locus-tag class description F3090_RS00005 PF00308 Bacterial dnaA protein F3090_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix F3090_RS00005 PF11638 DnaA N-terminal domain F3090_RS00010 PF02767 DNA polymerase III beta subunit, central domain F3090_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain F3090_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain F3090_RS00015 PF02463 RecF/RecN/SMC N terminal domain F3090_RS00020 PF01751 Toprim domain F3090_RS00020 PF00204 DNA gyrase B F3090_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus F3090_RS00020 PF18053 DNA gyrase B subunit insert domain F3090_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3090_RS00040 PF07729 FCD domain F3090_RS00040 PF00392 Bacterial regulatory proteins, gntR family F3090_RS00045 PF05035 2-keto-3-deoxy-galactonokinase F3090_RS00050 PF01081 KDPG and KHG aldolase F3090_RS00055 PF13378 Enolase C-terminal domain-like F3090_RS00055 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain F3090_RS00060 PF07690 Major Facilitator Superfamily F3090_RS00065 PF07676 WD40-like Beta Propeller Repeat F3090_RS00065 PF12566 Protein of unknown function (DUF3748) F3090_RS00070 PF07119 Protein of unknown function (DUF1375) F3090_RS00075 PF00011 Hsp20/alpha crystallin family F3090_RS00080 PF00011 Hsp20/alpha crystallin family F3090_RS00090 PF02080 TrkA-C domain F3090_RS00090 PF06826 Predicted Permease Membrane Region F3090_RS00095 PF00392 Bacterial regulatory proteins, gntR family F3090_RS00095 PF07702 UTRA domain F3090_RS00100 PF00367 phosphotransferase system, EIIB F3090_RS00100 PF02378 Phosphotransferase system, EIIC F3090_RS00105 PF02056 Family 4 glycosyl hydrolase F3090_RS00105 PF11975 Family 4 glycosyl hydrolase C-terminal domain F3090_RS00110 PF02656 Domain of unknown function (DUF202) F3090_RS00115 PF02656 Domain of unknown function (DUF202) F3090_RS00125 PF00291 Pyridoxal-phosphate dependent enzyme F3090_RS00130 PF02447 GntP family permease F3090_RS00140 PF03466 LysR substrate binding domain F3090_RS00140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3090_RS00145 PF07690 Major Facilitator Superfamily F3090_RS00175 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain F3090_RS00175 PF00205 Thiamine pyrophosphate enzyme, central domain F3090_RS00175 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain F3090_RS00180 PF01842 ACT domain F3090_RS00185 PF00072 Response regulator receiver domain F3090_RS00185 PF00196 Bacterial regulatory proteins, luxR family F3090_RS00190 PF05231 MASE1 F3090_RS00190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3090_RS00190 PF07730 Histidine kinase F3090_RS00195 PF07690 Major Facilitator Superfamily F3090_RS00200 PF07690 Major Facilitator Superfamily F3090_RS00205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3090_RS00205 PF03466 LysR substrate binding domain F3090_RS00210 PF06711 Protein of unknown function (DUF1198) F3090_RS00230 PF07690 Major Facilitator Superfamily F3090_RS00240 PF00266 Aminotransferase class-V F3090_RS00245 PF07702 UTRA domain F3090_RS00245 PF00392 Bacterial regulatory proteins, gntR family F3090_RS00250 PF01547 Bacterial extracellular solute-binding protein F3090_RS00255 PF08402 TOBE domain F3090_RS00255 PF00005 ABC transporter F3090_RS00260 PF00528 Binding-protein-dependent transport system inner membrane component F3090_RS00265 PF00528 Binding-protein-dependent transport system inner membrane component F3090_RS00270 PF02264 LamB porin F3090_RS00275 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit F3090_RS00280 PF02378 Phosphotransferase system, EIIC F3090_RS00280 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit F3090_RS00285 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit F3090_RS00290 PF00356 Bacterial regulatory proteins, lacI family F3090_RS00295 PF07690 Major Facilitator Superfamily F3090_RS00300 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit F3090_RS00300 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase F3090_RS00305 PF03466 LysR substrate binding domain F3090_RS00305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3090_RS00310 PF02585 GlcNAc-PI de-N-acetylase F3090_RS00315 PF03737 Aldolase/RraA F3090_RS00320 PF04303 PrpF protein F3090_RS00335 PF00892 EamA-like transporter family F3090_RS00340 PF00367 phosphotransferase system, EIIB F3090_RS00340 PF02378 Phosphotransferase system, EIIC F3090_RS00345 PF13580 SIS domain F3090_RS00350 PF07690 Major Facilitator Superfamily F3090_RS00355 PF02321 Outer membrane efflux protein F3090_RS00360 PF00873 AcrB/AcrD/AcrF family F3090_RS00365 PF00529 HlyD membrane-fusion protein of T1SS F3090_RS00365 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion F3090_RS00380 PF00583 Acetyltransferase (GNAT) family F3090_RS00385 PF00440 Bacterial regulatory proteins, tetR family F3090_RS00390 PF07690 Major Facilitator Superfamily F3090_RS00395 PF03466 LysR substrate binding domain F3090_RS00395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3090_RS00420 PF03180 NLPA lipoprotein F3090_RS00430 PF00293 NUDIX domain F3090_RS00435 PF12706 Beta-lactamase superfamily domain F3090_RS00440 PF01965 DJ-1/PfpI family F3090_RS00445 PF08240 Alcohol dehydrogenase GroES-like domain F3090_RS00445 PF00107 Zinc-binding dehydrogenase F3090_RS00460 PF08240 Alcohol dehydrogenase GroES-like domain F3090_RS00460 PF00107 Zinc-binding dehydrogenase F3090_RS00480 PF01055 Glycosyl hydrolases family 31 F3090_RS00480 PF13802 Galactose mutarotase-like F3090_RS00490 PF02056 Family 4 glycosyl hydrolase F3090_RS00490 PF11975 Family 4 glycosyl hydrolase C-terminal domain F3090_RS00495 PF00367 phosphotransferase system, EIIB F3090_RS00495 PF02378 Phosphotransferase system, EIIC F3090_RS00500 PF05170 AsmA family F3090_RS00505 PF00860 Permease family F3090_RS00510 PF03616 Sodium/glutamate symporter F3090_RS00515 PF02782 FGGY family of carbohydrate kinases, C-terminal domain F3090_RS00515 PF00370 FGGY family of carbohydrate kinases, N-terminal domain F3090_RS00520 PF00230 Major intrinsic protein F3090_RS00525 PF06005 Cell division protein ZapB F3090_RS00535 PF02611 CDP-diacylglycerol pyrophosphatase F3090_RS00545 PF00121 Triosephosphate isomerase F3090_RS00550 PF07305 Protein of unknown function (DUF1454) F3090_RS00555 PF05656 Protein of unknown function (DUF805) F3090_RS00560 PF00175 Oxidoreductase NAD-binding domain F3090_RS00560 PF00970 Oxidoreductase FAD-binding domain F3090_RS00565 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded F3090_RS00570 PF00271 Helicase conserved C-terminal domain F3090_RS00570 PF00270 DEAD/DEAH box helicase F3090_RS00570 PF17191 RecG wedge domain F3090_RS00575 PF00588 SpoU rRNA Methylase family F3090_RS00575 PF12105 SpoU, rRNA methylase, C-terminal F3090_RS00580 PF02824 TGS domain F3090_RS00580 PF04607 Region found in RelA / SpoT proteins F3090_RS00580 PF13291 ACT domain F3090_RS00585 PF01192 RNA polymerase Rpb6 F3090_RS00590 PF00625 Guanylate kinase F3090_RS00595 PF03120 NAD-dependent DNA ligase OB-fold domain F3090_RS00595 PF01653 NAD-dependent DNA ligase adenylation domain F3090_RS00600 PF03458 UPF0126 domain F3090_RS00610 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain F3090_RS00610 PF12833 Helix-turn-helix domain F3090_RS00610 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain F3090_RS00610 PF02805 Metal binding domain of Ada F3090_RS00635 PF00239 Resolvase, N terminal domain F3090_RS00635 PF02796 Helix-turn-helix domain of resolvase F3090_RS00645 PF01609 Transposase DDE domain F3090_RS00645 PF05598 Transposase domain (DUF772) F3090_RS00675 PF03755 YicC-like family, N-terminal region F3090_RS00675 PF08340 Domain of unknown function (DUF1732) F3090_RS00695 PF00005 ABC transporter F3090_RS00705 PF01138 3' exoribonuclease family, domain 1 F3090_RS00705 PF03725 3' exoribonuclease family, domain 2 F3090_RS00710 PF00156 Phosphoribosyl transferase domain F3090_RS00720 PF00440 Bacterial regulatory proteins, tetR family F3090_RS00725 PF00692 dUTPase F3090_RS00730 PF02441 Flavoprotein F3090_RS00730 PF04127 DNA / pantothenate metabolism flavoprotein F3090_RS00735 PF04002 RadC-like JAB domain F3090_RS00740 PF00830 Ribosomal L28 family F3090_RS00745 PF00471 Ribosomal protein L33 F3090_RS00750 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain F3090_RS00750 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain F3090_RS00750 PF06827 Zinc finger found in FPG and IleRS F3090_RS00755 PF01467 Cytidylyltransferase-like F3090_RS00760 PF00535 Glycosyl transferase family 2 F3090_RS00765 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) F3090_RS00770 PF00535 Glycosyl transferase family 2 F3090_RS00775 PF00534 Glycosyl transferases group 1 F3090_RS00775 PF13439 Glycosyltransferase Family 4 F3090_RS00780 PF00534 Glycosyl transferases group 1 F3090_RS00780 PF13439 Glycosyltransferase Family 4 F3090_RS00785 PF01075 Glycosyltransferase family 9 (heptosyltransferase) F3090_RS00800 PF04932 O-Antigen ligase F3090_RS00810 PF01075 Glycosyltransferase family 9 (heptosyltransferase) F3090_RS00815 PF01075 Glycosyltransferase family 9 (heptosyltransferase) F3090_RS00820 PF01370 NAD dependent epimerase/dehydratase family F3090_RS00825 PF00155 Aminotransferase class I and II F3090_RS00830 PF00107 Zinc-binding dehydrogenase F3090_RS00830 PF08240 Alcohol dehydrogenase GroES-like domain F3090_RS00835 PF00535 Glycosyl transferase family 2 F3090_RS00840 PF04748 Divergent polysaccharide deacetylase F3090_RS00845 PF01551 Peptidase family M23 F3090_RS00850 PF06415 BPG-independent PGAM N-terminus (iPGM_N) F3090_RS00850 PF01676 Metalloenzyme superfamily F3090_RS00855 PF00581 Rhodanese-like domain F3090_RS00860 PF00462 Glutaredoxin F3090_RS00865 PF02556 Preprotein translocase subunit SecB F3090_RS00870 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus F3090_RS00870 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus F3090_RS00875 PF00132 Bacterial transferase hexapeptide (six repeats) F3090_RS00875 PF06426 Serine acetyltransferase, N-terminal F3090_RS00880 PF00588 SpoU rRNA Methylase family F3090_RS00885 PF01070 FMN-dependent dehydrogenase F3090_RS00890 PF00392 Bacterial regulatory proteins, gntR family F3090_RS00890 PF07729 FCD domain F3090_RS00895 PF02652 L-lactate permease F3090_RS00900 PF10928 Protein of unknown function (DUF2810) F3090_RS00910 PF05068 Mannitol repressor F3090_RS00915 PF08125 Mannitol dehydrogenase C-terminal domain F3090_RS00915 PF01232 Mannitol dehydrogenase Rossmann domain F3090_RS00920 PF02378 Phosphotransferase system, EIIC F3090_RS00920 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit F3090_RS00920 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 F3090_RS00925 PF11742 Protein of unknown function (DUF3302) F3090_RS00930 PF00529 HlyD membrane-fusion protein of T1SS F3090_RS00930 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion F3090_RS00935 PF00043 Glutathione S-transferase, C-terminal domain F3090_RS00935 PF13417 Glutathione S-transferase, N-terminal domain F3090_RS00940 PF12390 Selenocysteine synthase N terminal F3090_RS00940 PF03841 L-seryl-tRNA selenium transferase F3090_RS00945 PF09107 Elongation factor SelB, winged helix F3090_RS00945 PF09106 Elongation factor SelB, winged helix F3090_RS00945 PF03144 Elongation factor Tu domain 2 F3090_RS00945 PF00009 Elongation factor Tu GTP binding domain F3090_RS00950 PF09339 IclR helix-turn-helix domain F3090_RS00950 PF01614 Bacterial transcriptional regulator F3090_RS00955 PF12800 4Fe-4S binding domain F3090_RS00955 PF13247 4Fe-4S dicluster domain F3090_RS00960 PF00155 Aminotransferase class I and II F3090_RS00965 PF00128 Alpha amylase, catalytic domain F3090_RS00970 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase F3090_RS00975 PF12833 Helix-turn-helix domain F3090_RS00980 PF02653 Branched-chain amino acid transport system / permease component F3090_RS00985 PF00005 ABC transporter F3090_RS00990 PF13407 Periplasmic binding protein domain F3090_RS01000 PF02782 FGGY family of carbohydrate kinases, C-terminal domain F3090_RS01000 PF00370 FGGY family of carbohydrate kinases, N-terminal domain F3090_RS01005 PF05360 yiaA/B two helix domain F3090_RS01010 PF05360 yiaA/B two helix domain F3090_RS01015 PF01757 Acyltransferase family F3090_RS01020 PF13983 YsaB-like lipoprotein F3090_RS01025 PF02091 Glycyl-tRNA synthetase alpha subunit F3090_RS01030 PF05746 DALR anticodon binding domain F3090_RS01030 PF02092 Glycyl-tRNA synthetase beta subunit F3090_RS01035 PF01848 Hok/gef family F3090_RS01040 PF12848 ABC transporter F3090_RS01040 PF00005 ABC transporter F3090_RS01045 PF00313 'Cold-shock' DNA-binding domain F3090_RS01050 PF01381 Helix-turn-helix F3090_RS01055 PF07690 Major Facilitator Superfamily F3090_RS01060 PF11254 Protein of unknown function (DUF3053) F3090_RS01065 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain F3090_RS01065 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain F3090_RS01070 PF07690 Major Facilitator Superfamily F3090_RS01075 PF00294 pfkB family carbohydrate kinase F3090_RS01085 PF00356 Bacterial regulatory proteins, lacI family F3090_RS01090 PF13488 Glycine zipper F3090_RS01090 PF00691 OmpA family F3090_RS01095 PF18364 Molybdopterin oxidoreductase N-terminal domain F3090_RS01095 PF00384 Molybdopterin oxidoreductase F3090_RS01095 PF01568 Molydopterin dinucleotide binding domain F3090_RS01100 PF00583 Acetyltransferase (GNAT) family F3090_RS01105 PF03352 Methyladenine glycosylase F3090_RS01115 PF07690 Major Facilitator Superfamily F3090_RS01120 PF08019 Phosphoethanolamine transferase EptA/EptB F3090_RS01120 PF00884 Sulfatase F3090_RS01150 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F3090_RS01155 PF00528 Binding-protein-dependent transport system inner membrane component F3090_RS01160 PF12911 N-terminal TM domain of oligopeptide transport permease C F3090_RS01160 PF00528 Binding-protein-dependent transport system inner membrane component F3090_RS01165 PF00005 ABC transporter F3090_RS01165 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F3090_RS01170 PF00005 ABC transporter F3090_RS01170 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F3090_RS01185 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain F3090_RS01190 PF00535 Glycosyl transferase family 2 F3090_RS01190 PF07238 PilZ domain F3090_RS01190 PF03170 Bacterial cellulose synthase subunit F3090_RS01190 PF03552 Cellulose synthase F3090_RS01195 PF03170 Bacterial cellulose synthase subunit F3090_RS01200 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) F3090_RS01210 PF01270 Glycosyl hydrolases family 8 F3090_RS01215 PF11658 Cellulose biosynthesis protein BcsG F3090_RS01220 PF11120 Cellulose biosynthesis protein BcsF F3090_RS01225 PF10995 Cellulose biosynthesis GIL F3090_RS01230 PF10945 Cellulose biosynthesis protein BcsR F3090_RS01235 PF06564 Cellulose biosynthesis protein BcsQ F3090_RS01240 PF00535 Glycosyl transferase family 2 F3090_RS01240 PF07238 PilZ domain F3090_RS01245 PF03170 Bacterial cellulose synthase subunit F3090_RS01250 PF01270 Glycosyl hydrolases family 8 F3090_RS01255 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) F3090_RS01260 PF17154 Gammaproteobacterial periplasmic sensor domain F3090_RS01260 PF00563 EAL domain F3090_RS01260 PF00990 Diguanylate cyclase, GGDEF domain F3090_RS01260 PF00672 HAMP domain F3090_RS01265 PF00375 Sodium:dicarboxylate symporter family F3090_RS01270 PF00675 Insulinase (Peptidase family M16) F3090_RS01270 PF05193 Peptidase M16 inactive domain F3090_RS01275 PF00294 pfkB family carbohydrate kinase F3090_RS01280 PF05170 AsmA family F3090_RS01285 PF00083 Sugar (and other) transporter F3090_RS01285 PF07690 Major Facilitator Superfamily F3090_RS01290 PF03631 Virulence factor BrkB F3090_RS01295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3090_RS01295 PF03466 LysR substrate binding domain F3090_RS01305 PF13302 Acetyltransferase (GNAT) domain F3090_RS01310 PF01204 Trehalase F3090_RS01315 PF00465 Iron-containing alcohol dehydrogenase F3090_RS01325 PF07992 Pyridine nucleotide-disulphide oxidoreductase F3090_RS01325 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain F3090_RS01330 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ F3090_RS01335 PF01569 PAP2 superfamily F3090_RS01340 PF01432 Peptidase family M3 F3090_RS01345 PF04445 Putative SAM-dependent methyltransferase F3090_RS01350 PF00854 POT family F3090_RS01355 PF00582 Universal stress protein family F3090_RS01360 PF10625 Universal stress protein B (UspB) F3090_RS01365 PF01384 Phosphate transporter family F3090_RS01390 PF01402 Ribbon-helix-helix protein, copG family F3090_RS01390 PF08753 NikR C terminal nickel binding domain F3090_RS01395 PF00005 ABC transporter F3090_RS01400 PF00005 ABC transporter F3090_RS01405 PF00528 Binding-protein-dependent transport system inner membrane component F3090_RS01410 PF00528 Binding-protein-dependent transport system inner membrane component F3090_RS01420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3090_RS01420 PF03466 LysR substrate binding domain F3090_RS01425 PF05870 Phenolic acid decarboxylase (PAD) F3090_RS01430 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family F3090_RS01435 PF00535 Glycosyl transferase family 2 F3090_RS01440 PF00551 Formyl transferase F3090_RS01440 PF01370 NAD dependent epimerase/dehydratase family F3090_RS01440 PF02911 Formyl transferase, C-terminal domain F3090_RS01445 PF01522 Polysaccharide deacetylase F3090_RS01450 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase F3090_RS01455 PF00892 EamA-like transporter family F3090_RS01465 PF01594 AI-2E family transporter F3090_RS01470 PF07690 Major Facilitator Superfamily F3090_RS01475 PF08786 DcrB F3090_RS01480 PF02592 Putative vitamin uptake transporter F3090_RS01485 PF01206 Sulfurtransferase TusA F3090_RS01490 PF00403 Heavy-metal-associated domain F3090_RS01495 PF07947 YhhN family F3090_RS01500 PF10694 Protein of unknown function (DUF2500) F3090_RS01505 PF06611 Protein of unknown function (DUF1145) F3090_RS01515 PF02881 SRP54-type protein, helical bundle domain F3090_RS01515 PF00448 SRP54-type protein, GTPase domain F3090_RS01520 PF00005 ABC transporter F3090_RS01525 PF02687 FtsX-like permease family F3090_RS01525 PF18075 FtsX extracellular domain F3090_RS01530 PF04542 Sigma-70 region 2 F3090_RS01530 PF04545 Sigma-70, region 4 F3090_RS01535 PF00392 Bacterial regulatory proteins, gntR family F3090_RS01535 PF00155 Aminotransferase class I and II F3090_RS01540 PF00202 Aminotransferase class-III F3090_RS01550 PF13458 Periplasmic binding protein F3090_RS01555 PF12568 Acetyltransferase (GNAT) domain, PanZ F3090_RS01560 PF13458 Periplasmic binding protein F3090_RS01565 PF02653 Branched-chain amino acid transport system / permease component F3090_RS01570 PF02653 Branched-chain amino acid transport system / permease component F3090_RS01570 PF11862 Domain of unknown function (DUF3382) F3090_RS01575 PF12399 Branched-chain amino acid ATP-binding cassette transporter F3090_RS01575 PF00005 ABC transporter F3090_RS01580 PF00005 ABC transporter F3090_RS01585 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system F3090_RS01595 PF13416 Bacterial extracellular solute-binding protein F3090_RS01600 PF00528 Binding-protein-dependent transport system inner membrane component F3090_RS01605 PF00528 Binding-protein-dependent transport system inner membrane component F3090_RS01610 PF17912 MalK OB fold domain F3090_RS01610 PF00005 ABC transporter F3090_RS01615 PF03009 Glycerophosphoryl diester phosphodiesterase family F3090_RS01620 PF10956 Protein of unknown function (DUF2756) F3090_RS01630 PF00583 Acetyltransferase (GNAT) family F3090_RS01640 PF02894 Oxidoreductase family, C-terminal alpha/beta domain F3090_RS01640 PF01408 Oxidoreductase family, NAD-binding Rossmann fold F3090_RS01645 PF17954 Quercetinase C-terminal cupin domain F3090_RS01645 PF02678 Pirin F3090_RS01650 PF00356 Bacterial regulatory proteins, lacI family F3090_RS01650 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family F3090_RS01655 PF01202 Shikimate kinase F3090_RS01660 PF02447 GntP family permease F3090_RS01670 PF02774 Semialdehyde dehydrogenase, dimerisation domain F3090_RS01670 PF01118 Semialdehyde dehydrogenase, NAD binding domain F3090_RS01675 PF00128 Alpha amylase, catalytic domain F3090_RS01675 PF02806 Alpha amylase, C-terminal all-beta domain F3090_RS01675 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) F3090_RS01680 PF18390 Glycogen debranching enzyme C-terminal domain F3090_RS01680 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) F3090_RS01680 PF00128 Alpha amylase, catalytic domain F3090_RS01685 PF00483 Nucleotidyl transferase F3090_RS01690 PF00534 Glycosyl transferases group 1 F3090_RS01690 PF08323 Starch synthase catalytic domain F3090_RS01695 PF00343 Carbohydrate phosphorylase F3090_RS01710 PF16901 C-terminal domain of alpha-glycerophosphate oxidase F3090_RS01710 PF01266 FAD dependent oxidoreductase F3090_RS01715 PF00581 Rhodanese-like domain F3090_RS01720 PF01694 Rhomboid family F3090_RS01720 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease F3090_RS01725 PF08220 DeoR-like helix-turn-helix domain F3090_RS01725 PF00455 DeoR C terminal sensor domain F3090_RS01735 PF00343 Carbohydrate phosphorylase F3090_RS01740 PF02446 4-alpha-glucanotransferase F3090_RS01745 PF02447 GntP family permease F3090_RS01750 PF01521 Iron-sulphur cluster biosynthesis F3090_RS01750 PF01106 NifU-like domain F3090_RS01755 PF00156 Phosphoribosyl transferase domain F3090_RS01760 PF00561 alpha/beta hydrolase fold F3090_RS01770 PF09012 FeoC like transcriptional regulator F3090_RS01775 PF02421 Ferrous iron transport protein B F3090_RS01775 PF07664 Ferrous iron transport protein B C terminus F3090_RS01775 PF17910 FeoB cytosolic helical domain F3090_RS01775 PF07670 Nucleoside recognition F3090_RS01780 PF04023 FeoA domain F3090_RS01785 PF00575 S1 RNA binding domain F3090_RS01785 PF09371 Tex-like protein N-terminal domain F3090_RS01785 PF16921 Tex protein YqgF-like domain F3090_RS01785 PF17674 HHH domain F3090_RS01790 PF01272 Transcription elongation factor, GreA/GreB, C-term F3090_RS01790 PF03449 Transcription elongation factor, N-terminal F3090_RS01795 PF00486 Transcriptional regulatory protein, C terminal F3090_RS01795 PF00072 Response regulator receiver domain F3090_RS01800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3090_RS01800 PF00672 HAMP domain F3090_RS01800 PF00512 His Kinase A (phospho-acceptor) domain F3090_RS01805 PF01293 Phosphoenolpyruvate carboxykinase F3090_RS01810 PF01430 Hsp33 protein F3090_RS01815 PF01479 S4 domain F3090_RS01820 PF13419 Haloacid dehalogenase-like hydrolase F3090_RS01825 PF07095 Intracellular growth attenuator protein IgaA F3090_RS01830 PF00293 NUDIX domain F3090_RS01835 PF17092 Penicillin-binding protein OB-like domain F3090_RS01835 PF00912 Transglycosylase F3090_RS01835 PF00905 Penicillin binding protein transpeptidase domain F3090_RS01860 PF00263 Bacterial type II and III secretion system protein F3090_RS01860 PF03958 Bacterial type II/III secretion system short domain F3090_RS01865 PF01202 Shikimate kinase F3090_RS01870 PF01761 3-dehydroquinate synthase F3090_RS01875 PF05036 Sporulation related domain F3090_RS01880 PF02086 D12 class N6 adenine-specific DNA methyltransferase F3090_RS01885 PF00834 Ribulose-phosphate 3 epimerase family F3090_RS01890 PF13419 Haloacid dehalogenase-like hydrolase F3090_RS01895 PF00579 tRNA synthetases class I (W and Y) F3090_RS01900 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases F3090_RS01900 PF10414 Sirohaem synthase dimerisation region F3090_RS01900 PF14824 Sirohaem biosynthesis protein central F3090_RS01905 PF13806 Rieske-like [2Fe-2S] domain F3090_RS01910 PF04324 BFD-like [2Fe-2S] binding domain F3090_RS01910 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain F3090_RS01910 PF07992 Pyridine nucleotide-disulphide oxidoreductase F3090_RS01910 PF01077 Nitrite and sulphite reductase 4Fe-4S domain F3090_RS01910 PF18267 Rubredoxin NAD+ reductase C-terminal domain F3090_RS01915 PF07969 Amidohydrolase family F3090_RS01920 PF07690 Major Facilitator Superfamily F3090_RS01925 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD F3090_RS01930 PF10832 Protein of unknown function (DUF2559) F3090_RS01935 PF02661 Fic/DOC family F3090_RS01940 PF00117 Glutamine amidotransferase class-I F3090_RS01945 PF00202 Aminotransferase class-III F3090_RS01950 PF12805 FUSC-like inner membrane protein yccS F3090_RS01955 PF13545 Crp-like helix-turn-helix domain F3090_RS01955 PF00027 Cyclic nucleotide-binding domain F3090_RS01960 PF02566 OsmC-like protein F3090_RS01965 PF00485 Phosphoribulokinase / Uridine kinase family F3090_RS01970 PF06794 Uncharacterised protein family (UPF0270) F3090_RS01975 PF00561 alpha/beta hydrolase fold F3090_RS01980 PF00005 ABC transporter F3090_RS01980 PF12848 ABC transporter F3090_RS01985 PF02525 Flavodoxin-like fold F3090_RS01990 PF02254 TrkA-N domain F3090_RS01990 PF00999 Sodium/hydrogen exchanger family F3090_RS01995 PF09526 Probable metal-binding protein (DUF2387) F3090_RS02000 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase F3090_RS02005 PF04102 SlyX F3090_RS02010 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase F3090_RS02010 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase F3090_RS02015 PF13309 HTH domain F3090_RS02015 PF08348 YheO-like PAS domain F3090_RS02020 PF02635 DsrE/DsrF-like family F3090_RS02025 PF02635 DsrE/DsrF-like family F3090_RS02030 PF04077 DsrH like protein F3090_RS02035 PF00164 Ribosomal protein S12/S23 F3090_RS02040 PF00177 Ribosomal protein S7p/S5e F3090_RS02045 PF03144 Elongation factor Tu domain 2 F3090_RS02045 PF00679 Elongation factor G C-terminus F3090_RS02045 PF00009 Elongation factor Tu GTP binding domain F3090_RS02045 PF03764 Elongation factor G, domain IV F3090_RS02045 PF14492 Elongation Factor G, domain II F3090_RS02050 PF00009 Elongation factor Tu GTP binding domain F3090_RS02050 PF03143 Elongation factor Tu C-terminal domain F3090_RS02050 PF03144 Elongation factor Tu domain 2 F3090_RS02055 PF04324 BFD-like [2Fe-2S] binding domain F3090_RS02060 PF00210 Ferritin-like domain F3090_RS02065 PF01478 Type IV leader peptidase family F3090_RS02070 PF00338 Ribosomal protein S10p/S20e F3090_RS02075 PF00297 Ribosomal protein L3 F3090_RS02080 PF00573 Ribosomal protein L4/L1 family F3090_RS02085 PF00276 Ribosomal protein L23 F3090_RS02090 PF03947 Ribosomal Proteins L2, C-terminal domain F3090_RS02090 PF00181 Ribosomal Proteins L2, RNA binding domain F3090_RS02095 PF00203 Ribosomal protein S19 F3090_RS02100 PF00237 Ribosomal protein L22p/L17e F3090_RS02105 PF00189 Ribosomal protein S3, C-terminal domain F3090_RS02105 PF07650 KH domain F3090_RS02110 PF00252 Ribosomal protein L16p/L10e F3090_RS02115 PF00831 Ribosomal L29 protein F3090_RS02120 PF00366 Ribosomal protein S17 F3090_RS02125 PF00238 Ribosomal protein L14p/L23e F3090_RS02130 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 F3090_RS02130 PF00467 KOW motif F3090_RS02135 PF00673 ribosomal L5P family C-terminus F3090_RS02135 PF00281 Ribosomal protein L5 F3090_RS02140 PF00253 Ribosomal protein S14p/S29e F3090_RS02145 PF00410 Ribosomal protein S8 F3090_RS02150 PF00347 Ribosomal protein L6 F3090_RS02155 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast F3090_RS02160 PF00333 Ribosomal protein S5, N-terminal domain F3090_RS02160 PF03719 Ribosomal protein S5, C-terminal domain F3090_RS02165 PF00327 Ribosomal protein L30p/L7e F3090_RS02170 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A F3090_RS02175 PF00344 SecY translocase F3090_RS02180 PF00444 Ribosomal protein L36 F3090_RS02185 PF00416 Ribosomal protein S13/S18 F3090_RS02190 PF00411 Ribosomal protein S11 F3090_RS02195 PF01479 S4 domain F3090_RS02195 PF00163 Ribosomal protein S4/S9 N-terminal domain F3090_RS02200 PF01000 RNA polymerase Rpb3/RpoA insert domain F3090_RS02200 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain F3090_RS02200 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain F3090_RS02205 PF01196 Ribosomal protein L17 F3090_RS02210 PF09350 Domain of unknown function (DUF1992) F3090_RS02215 PF13411 MerR HTH family regulatory protein F3090_RS02220 PF03889 Alternative ribosome-rescue factor A F3090_RS02225 PF01741 Large-conductance mechanosensitive channel, MscL F3090_RS02230 PF02254 TrkA-N domain F3090_RS02230 PF02080 TrkA-C domain F3090_RS02235 PF01029 NusB family F3090_RS02235 PF01189 16S rRNA methyltransferase RsmB/F F3090_RS02240 PF02911 Formyl transferase, C-terminal domain F3090_RS02240 PF00551 Formyl transferase F3090_RS02245 PF01327 Polypeptide deformylase F3090_RS02250 PF02481 DNA recombination-mediator protein A F3090_RS02250 PF17782 DprA winged helix domain F3090_RS02255 PF04361 Protein of unknown function (DUF494) F3090_RS02260 PF01396 Topoisomerase DNA binding C4 zinc finger F3090_RS02265 PF01300 Telomere recombination F3090_RS02270 PF08501 Shikimate dehydrogenase substrate binding domain F3090_RS02270 PF01488 Shikimate / quinate 5-dehydrogenase F3090_RS02270 PF18317 Shikimate 5'-dehydrogenase C-terminal domain F3090_RS02275 PF07369 Protein of unknown function (DUF1488) F3090_RS02280 PF00132 Bacterial transferase hexapeptide (six repeats) F3090_RS02320 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion F3090_RS02320 PF00529 HlyD membrane-fusion protein of T1SS F3090_RS02325 PF08361 MAATS-type transcriptional repressor, C-terminal region F3090_RS02325 PF00440 Bacterial regulatory proteins, tetR family F3090_RS02330 PF02954 Bacterial regulatory protein, Fis family F3090_RS02335 PF01207 Dihydrouridine synthase (Dus) F3090_RS02345 PF00474 Sodium:solute symporter family F3090_RS02350 PF06196 Protein of unknown function (DUF997) F3090_RS02355 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain F3090_RS02355 PF00289 Biotin carboxylase, N-terminal domain F3090_RS02355 PF02785 Biotin carboxylase C-terminal domain F3090_RS02360 PF00364 Biotin-requiring enzyme F3090_RS02365 PF01220 Dehydroquinase class II F3090_RS02370 PF01794 Ferric reductase like transmembrane component F3090_RS02375 PF00174 Oxidoreductase molybdopterin binding domain F3090_RS02385 PF00990 Diguanylate cyclase, GGDEF domain F3090_RS02385 PF00563 EAL domain F3090_RS02385 PF17157 Gammaproteobacterial periplasmic sensor domain F3090_RS02395 PF04085 rod shape-determining protein MreC F3090_RS02400 PF04093 rod shape-determining protein MreD F3090_RS02405 PF02545 Maf-like protein F3090_RS02410 PF10150 Ribonuclease E/G family F3090_RS02410 PF00575 S1 RNA binding domain F3090_RS02415 PF13502 AsmA-like C-terminal region F3090_RS02415 PF13116 Protein of unknown function F3090_RS02420 PF01523 Putative modulator of DNA gyrase F3090_RS02425 PF03466 LysR substrate binding domain F3090_RS02425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3090_RS02430 PF07869 Protein of unknown function (DUF1656) F3090_RS02435 PF13533 Biotin-lipoyl like F3090_RS02440 PF04632 Fusaric acid resistance protein family F3090_RS02445 PF01337 Barstar (barnase inhibitor) F3090_RS02450 PF07338 Protein of unknown function (DUF1471) F3090_RS02455 PF07338 Protein of unknown function (DUF1471) F3090_RS02460 PF01316 Arginine repressor, DNA binding domain F3090_RS02460 PF02863 Arginine repressor, C-terminal domain F3090_RS02465 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain F3090_RS02465 PF00056 lactate/malate dehydrogenase, NAD binding domain F3090_RS02470 PF13180 PDZ domain F3090_RS02475 PF13180 PDZ domain F3090_RS02475 PF00595 PDZ domain F3090_RS02480 PF06295 Protein of unknown function (DUF1043) F3090_RS02485 PF03969 AFG1-like ATPase F3090_RS02490 PF00572 Ribosomal protein L13 F3090_RS02495 PF00380 Ribosomal protein S9/S16 F3090_RS02500 PF00043 Glutathione S-transferase, C-terminal domain F3090_RS02500 PF02798 Glutathione S-transferase, N-terminal domain F3090_RS02505 PF04386 Stringent starvation protein B F3090_RS02510 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase F3090_RS02515 PF07992 Pyridine nucleotide-disulphide oxidoreductase F3090_RS02515 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster F3090_RS02520 PF01493 GXGXG motif F3090_RS02520 PF01645 Conserved region in glutamate synthase F3090_RS02520 PF04898 Glutamate synthase central domain F3090_RS02520 PF00310 Glutamine amidotransferases class-II F3090_RS02525 PF16199 Radical_SAM C-terminal domain F3090_RS02525 PF04055 Radical SAM superfamily F3090_RS02530 PF07690 Major Facilitator Superfamily F3090_RS02535 PF00107 Zinc-binding dehydrogenase F3090_RS02535 PF08240 Alcohol dehydrogenase GroES-like domain F3090_RS02540 PF03786 D-mannonate dehydratase (UxuA) F3090_RS02545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3090_RS02545 PF00512 His Kinase A (phospho-acceptor) domain F3090_RS02545 PF18415 Histidine kinase receptor ArcB trans-membrane domain F3090_RS02545 PF01627 Hpt domain F3090_RS02545 PF00072 Response regulator receiver domain F3090_RS02545 PF00989 PAS fold F3090_RS02555 PF00912 Transglycosylase F3090_RS02560 PF00381 PTS HPr component phosphorylation site F3090_RS02565 PF03668 P-loop ATPase protein family F3090_RS02570 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 F3090_RS02575 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein F3090_RS02580 PF04552 Sigma-54, DNA binding domain F3090_RS02580 PF00309 Sigma-54 factor, Activator interacting domain (AID) F3090_RS02580 PF04963 Sigma-54 factor, core binding domain F3090_RS02585 PF12399 Branched-chain amino acid ATP-binding cassette transporter F3090_RS02585 PF00005 ABC transporter F3090_RS02590 PF03968 OstA-like protein F3090_RS02595 PF06835 Lipopolysaccharide-assembly, LptC-related F3090_RS02605 PF01380 SIS domain F3090_RS02605 PF00571 CBS domain F3090_RS02610 PF01699 Sodium/calcium exchanger protein F3090_RS02615 PF00005 ABC transporter F3090_RS02620 PF02405 Permease MlaE F3090_RS02625 PF02470 MlaD protein F3090_RS02630 PF05494 MlaC protein F3090_RS02635 PF13466 STAS domain F3090_RS02640 PF01722 BolA-like protein F3090_RS02645 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) F3090_RS02650 PF13693 Winged helix-turn-helix DNA-binding F3090_RS02655 PF00348 Polyprenyl synthetase F3090_RS02660 PF00829 Ribosomal prokaryotic L21 protein F3090_RS02665 PF01016 Ribosomal L27 protein F3090_RS02670 PF00892 EamA-like transporter family F3090_RS02675 PF01018 GTP1/OBG F3090_RS02675 PF01926 50S ribosome-binding GTPase F3090_RS02680 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family F3090_RS02685 PF03449 Transcription elongation factor, N-terminal F3090_RS02685 PF01272 Transcription elongation factor, GreA/GreB, C-term F3090_RS02690 PF01985 CRS1 / YhbY (CRM) domain F3090_RS02695 PF01728 FtsJ-like methyltransferase F3090_RS02700 PF00004 ATPase family associated with various cellular activities (AAA) F3090_RS02700 PF06480 FtsH Extracellular F3090_RS02700 PF17862 AAA+ lid domain F3090_RS02700 PF01434 Peptidase family M41 F3090_RS02705 PF00809 Pterin binding enzyme F3090_RS02710 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain F3090_RS02710 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I F3090_RS02710 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II F3090_RS02710 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III F3090_RS02715 PF03840 Preprotein translocase SecG subunit F3090_RS02730 PF07437 YfaZ precursor F3090_RS02735 PF15977 Winged helix-turn-helix DNA binding F3090_RS02740 PF00764 Arginosuccinate synthase F3090_RS02750 PF02576 RimP N-terminal domain F3090_RS02750 PF17384 RimP C-terminal SH3 domain F3090_RS02755 PF08529 NusA N-terminal domain F3090_RS02755 PF00575 S1 RNA binding domain F3090_RS02755 PF13184 NusA-like KH domain F3090_RS02760 PF11987 Translation-initiation factor 2 F3090_RS02760 PF08364 Bacterial translation initiation factor IF-2 associated region F3090_RS02760 PF00009 Elongation factor Tu GTP binding domain F3090_RS02760 PF04760 Translation initiation factor IF-2, N-terminal region F3090_RS02765 PF02033 Ribosome-binding factor A F3090_RS02770 PF01509 TruB family pseudouridylate synthase (N terminal domain) F3090_RS02770 PF16198 tRNA pseudouridylate synthase B C-terminal domain F3090_RS02770 PF09157 Pseudouridine synthase II TruB, C-terminal F3090_RS02775 PF00312 Ribosomal protein S15 F3090_RS02780 PF01138 3' exoribonuclease family, domain 1 F3090_RS02780 PF00013 KH domain F3090_RS02780 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain F3090_RS02780 PF03725 3' exoribonuclease family, domain 2 F3090_RS02780 PF00575 S1 RNA binding domain F3090_RS02785 PF07719 Tetratricopeptide repeat F3090_RS02785 PF13181 Tetratricopeptide repeat F3090_RS02795 PF00270 DEAD/DEAH box helicase F3090_RS02795 PF03880 DbpA RNA binding domain F3090_RS02795 PF00271 Helicase conserved C-terminal domain F3090_RS02795 PF12343 Cold shock protein DEAD box A F3090_RS02800 PF03222 Tryptophan/tyrosine permease family F3090_RS02805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3090_RS02805 PF03466 LysR substrate binding domain F3090_RS02825 PF02785 Biotin carboxylase C-terminal domain F3090_RS02825 PF00289 Biotin carboxylase, N-terminal domain F3090_RS02825 PF00364 Biotin-requiring enzyme F3090_RS02825 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain F3090_RS02825 PF00682 HMGL-like F3090_RS02825 PF02436 Conserved carboxylase domain F3090_RS02845 PF01039 Carboxyl transferase domain F3090_RS02850 PF06857 Malonate decarboxylase delta subunit (MdcD) F3090_RS02855 PF16957 Malonate decarboxylase, alpha subunit, transporter F3090_RS02860 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit F3090_RS02865 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase F3090_RS02870 PF00296 Luciferase-like monooxygenase F3090_RS02875 PF01136 Peptidase family U32 F3090_RS02880 PF01136 Peptidase family U32 F3090_RS02885 PF02036 SCP-2 sterol transfer family F3090_RS02890 PF13508 Acetyltransferase (GNAT) domain F3090_RS02895 PF01541 GIY-YIG catalytic domain F3090_RS02905 PF01965 DJ-1/PfpI family F3090_RS02910 PF13460 NAD(P)H-binding F3090_RS02915 PF03773 Predicted permease F3090_RS02920 PF04972 BON domain F3090_RS02925 PF13580 SIS domain F3090_RS02930 PF02021 Uncharacterised protein family UPF0102 F3090_RS02935 PF04348 LppC putative lipoprotein F3090_RS02940 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases F3090_RS02945 PF08666 SAF domain F3090_RS02945 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus F3090_RS02950 PF07690 Major Facilitator Superfamily F3090_RS02955 PF03328 HpcH/HpaI aldolase/citrate lyase family F3090_RS02960 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase F3090_RS02960 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase F3090_RS02965 PF02595 Glycerate kinase family F3090_RS02990 PF02678 Pirin F3090_RS02990 PF17954 Quercetinase C-terminal cupin domain F3090_RS02995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3090_RS02995 PF03466 LysR substrate binding domain F3090_RS03000 PF05656 Protein of unknown function (DUF805) F3090_RS03005 PF13409 Glutathione S-transferase, N-terminal domain F3090_RS03010 PF07681 DoxX F3090_RS03015 PF13997 YqjK-like protein F3090_RS03020 PF07332 Putative Actinobacterial Holin-X, holin superfamily III F3090_RS03025 PF05957 Bacterial protein of unknown function (DUF883) F3090_RS03030 PF06476 Protein of unknown function (DUF1090) F3090_RS03035 PF13721 SecD export protein N-terminal TM region F3090_RS03040 PF09335 SNARE associated Golgi protein F3090_RS03045 PF07729 FCD domain F3090_RS03045 PF00392 Bacterial regulatory proteins, gntR family F3090_RS03050 PF07690 Major Facilitator Superfamily F3090_RS03055 PF02614 Glucuronate isomerase F3090_RS03060 PF08666 SAF domain F3090_RS03060 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus F3090_RS03065 PF10688 Bacterial inner membrane protein F3090_RS03070 PF00375 Sodium:dicarboxylate symporter family F3090_RS03075 PF03741 Integral membrane protein TerC family F3090_RS03080 PF01408 Oxidoreductase family, NAD-binding Rossmann fold F3090_RS03085 PF01863 Protein of unknown function DUF45 F3090_RS03100 PF05175 Methyltransferase small domain F3090_RS03105 PF07992 Pyridine nucleotide-disulphide oxidoreductase F3090_RS03105 PF00724 NADH:flavin oxidoreductase / NADH oxidase family F3090_RS03110 PF02782 FGGY family of carbohydrate kinases, C-terminal domain F3090_RS03110 PF00370 FGGY family of carbohydrate kinases, N-terminal domain F3090_RS03115 PF04198 Putative sugar-binding domain F3090_RS03120 PF00005 ABC transporter F3090_RS03125 PF02653 Branched-chain amino acid transport system / permease component F3090_RS03130 PF02653 Branched-chain amino acid transport system / permease component F3090_RS03135 PF13407 Periplasmic binding protein domain F3090_RS03140 PF01791 DeoC/LacD family aldolase F3090_RS03145 PF03992 Antibiotic biosynthesis monooxygenase F3090_RS03150 PF00202 Aminotransferase class-III F3090_RS03155 PF03551 Transcriptional regulator PadR-like family F3090_RS03160 PF04954 Siderophore-interacting protein F3090_RS03160 PF08021 Siderophore-interacting FAD-binding domain F3090_RS03165 PF02734 DAK2 domain F3090_RS03165 PF02733 Dak1 domain F3090_RS03170 PF00381 PTS HPr component phosphorylation site F3090_RS03170 PF00391 PEP-utilising enzyme, mobile domain F3090_RS03170 PF05524 PEP-utilising enzyme, N-terminal F3090_RS03170 PF03610 PTS system fructose IIA component F3090_RS03175 PF02734 DAK2 domain F3090_RS03180 PF02733 Dak1 domain F3090_RS03190 PF00465 Iron-containing alcohol dehydrogenase F3090_RS03195 PF00158 Sigma-54 interaction domain F3090_RS03195 PF02954 Bacterial regulatory protein, Fis family F3090_RS03195 PF00989 PAS fold F3090_RS03200 PF01923 Cobalamin adenosyltransferase F3090_RS03205 PF02288 Dehydratase medium subunit F3090_RS03210 PF00465 Iron-containing alcohol dehydrogenase F3090_RS03215 PF03928 Haem-degrading F3090_RS03220 PF02286 Dehydratase large subunit F3090_RS03225 PF02288 Dehydratase medium subunit F3090_RS03230 PF02287 Dehydratase small subunit F3090_RS03235 PF18427 DD-reactivating factor swiveling domain F3090_RS03235 PF08841 Diol dehydratase reactivase ATPase-like domain F3090_RS03240 PF00230 Major intrinsic protein F3090_RS03245 PF06411 HdeA/HdeB family F3090_RS03250 PF03729 Short repeat of unknown function (DUF308) F3090_RS03255 PF10938 YfdX protein F3090_RS03260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3090_RS03260 PF01627 Hpt domain F3090_RS03260 PF00072 Response regulator receiver domain F3090_RS03260 PF00497 Bacterial extracellular solute-binding proteins, family 3 F3090_RS03260 PF00512 His Kinase A (phospho-acceptor) domain F3090_RS03265 PF00196 Bacterial regulatory proteins, luxR family F3090_RS03265 PF00072 Response regulator receiver domain F3090_RS03285 PF03167 Uracil DNA glycosylase superfamily F3090_RS03290 PF04539 Sigma-70 region 3 F3090_RS03290 PF04545 Sigma-70, region 4 F3090_RS03290 PF00140 Sigma-70 factor, region 1.2 F3090_RS03290 PF03979 Sigma-70 factor, region 1.1 F3090_RS03290 PF04542 Sigma-70 region 2 F3090_RS03290 PF04546 Sigma-70, non-essential region F3090_RS03295 PF01807 CHC2 zinc finger F3090_RS03295 PF08278 DNA primase DnaG DnaB-binding F3090_RS03295 PF10410 DnaB-helicase binding domain of primase F3090_RS03295 PF08275 DNA primase catalytic core, N-terminal domain F3090_RS03300 PF01165 Ribosomal protein S21 F3090_RS03305 PF00814 Glycoprotease family F3090_RS03315 PF02492 CobW/HypB/UreG, nucleotide-binding domain F3090_RS03320 PF01730 UreF F3090_RS03325 PF02814 UreE urease accessory protein, N-terminal domain F3090_RS03325 PF05194 UreE urease accessory protein, C-terminal domain F3090_RS03330 PF00449 Urease alpha-subunit, N-terminal domain F3090_RS03330 PF01979 Amidohydrolase family F3090_RS03335 PF00699 Urease beta subunit F3090_RS03340 PF00547 Urease, gamma subunit F3090_RS03345 PF01774 UreD urease accessory protein F3090_RS03360 PF02660 Glycerol-3-phosphate acyltransferase F3090_RS03365 PF02152 Dihydroneopterin aldolase F3090_RS03370 PF02673 Bacitracin resistance protein BacA F3090_RS03375 PF01743 Poly A polymerase head domain F3090_RS03375 PF01966 HD domain F3090_RS03375 PF12627 Probable RNA and SrmB- binding site of polymerase A F3090_RS03380 PF08239 Bacterial SH3 domain F3090_RS03385 PF01928 CYTH domain F3090_RS03390 PF03710 Glutamate-ammonia ligase adenylyltransferase F3090_RS03390 PF08335 GlnD PII-uridylyltransferase F3090_RS03395 PF00294 pfkB family carbohydrate kinase F3090_RS03395 PF01467 Cytidylyltransferase-like F3090_RS03405 PF08971 Glycogen synthesis protein F3090_RS03410 PF04380 Membrane fusogenic activity F3090_RS03415 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase F3090_RS03420 PF02535 ZIP Zinc transporter F3090_RS03425 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase F3090_RS03430 PF03738 Glutathionylspermidine synthase preATP-grasp F3090_RS03435 PF06693 Protein of unknown function (DUF1190) F3090_RS03440 PF02321 Outer membrane efflux protein F3090_RS03445 PF00293 NUDIX domain F3090_RS03450 PF06853 Protein of unknown function (DUF1249) F3090_RS03455 PF00149 Calcineurin-like phosphoesterase F3090_RS03460 PF05728 Uncharacterised protein family (UPF0227) F3090_RS03465 PF01751 Toprim domain F3090_RS03465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3090_RS03465 PF00204 DNA gyrase B F3090_RS03465 PF00986 DNA gyrase B subunit, carboxyl terminus F3090_RS03470 PF03992 Antibiotic biosynthesis monooxygenase F3090_RS03475 PF02525 Flavodoxin-like fold F3090_RS03480 PF08521 Two-component sensor kinase N-terminal F3090_RS03480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3090_RS03480 PF00512 His Kinase A (phospho-acceptor) domain F3090_RS03485 PF00486 Transcriptional regulatory protein, C terminal F3090_RS03485 PF00072 Response regulator receiver domain F3090_RS03490 PF04076 Bacterial OB fold (BOF) protein F3090_RS03495 PF06445 GyrI-like small molecule binding domain F3090_RS03500 PF00521 DNA gyrase/topoisomerase IV, subunit A F3090_RS03500 PF03989 DNA gyrase C-terminal domain, beta-propeller F3090_RS03505 PF01553 Acyltransferase F3090_RS03510 PF00394 Multicopper oxidase F3090_RS03510 PF07731 Multicopper oxidase F3090_RS03510 PF07732 Multicopper oxidase F3090_RS03515 PF08497 Radical SAM N-terminal F3090_RS03515 PF11842 Domain of unknown function (DUF3362) F3090_RS03515 PF04055 Radical SAM superfamily F3090_RS03525 PF00248 Aldo/keto reductase family F3090_RS03535 PF05717 IS66 Orf2 like protein F3090_RS03540 PF13007 Transposase C of IS166 homeodomain F3090_RS03540 PF13005 zinc-finger binding domain of transposase IS66 F3090_RS03540 PF13817 IS66 C-terminal element F3090_RS03540 PF03050 Transposase IS66 family F3090_RS03545 PF00465 Iron-containing alcohol dehydrogenase F3090_RS03550 PF06719 AraC-type transcriptional regulator N-terminus F3090_RS03550 PF12833 Helix-turn-helix domain F3090_RS03555 PF09335 SNARE associated Golgi protein F3090_RS03560 PF01053 Cys/Met metabolism PLP-dependent enzyme F3090_RS03565 PF01618 MotA/TolQ/ExbB proton channel family F3090_RS03570 PF02472 Biopolymer transport protein ExbD/TolR F3090_RS03580 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain F3090_RS03580 PF04616 Glycosyl hydrolases family 43 F3090_RS03585 PF03350 Uncharacterized protein family, UPF0114 F3090_RS03590 PF01738 Dienelactone hydrolase family F3090_RS03595 PF11115 Protein of unknown function (DUF2623) F3090_RS03600 PF02798 Glutathione S-transferase, N-terminal domain F3090_RS03615 PF03738 Glutathionylspermidine synthase preATP-grasp F3090_RS03615 PF05257 CHAP domain F3090_RS03620 PF00155 Aminotransferase class I and II F3090_RS03640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3090_RS03640 PF03466 LysR substrate binding domain F3090_RS03645 PF01053 Cys/Met metabolism PLP-dependent enzyme F3090_RS03650 PF00291 Pyridoxal-phosphate dependent enzyme F3090_RS03650 PF00571 CBS domain F3090_RS03675 PF13737 Transposase DDE domain F3090_RS03695 PF13693 Winged helix-turn-helix DNA-binding F3090_RS03705 PF00589 Phage integrase family F3090_RS03705 PF13356 Arm DNA-binding domain F3090_RS03715 PF04474 Protein of unknown function (DUF554) F3090_RS03720 PF01276 Orn/Lys/Arg decarboxylase, major domain F3090_RS03720 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain F3090_RS03720 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain F3090_RS03725 PF03825 Nucleoside H+ symporter F3090_RS03730 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain F3090_RS03730 PF01464 Transglycosylase SLT domain F3090_RS03735 PF04362 Bacterial Fe(2+) trafficking F3090_RS03740 PF10576 Iron-sulfur binding domain of endonuclease III F3090_RS03740 PF00730 HhH-GPD superfamily base excision DNA repair protein F3090_RS03740 PF14815 NUDIX domain F3090_RS03740 PF00633 Helix-hairpin-helix motif F3090_RS03745 PF02390 Putative methyltransferase F3090_RS03750 PF04320 Protein with unknown function (DUF469) F3090_RS03755 PF11101 Protein of unknown function (DUF2884) F3090_RS03760 PF06969 HemN C-terminal domain F3090_RS03760 PF04055 Radical SAM superfamily F3090_RS03765 PF01725 Ham1 family F3090_RS03770 PF02594 Uncharacterised ACR, YggU family COG1872 F3090_RS03775 PF02325 YGGT family F3090_RS03780 PF01168 Alanine racemase, N-terminal domain F3090_RS03785 PF00437 Type II/IV secretion system protein F3090_RS03790 PF00196 Bacterial regulatory proteins, luxR family F3090_RS03795 PF03652 Holliday junction resolvase F3090_RS03800 PF02622 Uncharacterized ACR, COG1678 F3090_RS03805 PF02951 Prokaryotic glutathione synthetase, N-terminal domain F3090_RS03805 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain F3090_RS03810 PF04452 RNA methyltransferase F3090_RS03815 PF04231 Endonuclease I F3090_RS03820 PF17283 SprT-like zinc ribbon domain F3090_RS03820 PF10263 SprT-like family F3090_RS03825 PF00083 Sugar (and other) transporter F3090_RS03830 PF00438 S-adenosylmethionine synthetase, N-terminal domain F3090_RS03830 PF02772 S-adenosylmethionine synthetase, central domain F3090_RS03830 PF02773 S-adenosylmethionine synthetase, C-terminal domain F3090_RS03845 PF17810 Arginine decarboxylase helical bundle domain F3090_RS03845 PF17944 Arginine decarboxylase C-terminal helical extension F3090_RS03845 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain F3090_RS03850 PF00491 Arginase family F3090_RS03855 PF03573 outer membrane porin, OprD family F3090_RS03860 PF01435 Peptidase family M48 F3090_RS03865 PF00456 Transketolase, thiamine diphosphate binding domain F3090_RS03865 PF02780 Transketolase, C-terminal domain F3090_RS03865 PF02779 Transketolase, pyrimidine binding domain F3090_RS03870 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain F3090_RS03870 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain F3090_RS03875 PF00162 Phosphoglycerate kinase F3090_RS03880 PF01116 Fructose-bisphosphate aldolase class-II F3090_RS03885 PF00924 Mechanosensitive ion channel F3090_RS03885 PF05552 Conserved TM helix F3090_RS03890 PF01810 LysE type translocator F3090_RS03895 PF04402 Protein of unknown function (DUF541) F3090_RS03900 PF03466 LysR substrate binding domain F3090_RS03900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3090_RS03905 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) F3090_RS03910 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain F3090_RS03910 PF01842 ACT domain F3090_RS03910 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain F3090_RS03915 PF01812 5-formyltetrahydrofolate cyclo-ligase family F3090_RS03925 PF05164 Cell division protein ZapA F3090_RS03930 PF03695 Uncharacterised protein family (UPF0149) F3090_RS03935 PF05195 Aminopeptidase P, N-terminal domain F3090_RS03935 PF00557 Metallopeptidase family M24 F3090_RS03940 PF01494 FAD binding domain F3090_RS03945 PF01494 FAD binding domain F3090_RS03950 PF08669 Glycine cleavage T-protein C-terminal barrel domain F3090_RS03950 PF01571 Aminomethyltransferase folate-binding domain F3090_RS03955 PF01597 Glycine cleavage H-protein F3090_RS03960 PF02347 Glycine cleavage system P-protein F3090_RS03970 PF00578 AhpC/TSA family F3090_RS03990 PF00232 Glycosyl hydrolase family 1 F3090_RS03995 PF01418 Helix-turn-helix domain, rpiR family F3090_RS03995 PF01380 SIS domain F3090_RS04000 PF04266 ASCH domain F3090_RS04005 PF03006 Haemolysin-III related F3090_RS04010 PF01571 Aminomethyltransferase folate-binding domain F3090_RS04015 PF03937 Flavinator of succinate dehydrogenase F3090_RS04020 PF07254 Membrane-bound toxin component of toxin-antitoxin system F3090_RS04025 PF00258 Flavodoxin F3090_RS04030 PF00589 Phage integrase family F3090_RS04030 PF02899 Phage integrase, N-terminal SAM-like domain F3090_RS04035 PF10411 Disulfide bond isomerase protein N-terminus F3090_RS04035 PF13098 Thioredoxin-like domain F3090_RS04040 PF01368 DHH family F3090_RS04040 PF02272 DHHA1 domain F3090_RS04040 PF17768 RecJ OB domain F3090_RS04050 PF00152 tRNA synthetases class II (D, K and N) F3090_RS04050 PF01336 OB-fold nucleic acid binding domain F3090_RS04055 PF00293 NUDIX domain F3090_RS04060 PF01551 Peptidase family M23 F3090_RS04060 PF01476 LysM domain F3090_RS04070 PF07690 Major Facilitator Superfamily F3090_RS04075 PF03466 LysR substrate binding domain F3090_RS04075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3090_RS04085 PF00248 Aldo/keto reductase family F3090_RS04090 PF02525 Flavodoxin-like fold F3090_RS04100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3090_RS04100 PF03466 LysR substrate binding domain F3090_RS04115 PF01022 Bacterial regulatory protein, arsR family F3090_RS04120 PF02040 Arsenical pump membrane protein F3090_RS04125 PF03960 ArsC family F3090_RS04130 PF00854 POT family F3090_RS04135 PF08986 Domain of unknown function (DUF1889) F3090_RS04140 PF02321 Outer membrane efflux protein F3090_RS04145 PF04632 Fusaric acid resistance protein family F3090_RS04150 PF00529 HlyD membrane-fusion protein of T1SS F3090_RS04150 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion F3090_RS04155 PF17090 Uncharacterised protein family F3090_RS04160 PF06902 Divergent 4Fe-4S mono-cluster F3090_RS04165 PF14542 GCN5-related N-acetyl-transferase F3090_RS04175 PF09160 FimH, mannose binding F3090_RS04175 PF00419 Fimbrial protein F3090_RS04185 PF00419 Fimbrial protein F3090_RS04190 PF00577 Outer membrane usher protein F3090_RS04190 PF13954 PapC N-terminal domain F3090_RS04190 PF13953 PapC C-terminal domain F3090_RS04195 PF02753 Pili assembly chaperone PapD, C-terminal domain F3090_RS04195 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain F3090_RS04200 PF00419 Fimbrial protein F3090_RS04205 PF00419 Fimbrial protein F3090_RS04210 PF00589 Phage integrase family F3090_RS04215 PF00589 Phage integrase family F3090_RS04220 PF03824 High-affinity nickel-transport protein F3090_RS04225 PF01047 MarR family F3090_RS04230 PF00892 EamA-like transporter family F3090_RS04240 PF00419 Fimbrial protein F3090_RS04245 PF02753 Pili assembly chaperone PapD, C-terminal domain F3090_RS04245 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain F3090_RS04250 PF13954 PapC N-terminal domain F3090_RS04250 PF13953 PapC C-terminal domain F3090_RS04250 PF00577 Outer membrane usher protein F3090_RS04255 PF00419 Fimbrial protein F3090_RS04270 PF00196 Bacterial regulatory proteins, luxR family F3090_RS04270 PF00072 Response regulator receiver domain F3090_RS04280 PF00248 Aldo/keto reductase family F3090_RS04285 PF03222 Tryptophan/tyrosine permease family F3090_RS04295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3090_RS04295 PF03466 LysR substrate binding domain F3090_RS04300 PF00108 Thiolase, N-terminal domain F3090_RS04300 PF02803 Thiolase, C-terminal domain F3090_RS04305 PF06178 Oligogalacturonate-specific porin protein (KdgM) F3090_RS04310 PF14583 Oligogalacturonate lyase F3090_RS04320 PF00083 Sugar (and other) transporter F3090_RS04325 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family F3090_RS04325 PF00356 Bacterial regulatory proteins, lacI family F3090_RS04335 PF01306 LacY proton/sugar symporter F3090_RS04340 PF08244 Glycosyl hydrolases family 32 C terminal F3090_RS04340 PF00251 Glycosyl hydrolases family 32 N-terminal domain F3090_RS04355 PF17912 MalK OB fold domain F3090_RS04355 PF00005 ABC transporter F3090_RS04360 PF00528 Binding-protein-dependent transport system inner membrane component F3090_RS04365 PF00528 Binding-protein-dependent transport system inner membrane component F3090_RS04370 PF16867 Dimethlysulfonioproprionate lyase F3090_RS04375 PF01177 Asp/Glu/Hydantoin racemase F3090_RS04380 PF03466 LysR substrate binding domain F3090_RS04380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3090_RS04385 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain F3090_RS04385 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain F3090_RS04390 PF00356 Bacterial regulatory proteins, lacI family F3090_RS04395 PF02378 Phosphotransferase system, EIIC F3090_RS04400 PF00232 Glycosyl hydrolase family 1 F3090_RS04405 PF07729 FCD domain F3090_RS04405 PF00392 Bacterial regulatory proteins, gntR family F3090_RS04415 PF00356 Bacterial regulatory proteins, lacI family F3090_RS04425 PF00501 AMP-binding enzyme F3090_RS04425 PF01553 Acyltransferase F3090_RS04430 PF07690 Major Facilitator Superfamily F3090_RS04435 PF00248 Aldo/keto reductase family F3090_RS04440 PF06004 Bacterial protein of unknown function (DUF903) F3090_RS04445 PF03741 Integral membrane protein TerC family F3090_RS04450 PF02976 DNA mismatch repair enzyme MutH F3090_RS04460 PF00293 NUDIX domain F3090_RS04465 PF02896 PEP-utilising enzyme, TIM barrel domain F3090_RS04465 PF00391 PEP-utilising enzyme, mobile domain F3090_RS04465 PF05524 PEP-utilising enzyme, N-terminal F3090_RS04465 PF01590 GAF domain F3090_RS04470 PF01790 Prolipoprotein diacylglyceryl transferase F3090_RS04475 PF00303 Thymidylate synthase F3090_RS04480 PF07963 Prokaryotic N-terminal methylation motif F3090_RS04485 PF07963 Prokaryotic N-terminal methylation motif F3090_RS04490 PF10713 Protein of unknown function (DUF2509) F3090_RS04495 PF12528 Type II secretion prepilin peptidase dependent protein C F3090_RS04495 PF07963 Prokaryotic N-terminal methylation motif F3090_RS04500 PF17946 RecC C-terminal domain F3090_RS04505 PF16187 Middle or third domain of peptidase_M16 F3090_RS04505 PF05193 Peptidase M16 inactive domain F3090_RS04505 PF00675 Insulinase (Peptidase family M16) F3090_RS04510 PF13361 UvrD-like helicase C-terminal domain F3090_RS04510 PF00580 UvrD/REP helicase N-terminal domain F3090_RS04510 PF12705 PD-(D/E)XK nuclease superfamily F3090_RS04515 PF13538 UvrD-like helicase C-terminal domain F3090_RS04525 PF00583 Acetyltransferase (GNAT) family F3090_RS04525 PF00696 Amino acid kinase family F3090_RS04530 PF11741 AMIN domain F3090_RS04530 PF01520 N-acetylmuramoyl-L-alanine amidase F3090_RS04535 PF00155 Aminotransferase class I and II F3090_RS04540 PF00288 GHMP kinases N terminal domain F3090_RS04545 PF00871 Acetokinase family F3090_RS04550 PF10662 Ethanolamine utilisation - propanediol utilisation F3090_RS04555 PF00936 BMC domain F3090_RS04565 PF13375 RnfC Barrel sandwich hybrid domain F3090_RS04565 PF13237 4Fe-4S dicluster domain F3090_RS04565 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit F3090_RS04565 PF10531 SLBB domain F3090_RS04570 PF00465 Iron-containing alcohol dehydrogenase F3090_RS04570 PF00171 Aldehyde dehydrogenase family F3090_RS04575 PF00171 Aldehyde dehydrogenase family F3090_RS04580 PF01923 Cobalamin adenosyltransferase F3090_RS04585 PF03319 Ethanolamine utilisation protein EutN/carboxysome F3090_RS04595 PF06130 Phosphate propanoyltransferase F3090_RS04600 PF00936 BMC domain F3090_RS04605 PF00936 BMC domain F3090_RS04615 PF08841 Diol dehydratase reactivase ATPase-like domain F3090_RS04615 PF18427 DD-reactivating factor swiveling domain F3090_RS04620 PF02287 Dehydratase small subunit F3090_RS04625 PF02288 Dehydratase medium subunit F3090_RS04630 PF02286 Dehydratase large subunit F3090_RS04635 PF00936 BMC domain F3090_RS04640 PF00936 BMC domain F3090_RS04645 PF00230 Major intrinsic protein F3090_RS04650 PF12833 Helix-turn-helix domain F3090_RS04650 PF10114 Sensory domain found in PocR F3090_RS04655 PF07685 CobB/CobQ-like glutamine amidotransferase domain F3090_RS04655 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain F3090_RS04660 PF03186 CobD/Cbib protein F3090_RS04665 PF02570 Precorrin-8X methylmutase F3090_RS04670 PF01888 CbiD F3090_RS04675 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases F3090_RS04680 PF05175 Methyltransferase small domain F3090_RS04685 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases F3090_RS04690 PF01890 Cobalamin synthesis G C-terminus F3090_RS04690 PF11760 Cobalamin synthesis G N-terminal F3090_RS04690 PF11761 Cobalamin biosynthesis central region F3090_RS04695 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases F3090_RS04700 PF02571 Precorrin-6x reductase CbiJ/CobK F3090_RS04705 PF06180 Cobalt chelatase (CbiK) F3090_RS04710 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases F3090_RS04715 PF01891 Cobalt uptake substrate-specific transmembrane region F3090_RS04720 PF02553 Cobalt transport protein component CbiN F3090_RS04725 PF02361 Cobalt transport protein F3090_RS04730 PF00005 ABC transporter F3090_RS04735 PF07685 CobB/CobQ-like glutamine amidotransferase domain F3090_RS04740 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase F3090_RS04745 PF02277 Phosphoribosyltransferase F3090_RS04765 PF06725 3D domain F3090_RS04765 PF03562 MltA specific insert domain F3090_RS04770 PF00899 ThiF family F3090_RS04775 PF02657 Fe-S metabolism associated domain F3090_RS04780 PF00266 Aminotransferase class-V F3090_RS04785 PF06004 Bacterial protein of unknown function (DUF903) F3090_RS04790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3090_RS04790 PF03466 LysR substrate binding domain F3090_RS04795 PF04241 Protein of unknown function (DUF423) F3090_RS04800 PF18125 RlmM ferredoxin-like domain F3090_RS04800 PF01728 FtsJ-like methyltransferase F3090_RS04805 PF00455 DeoR C terminal sensor domain F3090_RS04805 PF08220 DeoR-like helix-turn-helix domain F3090_RS04810 PF05025 RbsD / FucU transport protein family F3090_RS04815 PF02782 FGGY family of carbohydrate kinases, C-terminal domain F3090_RS04815 PF00370 FGGY family of carbohydrate kinases, N-terminal domain F3090_RS04820 PF02952 L-fucose isomerase, C-terminal domain F3090_RS04820 PF07881 L-fucose isomerase, first N-terminal domain F3090_RS04820 PF07882 L-fucose isomerase, second N-terminal domain F3090_RS04825 PF07690 Major Facilitator Superfamily F3090_RS04830 PF00596 Class II Aldolase and Adducin N-terminal domain F3090_RS04835 PF00465 Iron-containing alcohol dehydrogenase F3090_RS04840 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain F3090_RS04840 PF01367 5'-3' exonuclease, C-terminal SAM fold F3090_RS04845 PF00158 Sigma-54 interaction domain F3090_RS04855 PF00296 Luciferase-like monooxygenase F3090_RS04865 PF00296 Luciferase-like monooxygenase F3090_RS04870 PF00005 ABC transporter F3090_RS04875 PF00528 Binding-protein-dependent transport system inner membrane component F3090_RS04880 PF03180 NLPA lipoprotein F3090_RS04885 PF07690 Major Facilitator Superfamily F3090_RS04895 PF09084 NMT1/THI5 like F3090_RS04900 PF03315 Serine dehydratase beta chain F3090_RS04900 PF03313 Serine dehydratase alpha chain F3090_RS04910 PF11892 Domain of unknown function (DUF3412) F3090_RS04910 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases F3090_RS04910 PF03641 Possible lysine decarboxylase F3090_RS04915 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term F3090_RS04915 PF14489 QueF-like protein F3090_RS04920 PF07348 Syd protein (SUKH-2) F3090_RS04925 PF04287 tRNA pseudouridine synthase C F3090_RS04930 PF00849 RNA pseudouridylate synthase F3090_RS04935 PF00258 Flavodoxin F3090_RS04940 PF07690 Major Facilitator Superfamily F3090_RS04945 PF13378 Enolase C-terminal domain-like F3090_RS04945 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain F3090_RS04950 PF13378 Enolase C-terminal domain-like F3090_RS04955 PF02595 Glycerate kinase family F3090_RS04960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3090_RS04960 PF00672 HAMP domain F3090_RS04960 PF00512 His Kinase A (phospho-acceptor) domain F3090_RS04960 PF01627 Hpt domain F3090_RS04960 PF00072 Response regulator receiver domain F3090_RS04960 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) F3090_RS04965 PF05958 tRNA (Uracil-5-)-methyltransferase F3090_RS04965 PF01938 TRAM domain F3090_RS04970 PF02824 TGS domain F3090_RS04970 PF13291 ACT domain F3090_RS04970 PF04607 Region found in RelA / SpoT proteins F3090_RS04975 PF03819 MazG nucleotide pyrophosphohydrolase domain F3090_RS04980 PF06418 CTP synthase N-terminus F3090_RS04980 PF00117 Glutamine amidotransferase class-I F3090_RS04985 PF03952 Enolase, N-terminal domain F3090_RS04985 PF00113 Enolase, C-terminal TIM barrel domain F3090_RS04995 PF04055 Radical SAM superfamily F3090_RS05000 PF01242 6-pyruvoyl tetrahydropterin synthase F3090_RS05005 PF00175 Oxidoreductase NAD-binding domain F3090_RS05005 PF00667 FAD binding domain F3090_RS05005 PF00258 Flavodoxin F3090_RS05010 PF01077 Nitrite and sulphite reductase 4Fe-4S domain F3090_RS05010 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain F3090_RS05015 PF01507 Phosphoadenosine phosphosulfate reductase family F3090_RS05020 PF18019 HD domain F3090_RS05020 PF00271 Helicase conserved C-terminal domain F3090_RS05020 PF00270 DEAD/DEAH box helicase F3090_RS05025 PF09481 CRISPR-associated protein Cse1 (CRISPR_cse1) F3090_RS05035 PF09344 CT1975-like protein F3090_RS05040 PF09704 CRISPR-associated protein (Cas_Cas5) F3090_RS05050 PF01867 CRISPR associated protein Cas1 F3090_RS05055 PF09707 CRISPR-associated protein (Cas_Cas2CT1978) F3090_RS05070 PF04389 Peptidase family M28 F3090_RS05075 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases F3090_RS05075 PF14824 Sirohaem biosynthesis protein central F3090_RS05075 PF10414 Sirohaem synthase dimerisation region F3090_RS05080 PF01507 Phosphoadenosine phosphosulfate reductase family F3090_RS05085 PF00009 Elongation factor Tu GTP binding domain F3090_RS05095 PF12084 Protein of unknown function (DUF3561) F3090_RS05100 PF04977 Septum formation initiator F3090_RS05105 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase F3090_RS05110 PF02542 YgbB family F3090_RS05115 PF01142 tRNA pseudouridine synthase D (TruD) F3090_RS05120 PF01975 Survival protein SurE F3090_RS05130 PF01551 Peptidase family M23 F3090_RS05130 PF01476 LysM domain F3090_RS05135 PF04545 Sigma-70, region 4 F3090_RS05135 PF04539 Sigma-70 region 3 F3090_RS05135 PF04542 Sigma-70 region 2 F3090_RS05135 PF00140 Sigma-70 factor, region 1.2 F3090_RS05145 PF07690 Major Facilitator Superfamily F3090_RS05150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3090_RS05150 PF03466 LysR substrate binding domain F3090_RS05155 PF01047 MarR family F3090_RS05160 PF02441 Flavoprotein F3090_RS05165 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase F3090_RS05175 PF01848 Hok/gef family F3090_RS05180 PF05188 MutS domain II F3090_RS05180 PF01624 MutS domain I F3090_RS05180 PF05192 MutS domain III F3090_RS05180 PF05190 MutS family domain IV F3090_RS05180 PF00488 MutS domain V F3090_RS05200 PF00005 ABC transporter F3090_RS05205 PF01032 FecCD transport family F3090_RS05210 PF01497 Periplasmic binding protein F3090_RS05215 PF05171 Haemin-degrading HemS.ChuX domain F3090_RS05220 PF07715 TonB-dependent Receptor Plug Domain F3090_RS05220 PF00593 TonB dependent receptor F3090_RS05230 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain F3090_RS05230 PF00205 Thiamine pyrophosphate enzyme, central domain F3090_RS05230 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain F3090_RS05235 PF03547 Membrane transport protein F3090_RS05245 PF11756 Nitrous oxide-stimulated promoter F3090_RS05250 PF00950 ABC 3 transport family F3090_RS05255 PF00950 ABC 3 transport family F3090_RS05260 PF00005 ABC transporter F3090_RS05265 PF01297 Zinc-uptake complex component A periplasmic F3090_RS05270 PF00356 Bacterial regulatory proteins, lacI family F3090_RS05275 PF00480 ROK family F3090_RS05280 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit F3090_RS05285 PF02378 Phosphotransferase system, EIIC F3090_RS05290 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit F3090_RS05295 PF02378 Phosphotransferase system, EIIC F3090_RS05300 PF02264 LamB porin F3090_RS05310 PF00232 Glycosyl hydrolase family 1 F3090_RS05315 PF02954 Bacterial regulatory protein, Fis family F3090_RS05315 PF00158 Sigma-54 interaction domain F3090_RS05315 PF01590 GAF domain F3090_RS05320 PF02769 AIR synthase related protein, C-terminal domain F3090_RS05320 PF00586 AIR synthase related protein, N-terminal domain F3090_RS05325 PF01924 Hydrogenase formation hypA family F3090_RS05330 PF01455 HupF/HypC family F3090_RS05335 PF02492 CobW/HypB/UreG, nucleotide-binding domain F3090_RS05340 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA F3090_RS05345 PF11046 Transcriptional repressor of hyc and hyp operons F3090_RS05350 PF13247 4Fe-4S dicluster domain F3090_RS05355 PF00361 Proton-conducting membrane transporter F3090_RS05360 PF00146 NADH dehydrogenase F3090_RS05365 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit F3090_RS05365 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit F3090_RS05365 PF00374 Nickel-dependent hydrogenase F3090_RS05370 PF12838 4Fe-4S dicluster domain F3090_RS05375 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit F3090_RS05380 PF07450 Formate hydrogenlyase maturation protein HycH F3090_RS05385 PF01750 Hydrogenase maturation protease F3090_RS05390 PF08845 Toxin SymE, type I toxin-antitoxin system F3090_RS05395 PF00232 Glycosyl hydrolase family 1 F3090_RS05400 PF00367 phosphotransferase system, EIIB F3090_RS05400 PF02378 Phosphotransferase system, EIIC F3090_RS05405 PF00356 Bacterial regulatory proteins, lacI family F3090_RS05410 PF12800 4Fe-4S binding domain F3090_RS05410 PF13247 4Fe-4S dicluster domain F3090_RS05415 PF17788 HypF Kae1-like domain F3090_RS05415 PF00708 Acylphosphatase F3090_RS05415 PF07503 HypF finger F3090_RS05415 PF01300 Telomere recombination F3090_RS05420 PF03824 High-affinity nickel-transport protein F3090_RS05425 PF07992 Pyridine nucleotide-disulphide oxidoreductase F3090_RS05425 PF18113 Rubredoxin binding C-terminal domain F3090_RS05430 PF00258 Flavodoxin F3090_RS05430 PF00753 Metallo-beta-lactamase superfamily F3090_RS05430 PF00301 Rubredoxin F3090_RS05435 PF01590 GAF domain F3090_RS05435 PF00158 Sigma-54 interaction domain F3090_RS05440 PF01380 SIS domain F3090_RS05440 PF00571 CBS domain F3090_RS05445 PF00455 DeoR C terminal sensor domain F3090_RS05445 PF08220 DeoR-like helix-turn-helix domain F3090_RS05450 PF06923 Glucitol operon activator protein (GutM) F3090_RS05455 PF00106 short chain dehydrogenase F3090_RS05460 PF03829 PTS system glucitol/sorbitol-specific IIA component F3090_RS05465 PF07663 Sorbitol phosphotransferase enzyme II C-terminus F3090_RS05465 PF03612 Sorbitol phosphotransferase enzyme II N-terminus F3090_RS05470 PF03608 PTS system enzyme II sorbitol-specific factor F3090_RS05475 PF13406 Transglycosylase SLT domain F3090_RS05480 PF00005 ABC transporter F3090_RS05485 PF00950 ABC 3 transport family F3090_RS05490 PF01297 Zinc-uptake complex component A periplasmic F3090_RS05495 PF02464 Competence-damaged protein F3090_RS05500 PF00154 recA bacterial DNA recombination protein F3090_RS05505 PF02631 RecX family F3090_RS05510 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain F3090_RS05510 PF01411 tRNA synthetases class II (A) F3090_RS05510 PF02272 DHHA1 domain F3090_RS05515 PF02599 Global regulator protein family F3090_RS05545 PF04972 BON domain F3090_RS05550 PF13419 Haloacid dehalogenase-like hydrolase F3090_RS05555 PF09335 SNARE associated Golgi protein F3090_RS05560 PF04262 Glutamate-cysteine ligase F3090_RS05565 PF02664 S-Ribosylhomocysteinase (LuxS) F3090_RS05570 PF12833 Helix-turn-helix domain F3090_RS05570 PF12852 Cupin F3090_RS05575 PF00682 HMGL-like F3090_RS05575 PF08502 LeuA allosteric (dimerisation) domain F3090_RS05580 PF07690 Major Facilitator Superfamily F3090_RS05585 PF00529 HlyD membrane-fusion protein of T1SS F3090_RS05585 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion F3090_RS05590 PF01047 MarR family F3090_RS05595 PF05437 Branched-chain amino acid transport protein (AzlD) F3090_RS05600 PF03591 AzlC protein F3090_RS05605 PF04069 Substrate binding domain of ABC-type glycine betaine transport system F3090_RS05610 PF00528 Binding-protein-dependent transport system inner membrane component F3090_RS05615 PF00571 CBS domain F3090_RS05615 PF00005 ABC transporter F3090_RS05620 PF00268 Ribonucleotide reductase, small chain F3090_RS05625 PF08343 Ribonucleotide reductase N-terminal F3090_RS05625 PF00317 Ribonucleotide reductase, all-alpha domain F3090_RS05625 PF02867 Ribonucleotide reductase, barrel domain F3090_RS05630 PF07972 NrdI Flavodoxin like F3090_RS05635 PF00462 Glutaredoxin F3090_RS05640 PF02627 Carboxymuconolactone decarboxylase family F3090_RS05645 PF00155 Aminotransferase class I and II F3090_RS05645 PF00392 Bacterial regulatory proteins, gntR family F3090_RS05650 PF05957 Bacterial protein of unknown function (DUF883) F3090_RS05655 PF09400 Protein of unknown function (DUF2002) F3090_RS05660 PF06610 L-alanine exporter F3090_RS05665 PF00816 H-NS histone family F3090_RS05680 PF00581 Rhodanese-like domain F3090_RS05680 PF11127 Protein of unknown function (DUF2892) F3090_RS05685 PF01022 Bacterial regulatory protein, arsR family F3090_RS05690 PF02525 Flavodoxin-like fold F3090_RS05695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3090_RS05695 PF03466 LysR substrate binding domain F3090_RS05700 PF01590 GAF domain F3090_RS05700 PF02954 Bacterial regulatory protein, Fis family F3090_RS05700 PF00158 Sigma-54 interaction domain F3090_RS05705 PF00171 Aldehyde dehydrogenase family F3090_RS05710 PF16970 Type-1 fimbrial protein, A F3090_RS05715 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain F3090_RS05715 PF02753 Pili assembly chaperone PapD, C-terminal domain F3090_RS05720 PF00577 Outer membrane usher protein F3090_RS05720 PF13954 PapC N-terminal domain F3090_RS05720 PF13953 PapC C-terminal domain F3090_RS05730 PF02753 Pili assembly chaperone PapD, C-terminal domain F3090_RS05730 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain F3090_RS05750 PF00106 short chain dehydrogenase F3090_RS05755 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain F3090_RS05760 PF00596 Class II Aldolase and Adducin N-terminal domain F3090_RS05765 PF00005 ABC transporter F3090_RS05770 PF00497 Bacterial extracellular solute-binding proteins, family 3 F3090_RS05785 PF00491 Arginase family F3090_RS05790 PF03466 LysR substrate binding domain F3090_RS05790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3090_RS05800 PF00873 AcrB/AcrD/AcrF family F3090_RS05805 PF00529 HlyD membrane-fusion protein of T1SS F3090_RS05805 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion F3090_RS05810 PF06445 GyrI-like small molecule binding domain F3090_RS05810 PF12833 Helix-turn-helix domain F3090_RS05820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3090_RS05820 PF03466 LysR substrate binding domain F3090_RS05840 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) F3090_RS05870 PF13356 Arm DNA-binding domain F3090_RS05870 PF00589 Phage integrase family F3090_RS05880 PF00589 Phage integrase family F3090_RS05880 PF02899 Phage integrase, N-terminal SAM-like domain F3090_RS05885 PF16452 Bacteriophage CI repressor C-terminal domain F3090_RS05885 PF07022 Bacteriophage CI repressor helix-turn-helix domain F3090_RS05895 PF06892 Phage regulatory protein CII (CP76) F3090_RS05905 PF17282 Family of unknown function (DUF5347) F3090_RS05915 PF01258 Prokaryotic dksA/traR C4-type zinc finger F3090_RS05920 PF02086 D12 class N6 adenine-specific DNA methyltransferase F3090_RS05925 PF05840 Bacteriophage replication gene A protein (GPA) F3090_RS05930 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) F3090_RS06065 PF17482 Phage tail sheath C-terminal domain F3090_RS06065 PF04984 Phage tail sheath protein subtilisin-like domain F3090_RS06100 PF04606 Ogr/Delta-like zinc finger F3090_RS06115 PF01668 SmpB protein F3090_RS06120 PF03364 Polyketide cyclase / dehydrase and lipid transport F3090_RS06125 PF03658 RnfH family Ubiquitin F3090_RS06130 PF04355 SmpA / OmlA family F3090_RS06135 PF02463 RecF/RecN/SMC N terminal domain F3090_RS06140 PF01513 ATP-NAD kinase F3090_RS06145 PF01025 GrpE F3090_RS06150 PF00571 CBS domain F3090_RS06150 PF03471 Transporter associated domain F3090_RS06150 PF01595 Cyclin M transmembrane N-terminal domain F3090_RS06155 PF01578 Cytochrome C assembly protein F3090_RS06160 PF02881 SRP54-type protein, helical bundle domain F3090_RS06160 PF00448 SRP54-type protein, GTPase domain F3090_RS06160 PF02978 Signal peptide binding domain F3090_RS06165 PF00886 Ribosomal protein S16 F3090_RS06170 PF05239 PRC-barrel domain F3090_RS06170 PF01782 RimM N-terminal domain F3090_RS06175 PF01746 tRNA (Guanine-1)-methyltransferase F3090_RS06180 PF01245 Ribosomal protein L19 F3090_RS06185 PF04606 Ogr/Delta-like zinc finger F3090_RS06330 PF06183 DinI-like family F3090_RS06340 PF05840 Bacteriophage replication gene A protein (GPA) F3090_RS06350 PF01258 Prokaryotic dksA/traR C4-type zinc finger F3090_RS06360 PF17282 Family of unknown function (DUF5347) F3090_RS06370 PF06892 Phage regulatory protein CII (CP76) F3090_RS06405 PF00691 OmpA family F3090_RS06410 PF00990 Diguanylate cyclase, GGDEF domain F3090_RS06410 PF17152 Periplasmic sensor domain F3090_RS06415 PF13689 YfiR/HmsC-like F3090_RS06420 PF00793 DAHP synthetase I family F3090_RS06425 PF01817 Chorismate mutase type II F3090_RS06425 PF02153 Prephenate dehydrogenase F3090_RS06430 PF08450 SMP-30/Gluconolactonase/LRE-like region F3090_RS06435 PF01817 Chorismate mutase type II F3090_RS06435 PF00800 Prephenate dehydratase F3090_RS06445 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein F3090_RS06450 PF13525 Outer membrane lipoprotein F3090_RS06455 PF01479 S4 domain F3090_RS06455 PF00849 RNA pseudouridylate synthase F3090_RS06460 PF02578 Multi-copper polyphenol oxidoreductase laccase F3090_RS06465 PF10431 C-terminal, D2-small domain, of ClpB protein F3090_RS06465 PF02861 Clp amino terminal domain, pathogenicity island component F3090_RS06465 PF00004 ATPase family associated with various cellular activities (AAA) F3090_RS06465 PF17871 AAA lid domain F3090_RS06465 PF07724 AAA domain (Cdc48 subfamily) F3090_RS06490 PF00083 Sugar (and other) transporter F3090_RS06495 PF10043 Predicted periplasmic lipoprotein (DUF2279) F3090_RS06500 PF13091 PLD-like domain F3090_RS06505 PF13380 CoA binding domain F3090_RS06505 PF13607 Succinyl-CoA ligase like flavodoxin domain F3090_RS06505 PF00583 Acetyltransferase (GNAT) family F3090_RS06510 PF03942 DTW domain F3090_RS06515 PF00085 Thioredoxin F3090_RS06520 PF00588 SpoU rRNA Methylase family F3090_RS06520 PF08032 RNA 2'-O ribose methyltransferase substrate binding F3090_RS06525 PF03167 Uracil DNA glycosylase superfamily F3090_RS06530 PF01228 Glycine radical F3090_RS06535 PF00271 Helicase conserved C-terminal domain F3090_RS06535 PF00270 DEAD/DEAH box helicase F3090_RS06540 PF05175 Methyltransferase small domain F3090_RS06545 PF00890 FAD binding domain F3090_RS06545 PF02910 Fumarate reductase flavoprotein C-term F3090_RS06555 PF04542 Sigma-70 region 2 F3090_RS06555 PF08281 Sigma-70, region 4 F3090_RS06560 PF03873 Anti sigma-E protein RseA, C-terminal domain F3090_RS06560 PF03872 Anti sigma-E protein RseA, N-terminal domain F3090_RS06565 PF17188 MucB/RseB C-terminal domain F3090_RS06565 PF03888 MucB/RseB N-terminal domain F3090_RS06575 PF00679 Elongation factor G C-terminus F3090_RS06575 PF06421 GTP-binding protein LepA C-terminus F3090_RS06575 PF03144 Elongation factor Tu domain 2 F3090_RS06575 PF00009 Elongation factor Tu GTP binding domain F3090_RS06580 PF10502 Signal peptidase, peptidase S26 F3090_RS06585 PF00035 Double-stranded RNA binding motif F3090_RS06585 PF14622 Ribonuclease-III-like F3090_RS06590 PF07650 KH domain F3090_RS06590 PF01926 50S ribosome-binding GTPase F3090_RS06595 PF02565 Recombination protein O C terminal F3090_RS06595 PF11967 Recombination protein O N terminal F3090_RS06600 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ F3090_RS06605 PF01648 4'-phosphopantetheinyl transferase superfamily F3090_RS06610 PF12838 4Fe-4S dicluster domain F3090_RS06615 PF01380 SIS domain F3090_RS06615 PF01418 Helix-turn-helix domain, rpiR family F3090_RS06625 PF14437 MafB19-like deaminase F3090_RS06630 PF01464 Transglycosylase SLT domain F3090_RS06630 PF00497 Bacterial extracellular solute-binding proteins, family 3 F3090_RS06635 PF02769 AIR synthase related protein, C-terminal domain F3090_RS06635 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain F3090_RS06635 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal F3090_RS06640 PF00512 His Kinase A (phospho-acceptor) domain F3090_RS06640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3090_RS06645 PF13942 YfhG lipoprotein F3090_RS06650 PF00072 Response regulator receiver domain F3090_RS06650 PF00158 Sigma-54 interaction domain F3090_RS06655 PF00543 Nitrogen regulatory protein P-II F3090_RS06660 PF00970 Oxidoreductase FAD-binding domain F3090_RS06660 PF00175 Oxidoreductase NAD-binding domain F3090_RS06660 PF00042 Globin F3090_RS06665 PF00464 Serine hydroxymethyltransferase F3090_RS06670 PF07681 DoxX F3090_RS06675 PF00480 ROK family F3090_RS06680 PF13181 Tetratricopeptide repeat F3090_RS06680 PF17128 Domain of unknown function (DUF5107) F3090_RS06685 PF00083 Sugar (and other) transporter F3090_RS06690 PF01263 Aldose 1-epimerase F3090_RS06695 PF12832 MFS_1 like family F3090_RS06700 PF00874 PRD domain F3090_RS06705 PF06226 Protein of unknown function (DUF1007) F3090_RS06710 PF03824 High-affinity nickel-transport protein F3090_RS06720 PF00459 Inositol monophosphatase family F3090_RS06725 PF00588 SpoU rRNA Methylase family F3090_RS06730 PF02082 Transcriptional regulator F3090_RS06735 PF00266 Aminotransferase class-V F3090_RS06740 PF01592 NifU-like N terminal domain F3090_RS06745 PF01521 Iron-sulphur cluster biosynthesis F3090_RS06750 PF00226 DnaJ domain F3090_RS06750 PF07743 HSCB C-terminal oligomerisation domain F3090_RS06755 PF00012 Hsp70 protein F3090_RS06760 PF00111 2Fe-2S iron-sulfur cluster binding domain F3090_RS06765 PF04384 Iron-sulphur cluster assembly F3090_RS06770 PF00883 Cytosol aminopeptidase family, catalytic domain F3090_RS06770 PF12404 Peptidase F3090_RS06775 PF14581 SseB protein C-terminal domain F3090_RS06775 PF07179 SseB protein N-terminal domain F3090_RS06785 PF00581 Rhodanese-like domain F3090_RS06790 PF17962 Bacterial macroglobulin domain 6 F3090_RS06790 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain F3090_RS06790 PF07678 A-macroglobulin TED domain F3090_RS06790 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain F3090_RS06790 PF07703 Alpha-2-macroglobulin bait region domain F3090_RS06790 PF11974 Bacterial alpha-2-macroglobulin MG3 domain F3090_RS06790 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain F3090_RS06790 PF00207 Alpha-2-macroglobulin family F3090_RS06790 PF01835 MG2 domain F3090_RS06795 PF00905 Penicillin binding protein transpeptidase domain F3090_RS06795 PF06832 Penicillin-Binding Protein C-terminus Family F3090_RS06795 PF00912 Transglycosylase F3090_RS06800 PF00334 Nucleoside diphosphate kinase F3090_RS06805 PF04055 Radical SAM superfamily F3090_RS06810 PF13464 Domain of unknown function (DUF4115) F3090_RS06815 PF04551 GcpE protein F3090_RS06820 PF13393 Histidyl-tRNA synthetase F3090_RS06820 PF03129 Anticodon binding domain F3090_RS06825 PF09976 Tetratricopeptide repeat-like domain F3090_RS06830 PF13360 PQQ-like domain F3090_RS06835 PF01926 50S ribosome-binding GTPase F3090_RS06835 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal F3090_RS06845 PF07191 zinc-ribbons F3090_RS06850 PF02601 Exonuclease VII, large subunit F3090_RS06850 PF13742 OB-fold nucleic acid binding domain F3090_RS06855 PF00478 IMP dehydrogenase / GMP reductase domain F3090_RS06855 PF00571 CBS domain F3090_RS06860 PF02540 NAD synthase F3090_RS06860 PF00117 Glutamine amidotransferase class-I F3090_RS06860 PF00958 GMP synthase C terminal domain F3090_RS06865 PF00884 Sulfatase F3090_RS06870 PF13186 Iron-sulfur cluster-binding domain F3090_RS06870 PF04055 Radical SAM superfamily F3090_RS06880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3090_RS06880 PF03466 LysR substrate binding domain F3090_RS06885 PF11119 Protein of unknown function (DUF2633) F3090_RS06890 PF00563 EAL domain F3090_RS06890 PF05231 MASE1 F3090_RS06895 PF02541 Ppx/GppA phosphatase family F3090_RS06900 PF13089 Polyphosphate kinase N-terminal domain F3090_RS06900 PF02503 Polyphosphate kinase middle domain F3090_RS06900 PF13090 Polyphosphate kinase C-terminal domain 2 F3090_RS06900 PF17941 Polyphosphate kinase C-terminal domain 1 F3090_RS06905 PF00551 Formyl transferase F3090_RS06910 PF02769 AIR synthase related protein, C-terminal domain F3090_RS06910 PF00586 AIR synthase related protein, N-terminal domain F3090_RS06915 PF00480 ROK family F3090_RS06920 PF00232 Glycosyl hydrolase family 1 F3090_RS06930 PF00860 Permease family F3090_RS06935 PF00308 Bacterial dnaA protein F3090_RS06940 PF04754 Putative transposase, YhgA-like F3090_RS06945 PF03960 ArsC family F3090_RS06950 PF01435 Peptidase family M48 F3090_RS06960 PF01594 AI-2E family transporter F3090_RS06965 PF00578 AhpC/TSA family F3090_RS06970 PF01842 ACT domain F3090_RS06975 PF00701 Dihydrodipicolinate synthetase family F3090_RS06980 PF06804 NlpB/DapX lipoprotein F3090_RS06985 PF01259 SAICAR synthetase F3090_RS06990 PF04228 Putative neutral zinc metallopeptidase F3090_RS06995 PF05127 Helicase F3090_RS06995 PF13718 GNAT acetyltransferase 2 F3090_RS06995 PF08351 Domain of unknown function (DUF1726) F3090_RS06995 PF17176 tRNA-binding domain F3090_RS07000 PF02230 Phospholipase/Carboxylesterase F3090_RS07005 PF13980 Uncharacterised protein family (UPF0370) F3090_RS07010 PF07687 Peptidase dimerisation domain F3090_RS07010 PF01546 Peptidase family M20/M25/M40 F3090_RS07015 PF03960 ArsC family F3090_RS07030 PF13247 4Fe-4S dicluster domain F3090_RS07030 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster F3090_RS07030 PF07992 Pyridine nucleotide-disulphide oxidoreductase F3090_RS07035 PF00293 NUDIX domain F3090_RS07040 PF06674 Protein of unknown function (DUF1176) F3090_RS07045 PF02779 Transketolase, pyrimidine binding domain F3090_RS07045 PF02780 Transketolase, C-terminal domain F3090_RS07045 PF00456 Transketolase, thiamine diphosphate binding domain F3090_RS07050 PF00923 Transaldolase/Fructose-6-phosphate aldolase F3090_RS07055 PF03949 Malic enzyme, NAD binding domain F3090_RS07055 PF00390 Malic enzyme, N-terminal domain F3090_RS07055 PF01515 Phosphate acetyl/butaryl transferase F3090_RS07060 PF00936 BMC domain F3090_RS07065 PF10662 Ethanolamine utilisation - propanediol utilisation F3090_RS07070 PF06249 Ethanolamine utilisation protein EutQ F3090_RS07075 PF01923 Cobalamin adenosyltransferase F3090_RS07080 PF01515 Phosphate acetyl/butaryl transferase F3090_RS07085 PF00936 BMC domain F3090_RS07090 PF03319 Ethanolamine utilisation protein EutN/carboxysome F3090_RS07095 PF00171 Aldehyde dehydrogenase family F3090_RS07105 PF00465 Iron-containing alcohol dehydrogenase F3090_RS07110 PF04346 Ethanolamine utilisation protein, EutH F3090_RS07115 PF06277 Ethanolamine utilisation protein EutA F3090_RS07120 PF06751 Ethanolamine ammonia lyase large subunit (EutB) F3090_RS07125 PF05985 Ethanolamine ammonia-lyase light chain (EutC) F3090_RS07130 PF00936 BMC domain F3090_RS07135 PF16365 Ethanolamine utilization protein EutK C-terminus F3090_RS07135 PF00936 BMC domain F3090_RS07140 PF12833 Helix-turn-helix domain F3090_RS07145 PF01218 Coproporphyrinogen III oxidase F3090_RS07150 PF01520 N-acetylmuramoyl-L-alanine amidase F3090_RS07155 PF00583 Acetyltransferase (GNAT) family F3090_RS07160 PF11143 Protein of unknown function (DUF2919) F3090_RS07165 PF06572 Protein of unknown function (DUF1131) F3090_RS07170 PF04261 Dyp-type peroxidase family F3090_RS07185 PF00528 Binding-protein-dependent transport system inner membrane component F3090_RS07190 PF00528 Binding-protein-dependent transport system inner membrane component F3090_RS07195 PF00005 ABC transporter F3090_RS07200 PF00291 Pyridoxal-phosphate dependent enzyme F3090_RS07205 PF13474 SnoaL-like domain F3090_RS07210 PF00392 Bacterial regulatory proteins, gntR family F3090_RS07210 PF00155 Aminotransferase class I and II F3090_RS07215 PF08543 Phosphomethylpyrimidine kinase F3090_RS07225 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 F3090_RS07230 PF05524 PEP-utilising enzyme, N-terminal F3090_RS07230 PF02896 PEP-utilising enzyme, TIM barrel domain F3090_RS07230 PF00391 PEP-utilising enzyme, mobile domain F3090_RS07235 PF00381 PTS HPr component phosphorylation site F3090_RS07240 PF00291 Pyridoxal-phosphate dependent enzyme F3090_RS07250 PF04354 ZipA, C-terminal FtsZ-binding domain F3090_RS07255 PF03119 NAD-dependent DNA ligase C4 zinc finger domain F3090_RS07255 PF03120 NAD-dependent DNA ligase OB-fold domain F3090_RS07255 PF01653 NAD-dependent DNA ligase adenylation domain F3090_RS07255 PF00533 BRCA1 C Terminus (BRCT) domain F3090_RS07255 PF12826 Helix-hairpin-helix motif F3090_RS07260 PF12843 Putative quorum-sensing-regulated virulence factor F3090_RS07265 PF13593 SBF-like CPA transporter family (DUF4137) F3090_RS07270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3090_RS07270 PF03466 LysR substrate binding domain F3090_RS07295 PF00749 tRNA synthetases class I (E and Q), catalytic domain F3090_RS07300 PF07037 Putative transcription regulator (DUF1323) F3090_RS07305 PF07037 Putative transcription regulator (DUF1323) F3090_RS07320 PF00563 EAL domain F3090_RS07320 PF05231 MASE1 F3090_RS07325 PF01773 Na+ dependent nucleoside transporter N-terminus F3090_RS07325 PF07662 Na+ dependent nucleoside transporter C-terminus F3090_RS07325 PF07670 Nucleoside recognition F3090_RS07330 PF01566 Natural resistance-associated macrophage protein F3090_RS07335 PF10697 Protein of unknown function (DUF2502) F3090_RS07340 PF00248 Aldo/keto reductase family F3090_RS07345 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain F3090_RS07345 PF00205 Thiamine pyrophosphate enzyme, central domain F3090_RS07345 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain F3090_RS07350 PF00654 Voltage gated chloride channel F3090_RS07355 PF02685 Glucokinase F3090_RS07360 PF00072 Response regulator receiver domain F3090_RS07360 PF04397 LytTr DNA-binding domain F3090_RS07365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3090_RS07365 PF07694 5TMR of 5TMR-LYT F3090_RS07365 PF06580 Histidine kinase F3090_RS07380 PF00155 Aminotransferase class I and II F3090_RS07390 PF07690 Major Facilitator Superfamily F3090_RS07395 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region F3090_RS07400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3090_RS07400 PF03466 LysR substrate binding domain F3090_RS07420 PF01226 Formate/nitrite transporter F3090_RS07425 PF04333 MlaA lipoprotein F3090_RS07430 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) F3090_RS07435 PF04175 Protein of unknown function (DUF406) F3090_RS07440 PF00108 Thiolase, N-terminal domain F3090_RS07440 PF02803 Thiolase, C-terminal domain F3090_RS07445 PF00378 Enoyl-CoA hydratase/isomerase F3090_RS07445 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain F3090_RS07445 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain F3090_RS07450 PF00300 Histidine phosphatase superfamily (branch 1) F3090_RS07455 PF01713 Smr domain F3090_RS07460 PF05175 Methyltransferase small domain F3090_RS07465 PF01264 Chorismate synthase F3090_RS07470 PF03411 Penicillin-insensitive murein endopeptidase F3090_RS07475 PF01925 Sulfite exporter TauE/SafE F3090_RS07480 PF04315 Elongation factor P hydroxylase F3090_RS07485 PF08891 YfcL protein F3090_RS07490 PF05430 S-adenosyl-L-methionine-dependent methyltransferase F3090_RS07490 PF01266 FAD dependent oxidoreductase F3090_RS07495 PF02801 Beta-ketoacyl synthase, C-terminal domain F3090_RS07495 PF00109 Beta-ketoacyl synthase, N-terminal domain F3090_RS07500 PF07690 Major Facilitator Superfamily F3090_RS07510 PF11890 Domain of unknown function (DUF3410) F3090_RS07510 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain F3090_RS07510 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain F3090_RS07515 PF02774 Semialdehyde dehydrogenase, dimerisation domain F3090_RS07515 PF01118 Semialdehyde dehydrogenase, NAD binding domain F3090_RS07520 PF01416 tRNA pseudouridine synthase F3090_RS07525 PF09335 SNARE associated Golgi protein F3090_RS07530 PF17848 Acetyl-coA carboxylase zinc finger domain F3090_RS07530 PF01039 Carboxyl transferase domain F3090_RS07535 PF02875 Mur ligase family, glutamate ligase domain F3090_RS07535 PF08245 Mur ligase middle domain F3090_RS07540 PF05036 Sporulation related domain F3090_RS07545 PF02674 Colicin V production protein F3090_RS07550 PF00156 Phosphoribosyl transferase domain F3090_RS07555 PF02441 Flavoprotein F3090_RS07565 PF00497 Bacterial extracellular solute-binding proteins, family 3 F3090_RS07570 PF00497 Bacterial extracellular solute-binding proteins, family 3 F3090_RS07575 PF00528 Binding-protein-dependent transport system inner membrane component F3090_RS07580 PF00528 Binding-protein-dependent transport system inner membrane component F3090_RS07585 PF00005 ABC transporter F3090_RS07590 PF13302 Acetyltransferase (GNAT) domain F3090_RS07600 PF08338 Domain of unknown function (DUF1731) F3090_RS07600 PF01370 NAD dependent epimerase/dehydratase family F3090_RS07605 PF02152 Dihydroneopterin aldolase F3090_RS07610 PF00043 Glutathione S-transferase, C-terminal domain F3090_RS07610 PF02798 Glutathione S-transferase, N-terminal domain F3090_RS07615 PF02798 Glutathione S-transferase, N-terminal domain F3090_RS07615 PF14834 Glutathione S-transferase, C-terminal domain F3090_RS07620 PF12850 Calcineurin-like phosphoesterase superfamily domain F3090_RS07625 PF00293 NUDIX domain F3090_RS07630 PF01515 Phosphate acetyl/butaryl transferase F3090_RS07630 PF07085 DRTGG domain F3090_RS07635 PF00871 Acetokinase family F3090_RS07640 PF04217 Protein of unknown function, DUF412 F3090_RS07645 PF03887 YfbU domain F3090_RS07650 PF13419 Haloacid dehalogenase-like hydrolase F3090_RS07655 PF03600 Citrate transporter F3090_RS07655 PF02080 TrkA-C domain F3090_RS07665 PF00155 Aminotransferase class I and II F3090_RS07670 PF03466 LysR substrate binding domain F3090_RS07670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3090_RS07675 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 F3090_RS07680 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit F3090_RS07685 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit F3090_RS07685 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit F3090_RS07695 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region F3090_RS07695 PF10531 SLBB domain F3090_RS07695 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit F3090_RS07700 PF01568 Molydopterin dinucleotide binding domain F3090_RS07700 PF04879 Molybdopterin oxidoreductase Fe4S4 domain F3090_RS07700 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region F3090_RS07700 PF00384 Molybdopterin oxidoreductase F3090_RS07705 PF00146 NADH dehydrogenase F3090_RS07710 PF12838 4Fe-4S dicluster domain F3090_RS07715 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 F3090_RS07720 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L F3090_RS07725 PF00361 Proton-conducting membrane transporter F3090_RS07725 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus F3090_RS07730 PF00361 Proton-conducting membrane transporter F3090_RS07735 PF00361 Proton-conducting membrane transporter F3090_RS07740 PF12706 Beta-lactamase superfamily domain F3090_RS07745 PF13673 Acetyltransferase (GNAT) domain F3090_RS07750 PF00425 chorismate binding enzyme F3090_RS07755 PF16582 Middle domain of thiamine pyrophosphate F3090_RS07755 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain F3090_RS07755 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain F3090_RS07760 PF12697 Alpha/beta hydrolase family F3090_RS07765 PF00378 Enoyl-CoA hydratase/isomerase F3090_RS07770 PF13378 Enolase C-terminal domain-like F3090_RS07775 PF00501 AMP-binding enzyme F3090_RS07775 PF13193 AMP-binding enzyme C-terminal domain F3090_RS07780 PF00293 NUDIX domain F3090_RS07785 PF04754 Putative transposase, YhgA-like F3090_RS07790 PF07437 YfaZ precursor F3090_RS07795 PF00994 Probable molybdopterin binding domain F3090_RS07800 PF01614 Bacterial transcriptional regulator F3090_RS07800 PF09339 IclR helix-turn-helix domain F3090_RS07805 PF13378 Enolase C-terminal domain-like F3090_RS07805 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain F3090_RS07810 PF07690 Major Facilitator Superfamily F3090_RS07815 PF03328 HpcH/HpaI aldolase/citrate lyase family F3090_RS07820 PF02754 Cysteine-rich domain F3090_RS07820 PF13183 4Fe-4S dicluster domain F3090_RS07825 PF00890 FAD binding domain F3090_RS07830 PF04324 BFD-like [2Fe-2S] binding domain F3090_RS07830 PF01266 FAD dependent oxidoreductase F3090_RS07835 PF07690 Major Facilitator Superfamily F3090_RS07840 PF03009 Glycerophosphoryl diester phosphodiesterase family F3090_RS07845 PF00111 2Fe-2S iron-sulfur cluster binding domain F3090_RS07850 PF00268 Ribonucleotide reductase, small chain F3090_RS07855 PF00317 Ribonucleotide reductase, all-alpha domain F3090_RS07855 PF02867 Ribonucleotide reductase, barrel domain F3090_RS07855 PF03477 ATP cone domain F3090_RS07865 PF00521 DNA gyrase/topoisomerase IV, subunit A F3090_RS07865 PF03989 DNA gyrase C-terminal domain, beta-propeller F3090_RS07870 PF00072 Response regulator receiver domain F3090_RS07870 PF09456 RcsC Alpha-Beta-Loop (ABL) F3090_RS07870 PF00512 His Kinase A (phospho-acceptor) domain F3090_RS07870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3090_RS07875 PF00196 Bacterial regulatory proteins, luxR family F3090_RS07875 PF00072 Response regulator receiver domain F3090_RS07880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3090_RS07880 PF01627 Hpt domain F3090_RS07880 PF16359 RcsD-ABL domain F3090_RS07885 PF13737 Transposase DDE domain F3090_RS07890 PF00267 Gram-negative porin F3090_RS07895 PF02424 ApbE family F3090_RS07900 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain F3090_RS07900 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain F3090_RS07900 PF02805 Metal binding domain of Ada F3090_RS07900 PF12833 Helix-turn-helix domain F3090_RS07905 PF13532 2OG-Fe(II) oxygenase superfamily F3090_RS07910 PF00005 ABC transporter F3090_RS07915 PF03448 MgtE intracellular N domain F3090_RS07915 PF01769 Divalent cation transporter F3090_RS07915 PF00571 CBS domain F3090_RS07920 PF00916 Sulfate permease family F3090_RS07920 PF01740 STAS domain F3090_RS07925 PF06039 Malate:quinone oxidoreductase (Mqo) F3090_RS07930 PF03974 Ecotin F3090_RS07935 PF01594 AI-2E family transporter F3090_RS07945 PF00884 Sulfatase F3090_RS07945 PF11893 Domain of unknown function (DUF3413) F3090_RS07950 PF07208 Protein of unknown function (DUF1414) F3090_RS07955 PF04245 37-kD nucleoid-associated bacterial protein F3090_RS07960 PF08220 DeoR-like helix-turn-helix domain F3090_RS07960 PF00455 DeoR C terminal sensor domain F3090_RS07965 PF00293 NUDIX domain F3090_RS07970 PF00144 Beta-lactamase F3090_RS07980 PF01386 Ribosomal L25p family F3090_RS07985 PF00271 Helicase conserved C-terminal domain F3090_RS07985 PF04851 Type III restriction enzyme, res subunit F3090_RS07990 PF01479 S4 domain F3090_RS07990 PF00849 RNA pseudouridylate synthase F3090_RS07995 PF07690 Major Facilitator Superfamily F3090_RS08000 PF13989 YejG-like protein F3090_RS08005 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F3090_RS08005 PF00005 ABC transporter F3090_RS08010 PF12911 N-terminal TM domain of oligopeptide transport permease C F3090_RS08010 PF00528 Binding-protein-dependent transport system inner membrane component F3090_RS08015 PF00528 Binding-protein-dependent transport system inner membrane component F3090_RS08020 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F3090_RS08025 PF12792 CSS motif domain associated with EAL F3090_RS08025 PF00563 EAL domain F3090_RS08030 PF00877 NlpC/P60 family F3090_RS08035 PF01569 PAP2 superfamily F3090_RS08040 PF07683 Cobalamin synthesis protein cobW C-terminal domain F3090_RS08040 PF02492 CobW/HypB/UreG, nucleotide-binding domain F3090_RS08045 PF01232 Mannitol dehydrogenase Rossmann domain F3090_RS08045 PF08125 Mannitol dehydrogenase C-terminal domain F3090_RS08050 PF03786 D-mannonate dehydratase (UxuA) F3090_RS08055 PF01132 Elongation factor P (EF-P) OB domain F3090_RS08055 PF08207 Elongation factor P (EF-P) KOW-like domain F3090_RS08055 PF09285 Elongation factor P, C-terminal F3090_RS08060 PF03692 Putative zinc- or iron-chelating domain F3090_RS08065 PF07690 Major Facilitator Superfamily F3090_RS08070 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 F3090_RS08070 PF00381 PTS HPr component phosphorylation site F3090_RS08075 PF00294 pfkB family carbohydrate kinase F3090_RS08080 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit F3090_RS08080 PF02378 Phosphotransferase system, EIIC F3090_RS08085 PF01261 Xylose isomerase-like TIM barrel F3090_RS08090 PF03601 Conserved hypothetical protein 698 F3090_RS08095 PF03466 LysR substrate binding domain F3090_RS08095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3090_RS08100 PF00324 Amino acid permease F3090_RS08105 PF00593 TonB dependent receptor F3090_RS08105 PF07715 TonB-dependent Receptor Plug Domain F3090_RS08110 PF00756 Putative esterase F3090_RS08115 PF01227 GTP cyclohydrolase I F3090_RS08120 PF04235 Protein of unknown function (DUF418) F3090_RS08125 PF00356 Bacterial regulatory proteins, lacI family F3090_RS08130 PF13407 Periplasmic binding protein domain F3090_RS08135 PF00005 ABC transporter F3090_RS08140 PF02653 Branched-chain amino acid transport system / permease component F3090_RS08145 PF02698 DUF218 domain F3090_RS08150 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region F3090_RS08150 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region F3090_RS08155 PF04172 LrgB-like family F3090_RS08160 PF03788 LrgA family F3090_RS08165 PF01207 Dihydrouridine synthase (Dus) F3090_RS08170 PF04966 Carbohydrate-selective porin, OprB family F3090_RS08175 PF00874 PRD domain F3090_RS08175 PF03123 CAT RNA binding domain F3090_RS08180 PF00367 phosphotransferase system, EIIB F3090_RS08180 PF02378 Phosphotransferase system, EIIC F3090_RS08180 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 F3090_RS08185 PF00232 Glycosyl hydrolase family 1 F3090_RS08190 PF02321 Outer membrane efflux protein F3090_RS08195 PF09335 SNARE associated Golgi protein F3090_RS08200 PF04893 Yip1 domain F3090_RS08205 PF00768 D-alanyl-D-alanine carboxypeptidase F3090_RS08215 PF09330 D-lactate dehydrogenase, membrane binding F3090_RS08215 PF01565 FAD binding domain F3090_RS08220 PF01915 Glycosyl hydrolase family 3 C-terminal domain F3090_RS08220 PF00933 Glycosyl hydrolase family 3 N terminal domain F3090_RS08220 PF14310 Fibronectin type III-like domain F3090_RS08225 PF04069 Substrate binding domain of ABC-type glycine betaine transport system F3090_RS08230 PF00528 Binding-protein-dependent transport system inner membrane component F3090_RS08235 PF00005 ABC transporter F3090_RS08240 PF00528 Binding-protein-dependent transport system inner membrane component F3090_RS08250 PF06580 Histidine kinase F3090_RS08250 PF07694 5TMR of 5TMR-LYT F3090_RS08255 PF04397 LytTr DNA-binding domain F3090_RS08255 PF00072 Response regulator receiver domain F3090_RS08260 PF07308 Protein of unknown function (DUF1456) F3090_RS08265 PF01588 Putative tRNA binding domain F3090_RS08265 PF09334 tRNA synthetases class I (M) F3090_RS08270 PF10609 NUBPL iron-transfer P-loop NTPase F3090_RS08280 PF11776 Nickel/cobalt transporter regulator F3090_RS08285 PF03466 LysR substrate binding domain F3090_RS08285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3090_RS08290 PF00860 Permease family F3090_RS08295 PF13382 Adenine deaminase C-terminal domain F3090_RS08295 PF01979 Amidohydrolase family F3090_RS08300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3090_RS08300 PF03466 LysR substrate binding domain F3090_RS08310 PF02110 Hydroxyethylthiazole kinase family F3090_RS08315 PF08543 Phosphomethylpyrimidine kinase F3090_RS08320 PF01791 DeoC/LacD family aldolase F3090_RS08325 PF07690 Major Facilitator Superfamily F3090_RS08335 PF00106 short chain dehydrogenase F3090_RS08340 PF00356 Bacterial regulatory proteins, lacI family F3090_RS08345 PF04198 Putative sugar-binding domain F3090_RS08350 PF08125 Mannitol dehydrogenase C-terminal domain F3090_RS08350 PF01232 Mannitol dehydrogenase Rossmann domain F3090_RS08355 PF02782 FGGY family of carbohydrate kinases, C-terminal domain F3090_RS08355 PF00370 FGGY family of carbohydrate kinases, N-terminal domain F3090_RS08360 PF07690 Major Facilitator Superfamily F3090_RS08365 PF13419 Haloacid dehalogenase-like hydrolase F3090_RS08370 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain F3090_RS08370 PF13378 Enolase C-terminal domain-like F3090_RS08375 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F3090_RS08380 PF00528 Binding-protein-dependent transport system inner membrane component F3090_RS08385 PF00528 Binding-protein-dependent transport system inner membrane component F3090_RS08385 PF12911 N-terminal TM domain of oligopeptide transport permease C F3090_RS08390 PF00005 ABC transporter F3090_RS08390 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F3090_RS08395 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F3090_RS08395 PF00005 ABC transporter F3090_RS08400 PF00781 Diacylglycerol kinase catalytic domain F3090_RS08405 PF16325 Peptidase family U32 C-terminal domain F3090_RS08405 PF01136 Peptidase family U32 F3090_RS08410 PF00486 Transcriptional regulatory protein, C terminal F3090_RS08410 PF00072 Response regulator receiver domain F3090_RS08415 PF00672 HAMP domain F3090_RS08415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3090_RS08415 PF00512 His Kinase A (phospho-acceptor) domain F3090_RS08420 PF07690 Major Facilitator Superfamily F3090_RS08425 PF00873 AcrB/AcrD/AcrF family F3090_RS08430 PF00873 AcrB/AcrD/AcrF family F3090_RS08435 PF13533 Biotin-lipoyl like F3090_RS08440 PF00375 Sodium:dicarboxylate symporter family F3090_RS08455 PF00486 Transcriptional regulatory protein, C terminal F3090_RS08455 PF00072 Response regulator receiver domain F3090_RS08460 PF00512 His Kinase A (phospho-acceptor) domain F3090_RS08460 PF13426 PAS domain F3090_RS08460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3090_RS08460 PF00672 HAMP domain F3090_RS08465 PF00012 Hsp70 protein F3090_RS08470 PF00730 HhH-GPD superfamily base excision DNA repair protein F3090_RS08470 PF06029 AlkA N-terminal domain F3090_RS08475 PF00485 Phosphoribulokinase / Uridine kinase family F3090_RS08480 PF00692 dUTPase F3090_RS08485 PF05170 AsmA family F3090_RS08490 PF03741 Integral membrane protein TerC family F3090_RS08490 PF00571 CBS domain F3090_RS08490 PF03471 Transporter associated domain F3090_RS08495 PF00483 Nucleotidyl transferase F3090_RS08500 PF01569 PAP2 superfamily F3090_RS08510 PF14052 Capsule assembly protein Wzi F3090_RS08515 PF02563 Polysaccharide biosynthesis/export protein F3090_RS08515 PF18412 Outer-membrane lipoprotein Wza C-terminal domain F3090_RS08515 PF10531 SLBB domain F3090_RS08520 PF01451 Low molecular weight phosphotyrosine protein phosphatase F3090_RS08525 PF02706 Chain length determinant protein F3090_RS08525 PF13807 G-rich domain on putative tyrosine kinase F3090_RS08525 PF13614 AAA domain F3090_RS08530 PF02397 Bacterial sugar transferase F3090_RS08540 PF00535 Glycosyl transferase family 2 F3090_RS08545 PF03808 Glycosyl transferase WecB/TagA/CpsF family F3090_RS08560 PF01943 Polysaccharide biosynthesis protein F3090_RS08565 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain F3090_RS08565 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase F3090_RS08570 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain F3090_RS08570 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain F3090_RS08570 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain F3090_RS08580 PF01370 NAD dependent epimerase/dehydratase family F3090_RS08585 PF01061 ABC-2 type transporter F3090_RS08590 PF00005 ABC transporter F3090_RS08600 PF03275 UDP-galactopyranose mutase F3090_RS08610 PF00534 Glycosyl transferases group 1 F3090_RS08610 PF13439 Glycosyltransferase Family 4 F3090_RS08615 PF00535 Glycosyl transferase family 2 F3090_RS08615 PF01501 Glycosyl transferase family 8 F3090_RS08630 PF13737 Transposase DDE domain F3090_RS08635 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase F3090_RS08635 PF01502 Phosphoribosyl-AMP cyclohydrolase F3090_RS08640 PF00977 Histidine biosynthesis protein F3090_RS08645 PF00977 Histidine biosynthesis protein F3090_RS08650 PF00117 Glutamine amidotransferase class-I F3090_RS08655 PF08645 Polynucleotide kinase 3 phosphatase F3090_RS08655 PF00475 Imidazoleglycerol-phosphate dehydratase F3090_RS08660 PF00155 Aminotransferase class I and II F3090_RS08665 PF00815 Histidinol dehydrogenase F3090_RS08670 PF08029 HisG, C-terminal domain F3090_RS08670 PF01634 ATP phosphoribosyltransferase F3090_RS08680 PF01370 NAD dependent epimerase/dehydratase family F3090_RS08685 PF03466 LysR substrate binding domain F3090_RS08685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3090_RS08695 PF13520 Amino acid permease F3090_RS08700 PF01022 Bacterial regulatory protein, arsR family F3090_RS08705 PF03144 Elongation factor Tu domain 2 F3090_RS08705 PF00679 Elongation factor G C-terminus F3090_RS08705 PF00009 Elongation factor Tu GTP binding domain F3090_RS08705 PF14492 Elongation Factor G, domain II F3090_RS08705 PF03764 Elongation factor G, domain IV F3090_RS08710 PF08411 Exonuclease C-terminal F3090_RS08710 PF00929 Exonuclease F3090_RS08715 PF07943 Penicillin-binding protein 5, C-terminal domain F3090_RS08715 PF00768 D-alanyl-D-alanine carboxypeptidase F3090_RS08720 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) F3090_RS08725 PF01979 Amidohydrolase family F3090_RS08730 PF07273 Protein of unknown function (DUF1439) F3090_RS08735 PF07690 Major Facilitator Superfamily F3090_RS08740 PF13302 Acetyltransferase (GNAT) domain F3090_RS08745 PF04337 Protein of unknown function, DUF480 F3090_RS08750 PF01408 Oxidoreductase family, NAD-binding Rossmann fold F3090_RS08755 PF03023 Lipid II flippase MurJ F3090_RS08760 PF07690 Major Facilitator Superfamily F3090_RS08765 PF03466 LysR substrate binding domain F3090_RS08765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3090_RS08770 PF12111 Polyribonucleotide phosphorylase C terminal F3090_RS08770 PF00575 S1 RNA binding domain F3090_RS08770 PF10150 Ribonuclease E/G family F3090_RS08780 PF01479 S4 domain F3090_RS08780 PF00849 RNA pseudouridylate synthase F3090_RS08785 PF02545 Maf-like protein F3090_RS08790 PF02620 Large ribosomal RNA subunit accumulation protein YceD F3090_RS08795 PF01783 Ribosomal L32p protein family F3090_RS08800 PF02504 Fatty acid synthesis protein F3090_RS08805 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III F3090_RS08805 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal F3090_RS08810 PF00698 Acyl transferase domain F3090_RS08820 PF00550 Phosphopantetheine attachment site F3090_RS08825 PF00109 Beta-ketoacyl synthase, N-terminal domain F3090_RS08825 PF02801 Beta-ketoacyl synthase, C-terminal domain F3090_RS08830 PF01063 Amino-transferase class IV F3090_RS08835 PF02618 YceG-like family F3090_RS08840 PF02223 Thymidylate kinase F3090_RS08845 PF09115 DNA polymerase III, delta subunit, C terminal F3090_RS08850 PF01026 TatD related DNase F3090_RS08855 PF00367 phosphotransferase system, EIIB F3090_RS08855 PF02378 Phosphotransferase system, EIIC F3090_RS08860 PF01230 HIT domain F3090_RS08865 PF07233 Protein of unknown function (DUF1425) F3090_RS08870 PF13036 Peptidoglycan-synthase activator LpoB F3090_RS08875 PF01636 Phosphotransferase enzyme family F3090_RS08880 PF00933 Glycosyl hydrolase family 3 N terminal domain F3090_RS08885 PF05728 Uncharacterised protein family (UPF0227) F3090_RS08890 PF07992 Pyridine nucleotide-disulphide oxidoreductase F3090_RS08895 PF05433 Glycine zipper 2TM domain F3090_RS08900 PF07715 TonB-dependent Receptor Plug Domain F3090_RS08900 PF00593 TonB dependent receptor F3090_RS08910 PF00440 Bacterial regulatory proteins, tetR family F3090_RS08920 PF07338 Protein of unknown function (DUF1471) F3090_RS08925 PF17969 L,D-transpeptidase C-terminal domain F3090_RS08925 PF01476 LysM domain F3090_RS08925 PF03734 L,D-transpeptidase catalytic domain F3090_RS08930 PF17757 UvrB interaction domain F3090_RS08930 PF03461 TRCF domain F3090_RS08930 PF00271 Helicase conserved C-terminal domain F3090_RS08930 PF00270 DEAD/DEAH box helicase F3090_RS08930 PF02559 CarD-like/TRCF domain F3090_RS08940 PF02687 FtsX-like permease family F3090_RS08940 PF12704 MacB-like periplasmic core domain F3090_RS08945 PF00005 ABC transporter F3090_RS08950 PF12704 MacB-like periplasmic core domain F3090_RS08950 PF02687 FtsX-like permease family F3090_RS08955 PF00480 ROK family F3090_RS08960 PF02146 Sir2 family F3090_RS08970 PF04198 Putative sugar-binding domain F3090_RS08975 PF00121 Triosephosphate isomerase F3090_RS08980 PF04166 Pyridoxal phosphate biosynthetic protein PdxA F3090_RS08985 PF07005 Sugar-binding N-terminal domain F3090_RS08985 PF17042 Nucleotide-binding C-terminal domain F3090_RS08990 PF03812 2-keto-3-deoxygluconate permease F3090_RS08995 PF03829 PTS system glucitol/sorbitol-specific IIA component F3090_RS09000 PF02502 Ribose/Galactose Isomerase F3090_RS09005 PF00923 Transaldolase/Fructose-6-phosphate aldolase F3090_RS09010 PF02780 Transketolase, C-terminal domain F3090_RS09010 PF02779 Transketolase, pyrimidine binding domain F3090_RS09010 PF00456 Transketolase, thiamine diphosphate binding domain F3090_RS09015 PF00501 AMP-binding enzyme F3090_RS09015 PF13193 AMP-binding enzyme C-terminal domain F3090_RS09025 PF13416 Bacterial extracellular solute-binding protein F3090_RS09030 PF00528 Binding-protein-dependent transport system inner membrane component F3090_RS09035 PF00528 Binding-protein-dependent transport system inner membrane component F3090_RS09040 PF00005 ABC transporter F3090_RS09040 PF08402 TOBE domain F3090_RS09045 PF01546 Peptidase family M20/M25/M40 F3090_RS09045 PF07687 Peptidase dimerisation domain F3090_RS09050 PF08007 Cupin superfamily protein F3090_RS09055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3090_RS09055 PF08918 PhoQ Sensor F3090_RS09060 PF00486 Transcriptional regulatory protein, C terminal F3090_RS09060 PF00072 Response regulator receiver domain F3090_RS09075 PF08328 Adenylosuccinate lyase C-terminal F3090_RS09075 PF00206 Lyase F3090_RS09080 PF04356 Protein of unknown function (DUF489) F3090_RS09090 PF00293 NUDIX domain F3090_RS09095 PF00849 RNA pseudouridylate synthase F3090_RS09100 PF00180 Isocitrate/isopropylmalate dehydrogenase F3090_RS09130 PF06906 Protein of unknown function (DUF1272) F3090_RS09135 PF00107 Zinc-binding dehydrogenase F3090_RS09135 PF08240 Alcohol dehydrogenase GroES-like domain F3090_RS09135 PF13823 Alcohol dehydrogenase GroES-associated F3090_RS09140 PF10685 Stress-induced bacterial acidophilic repeat motif F3090_RS09145 PF05974 Domain of unknown function (DUF892) F3090_RS09155 PF13737 Transposase DDE domain F3090_RS09165 PF05067 Manganese containing catalase F3090_RS09170 PF01654 Cytochrome bd terminal oxidase subunit I F3090_RS09175 PF02322 Cytochrome bd terminal oxidase subunit II F3090_RS09205 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase F3090_RS09210 PF03466 LysR substrate binding domain F3090_RS09210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3090_RS09215 PF00990 Diguanylate cyclase, GGDEF domain F3090_RS09220 PF17763 Glutaminase/Asparaginase C-terminal domain F3090_RS09220 PF00710 Asparaginase, N-terminal F3090_RS09225 PF03279 Bacterial lipid A biosynthesis acyltransferase F3090_RS09230 PF01810 LysE type translocator F3090_RS09235 PF10749 Protein of unknown function (DUF2534) F3090_RS09255 PF00990 Diguanylate cyclase, GGDEF domain F3090_RS09255 PF13185 GAF domain F3090_RS09260 PF00589 Phage integrase family F3090_RS09260 PF02899 Phage integrase, N-terminal SAM-like domain F3090_RS09300 PF02086 D12 class N6 adenine-specific DNA methyltransferase F3090_RS09305 PF05840 Bacteriophage replication gene A protein (GPA) F3090_RS09410 PF01966 HD domain F3090_RS09440 PF17482 Phage tail sheath C-terminal domain F3090_RS09440 PF04984 Phage tail sheath protein subtilisin-like domain F3090_RS09450 PF04606 Ogr/Delta-like zinc finger F3090_RS09455 PF03891 Domain of unknown function (DUF333) F3090_RS09460 PF04343 Protein of unknown function, DUF488 F3090_RS09465 PF04463 Protein of unknown function (DUF523) F3090_RS09470 PF06418 CTP synthase N-terminus F3090_RS09470 PF00117 Glutamine amidotransferase class-I F3090_RS09475 PF07690 Major Facilitator Superfamily F3090_RS09480 PF02311 AraC-like ligand binding domain F3090_RS09480 PF12833 Helix-turn-helix domain F3090_RS09485 PF04284 Protein of unknown function (DUF441) F3090_RS09490 PF04073 Aminoacyl-tRNA editing domain F3090_RS09495 PF01075 Glycosyltransferase family 9 (heptosyltransferase) F3090_RS09500 PF06183 DinI-like family F3090_RS09505 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) F3090_RS09510 PF00717 Peptidase S24-like F3090_RS09515 PF11799 impB/mucB/samB family C-terminal domain F3090_RS09515 PF13438 Domain of unknown function (DUF4113) F3090_RS09515 PF11798 IMS family HHH motif F3090_RS09515 PF00817 impB/mucB/samB family F3090_RS09520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3090_RS09520 PF03466 LysR substrate binding domain F3090_RS09530 PF07690 Major Facilitator Superfamily F3090_RS09535 PF03466 LysR substrate binding domain F3090_RS09535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3090_RS09550 PF00255 Glutathione peroxidase F3090_RS09560 PF04285 Protein of unknown function (DUF444) F3090_RS09565 PF06798 PrkA serine protein kinase C-terminal domain F3090_RS09565 PF08298 PrkA AAA domain F3090_RS09570 PF06629 MltA-interacting protein MipA F3090_RS09575 PF00248 Aldo/keto reductase family F3090_RS09580 PF01263 Aldose 1-epimerase F3090_RS09585 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain F3090_RS09585 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain F3090_RS09590 PF01641 SelR domain F3090_RS09595 PF07023 Protein of unknown function (DUF1315) F3090_RS09600 PF01844 HNH endonuclease F3090_RS09605 PF00704 Glycosyl hydrolases family 18 F3090_RS09605 PF00041 Fibronectin type III domain F3090_RS09610 PF00857 Isochorismatase family F3090_RS09615 PF00710 Asparaginase, N-terminal F3090_RS09615 PF17763 Glutaminase/Asparaginase C-terminal domain F3090_RS09620 PF01343 Peptidase family S49 F3090_RS09625 PF00881 Nitroreductase family F3090_RS09630 PF01569 PAP2 superfamily F3090_RS09635 PF00586 AIR synthase related protein, N-terminal domain F3090_RS09635 PF02769 AIR synthase related protein, C-terminal domain F3090_RS09640 PF01131 DNA topoisomerase F3090_RS09640 PF01751 Toprim domain F3090_RS09645 PF00550 Phosphopantetheine attachment site F3090_RS09645 PF16197 Ketoacyl-synthetase C-terminal extension F3090_RS09645 PF00109 Beta-ketoacyl synthase, N-terminal domain F3090_RS09645 PF02801 Beta-ketoacyl synthase, C-terminal domain F3090_RS09645 PF08240 Alcohol dehydrogenase GroES-like domain F3090_RS09645 PF00698 Acyl transferase domain F3090_RS09645 PF14765 Polyketide synthase dehydratase F3090_RS09645 PF08659 KR domain F3090_RS09650 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase F3090_RS09650 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain F3090_RS09655 PF00293 NUDIX domain F3090_RS09660 PF01066 CDP-alcohol phosphatidyltransferase F3090_RS09665 PF00581 Rhodanese-like domain F3090_RS09670 PF00005 ABC transporter F3090_RS09675 PF00528 Binding-protein-dependent transport system inner membrane component F3090_RS09680 PF13416 Bacterial extracellular solute-binding protein F3090_RS09685 PF02627 Carboxymuconolactone decarboxylase family F3090_RS09690 PF09335 SNARE associated Golgi protein F3090_RS09695 PF09335 SNARE associated Golgi protein F3090_RS09700 PF03372 Endonuclease/Exonuclease/phosphatase family F3090_RS09705 PF00202 Aminotransferase class-III F3090_RS09710 PF04958 Arginine N-succinyltransferase beta subunit F3090_RS09715 PF00171 Aldehyde dehydrogenase family F3090_RS09720 PF04996 Succinylarginine dihydrolase F3090_RS09725 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family F3090_RS09730 PF07813 LTXXQ motif family protein F3090_RS09740 PF02540 NAD synthase F3090_RS09745 PF04355 SmpA / OmlA family F3090_RS09750 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit F3090_RS09760 PF02378 Phosphotransferase system, EIIC F3090_RS09765 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit F3090_RS09770 PF07883 Cupin domain F3090_RS09770 PF12833 Helix-turn-helix domain F3090_RS09775 PF02056 Family 4 glycosyl hydrolase F3090_RS09775 PF11975 Family 4 glycosyl hydrolase C-terminal domain F3090_RS09780 PF04794 YdjC-like protein F3090_RS09785 PF18011 C-terminal domain found in long catalases F3090_RS09785 PF00199 Catalase F3090_RS09785 PF06628 Catalase-related immune-responsive F3090_RS09790 PF10729 Cell division activator CedA F3090_RS09795 PF00375 Sodium:dicarboxylate symporter family F3090_RS09800 PF04307 LexA-binding, inner membrane-associated putative hydrolase F3090_RS09810 PF13419 Haloacid dehalogenase-like hydrolase F3090_RS09815 PF14002 YniB-like protein F3090_RS09820 PF03061 Thioesterase superfamily F3090_RS09825 PF00593 TonB dependent receptor F3090_RS09825 PF07715 TonB-dependent Receptor Plug Domain F3090_RS09830 PF04279 Intracellular septation protein A F3090_RS09840 PF03692 Putative zinc- or iron-chelating domain F3090_RS09845 PF03922 OmpW family F3090_RS09850 PF13640 2OG-Fe(II) oxygenase superfamily F3090_RS09850 PF18331 PKHD-type hydroxylase C-terminal domain F3090_RS09855 PF00593 TonB dependent receptor F3090_RS09855 PF07715 TonB-dependent Receptor Plug Domain F3090_RS09860 PF00106 short chain dehydrogenase F3090_RS09880 PF00290 Tryptophan synthase alpha chain F3090_RS09885 PF00291 Pyridoxal-phosphate dependent enzyme F3090_RS09890 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase F3090_RS09890 PF00218 Indole-3-glycerol phosphate synthase F3090_RS09895 PF00591 Glycosyl transferase family, a/b domain F3090_RS09895 PF02885 Glycosyl transferase family, helical bundle domain F3090_RS09895 PF00117 Glutamine amidotransferase class-I F3090_RS09900 PF00425 chorismate binding enzyme F3090_RS09900 PF04715 Anthranilate synthase component I, N terminal region F3090_RS09905 PF02811 PHP domain F3090_RS09910 PF01300 Telomere recombination F3090_RS09920 PF03466 LysR substrate binding domain F3090_RS09920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3090_RS09925 PF00849 RNA pseudouridylate synthase F3090_RS09925 PF01479 S4 domain F3090_RS09930 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP F3090_RS09930 PF12557 Cob(I)alamin adenosyltransferase N terminal F3090_RS09935 PF00106 short chain dehydrogenase F3090_RS09945 PF01343 Peptidase family S49 F3090_RS09945 PF08496 Peptidase family S49 N-terminal F3090_RS09950 PF10692 Protein of unknown function (DUF2498) F3090_RS09955 PF01131 DNA topoisomerase F3090_RS09955 PF01751 Toprim domain F3090_RS09955 PF01396 Topoisomerase DNA binding C4 zinc finger F3090_RS09955 PF08272 Topoisomerase I zinc-ribbon-like F3090_RS09960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3090_RS09960 PF03466 LysR substrate binding domain F3090_RS09970 PF00694 Aconitase C-terminal domain F3090_RS09970 PF00330 Aconitase family (aconitate hydratase) F3090_RS09975 PF00925 GTP cyclohydrolase II F3090_RS09980 PF01569 PAP2 superfamily F3090_RS09985 PF06305 Lipopolysaccharide assembly protein A domain F3090_RS09990 PF18073 Rubredoxin metal binding domain F3090_RS09995 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family F3090_RS10000 PF01253 Translation initiation factor SUI1 F3090_RS10005 PF05433 Glycine zipper 2TM domain F3090_RS10010 PF08220 DeoR-like helix-turn-helix domain F3090_RS10010 PF00455 DeoR C terminal sensor domain F3090_RS10020 PF00773 RNB domain F3090_RS10020 PF17876 Cold shock domain F3090_RS10020 PF00575 S1 RNA binding domain F3090_RS10020 PF08206 Ribonuclease B OB domain F3090_RS10035 PF05962 HutD F3090_RS10040 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin F3090_RS10045 PF00005 ABC transporter F3090_RS10050 PF00005 ABC transporter F3090_RS10050 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F3090_RS10055 PF12911 N-terminal TM domain of oligopeptide transport permease C F3090_RS10055 PF00528 Binding-protein-dependent transport system inner membrane component F3090_RS10060 PF00528 Binding-protein-dependent transport system inner membrane component F3090_RS10065 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F3090_RS10070 PF13460 NAD(P)H-binding F3090_RS10080 PF12833 Helix-turn-helix domain F3090_RS10085 PF01546 Peptidase family M20/M25/M40 F3090_RS10085 PF07687 Peptidase dimerisation domain F3090_RS10090 PF07690 Major Facilitator Superfamily F3090_RS10095 PF02954 Bacterial regulatory protein, Fis family F3090_RS10095 PF00158 Sigma-54 interaction domain F3090_RS10100 PF04012 PspA/IM30 family F3090_RS10105 PF06667 Phage shock protein B F3090_RS10110 PF04024 PspC domain F3090_RS10115 PF09584 Phage shock protein PspD (Phageshock_PspD) F3090_RS10120 PF04317 YcjX-like family, DUF463 F3090_RS10125 PF05128 Domain of unknown function (DUF697) F3090_RS10130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3090_RS10130 PF03466 LysR substrate binding domain F3090_RS10135 PF02056 Family 4 glycosyl hydrolase F3090_RS10135 PF11975 Family 4 glycosyl hydrolase C-terminal domain F3090_RS10140 PF00158 Sigma-54 interaction domain F3090_RS10140 PF18024 Helix-turn-helix domain F3090_RS10145 PF05145 Transition state regulatory protein AbrB F3090_RS10150 PF08534 Redoxin F3090_RS10155 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain F3090_RS10155 PF13378 Enolase C-terminal domain-like F3090_RS10160 PF00246 Zinc carboxypeptidase F3090_RS10170 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F3090_RS10185 PF03466 LysR substrate binding domain F3090_RS10185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3090_RS10190 PF02129 X-Pro dipeptidyl-peptidase (S15 family) F3090_RS10195 PF07690 Major Facilitator Superfamily F3090_RS10200 PF00248 Aldo/keto reductase family F3090_RS10215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3090_RS10215 PF03466 LysR substrate binding domain F3090_RS10230 PF01965 DJ-1/PfpI family F3090_RS10235 PF14659 Phage integrase, N-terminal SAM-like domain F3090_RS10235 PF13356 Arm DNA-binding domain F3090_RS10235 PF00589 Phage integrase family F3090_RS10315 PF03589 Antitermination protein F3090_RS10365 PF03354 Phage Terminase F3090_RS10370 PF04860 Phage portal protein F3090_RS10375 PF00574 Clp protease F3090_RS10425 PF13974 YebO-like protein F3090_RS10475 PF02796 Helix-turn-helix domain of resolvase F3090_RS10475 PF00239 Resolvase, N terminal domain F3090_RS10485 PF06183 DinI-like family F3090_RS10495 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath F3090_RS10510 PF00691 OmpA family F3090_RS10510 PF13488 Glycine zipper F3090_RS10520 PF17871 AAA lid domain F3090_RS10520 PF10431 C-terminal, D2-small domain, of ClpB protein F3090_RS10520 PF00004 ATPase family associated with various cellular activities (AAA) F3090_RS10520 PF07724 AAA domain (Cdc48 subfamily) F3090_RS10525 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) F3090_RS10525 PF04717 Type VI secretion system, phage-baseplate injector F3090_RS10525 PF13296 Putative type VI secretion system Rhs element Vgr F3090_RS10600 PF00440 Bacterial regulatory proteins, tetR family F3090_RS10625 PF03466 LysR substrate binding domain F3090_RS10625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3090_RS10640 PF00753 Metallo-beta-lactamase superfamily F3090_RS10650 PF00440 Bacterial regulatory proteins, tetR family F3090_RS10655 PF08240 Alcohol dehydrogenase GroES-like domain F3090_RS10655 PF00107 Zinc-binding dehydrogenase F3090_RS10660 PF00155 Aminotransferase class I and II F3090_RS10665 PF03180 NLPA lipoprotein F3090_RS10670 PF09383 NIL domain F3090_RS10670 PF00005 ABC transporter F3090_RS10675 PF00528 Binding-protein-dependent transport system inner membrane component F3090_RS10680 PF00155 Aminotransferase class I and II F3090_RS10690 PF01037 Lrp/AsnC ligand binding domain F3090_RS10695 PF00324 Amino acid permease F3090_RS10710 PF01408 Oxidoreductase family, NAD-binding Rossmann fold F3090_RS10710 PF02894 Oxidoreductase family, C-terminal alpha/beta domain F3090_RS10715 PF00455 DeoR C terminal sensor domain F3090_RS10715 PF08220 DeoR-like helix-turn-helix domain F3090_RS10720 PF01544 CorA-like Mg2+ transporter protein F3090_RS10725 PF03880 DbpA RNA binding domain F3090_RS10725 PF00270 DEAD/DEAH box helicase F3090_RS10725 PF00271 Helicase conserved C-terminal domain F3090_RS10730 PF01171 PP-loop family F3090_RS10735 PF00582 Universal stress protein family F3090_RS10745 PF00267 Gram-negative porin F3090_RS10750 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg F3090_RS10750 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase F3090_RS10750 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain F3090_RS10750 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II F3090_RS10750 PF10371 Domain of unknown function F3090_RS10755 PF03891 Domain of unknown function (DUF333) F3090_RS10760 PF03724 META domain F3090_RS10765 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain F3090_RS10765 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain F3090_RS10770 PF09335 SNARE associated Golgi protein F3090_RS10775 PF11739 Dicarboxylate transport F3090_RS10780 PF13617 YnbE-like lipoprotein F3090_RS10785 PF07027 Protein of unknown function (DUF1318) F3090_RS10790 PF14525 AraC-binding-like domain F3090_RS10790 PF12833 Helix-turn-helix domain F3090_RS10840 PF13737 Transposase DDE domain F3090_RS10865 PF00171 Aldehyde dehydrogenase family F3090_RS10870 PF08546 Ketopantoate reductase PanE/ApbA C terminal F3090_RS10870 PF02558 Ketopantoate reductase PanE/ApbA F3090_RS10880 PF00497 Bacterial extracellular solute-binding proteins, family 3 F3090_RS10885 PF05721 Phytanoyl-CoA dioxygenase (PhyH) F3090_RS10890 PF00005 ABC transporter F3090_RS10895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3090_RS10895 PF03466 LysR substrate binding domain F3090_RS10905 PF01042 Endoribonuclease L-PSP F3090_RS10915 PF07687 Peptidase dimerisation domain F3090_RS10915 PF01546 Peptidase family M20/M25/M40 F3090_RS10930 PF02728 Copper amine oxidase, N3 domain F3090_RS10930 PF07833 Copper amine oxidase N-terminal domain F3090_RS10930 PF01179 Copper amine oxidase, enzyme domain F3090_RS10930 PF02727 Copper amine oxidase, N2 domain F3090_RS10935 PF01575 MaoC like domain F3090_RS10935 PF00171 Aldehyde dehydrogenase family F3090_RS10940 PF05138 Phenylacetic acid catabolic protein F3090_RS10945 PF06243 Phenylacetic acid degradation B F3090_RS10950 PF05138 Phenylacetic acid catabolic protein F3090_RS10955 PF01883 Iron-sulfur cluster assembly protein F3090_RS10960 PF00175 Oxidoreductase NAD-binding domain F3090_RS10960 PF00111 2Fe-2S iron-sulfur cluster binding domain F3090_RS10960 PF00970 Oxidoreductase FAD-binding domain F3090_RS10965 PF00378 Enoyl-CoA hydratase/isomerase F3090_RS10970 PF00378 Enoyl-CoA hydratase/isomerase F3090_RS10975 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain F3090_RS10975 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain F3090_RS10975 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain F3090_RS10980 PF03061 Thioesterase superfamily F3090_RS10985 PF00108 Thiolase, N-terminal domain F3090_RS10985 PF02803 Thiolase, C-terminal domain F3090_RS10990 PF14535 AMP-binding enzyme C-terminal domain F3090_RS10990 PF00501 AMP-binding enzyme F3090_RS10995 PF07848 PaaX-like protein F3090_RS10995 PF08223 PaaX-like protein C-terminal domain F3090_RS11000 PF00132 Bacterial transferase hexapeptide (six repeats) F3090_RS11010 PF02525 Flavodoxin-like fold F3090_RS11015 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold F3090_RS11015 PF00271 Helicase conserved C-terminal domain F3090_RS11015 PF11898 Domain of unknown function (DUF3418) F3090_RS11015 PF00270 DEAD/DEAH box helicase F3090_RS11015 PF04408 Helicase associated domain (HA2) F3090_RS11020 PF01596 O-methyltransferase F3090_RS11025 PF02321 Outer membrane efflux protein F3090_RS11030 PF13533 Biotin-lipoyl like F3090_RS11045 PF03466 LysR substrate binding domain F3090_RS11045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3090_RS11050 PF00248 Aldo/keto reductase family F3090_RS11055 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain F3090_RS11055 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase F3090_RS11065 PF00202 Aminotransferase class-III F3090_RS11070 PF04958 Arginine N-succinyltransferase beta subunit F3090_RS11075 PF00171 Aldehyde dehydrogenase family F3090_RS11080 PF04996 Succinylarginine dihydrolase F3090_RS11085 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family F3090_RS11090 PF00324 Amino acid permease F3090_RS11095 PF07690 Major Facilitator Superfamily F3090_RS11095 PF00083 Sugar (and other) transporter F3090_RS11100 PF02698 DUF218 domain F3090_RS11110 PF00171 Aldehyde dehydrogenase family F3090_RS11115 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain F3090_RS11115 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain F3090_RS11120 PF01679 Proteolipid membrane potential modulator F3090_RS11125 PF07166 Protein of unknown function (DUF1398) F3090_RS11130 PF01206 Sulfurtransferase TusA F3090_RS11135 PF04143 Sulphur transport F3090_RS11150 PF14001 YdfZ protein F3090_RS11160 PF00155 Aminotransferase class I and II F3090_RS11165 PF00367 phosphotransferase system, EIIB F3090_RS11165 PF02378 Phosphotransferase system, EIIC F3090_RS11170 PF00356 Bacterial regulatory proteins, lacI family F3090_RS11170 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family F3090_RS11175 PF06097 Bacterial protein of unknown function (DUF945) F3090_RS11180 PF01238 Phosphomannose isomerase type I F3090_RS11185 PF05681 Fumarate hydratase (Fumerase) F3090_RS11185 PF05683 Fumarase C-terminus F3090_RS11190 PF00206 Lyase F3090_RS11190 PF10415 Fumarase C C-terminus F3090_RS11195 PF05472 DNA replication terminus site-binding protein (Ter protein) F3090_RS11200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3090_RS11200 PF00672 HAMP domain F3090_RS11200 PF00512 His Kinase A (phospho-acceptor) domain F3090_RS11210 PF00072 Response regulator receiver domain F3090_RS11210 PF00486 Transcriptional regulatory protein, C terminal F3090_RS11215 PF06942 GlpM protein F3090_RS11225 PF13520 Amino acid permease F3090_RS11230 PF07338 Protein of unknown function (DUF1471) F3090_RS11240 PF05222 Alanine dehydrogenase/PNT, N-terminal domain F3090_RS11240 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch F3090_RS11240 PF01262 Alanine dehydrogenase/PNT, C-terminal domain F3090_RS11245 PF02233 NAD(P) transhydrogenase beta subunit F3090_RS11250 PF15930 Domain of unknown function F3090_RS11255 PF00582 Universal stress protein family F3090_RS11260 PF00027 Cyclic nucleotide-binding domain F3090_RS11260 PF00325 Bacterial regulatory proteins, crp family F3090_RS11265 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain F3090_RS11265 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain F3090_RS11275 PF03806 AbgT putative transporter family F3090_RS11280 PF01546 Peptidase family M20/M25/M40 F3090_RS11285 PF07687 Peptidase dimerisation domain F3090_RS11285 PF01546 Peptidase family M20/M25/M40 F3090_RS11290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3090_RS11290 PF03466 LysR substrate binding domain F3090_RS11295 PF01713 Smr domain F3090_RS11300 PF01614 Bacterial transcriptional regulator F3090_RS11300 PF09339 IclR helix-turn-helix domain F3090_RS11305 PF01144 Coenzyme A transferase F3090_RS11310 PF01144 Coenzyme A transferase F3090_RS11315 PF02803 Thiolase, C-terminal domain F3090_RS11315 PF00108 Thiolase, N-terminal domain F3090_RS11320 PF10397 Adenylosuccinate lyase C-terminus F3090_RS11320 PF00206 Lyase F3090_RS11325 PF12146 Serine aminopeptidase, S33 F3090_RS11330 PF02627 Carboxymuconolactone decarboxylase family F3090_RS11340 PF05681 Fumarate hydratase (Fumerase) F3090_RS11340 PF05683 Fumarase C-terminus F3090_RS11345 PF00939 Sodium:sulfate symporter transmembrane region F3090_RS11350 PF14537 Cytochrome c3 F3090_RS11350 PF00890 FAD binding domain F3090_RS11355 PF02424 ApbE family F3090_RS11360 PF00072 Response regulator receiver domain F3090_RS11365 PF00989 PAS fold F3090_RS11365 PF17203 Single cache domain 3 F3090_RS11365 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain F3090_RS11365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3090_RS11375 PF13580 SIS domain F3090_RS11380 PF06039 Malate:quinone oxidoreductase (Mqo) F3090_RS11385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3090_RS11385 PF03466 LysR substrate binding domain F3090_RS11390 PF00698 Acyl transferase domain F3090_RS11395 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG F3090_RS11400 PF03547 Membrane transport protein F3090_RS11410 PF01039 Carboxyl transferase domain F3090_RS11415 PF06857 Malonate decarboxylase delta subunit (MdcD) F3090_RS11420 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase F3090_RS11425 PF16957 Malonate decarboxylase, alpha subunit, transporter F3090_RS11430 PF01594 AI-2E family transporter F3090_RS11435 PF00893 Small Multidrug Resistance protein F3090_RS11440 PF00893 Small Multidrug Resistance protein F3090_RS11450 PF00089 Trypsin F3090_RS11460 PF02074 Carboxypeptidase Taq (M32) metallopeptidase F3090_RS11465 PF07690 Major Facilitator Superfamily F3090_RS11470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3090_RS11470 PF03466 LysR substrate binding domain F3090_RS11475 PF00480 ROK family F3090_RS11485 PF00654 Voltage gated chloride channel F3090_RS11490 PF02613 Nitrate reductase delta subunit F3090_RS11495 PF04976 DMSO reductase anchor subunit (DmsC) F3090_RS11500 PF12800 4Fe-4S binding domain F3090_RS11500 PF13247 4Fe-4S dicluster domain F3090_RS11510 PF06649 Protein of unknown function (DUF1161) F3090_RS11515 PF06788 Uncharacterised protein family (UPF0257) F3090_RS11520 PF13302 Acetyltransferase (GNAT) domain F3090_RS11525 PF06932 Protein of unknown function (DUF1283) F3090_RS11530 PF02694 Uncharacterised BCR, YnfA/UPF0060 family F3090_RS11535 PF07690 Major Facilitator Superfamily F3090_RS11540 PF01232 Mannitol dehydrogenase Rossmann domain F3090_RS11540 PF08125 Mannitol dehydrogenase C-terminal domain F3090_RS11545 PF00582 Universal stress protein family F3090_RS11550 PF00392 Bacterial regulatory proteins, gntR family F3090_RS11550 PF07729 FCD domain F3090_RS11555 PF00106 short chain dehydrogenase F3090_RS11560 PF01432 Peptidase family M3 F3090_RS11570 PF02311 AraC-like ligand binding domain F3090_RS11570 PF12833 Helix-turn-helix domain F3090_RS11575 PF02586 SOS response associated peptidase (SRAP) F3090_RS11590 PF00072 Response regulator receiver domain F3090_RS11590 PF00196 Bacterial regulatory proteins, luxR family F3090_RS11610 PF00011 Hsp20/alpha crystallin family F3090_RS11615 PF02464 Competence-damaged protein F3090_RS11620 PF00563 EAL domain F3090_RS11620 PF04940 Sensors of blue-light using FAD F3090_RS11635 PF12833 Helix-turn-helix domain F3090_RS11640 PF02447 GntP family permease F3090_RS11645 PF01261 Xylose isomerase-like TIM barrel F3090_RS11650 PF00596 Class II Aldolase and Adducin N-terminal domain F3090_RS11655 PF17042 Nucleotide-binding C-terminal domain F3090_RS11655 PF07005 Sugar-binding N-terminal domain F3090_RS11660 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase F3090_RS11660 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase F3090_RS11665 PF00455 DeoR C terminal sensor domain F3090_RS11665 PF08220 DeoR-like helix-turn-helix domain F3090_RS11680 PF02463 RecF/RecN/SMC N terminal domain F3090_RS11685 PF01306 LacY proton/sugar symporter F3090_RS11690 PF02836 Glycosyl hydrolases family 2, TIM barrel domain F3090_RS11690 PF00703 Glycosyl hydrolases family 2 F3090_RS11690 PF16353 Domain of unknown function(DUF4981) F3090_RS11690 PF02929 Beta galactosidase small chain F3090_RS11690 PF02837 Glycosyl hydrolases family 2, sugar binding domain F3090_RS11695 PF00356 Bacterial regulatory proteins, lacI family F3090_RS11710 PF01965 DJ-1/PfpI family F3090_RS11710 PF12833 Helix-turn-helix domain F3090_RS11720 PF01717 Cobalamin-independent synthase, Catalytic domain F3090_RS11725 PF13458 Periplasmic binding protein F3090_RS11730 PF02653 Branched-chain amino acid transport system / permease component F3090_RS11735 PF02653 Branched-chain amino acid transport system / permease component F3090_RS11740 PF00005 ABC transporter F3090_RS11745 PF00005 ABC transporter F3090_RS11755 PF07690 Major Facilitator Superfamily F3090_RS11760 PF00892 EamA-like transporter family F3090_RS11765 PF13999 MarB protein F3090_RS11770 PF12833 Helix-turn-helix domain F3090_RS11775 PF01047 MarR family F3090_RS11785 PF01914 MarC family integral membrane protein F3090_RS11790 PF07690 Major Facilitator Superfamily F3090_RS11795 PF02567 Phenazine biosynthesis-like protein F3090_RS11800 PF07690 Major Facilitator Superfamily F3090_RS11805 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain F3090_RS11805 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain F3090_RS11805 PF01842 ACT domain F3090_RS11810 PF00701 Dihydrodipicolinate synthetase family F3090_RS11815 PF00465 Iron-containing alcohol dehydrogenase F3090_RS11820 PF17042 Nucleotide-binding C-terminal domain F3090_RS11820 PF07005 Sugar-binding N-terminal domain F3090_RS11825 PF04166 Pyridoxal phosphate biosynthetic protein PdxA F3090_RS11830 PF08220 DeoR-like helix-turn-helix domain F3090_RS11830 PF00455 DeoR C terminal sensor domain F3090_RS11835 PF00056 lactate/malate dehydrogenase, NAD binding domain F3090_RS11835 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain F3090_RS11840 PF00583 Acetyltransferase (GNAT) family F3090_RS11845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3090_RS11845 PF03466 LysR substrate binding domain F3090_RS11850 PF00171 Aldehyde dehydrogenase family F3090_RS11855 PF04960 Glutaminase F3090_RS11860 PF13811 Domain of unknown function (DUF4186) F3090_RS11865 PF00990 Diguanylate cyclase, GGDEF domain F3090_RS11875 PF01232 Mannitol dehydrogenase Rossmann domain F3090_RS11875 PF08125 Mannitol dehydrogenase C-terminal domain F3090_RS11880 PF00583 Acetyltransferase (GNAT) family F3090_RS11895 PF13649 Methyltransferase domain F3090_RS11905 PF07690 Major Facilitator Superfamily F3090_RS11915 PF06779 Uncharacterised MFS-type transporter YbfB F3090_RS11920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3090_RS11920 PF03466 LysR substrate binding domain F3090_RS11925 PF03060 Nitronate monooxygenase F3090_RS11930 PF00528 Binding-protein-dependent transport system inner membrane component F3090_RS11935 PF09383 NIL domain F3090_RS11935 PF00005 ABC transporter F3090_RS11940 PF03180 NLPA lipoprotein F3090_RS11950 PF09905 DNA-binding protein VF530 F3090_RS11965 PF12833 Helix-turn-helix domain F3090_RS11970 PF07690 Major Facilitator Superfamily F3090_RS11975 PF00111 2Fe-2S iron-sulfur cluster binding domain F3090_RS11980 PF00355 Rieske [2Fe-2S] domain F3090_RS11985 PF03466 LysR substrate binding domain F3090_RS11985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3090_RS11990 PF01494 FAD binding domain F3090_RS11995 PF00860 Permease family F3090_RS12000 PF09349 OHCU decarboxylase F3090_RS12000 PF01014 Uricase F3090_RS12005 PF00576 HIUase/Transthyretin family F3090_RS12010 PF01381 Helix-turn-helix F3090_RS12015 PF07804 HipA-like C-terminal domain F3090_RS12015 PF13657 HipA N-terminal domain F3090_RS12020 PF02638 Glycosyl hydrolase-like 10 F3090_RS12030 PF13953 PapC C-terminal domain F3090_RS12030 PF13954 PapC N-terminal domain F3090_RS12030 PF00577 Outer membrane usher protein F3090_RS12035 PF02753 Pili assembly chaperone PapD, C-terminal domain F3090_RS12035 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain F3090_RS12050 PF00557 Metallopeptidase family M24 F3090_RS12070 PF00756 Putative esterase F3090_RS12085 PF00381 PTS HPr component phosphorylation site F3090_RS12085 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 F3090_RS12090 PF00083 Sugar (and other) transporter F3090_RS12095 PF02056 Family 4 glycosyl hydrolase F3090_RS12095 PF11975 Family 4 glycosyl hydrolase C-terminal domain F3090_RS12100 PF00367 phosphotransferase system, EIIB F3090_RS12100 PF02378 Phosphotransferase system, EIIC F3090_RS12105 PF00392 Bacterial regulatory proteins, gntR family F3090_RS12105 PF07729 FCD domain F3090_RS12115 PF03466 LysR substrate binding domain F3090_RS12115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3090_RS12120 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase F3090_RS12120 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase F3090_RS12125 PF05651 Putative sugar diacid recognition F3090_RS12125 PF17853 GGDEF-like domain F3090_RS12125 PF13556 PucR C-terminal helix-turn-helix domain F3090_RS12130 PF02595 Glycerate kinase family F3090_RS12140 PF08450 SMP-30/Gluconolactonase/LRE-like region F3090_RS12145 PF07690 Major Facilitator Superfamily F3090_RS12150 PF00108 Thiolase, N-terminal domain F3090_RS12150 PF02803 Thiolase, C-terminal domain F3090_RS12160 PF01144 Coenzyme A transferase F3090_RS12165 PF13193 AMP-binding enzyme C-terminal domain F3090_RS12165 PF00501 AMP-binding enzyme F3090_RS12175 PF07690 Major Facilitator Superfamily F3090_RS12180 PF00294 pfkB family carbohydrate kinase F3090_RS12185 PF00834 Ribulose-phosphate 3 epimerase family F3090_RS12190 PF00455 DeoR C terminal sensor domain F3090_RS12190 PF08220 DeoR-like helix-turn-helix domain F3090_RS12195 PF01791 DeoC/LacD family aldolase F3090_RS12200 PF00370 FGGY family of carbohydrate kinases, N-terminal domain F3090_RS12200 PF02782 FGGY family of carbohydrate kinases, C-terminal domain F3090_RS12205 PF00455 DeoR C terminal sensor domain F3090_RS12205 PF08220 DeoR-like helix-turn-helix domain F3090_RS12245 PF00248 Aldo/keto reductase family F3090_RS12250 PF00248 Aldo/keto reductase family F3090_RS12255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3090_RS12255 PF03466 LysR substrate binding domain F3090_RS12260 PF13673 Acetyltransferase (GNAT) domain F3090_RS12260 PF04229 GrpB protein F3090_RS12265 PF02954 Bacterial regulatory protein, Fis family F3090_RS12265 PF00072 Response regulator receiver domain F3090_RS12265 PF14532 Sigma-54 interaction domain F3090_RS12270 PF00672 HAMP domain F3090_RS12270 PF00512 His Kinase A (phospho-acceptor) domain F3090_RS12270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3090_RS12280 PF07690 Major Facilitator Superfamily F3090_RS12285 PF01476 LysM domain F3090_RS12285 PF04972 BON domain F3090_RS12290 PF01810 LysE type translocator F3090_RS12300 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit F3090_RS12310 PF00834 Ribulose-phosphate 3 epimerase family F3090_RS12315 PF03611 PTS system sugar-specific permease component F3090_RS12325 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 F3090_RS12330 PF00356 Bacterial regulatory proteins, lacI family F3090_RS12340 PF07690 Major Facilitator Superfamily F3090_RS12355 PF00440 Bacterial regulatory proteins, tetR family F3090_RS12370 PF07690 Major Facilitator Superfamily F3090_RS12370 PF00083 Sugar (and other) transporter F3090_RS12375 PF13454 FAD-NAD(P)-binding F3090_RS12380 PF00724 NADH:flavin oxidoreductase / NADH oxidase family F3090_RS12390 PF03466 LysR substrate binding domain F3090_RS12390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3090_RS12395 PF03060 Nitronate monooxygenase F3090_RS12400 PF07687 Peptidase dimerisation domain F3090_RS12400 PF01546 Peptidase family M20/M25/M40 F3090_RS12405 PF00266 Aminotransferase class-V F3090_RS12410 PF00005 ABC transporter F3090_RS12415 PF00528 Binding-protein-dependent transport system inner membrane component F3090_RS12420 PF00528 Binding-protein-dependent transport system inner membrane component F3090_RS12445 PF01425 Amidase F3090_RS12460 PF01118 Semialdehyde dehydrogenase, NAD binding domain F3090_RS12460 PF02774 Semialdehyde dehydrogenase, dimerisation domain F3090_RS12480 PF02801 Beta-ketoacyl synthase, C-terminal domain F3090_RS12480 PF00109 Beta-ketoacyl synthase, N-terminal domain F3090_RS12495 PF12833 Helix-turn-helix domain F3090_RS12495 PF02311 AraC-like ligand binding domain F3090_RS12500 PF00117 Glutamine amidotransferase class-I F3090_RS12505 PF00106 short chain dehydrogenase F3090_RS12515 PF00300 Histidine phosphatase superfamily (branch 1) F3090_RS12555 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin F3090_RS12560 PF01979 Amidohydrolase family F3090_RS12565 PF00990 Diguanylate cyclase, GGDEF domain F3090_RS12565 PF08448 PAS fold F3090_RS12570 PF00356 Bacterial regulatory proteins, lacI family F3090_RS12580 PF02894 Oxidoreductase family, C-terminal alpha/beta domain F3090_RS12580 PF01408 Oxidoreductase family, NAD-binding Rossmann fold F3090_RS12595 PF03070 TENA/THI-4/PQQC family F3090_RS12600 PF00005 ABC transporter F3090_RS12605 PF00528 Binding-protein-dependent transport system inner membrane component F3090_RS12610 PF09084 NMT1/THI5 like F3090_RS12615 PF00202 Aminotransferase class-III F3090_RS12620 PF00282 Pyridoxal-dependent decarboxylase conserved domain F3090_RS12630 PF17991 Thioredoxin like C-terminal domain F3090_RS12630 PF02683 Cytochrome C biogenesis protein transmembrane region F3090_RS12630 PF00578 AhpC/TSA family F3090_RS12635 PF00512 His Kinase A (phospho-acceptor) domain F3090_RS12635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3090_RS12635 PF00672 HAMP domain F3090_RS12640 PF00486 Transcriptional regulatory protein, C terminal F3090_RS12640 PF00072 Response regulator receiver domain F3090_RS12650 PF01244 Membrane dipeptidase (Peptidase family M19) F3090_RS12655 PF08042 PqqA family F3090_RS12660 PF12706 Beta-lactamase superfamily domain F3090_RS12665 PF03070 TENA/THI-4/PQQC family F3090_RS12670 PF05402 Coenzyme PQQ synthesis protein D (PqqD) F3090_RS12675 PF13186 Iron-sulfur cluster-binding domain F3090_RS12675 PF04055 Radical SAM superfamily F3090_RS12680 PF00675 Insulinase (Peptidase family M16) F3090_RS12685 PF00958 GMP synthase C terminal domain F3090_RS12685 PF00117 Glutamine amidotransferase class-I F3090_RS12685 PF02540 NAD synthase F3090_RS12690 PF03717 Penicillin-binding Protein dimerisation domain F3090_RS12690 PF00905 Penicillin binding protein transpeptidase domain F3090_RS12705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3090_RS12705 PF03466 LysR substrate binding domain F3090_RS12710 PF00141 Peroxidase F3090_RS12715 PF03969 AFG1-like ATPase F3090_RS12720 PF02308 MgtC family F3090_RS12725 PF00083 Sugar (and other) transporter F3090_RS12730 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit F3090_RS12735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3090_RS12735 PF03466 LysR substrate binding domain F3090_RS12740 PF00384 Molybdopterin oxidoreductase F3090_RS12745 PF01062 Bestrophin, RFP-TM, chloride channel F3090_RS12750 PF01545 Cation efflux family F3090_RS12750 PF16916 Dimerisation domain of Zinc Transporter F3090_RS12770 PF02566 OsmC-like protein F3090_RS12780 PF04076 Bacterial OB fold (BOF) protein F3090_RS12790 PF04239 Protein of unknown function (DUF421) F3090_RS12795 PF00106 short chain dehydrogenase F3090_RS12800 PF16657 Maltogenic Amylase, C-terminal domain F3090_RS12800 PF00128 Alpha amylase, catalytic domain F3090_RS12810 PF05974 Domain of unknown function (DUF892) F3090_RS12820 PF10685 Stress-induced bacterial acidophilic repeat motif F3090_RS12830 PF10820 Protein of unknown function (DUF2543) F3090_RS12835 PF03466 LysR substrate binding domain F3090_RS12835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3090_RS12845 PF08136 30S ribosomal protein subunit S22 family F3090_RS12855 PF00390 Malic enzyme, N-terminal domain F3090_RS12855 PF03949 Malic enzyme, NAD binding domain F3090_RS12870 PF12848 ABC transporter F3090_RS12870 PF00005 ABC transporter F3090_RS12880 PF00719 Inorganic pyrophosphatase F3090_RS12885 PF00107 Zinc-binding dehydrogenase F3090_RS12885 PF08240 Alcohol dehydrogenase GroES-like domain F3090_RS12890 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F3090_RS12895 PF00528 Binding-protein-dependent transport system inner membrane component F3090_RS12900 PF00528 Binding-protein-dependent transport system inner membrane component F3090_RS12900 PF12911 N-terminal TM domain of oligopeptide transport permease C F3090_RS12905 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F3090_RS12905 PF00005 ABC transporter F3090_RS12910 PF00296 Luciferase-like monooxygenase F3090_RS12920 PF07690 Major Facilitator Superfamily F3090_RS12945 PF01292 Prokaryotic cytochrome b561 F3090_RS12950 PF13247 4Fe-4S dicluster domain F3090_RS12950 PF12800 4Fe-4S binding domain F3090_RS12950 PF09163 Formate dehydrogenase N, transmembrane F3090_RS12960 PF00892 EamA-like transporter family F3090_RS12965 PF00106 short chain dehydrogenase F3090_RS12970 PF00175 Oxidoreductase NAD-binding domain F3090_RS12970 PF00111 2Fe-2S iron-sulfur cluster binding domain F3090_RS12970 PF00970 Oxidoreductase FAD-binding domain F3090_RS12975 PF00866 Ring hydroxylating beta subunit F3090_RS12980 PF00355 Rieske [2Fe-2S] domain F3090_RS12980 PF00848 Ring hydroxylating alpha subunit (catalytic domain) F3090_RS12985 PF00775 Dioxygenase F3090_RS12985 PF04444 Catechol dioxygenase N terminus F3090_RS12990 PF02426 Muconolactone delta-isomerase F3090_RS12995 PF13378 Enolase C-terminal domain-like F3090_RS12995 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain F3090_RS13000 PF09339 IclR helix-turn-helix domain F3090_RS13000 PF01614 Bacterial transcriptional regulator F3090_RS13005 PF07690 Major Facilitator Superfamily F3090_RS13015 PF07690 Major Facilitator Superfamily F3090_RS13020 PF14710 Respiratory nitrate reductase alpha N-terminal F3090_RS13020 PF01568 Molydopterin dinucleotide binding domain F3090_RS13020 PF00384 Molybdopterin oxidoreductase F3090_RS13025 PF13247 4Fe-4S dicluster domain F3090_RS13025 PF14711 Respiratory nitrate reductase beta C-terminal F3090_RS13030 PF02613 Nitrate reductase delta subunit F3090_RS13035 PF02665 Nitrate reductase gamma subunit F3090_RS13040 PF00797 N-acetyltransferase F3090_RS13045 PF00528 Binding-protein-dependent transport system inner membrane component F3090_RS13055 PF00005 ABC transporter F3090_RS13055 PF17912 MalK OB fold domain F3090_RS13060 PF01613 Flavin reductase like domain F3090_RS13065 PF02311 AraC-like ligand binding domain F3090_RS13065 PF12833 Helix-turn-helix domain F3090_RS13080 PF11471 Maltoporin periplasmic N-terminal extension F3090_RS13080 PF02264 LamB porin F3090_RS13090 PF01361 Tautomerase enzyme F3090_RS13095 PF13417 Glutathione S-transferase, N-terminal domain F3090_RS13105 PF00005 ABC transporter F3090_RS13110 PF00528 Binding-protein-dependent transport system inner membrane component F3090_RS13120 PF00497 Bacterial extracellular solute-binding proteins, family 3 F3090_RS13125 PF00296 Luciferase-like monooxygenase F3090_RS13130 PF01546 Peptidase family M20/M25/M40 F3090_RS13130 PF07687 Peptidase dimerisation domain F3090_RS13135 PF00296 Luciferase-like monooxygenase F3090_RS13140 PF01202 Shikimate kinase F3090_RS13145 PF03466 LysR substrate binding domain F3090_RS13145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3090_RS13150 PF00324 Amino acid permease F3090_RS13165 PF00593 TonB dependent receptor F3090_RS13165 PF07715 TonB-dependent Receptor Plug Domain F3090_RS13175 PF04175 Protein of unknown function (DUF406) F3090_RS13185 PF01156 Inosine-uridine preferring nucleoside hydrolase F3090_RS13190 PF00107 Zinc-binding dehydrogenase F3090_RS13190 PF16884 N-terminal domain of oxidoreductase F3090_RS13195 PF01381 Helix-turn-helix F3090_RS13195 PF08671 Anti-repressor SinI F3090_RS13200 PF00583 Acetyltransferase (GNAT) family F3090_RS13205 PF04657 Putative inner membrane exporter, YdcZ F3090_RS13210 PF10735 Protein of unknown function (DUF2526) F3090_RS13215 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F3090_RS13220 PF00171 Aldehyde dehydrogenase family F3090_RS13225 PF00561 alpha/beta hydrolase fold F3090_RS13225 PF00364 Biotin-requiring enzyme F3090_RS13230 PF10753 Toxin GhoT_OrtT F3090_RS13255 PF00171 Aldehyde dehydrogenase family F3090_RS13260 PF00528 Binding-protein-dependent transport system inner membrane component F3090_RS13265 PF00528 Binding-protein-dependent transport system inner membrane component F3090_RS13270 PF00005 ABC transporter F3090_RS13270 PF08402 TOBE domain F3090_RS13275 PF13416 Bacterial extracellular solute-binding protein F3090_RS13280 PF00155 Aminotransferase class I and II F3090_RS13280 PF00392 Bacterial regulatory proteins, gntR family F3090_RS13285 PF01654 Cytochrome bd terminal oxidase subunit I F3090_RS13290 PF02322 Cytochrome bd terminal oxidase subunit II F3090_RS13310 PF12392 Collagenase F3090_RS13310 PF01136 Peptidase family U32 F3090_RS13320 PF07883 Cupin domain F3090_RS13320 PF01381 Helix-turn-helix F3090_RS13325 PF03594 Benzoate membrane transport protein F3090_RS13330 PF06445 GyrI-like small molecule binding domain F3090_RS13330 PF12833 Helix-turn-helix domain F3090_RS13340 PF11769 Protein of unknown function (DUF3313) F3090_RS13345 PF03848 Tellurite resistance protein TehB F3090_RS13350 PF03595 Voltage-dependent anion channel F3090_RS13355 PF18836 Beta solenoid repeat from YDCK F3090_RS13360 PF13302 Acetyltransferase (GNAT) domain F3090_RS13365 PF04349 Periplasmic glucan biosynthesis protein, MdoG F3090_RS13370 PF00107 Zinc-binding dehydrogenase F3090_RS13370 PF08240 Alcohol dehydrogenase GroES-like domain F3090_RS13375 PF00135 Carboxylesterase family F3090_RS13380 PF07063 Domain of unknown function (DUF1338) F3090_RS13385 PF00775 Dioxygenase F3090_RS13385 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal F3090_RS13390 PF00775 Dioxygenase F3090_RS13395 PF03466 LysR substrate binding domain F3090_RS13395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3090_RS13400 PF01011 PQQ enzyme repeat F3090_RS13405 PF00107 Zinc-binding dehydrogenase F3090_RS13405 PF08240 Alcohol dehydrogenase GroES-like domain F3090_RS13410 PF02583 Metal-sensitive transcriptional repressor F3090_RS13415 PF01292 Prokaryotic cytochrome b561 F3090_RS13430 PF01638 HxlR-like helix-turn-helix F3090_RS13435 PF07690 Major Facilitator Superfamily F3090_RS13440 PF00962 Adenosine/AMP deaminase F3090_RS13445 PF01408 Oxidoreductase family, NAD-binding Rossmann fold F3090_RS13445 PF02894 Oxidoreductase family, C-terminal alpha/beta domain F3090_RS13455 PF00232 Glycosyl hydrolase family 1 F3090_RS13460 PF05321 Haemolysin expression modulating protein F3090_RS13465 PF10754 Protein of unknown function (DUF2569) F3090_RS13470 PF02508 Rnf-Nqr subunit, membrane protein F3090_RS13475 PF04060 Putative Fe-S cluster F3090_RS13480 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit F3090_RS13480 PF12838 4Fe-4S dicluster domain F3090_RS13480 PF13375 RnfC Barrel sandwich hybrid domain F3090_RS13480 PF10531 SLBB domain F3090_RS13485 PF03116 NQR2, RnfD, RnfE family F3090_RS13490 PF04205 FMN-binding domain F3090_RS13495 PF02508 Rnf-Nqr subunit, membrane protein F3090_RS13500 PF00730 HhH-GPD superfamily base excision DNA repair protein F3090_RS13500 PF00633 Helix-hairpin-helix motif F3090_RS13500 PF10576 Iron-sulfur binding domain of endonuclease III F3090_RS13505 PF00854 POT family F3090_RS13510 PF02798 Glutathione S-transferase, N-terminal domain F3090_RS13510 PF00043 Glutathione S-transferase, C-terminal domain F3090_RS13515 PF08543 Phosphomethylpyrimidine kinase F3090_RS13520 PF00579 tRNA synthetases class I (W and Y) F3090_RS13525 PF01243 Pyridoxamine 5'-phosphate oxidase F3090_RS13525 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region F3090_RS13530 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme F3090_RS13535 PF03702 Anhydro-N-acetylmuramic acid kinase F3090_RS13540 PF05433 Glycine zipper 2TM domain F3090_RS13545 PF00990 Diguanylate cyclase, GGDEF domain F3090_RS13545 PF17158 Membrane-associated sensor, integral membrane domain F3090_RS13550 PF01047 MarR family F3090_RS13555 PF07869 Protein of unknown function (DUF1656) F3090_RS13560 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion F3090_RS13560 PF00529 HlyD membrane-fusion protein of T1SS F3090_RS13565 PF04632 Fusaric acid resistance protein family F3090_RS13570 PF00080 Copper/zinc superoxide dismutase (SODC) F3090_RS13575 PF00248 Aldo/keto reductase family F3090_RS13580 PF06945 Protein of unknown function (DUF1289) F3090_RS13585 PF00440 Bacterial regulatory proteins, tetR family F3090_RS13585 PF16925 Tetracyclin repressor-like, C-terminal domain F3090_RS13590 PF00724 NADH:flavin oxidoreductase / NADH oxidase family F3090_RS13595 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily F3090_RS13600 PF00929 Exonuclease F3090_RS13605 PF00462 Glutaredoxin F3090_RS13610 PF00877 NlpC/P60 family F3090_RS13620 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain F3090_RS13620 PF02777 Iron/manganese superoxide dismutases, C-terminal domain F3090_RS13625 PF07690 Major Facilitator Superfamily F3090_RS13635 PF00356 Bacterial regulatory proteins, lacI family F3090_RS13640 PF03466 LysR substrate binding domain F3090_RS13640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3090_RS13645 PF07690 Major Facilitator Superfamily F3090_RS13655 PF00677 Lumazine binding domain F3090_RS13660 PF01554 MatE F3090_RS13670 PF03641 Possible lysine decarboxylase F3090_RS13695 PF00106 short chain dehydrogenase F3090_RS13705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3090_RS13705 PF03466 LysR substrate binding domain F3090_RS13715 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain F3090_RS13715 PF10996 Beta-Casp domain F3090_RS13715 PF00753 Metallo-beta-lactamase superfamily F3090_RS13740 PF00484 Carbonic anhydrase F3090_RS13750 PF00455 DeoR C terminal sensor domain F3090_RS13750 PF08220 DeoR-like helix-turn-helix domain F3090_RS13755 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily F3090_RS13765 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F3090_RS13770 PF00528 Binding-protein-dependent transport system inner membrane component F3090_RS13775 PF00528 Binding-protein-dependent transport system inner membrane component F3090_RS13780 PF00005 ABC transporter F3090_RS13780 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F3090_RS13785 PF00005 ABC transporter F3090_RS13785 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F3090_RS13805 PF07690 Major Facilitator Superfamily F3090_RS13810 PF03466 LysR substrate binding domain F3090_RS13810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3090_RS13820 PF01979 Amidohydrolase family F3090_RS13830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3090_RS13830 PF03466 LysR substrate binding domain F3090_RS13835 PF00111 2Fe-2S iron-sulfur cluster binding domain F3090_RS13840 PF07969 Amidohydrolase family F3090_RS13845 PF01042 Endoribonuclease L-PSP F3090_RS13850 PF02633 Creatinine amidohydrolase F3090_RS13860 PF00005 ABC transporter F3090_RS13865 PF00528 Binding-protein-dependent transport system inner membrane component F3090_RS13890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3090_RS13890 PF03466 LysR substrate binding domain F3090_RS13895 PF01144 Coenzyme A transferase F3090_RS13900 PF01144 Coenzyme A transferase F3090_RS13905 PF00108 Thiolase, N-terminal domain F3090_RS13905 PF02803 Thiolase, C-terminal domain F3090_RS13910 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain F3090_RS13910 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain F3090_RS13920 PF00106 short chain dehydrogenase F3090_RS13925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3090_RS13925 PF03466 LysR substrate binding domain F3090_RS13930 PF03306 Alpha-acetolactate decarboxylase F3090_RS13935 PF00205 Thiamine pyrophosphate enzyme, central domain F3090_RS13935 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain F3090_RS13935 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain F3090_RS13940 PF00106 short chain dehydrogenase F3090_RS13950 PF00873 AcrB/AcrD/AcrF family F3090_RS13965 PF00486 Transcriptional regulatory protein, C terminal F3090_RS13965 PF00072 Response regulator receiver domain F3090_RS13970 PF00672 HAMP domain F3090_RS13970 PF00512 His Kinase A (phospho-acceptor) domain F3090_RS13970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3090_RS13985 PF03544 Gram-negative bacterial TonB protein C-terminal F3090_RS14005 PF03918 Cytochrome C biogenesis protein F3090_RS14010 PF08534 Redoxin F3090_RS14015 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal F3090_RS14015 PF01578 Cytochrome C assembly protein F3090_RS14020 PF03100 CcmE F3090_RS14030 PF01578 Cytochrome C assembly protein F3090_RS14035 PF03379 CcmB protein F3090_RS14040 PF00005 ABC transporter F3090_RS14045 PF13442 Cytochrome C oxidase, cbb3-type, subunit III F3090_RS14045 PF00034 Cytochrome c F3090_RS14050 PF05199 GMC oxidoreductase F3090_RS14050 PF00732 GMC oxidoreductase F3090_RS14055 PF13618 Gluconate 2-dehydrogenase subunit 3 F3090_RS14065 PF08402 TOBE domain F3090_RS14065 PF00005 ABC transporter F3090_RS14080 PF02615 Malate/L-lactate dehydrogenase F3090_RS14085 PF01568 Molydopterin dinucleotide binding domain F3090_RS14085 PF00384 Molybdopterin oxidoreductase F3090_RS14085 PF04879 Molybdopterin oxidoreductase Fe4S4 domain F3090_RS14110 PF07690 Major Facilitator Superfamily F3090_RS14125 PF00005 ABC transporter F3090_RS14130 PF00528 Binding-protein-dependent transport system inner membrane component F3090_RS14135 PF00497 Bacterial extracellular solute-binding proteins, family 3 F3090_RS14150 PF01032 FecCD transport family F3090_RS14155 PF01032 FecCD transport family F3090_RS14160 PF00005 ABC transporter F3090_RS14165 PF07715 TonB-dependent Receptor Plug Domain F3090_RS14170 PF00005 ABC transporter F3090_RS14175 PF00528 Binding-protein-dependent transport system inner membrane component F3090_RS14195 PF00296 Luciferase-like monooxygenase F3090_RS14200 PF03466 LysR substrate binding domain F3090_RS14200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3090_RS14205 PF05995 Cysteine dioxygenase type I F3090_RS14215 PF02578 Multi-copper polyphenol oxidoreductase laccase F3090_RS14220 PF07690 Major Facilitator Superfamily F3090_RS14225 PF00682 HMGL-like F3090_RS14225 PF07836 DmpG-like communication domain F3090_RS14230 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation F3090_RS14230 PF01118 Semialdehyde dehydrogenase, NAD binding domain F3090_RS14235 PF01557 Fumarylacetoacetate (FAA) hydrolase family F3090_RS14240 PF12697 Alpha/beta hydrolase family F3090_RS14245 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase F3090_RS14250 PF01494 FAD binding domain F3090_RS14255 PF09339 IclR helix-turn-helix domain F3090_RS14255 PF01614 Bacterial transcriptional regulator F3090_RS14260 PF01497 Periplasmic binding protein F3090_RS14265 PF01032 FecCD transport family F3090_RS14270 PF00005 ABC transporter F3090_RS14280 PF18317 Shikimate 5'-dehydrogenase C-terminal domain F3090_RS14280 PF08501 Shikimate dehydrogenase substrate binding domain F3090_RS14280 PF01488 Shikimate / quinate 5-dehydrogenase F3090_RS14285 PF07690 Major Facilitator Superfamily F3090_RS14290 PF01261 Xylose isomerase-like TIM barrel F3090_RS14290 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily F3090_RS14295 PF17926 Tetracyclin repressor-like, C-terminal domain F3090_RS14295 PF00440 Bacterial regulatory proteins, tetR family F3090_RS14300 PF10965 Protein of unknown function (DUF2767) F3090_RS14315 PF00224 Pyruvate kinase, barrel domain F3090_RS14315 PF02887 Pyruvate kinase, alpha/beta domain F3090_RS14320 PF04728 Lipoprotein leucine-zipper F3090_RS14325 PF17969 L,D-transpeptidase C-terminal domain F3090_RS14325 PF03734 L,D-transpeptidase catalytic domain F3090_RS14325 PF01476 LysM domain F3090_RS14330 PF02657 Fe-S metabolism associated domain F3090_RS14335 PF00266 Aminotransferase class-V F3090_RS14340 PF01458 Uncharacterized protein family (UPF0051) F3090_RS14345 PF00005 ABC transporter F3090_RS14350 PF01458 Uncharacterized protein family (UPF0051) F3090_RS14355 PF01521 Iron-sulphur cluster biosynthesis F3090_RS14375 PF00440 Bacterial regulatory proteins, tetR family F3090_RS14380 PF01070 FMN-dependent dehydrogenase F3090_RS14385 PF00873 AcrB/AcrD/AcrF family F3090_RS14405 PF03466 LysR substrate binding domain F3090_RS14405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3090_RS14415 PF01032 FecCD transport family F3090_RS14420 PF00005 ABC transporter F3090_RS14425 PF07690 Major Facilitator Superfamily F3090_RS14430 PF01717 Cobalamin-independent synthase, Catalytic domain F3090_RS14430 PF08267 Cobalamin-independent synthase, N-terminal domain F3090_RS14445 PF04226 Transglycosylase associated protein F3090_RS14450 PF03061 Thioesterase superfamily F3090_RS14455 PF02913 FAD linked oxidases, C-terminal domain F3090_RS14455 PF13183 4Fe-4S dicluster domain F3090_RS14455 PF01565 FAD binding domain F3090_RS14460 PF01594 AI-2E family transporter F3090_RS14470 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain F3090_RS14470 PF00391 PEP-utilising enzyme, mobile domain F3090_RS14470 PF02896 PEP-utilising enzyme, TIM barrel domain F3090_RS14480 PF03618 Kinase/pyrophosphorylase F3090_RS14485 PF00793 DAHP synthetase I family F3090_RS14490 PF10636 Hemin uptake protein hemP F3090_RS14495 PF02696 Uncharacterized ACR, YdiU/UPF0061 family F3090_RS14500 PF00877 NlpC/P60 family F3090_RS14505 PF00005 ABC transporter F3090_RS14510 PF00255 Glutathione peroxidase F3090_RS14515 PF03180 NLPA lipoprotein F3090_RS14520 PF01032 FecCD transport family F3090_RS14530 PF03466 LysR substrate binding domain F3090_RS14530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3090_RS14535 PF01266 FAD dependent oxidoreductase F3090_RS14545 PF00216 Bacterial DNA-binding protein F3090_RS14550 PF03484 tRNA synthetase B5 domain F3090_RS14550 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain F3090_RS14550 PF03483 B3/4 domain F3090_RS14550 PF01588 Putative tRNA binding domain F3090_RS14550 PF03147 Ferredoxin-fold anticodon binding domain F3090_RS14555 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain F3090_RS14555 PF01409 tRNA synthetases class II core domain (F) F3090_RS14565 PF00453 Ribosomal protein L20 F3090_RS14570 PF01632 Ribosomal protein L35 F3090_RS14575 PF00707 Translation initiation factor IF-3, C-terminal domain F3090_RS14575 PF05198 Translation initiation factor IF-3, N-terminal domain F3090_RS14580 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain F3090_RS14580 PF02824 TGS domain F3090_RS14580 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) F3090_RS14580 PF03129 Anticodon binding domain F3090_RS14590 PF04338 Protein of unknown function, DUF481 F3090_RS14595 PF00294 pfkB family carbohydrate kinase F3090_RS14600 PF11080 Endoribonuclease GhoS F3090_RS14605 PF03881 Fructosamine kinase F3090_RS14610 PF03544 Gram-negative bacterial TonB protein C-terminal F3090_RS14615 PF03795 YCII-related domain F3090_RS14625 PF04264 YceI-like domain F3090_RS14635 PF13091 PLD-like domain F3090_RS14635 PF13396 Phospholipase_D-nuclease N-terminal F3090_RS14640 PF04269 Protein of unknown function, DUF440 F3090_RS14645 PF00520 Ion transport protein F3090_RS14645 PF00027 Cyclic nucleotide-binding domain F3090_RS14650 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F3090_RS14650 PF00005 ABC transporter F3090_RS14655 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F3090_RS14655 PF00005 ABC transporter F3090_RS14660 PF12911 N-terminal TM domain of oligopeptide transport permease C F3090_RS14660 PF00528 Binding-protein-dependent transport system inner membrane component F3090_RS14665 PF00528 Binding-protein-dependent transport system inner membrane component F3090_RS14670 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F3090_RS14675 PF01914 MarC family integral membrane protein F3090_RS14685 PF00171 Aldehyde dehydrogenase family F3090_RS14685 PF00465 Iron-containing alcohol dehydrogenase F3090_RS14690 PF00265 Thymidine kinase F3090_RS14700 PF00816 H-NS histone family F3090_RS14705 PF00483 Nucleotidyl transferase F3090_RS14710 PF00072 Response regulator receiver domain F3090_RS14715 PF01734 Patatin-like phospholipase F3090_RS14720 PF02810 SEC-C motif F3090_RS14725 PF01842 ACT domain F3090_RS14725 PF00551 Formyl transferase F3090_RS14755 PF01037 Lrp/AsnC ligand binding domain F3090_RS14765 PF02665 Nitrate reductase gamma subunit F3090_RS14770 PF02613 Nitrate reductase delta subunit F3090_RS14775 PF13247 4Fe-4S dicluster domain F3090_RS14775 PF14711 Respiratory nitrate reductase beta C-terminal F3090_RS14780 PF00384 Molybdopterin oxidoreductase F3090_RS14780 PF01568 Molydopterin dinucleotide binding domain F3090_RS14780 PF14710 Respiratory nitrate reductase alpha N-terminal F3090_RS14790 PF07690 Major Facilitator Superfamily F3090_RS14795 PF00672 HAMP domain F3090_RS14795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3090_RS14795 PF07730 Histidine kinase F3090_RS14795 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term F3090_RS14800 PF00196 Bacterial regulatory proteins, luxR family F3090_RS14800 PF00072 Response regulator receiver domain F3090_RS14805 PF11924 Inverse autotransporter, beta-domain F3090_RS14810 PF04324 BFD-like [2Fe-2S] binding domain F3090_RS14810 PF04879 Molybdopterin oxidoreductase Fe4S4 domain F3090_RS14810 PF01568 Molydopterin dinucleotide binding domain F3090_RS14810 PF00384 Molybdopterin oxidoreductase F3090_RS14815 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain F3090_RS14815 PF07992 Pyridine nucleotide-disulphide oxidoreductase F3090_RS14815 PF01077 Nitrite and sulphite reductase 4Fe-4S domain F3090_RS14815 PF13806 Rieske-like [2Fe-2S] domain F3090_RS14815 PF18267 Rubredoxin NAD+ reductase C-terminal domain F3090_RS14815 PF04324 BFD-like [2Fe-2S] binding domain F3090_RS14820 PF00005 ABC transporter F3090_RS14825 PF00528 Binding-protein-dependent transport system inner membrane component F3090_RS14835 PF08376 Nitrate and nitrite sensing F3090_RS14835 PF03861 ANTAR domain F3090_RS14840 PF02635 DsrE/DsrF-like family F3090_RS14850 PF04752 ChaC-like protein F3090_RS14855 PF06150 ChaB F3090_RS14860 PF01699 Sodium/calcium exchanger protein F3090_RS14865 PF00793 DAHP synthetase I family F3090_RS14870 PF13369 Transglutaminase-like superfamily F3090_RS14875 PF04247 Invasion gene expression up-regulator, SirB F3090_RS14880 PF13847 Methyltransferase domain F3090_RS14880 PF17827 PrmC N-terminal domain F3090_RS14885 PF00472 RF-1 domain F3090_RS14885 PF03462 PCRF domain F3090_RS14890 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain F3090_RS14890 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain F3090_RS14890 PF01488 Shikimate / quinate 5-dehydrogenase F3090_RS14895 PF03550 Outer membrane lipoprotein LolB F3090_RS14900 PF08544 GHMP kinases C terminal F3090_RS14900 PF00288 GHMP kinases N terminal domain F3090_RS14905 PF14572 Phosphoribosyl synthetase-associated domain F3090_RS14905 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase F3090_RS14910 PF01740 STAS domain F3090_RS14910 PF00916 Sulfate permease family F3090_RS14920 PF10762 Protein of unknown function (DUF2583) F3090_RS14925 PF01195 Peptidyl-tRNA hydrolase F3090_RS14930 PF01926 50S ribosome-binding GTPase F3090_RS14930 PF06071 Protein of unknown function (DUF933) F3090_RS14940 PF13407 Periplasmic binding protein domain F3090_RS15020 PF03781 Sulfatase-modifying factor enzyme 1 F3090_RS15055 PF13296 Putative type VI secretion system Rhs element Vgr F3090_RS15055 PF04717 Type VI secretion system, phage-baseplate injector F3090_RS15055 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) F3090_RS15060 PF05598 Transposase domain (DUF772) F3090_RS15060 PF01609 Transposase DDE domain F3090_RS15070 PF00691 OmpA family F3090_RS15070 PF13488 Glycine zipper F3090_RS15090 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) F3090_RS15095 PF00849 RNA pseudouridylate synthase F3090_RS15105 PF03466 LysR substrate binding domain F3090_RS15105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3090_RS15115 PF07690 Major Facilitator Superfamily F3090_RS15120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3090_RS15120 PF03466 LysR substrate binding domain F3090_RS15130 PF01293 Phosphoenolpyruvate carboxykinase F3090_RS15135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3090_RS15135 PF03466 LysR substrate binding domain F3090_RS15140 PF00005 ABC transporter F3090_RS15145 PF12399 Branched-chain amino acid ATP-binding cassette transporter F3090_RS15145 PF00005 ABC transporter F3090_RS15150 PF11862 Domain of unknown function (DUF3382) F3090_RS15150 PF02653 Branched-chain amino acid transport system / permease component F3090_RS15155 PF02653 Branched-chain amino acid transport system / permease component F3090_RS15160 PF13458 Periplasmic binding protein F3090_RS15170 PF02901 Pyruvate formate lyase-like F3090_RS15170 PF01228 Glycine radical F3090_RS15175 PF00871 Acetokinase family F3090_RS15180 PF03222 Tryptophan/tyrosine permease family F3090_RS15185 PF00291 Pyridoxal-phosphate dependent enzyme F3090_RS15190 PF03466 LysR substrate binding domain F3090_RS15190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3090_RS15230 PF14403 Circularly permuted ATP-grasp type 2 F3090_RS15240 PF01204 Trehalase F3090_RS15245 PF07715 TonB-dependent Receptor Plug Domain F3090_RS15245 PF00593 TonB dependent receptor F3090_RS15250 PF01464 Transglycosylase SLT domain F3090_RS15255 PF17676 LD-carboxypeptidase C-terminal domain F3090_RS15255 PF02016 LD-carboxypeptidase N-terminal domain F3090_RS15260 PF03471 Transporter associated domain F3090_RS15260 PF00999 Sodium/hydrogen exchanger family F3090_RS15260 PF02080 TrkA-C domain F3090_RS15265 PF01168 Alanine racemase, N-terminal domain F3090_RS15265 PF00842 Alanine racemase, C-terminal domain F3090_RS15270 PF01266 FAD dependent oxidoreductase F3090_RS15280 PF04293 SpoVR like protein F3090_RS15285 PF07840 FadR C-terminal domain F3090_RS15285 PF00392 Bacterial regulatory proteins, gntR family F3090_RS15290 PF06450 Bacterial Na+/H+ antiporter B (NhaB) F3090_RS15295 PF02600 Disulfide bond formation protein DsbB F3090_RS15305 PF03692 Putative zinc- or iron-chelating domain F3090_RS15310 PF01557 Fumarylacetoacetate (FAA) hydrolase family F3090_RS15315 PF05166 YcgL domain F3090_RS15320 PF05209 Septum formation inhibitor MinC, N-terminal domain F3090_RS15320 PF03775 Septum formation inhibitor MinC, C-terminal domain F3090_RS15325 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain F3090_RS15330 PF03776 Septum formation topological specificity factor MinE F3090_RS15335 PF00570 HRDC domain F3090_RS15335 PF01612 3'-5' exonuclease F3090_RS15340 PF13193 AMP-binding enzyme C-terminal domain F3090_RS15340 PF00501 AMP-binding enzyme F3090_RS15345 PF03843 Outer membrane lipoprotein Slp family F3090_RS15350 PF00814 Glycoprotease family F3090_RS15355 PF04851 Type III restriction enzyme, res subunit F3090_RS15355 PF13307 Helicase C-terminal domain F3090_RS15360 PF01042 Endoribonuclease L-PSP F3090_RS15365 PF03701 Uncharacterised protein family (UPF0181) F3090_RS15370 PF00425 chorismate binding enzyme F3090_RS15370 PF04715 Anthranilate synthase component I, N terminal region F3090_RS15375 PF00293 NUDIX domain F3090_RS15380 PF03313 Serine dehydratase alpha chain F3090_RS15380 PF03315 Serine dehydratase beta chain F3090_RS15385 PF00563 EAL domain F3090_RS15385 PF12792 CSS motif domain associated with EAL F3090_RS15390 PF03471 Transporter associated domain F3090_RS15390 PF03741 Integral membrane protein TerC family F3090_RS15395 PF03610 PTS system fructose IIA component F3090_RS15395 PF03830 PTS system sorbose subfamily IIB component F3090_RS15400 PF03609 PTS system sorbose-specific iic component F3090_RS15405 PF03613 PTS system mannose/fructose/sorbose family IID component F3090_RS15415 PF13737 Transposase DDE domain F3090_RS15420 PF06173 Protein of unknown function (DUF986) F3090_RS15425 PF02659 Putative manganese efflux pump F3090_RS15430 PF13847 Methyltransferase domain F3090_RS15435 PF03717 Penicillin-binding Protein dimerisation domain F3090_RS15435 PF00905 Penicillin binding protein transpeptidase domain F3090_RS15440 PF00313 'Cold-shock' DNA-binding domain F3090_RS15445 PF10736 Protein of unknown function (DUF2627) F3090_RS15450 PF13974 YebO-like protein F3090_RS15455 PF13998 MgrB protein F3090_RS15460 PF13996 YobH-like protein F3090_RS15465 PF01614 Bacterial transcriptional regulator F3090_RS15465 PF09339 IclR helix-turn-helix domain F3090_RS15470 PF07690 Major Facilitator Superfamily F3090_RS15475 PF01435 Peptidase family M48 F3090_RS15480 PF11818 C-terminal domain of tail specific protease (DUF3340) F3090_RS15480 PF00595 PDZ domain F3090_RS15480 PF17804 Tail specific protease N-terminal domain F3090_RS15480 PF03572 Peptidase family S41 F3090_RS15485 PF17516 ProQ C-terminal domain F3090_RS15485 PF04352 ProQ/FINO family F3090_RS15490 PF13185 GAF domain F3090_RS15495 PF04403 Paraquat-inducible protein A F3090_RS15500 PF02470 MlaD protein F3090_RS15505 PF01189 16S rRNA methyltransferase RsmB/F F3090_RS15505 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF F3090_RS15505 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF F3090_RS15510 PF07351 Protein of unknown function (DUF1480) F3090_RS15515 PF07358 Protein of unknown function (DUF1482) F3090_RS15520 PF00149 Calcineurin-like phosphoesterase F3090_RS15525 PF04393 Protein of unknown function (DUF535) F3090_RS15535 PF10709 Protein of unknown function (DUF2511) F3090_RS15540 PF05425 Copper resistance protein D F3090_RS15545 PF04234 CopC domain F3090_RS15550 PF06440 DNA polymerase III, theta subunit F3090_RS15555 PF00929 Exonuclease F3090_RS15560 PF00326 Prolyl oligopeptidase family F3090_RS15560 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain F3090_RS15565 PF04391 Protein of unknown function (DUF533) F3090_RS15570 PF07130 YebG protein F3090_RS15575 PF02222 ATP-grasp domain F3090_RS15580 PF01081 KDPG and KHG aldolase F3090_RS15585 PF00920 Dehydratase family F3090_RS15590 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain F3090_RS15590 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain F3090_RS15600 PF01380 SIS domain F3090_RS15600 PF01418 Helix-turn-helix domain, rpiR family F3090_RS15605 PF02887 Pyruvate kinase, alpha/beta domain F3090_RS15605 PF00224 Pyruvate kinase, barrel domain F3090_RS15610 PF03279 Bacterial lipid A biosynthesis acyltransferase F3090_RS15615 PF08525 Opacity-associated protein A N-terminal motif F3090_RS15615 PF01551 Peptidase family M23 F3090_RS15615 PF01476 LysM domain F3090_RS15620 PF01297 Zinc-uptake complex component A periplasmic F3090_RS15625 PF00005 ABC transporter F3090_RS15630 PF00950 ABC 3 transport family F3090_RS15635 PF17864 RuvB AAA lid domain F3090_RS15635 PF05496 Holliday junction DNA helicase RuvB P-loop domain F3090_RS15635 PF05491 RuvB C-terminal winged helix domain F3090_RS15640 PF07499 RuvA, C-terminal domain F3090_RS15640 PF01330 RuvA N terminal domain F3090_RS15645 PF02075 Crossover junction endodeoxyribonuclease RuvC F3090_RS15650 PF01709 Transcriptional regulator F3090_RS15655 PF00293 NUDIX domain F3090_RS15660 PF01336 OB-fold nucleic acid binding domain F3090_RS15660 PF00152 tRNA synthetases class II (D, K and N) F3090_RS15660 PF02938 GAD domain F3090_RS15665 PF00857 Isochorismatase family F3090_RS15670 PF01904 Protein of unknown function DUF72 F3090_RS15675 PF01124 MAPEG family F3090_RS15680 PF13649 Methyltransferase domain F3090_RS15685 PF08003 Protein of unknown function (DUF1698) F3090_RS15695 PF01609 Transposase DDE domain F3090_RS15705 PF06185 YecM protein F3090_RS15710 PF03485 Arginyl tRNA synthetase N terminal domain F3090_RS15710 PF05746 DALR anticodon binding domain F3090_RS15710 PF00750 tRNA synthetases class I (R) F3090_RS15715 PF07470 Glycosyl Hydrolase Family 88 F3090_RS15725 PF00582 Universal stress protein family F3090_RS15730 PF00982 Glycosyltransferase family 20 F3090_RS15735 PF02358 Trehalose-phosphatase F3090_RS15740 PF02653 Branched-chain amino acid transport system / permease component F3090_RS15745 PF00005 ABC transporter F3090_RS15750 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family F3090_RS15760 PF00210 Ferritin-like domain F3090_RS15775 PF10964 Protein of unknown function (DUF2766) F3090_RS15780 PF07690 Major Facilitator Superfamily F3090_RS15795 PF00210 Ferritin-like domain F3090_RS15800 PF10678 Protein of unknown function (DUF2492) F3090_RS15805 PF03222 Tryptophan/tyrosine permease family F3090_RS15810 PF02810 SEC-C motif F3090_RS15810 PF03695 Uncharacterised protein family (UPF0149) F3090_RS15815 PF00701 Dihydrodipicolinate synthetase family F3090_RS15835 PF01066 CDP-alcohol phosphatidyltransferase F3090_RS15840 PF01541 GIY-YIG catalytic domain F3090_RS15840 PF08459 UvrC Helix-hairpin-helix N-terminal F3090_RS15840 PF02151 UvrB/uvrC motif F3090_RS15845 PF00072 Response regulator receiver domain F3090_RS15845 PF00196 Bacterial regulatory proteins, luxR family F3090_RS15850 PF10769 Protein of unknown function (DUF2594) F3090_RS15855 PF00196 Bacterial regulatory proteins, luxR family F3090_RS15855 PF03472 Autoinducer binding domain F3090_RS15860 PF00005 ABC transporter F3090_RS15865 PF00528 Binding-protein-dependent transport system inner membrane component F3090_RS15870 PF00291 Pyridoxal-phosphate dependent enzyme F3090_RS15875 PF00497 Bacterial extracellular solute-binding proteins, family 3 F3090_RS15880 PF00128 Alpha amylase, catalytic domain F3090_RS15880 PF02806 Alpha amylase, C-terminal all-beta domain F3090_RS15885 PF13987 YedD-like protein F3090_RS15890 PF00196 Bacterial regulatory proteins, luxR family F3090_RS15895 PF10781 Dextransucrase DSRB F3090_RS15900 PF10733 Protein of unknown function (DUF2525) F3090_RS15905 PF17151 Periplasmic sensor domain F3090_RS15905 PF00990 Diguanylate cyclase, GGDEF domain F3090_RS15910 PF05661 Protein of unknown function (DUF808) F3090_RS15915 PF00892 EamA-like transporter family F3090_RS15920 PF03852 DNA mismatch endonuclease Vsr F3090_RS15925 PF00145 C-5 cytosine-specific DNA methylase F3090_RS15925 PF18284 DNA methylase N-terminal domain F3090_RS15930 PF01966 HD domain F3090_RS15940 PF00267 Gram-negative porin F3090_RS15950 PF06167 Glucose-regulated metallo-peptidase M90 F3090_RS15960 PF01042 Endoribonuclease L-PSP F3090_RS15965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3090_RS15965 PF03466 LysR substrate binding domain F3090_RS15970 PF03734 L,D-transpeptidase catalytic domain F3090_RS15970 PF17969 L,D-transpeptidase C-terminal domain F3090_RS15975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3090_RS15975 PF03466 LysR substrate binding domain F3090_RS15980 PF03466 LysR substrate binding domain F3090_RS15980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3090_RS15990 PF00999 Sodium/hydrogen exchanger family F3090_RS15995 PF00440 Bacterial regulatory proteins, tetR family F3090_RS15995 PF16925 Tetracyclin repressor-like, C-terminal domain F3090_RS16000 PF00107 Zinc-binding dehydrogenase F3090_RS16000 PF08240 Alcohol dehydrogenase GroES-like domain F3090_RS16010 PF12146 Serine aminopeptidase, S33 F3090_RS16020 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus F3090_RS16020 PF01048 Phosphorylase superfamily F3090_RS16030 PF01554 MatE F3090_RS16045 PF00990 Diguanylate cyclase, GGDEF domain F3090_RS16050 PF00561 alpha/beta hydrolase fold F3090_RS16060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3090_RS16060 PF03466 LysR substrate binding domain F3090_RS16065 PF08956 Domain of unknown function (DUF1869) F3090_RS16070 PF09313 Domain of unknown function (DUF1971) F3090_RS16080 PF00990 Diguanylate cyclase, GGDEF domain F3090_RS16080 PF13188 PAS domain F3090_RS16080 PF03707 Bacterial signalling protein N terminal repeat F3090_RS16080 PF00563 EAL domain F3090_RS16090 PF07690 Major Facilitator Superfamily F3090_RS16090 PF00083 Sugar (and other) transporter F3090_RS16100 PF03466 LysR substrate binding domain F3090_RS16100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3090_RS16105 PF14552 Tautomerase enzyme F3090_RS16115 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain F3090_RS16115 PF05221 S-adenosyl-L-homocysteine hydrolase F3090_RS16120 PF02277 Phosphoribosyltransferase F3090_RS16125 PF02654 Cobalamin-5-phosphate synthase F3090_RS16130 PF04363 Protein of unknown function (DUF496) F3090_RS16135 PF04632 Fusaric acid resistance protein family F3090_RS16140 PF06445 GyrI-like small molecule binding domain F3090_RS16145 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) F3090_RS16150 PF06183 DinI-like family F3090_RS16155 PF13991 BssS protein family F3090_RS16160 PF01266 FAD dependent oxidoreductase F3090_RS16165 PF10968 Protein of unknown function (DUF2770) F3090_RS16170 PF00581 Rhodanese-like domain F3090_RS16170 PF12368 Rhodanase C-terminal F3090_RS16170 PF17773 UPF0176 acylphosphatase like domain F3090_RS16175 PF03279 Bacterial lipid A biosynthesis acyltransferase F3090_RS16180 PF07690 Major Facilitator Superfamily F3090_RS16185 PF13984 MsyB protein F3090_RS16190 PF07119 Protein of unknown function (DUF1375) F3090_RS16195 PF00535 Glycosyl transferase family 2 F3090_RS16200 PF04349 Periplasmic glucan biosynthesis protein, MdoG F3090_RS16205 PF01757 Acyltransferase family F3090_RS16210 PF13977 BetI-type transcriptional repressor, C-terminal F3090_RS16210 PF00440 Bacterial regulatory proteins, tetR family F3090_RS16215 PF01661 Macro domain F3090_RS16220 PF06496 Protein of unknown function (DUF1097) F3090_RS16225 PF02613 Nitrate reductase delta subunit F3090_RS16230 PF02811 PHP domain F3090_RS16235 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain F3090_RS16250 PF03466 LysR substrate binding domain F3090_RS16250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3090_RS16255 PF05726 Pirin C-terminal cupin domain F3090_RS16255 PF02678 Pirin F3090_RS16260 PF00857 Isochorismatase family F3090_RS16270 PF02562 PhoH-like protein F3090_RS16275 PF04261 Dyp-type peroxidase family F3090_RS16280 PF13473 Cupredoxin-like domain F3090_RS16280 PF09375 Imelysin F3090_RS16285 PF03239 Iron permease FTR1 family F3090_RS16290 PF01773 Na+ dependent nucleoside transporter N-terminus F3090_RS16290 PF07662 Na+ dependent nucleoside transporter C-terminus F3090_RS16290 PF07670 Nucleoside recognition F3090_RS16300 PF00474 Sodium:solute symporter family F3090_RS16305 PF18327 Proline utilization A proline dehydrogenase N-terminal domain F3090_RS16305 PF14850 DNA-binding domain of Proline dehydrogenase F3090_RS16305 PF01619 Proline dehydrogenase F3090_RS16305 PF00171 Aldehyde dehydrogenase family F3090_RS16315 PF00440 Bacterial regulatory proteins, tetR family F3090_RS16315 PF08362 YcdC-like protein, C-terminal region F3090_RS16320 PF00296 Luciferase-like monooxygenase F3090_RS16325 PF00857 Isochorismatase family F3090_RS16330 PF01042 Endoribonuclease L-PSP F3090_RS16335 PF00561 alpha/beta hydrolase fold F3090_RS16340 PF00881 Nitroreductase family F3090_RS16345 PF01613 Flavin reductase like domain F3090_RS16350 PF00860 Permease family F3090_RS16360 PF10685 Stress-induced bacterial acidophilic repeat motif F3090_RS16370 PF03358 NADPH-dependent FMN reductase F3090_RS16375 PF13993 YccJ-like protein F3090_RS16595 PF02899 Phage integrase, N-terminal SAM-like domain F3090_RS16595 PF00589 Phage integrase family F3090_RS16600 PF00328 Histidine phosphatase superfamily (branch 2) F3090_RS16605 PF01638 HxlR-like helix-turn-helix F3090_RS16625 PF00324 Amino acid permease F3090_RS16630 PF00120 Glutamine synthetase, catalytic domain F3090_RS16635 PF07722 Peptidase C26 F3090_RS16640 PF01381 Helix-turn-helix F3090_RS16640 PF07883 Cupin domain F3090_RS16645 PF00171 Aldehyde dehydrogenase family F3090_RS16650 PF01266 FAD dependent oxidoreductase F3090_RS16655 PF03466 LysR substrate binding domain F3090_RS16655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3090_RS16660 PF00180 Isocitrate/isopropylmalate dehydrogenase F3090_RS16665 PF02028 BCCT, betaine/carnitine/choline family transporter F3090_RS16670 PF00355 Rieske [2Fe-2S] domain F3090_RS16670 PF00848 Ring hydroxylating alpha subunit (catalytic domain) F3090_RS16675 PF00171 Aldehyde dehydrogenase family F3090_RS16680 PF00970 Oxidoreductase FAD-binding domain F3090_RS16680 PF00111 2Fe-2S iron-sulfur cluster binding domain F3090_RS16680 PF00175 Oxidoreductase NAD-binding domain F3090_RS16700 PF00239 Resolvase, N terminal domain F3090_RS16700 PF02796 Helix-turn-helix domain of resolvase F3090_RS16735 PF00959 Phage lysozyme F3090_RS16740 PF04971 Bacteriophage P21 holin S F3090_RS16770 PF14718 Soluble lytic murein transglycosylase L domain F3090_RS16770 PF01464 Transglycosylase SLT domain F3090_RS16890 PF13737 Transposase DDE domain F3090_RS16920 PF00772 DnaB-like helicase N terminal domain F3090_RS16920 PF03796 DnaB-like helicase C terminal domain F3090_RS16945 PF01381 Helix-turn-helix F3090_RS16985 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F3090_RS16990 PF01027 Inhibitor of apoptosis-promoting Bax1 F3090_RS16995 PF04358 DsrC like protein F3090_RS17000 PF00708 Acylphosphatase F3090_RS17005 PF12833 Helix-turn-helix domain F3090_RS17010 PF01161 Phosphatidylethanolamine-binding protein F3090_RS17015 PF10672 S-adenosylmethionine-dependent methyltransferase F3090_RS17015 PF17785 PUA-like domain F3090_RS17020 PF08755 Hemimethylated DNA-binding protein YccV like F3090_RS17025 PF13380 CoA binding domain F3090_RS17030 PF02142 MGS-like domain F3090_RS17035 PF13361 UvrD-like helicase C-terminal domain F3090_RS17035 PF00580 UvrD/REP helicase N-terminal domain F3090_RS17035 PF12462 DNA helicase IV / RNA helicase N terminal F3090_RS17040 PF03733 Inner membrane component domain F3090_RS17045 PF12805 FUSC-like inner membrane protein yccS F3090_RS17050 PF04994 TfoX C-terminal domain F3090_RS17050 PF04993 TfoX N-terminal domain F3090_RS17055 PF03846 Cell division inhibitor SulA F3090_RS17060 PF00691 OmpA family F3090_RS17060 PF01389 OmpA-like transmembrane domain F3090_RS17065 PF17414 MatP C-terminal ribbon-helix-helix domain F3090_RS17065 PF06303 MatP N-terminal domain F3090_RS17070 PF13654 AAA domain F3090_RS17070 PF05362 Lon protease (S16) C-terminal proteolytic domain F3090_RS17075 PF07977 FabA-like domain F3090_RS17080 PF04957 Ribosome modulation factor F3090_RS17085 PF03886 ABC-type transport auxiliary lipoprotein component F3090_RS17090 PF02470 MlaD protein F3090_RS17095 PF04403 Paraquat-inducible protein A F3090_RS17100 PF12848 ABC transporter F3090_RS17100 PF16326 ABC transporter C-terminal domain F3090_RS17100 PF00005 ABC transporter F3090_RS17105 PF02926 THUMP domain F3090_RS17105 PF10672 S-adenosylmethionine-dependent methyltransferase F3090_RS17105 PF01170 Putative RNA methylase family UPF0020 F3090_RS17110 PF03476 MOSC N-terminal beta barrel domain F3090_RS17110 PF03473 MOSC domain F3090_RS17110 PF00111 2Fe-2S iron-sulfur cluster binding domain F3090_RS17115 PF07126 Cell-division protein ZapC F3090_RS17120 PF01180 Dihydroorotate dehydrogenase F3090_RS17125 PF03358 NADPH-dependent FMN reductase F3090_RS17130 PF09084 NMT1/THI5 like F3090_RS17135 PF00296 Luciferase-like monooxygenase F3090_RS17140 PF00528 Binding-protein-dependent transport system inner membrane component F3090_RS17145 PF00005 ABC transporter F3090_RS17150 PF11940 Domain of unknown function (DUF3458) Ig-like fold F3090_RS17150 PF17432 Domain of unknown function (DUF3458_C) ARM repeats F3090_RS17150 PF01433 Peptidase family M1 domain F3090_RS17155 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain F3090_RS17155 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family F3090_RS17160 PF07687 Peptidase dimerisation domain F3090_RS17160 PF01546 Peptidase family M20/M25/M40 F3090_RS17165 PF01546 Peptidase family M20/M25/M40 F3090_RS17165 PF07687 Peptidase dimerisation domain F3090_RS17175 PF00291 Pyridoxal-phosphate dependent enzyme F3090_RS17185 PF00152 tRNA synthetases class II (D, K and N) F3090_RS17185 PF01336 OB-fold nucleic acid binding domain F3090_RS17190 PF00267 Gram-negative porin F3090_RS17195 PF00155 Aminotransferase class I and II F3090_RS17200 PF00753 Metallo-beta-lactamase superfamily F3090_RS17205 PF05951 Bacterial protein of unknown function (DUF882) F3090_RS17210 PF03734 L,D-transpeptidase catalytic domain F3090_RS17210 PF01471 Putative peptidoglycan binding domain F3090_RS17215 PF16330 MukB hinge domain F3090_RS17215 PF04310 MukB N-terminal F3090_RS17220 PF04288 MukE-like family F3090_RS17225 PF03882 MukF winged-helix domain F3090_RS17225 PF17193 MukF C-terminal domain F3090_RS17225 PF17192 MukF middle domain F3090_RS17230 PF13847 Methyltransferase domain F3090_RS17235 PF02698 DUF218 domain F3090_RS17240 PF01636 Phosphotransferase enzyme family F3090_RS17245 PF02348 Cytidylyltransferase F3090_RS17250 PF03966 Trm112p-like protein F3090_RS17255 PF06224 Winged helix DNA-binding domain F3090_RS17260 PF02606 Tetraacyldisaccharide-1-P 4'-kinase F3090_RS17265 PF00005 ABC transporter F3090_RS17265 PF00664 ABC transporter transmembrane region F3090_RS17270 PF03772 Competence protein F3090_RS17270 PF00753 Metallo-beta-lactamase superfamily F3090_RS17275 PF00216 Bacterial DNA-binding protein F3090_RS17280 PF00575 S1 RNA binding domain F3090_RS17285 PF02224 Cytidylate kinase F3090_RS17290 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) F3090_RS17295 PF00266 Aminotransferase class-V F3090_RS17300 PF04239 Protein of unknown function (DUF421) F3090_RS17305 PF18381 YcaO cyclodehydratase C-terminal domain F3090_RS17305 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding F3090_RS17310 PF01226 Formate/nitrite transporter F3090_RS17315 PF02901 Pyruvate formate lyase-like F3090_RS17315 PF01228 Glycine radical F3090_RS17320 PF04055 Radical SAM superfamily F3090_RS17325 PF07690 Major Facilitator Superfamily F3090_RS17330 PF04976 DMSO reductase anchor subunit (DmsC) F3090_RS17335 PF13247 4Fe-4S dicluster domain F3090_RS17335 PF12800 4Fe-4S binding domain F3090_RS17340 PF01568 Molydopterin dinucleotide binding domain F3090_RS17340 PF00384 Molybdopterin oxidoreductase F3090_RS17340 PF04879 Molybdopterin oxidoreductase Fe4S4 domain F3090_RS17345 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) F3090_RS17345 PF02403 Seryl-tRNA synthetase N-terminal domain F3090_RS17350 PF12002 MgsA AAA+ ATPase C terminal F3090_RS17350 PF16193 AAA C-terminal domain F3090_RS17350 PF00004 ATPase family associated with various cellular activities (AAA) F3090_RS17355 PF03548 Outer membrane lipoprotein carrier protein LolA F3090_RS17360 PF01580 FtsK/SpoIIIE family F3090_RS17360 PF09397 Ftsk gamma domain F3090_RS17360 PF17854 FtsK alpha domain F3090_RS17360 PF13491 4TM region of DNA translocase FtsK/SpoIIIE F3090_RS17365 PF01037 Lrp/AsnC ligand binding domain F3090_RS17370 PF07992 Pyridine nucleotide-disulphide oxidoreductase F3090_RS17375 PF00005 ABC transporter F3090_RS17375 PF00664 ABC transporter transmembrane region F3090_RS17380 PF00664 ABC transporter transmembrane region F3090_RS17380 PF00005 ABC transporter F3090_RS17385 PF03588 Leucyl/phenylalanyl-tRNA protein transferase F3090_RS17390 PF01176 Translation initiation factor 1A / IF-1 F3090_RS17395 PF10431 C-terminal, D2-small domain, of ClpB protein F3090_RS17395 PF02861 Clp amino terminal domain, pathogenicity island component F3090_RS17395 PF17871 AAA lid domain F3090_RS17395 PF07724 AAA domain (Cdc48 subfamily) F3090_RS17395 PF00004 ATPase family associated with various cellular activities (AAA) F3090_RS17400 PF02617 ATP-dependent Clp protease adaptor protein ClpS F3090_RS17405 PF00313 'Cold-shock' DNA-binding domain F3090_RS17410 PF00005 ABC transporter F3090_RS17410 PF02687 FtsX-like permease family F3090_RS17410 PF12704 MacB-like periplasmic core domain F3090_RS17415 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion F3090_RS17420 PF11398 Protein of unknown function (DUF2813) F3090_RS17425 PF00230 Major intrinsic protein F3090_RS17430 PF03956 Lysine exporter LysO F3090_RS17435 PF03063 Prismane/CO dehydrogenase family F3090_RS17440 PF00175 Oxidoreductase NAD-binding domain F3090_RS17440 PF00970 Oxidoreductase FAD-binding domain F3090_RS17440 PF00111 2Fe-2S iron-sulfur cluster binding domain F3090_RS17450 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain F3090_RS17450 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain F3090_RS17450 PF00205 Thiamine pyrophosphate enzyme, central domain F3090_RS17455 PF01212 Beta-eliminating lyase F3090_RS17460 PF13460 NAD(P)H-binding F3090_RS17460 PF11066 Protein of unknown function (DUF2867) F3090_RS17465 PF01370 NAD dependent epimerase/dehydratase family F3090_RS17470 PF01510 N-acetylmuramoyl-L-alanine amidase F3090_RS17475 PF00990 Diguanylate cyclase, GGDEF domain F3090_RS17475 PF00563 EAL domain F3090_RS17475 PF00360 Phytochrome region F3090_RS17475 PF01590 GAF domain F3090_RS17480 PF12883 Protein of unknown function (DUF3828) F3090_RS17485 PF00005 ABC transporter F3090_RS17490 PF00497 Bacterial extracellular solute-binding proteins, family 3 F3090_RS17495 PF00528 Binding-protein-dependent transport system inner membrane component F3090_RS17500 PF00528 Binding-protein-dependent transport system inner membrane component F3090_RS17505 PF00497 Bacterial extracellular solute-binding proteins, family 3 F3090_RS17510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3090_RS17510 PF16736 Single Cache-like F3090_RS17510 PF00989 PAS fold F3090_RS17510 PF00512 His Kinase A (phospho-acceptor) domain F3090_RS17515 PF00486 Transcriptional regulatory protein, C terminal F3090_RS17515 PF00072 Response regulator receiver domain F3090_RS17520 PF05958 tRNA (Uracil-5-)-methyltransferase F3090_RS17525 PF10767 Protein of unknown function (DUF2593) F3090_RS17530 PF00528 Binding-protein-dependent transport system inner membrane component F3090_RS17535 PF00528 Binding-protein-dependent transport system inner membrane component F3090_RS17540 PF08402 TOBE domain F3090_RS17540 PF00005 ABC transporter F3090_RS17545 PF13416 Bacterial extracellular solute-binding protein F3090_RS17550 PF10722 Putative bacterial sensory transduction regulator F3090_RS17555 PF18030 RimK PreATP-grasp domain F3090_RS17555 PF08443 RimK-like ATP-grasp domain F3090_RS17560 PF00881 Nitroreductase family F3090_RS17565 PF07214 Protein of unknown function (DUF1418) F3090_RS17570 PF00462 Glutaredoxin F3090_RS17575 PF11045 Putative inner membrane protein of Enterobacteriaceae F3090_RS17580 PF06826 Predicted Permease Membrane Region F3090_RS17580 PF02080 TrkA-C domain F3090_RS17585 PF00440 Bacterial regulatory proteins, tetR family F3090_RS17590 PF07690 Major Facilitator Superfamily F3090_RS17600 PF07690 Major Facilitator Superfamily F3090_RS17605 PF01569 PAP2 superfamily F3090_RS17610 PF00455 DeoR C terminal sensor domain F3090_RS17610 PF08220 DeoR-like helix-turn-helix domain F3090_RS17615 PF00768 D-alanyl-D-alanine carboxypeptidase F3090_RS17615 PF07943 Penicillin-binding protein 5, C-terminal domain F3090_RS17625 PF13417 Glutathione S-transferase, N-terminal domain F3090_RS17625 PF00043 Glutathione S-transferase, C-terminal domain F3090_RS17630 PF07995 Glucose / Sorbosone dehydrogenase F3090_RS17635 PF10799 Biofilm formation protein (YliH/bssR) F3090_RS17640 PF01306 LacY proton/sugar symporter F3090_RS17645 PF00919 Uncharacterized protein family UPF0004 F3090_RS17645 PF18693 TRAM domain F3090_RS17645 PF04055 Radical SAM superfamily F3090_RS17650 PF00528 Binding-protein-dependent transport system inner membrane component F3090_RS17650 PF12911 N-terminal TM domain of oligopeptide transport permease C F3090_RS17655 PF00528 Binding-protein-dependent transport system inner membrane component F3090_RS17660 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F3090_RS17665 PF00005 ABC transporter F3090_RS17665 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F3090_RS17670 PF01112 Asparaginase F3090_RS17675 PF00994 Probable molybdopterin binding domain F3090_RS17675 PF03454 MoeA C-terminal region (domain IV) F3090_RS17675 PF03453 MoeA N-terminal region (domain I and II) F3090_RS17680 PF00899 ThiF family F3090_RS17685 PF04055 Radical SAM superfamily F3090_RS17690 PF02901 Pyruvate formate lyase-like F3090_RS17690 PF01228 Glycine radical F3090_RS17700 PF07350 Protein of unknown function (DUF1479) F3090_RS17705 PF00356 Bacterial regulatory proteins, lacI family F3090_RS17710 PF07690 Major Facilitator Superfamily F3090_RS17715 PF01055 Glycosyl hydrolases family 31 F3090_RS17715 PF17137 Domain of unknown function (DUF5110) F3090_RS17715 PF13802 Galactose mutarotase-like F3090_RS17715 PF16338 Domain of unknown function (DUF4968) F3090_RS17720 PF00005 ABC transporter F3090_RS17720 PF12848 ABC transporter F3090_RS17725 PF13350 Tyrosine phosphatase family F3090_RS17730 PF03734 L,D-transpeptidase catalytic domain F3090_RS17730 PF17969 L,D-transpeptidase C-terminal domain F3090_RS17735 PF07702 UTRA domain F3090_RS17735 PF00392 Bacterial regulatory proteins, gntR family F3090_RS17740 PF00232 Glycosyl hydrolase family 1 F3090_RS17745 PF03600 Citrate transporter F3090_RS17750 PF02742 Iron dependent repressor, metal binding and dimerisation domain F3090_RS17750 PF01325 Iron dependent repressor, N-terminal DNA binding domain F3090_RS17760 PF00884 Sulfatase F3090_RS17765 PF13505 Outer membrane protein beta-barrel domain F3090_RS17770 PF00892 EamA-like transporter family F3090_RS17775 PF00210 Ferritin-like domain F3090_RS17780 PF00497 Bacterial extracellular solute-binding proteins, family 3 F3090_RS17785 PF00528 Binding-protein-dependent transport system inner membrane component F3090_RS17790 PF00005 ABC transporter F3090_RS17795 PF00924 Mechanosensitive ion channel F3090_RS17800 PF05971 RNA methyltransferase F3090_RS17805 PF01613 Flavin reductase like domain F3090_RS17815 PF01258 Prokaryotic dksA/traR C4-type zinc finger F3090_RS17820 PF07338 Protein of unknown function (DUF1471) F3090_RS17825 PF02885 Glycosyl transferase family, helical bundle domain F3090_RS17830 PF06733 DEAD_2 F3090_RS17830 PF13307 Helicase C-terminal domain F3090_RS17830 PF00270 DEAD/DEAH box helicase F3090_RS17835 PF00271 Helicase conserved C-terminal domain F3090_RS17835 PF00270 DEAD/DEAH box helicase F3090_RS17840 PF02779 Transketolase, pyrimidine binding domain F3090_RS17840 PF02780 Transketolase, C-terminal domain F3090_RS17845 PF00456 Transketolase, thiamine diphosphate binding domain F3090_RS17855 PF07690 Major Facilitator Superfamily F3090_RS17865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3090_RS17865 PF03466 LysR substrate binding domain F3090_RS17870 PF09209 Tetracyclin repressor-like, C-terminal domain F3090_RS17870 PF00440 Bacterial regulatory proteins, tetR family F3090_RS17875 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion F3090_RS17880 PF00005 ABC transporter F3090_RS17895 PF11076 Putative inner membrane protein YbhQ F3090_RS17900 PF03372 Endonuclease/Exonuclease/phosphatase family F3090_RS17905 PF13091 PLD-like domain F3090_RS17910 PF03706 Lysylphosphatidylglycerol synthase TM region F3090_RS17915 PF01027 Inhibitor of apoptosis-promoting Bax1 F3090_RS17920 PF02391 MoaE protein F3090_RS17925 PF02597 ThiS family F3090_RS17930 PF01967 MoaC family F3090_RS17935 PF00994 Probable molybdopterin binding domain F3090_RS17940 PF06463 Molybdenum Cofactor Synthesis C F3090_RS17940 PF04055 Radical SAM superfamily F3090_RS17945 PF01933 Uncharacterised protein family UPF0052 F3090_RS17950 PF00884 Sulfatase F3090_RS17950 PF08019 Phosphoethanolamine transferase EptA/EptB F3090_RS17955 PF00486 Transcriptional regulatory protein, C terminal F3090_RS17955 PF00072 Response regulator receiver domain F3090_RS17960 PF00512 His Kinase A (phospho-acceptor) domain F3090_RS17960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3090_RS17965 PF17757 UvrB interaction domain F3090_RS17965 PF00271 Helicase conserved C-terminal domain F3090_RS17965 PF12344 Ultra-violet resistance protein B F3090_RS17965 PF04851 Type III restriction enzyme, res subunit F3090_RS17965 PF02151 UvrB/uvrC motif F3090_RS17975 PF00005 ABC transporter F3090_RS17985 PF08241 Methyltransferase domain F3090_RS17990 PF00155 Aminotransferase class I and II F3090_RS17995 PF06968 Biotin and Thiamin Synthesis associated domain F3090_RS17995 PF04055 Radical SAM superfamily F3090_RS18000 PF00202 Aminotransferase class-III F3090_RS18005 PF01161 Phosphatidylethanolamine-binding protein F3090_RS18010 PF00324 Amino acid permease F3090_RS18015 PF00221 Aromatic amino acid lyase F3090_RS18020 PF17391 Urocanase N-terminal domain F3090_RS18020 PF01175 Urocanase Rossmann-like domain F3090_RS18020 PF17392 Urocanase C-terminal domain F3090_RS18030 PF07702 UTRA domain F3090_RS18030 PF00392 Bacterial regulatory proteins, gntR family F3090_RS18035 PF00491 Arginase family F3090_RS18040 PF01979 Amidohydrolase family F3090_RS18045 PF01095 Pectinesterase F3090_RS18050 PF00689 Cation transporting ATPase, C-terminus F3090_RS18050 PF00690 Cation transporter/ATPase, N-terminus F3090_RS18055 PF00582 Universal stress protein family F3090_RS18060 PF13533 Biotin-lipoyl like F3090_RS18065 PF00873 AcrB/AcrD/AcrF family F3090_RS18095 PF13411 MerR HTH family regulatory protein F3090_RS18100 PF04940 Sensors of blue-light using FAD F3090_RS18100 PF00563 EAL domain F3090_RS18105 PF10798 Biofilm development protein YmgB/AriR F3090_RS18115 PF10798 Biofilm development protein YmgB/AriR F3090_RS18120 PF10282 Lactonase, 7-bladed beta-propeller F3090_RS18130 PF03459 TOBE domain F3090_RS18130 PF00005 ABC transporter F3090_RS18135 PF00528 Binding-protein-dependent transport system inner membrane component F3090_RS18145 PF10766 Multidrug efflux pump-associated protein AcrZ F3090_RS18150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3090_RS18150 PF03459 TOBE domain F3090_RS18155 PF00005 ABC transporter F3090_RS18160 PF16363 GDP-mannose 4,6 dehydratase F3090_RS18165 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain F3090_RS18165 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain F3090_RS18170 PF10509 Galactokinase galactose-binding signature F3090_RS18170 PF08544 GHMP kinases C terminal F3090_RS18170 PF00288 GHMP kinases N terminal domain F3090_RS18175 PF01263 Aldose 1-epimerase F3090_RS18180 PF00300 Histidine phosphatase superfamily (branch 1) F3090_RS18185 PF00793 DAHP synthetase I family F3090_RS18190 PF13985 YbgS-like protein F3090_RS18195 PF01545 Cation efflux family F3090_RS18200 PF04973 Nicotinamide mononucleotide transporter F3090_RS18205 PF02445 Quinolinate synthetase A protein F3090_RS18230 PF16331 TolA binding protein trimerisation F3090_RS18230 PF13174 Tetratricopeptide repeat F3090_RS18235 PF00691 OmpA family F3090_RS18240 PF04052 TolB amino-terminal domain F3090_RS18240 PF07676 WD40-like Beta Propeller Repeat F3090_RS18245 PF06519 TolA C-terminal F3090_RS18250 PF02472 Biopolymer transport protein ExbD/TolR F3090_RS18255 PF01618 MotA/TolQ/ExbB proton channel family F3090_RS18260 PF03061 Thioesterase superfamily F3090_RS18265 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) F3090_RS18270 PF08173 Membrane bound YbgT-like protein F3090_RS18275 PF02322 Cytochrome bd terminal oxidase subunit II F3090_RS18280 PF01654 Cytochrome bd terminal oxidase subunit I F3090_RS18285 PF02629 CoA binding domain F3090_RS18285 PF00549 CoA-ligase F3090_RS18290 PF08442 ATP-grasp domain F3090_RS18290 PF00549 CoA-ligase F3090_RS18295 PF02817 e3 binding domain F3090_RS18295 PF00364 Biotin-requiring enzyme F3090_RS18295 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) F3090_RS18300 PF02779 Transketolase, pyrimidine binding domain F3090_RS18300 PF16870 2-oxoglutarate dehydrogenase C-terminal F3090_RS18300 PF16078 2-oxoglutarate dehydrogenase N-terminus F3090_RS18300 PF00676 Dehydrogenase E1 component F3090_RS18305 PF13085 2Fe-2S iron-sulfur cluster binding domain F3090_RS18310 PF02910 Fumarate reductase flavoprotein C-term F3090_RS18310 PF00890 FAD binding domain F3090_RS18315 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit F3090_RS18320 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit F3090_RS18325 PF00285 Citrate synthase, C-terminal domain F3090_RS18330 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain F3090_RS18330 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain F3090_RS18330 PF06827 Zinc finger found in FPG and IleRS F3090_RS18335 PF01470 Pyroglutamyl peptidase F3090_RS18350 PF03746 LamB/YcsF family F3090_RS18355 PF02626 Carboxyltransferase domain, subdomain A and B F3090_RS18360 PF02682 Carboxyltransferase domain, subdomain C and D F3090_RS18365 PF01784 NIF3 (NGG1p interacting factor 3) F3090_RS18370 PF00854 POT family F3090_RS18375 PF03441 FAD binding domain of DNA photolyase F3090_RS18375 PF00875 DNA photolyase F3090_RS18380 PF10725 Protein of unknown function (DUF2517) F3090_RS18385 PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) F3090_RS18390 PF03814 Potassium-transporting ATPase A subunit F3090_RS18400 PF02669 K+-transporting ATPase, c chain F3090_RS18405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3090_RS18405 PF00512 His Kinase A (phospho-acceptor) domain F3090_RS18405 PF13493 Domain of unknown function (DUF4118) F3090_RS18405 PF02702 Osmosensitive K+ channel His kinase sensor domain F3090_RS18405 PF13492 GAF domain F3090_RS18410 PF00072 Response regulator receiver domain F3090_RS18410 PF00486 Transcriptional regulatory protein, C terminal F3090_RS18420 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II F3090_RS18420 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III F3090_RS18420 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain F3090_RS18420 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I F3090_RS18425 PF03925 SeqA protein C-terminal domain F3090_RS18425 PF17206 SeqA protein N-terminal domain F3090_RS18430 PF12697 Alpha/beta hydrolase family F3090_RS18435 PF01402 Ribbon-helix-helix protein, copG family F3090_RS18440 PF00258 Flavodoxin F3090_RS18445 PF01475 Ferric uptake regulator family F3090_RS18455 PF13982 YbfN-like lipoprotein F3090_RS18460 PF03573 outer membrane porin, OprD family F3090_RS18470 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain F3090_RS18470 PF00749 tRNA synthetases class I (E and Q), catalytic domain F3090_RS18475 PF02378 Phosphotransferase system, EIIC F3090_RS18475 PF00367 phosphotransferase system, EIIB F3090_RS18475 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 F3090_RS18480 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase F3090_RS18485 PF01979 Amidohydrolase family F3090_RS18490 PF01047 MarR family F3090_RS18490 PF00480 ROK family F3090_RS18495 PF13344 Haloacid dehalogenase-like hydrolase F3090_RS18500 PF13537 Glutamine amidotransferase domain F3090_RS18500 PF00733 Asparagine synthase F3090_RS18540 PF01494 FAD binding domain F3090_RS18545 PF00919 Uncharacterized protein family UPF0004 F3090_RS18545 PF01938 TRAM domain F3090_RS18545 PF04055 Radical SAM superfamily F3090_RS18550 PF02562 PhoH-like protein F3090_RS18555 PF02130 Uncharacterized protein family UPF0054 F3090_RS18560 PF03471 Transporter associated domain F3090_RS18560 PF00571 CBS domain F3090_RS18565 PF00795 Carbon-nitrogen hydrolase F3090_RS18570 PF00497 Bacterial extracellular solute-binding proteins, family 3 F3090_RS18575 PF00528 Binding-protein-dependent transport system inner membrane component F3090_RS18580 PF00528 Binding-protein-dependent transport system inner membrane component F3090_RS18585 PF00005 ABC transporter F3090_RS18590 PF08479 POTRA domain, ShlB-type F3090_RS18590 PF17287 POTRA domain F3090_RS18590 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB F3090_RS18595 PF05594 Haemagluttinin repeat F3090_RS18595 PF13332 Hemagglutinin repeat F3090_RS18595 PF14436 Bacterial EndoU nuclease F3090_RS18595 PF04829 Pre-toxin domain with VENN motif F3090_RS18595 PF05860 haemagglutination activity domain F3090_RS18600 PF07295 Zinc-ribbon containing domain F3090_RS18605 PF00133 tRNA synthetases class I (I, L, M and V) F3090_RS18605 PF13603 Leucyl-tRNA synthetase, Domain 2 F3090_RS18605 PF08264 Anticodon-binding domain of tRNA F3090_RS18610 PF04390 Lipopolysaccharide-assembly F3090_RS18615 PF06144 DNA polymerase III, delta subunit F3090_RS18615 PF14840 Processivity clamp loader gamma complex DNA pol III C-term F3090_RS18620 PF01467 Cytidylyltransferase-like F3090_RS18625 PF00300 Histidine phosphatase superfamily (branch 1) F3090_RS18635 PF02590 Predicted SPOUT methyltransferase F3090_RS18640 PF00905 Penicillin binding protein transpeptidase domain F3090_RS18640 PF03717 Penicillin-binding Protein dimerisation domain F3090_RS18645 PF01098 Cell cycle protein F3090_RS18650 PF03330 Lytic transglycolase F3090_RS18650 PF05036 Sporulation related domain F3090_RS18655 PF00768 D-alanyl-D-alanine carboxypeptidase F3090_RS18655 PF07943 Penicillin-binding protein 5, C-terminal domain F3090_RS18660 PF04359 Protein of unknown function (DUF493) F3090_RS18665 PF03099 Biotin/lipoate A/B protein ligase family F3090_RS18670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3090_RS18670 PF03466 LysR substrate binding domain F3090_RS18675 PF04055 Radical SAM superfamily F3090_RS18675 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family F3090_RS18680 PF02416 mttA/Hcf106 family F3090_RS18685 PF00795 Carbon-nitrogen hydrolase F3090_RS18690 PF02537 CrcB-like protein, Camphor Resistance (CrcB) F3090_RS18695 PF00313 'Cold-shock' DNA-binding domain F3090_RS18700 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP F3090_RS18705 PF03606 C4-dicarboxylate anaerobic carrier F3090_RS18710 PF00445 Ribonuclease T2 family F3090_RS18715 PF01272 Transcription elongation factor, GreA/GreB, C-term F3090_RS18715 PF14760 Rnk N-terminus F3090_RS18720 PF00582 Universal stress protein family F3090_RS18725 PF07992 Pyridine nucleotide-disulphide oxidoreductase F3090_RS18725 PF13192 Thioredoxin domain F3090_RS18730 PF00578 AhpC/TSA family F3090_RS18730 PF10417 C-terminal domain of 1-Cys peroxiredoxin F3090_RS18735 PF13098 Thioredoxin-like domain F3090_RS18740 PF03466 LysR substrate binding domain F3090_RS18740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3090_RS18745 PF11922 Domain of unknown function (DUF3440) F3090_RS18745 PF01507 Phosphoadenosine phosphosulfate reductase family F3090_RS18750 PF02195 ParB-like nuclease domain F3090_RS18755 PF00155 Aminotransferase class I and II F3090_RS18765 PF03079 ARD/ARD' family F3090_RS18770 PF01568 Molydopterin dinucleotide binding domain F3090_RS18770 PF00384 Molybdopterin oxidoreductase F3090_RS18780 PF00005 ABC transporter F3090_RS18785 PF02653 Branched-chain amino acid transport system / permease component F3090_RS18790 PF02653 Branched-chain amino acid transport system / permease component F3090_RS18800 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain F3090_RS18800 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain F3090_RS18805 PF00370 FGGY family of carbohydrate kinases, N-terminal domain F3090_RS18805 PF02782 FGGY family of carbohydrate kinases, C-terminal domain F3090_RS18810 PF00596 Class II Aldolase and Adducin N-terminal domain F3090_RS18815 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin F3090_RS18825 PF07969 Amidohydrolase family F3090_RS18830 PF00356 Bacterial regulatory proteins, lacI family F3090_RS18835 PF00459 Inositol monophosphatase family F3090_RS18840 PF07690 Major Facilitator Superfamily F3090_RS18845 PF00328 Histidine phosphatase superfamily (branch 2) F3090_RS18850 PF01008 Initiation factor 2 subunit family F3090_RS18855 PF01636 Phosphotransferase enzyme family F3090_RS18870 PF02653 Branched-chain amino acid transport system / permease component F3090_RS18875 PF00005 ABC transporter F3090_RS18880 PF00465 Iron-containing alcohol dehydrogenase F3090_RS18900 PF04328 Selenoprotein, putative F3090_RS18905 PF13722 5TM C-terminal transporter carbon starvation CstA F3090_RS18905 PF02554 Carbon starvation protein CstA F3090_RS18910 PF03061 Thioesterase superfamily F3090_RS18920 PF00857 Isochorismatase family F3090_RS18920 PF00550 Phosphopantetheine attachment site F3090_RS18925 PF13193 AMP-binding enzyme C-terminal domain F3090_RS18925 PF00501 AMP-binding enzyme F3090_RS18930 PF00425 chorismate binding enzyme F3090_RS18935 PF01497 Periplasmic binding protein F3090_RS18940 PF05977 Transmembrane secretion effector F3090_RS18945 PF01032 FecCD transport family F3090_RS18950 PF01032 FecCD transport family F3090_RS18955 PF00005 ABC transporter F3090_RS18960 PF00550 Phosphopantetheine attachment site F3090_RS18960 PF13193 AMP-binding enzyme C-terminal domain F3090_RS18960 PF00668 Condensation domain F3090_RS18960 PF00501 AMP-binding enzyme F3090_RS18960 PF00975 Thioesterase domain F3090_RS18965 PF03621 MbtH-like protein F3090_RS18970 PF11806 Domain of unknown function (DUF3327) F3090_RS18970 PF00756 Putative esterase F3090_RS18975 PF00593 TonB dependent receptor F3090_RS18975 PF07715 TonB-dependent Receptor Plug Domain F3090_RS18980 PF01648 4'-phosphopantetheinyl transferase superfamily F3090_RS18980 PF17837 4'-phosphopantetheinyl transferase N-terminal domain F3090_RS18985 PF02780 Transketolase, C-terminal domain F3090_RS18985 PF02779 Transketolase, pyrimidine binding domain F3090_RS18990 PF00456 Transketolase, thiamine diphosphate binding domain F3090_RS18995 PF04198 Putative sugar-binding domain F3090_RS18995 PF00325 Bacterial regulatory proteins, crp family F3090_RS19000 PF02782 FGGY family of carbohydrate kinases, C-terminal domain F3090_RS19000 PF00370 FGGY family of carbohydrate kinases, N-terminal domain F3090_RS19005 PF13407 Periplasmic binding protein domain F3090_RS19015 PF00005 ABC transporter F3090_RS19020 PF02653 Branched-chain amino acid transport system / permease component F3090_RS19040 PF03466 LysR substrate binding domain F3090_RS19040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3090_RS19045 PF00924 Mechanosensitive ion channel F3090_RS19055 PF02028 BCCT, betaine/carnitine/choline family transporter F3090_RS19060 PF13977 BetI-type transcriptional repressor, C-terminal F3090_RS19060 PF00440 Bacterial regulatory proteins, tetR family F3090_RS19065 PF00171 Aldehyde dehydrogenase family F3090_RS19070 PF00732 GMC oxidoreductase F3090_RS19070 PF05199 GMC oxidoreductase F3090_RS19080 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F3090_RS19085 PF00528 Binding-protein-dependent transport system inner membrane component F3090_RS19090 PF12911 N-terminal TM domain of oligopeptide transport permease C F3090_RS19090 PF00528 Binding-protein-dependent transport system inner membrane component F3090_RS19095 PF00005 ABC transporter F3090_RS19095 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F3090_RS19100 PF00005 ABC transporter F3090_RS19100 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F3090_RS19105 PF00202 Aminotransferase class-III F3090_RS19110 PF00106 short chain dehydrogenase F3090_RS19115 PF00005 ABC transporter F3090_RS19120 PF00528 Binding-protein-dependent transport system inner membrane component F3090_RS19125 PF00528 Binding-protein-dependent transport system inner membrane component F3090_RS19130 PF01464 Transglycosylase SLT domain F3090_RS19130 PF00497 Bacterial extracellular solute-binding proteins, family 3 F3090_RS19135 PF00155 Aminotransferase class I and II F3090_RS19135 PF00392 Bacterial regulatory proteins, gntR family F3090_RS19140 PF00155 Aminotransferase class I and II F3090_RS19145 PF00892 EamA-like transporter family F3090_RS19150 PF07687 Peptidase dimerisation domain F3090_RS19150 PF01546 Peptidase family M20/M25/M40 F3090_RS19155 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F3090_RS19155 PF00005 ABC transporter F3090_RS19160 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F3090_RS19160 PF00005 ABC transporter F3090_RS19165 PF00528 Binding-protein-dependent transport system inner membrane component F3090_RS19165 PF12911 N-terminal TM domain of oligopeptide transport permease C F3090_RS19170 PF00528 Binding-protein-dependent transport system inner membrane component F3090_RS19175 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F3090_RS19180 PF04107 Glutamate-cysteine ligase family 2(GCS2) F3090_RS19185 PF09992 Phosphodiester glycosidase F3090_RS19190 PF00873 AcrB/AcrD/AcrF family F3090_RS19195 PF13533 Biotin-lipoyl like F3090_RS19200 PF00689 Cation transporting ATPase, C-terminus F3090_RS19200 PF00690 Cation transporter/ATPase, N-terminus F3090_RS19205 PF06643 Protein of unknown function (DUF1158) F3090_RS19210 PF12833 Helix-turn-helix domain F3090_RS19215 PF12706 Beta-lactamase superfamily domain F3090_RS19220 PF00440 Bacterial regulatory proteins, tetR family F3090_RS19225 PF04237 YjbR F3090_RS19230 PF00881 Nitroreductase family F3090_RS19255 PF07690 Major Facilitator Superfamily F3090_RS19260 PF00924 Mechanosensitive ion channel F3090_RS19265 PF00356 Bacterial regulatory proteins, lacI family F3090_RS19275 PF02894 Oxidoreductase family, C-terminal alpha/beta domain F3090_RS19275 PF01408 Oxidoreductase family, NAD-binding Rossmann fold F3090_RS19285 PF03825 Nucleoside H+ symporter F3090_RS19290 PF00324 Amino acid permease F3090_RS19295 PF07715 TonB-dependent Receptor Plug Domain F3090_RS19295 PF00593 TonB dependent receptor F3090_RS19305 PF00171 Aldehyde dehydrogenase family F3090_RS19310 PF01266 FAD dependent oxidoreductase F3090_RS19320 PF13520 Amino acid permease F3090_RS19330 PF00850 Histone deacetylase domain F3090_RS19340 PF00196 Bacterial regulatory proteins, luxR family F3090_RS19345 PF04055 Radical SAM superfamily F3090_RS19350 PF00884 Sulfatase F3090_RS19360 PF17409 MoaF C-terminal domain F3090_RS19360 PF10703 MoaF N-terminal domain F3090_RS19365 PF00248 Aldo/keto reductase family F3090_RS19370 PF00497 Bacterial extracellular solute-binding proteins, family 3 F3090_RS19375 PF01546 Peptidase family M20/M25/M40 F3090_RS19375 PF07687 Peptidase dimerisation domain F3090_RS19405 PF01032 FecCD transport family F3090_RS19410 PF00005 ABC transporter F3090_RS19415 PF00529 HlyD membrane-fusion protein of T1SS F3090_RS19415 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion F3090_RS19420 PF11742 Protein of unknown function (DUF3302) F3090_RS19430 PF00294 pfkB family carbohydrate kinase F3090_RS19435 PF02264 LamB porin F3090_RS19435 PF11471 Maltoporin periplasmic N-terminal extension F3090_RS19440 PF00367 phosphotransferase system, EIIB F3090_RS19440 PF02378 Phosphotransferase system, EIIC F3090_RS19445 PF00251 Glycosyl hydrolases family 32 N-terminal domain F3090_RS19445 PF08244 Glycosyl hydrolases family 32 C terminal F3090_RS19450 PF00356 Bacterial regulatory proteins, lacI family F3090_RS19450 PF13407 Periplasmic binding protein domain F3090_RS19460 PF02653 Branched-chain amino acid transport system / permease component F3090_RS19465 PF00005 ABC transporter F3090_RS19470 PF13407 Periplasmic binding protein domain F3090_RS19475 PF00356 Bacterial regulatory proteins, lacI family F3090_RS19480 PF01408 Oxidoreductase family, NAD-binding Rossmann fold F3090_RS19480 PF02894 Oxidoreductase family, C-terminal alpha/beta domain F3090_RS19485 PF01408 Oxidoreductase family, NAD-binding Rossmann fold F3090_RS19485 PF02894 Oxidoreductase family, C-terminal alpha/beta domain F3090_RS19490 PF01408 Oxidoreductase family, NAD-binding Rossmann fold F3090_RS19490 PF02894 Oxidoreductase family, C-terminal alpha/beta domain F3090_RS19495 PF01261 Xylose isomerase-like TIM barrel F3090_RS19505 PF01336 OB-fold nucleic acid binding domain F3090_RS19505 PF00152 tRNA synthetases class II (D, K and N) F3090_RS19510 PF00854 POT family F3090_RS19515 PF01276 Orn/Lys/Arg decarboxylase, major domain F3090_RS19515 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain F3090_RS19515 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain F3090_RS19520 PF13520 Amino acid permease F3090_RS19525 PF00486 Transcriptional regulatory protein, C terminal F3090_RS19525 PF18500 CadC C-terminal domain 1 F3090_RS19535 PF03279 Bacterial lipid A biosynthesis acyltransferase F3090_RS19550 PF00577 Outer membrane usher protein F3090_RS19550 PF13954 PapC N-terminal domain F3090_RS19550 PF13953 PapC C-terminal domain F3090_RS19555 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain F3090_RS19555 PF02753 Pili assembly chaperone PapD, C-terminal domain F3090_RS19560 PF16970 Type-1 fimbrial protein, A F3090_RS19575 PF00285 Citrate synthase, C-terminal domain F3090_RS19590 PF00576 HIUase/Transthyretin family F3090_RS19600 PF00717 Peptidase S24-like F3090_RS19740 PF10668 Phage terminase small subunit F3090_RS19740 PF03592 Terminase small subunit F3090_RS19790 PF00149 Calcineurin-like phosphoesterase F3090_RS19875 PF01381 Helix-turn-helix F3090_RS19875 PF00717 Peptidase S24-like F3090_RS19965 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain F3090_RS19965 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain F3090_RS19975 PF01406 tRNA synthetases class I (C) catalytic domain F3090_RS19975 PF09190 DALR domain F3090_RS19980 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD F3090_RS19985 PF00149 Calcineurin-like phosphoesterase F3090_RS19995 PF00731 AIR carboxylase F3090_RS20000 PF02222 ATP-grasp domain F3090_RS20000 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain F3090_RS20010 PF00267 Gram-negative porin F3090_RS20025 PF00005 ABC transporter F3090_RS20030 PF13472 GDSL-like Lipase/Acylhydrolase family F3090_RS20035 PF00106 short chain dehydrogenase F3090_RS20040 PF00085 Thioredoxin F3090_RS20045 PF03649 Uncharacterised protein family (UPF0014) F3090_RS20050 PF00005 ABC transporter F3090_RS20055 PF16200 C-terminal region of band_7 F3090_RS20055 PF01145 SPFH domain / Band 7 family F3090_RS20060 PF01957 NfeD-like C-terminal, partner-binding F3090_RS20065 PF13411 MerR HTH family regulatory protein F3090_RS20070 PF00403 Heavy-metal-associated domain F3090_RS20075 PF01963 TraB family F3090_RS20080 PF04073 Aminoacyl-tRNA editing domain F3090_RS20085 PF00149 Calcineurin-like phosphoesterase F3090_RS20085 PF02872 5'-nucleotidase, C-terminal domain F3090_RS20090 PF07690 Major Facilitator Superfamily F3090_RS20095 PF00999 Sodium/hydrogen exchanger family F3090_RS20095 PF02254 TrkA-N domain F3090_RS20100 PF00294 pfkB family carbohydrate kinase F3090_RS20105 PF00762 Ferrochelatase F3090_RS20110 PF05191 Adenylate kinase, active site lid F3090_RS20115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3090_RS20115 PF00183 Hsp90 protein F3090_RS20120 PF13662 Toprim domain F3090_RS20120 PF02132 RecR protein F3090_RS20125 PF02575 YbaB/EbfC DNA-binding family F3090_RS20130 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding F3090_RS20130 PF12169 DNA polymerase III subunits gamma and tau domain III F3090_RS20130 PF12170 DNA polymerase III tau subunit V interacting with alpha F3090_RS20135 PF00156 Phosphoribosyl transferase domain F3090_RS20140 PF04304 Protein of unknown function (DUF454) F3090_RS20145 PF07445 Primosomal replication protein priC F3090_RS20150 PF10689 Protein of unknown function (DUF2496) F3090_RS20155 PF04754 Putative transposase, YhgA-like F3090_RS20160 PF12794 Mechanosensitive ion channel inner membrane domain 1 F3090_RS20160 PF12795 Mechanosensitive ion channel porin domain F3090_RS20160 PF00924 Mechanosensitive ion channel F3090_RS20180 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion F3090_RS20180 PF00529 HlyD membrane-fusion protein of T1SS F3090_RS20185 PF00873 AcrB/AcrD/AcrF family F3090_RS20190 PF10757 Biofilm formation regulator YbaJ F3090_RS20195 PF05321 Haemolysin expression modulating protein F3090_RS20200 PF14602 Hexapeptide repeat of succinyl-transferase F3090_RS20200 PF12464 Maltose acetyltransferase F3090_RS20210 PF10777 Inner membrane protein YlaC F3090_RS20215 PF00392 Bacterial regulatory proteins, gntR family F3090_RS20215 PF00155 Aminotransferase class I and II F3090_RS20225 PF00444 Ribosomal protein L36 F3090_RS20230 PF01197 Ribosomal protein L31 F3090_RS20235 PF00356 Bacterial regulatory proteins, lacI family F3090_RS20240 PF02264 LamB porin F3090_RS20245 PF02378 Phosphotransferase system, EIIC F3090_RS20245 PF00367 phosphotransferase system, EIIB F3090_RS20250 PF02449 Beta-galactosidase F3090_RS20250 PF08533 Beta-galactosidase C-terminal domain F3090_RS20250 PF08532 Beta-galactosidase trimerisation domain F3090_RS20255 PF07745 Glycosyl hydrolase family 53 F3090_RS20260 PF00528 Binding-protein-dependent transport system inner membrane component F3090_RS20265 PF00528 Binding-protein-dependent transport system inner membrane component F3090_RS20270 PF13416 Bacterial extracellular solute-binding protein F3090_RS20275 PF17912 MalK OB fold domain F3090_RS20275 PF00005 ABC transporter F3090_RS20280 PF00563 EAL domain F3090_RS20280 PF12792 CSS motif domain associated with EAL F3090_RS20285 PF02583 Metal-sensitive transcriptional repressor F3090_RS20290 PF03824 High-affinity nickel-transport protein F3090_RS20325 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain F3090_RS20330 PF09619 Type III secretion system lipoprotein chaperone (YscW) F3090_RS20340 PF00909 Ammonium Transporter Family F3090_RS20345 PF00543 Nitrogen regulatory protein P-II F3090_RS20350 PF00664 ABC transporter transmembrane region F3090_RS20350 PF00005 ABC transporter F3090_RS20355 PF00664 ABC transporter transmembrane region F3090_RS20355 PF00005 ABC transporter F3090_RS20360 PF01037 Lrp/AsnC ligand binding domain F3090_RS20360 PF13404 AsnC-type helix-turn-helix domain F3090_RS20365 PF00291 Pyridoxal-phosphate dependent enzyme F3090_RS20375 PF12793 Sugar transport-related sRNA regulator N-term F3090_RS20375 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F3090_RS20380 PF06508 Queuosine biosynthesis protein QueC F3090_RS20395 PF13145 PPIC-type PPIASE domain F3090_RS20400 PF00216 Bacterial DNA-binding protein F3090_RS20405 PF00004 ATPase family associated with various cellular activities (AAA) F3090_RS20405 PF02190 ATP-dependent protease La (LON) substrate-binding domain F3090_RS20405 PF05362 Lon protease (S16) C-terminal proteolytic domain F3090_RS20410 PF07724 AAA domain (Cdc48 subfamily) F3090_RS20410 PF10431 C-terminal, D2-small domain, of ClpB protein F3090_RS20410 PF06689 ClpX C4-type zinc finger F3090_RS20415 PF00574 Clp protease F3090_RS20420 PF05697 Bacterial trigger factor protein (TF) F3090_RS20420 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase F3090_RS20420 PF05698 Bacterial trigger factor protein (TF) C-terminus F3090_RS20425 PF01722 BolA-like protein F3090_RS20430 PF03923 Uncharacterized lipoprotein F3090_RS20430 PF08139 Prokaryotic membrane lipoprotein lipid attachment site F3090_RS20435 PF07690 Major Facilitator Superfamily F3090_RS20440 PF06481 COX Aromatic Rich Motif F3090_RS20440 PF00116 Cytochrome C oxidase subunit II, periplasmic domain F3090_RS20445 PF00115 Cytochrome C and Quinol oxidase polypeptide I F3090_RS20450 PF00510 Cytochrome c oxidase subunit III F3090_RS20455 PF03626 Prokaryotic Cytochrome C oxidase subunit IV F3090_RS20460 PF01040 UbiA prenyltransferase family F3090_RS20470 PF01614 Bacterial transcriptional regulator F3090_RS20470 PF09339 IclR helix-turn-helix domain F3090_RS20475 PF08501 Shikimate dehydrogenase substrate binding domain F3090_RS20475 PF18317 Shikimate 5'-dehydrogenase C-terminal domain F3090_RS20475 PF01488 Shikimate / quinate 5-dehydrogenase F3090_RS20480 PF00890 FAD binding domain F3090_RS20490 PF00890 FAD binding domain F3090_RS20500 PF07690 Major Facilitator Superfamily F3090_RS20505 PF01408 Oxidoreductase family, NAD-binding Rossmann fold F3090_RS20505 PF02894 Oxidoreductase family, C-terminal alpha/beta domain F3090_RS20510 PF07690 Major Facilitator Superfamily F3090_RS20515 PF04461 Protein of unknown function (DUF520) F3090_RS20520 PF08546 Ketopantoate reductase PanE/ApbA C terminal F3090_RS20520 PF02558 Ketopantoate reductase PanE/ApbA F3090_RS20525 PF01965 DJ-1/PfpI family F3090_RS20535 PF02568 Thiamine biosynthesis protein (ThiI) F3090_RS20535 PF02926 THUMP domain F3090_RS20540 PF02609 Exonuclease VII small subunit F3090_RS20545 PF00348 Polyprenyl synthetase F3090_RS20550 PF02780 Transketolase, C-terminal domain F3090_RS20550 PF13292 1-deoxy-D-xylulose-5-phosphate synthase F3090_RS20550 PF02779 Transketolase, pyrimidine binding domain F3090_RS20555 PF00248 Aldo/keto reductase family F3090_RS20560 PF04608 Phosphatidylglycerophosphatase A F3090_RS20565 PF02769 AIR synthase related protein, C-terminal domain F3090_RS20565 PF00586 AIR synthase related protein, N-terminal domain F3090_RS20570 PF01029 NusB family F3090_RS20575 PF00885 6,7-dimethyl-8-ribityllumazine synthase F3090_RS20580 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region F3090_RS20580 PF01872 RibD C-terminal domain F3090_RS20585 PF03477 ATP cone domain F3090_RS20590 PF11622 Protein of unknown function (DUF3251) F3090_RS20595 PF03502 Nucleoside-specific channel-forming protein, Tsx F3090_RS20610 PF02355 Protein export membrane protein F3090_RS20610 PF07549 SecD/SecF GG Motif F3090_RS20615 PF13721 SecD export protein N-terminal TM region F3090_RS20615 PF02355 Protein export membrane protein F3090_RS20615 PF07549 SecD/SecF GG Motif F3090_RS20620 PF02699 Preprotein translocase subunit F3090_RS20625 PF01702 Queuine tRNA-ribosyltransferase F3090_RS20630 PF02547 Queuosine biosynthesis protein F3090_RS20640 PF04336 Acyl carrier protein phosphodiesterase F3090_RS20645 PF00578 AhpC/TSA family F3090_RS20645 PF10417 C-terminal domain of 1-Cys peroxiredoxin F3090_RS20655 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 F3090_RS20665 PF03611 PTS system sugar-specific permease component F3090_RS20675 PF13737 Transposase DDE domain F3090_RS20685 PF01116 Fructose-bisphosphate aldolase class-II F3090_RS20690 PF01979 Amidohydrolase family F3090_RS20700 PF00857 Isochorismatase family F3090_RS20705 PF03466 LysR substrate binding domain F3090_RS20705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3090_RS20710 PF02903 Alpha amylase, N-terminal ig-like domain F3090_RS20710 PF00128 Alpha amylase, catalytic domain F3090_RS20715 PF00324 Amino acid permease F3090_RS20720 PF05525 Branched-chain amino acid transport protein F3090_RS20725 PF00512 His Kinase A (phospho-acceptor) domain F3090_RS20725 PF00989 PAS fold F3090_RS20725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3090_RS20725 PF11808 Phosphate regulon sensor protein PhoR F3090_RS20730 PF00486 Transcriptional regulatory protein, C terminal F3090_RS20730 PF00072 Response regulator receiver domain F3090_RS20735 PF00149 Calcineurin-like phosphoesterase F3090_RS20735 PF12320 Type 5 capsule protein repressor C-terminal domain F3090_RS20740 PF13476 AAA domain F3090_RS20745 PF00480 ROK family F3090_RS20750 PF04381 Putative exonuclease, RdgC F3090_RS20755 PF06865 Pyrimidine/purine nucleoside phosphorylase F3090_RS20760 PF07302 AroM protein F3090_RS20765 PF16362 YaiA protein F3090_RS20770 PF01202 Shikimate kinase F3090_RS20775 PF09849 Uncharacterized protein conserved in bacteria (DUF2076) F3090_RS20780 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 F3090_RS20785 PF03807 NADP oxidoreductase coenzyme F420-dependent F3090_RS20785 PF14748 Pyrroline-5-carboxylate reductase dimerisation F3090_RS20790 PF07769 psiF repeat F3090_RS20795 PF00245 Alkaline phosphatase F3090_RS20800 PF10796 Sigma-S stabilisation anti-adaptor protein F3090_RS20805 PF07690 Major Facilitator Superfamily F3090_RS20815 PF07478 D-ala D-ala ligase C-terminus F3090_RS20815 PF01820 D-ala D-ala ligase N-terminus F3090_RS20820 PF10953 Protein of unknown function (DUF2754) F3090_RS20825 PF10954 Protein of unknown function (DUF2755) F3090_RS20830 PF07759 Protein of unknown function (DUF1615) F3090_RS20835 PF05992 SbmA/BacA-like family F3090_RS20840 PF00857 Isochorismatase family F3090_RS20845 PF00144 Beta-lactamase F3090_RS20850 PF00490 Delta-aminolevulinic acid dehydratase F3090_RS20860 PF02668 Taurine catabolism dioxygenase TauD, TfdA family F3090_RS20865 PF00528 Binding-protein-dependent transport system inner membrane component F3090_RS20870 PF00005 ABC transporter F3090_RS20875 PF04069 Substrate binding domain of ABC-type glycine betaine transport system F3090_RS20880 PF02574 Homocysteine S-methyltransferase F3090_RS20885 PF00324 Amino acid permease F3090_RS20895 PF00324 Amino acid permease F3090_RS20900 PF06751 Ethanolamine ammonia lyase large subunit (EutB) F3090_RS20905 PF05985 Ethanolamine ammonia-lyase light chain (EutC) F3090_RS20915 PF13458 Periplasmic binding protein F3090_RS20920 PF02653 Branched-chain amino acid transport system / permease component F3090_RS20925 PF02653 Branched-chain amino acid transport system / permease component F3090_RS20925 PF11862 Domain of unknown function (DUF3382) F3090_RS20930 PF12399 Branched-chain amino acid ATP-binding cassette transporter F3090_RS20930 PF00005 ABC transporter F3090_RS20935 PF00005 ABC transporter F3090_RS20945 PF00497 Bacterial extracellular solute-binding proteins, family 3 F3090_RS20950 PF00005 ABC transporter F3090_RS20955 PF00528 Binding-protein-dependent transport system inner membrane component F3090_RS20960 PF00528 Binding-protein-dependent transport system inner membrane component F3090_RS20975 PF15976 CS1-pili formation C-terminal F3090_RS20975 PF16967 E-set like domain F3090_RS20980 PF18649 EcpB C-terminal domain F3090_RS20985 PF16449 Fimbrillin MatB F3090_RS20990 PF00196 Bacterial regulatory proteins, luxR family F3090_RS20995 PF00005 ABC transporter F3090_RS21005 PF00528 Binding-protein-dependent transport system inner membrane component F3090_RS21010 PF00528 Binding-protein-dependent transport system inner membrane component F3090_RS21030 PF00877 NlpC/P60 family F3090_RS21035 PF00267 Gram-negative porin F3090_RS21040 PF01472 PUA domain F3090_RS21040 PF00696 Amino acid kinase family F3090_RS21045 PF00171 Aldehyde dehydrogenase family F3090_RS21065 PF13673 Acetyltransferase (GNAT) domain F3090_RS21065 PF04229 GrpB protein F3090_RS21085 PF00239 Resolvase, N terminal domain F3090_RS21085 PF02796 Helix-turn-helix domain of resolvase F3090_RS21100 PF01381 Helix-turn-helix F3090_RS21135 PF00676 Dehydrogenase E1 component F3090_RS21140 PF02780 Transketolase, C-terminal domain F3090_RS21140 PF02779 Transketolase, pyrimidine binding domain F3090_RS21145 PF02817 e3 binding domain F3090_RS21145 PF00364 Biotin-requiring enzyme F3090_RS21145 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) F3090_RS21150 PF07992 Pyridine nucleotide-disulphide oxidoreductase F3090_RS21150 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain F3090_RS21160 PF13847 Methyltransferase domain F3090_RS21165 PF09857 Putative toxin of bacterial toxin-antitoxin pair F3090_RS21170 PF08943 CsiD F3090_RS21175 PF01266 FAD dependent oxidoreductase F3090_RS21180 PF00171 Aldehyde dehydrogenase family F3090_RS21185 PF00202 Aminotransferase class-III F3090_RS21190 PF00324 Amino acid permease F3090_RS21195 PF00392 Bacterial regulatory proteins, gntR family F3090_RS21195 PF07729 FCD domain F3090_RS21200 PF07417 Sigma factor-binding transcriptional regulator Crl F3090_RS21205 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) F3090_RS21210 PF00156 Phosphoribosyl transferase domain F3090_RS21215 PF01546 Peptidase family M20/M25/M40 F3090_RS21215 PF07687 Peptidase dimerisation domain F3090_RS21220 PF13673 Acetyltransferase (GNAT) domain F3090_RS21225 PF11798 IMS family HHH motif F3090_RS21225 PF00817 impB/mucB/samB family F3090_RS21225 PF11799 impB/mucB/samB family C-terminal domain F3090_RS21230 PF03009 Glycerophosphoryl diester phosphodiesterase family F3090_RS21235 PF04400 (Na+)-NQR maturation NqrM F3090_RS21240 PF00970 Oxidoreductase FAD-binding domain F3090_RS21240 PF00111 2Fe-2S iron-sulfur cluster binding domain F3090_RS21240 PF00175 Oxidoreductase NAD-binding domain F3090_RS21245 PF02508 Rnf-Nqr subunit, membrane protein F3090_RS21250 PF02508 Rnf-Nqr subunit, membrane protein F3090_RS21255 PF04205 FMN-binding domain F3090_RS21260 PF03116 NQR2, RnfD, RnfE family F3090_RS21265 PF11973 NQRA C-terminal domain F3090_RS21265 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) F3090_RS21270 PF03734 L,D-transpeptidase catalytic domain F3090_RS21275 PF13230 Glutamine amidotransferases class-II F3090_RS21280 PF13580 SIS domain F3090_RS21285 PF00441 Acyl-CoA dehydrogenase, C-terminal domain F3090_RS21285 PF09317 Domain of unknown function (DUF1974) F3090_RS21285 PF02771 Acyl-CoA dehydrogenase, N-terminal domain F3090_RS21285 PF02770 Acyl-CoA dehydrogenase, middle domain F3090_RS21290 PF00795 Carbon-nitrogen hydrolase F3090_RS21295 PF01810 LysE type translocator F3090_RS21300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3090_RS21300 PF03466 LysR substrate binding domain F3090_RS21310 PF00929 Exonuclease F3090_RS21315 PF00075 RNase H F3090_RS21320 PF08241 Methyltransferase domain F3090_RS21325 PF00753 Metallo-beta-lactamase superfamily F3090_RS21325 PF16123 Hydroxyacylglutathione hydrolase C-terminus F3090_RS21330 PF01476 LysM domain F3090_RS21330 PF01464 Transglycosylase SLT domain F3090_RS21335 PF08241 Methyltransferase domain F3090_RS21340 PF03372 Endonuclease/Exonuclease/phosphatase family F3090_RS21345 PF07690 Major Facilitator Superfamily F3090_RS21350 PF03466 LysR substrate binding domain F3090_RS21350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3090_RS21355 PF00248 Aldo/keto reductase family F3090_RS21395 PF00005 ABC transporter F3090_RS21395 PF09383 NIL domain F3090_RS21400 PF00528 Binding-protein-dependent transport system inner membrane component F3090_RS21405 PF03180 NLPA lipoprotein F3090_RS21410 PF16358 RcsF lipoprotein F3090_RS21415 PF18389 TrmO C-terminal domain F3090_RS21415 PF01980 tRNA-methyltransferase O F3090_RS21420 PF04073 Aminoacyl-tRNA editing domain F3090_RS21420 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) F3090_RS21420 PF03129 Anticodon binding domain F3090_RS21425 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family F3090_RS21430 PF17185 NlpE C-terminal OB domain F3090_RS21430 PF04170 NlpE N-terminal domain F3090_RS21435 PF00472 RF-1 domain F3090_RS21440 PF07152 YaeQ protein F3090_RS21445 PF06786 Uncharacterised protein family (UPF0253) F3090_RS21450 PF07073 Modulator of Rho-dependent transcription termination (ROF) F3090_RS21455 PF01171 PP-loop family F3090_RS21455 PF11734 TilS substrate C-terminal domain F3090_RS21455 PF09179 TilS substrate binding domain F3090_RS21460 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily F3090_RS21465 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain F3090_RS21465 PF01276 Orn/Lys/Arg decarboxylase, major domain F3090_RS21465 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain F3090_RS21470 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit F3090_RS21475 PF07733 Bacterial DNA polymerase III alpha NTPase domain F3090_RS21475 PF17657 Bacterial DNA polymerase III alpha subunit finger domain F3090_RS21475 PF14579 Helix-hairpin-helix motif F3090_RS21475 PF02811 PHP domain F3090_RS21475 PF01336 OB-fold nucleic acid binding domain F3090_RS21480 PF01351 Ribonuclease HII F3090_RS21485 PF02684 Lipid-A-disaccharide synthetase F3090_RS21490 PF00132 Bacterial transferase hexapeptide (six repeats) F3090_RS21490 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 F3090_RS21495 PF07977 FabA-like domain F3090_RS21500 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD F3090_RS21500 PF00132 Bacterial transferase hexapeptide (six repeats) F3090_RS21505 PF03938 Outer membrane protein (OmpH-like) F3090_RS21510 PF07244 Surface antigen variable number repeat F3090_RS21510 PF01103 Surface antigen F3090_RS21515 PF17820 PDZ domain F3090_RS21515 PF02163 Peptidase family M50 F3090_RS21525 PF01255 Putative undecaprenyl diphosphate synthase F3090_RS21530 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase F3090_RS21530 PF13288 DXP reductoisomerase C-terminal domain F3090_RS21530 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain F3090_RS21535 PF01765 Ribosome recycling factor F3090_RS21540 PF00696 Amino acid kinase family F3090_RS21545 PF00889 Elongation factor TS F3090_RS21550 PF00318 Ribosomal protein S2 F3090_RS21555 PF00557 Metallopeptidase family M24 F3090_RS21560 PF08335 GlnD PII-uridylyltransferase F3090_RS21560 PF01909 Nucleotidyltransferase domain F3090_RS21560 PF01842 ACT domain F3090_RS21560 PF01966 HD domain F3090_RS21565 PF14602 Hexapeptide repeat of succinyl-transferase F3090_RS21565 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal F3090_RS21565 PF00132 Bacterial transferase hexapeptide (six repeats) F3090_RS21570 PF11944 Protein of unknown function (DUF3461) F3090_RS21575 PF05651 Putative sugar diacid recognition F3090_RS21575 PF13556 PucR C-terminal helix-turn-helix domain F3090_RS21575 PF17853 GGDEF-like domain F3090_RS21580 PF00595 PDZ domain F3090_RS21585 PF13286 Phosphohydrolase-associated domain F3090_RS21585 PF01966 HD domain F3090_RS21590 PF01048 Phosphorylase superfamily F3090_RS21595 PF01497 Periplasmic binding protein F3090_RS21600 PF03458 UPF0126 domain F3090_RS21605 PF01521 Iron-sulphur cluster biosynthesis F3090_RS21610 PF00654 Voltage gated chloride channel F3090_RS21615 PF00202 Aminotransferase class-III F3090_RS21620 PF01032 FecCD transport family F3090_RS21625 PF01497 Periplasmic binding protein F3090_RS21630 PF00005 ABC transporter F3090_RS21635 PF07715 TonB-dependent Receptor Plug Domain F3090_RS21635 PF00593 TonB dependent receptor F3090_RS21640 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal F3090_RS21640 PF00912 Transglycosylase F3090_RS21640 PF00905 Penicillin binding protein transpeptidase domain F3090_RS21640 PF14814 Bifunctional transglycosylase second domain F3090_RS21650 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) F3090_RS21655 PF16537 Type II secretion system protein B F3090_RS21660 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) F3090_RS21660 PF03714 Bacterial pullanase-associated domain F3090_RS21660 PF18494 Pullulanase Ins domain F3090_RS21660 PF17967 Pullulanase N2 domain F3090_RS21660 PF11852 Domain of unknown function (DUF3372) F3090_RS21670 PF11356 Type II secretion system protein C F3090_RS21675 PF00263 Bacterial type II and III secretion system protein F3090_RS21675 PF03958 Bacterial type II/III secretion system short domain F3090_RS21680 PF00437 Type II/IV secretion system protein F3090_RS21685 PF00482 Type II secretion system (T2SS), protein F F3090_RS21690 PF08334 Type II secretion system (T2SS), protein G F3090_RS21690 PF07963 Prokaryotic N-terminal methylation motif F3090_RS21695 PF07963 Prokaryotic N-terminal methylation motif F3090_RS21700 PF07963 Prokaryotic N-terminal methylation motif F3090_RS21700 PF02501 Type II secretion system (T2SS), protein I F3090_RS21705 PF11612 Type II secretion system (T2SS), protein J F3090_RS21705 PF07963 Prokaryotic N-terminal methylation motif F3090_RS21710 PF03934 Type II secretion system (T2SS), protein K F3090_RS21715 PF12693 GspL periplasmic domain F3090_RS21715 PF05134 Type II secretion system (T2SS), protein L F3090_RS21720 PF04612 Type II secretion system (T2SS), protein M F3090_RS21725 PF01203 Type II secretion system (T2SS), protein N F3090_RS21730 PF01478 Type IV leader peptidase family F3090_RS21730 PF06750 Bacterial Peptidase A24 N-terminal domain F3090_RS21735 PF08482 ATP-dependent helicase C-terminal F3090_RS21735 PF04408 Helicase associated domain (HA2) F3090_RS21735 PF00271 Helicase conserved C-terminal domain F3090_RS21735 PF00270 DEAD/DEAH box helicase F3090_RS21740 PF02834 LigT like Phosphoesterase F3090_RS21745 PF17746 SfsA N-terminal OB domain F3090_RS21745 PF03749 Sugar fermentation stimulation protein RE domain F3090_RS21750 PF01258 Prokaryotic dksA/traR C4-type zinc finger F3090_RS21755 PF00749 tRNA synthetases class I (E and Q), catalytic domain F3090_RS21760 PF12626 Polymerase A arginine-rich C-terminus F3090_RS21760 PF01743 Poly A polymerase head domain F3090_RS21760 PF12627 Probable RNA and SrmB- binding site of polymerase A F3090_RS21765 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) F3090_RS21770 PF02548 Ketopantoate hydroxymethyltransferase F3090_RS21775 PF02569 Pantoate-beta-alanine ligase F3090_RS21780 PF02261 Aspartate decarboxylase F3090_RS21785 PF01522 Polysaccharide deacetylase F3090_RS21790 PF03610 PTS system fructose IIA component F3090_RS21795 PF01061 ABC-2 type transporter F3090_RS21800 PF00005 ABC transporter F3090_RS21805 PF00484 Carbonic anhydrase F3090_RS21810 PF00156 Phosphoribosyl transferase domain F3090_RS21820 PF01011 PQQ enzyme repeat F3090_RS21825 PF07731 Multicopper oxidase F3090_RS21825 PF07732 Multicopper oxidase F3090_RS21825 PF00394 Multicopper oxidase F3090_RS21830 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) F3090_RS21845 PF17284 Spermidine synthase tetramerisation domain F3090_RS21850 PF02675 S-adenosylmethionine decarboxylase F3090_RS21855 PF06062 Uncharacterised protein family (UPF0231) F3090_RS21860 PF11791 Aconitate B N-terminal domain F3090_RS21860 PF00330 Aconitase family (aconitate hydratase) F3090_RS21860 PF06434 Aconitate hydratase 2 N-terminus F3090_RS21865 PF11737 Protein of unknown function (DUF3300) F3090_RS21880 PF07992 Pyridine nucleotide-disulphide oxidoreductase F3090_RS21880 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain F3090_RS21885 PF02817 e3 binding domain F3090_RS21885 PF00364 Biotin-requiring enzyme F3090_RS21885 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) F3090_RS21890 PF17831 Pyruvate dehydrogenase E1 component middle domain F3090_RS21890 PF00456 Transketolase, thiamine diphosphate binding domain F3090_RS21895 PF00392 Bacterial regulatory proteins, gntR family F3090_RS21895 PF07729 FCD domain F3090_RS21900 PF00324 Amino acid permease F3090_RS21910 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain F3090_RS21910 PF04616 Glycosyl hydrolases family 43 F3090_RS21915 PF17113 Regulatory signalling modulator protein AmpE F3090_RS21920 PF01510 N-acetylmuramoyl-L-alanine amidase F3090_RS21925 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain F3090_RS21925 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain F3090_RS21930 PF07963 Prokaryotic N-terminal methylation motif F3090_RS21935 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain F3090_RS21935 PF00437 Type II/IV secretion system protein F3090_RS21940 PF00482 Type II secretion system (T2SS), protein F F3090_RS21945 PF00478 IMP dehydrogenase / GMP reductase domain F3090_RS21950 PF01121 Dephospho-CoA kinase F3090_RS21955 PF07072 Cell division protein F3090_RS21960 PF03884 DNA gyrase inhibitor YacG F3090_RS21965 PF00293 NUDIX domain F3090_RS21970 PF07516 SecA Wing and Scaffold domain F3090_RS21970 PF07517 SecA DEAD-like domain F3090_RS21970 PF02810 SEC-C motif F3090_RS21970 PF01043 SecA preprotein cross-linking domain F3090_RS21975 PF06558 Secretion monitor precursor protein (SecM) F3090_RS21980 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase F3090_RS21985 PF00091 Tubulin/FtsZ family, GTPase domain F3090_RS21985 PF12327 FtsZ family, C-terminal domain F3090_RS21990 PF02491 SHS2 domain inserted in FTSA F3090_RS21995 PF08478 POTRA domain, FtsQ-type F3090_RS21995 PF03799 Cell division protein FtsQ F3090_RS22000 PF01820 D-ala D-ala ligase N-terminus F3090_RS22000 PF07478 D-ala D-ala ligase C-terminus F3090_RS22005 PF08245 Mur ligase middle domain F3090_RS22005 PF01225 Mur ligase family, catalytic domain F3090_RS22005 PF02875 Mur ligase family, glutamate ligase domain F3090_RS22010 PF03033 Glycosyltransferase family 28 N-terminal domain F3090_RS22010 PF04101 Glycosyltransferase family 28 C-terminal domain F3090_RS22015 PF01098 Cell cycle protein F3090_RS22020 PF02875 Mur ligase family, glutamate ligase domain F3090_RS22020 PF08245 Mur ligase middle domain F3090_RS22025 PF00953 Glycosyl transferase family 4 F3090_RS22025 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 F3090_RS22030 PF01225 Mur ligase family, catalytic domain F3090_RS22030 PF02875 Mur ligase family, glutamate ligase domain F3090_RS22030 PF08245 Mur ligase middle domain F3090_RS22035 PF01225 Mur ligase family, catalytic domain F3090_RS22035 PF02875 Mur ligase family, glutamate ligase domain F3090_RS22035 PF08245 Mur ligase middle domain F3090_RS22040 PF00905 Penicillin binding protein transpeptidase domain F3090_RS22040 PF03717 Penicillin-binding Protein dimerisation domain F3090_RS22045 PF04999 Cell division protein FtsL F3090_RS22050 PF01795 MraW methylase family F3090_RS22055 PF02381 MraZ protein, putative antitoxin-like F3090_RS22060 PF00356 Bacterial regulatory proteins, lacI family F3090_RS22060 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family F3090_RS22065 PF10369 Small subunit of acetolactate synthase F3090_RS22070 PF00205 Thiamine pyrophosphate enzyme, central domain F3090_RS22070 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain F3090_RS22070 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain F3090_RS22075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3090_RS22075 PF03466 LysR substrate binding domain F3090_RS22085 PF00682 HMGL-like F3090_RS22085 PF08502 LeuA allosteric (dimerisation) domain F3090_RS22090 PF00180 Isocitrate/isopropylmalate dehydrogenase F3090_RS22095 PF00330 Aconitase family (aconitate hydratase) F3090_RS22100 PF00694 Aconitase C-terminal domain F3090_RS22105 PF07992 Pyridine nucleotide-disulphide oxidoreductase F3090_RS22105 PF00724 NADH:flavin oxidoreductase / NADH oxidase family F3090_RS22110 PF08501 Shikimate dehydrogenase substrate binding domain F3090_RS22110 PF18317 Shikimate 5'-dehydrogenase C-terminal domain F3090_RS22115 PF07690 Major Facilitator Superfamily F3090_RS22120 PF01487 Type I 3-dehydroquinase F3090_RS22125 PF03466 LysR substrate binding domain F3090_RS22125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3090_RS22130 PF07690 Major Facilitator Superfamily F3090_RS22135 PF07690 Major Facilitator Superfamily F3090_RS22145 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F3090_RS22145 PF12793 Sugar transport-related sRNA regulator N-term F3090_RS22155 PF00528 Binding-protein-dependent transport system inner membrane component F3090_RS22160 PF00005 ABC transporter F3090_RS22165 PF09335 SNARE associated Golgi protein F3090_RS22170 PF12833 Helix-turn-helix domain F3090_RS22170 PF02311 AraC-like ligand binding domain F3090_RS22175 PF02782 FGGY family of carbohydrate kinases, C-terminal domain F3090_RS22180 PF02610 L-arabinose isomerase F3090_RS22180 PF11762 L-arabinose isomerase C-terminal domain F3090_RS22185 PF00596 Class II Aldolase and Adducin N-terminal domain F3090_RS22190 PF03104 DNA polymerase family B, exonuclease domain F3090_RS22190 PF00136 DNA polymerase family B F3090_RS22195 PF18337 RapA N-terminal Tudor like domain F3090_RS22195 PF18339 RapA N-terminal Tudor like domain 1 F3090_RS22195 PF00271 Helicase conserved C-terminal domain F3090_RS22195 PF12137 RNA polymerase recycling family C-terminal F3090_RS22195 PF00176 SNF2 family N-terminal domain F3090_RS22200 PF00849 RNA pseudouridylate synthase F3090_RS22205 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase F3090_RS22210 PF03390 2-hydroxycarboxylate transporter family F3090_RS22215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3090_RS22215 PF17203 Single cache domain 3 F3090_RS22220 PF00072 Response regulator receiver domain F3090_RS22220 PF12431 Transcriptional regulator F3090_RS22225 PF00226 DnaJ domain F3090_RS22225 PF05099 Tellurite resistance protein TerB F3090_RS22230 PF03968 OstA-like protein F3090_RS22230 PF04453 LPS transport system D F3090_RS22235 PF09312 SurA N-terminal domain F3090_RS22235 PF00639 PPIC-type PPIASE domain F3090_RS22240 PF04166 Pyridoxal phosphate biosynthetic protein PdxA F3090_RS22245 PF00398 Ribosomal RNA adenine dimethylase F3090_RS22250 PF04379 ApaG domain F3090_RS22255 PF00149 Calcineurin-like phosphoesterase F3090_RS22260 PF00186 Dihydrofolate reductase F3090_RS22265 PF00999 Sodium/hydrogen exchanger family F3090_RS22265 PF02254 TrkA-N domain F3090_RS22270 PF02525 Flavodoxin-like fold F3090_RS22275 PF06004 Bacterial protein of unknown function (DUF903) F3090_RS22280 PF02142 MGS-like domain F3090_RS22280 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain F3090_RS22280 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain F3090_RS22285 PF00117 Glutamine amidotransferase class-I F3090_RS22285 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain F3090_RS22290 PF05173 Dihydrodipicolinate reductase, C-terminus F3090_RS22290 PF01113 Dihydrodipicolinate reductase, N-terminus F3090_RS22295 PF01411 tRNA synthetases class II (A) F3090_RS22295 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain F3090_RS22295 PF02272 DHHA1 domain F3090_RS22300 PF03466 LysR substrate binding domain F3090_RS22300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3090_RS22310 PF01156 Inosine-uridine preferring nucleoside hydrolase F3090_RS22315 PF02401 LytB protein F3090_RS22320 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase F3090_RS22325 PF01252 Signal peptidase (SPase) II F3090_RS22330 PF06827 Zinc finger found in FPG and IleRS F3090_RS22330 PF00133 tRNA synthetases class I (I, L, M and V) F3090_RS22330 PF08264 Anticodon-binding domain of tRNA F3090_RS22335 PF06574 FAD synthetase F3090_RS22335 PF01687 Riboflavin kinase F3090_RS22340 PF01649 Ribosomal protein S20 F3090_RS22345 PF03466 LysR substrate binding domain F3090_RS22345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3090_RS22350 PF06965 Na+/H+ antiporter 1 F3090_RS22355 PF01556 DnaJ C terminal domain F3090_RS22355 PF00684 DnaJ central domain F3090_RS22355 PF00226 DnaJ domain F3090_RS22360 PF00012 Hsp70 protein F3090_RS22365 PF10807 Protein of unknown function (DUF2541) F3090_RS22370 PF03981 Ubiquinol-cytochrome C chaperone F3090_RS22370 PF13099 Domain of unknown function (DUF3944) F3090_RS22375 PF01184 GPR1/FUN34/yaaH family F3090_RS22385 PF00994 Probable molybdopterin binding domain F3090_RS22390 PF00923 Transaldolase/Fructose-6-phosphate aldolase F3090_RS22395 PF01235 Sodium:alanine symporter family F3090_RS22400 PF03883 Peroxide stress protein YaaA F3090_RS22410 PF14821 Threonine synthase N terminus F3090_RS22410 PF00291 Pyridoxal-phosphate dependent enzyme F3090_RS22415 PF08544 GHMP kinases C terminal F3090_RS22415 PF00288 GHMP kinases N terminal domain F3090_RS22420 PF03447 Homoserine dehydrogenase, NAD binding domain F3090_RS22420 PF00742 Homoserine dehydrogenase F3090_RS22420 PF00696 Amino acid kinase family F3090_RS22420 PF01842 ACT domain F3090_RS22420 PF13840 ACT domain F3090_RS22425 PF08254 Threonine leader peptide F3090_RS22430 PF00588 SpoU rRNA Methylase family F3090_RS22440 PF00072 Response regulator receiver domain F3090_RS22440 PF00486 Transcriptional regulatory protein, C terminal F3090_RS22445 PF06123 Inner membrane protein CreD F3090_RS22450 PF00672 HAMP domain F3090_RS22450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3090_RS22450 PF00512 His Kinase A (phospho-acceptor) domain F3090_RS22455 PF00486 Transcriptional regulatory protein, C terminal F3090_RS22455 PF00072 Response regulator receiver domain F3090_RS22460 PF05981 CreA protein F3090_RS22465 PF06445 GyrI-like small molecule binding domain F3090_RS22465 PF12833 Helix-turn-helix domain F3090_RS22470 PF00300 Histidine phosphatase superfamily (branch 1) F3090_RS22475 PF01931 Protein of unknown function DUF84 F3090_RS22480 PF01371 Trp repressor protein F3090_RS22485 PF14718 Soluble lytic murein transglycosylase L domain F3090_RS22485 PF01464 Transglycosylase SLT domain F3090_RS22490 PF00005 ABC transporter F3090_RS22490 PF12848 ABC transporter F3090_RS22495 PF01381 Helix-turn-helix F3090_RS22495 PF13521 AAA domain F3090_RS22500 PF18073 Rubredoxin metal binding domain F3090_RS22505 PF18429 Domain of unknown function (DUF5609) F3090_RS22510 PF10144 Bacterial virulence factor haemolysin F3090_RS22515 PF10437 Bacterial lipoate protein ligase C-terminus F3090_RS22515 PF03099 Biotin/lipoate A/B protein ligase family F3090_RS22520 PF01048 Phosphorylase superfamily F3090_RS22525 PF01676 Metalloenzyme superfamily F3090_RS22530 PF00591 Glycosyl transferase family, a/b domain F3090_RS22530 PF02885 Glycosyl transferase family, helical bundle domain F3090_RS22530 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain F3090_RS22535 PF01791 DeoC/LacD family aldolase F3090_RS22540 PF07670 Nucleoside recognition F3090_RS22540 PF07662 Na+ dependent nucleoside transporter C-terminus F3090_RS22540 PF01773 Na+ dependent nucleoside transporter N-terminus F3090_RS22545 PF01026 TatD related DNase F3090_RS22550 PF01734 Patatin-like phospholipase F3090_RS22555 PF07043 Protein of unknown function (DUF1328) F3090_RS22560 PF04972 BON domain F3090_RS22565 PF00009 Elongation factor Tu GTP binding domain F3090_RS22565 PF16658 Class II release factor RF3, C-terminal domain F3090_RS22565 PF03144 Elongation factor Tu domain 2 F3090_RS22570 PF13419 Haloacid dehalogenase-like hydrolase F3090_RS22575 PF00583 Acetyltransferase (GNAT) family F3090_RS22580 PF03603 DNA polymerase III psi subunit F3090_RS22585 PF05175 Methyltransferase small domain F3090_RS22585 PF08468 Methyltransferase small domain N-terminal F3090_RS22605 PF07256 Protein of unknown function (DUF1435) F3090_RS22615 PF00990 Diguanylate cyclase, GGDEF domain F3090_RS22620 PF11575 FhuF 2Fe-2S C-terminal domain F3090_RS22620 PF06276 Ferric iron reductase FhuF-like transporter F3090_RS22625 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit F3090_RS22625 PF02378 Phosphotransferase system, EIIC F3090_RS22630 PF04073 Aminoacyl-tRNA editing domain F3090_RS22635 PF00196 Bacterial regulatory proteins, luxR family F3090_RS22640 PF00196 Bacterial regulatory proteins, luxR family F3090_RS22650 PF01494 FAD binding domain F3090_RS22655 PF06738 Putative threonine/serine exporter F3090_RS22660 PF12821 Threonine/Serine exporter, ThrE F3090_RS22665 PF17948 DnaT DNA-binding domain F3090_RS22670 PF01695 IstB-like ATP binding protein F3090_RS22675 PF10696 Protein of unknown function (DUF2501) F3090_RS22680 PF00884 Sulfatase F3090_RS22685 PF04754 Putative transposase, YhgA-like F3090_RS22690 PF01380 SIS domain F3090_RS22695 PF01380 SIS domain F3090_RS22700 PF03613 PTS system mannose/fructose/sorbose family IID component F3090_RS22705 PF03609 PTS system sorbose-specific iic component F3090_RS22710 PF03830 PTS system sorbose subfamily IIB component F3090_RS22715 PF03830 PTS system sorbose subfamily IIB component F3090_RS22715 PF03610 PTS system fructose IIA component F3090_RS22720 PF03610 PTS system fructose IIA component F3090_RS22720 PF00874 PRD domain F3090_RS22720 PF00158 Sigma-54 interaction domain F3090_RS22725 PF01232 Mannitol dehydrogenase Rossmann domain F3090_RS22725 PF08125 Mannitol dehydrogenase C-terminal domain F3090_RS22730 PF00107 Zinc-binding dehydrogenase F3090_RS22730 PF08240 Alcohol dehydrogenase GroES-like domain F3090_RS22735 PF00392 Bacterial regulatory proteins, gntR family F3090_RS22735 PF07729 FCD domain F3090_RS22740 PF07690 Major Facilitator Superfamily F3090_RS22745 PF00814 Glycoprotease family F3090_RS22745 PF00583 Acetyltransferase (GNAT) family F3090_RS22750 PF00583 Acetyltransferase (GNAT) family F3090_RS22755 PF01380 SIS domain F3090_RS22755 PF01418 Helix-turn-helix domain, rpiR family F3090_RS22760 PF01081 KDPG and KHG aldolase F3090_RS22765 PF05035 2-keto-3-deoxy-galactonokinase F3090_RS22780 PF07969 Amidohydrolase family F3090_RS22795 PF02615 Malate/L-lactate dehydrogenase F3090_RS22805 PF01047 MarR family F3090_RS22815 PF01557 Fumarylacetoacetate (FAA) hydrolase family F3090_RS22820 PF01557 Fumarylacetoacetate (FAA) hydrolase family F3090_RS22825 PF00171 Aldehyde dehydrogenase family F3090_RS22830 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase F3090_RS22835 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase F3090_RS22840 PF01557 Fumarylacetoacetate (FAA) hydrolase family F3090_RS22845 PF03328 HpcH/HpaI aldolase/citrate lyase family F3090_RS22850 PF07690 Major Facilitator Superfamily F3090_RS22855 PF12833 Helix-turn-helix domain F3090_RS22860 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal F3090_RS22860 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal F3090_RS22865 PF01613 Flavin reductase like domain F3090_RS22880 PF13722 5TM C-terminal transporter carbon starvation CstA F3090_RS22880 PF02554 Carbon starvation protein CstA F3090_RS22885 PF04328 Selenoprotein, putative F3090_RS22890 PF07683 Cobalamin synthesis protein cobW C-terminal domain F3090_RS22890 PF02492 CobW/HypB/UreG, nucleotide-binding domain F3090_RS22900 PF00171 Aldehyde dehydrogenase family F3090_RS22905 PF04754 Putative transposase, YhgA-like F3090_RS22910 PF12833 Helix-turn-helix domain F3090_RS22910 PF02311 AraC-like ligand binding domain F3090_RS22920 PF04286 Protein of unknown function (DUF445) F3090_RS22925 PF07690 Major Facilitator Superfamily F3090_RS22935 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component F3090_RS22940 PF01869 BadF/BadG/BcrA/BcrD ATPase family F3090_RS22945 PF11823 Protein of unknown function (DUF3343) F3090_RS22955 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion F3090_RS22955 PF00529 HlyD membrane-fusion protein of T1SS F3090_RS22965 PF06568 Domain of unknown function (DUF1127) F3090_RS22970 PF00392 Bacterial regulatory proteins, gntR family F3090_RS22970 PF00155 Aminotransferase class I and II F3090_RS22980 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily F3090_RS22985 PF03466 LysR substrate binding domain F3090_RS22985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3090_RS22990 PF02525 Flavodoxin-like fold F3090_RS22995 PF02653 Branched-chain amino acid transport system / permease component F3090_RS23000 PF02653 Branched-chain amino acid transport system / permease component F3090_RS23005 PF00005 ABC transporter F3090_RS23010 PF13407 Periplasmic binding protein domain F3090_RS23015 PF00579 tRNA synthetases class I (W and Y) F3090_RS23020 PF13533 Biotin-lipoyl like F3090_RS23025 PF00005 ABC transporter F3090_RS23060 PF08007 Cupin superfamily protein F3090_RS23075 PF00512 His Kinase A (phospho-acceptor) domain F3090_RS23075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3090_RS23075 PF00672 HAMP domain F3090_RS23080 PF00486 Transcriptional regulatory protein, C terminal F3090_RS23080 PF00072 Response regulator receiver domain F3090_RS23085 PF02321 Outer membrane efflux protein F3090_RS23090 PF11604 Copper binding periplasmic protein CusF F3090_RS23095 PF00529 HlyD membrane-fusion protein of T1SS F3090_RS23095 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion F3090_RS23100 PF00873 AcrB/AcrD/AcrF family F3090_RS23110 PF08212 Lipocalin-like domain F3090_RS23115 PF13411 MerR HTH family regulatory protein F3090_RS23120 PF12680 SnoaL-like domain F3090_RS23125 PF00106 short chain dehydrogenase F3090_RS23160 PF08349 Protein of unknown function (DUF1722) F3090_RS23165 PF02264 LamB porin F3090_RS23180 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain F3090_RS23180 PF04616 Glycosyl hydrolases family 43 F3090_RS23200 PF17345 Family of unknown function (DUF5375) F3090_RS23225 PF04606 Ogr/Delta-like zinc finger F3090_RS23240 PF00589 Phage integrase family F3090_RS23240 PF13356 Arm DNA-binding domain F3090_RS23250 PF00484 Carbonic anhydrase F3090_RS23255 PF01740 STAS domain F3090_RS23255 PF00916 Sulfate permease family F3090_RS23260 PF08240 Alcohol dehydrogenase GroES-like domain F3090_RS23260 PF00107 Zinc-binding dehydrogenase F3090_RS23265 PF00528 Binding-protein-dependent transport system inner membrane component F3090_RS23270 PF00528 Binding-protein-dependent transport system inner membrane component F3090_RS23275 PF00149 Calcineurin-like phosphoesterase F3090_RS23280 PF00005 ABC transporter F3090_RS23280 PF17912 MalK OB fold domain F3090_RS23285 PF13416 Bacterial extracellular solute-binding protein F3090_RS23290 PF01261 Xylose isomerase-like TIM barrel F3090_RS23295 PF01261 Xylose isomerase-like TIM barrel F3090_RS23300 PF01408 Oxidoreductase family, NAD-binding Rossmann fold F3090_RS23300 PF02894 Oxidoreductase family, C-terminal alpha/beta domain F3090_RS23305 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain F3090_RS23305 PF00205 Thiamine pyrophosphate enzyme, central domain F3090_RS23305 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain F3090_RS23310 PF00294 pfkB family carbohydrate kinase F3090_RS23315 PF02685 Glucokinase F3090_RS23315 PF01380 SIS domain F3090_RS23315 PF01418 Helix-turn-helix domain, rpiR family F3090_RS23320 PF04962 KduI/IolB family F3090_RS23325 PF00171 Aldehyde dehydrogenase family F3090_RS23335 PF05872 Bacterial protein of unknown function (DUF853) F3090_RS23340 PF03739 Lipopolysaccharide export system permease LptF/LptG F3090_RS23345 PF03739 Lipopolysaccharide export system permease LptF/LptG F3090_RS23350 PF02789 Cytosol aminopeptidase family, N-terminal domain F3090_RS23350 PF00883 Cytosol aminopeptidase family, catalytic domain F3090_RS23355 PF04364 DNA polymerase III chi subunit, HolC F3090_RS23360 PF08264 Anticodon-binding domain of tRNA F3090_RS23360 PF00133 tRNA synthetases class I (I, L, M and V) F3090_RS23360 PF10458 Valyl tRNA synthetase tRNA binding arm F3090_RS23365 PF00583 Acetyltransferase (GNAT) family F3090_RS23370 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) F3090_RS23375 PF06877 Regulator of ribonuclease activity B F3090_RS23380 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain F3090_RS23380 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain F3090_RS23385 PF04074 YhcH/YjgK/YiaL F3090_RS23395 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain F3090_RS23395 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain F3090_RS23400 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain F3090_RS23400 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain F3090_RS23405 PF01042 Endoribonuclease L-PSP F3090_RS23410 PF00689 Cation transporting ATPase, C-terminus F3090_RS23410 PF00690 Cation transporter/ATPase, N-terminus F3090_RS23415 PF00356 Bacterial regulatory proteins, lacI family F3090_RS23420 PF00367 phosphotransferase system, EIIB F3090_RS23420 PF02378 Phosphotransferase system, EIIC F3090_RS23425 PF11941 Domain of unknown function (DUF3459) F3090_RS23425 PF00128 Alpha amylase, catalytic domain F3090_RS23430 PF02378 Phosphotransferase system, EIIC F3090_RS23435 PF02056 Family 4 glycosyl hydrolase F3090_RS23435 PF11975 Family 4 glycosyl hydrolase C-terminal domain F3090_RS23440 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit F3090_RS23455 PF13597 Anaerobic ribonucleoside-triphosphate reductase F3090_RS23455 PF03477 ATP cone domain F3090_RS23465 PF05016 ParE toxin of type II toxin-antitoxin system, parDE F3090_RS23470 PF04221 RelB antitoxin F3090_RS23475 PF05043 Mga helix-turn-helix domain F3090_RS23475 PF08279 HTH domain F3090_RS23475 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 F3090_RS23475 PF00874 PRD domain F3090_RS23480 PF10282 Lactonase, 7-bladed beta-propeller F3090_RS23485 PF07071 KDGP aldolase F3090_RS23490 PF03841 L-seryl-tRNA selenium transferase F3090_RS23495 PF01979 Amidohydrolase family F3090_RS23525 PF07361 Cytochrome b562 F3090_RS23530 PF01523 Putative modulator of DNA gyrase F3090_RS23535 PF04751 Protein of unknown function (DUF615) F3090_RS23555 PF01225 Mur ligase family, catalytic domain F3090_RS23555 PF08245 Mur ligase middle domain F3090_RS23555 PF02875 Mur ligase family, glutamate ligase domain F3090_RS23560 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain F3090_RS23565 PF02653 Branched-chain amino acid transport system / permease component F3090_RS23570 PF02653 Branched-chain amino acid transport system / permease component F3090_RS23575 PF00005 ABC transporter F3090_RS23580 PF13407 Periplasmic binding protein domain F3090_RS23585 PF00719 Inorganic pyrophosphatase F3090_RS23600 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like F3090_RS23605 PF04357 TamB, inner membrane protein subunit of TAM complex F3090_RS23610 PF17243 POTRA domain TamA domain 1 F3090_RS23610 PF07244 Surface antigen variable number repeat F3090_RS23610 PF01103 Surface antigen F3090_RS23615 PF01625 Peptide methionine sulfoxide reductase F3090_RS23620 PF01595 Cyclin M transmembrane N-terminal domain F3090_RS23620 PF00571 CBS domain F3090_RS23620 PF03471 Transporter associated domain F3090_RS23625 PF01306 LacY proton/sugar symporter F3090_RS23630 PF08533 Beta-galactosidase C-terminal domain F3090_RS23630 PF02449 Beta-galactosidase F3090_RS23630 PF08532 Beta-galactosidase trimerisation domain F3090_RS23635 PF02311 AraC-like ligand binding domain F3090_RS23635 PF12833 Helix-turn-helix domain F3090_RS23640 PF06526 Protein of unknown function (DUF1107) F3090_RS23645 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) F3090_RS23650 PF00459 Inositol monophosphatase family F3090_RS23655 PF02872 5'-nucleotidase, C-terminal domain F3090_RS23655 PF00149 Calcineurin-like phosphoesterase F3090_RS23660 PF01638 HxlR-like helix-turn-helix F3090_RS23665 PF05368 NmrA-like family F3090_RS23670 PF12833 Helix-turn-helix domain F3090_RS23675 PF00892 EamA-like transporter family F3090_RS23680 PF04405 Domain of Unknown function (DUF542) F3090_RS23680 PF01814 Hemerythrin HHE cation binding domain F3090_RS23685 PF00324 Amino acid permease F3090_RS23690 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase F3090_RS23690 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase F3090_RS23695 PF08525 Opacity-associated protein A N-terminal motif F3090_RS23695 PF04225 Opacity-associated protein A LysM-like domain F3090_RS23700 PF01281 Ribosomal protein L9, N-terminal domain F3090_RS23700 PF03948 Ribosomal protein L9, C-terminal domain F3090_RS23705 PF01084 Ribosomal protein S18 F3090_RS23710 PF00436 Single-strand binding protein family F3090_RS23715 PF01250 Ribosomal protein S6 F3090_RS23720 PF07338 Protein of unknown function (DUF1471) F3090_RS23725 PF07690 Major Facilitator Superfamily F3090_RS23730 PF00596 Class II Aldolase and Adducin N-terminal domain F3090_RS23735 PF01261 Xylose isomerase-like TIM barrel F3090_RS23740 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family F3090_RS23745 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 F3090_RS23750 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit F3090_RS23755 PF03611 PTS system sugar-specific permease component F3090_RS23765 PF08220 DeoR-like helix-turn-helix domain F3090_RS23765 PF00455 DeoR C terminal sensor domain F3090_RS23770 PF00326 Prolyl oligopeptidase family F3090_RS23775 PF07338 Protein of unknown function (DUF1471) F3090_RS23780 PF07338 Protein of unknown function (DUF1471) F3090_RS23785 PF00441 Acyl-CoA dehydrogenase, C-terminal domain F3090_RS23785 PF02770 Acyl-CoA dehydrogenase, middle domain F3090_RS23785 PF18158 Adaptive response protein AidB N-terminal domain F3090_RS23790 PF00588 SpoU rRNA Methylase family F3090_RS23790 PF08032 RNA 2'-O ribose methyltransferase substrate binding F3090_RS23795 PF08461 Ribonuclease R winged-helix domain F3090_RS23795 PF08206 Ribonuclease B OB domain F3090_RS23795 PF00773 RNB domain F3090_RS23795 PF00575 S1 RNA binding domain F3090_RS23795 PF17876 Cold shock domain F3090_RS23800 PF02082 Transcriptional regulator F3090_RS23805 PF00709 Adenylosuccinate synthetase F3090_RS23810 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) F3090_RS23820 PF01145 SPFH domain / Band 7 family F3090_RS23825 PF01145 SPFH domain / Band 7 family F3090_RS23825 PF12221 Bacterial membrane protein N terminal F3090_RS23830 PF01926 50S ribosome-binding GTPase F3090_RS23830 PF13167 GTP-binding GTPase N-terminal F3090_RS23830 PF16360 GTP-binding GTPase Middle Region F3090_RS23835 PF17209 Hfq protein F3090_RS23845 PF08676 MutL C terminal dimerisation domain F3090_RS23845 PF01119 DNA mismatch repair protein, C-terminal domain F3090_RS23850 PF01520 N-acetylmuramoyl-L-alanine amidase F3090_RS23855 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE F3090_RS23860 PF01256 Carbohydrate kinase F3090_RS23860 PF03853 YjeF-related protein N-terminus F3090_RS23865 PF08331 Domain of unknown function (DUF1730) F3090_RS23885 PF00497 Bacterial extracellular solute-binding proteins, family 3 F3090_RS23890 PF00929 Exonuclease F3090_RS23895 PF03193 RsgA GTPase F3090_RS23900 PF02666 Phosphatidylserine decarboxylase F3090_RS23905 PF12795 Mechanosensitive ion channel porin domain F3090_RS23905 PF12794 Mechanosensitive ion channel inner membrane domain 1 F3090_RS23905 PF00924 Mechanosensitive ion channel F3090_RS23910 PF13520 Amino acid permease F3090_RS23915 PF00152 tRNA synthetases class II (D, K and N) F3090_RS23920 PF00890 FAD binding domain F3090_RS23920 PF02910 Fumarate reductase flavoprotein C-term F3090_RS23925 PF13085 2Fe-2S iron-sulfur cluster binding domain F3090_RS23925 PF13183 4Fe-4S dicluster domain F3090_RS23930 PF02300 Fumarate reductase subunit C F3090_RS23935 PF02313 Fumarate reductase subunit D F3090_RS23940 PF08212 Lipocalin-like domain F3090_RS23945 PF00893 Small Multidrug Resistance protein F3090_RS23950 PF08085 Entericidin EcnA/B family F3090_RS23960 PF09285 Elongation factor P, C-terminal F3090_RS23960 PF08207 Elongation factor P (EF-P) KOW-like domain F3090_RS23960 PF01132 Elongation factor P (EF-P) OB domain F3090_RS23965 PF04055 Radical SAM superfamily F3090_RS23970 PF00486 Transcriptional regulatory protein, C terminal F3090_RS23970 PF00072 Response regulator receiver domain F3090_RS23975 PF00529 HlyD membrane-fusion protein of T1SS F3090_RS23975 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion F3090_RS23985 PF13737 Transposase DDE domain F3090_RS24000 PF13698 Domain of unknown function (DUF4156) F3090_RS24010 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain F3090_RS24010 PF02753 Pili assembly chaperone PapD, C-terminal domain F3090_RS24020 PF00419 Fimbrial protein F3090_RS24030 PF00118 TCP-1/cpn60 chaperonin family F3090_RS24035 PF00166 Chaperonin 10 Kd subunit F3090_RS24040 PF13520 Amino acid permease F3090_RS24045 PF04186 FxsA cytoplasmic membrane protein F3090_RS24050 PF00206 Lyase F3090_RS24050 PF10415 Fumarase C C-terminus F3090_RS24055 PF03605 Anaerobic c4-dicarboxylate membrane transporter F3090_RS24060 PF03091 CutA1 divalent ion tolerance protein F3090_RS24065 PF02683 Cytochrome C biogenesis protein transmembrane region F3090_RS24065 PF11412 Disulphide bond corrector protein DsbC F3090_RS24105 PF14883 Hypothetical glycosyl hydrolase family 13 F3090_RS24105 PF01522 Polysaccharide deacetylase F3090_RS24110 PF00535 Glycosyl transferase family 2 F3090_RS24125 PF03741 Integral membrane protein TerC family F3090_RS24135 PF00226 DnaJ domain F3090_RS24135 PF01556 DnaJ C terminal domain F3090_RS24155 PF06406 StbA protein F3090_RS24170 PF02056 Family 4 glycosyl hydrolase F3090_RS24170 PF11975 Family 4 glycosyl hydrolase C-terminal domain F3090_RS24175 PF12833 Helix-turn-helix domain F3090_RS24180 PF08946 Osmosensory transporter coiled coil F3090_RS24180 PF00083 Sugar (and other) transporter F3090_RS24185 PF08274 PhnA Zinc-Ribbon F3090_RS24185 PF03831 PhnA domain F3090_RS24190 PF06983 3-demethylubiquinone-9 3-methyltransferase F3090_RS24195 PF07702 UTRA domain F3090_RS24195 PF00392 Bacterial regulatory proteins, gntR family F3090_RS24200 PF06754 Phosphonate metabolism protein PhnG F3090_RS24205 PF05845 Bacterial phosphonate metabolism protein (PhnH) F3090_RS24210 PF05861 Bacterial phosphonate metabolism protein (PhnI) F3090_RS24215 PF06007 Phosphonate metabolism protein PhnJ F3090_RS24220 PF00005 ABC transporter F3090_RS24225 PF00005 ABC transporter F3090_RS24230 PF07969 Amidohydrolase family F3090_RS24240 PF12706 Beta-lactamase superfamily domain F3090_RS24250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3090_RS24250 PF13426 PAS domain F3090_RS24250 PF00072 Response regulator receiver domain F3090_RS24255 PF00005 ABC transporter F3090_RS24260 PF02653 Branched-chain amino acid transport system / permease component F3090_RS24265 PF13407 Periplasmic binding protein domain F3090_RS24285 PF00072 Response regulator receiver domain F3090_RS24285 PF00486 Transcriptional regulatory protein, C terminal F3090_RS24295 PF08238 Sel1 repeat F3090_RS24300 PF00375 Sodium:dicarboxylate symporter family F3090_RS24310 PF16177 Acetyl-coenzyme A synthetase N-terminus F3090_RS24310 PF00501 AMP-binding enzyme F3090_RS24310 PF13193 AMP-binding enzyme C-terminal domain F3090_RS24315 PF04341 Protein of unknown function, DUF485 F3090_RS24320 PF00474 Sodium:solute symporter family F3090_RS24335 PF00577 Outer membrane usher protein F3090_RS24335 PF13953 PapC C-terminal domain F3090_RS24335 PF13954 PapC N-terminal domain F3090_RS24340 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain F3090_RS24340 PF02753 Pili assembly chaperone PapD, C-terminal domain F3090_RS24345 PF00419 Fimbrial protein F3090_RS24350 PF04172 LrgB-like family F3090_RS24355 PF03788 LrgA family F3090_RS24360 PF03466 LysR substrate binding domain F3090_RS24360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3090_RS24365 PF00999 Sodium/hydrogen exchanger family F3090_RS24370 PF00860 Permease family F3090_RS24375 PF02798 Glutathione S-transferase, N-terminal domain F3090_RS24375 PF00043 Glutathione S-transferase, C-terminal domain F3090_RS24380 PF00376 MerR family regulatory protein F3090_RS24380 PF09278 MerR, DNA binding F3090_RS24385 PF12833 Helix-turn-helix domain F3090_RS24390 PF00563 EAL domain F3090_RS24390 PF12792 CSS motif domain associated with EAL F3090_RS24395 PF15940 Family of unknown function F3090_RS24400 PF00528 Binding-protein-dependent transport system inner membrane component F3090_RS24415 PF00005 ABC transporter F3090_RS24415 PF08402 TOBE domain F3090_RS24420 PF00753 Metallo-beta-lactamase superfamily F3090_RS24420 PF12706 Beta-lactamase superfamily domain F3090_RS24425 PF00356 Bacterial regulatory proteins, lacI family F3090_RS24430 PF00459 Inositol monophosphatase family F3090_RS24440 PF07244 Surface antigen variable number repeat F3090_RS24440 PF01103 Surface antigen F3090_RS24450 PF07519 Tannase and feruloyl esterase F3090_RS24455 PF12833 Helix-turn-helix domain F3090_RS24460 PF00593 TonB dependent receptor F3090_RS24460 PF07715 TonB-dependent Receptor Plug Domain F3090_RS24465 PF01464 Transglycosylase SLT domain F3090_RS24470 PF00436 Single-strand binding protein family F3090_RS24475 PF17760 UvrA interaction domain F3090_RS24475 PF17755 UvrA DNA-binding domain F3090_RS24475 PF00005 ABC transporter F3090_RS24480 PF04237 YjbR F3090_RS24485 PF01894 Uncharacterised protein family UPF0047 F3090_RS24490 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) F3090_RS24495 PF00155 Aminotransferase class I and II F3090_RS24500 PF00842 Alanine racemase, C-terminal domain F3090_RS24500 PF01168 Alanine racemase, N-terminal domain F3090_RS24505 PF03796 DnaB-like helicase C terminal domain F3090_RS24505 PF00772 DnaB-like helicase N terminal domain F3090_RS24510 PF08240 Alcohol dehydrogenase GroES-like domain F3090_RS24510 PF00107 Zinc-binding dehydrogenase F3090_RS24515 PF09583 Phage shock protein G (Phageshock_PspG) F3090_RS24520 PF01207 Dihydrouridine synthase (Dus) F3090_RS24530 PF01475 Ferric uptake regulator family F3090_RS24535 PF05532 CsbD-like F3090_RS24545 PF01554 MatE F3090_RS24550 PF00717 Peptidase S24-like F3090_RS24550 PF01726 LexA DNA binding domain F3090_RS24555 PF01219 Prokaryotic diacylglycerol kinase F3090_RS24560 PF01553 Acyltransferase F3090_RS24565 PF01040 UbiA prenyltransferase family F3090_RS24570 PF04345 Chorismate lyase F3090_RS24575 PF07148 Maltose operon periplasmic protein precursor (MalM) F3090_RS24580 PF02264 LamB porin F3090_RS24585 PF17912 MalK OB fold domain F3090_RS24585 PF00005 ABC transporter F3090_RS24590 PF01547 Bacterial extracellular solute-binding protein F3090_RS24595 PF00528 Binding-protein-dependent transport system inner membrane component F3090_RS24595 PF14785 Maltose transport system permease protein MalF P2 domain F3090_RS24600 PF00528 Binding-protein-dependent transport system inner membrane component F3090_RS24605 PF06146 Phosphate-starvation-inducible E F3090_RS24610 PF03313 Serine dehydratase alpha chain F3090_RS24625 PF01042 Endoribonuclease L-PSP F3090_RS24635 PF12804 MobA-like NTP transferase domain F3090_RS24635 PF00132 Bacterial transferase hexapeptide (six repeats) F3090_RS24635 PF14602 Hexapeptide repeat of succinyl-transferase F3090_RS24640 PF00342 Phosphoglucose isomerase F3090_RS24645 PF01842 ACT domain F3090_RS24645 PF00696 Amino acid kinase family F3090_RS24650 PF01758 Sodium Bile acid symporter family F3090_RS24655 PF11656 YjbD family (DUF3811) F3090_RS24660 PF00849 RNA pseudouridylate synthase F3090_RS24660 PF01479 S4 domain F3090_RS24665 PF03575 Peptidase family S51 F3090_RS24670 PF02690 Na+/Pi-cotransporter F3090_RS24675 PF02965 Vitamin B12 dependent methionine synthase, activation domain F3090_RS24675 PF02574 Homocysteine S-methyltransferase F3090_RS24675 PF02310 B12 binding domain F3090_RS24675 PF00809 Pterin binding enzyme F3090_RS24675 PF02607 B12 binding domain F3090_RS24680 PF09339 IclR helix-turn-helix domain F3090_RS24680 PF01614 Bacterial transcriptional regulator F3090_RS24685 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) F3090_RS24690 PF00463 Isocitrate lyase family F3090_RS24695 PF01274 Malate synthase F3090_RS24700 PF04204 Homoserine O-succinyltransferase F3090_RS24705 PF13673 Acetyltransferase (GNAT) domain F3090_RS24730 PF01808 AICARFT/IMPCHase bienzyme F3090_RS24730 PF02142 MGS-like domain F3090_RS24735 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain F3090_RS24735 PF02843 Phosphoribosylglycinamide synthetase, C domain F3090_RS24735 PF02844 Phosphoribosylglycinamide synthetase, N domain F3090_RS24740 PF00158 Sigma-54 interaction domain F3090_RS24740 PF00072 Response regulator receiver domain F3090_RS24740 PF02954 Bacterial regulatory protein, Fis family F3090_RS24745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3090_RS24745 PF00512 His Kinase A (phospho-acceptor) domain F3090_RS24750 PF13801 Heavy-metal resistance F3090_RS24755 PF07356 Protein of unknown function (DUF1481) F3090_RS24760 PF00216 Bacterial DNA-binding protein F3090_RS24765 PF04222 Protein of unknown function (DUF416) F3090_RS24770 PF04493 Endonuclease V F3090_RS24775 PF01208 Uroporphyrinogen decarboxylase (URO-D) F3090_RS24780 PF00293 NUDIX domain F3090_RS24780 PF09297 NADH pyrophosphatase zinc ribbon domain F3090_RS24785 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ F3090_RS24790 PF01964 Radical SAM ThiC family F3090_RS24790 PF13667 ThiC-associated domain F3090_RS24795 PF02581 Thiamine monophosphate synthase F3090_RS24800 PF00899 ThiF family F3090_RS24805 PF02597 ThiS family F3090_RS24810 PF05690 Thiazole biosynthesis protein ThiG F3090_RS24815 PF04055 Radical SAM superfamily F3090_RS24815 PF06968 Biotin and Thiamin Synthesis associated domain F3090_RS24820 PF00990 Diguanylate cyclase, GGDEF domain F3090_RS24825 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit F3090_RS24830 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit F3090_RS24835 PF03605 Anaerobic c4-dicarboxylate membrane transporter F3090_RS24840 PF04983 RNA polymerase Rpb1, domain 3 F3090_RS24840 PF04997 RNA polymerase Rpb1, domain 1 F3090_RS24840 PF04998 RNA polymerase Rpb1, domain 5 F3090_RS24840 PF00623 RNA polymerase Rpb1, domain 2 F3090_RS24840 PF05000 RNA polymerase Rpb1, domain 4 F3090_RS24845 PF04563 RNA polymerase beta subunit F3090_RS24845 PF04565 RNA polymerase Rpb2, domain 3 F3090_RS24845 PF10385 RNA polymerase beta subunit external 1 domain F3090_RS24845 PF00562 RNA polymerase Rpb2, domain 6 F3090_RS24845 PF04560 RNA polymerase Rpb2, domain 7 F3090_RS24845 PF04561 RNA polymerase Rpb2, domain 2 F3090_RS24850 PF16320 Ribosomal protein L7/L12 dimerisation domain F3090_RS24850 PF00542 Ribosomal protein L7/L12 C-terminal domain F3090_RS24855 PF00466 Ribosomal protein L10 F3090_RS24860 PF00687 Ribosomal protein L1p/L10e family F3090_RS24865 PF00298 Ribosomal protein L11, RNA binding domain F3090_RS24865 PF03946 Ribosomal protein L11, N-terminal domain F3090_RS24870 PF02357 Transcription termination factor nusG F3090_RS24870 PF00467 KOW motif F3090_RS24875 PF00584 SecE/Sec61-gamma subunits of protein translocation complex F3090_RS24880 PF00009 Elongation factor Tu GTP binding domain F3090_RS24880 PF03144 Elongation factor Tu domain 2 F3090_RS24880 PF03143 Elongation factor Tu C-terminal domain F3090_RS24905 PF00485 Phosphoribulokinase / Uridine kinase family F3090_RS24910 PF08279 HTH domain F3090_RS24910 PF02237 Biotin protein ligase C terminal domain F3090_RS24910 PF03099 Biotin/lipoate A/B protein ligase family F3090_RS24915 PF01565 FAD binding domain F3090_RS24915 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain F3090_RS24945 PF12724 Flavodoxin domain F3090_RS24950 PF02386 Cation transport protein F3090_RS24955 PF01205 Uncharacterized protein family UPF0029 F3090_RS24955 PF09186 Domain of unknown function (DUF1949) F3090_RS24960 PF00557 Metallopeptidase family M24 F3090_RS24965 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain F3090_RS24965 PF00378 Enoyl-CoA hydratase/isomerase F3090_RS24965 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain F3090_RS24970 PF02803 Thiolase, C-terminal domain F3090_RS24970 PF00108 Thiolase, N-terminal domain F3090_RS24975 PF00970 Oxidoreductase FAD-binding domain F3090_RS24975 PF00175 Oxidoreductase NAD-binding domain F3090_RS24980 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase F3090_RS24985 PF02357 Transcription termination factor nusG F3090_RS24990 PF01026 TatD related DNase F3090_RS24995 PF00902 Sec-independent protein translocase protein (TatC) F3090_RS25005 PF02416 mttA/Hcf106 family F3090_RS25010 PF03109 ABC1 family F3090_RS25015 PF02036 SCP-2 sterol transfer family F3090_RS25020 PF01209 ubiE/COQ5 methyltransferase family F3090_RS25025 PF02646 RmuC family F3090_RS25030 PF01048 Phosphorylase superfamily F3090_RS25035 PF01738 Dienelactone hydrolase family F3090_RS25040 PF01717 Cobalamin-independent synthase, Catalytic domain F3090_RS25040 PF08267 Cobalamin-independent synthase, N-terminal domain F3090_RS25045 PF03466 LysR substrate binding domain F3090_RS25045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3090_RS25050 PF00892 EamA-like transporter family F3090_RS25060 PF12146 Serine aminopeptidase, S33 F3090_RS25065 PF01810 LysE type translocator F3090_RS25070 PF04754 Putative transposase, YhgA-like F3090_RS25075 PF01810 LysE type translocator F3090_RS25080 PF09382 RQC domain F3090_RS25080 PF00270 DEAD/DEAH box helicase F3090_RS25080 PF00271 Helicase conserved C-terminal domain F3090_RS25080 PF00570 HRDC domain F3090_RS25080 PF16124 RecQ zinc-binding F3090_RS25085 PF02253 Phospholipase A1 F3090_RS25090 PF03061 Thioesterase superfamily F3090_RS25095 PF00892 EamA-like transporter family F3090_RS25100 PF01544 CorA-like Mg2+ transporter protein F3090_RS25105 PF13361 UvrD-like helicase C-terminal domain F3090_RS25105 PF00580 UvrD/REP helicase N-terminal domain F3090_RS25110 PF13419 Haloacid dehalogenase-like hydrolase F3090_RS25115 PF02899 Phage integrase, N-terminal SAM-like domain F3090_RS25115 PF00589 Phage integrase family F3090_RS25120 PF04340 Protein of unknown function, DUF484 F3090_RS25125 PF01678 Diaminopimelate epimerase F3090_RS25130 PF13627 Prokaryotic lipoprotein-attachment site F3090_RS25135 PF01491 Frataxin-like domain F3090_RS25140 PF12633 Adenylate cyclase NT domain F3090_RS25140 PF01295 Adenylate cyclase, class-I F3090_RS25145 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain F3090_RS25145 PF03900 Porphobilinogen deaminase, C-terminal domain F3090_RS25150 PF02602 Uroporphyrinogen-III synthase HemD F3090_RS25155 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase F3090_RS25160 PF07719 Tetratricopeptide repeat F3090_RS25160 PF07219 HemY protein N-terminus F3090_RS25185 PF00324 Amino acid permease F3090_RS25190 PF03808 Glycosyl transferase WecB/TagA/CpsF family F3090_RS25195 PF06899 WzyE protein, O-antigen assembly polymerase F3090_RS25200 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 F3090_RS25205 PF01943 Polysaccharide biosynthesis protein F3090_RS25210 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family F3090_RS25220 PF00483 Nucleotidyl transferase F3090_RS25225 PF16363 GDP-mannose 4,6 dehydratase F3090_RS25230 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain F3090_RS25230 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain F3090_RS25230 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain F3090_RS25235 PF02350 UDP-N-acetylglucosamine 2-epimerase F3090_RS25240 PF02706 Chain length determinant protein F3090_RS25245 PF00953 Glycosyl transferase family 4 F3090_RS25250 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain F3090_RS25250 PF07497 Rho termination factor, RNA-binding domain F3090_RS25250 PF07498 Rho termination factor, N-terminal domain F3090_RS25255 PF00085 Thioredoxin F3090_RS25260 PF00270 DEAD/DEAH box helicase F3090_RS25260 PF00271 Helicase conserved C-terminal domain F3090_RS25265 PF02541 Ppx/GppA phosphatase family F3090_RS25270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3090_RS25270 PF03466 LysR substrate binding domain F3090_RS25280 PF04474 Protein of unknown function (DUF554) F3090_RS25285 PF13361 UvrD-like helicase C-terminal domain F3090_RS25285 PF00580 UvrD/REP helicase N-terminal domain F3090_RS25300 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain F3090_RS25300 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain F3090_RS25305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3090_RS25305 PF03466 LysR substrate binding domain F3090_RS25310 PF00585 C-terminal regulatory domain of Threonine dehydratase F3090_RS25310 PF00291 Pyridoxal-phosphate dependent enzyme F3090_RS25315 PF00920 Dehydratase family F3090_RS25320 PF01063 Amino-transferase class IV F3090_RS25330 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain F3090_RS25330 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain F3090_RS25330 PF00205 Thiamine pyrophosphate enzyme, central domain F3090_RS25335 PF08046 IlvGEDA operon leader peptide F3090_RS25340 PF13335 Magnesium chelatase, subunit ChlI C-terminal F3090_RS25340 PF01078 Magnesium chelatase, subunit ChlI F3090_RS25345 PF04219 Protein of unknown function, DUF F3090_RS25350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3090_RS25350 PF03466 LysR substrate binding domain F3090_RS25390 PF01177 Asp/Glu/Hydantoin racemase F3090_RS25395 PF07715 TonB-dependent Receptor Plug Domain F3090_RS25395 PF00593 TonB dependent receptor F3090_RS25400 PF05958 tRNA (Uracil-5-)-methyltransferase F3090_RS25405 PF07226 Protein of unknown function (DUF1422) F3090_RS25410 PF00440 Bacterial regulatory proteins, tetR family F3090_RS25415 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain F3090_RS25415 PF07992 Pyridine nucleotide-disulphide oxidoreductase F3090_RS25420 PF03466 LysR substrate binding domain F3090_RS25420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3090_RS25425 PF00206 Lyase F3090_RS25425 PF14698 Argininosuccinate lyase C-terminal F3090_RS25430 PF00696 Amino acid kinase family F3090_RS25435 PF01118 Semialdehyde dehydrogenase, NAD binding domain F3090_RS25435 PF02774 Semialdehyde dehydrogenase, dimerisation domain F3090_RS25440 PF07687 Peptidase dimerisation domain F3090_RS25440 PF01546 Peptidase family M20/M25/M40 F3090_RS25445 PF00311 Phosphoenolpyruvate carboxylase F3090_RS25450 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment F3090_RS25455 PF12833 Helix-turn-helix domain F3090_RS25460 PF00923 Transaldolase/Fructose-6-phosphate aldolase F3090_RS25465 PF00465 Iron-containing alcohol dehydrogenase F3090_RS25470 PF00892 EamA-like transporter family F3090_RS25475 PF02219 Methylenetetrahydrofolate reductase F3090_RS25480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3090_RS25480 PF03466 LysR substrate binding domain F3090_RS25485 PF02627 Carboxymuconolactone decarboxylase family F3090_RS25490 PF00149 Calcineurin-like phosphoesterase F3090_RS25490 PF02872 5'-nucleotidase, C-terminal domain F3090_RS25500 PF00696 Amino acid kinase family F3090_RS25500 PF00742 Homoserine dehydrogenase F3090_RS25500 PF03447 Homoserine dehydrogenase, NAD binding domain F3090_RS25505 PF01053 Cys/Met metabolism PLP-dependent enzyme F3090_RS25510 PF01340 Met Apo-repressor, MetJ F3090_RS25515 PF01197 Ribosomal protein L31 F3090_RS25520 PF18074 Primosomal protein N C-terminal domain F3090_RS25520 PF00271 Helicase conserved C-terminal domain F3090_RS25520 PF00270 DEAD/DEAH box helicase F3090_RS25520 PF18319 PriA DNA helicase Cys-rich region (CRR) domain F3090_RS25520 PF17764 3′ DNA-binding domain (3′BD) F3090_RS25525 PF00356 Bacterial regulatory proteins, lacI family F3090_RS25530 PF05036 Sporulation related domain F3090_RS25535 PF00227 Proteasome subunit F3090_RS25540 PF10431 C-terminal, D2-small domain, of ClpB protein F3090_RS25540 PF07724 AAA domain (Cdc48 subfamily) F3090_RS25540 PF00004 ATPase family associated with various cellular activities (AAA) F3090_RS25545 PF01040 UbiA prenyltransferase family F3090_RS25550 PF03737 Aldolase/RraA F3090_RS25555 PF00365 Phosphofructokinase F3090_RS25560 PF16916 Dimerisation domain of Zinc Transporter F3090_RS25560 PF01545 Cation efflux family F3090_RS25565 PF07813 LTXXQ motif family protein F3090_RS25570 PF00072 Response regulator receiver domain F3090_RS25570 PF00486 Transcriptional regulatory protein, C terminal F3090_RS25575 PF16527 Two-component sensor protein CpxA, periplasmic domain F3090_RS25575 PF00512 His Kinase A (phospho-acceptor) domain F3090_RS25575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3090_RS25575 PF00672 HAMP domain F3090_RS25580 PF03473 MOSC domain F3090_RS25580 PF03475 3-alpha domain F3090_RS25585 PF02777 Iron/manganese superoxide dismutases, C-terminal domain F3090_RS25585 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain F3090_RS25590 PF06379 L-rhamnose-proton symport protein (RhaT) F3090_RS25595 PF02311 AraC-like ligand binding domain F3090_RS25595 PF12833 Helix-turn-helix domain F3090_RS25600 PF12833 Helix-turn-helix domain F3090_RS25600 PF02311 AraC-like ligand binding domain F3090_RS25605 PF02782 FGGY family of carbohydrate kinases, C-terminal domain F3090_RS25605 PF00370 FGGY family of carbohydrate kinases, N-terminal domain F3090_RS25610 PF06134 L-rhamnose isomerase (RhaA) F3090_RS25615 PF00596 Class II Aldolase and Adducin N-terminal domain F3090_RS25620 PF13407 Periplasmic binding protein domain F3090_RS25625 PF00005 ABC transporter F3090_RS25630 PF02653 Branched-chain amino acid transport system / permease component F3090_RS25635 PF02653 Branched-chain amino acid transport system / permease component F3090_RS25640 PF00465 Iron-containing alcohol dehydrogenase F3090_RS25645 PF05336 L-rhamnose mutarotase F3090_RS25650 PF01306 LacY proton/sugar symporter F3090_RS25655 PF16874 Glycosyl hydrolase family 36 C-terminal domain F3090_RS25655 PF16875 Glycosyl hydrolase family 36 N-terminal domain F3090_RS25660 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family F3090_RS25660 PF00356 Bacterial regulatory proteins, lacI family F3090_RS25685 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 F3090_RS25695 PF01116 Fructose-bisphosphate aldolase class-II F3090_RS25700 PF03611 PTS system sugar-specific permease component F3090_RS25710 PF00365 Phosphofructokinase F3090_RS25720 PF02634 FdhD/NarQ family F3090_RS25730 PF13247 4Fe-4S dicluster domain F3090_RS25730 PF09163 Formate dehydrogenase N, transmembrane F3090_RS25735 PF01292 Prokaryotic cytochrome b561 F3090_RS25740 PF04216 Protein involved in formate dehydrogenase formation F3090_RS25755 PF07859 alpha/beta hydrolase fold F3090_RS25760 PF09500 Putative thioesterase (yiiD_Cterm) F3090_RS25760 PF00583 Acetyltransferase (GNAT) family F3090_RS25765 PF02580 D-Tyr-tRNA(Tyr) deacylase F3090_RS25770 PF03631 Virulence factor BrkB F3090_RS25775 PF13419 Haloacid dehalogenase-like hydrolase F3090_RS25780 PF00009 Elongation factor Tu GTP binding domain F3090_RS25780 PF03144 Elongation factor Tu domain 2 F3090_RS25780 PF00679 Elongation factor G C-terminus F3090_RS25785 PF00120 Glutamine synthetase, catalytic domain F3090_RS25785 PF03951 Glutamine synthetase, beta-Grasp domain F3090_RS25790 PF00512 His Kinase A (phospho-acceptor) domain F3090_RS25790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3090_RS25790 PF00989 PAS fold F3090_RS25795 PF00158 Sigma-54 interaction domain F3090_RS25795 PF00072 Response regulator receiver domain F3090_RS25795 PF02954 Bacterial regulatory protein, Fis family F3090_RS25805 PF04055 Radical SAM superfamily F3090_RS25805 PF06969 HemN C-terminal domain F3090_RS25810 PF04220 Der GTPase activator (YihI) F3090_RS25815 PF01926 50S ribosome-binding GTPase F3090_RS25820 PF00476 DNA polymerase family A F3090_RS25820 PF01612 3'-5' exonuclease F3090_RS25820 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain F3090_RS25820 PF01367 5'-3' exonuclease, C-terminal SAM fold F3090_RS25825 PF01553 Acyltransferase F3090_RS25830 PF01323 DSBA-like thioredoxin domain F3090_RS25835 PF01636 Phosphotransferase enzyme family F3090_RS25840 PF06288 Protein of unknown function (DUF1040) F3090_RS25845 PF12804 MobA-like NTP transferase domain F3090_RS25850 PF03205 Molybdopterin guanine dinucleotide synthesis protein B F3090_RS25875 PF00392 Bacterial regulatory proteins, gntR family F3090_RS25875 PF07729 FCD domain F3090_RS25880 PF07690 Major Facilitator Superfamily F3090_RS25885 PF00356 Bacterial regulatory proteins, lacI family F3090_RS25890 PF00294 pfkB family carbohydrate kinase F3090_RS25895 PF13407 Periplasmic binding protein domain F3090_RS25900 PF02653 Branched-chain amino acid transport system / permease component F3090_RS25905 PF00005 ABC transporter F3090_RS25910 PF05025 RbsD / FucU transport protein family F3090_RS25915 PF02705 K+ potassium transporter F3090_RS25920 PF12592 Protein of unknown function (DUF3763) F3090_RS25920 PF17868 AAA lid domain F3090_RS25920 PF07728 AAA domain (dynein-related subfamily) F3090_RS25925 PF05762 VWA domain containing CoxE-like protein F3090_RS25930 PF03590 Aspartate-ammonia ligase F3090_RS25935 PF01037 Lrp/AsnC ligand binding domain F3090_RS25940 PF00258 Flavodoxin F3090_RS25945 PF13932 GidA associated domain F3090_RS25945 PF01134 Glucose inhibited division protein A F3090_RS25950 PF02527 rRNA small subunit methyltransferase G F3090_RS25955 PF03899 ATP synthase I chain F3090_RS25960 PF00119 ATP synthase A chain F3090_RS25965 PF00137 ATP synthase subunit C F3090_RS25970 PF00430 ATP synthase B/B' CF(0) F3090_RS25975 PF00213 ATP synthase delta (OSCP) subunit F3090_RS25980 PF02874 ATP synthase alpha/beta family, beta-barrel domain F3090_RS25980 PF00306 ATP synthase alpha/beta chain, C terminal domain F3090_RS25980 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain F3090_RS25985 PF00231 ATP synthase F3090_RS25990 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain F3090_RS25990 PF02874 ATP synthase alpha/beta family, beta-barrel domain F3090_RS25995 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain F3090_RS25995 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain F3090_RS26000 PF00132 Bacterial transferase hexapeptide (six repeats) F3090_RS26000 PF12804 MobA-like NTP transferase domain F3090_RS26005 PF01380 SIS domain F3090_RS26010 PF12849 PBP superfamily domain F3090_RS26015 PF00528 Binding-protein-dependent transport system inner membrane component F3090_RS26020 PF00528 Binding-protein-dependent transport system inner membrane component F3090_RS26025 PF00005 ABC transporter F3090_RS26030 PF01895 PhoU domain F3090_RS26035 PF11471 Maltoporin periplasmic N-terminal extension F3090_RS26035 PF02264 LamB porin F3090_RS26040 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) F3090_RS26040 PF00756 Putative esterase F3090_RS26045 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase F3090_RS26050 PF13419 Haloacid dehalogenase-like hydrolase F3090_RS26055 PF00860 Permease family F3090_RS26060 PF03358 NADPH-dependent FMN reductase F3090_RS26070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3090_RS26070 PF03466 LysR substrate binding domain F3090_RS26075 PF07690 Major Facilitator Superfamily F3090_RS26085 PF12631 MnmE helical domain F3090_RS26085 PF01926 50S ribosome-binding GTPase F3090_RS26085 PF10396 GTP-binding protein TrmE N-terminus F3090_RS26090 PF02096 60Kd inner membrane protein F3090_RS26090 PF14849 YidC periplasmic domain F3090_RS26095 PF01809 Putative membrane protein insertion efficiency factor F3090_RS26100 PF00825 Ribonuclease P F3090_RS26105 PF00468 Ribosomal protein L34 F3090_RS26115 PF02387 IncFII RepA protein family F3090_RS26165 PF02796 Helix-turn-helix domain of resolvase F3090_RS26165 PF00239 Resolvase, N terminal domain F3090_RS26180 PF04754 Putative transposase, YhgA-like F3090_RS26185 PF00455 DeoR C terminal sensor domain F3090_RS26185 PF08220 DeoR-like helix-turn-helix domain F3090_RS26190 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase F3090_RS26190 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase F3090_RS26200 PF13610 DDE domain F3090_RS26205 PF08447 PAS fold F3090_RS26205 PF08448 PAS fold F3090_RS26205 PF00563 EAL domain F3090_RS26205 PF00990 Diguanylate cyclase, GGDEF domain F3090_RS26240 PF02203 Tar ligand binding domain homologue F3090_RS26240 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F3090_RS26240 PF00672 HAMP domain F3090_RS26245 PF13817 IS66 C-terminal element F3090_RS26245 PF03050 Transposase IS66 family F3090_RS26245 PF13007 Transposase C of IS166 homeodomain F3090_RS26245 PF13005 zinc-finger binding domain of transposase IS66 F3090_RS26250 PF05717 IS66 Orf2 like protein F3090_RS26260 PF13610 DDE domain F3090_RS26270 PF02796 Helix-turn-helix domain of resolvase F3090_RS26270 PF00239 Resolvase, N terminal domain F3090_RS26295 PF00809 Pterin binding enzyme F3090_RS26305 PF13614 AAA domain F3090_RS26310 PF08535 KorB domain F3090_RS26310 PF06613 KorB C-terminal beta-barrel domain F3090_RS26310 PF02195 ParB-like nuclease domain F3090_RS26360 PF00145 C-5 cytosine-specific DNA methylase F3090_RS26385 PF01131 DNA topoisomerase F3090_RS26385 PF01751 Toprim domain F3090_RS26475 PF00144 Beta-lactamase F3090_RS26480 PF08212 Lipocalin-like domain F3090_RS26485 PF00893 Small Multidrug Resistance protein F3090_RS26495 PF10411 Disulfide bond isomerase protein N-terminus F3090_RS26495 PF13098 Thioredoxin-like domain F3090_RS26520 PF13610 DDE domain F3090_RS26525 PF00563 EAL domain F3090_RS26525 PF00990 Diguanylate cyclase, GGDEF domain F3090_RS26525 PF03707 Bacterial signalling protein N terminal repeat F3090_RS26530 PF05052 MerE protein F3090_RS26535 PF13411 MerR HTH family regulatory protein F3090_RS26540 PF12324 Helix-turn-helix domain of alkylmercury lyase F3090_RS26540 PF03243 Alkylmercury lyase F3090_RS26545 PF07992 Pyridine nucleotide-disulphide oxidoreductase F3090_RS26545 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain F3090_RS26545 PF00403 Heavy-metal-associated domain F3090_RS26550 PF00403 Heavy-metal-associated domain F3090_RS26555 PF02411 MerT mercuric transport protein F3090_RS26560 PF00376 MerR family regulatory protein F3090_RS26560 PF09278 MerR, DNA binding F3090_RS26565 PF02371 Transposase IS116/IS110/IS902 family F3090_RS26565 PF01548 Transposase F3090_RS26620 PF02899 Phage integrase, N-terminal SAM-like domain F3090_RS26620 PF00589 Phage integrase family F3090_RS26655 PF06122 Conjugative relaxosome accessory transposon protein F3090_RS26760 PF01343 Peptidase family S49 F3090_RS26800 PF00565 Staphylococcal nuclease homologue F3090_RS26805 PF00216 Bacterial DNA-binding protein F3090_RS26860 PF00905 Penicillin binding protein transpeptidase domain F3090_RS26870 PF13610 DDE domain F3090_RS26880 PF00563 EAL domain F3090_RS26880 PF00990 Diguanylate cyclase, GGDEF domain F3090_RS26880 PF03707 Bacterial signalling protein N terminal repeat F3090_RS26880 PF13188 PAS domain F3090_RS26885 PF05052 MerE protein F3090_RS26890 PF13411 MerR HTH family regulatory protein F3090_RS26895 PF00403 Heavy-metal-associated domain F3090_RS26895 PF07992 Pyridine nucleotide-disulphide oxidoreductase F3090_RS26895 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain F3090_RS26900 PF03203 MerC mercury resistance protein F3090_RS26905 PF00403 Heavy-metal-associated domain F3090_RS26910 PF02411 MerT mercuric transport protein F3090_RS26915 PF09278 MerR, DNA binding F3090_RS26915 PF00376 MerR family regulatory protein F3090_RS26920 PF02371 Transposase IS116/IS110/IS902 family F3090_RS26920 PF01548 Transposase F3090_RS26930 PF00809 Pterin binding enzyme F3090_RS26935 PF01636 Phosphotransferase enzyme family F3090_RS26940 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase F3090_RS26950 PF00440 Bacterial regulatory proteins, tetR family F3090_RS26950 PF02909 Tetracyclin repressor-like, C-terminal domain F3090_RS26955 PF07690 Major Facilitator Superfamily F3090_RS26970 PF02796 Helix-turn-helix domain of resolvase F3090_RS26970 PF00239 Resolvase, N terminal domain F3090_RS26980 PF13610 DDE domain F3090_RS26990 PF13610 DDE domain F3090_RS26995 PF02028 BCCT, betaine/carnitine/choline family transporter F3090_RS27005 PF13737 Transposase DDE domain F3090_RS27015 PF00356 Bacterial regulatory proteins, lacI family F3090_RS27020 PF13407 Periplasmic binding protein domain F3090_RS27025 PF00005 ABC transporter F3090_RS27030 PF02653 Branched-chain amino acid transport system / permease component F3090_RS27040 PF00294 pfkB family carbohydrate kinase F3090_RS27050 PF01850 PIN domain F3090_RS27055 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin F3090_RS27065 PF13610 DDE domain F3090_RS27080 PF13610 DDE domain F3090_RS27085 PF00302 Chloramphenicol acetyltransferase F3090_RS27095 PF13610 DDE domain F3090_RS27100 PF02796 Helix-turn-helix domain of resolvase F3090_RS27100 PF00239 Resolvase, N terminal domain F3090_RS27105 PF01526 Tn3 transposase DDE domain F3090_RS27105 PF13700 Domain of unknown function (DUF4158) F3090_RS27110 PF02371 Transposase IS116/IS110/IS902 family F3090_RS27110 PF01548 Transposase F3090_RS27145 PF02522 Aminoglycoside 3-N-acetyltransferase F3090_RS27150 PF13610 DDE domain F3090_RS27155 PF02837 Glycosyl hydrolases family 2, sugar binding domain F3090_RS27155 PF02836 Glycosyl hydrolases family 2, TIM barrel domain F3090_RS27155 PF00703 Glycosyl hydrolases family 2 F3090_RS27160 PF00440 Bacterial regulatory proteins, tetR family F3090_RS27165 PF05598 Transposase domain (DUF772) F3090_RS27165 PF01609 Transposase DDE domain F3090_RS27180 PF02371 Transposase IS116/IS110/IS902 family F3090_RS27180 PF01548 Transposase F3090_RS27185 PF00440 Bacterial regulatory proteins, tetR family F3090_RS27190 PF13533 Biotin-lipoyl like F3090_RS27200 PF00005 ABC transporter F3090_RS27210 PF01548 Transposase F3090_RS27210 PF02371 Transposase IS116/IS110/IS902 family F3090_RS27215 PF04542 Sigma-70 region 2 F3090_RS27215 PF04545 Sigma-70, region 4 F3090_RS27235 PF00582 Universal stress protein family F3090_RS27240 PF01740 STAS domain F3090_RS27240 PF00916 Sulfate permease family F3090_RS27245 PF01548 Transposase F3090_RS27245 PF02371 Transposase IS116/IS110/IS902 family F3090_RS27255 PF00589 Phage integrase family F3090_RS27260 PF01051 Initiator Replication protein F3090_RS27275 PF01609 Transposase DDE domain F3090_RS27275 PF05598 Transposase domain (DUF772) F3090_RS27285 PF00665 Integrase core domain F3090_RS27285 PF13936 Helix-turn-helix domain F3090_RS27295 PF05717 IS66 Orf2 like protein F3090_RS27300 PF13007 Transposase C of IS166 homeodomain F3090_RS27300 PF13817 IS66 C-terminal element F3090_RS27300 PF03050 Transposase IS66 family F3090_RS27300 PF13005 zinc-finger binding domain of transposase IS66 F3090_RS27315 PF13614 AAA domain F3090_RS27320 PF02195 ParB-like nuclease domain F3090_RS27320 PF18090 Centromere-binding protein HTH domain F3090_RS27330 PF00005 ABC transporter F3090_RS27335 PF18284 DNA methylase N-terminal domain F3090_RS27335 PF00145 C-5 cytosine-specific DNA methylase F3090_RS27340 PF09217 Restriction endonuclease EcoRII, N-terminal F3090_RS27340 PF09019 EcoRII C terminal F3090_RS27360 PF00717 Peptidase S24-like F3090_RS27365 PF02586 SOS response associated peptidase (SRAP) F3090_RS27370 PF01555 DNA methylase F3090_RS27380 PF07128 Protein of unknown function (DUF1380) F3090_RS27400 PF06440 DNA polymerase III, theta subunit F3090_RS27415 PF00436 Single-strand binding protein family F3090_RS27420 PF06006 Bacterial protein of unknown function (DUF905) F3090_RS27430 PF06290 Plasmid SOS inhibition protein (PsiB) F3090_RS27435 PF06952 PsiA protein F3090_RS27470 PF03230 Antirestriction protein F3090_RS27475 PF01464 Transglycosylase SLT domain F3090_RS27480 PF05261 TraM protein, DNA-binding F3090_RS27490 PF05509 TraY domain F3090_RS27495 PF05513 TraA F3090_RS27500 PF07178 TraL protein F3090_RS27505 PF05309 TraE protein F3090_RS27515 PF03743 Bacterial conjugation TrbI-like protein F3090_RS27530 PF09676 Type IV conjugative transfer system lipoprotein (TraV) F3090_RS27535 PF11130 F pilus assembly Type-IV secretion system for plasmid transfer F3090_RS27540 PF09677 Type-F conjugative transfer system protein (TrbI_Ftype) F3090_RS27545 PF12477 Sex factor F TraW protein N terminal F3090_RS27550 PF06834 TraU protein F3090_RS27560 PF09673 Type-F conjugative transfer system pilin assembly protein F3090_RS27565 PF06986 Type-1V conjugative transfer system mating pair stabilisation F3090_RS27575 PF13728 F plasmid transfer operon protein F3090_RS27580 PF06122 Conjugative relaxosome accessory transposon protein F3090_RS27585 PF07916 TraG-like protein, N-terminal region F3090_RS27595 PF05818 Enterobacterial TraT complement resistance protein F3090_RS27600 PF12615 F sex factor protein N terminal F3090_RS27600 PF10412 Type IV secretion-system coupling protein DNA-binding domain F3090_RS27605 PF18272 single-stranded DNA binding TraI N-terminal subdomain F3090_RS27605 PF07057 DNA helicase TraI F3090_RS27605 PF08751 TrwC relaxase F3090_RS27605 PF18340 DNA relaxase TraI 2B/2B-like domain F3090_RS27615 PF05857 TraX protein