutamine amidotransferase class-I D0887_RS16580 PF05173 Dihydrodipicolinate reductase, C-terminus D0887_RS16580 PF01113 Dihydrodipicolinate reductase, N-terminus D0887_RS16585 PF01411 tRNA synthetases class II (A) D0887_RS16585 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain D0887_RS16585 PF02272 DHHA1 domain D0887_RS16590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0887_RS16590 PF03466 LysR substrate binding domain D0887_RS16595 PF05656 Protein of unknown function (DUF805) D0887_RS16600 PF01156 Inosine-uridine preferring nucleoside hydrolase D0887_RS16605 PF02401 LytB protein D0887_RS16610 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D0887_RS16615 PF01252 Signal peptidase (SPase) II D0887_RS16620 PF06827 Zinc finger found in FPG and IleRS D0887_RS16620 PF08264 Anticodon-binding domain of tRNA D0887_RS16620 PF00133 tRNA synthetases class I (I, L, M and V) D0887_RS16625 PF06574 FAD synthetase D0887_RS16625 PF01687 Riboflavin kinase D0887_RS16635 PF01649 Ribosomal protein S20 D0887_RS16640 PF03466 LysR substrate binding domain D0887_RS16640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0887_RS16645 PF06965 Na+/H+ antiporter 1 D0887_RS16650 PF00226 DnaJ domain D0887_RS16650 PF01556 DnaJ C terminal domain D0887_RS16650 PF00684 DnaJ central domain D0887_RS16655 PF00012 Hsp70 protein D0887_RS16660 PF10807 Protein of unknown function (DUF2541) D0887_RS16665 PF13099 Domain of unknown function (DUF3944) D0887_RS16665 PF03981 Ubiquinol-cytochrome C chaperone D0887_RS16670 PF01184 GPR1/FUN34/yaaH family D0887_RS16675 PF07690 Major Facilitator Superfamily D0887_RS16680 PF00994 Probable molybdopterin binding domain D0887_RS16685 PF00923 Transaldolase/Fructose-6-phosphate aldolase D0887_RS16690 PF01235 Sodium:alanine symporter family D0887_RS16695 PF03883 Peroxide stress protein YaaA D0887_RS16705 PF14821 Threonine synthase N terminus D0887_RS16705 PF00291 Pyridoxal-phosphate dependent enzyme D0887_RS16710 PF00288 GHMP kinases N terminal domain D0887_RS16710 PF08544 GHMP kinases C terminal D0887_RS16715 PF00742 Homoserine dehydrogenase D0887_RS16715 PF00696 Amino acid kinase family D0887_RS16715 PF01842 ACT domain D0887_RS16715 PF13840 ACT domain D0887_RS16715 PF03447 Homoserine dehydrogenase, NAD binding domain D0887_RS16720 PF08254 Threonine leader peptide D0887_RS16725 PF00588 SpoU rRNA Methylase family D0887_RS16740 PF00072 Response regulator receiver domain D0887_RS16740 PF00486 Transcriptional regulatory protein, C terminal D0887_RS16745 PF06123 Inner membrane protein CreD D0887_RS16750 PF00512 His Kinase A (phospho-acceptor) domain D0887_RS16750 PF00672 HAMP domain D0887_RS16750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0887_RS16755 PF00072 Response regulator receiver domain D0887_RS16755 PF00486 Transcriptional regulatory protein, C terminal D0887_RS16760 PF05981 CreA protein D0887_RS16765 PF12833 Helix-turn-helix domain D0887_RS16765 PF06445 GyrI-like small molecule binding domain D0887_RS16770 PF00300 Histidine phosphatase superfamily (branch 1) D0887_RS16775 PF01931 Protein of unknown function DUF84 D0887_RS16780 PF01371 Trp repressor protein D0887_RS16785 PF14718 Soluble lytic murein transglycosylase L domain D0887_RS16785 PF01464 Transglycosylase SLT domain D0887_RS16795 PF12848 ABC transporter D0887_RS16795 PF00005 ABC transporter D0887_RS16800 PF01381 Helix-turn-helix D0887_RS16800 PF13521 AAA domain D0887_RS16805 PF18073 Rubredoxin metal binding domain D0887_RS16810 PF18429 Domain of unknown function (DUF5609) D0887_RS16820 PF10144 Bacterial virulence factor haemolysin D0887_RS16825 PF10437 Bacterial lipoate protein ligase C-terminus D0887_RS16825 PF03099 Biotin/lipoate A/B protein ligase family D0887_RS16830 PF01048 Phosphorylase superfamily D0887_RS16835 PF01676 Metalloenzyme superfamily D0887_RS16840 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain D0887_RS16840 PF00591 Glycosyl transferase family, a/b domain D0887_RS16840 PF02885 Glycosyl transferase family, helical bundle domain D0887_RS16845 PF01791 DeoC/LacD family aldolase D0887_RS16850 PF01773 Na+ dependent nucleoside transporter N-terminus D0887_RS16850 PF07662 Na+ dependent nucleoside transporter C-terminus D0887_RS16850 PF07670 Nucleoside recognition D0887_RS16855 PF01026 TatD related DNase D0887_RS16860 PF01734 Patatin-like phospholipase D0887_RS16865 PF07043 Protein of unknown function (DUF1328) D0887_RS16870 PF04972 BON domain D0887_RS16875 PF00009 Elongation factor Tu GTP binding domain D0887_RS16875 PF03144 Elongation factor Tu domain 2 D0887_RS16875 PF16658 Class II release factor RF3, C-terminal domain D0887_RS16880 PF13419 Haloacid dehalogenase-like hydrolase D0887_RS16885 PF00583 Acetyltransferase (GNAT) family D0887_RS16890 PF03603 DNA polymerase III psi subunit D0887_RS16895 PF05175 Methyltransferase small domain D0887_RS16895 PF08468 Methyltransferase small domain N-terminal D0887_RS16920 PF00990 Diguanylate cyclase, GGDEF domain D0887_RS16925 PF11575 FhuF 2Fe-2S C-terminal domain D0887_RS16925 PF06276 Ferric iron reductase FhuF-like transporter D0887_RS16930 PF02378 Phosphotransferase system, EIIC D0887_RS16930 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit D0887_RS16935 PF04073 Aminoacyl-tRNA editing domain D0887_RS16940 PF00196 Bacterial regulatory proteins, luxR family D0887_RS16945 PF00196 Bacterial regulatory proteins, luxR family D0887_RS16955 PF01494 FAD binding domain D0887_RS16965 PF06738 Putative threonine/serine exporter D0887_RS16970 PF12821 Threonine/Serine exporter, ThrE D0887_RS16975 PF17948 DnaT DNA-binding domain D0887_RS16980 PF01695 IstB-like ATP binding protein D0887_RS16985 PF10696 Protein of unknown function (DUF2501) D0887_RS16990 PF00884 Sulfatase D0887_RS16995 PF04754 Putative transposase, YhgA-like D0887_RS17000 PF01380 SIS domain D0887_RS17005 PF01380 SIS domain D0887_RS17010 PF03613 PTS system mannose/fructose/sorbose family IID component D0887_RS17015 PF03609 PTS system sorbose-specific iic component D0887_RS17020 PF03830 PTS system sorbose subfamily IIB component D0887_RS17025 PF03830 PTS system sorbose subfamily IIB component D0887_RS17025 PF03610 PTS system fructose IIA component D0887_RS17030 PF00874 PRD domain D0887_RS17030 PF00158 Sigma-54 interaction domain D0887_RS17030 PF03610 PTS system fructose IIA component D0887_RS17035 PF08125 Mannitol dehydrogenase C-terminal domain D0887_RS17035 PF01232 Mannitol dehydrogenase Rossmann domain D0887_RS17040 PF00107 Zinc-binding dehydrogenase D0887_RS17040 PF08240 Alcohol dehydrogenase GroES-like domain D0887_RS17045 PF07729 FCD domain D0887_RS17045 PF00392 Bacterial regulatory proteins, gntR family D0887_RS17050 PF07690 Major Facilitator Superfamily D0887_RS17055 PF00814 Glycoprotease family D0887_RS17055 PF00583 Acetyltransferase (GNAT) family D0887_RS17060 PF00583 Acetyltransferase (GNAT) family D0887_RS17065 PF01380 SIS domain D0887_RS17065 PF01418 Helix-turn-helix domain, rpiR family D0887_RS17070 PF01081 KDPG and KHG aldolase D0887_RS17075 PF05035 2-keto-3-deoxy-galactonokinase D0887_RS17090 PF07969 Amidohydrolase family D0887_RS17105 PF02615 Malate/L-lactate dehydrogenase D0887_RS17120 PF01047 MarR family D0887_RS17125 PF01557 Fumarylacetoacetate (FAA) hydrolase family D0887_RS17130 PF01557 Fumarylacetoacetate (FAA) hydrolase family D0887_RS17135 PF00171 Aldehyde dehydrogenase family D0887_RS17140 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase D0887_RS17145 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase D0887_RS17150 PF01557 Fumarylacetoacetate (FAA) hydrolase family D0887_RS17155 PF03328 HpcH/HpaI aldolase/citrate lyase family D0887_RS17160 PF07690 Major Facilitator Superfamily D0887_RS17165 PF12833 Helix-turn-helix domain D0887_RS17170 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal D0887_RS17170 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal D0887_RS17175 PF01613 Flavin reductase like domain D0887_RS17190 PF13722 5TM C-terminal transporter carbon starvation CstA D0887_RS17190 PF02554 Carbon starvation protein CstA D0887_RS17195 PF04328 Selenoprotein, putative D0887_RS17200 PF02492 CobW/HypB/UreG, nucleotide-binding domain D0887_RS17200 PF07683 Cobalamin synthesis protein cobW C-terminal domain D0887_RS17210 PF00171 Aldehyde dehydrogenase family D0887_RS17215 PF04754 Putative transposase, YhgA-like D0887_RS17220 PF02311 AraC-like ligand binding domain D0887_RS17220 PF12833 Helix-turn-helix domain D0887_RS17230 PF04286 Protein of unknown function (DUF445) D0887_RS17235 PF07690 Major Facilitator Superfamily D0887_RS17245 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component D0887_RS17250 PF01869 BadF/BadG/BcrA/BcrD ATPase family D0887_RS17255 PF11823 Protein of unknown function (DUF3343) D0887_RS17265 PF00529 HlyD membrane-fusion protein of T1SS D0887_RS17265 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D0887_RS17275 PF06568 Domain of unknown function (DUF1127) D0887_RS17280 PF00155 Aminotransferase class I and II D0887_RS17280 PF00392 Bacterial regulatory proteins, gntR family D0887_RS17285 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D0887_RS17290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0887_RS17290 PF03466 LysR substrate binding domain D0887_RS17295 PF02525 Flavodoxin-like fold D0887_RS17300 PF02653 Branched-chain amino acid transport system / permease component D0887_RS17305 PF02653 Branched-chain amino acid transport system / permease component D0887_RS17310 PF00005 ABC transporter D0887_RS17315 PF13407 Periplasmic binding protein domain D0887_RS17320 PF00579 tRNA synthetases class I (W and Y) D0887_RS17325 PF00990 Diguanylate cyclase, GGDEF domain D0887_RS17330 PF13533 Biotin-lipoyl like D0887_RS17335 PF00005 ABC transporter D0887_RS17375 PF08007 Cupin superfamily protein D0887_RS17390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0887_RS17390 PF00672 HAMP domain D0887_RS17390 PF00512 His Kinase A (phospho-acceptor) domain D0887_RS17395 PF00072 Response regulator receiver domain D0887_RS17395 PF00486 Transcriptional regulatory protein, C terminal D0887_RS17405 PF02321 Outer membrane efflux protein D0887_RS17410 PF11604 Copper binding periplasmic protein CusF D0887_RS17415 PF00529 HlyD membrane-fusion protein of T1SS D0887_RS17415 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D0887_RS17420 PF00873 AcrB/AcrD/AcrF family D0887_RS17430 PF08212 Lipocalin-like domain D0887_RS17435 PF13411 MerR HTH family regulatory protein D0887_RS17445 PF00106 short chain dehydrogenase D0887_RS17480 PF08349 Protein of unknown function (DUF1722) D0887_RS17485 PF02264 LamB porin D0887_RS17500 PF04616 Glycosyl hydrolases family 43 D0887_RS17500 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain D0887_RS17520 PF00535 Glycosyl transferase family 2 D0887_RS17575 PF04471 Restriction endonuclease D0887_RS17575 PF14338 Mrr N-terminal domain D0887_RS17595 PF13737 Transposase DDE domain D0887_RS17615 PF00589 Phage integrase family D0887_RS17615 PF13356 Arm DNA-binding domain D0887_RS17655 PF07992 Pyridine nucleotide-disulphide oxidoreductase D0887_RS17655 PF13192 Thioredoxin domain D0887_RS17660 PF02082 Transcriptional regulator D0887_RS17675 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain D0887_RS17675 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain D0887_RS17680 PF01965 DJ-1/PfpI family D0887_RS17680 PF12833 Helix-turn-helix domain D0887_RS17685 PF13737 Transposase DDE domain D0887_RS17695 PF07690 Major Facilitator Superfamily D0887_RS17700 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase D0887_RS17700 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain D0887_RS17705 PF03466 LysR substrate binding domain D0887_RS17705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0887_RS17725 PF07690 Major Facilitator Superfamily D0887_RS17725 PF00083 Sugar (and other) transporter D0887_RS17730 PF00171 Aldehyde dehydrogenase family D0887_RS17735 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase D0887_RS17735 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D0887_RS17740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0887_RS17740 PF03466 LysR substrate binding domain D0887_RS17755 PF00484 Carbonic anhydrase D0887_RS17760 PF01740 STAS domain D0887_RS17760 PF00916 Sulfate permease family D0887_RS17765 PF00107 Zinc-binding dehydrogenase D0887_RS17765 PF08240 Alcohol dehydrogenase GroES-like domain D0887_RS17770 PF00528 Binding-protein-dependent transport system inner membrane component D0887_RS17775 PF00528 Binding-protein-dependent transport system inner membrane component D0887_RS17780 PF00149 Calcineurin-like phosphoesterase D0887_RS17785 PF00005 ABC transporter D0887_RS17785 PF17912 MalK OB fold domain D0887_RS17795 PF13416 Bacterial extracellular solute-binding protein D0887_RS17800 PF01261 Xylose isomerase-like TIM barrel D0887_RS17805 PF01261 Xylose isomerase-like TIM barrel D0887_RS17810 PF02894 Oxidoreductase family, C-terminal alpha/beta domain D0887_RS17810 PF01408 Oxidoreductase family, NAD-binding Rossmann fold D0887_RS17815 PF00205 Thiamine pyrophosphate enzyme, central domain D0887_RS17815 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D0887_RS17815 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D0887_RS17820 PF00294 pfkB family carbohydrate kinase D0887_RS17825 PF02685 Glucokinase D0887_RS17825 PF01418 Helix-turn-helix domain, rpiR family D0887_RS17825 PF01380 SIS domain D0887_RS17840 PF04962 KduI/IolB family D0887_RS17845 PF00171 Aldehyde dehydrogenase family D0887_RS17855 PF05872 Bacterial protein of unknown function (DUF853) D0887_RS17860 PF03739 Lipopolysaccharide export system permease LptF/LptG D0887_RS17865 PF03739 Lipopolysaccharide export system permease LptF/LptG D0887_RS17875 PF02789 Cytosol aminopeptidase family, N-terminal domain D0887_RS17875 PF00883 Cytosol aminopeptidase family, catalytic domain D0887_RS17880 PF04364 DNA polymerase III chi subunit, HolC D0887_RS17885 PF08264 Anticodon-binding domain of tRNA D0887_RS17885 PF00133 tRNA synthetases class I (I, L, M and V) D0887_RS17885 PF10458 Valyl tRNA synthetase tRNA binding arm D0887_RS17890 PF00583 Acetyltransferase (GNAT) family D0887_RS17895 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) D0887_RS17900 PF06877 Regulator of ribonuclease activity B D0887_RS17905 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain D0887_RS17905 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain D0887_RS17910 PF04074 YhcH/YjgK/YiaL D0887_RS17925 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain D0887_RS17925 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain D0887_RS17930 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain D0887_RS17930 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain D0887_RS17935 PF01042 Endoribonuclease L-PSP D0887_RS17940 PF00690 Cation transporter/ATPase, N-terminus D0887_RS17940 PF00689 Cation transporting ATPase, C-terminus D0887_RS17950 PF00356 Bacterial regulatory proteins, lacI family D0887_RS17955 PF00367 phosphotransferase system, EIIB D0887_RS17955 PF02378 Phosphotransferase system, EIIC D0887_RS17960 PF11941 Domain of unknown function (DUF3459) D0887_RS17960 PF00128 Alpha amylase, catalytic domain D0887_RS17965 PF02378 Phosphotransferase system, EIIC D0887_RS17970 PF11975 Family 4 glycosyl hydrolase C-terminal domain D0887_RS17970 PF02056 Family 4 glycosyl hydrolase D0887_RS17975 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit D0887_RS17985 PF03477 ATP cone domain D0887_RS17985 PF13597 Anaerobic ribonucleoside-triphosphate reductase D0887_RS17995 PF05016 ParE toxin of type II toxin-antitoxin system, parDE D0887_RS18000 PF04221 RelB antitoxin D0887_RS18005 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D0887_RS18005 PF08279 HTH domain D0887_RS18005 PF00874 PRD domain D0887_RS18005 PF05043 Mga helix-turn-helix domain D0887_RS18010 PF10282 Lactonase, 7-bladed beta-propeller D0887_RS18015 PF07071 KDGP aldolase D0887_RS18020 PF03841 L-seryl-tRNA selenium transferase D0887_RS18025 PF01979 Amidohydrolase family D0887_RS18055 PF07361 Cytochrome b562 D0887_RS18060 PF01523 Putative modulator of DNA gyrase D0887_RS18065 PF04751 Protein of unknown function (DUF615) D0887_RS18085 PF08245 Mur ligase middle domain D0887_RS18085 PF01225 Mur ligase family, catalytic domain D0887_RS18085 PF02875 Mur ligase family, glutamate ligase domain D0887_RS18090 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain D0887_RS18095 PF02653 Branched-chain amino acid transport system / permease component D0887_RS18100 PF02653 Branched-chain amino acid transport system / permease component D0887_RS18105 PF00005 ABC transporter D0887_RS18110 PF13407 Periplasmic binding protein domain D0887_RS18115 PF00719 Inorganic pyrophosphatase D0887_RS18125 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like D0887_RS18130 PF04357 TamB, inner membrane protein subunit of TAM complex D0887_RS18135 PF17243 POTRA domain TamA domain 1 D0887_RS18135 PF07244 Surface antigen variable number repeat D0887_RS18135 PF01103 Surface antigen D0887_RS18140 PF01625 Peptide methionine sulfoxide reductase D0887_RS18145 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase D0887_RS18150 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit D0887_RS18155 PF00364 Biotin-requiring enzyme D0887_RS18155 PF02436 Conserved carboxylase domain D0887_RS18155 PF00682 HMGL-like D0887_RS18160 PF04277 Oxaloacetate decarboxylase, gamma chain D0887_RS18165 PF01566 Natural resistance-associated macrophage protein D0887_RS18170 PF00701 Dihydrodipicolinate synthetase family D0887_RS18175 PF00356 Bacterial regulatory proteins, lacI family D0887_RS18180 PF06178 Oligogalacturonate-specific porin protein (KdgM) D0887_RS18185 PF00571 CBS domain D0887_RS18185 PF03471 Transporter associated domain D0887_RS18185 PF01595 Cyclin M transmembrane N-terminal domain D0887_RS18195 PF02449 Beta-galactosidase D0887_RS18195 PF08533 Beta-galactosidase C-terminal domain D0887_RS18195 PF08532 Beta-galactosidase trimerisation domain D0887_RS18200 PF02311 AraC-like ligand binding domain D0887_RS18200 PF12833 Helix-turn-helix domain D0887_RS18205 PF06526 Protein of unknown function (DUF1107) D0887_RS18210 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) D0887_RS18215 PF00459 Inositol monophosphatase family D0887_RS18220 PF00149 Calcineurin-like phosphoesterase D0887_RS18220 PF02872 5'-nucleotidase, C-terminal domain D0887_RS18225 PF01638 HxlR-like helix-turn-helix D0887_RS18230 PF05368 NmrA-like family D0887_RS18235 PF12833 Helix-turn-helix domain D0887_RS18240 PF00892 EamA-like transporter family D0887_RS18245 PF04405 Domain of Unknown function (DUF542) D0887_RS18245 PF01814 Hemerythrin HHE cation binding domain D0887_RS18250 PF00324 Amino acid permease D0887_RS18255 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase D0887_RS18255 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D0887_RS18260 PF04225 Opacity-associated protein A LysM-like domain D0887_RS18260 PF08525 Opacity-associated protein A N-terminal motif D0887_RS18265 PF03948 Ribosomal protein L9, C-terminal domain D0887_RS18265 PF01281 Ribosomal protein L9, N-terminal domain D0887_RS18270 PF01084 Ribosomal protein S18 D0887_RS18275 PF00436 Single-strand binding protein family D0887_RS18280 PF01250 Ribosomal protein S6 D0887_RS18285 PF07338 Protein of unknown function (DUF1471) D0887_RS18290 PF07690 Major Facilitator Superfamily D0887_RS18295 PF00596 Class II Aldolase and Adducin N-terminal domain D0887_RS18300 PF01261 Xylose isomerase-like TIM barrel D0887_RS18305 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family D0887_RS18310 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D0887_RS18315 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit D0887_RS18320 PF03611 PTS system sugar-specific permease component D0887_RS18330 PF08220 DeoR-like helix-turn-helix domain D0887_RS18330 PF00455 DeoR C terminal sensor domain D0887_RS18335 PF00326 Prolyl oligopeptidase family D0887_RS18340 PF07338 Protein of unknown function (DUF1471) D0887_RS18345 PF07338 Protein of unknown function (DUF1471) D0887_RS18350 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D0887_RS18350 PF18158 Adaptive response protein AidB N-terminal domain D0887_RS18350 PF02770 Acyl-CoA dehydrogenase, middle domain D0887_RS18355 PF08032 RNA 2'-O ribose methyltransferase substrate binding D0887_RS18355 PF00588 SpoU rRNA Methylase family D0887_RS18360 PF08206 Ribonuclease B OB domain D0887_RS18360 PF00575 S1 RNA binding domain D0887_RS18360 PF08461 Ribonuclease R winged-helix domain D0887_RS18360 PF00773 RNB domain D0887_RS18360 PF17876 Cold shock domain D0887_RS18365 PF02082 Transcriptional regulator D0887_RS18370 PF00709 Adenylosuccinate synthetase D0887_RS18375 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) D0887_RS18385 PF01145 SPFH domain / Band 7 family D0887_RS18390 PF01145 SPFH domain / Band 7 family D0887_RS18390 PF12221 Bacterial membrane protein N terminal D0887_RS18395 PF13167 GTP-binding GTPase N-terminal D0887_RS18395 PF16360 GTP-binding GTPase Middle Region D0887_RS18395 PF01926 50S ribosome-binding GTPase D0887_RS18400 PF17209 Hfq protein D0887_RS18410 PF01119 DNA mismatch repair protein, C-terminal domain D0887_RS18410 PF08676 MutL C terminal dimerisation domain D0887_RS18415 PF01520 N-acetylmuramoyl-L-alanine amidase D0887_RS18420 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE D0887_RS18425 PF01256 Carbohydrate kinase D0887_RS18425 PF03853 YjeF-related protein N-terminus D0887_RS18430 PF08331 Domain of unknown function (DUF1730) D0887_RS18455 PF00497 Bacterial extracellular solute-binding proteins, family 3 D0887_RS18460 PF00929 Exonuclease D0887_RS18470 PF03193 RsgA GTPase D0887_RS18475 PF02666 Phosphatidylserine decarboxylase D0887_RS18480 PF00924 Mechanosensitive ion channel D0887_RS18480 PF12794 Mechanosensitive ion channel inner membrane domain 1 D0887_RS18480 PF12795 Mechanosensitive ion channel porin domain D0887_RS18485 PF13520 Amino acid permease D0887_RS18490 PF00152 tRNA synthetases class II (D, K and N) D0887_RS18495 PF02910 Fumarate reductase flavoprotein C-term D0887_RS18495 PF00890 FAD binding domain D0887_RS18500 PF13085 2Fe-2S iron-sulfur cluster binding domain D0887_RS18500 PF13183 4Fe-4S dicluster domain D0887_RS18505 PF02300 Fumarate reductase subunit C D0887_RS18510 PF02313 Fumarate reductase subunit D D0887_RS18515 PF08212 Lipocalin-like domain D0887_RS18520 PF00893 Small Multidrug Resistance protein D0887_RS18525 PF08085 Entericidin EcnA/B family D0887_RS18535 PF09285 Elongation factor P, C-terminal D0887_RS18535 PF08207 Elongation factor P (EF-P) KOW-like domain D0887_RS18535 PF01132 Elongation factor P (EF-P) OB domain D0887_RS18540 PF04055 Radical SAM superfamily D0887_RS18555 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain D0887_RS18555 PF02753 Pili assembly chaperone PapD, C-terminal domain D0887_RS18560 PF00577 Outer membrane usher protein D0887_RS18560 PF13954 PapC N-terminal domain D0887_RS18560 PF13953 PapC C-terminal domain D0887_RS18575 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D0887_RS18575 PF00529 HlyD membrane-fusion protein of T1SS D0887_RS18580 PF03412 Peptidase C39 family D0887_RS18580 PF00005 ABC transporter D0887_RS18580 PF00664 ABC transporter transmembrane region D0887_RS18590 PF13698 Domain of unknown function (DUF4156) D0887_RS18595 PF00118 TCP-1/cpn60 chaperonin family D0887_RS18600 PF00166 Chaperonin 10 Kd subunit D0887_RS18605 PF13520 Amino acid permease D0887_RS18610 PF04186 FxsA cytoplasmic membrane protein D0887_RS18620 PF10415 Fumarase C C-terminus D0887_RS18620 PF00206 Lyase D0887_RS18625 PF03605 Anaerobic c4-dicarboxylate membrane transporter D0887_RS18630 PF03091 CutA1 divalent ion tolerance protein D0887_RS18635 PF02683 Cytochrome C biogenesis protein transmembrane region D0887_RS18635 PF11412 Disulphide bond corrector protein DsbC D0887_RS18695 PF14883 Hypothetical glycosyl hydrolase family 13 D0887_RS18695 PF01522 Polysaccharide deacetylase D0887_RS18700 PF00535 Glycosyl transferase family 2 D0887_RS18720 PF03741 Integral membrane protein TerC family D0887_RS18725 PF00226 DnaJ domain D0887_RS18725 PF01556 DnaJ C terminal domain D0887_RS18740 PF06406 StbA protein D0887_RS18750 PF02056 Family 4 glycosyl hydrolase D0887_RS18750 PF11975 Family 4 glycosyl hydrolase C-terminal domain D0887_RS18760 PF12833 Helix-turn-helix domain D0887_RS18765 PF08946 Osmosensory transporter coiled coil D0887_RS18765 PF00083 Sugar (and other) transporter D0887_RS18775 PF08274 PhnA Zinc-Ribbon D0887_RS18775 PF03831 PhnA domain D0887_RS18780 PF06983 3-demethylubiquinone-9 3-methyltransferase D0887_RS18785 PF00392 Bacterial regulatory proteins, gntR family D0887_RS18785 PF07702 UTRA domain D0887_RS18790 PF06754 Phosphonate metabolism protein PhnG D0887_RS18795 PF05845 Bacterial phosphonate metabolism protein (PhnH) D0887_RS18800 PF05861 Bacterial phosphonate metabolism protein (PhnI) D0887_RS18805 PF06007 Phosphonate metabolism protein PhnJ D0887_RS18810 PF00005 ABC transporter D0887_RS18815 PF00005 ABC transporter D0887_RS18820 PF07969 Amidohydrolase family D0887_RS18830 PF12706 Beta-lactamase superfamily domain D0887_RS18840 PF00072 Response regulator receiver domain D0887_RS18840 PF13426 PAS domain D0887_RS18840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0887_RS18845 PF00005 ABC transporter D0887_RS18850 PF02653 Branched-chain amino acid transport system / permease component D0887_RS18855 PF13407 Periplasmic binding protein domain D0887_RS18865 PF00072 Response regulator receiver domain D0887_RS18865 PF00486 Transcriptional regulatory protein, C terminal D0887_RS18875 PF08238 Sel1 repeat D0887_RS18880 PF00375 Sodium:dicarboxylate symporter family D0887_RS18890 PF00501 AMP-binding enzyme D0887_RS18890 PF13193 AMP-binding enzyme C-terminal domain D0887_RS18890 PF16177 Acetyl-coenzyme A synthetase N-terminus D0887_RS18900 PF04341 Protein of unknown function, DUF485 D0887_RS18905 PF00474 Sodium:solute symporter family D0887_RS18920 PF13953 PapC C-terminal domain D0887_RS18920 PF13954 PapC N-terminal domain D0887_RS18920 PF00577 Outer membrane usher protein D0887_RS18925 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain D0887_RS18925 PF02753 Pili assembly chaperone PapD, C-terminal domain D0887_RS18930 PF00419 Fimbrial protein D0887_RS18935 PF04172 LrgB-like family D0887_RS18940 PF03788 LrgA family D0887_RS18945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0887_RS18945 PF03466 LysR substrate binding domain D0887_RS18950 PF00999 Sodium/hydrogen exchanger family D0887_RS18955 PF00860 Permease family D0887_RS18960 PF00043 Glutathione S-transferase, C-terminal domain D0887_RS18960 PF02798 Glutathione S-transferase, N-terminal domain D0887_RS18970 PF09278 MerR, DNA binding D0887_RS18970 PF00376 MerR family regulatory protein D0887_RS18975 PF12833 Helix-turn-helix domain D0887_RS18980 PF00563 EAL domain D0887_RS18980 PF12792 CSS motif domain associated with EAL D0887_RS18990 PF15940 Family of unknown function D0887_RS18995 PF00528 Binding-protein-dependent transport system inner membrane component D0887_RS19010 PF00005 ABC transporter D0887_RS19010 PF08402 TOBE domain D0887_RS19015 PF12706 Beta-lactamase superfamily domain D0887_RS19015 PF00753 Metallo-beta-lactamase superfamily D0887_RS19020 PF00356 Bacterial regulatory proteins, lacI family D0887_RS19025 PF00459 Inositol monophosphatase family D0887_RS19040 PF07244 Surface antigen variable number repeat D0887_RS19040 PF01103 Surface antigen D0887_RS19050 PF07519 Tannase and feruloyl esterase D0887_RS19055 PF12833 Helix-turn-helix domain D0887_RS19060 PF00593 TonB dependent receptor D0887_RS19060 PF07715 TonB-dependent Receptor Plug Domain D0887_RS19065 PF01464 Transglycosylase SLT domain D0887_RS19070 PF00436 Single-strand binding protein family D0887_RS19080 PF00005 ABC transporter D0887_RS19080 PF17755 UvrA DNA-binding domain D0887_RS19080 PF17760 UvrA interaction domain D0887_RS19085 PF04237 YjbR D0887_RS19090 PF01894 Uncharacterised protein family UPF0047 D0887_RS19095 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) D0887_RS19100 PF00155 Aminotransferase class I and II D0887_RS19105 PF01168 Alanine racemase, N-terminal domain D0887_RS19105 PF00842 Alanine racemase, C-terminal domain D0887_RS19110 PF00772 DnaB-like helicase N terminal domain D0887_RS19110 PF03796 DnaB-like helicase C terminal domain D0887_RS19115 PF08240 Alcohol dehydrogenase GroES-like domain D0887_RS19115 PF00107 Zinc-binding dehydrogenase D0887_RS19120 PF09583 Phage shock protein G (Phageshock_PspG) D0887_RS19125 PF01207 Dihydrouridine synthase (Dus) D0887_RS19135 PF01475 Ferric uptake regulator family D0887_RS19140 PF05532 CsbD-like D0887_RS19145 PF01554 MatE D0887_RS19150 PF01726 LexA DNA binding domain D0887_RS19150 PF00717 Peptidase S24-like D0887_RS19155 PF01219 Prokaryotic diacylglycerol kinase D0887_RS19160 PF01553 Acyltransferase D0887_RS19165 PF01040 UbiA prenyltransferase family D0887_RS19170 PF04345 Chorismate lyase D0887_RS19175 PF07148 Maltose operon periplasmic protein precursor (MalM) D0887_RS19180 PF02264 LamB porin D0887_RS19185 PF17912 MalK OB fold domain D0887_RS19185 PF00005 ABC transporter D0887_RS19195 PF01547 Bacterial extracellular solute-binding protein D0887_RS19200 PF00528 Binding-protein-dependent transport system inner membrane component D0887_RS19200 PF14785 Maltose transport system permease protein MalF P2 domain D0887_RS19205 PF00528 Binding-protein-dependent transport system inner membrane component D0887_RS19210 PF06146 Phosphate-starvation-inducible E D0887_RS19215 PF03313 Serine dehydratase alpha chain D0887_RS19230 PF01042 Endoribonuclease L-PSP D0887_RS19240 PF12804 MobA-like NTP transferase domain D0887_RS19240 PF14602 Hexapeptide repeat of succinyl-transferase D0887_RS19240 PF00132 Bacterial transferase hexapeptide (six repeats) D0887_RS19245 PF00342 Phosphoglucose isomerase D0887_RS19260 PF01842 ACT domain D0887_RS19260 PF00696 Amino acid kinase family D0887_RS19265 PF01758 Sodium Bile acid symporter family D0887_RS19270 PF11656 YjbD family (DUF3811) D0887_RS19275 PF01479 S4 domain D0887_RS19275 PF00849 RNA pseudouridylate synthase D0887_RS19280 PF03575 Peptidase family S51 D0887_RS19285 PF02690 Na+/Pi-cotransporter D0887_RS19290 PF02607 B12 binding domain D0887_RS19290 PF02965 Vitamin B12 dependent methionine synthase, activation domain D0887_RS19290 PF00809 Pterin binding enzyme D0887_RS19290 PF02310 B12 binding domain D0887_RS19290 PF02574 Homocysteine S-methyltransferase D0887_RS19295 PF09339 IclR helix-turn-helix domain D0887_RS19295 PF01614 Bacterial transcriptional regulator D0887_RS19300 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) D0887_RS19305 PF00463 Isocitrate lyase family D0887_RS19310 PF01274 Malate synthase D0887_RS19315 PF04204 Homoserine O-succinyltransferase D0887_RS19320 PF13673 Acetyltransferase (GNAT) domain D0887_RS19355 PF02142 MGS-like domain D0887_RS19355 PF01808 AICARFT/IMPCHase bienzyme D0887_RS19360 PF02844 Phosphoribosylglycinamide synthetase, N domain D0887_RS19360 PF02843 Phosphoribosylglycinamide synthetase, C domain D0887_RS19360 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain D0887_RS19365 PF00072 Response regulator receiver domain D0887_RS19365 PF02954 Bacterial regulatory protein, Fis family D0887_RS19365 PF00158 Sigma-54 interaction domain D0887_RS19370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0887_RS19370 PF00512 His Kinase A (phospho-acceptor) domain D0887_RS19375 PF13801 Heavy-metal resistance D0887_RS19380 PF07356 Protein of unknown function (DUF1481) D0887_RS19385 PF00216 Bacterial DNA-binding protein D0887_RS19390 PF04222 Protein of unknown function (DUF416) D0887_RS19395 PF04493 Endonuclease V D0887_RS19400 PF01208 Uroporphyrinogen decarboxylase (URO-D) D0887_RS19405 PF00293 NUDIX domain D0887_RS19405 PF09297 NADH pyrophosphatase zinc ribbon domain D0887_RS19410 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ D0887_RS19415 PF13667 ThiC-associated domain D0887_RS19415 PF01964 Radical SAM ThiC family D0887_RS19420 PF02581 Thiamine monophosphate synthase D0887_RS19425 PF00899 ThiF family D0887_RS19430 PF02597 ThiS family D0887_RS19435 PF05690 Thiazole biosynthesis protein ThiG D0887_RS19440 PF06968 Biotin and Thiamin Synthesis associated domain D0887_RS19440 PF04055 Radical SAM superfamily D0887_RS19450 PF00990 Diguanylate cyclase, GGDEF domain D0887_RS19455 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit D0887_RS19460 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit D0887_RS19465 PF03605 Anaerobic c4-dicarboxylate membrane transporter D0887_RS19470 PF00623 RNA polymerase Rpb1, domain 2 D0887_RS19470 PF04983 RNA polymerase Rpb1, domain 3 D0887_RS19470 PF04997 RNA polymerase Rpb1, domain 1 D0887_RS19470 PF04998 RNA polymerase Rpb1, domain 5 D0887_RS19470 PF05000 RNA polymerase Rpb1, domain 4 D0887_RS19475 PF04561 RNA polymerase Rpb2, domain 2 D0887_RS19475 PF04565 RNA polymerase Rpb2, domain 3 D0887_RS19475 PF00562 RNA polymerase Rpb2, domain 6 D0887_RS19475 PF04563 RNA polymerase beta subunit D0887_RS19475 PF04560 RNA polymerase Rpb2, domain 7 D0887_RS19475 PF10385 RNA polymerase beta subunit external 1 domain D0887_RS19480 PF16320 Ribosomal protein L7/L12 dimerisation domain D0887_RS19480 PF00542 Ribosomal protein L7/L12 C-terminal domain D0887_RS19485 PF00466 Ribosomal protein L10 D0887_RS19495 PF00687 Ribosomal protein L1p/L10e family D0887_RS19500 PF00298 Ribosomal protein L11, RNA binding domain D0887_RS19500 PF03946 Ribosomal protein L11, N-terminal domain D0887_RS19505 PF00467 KOW motif D0887_RS19505 PF02357 Transcription termination factor nusG D0887_RS19510 PF00584 SecE/Sec61-gamma subunits of protein translocation complex D0887_RS19520 PF00009 Elongation factor Tu GTP binding domain D0887_RS19520 PF03144 Elongation factor Tu domain 2 D0887_RS19520 PF03143 Elongation factor Tu C-terminal domain D0887_RS19545 PF00485 Phosphoribulokinase / Uridine kinase family D0887_RS19550 PF03099 Biotin/lipoate A/B protein ligase family D0887_RS19550 PF08279 HTH domain D0887_RS19550 PF02237 Biotin protein ligase C terminal domain D0887_RS19555 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain D0887_RS19555 PF01565 FAD binding domain D0887_RS19585 PF12724 Flavodoxin domain D0887_RS19590 PF02386 Cation transport protein D0887_RS19595 PF09186 Domain of unknown function (DUF1949) D0887_RS19595 PF01205 Uncharacterized protein family UPF0029 D0887_RS19600 PF00557 Metallopeptidase family M24 D0887_RS19610 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain D0887_RS19610 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain D0887_RS19610 PF00378 Enoyl-CoA hydratase/isomerase D0887_RS19615 PF00108 Thiolase, N-terminal domain D0887_RS19615 PF02803 Thiolase, C-terminal domain D0887_RS19620 PF00970 Oxidoreductase FAD-binding domain D0887_RS19620 PF00175 Oxidoreductase NAD-binding domain D0887_RS19625 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase D0887_RS19630 PF02357 Transcription termination factor nusG D0887_RS19635 PF01026 TatD related DNase D0887_RS19640 PF00902 Sec-independent protein translocase protein (TatC) D0887_RS19650 PF02416 mttA/Hcf106 family D0887_RS19655 PF03109 ABC1 family D0887_RS19660 PF02036 SCP-2 sterol transfer family D0887_RS19665 PF01209 ubiE/COQ5 methyltransferase family D0887_RS19670 PF02646 RmuC family D0887_RS19675 PF01048 Phosphorylase superfamily D0887_RS19680 PF01738 Dienelactone hydrolase family D0887_RS19685 PF08267 Cobalamin-independent synthase, N-terminal domain D0887_RS19685 PF01717 Cobalamin-independent synthase, Catalytic domain D0887_RS19690 PF03466 LysR substrate binding domain D0887_RS19690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0887_RS19695 PF00892 EamA-like transporter family D0887_RS19705 PF12146 Serine aminopeptidase, S33 D0887_RS19710 PF01810 LysE type translocator D0887_RS19715 PF04754 Putative transposase, YhgA-like D0887_RS19720 PF01810 LysE type translocator D0887_RS19725 PF09382 RQC domain D0887_RS19725 PF16124 RecQ zinc-binding D0887_RS19725 PF00270 DEAD/DEAH box helicase D0887_RS19725 PF00570 HRDC domain D0887_RS19725 PF00271 Helicase conserved C-terminal domain D0887_RS19730 PF02253 Phospholipase A1 D0887_RS19735 PF03061 Thioesterase superfamily D0887_RS19740 PF00892 EamA-like transporter family D0887_RS19745 PF01544 CorA-like Mg2+ transporter protein D0887_RS19755 PF13361 UvrD-like helicase C-terminal domain D0887_RS19755 PF00580 UvrD/REP helicase N-terminal domain D0887_RS19760 PF13419 Haloacid dehalogenase-like hydrolase D0887_RS19765 PF02899 Phage integrase, N-terminal SAM-like domain D0887_RS19765 PF00589 Phage integrase family D0887_RS19770 PF04340 Protein of unknown function, DUF484 D0887_RS19775 PF01678 Diaminopimelate epimerase D0887_RS19780 PF13627 Prokaryotic lipoprotein-attachment site D0887_RS19785 PF01491 Frataxin-like domain D0887_RS19790 PF01295 Adenylate cyclase, class-I D0887_RS19790 PF12633 Adenylate cyclase NT domain D0887_RS19795 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain D0887_RS19795 PF03900 Porphobilinogen deaminase, C-terminal domain D0887_RS19800 PF02602 Uroporphyrinogen-III synthase HemD D0887_RS19805 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase D0887_RS19810 PF07719 Tetratricopeptide repeat D0887_RS19810 PF07219 HemY protein N-terminus D0887_RS19835 PF00324 Amino acid permease D0887_RS19840 PF03808 Glycosyl transferase WecB/TagA/CpsF family D0887_RS19845 PF06899 WzyE protein, O-antigen assembly polymerase D0887_RS19850 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 D0887_RS19855 PF01943 Polysaccharide biosynthesis protein D0887_RS19860 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family D0887_RS19870 PF00483 Nucleotidyl transferase D0887_RS19875 PF16363 GDP-mannose 4,6 dehydratase D0887_RS19880 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain D0887_RS19880 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain D0887_RS19880 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain D0887_RS19885 PF02350 UDP-N-acetylglucosamine 2-epimerase D0887_RS19890 PF02706 Chain length determinant protein D0887_RS19895 PF00953 Glycosyl transferase family 4 D0887_RS19900 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D0887_RS19900 PF07498 Rho termination factor, N-terminal domain D0887_RS19900 PF07497 Rho termination factor, RNA-binding domain D0887_RS19910 PF00085 Thioredoxin D0887_RS19915 PF00270 DEAD/DEAH box helicase D0887_RS19915 PF00271 Helicase conserved C-terminal domain D0887_RS19925 PF02541 Ppx/GppA phosphatase family D0887_RS19930 PF03466 LysR substrate binding domain D0887_RS19930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0887_RS19940 PF04474 Protein of unknown function (DUF554) D0887_RS19945 PF13361 UvrD-like helicase C-terminal domain D0887_RS19945 PF00580 UvrD/REP helicase N-terminal domain D0887_RS19960 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain D0887_RS19960 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain D0887_RS19965 PF03466 LysR substrate binding domain D0887_RS19965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0887_RS19970 PF00585 C-terminal regulatory domain of Threonine dehydratase D0887_RS19970 PF00291 Pyridoxal-phosphate dependent enzyme D0887_RS19975 PF00920 Dehydratase family D0887_RS19980 PF01063 Amino-transferase class IV D0887_RS19990 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D0887_RS19990 PF00205 Thiamine pyrophosphate enzyme, central domain D0887_RS19990 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D0887_RS19995 PF08046 IlvGEDA operon leader peptide D0887_RS20000 PF01078 Magnesium chelatase, subunit ChlI D0887_RS20000 PF13335 Magnesium chelatase, subunit ChlI C-terminal D0887_RS20005 PF04219 Protein of unknown function, DUF D0887_RS20010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0887_RS20010 PF03466 LysR substrate binding domain D0887_RS20050 PF01177 Asp/Glu/Hydantoin racemase D0887_RS20055 PF00593 TonB dependent receptor D0887_RS20055 PF07715 TonB-dependent Receptor Plug Domain D0887_RS20060 PF05958 tRNA (Uracil-5-)-methyltransferase D0887_RS20065 PF07226 Protein of unknown function (DUF1422) D0887_RS20070 PF00440 Bacterial regulatory proteins, tetR family D0887_RS20075 PF07992 Pyridine nucleotide-disulphide oxidoreductase D0887_RS20075 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D0887_RS20080 PF03466 LysR substrate binding domain D0887_RS20080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0887_RS20090 PF14698 Argininosuccinate lyase C-terminal D0887_RS20090 PF00206 Lyase D0887_RS20100 PF00696 Amino acid kinase family D0887_RS20105 PF02774 Semialdehyde dehydrogenase, dimerisation domain D0887_RS20105 PF01118 Semialdehyde dehydrogenase, NAD binding domain D0887_RS20110 PF07687 Peptidase dimerisation domain D0887_RS20110 PF01546 Peptidase family M20/M25/M40 D0887_RS20115 PF00311 Phosphoenolpyruvate carboxylase D0887_RS20120 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment D0887_RS20125 PF12833 Helix-turn-helix domain D0887_RS20130 PF00923 Transaldolase/Fructose-6-phosphate aldolase D0887_RS20135 PF00465 Iron-containing alcohol dehydrogenase D0887_RS20140 PF00892 EamA-like transporter family D0887_RS20145 PF02219 Methylenetetrahydrofolate reductase D0887_RS20150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0887_RS20150 PF03466 LysR substrate binding domain D0887_RS20155 PF02627 Carboxymuconolactone decarboxylase family D0887_RS20160 PF02872 5'-nucleotidase, C-terminal domain D0887_RS20160 PF00149 Calcineurin-like phosphoesterase D0887_RS20170 PF03447 Homoserine dehydrogenase, NAD binding domain D0887_RS20170 PF00742 Homoserine dehydrogenase D0887_RS20170 PF00696 Amino acid kinase family D0887_RS20175 PF01053 Cys/Met metabolism PLP-dependent enzyme D0887_RS20180 PF01340 Met Apo-repressor, MetJ D0887_RS20185 PF01197 Ribosomal protein L31 D0887_RS20190 PF00270 DEAD/DEAH box helicase D0887_RS20190 PF18319 PriA DNA helicase Cys-rich region (CRR) domain D0887_RS20190 PF17764 3′ DNA-binding domain (3′BD) D0887_RS20190 PF00271 Helicase conserved C-terminal domain D0887_RS20190 PF18074 Primosomal protein N C-terminal domain D0887_RS20195 PF00356 Bacterial regulatory proteins, lacI family D0887_RS20200 PF05036 Sporulation related domain D0887_RS20205 PF00227 Proteasome subunit D0887_RS20210 PF00004 ATPase family associated with various cellular activities (AAA) D0887_RS20210 PF07724 AAA domain (Cdc48 subfamily) D0887_RS20210 PF10431 C-terminal, D2-small domain, of ClpB protein D0887_RS20215 PF01040 UbiA prenyltransferase family D0887_RS20220 PF03737 Aldolase/RraA D0887_RS20225 PF00365 Phosphofructokinase D0887_RS20230 PF01545 Cation efflux family D0887_RS20230 PF16916 Dimerisation domain of Zinc Transporter D0887_RS20405 PF05840 Bacteriophage replication gene A protein (GPA) D0887_RS20450 PF00589 Phage integrase family D0887_RS20450 PF02899 Phage integrase, N-terminal SAM-like domain D0887_RS20455 PF07813 LTXXQ motif family protein D0887_RS20460 PF00072 Response regulator receiver domain D0887_RS20460 PF00486 Transcriptional regulatory protein, C terminal D0887_RS20465 PF00512 His Kinase A (phospho-acceptor) domain D0887_RS20465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0887_RS20465 PF00672 HAMP domain D0887_RS20465 PF16527 Two-component sensor protein CpxA, periplasmic domain D0887_RS20470 PF03475 3-alpha domain D0887_RS20470 PF03473 MOSC domain D0887_RS20475 PF02777 Iron/manganese superoxide dismutases, C-terminal domain D0887_RS20475 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain D0887_RS20480 PF06379 L-rhamnose-proton symport protein (RhaT) D0887_RS20485 PF12833 Helix-turn-helix domain D0887_RS20485 PF02311 AraC-like ligand binding domain D0887_RS20490 PF12833 Helix-turn-helix domain D0887_RS20490 PF02311 AraC-like ligand binding domain D0887_RS20500 PF00370 FGGY family of carbohydrate kinases, N-terminal domain D0887_RS20500 PF02782 FGGY family of carbohydrate kinases, C-terminal domain D0887_RS20505 PF06134 L-rhamnose isomerase (RhaA) D0887_RS20510 PF00596 Class II Aldolase and Adducin N-terminal domain D0887_RS20515 PF13407 Periplasmic binding protein domain D0887_RS20520 PF00005 ABC transporter D0887_RS20525 PF02653 Branched-chain amino acid transport system / permease component D0887_RS20530 PF02653 Branched-chain amino acid transport system / permease component D0887_RS20535 PF00465 Iron-containing alcohol dehydrogenase D0887_RS20540 PF05336 L-rhamnose mutarotase D0887_RS20545 PF01306 LacY proton/sugar symporter D0887_RS20550 PF16875 Glycosyl hydrolase family 36 N-terminal domain D0887_RS20550 PF16874 Glycosyl hydrolase family 36 C-terminal domain D0887_RS20555 PF00356 Bacterial regulatory proteins, lacI family D0887_RS20555 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family D0887_RS20580 PF02634 FdhD/NarQ family D0887_RS20590 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D0887_RS20590 PF01568 Molydopterin dinucleotide binding domain D0887_RS20590 PF00384 Molybdopterin oxidoreductase D0887_RS20595 PF00384 Molybdopterin oxidoreductase D0887_RS20595 PF01568 Molydopterin dinucleotide binding domain D0887_RS20595 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D0887_RS20600 PF09163 Formate dehydrogenase N, transmembrane D0887_RS20600 PF13247 4Fe-4S dicluster domain D0887_RS20605 PF01292 Prokaryotic cytochrome b561 D0887_RS20610 PF04216 Protein involved in formate dehydrogenase formation D0887_RS20625 PF07859 alpha/beta hydrolase fold D0887_RS20630 PF00583 Acetyltransferase (GNAT) family D0887_RS20630 PF09500 Putative thioesterase (yiiD_Cterm) D0887_RS20635 PF02580 D-Tyr-tRNA(Tyr) deacylase D0887_RS20640 PF03631 Virulence factor BrkB D0887_RS20645 PF13419 Haloacid dehalogenase-like hydrolase D0887_RS20650 PF00009 Elongation factor Tu GTP binding domain D0887_RS20650 PF03144 Elongation factor Tu domain 2 D0887_RS20650 PF00679 Elongation factor G C-terminus D0887_RS20660 PF00120 Glutamine synthetase, catalytic domain D0887_RS20660 PF03951 Glutamine synthetase, beta-Grasp domain D0887_RS20665 PF00512 His Kinase A (phospho-acceptor) domain D0887_RS20665 PF00989 PAS fold D0887_RS20665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0887_RS20670 PF00072 Response regulator receiver domain D0887_RS20670 PF00158 Sigma-54 interaction domain D0887_RS20670 PF02954 Bacterial regulatory protein, Fis family D0887_RS20675 PF04055 Radical SAM superfamily D0887_RS20675 PF06969 HemN C-terminal domain D0887_RS20685 PF04220 Der GTPase activator (YihI) D0887_RS20690 PF01926 50S ribosome-binding GTPase D0887_RS20695 PF01367 5'-3' exonuclease, C-terminal SAM fold D0887_RS20695 PF01612 3'-5' exonuclease D0887_RS20695 PF00476 DNA polymerase family A D0887_RS20695 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain D0887_RS20710 PF01553 Acyltransferase D0887_RS20715 PF01323 DSBA-like thioredoxin domain D0887_RS20720 PF01636 Phosphotransferase enzyme family D0887_RS20725 PF06288 Protein of unknown function (DUF1040) D0887_RS20730 PF12804 MobA-like NTP transferase domain D0887_RS20735 PF03205 Molybdopterin guanine dinucleotide synthesis protein B D0887_RS20765 PF00392 Bacterial regulatory proteins, gntR family D0887_RS20765 PF07729 FCD domain D0887_RS20770 PF07690 Major Facilitator Superfamily D0887_RS20775 PF00356 Bacterial regulatory proteins, lacI family D0887_RS20780 PF00294 pfkB family carbohydrate kinase D0887_RS20785 PF13407 Periplasmic binding protein domain D0887_RS20790 PF02653 Branched-chain amino acid transport system / permease component D0887_RS20795 PF00005 ABC transporter D0887_RS20800 PF05025 RbsD / FucU transport protein family D0887_RS20805 PF02705 K+ potassium transporter D0887_RS20810 PF17868 AAA lid domain D0887_RS20810 PF12592 Protein of unknown function (DUF3763) D0887_RS20810 PF07728 AAA domain (dynein-related subfamily) D0887_RS20815 PF05762 VWA domain containing CoxE-like protein D0887_RS20820 PF03590 Aspartate-ammonia ligase D0887_RS20825 PF01037 Lrp/AsnC ligand binding domain D0887_RS20830 PF00258 Flavodoxin D0887_RS20835 PF01134 Glucose inhibited division protein A D0887_RS20835 PF13932 GidA associated domain D0887_RS20840 PF02527 rRNA small subunit methyltransferase G D0887_RS20845 PF03899 ATP synthase I chain D0887_RS20850 PF00119 ATP synthase A chain D0887_RS20855 PF00137 ATP synthase subunit C D0887_RS20860 PF00430 ATP synthase B/B' CF(0) D0887_RS20865 PF00213 ATP synthase delta (OSCP) subunit D0887_RS20870 PF02874 ATP synthase alpha/beta family, beta-barrel domain D0887_RS20870 PF00306 ATP synthase alpha/beta chain, C terminal domain D0887_RS20870 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D0887_RS20875 PF00231 ATP synthase D0887_RS20880 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D0887_RS20880 PF02874 ATP synthase alpha/beta family, beta-barrel domain D0887_RS20885 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain D0887_RS20885 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain D0887_RS20890 PF12804 MobA-like NTP transferase domain D0887_RS20890 PF00132 Bacterial transferase hexapeptide (six repeats) D0887_RS20895 PF01380 SIS domain D0887_RS20900 PF12849 PBP superfamily domain D0887_RS20905 PF00528 Binding-protein-dependent transport system inner membrane component D0887_RS20910 PF00528 Binding-protein-dependent transport system inner membrane component D0887_RS20915 PF00005 ABC transporter D0887_RS20920 PF01895 PhoU domain D0887_RS20930 PF11471 Maltoporin periplasmic N-terminal extension D0887_RS20930 PF02264 LamB porin D0887_RS20935 PF00756 Putative esterase D0887_RS20935 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) D0887_RS20940 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase D0887_RS20945 PF13419 Haloacid dehalogenase-like hydrolase D0887_RS20955 PF00860 Permease family D0887_RS20960 PF03358 NADPH-dependent FMN reductase D0887_RS20970 PF03466 LysR substrate binding domain D0887_RS20970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0887_RS20975 PF07690 Major Facilitator Superfamily D0887_RS20985 PF01926 50S ribosome-binding GTPase D0887_RS20985 PF12631 MnmE helical domain D0887_RS20985 PF10396 GTP-binding protein TrmE N-terminus D0887_RS20995 PF14849 YidC periplasmic domain D0887_RS20995 PF02096 60Kd inner membrane protein D0887_RS21000 PF01809 Putative membrane protein insertion efficiency factor D0887_RS21005 PF00825 Ribonuclease P D0887_RS21010 PF00468 Ribosomal protein L34 D0887_RS21020 PF08299 Bacterial dnaA protein helix-turn-helix D0887_RS21020 PF00308 Bacterial dnaA protein D0887_RS21020 PF11638 DnaA N-terminal domain D0887_RS21025 PF02767 DNA polymerase III beta subunit, central domain D0887_RS21025 PF00712 DNA polymerase III beta subunit, N-terminal domain D0887_RS21025 PF02768 DNA polymerase III beta subunit, C-terminal domain D0887_RS21030 PF02463 RecF/RecN/SMC N terminal domain D0887_RS21035 PF00204 DNA gyrase B D0887_RS21035 PF00986 DNA gyrase B subunit, carboxyl terminus D0887_RS21035 PF18053 DNA gyrase B subunit insert domain D0887_RS21035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0887_RS21035 PF01751 Toprim domain D0887_RS21055 PF07729 FCD domain D0887_RS21055 PF00392 Bacterial regulatory proteins, gntR family D0887_RS21060 PF05035 2-keto-3-deoxy-galactonokinase D0887_RS21065 PF01081 KDPG and KHG aldolase D0887_RS21070 PF13378 Enolase C-terminal domain-like D0887_RS21070 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain D0887_RS21075 PF07690 Major Facilitator Superfamily D0887_RS21080 PF07676 WD40-like Beta Propeller Repeat D0887_RS21080 PF12566 Protein of unknown function (DUF3748) D0887_RS21085 PF07119 Protein of unknown function (DUF1375) D0887_RS21090 PF00011 Hsp20/alpha crystallin family D0887_RS21095 PF00011 Hsp20/alpha crystallin family D0887_RS21105 PF06826 Predicted Permease Membrane Region D0887_RS21105 PF02080 TrkA-C domain D0887_RS21110 PF00392 Bacterial regulatory proteins, gntR family D0887_RS21110 PF07702 UTRA domain D0887_RS21115 PF02378 Phosphotransferase system, EIIC D0887_RS21115 PF00367 phosphotransferase system, EIIB D0887_RS21120 PF11975 Family 4 glycosyl hydrolase C-terminal domain D0887_RS21120 PF02056 Family 4 glycosyl hydrolase D0887_RS21125 PF02656 Domain of unknown function (DUF202) D0887_RS21130 PF02656 Domain of unknown function (DUF202) D0887_RS21140 PF00291 Pyridoxal-phosphate dependent enzyme D0887_RS21145 PF02447 GntP family permease D0887_RS21150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0887_RS21150 PF03466 LysR substrate binding domain D0887_RS21155 PF07690 Major Facilitator Superfamily D0887_RS21180 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D0887_RS21180 PF00205 Thiamine pyrophosphate enzyme, central domain D0887_RS21180 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D0887_RS21185 PF01842 ACT domain D0887_RS21190 PF00072 Response regulator receiver domain D0887_RS21190 PF00196 Bacterial regulatory proteins, luxR family D0887_RS21195 PF05231 MASE1 D0887_RS21195 PF07730 Histidine kinase D0887_RS21195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0887_RS21200 PF07690 Major Facilitator Superfamily D0887_RS21205 PF07690 Major Facilitator Superfamily D0887_RS21210 PF06711 Protein of unknown function (DUF1198) D0887_RS21225 PF07690 Major Facilitator Superfamily D0887_RS21235 PF00266 Aminotransferase class-V D0887_RS21245 PF00392 Bacterial regulatory proteins, gntR family D0887_RS21245 PF07702 UTRA domain D0887_RS21250 PF01547 Bacterial extracellular solute-binding protein D0887_RS21255 PF00005 ABC transporter D0887_RS21255 PF08402 TOBE domain D0887_RS21260 PF00528 Binding-protein-dependent transport system inner membrane component D0887_RS21265 PF00528 Binding-protein-dependent transport system inner membrane component D0887_RS21270 PF02264 LamB porin D0887_RS21275 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit D0887_RS21280 PF02378 Phosphotransferase system, EIIC D0887_RS21280 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit D0887_RS21285 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit D0887_RS21290 PF00356 Bacterial regulatory proteins, lacI family D0887_RS21295 PF07690 Major Facilitator Superfamily D0887_RS21300 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit D0887_RS21300 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase D0887_RS21305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0887_RS21305 PF03466 LysR substrate binding domain D0887_RS21310 PF02585 GlcNAc-PI de-N-acetylase D0887_RS21315 PF03737 Aldolase/RraA D0887_RS21320 PF04303 PrpF protein D0887_RS21335 PF00892 EamA-like transporter family D0887_RS21340 PF02378 Phosphotransferase system, EIIC D0887_RS21340 PF00367 phosphotransferase system, EIIB D0887_RS21345 PF13580 SIS domain D0887_RS21350 PF07690 Major Facilitator Superfamily D0887_RS21355 PF02321 Outer membrane efflux protein D0887_RS21365 PF00529 HlyD membrane-fusion protein of T1SS D0887_RS21365 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D0887_RS21375 PF00583 Acetyltransferase (GNAT) family D0887_RS21385 PF00440 Bacterial regulatory proteins, tetR family D0887_RS21390 PF07690 Major Facilitator Superfamily D0887_RS21395 PF03466 LysR substrate binding domain D0887_RS21395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0887_RS21420 PF03180 NLPA lipoprotein D0887_RS21430 PF00293 NUDIX domain D0887_RS21435 PF12706 Beta-lactamase superfamily domain D0887_RS21440 PF01965 DJ-1/PfpI family D0887_RS21445 PF08240 Alcohol dehydrogenase GroES-like domain D0887_RS21445 PF00107 Zinc-binding dehydrogenase D0887_RS21460 PF00107 Zinc-binding dehydrogenase D0887_RS21460 PF08240 Alcohol dehydrogenase GroES-like domain D0887_RS21480 PF17345 Family of unknown function (DUF5375) D0887_RS21505 PF04606 Ogr/Delta-like zinc finger D0887_RS21530 PF00589 Phage integrase family D0887_RS21530 PF14659 Phage integrase, N-terminal SAM-like domain D0887_RS21530 PF13356 Arm DNA-binding domain D0887_RS21545 PF13802 Galactose mutarotase-like D0887_RS21545 PF01055 Glycosyl hydrolases family 31 D0887_RS21555 PF02056 Family 4 glycosyl hydrolase D0887_RS21555 PF11975 Family 4 glycosyl hydrolase C-terminal domain D0887_RS21560 PF00367 phosphotransferase system, EIIB D0887_RS21560 PF02378 Phosphotransferase system, EIIC D0887_RS21565 PF05170 AsmA family D0887_RS21570 PF00860 Permease family D0887_RS21575 PF03616 Sodium/glutamate symporter D0887_RS21580 PF02782 FGGY family of carbohydrate kinases, C-terminal domain D0887_RS21580 PF00370 FGGY family of carbohydrate kinases, N-terminal domain D0887_RS21585 PF00230 Major intrinsic protein D0887_RS21590 PF06005 Cell division protein ZapB D0887_RS21600 PF02611 CDP-diacylglycerol pyrophosphatase D0887_RS21610 PF00121 Triosephosphate isomerase D0887_RS21615 PF07305 Protein of unknown function (DUF1454) D0887_RS21620 PF05656 Protein of unknown function (DUF805) D0887_RS21625 PF00970 Oxidoreductase FAD-binding domain D0887_RS21625 PF00175 Oxidoreductase NAD-binding domain D0887_RS21630 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded D0887_RS21635 PF17191 RecG wedge domain D0887_RS21635 PF00270 DEAD/DEAH box helicase D0887_RS21635 PF00271 Helicase conserved C-terminal domain D0887_RS21640 PF12105 SpoU, rRNA methylase, C-terminal D0887_RS21640 PF00588 SpoU rRNA Methylase family D0887_RS21645 PF04607 Region found in RelA / SpoT proteins D0887_RS21645 PF13291 ACT domain D0887_RS21645 PF02824 TGS domain D0887_RS21650 PF01192 RNA polymerase Rpb6 D0887_RS21655 PF00625 Guanylate kinase D0887_RS21660 PF03120 NAD-dependent DNA ligase OB-fold domain D0887_RS21660 PF01653 NAD-dependent DNA ligase adenylation domain D0887_RS21665 PF03458 UPF0126 domain D0887_RS21675 PF12833 Helix-turn-helix domain D0887_RS21675 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain D0887_RS21675 PF02805 Metal binding domain of Ada D0887_RS21675 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain D0887_RS21685 PF08340 Domain of unknown function (DUF1732) D0887_RS21685 PF03755 YicC-like family, N-terminal region D0887_RS21705 PF00005 ABC transporter D0887_RS21715 PF03725 3' exoribonuclease family, domain 2 D0887_RS21715 PF01138 3' exoribonuclease family, domain 1 D0887_RS21720 PF00156 Phosphoribosyl transferase domain D0887_RS21725 PF00440 Bacterial regulatory proteins, tetR family D0887_RS21730 PF00692 dUTPase D0887_RS21735 PF04127 DNA / pantothenate metabolism flavoprotein D0887_RS21735 PF02441 Flavoprotein D0887_RS21740 PF04002 RadC-like JAB domain D0887_RS21745 PF00830 Ribosomal L28 family D0887_RS21750 PF00471 Ribosomal protein L33 D0887_RS21755 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain D0887_RS21755 PF06827 Zinc finger found in FPG and IleRS D0887_RS21755 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain D0887_RS21760 PF01467 Cytidylyltransferase-like D0887_RS21765 PF00535 Glycosyl transferase family 2 D0887_RS21770 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) D0887_RS21775 PF00535 Glycosyl transferase family 2 D0887_RS21780 PF00534 Glycosyl transferases group 1 D0887_RS21780 PF13439 Glycosyltransferase Family 4 D0887_RS21785 PF13439 Glycosyltransferase Family 4 D0887_RS21785 PF00534 Glycosyl transferases group 1 D0887_RS21790 PF01075 Glycosyltransferase family 9 (heptosyltransferase) D0887_RS21805 PF04932 O-Antigen ligase D0887_RS21815 PF01075 Glycosyltransferase family 9 (heptosyltransferase) D0887_RS21820 PF01075 Glycosyltransferase family 9 (heptosyltransferase) D0887_RS21825 PF01370 NAD dependent epimerase/dehydratase family D0887_RS21830 PF00155 Aminotransferase class I and II D0887_RS21835 PF00107 Zinc-binding dehydrogenase D0887_RS21835 PF08240 Alcohol dehydrogenase GroES-like domain D0887_RS21840 PF00535 Glycosyl transferase family 2 D0887_RS21845 PF04748 Divergent polysaccharide deacetylase D0887_RS21850 PF01551 Peptidase family M23 D0887_RS21855 PF06415 BPG-independent PGAM N-terminus (iPGM_N) D0887_RS21855 PF01676 Metalloenzyme superfamily D0887_RS21860 PF00581 Rhodanese-like domain D0887_RS21865 PF00462 Glutaredoxin D0887_RS21870 PF02556 Preprotein translocase subunit SecB D0887_RS21875 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus D0887_RS21875 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus D0887_RS21880 PF00132 Bacterial transferase hexapeptide (six repeats) D0887_RS21880 PF06426 Serine acetyltransferase, N-terminal D0887_RS21885 PF00588 SpoU rRNA Methylase family D0887_RS21890 PF01070 FMN-dependent dehydrogenase D0887_RS21895 PF00392 Bacterial regulatory proteins, gntR family D0887_RS21895 PF07729 FCD domain D0887_RS21900 PF02652 L-lactate permease D0887_RS21905 PF10928 Protein of unknown function (DUF2810) D0887_RS21915 PF05068 Mannitol repressor D0887_RS21920 PF08125 Mannitol dehydrogenase C-terminal domain D0887_RS21920 PF01232 Mannitol dehydrogenase Rossmann domain D0887_RS21925 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D0887_RS21925 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit D0887_RS21925 PF02378 Phosphotransferase system, EIIC D0887_RS21935 PF13417 Glutathione S-transferase, N-terminal domain D0887_RS21935 PF00043 Glutathione S-transferase, C-terminal domain D0887_RS21940 PF12390 Selenocysteine synthase N terminal D0887_RS21940 PF03841 L-seryl-tRNA selenium transferase D0887_RS21945 PF03144 Elongation factor Tu domain 2 D0887_RS21945 PF09106 Elongation factor SelB, winged helix D0887_RS21945 PF00009 Elongation factor Tu GTP binding domain D0887_RS21945 PF09107 Elongation factor SelB, winged helix D0887_RS21950 PF01614 Bacterial transcriptional regulator D0887_RS21950 PF09339 IclR helix-turn-helix domain D0887_RS21955 PF13247 4Fe-4S dicluster domain D0887_RS21955 PF12800 4Fe-4S binding domain D0887_RS21960 PF00155 Aminotransferase class I and II D0887_RS21965 PF00128 Alpha amylase, catalytic domain D0887_RS21975 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase D0887_RS21980 PF12833 Helix-turn-helix domain D0887_RS21985 PF02653 Branched-chain amino acid transport system / permease component D0887_RS21990 PF00005 ABC transporter D0887_RS21995 PF13407 Periplasmic binding protein domain D0887_RS22010 PF02782 FGGY family of carbohydrate kinases, C-terminal domain D0887_RS22010 PF00370 FGGY family of carbohydrate kinases, N-terminal domain D0887_RS22015 PF05360 yiaA/B two helix domain D0887_RS22020 PF05360 yiaA/B two helix domain D0887_RS22025 PF01757 Acyltransferase family D0887_RS22030 PF13983 YsaB-like lipoprotein D0887_RS22040 PF02091 Glycyl-tRNA synthetase alpha subunit D0887_RS22045 PF05746 DALR anticodon binding domain D0887_RS22045 PF02092 Glycyl-tRNA synthetase beta subunit D0887_RS22055 PF01848 Hok/gef family D0887_RS22060 PF12848 ABC transporter D0887_RS22060 PF00005 ABC transporter D0887_RS22065 PF00313 'Cold-shock' DNA-binding domain D0887_RS22070 PF01381 Helix-turn-helix D0887_RS22075 PF07690 Major Facilitator Superfamily D0887_RS22085 PF11254 Protein of unknown function (DUF3053) D0887_RS22090 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D0887_RS22090 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D0887_RS22095 PF07690 Major Facilitator Superfamily D0887_RS22100 PF00294 pfkB family carbohydrate kinase D0887_RS22110 PF00356 Bacterial regulatory proteins, lacI family D0887_RS22115 PF00691 OmpA family D0887_RS22115 PF13488 Glycine zipper D0887_RS22120 PF00384 Molybdopterin oxidoreductase D0887_RS22120 PF18364 Molybdopterin oxidoreductase N-terminal domain D0887_RS22120 PF01568 Molydopterin dinucleotide binding domain D0887_RS22125 PF00583 Acetyltransferase (GNAT) family D0887_RS22130 PF03352 Methyladenine glycosylase D0887_RS22135 PF03797 Autotransporter beta-domain D0887_RS22140 PF07690 Major Facilitator Superfamily D0887_RS22145 PF08019 Phosphoethanolamine transferase EptA/EptB D0887_RS22145 PF00884 Sulfatase D0887_RS22180 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D0887_RS22185 PF00528 Binding-protein-dependent transport system inner membrane component D0887_RS22190 PF00528 Binding-protein-dependent transport system inner membrane component D0887_RS22190 PF12911 N-terminal TM domain of oligopeptide transport permease C D0887_RS22195 PF00005 ABC transporter D0887_RS22195 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D0887_RS22200 PF00005 ABC transporter D0887_RS22200 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D0887_RS22215 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain D0887_RS22220 PF03170 Bacterial cellulose synthase subunit D0887_RS22220 PF03552 Cellulose synthase D0887_RS22220 PF07238 PilZ domain D0887_RS22220 PF00535 Glycosyl transferase family 2 D0887_RS22225 PF03170 Bacterial cellulose synthase subunit D0887_RS22230 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) D0887_RS22240 PF01270 Glycosyl hydrolases family 8 D0887_RS22245 PF11658 Cellulose biosynthesis protein BcsG D0887_RS22250 PF11120 Cellulose biosynthesis protein BcsF D0887_RS22255 PF10995 Cellulose biosynthesis GIL D0887_RS22260 PF10945 Cellulose biosynthesis protein BcsR D0887_RS22265 PF06564 Cellulose biosynthesis protein BcsQ D0887_RS22270 PF07238 PilZ domain D0887_RS22270 PF00535 Glycosyl transferase family 2 D0887_RS22275 PF03170 Bacterial cellulose synthase subunit D0887_RS22280 PF01270 Glycosyl hydrolases family 8 D0887_RS22285 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) D0887_RS22290 PF17154 Gammaproteobacterial periplasmic sensor domain D0887_RS22290 PF00672 HAMP domain D0887_RS22290 PF00563 EAL domain D0887_RS22290 PF00990 Diguanylate cyclase, GGDEF domain D0887_RS22300 PF00375 Sodium:dicarboxylate symporter family D0887_RS22305 PF00675 Insulinase (Peptidase family M16) D0887_RS22305 PF05193 Peptidase M16 inactive domain D0887_RS22310 PF00294 pfkB family carbohydrate kinase D0887_RS22320 PF05170 AsmA family D0887_RS22325 PF00083 Sugar (and other) transporter D0887_RS22325 PF07690 Major Facilitator Superfamily D0887_RS22330 PF03631 Virulence factor BrkB D0887_RS22335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0887_RS22335 PF03466 LysR substrate binding domain D0887_RS22345 PF13302 Acetyltransferase (GNAT) domain D0887_RS22350 PF01204 Trehalase D0887_RS22355 PF00465 Iron-containing alcohol dehydrogenase D0887_RS22365 PF07992 Pyridine nucleotide-disulphide oxidoreductase D0887_RS22365 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D0887_RS22370 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ D0887_RS22375 PF01569 PAP2 superfamily D0887_RS22380 PF01432 Peptidase family M3 D0887_RS22385 PF04445 Putative SAM-dependent methyltransferase D0887_RS22390 PF00854 POT family D0887_RS22395 PF00582 Universal stress protein family D0887_RS22400 PF10625 Universal stress protein B (UspB) D0887_RS22405 PF01384 Phosphate transporter family D0887_RS22415 PF03448 MgtE intracellular N domain D0887_RS22415 PF01769 Divalent cation transporter D0887_RS22415 PF00571 CBS domain D0887_RS22425 PF01402 Ribbon-helix-helix protein, copG family D0887_RS22425 PF08753 NikR C terminal nickel binding domain D0887_RS22430 PF00005 ABC transporter D0887_RS22435 PF00005 ABC transporter D0887_RS22440 PF00528 Binding-protein-dependent transport system inner membrane component D0887_RS22445 PF00528 Binding-protein-dependent transport system inner membrane component D0887_RS22450 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D0887_RS22460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0887_RS22460 PF03466 LysR substrate binding domain D0887_RS22465 PF05870 Phenolic acid decarboxylase (PAD) D0887_RS22470 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family D0887_RS22475 PF00535 Glycosyl transferase family 2 D0887_RS22480 PF02911 Formyl transferase, C-terminal domain D0887_RS22480 PF00551 Formyl transferase D0887_RS22480 PF01370 NAD dependent epimerase/dehydratase family D0887_RS22485 PF01522 Polysaccharide deacetylase D0887_RS22490 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase D0887_RS22495 PF00892 EamA-like transporter family D0887_RS22505 PF01594 AI-2E family transporter D0887_RS22510 PF07690 Major Facilitator Superfamily D0887_RS22515 PF08786 DcrB D0887_RS22520 PF02592 Putative vitamin uptake transporter D0887_RS22525 PF01206 Sulfurtransferase TusA D0887_RS22530 PF00403 Heavy-metal-associated domain D0887_RS22535 PF07947 YhhN family D0887_RS22540 PF10694 Protein of unknown function (DUF2500) D0887_RS22545 PF06611 Protein of unknown function (DUF1145) D0887_RS22555 PF02881 SRP54-type protein, helical bundle domain D0887_RS22555 PF00448 SRP54-type protein, GTPase domain D0887_RS22560 PF00005 ABC transporter D0887_RS22565 PF02687 FtsX-like permease family D0887_RS22565 PF18075 FtsX extracellular domain D0887_RS22570 PF04542 Sigma-70 region 2 D0887_RS22570 PF04545 Sigma-70, region 4 D0887_RS22575 PF00155 Aminotransferase class I and II D0887_RS22575 PF00392 Bacterial regulatory proteins, gntR family D0887_RS22580 PF00202 Aminotransferase class-III D0887_RS22585 PF02371 Transposase IS116/IS110/IS902 family D0887_RS22585 PF01548 Transposase D0887_RS22595 PF13458 Periplasmic binding protein D0887_RS22600 PF12568 Acetyltransferase (GNAT) domain, PanZ D0887_RS22610 PF13458 Periplasmic binding protein D0887_RS22615 PF02653 Branched-chain amino acid transport system / permease component D0887_RS22620 PF02653 Branched-chain amino acid transport system / permease component D0887_RS22620 PF11862 Domain of unknown function (DUF3382) D0887_RS22625 PF12399 Branched-chain amino acid ATP-binding cassette transporter D0887_RS22625 PF00005 ABC transporter D0887_RS22630 PF00005 ABC transporter D0887_RS22635 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system D0887_RS22645 PF13416 Bacterial extracellular solute-binding protein D0887_RS22650 PF00528 Binding-protein-dependent transport system inner membrane component D0887_RS22655 PF00528 Binding-protein-dependent transport system inner membrane component D0887_RS22660 PF00005 ABC transporter D0887_RS22660 PF17912 MalK OB fold domain D0887_RS22665 PF03009 Glycerophosphoryl diester phosphodiesterase family D0887_RS22670 PF10956 Protein of unknown function (DUF2756) D0887_RS22680 PF00583 Acetyltransferase (GNAT) family D0887_RS22690 PF02894 Oxidoreductase family, C-terminal alpha/beta domain D0887_RS22690 PF01408 Oxidoreductase family, NAD-binding Rossmann fold D0887_RS22695 PF17954 Quercetinase C-terminal cupin domain D0887_RS22695 PF02678 Pirin D0887_RS22700 PF00356 Bacterial regulatory proteins, lacI family D0887_RS22700 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family D0887_RS22705 PF01202 Shikimate kinase D0887_RS22710 PF02447 GntP family permease D0887_RS22720 PF02774 Semialdehyde dehydrogenase, dimerisation domain D0887_RS22720 PF01118 Semialdehyde dehydrogenase, NAD binding domain D0887_RS22725 PF00128 Alpha amylase, catalytic domain D0887_RS22725 PF02806 Alpha amylase, C-terminal all-beta domain D0887_RS22725 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) D0887_RS22730 PF00128 Alpha amylase, catalytic domain D0887_RS22730 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) D0887_RS22730 PF18390 Glycogen debranching enzyme C-terminal domain D0887_RS22735 PF00483 Nucleotidyl transferase D0887_RS22740 PF08323 Starch synthase catalytic domain D0887_RS22740 PF00534 Glycosyl transferases group 1 D0887_RS22745 PF00343 Carbohydrate phosphorylase D0887_RS22750 PF16901 C-terminal domain of alpha-glycerophosphate oxidase D0887_RS22750 PF01266 FAD dependent oxidoreductase D0887_RS22755 PF00581 Rhodanese-like domain D0887_RS22760 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease D0887_RS22760 PF01694 Rhomboid family D0887_RS22765 PF08220 DeoR-like helix-turn-helix domain D0887_RS22765 PF00455 DeoR C terminal sensor domain D0887_RS22780 PF00343 Carbohydrate phosphorylase D0887_RS22785 PF02446 4-alpha-glucanotransferase D0887_RS22790 PF02447 GntP family permease D0887_RS22795 PF01521 Iron-sulphur cluster biosynthesis D0887_RS22795 PF01106 NifU-like domain D0887_RS22800 PF00156 Phosphoribosyl transferase domain D0887_RS22805 PF00561 alpha/beta hydrolase fold D0887_RS22815 PF09012 FeoC like transcriptional regulator D0887_RS22820 PF07670 Nucleoside recognition D0887_RS22820 PF02421 Ferrous iron transport protein B D0887_RS22820 PF17910 FeoB cytosolic helical domain D0887_RS22820 PF07664 Ferrous iron transport protein B C terminus D0887_RS22825 PF04023 FeoA domain D0887_RS22830 PF00575 S1 RNA binding domain D0887_RS22830 PF09371 Tex-like protein N-terminal domain D0887_RS22830 PF17674 HHH domain D0887_RS22830 PF16921 Tex protein YqgF-like domain D0887_RS22835 PF01272 Transcription elongation factor, GreA/GreB, C-term D0887_RS22835 PF03449 Transcription elongation factor, N-terminal D0887_RS22840 PF00072 Response regulator receiver domain D0887_RS22840 PF00486 Transcriptional regulatory protein, C terminal D0887_RS22845 PF00672 HAMP domain D0887_RS22845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0887_RS22845 PF00512 His Kinase A (phospho-acceptor) domain D0887_RS22850 PF01293 Phosphoenolpyruvate carboxykinase D0887_RS22855 PF01430 Hsp33 protein D0887_RS22860 PF01479 S4 domain D0887_RS22865 PF13419 Haloacid dehalogenase-like hydrolase D0887_RS22870 PF07095 Intracellular growth attenuator protein IgaA D0887_RS22875 PF00293 NUDIX domain D0887_RS22880 PF00905 Penicillin binding protein transpeptidase domain D0887_RS22880 PF00912 Transglycosylase D0887_RS22880 PF17092 Penicillin-binding protein OB-like domain D0887_RS22905 PF03958 Bacterial type II/III secretion system short domain D0887_RS22905 PF00263 Bacterial type II and III secretion system protein D0887_RS22915 PF01202 Shikimate kinase D0887_RS22920 PF01761 3-dehydroquinate synthase D0887_RS22925 PF05036 Sporulation related domain D0887_RS22930 PF02086 D12 class N6 adenine-specific DNA methyltransferase D0887_RS22935 PF00834 Ribulose-phosphate 3 epimerase family D0887_RS22940 PF13419 Haloacid dehalogenase-like hydrolase D0887_RS22945 PF00579 tRNA synthetases class I (W and Y) D0887_RS22950 PF14824 Sirohaem biosynthesis protein central D0887_RS22950 PF10414 Sirohaem synthase dimerisation region D0887_RS22950 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D0887_RS22955 PF13806 Rieske-like [2Fe-2S] domain D0887_RS22960 PF07992 Pyridine nucleotide-disulphide oxidoreductase D0887_RS22960 PF04324 BFD-like [2Fe-2S] binding domain D0887_RS22960 PF01077 Nitrite and sulphite reductase 4Fe-4S domain D0887_RS22960 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain D0887_RS22960 PF18267 Rubredoxin NAD+ reductase C-terminal domain D0887_RS22965 PF07969 Amidohydrolase family D0887_RS22970 PF07690 Major Facilitator Superfamily D0887_RS22975 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD D0887_RS22980 PF10832 Protein of unknown function (DUF2559) D0887_RS22985 PF02661 Fic/DOC family D0887_RS22990 PF00117 Glutamine amidotransferase class-I D0887_RS22995 PF00202 Aminotransferase class-III D0887_RS23000 PF12805 FUSC-like inner membrane protein yccS D0887_RS23005 PF00027 Cyclic nucleotide-binding domain D0887_RS23005 PF13545 Crp-like helix-turn-helix domain D0887_RS23015 PF02566 OsmC-like protein D0887_RS23020 PF00485 Phosphoribulokinase / Uridine kinase family D0887_RS23025 PF06794 Uncharacterised protein family (UPF0270) D0887_RS23030 PF00561 alpha/beta hydrolase fold D0887_RS23040 PF00005 ABC transporter D0887_RS23040 PF12848 ABC transporter D0887_RS23050 PF02525 Flavodoxin-like fold D0887_RS23055 PF02254 TrkA-N domain D0887_RS23055 PF00999 Sodium/hydrogen exchanger family D0887_RS23060 PF09526 Probable metal-binding protein (DUF2387) D0887_RS23065 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D0887_RS23070 PF04102 SlyX D0887_RS23075 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase D0887_RS23075 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D0887_RS23080 PF13309 HTH domain D0887_RS23080 PF08348 YheO-like PAS domain D0887_RS23085 PF02635 DsrE/DsrF-like family D0887_RS23090 PF02635 DsrE/DsrF-like family D0887_RS23095 PF04077 DsrH like protein D0887_RS23100 PF00164 Ribosomal protein S12/S23 D0887_RS23105 PF00177 Ribosomal protein S7p/S5e D0887_RS23110 PF00009 Elongation factor Tu GTP binding domain D0887_RS23110 PF03764 Elongation factor G, domain IV D0887_RS23110 PF14492 Elongation Factor G, domain II D0887_RS23110 PF00679 Elongation factor G C-terminus D0887_RS23110 PF03144 Elongation factor Tu domain 2 D0887_RS23115 PF00009 Elongation factor Tu GTP binding domain D0887_RS23115 PF03143 Elongation factor Tu C-terminal domain D0887_RS23115 PF03144 Elongation factor Tu domain 2 D0887_RS23125 PF04324 BFD-like [2Fe-2S] binding domain D0887_RS23130 PF00210 Ferritin-like domain D0887_RS23135 PF01478 Type IV leader peptidase family D0887_RS23140 PF00338 Ribosomal protein S10p/S20e D0887_RS23145 PF00297 Ribosomal protein L3 D0887_RS23150 PF00573 Ribosomal protein L4/L1 family D0887_RS23155 PF00276 Ribosomal protein L23 D0887_RS23160 PF03947 Ribosomal Proteins L2, C-terminal domain D0887_RS23160 PF00181 Ribosomal Proteins L2, RNA binding domain D0887_RS23165 PF00203 Ribosomal protein S19 D0887_RS23170 PF00237 Ribosomal protein L22p/L17e D0887_RS23175 PF00189 Ribosomal protein S3, C-terminal domain D0887_RS23175 PF07650 KH domain D0887_RS23180 PF00252 Ribosomal protein L16p/L10e D0887_RS23185 PF00831 Ribosomal L29 protein D0887_RS23190 PF00366 Ribosomal protein S17 D0887_RS23195 PF00238 Ribosomal protein L14p/L23e D0887_RS23200 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 D0887_RS23200 PF00467 KOW motif D0887_RS23205 PF00281 Ribosomal protein L5 D0887_RS23205 PF00673 ribosomal L5P family C-terminus D0887_RS23210 PF00253 Ribosomal protein S14p/S29e D0887_RS23215 PF00410 Ribosomal protein S8 D0887_RS23220 PF00347 Ribosomal protein L6 D0887_RS23225 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast D0887_RS23230 PF00333 Ribosomal protein S5, N-terminal domain D0887_RS23230 PF03719 Ribosomal protein S5, C-terminal domain D0887_RS23235 PF00327 Ribosomal protein L30p/L7e D0887_RS23240 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A D0887_RS23245 PF00344 SecY translocase D0887_RS23250 PF00444 Ribosomal protein L36 D0887_RS23255 PF00416 Ribosomal protein S13/S18 D0887_RS23260 PF00411 Ribosomal protein S11 D0887_RS23265 PF00163 Ribosomal protein S4/S9 N-terminal domain D0887_RS23265 PF01479 S4 domain D0887_RS23270 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain D0887_RS23270 PF01000 RNA polymerase Rpb3/RpoA insert domain D0887_RS23270 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain D0887_RS23275 PF01196 Ribosomal protein L17 D0887_RS23280 PF09350 Domain of unknown function (DUF1992) D0887_RS23285 PF13411 MerR HTH family regulatory protein D0887_RS23290 PF03889 Alternative ribosome-rescue factor A D0887_RS23295 PF01741 Large-conductance mechanosensitive channel, MscL D0887_RS23300 PF02254 TrkA-N domain D0887_RS23300 PF02080 TrkA-C domain D0887_RS23305 PF01029 NusB family D0887_RS23305 PF01189 16S rRNA methyltransferase RsmB/F D0887_RS23310 PF00551 Formyl transferase D0887_RS23310 PF02911 Formyl transferase, C-terminal domain D0887_RS23315 PF01327 Polypeptide deformylase D0887_RS23320 PF02481 DNA recombination-mediator protein A D0887_RS23320 PF17782 DprA winged helix domain D0887_RS23325 PF04361 Protein of unknown function (DUF494) D0887_RS23330 PF01396 Topoisomerase DNA binding C4 zinc finger D0887_RS23335 PF01300 Telomere recombination D0887_RS23340 PF08501 Shikimate dehydrogenase substrate binding domain D0887_RS23340 PF01488 Shikimate / quinate 5-dehydrogenase D0887_RS23340 PF18317 Shikimate 5'-dehydrogenase C-terminal domain D0887_RS23345 PF07369 Protein of unknown function (DUF1488) D0887_RS23350 PF00132 Bacterial transferase hexapeptide (six repeats) D0887_RS23390 PF00873 AcrB/AcrD/AcrF family D0887_RS23395 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D0887_RS23395 PF00529 HlyD membrane-fusion protein of T1SS D0887_RS23400 PF08361 MAATS-type transcriptional repressor, C-terminal region D0887_RS23400 PF00440 Bacterial regulatory proteins, tetR family D0887_RS23405 PF02954 Bacterial regulatory protein, Fis family D0887_RS23410 PF01207 Dihydrouridine synthase (Dus) D0887_RS23425 PF00474 Sodium:solute symporter family D0887_RS23430 PF06196 Protein of unknown function (DUF997) D0887_RS23435 PF02785 Biotin carboxylase C-terminal domain D0887_RS23435 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain D0887_RS23435 PF00289 Biotin carboxylase, N-terminal domain D0887_RS23440 PF00364 Biotin-requiring enzyme D0887_RS23450 PF01220 Dehydroquinase class II D0887_RS23455 PF01794 Ferric reductase like transmembrane component D0887_RS23460 PF00174 Oxidoreductase molybdopterin binding domain D0887_RS23470 PF00990 Diguanylate cyclase, GGDEF domain D0887_RS23470 PF00563 EAL domain D0887_RS23470 PF17157 Gammaproteobacterial periplasmic sensor domain D0887_RS23485 PF04085 rod shape-determining protein MreC D0887_RS23490 PF04093 rod shape-determining protein MreD D0887_RS23495 PF02545 Maf-like protein D0887_RS23500 PF00575 S1 RNA binding domain D0887_RS23500 PF10150 Ribonuclease E/G family D0887_RS23505 PF13116 Protein of unknown function D0887_RS23505 PF13502 AsmA-like C-terminal region D0887_RS23510 PF01523 Putative modulator of DNA gyrase D0887_RS23515 PF03466 LysR substrate binding domain D0887_RS23515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0887_RS23520 PF07869 Protein of unknown function (DUF1656) D0887_RS23525 PF13533 Biotin-lipoyl like D0887_RS23530 PF04632 Fusaric acid resistance protein family D0887_RS23535 PF01337 Barstar (barnase inhibitor) D0887_RS23540 PF07338 Protein of unknown function (DUF1471) D0887_RS23545 PF07338 Protein of unknown function (DUF1471) D0887_RS23550 PF01316 Arginine repressor, DNA binding domain D0887_RS23550 PF02863 Arginine repressor, C-terminal domain D0887_RS23555 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain D0887_RS23555 PF00056 lactate/malate dehydrogenase, NAD binding domain D0887_RS23560 PF13180 PDZ domain D0887_RS23565 PF13180 PDZ domain D0887_RS23565 PF00595 PDZ domain D0887_RS23570 PF06295 Protein of unknown function (DUF1043) D0887_RS23575 PF03969 AFG1-like ATPase D0887_RS23580 PF00572 Ribosomal protein L13 D0887_RS23585 PF00380 Ribosomal protein S9/S16 D0887_RS23595 PF02798 Glutathione S-transferase, N-terminal domain D0887_RS23595 PF00043 Glutathione S-transferase, C-terminal domain D0887_RS23600 PF04386 Stringent starvation protein B D0887_RS23605 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase D0887_RS23610 PF07992 Pyridine nucleotide-disulphide oxidoreductase D0887_RS23610 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster D0887_RS23615 PF04898 Glutamate synthase central domain D0887_RS23615 PF01645 Conserved region in glutamate synthase D0887_RS23615 PF00310 Glutamine amidotransferases class-II D0887_RS23615 PF01493 GXGXG motif D0887_RS23625 PF04055 Radical SAM superfamily D0887_RS23625 PF16199 Radical_SAM C-terminal domain D0887_RS23630 PF07690 Major Facilitator Superfamily D0887_RS23635 PF08240 Alcohol dehydrogenase GroES-like domain D0887_RS23635 PF00107 Zinc-binding dehydrogenase D0887_RS23640 PF03786 D-mannonate dehydratase (UxuA) D0887_RS23645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0887_RS23645 PF18415 Histidine kinase receptor ArcB trans-membrane domain D0887_RS23645 PF01627 Hpt domain D0887_RS23645 PF00989 PAS fold D0887_RS23645 PF00072 Response regulator receiver domain D0887_RS23645 PF00512 His Kinase A (phospho-acceptor) domain D0887_RS23655 PF00912 Transglycosylase D0887_RS23660 PF00381 PTS HPr component phosphorylation site D0887_RS23665 PF03668 P-loop ATPase protein family D0887_RS23670 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D0887_RS23675 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein D0887_RS23680 PF04552 Sigma-54, DNA binding domain D0887_RS23680 PF04963 Sigma-54 factor, core binding domain D0887_RS23680 PF00309 Sigma-54 factor, Activator interacting domain (AID) D0887_RS23685 PF12399 Branched-chain amino acid ATP-binding cassette transporter D0887_RS23685 PF00005 ABC transporter D0887_RS23690 PF03968 OstA-like protein D0887_RS23695 PF06835 Lipopolysaccharide-assembly, LptC-related D0887_RS23705 PF00571 CBS domain D0887_RS23705 PF01380 SIS domain D0887_RS23710 PF01699 Sodium/calcium exchanger protein D0887_RS23720 PF00005 ABC transporter D0887_RS23725 PF02405 Permease MlaE D0887_RS23730 PF02470 MlaD protein D0887_RS23735 PF05494 MlaC protein D0887_RS23740 PF13466 STAS domain D0887_RS23745 PF01722 BolA-like protein D0887_RS23750 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) D0887_RS23755 PF13693 Winged helix-turn-helix DNA-binding D0887_RS23760 PF00348 Polyprenyl synthetase D0887_RS23765 PF00829 Ribosomal prokaryotic L21 protein D0887_RS23770 PF01016 Ribosomal L27 protein D0887_RS23775 PF00892 EamA-like transporter family D0887_RS23780 PF01018 GTP1/OBG D0887_RS23780 PF01926 50S ribosome-binding GTPase D0887_RS23785 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family D0887_RS23790 PF03449 Transcription elongation factor, N-terminal D0887_RS23790 PF01272 Transcription elongation factor, GreA/GreB, C-term D0887_RS23795 PF01985 CRS1 / YhbY (CRM) domain D0887_RS23805 PF01728 FtsJ-like methyltransferase D0887_RS23810 PF17862 AAA+ lid domain D0887_RS23810 PF00004 ATPase family associated with various cellular activities (AAA) D0887_RS23810 PF01434 Peptidase family M41 D0887_RS23810 PF06480 FtsH Extracellular D0887_RS23815 PF00809 Pterin binding enzyme D0887_RS23820 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III D0887_RS23820 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I D0887_RS23820 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain D0887_RS23820 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II D0887_RS23825 PF03840 Preprotein translocase SecG subunit D0887_RS23840 PF07437 YfaZ precursor D0887_RS23845 PF15977 Winged helix-turn-helix DNA binding D0887_RS23850 PF00764 Arginosuccinate synthase D0887_RS23860 PF17384 RimP C-terminal SH3 domain D0887_RS23860 PF02576 RimP N-terminal domain D0887_RS23865 PF00575 S1 RNA binding domain D0887_RS23865 PF13184 NusA-like KH domain D0887_RS23865 PF08529 NusA N-terminal domain D0887_RS23870 PF11987 Translation-initiation factor 2 D0887_RS23870 PF08364 Bacterial translation initiation factor IF-2 associated region D0887_RS23870 PF04760 Translation initiation factor IF-2, N-terminal region D0887_RS23870 PF00009 Elongation factor Tu GTP binding domain D0887_RS23875 PF02033 Ribosome-binding factor A D0887_RS23880 PF16198 tRNA pseudouridylate synthase B C-terminal domain D0887_RS23880 PF01509 TruB family pseudouridylate synthase (N terminal domain) D0887_RS23880 PF09157 Pseudouridine synthase II TruB, C-terminal D0887_RS23885 PF00312 Ribosomal protein S15 D0887_RS23895 PF00013 KH domain D0887_RS23895 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain D0887_RS23895 PF03725 3' exoribonuclease family, domain 2 D0887_RS23895 PF01138 3' exoribonuclease family, domain 1 D0887_RS23895 PF00575 S1 RNA binding domain D0887_RS23900 PF13181 Tetratricopeptide repeat D0887_RS23900 PF07719 Tetratricopeptide repeat D0887_RS23910 PF12343 Cold shock protein DEAD box A D0887_RS23910 PF03880 DbpA RNA binding domain D0887_RS23910 PF00270 DEAD/DEAH box helicase D0887_RS23910 PF00271 Helicase conserved C-terminal domain D0887_RS23915 PF03222 Tryptophan/tyrosine permease family D0887_RS23920 PF00296 Luciferase-like monooxygenase D0887_RS23925 PF01136 Peptidase family U32 D0887_RS23930 PF01136 Peptidase family U32 D0887_RS23935 PF02036 SCP-2 sterol transfer family D0887_RS23940 PF13508 Acetyltransferase (GNAT) domain D0887_RS23945 PF01541 GIY-YIG catalytic domain D0887_RS23955 PF01965 DJ-1/PfpI family D0887_RS23960 PF13460 NAD(P)H-binding D0887_RS23965 PF03773 Predicted permease D0887_RS23970 PF04972 BON domain D0887_RS23975 PF13580 SIS domain D0887_RS23980 PF02021 Uncharacterised protein family UPF0102 D0887_RS23985 PF04348 LppC putative lipoprotein D0887_RS23990 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D0887_RS23995 PF08666 SAF domain D0887_RS23995 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus D0887_RS24000 PF07690 Major Facilitator Superfamily D0887_RS24005 PF03328 HpcH/HpaI aldolase/citrate lyase family D0887_RS24010 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D0887_RS24010 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase D0887_RS24015 PF02595 Glycerate kinase family D0887_RS24035 PF02678 Pirin D0887_RS24035 PF17954 Quercetinase C-terminal cupin domain D0887_RS24040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0887_RS24040 PF03466 LysR substrate binding domain D0887_RS24045 PF05656 Protein of unknown function (DUF805) D0887_RS24050 PF13409 Glutathione S-transferase, N-terminal domain D0887_RS24055 PF07681 DoxX D0887_RS24060 PF13997 YqjK-like protein D0887_RS24065 PF07332 Putative Actinobacterial Holin-X, holin superfamily III D0887_RS24070 PF05957 Bacterial protein of unknown function (DUF883) D0887_RS24075 PF06476 Protein of unknown function (DUF1090) D0887_RS24080 PF13721 SecD export protein N-terminal TM region D0887_RS24085 PF09335 SNARE associated Golgi protein D0887_RS24090 PF07729 FCD domain D0887_RS24090 PF00392 Bacterial regulatory proteins, gntR family D0887_RS24095 PF07690 Major Facilitator Superfamily D0887_RS24100 PF02614 Glucuronate isomerase D0887_RS24105 PF08666 SAF domain D0887_RS24105 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus D0887_RS24110 PF10688 Bacterial inner membrane protein D0887_RS24115 PF00375 Sodium:dicarboxylate symporter family D0887_RS24120 PF03741 Integral membrane protein TerC family D0887_RS24125 PF01408 Oxidoreductase family, NAD-binding Rossmann fold D0887_RS24130 PF01863 Protein of unknown function DUF45 D0887_RS24145 PF05175 Methyltransferase small domain D0887_RS24150 PF07992 Pyridine nucleotide-disulphide oxidoreductase D0887_RS24150 PF00724 NADH:flavin oxidoreductase / NADH oxidase family D0887_RS24155 PF00370 FGGY family of carbohydrate kinases, N-terminal domain D0887_RS24155 PF02782 FGGY family of carbohydrate kinases, C-terminal domain D0887_RS24160 PF04198 Putative sugar-binding domain D0887_RS24165 PF00005 ABC transporter D0887_RS24170 PF02653 Branched-chain amino acid transport system / permease component D0887_RS24175 PF02653 Branched-chain amino acid transport system / permease component D0887_RS24180 PF13407 Periplasmic binding protein domain D0887_RS24185 PF01791 DeoC/LacD family aldolase D0887_RS24190 PF03992 Antibiotic biosynthesis monooxygenase D0887_RS24195 PF00202 Aminotransferase class-III D0887_RS24205 PF03551 Transcriptional regulator PadR-like family D0887_RS24210 PF08021 Siderophore-interacting FAD-binding domain D0887_RS24210 PF04954 Siderophore-interacting protein D0887_RS24215 PF02734 DAK2 domain D0887_RS24215 PF02733 Dak1 domain D0887_RS24220 PF00391 PEP-utilising enzyme, mobile domain D0887_RS24220 PF05524 PEP-utilising enzyme, N-terminal D0887_RS24220 PF00381 PTS HPr component phosphorylation site D0887_RS24220 PF03610 PTS system fructose IIA component D0887_RS24225 PF02734 DAK2 domain D0887_RS24230 PF02733 Dak1 domain D0887_RS24250 PF00465 Iron-containing alcohol dehydrogenase D0887_RS24255 PF02954 Bacterial regulatory protein, Fis family D0887_RS24255 PF00158 Sigma-54 interaction domain D0887_RS24255 PF00989 PAS fold D0887_RS24260 PF01923 Cobalamin adenosyltransferase D0887_RS24265 PF02288 Dehydratase medium subunit D0887_RS24270 PF00465 Iron-containing alcohol dehydrogenase D0887_RS24275 PF03928 Haem-degrading D0887_RS24280 PF02286 Dehydratase large subunit D0887_RS24285 PF02288 Dehydratase medium subunit D0887_RS24290 PF02287 Dehydratase small subunit D0887_RS24295 PF08841 Diol dehydratase reactivase ATPase-like domain D0887_RS24295 PF18427 DD-reactivating factor swiveling domain D0887_RS24300 PF00230 Major intrinsic protein D0887_RS24305 PF06411 HdeA/HdeB family D0887_RS24310 PF03729 Short repeat of unknown function (DUF308) D0887_RS24315 PF10938 YfdX protein D0887_RS24320 PF00497 Bacterial extracellular solute-binding proteins, family 3 D0887_RS24320 PF01627 Hpt domain D0887_RS24320 PF00072 Response regulator receiver domain D0887_RS24320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0887_RS24320 PF00512 His Kinase A (phospho-acceptor) domain D0887_RS24325 PF00196 Bacterial regulatory proteins, luxR family D0887_RS24325 PF00072 Response regulator receiver domain D0887_RS24350 PF00486 Transcriptional regulatory protein, C terminal D0887_RS24350 PF00072 Response regulator receiver domain D0887_RS24360 PF00419 Fimbrial protein D0887_RS24365 PF00419 Fimbrial protein D0887_RS24370 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain D0887_RS24370 PF02753 Pili assembly chaperone PapD, C-terminal domain D0887_RS24375 PF13954 PapC N-terminal domain D0887_RS24375 PF13953 PapC C-terminal domain D0887_RS24375 PF00577 Outer membrane usher protein D0887_RS24380 PF00419 Fimbrial protein D0887_RS24390 PF09160 FimH, mannose binding D0887_RS24390 PF00419 Fimbrial protein D0887_RS24395 PF00563 EAL domain D0887_RS24395 PF12792 CSS motif domain associated with EAL D0887_RS24400 PF00589 Phage integrase family D0887_RS24410 PF16452 Bacteriophage CI repressor C-terminal domain D0887_RS24410 PF07022 Bacteriophage CI repressor helix-turn-helix domain D0887_RS24420 PF06892 Phage regulatory protein CII (CP76) D0887_RS24430 PF17282 Family of unknown function (DUF5347) D0887_RS24440 PF02086 D12 class N6 adenine-specific DNA methyltransferase D0887_RS24445 PF05840 Bacteriophage replication gene A protein (GPA) D0887_RS24455 PF06183 DinI-like family D0887_RS24565 PF04984 Phage tail sheath protein subtilisin-like domain D0887_RS24565 PF17482 Phage tail sheath C-terminal domain D0887_RS24600 PF04606 Ogr/Delta-like zinc finger D0887_RS24610 PF03167 Uracil DNA glycosylase superfamily D0887_RS24615 PF04545 Sigma-70, region 4 D0887_RS24615 PF04539 Sigma-70 region 3 D0887_RS24615 PF03979 Sigma-70 factor, region 1.1 D0887_RS24615 PF00140 Sigma-70 factor, region 1.2 D0887_RS24615 PF04542 Sigma-70 region 2 D0887_RS24615 PF04546 Sigma-70, non-essential region D0887_RS24620 PF08278 DNA primase DnaG DnaB-binding D0887_RS24620 PF10410 DnaB-helicase binding domain of primase D0887_RS24620 PF01807 CHC2 zinc finger D0887_RS24620 PF08275 DNA primase catalytic core, N-terminal domain D0887_RS24625 PF01165 Ribosomal protein S21 D0887_RS24635 PF00814 Glycoprotease family D0887_RS24645 PF02492 CobW/HypB/UreG, nucleotide-binding domain D0887_RS24650 PF01730 UreF D0887_RS24655 PF05194 UreE urease accessory protein, C-terminal domain D0887_RS24655 PF02814 UreE urease accessory protein, N-terminal domain D0887_RS24660 PF02371 Transposase IS116/IS110/IS902 family D0887_RS24660 PF01548 Transposase D0887_RS24670 PF00699 Urease beta subunit D0887_RS24675 PF00547 Urease, gamma subunit D0887_RS24680 PF01774 UreD urease accessory protein D0887_RS24690 PF02660 Glycerol-3-phosphate acyltransferase D0887_RS24695 PF02152 Dihydroneopterin aldolase D0887_RS24700 PF02673 Bacitracin resistance protein BacA D0887_RS24705 PF01743 Poly A polymerase head domain D0887_RS24705 PF12627 Probable RNA and SrmB- binding site of polymerase A D0887_RS24705 PF01966 HD domain D0887_RS24710 PF08239 Bacterial SH3 domain D0887_RS24715 PF01928 CYTH domain D0887_RS24720 PF03710 Glutamate-ammonia ligase adenylyltransferase D0887_RS24720 PF08335 GlnD PII-uridylyltransferase D0887_RS24725 PF00294 pfkB family carbohydrate kinase D0887_RS24725 PF01467 Cytidylyltransferase-like D0887_RS24730 PF08971 Glycogen synthesis protein D0887_RS24735 PF04380 Membrane fusogenic activity D0887_RS24740 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase D0887_RS24745 PF02535 ZIP Zinc transporter D0887_RS24750 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase D0887_RS24755 PF03738 Glutathionylspermidine synthase preATP-grasp D0887_RS24760 PF06693 Protein of unknown function (DUF1190) D0887_RS24765 PF02321 Outer membrane efflux protein D0887_RS24770 PF00293 NUDIX domain D0887_RS24775 PF06853 Protein of unknown function (DUF1249) D0887_RS24780 PF00149 Calcineurin-like phosphoesterase D0887_RS24785 PF05728 Uncharacterised protein family (UPF0227) D0887_RS24790 PF00986 DNA gyrase B subunit, carboxyl terminus D0887_RS24790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0887_RS24790 PF00204 DNA gyrase B D0887_RS24790 PF01751 Toprim domain D0887_RS24795 PF03992 Antibiotic biosynthesis monooxygenase D0887_RS24800 PF02525 Flavodoxin-like fold D0887_RS24805 PF00512 His Kinase A (phospho-acceptor) domain D0887_RS24805 PF08521 Two-component sensor kinase N-terminal D0887_RS24805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0887_RS24810 PF00486 Transcriptional regulatory protein, C terminal D0887_RS24810 PF00072 Response regulator receiver domain D0887_RS24815 PF04076 Bacterial OB fold (BOF) protein D0887_RS24820 PF06445 GyrI-like small molecule binding domain D0887_RS24825 PF00521 DNA gyrase/topoisomerase IV, subunit A D0887_RS24825 PF03989 DNA gyrase C-terminal domain, beta-propeller D0887_RS24830 PF01553 Acyltransferase D0887_RS24835 PF07731 Multicopper oxidase D0887_RS24835 PF07732 Multicopper oxidase D0887_RS24835 PF00394 Multicopper oxidase D0887_RS24840 PF08497 Radical SAM N-terminal D0887_RS24840 PF11842 Domain of unknown function (DUF3362) D0887_RS24840 PF04055 Radical SAM superfamily D0887_RS24850 PF00248 Aldo/keto reductase family D0887_RS24855 PF00465 Iron-containing alcohol dehydrogenase D0887_RS24860 PF12833 Helix-turn-helix domain D0887_RS24860 PF06719 AraC-type transcriptional regulator N-terminus D0887_RS24865 PF09335 SNARE associated Golgi protein D0887_RS24870 PF01053 Cys/Met metabolism PLP-dependent enzyme D0887_RS24880 PF01618 MotA/TolQ/ExbB proton channel family D0887_RS24885 PF02472 Biopolymer transport protein ExbD/TolR D0887_RS24895 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain D0887_RS24895 PF04616 Glycosyl hydrolases family 43 D0887_RS24900 PF03350 Uncharacterized protein family, UPF0114 D0887_RS24905 PF01738 Dienelactone hydrolase family D0887_RS24910 PF11115 Protein of unknown function (DUF2623) D0887_RS24915 PF02798 Glutathione S-transferase, N-terminal domain D0887_RS24925 PF05257 CHAP domain D0887_RS24925 PF03738 Glutathionylspermidine synthase preATP-grasp D0887_RS24930 PF00155 Aminotransferase class I and II D0887_RS24950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0887_RS24950 PF03466 LysR substrate binding domain D0887_RS24955 PF01053 Cys/Met metabolism PLP-dependent enzyme D0887_RS24960 PF00291 Pyridoxal-phosphate dependent enzyme D0887_RS24960 PF00571 CBS domain D0887_RS24970 PF04474 Protein of unknown function (DUF554) D0887_RS24980 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain D0887_RS24980 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain D0887_RS24980 PF01276 Orn/Lys/Arg decarboxylase, major domain D0887_RS24985 PF03825 Nucleoside H+ symporter D0887_RS24990 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain D0887_RS24990 PF01464 Transglycosylase SLT domain D0887_RS24995 PF04362 Bacterial Fe(2+) trafficking D0887_RS25000 PF14815 NUDIX domain D0887_RS25000 PF00730 HhH-GPD superfamily base excision DNA repair protein D0887_RS25000 PF10576 Iron-sulfur binding domain of endonuclease III D0887_RS25000 PF00633 Helix-hairpin-helix motif D0887_RS25005 PF02390 Putative methyltransferase D0887_RS25010 PF04320 Protein with unknown function (DUF469) D0887_RS25015 PF11101 Protein of unknown function (DUF2884) D0887_RS25020 PF04055 Radical SAM superfamily D0887_RS25020 PF06969 HemN C-terminal domain D0887_RS25025 PF01725 Ham1 family D0887_RS25030 PF02594 Uncharacterised ACR, YggU family COG1872 D0887_RS25035 PF02325 YGGT family D0887_RS25040 PF01168 Alanine racemase, N-terminal domain D0887_RS25045 PF00437 Type II/IV secretion system protein D0887_RS25050 PF00196 Bacterial regulatory proteins, luxR family D0887_RS25055 PF03652 Holliday junction resolvase D0887_RS25060 PF02622 Uncharacterized ACR, COG1678 D0887_RS25065 PF02951 Prokaryotic glutathione synthetase, N-terminal domain D0887_RS25065 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain D0887_RS25070 PF04452 RNA methyltransferase D0887_RS25075 PF04231 Endonuclease I D0887_RS25080 PF17283 SprT-like zinc ribbon domain D0887_RS25080 PF10263 SprT-like family D0887_RS25085 PF00083 Sugar (and other) transporter D0887_RS25090 PF02773 S-adenosylmethionine synthetase, C-terminal domain D0887_RS25090 PF02772 S-adenosylmethionine synthetase, central domain D0887_RS25090 PF00438 S-adenosylmethionine synthetase, N-terminal domain D0887_RS25105 PF17810 Arginine decarboxylase helical bundle domain D0887_RS25105 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain D0887_RS25105 PF17944 Arginine decarboxylase C-terminal helical extension D0887_RS25110 PF00491 Arginase family D0887_RS25115 PF03573 outer membrane porin, OprD family D0887_RS25120 PF01435 Peptidase family M48 D0887_RS25125 PF02780 Transketolase, C-terminal domain D0887_RS25125 PF00456 Transketolase, thiamine diphosphate binding domain D0887_RS25125 PF02779 Transketolase, pyrimidine binding domain D0887_RS25130 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain D0887_RS25130 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain D0887_RS25135 PF00162 Phosphoglycerate kinase D0887_RS25140 PF01116 Fructose-bisphosphate aldolase class-II D0887_RS25145 PF00924 Mechanosensitive ion channel D0887_RS25145 PF05552 Conserved TM helix D0887_RS25150 PF01810 LysE type translocator D0887_RS25155 PF04402 Protein of unknown function (DUF541) D0887_RS25160 PF03466 LysR substrate binding domain D0887_RS25160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0887_RS25165 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) D0887_RS25170 PF01842 ACT domain D0887_RS25170 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D0887_RS25170 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D0887_RS25175 PF01812 5-formyltetrahydrofolate cyclo-ligase family D0887_RS25185 PF05164 Cell division protein ZapA D0887_RS25190 PF03695 Uncharacterised protein family (UPF0149) D0887_RS25195 PF00557 Metallopeptidase family M24 D0887_RS25195 PF05195 Aminopeptidase P, N-terminal domain D0887_RS25200 PF01494 FAD binding domain D0887_RS25205 PF01494 FAD binding domain D0887_RS25210 PF08669 Glycine cleavage T-protein C-terminal barrel domain D0887_RS25210 PF01571 Aminomethyltransferase folate-binding domain D0887_RS25215 PF01597 Glycine cleavage H-protein D0887_RS25220 PF02347 Glycine cleavage system P-protein D0887_RS25230 PF00578 AhpC/TSA family D0887_RS25250 PF00232 Glycosyl hydrolase family 1 D0887_RS25255 PF01380 SIS domain D0887_RS25255 PF01418 Helix-turn-helix domain, rpiR family D0887_RS25260 PF04266 ASCH domain D0887_RS25265 PF03006 Haemolysin-III related D0887_RS25270 PF01571 Aminomethyltransferase folate-binding domain D0887_RS25275 PF03937 Flavinator of succinate dehydrogenase D0887_RS25280 PF07254 Membrane-bound toxin component of toxin-antitoxin system D0887_RS25285 PF00258 Flavodoxin D0887_RS25290 PF00589 Phage integrase family D0887_RS25290 PF02899 Phage integrase, N-terminal SAM-like domain D0887_RS25295 PF13098 Thioredoxin-like domain D0887_RS25295 PF10411 Disulfide bond isomerase protein N-terminus D0887_RS25300 PF17768 RecJ OB domain D0887_RS25300 PF01368 DHH family D0887_RS25300 PF02272 DHHA1 domain D0887_RS25310 PF00152 tRNA synthetases class II (D, K and N) D0887_RS25310 PF01336 OB-fold nucleic acid binding domain D0887_RS25315 PF00293 NUDIX domain D0887_RS25325 PF01551 Peptidase family M23 D0887_RS25325 PF01476 LysM domain D0887_RS25335 PF00589 Phage integrase family D0887_RS25335 PF02899 Phage integrase, N-terminal SAM-like domain D0887_RS25365 PF07690 Major Facilitator Superfamily D0887_RS25370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0887_RS25370 PF03466 LysR substrate binding domain D0887_RS25380 PF00248 Aldo/keto reductase family D0887_RS25385 PF02525 Flavodoxin-like fold D0887_RS25395 PF03466 LysR substrate binding domain D0887_RS25395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0887_RS25415 PF01022 Bacterial regulatory protein, arsR family D0887_RS25420 PF02040 Arsenical pump membrane protein D0887_RS25425 PF03960 ArsC family D0887_RS25430 PF00854 POT family D0887_RS25435 PF08986 Domain of unknown function (DUF1889) D0887_RS25440 PF02321 Outer membrane efflux protein D0887_RS25445 PF04632 Fusaric acid resistance protein family D0887_RS25450 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D0887_RS25450 PF00529 HlyD membrane-fusion protein of T1SS D0887_RS25455 PF17090 Uncharacterised protein family D0887_RS25460 PF06902 Divergent 4Fe-4S mono-cluster D0887_RS25465 PF14542 GCN5-related N-acetyl-transferase D0887_RS25475 PF09160 FimH, mannose binding D0887_RS25475 PF00419 Fimbrial protein D0887_RS25485 PF00419 Fimbrial protein D0887_RS25490 PF13954 PapC N-terminal domain D0887_RS25490 PF00577 Outer membrane usher protein D0887_RS25490 PF13953 PapC C-terminal domain D0887_RS25495 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain D0887_RS25495 PF02753 Pili assembly chaperone PapD, C-terminal domain D0887_RS25500 PF00419 Fimbrial protein D0887_RS25505 PF00419 Fimbrial protein D0887_RS25510 PF00589 Phage integrase family D0887_RS25515 PF00589 Phage integrase family D0887_RS25525 PF03824 High-affinity nickel-transport protein D0887_RS25530 PF01047 MarR family D0887_RS25535 PF00892 EamA-like transporter family D0887_RS25545 PF00419 Fimbrial protein D0887_RS25550 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain D0887_RS25550 PF02753 Pili assembly chaperone PapD, C-terminal domain D0887_RS25555 PF13954 PapC N-terminal domain D0887_RS25555 PF13953 PapC C-terminal domain D0887_RS25555 PF00577 Outer membrane usher protein D0887_RS25560 PF00419 Fimbrial protein D0887_RS25575 PF00072 Response regulator receiver domain D0887_RS25575 PF00196 Bacterial regulatory proteins, luxR family D0887_RS25585 PF00248 Aldo/keto reductase family D0887_RS25590 PF03222 Tryptophan/tyrosine permease family D0887_RS25600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0887_RS25600 PF03466 LysR substrate binding domain D0887_RS25605 PF00108 Thiolase, N-terminal domain D0887_RS25605 PF02803 Thiolase, C-terminal domain D0887_RS25610 PF06178 Oligogalacturonate-specific porin protein (KdgM) D0887_RS25615 PF14583 Oligogalacturonate lyase D0887_RS25625 PF00083 Sugar (and other) transporter D0887_RS25630 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family D0887_RS25630 PF00356 Bacterial regulatory proteins, lacI family D0887_RS25635 PF01306 LacY proton/sugar symporter D0887_RS25640 PF08244 Glycosyl hydrolases family 32 C terminal D0887_RS25640 PF00251 Glycosyl hydrolases family 32 N-terminal domain D0887_RS25655 PF17912 MalK OB fold domain D0887_RS25655 PF00005 ABC transporter D0887_RS25660 PF00528 Binding-protein-dependent transport system inner membrane component D0887_RS25665 PF00528 Binding-protein-dependent transport system inner membrane component D0887_RS25670 PF16867 Dimethlysulfonioproprionate lyase D0887_RS25675 PF01177 Asp/Glu/Hydantoin racemase D0887_RS25680 PF03466 LysR substrate binding domain D0887_RS25680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0887_RS25685 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain D0887_RS25685 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain D0887_RS25690 PF00356 Bacterial regulatory proteins, lacI family D0887_RS25700 PF02378 Phosphotransferase system, EIIC D0887_RS25705 PF00232 Glycosyl hydrolase family 1 D0887_RS25710 PF00392 Bacterial regulatory proteins, gntR family D0887_RS25710 PF07729 FCD domain D0887_RS25720 PF00356 Bacterial regulatory proteins, lacI family D0887_RS25735 PF01553 Acyltransferase D0887_RS25735 PF00501 AMP-binding enzyme D0887_RS25740 PF07690 Major Facilitator Superfamily D0887_RS25745 PF00248 Aldo/keto reductase family D0887_RS25750 PF06004 Bacterial protein of unknown function (DUF903) D0887_RS25755 PF03741 Integral membrane protein TerC family D0887_RS25760 PF02976 DNA mismatch repair enzyme MutH D0887_RS25765 PF00293 NUDIX domain D0887_RS25770 PF00391 PEP-utilising enzyme, mobile domain D0887_RS25770 PF05524 PEP-utilising enzyme, N-terminal D0887_RS25770 PF02896 PEP-utilising enzyme, TIM barrel domain D0887_RS25770 PF01590 GAF domain D0887_RS25775 PF01790 Prolipoprotein diacylglyceryl transferase D0887_RS25780 PF00303 Thymidylate synthase D0887_RS25785 PF07963 Prokaryotic N-terminal methylation motif D0887_RS25790 PF07963 Prokaryotic N-terminal methylation motif D0887_RS25795 PF10713 Protein of unknown function (DUF2509) D0887_RS25800 PF07963 Prokaryotic N-terminal methylation motif D0887_RS25800 PF12528 Type II secretion prepilin peptidase dependent protein C D0887_RS25805 PF17946 RecC C-terminal domain D0887_RS25810 PF00675 Insulinase (Peptidase family M16) D0887_RS25810 PF05193 Peptidase M16 inactive domain D0887_RS25810 PF16187 Middle or third domain of peptidase_M16 D0887_RS25815 PF00580 UvrD/REP helicase N-terminal domain D0887_RS25815 PF12705 PD-(D/E)XK nuclease superfamily D0887_RS25815 PF13361 UvrD-like helicase C-terminal domain D0887_RS25820 PF13538 UvrD-like helicase C-terminal domain D0887_RS25830 PF00583 Acetyltransferase (GNAT) family D0887_RS25830 PF00696 Amino acid kinase family D0887_RS25835 PF11741 AMIN domain D0887_RS25835 PF01520 N-acetylmuramoyl-L-alanine amidase D0887_RS25840 PF00155 Aminotransferase class I and II D0887_RS25845 PF00288 GHMP kinases N terminal domain D0887_RS25850 PF00871 Acetokinase family D0887_RS25855 PF10662 Ethanolamine utilisation - propanediol utilisation D0887_RS25860 PF00936 BMC domain D0887_RS25870 PF10531 SLBB domain D0887_RS25870 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit D0887_RS25870 PF13237 4Fe-4S dicluster domain D0887_RS25870 PF13375 RnfC Barrel sandwich hybrid domain D0887_RS25875 PF00171 Aldehyde dehydrogenase family D0887_RS25875 PF00465 Iron-containing alcohol dehydrogenase D0887_RS25880 PF00171 Aldehyde dehydrogenase family D0887_RS25885 PF01923 Cobalamin adenosyltransferase D0887_RS25890 PF03319 Ethanolamine utilisation protein EutN/carboxysome D0887_RS25900 PF06130 Phosphate propanoyltransferase D0887_RS25905 PF00936 BMC domain D0887_RS25910 PF00936 BMC domain D0887_RS25920 PF08841 Diol dehydratase reactivase ATPase-like domain D0887_RS25920 PF18427 DD-reactivating factor swiveling domain D0887_RS25925 PF02287 Dehydratase small subunit D0887_RS25930 PF02288 Dehydratase medium subunit D0887_RS25935 PF02286 Dehydratase large subunit D0887_RS25940 PF00936 BMC domain D0887_RS25945 PF00936 BMC domain D0887_RS25950 PF00230 Major intrinsic protein D0887_RS25955 PF12833 Helix-turn-helix domain D0887_RS25955 PF10114 Sensory domain found in PocR D0887_RS25960 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain D0887_RS25960 PF07685 CobB/CobQ-like glutamine amidotransferase domain D0887_RS25965 PF03186 CobD/Cbib protein D0887_RS25970 PF02570 Precorrin-8X methylmutase D0887_RS25975 PF01888 CbiD D0887_RS25980 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D0887_RS25985 PF05175 Methyltransferase small domain D0887_RS25990 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D0887_RS25995 PF01890 Cobalamin synthesis G C-terminus D0887_RS25995 PF11761 Cobalamin biosynthesis central region D0887_RS25995 PF11760 Cobalamin synthesis G N-terminal D0887_RS26000 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D0887_RS26005 PF02571 Precorrin-6x reductase CbiJ/CobK D0887_RS26010 PF06180 Cobalt chelatase (CbiK) D0887_RS26015 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D0887_RS26020 PF01891 Cobalt uptake substrate-specific transmembrane region D0887_RS26025 PF02553 Cobalt transport protein component CbiN D0887_RS26030 PF02361 Cobalt transport protein D0887_RS26035 PF00005 ABC transporter D0887_RS26040 PF07685 CobB/CobQ-like glutamine amidotransferase domain D0887_RS26045 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase D0887_RS26050 PF02277 Phosphoribosyltransferase D0887_RS26070 PF03562 MltA specific insert domain D0887_RS26070 PF06725 3D domain D0887_RS26075 PF00899 ThiF family D0887_RS26080 PF02657 Fe-S metabolism associated domain D0887_RS26085 PF00266 Aminotransferase class-V D0887_RS26090 PF06004 Bacterial protein of unknown function (DUF903) D0887_RS26095 PF03466 LysR substrate binding domain D0887_RS26095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0887_RS26100 PF04241 Protein of unknown function (DUF423) D0887_RS26105 PF18125 RlmM ferredoxin-like domain D0887_RS26105 PF01728 FtsJ-like methyltransferase D0887_RS26110 PF00455 DeoR C terminal sensor domain D0887_RS26110 PF08220 DeoR-like helix-turn-helix domain D0887_RS26115 PF05025 RbsD / FucU transport protein family D0887_RS26120 PF00370 FGGY family of carbohydrate kinases, N-terminal domain D0887_RS26120 PF02782 FGGY family of carbohydrate kinases, C-terminal domain D0887_RS26125 PF07882 L-fucose isomerase, second N-terminal domain D0887_RS26125 PF07881 L-fucose isomerase, first N-terminal domain D0887_RS26125 PF02952 L-fucose isomerase, C-terminal domain D0887_RS26130 PF07690 Major Facilitator Superfamily D0887_RS26135 PF00596 Class II Aldolase and Adducin N-terminal domain D0887_RS26140 PF00465 Iron-containing alcohol dehydrogenase D0887_RS26145 PF01367 5'-3' exonuclease, C-terminal SAM fold D0887_RS26145 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain D0887_RS26150 PF00158 Sigma-54 interaction domain D0887_RS26155 PF00296 Luciferase-like monooxygenase D0887_RS26165 PF00296 Luciferase-like monooxygenase D0887_RS26170 PF00005 ABC transporter D0887_RS26175 PF00528 Binding-protein-dependent transport system inner membrane component D0887_RS26180 PF03180 NLPA lipoprotein D0887_RS26190 PF07690 Major Facilitator Superfamily D0887_RS26200 PF09084 NMT1/THI5 like D0887_RS26205 PF03315 Serine dehydratase beta chain D0887_RS26205 PF03313 Serine dehydratase alpha chain D0887_RS26215 PF03641 Possible lysine decarboxylase D0887_RS26215 PF11892 Domain of unknown function (DUF3412) D0887_RS26215 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases D0887_RS26220 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term D0887_RS26220 PF14489 QueF-like protein D0887_RS26225 PF07348 Syd protein (SUKH-2) D0887_RS26230 PF04287 tRNA pseudouridine synthase C D0887_RS26235 PF00849 RNA pseudouridylate synthase D0887_RS26240 PF00258 Flavodoxin D0887_RS26245 PF07690 Major Facilitator Superfamily D0887_RS26250 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain D0887_RS26250 PF13378 Enolase C-terminal domain-like D0887_RS26255 PF13378 Enolase C-terminal domain-like D0887_RS26260 PF02595 Glycerate kinase family D0887_RS26270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0887_RS26270 PF00672 HAMP domain D0887_RS26270 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) D0887_RS26270 PF00072 Response regulator receiver domain D0887_RS26270 PF01627 Hpt domain D0887_RS26270 PF00512 His Kinase A (phospho-acceptor) domain D0887_RS26275 PF01938 TRAM domain D0887_RS26275 PF05958 tRNA (Uracil-5-)-methyltransferase D0887_RS26280 PF13291 ACT domain D0887_RS26280 PF02824 TGS domain D0887_RS26280 PF04607 Region found in RelA / SpoT proteins D0887_RS26285 PF03819 MazG nucleotide pyrophosphohydrolase domain D0887_RS26290 PF06418 CTP synthase N-terminus D0887_RS26290 PF00117 Glutamine amidotransferase class-I D0887_RS26295 PF00113 Enolase, C-terminal TIM barrel domain D0887_RS26295 PF03952 Enolase, N-terminal domain D0887_RS26305 PF04055 Radical SAM superfamily D0887_RS26310 PF01242 6-pyruvoyl tetrahydropterin synthase D0887_RS26315 PF00667 FAD binding domain D0887_RS26315 PF00258 Flavodoxin D0887_RS26315 PF00175 Oxidoreductase NAD-binding domain D0887_RS26320 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain D0887_RS26320 PF01077 Nitrite and sulphite reductase 4Fe-4S domain D0887_RS26325 PF01507 Phosphoadenosine phosphosulfate reductase family D0887_RS26330 PF04389 Peptidase family M28 D0887_RS26335 PF10414 Sirohaem synthase dimerisation region D0887_RS26335 PF14824 Sirohaem biosynthesis protein central D0887_RS26335 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D0887_RS26340 PF01507 Phosphoadenosine phosphosulfate reductase family D0887_RS26345 PF00009 Elongation factor Tu GTP binding domain D0887_RS26355 PF12084 Protein of unknown function (DUF3561) D0887_RS26360 PF04977 Septum formation initiator D0887_RS26365 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase D0887_RS26370 PF02542 YgbB family D0887_RS26375 PF01142 tRNA pseudouridine synthase D (TruD) D0887_RS26380 PF01975 Survival protein SurE D0887_RS26390 PF01551 Peptidase family M23 D0887_RS26390 PF01476 LysM domain D0887_RS26395 PF00140 Sigma-70 factor, region 1.2 D0887_RS26395 PF04539 Sigma-70 region 3 D0887_RS26395 PF04545 Sigma-70, region 4 D0887_RS26395 PF04542 Sigma-70 region 2 D0887_RS26405 PF07690 Major Facilitator Superfamily D0887_RS26410 PF03466 LysR substrate binding domain D0887_RS26410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0887_RS26415 PF01047 MarR family D0887_RS26420 PF02441 Flavoprotein D0887_RS26425 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase D0887_RS26440 PF01848 Hok/gef family D0887_RS26445 PF01624 MutS domain I D0887_RS26445 PF05188 MutS domain II D0887_RS26445 PF05192 MutS domain III D0887_RS26445 PF05190 MutS family domain IV D0887_RS26445 PF00488 MutS domain V D0887_RS26465 PF00005 ABC transporter D0887_RS26470 PF01032 FecCD transport family D0887_RS26475 PF01497 Periplasmic binding protein D0887_RS26480 PF05171 Haemin-degrading HemS.ChuX domain D0887_RS26485 PF07715 TonB-dependent Receptor Plug Domain D0887_RS26485 PF00593 TonB dependent receptor D0887_RS26495 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D0887_RS26495 PF00205 Thiamine pyrophosphate enzyme, central domain D0887_RS26495 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D0887_RS26500 PF03547 Membrane transport protein D0887_RS26510 PF11756 Nitrous oxide-stimulated promoter D0887_RS26515 PF00950 ABC 3 transport family D0887_RS26520 PF00950 ABC 3 transport family D0887_RS26525 PF00005 ABC transporter D0887_RS26530 PF01297 Zinc-uptake complex component A periplasmic D0887_RS26535 PF00356 Bacterial regulatory proteins, lacI family D0887_RS26540 PF00480 ROK family D0887_RS26545 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit D0887_RS26550 PF02378 Phosphotransferase system, EIIC D0887_RS26555 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit D0887_RS26560 PF02378 Phosphotransferase system, EIIC D0887_RS26570 PF02264 LamB porin D0887_RS26580 PF00232 Glycosyl hydrolase family 1 D0887_RS26585 PF02954 Bacterial regulatory protein, Fis family D0887_RS26585 PF01590 GAF domain D0887_RS26585 PF00158 Sigma-54 interaction domain D0887_RS26590 PF02769 AIR synthase related protein, C-terminal domain D0887_RS26590 PF00586 AIR synthase related protein, N-terminal domain D0887_RS26595 PF01924 Hydrogenase formation hypA family D0887_RS26600 PF01455 HupF/HypC family D0887_RS26605 PF02492 CobW/HypB/UreG, nucleotide-binding domain D0887_RS26610 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA D0887_RS26615 PF11046 Transcriptional repressor of hyc and hyp operons D0887_RS26625 PF13247 4Fe-4S dicluster domain D0887_RS26630 PF00361 Proton-conducting membrane transporter D0887_RS26635 PF00146 NADH dehydrogenase D0887_RS26640 PF00374 Nickel-dependent hydrogenase D0887_RS26640 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit D0887_RS26640 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit D0887_RS26645 PF12838 4Fe-4S dicluster domain D0887_RS26650 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit D0887_RS26655 PF07450 Formate hydrogenlyase maturation protein HycH D0887_RS26660 PF01750 Hydrogenase maturation protease D0887_RS26665 PF08845 Toxin SymE, type I toxin-antitoxin system D0887_RS26670 PF00232 Glycosyl hydrolase family 1 D0887_RS26675 PF02378 Phosphotransferase system, EIIC D0887_RS26675 PF00367 phosphotransferase system, EIIB D0887_RS26685 PF00356 Bacterial regulatory proteins, lacI family D0887_RS26690 PF13247 4Fe-4S dicluster domain D0887_RS26690 PF12800 4Fe-4S binding domain D0887_RS26695 PF01300 Telomere recombination D0887_RS26695 PF17788 HypF Kae1-like domain D0887_RS26695 PF00708 Acylphosphatase D0887_RS26695 PF07503 HypF finger D0887_RS26700 PF03824 High-affinity nickel-transport protein D0887_RS26705 PF18113 Rubredoxin binding C-terminal domain D0887_RS26705 PF07992 Pyridine nucleotide-disulphide oxidoreductase D0887_RS26710 PF00258 Flavodoxin D0887_RS26710 PF00753 Metallo-beta-lactamase superfamily D0887_RS26710 PF00301 Rubredoxin D0887_RS26720 PF00158 Sigma-54 interaction domain D0887_RS26720 PF01590 GAF domain D0887_RS26725 PF01380 SIS domain D0887_RS26725 PF00571 CBS domain D0887_RS26730 PF00455 DeoR C terminal sensor domain D0887_RS26730 PF08220 DeoR-like helix-turn-helix domain D0887_RS26735 PF06923 Glucitol operon activator protein (GutM) D0887_RS26740 PF00106 short chain dehydrogenase D0887_RS26745 PF03829 PTS system glucitol/sorbitol-specific IIA component D0887_RS26750 PF03612 Sorbitol phosphotransferase enzyme II N-terminus D0887_RS26750 PF07663 Sorbitol phosphotransferase enzyme II C-terminus D0887_RS26755 PF03608 PTS system enzyme II sorbitol-specific factor D0887_RS26760 PF13406 Transglycosylase SLT domain D0887_RS26770 PF00005 ABC transporter D0887_RS26775 PF00950 ABC 3 transport family D0887_RS26780 PF01297 Zinc-uptake complex component A periplasmic D0887_RS26785 PF02464 Competence-damaged protein D0887_RS26790 PF00154 recA bacterial DNA recombination protein D0887_RS26795 PF02631 RecX family D0887_RS26800 PF02272 DHHA1 domain D0887_RS26800 PF01411 tRNA synthetases class II (A) D0887_RS26800 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain D0887_RS26810 PF02599 Global regulator protein family D0887_RS26840 PF04972 BON domain D0887_RS26845 PF13419 Haloacid dehalogenase-like hydrolase D0887_RS26850 PF09335 SNARE associated Golgi protein D0887_RS26855 PF04262 Glutamate-cysteine ligase D0887_RS26860 PF02664 S-Ribosylhomocysteinase (LuxS) D0887_RS26865 PF12852 Cupin D0887_RS26865 PF12833 Helix-turn-helix domain D0887_RS26870 PF08502 LeuA allosteric (dimerisation) domain D0887_RS26870 PF00682 HMGL-like D0887_RS26875 PF07690 Major Facilitator Superfamily D0887_RS26880 PF00529 HlyD membrane-fusion protein of T1SS D0887_RS26880 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D0887_RS26885 PF01047 MarR family D0887_RS26890 PF05437 Branched-chain amino acid transport protein (AzlD) D0887_RS26895 PF03591 AzlC protein D0887_RS26900 PF04069 Substrate binding domain of ABC-type glycine betaine transport system D0887_RS26905 PF00528 Binding-protein-dependent transport system inner membrane component D0887_RS26910 PF00005 ABC transporter D0887_RS26910 PF00571 CBS domain D0887_RS26915 PF00268 Ribonucleotide reductase, small chain D0887_RS26920 PF08343 Ribonucleotide reductase N-terminal D0887_RS26920 PF02867 Ribonucleotide reductase, barrel domain D0887_RS26920 PF00317 Ribonucleotide reductase, all-alpha domain D0887_RS26925 PF07972 NrdI Flavodoxin like D0887_RS26930 PF00462 Glutaredoxin D0887_RS26935 PF02627 Carboxymuconolactone decarboxylase family D0887_RS26940 PF00392 Bacterial regulatory proteins, gntR family D0887_RS26940 PF00155 Aminotransferase class I and II D0887_RS26945 PF05957 Bacterial protein of unknown function (DUF883) D0887_RS26950 PF09400 Protein of unknown function (DUF2002) D0887_RS26955 PF06610 L-alanine exporter D0887_RS26970 PF00816 H-NS histone family D0887_RS26985 PF00581 Rhodanese-like domain D0887_RS26985 PF11127 Protein of unknown function (DUF2892) D0887_RS26990 PF01022 Bacterial regulatory protein, arsR family D0887_RS26995 PF02525 Flavodoxin-like fold D0887_RS27000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0887_RS27000 PF03466 LysR substrate binding domain D0887_RS27005 PF01590 GAF domain D0887_RS27005 PF02954 Bacterial regulatory protein, Fis family D0887_RS27005 PF00158 Sigma-54 interaction domain D0887_RS27010 PF00171 Aldehyde dehydrogenase family D0887_RS27015 PF16970 Type-1 fimbrial protein, A D0887_RS27020 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain D0887_RS27020 PF02753 Pili assembly chaperone PapD, C-terminal domain D0887_RS27025 PF00577 Outer membrane usher protein D0887_RS27025 PF13954 PapC N-terminal domain D0887_RS27025 PF13953 PapC C-terminal domain D0887_RS27040 PF13953 PapC C-terminal domain D0887_RS27040 PF13954 PapC N-terminal domain D0887_RS27040 PF00577 Outer membrane usher protein D0887_RS27045 PF02753 Pili assembly chaperone PapD, C-terminal domain D0887_RS27045 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain D0887_RS27050 PF00419 Fimbrial protein D0887_RS27055 PF00072 Response regulator receiver domain D0887_RS27055 PF00196 Bacterial regulatory proteins, luxR family D0887_RS27070 PF00106 short chain dehydrogenase D0887_RS27075 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D0887_RS27080 PF00596 Class II Aldolase and Adducin N-terminal domain D0887_RS27085 PF00005 ABC transporter D0887_RS27090 PF00497 Bacterial extracellular solute-binding proteins, family 3 D0887_RS27105 PF00491 Arginase family D0887_RS27110 PF03466 LysR substrate binding domain D0887_RS27110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0887_RS27120 PF00873 AcrB/AcrD/AcrF family D0887_RS27125 PF00529 HlyD membrane-fusion protein of T1SS D0887_RS27125 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D0887_RS27130 PF06445 GyrI-like small molecule binding domain D0887_RS27130 PF12833 Helix-turn-helix domain D0887_RS27140 PF03466 LysR substrate binding domain D0887_RS27140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0887_RS27155 PF01668 SmpB protein D0887_RS27160 PF03364 Polyketide cyclase / dehydrase and lipid transport D0887_RS27165 PF03658 RnfH family Ubiquitin D0887_RS27170 PF04355 SmpA / OmlA family D0887_RS27175 PF02463 RecF/RecN/SMC N terminal domain D0887_RS27180 PF01513 ATP-NAD kinase D0887_RS27190 PF01025 GrpE D0887_RS27195 PF00571 CBS domain D0887_RS27195 PF03471 Transporter associated domain D0887_RS27195 PF01595 Cyclin M transmembrane N-terminal domain D0887_RS27200 PF01578 Cytochrome C assembly protein D0887_RS27205 PF02978 Signal peptide binding domain D0887_RS27205 PF02881 SRP54-type protein, helical bundle domain D0887_RS27205 PF00448 SRP54-type protein, GTPase domain D0887_RS27210 PF00886 Ribosomal protein S16 D0887_RS27215 PF05239 PRC-barrel domain D0887_RS27215 PF01782 RimM N-terminal domain D0887_RS27220 PF01746 tRNA (Guanine-1)-methyltransferase D0887_RS27225 PF01245 Ribosomal protein L19 D0887_RS27240 PF00691 OmpA family D0887_RS27245 PF00990 Diguanylate cyclase, GGDEF domain D0887_RS27245 PF17152 Periplasmic sensor domain D0887_RS27250 PF13689 YfiR/HmsC-like D0887_RS27255 PF00793 DAHP synthetase I family D0887_RS27260 PF01817 Chorismate mutase type II D0887_RS27260 PF02153 Prephenate dehydrogenase D0887_RS27265 PF08450 SMP-30/Gluconolactonase/LRE-like region D0887_RS27270 PF01817 Chorismate mutase type II D0887_RS27270 PF00800 Prephenate dehydratase D0887_RS27280 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein D0887_RS27290 PF13525 Outer membrane lipoprotein D0887_RS27295 PF01479 S4 domain D0887_RS27295 PF00849 RNA pseudouridylate synthase D0887_RS27300 PF02578 Multi-copper polyphenol oxidoreductase laccase D0887_RS27305 PF17871 AAA lid domain D0887_RS27305 PF00004 ATPase family associated with various cellular activities (AAA) D0887_RS27305 PF07724 AAA domain (Cdc48 subfamily) D0887_RS27305 PF02861 Clp amino terminal domain, pathogenicity island component D0887_RS27305 PF10431 C-terminal, D2-small domain, of ClpB protein D0887_RS27330 PF00083 Sugar (and other) transporter D0887_RS27335 PF10043 Predicted periplasmic lipoprotein (DUF2279) D0887_RS27340 PF13091 PLD-like domain D0887_RS27345 PF13380 CoA binding domain D0887_RS27345 PF13607 Succinyl-CoA ligase like flavodoxin domain D0887_RS27345 PF00583 Acetyltransferase (GNAT) family D0887_RS27350 PF03942 DTW domain D0887_RS27355 PF00085 Thioredoxin D0887_RS27360 PF00588 SpoU rRNA Methylase family D0887_RS27360 PF08032 RNA 2'-O ribose methyltransferase substrate binding D0887_RS27365 PF03167 Uracil DNA glycosylase superfamily D0887_RS27370 PF01228 Glycine radical D0887_RS27375 PF00270 DEAD/DEAH box helicase D0887_RS27375 PF00271 Helicase conserved C-terminal domain D0887_RS27380 PF05175 Methyltransferase small domain D0887_RS27385 PF02910 Fumarate reductase flavoprotein C-term D0887_RS27385 PF00890 FAD binding domain D0887_RS27390 PF08281 Sigma-70, region 4 D0887_RS27390 PF04542 Sigma-70 region 2 D0887_RS27395 PF03873 Anti sigma-E protein RseA, C-terminal domain D0887_RS27395 PF03872 Anti sigma-E protein RseA, N-terminal domain D0887_RS27400 PF17188 MucB/RseB C-terminal domain D0887_RS27400 PF03888 MucB/RseB N-terminal domain D0887_RS27410 PF00009 Elongation factor Tu GTP binding domain D0887_RS27410 PF06421 GTP-binding protein LepA C-terminus D0887_RS27410 PF03144 Elongation factor Tu domain 2 D0887_RS27410 PF00679 Elongation factor G C-terminus D0887_RS27415 PF10502 Signal peptidase, peptidase S26 D0887_RS27420 PF00035 Double-stranded RNA binding motif D0887_RS27420 PF14622 Ribonuclease-III-like D0887_RS27425 PF01926 50S ribosome-binding GTPase D0887_RS27425 PF07650 KH domain D0887_RS27430 PF11967 Recombination protein O N terminal D0887_RS27430 PF02565 Recombination protein O C terminal D0887_RS27435 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ D0887_RS27440 PF01648 4'-phosphopantetheinyl transferase superfamily D0887_RS27445 PF12838 4Fe-4S dicluster domain D0887_RS27450 PF01418 Helix-turn-helix domain, rpiR family D0887_RS27450 PF01380 SIS domain D0887_RS27460 PF14437 MafB19-like deaminase D0887_RS27465 PF00497 Bacterial extracellular solute-binding proteins, family 3 D0887_RS27465 PF01464 Transglycosylase SLT domain D0887_RS27470 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain D0887_RS27470 PF02769 AIR synthase related protein, C-terminal domain D0887_RS27470 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal D0887_RS27475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0887_RS27475 PF00512 His Kinase A (phospho-acceptor) domain D0887_RS27480 PF13942 YfhG lipoprotein D0887_RS27485 PF00072 Response regulator receiver domain D0887_RS27485 PF00158 Sigma-54 interaction domain D0887_RS27490 PF00543 Nitrogen regulatory protein P-II D0887_RS27495 PF00970 Oxidoreductase FAD-binding domain D0887_RS27495 PF00175 Oxidoreductase NAD-binding domain D0887_RS27495 PF00042 Globin D0887_RS27505 PF00464 Serine hydroxymethyltransferase D0887_RS27510 PF07681 DoxX D0887_RS27515 PF14759 Reductase C-terminal D0887_RS27515 PF07992 Pyridine nucleotide-disulphide oxidoreductase D0887_RS27525 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) D0887_RS27530 PF07745 Glycosyl hydrolase family 53 D0887_RS27535 PF00267 Gram-negative porin D0887_RS27540 PF01301 Glycosyl hydrolases family 35 D0887_RS27545 PF01306 LacY proton/sugar symporter D0887_RS27550 PF00480 ROK family D0887_RS27555 PF13181 Tetratricopeptide repeat D0887_RS27555 PF17128 Domain of unknown function (DUF5107) D0887_RS27560 PF00083 Sugar (and other) transporter D0887_RS27565 PF01263 Aldose 1-epimerase D0887_RS27570 PF12832 MFS_1 like family D0887_RS27575 PF00874 PRD domain D0887_RS27580 PF06226 Protein of unknown function (DUF1007) D0887_RS27585 PF03824 High-affinity nickel-transport protein D0887_RS27595 PF00459 Inositol monophosphatase family D0887_RS27600 PF00588 SpoU rRNA Methylase family D0887_RS27605 PF02082 Transcriptional regulator D0887_RS27610 PF00266 Aminotransferase class-V D0887_RS27615 PF01592 NifU-like N terminal domain D0887_RS27620 PF01521 Iron-sulphur cluster biosynthesis D0887_RS27625 PF07743 HSCB C-terminal oligomerisation domain D0887_RS27625 PF00226 DnaJ domain D0887_RS27630 PF00012 Hsp70 protein D0887_RS27635 PF00111 2Fe-2S iron-sulfur cluster binding domain D0887_RS27640 PF04384 Iron-sulphur cluster assembly D0887_RS27645 PF00883 Cytosol aminopeptidase family, catalytic domain D0887_RS27645 PF12404 Peptidase D0887_RS27650 PF07179 SseB protein N-terminal domain D0887_RS27650 PF14581 SseB protein C-terminal domain D0887_RS27660 PF00581 Rhodanese-like domain D0887_RS27665 PF11974 Bacterial alpha-2-macroglobulin MG3 domain D0887_RS27665 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain D0887_RS27665 PF00207 Alpha-2-macroglobulin family D0887_RS27665 PF07703 Alpha-2-macroglobulin bait region domain D0887_RS27665 PF07678 A-macroglobulin TED domain D0887_RS27665 PF01835 MG2 domain D0887_RS27665 PF17962 Bacterial macroglobulin domain 6 D0887_RS27665 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain D0887_RS27665 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain D0887_RS27670 PF00912 Transglycosylase D0887_RS27670 PF06832 Penicillin-Binding Protein C-terminus Family D0887_RS27670 PF00905 Penicillin binding protein transpeptidase domain D0887_RS27675 PF00334 Nucleoside diphosphate kinase D0887_RS27685 PF04055 Radical SAM superfamily D0887_RS27690 PF13464 Domain of unknown function (DUF4115) D0887_RS27695 PF04551 GcpE protein D0887_RS27700 PF13393 Histidyl-tRNA synthetase D0887_RS27700 PF03129 Anticodon binding domain D0887_RS27705 PF09976 Tetratricopeptide repeat-like domain D0887_RS27710 PF13360 PQQ-like domain D0887_RS27715 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal D0887_RS27715 PF01926 50S ribosome-binding GTPase D0887_RS27745 PF07191 zinc-ribbons D0887_RS27750 PF13742 OB-fold nucleic acid binding domain D0887_RS27750 PF02601 Exonuclease VII, large subunit D0887_RS27755 PF00571 CBS domain D0887_RS27755 PF00478 IMP dehydrogenase / GMP reductase domain D0887_RS27760 PF00117 Glutamine amidotransferase class-I D0887_RS27760 PF00958 GMP synthase C terminal domain D0887_RS27760 PF02540 NAD synthase D0887_RS27765 PF00884 Sulfatase D0887_RS27770 PF13186 Iron-sulfur cluster-binding domain D0887_RS27770 PF04055 Radical SAM superfamily D0887_RS27780 PF03466 LysR substrate binding domain D0887_RS27780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0887_RS27785 PF11119 Protein of unknown function (DUF2633) D0887_RS27790 PF00563 EAL domain D0887_RS27790 PF05231 MASE1 D0887_RS27795 PF02541 Ppx/GppA phosphatase family D0887_RS27800 PF13090 Polyphosphate kinase C-terminal domain 2 D0887_RS27800 PF17941 Polyphosphate kinase C-terminal domain 1 D0887_RS27800 PF13089 Polyphosphate kinase N-terminal domain D0887_RS27800 PF02503 Polyphosphate kinase middle domain D0887_RS27805 PF00551 Formyl transferase D0887_RS27810 PF02769 AIR synthase related protein, C-terminal domain D0887_RS27810 PF00586 AIR synthase related protein, N-terminal domain D0887_RS27815 PF00480 ROK family D0887_RS27820 PF00232 Glycosyl hydrolase family 1 D0887_RS27830 PF00860 Permease family D0887_RS27835 PF01051 Initiator Replication protein D0887_RS27840 PF00589 Phage integrase family D0887_RS27875 PF01048 Phosphorylase superfamily D0887_RS27880 PF13737 Transposase DDE domain D0887_RS27905 PF13276 HTH-like domain D0887_RS27905 PF00665 Integrase core domain D0887_RS27905 PF13333 Integrase core domain D0887_RS27915 PF13737 Transposase DDE domain D0887_RS27950 PF00574 Clp protease D0887_RS27960 PF00392 Bacterial regulatory proteins, gntR family D0887_RS27960 PF00155 Aminotransferase class I and II D0887_RS27970 PF13358 DDE superfamily endonuclease D0887_RS27970 PF13592 Winged helix-turn helix D0887_RS27995 PF02371 Transposase IS116/IS110/IS902 family D0887_RS27995 PF01548 Transposase D0887_RS28025 PF04229 GrpB protein D0887_RS28025 PF13673 Acetyltransferase (GNAT) domain D0887_RS28035 PF00455 DeoR C terminal sensor domain D0887_RS28035 PF08220 DeoR-like helix-turn-helix domain D0887_RS28040 PF02502 Ribose/Galactose Isomerase D0887_RS28045 PF03611 PTS system sugar-specific permease component D0887_RS28050 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit D0887_RS28055 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D0887_RS28055 PF02378 Phosphotransferase system, EIIC D0887_RS28055 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit D0887_RS28060 PF01380 SIS domain D0887_RS28065 PF00155 Aminotransferase class I and II D0887_RS28070 PF00892 EamA-like transporter family D0887_RS28090 PF01323 DSBA-like thioredoxin domain D0887_RS28095 PF00724 NADH:flavin oxidoreductase / NADH oxidase family D0887_RS28100 PF01161 Phosphatidylethanolamine-binding protein D0887_RS28105 PF12833 Helix-turn-helix domain D0887_RS28110 PF00085 Thioredoxin D0887_RS28115 PF11975 Family 4 glycosyl hydrolase C-terminal domain D0887_RS28115 PF02056 Family 4 glycosyl hydrolase D0887_RS28120 PF03466 LysR substrate binding domain D0887_RS28120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0887_RS28125 PF02627 Carboxymuconolactone decarboxylase family D0887_RS28145 PF02463 RecF/RecN/SMC N terminal domain D0887_RS28150 PF01850 PIN domain D0887_RS28155 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin D0887_RS28170 PF03929 PepSY-associated TM region D0887_RS28180 PF07715 TonB-dependent Receptor Plug Domain D0887_RS28180 PF00593 TonB dependent receptor D0887_RS28185 PF00005 ABC transporter D0887_RS28185 PF00664 ABC transporter transmembrane region D0887_RS28190 PF00005 ABC transporter D0887_RS28190 PF00664 ABC transporter transmembrane region D0887_RS28190 PF04954 Siderophore-interacting protein D0887_RS28190 PF08021 Siderophore-interacting FAD-binding domain D0887_RS28195 PF12833 Helix-turn-helix domain D0887_RS28245 PF00574 Clp protease D0887_RS28255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0887_RS28255 PF03466 LysR substrate binding domain D0887_RS28265 PF00529 HlyD membrane-fusion protein of T1SS D0887_RS28265 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D0887_RS28280 PF02311 AraC-like ligand binding domain D0887_RS28280 PF12833 Helix-turn-helix domain D0887_RS28290 PF02586 SOS response associated peptidase (SRAP) D0887_RS28295 PF00664 ABC transporter transmembrane region D0887_RS28295 PF00005 ABC transporter D0887_RS28320 PF02371 Transposase IS116/IS110/IS902 family D0887_RS28320 PF01548 Transposase D0887_RS28340 PF10128 Glucose-6-phosphate dehydrogenase subunit D0887_RS28340 PF01471 Putative peptidoglycan binding domain D0887_RS28350 PF02387 IncFII RepA protein family D0887_RS28365 PF10723 Replication regulatory protein RepB D0887_RS28395 PF04352 ProQ/FINO family D0887_RS28395 PF12602 Fertility inhibition protein N terminal D0887_RS28400 PF05857 TraX protein D0887_RS28405 PF08751 TrwC relaxase D0887_RS28405 PF07057 DNA helicase TraI D0887_RS28405 PF18340 DNA relaxase TraI 2B/2B-like domain D0887_RS28405 PF18272 single-stranded DNA binding TraI N-terminal subdomain D0887_RS28410 PF12615 F sex factor protein N terminal D0887_RS28410 PF10412 Type IV secretion-system coupling protein DNA-binding domain D0887_RS28420 PF05818 Enterobacterial TraT complement resistance protein D0887_RS28430 PF07916 TraG-like protein, N-terminal region D0887_RS28435 PF06122 Conjugative relaxosome accessory transposon protein D0887_RS28445 PF13728 F plasmid transfer operon protein D0887_RS28450 PF09679 Type-F conjugative transfer system pilin chaperone (TraQ) D0887_RS28455 PF13728 F plasmid transfer operon protein D0887_RS28470 PF11100 Conjugal transfer protein TrbE D0887_RS28475 PF06986 Type-1V conjugative transfer system mating pair stabilisation D0887_RS28480 PF09673 Type-F conjugative transfer system pilin assembly protein D0887_RS28485 PF06834 TraU protein D0887_RS28495 PF12477 Sex factor F TraW protein N terminal D0887_RS28500 PF09677 Type-F conjugative transfer system protein (TrbI_Ftype) D0887_RS28505 PF11130 F pilus assembly Type-IV secretion system for plasmid transfer D0887_RS28535 PF09676 Type IV conjugative transfer system lipoprotein (TraV) D0887_RS28545 PF03743 Bacterial conjugation TrbI-like protein D0887_RS28550 PF06586 TraK protein D0887_RS28555 PF05309 TraE protein D0887_RS28560 PF07178 TraL protein D0887_RS28565 PF05513 TraA D0887_RS28570 PF05509 TraY domain D0887_RS28580 PF05261 TraM protein, DNA-binding D0887_RS28585 PF01464 Transglycosylase SLT domain D0887_RS28595 PF06067 Domain of unknown function (DUF932) D0887_RS28615 PF01848 Hok/gef family D0887_RS28640 PF06290 Plasmid SOS inhibition protein (PsiB) D0887_RS28645 PF02195 ParB-like nuclease domain D0887_RS28645 PF02195 ParB-like nuclease domain D0887_RS28650 PF06006 Bacterial protein of unknown function (DUF905) D0887_RS28655 PF00436 Single-strand binding protein family D0887_RS28700 PF06440 DNA polymerase III, theta subunit D0887_RS28705 PF03230 Antirestriction protein D0887_RS28730 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) D0887_RS28740 PF00717 Peptidase S24-like D0887_RS28745 PF13438 Domain of unknown function (DUF4113) D0887_RS28745 PF00817 impB/mucB/samB family D0887_RS28745 PF11799 impB/mucB/samB family C-terminal domain D0887_RS28770 PF18090 Centromere-binding protein HTH domain D0887_RS28770 PF02195 ParB-like nuclease domain D0887_RS28775 PF13614 AAA domain D0887_RS28840 PF01343 Peptidase family S49 D0887_RS28885 PF00565 Staphylococcal nuclease homologue D0887_RS28890 PF00216 Bacterial DNA-binding protein D0887_RS28950 PF13610 DDE domain D0887_RS28960 PF03119 NAD-dependent DNA ligase C4 zinc finger domain D0887_RS28960 PF03120 NAD-dependent DNA ligase OB-fold domain D0887_RS28960 PF01653 NAD-dependent DNA ligase adenylation domain D0887_RS28960 PF12826 Helix-hairpin-helix motif D0887_RS28960 PF00533 BRCA1 C Terminus (BRCT) domain D0887_RS28975 PF01548 Transposase D0887_RS28975 PF02371 Transposase IS116/IS110/IS902 family D0887_RS28980 PF13700 Domain of unknown function (DUF4158) D0887_RS28980 PF01526 Tn3 transposase DDE domain D0887_RS28985 PF02796 Helix-turn-helix domain of resolvase D0887_RS28985 PF00239 Resolvase, N terminal domain D0887_RS28995 PF00589 Phage integrase family D0887_RS28995 PF13495 Phage integrase, N-terminal SAM-like domain D0887_RS29010 PF10706 Aminoglycoside-2''-adenylyltransferase D0887_RS29020 PF07690 Major Facilitator Superfamily D0887_RS29025 PF00905 Penicillin binding protein transpeptidase domain D0887_RS29030 PF01909 Nucleotidyltransferase domain D0887_RS29030 PF13427 Domain of unknown function (DUF4111) D0887_RS29035 PF00893 Small Multidrug Resistance protein D0887_RS29040 PF00809 Pterin binding enzyme D0887_RS29045 PF07690 Major Facilitator Superfamily D0887_RS29055 PF02909 Tetracyclin repressor-like, C-terminal domain D0887_RS29055 PF00440 Bacterial regulatory proteins, tetR family D0887_RS29060 PF07690 Major Facilitator Superfamily D0887_RS29065 PF03466 LysR substrate binding domain D0887_RS29065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0887_RS29075 PF00118 TCP-1/cpn60 chaperonin family D0887_RS29080 PF13542 Helix-turn-helix domain of transposase family ISL3 D0887_RS29080 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D0887_RS29080 PF01610 Transposase D0887_RS29090 PF07091 Ribosomal RNA methyltransferase (FmrO) D0887_RS29100 PF00239 Resolvase, N terminal domain D0887_RS29100 PF02796 Helix-turn-helix domain of resolvase D0887_RS29125 PF13610 DDE domain D0887_RS29135 PF02796 Helix-turn-helix domain of resolvase D0887_RS29135 PF00239 Resolvase, N terminal domain D0887_RS29155 PF07690 Major Facilitator Superfamily D0887_RS29160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0887_RS29160 PF03466 LysR substrate binding domain D0887_RS29170 PF07690 Major Facilitator Superfamily D0887_RS29175 PF02909 Tetracyclin repressor-like, C-terminal domain D0887_RS29175 PF00440 Bacterial regulatory proteins, tetR family D0887_RS29190 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase D0887_RS29195 PF01636 Phosphotransferase enzyme family D0887_RS29200 PF00809 Pterin binding enzyme D0887_RS29215 PF13614 AAA domain D0887_RS29220 PF08535 KorB domain D0887_RS29220 PF06613 KorB C-terminal beta-barrel domain D0887_RS29220 PF02195 ParB-like nuclease domain D0887_RS29265 PF00145 C-5 cytosine-specific DNA methylase D0887_RS29300 PF01131 DNA topoisomerase D0887_RS29300 PF01751 Toprim domain D0887_RS29390 PF10411 Disulfide bond isomerase protein N-terminus D0887_RS29390 PF13098 Thioredoxin-like domain D0887_RS29415 PF00990 Diguanylate cyclase, GGDEF domain D0887_RS29415 PF08447 PAS fold D0887_RS29415 PF00563 EAL domain D0887_RS29415 PF08448 PAS fold D0887_RS29425 PF13610 DDE domain D0887_RS29470 PF02899 Phage integrase, N-terminal SAM-like domain D0887_RS29470 PF00589 Phage integrase family D0887_RS29510 PF06122 Conjugative relaxosome accessory transposon protein D0887_RS29565 PF01051 Initiator Replication protein D0887_RS29585 PF00154 recA bacterial DNA recombination protein D0887_RS29595 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain D0887_RS29595 PF01367 5'-3' exonuclease, C-terminal SAM fold D0887_RS29625 PF07733 Bacterial DNA polymerase III alpha NTPase domain D0887_RS29625 PF17657 Bacterial DNA polymerase III alpha subunit finger domain D0887_RS29625 PF14579 Helix-hairpin-helix motif D0887_RS29625 PF02811 PHP domain D0887_RS29635 PF02811 PHP domain D0887_RS29635 PF14579 Helix-hairpin-helix motif D0887_RS29635 PF17657 Bacterial DNA polymerase III alpha subunit finger domain D0887_RS29635 PF07733 Bacterial DNA polymerase III alpha NTPase domain D0887_RS29650 PF06213 Cobalamin biosynthesis protein CobT D0887_RS29650 PF11775 Cobalamin biosynthesis protein CobT VWA domain D0887_RS29680 PF00462 Glutaredoxin D0887_RS29690 PF02562 PhoH-like protein D0887_RS29920 PF09383 NIL domain D0887_RS29920 PF00005 ABC transporter D0887_RS29925 PF17762 HTH domain found in ParB protein D0887_RS29925 PF02195 ParB-like nuclease domain D0887_RS29930 PF02195 ParB-like nuclease domain D0887_RS29930 PF17762 HTH domain found in ParB protein D0887_RS29935 PF00270 DEAD/DEAH box helicase D0887_RS29935 PF00271 Helicase conserved C-terminal domain D0887_RS29935 PF17191 RecG wedge domain D0887_RS30075 PF00075 RNase H D0887_RS30095 PF00929 Exonuclease D0887_RS30105 PF01121 Dephospho-CoA kinase D0887_RS30110 PF00186 Dihydrofolate reductase D0887_RS30120 PF00303 Thymidylate synthase D0887_RS30130 PF00268 Ribonucleotide reductase, small chain D0887_RS30135 PF00317 Ribonucleotide reductase, all-alpha domain D0887_RS30135 PF02867 Ribonucleotide reductase, barrel domain D0887_RS30135 PF03477 ATP cone domain D0887_RS30180 PF08048 Tap RepA1 leader peptide D0887_RS30215 PF00174 Oxidoreductase molybdopterin binding domain D0887_RS30220 PF01292 Prokaryotic cytochrome b561 D0887_RS30225 PF00072 Response regulator receiver domain D0887_RS30225 PF00486 Transcriptional regulatory protein, C terminal D0887_RS30230 PF16736 Single Cache-like D0887_RS30230 PF00989 PAS fold D0887_RS30230 PF00512 His Kinase A (phospho-acceptor) domain D0887_RS30230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0887_RS30245 PF13610 DDE domain D0887_RS30250 PF06308 23S rRNA methylastransferase leader peptide (ErmCL) D0887_RS30255 PF00398 Ribosomal RNA adenine dimethylase D0887_RS30295 PF10784 Plasmid stability protein D0887_RS30300 PF06406 StbA protein D0887_RS30310 PF01548 Transposase D0887_RS30310 PF02371 Transposase IS116/IS110/IS902 family D0887_RS30320 PF01555 DNA methylase D0887_RS30330 PF07128 Protein of unknown function (DUF1380) D0887_RS30340 PF03230 Antirestriction protein D0887_RS30345 PF07128 Protein of unknown function (DUF1380) D0887_RS30395 PF00436 Single-strand binding protein family D0887_RS30400 PF06006 Bacterial protein of unknown function (DUF905) D0887_RS30405 PF02195 ParB-like nuclease domain D0887_RS30410 PF06290 Plasmid SOS inhibition protein (PsiB) D0887_RS30415 PF06952 PsiA protein D0887_RS30440 PF06067 Domain of unknown function (DUF932) D0887_RS30445 PF01464 Transglycosylase SLT domain D0887_RS30450 PF05261 TraM protein, DNA-binding D0887_RS30460 PF05509 TraY domain D0887_RS30465 PF05513 TraA D0887_RS30470 PF07178 TraL protein D0887_RS30475 PF05309 TraE protein D0887_RS30480 PF06586 TraK protein D0887_RS30485 PF03743 Bacterial conjugation TrbI-like protein D0887_RS30490 PF07296 TraP protein D0887_RS30495 PF10894 Protein of unknown function (DUF2689) D0887_RS30500 PF09676 Type IV conjugative transfer system lipoprotein (TraV) D0887_RS30505 PF01258 Prokaryotic dksA/traR C4-type zinc finger D0887_RS30525 PF11130 F pilus assembly Type-IV secretion system for plasmid transfer D0887_RS30530 PF09677 Type-F conjugative transfer system protein (TrbI_Ftype) D0887_RS30535 PF12477 Sex factor F TraW protein N terminal D0887_RS30540 PF06834 TraU protein D0887_RS30550 PF09673 Type-F conjugative transfer system pilin assembly protein D0887_RS30555 PF06986 Type-1V conjugative transfer system mating pair stabilisation D0887_RS30560 PF11100 Conjugal transfer protein TrbE D0887_RS30565 PF13728 F plasmid transfer operon protein D0887_RS30580 PF09679 Type-F conjugative transfer system pilin chaperone (TraQ) D0887_RS30585 PF13728 F plasmid transfer operon protein D0887_RS30600 PF06122 Conjugative relaxosome accessory transposon protein D0887_RS30605 PF07916 TraG-like protein, N-terminal region D0887_RS30615 PF05818 Enterobacterial TraT complement resistance protein D0887_RS30625 PF10412 Type IV secretion-system coupling protein DNA-binding domain D0887_RS30625 PF12615 F sex factor protein N terminal D0887_RS30630 PF08751 TrwC relaxase D0887_RS30630 PF18272 single-stranded DNA binding TraI N-terminal subdomain D0887_RS30630 PF07057 DNA helicase TraI D0887_RS30630 PF18340 DNA relaxase TraI 2B/2B-like domain D0887_RS30635 PF05857 TraX protein D0887_RS30640 PF00561 alpha/beta hydrolase fold D0887_RS30645 PF04352 ProQ/FINO family D0887_RS30645 PF12602 Fertility inhibition protein N terminal D0887_RS30655 PF00565 Staphylococcal nuclease homologue D0887_RS30660 PF05321 Haemolysin expression modulating protein D0887_RS30680 PF01848 Hok/gef family D0887_RS30685 PF10723 Replication regulatory protein RepB D0887_RS30725 PF02517 CPBP intramembrane metalloprotease D0887_RS30735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0887_RS30735 PF03466 LysR substrate binding domain D0887_RS30740 PF00905 Penicillin binding protein transpeptidase domain D0887_RS30765 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system D0887_RS30770 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) D0887_RS30780 PF00717 Peptidase S24-like D0887_RS30785 PF13438 Domain of unknown function (DUF4113) D0887_RS30785 PF00817 impB/mucB/samB family D0887_RS30785 PF11799 impB/mucB/samB family C-terminal domain D0887_RS30855 PF00589 Phage integrase family D0887_RS30860 PF06406 StbA protein D0887_RS30870 PF13091 PLD-like domain D0887_RS30900 PF04002 RadC-like JAB domain D0887_RS30945 PF05321 Haemolysin expression modulating protein D0887_RS30965 PF03230 Antirestriction protein D0887_RS30980 PF00436 Single-strand binding protein family D0887_RS31005 PF03432 Relaxase/Mobilisation nuclease domain D0887_RS31130 PF00929 Exonuclease D0887_RS31205 PF13614 AAA domain D0887_RS31210 PF02195 ParB-like nuclease domain D0887_RS31210 PF18090 Centromere-binding protein HTH domain D0887_RS31300 PF01343 Peptidase family S49 D0887_RS31315 PF03354 Phage Terminase D0887_RS31365 PF01555 DNA methylase D0887_RS31425 PF03515 Colicin-like bacteriocin tRNase domain D0887_RS31425 PF11570 Coiled-coil receptor-binding R-domain of colicin E2 D0887_RS31425 PF09000 Cytotoxic D0887_RS31430 PF03513 Cloacin immunity protein D0887_RS31435 PF02402 Lysis protein D0887_RS31460 PF01815 Rop protein